Phyre 2 alignment of P36943 with c2bpsA_

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Job Description | P36943
Confidence | 3.45% | Date | Wed Jan 25 15:20:51 GMT 2012
Rank | 64 | Aligned Residues | 29
% Identity | 10% | Template | c2bpsA_
PDB info | PDB header:ubiquitin | Chain: A: PDB Molecule:yukd protein; | PDBTitle: ubiquitin-like protein yukd of bacillus subtilis
Resolution | 2.7 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | V | K | L | N | V | D | K | D | F | S | L | K | D | S | S | L | E | M | L | Y | P | I | Y | D | T | P | T | N | M | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | I | D | I | T | I | D | L | . | K | H | Y | N | G | S | V | F | D | L | R | L | S | D | Y | H | P | V | K | K | V | I
Template Known Secondary structure |  |  |  |  |  |  |  |  | . | T | T | T | T |  |  |  |  |  |  |  |  |  | T | T | S | B | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . |  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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