284 c1tndA_ Probab=98.11   E-value=0.00012  Score=47.89  Aligned_columns=170  Identities=13%

Q ss_pred             EEEEECCCCCCHHHHHHHHH------------------------------------------------------------
Q ss_conf             79998188899989999985------------------------------------------------------------
Q batch____        38 VIGIMGKTGAGKSSLCNALF------------------------------------------------------------   57 (287)
Q Consensus        38 ~Iai~G~~gaGKSTLiNaL~------------------------------------------------------------   57 (287)
                      +|.++|..++||||+++-+-                                                            
T Consensus         5 kiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   84 (323)
T c1tndA_           5 KLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADTI   84 (323)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHHTTTS
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             99997389888889999999996789998999987999999999999999999987099988821368799987301345


Q ss_pred             -------------------------------------------------CCCCCCCCC----CCCCCCEEEEEEEEECCE
Q ss_conf             -------------------------------------------------884102367----534411038999954891
Q batch____        58 -------------------------------------------------AGEVSPVSD----VAACTRDPLRFRLQIGEH   84 (287)
Q Consensus        58 -------------------------------------------------G~~~~~~~~----~~~tT~~~~~~~~~~~~~   84 (287)
                                                                       ..+..|+..    ....|..+....+..++.
T Consensus        85 ~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~~~~  164 (323)
T c1tndA_          85 EEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDL  164 (323)
T ss_dssp             CTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEEETTE
T ss_pred             CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCE
T ss_conf             62225989999999985698999998735410422224566766787415454778644589853502417999973570


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC-----------CCCHHHHHHHHHHHH--HCCCCEEEEE
Q ss_conf             799997546576531036788888874202330489997798-----------698889999999885--1179808999
Q batch____        85 FMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADD-----------RALATDEHFYRQVIG--EAYRHKMLFV  151 (287)
Q Consensus        85 ~i~l~D~pg~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~vi~v  151 (287)
                      .+.++|+.|       ..............++.++||++.++           -.......++..+..  .....|++++
T Consensus       165 ~~~~~DvgG-------q~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~iil~  237 (323)
T c1tndA_         165 NFRMFDVGG-------QRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLF  237 (323)
T ss_dssp             EEEEEEECC-------SHHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCEEEEE
T ss_pred             EEEEEECCC-------CCCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEE
T ss_conf             488997789-------8743323688736998899997811414422256740358999999999827968779978999


Q ss_pred             EECCCCCCCC-------------HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             8876667840-------------23320365777557888989886228883699964687579788999999851
Q batch____       152 ISQSDKAEPT-------------SGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCL  214 (287)
Q Consensus       152 ~nk~D~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vsa~~~~gl~~L~~~i~~~l  214 (287)
                      +||.|.+...             .+.........-....-.............+..++|....++......+.+.+
T Consensus       238 lNK~Dif~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d~~~i~~v~~~v~~~i  313 (323)
T c1tndA_         238 LNKKDVFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDII  313 (323)
T ss_dssp             EECHHHHHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHH
T ss_conf             3255899876044883440678899789899999999999985237789738999985110689999999999999