BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (216 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 433 e-120 UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12... 160 2e-38 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 160 3e-38 UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=... 159 8e-38 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 158 2e-37 UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_A6V170 Probable two-component response regulator n=1 Ta... 153 4e-36 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 153 5e-36 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 151 1e-35 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 150 3e-35 UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 145 1e-33 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 144 3e-33 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 142 8e-33 UniRef50_UPI000197BDC0 two component LuxR family transcriptional... 141 2e-32 UniRef50_UPI00016AF7F9 capsular synthesis regulator component B ... 140 3e-32 UniRef50_C3K5C3 Putative response regulator, receiver domain n=1... 139 6e-32 UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_B6VKY7 Pvp response regulator (Two-component response r... 137 3e-31 UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece... 137 3e-31 UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10... 136 5e-31 UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa... 135 7e-31 UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ... 133 4e-30 UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece... 132 8e-30 UniRef50_B2U714 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei... 129 6e-29 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B2SXK9 Two component transcriptional regulator, LuxR fa... 125 9e-28 UniRef50_B5WJ97 Two component transcriptional regulator, LuxR fa... 123 3e-27 UniRef50_B4STE5 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_Q2L102 Putative two-component response regulator of cap... 122 1e-26 UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ... 120 3e-26 UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=... 120 4e-26 UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25... 117 2e-25 UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ... 117 4e-25 UniRef50_Q145Q9 Two component transcriptional regulator, LuxR fa... 116 6e-25 UniRef50_Q1LG72 Two component transcriptional regulator, LuxR fa... 112 1e-23 UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR fa... 111 1e-23 UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa... 111 2e-23 UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ... 108 2e-22 UniRef50_UPI00016A3B5C two component transcriptional regulator, ... 106 4e-22 UniRef50_Q2W0G1 Response regulator containing a CheY-like receiv... 106 6e-22 UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=... 105 1e-21 UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin... 105 1e-21 UniRef50_B4ELF5 Two-component regulatory system, response regula... 105 2e-21 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 104 2e-21 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 104 2e-21 UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_B1T388 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud... 103 3e-21 UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular... 103 4e-21 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 103 5e-21 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 103 6e-21 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 103 6e-21 UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Provide... 102 7e-21 UniRef50_A9AIC6 Two component transcriptional regulator, LuxR fa... 102 1e-20 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 101 2e-20 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 101 2e-20 UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat... 101 2e-20 UniRef50_Q2T904 Capsula synthesis response regulator transcripti... 100 3e-20 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 100 4e-20 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 100 5e-20 UniRef50_B2JLH9 Two component transcriptional regulator, LuxR fa... 100 5e-20 UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa... 100 6e-20 UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa... 100 6e-20 UniRef50_Q470N3 Two component transcriptional regulator, LuxR fa... 99 7e-20 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 99 8e-20 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 99 1e-19 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 99 1e-19 UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=... 98 2e-19 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 98 2e-19 UniRef50_Q7NVE2 Capsula synthesis response regulator transcripti... 98 2e-19 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 97 5e-19 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 96 9e-19 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 96 9e-19 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 96 1e-18 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_B1T3D5 Two component transcriptional regulator, LuxR fa... 96 1e-18 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 95 1e-18 UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta... 95 1e-18 UniRef50_Q1VWI3 Transcriptional regulator n=1 Tax=Psychroflexus ... 95 2e-18 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 94 3e-18 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Ta... 94 3e-18 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 94 3e-18 UniRef50_C6VZM4 Two component transcriptional regulator, LuxR fa... 94 4e-18 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 93 7e-18 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 92 8e-18 UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 ... 92 1e-17 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 92 1e-17 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 92 2e-17 UniRef50_B3RA82 Response regulator protein; Response regulator r... 91 2e-17 UniRef50_A3K169 Response regulator n=1 Tax=Sagittula stellata E-... 91 2e-17 UniRef50_C5A924 Two component transcriptional regulator, LuxR fa... 91 2e-17 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 91 3e-17 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 91 3e-17 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 91 3e-17 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 91 3e-17 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 91 3e-17 UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Prot... 91 4e-17 UniRef50_Q04VJ6 Receiver component of a two-component response r... 90 4e-17 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 90 4e-17 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 90 5e-17 UniRef50_D2QUB6 Two component transcriptional regulator, LuxR fa... 90 5e-17 UniRef50_Q31FU6 Two component transcriptional regulator, LuxR fa... 90 5e-17 UniRef50_D2QUK2 Two component transcriptional regulator, LuxR fa... 90 5e-17 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 90 5e-17 UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellov... 90 6e-17 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 90 6e-17 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 89 7e-17 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 89 7e-17 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 89 9e-17 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 89 1e-16 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 89 1e-16 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 89 1e-16 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 89 1e-16 UniRef50_C6Y2F0 Response regulator receiver n=1 Tax=Pedobacter h... 89 1e-16 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 89 1e-16 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 89 1e-16 UniRef50_B4STD4 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_C7PEC4 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba... 88 2e-16 UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip... 88 2e-16 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 88 2e-16 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 87 3e-16 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 87 3e-16 UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ... 87 4e-16 UniRef50_UPI00017463AF response regulator receiver domain protei... 87 4e-16 UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14... 87 4e-16 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 87 4e-16 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 87 5e-16 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 87 5e-16 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 87 5e-16 UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator rece... 87 5e-16 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 87 5e-16 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 87 6e-16 UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh... 86 6e-16 UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis Re... 86 6e-16 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 86 7e-16 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 86 7e-16 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 86 8e-16 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 86 8e-16 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 86 9e-16 UniRef50_C5BYM0 Two component transcriptional regulator, LuxR fa... 86 1e-15 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 86 1e-15 UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR fa... 86 1e-15 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 85 2e-15 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 85 2e-15 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 85 2e-15 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 85 2e-15 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 85 2e-15 UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavoba... 84 3e-15 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 84 3e-15 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 84 3e-15 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 84 4e-15 UniRef50_C4ZL17 Two component transcriptional regulator, LuxR fa... 84 4e-15 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 84 4e-15 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 84 5e-15 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 83 6e-15 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 83 6e-15 UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algorip... 83 6e-15 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 83 6e-15 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 83 8e-15 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 83 8e-15 UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=... 83 8e-15 UniRef50_A8H3B9 Two component transcriptional regulator, LuxR fa... 83 8e-15 UniRef50_A4YPG2 Putative two-component response regulator, lux-R... 82 8e-15 UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrh... 82 9e-15 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 82 1e-14 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 82 1e-14 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 82 2e-14 UniRef50_Q21Y82 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 ... 82 2e-14 UniRef50_D2L4S6 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 82 2e-14 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 81 2e-14 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 81 2e-14 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 81 3e-14 UniRef50_Q07MS7 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 80 3e-14 UniRef50_C6X5T9 Regulatory protein, LuxR:Response regulator rece... 80 4e-14 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 80 4e-14 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 80 4e-14 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 80 4e-14 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 80 4e-14 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 80 4e-14 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 80 4e-14 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 80 5e-14 UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnoba... 80 5e-14 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 80 5e-14 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 80 5e-14 UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa... 80 5e-14 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 80 5e-14 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 80 6e-14 UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 80 6e-14 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 80 6e-14 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 80 6e-14 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 80 6e-14 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 80 7e-14 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 80 7e-14 UniRef50_C7PJC5 Two component transcriptional regulator, LuxR fa... 80 7e-14 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_A6EP24 Two-component response regulator n=1 Tax=unident... 79 8e-14 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 79 8e-14 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_C6CGT1 Two component transcriptional regulator, LuxR fa... 79 9e-14 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 79 9e-14 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 79 1e-13 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 79 1e-13 UniRef50_Q26C67 Transcriptional regulator, LuxR family n=2 Tax=F... 79 1e-13 UniRef50_A7V9C7 Putative uncharacterized protein n=2 Tax=Bactero... 79 1e-13 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 79 1e-13 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_C7PUZ6 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 79 1e-13 UniRef50_C7LUF3 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS 79 1e-13 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 79 1e-13 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 79 1e-13 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 79 1e-13 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP Sbjct: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL Sbjct: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK Sbjct: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD Sbjct: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 >UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas RepID=Q4KHP5_PSEF5 Length = 220 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 133/216 (61%), Gaps = 8/216 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +I+ADDHPI L G+R LEQ + + +VGE +AL + +++ VL+TD MP Sbjct: 7 NKLRIILADDHPIFLIGLRAVLEQDDSLAIVGEASSPSALAQLMQEIECDVLVTDFMMPA 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 ++ DG+ LI+ ++R P L I+V+TM N+P + ++LDL + G++ K +LP A+A Sbjct: 67 EQQNDGLRLIEQLRRRHPDLPIVVVTMLNHPGLFRSILDLGVTGLLSKASLADELPTAIA 126 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIAKKL 175 ++ K + +++ + L AG G R LSP+E EV+RL A G V EIA +L Sbjct: 127 RARQHKPYIAQAIKQALSL--AGEVGPDRLVSSDQLSPRELEVIRLLAAGHAVGEIAAQL 184 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 NRS +T+S+QK SAM KLG+ ++ AL Y+ LS Sbjct: 185 NRSKQTVSAQKVSAMRKLGLSSEAALYIYVQEHGLS 220 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 2/202 (0%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ ++IADDHP++L G+R++L + VV EDST+L++ + KL V +TD SMPG Sbjct: 2 NIRIVIADDHPVILAGVREALGNEPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGG 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 KYGDG+ L+ +++R F + ++VLT +L+++ + IV K ++L A+ A Sbjct: 62 KYGDGVALLGFLRRRFAGIPLVVLTGVGGTQVLASIRKAGVACIVAKADPISELASAIRA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +KG+ + V R L G G+ L+ +E+EVLRL AEG TEIA +L RS +TI Sbjct: 122 ARKGEGYLSADVERQLASRPEG--GEAHLTKREAEVLRLIAEGLSQTEIAAQLQRSRQTI 179 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 S+QK SAM KLG++ + Y Sbjct: 180 STQKHSAMRKLGMQRPAEIFEY 201 >UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK Length = 220 Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 128/202 (63%), Gaps = 4/202 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ V+IADDHP+ + G++ +L + + +V D+T+L++ L VL+ D MP Sbjct: 5 SVRVVIADDHPVSVHGMKAALSAMPTIEIVAVTSDTTSLVDMLDAHACDVLVLDYVMPSG 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 KYGDG TL+ Y+ R FP+L + +TM N+PA+ A+ +L + IV K + L A+ A Sbjct: 65 KYGDGQTLLSYLSRRFPTLRYVTVTMLNSPAVFRALQELGVNSIVSKSDPMSHLIAAIHA 124 Query: 123 LQKGKKFTPESVSRLLEKI-SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G ++ +++ LLE+ SA G LS +E+E++RLF EG+ VTEIA+KL+RS KT Sbjct: 125 AHSGGRYLSPTIASLLERTESAAG---ATLSKRETEIVRLFREGYKVTEIAEKLHRSKKT 181 Query: 182 ISSQKKSAMMKLGVENDIALLN 203 IS+QK +AM KLGV +D L+ Sbjct: 182 ISAQKLAAMRKLGVTSDAELIR 203 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 125/207 (60%), Gaps = 5/207 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDHP L G++ L + + + G +ST LI L VL++D +MPG Sbjct: 5 QIRVVLADDHPATLGGVQHGLSSVPTIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPGG 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL-PKALA 121 YGDGI L Y++R++P++ ++VLTM +NPA++ +L L I IV K A L P A Sbjct: 65 AYGDGIALFSYLQRNYPAVKLVVLTMLDNPAVIKGLLGLGISCIVSKSDAVDHLIPAVHA 124 Query: 122 ALQKGKKFTP--ESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A G ++P E + R L S+ D + LS +E EV+RL+A G V EIA+KL+R Sbjct: 125 AATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKLSR 184 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S KTIS+QK AM KLGVE DI LL Y Sbjct: 185 SKKTISTQKARAMQKLGVEKDIDLLRY 211 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDHP++LFG ++L + + + VV ST L+ L VL+TDL+MPG + Sbjct: 5 IRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQ 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 YGDG+ LI Y++R+FP L I+VLTM N A+L + +L + +V K + + A+ + Sbjct: 65 YGDGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHV 124 Query: 124 QKGKKFTPESVSRLLE--KISAGGYGDKR-LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + ++ SV L+ +++ GG D+ LS +E EV+RLF G + EI+++LNRSIK Sbjct: 125 SRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIK 184 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSS 207 TIS+QK +AM KLG+E D L Y S Sbjct: 185 TISTQKNTAMRKLGLERDSELFQYAQS 211 >UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS Length = 231 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N++V++ADDHP ++ GIR L + + +ST L+ L + VL++D SMP Sbjct: 12 NISVLLADDHPGIISGIRHELSSELEILLKASVSNSTDLVKKLDEGGFDVLVSDYSMPTG 71 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL-PKALA 121 +YGDG+ L YI R FP+L ++VLTM +N AIL A+ + IV K L P A Sbjct: 72 QYGDGLNLFGYISRRFPNLGLVVLTMLDNSAILQALGKVSNISIVSKADPVLHLVPAIHA 131 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKLN 176 A G F+P ++S LEK++AG G + LSPKESEV+RL+A G + EIA KLN Sbjct: 132 AYTGGTYFSP-AISERLEKMNAGVMGGEGKSPGVLSPKESEVVRLYAAGLRIDEIAAKLN 190 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 RS KTIS+QK AM KLG+E DI L+ Y Sbjct: 191 RSKKTISTQKVKAMHKLGIERDIDLMKY 218 >UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V170_PSEA7 Length = 213 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 130/213 (61%), Gaps = 9/213 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DDH + L G+R L + + +VG+ +D+ L+ L +LITDL MP + Sbjct: 4 RVLLVDDHALTLIGMRCLLGAFDDLQIVGQAQDADGLLTQLDTHPCDLLITDLMMPDSQQ 63 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ L++ ++R +P L IIV+TM NNPA++S++L L I G+V K+G DLPKA+ Sbjct: 64 ADGLRLVQKVRRRYPQLQIIVVTMLNNPALISSLLKLGIRGLVSKRGVLNDLPKAIR--H 121 Query: 125 KGKK-FTPESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G++ F S+ LL+ + A +G + L+P+E EVLRL+ G + EIA +L RS Sbjct: 122 GGRRPFLSHSIGHLLD-VGAAEHGKPLASLEELTPREVEVLRLYGSGLAIGEIALRLCRS 180 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +TIS+QK SAM KLG++ + L Y+ L+ Sbjct: 181 KQTISAQKSSAMRKLGLDTNAGLYLYIQEHGLA 213 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDHP V+ G R L + VV +ST L+ L VL++D +MPG + Sbjct: 7 IRIVIADDHPAVVIGARYELSATNTLAVVASANNSTELMETLANHPCDVLVSDYAMPGTE 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL-AA 122 YGDG+ + I + +P+L I+V+TM N L A+LDL I +V K + L A+ AA Sbjct: 67 YGDGLAMFSAILKRYPNLRIVVMTMMENAVALRALLDLGIACVVSKSDMTSHLTMAIHAA 126 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+ +P S+ R+L G LS +E EV+RLFA G V +IA++L+RS KTI Sbjct: 127 YTNGRYLSP-SMDRILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTI 185 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 S+QK SAM KLG+E D+ L+ Y Sbjct: 186 STQKSSAMQKLGIERDVDLVRY 207 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 9/209 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +IIADDHP+V G R +E VVGE + + AL+ L +L+TD SMPG Sbjct: 2 SLRIIIADDHPVVRIGTRAVIESSGVGRVVGEADSAQALMTLLGSQPCDLLVTDYSMPGS 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG +I I+R P L +++L+++NN AIL VLD + G+V K + +LP+A+ A Sbjct: 62 PQADGFAMIGMIRRRHPDLPVLMLSVSNNLAILRMVLDSGVLGLVDKSSSMDELPQAIQA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGY-----GD-KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + +G+ + S L E++ A G GD K LSP+E EVLRL G V EI+ +L+ Sbjct: 122 VYRGQPYISRS---LRERVEAAGSWRMREGDGKPLSPREVEVLRLLGTGMTVKEISLQLH 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYL 205 +S+ TIS QK AM+KLG++ D L +YL Sbjct: 179 KSVSTISRQKGDAMLKLGLKGDAELFDYL 207 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VI+ADDHP+++FG+R++L + VV + D AL L + VL+TD SMP Sbjct: 3 IRVIVADDHPLIIFGVRQALASAPGIRVVADAPDPGALTELLRNVPCDVLVTDFSMPCGA 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ +++ FP + ++VLTM N ++ ++ D+ + GIV K+ ++LP +AA Sbjct: 63 TPDGLAMLTSLRQRFPHVRVVVLTMLENAGLMVSMQDVGVLGIVNKRDDLSELPAVIAAA 122 Query: 124 QKGKKFTPESVS---RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + ++ SV R E + + ++LSP+E+EV+R++ G +E+A+ L+RSI Sbjct: 123 FRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSIN 182 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 TIS+QK +AM KLGV ND L +Y Sbjct: 183 TISTQKTNAMRKLGVSNDAELFDY 206 >UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LGB9_RALME Length = 300 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 9/212 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLE--QIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 + +++ADDHP++ IR ++ Q W V GE +T L + L V++TD MP Sbjct: 81 TLRILLADDHPVITAAIRARVQSSQTGW-EVCGEATSATELQQQVDLLQPDVVVTDYHMP 139 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DG+ LI ++R PS+S++VLTM NP +L +LD+ + G+++K ++ A+ Sbjct: 140 GPTELDGVRLITSLRRRHPSISVVVLTMITNPLVLRTILDVRVHGLLIKDSPLAEIMTAI 199 Query: 121 AALQKGKKFTPESVSRLLEK------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 Q+G + +S R L + G G++R S +E EVLRL+ G VTEIA Sbjct: 200 GRAQRGFTYIGKSALRALAPTELRTMLPCGRDGEQRPSAREMEVLRLYLTGRTVTEIATT 259 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLS 206 L RS+KTIS QK AM KLGV ND L ++ Sbjct: 260 LCRSVKTISRQKNCAMQKLGVTNDRELFECVA 291 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDHP VL GI LE + +VG ++ST +I+ L K + VL+TD SMPG Sbjct: 6 LRILIADDHPAVLAGIESVLEDKHEIEIVGRAKNSTEIISFLKKNECDVLVTDYSMPGGA 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 YGDG+ ++ I++ FPS+ I++LTM N I+ ++ + I IV K + L A+ A Sbjct: 66 YGDGLVMLNVIRKRFPSVKIVMLTMIENIGIIKSLTNQGIYRIVHKTDSLGSLLPAIYAA 125 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK-RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +F S S+LL G LS +E EVL LF G V+EIAKKL RSIKT+ Sbjct: 126 YTDGQFISPSASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTV 185 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 S+ K + M KLG+ DI L+ Y Sbjct: 186 STHKVAVMNKLGIRKDIDLIRY 207 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 6 VIIADDHPIVLFGIRKSLEQIE-WVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +I+ADDHPI+L G+R + I+ +V E + + L + L + + +LITD SMP D Sbjct: 5 IILADDHPIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQHECDLLITDFSMPNDDN 64 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ +IK ++R +P+L IIVLT +N +L A++ + I G++LK+ +L + + Sbjct: 65 VDGMAMIKQLRRKYPNLPIIVLTQVHNLGVLQALMQIGINGLLLKKSVIAELANTVKKVL 124 Query: 125 KGKKFTPESVSRLLEKISAGGYGDK-RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + ++V LL + Y LS KE EV+RL A G VT++A LNRS+KTIS Sbjct: 125 SGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVKTIS 184 Query: 184 SQKKSAMMKLGVENDIALLNY 204 +QK +AM KLG+++D L +Y Sbjct: 185 TQKTNAMQKLGLKSDSELFHY 205 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 120/202 (59%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ V+IADDHP+VL G+R L + V++VGE D L+ L ++ITD +MP Sbjct: 2 SVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQ 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ ++ I+ +PS+ +IVLTM +NP ++ + ++ K+G +LP+ALAA Sbjct: 62 PAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G+ F G ++LSP+E EV+RL A G +T+IA + RSIKT+ Sbjct: 122 VYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKTV 181 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 S+ K +AM KLG+++D+ L Y Sbjct: 182 STHKHNAMGKLGLKSDVDLFMY 203 >UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0 Length = 217 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 131/209 (62%), Gaps = 5/209 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ DDHPIVL G++ +L Q ++++G + L L K + V++TD MP Sbjct: 1 MKKLKLVLVDDHPIVLSGLKDTLSQSMNLDILGAYTQDAELFAFLKKNEVDVIVTDYMMP 60 Query: 61 GD-KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 + + DG I++++R +P++++IVLTM +NP I+ + D + +V K+ DL KA Sbjct: 61 NNTQSSDGQNYIQFLRRQYPNIAVIVLTMVSNPMIVQMLYDSGVSAVVSKEAPLGDLMKA 120 Query: 120 LAALQKGKKF-TP-ESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +G+++ P ++ L+ +A D K LSP+E EVLRLF +G + +IAK+L Sbjct: 121 ITLAGQGRQYRVPVADMTTTLKSRNAVTLNDRVKTLSPRELEVLRLFVQGKPIVDIAKQL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 NRS KTIS QK +AM KLGV+N+ AL++Y Sbjct: 181 NRSDKTISLQKNAAMRKLGVDNNQALISY 209 >UniRef50_UPI00016AF7F9 capsular synthesis regulator component B n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AF7F9 Length = 225 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 125/213 (58%), Gaps = 10/213 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +N++IADDHP V+ G+R L+ ++ +N VGE +ST L+ L + +LITD +MP Sbjct: 1 MKPVNIVIADDHPAVIRGMRADLDALQMINAVGEVSNSTELVALLERQPCDILITDYAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G K+GDG++L+ +++R +P L IIV T +N A+ +A+L I I K PT K + Sbjct: 61 GGKFGDGLSLLDFLRRRYPDLVIIVYTAIDNAALRAAILQCGIYAIFNKVEPPT---KVI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDK-------RLSPKESEVLRLFAEGFLVTEIAK 173 A++ + S G ++ +L+ E+EV+RL+ G + EIA+ Sbjct: 118 HAIRDVCTHLAAHHAPHARATSLGKITERSIPNALPKLTRLEAEVVRLYVSGLSIKEIAE 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLS 206 + NR+ +TIS QK+SA KL ++ DI L+ Y+S Sbjct: 178 QRNRTKQTISFQKESAKRKLNIKRDIDLIRYMS 210 >UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C3_PSEFS Length = 211 Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VIIADDHPIV G + +E VVGE + L+ + + VL+TD +MPG++ Sbjct: 2 LRVIIADDHPIVRIGQKVVIEANGKCKVVGEADGPDQLLALVQRTPCDVLVTDFAMPGNQ 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG L+ + R P L +I++TM N A L + IV K + +LP A+ A+ Sbjct: 62 QADGYGLLGLLHRQHPDLPVILVTMFANVATLRSSFSHGARAIVAKSASARELPLAIKAV 121 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G F E + LE+ G GD+ +LS KE EV+R+ A G V++IA ++NRSI Sbjct: 122 CEGHTFVSECLRLQLEE---AGVGDQQGMPQLSGKEREVVRMLASGMTVSQIAARVNRSI 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 TIS QK +AM +L + D+ L Y S + P Sbjct: 179 STISKQKSTAMSRLCISTDVDLFAYARSSGMVP 211 >UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=A9BU04_DELAS Length = 217 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 4/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + + DDH +VL G++ LEQ + VV F ++L+ V++TD SMPGD Sbjct: 5 LRIAVVDDHAVVLLGVKDFLEQDPNLQVVATFSTPSSLMQYARSNPLDVVLTDYSMPGDD 64 Query: 64 -YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 YGDG+ + Y+ RHFP + ++VLT +NP I+SA+ D + G++LK+ T + AL Sbjct: 65 VYGDGLRYVDYLIRHFPDIKVLVLTTVSNPMIISALYDAGVAGVLLKEDPLTQIMAALQC 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 ++ ++ S + + +R LSP+E EVLR FA G +TEIA +L RS+ Sbjct: 125 VRLNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIAARLRRSV 184 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLS 206 KT+S QK SAM KL V+++ L + + Sbjct: 185 KTVSLQKNSAMRKLNVDSNQDLAAFCA 211 >UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR family n=34 Tax=Proteobacteria RepID=A9AQJ5_BURM1 Length = 224 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 3/202 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDHP G+ + L + + +VG +ST L+ L + + VL+ D MPG K Sbjct: 6 VRVMVADDHPSSAIGMSRVLAESSTIELVGTVSNSTDLVAALEEKPSDVLVLDYVMPGGK 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GDG+ L+ +++R +P+L I+ +TM +NP++L A+ + I+ K A + L A+ A Sbjct: 66 FGDGLVLLSFLQRRYPALRIVTITMIDNPSVLHAIRRQGVGCILSKSDAISHLVGAVHAA 125 Query: 124 QKGKKFTPESVSRLLEKISAG-GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + + LL+ SAG ++RL+ +E EV+RL+A G V EIA +L+RS +TI Sbjct: 126 FVCADYQSPHIRHLLD--SAGSSVTERRLTTREIEVVRLYAAGLTVGEIASQLHRSKQTI 183 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 SSQK SAM KLG+ D L+ + Sbjct: 184 SSQKASAMKKLGIVRDADLIRF 205 >UniRef50_B6VKY7 Pvp response regulator (Two-component response regulator bvg protein) n=2 Tax=Photorhabdus RepID=B6VKY7_PHOAA Length = 208 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 5/206 (2%) Query: 6 VIIADDHPIVLFGIRKSLEQI-EWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 VIIADDHP+ L G+R L + E VVGE D TAL + L + + +LITD +MPGD Sbjct: 5 VIIADDHPVFLLGLRTVLATLPENYQVVGEAHDVTALFSLLEEKEVDMLITDFNMPGDNQ 64 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ +I I+ +PSL I+V+TM ++ I+++++D ++ I+ K +L K L + Sbjct: 65 IDGLRMISRIRERYPSLPIVVITMISDRKIIASLIDYKVKAILNKNSLSHELVKGLYSTT 124 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 + P + LE S G K L+ KE EV++L +G V +IA +L R+ +TIS+ Sbjct: 125 GCHE--PYLSEQFLE--SPGEEVVKALTSKELEVIKLLGQGLSVNDIAARLYRTKQTISA 180 Query: 185 QKKSAMMKLGVENDIALLNYLSSVTL 210 QK SAM KLG+ N+ AL NYL V L Sbjct: 181 QKISAMKKLGLNNEAALYNYLHQVGL 206 >UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21 Tax=pseudomallei group RepID=C4I5I0_BURPS Length = 242 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 4/205 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++I+ADDHP ++ GI +L + ++V G +ST L++ L + +LITD +MPG Sbjct: 15 IDLIVADDHPALIAGIEHALSKSSAISVAGTASNSTELVDLLARERCDILITDYAMPGGS 74 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GDG+ L+ +++RH P L IIV T +NPA+++++ L IV K +L + A+ Sbjct: 75 HGDGLGLLSFLRRHHPDLKIIVFTAIDNPALIASMARLGARAIVNKMDHIDNLIATVQAV 134 Query: 124 QKGKKFTPESVSRLL-EKISAGGYG---DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G P + ++ G +++LS +E E++RL+ G V EIA L+RS Sbjct: 135 YAGASCLPAGIGAFASSRLPVDGEAPEIERQLSARELEIVRLYVSGLSVNEIAAYLHRSK 194 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 + +S+QK +AM KLG+E D L Y Sbjct: 195 QAVSTQKMNAMRKLGIERDAGLFRY 219 >UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria RepID=A6V5P3_PSEA7 Length = 221 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 10/217 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + +++ADDHPIV G+ LE+ VVGE + + L++ + D H+ ITD SMP Sbjct: 6 MSKLKIVLADDHPIVRMGVCDMLERDPRFEVVGEASNPSELVSLYRQADPHIAITDYSMP 65 Query: 61 GD-KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 GD +YGDG+ LI Y+ R+FP +++ TM +N IL ++ D + G+VLK G +L A Sbjct: 66 GDERYGDGLKLIDYLLRNFPRTRVLIFTMVSNRLILDSLYDHGVAGVVLKSGELDELLLA 125 Query: 120 LAALQKGKKFT------PESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 L + + + + P +V +++ RLS KE EVLR F G V +IA+ Sbjct: 126 LDVVLQNRIYRGAHMIDPANVLTSRDEVENRF---ARLSMKEFEVLRHFVSGNNVCDIAR 182 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L RS+KT+S+QK SAM KL V +D AL+ + L Sbjct: 183 LLKRSVKTVSTQKISAMRKLEVNSDQALMTFCVRANL 219 >UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LDE9_RALME Length = 214 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 115/202 (56%), Gaps = 1/202 (0%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDHP+V+ GIR+ L VVG ST L+ L VL+TD SMPG Sbjct: 2 IQVLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTELLRLLDTTQCDVLVTDYSMPGSA 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GDG+ +++ I+R P++ I+V+TM +NPA+L + I I+ K L A+ A Sbjct: 62 TGDGLPMLQLIRRRHPAVRIVVITMLDNPALLRNIQKAGISVILSKSDHLGHLAPAIRAA 121 Query: 124 QKGKKFTPESVSRLLEKIS-AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G + +V LL S GG + +LS +E EV+R A G + EIA++ NRS KTI Sbjct: 122 FVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKTI 181 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 S+QK AM KLG+ +D L Y Sbjct: 182 SAQKSMAMRKLGLTSDYELYQY 203 >UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B1Z6J3_BURA4 Length = 225 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 123/212 (58%), Gaps = 5/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + VI A+D P+ L G+ + +N+VG S LI+++ ++ V++ D ++ G+ Sbjct: 5 GVEVIFANDRPLSLAGMEYVAGKANAINLVGVCRSSDTLIDSISRIHCDVVLIDYAIRGN 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ L+ Y++R +P + ++VL + NP I+ A+LDL +E +V K + A+ A Sbjct: 65 GKREGMALLGYLRRTYPQVGMVVLVTHENPVIIQAILDLGVESLVSKLDDVGHIVTAIHA 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G + + R L S+GG G + RLSP+E EV+RL+ G + +IA +LNR Sbjct: 125 CYGGGSYLSPQIKRSLA--SSGGDGRRPPLRLSPREIEVIRLYLSGMTINQIAGRLNRGK 182 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 TISSQK SAM KLGV+ D+ L+ Y + + L+ Sbjct: 183 PTISSQKISAMKKLGVKGDVELVRYATCLDLT 214 >UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6 Tax=Ralstonia RepID=B2UFA9_RALPJ Length = 222 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 5/206 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDHP V+ +R+ + + VVGE ++ L+ L ++ + ITD +MPG + Sbjct: 5 IQLVIADDHPGVVAAVRRLVSGVHGFEVVGEASNADELLAVLARVRCDLAITDYAMPGSR 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 YGDGI L++++ R P L ++VLTM A++S +L I+ IV K P + + + A Sbjct: 65 YGDGIILLEFLMRRHPDLRVMVLTMLETRALMSNILRAGIKVIVSKSDEPQHILEGMQAA 124 Query: 124 QKGKKF-TPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ + +P ++LL E A +L +E EVLR++ G V+EIA++LNRS Sbjct: 125 VDGRIYLSPLLNAKLLCRNGEPQPAHDDPVAKLGKRELEVLRMYVTGKTVSEIAQQLNRS 184 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 +KTISSQK++AM KL + N+ AL ++ Sbjct: 185 VKTISSQKQTAMRKLELGNEAALFDF 210 >UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria RepID=Q4KAJ3_PSEF5 Length = 217 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 126/212 (59%), Gaps = 9/212 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL---PKLDAHVLITDL 57 M + V +ADDHP+VL + L++ VV +AL+ L P++D V+ITD Sbjct: 1 MKKIRVALADDHPLVLAAVSDLLKKTRQYEVVAAVTTPSALVQQLSDDPRID--VVITDY 58 Query: 58 SMPGD-KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 M GD +GDGI L+ Y+ RHFP + ++VLTM +NP I++A+ D+ + ++ K+ ++L Sbjct: 59 FMEGDPTFGDGIRLVTYLIRHFPRVQVLVLTMMSNPMIVAALYDIGVRSVLPKRHDMSEL 118 Query: 117 PKALAALQKGKKFTPES-VSRLLEK--ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 AL +++G+ P S V L + + G L+PKE EVLR F G + +IA Sbjct: 119 LSALENVRQGRIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAA 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYL 205 L RS+KT+S+QK SA+ KL +++D AL+ + Sbjct: 179 NLKRSVKTVSAQKISAIRKLNLDSDQALVAFC 210 >UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM Length = 199 Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 118/202 (58%), Gaps = 8/202 (3%) Query: 14 IVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKY 73 ++ G++ L++ ++ +G +DST L+ L + VL+TD +MPG +GDG+ L+ Y Sbjct: 1 MIRLGVQSVLDEAPALHCIGAAQDSTELVALLQREPCDVLVTDYAMPGGAHGDGLALLDY 60 Query: 74 IKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPES 133 + HFP L I+V+T + P++L+ + + GIV K + A+ A ++F S Sbjct: 61 LGAHFPQLRIVVMTGLDQPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMAAYANRRFLSPS 120 Query: 134 VSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAM 190 V+ +L++ +R LSP+E EV+ LF G V EIA+KL+R +T+S+QK +AM Sbjct: 121 VAEILDRRE-----QRRATALSPREQEVVELFIAGLSVAEIARKLDRKKQTVSTQKNNAM 175 Query: 191 MKLGVENDIALLNYLSSVTLSP 212 KLG+E D LL + + + L P Sbjct: 176 RKLGIERDAELLTFAADLGLKP 197 >UniRef50_B2U714 Two component transcriptional regulator, LuxR family n=5 Tax=Ralstonia RepID=B2U714_RALPJ Length = 215 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 8/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++++ADDHP++L G+ ++ Q VV + D L+ L +D +V++TD ++ G+ Sbjct: 5 LSIVLADDHPVILMGLAAAIGQFPQQQVVAQAHDGRELMQVLAHIDCNVIVTDYNLGGEP 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L+ +++ P I+V TM +NPA+L + + + GIV K A+ A Sbjct: 65 AFDGMQLLVRLRQQHPRCGIVVCTMVHNPALLRGMRQIGVAGIVSKNDDFVHAGHAVMAA 124 Query: 124 QKGKKF-TPESVSRLLEKISAGG---YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G ++ +P R+LE+ G G +RLS +E EVLRL+A G V++IA+ L S+ Sbjct: 125 ARGVRYDSP----RILEEAGLGSNDRNGFERLSAREREVLRLYAAGTAVSDIAQMLGSSV 180 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+S+QK A+ KLG+ +I L Y + L+ Sbjct: 181 KTVSTQKAVALRKLGLVREIDLFQYARASGLT 212 >UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME Length = 215 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 118/205 (57%), Gaps = 5/205 (2%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 V++ DDHPI++ +R L +I + V ++N L + ++ITD S+ ++ G Sbjct: 7 VLVCDDHPIIVIALRSELARIGQFSEVVTASSVNEILNALNDPEVGIVITDFSL--NEAG 64 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 DG+ LI IKR P +++IV +MN +P + ++ V K D+ +A + Sbjct: 65 DGLQLIGRIKRMRPDVAVIVFSMNASPPAVRDMIAAGASAFVSKTCGTRDVAEACRVVLA 124 Query: 126 GKKF-TPESVSRLLEKISAGG--YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+KF P S++ LL++ G +RLSP+E EVLRL A+G + EIA + NRS KTI Sbjct: 125 GRKFVAPASLAHLLDQDDGGTPQAALQRLSPREREVLRLLAQGLSLREIAARFNRSRKTI 184 Query: 183 SSQKKSAMMKLGVENDIALLNYLSS 207 S QK +AM KLG+ +D+ L YL+S Sbjct: 185 SVQKCAAMAKLGLTHDMELGRYLAS 209 >UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem domain,LuxR C-term domain n=1 Tax=Cupriavidus taiwanensis RepID=B3RBJ1_CUPTR Length = 223 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 4/208 (1%) Query: 1 MNN--MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 MN+ + V +ADDHP+V+ +R L++ V + E + T L+ L + A + ITD Sbjct: 9 MNDRVLRVALADDHPLVMAALRDCLQRSARVQISAECRNGTELLGTLARHPADIAITDFC 68 Query: 59 M-PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 M GD DG L+ + RH P+ ++V++ N AI+ + L + G V K+ ++ Sbjct: 69 MGHGDASLDGFNLLSRLARHHPATRVVVISARANAAIVRRAMKLGVRGYVSKEDPLEEVV 128 Query: 118 KALAALQKGKK-FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +A A G+ F +V L++ + G + + +E EV+RLFA+G +TEIA KL Sbjct: 129 RACAHAAFGRGCFCSPAVQAALQRAALAGTPAREPTQRELEVIRLFAQGAQLTEIAAKLG 188 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 RS+ T+SSQK AM KLGV+ + AL+ Y Sbjct: 189 RSVSTVSSQKTVAMRKLGVQTNTALIRY 216 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ADDHPI+L G R +EQ + VVGE DS+ L++ L + V+ITD SMP Sbjct: 4 RVVLADDHPIMLLGCRLLIEQ-NGMEVVGEARDSSELMSILAHVACDVVITDFSMPNTGR 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ ++ ++R +L +IVLT N +L A+L+ + GIV K ++L A+ Sbjct: 63 ADGLAMLSTLRREHGALPVIVLTNMANAGLLRAMLNEGVLGIVEKGAEKSELFAAVRTAL 122 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G + + R L K+ +R L+P+E EVLRL A G TE+ + L+R+IKT Sbjct: 123 RGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRLLASGKSPTEVGQMLHRTIKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +S K SA KLG+++D L Y+ ++ L+ Sbjct: 183 VSWAKTSAKRKLGLKSDAELYEYVVNLGLN 212 >UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8 Length = 217 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDHP VL GIR +L +VGE ++L+ + K VL+TDL+MP D GD Sbjct: 1 MLADDHPFVLLGIRATLIAHGGFTIVGEATSPSSLVQLMEKASCDVLVTDLTMP-DASGD 59 Query: 67 ---GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ LI+ I+ +P + I+VLT N AIL +++ + G++ K + +L A+ A Sbjct: 60 ADDGLRLIRRIRSGWPEVHIVVLTSLTNAAILRSIMSDGVIGMLNKSESMDELAAAIRAA 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ + S+ + L + S G + LSP++SEV+R+F G ++EIA+ L R ++ Sbjct: 120 GAGRSYVSRSILQTLAEASGEPLGMSPMRHLSPRQSEVIRMFVRGKSISEIARDLGRDVR 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+S QK+ AM KLGV ND L ++ + L+ Sbjct: 180 TVSRQKRDAMAKLGVSNDPGLFAFVRAYGLA 210 >UniRef50_B2SXK9 Two component transcriptional regulator, LuxR family n=6 Tax=cellular organisms RepID=B2SXK9_BURPP Length = 230 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 5/210 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +I+ADDHP V+ G+R +LE + VV + D +LI L VL+TDLSMP Sbjct: 15 SIRIILADDHPFVILGVRAALEMQAGITVVDQATDPVSLIECLRSTPCDVLVTDLSMPDH 74 Query: 63 KYG--DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + DG+ L++ I+ +P L I+V+T NPAIL A++ +V K + +L +A+ Sbjct: 75 SFAVDDGLNLVRRIRSCWPQLRIVVMTTLTNPAILRAIVSDGAVSMVGKAESMDELRQAV 134 Query: 121 AALQKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A + G + S+ L + RL+ K++EV+RL G +++IA L Sbjct: 135 LAARDGHAYLGRSIIEALAHPQDCECERPPAPRLTGKQAEVVRLLVSGQSISDIAAALGC 194 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSS 207 +T++ QK+ AM KLGV ND L +Y+ + Sbjct: 195 DRRTVTRQKREAMAKLGVTNDPGLFSYVRA 224 >UniRef50_B5WJ97 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. H160 RepID=B5WJ97_9BURK Length = 195 Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 7/182 (3%) Query: 29 VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTM 88 ++VVGE E+STA++ L + + VL++D +PG Y DG +L+ ++R +PS +I +T Sbjct: 11 LSVVGEAENSTAIVELLREKEVDVLLSDFEIPGKMYRDGNSLMTLLRRTYPSTKVIFVTT 70 Query: 89 NNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRL-----LEKISA 143 NP +L AV+ G++LK +P ++ A+ ++ +G+ + SV R+ E+ A Sbjct: 71 LTNPLLLRAVIKSRAHGVLLKNDSPEEVISAVRSVSRGQFYIAASVRRITGINDCEEFEA 130 Query: 144 GGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 G LS +E EVLRL+ G ++EIA +RS++T+S+Q+K M KLG ND L Sbjct: 131 RKVGH--LSAREGEVLRLYVSGMSISEIAALSHRSLQTVSTQRKQGMKKLGFTNDRELFE 188 Query: 204 YL 205 Y+ Sbjct: 189 YM 190 >UniRef50_B4STE5 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STE5_STRM5 Length = 208 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 3/204 (1%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +IIADDHP+VL GIR L Q ++VVG D L+ + D ++TDLSMPG Sbjct: 4 RIIIADDHPVVLHGIRVVL-QTHLMDVVGSACDGAELLQLVDNNDCDAVLTDLSMPG-AG 61 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG LI ++ P L ++VLT +P +L +L I G+V K T+LP+AL+A Sbjct: 62 PDGPELIDALRARHPGLPVVVLTGARHPGLLDGLLREGISGLVDKCADFTELPQALSAAL 121 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKR-LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G+ F + + L+ + LS +E EVL L A G V +A++ RS KTIS Sbjct: 122 AGQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLLAAGLSVNAVAERCGRSPKTIS 181 Query: 184 SQKKSAMMKLGVENDIALLNYLSS 207 QK A KLG++N+ L +YL + Sbjct: 182 RQKAEAKRKLGLQNNQELFDYLQT 205 >UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1 Tax=Bordetella avium 197N RepID=Q2L102_BORA1 Length = 231 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 1/206 (0%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDHP +L GI+ + VVG +S LI+ L K+ V++TD +MPG + Sbjct: 3 IRIILADDHPALLAGIQHQFSNFPTLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGR 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + DG+ LI Y++R +P++ +IV T +N AI + L + ++ K L A+ A Sbjct: 63 FSDGMALILYLRRIYPNIKLIVFTAMDNGAISQELAKLGVHAVLNKVNDTNHLVSAIHAA 122 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + + +R + A K LS +E EV+RL+ G V EIA +L+R+ +TIS Sbjct: 123 YAGSTYYRPNQAR-TPRPEAEQSEFKPLSRRELEVIRLYISGLSVQEIADQLHRTKQTIS 181 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVT 209 SQK SAM KL + D L + ++ Sbjct: 182 SQKSSAMRKLDITRDADLFRFAYEIS 207 >UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14 Length = 212 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +IIADDHP+VL G + +E+ VVG+ E+ L L +L+TD +MP Sbjct: 2 QLRIIIADDHPVVLLGAKIIVEKGGSGLVVGQAENPEELEAILKSTPCDLLVTDFAMPNS 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + DG+ ++K ++R P L IIVLT N +++ +L+L I+G+V K +L +A+ Sbjct: 62 RR-DGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNLGIQGVVEKNADQFELIEAIKK 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + + +++ L +S + D+ +LSPKE EV+RL A G ++A+KL+RSI Sbjct: 121 VARHQRYISPFFREALADVSILNF-DRPSVKLSPKELEVVRLLAIGLTQAQVAEKLSRSI 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KTIS K SA KLG++ D L Y + LS Sbjct: 180 KTISWTKVSAKTKLGIKTDAELYQYARNTHLS 211 >UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY57_COMTE Length = 201 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 6/194 (3%) Query: 15 VLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYI 74 +L G+ L+Q + + ST L+ L K ++I D MP +YGDGI I Y+ Sbjct: 1 MLMGLGDLLKQNIHLTLTATASSSTELVAALTKSLPDIVIVDYHMPDSQYGDGIKFIGYL 60 Query: 75 KRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTP--- 131 R F L +IVLTM +NP I+ A+ ++G+V KQ P+++ KA+ + G +TP Sbjct: 61 LRQFEGLKVIVLTMLSNPMIVKALYKAGVKGVVFKQDDPSEVFKAIRLVSLGNIYTPPSF 120 Query: 132 -ESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAM 190 E+ L ++ + K L+P+E EVLR + G + EIA++LNRSIKT+SSQK +AM Sbjct: 121 LETNVSLQHQMLQERF--KSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAM 178 Query: 191 MKLGVENDIALLNY 204 KL +++ L+ + Sbjct: 179 RKLEAKSNQELMAF 192 >UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia RepID=C4KLT2_BURPS Length = 221 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 5/208 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM- 59 ++ V++ADDHPIVL + + + +VV AL++ + + + ++++TD +M Sbjct: 6 LHTRKVVVADDHPIVLRAVTDYVNSLPGFHVVASVSSGDALLSAMREQEVNLVVTDFTMH 65 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 + DG+ LI ++ R + IIV TM N ++S + + + G+V K+ +L + Sbjct: 66 QANDDKDGLRLISHLMRAYERTPIIVFTMLTNSGVISQLCRMGVAGLVGKEEEIAELGRV 125 Query: 120 LAALQKG--KKFTPESVSRL--LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 ++ +G + +P RL + I G L+PKE EV+RLF G +T+IA+ L Sbjct: 126 CVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSLTDIARTL 185 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLN 203 NRS+ T+S+QK+SAM KL V+ ++ L+N Sbjct: 186 NRSLGTVSTQKRSAMRKLHVDTNVDLIN 213 >UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM Length = 223 Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 9/204 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 + IADDHP+VL G R +E VV E + +L+ L + +++TD SMP Sbjct: 4 RIAIADDHPLVLLGTRIVIEAGGRHRVVAEARCAESLLAVLAEEPVDLVVTDFSMPDGGR 63 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG +++ ++R+ P + +I+ TM N L+ + + G+V K + +A+ + Sbjct: 64 SDGQAMLQALRRNHPKVPVILATMVTNATTLNMAMRTGVRGLVCKGSGVDGIRRAVDTVL 123 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKR----LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G + ++ L+ G +R LSPKE EVLRL+ G +TEIA +L R++ Sbjct: 124 SGGIYLDPELAHCLQD-----AGRERSLSVLSPKELEVLRLYVSGPSITEIAAQLRRTVS 178 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 TIS Q+ SAM KLG+ ND L Y Sbjct: 179 TISRQRISAMRKLGISNDAELFAY 202 >UniRef50_Q145Q9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=Q145Q9_BURXL Length = 225 Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 117/217 (53%), Gaps = 12/217 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + VI+ADDH V G+++ L+ + + VGE D+ L L V+++D++MPG Sbjct: 14 QKIRVIVADDHDCVRVGVKQMLQSVPHIEFVGEAADTHGLAELLDACACDVVVSDITMPG 73 Query: 62 DKYG-DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G + + ++ + R P ++VLTM + +L+ +L + + GIV K+ T L A+ Sbjct: 74 IHGGSNAVPFLRRLLRGRPHPCVVVLTMICHAHMLTGLLHIGVGGIVDKRETVTALIDAI 133 Query: 121 AALQKGKKFTPESVSRLLE------KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A G + +E ++ AG LS +E E+ +L+ +G V +IA + Sbjct: 134 EAAFSGHVYLSAHARAAIEMADAPPQLRAG-----MLSAREWEIFQLYVQGLAVHQIAAR 188 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L RS KTIS+QK+SAM KLG+E + L++Y + L+ Sbjct: 189 LQRSGKTISTQKRSAMRKLGLETEADLIDYARQIGLA 225 >UniRef50_Q1LG72 Two component transcriptional regulator, LuxR family n=3 Tax=Cupriavidus RepID=Q1LG72_RALME Length = 217 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 6/207 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM-PG 61 + V +ADDHP+V+ +R L++ V E + + L++ L + V +TD SM G Sbjct: 5 TIRVALADDHPLVVVALRDCLQRTPGFQVTCECTNGSELVDALTQNPVDVAVTDFSMGHG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL- 120 D DG L++ + R P I+V++ NP ++S + L V K+ ++ +A Sbjct: 65 DTSLDGFNLLRKLHRRHPDTRIVVVSAQTNPGVVSRAMKLGARAFVSKEDELDEIVRACI 124 Query: 121 -AALQKGKKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G ++P S+ +L+ +A L+ +E +V+RL+A+GF +TEIA KL R Sbjct: 125 HVTVSNGHFYSP-SIRAVLDSATAAATAAPATDLTLRELDVVRLYAQGFQLTEIANKLGR 183 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+ TISSQK AM KL V+ + L+ Y Sbjct: 184 SVSTISSQKTVAMRKLSVQTNTDLIRY 210 >UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LLE4_RALME Length = 213 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM-PGD 62 +++++ DDH IV GI + L+Q ++G F S + L ++I D ++ P D Sbjct: 3 ISIMVLDDHEIVHQGIVRVLQQNSAFAILGTFTRSRDFVQALRNKAPDLVIIDYALEPSD 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI +I+ I+R +P + I+VL+ +++P ++ + +G +K G+ D+ A+A Sbjct: 63 --ADGIGVIRMIRRQYPGIKILVLSAHDSPVTIALAMKAGADGYCIKNGSIADITAAIAK 120 Query: 123 LQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +G P V+ L E G L+ KE EVLR F +G V EIA K Sbjct: 121 ILRGASHIPAQVASLSVFGKEQGEGAPGSGGLTAALTEKEREVLRCFLDGMTVNEIAAKF 180 Query: 176 NRSIKTISSQKKSAMMKLGVEND 198 +RS KT+S K+SA+ KLG+ +D Sbjct: 181 SRSKKTVSGHKQSALRKLGIRSD 203 >UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JCS9_BURP8 Length = 236 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + IIADDHP+VL + + + +VG+ DS+ L ++ +++ DL MPG Sbjct: 11 IRTIIADDHPLVLLAMENLMSGFPNIEIVGKATDSSELFAEAQRVKCELVVMDLYMPGGL 70 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GDG+ +++ K P + ++VLTM + L V+ L + +V K+ + A+ Sbjct: 71 HGDGVEMVRQFKERHPDVVVVVLTMETSADALQKVIALGVGAVVSKRDRIDLIHVAIITA 130 Query: 124 QKGKKFTPESVSRLLEKISAG---GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + + ++ LL + Y + LS +E EVL +A G VTEIA +L RS+K Sbjct: 131 LARECYVGPAIRALLADATLSRRIDYVRQVLSRRELEVLTHYATGRGVTEIAMRLGRSVK 190 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 TIS+QK +AM KL +++D L + Sbjct: 191 TISAQKCTAMRKLSLQSDADLFRF 214 >UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC Length = 223 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 112/202 (55%), Gaps = 7/202 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +NV++ADDHP+V G+ L +NVVG + L+ L + VLI D S G Sbjct: 12 RRINVVVADDHPVVSTGVAAILTAEMDINVVGVASTISELLLLLQQQPCDVLICDYSFSG 71 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAIL-SAVLDLDIEGIVLKQGAPTDLPKAL 120 D+ DG+ L K ++R+ P ++I+VLT + + A+L S V++ + G + K + D + Sbjct: 72 DQQPDGVALFKRLRRNHPHVAIVVLTAHQDIALLVSRVMNTGVAGFLRK--SSQDFARLA 129 Query: 121 AALQK---GKKFTPESVS-RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A +++ G+ F +V+ LLE A + LS +E E+ R+ G VTEIA N Sbjct: 130 AIVRRVHAGQTFVDPAVAVDLLEVGQAAQTSIESLSERELEIFRMLGRGMSVTEIAMHTN 189 Query: 177 RSIKTISSQKKSAMMKLGVEND 198 RSIKTIS QK AM KLG ++ Sbjct: 190 RSIKTISHQKMRAMHKLGARSE 211 >UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex RepID=A2WHU0_9BURK Length = 204 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 4/177 (2%) Query: 31 VVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNN 90 ++G +ST LI L + VL+TD +MPG +YGDG++++ ++R FP L I+VLT Sbjct: 1 MIGTARNSTELIELLERSPCDVLMTDYAMPGGEYGDGLSMLALLRRRFPLLKIMVLTAGI 60 Query: 91 NPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGD-- 148 +PAI+S + + I ++ K L A+ + G + L ++ D Sbjct: 61 SPAIVSEIARIGIRSVLNKVDDIGHLITAIHTVFAGAAYYSPGAQNLAHAAASEYMPDTM 120 Query: 149 --KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 L+ +E+EVLRL+ G + EIA ++ R+ +TIS+QK+ AM KLGVE D+ L Sbjct: 121 SGTSLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFR 177 >UniRef50_UPI00016A3B5C two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5C Length = 213 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 4/207 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M ++ + IADDHPI+L I+ +E + + L+ L + H+++TDL+MP Sbjct: 1 MTSITLSIADDHPIILHSIKLLVEHQPLLQLRHVCNSGRELLAALARDPTHLVLTDLTMP 60 Query: 61 --GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 G Y DG+ L++ ++ P +IVLT +N AIL+ + L +V K ++ + Sbjct: 61 APGGSY-DGLALLRAVRAVAPHSGLIVLTAQSNAAILTKAMQLGARALVGKNDPAHEIIR 119 Query: 119 ALAALQKG-KKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A + G ++ + +E + D L+ KE +V+RL A G ++EIA + R Sbjct: 120 ACMQVHAGATHHVSPAMRKRMEDGRSTHICDSNLTQKELDVVRLTANGLSLSEIALQYRR 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+ TISSQK +AM KLGV + L+ Y Sbjct: 180 SVSTISSQKSTAMRKLGVHSTADLIRY 206 >UniRef50_Q2W0G1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W0G1_MAGSA Length = 225 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 7/202 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++ DDH IV IR++LE + W++VVGE +D A ++ + ++I DLSMPG Sbjct: 16 VRTVLVDDHGIVRTAIRRALEGMAWIDVVGEADDGVAALHLIDDAKPDLIILDLSMPGL- 74 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ +I +KR P+ I+VLT + + L ++ LK G DL A+ Sbjct: 75 --DGMDIIPLVKRRNPASRIVVLTGTQDGTTMKRAFALGVDAYTLKTGGWQDLETAIGEA 132 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR----LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+++ S +++ GG LS +E +VL+L AEG+ ++A L S+ Sbjct: 133 MAGRRYISPSAGLVVDGGEEGGLAAGSAVAPLSGRERQVLKLLAEGYTNQKVAGILGISV 192 Query: 180 KTISSQKKSAMMKLGVENDIAL 201 KT+ +++ M KLGV +AL Sbjct: 193 KTVDRHRENIMNKLGVRTPVAL 214 >UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=Burkholderia RepID=A9APD3_BURM1 Length = 234 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 1/214 (0%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ + A D P+ L G+ + + +V + + L+ +D HVL+ D S+ GD Sbjct: 5 SVRTVFAYDWPLALVGMEHVVAAGCAIELVAAYPTAAELVAAFDTVDCHVLLVDYSLRGD 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ L++ + R P + ++ L N +P IL ++L IV K + A+ + Sbjct: 65 GRIEGLALLERLTRVRPEVGVVALVRNESPVILRSILAHGATSIVSKGDDVGHIVTAVHS 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G ++ V R L+ S +LS +E EV+RL+ G + IA++LN+ +T+ Sbjct: 125 AYSGGRYLSPLVRRALDA-SGSEPAPAKLSSREVEVIRLYLSGIPIKAIAQRLNKGKQTV 183 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S+QK SAM KLG ND+ L+ Y + + L A D Sbjct: 184 SAQKISAMKKLGAHNDVELIRYAAGLGLGGATLD 217 >UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia RepID=D0FMI8_ERWPY Length = 214 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 4/206 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V ++DDHP ++ ++ + + E L+ L ++ITD S+ Sbjct: 3 SRFTVAVSDDHPHIIHSLKMLFSNNDKFTIATETGCGKDLLAVLASAQTDIVITDFSLSS 62 Query: 62 DKYG-DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + DG I+ + FP + I++LT N AIL D ++ IV K D A Sbjct: 63 KRSAIDGFAKIRALSGRFPLVKIVLLTSQKNIAILRKTCDYGVKAIVSKSDPVEDTVIAC 122 Query: 121 AAL--QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + Q G F+ S+S + +S G L+PKE EV+RLF+ G+ ++EIA++ NR+ Sbjct: 123 HHVMNQSGYYFS-SSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIARRQNRT 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 I T+S+QK +AM +LGV +++ L+ Y Sbjct: 182 ISTVSTQKYNAMRRLGVSSNVELIRY 207 >UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5 Tax=Burkholderiaceae RepID=B4ELF5_BURCJ Length = 238 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 28/223 (12%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM-PGD 62 + V+I DDH +V GI L + + V F S LI L A V++ D ++ PG+ Sbjct: 8 IRVVILDDHAVVQHGIASYLTEKIGIEVAASFAKSRDLIRWLEAHHADVVLLDYTLGPGE 67 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ L+K + FP I++++ ++ PA +S + G K +L A+ Sbjct: 68 I--DGLNLVKLVNTRFPDCRILMMSSSDTPATVSMTMRAGALGFFGKSEDLGELAHAIRV 125 Query: 123 LQKGKKF-------------TPESVSRLLEKISAGGYG----------DKRLSPKESEVL 159 + G+ + TP+ R+ + +AGG G D RLSP+E EVL Sbjct: 126 VANGRPYISAELAARMESSATPDP--RMADTKAAGGDGTLTPESGPSADLRLSPREHEVL 183 Query: 160 RLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 R F G V++IA K +RS KTIS+QK+SA KLG+ +D L Sbjct: 184 RCFLAGMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAELF 226 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 10/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V +ADDHPIVL GIR L + +VGE + + + D V + D+SMPG Sbjct: 3 DRIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ L + + P ++VLT++ + A + +L G +LK+ A DL +A+ Sbjct: 63 L---NGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVR 119 Query: 122 ALQKGKKFTPESVSR--LLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G + SV+ + + GD + LSP+E++VLRL A+GF EIA++ Sbjct: 120 AVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARR 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 + S+K+I + K A KLG+ ++ Y ++ Sbjct: 180 FDLSVKSIETYKARAAEKLGLRTRAEIIRYAAA 212 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQ-IEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + ++IADDHPIV GIR LEQ EW V GE ++ + + A ++I D S+P Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWW-VCGEADNGETAVRLAREHAAKIVILDYSLP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ + I+R P +++ TM+ + +++ L G +LK ++L A+A Sbjct: 63 --VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVA 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 AL +G+ + VS + + G D + L+ +E EV+R +EG IA +L S Sbjct: 121 ALIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVS 180 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 +KT+ S + +AM KLG+ N + L+ Y Sbjct: 181 VKTVDSHRTTAMRKLGLRNAVDLVRY 206 >UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC Length = 246 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 113/205 (55%), Gaps = 5/205 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+++AD +P+++ G+R +E + +V E + + + L + VLI D + D Sbjct: 33 INIVVADSYPMIVQGLRHVFSSVENMRIVAEAHTLSGMASLLSSCECDVLICDYAFGDDP 92 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPT-DLPKALAA 122 DG+ +++ I+R+ P++ II+L + + VL + V+K + LPK + Sbjct: 93 GPDGMRMLETIRRNHPNVKIILLAELRDGLSVQRVLKKGVSAFVVKSSDDSLSLPKIVDK 152 Query: 123 LQKGKKFT-PESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +GK++ P +L G R LSP+E +V+RL + G V EIA KL+RS Sbjct: 153 VMRGKRYVDPGIAGDMLCDSGRGSDWQARTNLLSPRELDVVRLLSRGMAVGEIAVKLSRS 212 Query: 179 IKTISSQKKSAMMKLGVENDIALLN 203 KTIS+QK +AM K GV+ ++ L++ Sbjct: 213 RKTISTQKANAMKKFGVKTNVDLVD 237 >UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK Length = 210 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 3/205 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M N ++ DDH +V G +I ++++G +E S LI + VL D + Sbjct: 1 MQNFTAMVIDDHYLVRQGFEAVARRIPGLSIIGSYERSRDLIAAIELCPPQVLYLDFVLH 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 D G G+TLI+ IKR FP + IIV++ + N I+S + G K + +DL +A Sbjct: 61 TDDVG-GLTLIRLIKRRFPIVKIIVVSAHANAGIVSLSIRAGASGFCFKTSSVSDLTEAT 119 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + + GK + P+ V D + L+P+E EV+ L G +++I+KKL R Sbjct: 120 SRVLGGKVYIPKFVDECAVNRDLNDRPDAFEILTPREREVVNLILIGMSISDISKKLVRD 179 Query: 179 IKTISSQKKSAMMKLGVENDIALLN 203 KTIS K++A KLGV +D L + Sbjct: 180 RKTISGHKQTAYRKLGVSSDAELFS 204 >UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7V7K0_PSEA8 Length = 212 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 13/207 (6%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAH-VLITDLSMPGDK 63 ++IAD P++ + +++ L + V+ DS +L+ L L +LIT+L +PG + Sbjct: 9 GLVIADSFPVMQWALQRYLSEECGRQVLAVVGDSDSLVERLADLPPESILITELGLPGQR 68 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI L++++ RH P + ++V ++ + P + AVL + K+ L AL + Sbjct: 69 SRDGIHLVEWLTRHCPQMKVMVYSVFSAPLLAKAVLRSGASAYISKRSPLETLKAALECM 128 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G+ F L + + K LSP E ++LR A G V+EIA++ RS+ TIS Sbjct: 129 ALGQTF-------LDPGLHPQRHTGKPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTIS 181 Query: 184 SQKKSAMMKLGVEND-----IALLNYL 205 + KK+AM+K+G+ +D + ++N+L Sbjct: 182 THKKNAMVKIGLNSDAELIALGVMNWL 208 >UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms RepID=Q0K0R3_RALEH Length = 216 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 9/207 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V+IADDHP++ ++ +L +I V + L L +++TD +M Sbjct: 6 ISVVIADDHPVIQLAVKATLSEIPNVRISAICSSGKELFAALQTQQPDLIVTDFTMERSH 65 Query: 64 YGD-GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL-- 120 D G+ L+ +++ P I+V TM N +L+ + ++ + IV K P L + Sbjct: 66 VNDDGLRLVHRLRQSRPHTPIVVFTMLTNGGLLTRIKEMGVAAIVGKNEEPGILRQICVD 125 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNR 177 A G++ +P +R+ SAG + LSP+E EV+R+FA G +TEIA L+R Sbjct: 126 AITGTGQRLSPGIAARMS---SAGALVNGTASPLSPREIEVVRMFATGSTLTEIAGYLHR 182 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+ TI++QK+SAM KL + + L+ Y Sbjct: 183 SLATIATQKRSAMRKLNITTNADLVTY 209 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 17/212 (8%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEF---EDS-TALINNLPKLDAHVLITD 56 M + V+I DDH +V G+R L + + VVGE ED+ A + + P V++ D Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPD----VMLMD 56 Query: 57 LSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 + MP + DGIT +++++ P + +I+LTM ++ + +LD + GIV K D Sbjct: 57 VHMP--QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKH---DDS 111 Query: 117 PKALAALQKGKKFTPESVSRLLEKISAG----GYGDKRLSPKESEVLRLFAEGFLVTEIA 172 + +AA+Q G+ P R ++ +A +RLSP+E+EVL L A+G+ E+A Sbjct: 112 SEIVAAIQHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVA 171 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L+ S+KT+ + ++ M ++G+ + AL+ Y Sbjct: 172 DALHISVKTVETHRQHIMRRIGLHSRAALVRY 203 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VIIADDH +V G+R LE+ VVGE T + + +L HV++ DLSMPG Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LI+ ++ P+L I+VLTM+ + G + K+ A T+L +AL + Sbjct: 61 --NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKV 118 Query: 124 QKGKKFTPESVSR-----LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G + +++ L EK A G LS +E EV R +G +T+IA L S Sbjct: 119 AAGGTYVSPAMAEKLALGLQEKPDAPHEG---LSDRELEVFRRIVDGESLTQIAAALCVS 175 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 KT+S+ K M KL + +D AL+ Y Sbjct: 176 AKTVSTYKMRLMEKLQLRSDAALVRY 201 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 4/202 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ +DH +V G+R LE V VVGE + L K+ A V I D+S+P Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPD-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G GI L + ++ FP L ++ L+M+ + + L +G V K +L A+ A+ Sbjct: 60 -GTGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAV 118 Query: 124 QKGKKF-TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+++ P RL ++ + LSP+E EVLRL A+G E+A+KL S KT+ Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 ++ ++ M KLG+ + LL Y Sbjct: 179 ATYRERGMEKLGLASRSELLRY 200 >UniRef50_B6XCS1 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XCS1_9ENTR Length = 160 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 5/152 (3%) Query: 59 MPGD-KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 MP + + DG I++++R +P+++++VLTM +NP I+ + D ++ +V K+ +L Sbjct: 2 MPNNTQSSDGQNYIQFLRRKYPNIALVVLTMISNPMIIQTLYDNNVNAVVSKEAPLPELI 61 Query: 118 KALAALQKGKKFTPESV--SRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAK 173 KA+ +GK++ V + ++ +A + K LSP+E EVLRLF +G + EIAK Sbjct: 62 KAITLAGQGKQYRQPIVDLTTTMKSRNASTLDERVKTLSPRELEVLRLFVQGKPIVEIAK 121 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYL 205 LNRS KTIS QK +AM KL VEN+ AL++Y Sbjct: 122 LLNRSDKTISLQKNAAMRKLRVENNQALISYC 153 >UniRef50_A9AIC6 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=A9AIC6_BURM1 Length = 229 Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 3/207 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V IADDHP+V+ + + + +V + +ALI +L ++ ++I D SM Sbjct: 16 MMAITVAIADDHPVVVSLLVQLFQADPSFHVEHCCNEGSALIESLARVPTDIVIVDYSMS 75 Query: 61 -GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 GD+ DG L++ ++ P ++ TM NP + +A + L + IV K+ +L +A Sbjct: 76 RGDRPVDGFALLRKLREVAPKAGRVLFTMQRNPTVFAAAMRLGVAAIVSKEDEVAELLRA 135 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNR 177 +Q G R + + D L+ KE +V+RLF G + +IAK+L R Sbjct: 136 CRYIQDGGACYLSPTVRTIVDQAGTVLRDNAPPLTQKEIDVVRLFVSGHSLADIAKQLGR 195 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+ T+S+QK +AM KL + ++ L+ Y Sbjct: 196 SVSTVSTQKYTAMRKLRADTNVHLIRY 222 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 7/207 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGE---FEDSTALINNLPKLDA-HVLITDL 57 + +I+ DDHP V G+R LE + + VVGE +++ L +L A H+++TD+ Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDI 62 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 SM G GI L + FP + ++VL+M+NN + ++ +G VLK +L Sbjct: 63 SMRG---MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELV 119 Query: 118 KALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ A+ G+ F + + E A G+ L+PKES L A G+ +IA++L+ Sbjct: 120 NAIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSM 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S++T+ + + + KL + L+ Y Sbjct: 180 SVRTVETHRLNLRRKLRITGQAELVKY 206 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 5/203 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH +V G++ ++ ++ V VV E + ++ + +AHVL+ D+SMPG Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGL- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ L++ +K +P L I+VL+M + + VL G V K L A+ + Sbjct: 61 --SGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKV 118 Query: 124 QKGKKFT-PESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G ++ P+ ++L + ++L+ +ES++LR+ G VT+IA +L+ S KT Sbjct: 119 ASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNY 204 +S+ K AM KL +N++ LL Y Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKY 201 >UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE77A Length = 194 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 99/179 (55%), Gaps = 5/179 (2%) Query: 31 VVGEFEDSTALINNLPKLDAHVLITDLSMPG--DKYGDGITLIKYIKRHFPSLSIIVLTM 88 +VG L++ L + + V+I+D +M +KY DGI ++ I+R P + ++V T Sbjct: 1 MVGTARSPGDLVDMLTRRECDVVISDYTMSSGCEKYSDGIAMLSLIRRRHPGVGLVVFTA 60 Query: 89 NNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGD 148 +NP ++ ++L I I K+ ++P A+ A + + + ++ ++ + Sbjct: 61 IDNPGVIRSLLSKHISCIFSKRDHADEMPAAVRAAKSEEAYLSPVIASIVRESKTDAPTS 120 Query: 149 KR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 R L+P+E EV+RLF G + EIA +L RS +TISSQK +AM K+ ++ +I L+ Y Sbjct: 121 NRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLIKY 179 >UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA Length = 265 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 20/220 (9%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL----PKLDAH---VLI 54 ++VI+ DDH +VL GI L++ + V+G F S L + L P L AH VL+ Sbjct: 30 EQLSVIMLDDHEVVLSGITYQLKRERDIAVLGTFSRSRQLFDYLAQHGPAL-AHTRPVLL 88 Query: 55 TDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPT 114 D ++ G + DGI LI+ + FP I+V++ + P+I+ L G + K Sbjct: 89 IDYAL-GPQDTDGIALIRRLCVQFPVCPILVVSGHLQPSIVRLALMAGARGYIGKDCTLE 147 Query: 115 DLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR-----------LSPKESEVLRLFA 163 +L A+ + G+K+ S++ + + +R LSP+E EVLRL Sbjct: 148 ELVDAIRRVASGEKYVHPSLAERDDLVPPAAIEMRRGDTGRATLASLLSPRELEVLRLTL 207 Query: 164 EGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 +GF V +IA+KL+RS KTIS+QK+SA KLG+ D L Sbjct: 208 QGFEVGQIAEKLSRSNKTISTQKRSAYRKLGISGDRELFK 247 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ ++VVGE E P++ VL+ D+SMPG Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPG-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + +I+ +M+ N L G V K G DL KA+ + Sbjct: 63 -MGGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREV 121 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + GK F ++ L+ ++ +RL+ +E EV RL AEG LV +IA +LN KT Sbjct: 122 KSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKT 181 Query: 182 ISSQKKSAMMKLGVENDIALLN 203 +++ + S KLG+ + + L+ Sbjct: 182 VANYQTSLKQKLGIHSPVDLVR 203 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 12/208 (5%) Query: 5 NVIIADDHPIVLFGIRKSLE-QIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++ADDH IV G+R LE + +W + E D A + L ++I DLSMP Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDW-EICAEASDGRAAVQFAEDLAPDIVILDLSMP--- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I H P +++LTM+ + L + G +LK A DL A+ AL Sbjct: 64 ELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDAL 123 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGFLVTEIAKKLN 176 +G+ F ++ + G G +R L+P+E E+L+L AEG ++ K LN Sbjct: 124 IRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALN 183 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT + + M KLG+++ L+ Y Sbjct: 184 ISVKTAETHRARIMAKLGIDSVADLVRY 211 >UniRef50_B2JLH9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JLH9_BURP8 Length = 219 Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 5/206 