Phyre 2 alignment of P0A7F3 with c2yucA_

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Job Description | P0A7F3
Confidence | 12.83% | Date | Thu Jan 5 11:05:33 GMT 2012
Rank | 100 | Aligned Residues | 43
% Identity | 26% | Template | c2yucA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:tnf receptor-associated factor 4; | PDBTitle: solution structure of the traf-type zinc finger domains2 (102-164) from human tnf receptor associated factor 4
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | V | L | V | C | P | N | S | N | C | I | S | H | A | E | P | V | S | S | S | F | A | V | R | K | R | A | N | D | I | A | L | K | C | K | Y | C | E | K | E | F | S | H | N | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | I | P | C | P | N | . | R | C | P | M | K | L | S | R | R | D | L | P | A | H | L | Q | H | D | C | P | K | R | R | L | K | C | E | F | C | G | C | D | F | S | G | E | A
Template Known Secondary structure |  |  |  | B |  | T | T | . |  |  | S |  | B |  |  | S | S | S | S | T | T | T | T | T | T | S |  | T | T | S |  |  |  |  | S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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