Phyre 2 alignment of Q46796 with c1e9zA_

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Job Description | Q46796
Confidence | 3.83% | Date | Thu Jan 5 12:34:16 GMT 2012
Rank | 21 | Aligned Residues | 35
% Identity | 20% | Template | c1e9zA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:urease subunit alpha; | PDBTitle: crystal structure of helicobacter pylori urease
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | I | D | K | G | Y | E | R | I | T | L | Q | L | D | L | G | G | E | S | P | G | Y | L | E | K | D | K | H | Y | R | E | A | D | A | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | N | E | G | K | K | A | V | S | V | K | V | K | N | V | G | D | R | P | V | Q | I | G | S | H | F | H | F | F | E | V | N | R | C | L
Template Known Secondary structure |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  | T | T | S |  | G | G | G | S |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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