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM-PGD 62 ++IADDHP++ + +L + V + L+ L + ++ITD +M G Sbjct: 7 FRIVIADDHPVIRHAVIHALNGLPGFTVDAAVKSGAELLGVLSQGKWDLIITDFTMDTGK 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLK-QGAPTDLPKALA 121 DG++LI + R P + ++V TM NN +L+ + + G+V K +G AL Sbjct: 67 SETDGLSLIGQLCRQHPDVPVVVFTMLNNDDMLARLSRSGVAGVVDKCEGVEEFRSAALE 126 Query: 122 ALQKGKKFTPESVSRLLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + + + + L+ ++ G G+ L+ KE EV+RLFA G +T+IA+ LNRS Sbjct: 127 VMHHRRPYFSAKIRMRLQHLNFGNGRRGGEPALTKKELEVIRLFASGASLTDIARHLNRS 186 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 + TI++QK +AM KL ++ + L+ Y Sbjct: 187 LSTIATQKSAAMKKLYLQTNADLVKY 212 >UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM Length = 226 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 111/220 (50%), Gaps = 27/220 (12%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAH--VLITDLSM 59 + V + DDHPIV FG+ L+ + +VG + ++ LI H VLITD + Sbjct: 6 TKITVALLDDHPIVTFGLALRLQDEADITIVGCYASASDLIAAFSVRTMHIDVLITDYQL 65 Query: 60 -PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 PGD DGI LI+ +K P++ I+V ++ + + + ++ + G V K+ L K Sbjct: 66 RPGDI--DGINLIRLLKIKMPAVKIVVSSVFHTLSTVMLAMNAGVRGFVGKEEPLEHLVK 123 Query: 119 ALAALQKGKKFTPESVSRLLEKISAGGY----------GDKR-------LSPKESEVLRL 161 + + +G V+ LL+ AG Y G R L+ +E EVLR Sbjct: 124 VVREVARG----AHRVNSLLDA-EAGAYHAASVATAKNGTSRACQAPVTLTLREREVLRC 178 Query: 162 FAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIAL 201 FA G V++IA K RS+KTIS+QK+SA KLG+ D L Sbjct: 179 FATGMSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFEL 218 >UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL Length = 215 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M++ + IADDHP VL + L+ + VV + + L++ L K++ +++TD SM Sbjct: 1 MHHTTISIADDHPFVLASMTAVLQGVPQFAVVHQCANGKDLLDALSKVETDLVVTDFSMT 60 Query: 61 G-DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 D+ DG L+ ++R P + I++LT N I + L + + +V K + ++L +A Sbjct: 61 REDRSVDGFGLLAELRRRHPDVKIVLLTALVNAGIFTRALSVGVGALVSKTDSISELARA 120 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAK 173 A ++ + +P +S ++ I G D RL+PKE EV+RL G + +IA Sbjct: 121 CARVKISR--SPY-LSPAVQSIIHGASMDHPNTSKARLTPKELEVVRLLVAGRSLAQIAS 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 +L RS TIS+QK +A K+G + L+ Y Sbjct: 178 QLGRSPSTISTQKYNASRKIGATSYTQLIRY 208 >UniRef50_Q470N3 Two component transcriptional regulator, LuxR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q470N3_RALEJ Length = 206 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 5/204 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M ++V+I DDH +V G R+ LE E + VV EF D+ + L + A VLI DLSMP Sbjct: 1 MKTIDVVITDDHAVVRTGYRRLLELDEGMRVVAEFGDADTAYDWLVRNRADVLILDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G+ +++ ++ P+L +V +M+++ AI+ + G + K AP L A+ Sbjct: 61 GRG---GLEMLQRLRIRVPALHTLVFSMHDSAAIVMQAMRAGAVGYLTKNSAPEALVDAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G + + ++ LL+ + G LSP+E ++ R FA G + ++A + S K Sbjct: 118 RRVAGGLRVLSDDIAGLLD--TGGQPPHLALSPREFDLFRQFARGTALEDVAARFCLSTK 175 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+++ + K+G+ N I + Y Sbjct: 176 TVANYQTLIRKKMGLANRIEMHRY 199 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 112/208 (53%), Gaps = 10/208 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDHP+V G+ L +E + +VGE D ++ + +L +++ DL MP Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP--- 75 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ K I+R FP + +++L+++ N + ++ +G VLK T+L +A+ ++ Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 124 QKGKKFTPESVSRLL--EKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G F +S+++ + ++ G+ K+L+ +E+EVL + AEG E+A ++ Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 ++T+ + ++ M KL + N L Y Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKY 223 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 5/212 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++V++ DDHPIV G R+ LE ++VV E +++ D V++ D+SMPG Sbjct: 7 TGISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPG 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I+ P I+V TM+N ++ A G V K P+ + A+ Sbjct: 67 ---ASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIR 123 Query: 122 ALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 ++ +G++ + ++ +L + +S G +L +E E+LR FA G +IA LN S+ Sbjct: 124 SVARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSV 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + K G D L+ +S L+ Sbjct: 184 KTVQNYHYLIKTKTGARTDAQLVRLAASCGLT 215 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 106/204 (51%), Gaps = 9/204 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLP---KLDAHVLITDLSMP 60 + +++ DDHP+V G+R LE E + V GE + ++ +LP L +++TD+ MP Sbjct: 5 IRILLVDDHPLVRDGVRMRLEATEHICVAGE---AASVGESLPLAHALAPDIVLTDIRMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI L + FP + ++VL+M+++ + + L G VLK L +A+ Sbjct: 62 A---ASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAI 118 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ +G + + +LL+ + ++ L+P+E+ VL+ +EG EIA + S++ Sbjct: 119 EAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVR 178 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + KL +E AL+ Y Sbjct: 179 TVETHRLHLRRKLRIEGQAALMKY 202 >UniRef50_C5ALF7 Response regulator n=6 Tax=Proteobacteria RepID=C5ALF7_BURGB Length = 215 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V +ADDHP+VL G++ L +++ + + L+ L + VL+ D Sbjct: 1 MNKITVGVADDHPVVLQGVQHMLLSSPDIDLHFQIDAIKPLLVQLVESPVDVLLCDYEFE 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAP-TDLPKA 119 GD DG+ L+ I+R P ++ L+ + +SA L G + K+ +L A Sbjct: 61 GDPEADGLHLLGRIRRIAPHTRVLFLSCHCAAYTVSAALSAGASGFIGKRREDFANLITA 120 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKK 174 + A++ + +S++ L + D +LS KE+ V+RL G + +IAK+ Sbjct: 121 IHAVKSRGFYLADSIASRLLATTGHATNDICLSLNKLSAKEAAVVRLICNGLSINDIAKR 180 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIAL 201 L RS KTIS+QK + M KLGV+NDI L Sbjct: 181 LKRSPKTISNQKNAGMKKLGVKNDIEL 207 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 NM V IADDHP+V G+++ L +V GE +I+ + V + D MPG Sbjct: 2 NMRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGK 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI LIK +++ FP ++VL++ VL G + K+ AP DL A+ Sbjct: 62 ---GGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRK 118 Query: 123 LQKGKKFTPESVSRLLE-KISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +G +F ++ L +S G GD+ RLS +E +++ L A G V EIA++L Sbjct: 119 VARGGRFVSAALGEQLALSLSTG--GDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFL 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S TIS+ +K + KL ++++ L+ Y Sbjct: 177 SPNTISTYRKRILEKLDLKSNAELMRY 203 >UniRef50_Q7NVE2 Capsula synthesis response regulator transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVE2_CHRVO Length = 231 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA---HVLITDLSMP 60 + VI+ DDH +VL G+ LE + +++ G F S L+ L A V + D ++ Sbjct: 12 IRVILLDDHLMVLHGLGSHLENVPDISLTGSFSSSGQLMRTLAGAAAPLADVAVIDYALR 71 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 D DG+ LI+ ++ FP L I+V++ PA ++ + G + K+ ++L A+ Sbjct: 72 PDDV-DGLNLIRAMRIRFPWLRILVMSAYYTPATVALAMRGGAHGFIGKEQGMSELILAI 130 Query: 121 AALQKGKKFTPESVSRLLEKISAGG----------YGDKRLSPKESEVLRLFAEGFLVTE 170 L G+ + E + + + S LSP+E EVLR G V+E Sbjct: 131 RRLAAGQTYLSEDMREAMPQQSGEASIPSDALPNLLDHPDLSPREREVLRCCLLGLSVSE 190 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVEND 198 IA K +RSIKTIS+QK+SA+ KLG+ +D Sbjct: 191 IAVKFSRSIKTISNQKQSALKKLGLRSD 218 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +++ DDHP+ G++ L +V+ E +D + I + + ++I D+SMPG Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPG--- 60 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DGI + + IKR P + I++LTM + A L LD G VLK+ T+L A+ + Sbjct: 61 LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVM 120 Query: 125 KGKKFT-PESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ + P + +L + +S LS +E EVL+ A G+ EI+ +L Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 SIKT+ + KK M K+G + AL+ Y Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRY 208 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 14/213 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAH---VLITDLSMP 60 M+V I DDHPIVL G++ LE E + V G F+ + + L LD+H V++ D+++P Sbjct: 1 MDVFIIDDHPIVLQGLKNLLESREGIRVTGIFDQADS---ALAALDSHIPEVMLMDINLP 57 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+TL + +K+ P + ++ L+++N +++ ++L G VLK D+ AL Sbjct: 58 DIS---GVTLCQQVKQAHPEIRVVALSIHNERSVIMSMLQSGASGYVLKNAIGDDIVAAL 114 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A +G+ + + L + A G K RL+ +E E+L L +G+ +IA +L Sbjct: 115 QAAMEGQIYLCAETQKALNE--APGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFI 172 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S T+ S +K+ K GV N ++ + + L Sbjct: 173 STHTVESHRKNLKEKFGVPNTATVVRMAAELGL 205 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++++ DDH +V G+R LE+ VVGE E+ + K +++ D+ +PG Sbjct: 4 DIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPG--- 60 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +GI + RH PS+ +I+L+M ++ + + + VLK+ + +L AL + Sbjct: 61 MNGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVA 120 Query: 125 KGKKFTPESVS-RLLEKISAGGYGD------KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G + VS RLL++I G + LSP+E +VLRL AEG +IA L+ Sbjct: 121 RGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDL 180 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLS 206 ++T+ S +K+ M KLGV N++A L L+ Sbjct: 181 GLQTVRSYRKTMMKKLGV-NNVAGLTQLA 208 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 11/212 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++A+DH IV G+ L + VVGE E+ I + +L V++ D+SMP Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + +K+ +P + I++L+M++ + L G ++K+ APTDL KA+ Sbjct: 61 EL---NGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAI 117 Query: 121 AALQKGKKFTPESVSRLLEK--------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A G F S+S+ + K +S G LS +E EVL+L AEG EIA Sbjct: 118 HAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L S KT+ + + KLG+ L Y Sbjct: 178 GHLYISPKTVEAHRNHIQKKLGLNGTAELTKY 209 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 103/203 (50%), Gaps = 5/203 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ + VV E E + V + DLSMPG Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGM- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + + +++ +M+ N A L G V K G+ +L KA+ + Sbjct: 65 --GGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEV 122 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +GK + S+++ + + G GD +LSP+E EV RLFAEG EIA+ L S KT Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNY 204 +++ KLG+ N + ++ + Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRF 205 >UniRef50_B1T3D5 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3D5_9BURK Length = 218 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 6/207 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN++ V +ADDHP+VL GI ++ + + + A+I + VL+ D Sbjct: 1 MNSIRVGVADDHPVVLAGIENLIKNAPGLEIAFLADTMAAMIEAIESQPIDVLVCDYEFS 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLK-QGAPTDLPKA 119 + DG+ L+ I+R FP+L +++ + P I+SA L G + K Q P+ L +A Sbjct: 61 DEPLTDGLNLLASIRRRFPALKVLLTSTRTAPGIVSAALIYGATGFIGKVQANPSTLTRA 120 Query: 120 LAALQKGKKF-TPE----SVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + A+ G + +PE +S L I A LS E +V+ L + EIA++ Sbjct: 121 ILAVHAGSIYLSPEFDGNVLSCFLRVIRAFNAVPVALSDLELQVVGLICRDVAMPEIARR 180 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIAL 201 LNRS TI+ +K++AM KL +D L Sbjct: 181 LNRSPGTIAGRKRAAMKKLAAGSDAEL 207 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 6/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L+ V GE DS I + A VL+ DLSMPG Sbjct: 69 IKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR- 127 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LIK IK P+L I+VLTM+ G + K+ A ++L A+ + Sbjct: 128 --NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKV 185 Query: 124 QKGKKFTPESVS-RLLEKIS--AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G + +++ R + ++ A RLS +E +V R A G +T+IA +L S K Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+S+ K + K+ + ++ AL+ Y Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRY 269 >UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella RepID=A9IRH9_BORPD Length = 258 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 20/214 (9%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + + I DDHP++ G+ L ++V S AL+ +L V + D +P Sbjct: 45 DRLRIAILDDHPVITLGVAAYLRSQPDFDIVHAETTSEALVRSLKHQPCDVAVVDFYLPR 104 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL- 120 + DG+ I+ ++R P ++II SA + E + GA LPK+ Sbjct: 105 QPW-DGMDFIRRLRRQHPHMAIITF---------SAGAPAETEYAAFRAGAHGYLPKSAS 154 Query: 121 ---------AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 AA +G+ S +A + D RL+ E EVLR A+G VT++ Sbjct: 155 MPVLVEVIRAAHSRGRPGDFISYKNGTLHTAAPRHPDTRLTTAEIEVLRQIAQGLSVTQL 214 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYL 205 A +L RS KTIS+ K+ AM KLG+ +D+AL YL Sbjct: 215 AARLLRSKKTISTHKRRAMKKLGLADDLALALYL 248 >UniRef50_Q1VWI3 Transcriptional regulator n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VWI3_9FLAO Length = 209 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 4/202 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V IADDH ++ GI + E +++V D + L ++ITDL MP Sbjct: 2 IRVAIADDHQTLIDGISLRFDGNESIDLVFSANDGKDFLKQLKITPVDLVITDLKMPK-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+TL + IKR F ++ +IVL+M + P +++ ++D+D++G +LK + +L A+ + Sbjct: 60 -MDGVTLAREIKRDFKNVKVIVLSMFDQPDVINKMVDVDVDGYILKTSSLDELVTAIGEV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK-RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 KGKK+ + + + K LS E ++L L AEG EIA + ++ TI Sbjct: 119 NKGKKYFDKHLHGITSLFDVNSTSSKTSLSNAEKDILNLIAEGKTSQEIANERACAVSTI 178 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 + +++ KL + LL Y Sbjct: 179 HTHRRNMAHKLELYGKGELLRY 200 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 5/203 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH +V G+R L+ + VV E D + + HVL+ DL+MPG+ Sbjct: 13 QIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGE 72 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + + I + P +++VLTM +PA L G VLK+ A +L +A+ Sbjct: 73 Q---SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRL 129 Query: 123 LQKGKKF-TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 ++G+ + PE +R+ + G D L+ +E EVLRL A G EIA++L SI+T Sbjct: 130 AREGRTYLNPELGARMAAEPPPSGPPDD-LTARELEVLRLIALGHTNAEIAQQLFLSIRT 188 Query: 182 ISSQKKSAMMKLGVENDIALLNY 204 + S + K+ + L+ Y Sbjct: 189 VESHRAHIQQKVRRSSRAELVRY 211 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 7/204 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +++ DDH ++ G+R LE + VVGE EDS I L +++ DLS+ Sbjct: 3 GILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSS- 61 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ I+ ++ P I+VLTM+++ + L G VLK+ A +L A+ A+ Sbjct: 62 --GLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVL 119 Query: 125 KGKKFT-PESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G+ + P RLLE I + LS +E EVL L A G+ EIA +LN S K Sbjct: 120 RGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + M KLG+ + AL+ + Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQF 203 >UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969032 Length = 215 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 5/196 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + ++++ DDHPIVL GIR LE + + + + + L D + + D+ +P Sbjct: 9 SKYHLLLIDDHPIVLAGIRNILEVCPEIGEIYAADSAAKALELLKSHDISICMVDIELPD 68 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G LI+ I+ +P + II+ TM++ I+ ++ D++ ++LKQ P +L +A+ Sbjct: 69 ---MSGFELIEQIRLLYPDMRIIIETMHSEVWIVRRMVKADVDAVILKQSDPENLQEAIY 125 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 ++ G+K+ + L K+ + LS +E EVL+ +EG EIA KL S+ T Sbjct: 126 SVLSGRKYFCPHFRKCLRKLPPE--MPQVLSKREQEVLKCISEGLKSNEIATKLYISVNT 183 Query: 182 ISSQKKSAMMKLGVEN 197 + +K M+KL +N Sbjct: 184 VEFHRKQIMLKLEAKN 199 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 9/217 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH +V GIR LE++ V +VGE D + + + I D++MPG Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G I R P +++L+M+ + L G +LK A +L AL A+ Sbjct: 64 --NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAV 121 Query: 124 QKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +KG+ + S+S+ + ++ K L+P+ E+++L AEG EIA LN Sbjct: 122 RKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNL 181 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S+KTI + + M +LG+ + ++ Y L AD Sbjct: 182 SVKTIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_C6VZM4 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VZM4_DYAFD Length = 214 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 112/210 (53%), Gaps = 9/210 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + I+ADDH I L G+ K+L +IE +++V + +I L + +LI D++MP Sbjct: 1 MNRVRTILADDHEIFLDGLEKTLCEIEEIDIVAKVSRGNDVIYKLETISPDLLILDVNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ ++ YI++ I+VL+ + A++ VL++ I G V K +L A+ Sbjct: 61 Q---KDGVEILSYIQKSSLKAKILVLSYYLDYALIKKVLNMGIMGYVPKDAGKEELHAAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISA--GGYGD----KRLSPKESEVLRLFAEGFLVTEIAKK 174 ++ GK + P+SV +++ + + D L+ +E ++L A F EIA K Sbjct: 118 RSIMDGKPYLPDSVKEIIKTRESRPDPHDDFVSMYNLTKREVDILTEVAREFSTAEIADK 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L S T+ + +KS + KL +N +L+N+ Sbjct: 178 LCLSEYTVETYRKSIIRKLAAKNIASLVNF 207 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 115/207 (55%), Gaps = 12/207 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VIIADDH I+ G+++ L + E + V+ E +++ I + +A VL+ D+S+P D+ Sbjct: 8 IKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLP-DR 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ +KYIKR +++++L+M+ L G + KQ A ++L A+ + Sbjct: 67 --SGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQTV 124 Query: 124 QKGKKF-TPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKLNR 177 +GKK+ TPE L +I G D++ LS +E + + A G VT++A KL+ Sbjct: 125 ARGKKYITPEVAEILANQI---GRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSL 181 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+S + + K+ ++++ L +Y Sbjct: 182 SVKTVSMYRARLLEKMQLKHNAELTHY 208 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 13/210 (6%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKL-----DAHVLITDLSM 59 +++ADDH +V G+R L+ + VVGE D I + + + + + D++M Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAM 88 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P G+ + + R +P L I++LTM++N L L G VLK A DL +A Sbjct: 89 P---RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQA 145 Query: 120 LAALQKGKKF-TPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A +G+ F P ++S L LE+ G + L+P+E E+L+L AEG EIA Sbjct: 146 CRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADT 205 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L S+KT+ + + + KLG+++ + L Y Sbjct: 206 LFISVKTVERHRANILAKLGMKDRLELTRY 235 >UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH0_PSEF5 Length = 251 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 10/222 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + + DDH ++ ++ L+ + +VG + S LI+ L + +L+ D + + Sbjct: 9 LRIAVLDDHALIRMAMQLQLQSVADFQLVGLYASSGELISALRDTELDLLVLDYQL-QEC 67 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ LI+ ++ +P L I+V + P + ++D+ G + K + DL A+ + Sbjct: 68 DLDGLRLIRLLRNKYPHLLILVSSATETPFFVKQIIDIGANGFLGKSQSLDDLIPAIRTV 127 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD---------KRLSPKESEVLRLFAEGFLVTEIAKK 174 + + ++ ++ G + + LSPKE+EVLR F +G +++IA K Sbjct: 128 ASKRLYLSPLLAFAVQHPPIGPAAEPGSPPLTSLETLSPKENEVLRCFLDGLRISQIASK 187 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 +RSIKTIS QK++A KLG+ D L + L A ++ Sbjct: 188 FSRSIKTISGQKQAAFRKLGIRTDAELFKVQRKLDLHIASRE 229 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 6/200 (3%) Query: 8 IADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDG 67 +ADDHP+V +R+ L + VV E D + D + + D SMPG G Sbjct: 1 MADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPG---CSG 57 Query: 68 ITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGK 127 ++LI++++R FP ++VL++++ + VL G + K+ A L +A+ A+ G Sbjct: 58 LSLIEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGG 117 Query: 128 KFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 V++ L I +GG +RLS +E V+ L + G + EIA++L+ +T++S Sbjct: 118 THVSAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVAS 177 Query: 185 QKKSAMMKLGVENDIALLNY 204 + + KLG+ + L++Y Sbjct: 178 YRHRVLRKLGLHDTAELVSY 197 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 6/205 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +I+ DDH +V G+ + E + VVGE + L+ L +++ DL MPG+ Sbjct: 2 HVRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGE 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA- 121 +G LI+ I+RH+P L I++L+ ++ ++S + G + K +P L +A+ Sbjct: 62 ---NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHK 118 Query: 122 ALQKGKKFTPESVSRL--LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + GK +P L I LS +E E+ RL EG +I+++L S Sbjct: 119 VVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISD 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 +T+S+ K + + KLG++N + L++Y Sbjct: 179 RTVSAHKINLLNKLGLKNVVELVHY 203 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 3/202 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ V++ DDHP VL G+R LE + V+G+ I + ++++D+ MP Sbjct: 4 NLRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPD- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ L FPS+ +I L+M+ +P + L + VLK+ +L A+ Sbjct: 63 --ANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRT 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G + + L + L+PKE+ VL+L AEG EIA++L S++T+ Sbjct: 121 VAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTV 180 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 + + KL V L+ Y Sbjct: 181 ETHRLHLRRKLRVGGRAELVKY 202 >UniRef50_A3K169 Response regulator n=1 Tax=Sagittula stellata E-37 RepID=A3K169_9RHOB Length = 218 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 5/199 (2%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 ++IADDH +V G++ L QI+ V+VVGE ++ + + + +L+ D +MP Sbjct: 12 IVIADDHAVVRDGLKAVLAQIDHVSVVGEADNGIEALAMVKTMRPDLLLLDSAMP---LA 68 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 G+ + +R P V+T +P +L+ + + I+G+ LK P ++ + L + Sbjct: 69 RGMEVFGEARRWSPETRCAVITGMTSPQVLADWIAVGIDGLFLKSSPPEEMLRGLTMILA 128 Query: 126 GKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQ 185 G + +V +LE +A G + L+ +E +VL L AEG IA++L+ S+KT+ + Sbjct: 129 GDTYVARAVLDILE--AADNDGREALTMRERQVLYLIAEGCSNAAIAERLSISVKTVDNH 186 Query: 186 KKSAMMKLGVENDIALLNY 204 + M KL V + L+ Y Sbjct: 187 RTRLMAKLQVHSVAQLVAY 205 >UniRef50_C5A924 Two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A924_BURGB Length = 218 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 7/212 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V +ADDHP+V + K L + + VV L+ L ++ITDLSM Sbjct: 9 RRIRVALADDHPLVASAMTKLLGETPSITVVHVSHSGAELLQQLRADPCEMIITDLSMGT 68 Query: 62 DKYGD--GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 + D G+ L+ +++++PS +IV T N+PA+ +L L +V K+ + L + Sbjct: 69 SDHADQDGLKLVSALRKNWPSARVIVYTALNHPALAQRLLYLGAHAVVCKEDS---LEEL 125 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 LAA+ + +S+ L + L+P+E EVLR G V +I++++ ++ Sbjct: 126 LAAVDQVAVQGSTYLSKQLRGTAPAPASA--LTPRELEVLRHIGCGLSVVDISRRMFVTV 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+S+ K++AM KL + + + L+ Y+ + L+ Sbjct: 184 STVSTHKRNAMDKLNIRSTVELIQYIHAAGLA 215 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 3/201 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V I DDHP+V G++ L + + +VG +D + +N +L V++ D+SMP Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMPT-- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + I P +++L+M++NP + + + G +LK ++ A+ A+ Sbjct: 67 -MNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKAV 125 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK S+++LL ++L+ +E VL A+G EIAK LN S +T+ Sbjct: 126 ANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVE 185 Query: 184 SQKKSAMMKLGVENDIALLNY 204 + +++ KLG+ + L++Y Sbjct: 186 AHRRNMKTKLGIHSLAKLISY 206 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 5/203 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ +++ DDH +V G+R+ LEQ + V V+ E + + V++ D+SMPG Sbjct: 4 NIRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGM 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ ++ I +P +I+ +M+ N A S L V K GA DL +A+ Sbjct: 64 ---GGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVRE 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + +GK + +++ + + G D + LS +E EV RL A G V EI+ L S K Sbjct: 121 VAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQK 180 Query: 181 TISSQKKSAMMKLGVENDIALLN 203 T+++ + KLG+ + I L+ Sbjct: 181 TVANYQTLLKQKLGITSPIELVR 203 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 19/210 (9%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDH +V G+R +E V GE + + +L V++ D++MP + Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMP---ELN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I+ P II+LT++++ +L LD G VLK+ A L A+ AL K Sbjct: 58 GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKH 117 Query: 127 KKFTPESVSRLLEK------------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + P SR E+ +S GG L+ +E EVLRL A+G E+A + Sbjct: 118 APYVP---SRAAERPGNAAAQERNTVVSRGGRVTS-LTQREREVLRLLAQGDSNREVAGQ 173 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L+ S KT+ + + + M KLG + + L++Y Sbjct: 174 LSISAKTVETHRANVMRKLGASSIVDLVHY 203 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NV++ADDH IV G+R LE +NVV E E+ I +L ++I D+SMP Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPD-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + I P + +I L+M+ + + +L+ G +LK A +L A+ + Sbjct: 61 -MNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTV 119 Query: 124 QKGKKFTPESVSRLLEK---ISAGGYG---DKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +++ ++ K A G L+P+E E+L+L AEG +IA L+ Sbjct: 120 LSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHV 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+ + +++ KLGV + L+ Y Sbjct: 180 SVKTVETHRRNITQKLGVGSVAELIKY 206 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 10/215 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V++ADDH +V GI K LE E + VVGE D + + +++ DL+MP Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + G GIT IK IK P + +++LT+++ + V+ EG + K P +L +A+ Sbjct: 61 --RMG-GITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + KG K P S + ++ Y LS +E EVL L A+G +IA++L S K Sbjct: 118 DKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 181 TISSQKKSAMMKLGVEND------IALLNYLSSVT 209 T+ + + + KL V ND +AL L S+T Sbjct: 178 TVKNHVSNILRKLSV-NDRTQAVIVALKRGLVSLT 211 >UniRef50_A1S7C5 Response regulator receiver protein n=5 Tax=Proteobacteria RepID=A1S7C5_SHEAM Length = 238 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 20/208 (9%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQ----IEWVNVVGEFEDSTALINNLPKLDAHVLITD 56 + N+NVIIADDHP+ +R++L W + D+ + + P++D +++ D Sbjct: 18 LENLNVIIADDHPLFRNALRQALSSAFADTRWFE--ADSADALQQLLDKPEVDYDLVLLD 75 Query: 57 LSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 L MPG G + + +++ H+P + ++V++ + + +S + G + K + L Sbjct: 76 LQMPGSH---GYSTLIHLRSHYPDIPVVVISAHEDAQTISRAIHYGSAGFIPKSASMETL 132 Query: 117 PKALAALQKGKKFTPESVSRLLEKIS-------AGGYGDKRLSPKESEVLRLFAEGFLVT 169 +A++A+ G + P+ + L KI AG D L+P++ VL++FAEG L Sbjct: 133 TEAMSAVLYGDIWLPQDIE--LVKIEEDGTDQVAGKLAD--LTPQQYRVLQMFAEGLLNK 188 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVEN 197 +IA L S TI + + KLGV N Sbjct: 189 QIAYDLGVSEATIKAHATAIFRKLGVRN 216 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 18/214 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLE-QIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + + DDH I+ G++ L Q E + GE D+ ++ + KL+ ++ITD+SMPG Sbjct: 5 NTKIFLVDDHAILREGLKMILSGQFE---ICGESGDAEKALDQIGKLNPDLVITDISMPG 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI L+K +++ +P++ I+L+ ++N + +L+L I G VLK A DL +A+ Sbjct: 62 LS---GIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIE 118 Query: 122 ALQKGKKF-TPESVSRLLEK-ISAGGYGDKR---------LSPKESEVLRLFAEGFLVTE 170 A+ KG+ + +P + L + +G G++ LS +E E+L+L AEG Sbjct: 119 AVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNES 178 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 I K L S T+ + + M KL + L+ Y Sbjct: 179 IGKILGISPATVKVHRANIMKKLNLHKVADLVMY 212 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+++ DDH ++ G+ L +N++G ED A+ KL ++ DL +PG Sbjct: 9 INILVVDDHSLIFDGLLGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPG-- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G +I+ +++ +P + II+LT LD+ G VLK + L A+ + Sbjct: 67 -MGGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCV 125 Query: 124 QKGKKFTPESV-SRLLEKISAGGYGD-KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 KGK F S+ R + +S GD L+P+E +VL+L EG +IA+ L +KT Sbjct: 126 CKGKNFIDPSLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVIGLKT 185 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + + + + M KL N L++++ + L Sbjct: 186 VETHRMNLMRKLNAHNVAELMHWVQRLGL 214 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 5/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +I DDH +V G R LEQ+ VV E + + ++ V+I D+ + G Sbjct: 5 TIRTLIVDDHAVVRSGYRSYLEQVPGFQVVAEADCANEAYAQYKRMHPDVVIMDIMLQG- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI + I + P I++ +M +P +L L++ + G V KQ P L +A A Sbjct: 64 --ASGIDASRRILSNHPGAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIA 121 Query: 123 LQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G ++ S+++ + + G LSP+E E+ L G V EIA+ LN S K Sbjct: 122 VAGGDRYLDASMAQSLVFSRYDRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAK 181 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T++++ KLGV +DI L+ + + P Sbjct: 182 TVANRASMIRQKLGVSSDIQLVKLAVAADIVP 213 >UniRef50_D2QUB6 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUB6_9SPHI Length = 213 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 15/211 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLP-KLDAHVLITDLSMPGD 62 M +++A+DH I+L I L I+ V VV + + ++ L + D +++++D+ MP Sbjct: 1 MRILVAEDHRILLDSIAMLLASIDGVEVVSKHTNGQQVLTALEIEPDINLVVSDVQMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L +++ FP + I +LT+ + P + + +G VLK ++L AL Sbjct: 59 -VMGGIELTIQLRQRFPQVKICLLTVADQPEAIKEAIRAGADGYVLKSAERSELETALRT 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYG-----DK----RLSPKESEVLRLFAEGFLVTEIAK 173 + KG KF E V +L+ + G DK +S +E +VL+L A+ F T+IA+ Sbjct: 118 ISKGNKFYSEQV--MLQLANEVGIEVIPDLDKPQKITISKRELDVLKLIAQEFSGTQIAE 175 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 KL S T+ + +K M KLGV+ I L+ Y Sbjct: 176 KLFISPTTVETHRKHLMQKLGVQTTIGLVKY 206 >UniRef50_Q31FU6 Two component transcriptional regulator, LuxR family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FU6_THICR Length = 232 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 17/220 (7%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++A+DH +V G + L+ V V+ E +D ++ + + +LI DLSMP Sbjct: 7 KVLLAEDHDLVRAGFKSILDSDGTVKVIAEAQDGETTLSLIEEKQPDILIIDLSMP---K 63 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ +I +K+ + IIVLT P + VLDL +EG+ LK + +L + ++ Sbjct: 64 LSGLAVITQLKKQKNPIKIIVLTAAEAPNVWKEVLDLGVEGLALKSVSKAELVSGIKSVI 123 Query: 125 KGKKFTPESVSRLL---------EKISAGGYGDK-----RLSPKESEVLRLFAEGFLVTE 170 + F + L +K GDK +LS +E +V++L AEG+ + Sbjct: 124 ADENFIHSEIQPALDAYLAELEGQKTPEEDSGDKPSRPKKLSVREKQVIKLVAEGYKTKD 183 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 IA L S +T+S +++ M KLG+ L+NY S + L Sbjct: 184 IADMLEISDRTVSKHRENIMTKLGMTASAELVNYASHIGL 223 >UniRef50_D2QUK2 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUK2_9SPHI Length = 215 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 9/206 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH + + GI + + V ++I L + V++ D+S P + Sbjct: 2 IRVLIADDHNVFVEGIASLISGSSDIQVTERCYTVPSVIERLSEEAVDVVLLDISFP--Q 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L ++I R +P ++ LTM+++ +++ V+ +G +LK T+L +A+ + Sbjct: 60 IEDGLNLCEHITRSYPKTKVVALTMHDDASLIKRVVKKGAKGYLLKNTTKTELLQAIQTV 119 Query: 124 QKGKKFTPESVSRLL------EKISAGGYGDK-RLSPKESEVLRLFAEGFLVTEIAKKLN 176 K++ E++ +L K A G G K L+P+E+EVL L ++G ++A +L Sbjct: 120 YHEKQYFNETIMHILLNDSPKTKKPAAGVGIKPNLTPRETEVLTLMSQGLTTQQMATQLF 179 Query: 177 RSIKTISSQKKSAMMKLGVENDIALL 202 S K + + S +MK GV N L+ Sbjct: 180 VSAKAVEFHRSSLLMKFGVPNTALLI 205 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 107/202 (52%), Gaps = 4/202 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+IIADDH IV+ G++ L + VVGE D + + ++ + D+SMP Sbjct: 7 LNIIIADDHQIVIDGLKSLLVAHPHIKVVGEASDGEEALKLIENNTVNIAVLDISMPK-- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ K IK+ +P + I++LTM++ + + ++ +G +LK + +AL + Sbjct: 65 -MNGVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETI 123 Query: 124 QKGKKFTPESV-SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+++ V + LL+ + + + +E +VLRL +EI+ KLN + T+ Sbjct: 124 NNGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTV 183 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 + +++ + K GV++ + L+ Y Sbjct: 184 ETHRRNLIEKTGVKSSLGLVRY 205 >UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML78_BDEBA Length = 204 Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 9/212 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQI-EWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M+ V+I DDHPIV G++ +E++ + VVGE ED+ + + + V++ D + Sbjct: 1 MSLEKVLIIDDHPIVRAGLKTEVERLSDAFTVVGEAEDAAHALQMIQAENPSVVLLDHLL 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 G G ++ +I++ S+ ++V T + AIL + + IV K D+PKA Sbjct: 61 RG---SSGFEVLDFIRKFNASIRVMVFTQSLESAILKTYWNSPVVAIVSKGSLLEDVPKA 117 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 L AL++G++F ++ ++K G + L+ +E EV R+ A G EIA+ L S Sbjct: 118 LLALKRGERFLSANIREAIDK-----AGVEVLTKREIEVARMIATGRSNKEIAEVLGCSD 172 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +TI + K + M KLGV + + +++ LS Sbjct: 173 QTIKTHKTNIMTKLGVNTSVEVAMWVTKQGLS 204 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 9/205 (4%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 V+I DDHPIV G + +E + + V GE + I + + ++I D+S+ K G Sbjct: 11 VMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISL---KDG 67 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 G+ LIK +K F + ++ ++M++ L G V KQ AP L KA+ + K Sbjct: 68 SGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLK 127 Query: 126 GKKFTPESVSR--LLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 GK + +V+ + I + Y D+ LS +E EV EG IA+KLN S Sbjct: 128 GKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSS 187 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 KT+ + +++ KL +EN AL + Sbjct: 188 KTVETYRENIKHKLNLENATALTRH 212 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 10/203 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 NN +V+I +DH ++ G+R L +V GE D L +++ DLS+PG Sbjct: 3 NNCSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI I IKR P + II L+++ N + L ++G VLK + DL A+ Sbjct: 63 ---MNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMR 119 Query: 122 ALQKGKK-FTPESVSRLLE------KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + GKK +PE L+E ++S G L+ +E VL+L AEG ++ Sbjct: 120 VVLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIY 179 Query: 175 LNRSIKTISSQKKSAMMKLGVEN 197 +N S KTI + S M KLG+ N Sbjct: 180 MNLSPKTIEKYRASLMRKLGITN 202 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 9/210 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ GI + +E E V+VVGE D L+N L A ++I D+SMP Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI K I+ +P + I+ L+M+ L G +LK+ T++ A+ Sbjct: 61 K---MSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAM 117 Query: 121 AALQKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +GK F ++ + I + + LSP+E EVL L AEG +IA Sbjct: 118 DTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADI 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L S +T+ + S M +L + L+ Y Sbjct: 178 LCISTRTVEHHRASIMKRLDLRTLADLIKY 207 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 7/205 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +IADDH I+ G++ L + V E + + L K L+ DL+MPG Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI LIK IK FP L I++L+M+ L G + K A T L A+ + Sbjct: 61 --NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKV 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G F ++V+ +L +I G D L+ +E ++ + +G VTEI ++LN S+ Sbjct: 119 ADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 KT+S+ K S + K+ + N L+ Y Sbjct: 179 KTVSTHKASILAKMNLRNSAELVRY 203 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 113/210 (53%), Gaps = 11/210 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN +N++IADDH + L GI LEQ + ++ + + + + K +I D+SMP Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI L K +K+ P++ I++++ ++N I+S ++ + + G +LK A +L KA+ Sbjct: 61 E---MDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + E + + +S +K+ LS +E E+L L A + EIA+K Sbjct: 118 NTIASGENYFAEELEE--KHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEK 175 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 S+ T+++ +++ + KL +N L+ Y Sbjct: 176 TFISLNTVNTHRRNLLSKLNAKNTAGLVKY 205 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 7/207 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADD ++ GIR +E + + E D I+ + +L V++ D++MP Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + + I++ P+ I+VL+ + P I+ L + G +LK +L +AL Sbjct: 61 GP---SGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQAL 117 Query: 121 AALQKGKKF-TPE--SVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G++F +P+ +SR + G G + L+ +++E+LRL A G EIA+ L Sbjct: 118 EMVLHGERFLSPKIREMSRFSDAEGTSGSGTQ-LTARQTEILRLVASGRTTKEIARDLGI 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S KT+ + M ++GV + L + Sbjct: 177 SPKTVEFHRSRLMERIGVHDVTGLTRF 203 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 10/208 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++++ADDH IV G++ LE VVGE D +N + L VL+TDL M G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI + + + P ++++L+M N A + L VLK +L +++ Sbjct: 60 -MSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118 Query: 124 QKGKKF-----TPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G ++ + +++ +EK + D + L+ +E EVL L A+G EIA++L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S +T+ + + M KL + N LL Y Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRY 206 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M N +V I DDH +V G+ + Q + V G +D + L ++ ++I DLS+ Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADMEVCGSADDGPVALQKLFNIEPDIIIVDLSLT 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ +IK IK +P++ I+VL+M + G V+K P+ + +AL Sbjct: 61 T---SDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEAL 117 Query: 121 AALQKGKKFTPESVSRLL--EKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKK 174 + KGK + E ++ + + ++ DK L+ +E +V ++ GF +IA K Sbjct: 118 RKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATK 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 LN S+KTI + ++S KLG+++ L Y Sbjct: 178 LNLSVKTIDAFRESMKHKLGLKSAPELSQY 207 >UniRef50_C6Y2F0 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y2F0_PEDHD Length = 206 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 116/199 (58%), Gaps = 10/199 (5%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 + + DDH +V+ GIR L+ + ++ +G ++ + ++ L + V++ D+++P DK Sbjct: 7 IFVVDDHYMVIEGIRSLLQNEKTLDWMGHATNAASCLSFLKLHEPDVILMDVNLP-DK-- 63 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 GI L K +K+ +PS++++ L+ N AI+ ++D G VLK +L +A+ A+ K Sbjct: 64 SGIDLCKEVKQLYPSVAVLGLSTFNQQAIIKNMIDNGASGYVLKNATKEELLEAINAVSK 123 Query: 126 GK-KFTPESVSRLLEKISAGGYGDKRL-SPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK ++ E+ S L +I A D+ L + +E EVL L AEG EIA+KL SI T++ Sbjct: 124 GKVYYSQEAFSSL--RIPA---PDQLLITRREKEVLLLIAEGLTNAEIAEKLFISIPTVN 178 Query: 184 SQKKSAMMKLGVENDIALL 202 + +KS + K V+N L+ Sbjct: 179 THRKSLIEKFNVKNTAMLI 197 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 7/199 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH IV G+R+ +E E + V+ E + I+ + V + D+SMPG Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ + P L +++LTM+ + ++ G + K+ AP L A+ L Sbjct: 61 --DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKL 118 Query: 124 QKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G +F E + LL + S GG LS +E +VLR A G EIA + S+ Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178 Query: 180 KTISSQKKSAMMKLGVEND 198 KT+ + + + KL + N+ Sbjct: 179 KTVDTYRARLLKKLNLRNN 197 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 6/197 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + VI+ADDHP+ G++ LE+ E V +VGE D + +L V + D+ MP Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGITL + IK + ++ I+LT ++ + A L +G VLK + L KA+ Sbjct: 61 G---ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G F V+ + + A + LSP+E EVL A G E+A +L S + Sbjct: 118 QTVATGSLFLDSEVASV---VGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISER 174 Query: 181 TISSQKKSAMMKLGVEN 197 T+ + S KLG N Sbjct: 175 TVQTHLASVYDKLGAHN 191 >UniRef50_B4STD4 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STD4_STRM5 Length = 244 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 16/198 (8%) Query: 17 FGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHV--LITDLSMPGDKYGDGITLIKYI 74 G+++ L + + V G + S L+ L + A + L+ D ++P G+G+ L++++ Sbjct: 25 HGVQEVLARQAGLQVDGSYGRSGDLLQRLQQQAAAIDLLLVD-ALPMGDSGEGLELLRHL 83 Query: 75 KRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTP--- 131 RH+P++ I+VL+ + N ++S L G + K AP L +A++ + +G +F P Sbjct: 84 SRHWPAVPILVLSAHCNAGVVSLALQAGARGFLSKACAPQMLLRAVSVVARGGRFVPPEL 143 Query: 132 -----ESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQK 186 +S + + + RLS +E VL+ G E+A + R+ TIS+QK Sbjct: 144 RAQWNQSRRQRQQPVR-----PPRLSTRERTVLQWVLRGCSTGEMAHRSGRTASTISTQK 198 Query: 187 KSAMMKLGVENDIALLNY 204 ++A KLG+ ND L + Sbjct: 199 RAAYRKLGIRNDGELFRF 216 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 3/201 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M + I DDHPI G+ L + +VG+ + + +P L +++ D+SMP Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPE-- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + K FP + I++L+M+++ + +VL+ + G LK + ++ AL + Sbjct: 59 -MNGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVI 117 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + ++S LL + S + L+ +E VLRL A G E+A++L+ S++TI Sbjct: 118 HNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIE 177 Query: 184 SQKKSAMMKLGVENDIALLNY 204 + +++ KL ++ L+ Y Sbjct: 178 THRRNIKDKLAIKTSAGLVRY 198 >UniRef50_C7PEC4 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC4_CHIPD Length = 207 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 4/202 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+I+ADDH + GIR LEQ ++ V G + LI L + + I D+SMP Sbjct: 5 VNIILADDHTLFADGIRSLLEQTPYITVQGIASNGQVLIEMLQRHQPDLAILDISMP--- 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + K I++ P + I+L+ ++P ++S +G ++K DL + + + Sbjct: 62 VLNGLEVTKIIRKDMPHIRTIILSSYSDPHLISLSRSYGADGYLMKTCNQYDLLQTITRV 121 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G+ P+ + R+ E + + L+ +E E+L L + F +IA L SI T+ Sbjct: 122 VRGESCFPQ-LPRIQEAEIDHSFREFNLTRRELEILHLINQQFTNQQIATHLYLSIYTVE 180 Query: 184 SQKKSAMMKLGVENDIALLNYL 205 + +K+ M KL +++ AL +L Sbjct: 181 THRKNIMQKLQLKSPAALTRFL 202 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 9/205 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M M V++ DDH +V GIR L I V + E + + +++ D++M Sbjct: 1 MEGMRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAM- 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 D DG+ + I P + +++L+M++ L G +LK A +L A+ Sbjct: 60 -DDM-DGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAI 117 Query: 121 AALQKGKKFTPESVSR-LLEKISAGGYGDKR----LSPKESEVLRLFAEGFLVTEIAKKL 175 AA+ +G + +VSR L+ + A D+R L+P+++E+L L G EIA++L Sbjct: 118 AAVMRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIA 200 + S+KT+ + + M +LGV DIA Sbjct: 178 DLSVKTVEAHRAQIMERLGV-RDIA 201 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 6/219 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 +++++++I DDH IV G+++ LE VV E + + + I DLSMP Sbjct: 10 LHDLHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMP 69 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ LIK I+ FP + ++VL+M+ G V K GA +L A+ Sbjct: 70 G---MNGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAV 126 Query: 121 AALQKGKKFTPESVS-RLLEKISAG--GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G + S++ R++ +++ G +LS +E EVLR G +T+IA+ L+ Sbjct: 127 RKVATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHL 186 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S+KT+S+ K KL + AL+ Y + L+ D + Sbjct: 187 SVKTVSTHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDE 225 >UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae RepID=A3K876_9RHOB Length = 213 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 9/208 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +VII DDHP+V G R+ ++ + +VGE ED+ + L V++ D+++P Sbjct: 1 MRDYSVIIIDDHPVVREGYRRLIDLQPGLKIVGEAEDARSAYAAFRDLRPDVVVMDVTLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI I++I+++ I+V TM+ + A + + K P L +A+ Sbjct: 61 G---ASGIEAIRHIRQYDDGARIVVFTMHLSAAFALKAIKAGATSYITKSSDPKVLVEAI 117 Query: 121 AALQKGKK-FTP---ESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G+ +P E+++R + IS G G LSP+++E+L L A G+ IA +L+ Sbjct: 118 FGALRGQTVISPDVIEAIAR--DSISGIGTGLSDLSPRQTEILCLLARGWSAERIAGELS 175 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S KT+ + LG+E D L+ + Sbjct: 176 ISQKTVRNNHYQIKSILGLETDAQLVWF 203 >UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HV51_9SPHI Length = 214 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + I+ DDHPIV+ GI L +I + ++G+F + + L ++ITD+SMP Sbjct: 1 MNEVKTILVDDHPIVMEGIEMLLLEIPEIQLLGKFTNGKSAQEFLSVTAVDLIITDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ L K++K++ P +I+L+M++N + ++ D EG +LK+ +L A+ Sbjct: 61 E---LDGLQLTKWVKQNHPETKVIILSMHDNDHYVQEIILADAEGYLLKENTSEELVNAV 117 Query: 121 -AALQKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 L G ++ + V +L + LS +E +VL+L + EIA KL Sbjct: 118 NRVLDDGIYYSDQIVGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIADKLF 177 Query: 177 RSIKTISSQKKSAMMK 192 S T+ S KK+ K Sbjct: 178 ISRHTVESHKKNLFKK 193 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 5/211 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +++V++ DDH +V G R+ LE V+V GE D+ L V++ D+S+PG Sbjct: 4 GDISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI ++ + P +++ +++ + LD G V K AP L +A+ Sbjct: 64 ---ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVR 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYG--DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + + + +S+ L +A G ++LS +E EVLRL +G+ + IA+KL S Sbjct: 121 TIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQ 180 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+++ + K G +N + L S + L Sbjct: 181 KTVANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 9/206 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH ++ G+R LE + +VGE I +L V++ DLS+P Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNGL 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG T K I++ P + I++LTM++ + + + G +LK L +A+ + Sbjct: 62 --DGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEV 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSP-----KESEVLRLFAEGFLVTEIAKKLNRS 178 +GK F SVS+ E I+ D + P +E E++RL G+ E+A KL S Sbjct: 120 YRGKCFYKTSVSQ--EIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 +KT+ + K + M KLG+++ L+ Y Sbjct: 178 VKTVENHKTNIMQKLGLDSKHQLIQY 203 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + V++ADDHPIV G+R LE + VVGE + + L V + D+SMP Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+G+ ++ I ++LT++ L VL G V K TDL +A+ Sbjct: 63 ---GNGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIR 119 Query: 122 ALQKGKKFTPESVSR-----LLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G+ F ++ +R L+ G D + LS +E EVLRL A G+ EIA + Sbjct: 120 LVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQ 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L S KT+ + + M KLG L+ + Sbjct: 180 LFLSPKTVETYRHRVMQKLGFSRRSELVRF 209 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 9/214 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V + DDH IV G+R++L + + + VVGE + + +P L HV + D +P Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLT-MNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 G GI + + ++ P ++ ++LT +++ A+ SA++ G VLK+ DL A Sbjct: 93 D---GSGIDVCREVRSALPDVACLILTSYDDDEALFSAIM-AGAAGYVLKEIRGNDLVGA 148 Query: 120 LAALQKGKKFTPESVS-RLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKL 175 + + G+ SV+ R+LE++ G D L+ +E E+L+L A+G +I +L Sbjct: 149 IRTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRL 208 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 S KT+ + S + KLG+ + YL T Sbjct: 209 GLSEKTVKNYVSSILEKLGLASRTQAAVYLMKQT 242 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 11/211 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADDH ++ G+R ++ VVGE D AL+ + ++ A VL+ DLSMP Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ IK +K + I+VLTM+ + A+ + G + KQ ++L A+ Sbjct: 61 ---RVSGLECIKELKSRGQEIKILVLTMHGREYVKEAMAAGAL-GYIEKQALDSELFVAI 116 Query: 121 AALQKGKKF-TPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + G+++ +P++ LL+++ +A L+ +E EVL+L G +T+IA Sbjct: 117 RTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAG 176 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L+ S+KTI + K M KL + + L++Y Sbjct: 177 LLHLSVKTIDTHKTHVMEKLNLTHKSQLVDY 207 >UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1 Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO Length = 222 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 13/207 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQ---IEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 + V + DDHPI+L G+ + L Q IE V V ++ + + D VL+ D S Sbjct: 13 RRIKVGLVDDHPIILLGLEQFLSQQMDIELVFSVSTIQEYLIRVKDSAPCD--VLVIDFS 70 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP D+ DG ++ + + II+ T + ++ + I+ K + L + Sbjct: 71 MP-DEAKDGFAWLRVAQETARNAKIILFTSQLYLTKICQGKNVGVCEIIYKGDSQLALLE 129 Query: 119 ALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 ++ + + R+ ++ + RL+ KE EVL AEG V+EIA K RS Sbjct: 130 SI-------RTAADIEGRVKPEMESCDKEANRLTKKEWEVLLWIAEGMSVSEIASKKQRS 182 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYL 205 IKTIS+QK+S M KLG++ND L++YL Sbjct: 183 IKTISTQKRSVMKKLGIKNDFGLMSYL 209 >UniRef50_UPI00017463AF response regulator receiver domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017463AF Length = 251 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 10/222 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN +V+I P+V G+R E GE + + +L ++ DL +P Sbjct: 1 MNQHSVLIVHGEPLVRVGLRSLFESQRACATCGETSNPATALALATELTPRFVLLDLVLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GDG+ LIK + R PS +IV++ + + E V Q P ++ A+ Sbjct: 61 ---QGDGVVLIKDLHRFVPSSHLIVISSLVDTESVQRAFRAGAEAYVTTQDEPGEVLAAM 117 Query: 121 AALQKGKKFTPESV-SRLLEKISAGGYGD------KRLSPKESEVLRLFAEGFLVTEIAK 173 A+Q+G+++ V S LL+ +S G G RLS +E +V R+ G T IA+ Sbjct: 118 DAVQEGRRYASNRVSSSLLQDLSCGALGRPRDAEVSRLSDRELQVFRMIGRGMSSTSIAQ 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 +L S KT+ + ++ KL V N L +S S A + Sbjct: 178 ELGVSSKTVETHRQRMKDKLQVHNGAQLAQRAASWFASMAKR 219 >UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14 Tax=Pseudomonas RepID=Q48GV3_PSE14 Length = 220 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 104/202 (51%), Gaps = 12/202 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+++ DDH ++ G+R + ++ ++GE D L + +L +++ D+ M Sbjct: 2 TCNLLLVDDHSLIRAGVRALVAEMPGYAIIGETADGAQLSSLAQRLKPDIILLDIWM--- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 K DG+ ++++ + P +++L+M+ +P ++ LD+ G +LK T+L +AL A Sbjct: 59 KSVDGLEALEHLLKVQPHCKVLILSMHTDPDMIMRALDIGARGYLLKDTTATELEQALEA 118 Query: 123 LQKGKKF-TPESVSRLLEKISAGGYGDK--------RLSPKESEVLRLFAEGFLVTEIAK 173 L+ +++ +P ++E+ G D+ L+ ++ E+LRL G EIA Sbjct: 119 LRNNERYLSPAIAHTVIERALRGTRSDRARAAKERYHLTARQLEILRLIVRGKSTREIAD 178 Query: 174 KLNRSIKTISSQKKSAMMKLGV 195 L SIKTI + + M +L + Sbjct: 179 GLGLSIKTIETHRSQVMKRLQI 200 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 11/209 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++IIADDH ++ GI+ L+ ++ VVGE D LI + LD +++ D++MP Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI +I +K++ + IVL+M++NP + + +LK ++ KA+ Sbjct: 62 K---KSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAV 118 Query: 121 AALQKGKK-FTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 A+ G+K F+P+ S +L E + A + L+ +E EVL+ + G IA Sbjct: 119 KAVSAGQKYFSPDIYSIILNGLANPELVKASQIAE-TLTKRELEVLKEVSMGLSTKLIAD 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALL 202 KL S++T+ + + + M KL V N L+ Sbjct: 178 KLFISVRTVETHRINLMKKLDVHNSAELI 206 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 10/210 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V IADDHP++L G++ L + +VGE D + + LD V + DLSMPG Sbjct: 19 SRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAIDLDPDVAVFDLSMPG 78 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI +I+ + P ++V++++ + A L +L + + G +LK+ A +L + + Sbjct: 79 L---NGIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVRGIH 135 Query: 122 ALQKGKKF-----TPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G + ++V RL + S G LS +E EVL+L A G I+ K Sbjct: 136 AVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVISAK 195 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L K++ + K AM KLG + + L+ + Sbjct: 196 LEVGPKSVETYKARAMEKLGFTSRVDLIRF 225 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 6/200 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V +ADDH IVL G+++ L + + + GE D L+ L ++ +L+ DL MPG Sbjct: 9 RVALADDHAIVLEGLKQVLSGVGNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPGV-- 66 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ ++ ++ P+L I+VLT + + A +D G ++K G ++L AL AL+ Sbjct: 67 -DGLAFVERLRTRHPALRILVLTGSAGAGMAHAAIDAGANGYLVKSGDISELVPALMALR 125 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 +G+ F + G L+ +E ++L L A G +IA +L+ S T Sbjct: 126 EGRNFVAARATAPATAAP---DGIATLTRRELQILMLIARGATAGDIAAQLDISPLTARK 182 Query: 185 QKKSAMMKLGVENDIALLNY 204 +++ M KL + N ++ Y Sbjct: 183 HRENLMRKLDLHNTAEVVAY 202 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 6/197 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP++ G+R LEQ+ VVGE D I + L+ V++ DL MPG Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVT 78 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI + + P L ++VLTM+ + A + A L G VLK D A+ A+ Sbjct: 79 ---GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAV 135 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G+ +V+R + + G L+ +E E+L L A G EIA++L S K Sbjct: 136 ARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQK 195 Query: 181 TISSQKKSAMMKLGVEN 197 T+ + S KL V + Sbjct: 196 TVKNHLTSIFAKLQVAD 212 >UniRef50_B8CLF7 Regulatory protein, LuxR:Response regulator receiver n=76 Tax=Proteobacteria RepID=B8CLF7_SHEPW Length = 219 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 14/203 (6%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL---PKLDAHVLITDLSM 59 N+N+IIADDHP+ +R++L + N DS + NL ++ V++ DL M Sbjct: 5 NLNIIIADDHPLFRNALRQALA-TAFTNTQWFEADSADALQNLLDNSDIEYDVVLLDLQM 63 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG G + + +++ H+ L ++V++ + + +S + G + K + L A Sbjct: 64 PGSH---GYSTLIHLRTHYQELPVVVISAHEDNTTISRAIHYGSSGFIPKSSSMETLATA 120 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKK 174 L A+ G + PE V L+++S G L+P++ +VL++FAEG L +IA Sbjct: 121 LEAVLFGDVWLPEGVE--LQEVSDDGTDQMASKLSDLTPQQYKVLQMFAEGLLNKQIAYD 178 Query: 175 LNRSIKTISSQKKSAMMKLGVEN 197 L S TI + + KLGV N Sbjct: 179 LGVSEATIKAHATAIFRKLGVRN 201 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 19/207 (9%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL------PKLDAHVLITDLSMP 60 ++ DDH IV GIR LEQ + + ++ E D +++ L P L +++ D+S+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + I R + ++ +++L+M+NN + ++ G +LK + ++ KA+ Sbjct: 61 G---MSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAI 117 Query: 121 AALQKGKKFTPESVSRL--------LEKISAGGYGDK--RLSPKESEVLRLFAEGFLVTE 170 + G+K+ V+ + L+K G ++ +LS KE E+L+ +G E Sbjct: 118 RTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSRE 177 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVEN 197 IA+KL S++T+ + + + M +L V N Sbjct: 178 IAEKLQLSVRTVDNHRANMMRRLQVRN 204 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 14/205 (6%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +V+I DDHP+V IRK+LE + +VGE D + +N + L ++I D+S+ + Sbjct: 4 SVLIVDDHPVVCEAIRKTLES-QGYTIVGETADGISALNMILSLRPDIVILDVSL---EK 59 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+T++K I + + ++V T + L G V K T L KA+ + Sbjct: 60 MDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASGFVSKNEPLTKLLKAVDTIV 119 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +G F P+ S GG G L+ +E EVL+L AEG EIA+KL+ S Sbjct: 120 EGYVFFPKKSM----PFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLS 175 Query: 179 IKTISSQKKSAMMKLGVENDIALLN 203 KT+S K + + KLGV + + L+N Sbjct: 176 NKTVSGHKINILSKLGVTSVVDLVN 200 >UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY0_BRAJA Length = 225 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 16/214 (7%) Query: 7 IIADDHPIVLFGIRKSLEQ-IEWVNVVGEFEDS----TALINNLPKLDAHVLITDLSMPG 61 +IADDH V G+R LEQ +W VV E D TA I + P HV I D SMP Sbjct: 21 LIADDHEAVRLGLRAVLEQRADW-EVVAEANDGSKALTAAIESRP----HVAIVDFSMP- 74 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ + + I+ + +++ T++ + + + + K A L A+ Sbjct: 75 --RMTGVEVARRIRDYPLQTEVLIFTVHKSGLLAQQAFEAGARAFLTKSDANRSLLAAVD 132 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 AL K+F ES L+ AGG D+ L+P+E V++L AEG+ I+ LN S+ Sbjct: 133 ALLVHKRFCSESCRNELDH-GAGGEADRGRGLTPREQLVVKLVAEGYSNKGISAILNLSV 191 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 KT + + +AM KL V + L+ Y L A Sbjct: 192 KTTEAHRAAAMRKLDVNSTAGLVRYAVRAQLVEA 225 >UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis RepID=A5LFV2_PORGI Length = 227 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 51/219 (23%), Positives = 111/219 (50%), Gaps = 21/219 (9%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWV-NVVGEFEDSTALINNL-PKLDAHVLITDLSMPG 61 +++++ DDH + G+R ++ Q++ + +VGE L L + + ++I D+ +P Sbjct: 2 ISIVLVDDHELYRVGLRAAISQMQGLAEIVGECSSCEELETFLKEQKEPGLIILDIWLPD 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+G+ + + +K+ +P++ II+L+ + ++ +L +D+EG + K D+ A+ Sbjct: 62 ---GNGVNIARKLKKLYPAVKIIILSSEVSEKTVNELLAIDVEGYICKTAQINDIGNAIR 118 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGD----------------KRLSPKESEVLRLFAEG 165 + G F +SVS+++ I D L+ +E EV++ +G Sbjct: 119 TVTTGSHFYGKSVSKMILDICVSRSADQSHKKSKKQQQQQNDSSELTQREKEVVQYLCDG 178 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 + E A+K++ S +T+ + + + + KLG N L+ Y Sbjct: 179 YSAKETAEKMHLSYRTVETHRSNILHKLGFSNAAELIRY 217 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 7/196 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHP+V G R+ LE + VVGE E I +L V++ D+SMPG Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG-- 72 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + IK P + I+VLT ++ A + A+L+ G +LK + +L A+ A+ Sbjct: 73 -MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 124 QKGKKFTPESVSR-LLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+ +V+R +LE+ S + LSP+E EVLR+ A G EIA+ L+ S Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 180 KTISSQKKSAMMKLGV 195 +T+ + KLGV Sbjct: 192 RTVQVHLANIFSKLGV 207 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 14/220 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + + DDH + L GIR L++ + V L+N L A V++TD+ MPG Sbjct: 2 IRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVELLNLLKTTRADVVLTDIRMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++L + I R FP+ +I LTM ++ + +LD G ++K +L +A+ + Sbjct: 60 -MDGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G + +SR I + RL+ +E +VL L A+G +IA+ L Sbjct: 119 ARGDYY----LSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKL 174 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSS-VTLSPADKD 216 S TI + +K+ K+G+ ++I LL S + +P D D Sbjct: 175 SRFTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTD 214 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 17/218 (7%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +N++I DDHP+ GIR SLEQ +VGE D + + +L V++ DLS+P Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ + + +KR P +I+LTM+ + L + K P L + Sbjct: 61 G---MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVI 117 Query: 121 AALQKGKKFTPESV-------SRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGF 166 + +G+ E V SR+L++ D+ L+P+E E+L A G+ Sbjct: 118 TRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGY 177 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 EIA+ LN S +T+ + S + KL V + + Y Sbjct: 178 SNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIY 215 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 11/212 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++ DDH + G+R L + V GE ++ + +L V++ D+ M Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G + LI+ + P + +I L+M ++ L+ +D+ G +LK L A+ Sbjct: 61 GMSSFEATRLIR---KERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAI 117 Query: 121 AALQKGKKF-TPESVSRLLEKISAGGYGDKRLSPK-------ESEVLRLFAEGFLVTEIA 172 +Q+G + +P +SRL++ G G SP+ E E+L++ AEG V EIA Sbjct: 118 REVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+ + K + M KL + N L+ Y Sbjct: 178 AFFELSVKTVEAHKFNLMRKLDIHNKAQLVQY 209 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 20/217 (9%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDH +V GIR LE + +VGE D I+ L + VL+ D++MP Sbjct: 3 IRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMP--- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI +K I + +P++ ++ +M++NP + + G +LK ++ +A+ + Sbjct: 60 RMSGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRTV 119 Query: 124 QKGKKFTPESVSRLL-------------EKISAGGYGDK----RLSPKESEVLRLFAEGF 166 G + P + S ++ E AGG K R++ +E +VL +G Sbjct: 120 VDGDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDGM 179 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 EIA+K S T+++Q+ S + K GV+N L+ Sbjct: 180 SSPEIAEKFGISPNTVANQRASIIRKAGVKNTADLIR 216 >UniRef50_C5BYM0 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYM0_BEUC1 Length = 209 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 6/200 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +++ DDHP+V GIR L + ++VVGE + + + +++TDL MPG Sbjct: 2 SIRIVVVDDHPVVRDGIRGQLATTDDLDVVGEAASADEALAVVAATSPDLVVTDLRMPGG 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G++LI ++ P ++++VLT + P + LD G VLK +L +A+ A Sbjct: 62 ----GVSLITHLAASAPGVAVLVLTTYDTPDDVLPALDAGARGYVLKDAPREELFRAVRA 117 Query: 123 LQKGKKFTPESVSRLL-EKISAGGY-GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G+ F SV+ LL ++ A LS +E +VLRL A+G + A+ L + Sbjct: 118 VADGETFLAPSVAGLLVSRVRARQQPAPAALSGREVDVLRLVADGRTNRQAAQLLGVTEA 177 Query: 181 TISSQKKSAMMKLGVENDIA 200 T+ + KLGV + A Sbjct: 178 TVKTHLLHVYAKLGVPDRAA 197 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/212 (29%), Positives = 113/212 (53%), Gaps = 16/212 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEF---EDSTALINNLPKLDAHVLITDLSMP 60 +N+++A+DH +V GI+K LE E +N+V E + LI + +D +L+TDL+MP Sbjct: 10 LNLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSID--LLLTDLNMP 67 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +GI+LI +K P++ +++L+M+++ ++ G +LK ++ AL Sbjct: 68 GI---NGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFAL 124 Query: 121 AALQKGKKFTPESVS-----RLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 + +G + ++S ++L++I+ A S +E E+L L AEG E+A Sbjct: 125 KYISRGGSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMA 184 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 +L S +T+ ++S K G N AL+ Y Sbjct: 185 DRLFISKRTVEGHRQSLTDKTGCRNTAALIRY 216 >UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ83_ACIBL Length = 233 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN +++ADDH +V +K LE E+ VVG D AL+ +L V+I D+ MP Sbjct: 21 MNRTRILLADDHNLVAELCKKLLE-TEY-EVVGIATDGRALVRAAVELKPDVIIADVGMP 78 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + +K+ P++ II LTMN +P I + ++K A +++ ++ Sbjct: 79 ---LLNGLDAAQQVKQKLPTVKIIFLTMNPDPDIAAEAFRRGASAYLVKTSAASEVVASV 135 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +GK + ++ R + +S + +L+ ++ EVL+L AEG + E+A L Sbjct: 136 REVLRGKTYVSPTIPREMIDLSLWQHKKLVDETHKLTDRQREVLQLLAEGKGMKEVAAIL 195 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 N + +T++ K M LG +N+ L+ Y Sbjct: 196 NMTTRTVAFHKYRIMEVLGTKNNADLVKY 224 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +IIADDH I G+R+ L + +VGE + L+ L + +++ DLSMPG Sbjct: 3 RIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGIS- 61 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 GITL++ + + IIVL+M+ + L +G V K A L A+ + Sbjct: 62 --GITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVS 119 Query: 125 KGKKFTPESVSR---LLE-KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G+ F + S+ L E + S RL+ +E EV + G ++ IA+ L+ SIK Sbjct: 120 QGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+S+ K + + K+ E L+ Y Sbjct: 180 TVSTHKTNLLAKMDAETTADLVRY 203 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 6/206 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V+IADDH I+ G+++ L + E + VV + +++ I V++ D+S+P Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLP- 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 D+ GI IK+ P +++++L+M+ A L G + KQ A L A+ Sbjct: 64 DR--SGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIR 121 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYG---DKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KGKK+ V+ L +GG LS +E + L + A G V+EIA+ L+ S Sbjct: 122 TVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLS 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 +KT+S + + KL + ++ L +Y Sbjct: 182 VKTVSMYRARLLEKLNLRHNAELTHY 207 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 12/212 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLE---QIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 + V IADDH +V GI L +E+V +++ L++ + VL++DLSMP Sbjct: 21 VTVAIADDHHVVRQGIEALLRMCPDMEYVGGASTVDEARQLVH---RTRPDVLVSDLSMP 77 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G G+ ++ ++R P I+VLTM+ + D V K A L + Sbjct: 78 G---GSGVGFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGAHAFVAKDDAFDTLVSII 134 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G++F SR +++++ G RL+P+E EVL+ +G EI +L S K Sbjct: 135 RRVHSGEEFL---FSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPK 191 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T+ + M K V L+++ + + P Sbjct: 192 TVEVYRGRLMKKFNVTKGTELIHHAVASGIVP 223 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 12/208 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++ADDH I+ G+R + + VVGE T ++ + + VL DLSMP Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G T+ + + + P ++VLTM+N+PA + + L G LK DL A+ Sbjct: 61 G--WGSATTITR-VTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGG----YGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ G + ++ +L GG +LS +E+EVL L +G EIA +L Sbjct: 118 RAVATGARVIDPALGDVL-----GGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLF 172 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+ + + K G++ + Y Sbjct: 173 LSVKTVETYRARLREKTGLKTRADYVRY 200 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 7/194 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDH +V G+R LE ++VVGE D + + + V++ DLSMP Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I P ++VLT ++ + VL G VLK P DL A+ A Sbjct: 59 VMDGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAA 118 Query: 124 QKGK-KFTPESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G+ P LL SAGG RLSP+E++VLRL A+G ++A+ L + +T Sbjct: 119 ARGEVPIDPRVAGALLP--SAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 182 ISSQKKSAMMKLGV 195 + + ++GV Sbjct: 177 VKAHLGRVFREIGV 190 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 103/203 (50%), Gaps = 16/203 (7%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++IIA+DH ++ G++ L+ + + V GE D ++ + +++ D+SMP Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMP---R 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ + IK+ P + ++VLT++ + A L +G VLK + + A+ ++ Sbjct: 63 MDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVL 122 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKR----------LSPKESEVLRLFAEGFLVTEIAKK 174 GK + VS + + G D R L+P+E E+ +L AEG+ EIA+ Sbjct: 123 