112 c1ynuA_ Probab=99.95   E-value=1.5e-24  Score=166.94  Aligned_columns=298  Identities=16%

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCC----CCCCEEEECCH-HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEE
Q ss_conf             510557982899999999999828----99648999894-9999999996124897689714405999999998749649
Q batch____        41 GLTPGLNQPRVTQRVEQVLADAFH----AQAAALVQGAG-TGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTL  115 (361)
Q Consensus        41 g~~~~~~~~~~~~~~e~~lA~~~g----a~~~~iv~~sG-t~Ai~~al~~~~~~Gd~vi~~~~~~~~~~~~~~~~~g~~~  115 (361)
                      +|....|.++.++.+-+.+.+..|    .++..|++++| ++++.+++.++++|||+|++....|......+....|.++
T Consensus        71 ~Y~~~~G~~~lr~aia~~l~~~~~~~~~~~~e~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~~  150 (417)
T c1ynuA_          71 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEI  150 (417)
T ss_dssp             HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEE
T ss_conf             79986799899999999999860899988855678808889999999998537898899858972788999998189849


Q ss_pred             EECCCC-------CHHHHHHHHHC-----CCCEEEEEECCCCCCCCCCC---HHHHHHHHHHCCCEEEEECCCCCCCCCC
Q ss_conf             985788-------86787765202-----78708997047888753178---9999999972893799988846774336
Q batch____       116 ITVDFN-------DLSALKQVVDE-----QQPDAALVQHTRQQPQDSYV---LADVLATLRAAGVPALTDDNYAVMKVAR  180 (361)
Q Consensus       116 ~~v~~~-------d~~~l~~~~~~-----~~t~lv~~~~~~n~~G~~~d---l~~i~~~a~~~g~~livD~a~a~~~~~~  180 (361)
                      +.++.+       |...+++.+.+     ++++++++.+++||||.+.+   +.+|.++|+++|+++++|++|+...+..
T Consensus       151 v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~~~iI~De~y~~l~~~~  230 (417)
T c1ynuA_         151 VPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS  230 (417)
T ss_dssp             EEECCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHCCC
T ss_conf             99743842244669889999997433216980899942578884143259999999999875591899967872000288


Q ss_pred             CC-----------CCCCCCEEEEECHHCCC--CCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHH--HHHHHHH
Q ss_conf             80-----------00523276640300167--885299982999999999997616898897899999999--9877999
Q batch____       181 IG-----------CECGANVSTFSCFKLFG--PEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRG--LVFAPVM  245 (361)
Q Consensus       181 ~~-----------~~~g~d~~~~S~~K~~g--~~g~G~l~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~--l~~~~~~  245 (361)
                      ..           ...+..+++.|++|.++  |.++|+++++++.+.++...........+.....+....  .......
T Consensus       231 ~~~~s~~~~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  310 (417)
T c1ynuA_         231 PSFISVMEVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNY  310 (417)
T ss_dssp             SCCCCHHHHTTCCCGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH
T ss_conf             77788466431156689889994060552034032126874868999999987310368888999999852261048999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE-EEEEECCCC-------HHHHHHHHHHC-CEEEEECCCCCCCCCC
Q ss_conf             99999989999999973030124421036778977-999817855-------89999999875-9088404543345677
Q batch____       246 HAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKV-LIVEFHQPI-------AARVLEEAQKR-GALPYPVGAESKYEIP  316 (361)
Q Consensus       246 ~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~-l~~~l~~~~-------~~~~~~~l~~~-gi~~~~g~~~~~~~~~  316 (361)
                      ++...+.....++.+.......  +..+..|.+++ +|++++...       ..++...+.+. |+.+.||..|....  
T Consensus       311 ~~~~~~~~~~~~~~~~~~l~~~--g~~~~~p~~g~~~~i~l~~~~~~~~~~~~~~~~~~ll~e~gV~v~pg~~f~~~~--  386 (417)
T c1ynuA_         311 IAENHKRLKQRQKKLVSGLQKS--GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTE--  386 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--TCEECCCCSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTTCEECEETTTTTCSS--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC--CCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCC--
T ss_conf             9999999899999999997627--988946886128998775324654445789999999997596998072208789--


Q ss_pred             CCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHH---HHHHHHHHCC
Q ss_conf             1012210002576621246447896067880468---9999976324
Q batch____       317 PLFYRLSGTFRQANPQSEHCAIRINPNRSGEETV---LRILRESIAS  360 (361)
Q Consensus       317 p~~~~~~~~~~~~~~~~~~~~iRls~~~~~~e~~---id~L~~ala~  360 (361)
                                        .+.||||.+..+.|.+   +++|+++|..
T Consensus       387 ------------------~g~iRis~a~~~~~~l~~al~rl~~~l~e  415 (417)
T c1ynuA_         387 ------------------PGWFRVCFANLPERTLDLAMQRLKAFVGE  415 (417)
T ss_dssp             ------------------TTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCEEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf             ------------------87799974689999999999999997310