272 c1lm1A_ Probab=97.70   E-value=0.0014  Score=41.87  Aligned_columns=139  Identities=16%

Q ss_pred             EEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCHHHHHCHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCH
Q ss_conf             97169989999999999976998999636777820203766516430857999999999985698-66102552178998
Q batch____        70 QIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDV-PVTLKIRTGWAPEH  148 (321)
Q Consensus        70 Ql~g~~p~~~~~aa~~~~~~G~d~IdiN~gcP~~~~~~~~~G~~l~~~~~~~~eiv~~v~~~~~~-~~~vk~r~~~~~~~  148 (321)
                      ||-|.........++.+ .+|.+-|     +|.+..-        ....+=+.+.+..++.+-+. +++||+-....   
T Consensus       946 ~Lpg~KV~~~IA~~R~~-~pGv~li-----SPpphHd--------iYSIEDLaqlI~~Lk~~n~~a~V~VKlv~~~g--- 1008 (1475)
T c1lm1A_         946 QLPGKKVSEYIAMLRRS-KPGVTLI-----SPPPHHD--------IYSIEDLAQLIYDLHQINPEAQVSVKLVAEIG--- 1008 (1475)
T ss_dssp             EECGGGCCHHHHHHHTS-CTTCCEE-----CCSSCTT--------CSSHHHHHHHHHHHHHHCTTSEEEEEEECCTT---
T ss_pred             CCCCCCCCHHHHHHHCC-CCCCCCC-----CCCCCCC--------CCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC---
T ss_conf             36701078888987089-9998889-----9998575--------47899999999999852888856899862287---


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHH--------HHHHHHHC-------CCCEEEECCCCCHHHHHHHH
Q ss_conf             8899999999852998999817851237888856899--------99999745-------99699987899999999999
Q batch____       149 RNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDS--------IRAVKQKV-------SIPVIANGDITDPLKARAVL  213 (321)
Q Consensus       149 ~~~~~~~~~l~~~g~~~i~vh~r~~~~~~~~~~~~~~--------i~~i~~~~-------~ipvi~nG~i~s~~da~~~l  213 (321)
                        .-.++.-+.++++|.|++.|....-.-.+....+.        ++++-+.+       .+++++.|++.|..|+..++
T Consensus      1009 --vgtia~gvaka~ad~I~IsG~dGGTGAap~~sik~~GlP~e~gl~e~~~~L~~~gLR~rv~l~adGgl~t~~Dv~~a~ 1086 (1475)
T c1lm1A_        1009 --IGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAA 1086 (1475)
T ss_dssp             --HHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHH
T ss_pred             --HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf             --235544322037988998189887531037887406870422489999999983996558999838216999999999


Q ss_pred             HCCCCCEEEECCHHH
Q ss_conf             603998898731763
Q batch____       214 DYTGADALMIGRAAQ  228 (321)
Q Consensus       214 ~~~g~d~VmigR~~l  228 (321)
                      .. |||.|.+|+++|
T Consensus      1087 ~L-GAd~~~~gt~~l 1100 (1475)
T c1lm1A_        1087 LM-GAEEYGFGSIAM 1100 (1475)
T ss_dssp             HH-TCSEEECSHHHH
T ss_pred             HC-CCCEEHHHHHHH
T ss_conf             73-987531658999