Phyre 2 alignment of P0AES4 with c3somO_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AES4
Confidence | 14.46% | Date | Thu Jan 5 11:24:06 GMT 2012
Rank | 88 | Aligned Residues | 47
% Identity | 23% | Template | c3somO_
PDB info | PDB header:oxidoreductase | Chain: O: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; | PDBTitle: crystal structure of human mmachc
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |  | . | . | . |  |  |  |  |  |  |  |  |  | . | 80 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | V | R | D | G | L | K | P | V | H | R | R | V | L | Y | A | M | N | V | L | G | N | D | W | N | K | A | Y | K | K | S | A | R | V | V | G | D | V | I | G | . | K | Y | H | . | . | . | . | . | . | . | . | . | P | H | G | D | S | A | V | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | R | E | S | L | P | E | L | Q | I | E | I | I | A | D | . | Y | E | V | . | . | H | P | N | R | R | P | K | I | L | A | Q | T | A | A | H | V | A | G | A | A | Y | Y | Y | Q | R | Q | D | V | E | A | D | P | W | G | N | Q | R | I | S
Template Known Secondary structure |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | . | T |  | B | . | . |  | T | T | S |  | B | S | S |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  | G | G | G | S | T | T |  |  |  |  | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |  | . | . | . |  |  | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions