479 c3cu2A_ Probab=90.01   E-value=1.4  Score=22.94  Aligned_columns=164  Identities=15%

Q ss_pred             HHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCHHHHHCHHHHHHHHHHHHHHCC
Q ss_conf             32333115788800899716998999999999997699899963677782020376651643085799999999998569
Q batch____        54 SRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVD  133 (321)
Q Consensus        54 ~~~~~~~~~~~~p~~vQl~g~~p~~~~~aa~~~~~~G~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~  133 (321)
                      +...+-..-....+...|...|.-.+.+..+.+.++|+|.+.+-.--.+ ++-+-.+|....+..+              
T Consensus         2 ~~~~~~~~m~k~kIspSil~ad~~~l~~~i~~l~~~g~~~lHiDVMDG~-FVpnitfg~~~i~~ir--------------   66 (235)
T c3cu2A_           2 SKLSLIQQLKQQKLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQ-FSSLFTVGAIGIKYFP--------------   66 (235)
T ss_dssp             CHHHHHHHHTTCCEEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSS-SSSCBCBCTHHHHTSC--------------
T ss_pred             CHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCC-CCCCCCCCHHHHHHHC--------------
T ss_conf             6778888531264516365189899999999999759989999834184-1785334889999611--------------


Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEC--------------------------------------------
Q ss_conf             866102552178998889999999985299899981--------------------------------------------
Q batch____       134 VPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIH--------------------------------------------  169 (321)
Q Consensus       134 ~~~~vk~r~~~~~~~~~~~~~~~~l~~~g~~~i~vh--------------------------------------------  169 (321)
                      ..+++-+.+-...    ...+++.+.++|+|.+++|                                            
T Consensus        67 t~~~~DvHLMV~~----P~~~i~~~~~aGad~I~vH~Ea~~~~~~~i~~i~~~~~~~~~~~~g~~~GialnP~Tp~~~l~  142 (235)
T c3cu2A_          67 THCFKDVHLXVRN----QLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELE  142 (235)
T ss_dssp             TTSEEEEEEECSC----HHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGT
T ss_pred             CCCCEEEEEECCC----HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
T ss_conf             5684178773169----899999998639988999503568989999998642232234325944789966998988999


Q ss_pred             ---------------CCCCCCCCCCCCCHHHHHHHHHH-----CCCCEEEECCCCCHHHHHHHHHCC-CCCEEEECCHHH
Q ss_conf             ---------------78512378888568999999974-----599699987899999999999603-998898731763
Q batch____       170 ---------------GRTRACLFNGEAEYDSIRAVKQK-----VSIPVIANGDITDPLKARAVLDYT-GADALMIGRAAQ  228 (321)
Q Consensus       170 ---------------~r~~~~~~~~~~~~~~i~~i~~~-----~~ipvi~nG~i~s~~da~~~l~~~-g~d~VmigR~~l  228 (321)
                                     ++...|...+. .++-++++++.     .++.+-..||| +.+.+..+.+.+ |+|.+-.|+++.
T Consensus       143 ~~l~~vD~VlvMtV~PGfgGq~f~~~-~~~KI~~l~~~~~~~~~~~~I~VDGGI-~~~~~~~~~~agag~d~iV~GS~iF  220 (235)
T c3cu2A_         143 PYLDQIDVIQLLTLDPRNGTKYPSEL-ILDRVIQVEKRLGNRRVEKLINIDGSX-TLELAKYFKQGTHQIDWLVSGSALF  220 (235)
T ss_dssp             TTTTTCSEEEEESEETTTTEECCHHH-HHHHHHHHHHHHGGGGGGCEEEEESSC-CHHHHHHHHHSSSCCCCEEECGGGG
T ss_pred             HHHHHCCEEEEEEECCCCCCCCCCHH-HHHHHHHHHHHHHHCCCCCEEEEECCC-CHHHHHHHHHCCCCCCEEEECHHHH
T ss_conf             99852596699744489887535589-999999999986533998289997799-9567889971379988899603661


Q ss_pred             CCCCHHHHHHH
Q ss_conf             18727999984
Q batch____       229 GRPWIFREIQH  239 (321)
Q Consensus       229 ~nP~lf~~~~~  239 (321)
                      .+ .+-..++.
T Consensus       221 ~~-d~~~~i~~  230 (235)
T c3cu2A_         221 SG-ELKTNLKV  230 (235)
T ss_dssp             SS-CHHHHHHH
T ss_pred             CC-CHHHHHHH
T ss_conf             76-47999999