100 c3nlcA_ Probab=99.43   E-value=2.6e-12  Score=94.09  Aligned_columns=185  Identities=16%

Q ss_pred             CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf             76654577008998893899999999997449975999818985443234666562056454312244642011111155
Q batch____        24 AKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIE  103 (548)
Q Consensus        24 ~~~~~~~~~DVvIIGgGi~Gls~A~~Lse~~pg~~V~VlEk~~~~g~~sS~~~~Nsg~ih~g~~~~~y~~~~~~~~~~~~  103 (548)
                      .......+.+|||||||++|+++|..|++  .|.+|+||||.+.+|+.+.........................+.....
T Consensus        86 ~~~~~~~~~~~vVVGaG~AGL~AA~~La~--~G~~V~vlE~~~~~GGr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (534)
T c3nlcA_          86 AKAPENLTERPIVIGFGPCGLFAGLVLAQ--XGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDG  163 (534)
T ss_dssp             CCCCTTCCCCCEEECCSHHHHHHHHHHHH--TTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCC
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCHHCCCC
T ss_conf             66765668867998896899999999997--6981999978887564300024555642014334443101100000257


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHH
Q ss_conf             55677754256799999887404455543211038817993799899999999999885788874134029999986520
Q batch____       104 KAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAP  183 (548)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~l~~a~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P  183 (548)
                      +.................................                                              
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------------------------------------------  197 (534)
T c3nlcA_         164 KLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSK----------------------------------------------  197 (534)
T ss_dssp             CCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSS----------------------------------------------
T ss_pred             CEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCCCC----------------------------------------------
T ss_conf             5011000101567899999997699830024785----------------------------------------------


Q ss_pred             HHCCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCEEEEEEEECCCCCEEEEECCE
Q ss_conf             31257885321689994688145599999999999986299299948834546974896699999962578537999888
Q batch____       184 LVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKF  263 (548)
Q Consensus       184 ~i~~~~~~~~~~aa~~~p~~~~vd~~~l~~~L~~~l~~~~gv~i~~~t~V~~I~~~~dg~~~V~v~~~~tG~~~~i~Ak~  263 (548)
                                       +..+..........+.+.+... |+++++++.|+++..+++....+..     ....+++|+.
T Consensus       198 -----------------~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~~~v~~~~~~~~~~~~~~~-----~~~~~i~A~a  254 (534)
T c3nlcA_         198 -----------------PHIGTFKLVTXIEKXRATIIEL-GGEIRFSTRVDDLHXEDGQITGVTL-----SNGEEIKSRH  254 (534)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESSSBEEEEEE-----TTSCEEECSC
T ss_pred             -----------------CCCCCCCCHHHHHHHHHHHHHC-CCEEEECCEEEECCCCCCEEEEEEE-----CCCEEEECCE
T ss_conf             -----------------2313222036899999999868-9799958786101036640254673-----2760897787


Q ss_pred             EEECCCCCCHHHHHHC
Q ss_conf             9996886757889981
Q batch____       264 VFIGAGGAALKLLQES  279 (548)
Q Consensus       264 VIiaAGg~s~~Ll~~s  279 (548)
                      ||+|+|+++-...+..
T Consensus       255 VIlAtGg~a~~~~~~l  270 (534)
T c3nlcA_         255 VVLAVGHSARDTFEXL  270 (534)
T ss_dssp             EEECCCTTCHHHHHHH
T ss_pred             EEECCCCCHHHHHHHH
T ss_conf             9982885324678788