401 c1rktA_ Probab=31.87   E-value=41  Score=15.18  Aligned_columns=41  Identities=27%

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             456999999999999987898898899999999838868998999999997478988768999
Q batch____         3 KTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYR   65 (171)
Q Consensus         3 ~~~~~~~~~~~~~~L~~~glR~T~~R~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR   65 (171)
                      +..-+.+++.+.+++.++|+.-                 +|.++|.+.+     ++|++|+|+
T Consensus        10 ~~~r~~Il~aA~~lf~~~G~~~-----------------~si~~Ia~~a-----gvs~~tiY~   50 (204)
T c1rktA_          10 DKRQAEILEAAKTVFKRKGFEL-----------------TTXKDVVEES-----GFSRGGVYL   50 (204)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSTT-----------------CCHHHHHHHH-----TSCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHCHHC-----------------CCHHHHHHHH-----CCCHHHHHC
T ss_conf             9999999999999999619200-----------------8899999995-----899999730