GGKIYLSPGVS---DAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEM 179 Query: 175 LNRSIKTISSQKKSAMMKLGVEN 197 L S+KT+ + + M KLGV + Sbjct: 180 LVVSVKTVEKHRSNLMQKLGVHS 202 >UniRef50_A8UHM3 Two-component response regulator n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHM3_9FLAO Length = 217 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 109/204 (53%), Gaps = 7/204 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ + I DDH +VL GI+ L+ + V VV F ++ + L L VL+ D+++P Sbjct: 8 SIEIAITDDHELVLEGIKSMLQDTKEVEVVSTFSNAKQTLKGLDDLSVEVLLLDINLPD- 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI L K + + FP L II LT +++ + +L + G +LK +L +AL Sbjct: 67 --TNGIDLSKQLLKKFPDLKIIALTSHDDASFAKRMLKNGVHGYLLKNTDKIELLRALKT 124 Query: 123 LQKGKKFTPESVS-RLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+ + + +S RLL + S A + +L+ +E EVL +E +I++KL S Sbjct: 125 VLSGEIYLQKDMSDRLLYQRSKPKAKNGLNIKLTRREHEVLIAISEELTTQQISEKLFIS 184 Query: 179 IKTISSQKKSAMMKLGVENDIALL 202 KT+ + + + ++K G +N + ++ Sbjct: 185 PKTVETHRSNIILKFGAKNSVGII 208 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 6/201 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHPI+ G+R L+ E VVG+ D L +++ DL++ GD Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL-AA 122 DG+ L + + PS +++V T ++ A LD G +LK P +L A+ A Sbjct: 62 --DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTA 119 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G +P SRL++++ A + L+P+E EVL L A G ++ ++L S T+ Sbjct: 120 RDGGSALSPAVASRLMDRMRA---PQESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 183 SSQKKSAMMKLGVENDIALLN 203 + KLGV+ A ++ Sbjct: 177 KTHVNHIFTKLGVDTRAAAVS 197 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 6/205 (2%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN + V+I DDHP+V GI+ LE + VVG I L V++ DL+M Sbjct: 20 MNGPIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNM 79 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P G G++ + I+ P + +++L+M+++P ++ L G VLK P ++ A Sbjct: 80 P--DVG-GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTA 136 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + A+ +G+++ + L S + L+ +E +L A+G E+A+ L+ S+ Sbjct: 137 IDAVMRGEQYLCTGAAGSLSPQSQ--TSREALTGREQTILLELAQGKSNKEVAQALDISV 194 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 +T+ + +K+ KLG+ + L Y Sbjct: 195 RTVETHRKNIKRKLGISSTAGLTRY 219 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 5/203 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDH IV G+++ + + V E + +++ L +L+ D++MPG Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGIS 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ LI+ ++ P+L ++VL++++ + S L G + K P L A+ L Sbjct: 62 ---GVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKL 118 Query: 124 QKGKKFT-PESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G +F P+ V ++ + G + LS +E +VL++ A G + EIA S KT Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNY 204 IS+ K M KLG+ N+ ++ Y Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRY 201 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 10/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ +DH IV G++ L E + VVGE D A + +L V++ D++MP Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ + I+ + +++L+M + + + G +LK +DL A+ Sbjct: 62 --KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGFLVTEIAKK 174 + G F +V+++L + S G K L+ +E EVL L EG EIAK Sbjct: 120 EVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKI 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L S+KTI + M KLGV N L+ + L A+ Sbjct: 180 LGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 17/212 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH ++ G++ L + V+GE D I+ + L +++ DL+MP Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPK-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ I+ + + L I+VLTM+++ L AVL + +G VLK+ A +L A+ + Sbjct: 63 -LNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 124 QKGKKF-----TPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +G+ F E V R L EK S K+LS +E EVLR A G +IA Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKL---KQLSERELEVLRNLALGHTNQDIA 178 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 L+ S+KT+ + K M KL + L+ Y Sbjct: 179 DLLHVSVKTVETYKARVMEKLEMHKRAELVRY 210 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 6/204 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IA+D +V G+ +L ++ V +VGE ED I L V++ DLSMP Sbjct: 2 TVRILIAEDQQLVRQGL-VALLAVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + IK+ P + ++VLT+ N ++ L +G LK+ +L A+ A Sbjct: 59 -ELDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINA 117 Query: 123 LQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + GK + +S L E + G L+ +E EVL+L A G EIA +L +IK Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + M KL + N L Y Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAY 201 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+R LE+ + VVGE + ++ + V++ DL + + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + + P + +++L+M ++ ++ L+ G VLK+ +L A+ + Sbjct: 63 --NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLV 120 Query: 124 QKGKKF-TPESVSRLLEKIS-------AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 +G+ + P+ R++E + A L+ +E EVLRL AEG EIA++L Sbjct: 121 ARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+ + + + M KLG+ + + L+ Y Sbjct: 181 VISVKTVQAHRANIMQKLGLHDRVDLVKY 209 >UniRef50_C4ZL17 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZL17_THASP Length = 213 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 13/210 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVN-VVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 M ++I DDHP++ FG+R+ + Q W + V+GE + + + + + DLSMP Sbjct: 1 MKLLIVDDHPVMRFGVRQLVTQ-RWPDAVIGEASCLAQALEQVRAAEWELAVLDLSMPDT 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ + + R P ++VL+M++ A + L L G + K+ A T+L A+ Sbjct: 60 S---GLEGLVRLHRAAPLTRLLVLSMHDEAAYAARALQLGAAGYLTKEHATTELVAAIER 116 Query: 123 LQKGKKF-TPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKLN 176 ++ G+++ + + +RL + +S G R LS +E VL L A G +EIA+ ++ Sbjct: 117 VRSGQRYISSDLAARLADLLS--GEAPARAPHETLSAQEYRVLLLIAAGHGASEIAEIMH 174 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLS 206 S+KT+ + + + K G+ N + Y S Sbjct: 175 LSVKTVGTYRSRIIDKTGLANTAEMARYCS 204 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 9/209 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHP+V G ++ L E + +VGE ++ + V+I DL+MP D Sbjct: 5 IKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDA 64 Query: 64 YGD--------GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTD 115 + G+ I+ I H P ++VLT + V++ +G + K+ AP + Sbjct: 65 NTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDE 124 Query: 116 LPKALAALQKGKKFTPESVS-RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 L +A+ A+ G+++ E + R+ E SA G L+ +E ++ L AEG V+ +A++ Sbjct: 125 LLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVAEE 184 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLN 203 + S KT+ + + + KL + N+ L++ Sbjct: 185 MFLSPKTVHAHRTNIFRKLKISNNSELVH 213 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 7/208 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V+I DDH ++ G+R L E + VVGE D + I K+ V++ D+SMP Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ +K + + P L +I+LTM+ + + L G VLK+ A L +A+ Sbjct: 61 E---MSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAV 117 Query: 121 AALQKGKKFTPESVSR-LLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ G+ + S+++ ++ +++ D K LS +E +VL L A G+ EIA++L Sbjct: 118 RAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLV 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S+KT+ + K M KL + L+ + Sbjct: 178 ISVKTVETYKYRIMEKLNCKKRSDLVKF 205 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 9/193 (4%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 +I DDH ++ GI+ L+ V E E + L + ++I D+SMPG Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPG---MG 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ I+ I+ H+P++ I+VL+M+ + + + G + K A +L AL L +G Sbjct: 58 GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQG 117 Query: 127 KKF-TPESVSRLLE---KISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +++ +P + L++ + + D R L+ +E EV G+ +TEIA++L+ S+K Sbjct: 118 RRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVK 177 Query: 181 TISSQKKSAMMKL 193 T+ + KK KL Sbjct: 178 TVDTHKKHIYEKL 190 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ DDH ++L GI+ LE V+G ++ ALI +L +++ D+SMP Sbjct: 1 MRKLRILLGDDHAMILSGIKGLLEG--HYEVIGSEKNGRALIETAVRLKPDLVVLDVSMP 58 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI + IK+ P+ +I LTM+ N L L G VLK GA +L A+ Sbjct: 59 ---ILNGIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAI 115 Query: 121 AALQKGKKFT-PESVSRLLEKISAGG---YGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + KG + P+ ++E I + G G L+ ++ +L+L AEG EI + + Sbjct: 116 EEVCKGYIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAH 175 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S++T+ + M +LG + L + Sbjct: 176 ISVRTVEFHRSRLMSRLGAHSVAELTRF 203 >UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVN1_9SPHI Length = 208 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 110/212 (51%), Gaps = 10/212 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + +ADDH + GI L++ + + + G + + LI++L V++TDL+MP Sbjct: 2 IRIALADDHKLFAKGIESLLDEYDDLLITGIYPNGKELIDSLKMDLPDVILTDLNMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG ++K K+ FP + +IVL+M ++ I + + +LK P +L + + Sbjct: 59 VLDGFGVLKSSKKAFPKIKVIVLSMYDDEKIYKKCMKEGADAFILKDADPDELVYTIHEV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK-----RLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ + R++++ + + D +LS +E ++++L +G EIA L+ S Sbjct: 119 YDGRHIA--NFQRVIQQANQSSFYDAFREKFKLSRREVQIIKLIKDGMQNKEIADDLSLS 176 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 ++TI + +K+ KL V + I L+N + + L Sbjct: 177 VQTIETHRKNIHSKLHVSSRIELVNKVQDMNL 208 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 10/208 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 + + DDHP++ G+R + + V+GE DS + KL ++I D+S+ G+ Sbjct: 43 RIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRPDLVIADISLRGN-- 100 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 GI LIK +K P + ++V++M + VL V+KQ T + A+ + Sbjct: 101 -SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRRAR 159 Query: 125 KGKKFTPESV-SRLLEKISAG---GYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ F E V +++L + G G D LS +E E++ L EG EIA KL Sbjct: 160 NGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKLFL 219 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYL 205 SIKT+ + + KL + N L+ + Sbjct: 220 SIKTVETHRVHIKRKLNLANATQLVQFC 247 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 10/200 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ ++IADDH ++ G+RK L ++VVGE + ++ K +++ D++MP Sbjct: 4 SIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMP-- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + IK+ P++ II LT+++ L ++ I G VLK P L K + Sbjct: 62 -IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILG 120 Query: 123 LQKGKKFTPESVS-RLL---EKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKL 175 + +G+ F P S++ R+L ++S+G Y +K+ L+ +E EVL+ A+G IA L Sbjct: 121 VAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANAL 180 Query: 176 NRSIKTISSQKKSAMMKLGV 195 S KT+ + + K+GV Sbjct: 181 YISEKTVKNHLTNIFQKIGV 200 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 5/202 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ DDH IV G R L++ + + V+ E D T + K +++ D+S+PG Sbjct: 3 NVITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I++ I+V +M+ NP+ G + K P DL +A+A Sbjct: 63 QS---GLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIA 119 Query: 122 ALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + K K +++ L EK+ L+ +E E+LRL + +IA+ LN S Sbjct: 120 EVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISP 179 Query: 180 KTISSQKKSAMMKLGVENDIAL 201 KT+S+ KLGV +DI L Sbjct: 180 KTVSNSHYIIKKKLGVSSDIEL 201 >UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZJS0_9SPHI Length = 223 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 14/213 (6%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA--HVLITDLS 58 MN + + IADD + G+ + Q + + E E L+N L + D V++ D+ Sbjct: 1 MNTITIAIADDQQLFREGLTFIIHQHADLKIALEAEHGQDLLNQLAQADKLPEVILMDIK 60 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP DG+ K +K+ +P + II LT+ + + +LDL + G + K + D+ K Sbjct: 61 MPQ---MDGMECAKILKQRYPKIKIITLTVYDQEDYVLHLLDLGVNGYLRKLTSGQDVCK 117 Query: 119 ALAALQKGKKFTPESVSRLL-------EKISAGGY--GDKRLSPKESEVLRLFAEGFLVT 169 A+ + + + + V++++ +IS+ D ++P+E EVL L + + Sbjct: 118 AIRTVCEKGYYFDDFVTQIMLSGLKRKRQISSKPKVDDDVHMTPREREVLALILKEYTTQ 177 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 EIA +L SI+T+ + +K+ + K GV+N + L+ Sbjct: 178 EIADQLFVSIRTVETHRKNLLTKFGVKNVVGLV 210 >UniRef50_A8H3B9 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=A8H3B9_SHEPA Length = 210 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 12/206 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +IIADDH IV GI + +E+ V + ++ LI + ++ITD+SMPG + Sbjct: 16 TIIIADDHQIVSEGIARLVEKNYQVQSITT--NAEELIQAAKQFQPDIIITDISMPGMQL 73 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 + L+K R II LTM++ IL A + +G ++K A +L +AL + Sbjct: 74 NQTLGLLK---RTCKEAKIICLTMHDEAEILQAAFEYGADGYIVKHQAGFELLQALETVL 130 Query: 125 KGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 GK++ + L EK + L+ ++ ++L+L A+G +IA LN S KT+ Sbjct: 131 AGKQYVS---AELQEKFNQKTV----LTARQLDILKLLAKGMSAKKIALSLNISAKTVEY 183 Query: 185 QKKSAMMKLGVENDIALLNYLSSVTL 210 K + +L ++N +L+ Y S L Sbjct: 184 HKYKMIEQLDLDNASSLVAYAHSRNL 209 >UniRef50_A4YPG2 Putative two-component response regulator, lux-R family n=2 Tax=Bradyrhizobium RepID=A4YPG2_BRASO Length = 211 Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 4/195 (2%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DDHP+V+ R L + + + E D+ + + I DL + G+ Sbjct: 3 RVLLVDDHPVVITACRWLLNE-AGIGTLTEAHDAESAYAAYVREQPDAAIVDLRLRGEDL 61 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G GI LI+ ++ H P I+V +M +P I+ + +D G +LK P +LPKAL ++ Sbjct: 62 G-GIGLIERMRSHDPQARILVFSMLGDPRIVRSAIDAGASGYLLKDAPPQELPKALEQVR 120 Query: 125 KGKKF-TPESVSRL-LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G + P+ R+ + + A G L+P+E + L L A+ IA +L S KT+ Sbjct: 121 TGGTYLDPQLAMRIAMLRQDADGAAQTSLTPRERQALALLAQAKSYQAIADQLGISYKTV 180 Query: 183 SSQKKSAMMKLGVEN 197 + KLG + Sbjct: 181 INLTYRLRQKLGARS 195 >UniRef50_Q89DY1 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY1_BRAJA Length = 211 Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Query: 5 NVIIADDHPIVLFGIRKSLE-QIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++IADDH +V G+R +E Q W+ V GE + + + + ++I D SMP Sbjct: 3 RILIADDHAVVRSGLRAIVETQSNWI-VAGEATNGEQAVGLAVETMSDIVIVDYSMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + + +K +++LTM+ + +LS + + G + K A L A+ AL Sbjct: 59 LMNGLEVSRRLKALDLRTEVLILTMHEDEELLSEAVLAGVRGFLFKSDAKKHLISAIEAL 118 Query: 124 QKGK-KFTPESVSRLLE--KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ FT V +LL +++ G D L+ +E V++L AEG ++ L S+K Sbjct: 119 LDGRPYFTSALVEKLLHDYQLNKHGRSDMLLTSREQSVVQLIAEGHTNRSMSVILKLSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + SAM KLG+ + L+ Y Sbjct: 179 TVETHRASAMRKLGMSSTAELVRY 202 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 3/204 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +NV + DDH +V G + L + VVG++ + +L KL+ V + D++MP Sbjct: 1 MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + G++L+ +++ P+ I+L++ + A + + LD G + K+ P +L +A+ Sbjct: 61 DES---GLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G + R L + L+P+E E+ L G V IA++L+ S K Sbjct: 118 RAVHAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + + KL + L+++ Sbjct: 178 TVHVHRANVLDKLHCATTVELVHF 201 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH IV G ++ LE + VV E D +N L V++ DL +PG Sbjct: 2 TIRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGM 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ LI +++ + ++ +M+ + ++ L G V K AP+ L A+ Sbjct: 62 ---GGLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVRE 118 Query: 123 LQKGKKF-----TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +G++ + E S LL+ + +G LSP+E EV+RL G EIA+ L+ Sbjct: 119 VNQGRRVLSPDVSGEVASALLDPQDSAAHG---LSPREFEVMRLLVGGRTPQEIAQSLSL 175 Query: 178 SIKTISSQKKSAMMKLGVENDIAL 201 S+KT+ + KLG +D L Sbjct: 176 SVKTVHNVHYQIKSKLGTASDFEL 199 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 106/204 (51%), Gaps = 6/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH + G+R+ LE VGE + L VL+ D+SM G Sbjct: 2 LRILLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQ- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + + + +K P L ++VL+M + + L + K+ AP +L +A+ ++ Sbjct: 61 --NSLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSV 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+++ + ++ +L + ++ GG G +RLSP+E E+ A V+EIA++L S+K Sbjct: 119 LAGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+S+ + + K+ + ++ L+ Y Sbjct: 179 TVSTYRGRILEKMALRSNAELMQY 202 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 6/197 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDHP++ G+R+ LE E + VV E D IN LD +L+ DL+MPG Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I+R ++ I+VLT++++ + VL L + G +LK P L ++ + Sbjct: 60 -VNGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKV 118 Query: 124 QKGKK-FTPESVSRLLEKI--SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ +P +LL ++ LS +E ++L +G EI + L S K Sbjct: 119 HSGQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEK 178 Query: 181 TISSQKKSAMMKLGVEN 197 T+ + S KL VE+ Sbjct: 179 TVKNHLSSIFRKLAVED 195 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVG-EFEDSTAL-INNLPKLDAHVLITDLSMPG 61 + VIIADDH +VL G+ ++ + V+G + A + L +LD + + D+ MP Sbjct: 7 IKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ + I+ +P++ +++LTM+NN + + ++ G +LK ++L A+ Sbjct: 66 --VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNAIR 123 Query: 122 ALQKGKKFTPESVSRLL-----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+++ ++V+ L E A +L+ +E EVL L +G EI+K+L Sbjct: 124 TIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQLF 183 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLS 206 + T+ + +++ + KL V+N L+ Y++ Sbjct: 184 IADTTVETHRRNLIDKLEVKNSKELILYVA 213 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 9/204 (4%) Query: 4 MNVIIADDHPIVLFGIRKSL---EQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 + +I+ADDH I G+ L +++E V G +D+ LI +L + V + D+SMP Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDL---NPDVALLDISMP 58 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ ++K + +++LTM+++P + G V+K A ++L A+ Sbjct: 59 G---LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAI 115 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ GK+F E V+ + ++ +LSP+E EV+RL A+G EIA+ L S K Sbjct: 116 LAVAAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPK 175 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + M KL + ++ Y Sbjct: 176 TVDTHRTRLMRKLNLHTTADVVRY 199 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 4/195 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDHP VL G++ L E + +VG + I + KL+ V + DL +PG Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + IK+ P +I+L+ N + +D V+K P L +A+ A Sbjct: 60 -LNGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAA 118 Query: 124 QKGKK-FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 ++G+ TP +++++ + G + L+P+E EVL G +IAK L S T+ Sbjct: 119 RRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 183 SSQKKSAMMKLGVEN 197 + + + KL V++ Sbjct: 179 KTHVSNILKKLDVKD 193 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 15/214 (7%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +N+++ DDH IV GI+ +L+ + ++VGE + I + +L V+I D++MP Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI I + +P +++L+M++N + ++ G +LK + KA+ Sbjct: 61 E---MSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAI 117 Query: 121 AALQKGKKFTPESVSRLL-----------EKISAGGYGDK-RLSPKESEVLRLFAEGFLV 168 A+ G K+ ++S +L + I +G D+ L+ +E +L++ +G Sbjct: 118 TAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNN 177 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 EIA L SI+TI + + + M KL V+N + L+ Sbjct: 178 REIADGLGISIRTIETHRANIMKKLKVKNAVELV 211 >UniRef50_Q21Y82 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y82_RHOFD Length = 230 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 6/195 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V + DDH I+ G+R LE + VVGE D T + +L ++ VL+ DL++ G++ Sbjct: 3 GVYLVDDHQIMREGLRALLE-AKGHKVVGESADPTEALADLLRMRPEVLLLDLNL-GERS 60 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G + L + +RH P+ +VLTM+ P ++ L + G VLK A +DL A+ A Sbjct: 61 GFEL-LAELQRRHLPT-RCVVLTMSAQPRQVAEALRMGASGYVLKGSAVSDLLSAVDAAV 118 Query: 125 KGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +GKK V+ L ++ D LSP+E +++ + +G ++I +L+ S KT+ Sbjct: 119 RGKKHLGAEVADLALQVFTLKDEDPLSTLSPREQQIIIMVVKGASSSQIGTQLHLSPKTV 178 Query: 183 SSQKKSAMMKLGVEN 197 ++ + M KLGV + Sbjct: 179 ATYRSRLMAKLGVRD 193 >UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 Tax=Xanthomonadaceae RepID=B2STP5_XANOP Length = 215 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 7/202 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V + DDH +V G++ L + V VVGE E A + + +L +++ DL +PG Sbjct: 2 TIRVFLIDDHALVRTGMKMILSKEVDVCVVGEAESGEAALPQIRQLKPDIVLCDLHLPGV 61 Query: 63 KYGDGITLI-KYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ + + +K + + IIV + + P + +L+ G V K G +L +A+ Sbjct: 62 S---GLEITERIVKGDYGTRVIIVSVLEDGP-LPKRLLEAGASGYVGKGGDAHELLRAVR 117 Query: 122 ALQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G+++ ++++ L + GG LSP+E EV L +G +IAK+LN S Sbjct: 118 EVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLSA 177 Query: 180 KTISSQKKSAMMKLGVENDIAL 201 KTI++ K K+G++++IAL Sbjct: 178 KTINTHKARLFEKVGIQDNIAL 199 >UniRef50_D2L4S6 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4S6_9DELT Length = 221 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 7/210 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN +++II DDH IV G R L I V VVG + + + V + DL +P Sbjct: 8 MNMISLIIVDDHEIVREGTRYFLSGIPTVRVVGMAATPGEALQLVARYYPDVALVDLGLP 67 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + G G LI+ IK H P + I+ T + + + + L +G +LK + +L A+ Sbjct: 68 SLEIGRG--LIEDIKAHHPRVKILAFTAHEDALAIHSSLAAGADGYLLKTASTDELATAI 125 Query: 121 AALQKGKKF-TPESVSRLLEKI---SAGGYGDK-RLSPKESEVLRLFAEGFLVTEIAKKL 175 A+ GKK+ +P+ + +++ G +G K LS +E EVLR E EI + L Sbjct: 126 MAVATGKKYLSPDVSANVVDGFVNPDGGSHGSKVNLSRREREVLRFVMESRGNKEIGELL 185 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYL 205 S +T+ K S KL + D+ L Y Sbjct: 186 FISHRTVEKHKASLKKKLLCDTDVELAIYC 215 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 107/211 (50%), Gaps = 10/211 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDH +V G+R LE V+G+ D ++ + V++ D++MP Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +GI + I P +I+ L+M+++ + + L +LK A DL A+ Sbjct: 61 G---LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGFLVTEIAK 173 A+ +GK F ++S++L + +++ L+ +E EVL+L AEG E+A Sbjct: 118 IAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAA 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 LN S+ T+ + + + + KL + + L+ Y Sbjct: 178 ILNLSLYTVETHRGNILQKLNLHSGAELILY 208 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 6/194 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++++ADDHP+ G+ + + E +N++GE D + KL V + D+ MP Sbjct: 2 ISIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGIT+ + +K +I+LT N + A L G ++K A +L +AL ++ Sbjct: 59 EMDGITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + +++ + + ++LSP+E EVL L ++GF V E+A KL + +T+ Sbjct: 119 IGGGIYLDSAIAN---SVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERTVQ 175 Query: 184 SQKKSAMMKLGVEN 197 + S K G +N Sbjct: 176 AHLSSVYAKFGAKN 189 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 14/205 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHP++ +R LE+ + VVG ED I +L +++ D+ MP Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDMP--- 414 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI+ + IK +P + I++LT + L ++G +LK P +L + + + Sbjct: 415 IVDGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRTV 474 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGDK----------RLSPKESEVLRLFAEGFLVTEIA 172 +G + +S +L ++ A GD L+P+E E+L+ ++G IA Sbjct: 475 HRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSIA 534 Query: 173 KKLNRSIKTISSQKKSAMMKLGVEN 197 S T+ + SA +KLGV N Sbjct: 535 SNFYLSDGTVRNYASSAYLKLGVRN 559 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 112/202 (55%), Gaps = 6/202 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP+ G+R L + V+ E ++ + L K+ +++TD++MP Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQ-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L++ IK S +++L+M++N + A + +G +LK +L +A+ + Sbjct: 60 -MDGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKV 118 Query: 124 QKGKK-FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 GK+ F+ + ++ L +++++G ++ +E VLRL + G IA++++ S++T+ Sbjct: 119 AAGKRYFSADVINTLSQELASGKQA--LVTQREQLVLRLISLGMNNKRIAQEMDVSVRTV 176 Query: 183 SSQKKSAMMKLGVENDIALLNY 204 + K++ KL +++ L+ Y Sbjct: 177 ETHKRNIKQKLMIDSTAGLVRY 198 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 4/195 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH +VL G+R LE+ + VV D +L+ + + V++ DL+MP Sbjct: 8 IRVVLADDHELVLEGLRGLLERESDMIVVATATDGESLLAIIERERPDVVVMDLAMP--- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++ ++ I+R + +++LT + L + ++ +G LK P + + Sbjct: 65 TRDGLSCLREIRRRGMPVKVVILTAFGDGGALQSAWEMQADGFALKTDPPRQTIATIRNV 124 Query: 124 QKGKKFTPESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+ P V + + A G RL+ +E +VLRL AEG +IA++L T+ Sbjct: 125 AHGQIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTV 184 Query: 183 SSQKKSAMMKLGVEN 197 ++ KLGV N Sbjct: 185 KYHLQNIFQKLGVTN 199 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 7/206 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+I DDH +V GIR+ LE + V+VV + E + + V++ D+ MPG Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPG-- 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG + + +K+ P++ +I +T + + + VL L G + K+ ++ A+ + Sbjct: 66 -IDGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKV 124 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 KG+K+ +++ + S D LS +E +V+ + G V +IA +L S K Sbjct: 125 AKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSK 184 Query: 181 TISSQKKSAMMKLGVENDIALLNYLS 206 TI+ + KLG++ND+ L YL+ Sbjct: 185 TINGYRYRMFEKLGIKNDVE-LTYLA 209 >UniRef50_Q07MS7 Two component transcriptional regulator, LuxR family n=4 Tax=Bradyrhizobiaceae RepID=Q07MS7_RHOP5 Length = 210 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 6/202 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M V+I DDHPI+ G R + ++ E D+ + V + D+++PG Sbjct: 1 MRVLIVDDHPIIASGCRALFAGDPEIEIL-EAHDAESGERGFVTERPDVCVLDINLPGVS 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G L + I P II+ +MN++PA + ++ +G V K G P DL A+ + Sbjct: 60 ---GFELARRILAREPGARIIMFSMNDDPAFAARAIEAGAKGYVSKAGDPCDLADAIREV 116 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK--RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G + + ++ + + G ++ +L+ +E E+LRL A G ++EIA ++ S KT Sbjct: 117 GEGGVYLAPATAKSIAFAAIGSPENRLAKLNAREIEILRLIAAGNSLSEIAWQVRASYKT 176 Query: 182 ISSQKKSAMMKLGVENDIALLN 203 I++ KLGV + L+ Sbjct: 177 IANTSSLMRQKLGVRSSAELMR 198 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 21/216 (9%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ ++I DDHP+VL G++ L E V VVG ++ I L + + D+++P Sbjct: 2 SVRILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDI 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L K +K FP + + L+ N A +S ++ G ++K D+ +A+A Sbjct: 62 S---GIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQ 118 Query: 123 LQKGKKF--------TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 +Q G F TP + + + L+ +E EVL L AEG +IA++ Sbjct: 119 VQAGGYFMNVQFDQVTPATAPKTV----------PFLTRREKEVLVLIAEGLTNPQIAEQ 168 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L S+ T++S +++ ++K V N +L+ + + L Sbjct: 169 LFISVTTVNSHRQNLLIKFEVSNTASLIKLAAGLGL 204 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 8/206 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V IADDH +V G + + VVGE D + + +++ HVL+ D+SMP + Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I FPS II+LTM L L G VLK + L A+ + Sbjct: 62 --NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKV 119 Query: 124 QKGKKFTPESVSRLLEKISAG--GYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + ++++ L G G +K LS +E E+ L A+G+ E A KL Sbjct: 120 ATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFI 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLN 203 S+KT+ + + KLGV + L++ Sbjct: 180 SVKTVETHRSKIYAKLGVNSRAELVH 205 >UniRef50_C6X5T9 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5T9_FLAB3 Length = 221 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 12/198 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL--PKLDAHVLITDLSM 59 N+NV+I DDH I++ G+ L + +N+V + D+ I++L K H+++ DL M Sbjct: 6 TNINVVIIDDHNIIIEGLEMLLSLRKEINIVQTYNDANDFISDLRNQKYIPHIVLMDLMM 65 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNN-NPAILSAVLDLDIEGIVLKQGAPTDLPK 118 P +G K +K+ FP + II+L+M+ + I V + +EG + K+ + +L Sbjct: 66 PT---INGYEAAKILKKEFPVVRIIILSMDCASKTIYDLVEKIGVEGYLSKKISAKELYF 122 Query: 119 ALAALQKGK-KFTPESVSRL---LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 AL + G F+ E+ L EKI + Y +LS +E ++++L GF TEIA Sbjct: 123 ALKQVDSGYVHFSDEAAKALDSFREKIIS--YPSIKLSEREKQIVKLMFAGFTNTEIAAA 180 Query: 175 LNRSIKTISSQKKSAMMK 192 L SI T+ + +K+ K Sbjct: 181 LFISISTVETHRKNIYRK 198 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 16/221 (7%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + ++I DDHP+ G++ L + V GE + + + D+S+P Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 D+ GI L + +++ PSL I++++M+ ++ L + G + K A +L L Sbjct: 61 -DR--SGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGL 117 Query: 121 AALQKGKKFTPES----VSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVT 169 A+ G+ + + +SR L E+ S Y L+P+E EV+RL EG Sbjct: 118 RAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDS--LTPREREVMRLVVEGLSNK 175 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 E+A L S+KT + S M KLG++N + L+ Y + + L Sbjct: 176 EVAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGL 216 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 7/200 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ V+IADDH +V G+RK LE + V+ E D IN K ++I D++MP Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + IKR PS+ II LT+ ++ V +LK A ++L + Sbjct: 61 G---TDGIVATRVIKRELPSVRIIALTVYEGEEVVDMV-KAGASAYILKDVAGSELVDTI 116 Query: 121 AALQKGK-KFTPESVSRLLEKI--SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G+ P +RL+ ++ S + RL+ +E +VL L +G E+A+ + Sbjct: 117 HRVMNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFI 176 Query: 178 SIKTISSQKKSAMMKLGVEN 197 S KT+ + S KLGV++ Sbjct: 177 SEKTVKNHLTSIFRKLGVKD 196 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 17/202 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DD P+V +R E + +NVVGE + + + +L +++ D++MP Sbjct: 9 IQLLLVDDDPLVRRSLRMLFE-LHDINVVGEASNGEEALKAIARLKPTMILMDVNMPK-- 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNN-NPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI +K IK ++P + +I+LT++N + ++ A+ D VLK P L + + + Sbjct: 66 -MDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRD-GCSAYVLKDSPPEQLIEVVES 123 Query: 123 LQKGKKFTPESVS-RLLEKISAGGYGDKRLSPK--------ESEVLRLFAEGFLVTEIAK 173 + +G+ F S++ LL + G +R PK E EVL+L G EIA Sbjct: 124 VAEGRYFVDTSIANELLVNLVQG--TPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAG 181 Query: 174 KLNRSIKTISSQKKSAMMKLGV 195 KLN +++T+ + S +MKL V Sbjct: 182 KLNITLRTVKAHVSSILMKLNV 203 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 6/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NV+IAD+HP+V GI++ LE + V+G+ +TAL L K VLI ++ +P Sbjct: 19 INVLIADNHPVVRLGIKQVLENDGDIQVLGDVGTTTALFQMLSKATPDVLILEMDIPEI- 77 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI ++ +K +P + +++ + + + + G + K + L A+ + Sbjct: 78 --NGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKV 135 Query: 124 QKGKKF-TPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G F T E RL E ++LS +E EVL++ A G E+A LN + K Sbjct: 136 SDGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEVALGLNLNEK 195 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+S+ K M KL V+N + LL ++ L Sbjct: 196 TVSTYKARLMKKLNVDNMVDLLQQAKALEL 225 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 8/206 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH I+ G++ L + E + VV E + ++ ++ V + D+ MP Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + I S ++ L+M + + +S +L + G +LK A T+L +A+ Sbjct: 60 -QMDGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRK 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+ + S+S ++ K+ D + L+P+E E+L L AEG E+A++L+ S Sbjct: 118 VMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 IKT+ + ++ M KL ++N L+ Y Sbjct: 178 IKTVGTHRQHIMNKLKLKNLADLVKY 203 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VII DDH +V G+ + L+ ++VVGE ++ ++ +++ DLS+PG Sbjct: 12 VRVIIVDDHTLVRAGLSRLLQTFAGIDVVGEASNAQQALDMTSLHRPDLVLMDLSLPGRS 71 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 D +T + R P +++++M+++P + LD G V+K AP +L AL A Sbjct: 72 GLDAMT---DVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELALRAA 128 Query: 124 QKGKKF-TPESVSRLLEKI--SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ F +P+ S+++ + G LSP++ E+LR G EIA L S+K Sbjct: 129 AAGQVFLSPQISSKMIAPMLGREKPVGIAALSPRQREILREIGRGQSNKEIAADLGISVK 188 Query: 181 TISSQKKSAMMKLGVE--NDIALL 202 T+ + + M LG ND+ LL Sbjct: 189 TVETHRARMMESLGCRRANDLVLL 212 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 15/210 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH IV GIR LE+ ++VV E ++ L HV++ D++MPG Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + P + +++L+M+ + +S G +LK A +L +A+ + Sbjct: 60 -LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQV 118 Query: 124 QKGKKFTPES---------VSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 G+ + V+RL E ++ + L+P+E EVL+L AEG A + Sbjct: 119 ACGEMYVCHGIIGVVVHDYVTRLPESLTQ---PEVPLTPREREVLQLIAEGNNAKNAAYQ 175 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNY 204 LN ++KT+ + ++ M KL + + L Y Sbjct: 176 LNINVKTVDTHRQQIMKKLKMRSVAELTKY 205 >UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GLU5_9BURK Length = 218 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 7/205 (3%) Query: 1 MNN--MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 MNN + +++ DDH +V G R LE V E E++ + K ++I D+S Sbjct: 1 MNNADLRILLVDDHAVVRAGYRHLLETQGGFKQVREAENAQEAYSTCQKELPGLIICDIS 60 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP G+ L++ + +P + ++ TM+N+ + A +D +G V K P L + Sbjct: 61 MPEPV---GLNLVQRVLGRWPEVKFLMFTMHNSIELARACMDAGAKGYVTKSSRPEVLLR 117 Query: 119 ALAALQKGKKFTPESVSRL--LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ + G+ F +SRL L ++ G LS +E EVL L G +I + L Sbjct: 118 AIGEVLAGRTFISADLSRLMALSRLRDNRGGLDELSSREFEVLCLLVAGQSAEQIGELLF 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIAL 201 S KTI + KL V NDI L Sbjct: 178 LSAKTIHNIHYQIKKKLQVSNDIEL 202 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 10/204 (4%) Query: 8 IADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA-HVLITDLSMPGDKYGD 66 I +DH IV G+++ L + + V+ EF +++NL K + +++ D+++PG D Sbjct: 6 IVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG---MD 62 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ L + IK+ +P II+LTM+ + D +G K ++L + + G Sbjct: 63 GLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYNG 122 Query: 127 KKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +K+ +SVS++L K S+G L+ +E EVL G EI KL S + Sbjct: 123 QKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCISTR 182 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + + + K G++N + L+ + Sbjct: 183 TVENHRANILRKFGLKNTVELVKF 206 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 6/201 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH ++ I L I + +V E++ + + + + V++ DL MPG Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ + R P + +I LT+ + + L +G V K +L +A+ ++ Sbjct: 60 -MGGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+++ V+R + S G G+ L+P+E EVL G T IAK L S K Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178 Query: 181 TISSQKKSAMMKLGVENDIAL 201 T+S+ + +LGV ND L Sbjct: 179 TVSTYRSRIFERLGVRNDAQL 199 >UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14 Tax=Lactobacillus RepID=A5VJY7_LACRD Length = 217 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL--PKLDAHVLITDLSMPGDK 63 V++AD++PI+ ++ +EQ++ V+ E ++T + +L + D ++I DL+MP + Sbjct: 4 VLVADNYPIIRMAVKNLVEQLDNFKVIAE--EATGIDASLRAEQGDIDIIIMDLAMPPGE 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ IK I HFP+ II+ + N P ++ + +LK +P +L AL Sbjct: 62 --NGLITIKRIHEHFPNTKIIIFSSRNEPQYINQAIYNGANSYILKSSSPKELVHALRHA 119 Query: 124 QKGKKFTPESV---SRLLEKISAGG----YGDK-RLSPKESEVLRLFAEGFLVTEIAKKL 175 G+K+ ++ + L I G G+ LS +E E+L L G+ EIA K+ Sbjct: 120 INGEKYLDNNIMVTKKDLLVIKGGSPHFDLGNYVALSKREQEILPLIVLGYTNKEIATKM 179 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 S KT+ + K M KL + + LL+Y Sbjct: 180 FISPKTVEAHKTKIMQKLNLASHAELLHY 208 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 5/211 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L + VVGE + + +L V++ DL MP Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMP--- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++ I++ P + ++ LT + + A++ + G +LK DL A+ A Sbjct: 60 VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAA 119 Query: 124 QKGK-KFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+ +P ++SRL+ ++ G ++L+ +E+EVL + A G EIA+ L +T+ Sbjct: 120 AAGQIHVSPAAISRLMGQVREPS-GPEQLTERETEVLTMLARGKANKEIARDLRIGQQTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + + KLGV + Y L PA Sbjct: 179 KTYVSHILTKLGVHSRTQAAVYAVQSGLVPA 209 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ +DH ++ G+R LEQI+ + +VGE + + + V+I D +P Sbjct: 25 ISVLLIEDHVLIRRGMRLMLEQIKGIRIVGEASTGEEGLALRREKEPGVVILDFQLPDT- 83 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ L + + R P + I+V+T + +L++ + G + K +L +A+ A+ Sbjct: 84 --NGLELARRLLRRDPEIKILVVTAMEGELLPMRLLEVGVRGFITKSSDSAELERAIRAV 141 Query: 124 QKGKKFTPESV-SRL-LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G+++ ++ SRL L K +A +LS ++ EVL L A+G IAK+L+ + KT Sbjct: 142 HSGQRYIGSAIASRLALSKTTAAKSPFDQLSNRQMEVLLLLAKGMNAESIAKQLHITAKT 201 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 ++S + KLGV+ND+ L+ L DK Sbjct: 202 VNSHRYRMFEKLGVKNDVELIKLAVQYGLIDIDK 235 >UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP13_9BACT Length = 211 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 107/197 (54%), Gaps = 8/197 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 M V++ +D I+ + +S+ + ++ ++VVG+++D + L ++I DL + Sbjct: 1 MKVVLIEDQ-ILFRELTESIVRTDFGLDVVGQYDDGEEGLQACLDLQPDLVILDLKIK-- 57 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 K G G+T+ IK P +I+++ + P I+ ++ + G+V K + L A+ Sbjct: 58 KLG-GLTVFNRIKDRTPECKVILVSAHFTPEIVKNTVERGVNGLVTKNSSIESLKDAIGQ 116 Query: 123 LQKGK-KFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + KG ++PE+ L + I+ Y D K L+P+E++VL++ EG+ EIA+ N S+ Sbjct: 117 ILKGAVYYSPEAYKLLRQPITNKDYNDSLKMLTPRETDVLQMVGEGYSSKEIARSFNLSV 176 Query: 180 KTISSQKKSAMMKLGVE 196 +TI + + + M KL + Sbjct: 177 RTIDAHRSNIMRKLNLR 193 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 12/213 (5%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN IIADDH IV G++ + + V++V E + L++ + A +LI DL M Sbjct: 1 MNRPFTAIIADDHAIVREGLKLLISAMTNVSIVAEAANGDTLLDLVRSTRADLLILDLGM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG GI I I+ P + I+VLT N P + A LD G + K G P +L A Sbjct: 61 PGVA---GIQFISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTA 117 Query: 120 LAALQKGKKFTPESVSRLL---EKISAGGYGDKRLSP-----KESEVLRLFAEGFLVTEI 171 + A++ GK + +S+ + E++ + +SP +E +VL L A+G ++ Sbjct: 118 IDAVKSGKTYLAKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVLLLSAQGQTSRQM 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 A++L S T +++ M KL + + + Y Sbjct: 178 AERLGISPLTARKHRENLMRKLNLHSTAEVTAY 210 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 107/213 (50%), Gaps = 22/213 (10%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + ++IADDH + G+R L V+G+ D +I + +L +++ D+++P Sbjct: 7 STTILIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLILLDINLP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 + +G+ + + ++R FP + ++++TM + + + + + G +LK +P L L Sbjct: 66 --HRNGVDIARQLRREFPHVGVVIITMYSYQKLTEELRAVGVAGYLLKSASPDRLMTCLT 123 Query: 122 ALQKGKKF----------TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 ++ GK F P +++ S L+P+E E++RL G ++I Sbjct: 124 SVVSGKPFFDQLPNELAIDPRETDPFVKQFS--------LTPREIEIIRLIRNGLSTSQI 175 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 A++L S +TI + +K+ KLG+ + AL+ + Sbjct: 176 AERLFLSAETIKTHRKNIYFKLGINSVAALILF 208 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 5/190 (2%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V I +DH G+R ++ + + VVGE + I L A V++ D+ +PG Sbjct: 3 RVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGM-- 60 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DGI K +K F + ++VLT++ A + A + + LK P L A+ A Sbjct: 61 -DGIEATKLVKERF-GVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAA 118 Query: 125 KGKKFT-PESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + P+ +L ++S G +LSP+E EVLRL AEG EIA++L S+ T+ Sbjct: 119 IGSTYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVK 178 Query: 184 SQKKSAMMKL 193 + + + KL Sbjct: 179 THIEELLAKL 188 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 5/204 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ V++ DDH +V G+R LE + + V GE E T + ++ V++ D +P Sbjct: 4 NIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPD- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GDGI +KR FP + II+LT + +++ + +G +LK +L + A Sbjct: 63 --GDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQA 120 Query: 123 LQKGKKFTPESVSRLL-EKI-SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + KG+ SV+ +L + I S + L+PKE ++L + + G EIA+ + S K Sbjct: 121 VHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISDK 180 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+ + + + KL V N +Y Sbjct: 181 TVRNYVSNILQKLNVSNRTEAASY 204 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 9/199 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+I DDHP+ G+R LE + V VVGE E + +L V++ DL MPG Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPG-- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+GI + I R P + ++VLTM + + A + G +LK+ ++ +A+ A+ Sbjct: 67 -GNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAV 125 Query: 124 QKGKK-FTPESVSRLLEKIS----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ + PE R+L + L+ +E EVL+L A+G EIA+ L S Sbjct: 126 AAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLS 185 Query: 179 IKTISSQKKSAMMKLGVEN 197 KT+ + + MKL V + Sbjct: 186 PKTVRNHVSNIFMKLHVAD 204 >UniRef50_C7PJC5 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteroidetes RepID=C7PJC5_CHIPD Length = 208 Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 6/199 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + I DDHPIV G++ L E V G + K + +L+ D+++P Sbjct: 2 VRIFITDDHPIVREGLKNVLNATEGFAVTGTCSTGKETLEAFEKKEPDILLLDINLPDI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ L +K+ P + +I L+++N I++++L G + K + +A+ + Sbjct: 61 --NGVELCAAVKKKHPDVYVIALSVHNEAPIINSILRQGASGYIQKNALSEIIVEAIQDV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK--RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 KG + E +L + G + +++ +E E+L+L AEG + +IA+KL S T Sbjct: 119 LKGGSYVCEQSREILRRQRGKGGLTQLPKMTRREKEILKLAAEGLTIAQIAEKLFISPYT 178 Query: 182 ISSQKKSAMMKLGVENDIA 200 + S +K+ M K V N +A Sbjct: 179 VESHRKNLMDKFEV-NSVA 196 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 6/201 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDH +V G R+ LE + VVGE ED + +L V++ D +MP Sbjct: 6 ISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSM- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G ++I R P +I++L+M+ + + L+ + G +LK ++ A+ + Sbjct: 65 --NGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQV 122 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK+ + L A G L+ +E EVL+L G EIA L+ S T++ Sbjct: 123 AAGKQVLDRRLGALDLPSGAAPAG---LTTRELEVLQLIVHGKSNKEIAAVLSLSANTVA 179 Query: 184 SQKKSAMMKLGVENDIALLNY 204 + + M LG+ N L+ Y Sbjct: 180 VHRANIMQTLGIHNTAELVVY 200 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH +V G R+ LEQ V E + + + V++ D+S+PG Sbjct: 10 LTLLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGI- 68 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + ++R P + +++ +M+ P L G + K AP L +A+ + Sbjct: 69 --SGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRI 126 Query: 124 QKGKKF-TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G + P+ R + +AG + LS +E E+ RL AEG EIA+ LN S KT+ Sbjct: 127 AAGGHYLGPDVRCRHGDADTAG---LQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTV 183 Query: 183 SSQKKSAMMKLGVENDIALLNYLS 206 ++ KL + N++A + L+ Sbjct: 184 ANYGSGIREKLAL-NNVAEMTRLA 206 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 9/199 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + + DD IV I LE E + +VG F + +LP+ V++ D+ +P Sbjct: 2 IRIALVDDEAIVRDTIAFLLETTENLTLVGSFASAREAQQSLPQCAPDVILVDIGLPD-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTM-NNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+TLI+ ++ P +VLT+ ++N IL A+ G +LK+ P L A+ Sbjct: 60 -ASGLTLIRALRPQLPHAEFLVLTVFDDNQHILEAI-QAGASGYLLKRDLPEHLISAIRI 117 Query: 123 LQKGKKFTPESVSR----LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +G + V+R L A ++L+P+E EVL L A G EIA++L S Sbjct: 118 VHQGGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLS 177 Query: 179 IKTISSQKKSAMMKLGVEN 197 I+T+ + + KL N Sbjct: 178 IETVRTHIRHIYRKLQARN 196 >UniRef50_A6EP24 Two-component response regulator n=1 Tax=unidentified eubacterium SCB49 RepID=A6EP24_9BACT Length = 214 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 12/207 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVV-----GEFEDSTALINNLPKLDAHVLITDLSM 59 N+IIADDH + L G+ L+ N++ G +N K+D ++ITD++M Sbjct: 4 NLIIADDHKMFLDGLLSILKTESNYNILFTAKHGGHVQKYISVNTNEKID--LVITDVTM 61 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P DGI L K+IK+ ++ +V++M+N+P I+ +++ +++G + K + KA Sbjct: 62 PE---VDGIALNKWIKKTDLNIKTLVVSMHNSPKIIDDLIESNVDGYLQKNAQKEEFLKA 118 Query: 120 LAALQKGKKFTPESVS--RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + + G+K+ + + L K + +L+ +E EV+ L AE F EIA +L Sbjct: 119 IETILGGEKYFSKEIKDIYLKNKFEKNKEKEIKLTKREVEVISLIAEEFTTQEIADQLFL 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNY 204 S TI S +K+ + KL V N L Y Sbjct: 179 SKHTIESYRKNLITKLNVRNLAGLTKY 205 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 12/213 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ V++ DDH + G+R + V++VGE D + + + + V++ D+ +P Sbjct: 1 MSQRRVVVVDDHDMFRAGVRSEIGA--SVDIVGEGADVDSAVKAIVAAEPDVVLLDVHLP 58 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G G ++K + + P + + L++++ + V+ G V K + T+L A+ Sbjct: 59 G---GGGTEVMKQVHQRHPEVKFLALSVSDAAEDVIGVIRAGARGYVTKNISGTELVDAI 115 Query: 121 AALQKGKK-FTPESVSRLLEKISAG---GYGDK---RLSPKESEVLRLFAEGFLVTEIAK 173 + G F+P +L+ S D+ RLS +E EVLRL A G+ E+A+ Sbjct: 116 GRVADGDAVFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEVAR 175 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLS 206 +L S+KT+ + S + KL + N L + + Sbjct: 176 ELFISVKTVETHVSSVLRKLQLSNRHELTRWAT 208 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 8/217 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R LE E + V GE D +L+ V++ DL MPG Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGV- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ ++ + ++V+T + ++ + G V K P L A+ ++ Sbjct: 67 --DGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 124 QKGKK-FTPESVSRLLEKISAG----GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G PE + LL+ S G G L+ +E EVL L A+G EIA+ L + Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+ + + +MKLGV + + ++P D+ Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHGIAPEDQ 221 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 + IADDH ++ G+ L VVGE D+ + L VL+ D+ + G Sbjct: 7 RIAIADDHGLMRQGLAAILAADPRFEVVGEAADAAGAVGLARDLAPDVLLLDVGLAG--- 63 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G G+ + + P ++++TM+ +++A G V+K A T L A+ A+ Sbjct: 64 GSGVDVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIEAVL 123 Query: 125 KGKKF-----TPESVSRLLEKISAGGYGDKRLSPK----------ESEVLRLFAEGFLVT 169 +G+++ TP+ + RL E Y ++ P+ E ++LRL AEG V Sbjct: 124 RGERYLDAAITPQVLLRLDE------YAARKTGPRDPAYDSLTRREQQILRLLAEGRSVA 177 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 IA +L S KT+ + + + KLG+ N L+ Y + + + D D Sbjct: 178 AIATELFISKKTVENHRANICGKLGLANLAELVRYAARLGIVDLDDD 224 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 112/206 (54%), Gaps = 8/206 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ DDH +V GIR LE I V V+ E D ++ L +LI D+S+PG Sbjct: 5 ITIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPTLLILDISLPG-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + + + + I++L+M+++ ++ L + G ++K+ A +L A++ L Sbjct: 63 -LNGLEVARSVTKMKTKTKILMLSMHSDVEYVAKALTIGSHGYLMKESAVEELETAISTL 121 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 K++ +++ +++K+ + K L+ ++ ++L+L AEG+ EIA++++ S Sbjct: 122 INDKQYIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMSVS 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 IKT+ + + M +L + + L+ + Sbjct: 182 IKTVETHRAHIMSRLNIFDIAGLVRF 207 >UniRef50_C6CGT1 Two component transcriptional regulator, LuxR family n=21 Tax=Proteobacteria RepID=C6CGT1_DICZE Length = 213 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 6/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDH I+ G+++ E + VV E + +++ L + +L+ D+SMPG Sbjct: 5 IKLMIADDHVIMREGLKQIFALDENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSMPGIC 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G LI I +P L I+VL+M + P I VL G + K P L A+ + Sbjct: 65 ---GEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRRV 121 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G ++ S++ + GD R L+ +E +++ + A+G V IA+ L S K Sbjct: 122 AQGARYIDHSIAEQIVFADCQTRGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAISNK 181 Query: 181 TISSQKKSAMMKLGVENDIALLNY 204 T+S+ K M K+ + ++ Y Sbjct: 182 TVSTHKSRLMEKMQFTTNADIVKY 205 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 16/217 (7%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++I DDHP+ G+R L+ + VVGE + L + + D+S+P Sbjct: 6 RILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPD--- 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G GI L + I+ P L +++++M+ ++A G + K+ + +A+ + Sbjct: 63 GSGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVL 122 Query: 125 KGKKFTPESVS----RLLEKISA-------GGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 G ++ S+S R L IS YG LS +E +V+RL AEG EIA Sbjct: 123 SGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGS--LSLREQQVMRLLAEGLTPEEIAA 180 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KL S KT+ + + + M KLG+++ +A + + + + L Sbjct: 181 KLFVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGL 217 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 8/209 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ DDH + G+R L++ + + VVGE + LP +A V+ D +MP Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G + P L +I L+M + S ++ +G ++K ++ +A+ Sbjct: 61 G---MNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAI 117 Query: 121 AALQKGKKFTPESVSRLLE---KISAGGY--GDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G + E V R L + + GY D+RLS +E E+L G EIA +L Sbjct: 118 ETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADEL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 S +T+ + + + K G +N +L+ Y Sbjct: 178 FISKRTVDKHRANILEKTGCKNTASLVVY 206 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 9/205 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAH----VLITDLSMP 60 V++ DDH +V G+R L + VVGE + A + L + A ++ITD+ M Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI L + +P ++++V++M++N + G VLK +L A+ Sbjct: 80 GMG---GIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAI 136 Query: 121 AALQKGKKFTPESVSR-LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 A+ G+ F ++R + E++ A G D L+ +E ++L G EIA +L S+ Sbjct: 137 EAVLAGRVFYSARIARGMAEQMPATGPLDA-LTRRERDILGCIGRGMANKEIATQLGVSV 195 Query: 180 KTISSQKKSAMMKLGVENDIALLNY 204 +T+ + + + KLG+E L+ Y Sbjct: 196 RTVETHRLNLKRKLGIEGRAGLVKY 220 >UniRef50_Q26C67 Transcriptional regulator, LuxR family n=2 Tax=Flavobacteria bacterium BBFL7 RepID=Q26C67_9BACT Length = 209 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 + I +DH + G++ LEQ + V+G + ++ L + V++TD++MP Sbjct: 4 ITITEDHISLSDGLKVFLEQDSNIEVIGNAPNGKEMLEMLKYVKPQVVLTDINMP---IM 60 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 +G+ L K IK PS+ +I L+M +NP + ++D +G +LK T+L KA+ + Sbjct: 61 NGVELCKAIKAKHPSIKVIALSMYDNPGAIKEMIDAGADGYILKISPLTELKKAIENVAT 120 Query: 126 GKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + ++ ++++ D + LS E+E+L+L A G EIA++ ++ T+ Sbjct: 121 GTSYFDAAID--IKEVHKKDDIDNVQPLSRSETEILKLIALGKTSAEIAEERQTAVSTVV 178 Query: 184 SQKKSAMMKLGVENDIALLNY 204 +K+ + KL +E L Y Sbjct: 179 KHRKNMIHKLQLEGKNELYKY 199 >UniRef50_A7V9C7 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V9C7_BACUN Length = 210 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 8/201 (3%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLP-KLDAHVLITDLSMPGDKY 64 +++ DDHPIV GI Q+E V G + L K + I DL +P Sbjct: 10 ILVIDDHPIVAEGIIALASQLEGVTCKG--ATCAKDVEQLTLKERFDLCIIDLELPD--- 64 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +G LI ++ P I++ TM+ P I++ + L+I G V K + ++L A++ L+ Sbjct: 65 MNGFQLISHLHSQIPECGILIYTMHEEPWIIAKLSTLNINGAVSKNASTSELRDAISTLK 124 Query: 125 KGKKFTPESVSRL-LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G ++ S L EK + + LS +E EVL ++G +EI++ L SI TI Sbjct: 125 NGTRYFSNVFSELDKEKQNTLPHALPELSRREKEVLAYLSQGLSTSEISQLLFLSINTIQ 184 Query: 184 SQKKSAMMKLGVENDIALLNY 204 + +K M KL +N +A L Y Sbjct: 185 TYRKRLMEKLEAKN-VAELVY 204 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 6/206 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH + G+++ L ++ E + I+ L K ++ D++M Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSD 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI +K IK +P I++L+M L G + K P +L KA+ Sbjct: 63 I---NGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVD 119 Query: 122 ALQKGKKFTPESVS-RLLEKI--SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KG K+ P + S +LL I S ++LS +E +V + A+G + EI+K+L+ S Sbjct: 120 KIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSIS 179 Query: 179 IKTISSQKKSAMMKLGVENDIALLNY 204 IKT+S+ + + KLG+EN+ ++NY Sbjct: 180 IKTVSTYRARILEKLGLENNAEIINY 205 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 11/208 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ DDH +V G+R L Q + + VV E E++ I+ + + + V + D+ +PG Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ L+K IK P +++++L+M L G + K P L LA Sbjct: 64 K---GGLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTL---LA 117 Query: 122 ALQK----GKKFTPESVSRLLEKISAG-GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A++K G+ +P + +L ++ G LS +E EVLR A G +T+IA+ L+ Sbjct: 118 AIRKVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALH 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNY 204 S KT+++ + + K G+ ++ L Y Sbjct: 178 LSPKTVTTYRARIVEKTGLHSNAELTRY 205 >UniRef50_C7PUZ6 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PUZ6_CHIPD Length = 219 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 12/211 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 +NN+ V IADDH I G+ +L E + VV E ED L+ + + V++ DL MP Sbjct: 2 VNNIKVAIADDHKIFRSGVINTLTPYENITVVFEAEDGAHLLEIMEEQQPDVILMDLKMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI K ++ + ++ +IVLTM + + +++ +LK P ++ +A+ Sbjct: 62 N---MDGIEATKKVREKYANVKVIVLTMYEDDNFIVHLIENGANAYLLKNAEPNEIYEAI 118 Query: 121 A-ALQKGKKFTPESVSRLLEKISAGG--------YGDKRLSPKESEVLRLFAEGFLVTEI 171 +KG F LL+K+ + +L+ +E EVLRL EI Sbjct: 119 CTTYEKGFYFNENVNLALLKKVMHKNKQHFKPTFRNEVQLTDRELEVLRLICNEHTTQEI 178 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 +K++ S +T+ ++ + K G +N + L+ Sbjct: 179 SKEIFLSPRTVEGLRQKLLEKTGAKNIVGLV 209 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 6/200 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 V+I DDHP++ G+R+ LE VV E D + I+ +LD V++ DL+M G Sbjct: 7 FQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKG-- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + ++R + II+LT+++ + + A++D +G +LK P L +A+ A Sbjct: 65 -MSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAG 123 Query: 124 QKGKKFTPESVSRLL-EKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 KG K E V++ L E+ G D L+ +E +VL A+G +IA LN S + Sbjct: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 Query: 181 TISSQKKSAMMKLGVENDIA 200 T+ ++ + KL V + +A Sbjct: 184 TVKVHIRNLLRKLNVRSRVA 203 >UniRef50_C7LUF3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF3_DESBD Length = 203 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 15/206 (7%) Query: 4 MNVIIADDHPIVLFG----IRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M ++I DDH +V G I + E+ + G ++ ++ + + D ++I D+S+ Sbjct: 1 MRILIVDDHAVVRRGTMNIIIDRFPECEF-SEAGTLHEARLVLED-ARFD--LVILDISL 56 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P G G+ ++Y + H P L +I+L+M++ L L G + K AP +L +A Sbjct: 57 PD---GSGLDFLEYAQEHSPGLPVIMLSMHHEIEYAQRCLSLGARGYLSKNSAPEELEEA 113 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + ++ G + S LL+ + D LS +E +V R A+G +T IA+ + S+ Sbjct: 114 MISILDGGIYVNPS---LLDSRRSTSAMDT-LSRQERDVARRLAKGETMTAIAQAMGVSV 169 Query: 180 KTISSQKKSAMMKLGVENDIALLNYL 205 KT S+ + AM KLG+ L+ YL Sbjct: 170 KTASTYRTRAMRKLGIATTSGLIRYL 195 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 114/213 (53%), Gaps = 12/213 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + + +ADDH +++ G+ L+ + +VG + + +++ + A +L+ D+SMP Sbjct: 1 MTKIKIHLADDHQVLIDGLTNLLQTVSNFEIVGSSLNGVTVYDDVIQDQADILVLDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI ++K + +I+L+ ++ I+ V+ L +G + K+ A ++ +A+ Sbjct: 61 QK---DGIEVLKEFNQKGLPCKVIILSSYDDLKIIKEVMKLGAKGYLTKKCAGENMIEAI 117 Query: 121 AALQKGKKFTPESVSRLL--------EKISAGGYGDKR-LSPKESEVLRLFAEGFLVTEI 171 A+ +G+++ ++V + K++ Y + LSP+E E++ L + EI Sbjct: 118 EAVYEGQEYFSDAVREKIFSMFSQNNPKLNKNVYIENPILSPREIEIVTLICLEYSGKEI 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNY 204 ++KL S+ T+ + +K+ M KL ++N I L+ Y Sbjct: 178 SEKLFISVNTVETHRKNIMKKLNIKNTIGLVKY 210 >UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS Length = 212 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 5/205 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++ DDH I++ GI +L +V ++ + N + +LI DLS+P Sbjct: 1 MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEPDILILDLSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ +I + + + +++I+V T + L G VLK + L AL Sbjct: 61 GI---NGLDIIPQLHQRWSAMNILVYTAYQQEYMTIKTLAAGANGYVLKSSSQQVLLAAL 117 Query: 121 AALQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + K++ +++R +L +++A + L+ +E +VL+L EG+ I++KL+ S Sbjct: 118 QTVAVNKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKLIDEGYTNHGISEKLHIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLN 203 IKT+ + + + M KL V LLN Sbjct: 178 IKTVETHRMNMMRKLQVHKVTELLN 202 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH ++ G+ L E +VV E D + K + + DLSMP Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMP--- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + G+ ++ +K P++ +++LTM++ + L G + K +L +AL + Sbjct: 65 HMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTV 124 Query: 124 QKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 G ++ E + LL E+ +A LS +E EVL L G+ ++ IA KL Sbjct: 125 AAGGRYLGEREAELLIDGALEEPEEPAA-------LSTREREVLELIVHGYSLSTIADKL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNY 204 SIKT+S+ K + KL + L++Y Sbjct: 178 YLSIKTVSTYKTRLLQKLDCTQNSELVDY 206 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++I DD P V +R L++ E +NVVG ED I+ +L HV++ DL M + Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDM---Q 439 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + DG+ K IK+ +P + +++ T + L +G +LK +L + + Sbjct: 440 HMDGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLI 499 Query: 124 QKGKKFTPESVS-RLLEKI---------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 KG + +S ++ EK A Y L+ +E E+L+L A+G T IA Sbjct: 500 HKGGTLIDQGMSHKIFEKFDEQIETPQSKATAY---ELTAREIEILQLVAKGLRYTTIAS 556 Query: 174 KLNRSIKTISSQKKSAMMKLGVEN 197 +L S T+ + +A KLGV N Sbjct: 557 RLYLSNGTVRNYASTAYTKLGVRN 580 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ G+ + L Q + + VVGE D ++ + + V++ D+ MP Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ K IK++ PS I++LT ++ + +L+ G +LK ++ A+ Sbjct: 61 ---RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAI 117 Query: 121 AALQKGKKFTPESVSR-LLEK---ISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAK 173 A++ G+ +R LLE+ +S DK +LSP+E E+L+L ++G EIA Sbjct: 118 RAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIAD 177 Query: 174 KLNRSIKTISSQ 185 KL S++T+ + Sbjct: 178 KLTLSMRTVKAH 189 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 280 3e-74 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 277 2e-73 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 259 6e-68 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 257 3e-67 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 255 5e-67 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 255 7e-67 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 255 1e-66 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 252 5e-66 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 252 7e-66 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 252 9e-66 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 251 1e-65 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 250 2e-65 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 249 6e-65 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 248 7e-65 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 248 7e-65 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 247 2e-64 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 247 2e-64 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 246 3e-64 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 246 3e-64 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 246 4e-64 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 246 4e-64 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 245 7e-64 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 245 8e-64 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 245 8e-64 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 244 1e-63 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 244 2e-63 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 244 2e-63 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 244 2e-63 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 243 2e-63 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 243 3e-63 UniRef50_Q04VJ6 Receiver component of a two-component response r... 243 3e-63 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 243 4e-63 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 242 4e-63 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 242 5e-63 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 242 5e-63 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 242 6e-63 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 242 7e-63 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 242 7e-63 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 242 8e-63 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 242 8e-63 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 242 1e-62 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 241 1e-62 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 241 1e-62 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 241 2e-62 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 240 3e-62 UniRef50_B3RA82 Response regulator protein; Response regulator r... 240 3e-62 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 240 3e-62 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 239 4e-62 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 239 5e-62 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 239 5e-62 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 239 6e-62 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 238 6e-62 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 238 8e-62 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 238 8e-62 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 238 8e-62 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 238 9e-62 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 238 9e-62 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 238 1e-61 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 238 1e-61 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 238 1e-61 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 237 2e-61 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 237 3e-61 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 237 3e-61 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 237 3e-61 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 236 3e-61 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 236 4e-61 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 236 5e-61 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 236 5e-61 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 235 6e-61 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 235 6e-61 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 235 7e-61 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 235 9e-61 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 235 1e-60 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 234 1e-60 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 234 1e-60 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 234 1e-60 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 234 1e-60 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 234 2e-60 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 234 2e-60 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 234 2e-60 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 233 2e-60 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 233 2e-60 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa... 233 3e-60 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 233 3e-60 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 233 3e-60 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 233 4e-60 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 233 4e-60 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 232 5e-60 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 232 6e-60 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 232 6e-60 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 232 7e-60 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 232 7e-60 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 232 7e-60 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 232 8e-60 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 232 8e-60 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 232 8e-60 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 232 9e-60 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 232 1e-59 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 231 1e-59 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 231 1e-59 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 231 1e-59 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 231 2e-59 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 230 2e-59 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 230 2e-59 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 230 3e-59 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 230 3e-59 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 230 3e-59 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 230 4e-59 UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavoba... 