54 c1vrdA_ Probab=99.75   E-value=8.8e-16  Score=119.12  Aligned_columns=203  Identities=20%

Q ss_pred             EE-CCEEECCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCEEHHHHHCCCCHHHHHHHC---------CCCCCEEEEEE
Q ss_conf             12-767646956848878987089999999719959996998408886068013233311---------57888008997
Q batch____         2 RI-GQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH---------IDEPGIRTVQI   71 (321)
Q Consensus         2 ~i-G~~~l~nri~lAPM~g~td~~fr~~~~~~G~~l~~temi~a~~~~~~~~~~~~~~~~---------~~~~~p~~vQl   71 (321)
                      ++ ++++++.||+.|||.+.|+..+...+++.|.--+++...+...+.............         ..........-
T Consensus        29 ~~~~~~~l~~Pi~~apM~g~s~~~la~a~a~~g~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (321)
T c1vrdA_          29 RLTRQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQARQVSIVKKTIMSVIEHPNAARDEKGRLLVGAA  108 (321)
T ss_dssp             ESSSSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHTCCHHHHTCTTCCBCTTSCBCCEEE
T ss_pred             EECCCCEECCCEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
T ss_conf             97158610334585487688898999999988971773267998999999998897667655320125534452021142


Q ss_pred             ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCHHHHHCHHHHHHHHHHHHHHCC-CCCCEEEEECCCCCHHH
Q ss_conf             16998999999999997699899963677782020376651643085799999999998569-86610255217899888
Q batch____        72 AGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVD-VPVTLKIRTGWAPEHRN  150 (321)
Q Consensus        72 ~g~~p~~~~~aa~~~~~~G~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~-~~~~vk~r~~~~~~~~~  150 (321)
                      .+..+++..++.... ++|.+.+.+|+++.               .+....+.++.+++... .|+.+|.-.        
T Consensus       109 ~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~---------------~~~~~~~~i~~l~~~~~~~pvivk~v~--------  164 (321)
T c1vrdA_         109 VGTSPETMERVEKLV-KAGVDVIVIDTAHG---------------HSRRVIETLEMIKADYPDLPVVAGNVA--------  164 (321)
T ss_dssp             ECSSTTHHHHHHHHH-HTTCSEEEECCSCC---------------SSHHHHHHHHHHHHHCTTSCEEEEEEC--------
T ss_pred             CCCCHHHHHHHHHHH-HCCCCEEEECCCCC---------------CCHHHHHHHHHHHHHCCCEEEEECCCC--------
T ss_conf             678975899999997-34998489717888---------------820268899999971891069975779--------


Q ss_pred             HHHHHHHHHHCCCCEEEE------CCCCCCCCCCCCCCHHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHHCCCCCEE
Q ss_conf             999999998529989998------1785123788885689999999745---9969998789999999999960399889
Q batch____       151 CEEIAQLAEDCGIQALTI------HGRTRACLFNGEAEYDSIRAVKQKV---SIPVIANGDITDPLKARAVLDYTGADAL  221 (321)
Q Consensus       151 ~~~~~~~l~~~g~~~i~v------h~r~~~~~~~~~~~~~~i~~i~~~~---~ipvi~nG~i~s~~da~~~l~~~g~d~V  221 (321)
                      ..+.++.+.++|+|+|.+      +..+......+.+.+..+..+++..   ++|||++|||+|..|+.++|.. |||+|
T Consensus       165 s~~~A~~a~~~Gad~I~v~g~gG~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipIia~GGI~~g~dv~kaLal-GAdaV  243 (321)
T c1vrdA_         165 TPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA-GAESV  243 (321)
T ss_dssp             SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEE
T ss_pred             CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHC-CCCEE
T ss_conf             99999999976998999807788766654335656773899999999830189589996786899999999973-88876


Q ss_pred             EECCHHHC
Q ss_conf             87317631
Q batch____       222 MIGRAAQG  229 (321)
Q Consensus       222 migR~~l~  229 (321)
                      |+||.++.
T Consensus       244 ~iG~~fl~  251 (321)
T c1vrdA_         244 MVGSIFAG  251 (321)
T ss_dssp             EESHHHHT
T ss_pred             EECHHHHH
T ss_conf             76818762