149 c3snhA_ Probab=99.21   E-value=4e-09  Score=76.64  Aligned_columns=235  Identities=20%

Q ss_pred             HHHHHHHHHHCC-----------CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEE--------------
Q ss_conf             999999974012-----------5957999818889998999998588410236753441103899--------------
Q batch____        23 ERILQQINQLTH-----------YEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRF--------------   77 (287)
Q Consensus        23 ~~~~~~l~~l~~-----------~~~~Iai~G~~gaGKSTLiNaL~G~~~~~~~~~~~tT~~~~~~--------------   77 (287)
                      ++++..+++|.+           .-|.|+|+|.-++||||+++++.|..+.|.|-   |||.+...              
T Consensus         2 ~~Li~~in~LqD~l~~lG~~~~i~LPqiVVvG~QSsGKSSvlEai~g~~flprg~---~TR~p~~i~l~~~~~~~~~~~~   78 (652)
T c3snhA_           2 EDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGS---GTRRPLVLQLVNATTEYAEFLH   78 (652)
T ss_dssp             TTHHHHHHHHHHHHHTTTCCSSSCCCEEEEEECTTCCHHHHHHHHHTSCCSCSSC---CCCSCEEEEEEECSSCEEECTT
T ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCC---CCCCCEEEEEEECCCCCEEEEE
T ss_conf             0179899999999987299987889818998889887999988761874277999---7126489999857986078986


Q ss_pred             -----------------------------------EEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             -----------------------------------995489179999754657653103678888887420233048999
Q batch____        78 -----------------------------------RLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLI  122 (287)
Q Consensus        78 -----------------------------------~~~~~~~~i~l~D~pg~~~~~~~~~~~~~~~~~~~~~~~~i~~v~  122 (287)
                                                         ....+-..+.++|+||+-...................-..|++|+
T Consensus        79 ~~~~~~~d~~~i~~~i~~~~~~~~~~~s~~~i~l~i~~p~~~~LtlvDLPGl~~~~~~~~i~~lv~~yi~~~~~IILaV~  158 (652)
T c3snhA_          79 CKGKKFTDFEEVRLEIEAETDRVTKGISPVPINLRVYSPHVLNLTLVDLPGMTKPDIEFQIRDMLMQFVTKENCLILAVS  158 (652)
T ss_dssp             TCSCCBCCHHHHHHHHHHHHHHTCCCCCSCCCCCEEEESSSCSEEEEECCCCCCCHHHHHHHHHHHHHHHSTTEEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             38754289899999999998764147786727999950897641787678987578478999999998269881999996


Q ss_pred             ECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf             77986988899999998851179808999887666784023320365777557888989886228883699964687579
Q batch____       123 KADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWG  202 (287)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~nk~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsa~~~~g  202 (287)
                      .++.....+ ..+-........+.+.+.|+||.|.+.+...          ..............+.+.+..-+......
T Consensus       159 ~a~~D~ans-~~l~lar~~Dp~g~RTiGVlTK~Dl~~~g~~----------~~~il~g~~~~L~lGy~~v~nr~~~~~~~  227 (652)
T c3snhA_         159 PANSDLANS-DALKVAKEVDPQGQRTIGVITKLDLMDEGTD----------ARDVLENKLLPLRRGYIGVVNRSQKDIDG  227 (652)
T ss_dssp             ETTSCSTTC-HHHHHHHHHCSSSSSCCCEEECSTTSCTTCC----------CHHHHTTCSSCCSSCCEEECCCCCCCSSS
T ss_pred             ECCCCHHHH-HHHHHHHHHCCCCCCEEEEECCCCCCCCCHH----------HHHHHCCCCCCCCCCCEEEECCCHHHHHC
T ss_conf             278987665-8999999719788815998415012766012----------89996399864557707887699688321


Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             788999999851156544566542257888899998557899999999998830335648999999999999999886
Q batch____       203 LRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVAR  280 (287)
Q Consensus       203 l~~L~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~r~~i~~~~r  280 (287)
                      -..+.++......-=...+.....................+...+..         .+|.....+-..+++.-.++.+
T Consensus       228 ~~s~~e~~~~E~~fF~~~~~~~~~~~r~Gi~~L~~~L~~lL~~~i~~---------~lP~i~~~i~~~l~~~~~~l~~  296 (652)
T c3snhA_         228 KKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRD---------TLPGLRNKLQSQLLSIEKEVEE  296 (652)
T ss_dssp             SCCHHHHHHHHHHHHHTCHHHHTTTTTSSHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHH
T ss_conf             59989999999998616998655532039799999999999999998---------7178999999999999999986