Phyre 2 alignment of P36943 with c3k1lA_

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Job Description | P36943
Confidence | 3.62% | Date | Wed Jan 25 15:20:51 GMT 2012
Rank | 61 | Aligned Residues | 34
% Identity | 29% | Template | c3k1lA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:fancl; | PDBTitle: crystal structure of fancl
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | R | A | E | G | Y | L | P | A | W | P | Q | L | G | A | S | L | M | Y | E | Q | Y | Y | G | D | E | V | G | L | F | G | K | D | K | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | R | L | K | L | Y | L | P | H | H | P | A | L | H | G | F | Q | L | Y | V | Q | . | E | S | L | E | Y | K | L | Y | T | S | A | N | L
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | T | T | S |  | T | T |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  | T | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |  | . | . | . | . | . | . | . | . | 70 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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