Phyre 2 alignment of P36943 with c3oq2A_

Return to main results | Retrieve Phyre Job Id

Job Description | P36943
Confidence | 3.12% | Date | Wed Jan 25 15:20:51 GMT 2012
Rank | 74 | Aligned Residues | 18
% Identity | 33% | Template | c3oq2A_
PDB info | PDB header:immune system | Chain: A: PDB Molecule:crispr-associated protein cas2; | PDBTitle: structure of a crispr associated protein cas2 from desulfovibrio2 vulgaris
Resolution | 1.35 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | E | I | Q | E | W | L | G | K | Y | G | T | A | R | V | K | L | N | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | R | R | I | A | K | A | C | Q | D | Y | G | Q | . | R | V | Q | Y | S | V
Template Known Secondary structure |  |  |  |  |  |  |  |  | G | G | G |  |  | . |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . |  | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions