Phyre 2 alignment of P36943 with c2yjlC_

Return to main results | Retrieve Phyre Job Id

Job Description | P36943
Confidence | 3.07% | Date | Wed Jan 25 15:20:51 GMT 2012
Rank | 77 | Aligned Residues | 31
% Identity | 19% | Template | c2yjlC_
PDB info | PDB header:lipid-binding protein | Chain: C: PDB Molecule:exoenzyme s synthesis protein b; | PDBTitle: structural characterization of a secretin pilot protein2 from the type iii secretion system (t3ss) of pseudomonas3 aeruginosa
Resolution | 1.81 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 221 | . | . | . | . | . | . | . |  | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |  | . | . | . | 250 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query Sequence |  | W | K | K | S | P | D | I | E | . | D | Y | Q | E | R | P | A | N | G | W | D | I | R | A | E | G | Y | L | . | P | A | W | P | Q
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | V | G | V | A | A | V | Q | A | S | A | W | Q | Q | V | A | A | G | V | D | E | R | V | R | L | V | R | R | D | C | F | P | N
Template Known Secondary structure |  |  | T | T |  |  | S |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions