Phyre 2 alignment of P36943 with c2zdiC_

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Job Description | P36943
Confidence | 2.91% | Date | Wed Jan 25 15:20:51 GMT 2012
Rank | 84 | Aligned Residues | 37
% Identity | 24% | Template | c2zdiC_
PDB info | PDB header:chaperone | Chain: C: PDB Molecule:prefoldin subunit alpha; | PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | L | K | D | S | S | L | E | M | L | Y | P | I | Y | D | T | P | T | N | M | L | F | T | Q | G | A | I | H | R | T | D | D | R | T | Q | S | N | I | G | F | G | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | I | E | E | E | K | P | E | I | L | V | P | I | . | . | . | . | G | A | G | S | F | L | K | G | V | I | V | D | K | . | N | N | A | I | V | S | V | G | S | G | Y
Template Known Secondary structure |  | T |  |  |  | S | S |  |  |  |  |  |  |  | . | . | . | . | S | S | S |  |  |  |  |  |  |  | S |  | T | . | T |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 54 | . | . | . | . | . | 60 | . | . | . | . | . | . |  |  |  |  | . | . | . | 70 | . | . | . | . | . | . | . | . | . |  | 80 | . | . | . | . | . | . | . | . | . | 90

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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