229 4e-59 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 229 4e-59 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 229 5e-59 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 229 5e-59 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 229 5e-59 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 229 6e-59 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 229 6e-59 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 229 6e-59 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 229 6e-59 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 228 7e-59 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 228 7e-59 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 228 7e-59 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 228 8e-59 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 228 8e-59 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 228 9e-59 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 228 1e-58 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 228 1e-58 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 227 1e-58 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 227 2e-58 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 227 2e-58 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 227 2e-58 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 227 3e-58 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 226 3e-58 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 226 3e-58 UniRef50_C7PEC4 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 226 4e-58 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 226 4e-58 UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12... 226 4e-58 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnoba... 226 5e-58 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 225 6e-58 UniRef50_B4CVL8 Two component transcriptional regulator, LuxR fa... 225 6e-58 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 225 7e-58 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 225 8e-58 UniRef50_B1Y741 Two component transcriptional regulator, LuxR fa... 225 9e-58 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 225 1e-57 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 225 1e-57 Sequences not found previously or not previously below threshold: UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 246 5e-64 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 245 1e-63 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 240 2e-62 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 238 1e-61 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 237 2e-61 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 236 4e-61 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 235 9e-61 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 234 2e-60 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 234 2e-60 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 232 7e-60 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 230 3e-59 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 230 3e-59 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 229 4e-59 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 229 5e-59 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 229 5e-59 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 228 1e-58 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 227 2e-58 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 227 2e-58 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 227 3e-58 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 226 5e-58 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 226 5e-58 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 225 6e-58 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 225 7e-58 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 225 7e-58 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 225 8e-58 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP Sbjct: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL Sbjct: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK Sbjct: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD Sbjct: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 11/220 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++A+DH IV G+ L + VVGE E+ I + +L V++ D+SMP Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + +K+ +P + I++L+M++ + L G ++K+ APTDL KA+ Sbjct: 61 ---ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAI 117 Query: 121 AALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A G F S+S+ + + +S G LS +E EVL+L AEG EIA Sbjct: 118 HAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L S KT+ + + KLG+ L Y L Sbjct: 178 GHLYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVE 217 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 7/215 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN M V IADDHP+V G+++ L +V GE +I+ + V + D MP Sbjct: 1 MN-MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMP 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI LIK +++ FP ++VL++ VL G + K+ AP DL A+ Sbjct: 60 GKG---GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAI 116 Query: 121 AALQKGKKFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +G +F ++ L RLS +E +++ L A G V EIA++L Sbjct: 117 RKVARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFL 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S TIS+ +K + KL ++++ L+ Y L Sbjct: 177 SPNTISTYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 8/220 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH + G+R+ +E + VVGE + + + +L V++ D++MPG Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPG 85 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI + I + + + +++LTM ++ + + ++K P +L +A+ Sbjct: 86 ---MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIH 142 Query: 122 ALQKGKKFTPESVSRLLEK-----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G ++ +L + ++ + LS +E +LRL A+G+ +IA LN Sbjct: 143 VAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALN 202 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 + T+ + + KLGV + + Y S L P D Sbjct: 203 LAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRPTD 242 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VIIADDH +V G+R LE+ VVGE T + + +L HV++ DLSMPG Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LI+ ++ P+L I+VLTM+ + G + K+ A T+L +AL + Sbjct: 61 --NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKV 118 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G + +++ L + LS +E EV R +G +T+IA L S KT Sbjct: 119 AAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +S+ K M KL + +D AL+ Y L Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 10/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ +DH IV G++ L E + VVGE D A + +L V++ D++MP Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ + I+ + +++L+M + + + G +LK +DL A+ Sbjct: 62 --KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAG-------GYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G F +V+++L + S G L+ +E EVL L EG EIAK Sbjct: 120 EVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKI 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L S+KTI + M KLGV N L+ + L A+ Sbjct: 180 LGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 9/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + ++IADDH +V GIRK LE + VVGE I + V+I D++MPG Sbjct: 5 EKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI K I++ +P ++I+ LT++++ + +L + G VLK + +L +A+ Sbjct: 65 ---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVY 121 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +G + V++ + +K L+ +E E+L + G EIA++L Sbjct: 122 QVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIAREL 181 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + K+GV + Y L+ A + Sbjct: 182 FISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGLNDAKLE 222 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 17/229 (7%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +N++I DDHP+ GIR SLEQ +VGE D + + +L V++ DLS+P Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ + + +KR P +I+LTM+ + L + K P L + Sbjct: 61 G---MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVI 117 Query: 121 AALQKGKKFTPESV-------SRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGF 166 + +G+ E V SR+L++ D+ L+P+E E+L A G+ Sbjct: 118 TRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGY 177 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 EIA+ LN S +T+ + S + KL V + + Y + Sbjct: 178 SNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLED 226 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 9/218 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH +V GIR LE++ V +VGE D + + + I D++MPG Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPG- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G I R P +++L+M+ + L G +LK A +L AL A Sbjct: 63 --LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNA 120 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++KG+ + S+S+ + ++ K L+P+ E+++L AEG EIA LN Sbjct: 121 VRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLN 180 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S+KTI + + M +LG+ + ++ Y L AD Sbjct: 181 LSVKTIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 10/216 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDH +V G+R LE V+G+ D ++ + V++ D++MP Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +GI + I P +I+ L+M+++ + + L +LK A DL A+ Sbjct: 61 G---LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGFLVTEIAK 173 A+ +GK F ++S++L + +++ L+ +E EVL+L AEG E+A Sbjct: 118 IAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAA 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 LN S+ T+ + + + + KL + + L+ Y Sbjct: 178 ILNLSLYTVETHRGNILQKLNLHSGAELILYAIRKG 213 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 11/215 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++ DDH + G+R L + V GE ++ + +L V++ D+ M Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G + I++ P + +I L+M ++ L+ +D+ G +LK L A+ Sbjct: 61 G---MSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAI 117 Query: 121 AALQKGKKFTPE-SVSRLLEKISAGGYG-------DKRLSPKESEVLRLFAEGFLVTEIA 172 +Q+G + +SRL++ G G L+ +E E+L++ AEG V EIA Sbjct: 118 REVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 S+KT+ + K + M KL + N L+ Y Sbjct: 178 AFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 10/219 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V +ADDHPIVL GIR L + +VGE + + + D V + D+SMPG Sbjct: 3 DRIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ L + + P ++VLT++ + A + +L G +LK+ A DL +A+ Sbjct: 63 ---LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G + SV+ A + LSP+E++VLRL A+GF EIA++ Sbjct: 120 AVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARR 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + S+K+I + K A KLG+ ++ Y ++ A Sbjct: 180 FDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWLDA 218 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 12/217 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V G L E + VV D + + VLI DLSMP + Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I FP I++LTM ++ L VL +G +LK L A+ + Sbjct: 61 --SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTV 118 Query: 124 QKGKKFTPESVSRLL----------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 +G+ + ++ L +++S+ K LS +E E+L L A+G+ +IA+ Sbjct: 119 YQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAE 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KL S+KT+ + K M KL +++ L+ Y L Sbjct: 179 KLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKL 215 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 13/220 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-----LDAHVLITDL 57 +++ADDH +V G+R L+ + VVGE D I + + + + + D+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 +MP G+ + + R +P L I++LTM++N L L G VLK A DL Sbjct: 87 AMP---RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLV 143 Query: 118 KALAALQKGKKF-----TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +A A +G+ F + LE+ G + L+P+E E+L+L AEG EIA Sbjct: 144 QACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIA 203 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L S+KT+ + + + KLG+++ + L Y L Sbjct: 204 DTLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIE 243 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 6/213 (2%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M+ + V++ DDH +VL G LEQ + VV + + + V++ D+SM Sbjct: 5 MDKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSM 64 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P +GI + IK P +++LTM++N + V+ G +LK+ + + +A Sbjct: 65 P---IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQA 121 Query: 120 LAALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + + +G + ES + L ++I LS +E +LR+ A+G +IA LN Sbjct: 122 IKTVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNI 181 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S +T+ + +++ KL + + L Y L Sbjct: 182 SYRTVETHRQNIKHKLDIHSTAELAQYALQHGL 214 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 6/210 (2%) Query: 1 MN-NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN + V+I DDHP+V GI+ LE + VVG I L V++ DL+M Sbjct: 20 MNGPIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNM 79 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P G++ + I+ P + +++L+M+++P ++ L G VLK P ++ A Sbjct: 80 PDVG---GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTA 136 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + A+ +G+++ + L + L+ +E +L A+G E+A+ L+ S+ Sbjct: 137 IDAVMRGEQYLCTGAAGSLS--PQSQTSREALTGREQTILLELAQGKSNKEVAQALDISV 194 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVT 209 +T+ + +K+ KLG+ + L Y Sbjct: 195 RTVETHRKNIKRKLGISSTAGLTRYALEHG 224 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 8/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH I+ G+ L + VV E + + + V + D+SMP Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K I P I+VLTM+ + ++ G +LK A +L A+ AL Sbjct: 59 ELNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKAL 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 GK + + + +L + + K L+ +E EV L +G +IA+ L+ S Sbjct: 119 ATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDIS 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +KT + + + KLGV N L+ Y + L Sbjct: 179 VKTAENHRGKVLDKLGVSNTAELVRYAAKHNL 210 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDHP+V G+ L +E + +VGE D ++ + +L +++ DL MP Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP- 75 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ K I+R FP + +++L+++ N + ++ +G VLK T+L +A+ Sbjct: 76 --TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIE 133 Query: 122 ALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 ++ G F +S+++ K+L+ +E+EVL + AEG E+A + Sbjct: 134 SVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASR 193 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + ++T+ + ++ M KL + N L Y + + +K Sbjct: 194 MGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKLEK 234 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 7/215 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ DDHP+V G R+ LE + VVGE E I +L V++ D+SMPG Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI + IK P + I+VLT ++ A + A+L+ G +LK + +L A+ Sbjct: 73 ---MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 122 ALQKGKKFTPESVSR-LLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ G+ +V+R +LE+ S + LSP+E EVLR+ A G EIA+ L+ Sbjct: 130 AVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDI 189 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S +T+ + KLGV + + Y Sbjct: 190 SPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWID 224 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 11/216 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + V++ADDHPIV G+R LE + VVGE + + L V + D+SMPG Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ ++ I ++LT++ L VL G V K TDL +A+ Sbjct: 64 ----NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIR 119 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G+ F ++ +R L + + LS +E EVLRL A G+ EIA + Sbjct: 120 LVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQ 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L S KT+ + + M KLG L+ + + L Sbjct: 180 LFLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGL 215 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 109/213 (51%), Gaps = 3/213 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V+I DDH +V G+R L + + VVGE + K V++ D+ MP Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + DGIT +++++ P + +I+LTM ++ + +LD + GIV K +++ A+ Sbjct: 61 --QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAI 118 Query: 121 AALQKGKKFTPES-VSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 Q G + R + + +RLSP+E+EVL L A+G+ E+A L+ S+ Sbjct: 119 QHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + ++ M ++G+ + AL+ Y L Sbjct: 179 KTVETHRQHIMRRIGLHSRAALVRYAYQNGLVD 211 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 10/221 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M N+ V++ADDH +V G+R L + + +VGE + KL V++ D++MP Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMP 87 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + I PS ++VL+ + + + G ++K A DL A+ Sbjct: 88 ---LMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDK-------RLSPKESEVLRLFAEGFLVTEIAK 173 KG F +++ L G+ + L+ +E E L G IA Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + SIKT+ ++ M KL + +L Y + + A+ Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDAN 245 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 252 bits (644), Expect = 7e-66, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 6/212 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDHP++ G+R LEQ+ VVGE D I + L+ V++ DL MPG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI + + P L ++VLTM+ + A + A L G VLK D A+ Sbjct: 77 VT---GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVR 133 Query: 122 ALQKGKKFTPESVSRLLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 A+ +G+ +V+R + + G L+ +E E+L L A G EIA++L S Sbjct: 134 AVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLS 193 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ + S KL V + + L Sbjct: 194 QKTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 9/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NV++ADDH IV G+R LE +NVV E E+ I +L ++I D+SMP Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPD-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + I P + +I L+M+ + + +L+ G +LK A +L A+ + Sbjct: 61 -MNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTV 119 Query: 124 QKGKKFTPESVSRLLEK------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +++ ++ K L+P+E E+L+L AEG +IA L+ Sbjct: 120 LSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHV 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+KT+ + +++ KLGV + L+ Y L+ Sbjct: 180 SVKTVETHRRNITQKLGVGSVAELIKYAIREGLT 213 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 10/219 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+R LE+ + VVGE + ++ + V++ DL + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQL--GA 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + + P + +++L+M ++ ++ L+ G VLK+ +L A+ + Sbjct: 61 GRNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLV 120 Query: 124 QKGKKFTPESVSRL--------LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 +G+ + ++R L A L+ +E EVLRL AEG EIA++L Sbjct: 121 ARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S+KT+ + + + M KLG+ + + L+ Y + D Sbjct: 181 VISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLD 219 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 8/217 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ DDH + G+R L++ + + VVGE + LP +A V+ D +MP Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G + P L +I L+M + S ++ +G ++K ++ +A+ Sbjct: 61 G---MNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAI 117 Query: 121 AALQKGKKFTPESV-----SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G + E V SR+ +S D+RLS +E E+L G EIA +L Sbjct: 118 ETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADEL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S +T+ + + + K G +N +L+ Y L Sbjct: 178 FISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVD 214 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 3/211 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V++ADDH +V GI K LE E + VVGE D + + +++ DL+MP Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GIT IK IK P + +++LT+++ + V+ EG + K P +L +A+ Sbjct: 61 ---RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + KG K P S + ++ Y LS +E EVL L A+G +IA++L S K Sbjct: 118 DKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+ + + + KL V + + L Sbjct: 178 TVKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 7/214 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V+I DDH ++ G+R L E + VVGE D + I K+ V++ D+SMP Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ +K + + P L +I+LTM+ + + L G VLK+ A L +A+ Sbjct: 61 ---EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAV 117 Query: 121 AALQKGKKFTPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ G+ + S+++ L + K LS +E +VL L A G+ EIA++L Sbjct: 118 RAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLV 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S+KT+ + K M KL + L+ + L Sbjct: 178 ISVKTVETYKYRIMEKLNCKKRSDLVKFALDNGL 211 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 10/219 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++++ADDH IV G++ LE VVGE D +N + L VL+TDL M G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI + + + P ++++L+M N A + L VLK +L +++ Sbjct: 60 -MSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118 Query: 124 QKGKKFTP-----ESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G ++ +++ +EK + D + L+ +E EVL L A+G EIA++L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S +T+ + + M KL + N LL Y + P + Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPEN 217 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 3/208 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH I G+ L + + +VGE + + L+ V + D+SMPG Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K + +++LTM+++P + G V+K A ++L A+ A+ Sbjct: 60 -LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK+F E V+ + ++ +LSP+E EV+RL A+G EIA+ L S KT+ Sbjct: 119 AAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVD 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + M KL + ++ Y + L Sbjct: 179 THRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 7/209 (3%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 +++ DDH ++ G+R LE + VVGE EDS I L +++ DLS+ Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSL---TNS 60 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 G+ I+ ++ P I+VLTM+++ + L G VLK+ A +L A+ A+ + Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 126 GKKFTPESVSRLLEK----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G+ + +++R L + + LS +E EVL L A G+ EIA +LN S KT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + + + M KLG+ + AL+ + L Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALDHNL 209 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 15/215 (6%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +N+++ DDH IV GI+ +L+ + ++VGE + I + +L V+I D++MP Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI I + +P +++L+M++N + ++ G +LK + KA+ Sbjct: 61 ---EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAI 117 Query: 121 AALQKGKKFTPESVSRLL-----------EKISAGGYGDK-RLSPKESEVLRLFAEGFLV 168 A+ G K+ ++S +L + I +G D+ L+ +E +L++ +G Sbjct: 118 TAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNN 177 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLN 203 EIA L SI+TI + + + M KL V+N + L+ Sbjct: 178 REIADGLGISIRTIETHRANIMKKLKVKNAVELVR 212 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 8/213 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V IADDH +V G + + VVGE D + + +++ HVL+ D+SMP + Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I FPS II+LTM L L G VLK + L A+ + Sbjct: 62 --NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKV 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + ++++ L G G LS +E E+ L A+G+ E A KL Sbjct: 120 ATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFI 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S+KT+ + + KLGV + L++ L Sbjct: 180 SVKTVETHRSKIYAKLGVNSRAELVHLALKYHL 212 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 3/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M + I DDHPI G+ L + +VG+ + + +P L +++ D+SMP Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMP--- 57 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + K FP + I++L+M+++ + +VL+ + G LK + ++ AL + Sbjct: 58 EMNGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVI 117 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + ++S LL + S + L+ +E VLRL A G E+A++L+ S++TI Sbjct: 118 HNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIE 177 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTL 210 + +++ KL ++ L+ Y L Sbjct: 178 THRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH IV G+R+ +E E + V+ E + I+ + V + D+SMPG Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ + P L +++LTM+ + ++ G + K+ AP L A+ L Sbjct: 61 --DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKL 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G +F E + LL + S GG LS +E +VLR A G EIA + S+ Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + + + KL + N+ + + L Sbjct: 179 KTVDTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 8/219 (3%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M + +++ DDH + IR LE +NVVGE ++ + ++ D+++ Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINL 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG +GI + +K+++P+ ++V TM + L L +G +LK + + A Sbjct: 61 PGK---NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAA 117 Query: 120 LAALQKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + L +G +++ L ++ + L+ +E E+L +G EIA+ L Sbjct: 118 IRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEAL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S KT+ KL V++ + Y L P D Sbjct: 178 YISDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPLD 216 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 10/213 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++IADDH IV G+R LE+ + + V E+ + K ++I D++MP Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPN--- 59 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +G + I + P +I L+M+ + + + + VLK A +L A+ A+ Sbjct: 60 MNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVG 119 Query: 125 KGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +GK + S+++ L R+SP+E EVL+L AEG +IA++L S Sbjct: 120 RGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVS 179 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IKT+ + +++ M KL + + L + L Sbjct: 180 IKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 6/219 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 +++++++I DDH IV G+++ LE VV E + + + I DLSMP Sbjct: 10 LHDLHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMP 69 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ LIK I+ FP + ++VL+M+ G V K GA +L A+ Sbjct: 70 G---MNGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAV 126 Query: 121 AALQKGKKFTPESVSR---LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G + S++ L + G +LS +E EVLR G +T+IA+ L+ Sbjct: 127 RKVATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHL 186 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S+KT+S+ K KL + AL+ Y + L+ D + Sbjct: 187 SVKTVSTHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDE 225 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 3/206 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ DDHP+V G+R LE E + V GE + L +++TD+ MP Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMP-- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L + FP + ++VL+M+++ + + L G VLK L +A+ A Sbjct: 62 -AASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEA 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G + + +LL+ + ++ L+P+E+ VL+ +EG EIA + S++T+ Sbjct: 121 VHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTV 180 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSV 208 + + KL +E AL+ Y Sbjct: 181 ETHRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ DDHP+ G++ L +V+ E +D + I + + ++I D+SMPG Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + IKR P + I++LTM + A L LD G VLK+ T+L A+ Sbjct: 61 --LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKL 118 Query: 123 LQKGKKFT-PESVSRL-------LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + P + +L + +S LS +E EVL+ A G+ EI+ + Sbjct: 119 VMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTE 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L SIKT+ + KK M K+G + AL+ Y + Sbjct: 179 LFISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 12/218 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V++ADDH + G+ L Q + +V E D + + V++ D+ MP Sbjct: 85 DPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI IK PS II+LT+++ A L + G +LK+ + ++ A+ Sbjct: 145 RT---GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIR 201 Query: 122 ALQKGKKFTPESVS-RLLEKISA--------GGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A+ G+ S++ +LL + ++ +L+ +E EVLRL A+G +IA Sbjct: 202 AVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIA 261 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 K+L S T+ + ++ + KL + + + + Y L Sbjct: 262 KQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKL 299 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 8/214 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH +V G+R L+ + VVGE + ++ + V++ D++MP + Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ ++ P +++L+M++ + + + G +LK A +L A+ A Sbjct: 70 ---SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRA 126 Query: 123 LQKGKKFTPESVSRLLEKIS-----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G F +V R L A L+P+E +VL A G IA +L Sbjct: 127 VHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGI 186 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S +T+ + ++S M KL + + L + + Sbjct: 187 SRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 10/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +NV+IADDH +V G+++ +E + V+G D + +L V++ D+SMP Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI ++ +K ++ II+LT + + L ++L G VLK L KA+ Sbjct: 69 Q---NGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIR 125 Query: 122 ALQKGKKFT-PESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G + P + L+++ S + L+ +E EVL L AEG EI Sbjct: 126 DVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDC 185 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L S KT+ + + K+ V + Y + Sbjct: 186 LFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH ++ G+ L E +VV E D + K + + DLSMP Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMP- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 + G+ ++ +K P++ +++LTM++ + L G + K +L +AL Sbjct: 65 --HMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALR 122 Query: 122 ALQKGKKFTPESVSRLL-EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G ++ E + LL + LS +E EVL L G+ ++ IA KL SIK Sbjct: 123 TVAAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIK 182 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+S+ K + KL + L++Y + Sbjct: 183 TVSTYKTRLLQKLDCTQNSELVDYALRHNI 212 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V I DDHP+V G++ L + + +VG +D + +N +L V++ D+SMP Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMP-- 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I P +++L+M++NP + + + G +LK ++ A+ A Sbjct: 66 -TMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKA 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK S+++LL ++L+ +E VL A+G EIAK LN S +T+ Sbjct: 125 VANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + +++ KLG+ + L++Y + Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 19/226 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ DDH + GI++ L+ + VV E D + + + V+I D++MP Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMP-- 93 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + +G+ + + +P +I+L+++++ + + L G +LK+ L +A+ Sbjct: 94 -HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRV 152 Query: 123 LQKGKKFTPESVSRLLEK-----ISAGGYGDKR-----------LSPKESEVLRLFAEGF 166 + +G + V+ L K ++ G G ++ L+ +E EVL+L A+G Sbjct: 153 VAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGK 212 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 IA L S KT+ + + + KL V + + Sbjct: 213 SNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 245 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 9/218 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ V++ DDH I+ G++ L + VV E + I +L V++ DL+MP Sbjct: 12 NIRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMP-- 69 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI I+ I P + +VL+M + A + G +LK A +L A+ Sbjct: 70 -EMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHT 128 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ + ++ L+ + G +LS +E EVL+L A G EIA Sbjct: 129 VASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFG 188 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 SIKT++ Q+ S M KL + N L Y L+ + Sbjct: 189 VSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGLTSIE 226 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 8/217 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH I+ G++ L + E + VV E + ++ ++ V + D+ MP Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + I S ++ L+M + + +S +L + G +LK A T+L +A+ Sbjct: 60 -QMDGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRK 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+ + S+S ++ K+ D + L+P+E E+L L AEG E+A++L+ S Sbjct: 118 VMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 IKT+ + ++ M KL ++N L+ Y + ++ Sbjct: 178 IKTVGTHRQHIMNKLKLKNLADLVKYAIRNGMISINR 214 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 5/211 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDH +V GIR L ++ + VVGE + + +L VL+ D+SMP Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ +++ FP +++++L++ +N + V+ G +LK + ++ A++ Sbjct: 62 --VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAIS 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 ++ G + +V L + + L+ +E +VL A+G E+AK L S+ Sbjct: 120 SVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISV 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +T+ S + + K+G +N L + L Sbjct: 180 RTVESHRLNLREKVGNKNAAQLYKVAQDLGL 210 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 5/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ +++ DDH +V G+R+ LEQ + V V+ E + + V++ D+SMPG Sbjct: 4 NIRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPG- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ ++ I +P +I+ +M+ N A S L V K GA DL +A+ Sbjct: 63 --MGGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVRE 120 Query: 123 LQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + +GK + +++ L+ +S + LS +E EV RL A G V EI+ L S K Sbjct: 121 VAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQK 180 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+++ + KLG+ + I L+ + Sbjct: 181 TVANYQTLLKQKLGITSPIELVRLAIKHGVIEG 213 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 11/218 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH ++ G++ L + V+GE D I+ + L +++ DL+MP Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ I+ + + L I+VLTM+++ L AVL + +G VLK+ A +L A+ Sbjct: 62 --KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIR 119 Query: 122 ALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + +G+ F +++ + K+LS +E EVLR A G +IA Sbjct: 120 TVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIAD 179 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L+ S+KT+ + K M KL + L+ Y + Sbjct: 180 LLHVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ + VV E E + V + DLSMPG Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPG-- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + + +++ +M+ N A L G V K G+ +L KA+ + Sbjct: 64 -MGGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEV 122 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +GK + S+++ L+ + G +LSP+E EV RLFAEG EIA+ L S KT Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 +++ KLG+ N + ++ + L + Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHGLIDS 214 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 7/215 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +++ADDH + +R L + + VV E ++ ++ D++MPG Sbjct: 2 SLRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + P+L +I L+ + ++ +L G + K A +L +A+ Sbjct: 61 --MDGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRT 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYG----DKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +G+ + V+ + G RL+ +E +VL+L AEG +I +L+ + Sbjct: 119 VCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIA 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+ +++ M KL + N L Y +SP+ Sbjct: 179 ASTVEVHRRNLMRKLDLHNVAELTRYAIHSGISPS 213 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 9/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I +DH +V G++ + VVGE ++ A I K +++ DLSMP Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ ++ +K+ P + I+V+TM+ + L L +G +LK P +L A+ Sbjct: 63 --KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIR 120 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 A+ GK + +S L L+ +E EV +L AEG +IA L Sbjct: 121 AIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+ + + M KL + + + N+ + Sbjct: 181 FISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 244 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 7/208 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK----LDAHVLITDLSMP 60 V++ DDH +V G+R L + VVGE + A + L + ++ITD+ M Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMR 79 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI L + +P ++++V++M++N + G VLK +L A+ Sbjct: 80 G---MGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAI 136 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G+ F ++R + + L+ +E ++L G EIA +L S++ Sbjct: 137 EAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVR 196 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSV 208 T+ + + + KLG+E L+ Y Sbjct: 197 TVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 6/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDHPIV GIR LEQ V GE ++ + + A ++I D S+P Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLP-- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ + I+R P +++ TM+ + +++ L G +LK ++L A+AA Sbjct: 63 -VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 L +G+ + VS + + G D + L+ +E EV+R +EG IA +L S+ Sbjct: 122 LIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSV 181 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ S + +AM KLG+ N + L+ Y L+ Sbjct: 182 KTVDSHRTTAMRKLGLRNAVDLVRYAIRNKLT 213 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V ++ + + + V+G+ D T + +++ DLSMP + Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ K I FP +I+LTM++ A ++ L +G ++K + L A+ ++ Sbjct: 61 --NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSV 118 Query: 124 QKGKKFTPESVS------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + L++ A +RLS +E E+L L A G+ EIA++L Sbjct: 119 MGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S KT+ K M KL ++ LL + L Sbjct: 179 SAKTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLID 213 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 3/212 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH +V G+R L+ + VV E D + + HVL+ DL+MPG+ Sbjct: 13 QIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGE 72 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + + I + P +++VLTM +PA L G VLK+ A +L +A+ Sbjct: 73 QS---LPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRL 129 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 ++G+ + + + L+ +E EVLRL A G EIA++L SI+T+ Sbjct: 130 AREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTV 189 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S + K+ + L+ Y L A Sbjct: 190 ESHRAHIQQKVRRSSRAELVRYALDHGLMDAT 221 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 243 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKL----DAHVLITDL 57 + +I+ DDHP V G+R LE + + VVGE + L H+++TD+ Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDI 62 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 SM G GI L + FP + ++VL+M+NN + ++ +G VLK +L Sbjct: 63 SMRG---MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELV 119 Query: 118 KALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ A+ G+ F + + E A G+ L+PKES L A G+ +IA++L+ Sbjct: 120 NAIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSM 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S++T+ + + + KL + L+ Y L Sbjct: 180 SVRTVETHRLNLRRKLRITGQAELVKYAIDHML 212 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 7/213 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH + +R LE+ + +VGE + LI+ + + D+ MPG Sbjct: 2 TIRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + + P + +I L+ ++ + +L+ G V K A +L +A+ Sbjct: 61 --MNGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHT 118 Query: 123 LQKGKKFTPESVS----RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +Q+ K + V+ L + R++ +E +VL+L AEG+ T IA +L+ + Sbjct: 119 VQQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLA 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+ +++ M KL + + L Y ++ Sbjct: 179 PSTVEVHRRNIMRKLDLHSVAELTKYAIRSGIT 211 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 16/222 (7%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N + + DDH I+ G++ L + GE D+ ++ + KL+ ++ITD+SMPG Sbjct: 5 NTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPG- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L+K +++ +P++ I+L+ ++N + +L+L I G VLK A DL +A+ A Sbjct: 62 --LSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEA 119 Query: 123 LQKGKKFTPESV-SRLLEKISAGGYGDKR----------LSPKESEVLRLFAEGFLVTEI 171 + KG+ + + + L G + LS +E E+L+L AEG I Sbjct: 120 VHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESI 179 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 K L S T+ + + M KL + L+ Y L + Sbjct: 180 GKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIES 221 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 5/208 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ ++VVGE E P++ VL+ D+SMPG Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPG-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + +I+ +M+ N L G V K G DL KA+ + Sbjct: 63 -MGGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREV 121 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + GK F ++ L+ ++ +RL+ +E EV RL AEG LV +IA +LN KT Sbjct: 122 KSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKT 181 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVT 209 +++ + S KLG+ + + L+ Sbjct: 182 VANYQTSLKQKLGIHSPVDLVRLAMKYG 209 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 242 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDH +V G+R +E V GE + + +L V++ D++MP + Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMP---ELN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I+ P II+LT++++ +L LD G VLK+ A L A+ AL K Sbjct: 58 GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKH 117 Query: 127 KKFTPESVSRLLEKISAGGYGD--------KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + P + +A L+ +E EVLRL A+G E+A +L+ S Sbjct: 118 APYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + + + M KLG + + L++Y + Sbjct: 178 AKTVETHRANVMRKLGASSIVDLVHYAIRNGIVE 211 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 11/220 (5%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN + ++IADDH ++ G+RK L ++VVGE + ++ K +++ D++M Sbjct: 1 MNTSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P +GI + IK+ P++ II LT+++ L ++ I G VLK P L K Sbjct: 61 P---IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKT 117 Query: 120 LAALQKGKKFTPESV-SRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIA 172 + + +G+ F P S+ +R+L + + GD L+ +E EVL+ A+G IA Sbjct: 118 ILGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L S KT+ + + K+GV + Y L Sbjct: 178 NALYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLVD 217 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 4/214 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++ADDH I+ G+R + + VVGE T ++ + + VL DLSMP Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G T I + + P ++VLTM+N+PA + + L G LK DL A+ Sbjct: 61 GWGSA---TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G + ++ +L +LS +E+EVL L +G EIA +L S+K Sbjct: 118 RAVATGARVIDPALGDVLGG-PPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVK 176 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + + K G++ + Y L A Sbjct: 177 TVETYRARLREKTGLKTRADYVRYGLEAGLLGAT 210 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 9/217 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++IIADDH ++ GI+ L+ ++ VVGE D LI + LD +++ D++MP Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI +I +K++ + IVL+M++NP + + +LK ++ KA+ Sbjct: 62 ---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAV 118 Query: 121 AALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G+K+ + ++ ++ + L+ +E EVL+ + G IA K Sbjct: 119 KAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADK 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L S++T+ + + + M KL V N L+ + + Sbjct: 179 LFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ADDH IV G+R LE + E D A + L ++I DLSMP Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ + I H P +++LTM+ + L + G +LK A DL A+ A Sbjct: 64 -ELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDA 122 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR-------LSPKESEVLRLFAEGFLVTEIAKKL 175 L +G+ F ++ + G G +R L+P+E E+L+L AEG ++ K L Sbjct: 123 LIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKAL 182 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 N S+KT + + M KLG+++ L+ Y L Sbjct: 183 NISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 242 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 6/214 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V+IADDH I+ G+++ L + E + VV + +++ I V++ D+S+P Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI IK+ P +++++L+M+ A L G + KQ A L A+ Sbjct: 65 R---SGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIR 121 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYG---DKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KGKK+ V+ L +GG LS +E + L + A G V+EIA+ L+ S Sbjct: 122 TVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLS 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +KT+S + + KL + ++ L +Y L Sbjct: 182 VKTVSMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 9/212 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+I DDHP+ G+R LE + V VVGE E + +L V++ DL MPG Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPG-- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+GI + I R P + ++VLTM + + A + G +LK+ ++ +A+ A+ Sbjct: 67 -GNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAV 125 Query: 124 QKGK-KFTPESVSRLLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ + PE R+L + + L+ +E EVL+L A+G EIA+ L S Sbjct: 126 AAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLS 185 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ + + MKL V + + L Sbjct: 186 PKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 242 bits (619), Expect = 6e-63, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 9/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH IV GIR LE+ ++VV E ++ L HV++ D++MPG Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + P + +++L+M+ + +S G +LK A +L +A+ + Sbjct: 60 -LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQV 118 Query: 124 QKGKKFTPE-----SVSRLLEKISAG-GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + V + ++ + L+P+E EVL+L AEG A +LN Sbjct: 119 ACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 ++KT+ + ++ M KL + + L Y L Sbjct: 179 NVKTVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 9/215 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ GI + +E E V+VVGE D L+N L A ++I D+SMP Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI K I+ +P + I+ L+M+ L G +LK+ T++ A+ Sbjct: 61 ---KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAM 117 Query: 121 AALQKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +GK F ++ + I + + LSP+E EVL L AEG +IA Sbjct: 118 DTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADI 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 L S +T+ + S M +L + L+ Y Sbjct: 178 LCISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 242 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDHPIV G R+ LE ++VV E +++ D V++ D+SMPG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPG-- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ I+ P I+V TM+N ++ A G V K P+ + A+ ++ Sbjct: 67 -ASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSV 125 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G++ + ++ +L S G +L +E E+LR FA G +IA LN S+KT Sbjct: 126 ARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKT 185 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + K G D L+ +S L+ Sbjct: 186 VQNYHYLIKTKTGARTDAQLVRLAASCGLT 215 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L+ V GE DS I + A VL+ DLSMPG Sbjct: 69 IKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR- 127 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LIK IK P+L I+VLTM+ G + K+ A ++L A+ + Sbjct: 128 --NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKV 185 Query: 124 QKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G + +++ + A RLS +E +V R A G +T+IA +L S K Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+S+ K + K+ + ++ AL+ Y L + Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYALRHKLIDDPDE 281 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 242 bits (618), Expect = 8e-63, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL----PKLDAHVLITD 56 M+ + V+I DDH +V G++ L Q V+ E D + L + +++ D Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMD 69 Query: 57 LSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 L MPG +G K ++ FP + I++LT ++ ++ VLK + +L Sbjct: 70 LMMPG---MNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEEL 126 Query: 117 PKALAALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 AL +G V++ L + D ++ +E EVL L AEG +IA+ Sbjct: 127 IYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAE 186 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +L+ SIKT+ + + +MK +E+ L Y Sbjct: 187 ELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 7/210 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + IADDH ++ G+R+ L Q E + VVGE + + + + VL+ D++MP Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI I + I++L+M+ + L G + K +L KA+ + Sbjct: 59 VKDGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G+++ P+ ++ + + + LS +E +V+ A+G EIA L S+ Sbjct: 119 HEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVT 209 KT+ + + + KL + N+ + + Sbjct: 179 KTVDTHRSHVLKKLELRNNSDITRFAIQHG 208 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDH +V G R+ LE V+V GE D+ L V++ D+S+PG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPG-- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++ + P +++ +++ + LD G V K AP L +A+ + Sbjct: 64 -ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTI 122 Query: 124 QKGKKFTPESVSRLLEKISA--GGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + + +S+ L +A G ++LS +E EVLRL +G+ + IA+KL S KT Sbjct: 123 ARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +++ + K G +N + L S + L Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 12/223 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+I DDHP+ G++ +E+ VGE + +L ++ D+S+P Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI +++ I P I++L+M ++ +G V+K+ L + Sbjct: 61 D---MSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGF 117 Query: 121 AALQKGKKFTPESVSR-LLEKISAGGYGDKRL--------SPKESEVLRLFAEGFLVTEI 171 AL +G+ F VS+ L+ K++ G D+ L +P+E +VLRL AEG +I Sbjct: 118 DALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQI 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 A + S KT+ + + + M KL V + + L+ Y + + L + Sbjct: 178 AAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDVE 220 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 6/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH +V G+R LE E + VVGE D I +L V++ D+ MPG Sbjct: 7 RVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGT 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI ++ ++ ++++T + L G V K P L A+ + Sbjct: 67 ---DGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRS 123 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G V+ L G R L+ +E EVL A+G EIA+ L S Sbjct: 124 VHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSE 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + + +MKL V + + + Sbjct: 184 KTVKTHVSNILMKLDVADRTQAALWAVRHGIGD 216 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 6/214 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + + I DDH IV G+R+ L + + VVGE + I+ + + VL+ DLSMPG Sbjct: 29 SMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPG 88 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ + ++ P + I++L+ ++ G + K+ P ++ +A+ Sbjct: 89 Q---SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIR 145 Query: 122 ALQKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+++ SV+ LL + ++LS +E +V A+G +IAK L+ S Sbjct: 146 TIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLS 205 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +KT+S+ + M K+G+ ++ L Y L Sbjct: 206 VKTVSTYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 10/214 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++IIA+DH ++ G++ L+ + + V GE D ++ + +++ D+SMP Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMP---R 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 DG+ + IK+ P + ++VLT++ + A L +G VLK + + A+ ++ Sbjct: 63 MDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVL 122 Query: 125 KGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 GK + VS + + + + L+P+E E+ +L AEG+ EIA+ L Sbjct: 123 GGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVV 182 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+KT+ + + M KLGV + L + Sbjct: 183 SVKTVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 11/216 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH + G+ L + VVGE + I L V + D+ MP Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMP--- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + ++ P+ I++LT++ +L + G VLK +P L + + + Sbjct: 67 VCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQV 126 Query: 124 QKGKKFTPESVS--------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 +G+ P S++ R E L+ +E EVL+ + G EIA+ L Sbjct: 127 YEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARAL 186 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + + + KL + N Y ++ Sbjct: 187 FISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIA 222 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 9/210 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +++ DDHP++ G+R+ + + V GE E++ + + +++ D+++P Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDK-- 71 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +G+ L+K ++ P L ++V++M++ VL G ++K + +A+ + Sbjct: 72 -NGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVL 130 Query: 125 KGKKFTPESV-SRLLEKIS-----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ F E + +R+LE S A + L+ +E EV RL EG EIA ++ S Sbjct: 131 SGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVS 190 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSV 208 KT+ + + KLG++ L+ Y Sbjct: 191 AKTVEVHRMNIKTKLGLKTAAELIRYTVRW 220 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 3/204 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ V++ DDHP VL G+R LE + V+G+ I + ++++D+ MP Sbjct: 4 NLRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPD- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ L FPS+ +I L+M+ +P + L + VLK+ +L A+ Sbjct: 63 --ANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRT 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G + + L + L+PKE+ VL+L AEG EIA++L S++T+ Sbjct: 121 VAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTV 180 Query: 183 SSQKKSAMMKLGVENDIALLNYLS 206 + + KL V L+ Y Sbjct: 181 ETHRLHLRRKLRVGGRAELVKYAV 204 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 6/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R+ L E ++V E + + + V++ D+++P Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPD-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K IKR P L +++ +M + L+ G + K P + AL + Sbjct: 60 -LNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTV 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGY--GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G ++ S++ RLL + G + LSP+E VL L ++G +T I ++ + S+K Sbjct: 119 VAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 TIS+ + + KL + ++ + Y+ L Sbjct: 179 TISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 12/216 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I DD ++ G++ LEQ + VVG+ E+ + + +L V++ D+ MP Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG T K I + FP++ ++VL+ ++ + L+ + +G +LK ++L A+ Sbjct: 66 --EMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIR 123 Query: 122 ALQKGKK-FTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 G F P +LL ++ ++ +E EVL L G EIA Sbjct: 124 FGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIA 183 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 ++L + T+ + S + +L ++N L Y +SV Sbjct: 184 QQLYITEGTVKTHVTSILSRLNLKNRSQLAIYANSV 219 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 6/213 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH + G+++ L ++ E + I+ L K ++ D++M Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAM-- 60 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI +K IK +P I++L+M L G + K P +L KA+ Sbjct: 61 -SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVD 119 Query: 122 ALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KG K+ P + S L S ++LS +E +V + A+G + EI+K+L+ S Sbjct: 120 KIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSIS 179 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IKT+S+ + + KLG+EN+ ++NY L Sbjct: 180 IKTVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 239 bits (611), Expect = 5e-62, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH ++ G+R LE + +VGE I +L V++ DLS+P Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG T K I++ P + I++LTM++ + + + G +LK L +A+ + Sbjct: 61 -LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEV 119 Query: 124 QKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +GK F SVS+ + + S L+ +E E++RL G+ E+A KL S+K Sbjct: 120 YRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSS 207 T+ + K + M KLG+++ L+ Y Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYAIK 206 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 10/213 (4%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 +++ DDH +V G+R LE+ VVGE E+ + K +++ D+ +PG Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPG---M 61 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 +GI + RH PS+ +I+L+M ++ + + + VLK+ + +L AL + + Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GKKFTPESVS-RLLEKISAG------GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G + VS RLL++I G + LSP+E +VLRL AEG +IA L+ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 ++T+ S +K+ M KLGV N L + ++ Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGIT 214 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 238 bits (610), Expect = 6e-62, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 6/211 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +I+ DDH +V G+ + E + VVGE + L+ L +++ DL MPG+ Sbjct: 2 HVRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGE 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G LI+ I+RH+P L I++L+ ++ ++S + G + K +P L +A+ Sbjct: 62 ---NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHK 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + K+ ++ L SA + LS +E E+ RL EG +I+++L S Sbjct: 119 VVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISD 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +T+S+ K + + KLG++N + L++Y L Sbjct: 179 RTVSAHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 238 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 5/211 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ DDH +V G+R L Q + + VV E E++ I+ + + + V + D+ +PG Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ L+K IK P +++++L+M L G + K P L A+ Sbjct: 64 KG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIR 120 Query: 122 ALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G + ++ L E LS +E EVLR A G +T+IA+ L+ S Sbjct: 121 KVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSP 180 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+++ + + K G+ ++ L Y + Sbjct: 181 KTVTTYRARIVEKTGLHSNAELTRYALDKGM 211 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 238 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 9/213 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ V++ADDH + L G+R+ L + + + + G D + +L V + D++MP Sbjct: 2 SIRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I P ++VL+M+ + ++ L G VLK+ + +L A+ Sbjct: 60 -RLNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQT 118 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ + ++ L + D LS +E +VL+L +G +IA++L+ Sbjct: 119 VANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLS 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 S T+ + ++ + KLG + L Y Sbjct: 179 ISKNTVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 238 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V IADDH + G+ LE + + VV ++ LI+ + V++ DL MP Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ K IK +P + ++VL+M + + L+L G +LK P +L A+ Sbjct: 60 -VMDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGT 118 Query: 123 LQKGKKFTPESVSRLL-----EKISAGGYG----DKRLSPKESEVLRLFAEGFLVTEIAK 173 + + +S ++ +K A G L+ +E EVL L + E+A+ Sbjct: 119 VMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAE 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KL S +T+ +K+ + K G +N L+ + L Sbjct: 179 KLFISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 8/214 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I DDHPIV G+R + + VVGE D + + V++ DL MP Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP- 68 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ ++ P++ ++VLT + + + ++ G +LK DL +A+ Sbjct: 69 --TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVR 126 Query: 122 ALQKGKKFTPESVSRLL-----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A G+ +V++ L ++ L+ +E EVLRL A G E A+KL Sbjct: 127 AAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLF 186 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S T+ + A K GV + A + L Sbjct: 187 ISEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGL 220 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 5/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IA+DH ++ GI+ E E + VG + LI + +++ITD+ MP Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI K I FP++ II +M + + +L+ G +LK + +L A+ + Sbjct: 59 VMDGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G+ + +++ +++ S L+ ++ E+L+L +G EIA +L T+ Sbjct: 119 HEGEHYYDPNIT--VKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVE 176 Query: 184 SQKKSAMMKLGVENDIALLNYLSS 207 + +K+ + KLG++ LL Y Sbjct: 177 THRKNMIRKLGLQGAGELLRYALE 200 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 10/215 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V++ DDH ++ G+ L + + V G+ + ++ + V++ DLS+P Sbjct: 2 TISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + G +IK +K S ++ LTM+ + A V++ +G +LK+ A +L A+ + Sbjct: 62 Q---GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRS 117 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + +G+ ++ ++LL +G + LS +E EVL+L A G+ EIA+KL Sbjct: 118 VYQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLY 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 SIKT+ + KLG+ L+ Y + Sbjct: 178 ISIKTVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 3/210 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L + VVGE + + +L V++ DL MP Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMP--- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++ I++ P + ++ LT + + A++ + G +LK DL A+ A Sbjct: 60 VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAA 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G+ + L G ++L+ +E+EVL + A G EIA+ L +T+ Sbjct: 120 AAGQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVK 179 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + + KLGV + Y L PA Sbjct: 180 TYVSHILTKLGVHSRTQAAVYAVQSGLVPA 209 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++ DDH +V G++ L V VV E D + ++ V++ DL MP Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ + + +P I++LT + + VL+ G +LK + ++ A+ Sbjct: 61 ---KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G+ V + +E L+ +E E+L L A+G+ IA + S+K Sbjct: 118 RKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+ + + + KL V + + Y L + Sbjct: 178 TVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQEDQ 213 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 5/213 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADD ++ GIR +E + + E D I+ + +L V++ D++MP Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + + I++ P+ I+VL+ + P I+ L + G +LK +L +AL Sbjct: 61 GP---SGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQAL 117 Query: 121 AALQKGKKFTPESVSRL--LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G++F + + +L+ +++E+LRL A G EIA+ L S Sbjct: 118 EMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + M ++GV + L + + Sbjct: 178 PKTVEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHP+V G+ LE E + VVGE D + L V++ DL+MPG Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ I+ IKR P+ ++VLT + + + G +LK D+ +A+ + Sbjct: 61 --DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVV 118 Query: 124 QKGKKFTPESVS-RLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G V+ +LL ++ G ++ L+ +E +VL L A G EIA +L+ + Sbjct: 119 YRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITE 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +T+ + KL V ++ L Sbjct: 179 RTVKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 3/210 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDH +V G+R L + VVGE + + +L V+I DL MP Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI + ++R P +I LT ++ +D G +LK + L A+ Sbjct: 67 --VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 A +G+ +R L + + L+PKE VL+L A G+ +IA+ + T Sbjct: 125 AAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEAT 184 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + KLG+E+ Y L+ Sbjct: 185 VKTHVSRLLGKLGLESRTQAALYALRHGLA 214 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP+ G+R L + V+ E ++ + L K+ +++TD++MP Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L++ IK S +++L+M++N + A + +G +LK +L +A+ + Sbjct: 59 QMDGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK++ V L + A G ++ +E VLRL + G IA++++ S++T+ Sbjct: 119 AAGKRYFSADVINTLSQELASG-KQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVE 177 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTL 210 + K++ KL +++ L+ Y L Sbjct: 178 THKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDH IV G+++ + + V E + +++ L +L+ D++MPG Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ LI+ ++ P+L ++VL++++ + S L G + K P L A+ L Sbjct: 61 --SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKL 118 Query: 124 QKGKKFTPESV--SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G +F + + + E + LS +E +VL++ A G + EIA S KT Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IS+ K M KLG+ N+ ++ Y L Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 14/216 (6%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADD IV GI L + + VVG +D + + + V++ DL MP D Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMP---RCD 58 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I++ P ++VLT + L L G + K ++ +A+ A+ G Sbjct: 59 GVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSG 118 Query: 127 KKFTPESVSRLLEKISAGGYG-----------DKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + V R L + G L+P+E+EVL L AEG EIA+ L Sbjct: 119 EAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARAL 178 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + S T+ + + K G + + Y L+ Sbjct: 179 HVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLA 214 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 7/209 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ DDH IV G+ L + V+ E D I + + I DL +P Sbjct: 9 TIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLP-- 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ I I+ P I+VLT + + L G +LK DL A+ + Sbjct: 67 -RMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRS 125 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK P V+ L + +G L+ +E +VLRL +G EIA L+ S T+ Sbjct: 126 VHAGKSRIPTVVAERLAERMSGS----ELTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + KLGV + L Sbjct: 182 KTHINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + + DDH + L GIR L++ + V L+N L A V++TD+ MPG Sbjct: 2 IRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVELLNLLKTTRADVVLTDIRMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++L + I R FP+ +I LTM ++ + +LD G ++K +L +A+ + Sbjct: 60 -MDGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTV 118 Query: 124 QKGKKFTPESVSRLLE--KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G + + + K RL+ +E +VL L A+G +IA+ L S T Sbjct: 119 ARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSS-VTLSPADKD 216 I + +K+ K+G+ ++I LL S + +P D D Sbjct: 179 IDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTD 214 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 11/220 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I +D ++ G+R L+ E V VVGE D + LP V++ D+ MP Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMP-- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI LI+ + R P ++ I+LT ++ + L G +LK +L A+ Sbjct: 62 -RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEK 120 Query: 123 LQKGKKFTPESVS--------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G+ ++ RL + + G LS +E EVLRL A G EIA+ Sbjct: 121 VHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARA 180 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L + T+ + S + KLG + Y A Sbjct: 181 LYITEGTVKNHISSILRKLGFRDRTQAALYALERGWIEAP 220 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 9/213 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V+I DDH I+ G+ + + ++V G +++ + K V++ D+S+PG Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGK-- 77 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ LIK I +P ++++VL+M+ VL G ++K L A+ + Sbjct: 78 -SGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVL 136 Query: 125 KGKKFTPESVS-RLLEKISAGG-----YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G E V+ R+L+ +S + LS +E EV +L +G+ +IA++L+ S Sbjct: 137 AGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLS 196 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +KT+ + + S KL +++ L++Y S S Sbjct: 197 VKTVEAYRASIKQKLYLKSGPQLVHYAISWQQS 229 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 5/212 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ DDH IV G R L++ + + V+ E D T + K +++ D+S+PG Sbjct: 3 NVITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I++ I+V +M+ NP+ G + K P DL +A+A Sbjct: 63 Q---SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIA 119 Query: 122 ALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + K K +++ L EK+ L+ +E E+LRL + +IA+ LN S Sbjct: 120 EVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISP 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+S+ KLGV +DI L + L Sbjct: 180 KTVSNSHYIIKKKLGVSSDIELTRLAIKMNLV 211 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 4/209 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ +DH +V G+R LE V VVGE + L K+ A V I D+S+P Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDGT 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI L + ++ FP L ++ L+M+ + + L +G V K +L A+ A+ Sbjct: 62 ---GIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAV 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+++ +++ RL ++ + LSP+E EVLRL A+G E+A+KL S KT+ Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 ++ ++ M KLG+ + LL Y + Sbjct: 179 ATYRERGMEKLGLASRSELLRYAARKGWI 207 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 9/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++V++ DDH + +R LE + V+GE D + + V++ D+SMPG Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPG 80 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+T + +K P+ II+LTM + + + +LK + + A+ Sbjct: 81 ---VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIR 137 Query: 122 ALQKGKKFT-PESVSRLLEKIS-----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 A+ +G+ P+ ++LL + L+ +E ++LRL A G EIA +L Sbjct: 138 AVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAEL 197 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + + T+ ++ KL V++ Y S L Sbjct: 198 SLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLITRKD 237 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 12/221 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + ++I DDHP+ G++ L + V GE + + + D+S+P Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI L + +++ PSL I++++M+ ++ L + G + K A +L L Sbjct: 61 DR---SGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGL 117 Query: 121 AALQKGKKFTPESVS-----RLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEI 171 A+ G+ + ++S LL K L+P+E EV+RL EG E+ Sbjct: 118 RAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEV 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 A L S+KT + S M KLG++N + L+ Y + + L Sbjct: 178 AAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 9/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + +++ DDHP+V G ++ L E + +VGE ++ + V+I DL+MP Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPS 62 Query: 62 DKYG--------DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAP 113 D G+ I+ I H P ++VLT + V++ +G + K+ AP Sbjct: 63 DANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAP 122 Query: 114 TDLPKALAALQKGKKFTPESVS-RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +L +A+ A+ G+++ E + R+ E SA G L+ +E ++ L AEG V+ +A Sbjct: 123 DELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVA 182 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 +++ S KT+ + + + KL + N+ L++ + A Sbjct: 183 EEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQA 223 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDH IV G+ LE + V GE D ++ L V++ D++MP Sbjct: 2 TVRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I P + +IVL+M+N + + +LK+ A + L A+ A Sbjct: 59 -ELNGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRA 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G+ + E V + ++ LS +E EV++L EG EIA+ L+ S K+I Sbjct: 118 VIRGECYFGEGVD-APQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSI 176 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + M+KLGV N AL+ + ++P Sbjct: 177 ETYRSRLMVKLGVGNIPALVKFALQHGITP 206 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 4/211 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ D+HP+VL G++ LE + + V G + ++ ++ V++ D++MP Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI I+ + FP + +++L+M+++ +S+ + G VLK + ++ A+ Sbjct: 64 -KLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIET 122 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G + V L A D L+P+E ++L L G EIA+ L S T Sbjct: 123 VADGGTYFSSGVFDALMGERAEEGSDP-LTPREHDILGLIVAGRSNREIAEVLGISSATA 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + +K+ KLG+ L+ Y ++ + Sbjct: 182 ETHRKNLKKKLGIATTAGLIRYALDHGIASS 212 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 9/210 (4%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 +I DDH ++ GI+ L+ V E E + L + ++I D+SMPG Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPG---MG 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ I+ I+ H+P++ I+VL+M+ + + + G + K A +L AL L +G Sbjct: 58 GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQG 117 Query: 127 KKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +++ + + L I A L+ +E EV G+ +TEIA++L+ S+K Sbjct: 118 RRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + KK KL L+ L Sbjct: 178 TVDTHKKHIYEKLHCSRRSELVTLALRNGL 207 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 119/209 (56%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDHP V+ G R L + VV +ST L+ L VL++D +MPG Sbjct: 6 PIRIVIADDHPAVVIGARYELSATNTLAVVASANNSTELMETLANHPCDVLVSDYAMPGT 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +YGDG+ + I + +P+L I+V+TM N L A+LDL I +V K + L A+ A Sbjct: 66 EYGDGLAMFSAILKRYPNLRIVVMTMMENAVALRALLDLGIACVVSKSDMTSHLTMAIHA 125 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 ++ S+ R+L G LS +E EV+RLFA G V +IA++L+RS KTI Sbjct: 126 AYTNGRYLSPSMDRILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTI 185 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+QK SAM KLG+E D+ L+ Y + L Sbjct: 186 STQKSSAMQKLGIERDVDLVRYAIACGLV 214 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 235 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 5/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH +V G++ ++ ++ V VV E + ++ + +AHVL+ D+SMPG Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ L++ +K +P L I+VL+M + + VL G V K L A+ + Sbjct: 60 -LSGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKV 118 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G ++ ++ L + ++L+ +ES++LR+ G VT+IA +L+ S KT Sbjct: 119 ASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYL 205 +S+ K AM KL +N++ LL Y Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYA 202 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH ++ I L I + +V E++ + + + + V++ DL MPG Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ + R P + +I LT+ + + L +G V K +L +A+ ++ Sbjct: 60 -MGGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+++ V+R + S G G+ L+P+E EVL G T IAK L S K Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+S+ + +LGV ND L L A D Sbjct: 179 TVSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKSD 214 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH +V GIR+ LE ++ VVGE + K +++ D+SMPG Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ K I R + +IVL+++ I + V+ + G + K P ++ A+ + Sbjct: 62 ---GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKV 118 Query: 124 QKGKKFTPESVSRLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+K+ +++ + + + G + LS +E E+ + +G V +IAK LN S K Sbjct: 119 AAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+++ + KL V D+ L + L ++ Sbjct: 179 TVNTHRYRMFEKLNVSTDVELTHLALRHKLINSEN 213 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 15/222 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH + G++K L+ E + V GE ++ +++ + L ++++ D++MP Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ KY+K P +I LT++ + L ++ G +LK L +A+ Sbjct: 67 --LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQ 124 Query: 122 ALQKGKKFTPESVSRLL------------EKISAGGYGDKRLSPKESEVLRLFAEGFLVT 169 + KG F +++ L I + L+ +E E+L L A+G+ Sbjct: 125 EVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNK 184 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EI+K+L S KT+ + + + K+ V + + + Sbjct: 185 EISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVV 226 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 10/222 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++++ DDH + G+ L VVGE + +L V++ D+ +P Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + IKR P + +++LT+ ++ L + +G ++K +L L Sbjct: 61 GI---DGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQL 117 Query: 121 AALQKGKKFTP-ESVSRLLEKISAGGY------GDKRLSPKESEVLRLFAEGFLVTEIAK 173 L +G+ +R+LE+ + D LSP+E EVL L A EIA Sbjct: 118 RGLARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAA 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 +L+ S T+ + K+ + KL + + Y + L P K Sbjct: 178 RLSISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIPPPK 219 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 5/217 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDHP L G++ L + + + G +ST LI L VL++D +MPG Sbjct: 5 QIRVVLADDHPATLGGVQHGLSSVPTIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPGG 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 YGDGI L Y++R++P++ ++VLTM +NPA++ +L L I IV K A L A+ A Sbjct: 65 AYGDGIALFSYLQRNYPAVKLVVLTMLDNPAVIKGLLGLGISCIVSKSDAVDHLIPAVHA 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYG-----DKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G + S +++ +SA + LS +E EV+RL+A G V EIA+KL+R Sbjct: 125 AATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKLSR 184 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S KTIS+QK AM KLGVE DI LL Y + A Sbjct: 185 SKKTISTQKARAMQKLGVEKDIDLLRYAMEHGIVAAP 221 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 11/217 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADDH ++ G+R ++ VVGE D AL+ + ++ A VL+ DLSMP Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ IK +K + I+VLTM+ + + G + KQ ++L A+ Sbjct: 61 ---RVSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAI 116 Query: 121 AALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + G+++ + +L +A L+ +E EVL+L G +T+IA Sbjct: 117 RTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAG 176 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L+ S+KTI + K M KL + + L++Y L Sbjct: 177 LLHLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGL 213 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 7/216 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +IADDH I+ G++ L + V E + + L K L+ DL+MPG Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI LIK IK FP L I++L+M+ L G + K A T L A+ + Sbjct: 61 --NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKV 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G F ++V+ L L+ +E ++ + +G VTEI ++LN S+ Sbjct: 119 ADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+S+ K S + K+ + N L+ Y L + Sbjct: 179 KTVSTHKASILAKMNLRNSAELVRYAIQHRLIDEND 214 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 10/217 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +I+ DDH ++ G R LEQ VVGE I +L V++ DL+MPG Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPG- 68 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + IK P ++++V+T +P + L G VLK + AL Sbjct: 69 --VDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRR 126 Query: 123 LQKGKKFTP-ESVSRLLEKISAG------GYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 L G+ E +RL++ ++ + L+ +E EVL L A G EIA++L Sbjct: 127 LLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAREL 186 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S T S ++ + KLGV + + + L Sbjct: 187 VISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIE 223 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 3/211 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + V + DDH IV G+ L + VVGE + + + A V++ D+ MP Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + +KR P II+L+ + A + L + K+ P L +A+ Sbjct: 61 GG--IDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAI 118 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 GK ++ + + + D L+ +E EVL+L AEG EIA +L S + Sbjct: 119 RGAMAGKAVLAPALMQRILEAQTSKAAD-TLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+ + S + KLG+ + Y L Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP+V G+ L + VG+ D +N + + V++ DL +P Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++++ + P+ +VLT + + L+ G +LK +P ++ +A+ ++ Sbjct: 59 QLSGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSI 118 Query: 124 QKGKKFT-PESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G +R+L++++ D+ LS +E +VL+L G IA LN S TI Sbjct: 119 YEGGAALQSGIAARVLKRLATEPAEDE-LSQRELDVLQLLVRGESNKAIALSLNISENTI 177 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KL V + + L Sbjct: 178 KSHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 5/206 (2%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDH +V GIR L+++ + VVGE + + L VL+ D+SMP + Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMP---VMN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ +++ P +++++L++ +NP + V+ G +LK + ++ A+ ++ G Sbjct: 58 GLEAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASG 117 Query: 127 KKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 + +V L + L+ +E +VL A G E+AK+L S++T+ S Sbjct: 118 GYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVES 177 Query: 185 QKKSAMMKLGVENDIALLNYLSSVTL 210 + + K+G +N L + L Sbjct: 178 HRLNLREKVGNKNAAQLYKVAQDLGL 203 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 234 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 6/212 (2%) Query: 1 MN-NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN V++ DDH +V G+ L +VVGE A + + ++I DL+M Sbjct: 1 MNTRTRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG DG+ ++ ++ + ++VL+M++ ++ L +G +LK +L A Sbjct: 61 PGI---DGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFA 117 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + ++ +G+++ ++ R ++ L+ +E EVL+L A G + +A+ LN S Sbjct: 118 IESVLRGQRYLAAAIDR--ARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISP 175 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T + + + M KL V N + L+ +S L Sbjct: 176 HTATRHRANLMQKLNVHNQVELVRIAASQGLI 207 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IA+D +V G+ L ++ V +VGE ED I L V++ DLSMP Sbjct: 2 TVRILIAEDQQLVRQGLVALLA-VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + IK+ P + ++VLT+ N ++ L +G LK+ +L A+ A Sbjct: 59 -ELDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINA 117 Query: 123 LQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + GK + +S L E + G L+ +E EVL+L A G EIA +L +IK Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T+ + + M KL + N L Y L Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 9/212 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V G+R + + VVGE + + + +++ DLSMP Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMP--- 57 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI IK + FP +IIVLT ++ + L + LK P +L K + Sbjct: 58 EMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQV 116 Query: 124 QKGKK-----FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ P ++ + + +L+ +E +VL A G EIA L S Sbjct: 117 HGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFIS 176 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ + + + KL V + + L Sbjct: 177 EKTVKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 5/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH + G R+ LEQ + V+VVG+ + + +L V++ D+ +PG Sbjct: 5 RIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPG- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I+ P ++++T ++ + D+ G + K +L +A+ A Sbjct: 64 --MNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G ++ L ++ L+ +E VLRL AEG +IA +L S +T+ Sbjct: 122 VAGGNSVLQPTLMAAL--LAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KLGV + + S L Sbjct: 180 ERHCDRIYGKLGVTSRTEAVVRAISANLLDVSD 212 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 9/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH IV G+R L + + VVGE + + +L +++ D+ MP Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMP--- 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI I+ I+ II LT L + G +LK P +L +A+ + Sbjct: 62 VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRV 121 Query: 124 QKGKK-FTPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G+ P+ ++L ++S G + L+P+E + L+L A+G IA+++ Sbjct: 122 HRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFV 181 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + S + KL + N + Y ++ Sbjct: 182 SEATVRTHMTSILSKLHLANRVEATLYALREGIA 215 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 7/214 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 + + +++ DDH +V G+ SL + +NVVGE ++ + K V++ DL +P Sbjct: 4 LKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLP 63 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G ++R +P +++ T + + + G +LK A +L A+ Sbjct: 64 G---ANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G++ ++++ L AG +S +E EVL+L A G EIA L S + Sbjct: 121 RAVAAGERHLSAALAQRL----AGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEE 176 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + +K+GV + + L + Sbjct: 177 TVKRHASNLFVKMGVADRAQATSEGIRRGLIQLE 210 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 3/212 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH +V G+R L E + VVGE + + +L V++ DL MP Sbjct: 13 TVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMP-- 70 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGIT + ++R P +I LT ++ ++ +LK + L A+ A Sbjct: 71 -VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+ +R L + + L+PKE+ VL+L A G +IA + S T+ Sbjct: 130 AARGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + + KLG+++ Y ++ + Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALKYGIASLE 221 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 5/209 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ +DH IV G+ L+ E +VGE E+ + + V++ DLSMP Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMP-- 71 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI K IK++ ++ I++L+ + + L+ +G LK+ P L ++ A Sbjct: 72 -KMDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIA 130 Query: 123 LQKGKKFTPESVSRLLEKISA--GGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + +G V+ L SA L+ +E EVL+ A+G EIA +L+ + + Sbjct: 131 IYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVT 209 T+ + + + KL V++ Y Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ LE + V+GE D + + +L V++ DL M G Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI K I R IIVLT + + V++ +LK ++ A+ A Sbjct: 60 -MDGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAA 118 Query: 124 QKGK-KFTPESVSRLLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 KG+ K + ++L ++ G + L+ +E E+L L AEG EI ++L +I Sbjct: 119 SKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITI 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + + + KL V + Y L Sbjct: 179 KTVKTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 233 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 7/210 (3%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +IIADDH I G+R+ L + +VGE + L+ L + +++ DLSMPG Sbjct: 3 RIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGI-- 60 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 GITL++ + + IIVL+M+ + L +G V K A L A+ + Sbjct: 61 -SGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVS 119 Query: 125 KGKKFTPESVSR--LLEKISAGGY--GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G+ F + S+ +L ++ RL+ +E EV + G ++ IA+ L+ SIK Sbjct: 120 QGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+S+ K + + K+ E L+ Y L Sbjct: 180 TVSTHKTNLLAKMDAETTADLVRYALRHDL 209 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 8/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + V++ DD IV +G++ + + +VGE A I L V++ D++MP Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMP- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+T + I R P +++LT ++ L + G +LK P D +++ Sbjct: 65 --QMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQ 122 Query: 122 ALQKGKKFTPESVSRLLEKI-----SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 KG + + L ++ + ++P+E +VL+L A G EI++ L+ Sbjct: 123 QAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLH 182 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 + KT+ + S + ++GV++ L + +S Sbjct: 183 ITEKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 6/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + + + DDH +V GIR LE + VVGE + L + +L+ D+ G Sbjct: 5 TIRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAFDLLQRTPVDILLMDV---GL 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + +G+ L + ++ +P++ +++L+M +N +S+ L + G VLK+ ++ A+ A Sbjct: 62 RDINGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G F ++R L K + L+P+E EVL + A+G +A+ L S++T+ Sbjct: 122 IAAGGSFYSGDIARKLVK---PAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + + S KL ++ LL + + P D Sbjct: 179 ETHRLSIRRKLAIDKPADLLKHALAHGWVPYD 210 >UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2 Tax=Flexibacteraceae RepID=C6W5G0_DYAFD Length = 219 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + + IADDH + G L I + E + L++ LP ++ DL MP Sbjct: 1 MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQELLDRLPANTPDIVFMDLQMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI + FP++ IIV++M N + +L+ ++G +LK +P ++ KA+ Sbjct: 61 ---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKGVQGYLLKDTSPDEVEKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR----------LSPKESEVLRLFAEGFLVTE 170 + + + + VS+ + + +K LS +E EVL+L +G TE Sbjct: 118 RRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLSTTE 177 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 I KL S++T+ + + K G ++ A + + L Sbjct: 178 IGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAYKNQL 217 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDH +VL G R L + V + + L ++ +++TDL++ G Sbjct: 8 SKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGG 67 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ LIK + FP I+V +M++ + L G V+K A+ Sbjct: 68 R---SGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVR 124 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G+++ ++ + K ++LS +E EV RLF EG EIA +L Sbjct: 125 TVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQL 184 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 N S KT+S + KLG ++ Sbjct: 185 NLSPKTVSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 109/213 (51%), Gaps = 10/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLP--KLDAHVLITDLSM 59 + VIIADDH +VL G+ ++ + V+G + L +LD + + D+ M Sbjct: 5 EKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDM 64 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P DG+ + I+ +P++ +++LTM+NN + + ++ G +LK ++L A Sbjct: 65 P---VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNA 121 Query: 120 LAALQKGKKFTPESVSRLL-----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + + G+++ ++V+ L E A +L+ +E EVL L +G EI+K+ Sbjct: 122 IRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQ 181 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 L + T+ + +++ + KL V+N L+ Y++ Sbjct: 182 LFIADTTVETHRRNLIDKLEVKNSKELILYVAK 214 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+++ DDH ++ GIR LE ++VVGE D + + +L V++ D+ MP Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ ++R P +++LT + +++ L ++G +LK L A+ + Sbjct: 59 RMTGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRV 118 Query: 124 QKGKKFTPESVSRLLEK-------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ P V+ +++ + L+ +E EV+RL A G EIA L Sbjct: 119 ANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLG 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 + T+ +Q + + KLGV + + + Sbjct: 179 TAEGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 5/208 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N+ V++ DDH +V G+R LE + + V GE E T + ++ V++ D +P Sbjct: 3 KNIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPD 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GDGI +KR FP + II+LT + +++ + +G +LK +L + Sbjct: 63 ---GDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQ 119 Query: 122 ALQKGKKFTPESVSRLLEK--ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 A+ KG+ SV+ +L S + L+PKE ++L + + G EIA+ + S Sbjct: 120 AVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKISD 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSS 207 KT+ + + + KL V N +Y Sbjct: 180 KTVRNYVSNILQKLNVSNRTEAASYWMR 207 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 6/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + VIIADDH I+ G+++ L + E + V+ E +++ I + +A VL+ D+S+P Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDR 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ +KYIKR +++++L+M+ L G + KQ A ++L A+ Sbjct: 67 ---SGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQT 123 Query: 123 LQKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + +GKK+ V+ +L + LS +E + + A G VT++A KL+ S+ Sbjct: 124 VARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSV 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+S + + K+ ++++ L +Y L Sbjct: 184 KTVSMYRARLLEKMQLKHNAELTHYAFKHNLV 215 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 232 bits (594), Expect = 5e-60, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 7/216 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN +N++IADDH + L GI LEQ + ++ + + + + K +I D+SMP Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALEIIKKGVVDFIILDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI L K +K+ P++ I++++ ++N I+S ++ + + G +LK A +L KA+ Sbjct: 61 ---EMDGIELSKILKKQHPNVKILIVSTHSNVMIVSRLIRIGVNGYLLKNAAKEELLKAI 117 Query: 121 AALQKGKKFTPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ + E + KI LS +E E+L L A + EIA+K Sbjct: 118 NTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEKTF 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S+ T+++ +++ + KL +N L+ Y L Sbjct: 178 ISLNTVNTHRRNLLSKLNAKNTAGLVKYAVENGLVD 213 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 8/217 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R LE E + V GE D +L+ V++ DL MPG Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPG-- 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ ++ + ++V+T + ++ + G V K P L A+ ++ Sbjct: 66 -VDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK-----RLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G V+ L + G D+ L+ +E EVL L A+G EIA+ L + Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+ + + +MKLGV + + ++P D+ Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHGIAPEDQ 221 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 6/210 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + VI+ADDHP+ G++ LE+ E V +VGE D + +L V + D+ MP Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGITL + IK + ++ I+LT ++ + A L +G VLK + L KA+ Sbjct: 61 G---ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G F V+ + + A + LSP+E EVL A G E+A +L S + Sbjct: 118 QTVATGSLFLDSEVASV---VGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISER 174 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + S KLG N + L Sbjct: 175 TVQTHLASVYDKLGAHNKTEAMLLALKHGL 204 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 126/210 (60%), Gaps = 3/210 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VI+ADDHP+++FG+R++L + VV + D AL L + VL+TD SMP Sbjct: 3 IRVIVADDHPLIIFGVRQALASAPGIRVVADAPDPGALTELLRNVPCDVLVTDFSMPCGA 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ +++ FP + ++VLTM N ++ ++ D+ + GIV K+ ++LP +AA Sbjct: 63 TPDGLAMLTSLRQRFPHVRVVVLTMLENAGLMVSMQDVGVLGIVNKRDDLSELPAVIAAA 122 Query: 124 QKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + ++ SV L E + + ++LSP+E+EV+R++ G +E+A+ L+RSI Sbjct: 123 FRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSIN 182 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 TIS+QK +AM KLGV ND L +Y L Sbjct: 183 TISTQKTNAMRKLGVSNDAELFDYAQKHGL 212 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 3/210 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +NV + DDH +V G + L + VVG++ + +L KL+ V + D++MP Sbjct: 1 MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + G++L+ +++ P+ I+L++ + A + + LD G + K+ P +L +A+ Sbjct: 61 DE---SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G + R L + L+P+E E+ L G V IA++L+ S K Sbjct: 118 RAVHAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + + + KL + L+++ L Sbjct: 178 TVHVHRANVLDKLHCATTVELVHFALQHQL 207 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 12/209 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M ++ V+IADDHP+ G+ L V+ E + L +++ D+ MP Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI + I + II++TM + + + + G VLK D+ +A+ Sbjct: 61 D---LNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAV 117 Query: 121 AALQKGKK-FTPESVSRLLEKISAGGYGD--------KRLSPKESEVLRLFAEGFLVTEI 171 A+ KG+ F+ SR+++ + G L+ +ESEVL L ++G +E+ Sbjct: 118 RAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEV 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIA 200 A+ L S KT+ + + + KL V + Sbjct: 178 AETLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 4/211 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDHP VL G++ L E + +VG + I + KL+ V + DL +PG Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + IK+ P +I+L+ N + +D V+K P L +A+ A Sbjct: 60 -LNGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAA 118 Query: 124 QKGKKFT-PESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 ++G+ P +++++ + G + L+P+E EVL G +IAK L S T+ Sbjct: 119 RRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + + + KL V++ + L Sbjct: 179 KTHVSNILKKLDVKDRTQAVIKAIENNLVDR 209 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 4/213 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD-AHVLITDLSM 59 M M++I+ DDH IV G++ L NV+ +F + L+ +L + ++I DL M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P +GI + IK +P + ++VL+ + + V+D +G +K P L Sbjct: 61 P---ELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINT 117 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + + G++ V ++ + + LS +E EVL+ +EG EIA+KL S Sbjct: 118 IKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSE 177 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + KL V + Y L Sbjct: 178 KTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 16/219 (7%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH IVL GI L +VGE + + +L +++ DL+MP Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI IK P + ++VLT + + + L G +LK P L +A+ + Sbjct: 60 -IMDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRS 118 Query: 123 LQKGKKFTPESVSRLLEKI-------------SAGGYGDKRLSPKESEVLRLFAEGFLVT 169 KG +SR L S + L+P+E EVL L +G Sbjct: 119 AYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNK 178 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 +IA+ L + KT+ + S + KL + + + + + Sbjct: 179 DIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPL 217 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 10/215 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-LDAHVLITDLSMPGD 62 + I +DH IV G+++ L + + V+ EF +++NL K +++ D+++PG Sbjct: 2 ITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ L + IK+ +P II+LTM+ + D +G K ++L + Sbjct: 61 --MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKK 118 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+K+ +SVS++L K S+G L+ +E EVL G EI KL Sbjct: 119 IYNGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLC 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S +T+ + + + + K G++N + L+ + +L Sbjct: 179 ISTRTVENHRANILRKFGLKNTVELVKFAIENSLV 213 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 232 bits (592), Expect = 8e-60, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+I DDH +V GIR+ LE + V+VV + E + + V++ D+ MPG Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG + + +K+ P++ +I +T + + + VL L G + K+ ++ A+ + Sbjct: 67 --DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKV 124 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 KG+K+ +++ + S D LS +E +V+ + G V +IA +L S K Sbjct: 125 AKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSK 184 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 TI+ + KLG++ND+ L + D Sbjct: 185 TINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPND 220 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 10/215 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIE-WVNVVGEFEDSTALINNLPKLD-AHVLITDLSMPG 61 + +++ADDH +V GI+ LE+ ++VV E + +++ K V + D++MP Sbjct: 2 IRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP- 60 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI ++ + + P +IVL+M ++ A + G V+K + ++ +A+ Sbjct: 61 --ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIK 118 Query: 122 ALQKGKKFTPESVSRL-----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ + VS+ L K S L+PKE ++L+L AEGF EIAK+ Sbjct: 119 EVSAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFG 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+ T+ + + M KL + L+ Y ++ Sbjct: 179 LSLNTVHVHRNNIMRKLDIHKQAELVRYAIKEGIA 213 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 NN +V+I +DH ++ G+R L +V GE D L +++ DLS+PG Sbjct: 3 NNCSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI I IKR P + II L+++ N + L ++G VLK + DL A+ Sbjct: 63 ---MNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMR 119 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + GKK + L ++S G L+ +E VL+L AEG ++ Sbjct: 120 VVLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIY 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +N S KTI + S M KLG+ N L+ S+ L Sbjct: 180 MNLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 8/211 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDHP++ G+ L VVGE D ++ L V++ DL MP Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G+ +++ ++ ++V T ++ +L L G +LK + T++ A+ Sbjct: 61 GTG---GVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAV 116 Query: 121 AALQKGKKFTPESV-SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G P + +R+L+++ + L+P+E EVLRL A G E+A+ L S Sbjct: 117 RTVHAGGSVIPPEITARVLKEMRGES---EPLTPRELEVLRLVARGLTNREVARALFISE 173 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +T+ S + KL EN + L Sbjct: 174 RTVKFHVSSLLAKLRAENRTQAVAIARERGL 204 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 9/210 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH I G+ + + + VV + E+ +I + V + DL MP Sbjct: 6 TIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEV 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + G+ I I S IIVLT ++ + L +G +LK+ P +L A+ Sbjct: 66 E---GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRT 122 Query: 123 LQKGKKFTPESV-SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + +G K+ P V ++L++++S + LS +E EVLR A+G +IA L+ T Sbjct: 123 VHRGHKYIPPDVGAKLVQRLS-----NPELSERELEVLRSLAQGMSNADIADALSIGEGT 177 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + S + KL V + + + Sbjct: 178 VKSHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 11/215 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M V+I DDH ++ G+ L + V+GE + + +PKL +++ D++MP Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMP--- 56 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + +K+ +P L +++LT++ L + +G +LK P +L +L A Sbjct: 57 VLDGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAA 116 Query: 124 QKGK-KFTPESVSRLLEKISA------GGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ + +++L++ G ++LSP+E EVLRL + G EIA KL Sbjct: 117 ISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLY 176 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + T+ + + + KL + N + Y L+ Sbjct: 177 VAESTVKNHMRHILEKLHLRNRSEAVGYAIRTGLA 211 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DDH + G+ L + VVGE ++ A ++ + + +++ DL MP Sbjct: 13 STRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMP-- 70 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + IK P++ II++T+ P L L + G +LK + ++ A+ Sbjct: 71 -VIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQ 129 Query: 123 LQKGKKFT-PESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + +G+ F P+ V + L +++ D + L+P+E +VLRL +G EIA++L Sbjct: 130 VLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELI 189 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + + KLGV + + L Sbjct: 190 ISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 14/222 (6%) Query: 1 MNNM-NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M+N+ V++ADDH V GI+ LE + VVGE D + + +LI D+ M Sbjct: 1 MSNIIRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P GI +++ ++ ++ II+L+M+ + + + +G +LK + + KA Sbjct: 61 PNLT---GIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKA 117 Query: 120 LAALQKGKKFTPESVSRL----LEKISAGGYGDKRL------SPKESEVLRLFAEGFLVT 169 L A+ G K+ +S + L +A + L + +E E+L L G Sbjct: 118 LHAVSSGGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNK 177 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EIA+ L S +T + + M KL V+N + L N + +L Sbjct: 178 EIAEALEISKRTAEVHRFNLMKKLKVKNLMELSNKAAEYSLI 219 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 10/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH IV G R+ +++ + VVGE D + K+ V++ D++MP Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMP--- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI K IK+ P+ +I++LT + + A+L+ +LK T L +A+ A+ Sbjct: 64 RLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAV 123 Query: 124 QKGKKFT-PESVSRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ P + R+++++ + L+ +E EVL++ A G +IA +L Sbjct: 124 YAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLY 183 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S +TI + + KL V + + Y Sbjct: 184 LSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 9/218 (4%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M N + V+IADD ++ G+ L+ + V+GE + +L V+ D+ M Sbjct: 1 MENLIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG GDG+ + I++ P+ ++IV+T + + L+ GI+LK + TDL + Sbjct: 61 PG---GDGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEG 117 Query: 120 LAALQKGKKFTPES-----VSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ S ++ + S + L+P+E + + +G EIA Sbjct: 118 VRRAALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATT 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L T+ + SAM K G N + L+ + + Sbjct: 178 LFLEPSTVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 12/224 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + IADDH ++ G+ L VVGE D+ + L VL+ D+ G Sbjct: 4 KRTRIAIADDHGLMRQGLAAILAADPRFEVVGEAADAAGAVGLARDLAPDVLLLDV---G 60 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G G+ + + P ++++TM+ +++A G V+K A T L A+ Sbjct: 61 LAGGSGVDVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIE 120 Query: 122 ALQKGKKFTPESVSRLL---------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A+ +G+++ +++ + K L+ +E ++LRL AEG V IA Sbjct: 121 AVLRGERYLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIA 180 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 +L S KT+ + + + KLG+ N L+ Y + + + D D Sbjct: 181 TELFISKKTVENHRANICGKLGLANLAELVRYAARLGIVDLDDD 224 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD----AHVLITDLSMP 60 V++ DDH +V G+R L + VVGE +D A + L + ++ITD+ M Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMR 175 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI L + +P L++++++M++N + + G VLK +L A+ Sbjct: 176 G---MGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAI 232 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G+ F ++R + + L+P+E ++L G +IA +L S++ Sbjct: 233 QAVLAGRVFYSARIARGMAAQAVSPL--DALTPRERDILHGIGRGQANKDIAVQLGVSVR 290 Query: 181 TISSQKKSAMMKLGVENDIALLNYLS-SVTL 210 T+ + + + KLG+E L+ Y + L Sbjct: 291 TVETHRLNLKRKLGIEGRAELVKYAVQQLGL 321 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 14/220 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADD +V G R L + + VVGE D + + A V++ D+ MP Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMP- 77 Query: 62 DKYGDGITLIKYIK----RHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 DG+ + + P +I+LT + L L G +LK +P DL Sbjct: 78 --KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLI 134 Query: 118 KALAALQKGKKFTPESV-SRLLEKISAGG-----YGDKRLSPKESEVLRLFAEGFLVTEI 171 +++ + +G V R++ + SA L+ +E EVL L A+G EI Sbjct: 135 ESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEI 194 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 A++L T+ + + KL + + + + + Sbjct: 195 ARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH + G+R LE+ E + VV E D +++ + V++ DLSMPG Sbjct: 3 IRIILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMPDVVVLDLSMPG-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G I + P + II+L+M+++ + L L ++ +LK+ A +L A+ + Sbjct: 61 -MNGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCV 119 Query: 124 QKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 K + +S ++ G L+P+E + RL G EI +L S K Sbjct: 120 FKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+ + + M KL + N L+N+ + + Sbjct: 180 TVETYRLKVMKKLNISNIAQLVNHAVQEGIVGRPE 214 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 103/220 (46%), Gaps = 22/220 (10%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + ++I DDH + G+++ L VV + ED + + K + V++ D++MP Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ + + + +P + ++VL+++++ + ++ VL G +LK+ L +A+ Sbjct: 67 --KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVK 124 Query: 122 ALQKGKKFT-PESVSRLLEKISAGGYGDKR------------------LSPKESEVLRLF 162 + +G + P+ L+++ D++ L+ +E EVL+L Sbjct: 125 VVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLM 184 Query: 163 AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 +G+ I + L S KT+ + + + K+ V + + Sbjct: 185 TDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAV 224 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 8/216 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M M V++ DDH +V GIR L I V + E + + +++ D++M Sbjct: 1 MEGMRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAM- 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ + I P + +++L+M++ L G +LK A +L A+ Sbjct: 60 --DDMDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAI 117 Query: 121 AALQKGKKFTPESVSR-----LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 AA+ +G + +VSR +L + L+P+++E+L L G EIA++L Sbjct: 118 AAVMRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + S+KT+ + + M +LGV + LL + L Sbjct: 178 DLSVKTVEAHRAQIMERLGVRDIANLLLEAARRGLI 213 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHPI+ G+R L+ E VVG+ D L +++ DL++ GD Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L + + PS +++V T ++ A LD G +LK P +L A+ Sbjct: 62 --DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTA 119 Query: 124 QKGKK-FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G +P SRL++++ A + L+P+E EVL L A G ++ ++L S T+ Sbjct: 120 RDGGSALSPAVASRLMDRMRA---PQESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + KLGV+ A ++ L Sbjct: 177 KTHVNHIFTKLGVDTRAAAVSRAMKEGLI 205 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 230 bits (587), Expect = 3e-59, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 108/208 (51%), Gaps = 4/208 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +N+IIADDH IV+ G++ L + VVGE D + + ++ + D+SMP Sbjct: 6 KLNIIIADDHQIVIDGLKSLLVAHPHIKVVGEASDGEEALKLIENNTVNIAVLDISMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ K IK+ +P + I++LTM++ + + ++ +G +LK + +AL Sbjct: 64 -KMNGVETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALET 122 Query: 123 LQKGKKFT-PESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G+++ + ++ LL+ + + + +E +VLRL +EI+ KLN + T Sbjct: 123 INNGEEYIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANST 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVT 209 + + +++ + K GV++ + L+ Y Sbjct: 183 VETHRRNLIEKTGVKSSLGLVRYAVENG 210 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 9/210 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DDHP + G+ +++ + GE + + + +L+ + + D+SMPG Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGT-- 81 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +G+ LIK + P L I++L+M++ L +G V+K A + L + Sbjct: 82 -NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVG 140 Query: 125 KGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +G+ + S L I+ +LS +E EVLRL GF EIA++L+ S Sbjct: 141 EGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLS 200 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSV 208 +KT+ + + KLG + ++ + Sbjct: 201 VKTVETHRAHIKEKLGFKEAGEMVRFAIDW 230 >UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X598_FLAB3 Length = 226 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 110/221 (49%), Gaps = 11/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I DDH +++ G++ LE + ++ V ++ L + + V++ D++MP Sbjct: 8 DKIRILIVDDHQLMIEGLKSLLEDEDSISFVAGATTMKETLDFLAEHEIDVILMDVNMPD 67 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI + K ++ +P +I LTM+ + +I+S ++ G VLK+ ++ AL Sbjct: 68 S---SGIEITKKVRALYPHPKVIALTMHEDISIISKMIKAGASGYVLKRTNMHEVIDALK 124 Query: 122 ALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + + ++ SV ++ + + A LS +E EVL+L A+ F +I + Sbjct: 125 TVHQNGRYLSTSVQNVIMDNLMLPEDLMDAKDDNKPVLSGRELEVLKLIAKEFSNEQIGE 184 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 +L S +T+ + +++ MK ++ + L+ Y + + D Sbjct: 185 QLFISERTVEAHRRNIFMKTKTKSIVGLIKYAITEGIVSID 225 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 7/213 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V + DDH IV G+R++L + + + VVGE + + +P L HV + D +P Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + + ++ P ++ ++LT ++ L + + G VLK+ DL A+ Sbjct: 93 D---GSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAI 149 Query: 121 AALQKGKKFTPESV-SRLLEKISAGGYGDK---RLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ SV R+LE++ G D L+ +E E+L+L A+G +I +L Sbjct: 150 RTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLG 209 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 S KT+ + S + KLG+ + YL T Sbjct: 210 LSEKTVKNYVSSILEKLGLASRTQAAVYLMKQT 242 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDHPIV G++ L+ ++VV E D + + + V++ DL+MPG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG ++ + +IVLT ++ + G + K P L +A+ Sbjct: 63 S---DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 ++ G+ + + G L+ +E EVL L A G EIAK+L+ + KT Sbjct: 120 SVADGQVIFAREAVTAMTAPAPGPVA--ALTAREREVLALVAAGRSNREIAKQLSVAEKT 177 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + S KLGV + Y + ++ Sbjct: 178 VKTHLSSLFRKLGVADRTQAALYAVTHGMA 207 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 229 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 6/209 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V++ DDH +V G R+ LE + VVGE ED + +L V++ D +MP Sbjct: 5 PISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMP-- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G ++I R P +I++L+M+ + + L+ + G +LK ++ A+ Sbjct: 63 -SMNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQ 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK+ RL G L+ +E EVL+L G EIA L+ S T+ Sbjct: 122 VAAGKQVLD---RRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + M LG+ N L+ Y L Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLV 207 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V GI + L IE + VVG+ + + +L V++ D+ MPG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + + R P + ++V+T+ + ++ G + K ++ +A+ + Sbjct: 62 ---GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQV 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+++ +++ L + LS +E ++ + A V I+ KL S Sbjct: 119 FAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSP 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 KT+++ + KL + +D+ L + A Sbjct: 179 KTVNTYRYRIFEKLSITSDVELALLAVRHGMVDA 212 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 11/199 (5%) Query: 22 SLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSL 81 L+ + +VGE + L V+I D+S+P GI + IK P Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPD---MSGIEATRLIKEAVPET 57 Query: 82 SIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLL--- 138 +I LTM+ + L + ++K+ A DL A+ A+ +G+ +V+R + Sbjct: 58 RVIGLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEG 117 Query: 139 -----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKL 193 + L+P+E E+L L AEG EIA++L S KT+ + + + + KL Sbjct: 118 YVSRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKL 177 Query: 194 GVENDIALLNYLSSVTLSP 212 G+ + L+ Y L Sbjct: 178 GIHDRTELVRYAIRQGLVE 196 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 10/214 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 +N + V+IADDH +V G++ L+ ++V+G E+ + +L+ V + DLSMP Sbjct: 2 LNLVTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ I+ + + LT + P + + LD G VLK + +L A+ Sbjct: 62 ---IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAI 117 Query: 121 AALQKGKKFTPESVSR------LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +GK + +S L S + L+ +E EVL+ G+ EIA Sbjct: 118 ETVMQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADL 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 L S+KT+ + + M KLG+ + L Y + Sbjct: 178 LVISVKTVEKHRSNFMKKLGLRSKAELKAYSEEL 211 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 9/215 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 V+I DDHPIV G + +E + + V GE + I + + ++I D+S+ Sbjct: 7 QKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISL-- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 K G G+ LIK +K F + ++ ++M++ L G V KQ AP L KA+ Sbjct: 65 -KDGSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIY 123 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + KGK + +V+ + + + LS +E EV EG IA+KL Sbjct: 124 QVLKGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKL 183 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 N S KT+ + +++ KL +EN AL + L Sbjct: 184 NLSSKTVETYRENIKHKLNLENATALTRHAIQWVL 218 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 6/211 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH + G+R+ LE VGE + L VL+ D+SM G Sbjct: 2 LRILLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQN 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + + +K P L ++VL+M + + L + K+ AP +L +A+ ++ Sbjct: 62 SLN---ALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSV 118 Query: 124 QKGKKFTPESVSRLLEKISAGG---YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+++ + ++ L AGG +RLSP+E E+ A V+EIA++L S+K Sbjct: 119 LAGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+S+ + + K+ + ++ L+ Y L Sbjct: 179 TVSTYRGRILEKMALRSNAELMQYAVRHGLV 209 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDH ++ G+ + L ++VVGE +D ALI + KL V++ D+SMP Sbjct: 2 TIRVVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ I I I+VL+M+N + A+ D +G +LK+ + L +A+ Sbjct: 60 -RMSGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKK 118 Query: 123 LQKGKKFTPESVSR-LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + K P+ +++ ++ L+ +E EV L G +IA+ L+ S+KT Sbjct: 119 VAANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + + + KL + + L+ L Sbjct: 179 AENHRSNIYKKLNLSSSAELIRMAGKAGL 207 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 229 bits (585), Expect = 5e-59, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 20/222 (9%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDH +V GIR LE + +VGE D I+ L + VL+ D++MP Sbjct: 2 PIRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEAIDLLASIGTDVLLLDITMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI +K I + +P++ ++ +M++NP + + G +LK ++ +A+ Sbjct: 60 -RMSGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAAGYLLKDTGLEEMLRAVRT 118 Query: 123 LQKGKKFTPESVSRLLEKI-----------------SAGGYGDKRLSPKESEVLRLFAEG 165 + G + P + S ++ + S R++ +E +VL +G Sbjct: 119 VVDGDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLIDG 178 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 EIA+K S T+++Q+ S + K GV+N L+ Sbjct: 179 MSSPEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLALE 220 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 109/210 (51%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH ++ G++ LE+ + ++++ T + +L VL+ D++MP Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPN-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI +++ + + + S+I+L+M+++ + + +G VLK +L A+ + Sbjct: 60 -LNGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQV 118 Query: 124 QKGKKFTPESVS-RLLEKIS-AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G+ + S RLLE+I+ A D LS +ES+VL+ A G EIA L+ S++T Sbjct: 119 AQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + KLG + AL+ L Sbjct: 179 VETHRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 5/209 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ ++I DDHP+VL G++ L E V VVG ++ I L + + D+++P Sbjct: 2 SVRILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDI 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L K +K FP + + L+ N A +S ++ G ++K D+ +A+A Sbjct: 62 ---SGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQ 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +Q G F ++ + L+ +E EVL L AEG +IA++L S+ T+ Sbjct: 119 VQAGGYFMNVQFDQVTPATAPKTVPF--LTRREKEVLVLIAEGLTNPQIAEQLFISVTTV 176 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +S +++ ++K V N +L+ + + L Sbjct: 177 NSHRQNLLIKFEVSNTASLIKLAAGLGLI 205 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 18/225 (8%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDHP+ GIR SLE+ + VVGE E+ I +L V++ D+++PG Sbjct: 3 QRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ + + IKR P + +IV+++ + L + + K P DL + + Sbjct: 63 ---LNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIR 119 Query: 122 ALQKGKKFT-------PESVSRLLEKISAGGYGDKR--------LSPKESEVLRLFAEGF 166 + +GK P +R+L + + L+ +E E+L A G Sbjct: 120 EVARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGL 179 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EIA +L+ S +T+ + S + KL V + + Y Sbjct: 180 SNKEIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 9/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIE---WVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 ++V++ DDH +V GIR L++ + VVGE + +L V++ D++MP Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G+ + I PS+ ++VLT + + VL+ G + K ++ A+ Sbjct: 62 GIG---GLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAI 118 Query: 121 AALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G++ +V++ L LS +E ++L + +G IA LN Sbjct: 119 QGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+S+ K M KLG+ ND+ L+ + L Sbjct: 179 SPKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 21/225 (9%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-----LDAHVLITDLS 58 + V+I DDH IV GI++ L + + GE + + + V++ D++ Sbjct: 2 IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP DG+ ++K +K FP L +++L+ + L L G + K + Sbjct: 62 MP---QRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMID 118 Query: 119 ALAALQKGKKFTPESVSRLLEKISAGGYG-------------DKRLSPKESEVLRLFAEG 165 A+ + +GK F SV+ L G G +RLS +E +V L A G Sbjct: 119 AIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAG 178 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 V EIA++L S T+S+ + + K GV ND+ L Y L Sbjct: 179 KSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQEL 223 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ G+ + L Q + + VVGE D ++ + + V++ D+ MP Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ K IK++ PS I++LT ++ + +L+ G +LK ++ A+ Sbjct: 61 ---RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAI 117 Query: 121 AALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 A++ G+ +R L K S +LSP+E E+L+L ++G EIA Sbjct: 118 RAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIAD 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALL 202 KL S++T+ + + K+ + Sbjct: 178 KLTLSMRTVKAHLSNIFNKMRCSCRTEAI 206 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 228 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 7/220 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ DDH + G++K LE ++ GE D + + + V++ D+ MP Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI LI+ ++ + + +T N+ LS + + + G VLK T+L A+ Sbjct: 61 N---LDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAI 117 Query: 121 AALQKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++ +G+ + V+ LL K L+ +E EVL A+G EI+ K+N Sbjct: 118 RSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMN 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KL + + V ++ + ++ Sbjct: 178 LSEKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAESSEE 217 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 228 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 100/212 (47%), Gaps = 5/212 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH +V I + L+ + + V+ E D +N +L +++ D+ MPG Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + I R + ++++T A ++D G + K ++ +A+ A+ Sbjct: 62 ---GLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAI 118 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G+++ +++ +L K+ +LS +E +V + V++I+ +L S KT Sbjct: 119 FDGQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 +++ + KL V++D+ L + L Sbjct: 179 VNTYRYRIFEKLNVQSDVELTHLGLRYGLIDG 210 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 228 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 122/209 (58%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ V+IADDHP+VL G+R L + V++VGE D L+ L ++ITD +MP Sbjct: 2 SVQVLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAATPCDIVITDFAMPEQ 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ ++ I+ +PS+ +IVLTM +NP ++ + ++ K+G +LP+ALAA Sbjct: 62 PAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALAVLSKRGDLDELPRALAA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G+ F G ++LSP+E EV+RL A G +T+IA + RSIKT+ Sbjct: 122 VYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKTV 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+ K +AM KLG+++D+ L Y + L Sbjct: 182 STHKHNAMGKLGLKSDVDLFMYATENGLV 210 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 228 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 9/215 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +IIADDH + L G+R L + + ++V+ + + V++ D++MP Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + IK + I+ L+M+ + +++ +L G LK+G+ +L +A+ + Sbjct: 59 KMNGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIV 118 Query: 124 QKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + ++ +L K +A LS +E EVL L A+G E+A L+ Sbjct: 119 SSGETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S T+ + ++ M KL N L+ + L Sbjct: 179 SKNTVDTHRRRIMEKLDCGNIAELIRFAIREGLID 213 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-LDAHVLITDLSMP 60 + V++ DDH ++ G+ + + V E D + L A +++ D+S+ Sbjct: 4 SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL- 62 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 K G +IK I P+L ++V++M++ L G V+KQ L A+ Sbjct: 63 --KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAI 120 Query: 121 AALQKGKKFTPESV-SRLLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKL 175 + KG + + + ++LL +++ G + L+P E EVL L G EIAK L Sbjct: 121 HEVLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKLL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 +RSIKTI + + + KL +++ L+ Y + Sbjct: 181 SRSIKTIETHRFNIRTKLNLKDGADLIRYATHW 213 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V IADDHP++L G++ L + +VGE D + + LD V + DLSMPG Sbjct: 19 SRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAIDLDPDVAVFDLSMPG 78 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI +I+ + P ++V++++ + A L +L + + G +LK+ A +L + + Sbjct: 79 ---LNGIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATEELVRGIH 135 Query: 122 ALQKGKKFTPESVS-----RLLEKISAGGYG--DKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G + +++ RL + S G LS +E EVL+L A G I+ K Sbjct: 136 AVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHSNKVISAK 195 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 L K++ + K AM KLG + + L+ + S+ + Sbjct: 196 LEVGPKSVETYKARAMEKLGFTSRVDLIRFALSMGWLESTN 236 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 5/214 (2%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +++ DDH IV G R L+Q + VV E D ++ ++I DL+MPG Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPG--- 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ +K I++ P+ I+V TM+ N A + +G V K P L + + Sbjct: 63 LGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVL 122 Query: 125 KGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+ + L +++ L+P+E E+LRL IA L S KT+ Sbjct: 123 QGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTV 182 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 ++ + KLGV +DI L+ + A+ + Sbjct: 183 ANTRYLIKAKLGVASDIELVLVALRQGILGAEGE 216 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 3/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NV + DDH +V G + L + VVG++ + +L K V + D++MP + Sbjct: 11 INVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE- 69 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G++L+ +++ P I+L++ + A + + LD G + K+ P +L +A+ + Sbjct: 70 --SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVV 127 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + + L+P+E E+ L G V IA++L S KT+ Sbjct: 128 SSGGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVH 187 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTL 210 + + + KL E+ + L+++ L Sbjct: 188 VHRANILSKLQCESTVELVHFALQHQL 214 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 6/214 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDHP++ G+R+ LE E + VV E D IN LD +L+ DL+MPG Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I+R ++ I+VLT++++ + VL L + G +LK P L ++ + Sbjct: 60 -VNGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKV 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ +V+ +LL ++ LS +E ++L +G EI + L S K Sbjct: 119 HSGQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + S KL VE+ + L D Sbjct: 179 TVKNHLSSIFRKLAVEDRTQAALKAVKLKLVQLD 212 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 6/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++N+++ DDH IV GIR+ L V E E+ + + K + V++ D+S+P Sbjct: 2 SLNILLVDDHAIVRQGIRQLLIDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLPDT 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI ++K +KR P +++ +M L G + K + A+ Sbjct: 62 ---NGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQ 118 Query: 123 LQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G+K+ +++ L + ++LS +E + L + A G +T+IA L+ S+ Sbjct: 119 VAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+S + + K+ + N+ L Y+ S L Sbjct: 179 KTVSVYRSRLLEKMRLSNNAELTFYVMSNRLVD 211 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 11/219 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DD P+V G+ L VVGE E+ + +L V++ D+ MP Sbjct: 10 RIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMP-- 67 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + P ++ L+ + + L G + K +P DL A+ Sbjct: 68 -VLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRT 126 Query: 123 LQKGK-KFTPESVSRLLEKISAGGYGDK-------RLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ P ++RL+ +G + L+P+E EV RL A G T I++ Sbjct: 127 VHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRT 186 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L+ S+ T+ + S KL V + + L A Sbjct: 187 LDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVTA 225 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 14/221 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V+IADD +V G R +E + VV E D A + +L V++ D+ MP Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMP- 82 Query: 62 DKYGDGITLIKYIKRH--FPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 +G+ + I P I+V+T ++ + L G +LK P +L A Sbjct: 83 --VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 LAALQKGKKFTPESVSRLL----EKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTE 170 + + G V+R L ++ A L+ +E VL A G+ E Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA+ L S+ T+ + + KL + L+ L Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD------AHVLIT 55 + V++ DDH IV G+R LE + + +V E D ++ L + HV++ Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLM 68 Query: 56 DLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTD 115 DL MP DGI + I +P + ++VLT + + A L G VLK P + Sbjct: 69 DLQMP---RLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LPKALAALQKGKKFTPESVSRLL-EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + A+ A KG+ +V+RLL ++++ G L+ +E ++L L +G EIA + Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADR 185 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L S +T + + + KL + + L Sbjct: 186 LVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 8/216 (3%) Query: 1 MNN--MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 M+ + +++ADDH + G+R+ LE+ +VGE ++ L +++ D+ Sbjct: 1 MSTMPIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQ 60 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP DG+ + + + + P + +I+LTM L + +LK +L Sbjct: 61 MP---EIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELID 117 Query: 119 ALAALQKGKKFTPESVS-RLLEKISAGG--YGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + + +G+ +V+ R+ ++ ++L+ +E ++L L AEG IA++L Sbjct: 118 VIERVHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+ ++ KLGV N L Sbjct: 178 FLSEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V IADDH +V GI L + VG + + VL++DLSMPG Sbjct: 19 RPVTVAIADDHHVVRQGIEALLRMCPDMEYVGGASTVDEARQLVHRTRPDVLVSDLSMPG 78 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G G+ ++ ++R P I+VLTM+ + D V K A L + Sbjct: 79 ---GSGVGFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGAHAFVAKDDAFDTLVSIIR 135 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G++F SR +++++ G RL+P+E EVL+ +G EI +L S KT Sbjct: 136 RVHSGEEFL---FSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKT 192 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + M K V L+++ + + P Sbjct: 193 VEVYRGRLMKKFNVTKGTELIHHAVASGIVP 223 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 10/215 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADD + G+ LE E ++VVG+ +D I L V++ D+ MP Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I + FP + I+VLT + + L G +LK + L A+ L Sbjct: 59 ICDGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRML 118 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G +++ +++ ++ + +RLS +E +VL L +G EI++ L+ Sbjct: 119 HDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHL 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + T+ + + LGV + + LSP Sbjct: 179 TEGTVKNYVSQLLGSLGVRDRTQAALWAQQY-LSP 212 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 227 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++ADDH I G+++ + ++VV E D L+N + D ++I D++MP Sbjct: 1 MST-RILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMP 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ ++ +K P L ++V++M+ G + K A +L AL Sbjct: 60 GR---NGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDAL 116 Query: 121 AALQKGKKFTPESVSR-LLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + GKK+ +++ L+ +S D + LS +E +V+ + A G V +IA +L+ Sbjct: 117 HKISMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSL 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S+KT+S+ + + KL ++N+ L ++ L Sbjct: 177 SVKTVSTYRAHILRKLNMKNNAELTRFVIENKLI 210 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 8/217 