Phyre 2 alignment of P41070 with c3n4pA_

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Job Description | P41070
Confidence | 1.80% | Date | Thu Jan 5 12:01:26 GMT 2012
Rank | 48 | Aligned Residues | 15
% Identity | 47% | Template | c3n4pA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:terminase subunit ul89 protein; | PDBTitle: human cytomegalovirus terminase nuclease domain
Resolution | 2.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | M | R | N | I | N | V | I | T | V | L | S | V | P | G | K | T | V | S | D | D | F | M | H | A | V | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | Q | N | L | . | . | . | . | . | . | . | . | . | . | . | H | R | S | D | D | L | I | I | A | V | I
Template Known Secondary structure |  |  |  | T |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 624 | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | 630 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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