Phyre 2 alignment of Q46796 with d1pjca2

Return to main results | Retrieve Phyre Job Id

Job Description | Q46796
Confidence | 1.65% | Date | Thu Jan 5 12:34:16 GMT 2012
Rank | 66 | Aligned Residues | 50
% Identity | 26% | Template | d1pjca2
SCOP info | Flavodoxin-like | Formate/glycerate dehydrogenase catalytic domain-like | L-alanine dehydrogenase-like
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | R | E | A | K | V | N | E | L | D | E | T | L | S | T | T | R | L | N | H | L | I | D | K | G | Y | E | R | I | T | L | Q | L | D | L | G | G | E | S | P | G | Y | L | E | K | D | K | H | Y | R | E | A | D | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | K | E | I | K | N | Q | E | F | R | V | G | L | S | P | S | S | V | R | T | L | V | E | A | G | H | . | T | V | F | I | E | T | Q | A | . | G | I | G | A | G | F | . | . | A | D | Q | D | Y | V | Q | A | G | A
Template Known Secondary structure |  |  |  |  |  | S | T | T |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | T | T | T |  | . |  |  |  |  |  | T | T | T | . | T | G | G | G | T |  | . | . |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |  | . | . | . | . | . | . | . | . |  | 40 | . | . | . | . | . |  |  | . | . | . | . | 50 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions