Phyre 2 alignment of P41070 with c1y9jA_

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Job Description | P41070
Confidence | 1.15% | Date | Thu Jan 5 12:01:26 GMT 2012
Rank | 95 | Aligned Residues | 32
% Identity | 31% | Template | c1y9jA_
PDB info | PDB header:protein transport | Chain: A: PDB Molecule:sec1 family domain containing protein 1; | PDBTitle: solution structure of the rat sly1 n-terminal domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | N | M | R | N | I | N | V | I | T | V | L | S | V | P | G | K | T | . | . | . | . | . | V | S | D | D | F | M | H | A | V | L | S | N | C | A | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | M | L | N | F | N | V | P | H | V | K | N | S | P | G | E | P | V | W | K | V | L | I | Y | D | R | F | G | Q | D | I | I | S | P | L | L | S
Template Known Secondary structure |  |  |  | T | T |  |  |  | S |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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