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ + DDHP+V G ++L + VVG+ + + V++ DL++P Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPD 79 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI L+ ++ P ++VL+ ++ ++ L +G ++K ++ + + Sbjct: 80 R---DGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIR 136 Query: 122 ALQKGKKFTPESVSRLLEKI-----SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G S++ + + S G G L+P+E +VLRL A G E A +L Sbjct: 137 RIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLT 196 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S KT+ + + KLG ++ + L L A Sbjct: 197 ISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIEA 233 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + DDH ++ G++K +E + ++ + L + +L D+S+PG Sbjct: 17 DKKKIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQLEQGKPDMLAVDISLPG 76 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ LIK P L I+V++M++ VL G V+K T L +A+ Sbjct: 77 R---NGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIR 133 Query: 122 ALQKGKKFTPESV-SRLLEKISAGGY-----GDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +G ++ ++ ++++E S G G +RLS +E EV +L +EG +I L Sbjct: 134 NVLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDAL 193 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 N S+KT+ + KL +E+ ++L Y Sbjct: 194 NISVKTVEVHRAHIREKLKLEDGASVLRYAVRW 226 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH ++ G+++ LE + + GE T I+ L +++ D+++P Sbjct: 2 IQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKH 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++K K P L II+L+M L G + KQ A L KA+ + Sbjct: 62 ---GIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHV 118 Query: 124 QKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 GKK+ E ++ L + + LS +E + L L A G ++EI++ + S K Sbjct: 119 LSGKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+S + + K+ N+ ++Y + L Sbjct: 179 TVSVYRSRMLAKMTFTNNAEAIHYAITHRLVELQD 213 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 4/210 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+ DDH +V GI L + VVGE I +L +++ DL M Sbjct: 2 TIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLM--- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + DG+ IK+ P + +++LT + LD ++ +LK + D+ A+ Sbjct: 59 EDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRK 118 Query: 123 LQKGKK-FTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G+ F PE + ++ ++ + L+ +E E+L L A+G+ EIA + +IKT Sbjct: 119 TSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + + KL V++ + Y L Sbjct: 179 VKTHVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 10/213 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + + DDHP++ G+R + + V+GE DS + KL ++I D+S+ G+ Sbjct: 41 KTRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRPDLVIADISLRGN 100 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI LIK +K P + ++V++M + VL V+KQ T + A+ Sbjct: 101 ---SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRR 157 Query: 123 LQKGKKFTPESVS-RLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G+ F E V+ ++L + A LS +E E++ L EG EIA KL Sbjct: 158 ARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKL 217 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 SIKT+ + + KL + N L+ + Sbjct: 218 FLSIKTVETHRVHIKRKLNLANATQLVQFCVRW 250 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA----HVLITDL 57 N + V+I DDH +V G+R L VV E A I+ L V++ DL Sbjct: 5 NTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDL 64 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 MPG DGI + + +P+L II+LT + ++ VLK + +L Sbjct: 65 MMPG---MDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELI 121 Query: 118 KALAALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 AL KG VS+ L + GD+ L+ +E EVL L AEG EI ++ Sbjct: 122 YALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEE 181 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L+ S+KT+ + + +MK +E+ L Sbjct: 182 LHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 19/221 (8%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAH------VLITDLSMP 60 ++ DDH IV GIR LEQ + + ++ E D +++ L L +++ D+S+P Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + I R + ++ +++L+M+NN + ++ G +LK + ++ KA+ Sbjct: 61 G---MSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAI 117 Query: 121 AALQKGKKFTPESVSRLL----------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTE 170 + G+K+ V+ ++ +LS KE E+L+ +G E Sbjct: 118 RTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSRE 177 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA+KL S++T+ + + + M +L V N L+ L Sbjct: 178 IAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVEDKLI 218 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V++ DDH +V G R L + VVGE E V++ DLS+PG Sbjct: 3 SKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I+ S I+V ++++ + L+ G + K AP L +A+A Sbjct: 63 IG---GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVA 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G+ F +++ L + GG LS +E +V L A+G+ E+A++L Sbjct: 120 RIASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRL 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+++ KLGV + + Sbjct: 180 GYKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 8/216 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++++++I +D ++ G+R L+ E + VVGE D + +L +++ D+ MP Sbjct: 4 SDISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ I+ I + IIVLT + + + G +LK L + + Sbjct: 63 --VMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIR 120 Query: 122 ALQKGKKFT-PESVSRLLEKISAGGYGDKR----LSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ F PE SR L + + G LS +E EVL L A+G EIA +L+ Sbjct: 121 RVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLS 180 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + T+ + + + KL EN N L+ Sbjct: 181 ITEGTVKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD-AHVLITDLSMP 60 N + V++ DDH ++ G+ + + V+ E D + L K + +++ D+++ Sbjct: 4 NKIKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL- 62 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 K G +IK + P+L ++ ++M++ L G V+KQ L A+ Sbjct: 63 --KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAI 120 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKL 175 + KG + + + L K A G+ + L+P E EVL L +G EIAK L Sbjct: 121 HEVLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 RSIKTI + + + +KL +++ L+ Y + Sbjct: 181 CRSIKTIETHRFNIRVKLHLKDGADLIRYATRW 213 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 11/219 (5%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN+ + ++IADDH I G+ L + + +VG+ + L+ L ++A V++TDL M Sbjct: 1 MNHDIRLVIADDHEIFRDGLALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P DGIT + + + P + II L+M + ++ +L+ +G +LK ++ +A Sbjct: 61 P---LMDGITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEA 117 Query: 120 LAALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 + ++ + F S L + + +E E++RL + F EI Sbjct: 118 INSVYEDHIFYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIG 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 K+ S +T+ + + K+ V+N ++ + L Sbjct: 178 DKIFLSKRTVEGHRTRILEKMNVKNTAGVVVFALKNNLI 216 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 20/225 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDHPI G+ + L E VV + +D +++ L + + +L+ DL MPG Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPG- 80 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ ++ ++ +IVLT +++ + L GIVLKQ A L K++ Sbjct: 81 --LDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRK 138 Query: 123 LQKGKKFTP-----------------ESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEG 165 + G+ + +++ + LS +E E++ L A+G Sbjct: 139 VHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQG 198 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 F E+A+K+ S +T+ + + KLGV + + L Y L Sbjct: 199 FKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 12/220 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 ++I DDHP+ G+R L+ + VVGE + L + + D+S+P Sbjct: 6 RILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPD--- 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G GI L + I+ P L +++++M+ ++A G + K+ + +A+ + Sbjct: 63 GSGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVL 122 Query: 125 KGKKFT----PESVSRLLEKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTEIAKKL 175 G ++ SV R L IS LS +E +V+RL AEG EIA KL Sbjct: 123 SGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKL 182 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S KT+ + + + M KLG+++ +A + + + + L D Sbjct: 183 FVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLIEIDD 222 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 18/223 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++I DDH + +R LE + VVG ED + +L+ +++ DL MP Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPN-- 440 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGIT K IK +P + I+VL+ + ++ +G +LK +L + + + Sbjct: 441 -MDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLV 499 Query: 124 QKGKKFTPESV-SRLLEKISAGGYGD--------------KRLSPKESEVLRLFAEGFLV 168 +G + + ++L+ G D L+ +E E+L++ A+G Sbjct: 500 HRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRY 559 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA KL S T+ + + KLGV N + L Sbjct: 560 KTIASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DDHP+V G+ + + ++V E + + + + + DLS+P Sbjct: 19 KVLLVDDHPVVRDGLAQRIALEPDLSVCAACESVSRALREVTVHHPDLAVVDLSLP---S 75 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G G+ LIK I +P + ++V +M++ L +G V+K +P ++ A+ + Sbjct: 76 GHGLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGAQGYVMKDESPDEVLAAIRKVL 135 Query: 125 KGKKFTPESVSRLLEKISAGGYGDK-------RLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ +S L + +A G + RLS +E EVL +G V IA++L R Sbjct: 136 SGRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRLER 195 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 S KTI + ++ KL +E++ L+ + + Sbjct: 196 SAKTIETYRQRLKEKLNIESNSELIAHAARW 226 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 14/221 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + +++ADD + L G++ L + + +VGE + + +L +++ DL+MP Sbjct: 3 DRIQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ K IK+ P ++++ LT ++ + L G +LK L +A+ Sbjct: 62 --VMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIR 119 Query: 122 ALQKGKKFT-PESVSRLLEKISAGGYGD----------KRLSPKESEVLRLFAEGFLVTE 170 A+ G+ F P S++L + S + LS +E +VL + G E Sbjct: 120 AVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKE 179 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA L+ + T+ + + + KLGV + + L Sbjct: 180 IASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 113/220 (51%), Gaps = 12/220 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + + +ADDH +++ G+ L+ + +VG + + +++ + A +L+ D+SMP Sbjct: 1 MTKIKIHLADDHQVLIDGLTNLLQTVSNFEIVGSSLNGVTVYDDVIQDQADILVLDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI ++K + +I+L+ ++ I+ V+ L +G + K+ A ++ +A+ Sbjct: 61 ---QKDGIEVLKEFNQKGLPCKVIILSSYDDLKIIKEVMKLGAKGYLTKKCAGENMIEAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYG---------DKRLSPKESEVLRLFAEGFLVTEI 171 A+ +G+++ ++V + + + + LSP+E E++ L + EI Sbjct: 118 EAVYEGQEYFSDAVREKIFSMFSQNNPKLNKNVYIENPILSPREIEIVTLICLEYSGKEI 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 ++KL S+ T+ + +K+ M KL ++N I L+ Y L Sbjct: 178 SEKLFISVNTVETHRKNIMKKLNIKNTIGLVKYALKNNLI 217 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 3/205 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDH +V G+R LE ++VVGE D + + + V++ DLSMP Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I P ++VLT ++ + VL G VLK P DL A+ A Sbjct: 59 VMDGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAA 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G+ V+ L + G RLSP+E++VLRL A+G ++A+ L + +T+ Sbjct: 119 ARGEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVK 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSV 208 + ++GV + + + Sbjct: 179 AHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 7/220 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDH + G+R+ LE + + V+GE ED A + + L VL+ D+ MP Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI ++K +K S + +T ++ ++A+ + I+ VLK +L A+ Sbjct: 61 ---KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAI 117 Query: 121 AALQKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++ +G + V+ L + RL+P+E EVL ++G EIA+K+ Sbjct: 118 RSVYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMV 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KL + + + L+ K+ Sbjct: 178 LSEKTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQLSKE 217 >UniRef50_C7PEC4 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC4_CHIPD Length = 207 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 4/208 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +N+I+ADDH + GIR LEQ ++ V G + LI L + + I D+SMP Sbjct: 4 PVNIILADDHTLFADGIRSLLEQTPYITVQGIASNGQVLIEMLQRHQPDLAILDISMP-- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ + K I++ P + I+L+ ++P ++S +G ++K DL + + Sbjct: 62 -VLNGLEVTKIIRKDMPHIRTIILSSYSDPHLISLSRSYGADGYLMKTCNQYDLLQTITR 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G+ P+ + R+ E + + L+ +E E+L L + F +IA L SI T+ Sbjct: 121 VVRGESCFPQ-LPRIQEAEIDHSFREFNLTRRELEILHLINQQFTNQQIATHLYLSIYTV 179 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTL 210 + +K+ M KL +++ AL +L L Sbjct: 180 ETHRKNIMQKLQLKSPAALTRFLLEKGL 207 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 12/219 (5%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DD P++ GIR L V VVGE D + + +L V + D+ MPG Sbjct: 11 TVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPG--- 67 Query: 65 GDGITLIKYIKRHF-PSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I P S++VLTM + + L G+VLK ++L A+ A Sbjct: 68 MDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAA 127 Query: 124 QKGKKFTPESV-SRLLEKISAGGY-------GDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 G SV RL+E+ + G L+ +E +V RL +G E A++L Sbjct: 128 AAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERL 187 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ S +S KLGV + + + Y L Sbjct: 188 TLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVDRT 226 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 9/219 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ DDH ++L GI+ LE V+G ++ ALI +L +++ D+SMP Sbjct: 1 MRKLRILLGDDHAMILSGIKGLLE--GHYEVIGSEKNGRALIETAVRLKPDLVVLDVSMP 58 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI + IK+ P+ +I LTM+ N L L G VLK GA +L A+ Sbjct: 59 ---ILNGIDAAREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAI 115 Query: 121 AALQKGKKFTPE----SVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + KG + V + G L+ ++ +L+L AEG EI + + Sbjct: 116 EEVCKGYIYVGPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAH 175 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S++T+ + M +LG + L + L + Sbjct: 176 ISVRTVEFHRSRLMSRLGAHSVAELTRFAIQEGLIDGET 214 >UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas RepID=Q4KHP5_PSEF5 Length = 220 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 131/214 (61%), Gaps = 4/214 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +I+ADDHPI L G+R LEQ + + +VGE +AL + +++ VL+TD MP Sbjct: 7 NKLRIILADDHPIFLIGLRAVLEQDDSLAIVGEASSPSALAQLMQEIECDVLVTDFMMPA 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 ++ DG+ LI+ ++R P L I+V+TM N+P + ++LDL + G++ K +LP A+A Sbjct: 67 EQQNDGLRLIEQLRRRHPDLPIVVVTMLNHPGLFRSILDLGVTGLLSKASLADELPTAIA 126 Query: 122 ALQKGKKFTPESVSRLLEKISAGGY----GDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 ++ K + +++ + L G +LSP+E EV+RL A G V EIA +LNR Sbjct: 127 RARQHKPYIAQAIKQALSLAGEVGPDRLVSSDQLSPRELEVIRLLAAGHAVGEIAAQLNR 186 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S +T+S+QK SAM KLG+ ++ AL Y+ LS Sbjct: 187 SKQTVSAQKVSAMRKLGLSSEAALYIYVQEHGLS 220 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 21/230 (9%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + I DDH + G+++ + + VV E I + +LI D++MP Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMP 62 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI K + P +++L+++++ + ++ L+ G +LK+ A T+L A+ Sbjct: 63 D---MNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAV 119 Query: 121 AALQKGKKFTPESV--------SRLLE----------KISAGGYGDKRLSPKESEVLRLF 162 A+ K + V RLL+ + + LS +E EVL L Sbjct: 120 RAVAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLL 179 Query: 163 AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 A+G +I+ L S KT+ + S + K+ V + + Sbjct: 180 ADGRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V +ADD P+V G R + + V GE D +I + V++ D+ MP Sbjct: 4 DKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI K I P+ I++LT + + + G +LK P +L A+ Sbjct: 63 --RCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIR 120 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A +G+ + + ++ + + + +E EVL+ A G +IA+K Sbjct: 121 AAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEK 180 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L S T+ + + K ++ + + + Sbjct: 181 LFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V++ADDHP++LFG ++L + + + VV ST L+ L VL+TDL+MPG Sbjct: 3 DPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +YGDG+ LI Y++R+FP L I+VLTM N A+L + +L + +V K + + A+ Sbjct: 63 GQYGDGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQ 122 Query: 122 ALQKGKKFTPESVSRLLE--KISAGGYGDKR-LSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + + ++ SV L+ +++ GG D+ LS +E EV+RLF G + EI+++LNRS Sbjct: 123 HVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRS 182 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 IKTIS+QK +AM KLG+E D L Y S L Sbjct: 183 IKTISTQKNTAMRKLGLERDSELFQYAQSNGL 214 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 9/215 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I +D IV GI+ L+ +VGE D + + K +++ DL++P Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G I+ IKR + ++ LT + +++ L +G +LK + L +A+ Sbjct: 60 -VMEGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQT 118 Query: 123 LQKGKKFTPESVSRLL-EKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+++ +S LL + G D+ LS +E +VL+L AEG +A+KL Sbjct: 119 VLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLC 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+ K + KLG + L+ + L+ Sbjct: 179 ISHKTVEKHKANLKRKLGTASTAELVTFAIEHGLT 213 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N++ +++ DDH +V G+ L Q + VV E +D+ + + + V + D+ MPG Sbjct: 5 NSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI ++ I+ FP +I+LT + + L+ G +LK +L A+ Sbjct: 65 ---ASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVR 121 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G++ P+S LE G RLSP+E E L L A GF EI L + +T Sbjct: 122 KVHAGERCVPQS----LETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERT 177 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + ++ ++KL + ++ L AD Sbjct: 178 AKAHVQAILVKLEAADRAEAVDAAYKRGLLRAD 210 >UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GLU5_9BURK Length = 218 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 7/215 (3%) Query: 1 MNN--MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 MNN + +++ DDH +V G R LE V E E++ + K ++I D+S Sbjct: 1 MNNADLRILLVDDHAVVRAGYRHLLETQGGFKQVREAENAQEAYSTCQKELPGLIICDIS 60 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP G+ L++ + +P + ++ TM+N+ + A +D +G V K P L + Sbjct: 61 MPEPV---GLNLVQRVLGRWPEVKFLMFTMHNSIELARACMDAGAKGYVTKSSRPEVLLR 117 Query: 119 ALAALQKGKKFTPESVSRL--LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ + G+ F +SRL L ++ G LS +E EVL L G +I + L Sbjct: 118 AIGEVLAGRTFISADLSRLMALSRLRDNRGGLDELSSREFEVLCLLVAGQSAEQIGELLF 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KTI + KL V NDI L + L+ Sbjct: 178 LSAKTIHNIHYQIKKKLQVSNDIELTKLAIAWGLT 212 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 6/219 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + + I DDH +V G++ + E + +VGE + +P + V++ D+ + Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G + I P + +++L+ P + A VLK ++ KA+ Sbjct: 61 GIH---GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ +G+ F ++ + + G + LS +E E+L L EG EI ++L Sbjct: 118 KAVMQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFL 177 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KLGV N +++ ++ D Sbjct: 178 SEKTVRNHVSRILDKLGVSNRSQAAAFMARRSVIEKMTD 216 >UniRef50_B4CVL8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVL8_9BACT Length = 217 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 10/220 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ G+R +E +E V GE + + KL +++ D++MP Sbjct: 1 METTKVLIADDHQVMRRGVRAVVELLEGWEVCGEASTGREAVEMVEKLQPQIVVMDVTMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + IK+ P+ I++ T ++ V + +LK L AL Sbjct: 61 ---ELNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAAL 117 Query: 121 AALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 AL K + V +L + D RL+ +E E+++L AEG E+A Sbjct: 118 TALAAHKPYFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVAD 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L S+KT+ + + + M KL ++ L+ Y + A Sbjct: 178 SLGISVKTVETHRAAIMKKLKFKSFSDLVRYAIRNHIISA 217 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 225 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 4/210 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +N+ +++ DDHP+ G+ L Q +V E D + +++ D+ MP Sbjct: 4 SNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G + + P L +++LT++ + L L+L G +LK L +A+ Sbjct: 63 --VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIR 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G++ ++ + I L+ +E +VLR A G IA+++ S Sbjct: 121 QAVAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSEN 180 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + ++ KL ++N + Y + L Sbjct: 181 TVKAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 6/201 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH + G+ L E +++ E D + + L+ + + D++MP Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSLEPDIAVLDITMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI++ + + + I+LTM+++P + + G +LK A +L AL + Sbjct: 59 KLDGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G ++ L+ +E E+L L A G IA+ L SIKT++ Sbjct: 119 AAGGTAISRAIQHA---AIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVN 175 Query: 184 SQKKSAMMKLGVENDIALLNY 204 + + + M KL + + L+ Y Sbjct: 176 NHRTNLMGKLNLHSTAELVRY 196 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 15/220 (6%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DD ++ GI L + + VVG+ + + + LD V++ D+ MP Sbjct: 2 TIRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + P ++I+LT ++ + + G +LK L ++ Sbjct: 60 -VMDGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRT 118 Query: 123 LQKGKKFT-PESVSRLLEKI-----------SAGGYGDKRLSPKESEVLRLFAEGFLVTE 170 + G P+ +++LL ++ S+ L+P+E ++LRL A+G+ E Sbjct: 119 VAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQE 178 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 I ++L S+ T+ + KL V + + L Sbjct: 179 IGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHLL 218 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 7/210 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ADDHPI+ + L+ + V+G D + + V + DL MP Sbjct: 7 NVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G I I F I+VLT + + L +G +LK P +L A+ Sbjct: 66 --KMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIR 123 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + KG+K+ P +++ L A + LS +E EVLRL A+G +I+ LN + T Sbjct: 124 TVHKGQKYIPPTIAAKL----AERMSSEELSDRELEVLRLIAKGKNNQQISNVLNIAEST 179 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + KL V + L + + Sbjct: 180 VRFHTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 10/211 (4%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ DD + G+ L + VVGE D N V++ D+ MP Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMP---KRS 58 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 GI IK PS II+LT+++ A L + G +LK + ++ +A+ + G Sbjct: 59 GIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADG 118 Query: 127 KKFTPESVS-RLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + S++ +L+++ ++ RL+ +E EVLRL A+G EIAK+L S Sbjct: 119 QSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISE 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + ++ + KL + + + + Y L Sbjct: 179 NTVKNHVRNILEKLQLHSRMEAVMYAVKEKL 209 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 225 bits (575), Expect = 8e-58, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 9/214 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M N +V I DDH +V G+ + Q + V G +D + L ++ ++I DLS+ Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADMEVCGSADDGPVALQKLFNIEPDIIIVDLSL- 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ +IK IK +P++ I+VL+M + G V+K P+ + +AL Sbjct: 60 --TTSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGASGYVMKSEKPSVIIEAL 117 Query: 121 AALQKGKKFTPESVSRLLEKIS------AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + KGK + E ++ + + + L+ +E +V ++ GF +IA K Sbjct: 118 RKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIATK 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 LN S+KTI + ++S KLG+++ L Y Sbjct: 178 LNLSVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211 >UniRef50_B1Y741 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y741_LEPCP Length = 205 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 6/206 (2%) Query: 9 ADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGI 68 ADDHP+V +R+ L + VV E D + D + + D SMPG G+ Sbjct: 2 ADDHPVVRQRLRQILMAEPALTVVAEAGDGDEALALARSTDWDLALLDFSMPGC---SGL 58 Query: 69 TLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKK 128 +LI++++R FP ++VL++++ + VL G + K+ A L +A+ A+ G Sbjct: 59 SLIEHVRRDFPQRPVLVLSVHDEQLLAPHVLRAGASGYLCKECATEQLIQAIRAVTAGGT 118 Query: 129 FTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQ 185 V++ L I +GG +RLS +E V+ L + G + EIA++L+ +T++S Sbjct: 119 HVSAPVAQRLAWQVAIESGGAPHERLSDREYRVMWLLSSGRHIVEIAQELHLRPRTVASY 178 Query: 186 KKSAMMKLGVENDIALLNYLSSVTLS 211 + + KLG+ + L++Y L Sbjct: 179 RHRVLRKLGLHDTAELVSYAVRHELV 204 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 9/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ DDH I+ ++K+LE+ V V+ + + K +++I D++MP Sbjct: 4 NPITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPD 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI K I P + II L+M + + +++ +G +LK + DL A+ Sbjct: 64 ---LNGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAIL 120 Query: 122 ALQKGKKFT-PESVSRLLEKISAGGY-----GDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + GK + PE+++ ++E I G +RL+ +E V++L AEG+ EI++KL Sbjct: 121 MVASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 N S +T+ + + M KL + L + L Sbjct: 181 NISKRTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLI 216 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 7/211 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-LDAHVLITDLSMPGD 62 + ++IADDH IV GI+K L + + V E D+ ++ +L + VL+ DLSMPG Sbjct: 2 IRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPGV 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G++LI IK +P+ I++ +M+N I S + G + K P L +A+ Sbjct: 62 T---GMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAAGFIAKDSDPEILLEAIRR 118 Query: 123 LQKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G+ + +++ + + LS +E E+ L G V +IA LN S Sbjct: 119 VAAGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISN 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+S+ K + + K+ + + L++Y L Sbjct: 179 KTVSTHKLNLITKMKLHSTADLVHYALEHKL 209 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 16/224 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH ++ GI++ L + + VVGE ED + L +L+ D++MPG Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + K +K+ + II LT++++ + +L G +LK P L KA+ + Sbjct: 63 ---GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMV 119 Query: 124 QKGKKFTPESVSRLLEKISA-------------GGYGDKRLSPKESEVLRLFAEGFLVTE 170 +G F ++ L S+ +RL+P+E +VL A+G + Sbjct: 120 NEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQD 179 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 I K L S KT+ + S KL V + L Y+ + + Sbjct: 180 IGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSLE 223 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 305 8e-82 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 292 7e-78 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 289 5e-77 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 288 8e-77 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 286 4e-76 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 286 4e-76 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 283 3e-75 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 282 7e-75 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 279 5e-74 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 278 1e-73 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 278 1e-73 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 276 4e-73 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 275 6e-73 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 275 7e-73 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 275 9e-73 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 273 2e-72 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 273 2e-72 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 273 4e-72 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 272 4e-72 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 272 4e-72 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 272 8e-72 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 271 1e-71 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 270 2e-71 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 270 3e-71 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 269 4e-71 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 268 7e-71 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 268 8e-71 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 268 8e-71 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 267 1e-70 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 267 1e-70 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 267 2e-70 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 267 3e-70 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 267 3e-70 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 267 3e-70 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 266 4e-70 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_Q04VJ6 Receiver component of a two-component response r... 266 4e-70 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 266 4e-70 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 266 4e-70 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 266 5e-70 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 265 7e-70 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 265 7e-70 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 265 7e-70 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 265 8e-70 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 265 8e-70 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 265 9e-70 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 264 2e-69 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 263 2e-69 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 263 2e-69 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 262 6e-69 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 262 6e-69 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 262 6e-69 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 262 7e-69 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 262 8e-69 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 262 9e-69 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 262 9e-69 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 260 3e-68 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A3Y699 Putative two component system response regulator... 260 3e-68 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 260 4e-68 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 259 4e-68 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 259 4e-68 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 259 4e-68 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 258 6e-68 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 258 6e-68 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 258 8e-68 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 258 8e-68 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 258 9e-68 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 258 1e-67 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 258 1e-67 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 258 1e-67 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 258 1e-67 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 257 1e-67 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 257 1e-67 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 257 2e-67 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 257 2e-67 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 257 2e-67 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 257 2e-67 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 256 3e-67 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 256 3e-67 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 256 4e-67 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 256 4e-67 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 256 5e-67 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 255 6e-67 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 255 9e-67 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 255 1e-66 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 255 1e-66 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 255 1e-66 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 255 1e-66 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 254 1e-66 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 254 1e-66 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 254 2e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 253 2e-66 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 253 2e-66 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobac... 253 2e-66 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 253 2e-66 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 253 3e-66 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 253 3e-66 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 253 3e-66 UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 253 4e-66 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 252 4e-66 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 252 5e-66 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 252 5e-66 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 252 5e-66 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 252 5e-66 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 252 6e-66 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 252 6e-66 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 252 6e-66 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 252 7e-66 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 252 7e-66 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 252 9e-66 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 252 1e-65 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 251 2e-65 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 250 2e-65 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 250 2e-65 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 250 2e-65 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 250 3e-65 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_C1A730 NarL family two-component response regulator n=1... 250 3e-65 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 250 3e-65 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 249 4e-65 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 249 5e-65 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 249 6e-65 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_B3RA82 Response regulator protein; Response regulator r... 248 7e-65 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 248 8e-65 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 248 8e-65 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 248 9e-65 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 248 9e-65 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 248 9e-65 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 248 1e-64 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C5UZV9 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 247 1e-64 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 247 2e-64 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 247 2e-64 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 247 2e-64 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 247 2e-64 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 247 3e-64 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 246 5e-64 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 246 5e-64 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 245 5e-64 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 245 7e-64 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 245 7e-64 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 245 8e-64 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 245 9e-64 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 245 9e-64 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 245 9e-64 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 245 9e-64 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 245 9e-64 Sequences not found previously or not previously below threshold: >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 305 bits (782), Expect = 8e-82, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 11/221 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++A+DH IV G+ L + VVGE E+ I + +L V++ D+SMP Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + +K+ +P + I++L+M++ + L G ++K+ APTDL KA+ Sbjct: 61 ---ELNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAI 117 Query: 121 AALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A G F S+S+ + + +S G LS +E EVL+L AEG EIA Sbjct: 118 HAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L S KT+ + + KLG+ L Y L Sbjct: 178 GHLYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 292 bits (748), Expect = 7e-78, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 9/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + ++IADDH +V GIRK LE + VVGE I + V+I D++MPG Sbjct: 5 EKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI K I++ +P ++I+ LT++++ + +L + G VLK + +L +A+ Sbjct: 65 ---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVY 121 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + +G + V++ + +K L+ +E E+L + G EIA++L Sbjct: 122 QVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIAREL 181 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + K+GV + Y L+ A + Sbjct: 182 FISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGLNDAKLE 222 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 95/226 (42%), Gaps = 19/226 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ DDH + GI++ L+ + VV E D + + + V+I D++MP Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMP-- 93 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + +G+ + + +P +I+L+++++ + + L G +LK+ L +A+ Sbjct: 94 -HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRV 152 Query: 123 LQKGKKFTPESVS-------RLLEKISAGGY---------GDKRLSPKESEVLRLFAEGF 166 + +G + V+ R L GG L+ +E EVL+L A+G Sbjct: 153 VAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGK 212 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 IA L S KT+ + + + KL V + + Sbjct: 213 SNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 288 bits (739), Expect = 8e-77, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ DDHP+V G R+ LE + VVGE E I +L V++ D+SMPG Sbjct: 13 RPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPG 72 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI + IK P + I+VLT ++ A + A+L+ G +LK + +L A+ Sbjct: 73 ---MNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 122 ALQKGKKFTPESVSRLLEKI----SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ G+ +V+R + + + LSP+E EVLR+ A G EIA+ L+ Sbjct: 130 AVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDI 189 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S +T+ + KLGV + + Y Sbjct: 190 SPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWIDPKT 227 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 17/229 (7%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +N++I DDHP+ GIR SLEQ +VGE D + + +L V++ DLS+P Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G+ + + +KR P +I+LTM+ + L + K P L + Sbjct: 61 G---MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVI 117 Query: 121 AALQKGKKFTPESV-------SRLLEKISAGGYGD-------KRLSPKESEVLRLFAEGF 166 + +G+ E V SR+L++ D L+P+E E+L A G+ Sbjct: 118 TRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGY 177 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 EIA+ LN S +T+ + S + KL V + + Y + Sbjct: 178 SNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLED 226 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 286 bits (733), Expect = 4e-76, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 8/220 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH + G+R+ +E + VVGE + + + +L V++ D++MPG Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPG 85 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI + I + + + +++LTM ++ + + ++K P +L +A+ Sbjct: 86 ---MDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIH 142 Query: 122 ALQKGKKFTPESVSRLLEK-----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G ++ +L + ++ + LS +E +LRL A+G+ +IA LN Sbjct: 143 VAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALN 202 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 + T+ + + KLGV + + Y S L P D Sbjct: 203 LAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRPTD 242 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 6/212 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDHP++ G+R LEQ+ VVGE D I + L+ V++ DL MPG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI + + P L ++VLTM+ + A + A L G VLK D A+ Sbjct: 77 VT---GIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVR 133 Query: 122 ALQKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 A+ +G+ +V+R + + L+ +E E+L L A G EIA++L S Sbjct: 134 AVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLS 193 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ + S KL V + + L Sbjct: 194 QKTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 282 bits (722), Expect = 7e-75, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 3/213 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V++ADDH +V GI K LE E + VVGE D + + +++ DL+MP Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GIT IK IK P + +++LT+++ + V+ EG + K P +L +A+ Sbjct: 61 ---RMGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + KG K P S + ++ Y LS +E EVL L A+G +IA++L S K Sbjct: 118 DKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+ + + + KL V + + L Sbjct: 178 TVKNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 10/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +NV+IADDH +V G+++ +E + V+G D + +L V++ D+SMP Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI ++ +K ++ II+LT + + L ++L G VLK L KA+ Sbjct: 69 Q---NGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIR 125 Query: 122 ALQKGKKFTPESVSRLLEK-------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G + +++ L K S + L+ +E EVL L AEG EI Sbjct: 126 DVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDC 185 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L S KT+ + + K+ V + Y + Sbjct: 186 LFISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 10/219 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDH +V G+R LE V+G+ D ++ + V++ D++MP Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +GI + I P +I+ L+M+++ + + L +LK A DL A+ Sbjct: 61 G---LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAV 117 Query: 121 AALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 A+ +GK F ++S++L + + L+ +E EVL+L AEG E+A Sbjct: 118 IAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAA 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 LN S+ T+ + + + + KL + + L+ Y + Sbjct: 178 ILNLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 8/219 (3%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M + +++ DDH + IR LE +NVVGE ++ + ++ D+++ Sbjct: 1 MRKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINL 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG +GI + +K+++P+ ++V TM + L L +G +LK + + A Sbjct: 61 PGK---NGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAA 117 Query: 120 LAALQKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + L +G +++ L ++ + L+ +E E+L +G EIA+ L Sbjct: 118 IRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEAL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S KT+ KL V++ + Y L P D Sbjct: 178 YISDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPLD 216 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 12/220 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V++ADDH + G+ L Q + +V E D + + V++ D+ MP Sbjct: 85 DPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI IK PS II+LT+++ A L + G +LK+ + ++ A+ Sbjct: 145 RT---GIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIR 201 Query: 122 ALQKGKKFTPESVSRLL---------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A+ G+ S++ L + +L+ +E EVLRL A+G +IA Sbjct: 202 AVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIA 261 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 K+L S T+ + ++ + KL + + + + Y L Sbjct: 262 KQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 12/219 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V G L E + VV D + + VLI DLSMP + Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGE 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I FP I++LTM ++ L VL +G +LK L A+ + Sbjct: 61 --SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTV 118 Query: 124 QKGKKFTPESVSRLL----------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 +G+ + ++ L +++S+ K LS +E E+L L A+G+ +IA+ Sbjct: 119 YQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAE 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KL S+KT+ + K M KL +++ L+ Y L Sbjct: 179 KLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLE 217 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 8/216 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V IADDH +V G + + VVGE D + + +++ HVL+ D+SMP + Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I FPS II+LTM L L G VLK + L A+ + Sbjct: 62 --NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKV 119 Query: 124 QKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + ++++ L + A LS +E E+ L A+G+ E A KL Sbjct: 120 ATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFI 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S+KT+ + + KLGV + L++ L Sbjct: 180 SVKTVETHRSKIYAKLGVNSRAELVHLALKYHLLDL 215 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 277 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 11/221 (4%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN + ++IADDH ++ G+RK L ++VVGE + ++ K +++ D++M Sbjct: 1 MNTSIKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P +GI + IK+ P++ II LT+++ L ++ I G VLK P L K Sbjct: 61 P---IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKT 117 Query: 120 LAALQKGKKFTPESV-SRLLEKISAGGYGDKR------LSPKESEVLRLFAEGFLVTEIA 172 + + +G+ F P S+ +R+L + + GD L+ +E EVL+ A+G IA Sbjct: 118 ILGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L S KT+ + + K+GV + Y L Sbjct: 178 NALYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLVDL 218 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 5/213 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDH +VL G LEQ + VV + + + V++ D+SMP Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI + IK P +++LTM++N + V+ G +LK+ + + +A+ Sbjct: 66 --IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIK 123 Query: 122 ALQKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + +G + ES + L ++I LS +E +LR+ A+G +IA LN S Sbjct: 124 TVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISY 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +T+ + +++ KL + + L Y L Sbjct: 184 RTVETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 11/223 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++ DDH + G+R L + V GE ++ + +L V++ D+ M Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMA 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G + I++ P + +I L+M ++ L+ +D+ G +LK L A+ Sbjct: 61 G---MSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAI 117 Query: 121 AALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +Q+G + + L L+ +E E+L++ AEG V EIA Sbjct: 118 REVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIA 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S+KT+ + K + M KL + N L+ Y + + Sbjct: 178 AFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPE 220 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 10/221 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M N+ V++ADDH +V G+R L + + +VGE + KL V++ D++MP Sbjct: 28 MPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMP 87 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G+ + I PS ++VL+ + + + G ++K A DL A+ Sbjct: 88 ---LMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 AALQKGKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAK 173 KG F +++ L G L+ +E E L G IA Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + SIKT+ ++ M KL + +L Y + + A+ Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDAN 245 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 275 bits (705), Expect = 6e-73, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 10/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ +DH IV G++ L E + VVGE D A + +L V++ D++MP Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ + I+ + +++L+M + + + G +LK +DL A+ Sbjct: 62 --KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAG-------GYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G F +V+++L + S G L+ +E EVL L EG EIAK Sbjct: 120 EVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKI 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L S+KTI + M KLGV N L+ + L A+ Sbjct: 180 LGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVSAE 219 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++ DDH +V G++ L V VV E D + ++ V++ DL MP Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ + + +P I++LT + + VL+ G +LK + ++ A+ Sbjct: 61 ---KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G+ V + +E L+ +E E+L L A+G+ IA + S+K Sbjct: 118 RKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+ + + + KL V + + Y L + Sbjct: 178 TVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQEDQ 213 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 13/221 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-----LDAHVLITDL 57 +++ADDH +V G+R L+ + VVGE D I + + + + + D+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 +MP G+ + + R +P L I++LTM++N L L G VLK A DL Sbjct: 87 AMP---RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLV 143 Query: 118 KALAALQKGKKFTPES-----VSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +A A +G+ F + LE+ G + L+P+E E+L+L AEG EIA Sbjct: 144 QACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIA 203 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L S+KT+ + + + KLG+++ + L Y L Sbjct: 204 DTLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIEP 244 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + VIIADDH +V G+R LE+ VVGE T + + +L HV++ DLSMPG Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LI+ ++ P+L I+VLTM+ + G + K+ A T+L +AL + Sbjct: 61 --NGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKV 118 Query: 124 QKGKKFTPESVSRLLE--KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G + +++ L + LS +E EV R +G +T+IA L S KT Sbjct: 119 AAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +S+ K M KL + +D AL+ Y L Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 7/212 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ DDH IV G+ L + V+ E D I + + I DL +P Sbjct: 9 TIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLP-- 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ I I+ P I+VLT + + L G +LK DL A+ + Sbjct: 67 -RMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRS 125 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK P V+ L + +G L+ +E +VLRL +G EIA L+ S T+ Sbjct: 126 VHAGKSRIPTVVAERLAERMSGS----ELTARELDVLRLIVQGRSNREIAADLHISEATV 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + + + KLGV + L + Sbjct: 182 KTHINNLLSKLGVSDRTQAATTALQRGLVHLE 213 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 5/209 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ +DH IV G+ L+ E +VGE E+ + + V++ DLSMP Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMP-- 71 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI K IK++ ++ I++L+ + + L+ +G LK+ P L ++ A Sbjct: 72 -KMDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIA 130 Query: 123 LQKGKKFTPESVSRLLEKISA--GGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + +G V+ L SA L+ +E EVL+ A+G EIA +L+ + + Sbjct: 131 IYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVT 209 T+ + + + KL V++ Y Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 10/219 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+R LE+ + VVGE + ++ + V++ DL + Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQL--GA 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + + P + +++L+M ++ ++ L+ G VLK+ +L A+ + Sbjct: 61 GRNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLV 120 Query: 124 QKGKKFTPESVSRLLEK--------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 +G+ + ++R + + A L+ +E EVLRL AEG EIA++L Sbjct: 121 ARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S+KT+ + + + M KLG+ + + L+ Y + D Sbjct: 181 VISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLD 219 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 7/215 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN M V IADDHP+V G+++ L +V GE +I+ + V + D MP Sbjct: 1 MN-MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMP 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI LIK +++ FP ++VL++ VL G + K+ AP DL A+ Sbjct: 60 GKG---GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAI 116 Query: 121 AALQKGKKFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +G +F ++ L RLS +E +++ L A G V EIA++L Sbjct: 117 RKVARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFL 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S TIS+ +K + KL ++++ L+ Y L Sbjct: 177 SPNTISTYRKRILEKLDLKSNAELMRYAIGHQLVD 211 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 10/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDHP+V G+ L +E + +VGE D ++ + +L +++ DL MP Sbjct: 17 KTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP- 75 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ K I+R FP + +++L+++ N + ++ +G VLK T+L +A+ Sbjct: 76 --TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIE 133 Query: 122 ALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 ++ G F +S+++ K+L+ +E+EVL + AEG E+A + Sbjct: 134 SVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASR 193 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + ++T+ + ++ M KL + N L Y + + +K Sbjct: 194 MGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKLEK 234 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 12/223 (5%) Query: 1 MN-NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M+ + V+I +D ++ G+R L+ E V VVGE D + LP V++ D+ M Sbjct: 1 MSGPVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P DGI LI+ + R P ++ I+LT ++ + L G +LK +L A Sbjct: 61 P---RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAA 117 Query: 120 LAALQKGKKFTPESVS--------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 + + +G+ ++ RL + + G LS +E EVLRL A G EI Sbjct: 118 IEKVHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREI 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 A+ L + T+ + S + KLG + Y A Sbjct: 178 ARALYITEGTVKNHISSILRKLGFRDRTQAALYALERGWIEAP 220 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 7/219 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V+I DDH ++ G+R L E + VVGE D + I K+ V++ D+SMP Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ +K + + P L +I+LTM+ + + L G VLK+ A L +A+ Sbjct: 61 ---EMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAV 117 Query: 121 AALQKGKKFTPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ G+ + S+++ L + K LS +E +VL L A G+ EIA++L Sbjct: 118 RAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLV 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S+KT+ + K M KL + L+ + L Sbjct: 178 ISVKTVETYKYRIMEKLNCKKRSDLVKFALDNGLLARKN 216 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 9/213 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NV++ADDH IV G+R LE +NVV E E+ I +L ++I D+SMP Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPD-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + I P + +I L+M+ + + +L+ G +LK A +L A+ + Sbjct: 61 -MNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTV 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYG------DKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + +++ ++ K L+P+E E+L+L AEG +IA L+ Sbjct: 120 LSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHV 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S+KT+ + +++ KLGV + L+ Y L Sbjct: 180 SVKTVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 6/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH +V G+R LE E + VVGE D I +L V++ D+ MPG Sbjct: 7 RVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGT 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI ++ ++ ++++T + L G V K P L A+ + Sbjct: 67 ---DGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRS 123 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G V+ L G R L+ +E EVL A+G EIA+ L S Sbjct: 124 VHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSE 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + + +MKL V + + + Sbjct: 184 KTVKTHVSNILMKLDVADRTQAALWAVRHGIGD 216 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 9/218 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH +V GIR LE++ V +VGE D + + + I D++MPG Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPG- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G I R P +++L+M+ + L G +LK A +L AL A Sbjct: 63 --LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNA 120 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++KG+ + S+S+ + ++ K L+P+ E+++L AEG EIA LN Sbjct: 121 VRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLN 180 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S+KTI + + M +LG+ + ++ Y L AD Sbjct: 181 LSVKTIETHRMHLMARLGLHDVAGVVRYALRTGLISAD 218 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 111/217 (51%), Gaps = 8/217 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH I+ G++ L + E + VV E + ++ ++ V + D+ MP Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + I S ++ L+M + + +S +L + G +LK A T+L +A+ Sbjct: 60 -QMDGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRK 117 Query: 123 LQKGKKFTPESVSRLLEKI----SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+ + S+S ++ K+ + L+P+E E+L L AEG E+A++L+ S Sbjct: 118 VMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 IKT+ + ++ M KL ++N L+ Y + ++ Sbjct: 178 IKTVGTHRQHIMNKLKLKNLADLVKYAIRNGMISINR 214 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 103/223 (46%), Gaps = 15/223 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH + G++K L+ E + V GE ++ +++ + L ++++ D++MP Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDINMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ KY+K P +I LT++ + L ++ G +LK L +A+ Sbjct: 67 --LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAIQ 124 Query: 122 ALQKGKKFTPESVSRLL------------EKISAGGYGDKRLSPKESEVLRLFAEGFLVT 169 + KG F +++ L I + L+ +E E+L L A+G+ Sbjct: 125 EVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTNK 184 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 EI+K+L S KT+ + + + K+ V + + + Sbjct: 185 EISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVVQ 227 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 11/222 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + V++ADDHPIV G+R LE + VVGE + + L V + D+SMPG Sbjct: 4 NKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISMPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ ++ I ++LT++ L VL G V K TDL +A+ Sbjct: 64 ----NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIR 119 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +G+ F ++ +R L + + LS +E EVLRL A G+ EIA + Sbjct: 120 LVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQ 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 L S KT+ + + M KLG L+ + + L + Sbjct: 180 LFLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQAE 221 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 8/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH I+ G+ L + VV E + + + V + D+SMP Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K I P I+VLTM+ + ++ G +LK A +L A+ AL Sbjct: 59 ELNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKAL 118 Query: 124 QKGKKFTPESVSRLLEKISAGG-----YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 GK + + + +L + K L+ +E EV L +G +IA+ L+ S Sbjct: 119 ATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDIS 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +KT + + + KLGV N L+ Y + L Sbjct: 179 VKTAENHRGKVLDKLGVSNTAELVRYAAKHNL 210 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 12/213 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I DD ++ G++ LEQ + VVG+ E+ + + +L V++ D+ MP Sbjct: 7 SPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG T K I + FP++ ++VL+ ++ + L+ + +G +LK ++L A+ Sbjct: 66 --EMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIR 123 Query: 122 ALQKGKKFTPE---------SVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 G + ++ ++ +E EVL L G EIA Sbjct: 124 FGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIA 183 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYL 205 ++L + T+ + S + +L ++N L Y Sbjct: 184 QQLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 10/219 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++++ADDH IV G++ LE VVGE D +N + L VL+TDL M G Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI + + + P ++++L+M N A + L VLK +L +++ Sbjct: 60 -MSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118 Query: 124 QKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 +G ++ +S + + + L+ +E EVL L A+G EIA++L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 S +T+ + + M KL + N LL Y + P + Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPPEN 217 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 6/210 (2%) Query: 1 MN-NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN + V+I DDHP+V GI+ LE + VVG I L V++ DL+M Sbjct: 20 MNGPIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNM 79 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P G++ + I+ P + +++L+M+++P ++ L G VLK P ++ A Sbjct: 80 PDVG---GLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTA 136 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + A+ +G+++ + L S + L+ +E +L A+G E+A+ L+ S+ Sbjct: 137 IDAVMRGEQYLCTGAAGSLSPQSQTSR--EALTGREQTILLELAQGKSNKEVAQALDISV 194 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVT 209 +T+ + +K+ KLG+ + L Y Sbjct: 195 RTVETHRKNIKRKLGISSTAGLTRYALEHG 224 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 22/229 (9%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + ++I DDH + G+++ L VV + ED + + K + V++ D++MP Sbjct: 8 NKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ + + + +P + ++VL+++++ + ++ VL G +LK+ L +A+ Sbjct: 67 --KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVK 124 Query: 122 ALQKGKKFTPESVSRLLEKISAG-------------------GYGDKRLSPKESEVLRLF 162 + +G + V+ L K L+ +E EVL+L Sbjct: 125 VVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLM 184 Query: 163 AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +G+ I + L S KT+ + + + K+ V + + Sbjct: 185 TDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWV 233 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 + + +++ DDH +V G+ SL + +NVVGE ++ + K V++ DL +P Sbjct: 4 LKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLP 63 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G ++R +P +++ T + + + G +LK A +L A+ Sbjct: 64 GA---NGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G++ ++++ L A S +E EVL+L A G EIA L S + Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV----SDREREVLQLIARGKANKEIAAALGISEE 176 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + +K+GV + + L + Sbjct: 177 TVKRHASNLFVKMGVADRAQATSEGIRRGLIQLE 210 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 268 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNL----PKLDAHVLITD 56 M+ + V+I DDH +V G++ L Q V+ E D + L + +++ D Sbjct: 10 MSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMD 69 Query: 57 LSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 L MPG +G K ++ FP + I++LT ++ ++ VLK + +L Sbjct: 70 LMMPG---MNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEEL 126 Query: 117 PKALAALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 AL +G V++ L + D ++ +E EVL L AEG +IA+ Sbjct: 127 IYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAE 186 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +L+ SIKT+ + + +MK +E+ L Y Sbjct: 187 ELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M ++IADDH IV G+R LE+ + + V E+ + K ++I D++MP Sbjct: 1 MPP-RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMP 58 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +G + I + P +I L+M+ + + + + VLK A +L A+ Sbjct: 59 N---MNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAI 115 Query: 121 AALQKGKKFTPESVSRLLEKISAGGY------GDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ +GK + S+++ L R+SP+E EVL+L AEG +IA++ Sbjct: 116 QAVGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAER 175 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L SIKT+ + +++ M KL + + L + L Sbjct: 176 LFVSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVSQ 214 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 14/220 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADD +V G R L + + VVGE D + + A V++ D+ MP Sbjct: 19 RPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMP- 77 Query: 62 DKYGDGITLIKYIK----RHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 DG+ + + P +I+LT + L L G +LK +P DL Sbjct: 78 --KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLI 134 Query: 118 KALAALQKGKKFTPESVSRLLEKISAGGY------GDKRLSPKESEVLRLFAEGFLVTEI 171 +++ + +G V+R + + L+ +E EVL L A+G EI Sbjct: 135 ESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEI 194 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 A++L T+ + + KL + + + + + Sbjct: 195 ARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 268 bits (687), Expect = 8e-71, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 10/219 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V +ADDHPIVL GIR L + +VGE + + + D V + D+SMPG Sbjct: 3 DRIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ L + + P ++VLT++ + A + +L G +LK+ A DL +A+ Sbjct: 63 ---LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G + SV+ A + LSP+E++VLRL A+GF EIA++ Sbjct: 120 AVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARR 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + S+K+I + K A KLG+ ++ Y ++ A Sbjct: 180 FDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWLDA 218 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 9/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I +DH +V G++ + VVGE ++ A I K +++ DLSMP Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ ++ +K+ P + I+V+TM+ + L L +G +LK P +L A+ Sbjct: 63 --KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIR 120 Query: 122 ALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 A+ GK + +S L L+ +E EV +L AEG +IA L Sbjct: 121 AIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLL 180 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+ + + M KL + + + N+ + Sbjct: 181 FISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 8/217 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ DDH + G+R L++ + + VVGE + LP +A V+ D +MP Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G +G + P L +I L+M + S ++ +G ++K ++ +A+ Sbjct: 61 G---MNGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAG-----GYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G + E V R L D+RLS +E E+L G EIA +L Sbjct: 118 ETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADEL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S +T+ + + + K G +N +L+ Y L Sbjct: 178 FISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLVD 214 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 7/209 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH I G+ + + + VV + E+ +I + V + DL MP Sbjct: 6 TIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEV 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + G+ I I S IIVLT ++ + L +G +LK+ P +L A+ Sbjct: 66 E---GVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRT 122 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G K+ P V L + + LS +E EVLR A+G +IA L+ T+ Sbjct: 123 VHRGHKYIPPDVGAKLVQRLSNP----ELSERELEVLRSLAQGMSNADIADALSIGEGTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S + KL V + + + Sbjct: 179 KSHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 10/222 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ +++++ DDH + G+ L VVGE + +L V++ D+ +P Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + IKR P + +++LT+ ++ L + +G ++K +L L Sbjct: 61 GI---DGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQL 117 Query: 121 AALQKGKKFTPESVSRL-------LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 L +G+ ++ LE+ + D LSP+E EVL L A EIA Sbjct: 118 RGLARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAA 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 +L+ S T+ + K+ + KL + + Y + L P K Sbjct: 178 RLSISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIPPPK 219 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 11/216 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH + G+ L + VVGE + I L V + D+ MP Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMP--- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + ++ P+ I++LT++ +L + G VLK +P L + + + Sbjct: 67 VCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQV 126 Query: 124 QKGKKFTPESVS--------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 +G+ P S++ R E L+ +E EVL+ + G EIA+ L Sbjct: 127 YEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARAL 186 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + + + KL + N Y ++ Sbjct: 187 FISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIA 222 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 8/214 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + ++I DDHPIV G+R + + VVGE D + + V++ DL MP Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRMP- 68 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ ++ P++ ++VLT + + + ++ G +LK DL +A+ Sbjct: 69 --TMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVR 126 Query: 122 ALQKGKKFTPESVSRLL-----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A G+ +V++ L ++ L+ +E EVLRL A G E A+KL Sbjct: 127 AAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLF 186 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S T+ + A K GV + A + L Sbjct: 187 ISEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGL 220 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 11/218 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH ++ G++ L + V+GE D I+ + L +++ DL+MP Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ I+ + + L I+VLTM+++ L AVL + +G VLK+ A +L A+ Sbjct: 62 --KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIR 119 Query: 122 ALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + +G+ F +++ + K+LS +E EVLR A G +IA Sbjct: 120 TVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIAD 179 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L+ S+KT+ + K M KL + L+ Y + Sbjct: 180 LLHVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 15/223 (6%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +N+++ DDH IV GI+ +L+ + ++VGE + I + +L V+I D++MP Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI I + +P +++L+M++N + ++ G +LK + KA+ Sbjct: 61 ---EMSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAI 117 Query: 121 AALQKGKKFTPESVSRLLEK------------ISAGGYGDKRLSPKESEVLRLFAEGFLV 168 A+ G K+ ++S +L S + L+ +E +L++ +G Sbjct: 118 TAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNN 177 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EIA L SI+TI + + + M KL V+N + L+ + Sbjct: 178 REIADGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V+I DDH +V G+R L + + VVGE + K V++ D+ MP Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + DGIT +++++ P + +I+LTM ++ + +LD + GIV K +++ A+ Sbjct: 61 --QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAI 118 Query: 121 AALQKGKKFTPESVSRLL-EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 Q G + + + + +RLSP+E+EVL L A+G+ E+A L+ S+ Sbjct: 119 QHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 KT+ + ++ M ++G+ + AL+ Y L Sbjct: 179 KTVETHRQHIMRRIGLHSRAALVRYAYQNGLVDPP 213 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH IV G+R+ +E E + V+ E + I+ + V + D+SMPG Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ + P L +++LTM+ + ++ G + K+ AP L A+ L Sbjct: 61 --DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKL 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G +F E + LL + S GG LS +E +VLR A G EIA + S+ Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + + + KL + N+ + + L Sbjct: 179 KTVDTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 6/215 (2%) Query: 1 MN-NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M+ N+ +++ DDH +V G+R+ LEQ + V V+ E + + V++ D+SM Sbjct: 1 MSVNIRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG G+ ++ I +P +I+ +M+ N A S L V K GA DL +A Sbjct: 61 PG---MGGLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQA 117 Query: 120 LAALQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + + +GK + +++ L+ +S + LS +E EV RL A G V EI+ L Sbjct: 118 VREVAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKI 177 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S KT+++ + KLG+ + I L+ + Sbjct: 178 SQKTVANYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ LE + V+GE D + + +L V++ DL M G Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI K I R IIVLT + + V++ +LK ++ A+ A Sbjct: 60 -MDGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAA 118 Query: 124 QKGKKFTPESVS----RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 KG+ V+ L + L+ +E E+L L AEG EI ++L +I Sbjct: 119 SKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITI 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + + + KL V + Y L Sbjct: 179 KTVKTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 3/210 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L + VVGE + + +L V++ DL MP Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMP--- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG++ I++ P + ++ LT + + A++ + G +LK DL A+ A Sbjct: 60 VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAA 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G+ + L G ++L+ +E+EVL + A G EIA+ L +T+ Sbjct: 120 AAGQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQTVK 179 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + + KLGV + Y L PA Sbjct: 180 TYVSHILTKLGVHSRTQAAVYAVQSGLVPA 209 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 7/209 (3%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 +++ DDH ++ G+R LE + VVGE EDS I L +++ DLS+ Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSL---TNS 60 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 G+ I+ ++ P I+VLTM+++ + L G VLK+ A +L A+ A+ + Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLR 120 Query: 126 GKKFTPESVSRLLEK----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G+ + +++R L + + LS +E EVL L A G+ EIA +LN S KT Sbjct: 121 GELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKT 180 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + + + M KLG+ + AL+ + L Sbjct: 181 VETYRTRGMEKLGLRSRAALVQFALDHNL 209 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 10/220 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN + V++ DDH I+ G++ L + VV E + I +L V++ DL+MP Sbjct: 11 MN-IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMP 69 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI I+ I P + +VL+M + A + G +LK A +L A+ Sbjct: 70 ---EMNGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAI 126 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + ++ L+ + G +LS +E EVL+L A G EIA Sbjct: 127 HTVASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFT 186 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 SIKT++ Q+ S M KL + N L Y L+ + Sbjct: 187 FGVSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGLTSIE 226 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 9/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++V++ DDH + +R LE + V+GE D + + V++ D+SMPG Sbjct: 21 KAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPG 80 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+T + +K P+ II+LTM + + + +LK + + A+ Sbjct: 81 ---VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIR 137 Query: 122 ALQKGKKFTPESVS-RLLEKIS-----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 A+ +G+ ++ +LL + L+ +E ++LRL A G EIA +L Sbjct: 138 AVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAEL 197 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + + T+ ++ KL V++ Y S L Sbjct: 198 SLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLITRKD 237 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 5/213 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDH +V GIR L ++ + VVGE + + +L VL+ D+SMP Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ +++ FP +++++L++ +N + V+ G +LK + ++ A++ Sbjct: 62 --VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAIS 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 ++ G + +V L + + L+ +E +VL A+G E+AK L S+ Sbjct: 120 SVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISV 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +T+ S + + K+G +N L + L Sbjct: 180 RTVESHRLNLREKVGNKNAAQLYKVAQDLGLLD 212 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 3/214 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDH +V G+R L + VVGE + + +L V+I DL MP Sbjct: 8 RPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMP- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI + ++R P +I LT ++ +D G +LK + L A+ Sbjct: 67 --VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 A +G+ +R L + + L+PKE VL+L A G+ +IA+ + T Sbjct: 125 AAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEAT 184 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + + + KLG+E+ Y L+ ++ Sbjct: 185 VKTHVSRLLGKLGLESRTQAALYALRHGLARLEE 218 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 9/214 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDHP+ G+R LE + V VVGE E + +L V++ DL MPG Sbjct: 8 EAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPG 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+GI + I R P + ++VLTM + + A + G +LK+ ++ +A+ Sbjct: 67 ---GNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVR 123 Query: 122 ALQKGKKFTPESVSRLLEK-----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 A+ G+ ++R + L+ +E EVL+L A+G EIA+ L Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S KT+ + + MKL V + + L Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 18/226 (7%) Query: 1 MNNM--NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLS 58 M + + DDH I+ G++ L + GE D+ ++ + KL+ ++ITD+S Sbjct: 1 MKPTNTKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDIS 58 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MPG GI L+K +++ +P++ I+L+ ++N + +L+L I G VLK A DL + Sbjct: 59 MPG---LSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLR 115 Query: 119 ALAALQKGKKFTPESV-SRLLEKISAGGYGDKR----------LSPKESEVLRLFAEGFL 167 A+ A+ KG+ + + + L G + LS +E E+L+L AEG Sbjct: 116 AIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNS 175 Query: 168 VTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 I K L S T+ + + M KL + L+ Y L + Sbjct: 176 NESIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIES 221 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 14/220 (6%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADD IV GI L + + VVG +D + + + V++ DL MP D Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMP---RCD 58 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I++ P ++VLT + L L G + K ++ +A+ A+ G Sbjct: 59 GVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSG 118 Query: 127 KKFTPESVSRLLEKISAGGYG-----------DKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + V R L + G L+P+E+EVL L AEG EIA+ L Sbjct: 119 EAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARAL 178 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + S T+ + + K G + + Y L+ + Sbjct: 179 HVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPR 218 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 8/214 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+IADDH +V G+R L+ + VVGE + ++ + V++ D++MP + Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ ++ P +++L+M++ + + + G +LK A +L A+ A Sbjct: 70 ---SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRA 126 Query: 123 LQKGKKFTPESVSRLLEKIS-----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G F +V R L A L+P+E +VL A G IA +L Sbjct: 127 VHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGI 186 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S +T+ + ++S M KL + + L + + Sbjct: 187 SRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 9/217 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH IV GIR LE+ ++VV E ++ L HV++ D++MPG Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + P + +++L+M+ + +S G +LK A +L +A+ + Sbjct: 60 -LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQV 118 Query: 124 QKGKKFTPESVSRLLEK------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + + ++ + + L+P+E EVL+L AEG A +LN Sbjct: 119 ACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 ++KT+ + ++ M KL + + L Y L + Sbjct: 179 NVKTVDTHRQQIMKKLKMRSVAELTKYAIREGLISME 215 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 10/213 (4%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 +IIA+DH ++ G++ L+ + + V GE D ++ + +++ D+SMP Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMP---RM 63 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 DG+ + IK+ P + ++VLT++ + A L +G VLK + + A+ ++ Sbjct: 64 DGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLG 123 Query: 126 GKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 GK + VS + + + + L+P+E E+ +L AEG+ EIA+ L S Sbjct: 124 GKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVS 183 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +KT+ + + M KLGV + L + Sbjct: 184 VKTVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 9/216 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH IV G+R L + + VVGE + + +L +++ D+ MP Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMP--- 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI I+ I+ II LT L + G +LK P +L +A+ + Sbjct: 62 VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRV 121 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD------KRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G+ ++R + + D L+P+E + L+L A+G IA+++ Sbjct: 122 HRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFV 181 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S T+ + S + KL + N + Y ++ Sbjct: 182 SEATVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 3/212 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + V + DDH IV G+ L + VVGE + + + A V++ D+ MP Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + +KR P II+L+ + A + L + K+ P L +A+ Sbjct: 61 GG--IDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAI 118 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 GK ++ + + + L+ +E EVL+L AEG EIA +L S + Sbjct: 119 RGAMAGKAVLAPALMQRILEAQTSKAA-DTLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T+ + S + KLG+ + Y L Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 11/219 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DD P+V G+ L VVGE E+ + +L V++ D+ MP Sbjct: 10 RIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMP-- 67 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + P ++ L+ + + L G + K +P DL A+ Sbjct: 68 -VLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRT 126 Query: 123 LQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + L G L+P+E EV RL A G T I++ Sbjct: 127 VHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRT 186 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L+ S+ T+ + S KL V + + L A Sbjct: 187 LDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVTA 225 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 3/209 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V I DDHP+V G++ L + + +VG +D + +N +L V++ D+SMP Sbjct: 8 PVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILMDISMP-- 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I P +++L+M++NP + + + G +LK ++ A+ A Sbjct: 66 -TMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYYAIKA 124 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK S+++LL ++L+ +E VL A+G EIAK LN S +T+ Sbjct: 125 VANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + +++ KLG+ + L++Y + Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADDH ++ G+ L E +VV E D + K + + DLSMP Sbjct: 6 EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMP- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 + G+ ++ +K P++ +++LTM++ + L G + K +L +AL Sbjct: 65 --HMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALR 122 Query: 122 ALQKGKKFTPESVSRLLEKIS-AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G ++ E + LL + LS +E EVL L G+ ++ IA KL SIK Sbjct: 123 TVAAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIK 182 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+S+ K + KL + L++Y + Sbjct: 183 TVSTYKTRLLQKLDCTQNSELVDYALRHNI 212 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 9/212 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V G+R + + VVGE + + + +++ DLSMP Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMP--- 57 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI IK + FP +IIVLT ++ + L + LK P +L K + Sbjct: 58 EMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQV 116 Query: 124 QKGKKFTPESVS-RLLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G+ ++ +L + +K +L+ +E +VL A G EIA L S Sbjct: 117 HGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFIS 176 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ + + + KL V + + L Sbjct: 177 EKTVKTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 5/212 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ + VV E E + V + DLSMPG Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPG-- 63 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + + +++ +M+ N A L G V K G+ +L KA+ + Sbjct: 64 -MGGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEV 122 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +GK + S+++ L+ + G +LSP+E EV RLFAEG EIA+ L S KT Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 +++ KLG+ N + ++ + L + Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFAIKHGLIDS 214 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 8/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + V++ DD IV +G++ + + +VGE A I L V++ D++MP Sbjct: 6 NPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDINMP- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+T + I R P +++LT ++ L + G +LK P D +++ Sbjct: 65 --QMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSIQ 122 Query: 122 ALQKGKKFTPESVSRLLEKISAGG-----YGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 KG + + L ++ + ++P+E +VL+L A G EI++ L+ Sbjct: 123 QAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETLH 182 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 + KT+ + S + ++GV++ L + +S Sbjct: 183 ITEKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHP+V G+ LE E + VVGE D + L V++ DL+MPG Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGT- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ I+ IKR P+ ++VLT + + + G +LK D+ +A+ + Sbjct: 61 --DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVV 118 Query: 124 QKGKKFTPESVSRLLEKIS----AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G V+ L G ++ L+ +E +VL L A G EIA +L+ + Sbjct: 119 YRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITE 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +T+ + KL V ++ L Sbjct: 179 RTVKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 10/218 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V +ADD P+V G R + + V GE D +I + V++ D+ MP Sbjct: 4 DKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI K I P+ I++LT + + + G +LK P +L A+ Sbjct: 63 --RCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIR 120 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A +G+ + + ++ + + + +E EVL+ A G +IA+K Sbjct: 121 AAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEK 180 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L S T+ + + K ++ + + + Sbjct: 181 LFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIVQ 218 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 14/221 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + +++ADD + L G++ L + + +VGE + + +L +++ DL+MP Sbjct: 3 DRIQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMP- 61 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG+ K IK+ P ++++ LT ++ + L G +LK L +A+ Sbjct: 62 --VMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIR 119 Query: 122 ALQKGKKFTPESVS-RLLEKISAGGYGD----------KRLSPKESEVLRLFAEGFLVTE 170 A+ G+ F S++ ++L + S + LS +E +VL + G E Sbjct: 120 AVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKE 179 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA L+ + T+ + + + KLGV + + L Sbjct: 180 IASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 3/208 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP+V G+ L + VG+ D +N + + V++ DL +P Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++++ + P+ +VLT + + L+ G +LK +P ++ +A+ ++ Sbjct: 59 QLSGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSI 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G ++ + K A + LS +E +VL+L G IA LN S TI Sbjct: 119 YEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIK 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KL V + + L Sbjct: 179 SHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 11/217 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ DDHP+ G++ L +V+ E +D + I + + ++I D+SMPG Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + IKR P + I++LTM + A L LD G VLK+ T+L A+ Sbjct: 61 --LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKL 118 Query: 123 LQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + ++ L + +S LS +E EVL+ A G+ EI+ + Sbjct: 119 VMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTE 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L SIKT+ + KK M K+G + AL+ Y + Sbjct: 179 LFISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 6/214 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V+IADDH I+ G+++ L + E + VV + +++ I V++ D+S+P Sbjct: 5 STIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPD 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI IK+ P +++++L+M+ A L G + KQ A L A+ Sbjct: 65 R---SGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIR 121 Query: 122 ALQKGKKFTPESVSRLLEKISAGG---YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KGKK+ V+ L +GG LS +E + L + A G V+EIA+ L+ S Sbjct: 122 TVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLS 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +KT+S + + KL + ++ L +Y L Sbjct: 182 VKTVSMYRARLLEKLNLRHNAELTHYAIKNNLID 215 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 16/216 (7%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH IVL GI L +VGE + + +L +++ DL+MP Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI IK P + ++VLT + + + L G +LK P L +A+ + Sbjct: 60 -IMDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRS 118 Query: 123 LQKGKKFTPESVSRLLE-------------KISAGGYGDKRLSPKESEVLRLFAEGFLVT 169 KG +SR L + S + L+P+E EVL L +G Sbjct: 119 AYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNK 178 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYL 205 +IA+ L + KT+ + S + KL + + + Sbjct: 179 DIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 9/211 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADD + G+ LE E ++VVG+ +D I L V++ D+ MP Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I + FP + I+VLT + + L G +LK + L A+ L Sbjct: 59 ICDGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRML 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYG------DKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G +++ + +RLS +E +VL L +G EI++ L+ Sbjct: 119 HDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHL 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 + T+ + + LGV + + Sbjct: 179 TEGTVKNYVSQLLGSLGVRDRTQAALWAQQY 209 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 3/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M + I DDHPI G+ L + +VG+ + + +P L +++ D+SMP Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMP--- 57 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + K FP + I++L+M+++ + +VL+ + G LK + ++ AL + Sbjct: 58 EMNGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVI 117 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 G + ++S LL + S + L+ +E VLRL A G E+A++L+ S++TI Sbjct: 118 HNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIE 177 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTL 210 + +++ KL ++ L+ Y L Sbjct: 178 THRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 10/219 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +I+ DDH ++ G R LEQ VVGE I +L V++ DL+MPG Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPG- 68 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + IK P ++++V+T +P + L G VLK + AL Sbjct: 69 --VDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRR 126 Query: 123 LQKGKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 L G+ + ++ L + A + L+ +E EVL L A G EIA++L Sbjct: 127 LLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAREL 186 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S T S ++ + KLGV + + + L Sbjct: 187 VISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEPS 225 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 21/230 (9%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + I DDH + G+++ + + VV E I + +LI D++MP Sbjct: 3 MTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMP 62 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI K + P +++L+++++ + ++ L+ G +LK+ A T+L A+ Sbjct: 63 D---MNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAV 119 Query: 121 AALQKGKKFTPESVS-------RLLEKISAGGYGD-----------KRLSPKESEVLRLF 162 A+ K + V+ R L + G + LS +E EVL L Sbjct: 120 RAVAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLL 179 Query: 163 AEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 A+G +I+ L S KT+ + S + K+ V + + Sbjct: 180 ADGRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 7/210 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ADDHPI+ + L+ + V+G D + + V + DL MP Sbjct: 7 NVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMP- 65 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G I I F I+VLT + + L +G +LK P +L A+ Sbjct: 66 --KMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIR 123 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + KG+K+ P +++ L + + + LS +E EVLRL A+G +I+ LN + T Sbjct: 124 TVHKGQKYIPPTIAAKLAERMSS----EELSDRELEVLRLIAKGKNNQQISNVLNIAEST 179 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + KL V + L + + Sbjct: 180 VRFHTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 8/216 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++++++I +D ++ G+R L+ E + VVGE D + +L +++ D+ MP Sbjct: 4 SDISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ I+ I + IIVLT + + + G +LK L + + Sbjct: 63 --VMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIR 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDK-----RLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ F ++ + +A G LS +E EVL L A+G EIA +L+ Sbjct: 121 RVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRLS 180 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + T+ + + + KL EN N L+ Sbjct: 181 ITEGTVKNHVSNILAKLQAENRTQAANIARREGLTD 216 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 3/212 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH +V G+R L E + VVGE + + +L V++ DL MP Sbjct: 13 TVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMP-- 70 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGIT + ++R P +I LT ++ ++ +LK + L A+ A Sbjct: 71 -VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+ +R L + + L+PKE+ VL+L A G +IA + S T+ Sbjct: 130 AARGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + + KLG+++ Y ++ + Sbjct: 190 KTHVSRLLSKLGLDSRTQAALYALKYGIASLE 221 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V GI + L IE + VVG+ + + +L V++ D+ MPG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + + R P + ++V+T+ + ++ G + K ++ +A+ + Sbjct: 62 ---GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQV 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+++ +++ L + LS +E ++ + A V I+ KL S Sbjct: 119 FAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSP 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 KT+++ + KL + +D+ L + A Sbjct: 179 KTVNTYRYRIFEKLSITSDVELALLAVRHGMVDA 212 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 8/216 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M ++IADDH +V ++ + + + V+G+ D T + +++ DLSMP + Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGE 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ K I FP +I+LTM++ A ++ L +G ++K + L A+ ++ Sbjct: 61 --NGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSV 118 Query: 124 QKGKKFTPESVS------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + L++ A +RLS +E E+L L A G+ EIA++L Sbjct: 119 MGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S KT+ K M KL ++ LL + L Sbjct: 179 SAKTVEVHKSHIMKKLEMKKFSDLLRFCVKEQLIDL 214 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 92/241 (38%), Gaps = 35/241 (14%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DD P++ G R LE + + +VGE D I + ++D V++ D+ MP Sbjct: 6 PIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDVRMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + +I+LT + A L +LK AP++L A+ Sbjct: 64 -VLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAVRV 122 Query: 123 LQKGKKFTPESVSRLLEKI--------------------------------SAGGYGDKR 150 + G V+R L + + Sbjct: 123 VASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLLEA 182 Query: 151 LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L+P+E E+L AEG EIA + S T+ + + + KL + + + + Y L Sbjct: 183 LTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYETGL 242 Query: 211 S 211 Sbjct: 243 V 243 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L+ + VV E D + + HVL+ DL+MPG++ Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQ 73 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + I + P +++VLTM +PA L G VLK+ A +L +A+ Sbjct: 74 S---LPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLA 130 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 ++G+ + + + L+ +E EVLRL A G EIA++L SI+T+ Sbjct: 131 REGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVE 190 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S + K+ + L+ Y L A Sbjct: 191 SHRAHIQQKVRRSSRAELVRYALDHGLMDA 220 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 6/216 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH + G+R+ LE+ +VGE ++ L +++ D+ MP Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMP-- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + + + P + +I+LTM L + +LK +L + Sbjct: 63 -EIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIER 121 Query: 123 LQKGKKFTPESVSRLLEKISAG---GYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + +G+ +V+ + ++L+ +E ++L L AEG IA++L S Sbjct: 122 VHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSE 181 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+ ++ KLGV N L K Sbjct: 182 KTVGNRLSEIFQKLGVSNRTQAALVAVQRGLIAPPK 217 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 7/215 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++ +++ADDH + +R L + + VV E ++ ++ D++MPG Sbjct: 2 SLRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + P+L +I L+ + ++ +L G + K A +L +A+ Sbjct: 61 --MDGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRT 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYG----DKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +G+ + V+ + G RL+ +E +VL+L AEG +I +L+ + Sbjct: 119 VCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIA 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+ +++ M KL + N L Y +SP+ Sbjct: 179 ASTVEVHRRNLMRKLDLHNVAELTRYAIHSGISPS 213 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 6/214 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + + I DDH IV G+R+ L + + VVGE + I+ + + VL+ DLSMPG Sbjct: 29 SMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREAIDLVRVHEIDVLVMDLSMPG 88 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ + ++ P + I++L+ ++ G + K+ P ++ +A+ Sbjct: 89 Q---SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPKEIVEAIR 145 Query: 122 ALQKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G+++ SV+ LL + ++LS +E +V A+G +IAK L+ S Sbjct: 146 TIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLS 205 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +KT+S+ + M K+G+ ++ L Y L Sbjct: 206 VKTVSTYRTRLMEKMGLSSNSDLTYYALKNKLID 239 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 14/221 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V+IADD +V G R +E + VV E D A + +L V++ D+ MP Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMP- 82 Query: 62 DKYGDGITLIKYIKRH--FPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 +G+ + I P I+V+T ++ + L G +LK P +L A Sbjct: 83 --VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 LAALQKGKKFTPESVSRLL----EKISAGGYGD-----KRLSPKESEVLRLFAEGFLVTE 170 + + G V+R L ++ A L+ +E VL A G+ E Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA+ L S+ T+ + + KL + L+ L Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 4/211 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDHP VL G++ L E + +VG + I + KL+ V + DL +PG Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + + IK+ P +I+L+ N + +D V+K P L +A+ A Sbjct: 60 -LNGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAA 118 Query: 124 QKGKKFTPESVSR-LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 ++G+ V++ ++++ + G + L+P+E EVL G +IAK L S T+ Sbjct: 119 RRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + + + KL V++ + L Sbjct: 179 KTHVSNILKKLDVKDRTQAVIKAIENNLVDR 209 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 84/218 (38%), Gaps = 10/218 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++I DD +V G+ L + V+ + + +++ DL MP Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + I P + I+VLT ++ L + G +LK A +DL A+ Sbjct: 59 IMNGIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGT 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK-------RLSPKESEVLRLFAEGFLVTEIAKKLN 176 GK + +V+ L A RL+ +E VL L A G IA++L Sbjct: 119 VSGKAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLR 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S T+ + + + KL V + L D Sbjct: 179 LSEGTVRNHVSTILSKLDVADRTQAALLAVEHGLHQRD 216 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH +V GIR+ LE ++ VVGE + K +++ D+SMPG Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ K I R + +IVL+++ I + V+ + G + K P ++ A+ + Sbjct: 62 ---GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKV 118 Query: 124 QKGKKFTPESVSRLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+K+ +++ + + + G + LS +E E+ + +G V +IAK LN S K Sbjct: 119 AAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+++ + KL V D+ L + L ++ Sbjct: 179 TVNTHRYRMFEKLNVSTDVELTHLALRHKLINSEN 213 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 3/208 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH I G+ L + + +VGE + + L+ V + D+SMPG Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K + +++LTM+++P + G V+K A ++L A+ A+ Sbjct: 60 -LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK+F E V+ + ++ +LSP+E EV+RL A+G EIA+ L S KT+ Sbjct: 119 AAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVD 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + M KL + ++ Y + L Sbjct: 179 THRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 10/220 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + V++ADDH + L G+R+ L + + + + G D + +L V + D++MP Sbjct: 1 MS-IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMP 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI + I P ++VL+M+ + ++ L G VLK+ + +L A+ Sbjct: 60 ---RLNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAI 116 Query: 121 AALQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ + ++ L + D LS +E +VL+L +G +IA++ Sbjct: 117 QTVANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQ 176 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L+ S T+ + ++ + KLG + L Y Sbjct: 177 LSISKNTVDTHRRHILDKLGCNSMAELTRYAIREGYLDLS 216 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 7/211 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDHP + G+ + ++VV E D I L V++ DL MPG Sbjct: 19 TIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPG- 77 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ I I++ P +IVL+ + + L + +LK ++ + A Sbjct: 78 --MGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRA 135 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G P SV+ L + + ++L+ +E +VL +G EIA L S T+ Sbjct: 136 VYAGDTSLPRSVAERLTERAQR----EQLTERERDVLESLIKGRSNKEIASSLCISEDTV 191 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S K+ KL V + + Sbjct: 192 KSHLKTLFAKLRVRDRTGAAIEAIRHGIVHL 222 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 13/220 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + ++I DD +V G+ L+ + VV E + I K +++ D+ MP Sbjct: 1 MS-IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMP 59 Query: 61 GDKYGDGITLIKYIK-RHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 DG++ I I++L+ + + L G +LK P +L A Sbjct: 60 ---EMDGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAA 116 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGD--------KRLSPKESEVLRLFAEGFLVTEI 171 + + +G S+++ L A RL+ +E E+L+ A GF +EI Sbjct: 117 VHVVAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEI 176 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 A +L T+ + S + KL + + + + + Sbjct: 177 ASRLFIGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVI 216 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 7/212 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDH + +R LE+ + +VGE + LI+ + + D+ MPG Sbjct: 2 TIRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + + P + +I L+ ++ + +L+ G V K A +L +A+ Sbjct: 61 --MNGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHT 118 Query: 123 LQKGKKFTPESVSR----LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +Q+ K + V+ L + R++ +E +VL+L AEG+ T IA +L+ + Sbjct: 119 VQQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLA 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ +++ M KL + + L Y + Sbjct: 179 PSTVEVHRRNIMRKLDLHSVAELTKYAIRSGI 210 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 10/213 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N+++ DDH ++ GIR LE ++VVGE D + + +L V++ D+ MP Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ ++R P +++LT + +++ L ++G +LK L A+ + Sbjct: 59 RMTGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRV 118 Query: 124 QKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ P V+ +++ + L+ +E EV+RL A G EIA L Sbjct: 119 ANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLG 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 + T+ +Q + + KLGV + + + Sbjct: 179 TAEGTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 4/213 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++ADDH I+ G+R + + VVGE T ++ + + VL DLSMP Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G T I + + P ++VLTM+N+PA + + L G LK DL A+ Sbjct: 61 GWGSA---TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G + ++ +L +LS +E+EVL L +G EIA +L S+K Sbjct: 118 RAVATGARVIDPALGDVL-GGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVK 176 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+ + + K G++ + Y L A Sbjct: 177 TVETYRARLREKTGLKTRADYVRYGLEAGLLGA 209 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 10/215 (4%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ DD + G+ L + VVGE D N V++ D+ MP Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKR---S 58 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 GI IK PS II+LT+++ A L + G +LK + ++ +A+ + G Sbjct: 59 GIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADG 118 Query: 127 KKFTPESVS-------RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + S++ + + + RL+ +E EVLRL A+G EIAK+L S Sbjct: 119 QSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISE 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + ++ + KL + + + + Y L Sbjct: 179 NTVKNHVRNILEKLQLHSRMEAVMYAVKEKLLELP 213 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 10/220 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD------AHVLIT 55 + V++ DDH IV G+R LE + + +V E D ++ L + HV++ Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLM 68 Query: 56 DLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTD 115 DL MP DGI + I +P + ++VLT + + A L G VLK P + Sbjct: 69 DLQMP---RLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LPKALAALQKGKKFTPESVSRLLEKISAGGY-GDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + A+ A KG+ +V+RLL + A G L+ +E ++L L +G EIA + Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIADR 185 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 L S +T + + + KL + + L Sbjct: 186 LVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVSPP 225 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 258 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 10/222 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ G+ + L Q + + VVGE D ++ + + V++ D+ MP Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ K IK++ PS I++LT ++ + +L+ G +LK ++ A+ Sbjct: 61 ---RLTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAI 117 Query: 121 AALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 A++ G+ +R L + S +LSP+E E+L+L ++G EIA Sbjct: 118 RAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIAD 177 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KL S++T+ + + K+ + + Sbjct: 178 KLTLSMRTVKAHLSNIFNKMRCSCRTEAIVKGFREGYVMLED 219 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA----HVLITDL 57 N + V+I DDH +V G+R L VV E A I+ L V++ DL Sbjct: 5 NTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDL 64 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 MPG DGI + + +P+L II+LT + ++ VLK + +L Sbjct: 65 MMPG---MDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELI 121 Query: 118 KALAALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 AL KG VS+ L + GD+ L+ +E EVL L AEG EI ++ Sbjct: 122 YALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEE 181 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L+ S+KT+ + + +MK +E+ L Sbjct: 182 LHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 95/241 (39%), Gaps = 30/241 (12%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + + DD P++ G + E ++VV + D +++ + +++ D+ M Sbjct: 9 EPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDIILMDVQM-- 66 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI + + FP +I+LT ++ + + G +LK P +L A+ Sbjct: 67 -ARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEELLSAIR 125 Query: 122 ALQKGKKFTPESVSRLLEKISAGG---------------------------YGDKRLSPK 154 + G+ ++ + + L+P+ Sbjct: 126 TVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSAELTPR 185 Query: 155 ESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 E ++LRL A G+ TEI+++ S+ T+ + + + K G + + + Y + + + Sbjct: 186 EMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHGVVTVE 245 Query: 215 K 215 + Sbjct: 246 E 246 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 4/211 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+ DDH +V GI L + VVGE I +L +++ DL M Sbjct: 2 TIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLM--- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + DG+ IK+ P + +++LT + LD ++ +LK + D+ A+ Sbjct: 59 EDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRK 118 Query: 123 LQKGKKFTPESVSRLLE-KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G+ V + ++ + L+ +E E+L L A+G+ EIA + +IKT Sbjct: 119 TSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + + + KL V++ + Y L Sbjct: 179 VKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ 209 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 12/223 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+I DDHP+ G++ +E+ VGE + +L ++ D+S+P Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI +++ I P I++L+M ++ +G V+K+ L + Sbjct: 61 D---MSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGF 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR---------LSPKESEVLRLFAEGFLVTEI 171 AL +G+ F VS+ L A G + L+P+E +VLRL AEG +I Sbjct: 118 DALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQI 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 A + S KT+ + + + M KL V + + L+ Y + + L + Sbjct: 178 AAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLIDVE 220 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R L+ V GE DS I + A VL+ DLSMPG Sbjct: 69 IKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGR- 127 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ LIK IK P+L I+VLTM+ G + K+ A ++L A+ + Sbjct: 128 --NGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKV 185 Query: 124 QKGKKFTPESVSRLLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G + +++ + RLS +E +V R A G +T+IA +L S K Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+S+ K + K+ + ++ AL+ Y L + Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYALRHKLIDDPDE 281 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 11/215 (5%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDH +V G+R +E V GE + + +L V++ D++MP + Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMP---ELN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I+ P II+LT++++ +L LD G VLK+ A L A+ AL K Sbjct: 58 GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKH 117 Query: 127 KKFTPESVSRLLEKISAGGYGD--------KRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + P + +A L+ +E EVLRL A+G E+A +L+ S Sbjct: 118 APYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 KT+ + + + M KLG + + L++Y + Sbjct: 178 AKTVETHRANVMRKLGASSIVDLVHYAIRNGIVEP 212 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 10/216 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 +++ADDH IV G+R LE + E D A + L ++I DLSMP Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ + I H P +++LTM+ + L + G +LK A DL A+ A Sbjct: 64 -ELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDA 122 Query: 123 LQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 L +G+ F ++ + L+P+E E+L+L AEG ++ K L Sbjct: 123 LIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKAL 182 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 N S+KT + + M KLG+++ L+ Y L Sbjct: 183 NISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 10/218 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V++ DDH ++ G+ L + + V G+ + ++ + V++ DLS+P Sbjct: 2 TISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 + G +IK +K S ++ LTM+ + A V++ +G +LK+ A +L A+ + Sbjct: 62 Q---GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRS 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDK------RLSPKESEVLRLFAEGFLVTEIAKKLN 176 + +G+ ++ ++LL LS +E EVL+L A G+ EIA+KL Sbjct: 118 VYQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLY 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 SIKT+ + KLG+ L+ Y + + Sbjct: 178 ISIKTVETHIARIKEKLGLNRRSELVRYAMRNNIISTE 215 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 3/206 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ DDHP+V G+R LE E + V GE + L +++TD+ MP Sbjct: 4 PIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMP-- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI L + FP + ++VL+M+++ + + L G VLK L +A+ A Sbjct: 62 -AASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEA 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G + + +LL+ + ++ L+P+E+ VL+ +EG EIA + S++T+ Sbjct: 121 VHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTV 180 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSV 208 + + KL +E AL+ Y Sbjct: 181 ETHRLHLRRKLRIEGQAALMKYAVDH 206 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 7/213 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + + IADDH ++ G+R+ L Q E + VVGE + + + + VL+ D++MP Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI I + I++L+M+ + L G + K +L KA+ + Sbjct: 59 VKDGIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD----KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 +G+++ P+ ++ + + + LS +E +V+ A+G EIA L S+ Sbjct: 119 HEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + + + KL + N+ + + Sbjct: 179 KTVDTHRSHVLKKLELRNNSDITRFAIQHGYIQ 211 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V G+ + LEQ ++VVGE E P++ VL+ D+SMPG Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPEISPDVLVMDMSMPG-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ ++ I + +I+ +M+ N L G V K G DL KA+ + Sbjct: 63 -MGGLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAMGYVAKSGHAEDLVKAVREV 121 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + GK F ++ L+ ++ +RL+ +E EV RL AEG LV +IA +LN KT Sbjct: 122 KSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKT 181 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +++ + S KLG+ + + L+ + Sbjct: 182 VANYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 6/213 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH + G+++ L ++ E + I+ L K ++ D++M Sbjct: 3 KRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAM-- 60 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI +K IK +P I++L+M L G + K P +L KA+ Sbjct: 61 -SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVD 119 Query: 122 ALQKGKKFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + KG K+ P + S L S ++LS +E +V + A+G + EI+K+L+ S Sbjct: 120 KIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSIS 179 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IKT+S+ + + KLG+EN+ ++NY L Sbjct: 180 IKTVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 4/213 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLD-AHVLITDLSM 59 M M++I+ DDH IV G++ L NV+ +F + L+ +L + ++I DL M Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P +GI + IK +P + ++VL+ + + V+D +G +K P L Sbjct: 61 P---ELNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINT 117 Query: 120 LAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + + G++ V ++ + + LS +E EVL+ +EG EIA+KL S Sbjct: 118 IKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSE 177 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+ + KL V + Y L Sbjct: 178 KTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 16/224 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ADDH ++ GI++ L + + VVGE ED + L +L+ D++MPG Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPG-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + K +K+ + II LT++++ + +L G +LK P L KA+ + Sbjct: 61 -LTGLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMV 119 Query: 124 QKGKKFTPESVSRLLEKISA-------------GGYGDKRLSPKESEVLRLFAEGFLVTE 170 +G F ++ L S+ +RL+P+E +VL A+G + Sbjct: 120 NEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQD 179 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 I K L S KT+ + S KL V + L Y+ + + Sbjct: 180 IGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIVSLE 223 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 10/216 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDH IV G R+ +++ + VVGE D + K+ V++ D++MP Sbjct: 5 QMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDIAMP- 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI K IK+ P+ +I++LT + + A+L+ +LK T L +A+ Sbjct: 64 --RLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIR 121 Query: 122 ALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G+ S +R + + L+ +E EVL++ A G +IA + Sbjct: 122 AVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQ 181 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L S +TI + + KL V + + Y Sbjct: 182 LYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDHP++ G+R+ LE E + VV E D IN LD +L+ DL+MPG Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ + I+R ++ I+VLT++++ + VL L + G +LK P L ++ + Sbjct: 60 -VNGLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+ +V+ L ++ LS +E ++L +G EI + L S K Sbjct: 119 HSGQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 T+ + S KL VE+ + L D Sbjct: 179 TVKNHLSSIFRKLAVEDRTQAALKAVKLKLVQLD 212 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M V+I DDH ++ G+ L + V+GE + + +PKL +++ D++MP Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMP--- 56 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + +K+ +P L +++LT++ L + +G +LK P +L +L A Sbjct: 57 VLDGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAA 116 Query: 124 QKGKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 G+ ++ + K ++LSP+E EVLRL + G EIA KL Sbjct: 117 ISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLY 176 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + T+ + + + KL + N + Y L+ Sbjct: 177 VAESTVKNHMRHILEKLHLRNRSEAVGYAIRTGLA 211 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 7/220 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDH + G+R+ LE + + V+GE ED A + + L VL+ D+ MP Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI ++K +K S + +T ++ ++A+ + I+ VLK +L A+ Sbjct: 61 ---KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAI 117 Query: 121 AALQKGKKFTPESVSRLL----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++ +G + V+ L + RL+P+E EVL ++G EIA+K+ Sbjct: 118 RSVYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMV 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KL + + + L+ K+ Sbjct: 178 LSEKTVKNHVSHILKKLDLVDRTQAAVFAWKRGLAQLSKE 217 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 9/217 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +++IIADDH ++ GI+ L+ ++ VVGE D LI + LD +++ D++MP Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI +I +K++ + IVL+M++NP + + +LK ++ KA+ Sbjct: 62 ---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAV 118 Query: 121 AALQKGKKFTPESVSRLLE------KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 A+ G+K+ + ++ ++ + L+ +E EVL+ + G IA K Sbjct: 119 KAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADK 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 L S++T+ + + + M KL V N L+ + + Sbjct: 179 LFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 11/200 (5%) Query: 22 SLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSL 81 L+ + +VGE + L V+I D+S+P GI + IK P Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPD---MSGIEATRLIKEAVPET 57 Query: 82 SIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLE-- 139 +I LTM+ + L + ++K+ A DL A+ A+ +G+ +V+R + Sbjct: 58 RVIGLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEG 117 Query: 140 ------KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKL 193 + L+P+E E+L L AEG EIA++L S KT+ + + + + KL Sbjct: 118 YVSRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKL 177 Query: 194 GVENDIALLNYLSSVTLSPA 213 G+ + L+ Y L Sbjct: 178 GIHDRTELVRYAIRQGLVEP 197 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 109/221 (49%), Gaps = 9/221 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP- 60 + + +++ DDHP+V G ++ L E + +VGE ++ + V+I DL+MP Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPS 62 Query: 61 --GDKYGD-----GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAP 113 + G+ I+ I H P ++VLT + V++ +G + K+ AP Sbjct: 63 DANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAP 122 Query: 114 TDLPKALAALQKGKKFTPESVS-RLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +L +A+ A+ G+++ E + R+ E SA G L+ +E ++ L AEG V+ +A Sbjct: 123 DELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVA 182 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 +++ S KT+ + + + KL + N+ L++ + A Sbjct: 183 EEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIRHNIVQA 223 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 15/218 (6%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DD ++ GI L + + VVG+ + + + LD V++ D+ MP Sbjct: 2 TIRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + P ++I+LT ++ + + G +LK L ++ Sbjct: 60 -VMDGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRT 118 Query: 123 LQKGKKFTPES-VSRLLEKI-----------SAGGYGDKRLSPKESEVLRLFAEGFLVTE 170 + G +++LL ++ S+ L+P+E ++LRL A+G+ E Sbjct: 119 VAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQE 178 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 I ++L S+ T+ + KL V + + Sbjct: 179 IGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 4/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH IV G+R L + +VGE ++ I + HV++ DL MP Sbjct: 5 IRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDLVMPN-- 62 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI + ++ PS IIVLT ++ +S + G +LK +L A+ + Sbjct: 63 -VDGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAIRTV 121 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD-KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G+ F R L + S L+ +E VL G EIA+ L+ + T+ Sbjct: 122 ANGQPFLHAEAQRTLMRQSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSLHLTEGTV 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVT 209 + + KL V + Y Sbjct: 182 KGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+I DDH +V GIR+ LE + V+VV + E + + V++ D+ MPG Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQALAYVKTHSPDVVLLDMKMPGI- 66 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG + + +K+ P++ +I +T + + + VL L G + K+ ++ A+ + Sbjct: 67 --DGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAMGYLTKESGAEEMAAAIRKV 124 Query: 124 QKGKKFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 KG+K+ +++ + + LS +E +V+ + G V +IA +L S K Sbjct: 125 AKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLSSK 184 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 TI+ + KLG++ND+ L + D Sbjct: 185 TINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHPND 220 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 7/220 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ DDH + G++K LE ++ GE D + + + V++ D+ MP Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI LI+ ++ + + +T N+ LS + + + G VLK T+L A+ Sbjct: 61 N---LDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAI 117 Query: 121 AALQKGKKFTPESVSRLLEKI----SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 ++ +G+ + V+ LL L+ +E EVL A+G EI+ K+N Sbjct: 118 RSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMN 177 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KL + + V ++ + ++ Sbjct: 178 LSEKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAESSEE 217 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 9/218 (4%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M N + V+IADD ++ G+ L+ + V+GE + +L V+ D+ M Sbjct: 1 MENLIRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 PG GDG+ + I++ P+ ++IV+T + + L+ GI+LK + TDL + Sbjct: 61 PG---GDGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEG 117 Query: 120 LAALQKGKKFTPESVSRLL-----EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + G+ S++R + + S + L+P+E + + +G EIA Sbjct: 118 VRRAALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATT 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L T+ + SAM K G N + L+ + + Sbjct: 178 LFLEPSTVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKL----DAHVLITDL 57 + +I+ DDHP V G+R LE + + VVGE + L H+++TD+ Sbjct: 3 ETIRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDI 62 Query: 58 SMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLP 117 SM G GI L + FP + ++VL+M+NN + ++ +G VLK +L Sbjct: 63 SMRG---MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELV 119 Query: 118 KALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ A+ G+ F + + E A G+ L+PKES L A G+ +IA++L+ Sbjct: 120 NAIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSM 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S++T+ + + + KL + L+ Y L Sbjct: 180 SVRTVETHRLNLRRKLRITGQAELVKYAIDHML 212 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 6/211 (2%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 M + V++ DDH +V G+R LE + + V GE E T + ++ V++ D + Sbjct: 1 MKKNIKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKL 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P GDGI +KR FP + II+LT + +++ + +G +LK +L Sbjct: 61 PD---GDGIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINT 117 Query: 120 LAALQKGKKFTPESVSRLLEK--ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + A+ KG+ SV+ +L S + L+PKE ++L + + G EIA+ + Sbjct: 118 IQAVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKI 177 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 S KT+ + + + KL V N +Y Sbjct: 178 SDKTVRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 12/219 (5%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V IADDH + G+ LE + + VV ++ LI+ + V++ DL MP Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ K IK +P + ++VL+M + + L+L G +LK P +L A+ Sbjct: 60 -VMDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGT 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDK---------RLSPKESEVLRLFAEGFLVTEIAK 173 + + +S ++ K K L+ +E EVL L + E+A+ Sbjct: 119 VMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAE 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KL S +T+ +K+ + K G +N L+ + L Sbjct: 179 KLFISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 12/221 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DD P++ GIR L V VVGE D + + +L V + D+ MPG Sbjct: 8 SATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPG 67 Query: 62 DKYGDGITLIKYIKRHF-PSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ + I P S++VLTM + + L G+VLK ++L A+ Sbjct: 68 ---MDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAI 124 Query: 121 AALQKGKKFTPESVSRLLEK--------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 A G SV+R L + G L+ +E +V RL +G E A Sbjct: 125 HAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAA 184 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 ++L T+ S +S KLGV + + + Y L Sbjct: 185 ERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVDR 225 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 12/209 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M ++ V+IADDHP+ G+ L V+ E + L +++ D+ MP Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 +GI + I + II++TM + + + + G VLK D+ +A+ Sbjct: 61 D---LNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYG---------DKRLSPKESEVLRLFAEGFLVTEI 171 A+ KG+ V+ + A G L+ +ESEVL L ++G +E+ Sbjct: 118 RAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEV 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIA 200 A+ L S KT+ + + + KL V + Sbjct: 178 AETLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 6/213 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + +++ADDHP++ G+ L VVGE D ++ L V++ DL MP Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G+ +++ ++ ++V T ++ +L L G +LK + T++ A+ Sbjct: 61 GTG---GVEVLRRLRGLDDPPKVVVFTAYDDERLL-EALREGARGCLLKGASRTEIFDAV 116 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G P ++ + K G + L+P+E EVLRL A G E+A+ L S + Sbjct: 117 RTVHAGGSVIPPEITARVLKEMRGES--EPLTPRELEVLRLVARGLTNREVARALFISER 174 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 T+ S + KL EN + L A Sbjct: 175 TVKFHVSSLLAKLRAENRTQAVAIARERGLLRA 207 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 5/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDH + G R+ LEQ + V+VVG+ + + +L V++ D+ +PG Sbjct: 5 RIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPG- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I+ P ++++T ++ + D+ G + K +L +A+ A Sbjct: 64 --MNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G ++ L ++ L+ +E VLRL AEG +IA +L S +T+ Sbjct: 122 VAGGNSVLQPTLMAAL--LAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KLGV + + S L Sbjct: 180 ERHCDRIYGKLGVTSRTEAVVRAISANLLDVSD 212 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 6/214 (2%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 ++I DDH IV G+++ LE VV E + + + I DLSMPG Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPG---M 71 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 +G+ LIK I+ FP + ++VL+M+ G V K GA +L A+ + Sbjct: 72 NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVAT 131 Query: 126 GKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 G + S++ + + G +LS +E EVLR G +T+IA+ L+ S+KT+ Sbjct: 132 GGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTV 191 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S+ K KL + AL+ Y + L+ D + Sbjct: 192 STHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDE 225 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 8/217 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R LE E + V GE D +L+ V++ DL MPG Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPG-- 65 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ ++ ++ + ++V+T + ++ + G V K P L A+ ++ Sbjct: 66 -VDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 124 QKGKKFTPESVSRLLEK-----ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G V+ L + G L+ +E EVL L A+G EIA+ L + Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+ + + +MKLGV + + ++P D+ Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHGIAPEDQ 221 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 6/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH +V G+R+ L E ++V E + + + V++ D+++P Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPD-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K IKR P L +++ +M + L+ G + K P + AL + Sbjct: 60 -LNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGY---GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G ++ S++ L + + LSP+E VL L ++G +T I ++ + S+K Sbjct: 119 VAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 TIS+ + + KL + ++ + Y+ L Sbjct: 179 TISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 7/210 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK----LDAHVLITDLS 58 V++ DDH +V G+R L + VVGE + A + L + ++ITD+ Sbjct: 18 PARVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIG 77 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 M G GI L + +P ++++V++M++N + G VLK +L Sbjct: 78 MRG---MGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMA 134 Query: 119 ALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 A+ A+ G+ F ++R + + L+ +E ++L G EIA +L S Sbjct: 135 AIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVS 194 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSV 208 ++T+ + + + KLG+E L+ Y Sbjct: 195 VRTVETHRLNLKRKLGIEGRAGLVKYAVEQ 224 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 5/213 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ DDH +V G+R L Q + + VV E E++ I+ + + + V + D+ +PG Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEAENAEQAISMIRQNEFDVALVDIGLPG 63 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ L+K IK P +++++L+M L G + K P L A+ Sbjct: 64 KG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGASGYLTKNSPPGTLLAAIR 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGG--YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + G + ++ L G LS +E EVLR A G +T+IA+ L+ S Sbjct: 121 KVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHLSP 180 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+++ + + K G+ ++ L Y + Sbjct: 181 KTVTTYRARIVEKTGLHSNAELTRYALDKGMLS 213 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 13/222 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 ++V+I DD +V G + L + V VVGE + L V++ D+ MP Sbjct: 41 ETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPV 100 Query: 62 DKYGDGITLIKYIK--RHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 + DGI + I ++VLT + + L G +LK P D+ +A Sbjct: 101 E---DGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRA 157 Query: 120 LAALQKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 + + G S++R L + SA G L+ +E E+LR A G EI Sbjct: 158 VRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEI 217 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 A L S T+ + M KL + L+ L Sbjct: 218 ADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQP 259 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 3/205 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DDH +V G+R LE ++VVGE D + + + V++ DLSMP Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I P ++VLT ++ + VL G VLK P DL A+ A Sbjct: 59 VMDGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAA 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G+ V+ L + G RLSP+E++VLRL A+G ++A+ L + +T+ Sbjct: 119 ARGEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVK 