Phyre 2 alignment of P41070 with c3cw15_

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Job Description | P41070
Confidence | 1.85% | Date | Thu Jan 5 12:01:26 GMT 2012
Rank | 45 | Aligned Residues | 24
% Identity | 25% | Template | c3cw15_
PDB info | PDB header:splicing | Chain: 5: PDB Molecule:small nuclear ribonucleoprotein g; | PDB Fragment:residues 1-215; PDBTitle: crystal structure of human spliceosomal u1 snrnp
Resolution | 5.49 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | D | F | M | H | A | V | L | S | N | C | A | T | R | I | V | L | P | A | P | E | K | F | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | P | F | M | N | L | V | I | D | E | C | V | E | M | A | T | S | G | Q | Q | N | N | I | G
Template Known Secondary structure |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  | B | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 635 | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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