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSV 208 + ++GV + + + Sbjct: 179 AHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 18/225 (8%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDHP+ GIR SLE+ + VVGE E+ I +L V++ D+++PG Sbjct: 3 QRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ + + IKR P + +IV+++ + L + + K P DL + + Sbjct: 63 ---LNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIR 119 Query: 122 ALQKGKKFTPESV-------SRLLEKIS--------AGGYGDKRLSPKESEVLRLFAEGF 166 + +GK +SV +R+L + L+ +E E+L A G Sbjct: 120 EVARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGL 179 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EIA +L+ S +T+ + S + KL V + + Y Sbjct: 180 SNKEIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 9/215 (4%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M V+IADDH ++ GI + +E E V+VVGE D L+N L A ++I D+SMP Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI K I+ +P + I+ L+M+ L G +LK+ T++ A+ Sbjct: 61 ---KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAM 117 Query: 121 AALQKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + +GK F ++ + I + + LSP+E EVL L AEG +IA Sbjct: 118 DTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADI 177 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 L S +T+ + S M +L + L+ Y Sbjct: 178 LCISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 14/215 (6%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 +I DD ++ G+ L + VVG D ++ +L +++ D+ MP + Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMP---RIN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ + I+ FP + +++LT N+ ++ L+ G +LK + +A+ + G Sbjct: 58 GVEGTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAG 117 Query: 127 KKFTPESVSRLLEK-----------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 P+ ++ + K ++L+ +E +VLR G EIA+KL Sbjct: 118 GAVLPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + T+ + + + KL + + Y + Sbjct: 178 FITEGTVKNHVSNLISKLELRDRTQAAIYAVRYGI 212 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 7/216 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +IADDH I+ G++ L + V E + + L K L+ DL+MPG Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGR- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI LIK IK FP L I++L+M+ L G + K A T L A+ + Sbjct: 61 --NGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKV 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G F ++V+ L L+ +E ++ + +G VTEI ++LN S+ Sbjct: 119 ADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 KT+S+ K S + K+ + N L+ Y L + Sbjct: 179 KTVSTHKASILAKMNLRNSAELVRYAIQHRLIDEND 214 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 6/215 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + VI+ADDHP+ G++ LE+ E V +VGE D + +L V + D+ MP Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGITL + IK + ++ I+LT ++ + A L +G VLK + L KA+ Sbjct: 61 G---ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + G F V+ ++ A + LSP+E EVL A G E+A +L S + Sbjct: 118 QTVATGSLFLDSEVASVV---GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISER 174 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+ + S KLG N + L ++ Sbjct: 175 TVQTHLASVYDKLGAHNKTEAMLLALKHGLMTLEE 209 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 6/211 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDHPIV GIR LEQ V GE ++ + + A ++I D S+P Sbjct: 5 RIKIVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLP-- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ + I+R P +++ TM+ + +++ L G +LK ++L A+AA Sbjct: 63 -VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGD---KRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 L +G+ + VS + + G D + L+ +E EV+R +EG IA +L S+ Sbjct: 122 LIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSV 181 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+ S + +AM KLG+ N + L+ Y L Sbjct: 182 KTVDSHRTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 10/212 (4%) Query: 6 VIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 +++ DDH +V G+R LE+ VVGE E+ + K +++ D+ +PG Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPG---M 61 Query: 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 +GI + RH PS+ +I+L+M ++ + + + VLK+ + +L AL + + Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GKKFTPESVSRLLEKISAGG-------YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G + VS L + G + LSP+E +VLRL AEG +IA L+ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 ++T+ S +K+ M KLGV N L + + Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI 213 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDH +V G R+ LE V+V GE D+ L V++ D+S+PG Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGA- 64 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++ + P +++ +++ + LD G V K AP L +A+ + Sbjct: 65 --SGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTI 122 Query: 124 QKGKKFTPESVSRLLE--KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + + +S+ L + G ++LS +E EVLRL +G+ + IA+KL S KT Sbjct: 123 ARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +++ + K G +N + L S + L Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMASRLGL 211 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 9/215 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DDH + G+ L + VVGE ++ A ++ + + +++ DL MP Sbjct: 13 STRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQMP-- 70 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + IK P++ II++T+ P L L + G +LK + ++ A+ Sbjct: 71 -VIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQ 129 Query: 123 LQKGKKFTPES-VSRLLEKISAGGY-----GDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + +G+ F V + L +++ + L+P+E +VLRL +G EIA++L Sbjct: 130 VLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELI 189 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + + KLGV + + L Sbjct: 190 ISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 7/212 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDH +VL G+ ++ ++ + VVGE ++ V++ D+ MPG Sbjct: 7 TIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGI 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ + I P++++++LTM + A L G +LK D+ + + A Sbjct: 67 G---GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGA 123 Query: 123 LQKGKKFTPESVSRLLEKISAGGY----GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +G V+ + + L+ +E EVL L A G+ + IA+ L + Sbjct: 124 VARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLT 183 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+++ + + KL + A + L Sbjct: 184 PKTVANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 14/222 (6%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADD ++ ++ L + VVG D ++ L ++ V++ D+ MP Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ K +K +P + II+LT ++ + + L G +LK + +L +A+ + Sbjct: 59 VMDGVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTV 118 Query: 124 QKGKKFTPESVSRLLEKISAG-----------GYGDKRLSPKESEVLRLFAEGFLVTEIA 172 +G +++ + KI + + +S E ++++ G EIA Sbjct: 119 YRGGAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIA 178 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 KL S T+ + + KL + + L + ++ D Sbjct: 179 AKLFLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGVTQRD 220 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 7/214 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V+I DDH ++ G+ +++ + +VGE + T + K V+ D +PG Sbjct: 3 RKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG +++ FP ++VL++ + ++ G V K ++ +A+ Sbjct: 63 A---DGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G+ + P ++ L L+P+E +VL G EIA L+ S T Sbjct: 120 CVVGGETYFPAPIASKLASRRTR----DALTPREHQVLHHIVAGLSNKEIAAALHMSEAT 175 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + + + KL V + + D Sbjct: 176 VKLHISNTLAKLHVADRTQAAIVAVQRGIIHLDT 209 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 89/224 (39%), Gaps = 19/224 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V + DD +V G R L+ + V E D + N V++ D+ MP Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ K I IIVLT ++ + ++ G +LK AP DL A+ + Sbjct: 59 VMDGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGD----------------KRLSPKESEVLRLFAEGFL 167 + + + +L K G L+P+E E+L L A G Sbjct: 119 GEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKS 178 Query: 168 VTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 TEIA++L S+ T+ + + K G + + + + S L Sbjct: 179 NTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 7/217 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ V+IADDH +V G+RK LE + V+ E D IN K ++I D++MP Sbjct: 1 MDKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G DGI + IKR PS+ II LT+ + ++ +LK A ++L + Sbjct: 61 GT---DGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTI 116 Query: 121 AALQKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G+ V+ L + S + RL+ +E +VL L +G E+A+ + Sbjct: 117 HRVMNGEVVIYPRVANRLVRELRQSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFI 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 S KT+ + S KLGV++ Y + + Sbjct: 177 SEKTVKNHLTSIFRKLGVKDRTHAAIYALKNRIVSEE 213 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 6/216 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH ++ I L I + +V E++ + + + + V++ DL MPG Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHAENAEHAVAAVREQEPDVVLMDLQMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ + R P + +I LT+ + + L +G V K +L +A+ ++ Sbjct: 60 -MGGVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGAKGYVHKGADRDELIEAIRSV 118 Query: 124 QKGKKFTPESVSRLLEKIS---AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G+++ V+R + S G L+P+E EVL G T IAK L S K Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 T+S+ + +LGV ND L L A D Sbjct: 179 TVSTYRSRIFERLGVRNDAQLTRIAIDYGLLEAKSD 214 >UniRef50_Q52376 Response regulator gacA n=286 Tax=Gammaproteobacteria RepID=GACA_PSEU2 Length = 214 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 7/215 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V GI + L I+ + VVG+ + + +L V++ D+ MPG Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + + R P + ++ +T+ + +L G + K ++ +A+ + Sbjct: 62 ---GLEATRKMLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLV 118 Query: 124 QKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+++ +++ L + LS +E ++ + V I+ KL S Sbjct: 119 FAGQRYISPQIAQQLALKSFQPQVNNSPFDLLSEREIQIALMIVGCQKVQTISDKLCLSP 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 KT+++ + KL + +D+ L + A Sbjct: 179 KTVNTYRYRIFEKLSISSDVELALLAVRHGMVDAS 213 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 6/212 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IA+D +V G+ L ++ V +VGE ED I L V++ DLSMP Sbjct: 2 TVRILIAEDQQLVRQGLVALLA-VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + IK+ P + ++VLT+ N ++ L +G LK+ +L A+ A Sbjct: 59 -ELDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINA 117 Query: 123 LQKGKKFTPESVSRLLEK--ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 + GK + +S L K + G L+ +E EVL+L A G EIA +L +IK Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T+ + + M KL + N L Y L Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 7/213 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +N++I DDH ++ G++ LE + V+ E E+ ++ L VL+ D++MP Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMP--- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G+ ++K +K + ++VLT++N L +D+ I G VLK +L KA+ + Sbjct: 60 KMNGLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTI 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK----RLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G+ + S+ L D+ L+ +E EVL+ A G +IAK++ S Sbjct: 120 ADGETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISE 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +T+ + S KL V + + + Sbjct: 180 RTVKNHISSIFKKLEVTDRTQAAVFAIRNNIIQ 212 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 5/213 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADD ++ GIR +E + + E D I+ + +L V++ D++MP Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + + I++ P+ I+VL+ + P I+ L + G +LK +L +AL Sbjct: 61 GP---SGIEVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQAL 117 Query: 121 AALQKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + G++F + +L+ +++E+LRL A G EIA+ L S Sbjct: 118 EMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGIS 177 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ + M ++GV + L + + Sbjct: 178 PKTVEFHRSRLMERIGVHDVTGLTRFALQTGVV 210 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 107/207 (51%), Gaps = 4/207 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDHP+ G+R L + V+ E ++ + L K+ +++TD++MP Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L++ IK S +++L+M++N + A + +G +LK +L +A+ + Sbjct: 59 QMDGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 GK++ V L + A G ++ +E VLRL + G IA++++ S++T+ Sbjct: 119 AAGKRYFSADVINTLSQELASGK-QALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVE 177 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTL 210 + K++ KL +++ L+ Y L Sbjct: 178 THKRNIKQKLMIDSTAGLVRYAIDHGL 204 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 5/212 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N + +++ DDH IV G R L++ + + V+ E D T + K +++ D+S+PG Sbjct: 3 NVITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQYKKYQPDIVVMDISLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I++ I+V +M+ NP+ G + K P DL +A+A Sbjct: 63 Q---SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGALGYITKSSDPEDLIRAIA 119 Query: 122 ALQKGKKFTPESVSRLLE--KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + K K +++ L K+ L+ +E E+LRL + +IA+ LN S Sbjct: 120 EVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISP 179 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+S+ KLGV +DI L + L Sbjct: 180 KTVSNSHYIIKKKLGVSSDIELTRLAIKMNLV 211 >UniRef50_Q1QVM5 Two component transcriptional regulator, LuxR family n=29 Tax=Gammaproteobacteria RepID=Q1QVM5_CHRSD Length = 214 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 5/211 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADDH +V I + L+ + + V+ E D +N +L +++ D+ MPG Sbjct: 2 IKVLVADDHHLVRTSIARMLDSEDGLKVIAEAVDGEEAVNMARELRPDIVLMDIRMPGIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + I R + ++++T A ++D G + K ++ +A+ A+ Sbjct: 62 ---GLEATRKIMRGMSDIKVVIVTAFLEEAFAQRLMDAGAAGFISKGTELDEMVRAIRAI 118 Query: 124 QKGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G+++ +++ +L K+ +LS +E +V + V++I+ +L S KT Sbjct: 119 FDGQRYISPDIAQKVVLSKMGTQDNPFDQLSHRELQVAMMIVNCQKVSDISDRLFLSPKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 +++ + KL V++D+ L + L Sbjct: 179 VNTYRYRIFEKLNVQSDVELTHLGLRYGLID 209 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 N++ +++ DDH +V G+ L Q + VV E +D+ + + + V + D+ MPG Sbjct: 5 NSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDVRMPG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI ++ I+ FP +I+LT + + L+ G +LK +L A+ Sbjct: 65 ---ASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAVR 121 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G++ P+S LE G RLSP+E E L L A GF EI L + +T Sbjct: 122 KVHAGERCVPQS----LETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERT 177 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + ++ ++KL + ++ L AD Sbjct: 178 AKAHVQAILVKLEAADRAEAVDAAYKRGLLRAD 210 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 9/212 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DD ++ G+R E + VVGE + A + +L +++ DL MPG Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPG-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGIT + I PS ++ LT ++ L L G ++K +P +L +A+ Sbjct: 60 -MDGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKA 118 Query: 124 QKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G V + + + S +L+ +E EVL L G+ +IA++L+ Sbjct: 119 ADGDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHL 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVT 209 + T+ + S M K G N + L Sbjct: 179 GVTTVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 17/221 (7%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +NVIIADD IV GI+ L + +NV+GE E+ LIN L A V++ D+ MP Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ K IK + +I+LT N + + +G +LK + A+ ++ Sbjct: 59 IIDGVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSV 118 Query: 124 QKGKKFTPESVSRLLEKISAG--------------GYGDKRLSPKESEVLRLFAEGFLVT 169 G V+ + K L+P+E +V +L A+G Sbjct: 119 YNGAMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNK 178 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 +I + L + T+ + + KL + + L +++ + Sbjct: 179 DICRSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 4/211 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ D+HP+VL G++ LE + + V G + ++ ++ V++ D++MP Sbjct: 6 KIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 GI I+ + FP + +++L+M+++ +S+ + G VLK + ++ A+ Sbjct: 64 -KLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIET 122 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G + V L A G L+P+E ++L L G EIA+ L S T Sbjct: 123 VADGGTYFSSGVFDALMGERAEE-GSDPLTPREHDILGLIVAGRSNREIAEVLGISSATA 181 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 + +K+ KLG+ L+ Y ++ + Sbjct: 182 ETHRKNLKKKLGIATTAGLIRYALDHGIASS 212 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDHP+V G+ + + VVG+ + T + K V++ DL MPG Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPG-- 80 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ + I+ P ++IVLT + L + +LK + L +A+ ++ Sbjct: 81 -MSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSV 139 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 + G + P ++ + G LSP+E ++LRL G EIA LN + T+ Sbjct: 140 RTGHTYFPRAIRNSV----PGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVK 195 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLS 211 + +L V + + + Sbjct: 196 WHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 5/204 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IA+DH ++ GI+ E E + VG + LI + +++ITD+ MP Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI K I FP++ II +M + + +L+ G +LK + +L A+ + Sbjct: 59 VMDGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G+ + +++ +++ S L+ ++ E+L+L +G EIA +L T+ Sbjct: 119 HEGEHYYDPNIT--VKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVE 176 Query: 184 SQKKSAMMKLGVENDIALLNYLSS 207 + +K+ + KLG++ LL Y Sbjct: 177 THRKNMIRKLGLQGAGELLRYALE 200 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 18/225 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V + DD ++ G+ ++ + VV E + ++ A V++ D+ MP Sbjct: 8 PVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLMDVRMP-- 65 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DGI + + R + ++VLT + ++ G +LK P +L A+ Sbjct: 66 -EMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLAAIRT 124 Query: 123 LQKGKKFTPESVSRLL---------------EKISAGGYGDKRLSPKESEVLRLFAEGFL 167 + +G S +R L + L+P+E EVL L A+G Sbjct: 125 VHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMAQGAA 184 Query: 168 VTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 EIA +L S T+ + + KLG + + + L Sbjct: 185 NLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLVQ 229 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 5/210 (2%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ADDHPIV G++ L+ ++VV E D + + + V++ DL+MPG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DG ++ + +IVLT ++ + G + K P L +A+ Sbjct: 63 S---DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIR 119 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 ++ G+ + + L+ +E EVL L A G EIAK+L+ + KT Sbjct: 120 SVADGQVIFAREAVTAM--TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKT 177 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + S KLGV + Y + ++ Sbjct: 178 VKTHLSSLFRKLGVADRTQAALYAVTHGMA 207 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 9/210 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V+I DDH I+ G+ + + ++V G +++ + K V++ D+S+PG Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTMPDVVLVDISLPGK-- 77 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ LIK I +P ++++VL+M+ VL G ++K L A+ + Sbjct: 78 -SGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVL 136 Query: 125 KGKKFTPESVSRLLEKISAGG------YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 G E V+ + + +G + LS +E EV +L +G+ +IA++L+ S Sbjct: 137 AGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLS 196 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSV 208 +KT+ + + S KL +++ L++Y S Sbjct: 197 VKTVEAYRASIKQKLYLKSGPQLVHYAISW 226 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 9/216 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +IIADDH + L G+R L + + ++V+ + + V++ D++MP Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI + IK + I+ L+M+ + +++ +L G LK+G+ +L +A+ + Sbjct: 59 KMNGIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIV 118 Query: 124 QKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ + ++ +L K +A LS +E EVL L A+G E+A L+ Sbjct: 119 SSGETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S T+ + ++ M KL N L+ + L Sbjct: 179 SKNTVDTHRRRIMEKLDCGNIAELIRFAIREGLIDL 214 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 5/208 (2%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 ++ADDH +V GIR L+++ + VVGE + + L VL+ D+SMP + Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMP---VMN 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ +++ P +++++L++ +NP + V+ G +LK + ++ A+ ++ G Sbjct: 58 GLEAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASG 117 Query: 127 KKFTPESVSRLLEKISAGGYGDKR--LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISS 184 + +V L + L+ +E +VL A G E+AK+L S++T+ S Sbjct: 118 GYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVES 177 Query: 185 QKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + K+G +N L + L Sbjct: 178 HRLNLREKVGNKNAAQLYKVAQDLGLLD 205 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 5/208 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDHP+V GI L + VVGE ED ++ L V+ITDL MP Sbjct: 28 TVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLRMP-- 85 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + I ++ ++VLT + ++ G +LK +L + Sbjct: 86 -VLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIRE 144 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+ SV+ L +S G RL+P+E EVLR A G + +L S T+ Sbjct: 145 AARGQTVLTPSVATRL--VSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTL 210 + A KLGV + + + L Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVATDRGL 230 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +++ DDHP++ G+R+ + + V GE E++ + + +++ D+++P Sbjct: 11 KATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPD 70 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G+ L+K ++ P L ++V++M++ VL G ++K + +A+ Sbjct: 71 K---NGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIR 127 Query: 122 ALQKGKKFTPESVSRLLEKI------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G+ F E +S + ++ A + L+ +E EV RL EG EIA + Sbjct: 128 HVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANM 187 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 + S KT+ + + KLG++ L+ Y Sbjct: 188 HVSAKTVEVHRMNIKTKLGLKTAAELIRYTVRW 220 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 7/212 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++A+D +V G++ +E E + V GE +D + V I D+ MP Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI K ++ +P + I++LT ++ + L L + G +LK G L +++ + Sbjct: 59 EMDGIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKST 118 Query: 124 QKGKKFTPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 G + V+ L + D L+P+E +L EG EIA++L S+ Sbjct: 119 INGGLSLEDQVAAKVVPTLLQNQEEPSIDPSLTPRERAILTCIGEGLNNKEIAERLGLSV 178 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+ +Q KL + + L Y L Sbjct: 179 GTVKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 13/222 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V+IADD +V G L + VVG + + L V++ D+ MP Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GDG+T + + FP +IV+T + + LD G +LK P +L A+ + Sbjct: 59 HGDGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKR----------LSPKESEVLRLFAEGFLVTEIAK 173 +G ++ L A LS +E +V++L ++G +IA Sbjct: 119 AEGGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIAD 178 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 L+ T+ S + KL V + ++ + + + Sbjct: 179 SLSLEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVIAVSR 220 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 4/208 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDHPI+ G+R L+ E VVG+ D L +++ DL++ GD Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ L + + PS +++V T ++ A LD G +LK P +L A+ Sbjct: 62 --DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTA 119 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 + G +V+ L + L+P+E EVL L A G ++ ++L S T+ Sbjct: 120 RDGGSALSPAVASRLMDRMRA--PQESLTPREIEVLALLATGRTNRQVGERLFVSETTVK 177 Query: 184 SQKKSAMMKLGVENDIALLNYLSSVTLS 211 + KLGV+ A ++ L Sbjct: 178 THVNHIFTKLGVDTRAAAVSRAMKEGLI 205 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH ++ G+R LE + +VGE I +L V++ DLS+P Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKANQLKPDVVLMDLSLPNG- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG T K I++ P + I++LTM++ + + + G +LK L +A+ + Sbjct: 61 -LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGAHGYILKNSHGELLFQAIVEV 119 Query: 124 QKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +GK F SVS+ + S L+ +E E++RL G+ E+A KL S+K Sbjct: 120 YRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSV 208 T+ + K + M KLG+++ L+ Y Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYAIKN 207 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 7/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + V++ DDH +V G R L + VVGE E V++ DLS+PG Sbjct: 3 SKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ I+ S I+V ++++ + L+ G + K AP L +A+A Sbjct: 63 IG---GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVA 119 Query: 122 ALQKGKKFTPESVSRLLE----KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 + G+ F +++ L + LS +E +V L A+G+ E+A++L Sbjct: 120 RIASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEELRL 179 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 KT+++ KLGV + + Sbjct: 180 GYKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 10/216 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++I DD P V +R L++ E +NVVG ED I+ +L HV++ DL M + Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDM---Q 439 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 + DG+ K IK+ +P + +++ T + L +G +LK +L + + Sbjct: 440 HMDGVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLI 499 Query: 124 QKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 KG + +S + + L+ +E E+L+L A+G T IA +L Sbjct: 500 HKGGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLY 559 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 S T+ + +A KLGV N + + + Sbjct: 560 LSNGTVRNYASTAYTKLGVRNKEEAVQKALEIGIIE 595 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 9/212 (4%) Query: 7 IIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 +I DDH ++ GI+ L+ V E E + L + ++I D+SMPG Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPG---MG 57 Query: 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKG 126 G+ I+ I+ H+P++ I+VL+M+ + + + G + K A +L AL L +G Sbjct: 58 GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQG 117 Query: 127 KKFTPESVSRLLEKIS------AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +++ + + L I A L+ +E EV G+ +TEIA++L+ S+K Sbjct: 118 RRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 T+ + KK KL L+ L Sbjct: 178 TVDTHKKHIYEKLHCSRRSELVTLALRNGLLQ 209 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 10/217 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 NN +V+I +DH ++ G+R L +V GE D L +++ DLS+PG Sbjct: 3 NNCSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPG 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +GI I IKR P + II L+++ N + L ++G VLK + DL A+ Sbjct: 63 ---MNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMR 119 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 + GKK + L ++S G L+ +E VL+L AEG ++ Sbjct: 120 VVLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIY 179 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 +N S KTI + S M KLG+ N L+ S+ L Sbjct: 180 MNLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 84/225 (37%), Gaps = 19/225 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKL--DAHVLITDLSMP 60 + V + DD +V G R ++ + VV E D + L L A V++ D+ MP Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+T + + ++VLT + + + G +LK P ++ A+ Sbjct: 69 ---RMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAI 125 Query: 121 AALQKGKKFTPESVSRLLEK--------------ISAGGYGDKRLSPKESEVLRLFAEGF 166 + G S +R L + S L+ +E EVL L A G Sbjct: 126 RTVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGR 185 Query: 167 LVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 TEIA L + T+ + + KL + + + + Sbjct: 186 SNTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVV 230 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 6/213 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + VIIADDH I+ G+++ L + E + V+ E +++ I + +A VL+ D+S+P Sbjct: 7 KIKVIIADDHAILRAGLKQILSETEDILVIAEAQNANEAIKLGSQPEADVLLLDISLPDR 66 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ +KYIKR +++++L+M+ L G + KQ A ++L A+ Sbjct: 67 ---SGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAAGYLCKQSASSELVNAIQT 123 Query: 123 LQKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSI 179 + +GKK+ V+ +L + LS +E + + A G VT++A KL+ S+ Sbjct: 124 VARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVANKLSLSV 183 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 KT+S + + K+ ++++ L +Y L Sbjct: 184 KTVSMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 11/217 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +I+ADDH ++ G+R ++ VVGE D AL+ + ++ A VL+ DLSMP Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ IK +K + I+VLTM+ + + G + KQ ++L A+ Sbjct: 61 ---RVSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGALGYIEKQALDSELFVAI 116 Query: 121 AALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAK 173 + G+++ + +L +A L+ +E EVL+L G +T+IA Sbjct: 117 RTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAG 176 Query: 174 KLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 L+ S+KTI + K M KL + + L++Y L Sbjct: 177 LLHLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGL 213 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 5/209 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDHPIV G R+ LE ++VV E +++ D V++ D+SMPG Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHVVAEADNAADAYGAFKAHDPDVVVLDISMPGA- 67 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ I+ P I+V TM+N ++ A G V K P+ + A+ ++ Sbjct: 68 --SGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVTKSSEPSAVVNAIRSV 125 Query: 124 QKGKKFTPESVSRLLEK--ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G++ + ++ +L +S G +L +E E+LR FA G +IA LN S+KT Sbjct: 126 ARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLSVKT 185 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTL 210 + + K G D L+ +S L Sbjct: 186 VQNYHYLIKTKTGARTDAQLVRLAASCGL 214 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 11/216 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DD P+V +R + +++ + + GE E + +L V++ DL MPG Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPG-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI I R P ++VLT + + L G ++K + D+ A+ + Sbjct: 61 -MGGIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTV 119 Query: 124 QKGKKFTPESVSRLL--------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 G SV+R L + ++ +E EVL L G +EIA +L Sbjct: 120 AHGNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADEL 179 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ + + KLG + + L+ L+ Sbjct: 180 RLSHATVKTYITRLLSKLGARDRVHLVIAAYEAGLA 215 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 11/220 (5%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + +++ DD P+V +R E +NVVGE + + + +L +++ D++MP Sbjct: 7 SEIQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMP- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI +K IK ++P + +I+LT++N + + VLK P L + + Sbjct: 65 --KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVE 122 Query: 122 ALQKGKKFTPESVSRLL-------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 ++ +G+ F S++ L L+ +E EVL+L G EIA K Sbjct: 123 SVAEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGK 182 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 LN +++T+ + S +MKL V + L Sbjct: 183 LNITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQPP 222 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++IADDH IV G+++ + + V E + +++ L +L+ D++MPG Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGI- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ LI+ ++ P+L ++VL++++ + S L G + K P L A+ L Sbjct: 61 --SGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKL 118 Query: 124 QKGKKFTPESVSRLL--EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 G +F + + E + LS +E +VL++ A G + EIA S KT Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IS+ K M KLG+ N+ ++ Y L Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDH IV G+ LE + V GE D ++ L V++ D++MP Sbjct: 2 TVRILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMP-- 58 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +GI + I P + +IVL+M+N + + +LK+ A + L A+ A Sbjct: 59 -ELNGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRA 117 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + +G+ + E V + ++ LS +E EV++L EG EIA+ L+ S K+I Sbjct: 118 VIRGECYFGEGV-DAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSI 176 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + M+KLGV N AL+ + ++P Sbjct: 177 ETYRSRLMVKLGVGNIPALVKFALQHGITP 206 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 8/211 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADDH + GI+ LE +VGE + + + L +++ DLSMP Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDLSMP--- 1494 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ I+ I PS+ +IVLT + L + +G + K + + L + Sbjct: 1495 VMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNV 1554 Query: 124 QKGKKFTPESVSRLLEKISAGG---YGDKRLSPKESEVLRLFAEGF-LVTEIAKKLNRSI 179 +G+ ++ L + + L+ +E E+L+L G +++++L S Sbjct: 1555 IRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSE 1614 Query: 180 KTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ ++ + KL +++ ++ + L Sbjct: 1615 HTVKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 12/221 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + ++I DDHP+ G++ L + V GE + + + D+S+P Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 GI L + +++ PSL I++++M+ ++ L + G + K A +L L Sbjct: 61 DR---SGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGL 117 Query: 121 AALQKGKKFTPESV---------SRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 A+ G+ + ++ ++ L+P+E EV+RL EG E+ Sbjct: 118 RAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEV 177 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 A L S+KT + S M KLG++N + L+ Y + + L Sbjct: 178 AAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLID 218 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 7/211 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + ++IADDH +V G+ + + VV E D + K + + + DL MP Sbjct: 6 KIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDLRMP-- 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ I+ F + +++LT + + L +G VLK L AL A Sbjct: 64 -VKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPALRA 122 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G+++ P+ V+ L A ++LSP+E +VL A G EIA LN + T Sbjct: 123 VAAGQRWIPKEVANRL----ALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTT 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 KS + KL V + + + Sbjct: 179 KDHLKSILAKLRVADRTEAVTVALQRGIIHL 209 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 7/209 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ DDH I+ G+ L ++ + V+G+ D I+ L V+I DL M Sbjct: 5 TIRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRM--- 61 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG + I+ FP+ +I+LT + + L +LK P L + A Sbjct: 62 VPMDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHA 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G+K S++ L + A L+ ++ EVLR AEG EIA L S T+ Sbjct: 122 VYAGRKAIDPSIAAKLAEHVAS----DALTARQLEVLRSLAEGRSNIEIANTLYISEGTV 177 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + K+ + KLG + + L Sbjct: 178 KAHIKAILQKLGARDRTQAVTIGIKRGLI 206 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 4/210 (1%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +N+ +++ DDHP+ G+ L Q +V E D + +++ D+ MP Sbjct: 4 SNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 +G + + P L +++LT++ + L L+L G +LK L +A+ Sbjct: 63 --VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIR 120 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYG-DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 G++ ++ + I L+ +E +VLR A G IA+++ S Sbjct: 121 QAVAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSEN 180 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + ++ KL ++N + Y + L Sbjct: 181 TVKAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 6/210 (2%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 ++V++ DDH +V G R+ LE + VVGE ED + +L V++ D +MP Sbjct: 5 PISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMP-- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G ++I R P +I++L+M+ + + L+ + G +LK ++ A+ Sbjct: 63 -SMNGAVAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQ 121 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + GK+ + L G L+ +E EVL+L G EIA L+ S T+ Sbjct: 122 VAAGKQVLDRRLGAL---DLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + + M LG+ N L+ Y L Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLVS 208 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH ++ G++ LE+ + ++++ T + +L VL+ D++MP Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPN-- 59 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +GI +++ + + + S+I+L+M+++ + + +G VLK +L A+ + Sbjct: 60 -LNGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQV 118 Query: 124 QKGKKFTPESVSRLLEKI--SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 +G+ + S L + A D LS +ES+VL+ A G EIA L+ S++T Sbjct: 119 AQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + + + KLG + AL+ L Sbjct: 179 VETHRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 7/212 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + V + DDH IV G+R++L + + + VVGE + + +P L HV + D +P Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLP 92 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G GI + + ++ P ++ ++LT ++ L + + G VLK+ DL A+ Sbjct: 93 D---GSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAI 149 Query: 121 AALQKGKKFTPESVSRL----LEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+ SV+R L + L+ +E E+L+L A+G +I +L Sbjct: 150 RTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLG 209 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 S KT+ + S + KLG+ + YL Sbjct: 210 LSEKTVKNYVSSILEKLGLASRTQAAVYLMKQ 241 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 20/225 (8%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + +++ADDHPI G+ + L E VV + +D +++ L + + +L+ DL MPG Sbjct: 22 KIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPG- 80 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ ++ ++ +IVLT +++ + L GIVLKQ A L K++ Sbjct: 81 --LDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRK 138 Query: 123 LQKGKKFTP-----------------ESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEG 165 + G+ + +++ + LS +E E++ L A+G Sbjct: 139 VHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQG 198 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 F E+A+K+ S +T+ + + KLGV + + L Y L Sbjct: 199 FKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 6/211 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ DDH +V GI + L + V+GE + A I + L V++ D++MP Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEVIGEADSGEAAIRMVKALSPDVVLLDVNMPNIG 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 G+ K +++ + I+ ++ ++ S +L + G + K ++ KA+ + Sbjct: 62 ---GVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKAGVNGYITKGTPLDEMIKAIKKV 118 Query: 124 QKGKKFTPESVSRLLEKI---SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 +G K+ V+ L + RLS +E +V + +IA +L S+K Sbjct: 119 YQGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFVSVK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+++ + K+GV++D+ L + L Sbjct: 179 TVNTYRYRIFEKVGVDSDVKLTHLAMRHGLI 209 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 6/219 (2%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M + + I DDH +V G++ + E + +VGE + +P + V++ D+ + Sbjct: 1 MEKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQ 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G + I P + +++L+ P + A VLK ++ KA+ Sbjct: 61 GIH---GADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR---LSPKESEVLRLFAEGFLVTEIAKKLNR 177 A+ +G+ F ++ + + G + LS +E E+L L EG EI ++L Sbjct: 118 KAVMQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFL 177 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 S KT+ + + KLGV N +++ ++ D Sbjct: 178 SEKTVRNHVSRILDKLGVSNRSQAAAFMARRSVIEKMTD 216 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 14/225 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 V++ADD +V G+R +++ + VVGE + + A V++ D+ MPG Sbjct: 12 EPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPG 71 Query: 62 DKYGDGITLIKYIKRHFP--SLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 DG+ + I + +++LT + L G + K P L A Sbjct: 72 ---LDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDA 128 Query: 120 LAALQKGKKFTPESVSRLL---------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTE 170 + + +G S +R L + L+ +E E+ L A+G T+ Sbjct: 129 IRTVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTD 188 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 IA++L S T+ + AM KLG + L+ L+ + Sbjct: 189 IARQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGLAHPPR 233 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 3/205 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 N+ V++ DDHP VL G+R LE + V+G+ I + ++++D+ MP Sbjct: 4 NLRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDA 63 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G+ L FPS+ +I L+M+ +P + L + VLK+ +L A+ Sbjct: 64 ---NGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRT 120 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 + G + + L + L+PKE+ VL+L AEG EIA++L S++T+ Sbjct: 121 VAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTV 180 Query: 183 SSQKKSAMMKLGVENDIALLNYLSS 207 + + KL V L+ Y Sbjct: 181 ETHRLHLRRKLRVGGRAELVKYAVH 205 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 248 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 6/210 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ DDH +V G+ + E + VVGE + L+ L +++ DL MPG+ Sbjct: 3 VRLIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGE- 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G LI+ I+RH+P L I++L+ ++ ++S + G + K +P L +A+ + Sbjct: 62 --NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKV 119 Query: 124 QKGKKFTPESVSRLLE---KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 K+ ++ L I LS +E E+ RL EG +I+++L S + Sbjct: 120 VATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDR 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+S+ K + + KLG++N + L++Y L Sbjct: 180 TVSAHKINLLNKLGLKNVVELVHYSIQHQL 209 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 248 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 3/205 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++V++ DDH ++ G+ + + VVG D + + +L HV++ DLSMP Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I PS+ ++VLT ++ + LD G VLK P DL A+ + Sbjct: 59 VLDGVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRST 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTIS 183 +G V+R + L+ +E EVL L G +IA++L T+ Sbjct: 119 ARGHSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 184 SQKKSAMMKLGVENDIALLNYLSSV 208 + S ++GV + + + + Sbjct: 179 AHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 14/222 (6%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DD + GI ++ + + VVG+ D + + + L V++ D+ MP Sbjct: 33 RIRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMP-- 90 Query: 63 KYGDGITLIKYI------KRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 DG+ + I + +IVLT + +A + G +LK P L Sbjct: 91 -ELDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAML 149 Query: 117 PKALAALQKGKKFTPES-----VSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEI 171 A+ + G + G + L+PKE EVL A G EI Sbjct: 150 RDAIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEI 209 Query: 172 AKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 A++ S T+ + + + KLG+ + + ++ L Sbjct: 210 ARRAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLVDP 251 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 92/222 (41%), Gaps = 15/222 (6%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 +++++ +DH ++ G++ V+GE E+ I+ +L ++++ D+ +P Sbjct: 4 QPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIELP- 62 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI+ + IK P + ++ L+ + +L +G LK L + Sbjct: 63 --ILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIR 120 Query: 122 ALQKGKKFTPESVSRLLEKI------------SAGGYGDKRLSPKESEVLRLFAEGFLVT 169 +Q G + ++ L + LS +E EVL+L +EG Sbjct: 121 LIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQ 180 Query: 170 EIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EIA +L S+ TI S + + KL V++ + L Sbjct: 181 EIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 9/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIE---WVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 ++V++ DDH +V GIR L++ + VVGE + +L V++ D++MP Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMP 61 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G G+ + I PS+ ++VLT + + VL+ G + K ++ A+ Sbjct: 62 GIG---GLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAI 118 Query: 121 AALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNR 177 +G++ +V++ L LS +E ++L + +G IA LN Sbjct: 119 QGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNI 178 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S KT+S+ K M KLG+ ND+ L+ + L Sbjct: 179 SPKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLI 212 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 55/224 (24%), Positives = 92/224 (41%), Gaps = 24/224 (10%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 + + DD +V G R L+ ++VVGE D + ++ L + A V++ D+ MP Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMP---R 60 Query: 65 GDGITLIKYI--KRHFP---SLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 DGI + + + P ++VLT + A L+ G +LK P +L A Sbjct: 61 LDGIEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAA 120 Query: 120 LAALQKGKKFTPESVSRLLEK----------------ISAGGYGDKRLSPKESEVLRLFA 163 + A+ G S ++ L + Y + L+ +E EV A Sbjct: 121 IRAVASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVA 180 Query: 164 EGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSS 207 G TEIAK+L + TI + + KLG + + L+ Sbjct: 181 AGLSNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 9/213 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + V++ DDH +VL G R L + V + + L ++ +++TDL++ G Sbjct: 8 SKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGG 67 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ LIK + FP I+V +M++ + L G V+K A+ Sbjct: 68 R---SGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVR 124 Query: 122 ALQKGKKFTPESVSRLLEK------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + G+++ ++ + + ++LS +E EV RLF EG EIA +L Sbjct: 125 TVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQL 184 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSV 208 N S KT+S + KLG ++ Sbjct: 185 NLSPKTVSVHRDHIKEKLGFSTSAEMIRQAVRH 217 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 21/230 (9%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDHP+ G+R +L + ++GE + + + + + V++TDL++P Sbjct: 4 TVKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPN- 62 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + I+R +P++ +++L++ + L K+ +P L L Sbjct: 63 --MDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRR 120 Query: 123 LQKGKKFT------PESVS-RLLEKISAGGYG-----------DKRLSPKESEVLRLFAE 164 + +G+ V+ R+L + G LS +E EVL A Sbjct: 121 VARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIAS 180 Query: 165 GFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 G +IA L S +T+ + S + KL + + + Y Sbjct: 181 GATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETP 230 >UniRef50_C5UZV9 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZV9_9PROT Length = 213 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +++ DDH ++ G+++ LE + + GE T I+ L +++ D+++P Sbjct: 2 IQILVVDDHALIRKGLKQLLEDTPDLKITGEASSGTEAISMLRAAPFDLMLLDINLPDKH 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI ++K K P L II+L+M L G + KQ A L KA+ + Sbjct: 62 ---GIEVLKQFKSEQPQLKIIILSMYPEDQYGVRALKAGAMGYINKQSASDVLIKAIRHV 118 Query: 124 QKGKKFTPESVSRLLEKISAGGYG---DKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 GKK+ E ++ L G + LS +E + L L A G ++EI++ + S K Sbjct: 119 LSGKKYISEILAEQLLNNLIGESQELMHQNLSNREYQTLCLMASGKTLSEISQIMALSPK 178 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+S + + K+ N+ ++Y + L Sbjct: 179 TVSVYRSRMLAKMTFTNNAEAIHYAITHRLVELQD 213 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 10/214 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 M V+IADDH + +R LE V VVGE E + +L V++ DL MPG Sbjct: 1 MRVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPG-- 57 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I P + ++VLT + + L + G + K + L A Sbjct: 58 -MDGLAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAA 116 Query: 124 QKGKKFTPESVSRLLEKISAGGYG-----DKRLSPKESEVLRLFAEGF-LVTEIAKKLNR 177 +G+ ++R L + + G + L+ +E E+L L +G E+A++L Sbjct: 117 SRGEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLIL 176 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S T+ ++ + KL ++N ++ Y L Sbjct: 177 SENTVKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 4/209 (1%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ +DH +V G+R LE V VVGE + L K+ A V I D+S+P Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDGT 61 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 GI L + ++ FP L ++ L+M+ + + L +G V K +L A+ A+ Sbjct: 62 ---GIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAV 118 Query: 124 QKGKKFTPESVSRLLE-KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+++ +++ L ++ + LSP+E EVLRL A+G E+A+KL S KT+ Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLS 211 ++ ++ M KLG+ + LL Y + Sbjct: 179 ATYRERGMEKLGLASRSELLRYAARKGWI 207 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 3/210 (1%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M +NV + DDH +V G + L + VVG++ + +L KL+ V + D++MP Sbjct: 1 MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 + G++L+ +++ P+ I+L++ + A + + LD G + K+ P +L +A+ Sbjct: 61 DE---SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAV 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 A+ G + R L + L+P+E E+ L G V IA++L+ S K Sbjct: 118 RAVHAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHK 177 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTL 210 T+ + + + KL + L+++ L Sbjct: 178 TVHVHRANVLDKLHCATTVELVHFALQHQL 207 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 12/219 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V++ADD ++ G+R L + VV E D I+ + V++ D+ MP Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + ++R P ++++LT ++ L G +LK G P +L + A+ Sbjct: 59 RMDGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAV 118 Query: 124 QKGKKFTPESVSR---------LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 +G + V+ + ++ A L+P+E +VL L EG +IA++ Sbjct: 119 AEGAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARR 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 L T+ + + + +LG N + L + Sbjct: 179 LYLVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLLDS 217 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 8/214 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ DDHP++ G+ L + ++GE D I +L V++ DL MP Sbjct: 7 PIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMP-- 64 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ I I+ P IIVLT L +LK +L + Sbjct: 65 -RLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRM 123 Query: 123 LQKGKKF-TPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G++ P +V+ + A + RLSP+E+EVLR A G I +++ S +T Sbjct: 124 VAGGRRAPIPPAVAASI----AAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQT 179 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 + + KS M KLGV + + + D Sbjct: 180 VKAHMKSLMDKLGVGDRTHAVTQALRRGIISLDD 213 >UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2 Tax=Flexibacteraceae RepID=C6W5G0_DYAFD Length = 219 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 13/222 (5%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M+ + + IADDH + G L I + E + L++ LP ++ DL MP Sbjct: 1 MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQELLDRLPANTPDIVFMDLQMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DGI + FP++ IIV++M N + +L+ ++G +LK +P ++ KA+ Sbjct: 61 ---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKGVQGYLLKDTSPDEVEKAI 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDK----------RLSPKESEVLRLFAEGFLVTE 170 + + + + VS+ + + +K LS +E EVL+L +G TE Sbjct: 118 RRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLSTTE 177 Query: 171 IAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 I KL S++T+ + + K G ++ A + + L Sbjct: 178 IGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAYKNQLLS 219 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 16/223 (7%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ADD P + G+R L+ + + V+GE ++ + +++ D+ MPG Sbjct: 5 KMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDIRMPG 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 GI K I P+ +++LT + + + G +LK +L + Sbjct: 65 GT---GIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGIR 121 Query: 122 ALQKGKKFTPESVSRL-----LEKISAGGYGDKR--------LSPKESEVLRLFAEGFLV 168 A+ +G S ++ L D L+ +E+EVL+L A G Sbjct: 122 AMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKRN 181 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 EI+ L S T + M KLG + + + L Sbjct: 182 HEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLV 224 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 8/217 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + +++ + DDHP+V G ++L + VVG+ + + V++ DL++P Sbjct: 20 SKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPD 79 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 DGI L+ ++ P ++VL+ ++ ++ L +G ++K ++ + + Sbjct: 80 R---DGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIR 136 Query: 122 ALQKGKKFTPESVSRLLEKISAGGY-----GDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G S++ + + G L+P+E +VLRL A G E A +L Sbjct: 137 RIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLT 196 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S KT+ + + KLG ++ + L L A Sbjct: 197 ISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIEA 233 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 21/227 (9%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPK-----LDAHVLITDLS 58 + V+I DDH IV GI++ L + + GE + + + V++ D++ Sbjct: 2 IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 59 MPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPK 118 MP DG+ ++K +K FP L +++L+ + L L G + K + Sbjct: 62 MPQR---DGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAAGYLNKSADSEQMID 118 Query: 119 ALAALQKGKKFTPESVSRLLEKISAGG-------------YGDKRLSPKESEVLRLFAEG 165 A+ + +GK F SV+ L G +RLS +E +V L A G Sbjct: 119 AIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAAG 178 Query: 166 FLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 V EIA++L S T+S+ + + K GV ND+ L Y L Sbjct: 179 KSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELMQ 225 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 8/213 (3%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 + + +++ DDH ++ G+ + + VV + E+ I V++ DL M G Sbjct: 8 DKIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHG 67 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 G+ I+ ++ F ++ ++V + + L G V+K+ A L +A+ Sbjct: 68 ---MSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIR 124 Query: 122 ALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + G+++ P ++ + G +LSP+E +VL+L A+G EIA +L+ T Sbjct: 125 KVHAGEQYVPPEIAMRM-----GERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGT 179 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSPAD 214 + + KLGV + + + + Sbjct: 180 AKIHVANILTKLGVSDRTQAIVVAVRRGIIQIE 212 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 9/216 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + V+IADD ++ + + V+G ED + ++ V++ D+ MP Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPN-- 128 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGI I + +++LT + + A L G +LK P DL A+ + Sbjct: 129 -VDGIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVV 187 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDKRL------SPKESEVLRLFAEGFLVTEIAKKLNR 177 G+ SV+R L A + L + +E EVLRL AEG TEI + L+ Sbjct: 188 ASGEALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHV 247 Query: 178 SIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPA 213 S T+ + + KLG + L+ L A Sbjct: 248 SRGTLKTHVGRLLHKLGARDRAQLVIAAYESGLVTA 283 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 8/213 (3%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 ++I +DH ++ G+R+ L Q V GE D + L +++ DL +P Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGA--PTDLPKALA 121 G + + +KR +P++ ++ LT ++ + L +G LK A + L A+A Sbjct: 59 VMSGTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVA 118 Query: 122 ALQKGKKFTPESVSRLLEK---ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +++ G + ++ + + D LS +E EVL+L A+G EI ++L + Sbjct: 119 SVRDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIA 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 T+ + + KLGV + + Sbjct: 179 SGTVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 9/210 (4%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 V++ DDHP + G+ +++ + GE + + + +L+ + + D+SMPG Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVIDISMPGT-- 81 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 +G+ LIK + P L I++L+M++ L +G V+K A + L + Sbjct: 82 -NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVG 140 Query: 125 KGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS 178 +G+ + S L I+ +LS +E EVLRL GF EIA++L+ S Sbjct: 141 EGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLS 200 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSV 208 +KT+ + + KLG + ++ + Sbjct: 201 VKTVETHRAHIKEKLGFKEAGEMVRFAIDW 230 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 7/213 (3%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I DDH ++ G++ L + E + VVGE + L V++ D +P Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPD- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ + + ++ P +++++LT ++ ++ + G V+K DL +++ A Sbjct: 61 --VDGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRA 118 Query: 123 LQKGKKFTPESVSRLLEKISAGGYGDKR----LSPKESEVLRLFAEGFLVTEIAKKLNRS 178 + +G+ V L + DK L+ ++ ++RL A+G+ EIA+++ S Sbjct: 119 VARGEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMFLS 178 Query: 179 IKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 KT+ AM ++GV+N + S Sbjct: 179 EKTVKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 245 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 10/215 (4%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALIN-NLPKLDAHVLITDLSMPGD 62 + I +DH IV G+++ L + + V+ EF +++ +++ D+++PG Sbjct: 2 ITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPG- 60 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 DG+ L + IK+ +P II+LTM+ + D +G K ++L + Sbjct: 61 --MDGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKK 118 Query: 123 LQKGKKFTPESVSRLL------EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+K+ +SVS++L K S+G L+ +E EVL G EI KL Sbjct: 119 IYNGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLC 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 S +T+ + + + + K G++N + L+ + +L Sbjct: 179 ISTRTVENHRANILRKFGLKNTVELVKFAIENSLV 213 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 6/215 (2%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + +I+ADDH + G+R LE+ E + VV E D +++ + V++ DLSMPG Sbjct: 3 IRIILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMPDVVVLDLSMPG-- 60 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 +G I + P + II+L+M+++ + L L ++ +LK+ A +L A+ + Sbjct: 61 -MNGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCV 119 Query: 124 QKGKKFTPESVSRLL---EKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 K + +S ++ G L+P+E + RL G EI +L S K Sbjct: 120 FKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSK 179 Query: 181 TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADK 215 T+ + + M KL + N L+N+ + + Sbjct: 180 TVETYRLKVMKKLNISNIAQLVNHAVQEGIVGRPE 214 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 8/216 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 M M V++ DDH +V GIR L I V + E + + +++ D++M Sbjct: 1 MEGMRVLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAM- 59 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 DG+ + I P + +++L+M++ L G +LK A +L A+ Sbjct: 60 --DDMDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAI 117 Query: 121 AALQKGKKFTPESVSR-----LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 AA+ +G + +VSR +L + L+P+++E+L L G EIA++L Sbjct: 118 AAVMRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + S+KT+ + + M +LGV + LL + L Sbjct: 178 DLSVKTVEAHRAQIMERLGVRDIANLLLEAARRGLI 213 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 245 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 4/211 (1%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V++ADDH ++ G+ + L ++VVGE +D ALI + KL V++ D+SMP Sbjct: 2 TIRVVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 G+ I I I+VL+M+N + A+ D +G +LK+ + L +A+ Sbjct: 60 -RMSGLVAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKK 118 Query: 123 LQKGKKFTPESVSRLLEKI-SAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKT 181 + K P+ +++ L+ +E EV L G +IA+ L+ S+KT Sbjct: 119 VAANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKT 178 Query: 182 ISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 + + + KL + + L+ L Sbjct: 179 AENHRSNIYKKLNLSSSAELIRMAGKAGLLE 209 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 18/223 (8%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 + ++I DDH + +R LE + VVG ED + +L+ +++ DL MP Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLEMPN-- 440 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DGIT K IK +P + I+VL+ + ++ +G +LK +L + + + Sbjct: 441 -MDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLV 499 Query: 124 QKGKKFTPESVSRLLEKISAGGYGDK---------------RLSPKESEVLRLFAEGFLV 168 +G + + + + L+ +E E+L++ A+G Sbjct: 500 HRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRY 559 Query: 169 TEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 IA KL S T+ + + KLGV N + L Sbjct: 560 KTIASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 245 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 5/214 (2%) Query: 5 NVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKY 64 +++ DDH IV G R L+Q + VV E D ++ ++I DL+MPG Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPG--- 62 Query: 65 GDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 G+ +K I++ P+ I+V TM+ N A + +G V K P L + + Sbjct: 63 LGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVL 122 Query: 125 KGKKFTPESVSR--LLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTI 182 +G+ + L +++ L+P+E E+LRL IA L S KT+ Sbjct: 123 QGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTV 182 Query: 183 SSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD 216 ++ + KLGV +DI L+ + A+ + Sbjct: 183 ANTRYLIKAKLGVASDIELVLVALRQGILGAEGE 216 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 11/220 (5%) Query: 1 MNN-MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSM 59 MN+ + ++IADDH I G+ L + + +VG+ + L+ L ++A V++TDL M Sbjct: 1 MNHDIRLVIADDHEIFRDGLALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKM 60 Query: 60 PGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKA 119 P DGIT + + + P + II L+M + ++ +L+ +G +LK ++ +A Sbjct: 61 P---LMDGITATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEA 117 Query: 120 LAALQKGKKFTPESVSRLLEKI-------SAGGYGDKRLSPKESEVLRLFAEGFLVTEIA 172 + ++ + F S L + + +E E++RL + F EI Sbjct: 118 INSVYEDHIFYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIG 177 Query: 173 KKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 K+ S +T+ + + K+ V+N ++ + L Sbjct: 178 DKIFLSKRTVEGHRTRILEKMNVKNTAGVVVFALKNNLIS 217 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 8/216 (3%) Query: 1 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP 60 MN V+IADDHP+ IR L+ V+GE ++ ++ +++ D++MP Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMP 60 Query: 61 GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL 120 G+ + +K+ +P + +++L+++++ A L + +G +LK P D L Sbjct: 61 ---KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYL 117 Query: 121 AALQKGKKFTPESVSRLLEKISAGGYGDKR-----LSPKESEVLRLFAEGFLVTEIAKKL 175 AL ++ L L+P+E E++ G EI++ L Sbjct: 118 HALLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEAL 177 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLS 211 + T+ + K+ + KL + N + L Y L Sbjct: 178 IIAENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 9/215 (4%) Query: 2 NNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPG 61 V+I DDHPIV G + +E + + V GE + I + + ++I D+S+ Sbjct: 7 QKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISL-- 64 Query: 62 DKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALA 121 K G G+ LIK +K F + ++ ++M++ L G V KQ AP L KA+ Sbjct: 65 -KDGSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIY 123 Query: 122 ALQKGKKFTPESVSRLLEKIS------AGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKL 175 + KGK + +V+ + S + + LS +E EV EG IA+KL Sbjct: 124 QVLKGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKL 183 Query: 176 NRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 N S KT+ + +++ KL +EN AL + L Sbjct: 184 NLSSKTVETYRENIKHKLNLENATALTRHAIQWVL 218 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 9/214 (4%) Query: 3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGD 62 + V+I +D IV GI+ L+ +VGE D + + K +++ DL++P Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPDIVLMDLTLP-- 59 Query: 63 KYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 +G I+ IKR + ++ LT + +++ L +G +LK + L +A+ Sbjct: 60 -VMEGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGADGYLLKNASRDILFQAMQT 118 Query: 123 LQKGKKFTPESVSRLLEK------ISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLN 176 + G+++ +S LL LS +E +VL+L AEG +A+KL Sbjct: 119 VLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLC 178 Query: 177 RSIKTISSQKKSAMMKLGVENDIALLNYLSSVTL 210 S KT+ K + KLG + L+ + L Sbjct: 179 ISHKTVEKHKANLKRKLGTASTAELVTFAIEHGL 212 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 245 bits (626), Expect = 9e-64, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 12/218 (5%) Query: 4 MNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 +++A+D IV G+RK LE + V+ E D + + + V++ D+ MP Sbjct: 2 TRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMP--- 58 Query: 64 YGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAAL 123 DG+ + I I++LTM + A + + ++ G +LK P +L A+ + Sbjct: 59 RLDGLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVI 118 Query: 124 QKGKKFTPESVSRLLE---------KISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKK 174 G SV+R L + G L+P+E ++L L G IAK Sbjct: 119 ADGDAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKT 178 Query: 175 LNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSP 212 L + T+ +MKL EN + L + ++ Sbjct: 179 LGATESTVKGHVSRLLMKLDCENRVQLALIAHNAGIAS 216 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.213 0.752 Lambda K H 0.267 0.0651 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,328,045,068 Number of Sequences: 3077464 Number of extensions: 171333016 Number of successful extensions: 557246 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 23687 Number of HSP's successfully gapped in prelim test: 21094 Number of HSP's that attempted gapping in prelim test: 455584 Number of HSP's gapped (non-prelim): 52406 length of query: 216 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 93 effective length of database: 661,868,284 effective search space: 61553750412 effective search space used: 61553750412 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.7 bits) S2: 92 (39.4 bits)