BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1048 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteri... 2095 0.0 UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepI... 664 0.0 UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum ... 634 e-180 UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID... 417 e-115 UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech7... 399 e-109 UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=... 389 e-106 UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus as... 389 e-106 UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enteroba... 382 e-104 UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus lu... 382 e-104 UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Provide... 380 e-103 UniRef50_A7FLH1 Nuclease SbcCD, C subunit n=39 Tax=Enterobacteri... 376 e-102 UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter ... 375 e-102 UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=... 370 e-100 UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Provide... 369 e-100 UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella ch... 361 9e-98 UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx1... 347 1e-93 UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepI... 344 1e-92 UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 344 1e-92 UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE 344 1e-92 UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms Re... 337 2e-90 UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunic... 333 3e-89 UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivi... 324 1e-86 UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlan... 323 2e-86 UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 321 1e-85 UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroid... 315 5e-84 UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales Rep... 313 2e-83 UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacter... 312 5e-83 UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQ... 310 1e-82 UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella deni... 308 9e-82 UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 307 1e-81 UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH 304 1e-80 UniRef50_UPI00019103C5 exonuclease subunit SbcC n=3 Tax=Salmonel... 301 1e-79 UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1... 296 3e-78 UniRef50_A3YE93 ATP-dependent dsDNA exonuclease n=1 Tax=Marinomo... 291 9e-77 UniRef50_Q1ZDG0 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 288 1e-75 UniRef50_A1SUG5 SMC domain protein n=1 Tax=Psychromonas ingraham... 285 5e-75 UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transp... 268 7e-70 UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testo... 264 1e-68 UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB... 264 2e-68 UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales Re... 261 8e-68 UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG... 260 2e-67 UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccu... 260 3e-67 UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulf... 258 9e-67 UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alk... 257 2e-66 UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aest... 254 1e-65 UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Gla... 253 3e-65 UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp.... 252 7e-65 UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkal... 251 1e-64 UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfo... 250 2e-64 UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=... 247 2e-63 UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungat... 244 1e-62 UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum ... 236 3e-60 UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum R... 235 6e-60 UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Ps... 231 1e-58 UniRef50_D1Y744 Exonuclease SbcCD, C subunit (Fragment) n=1 Tax=... 228 1e-57 UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancou... 225 8e-57 UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus V... 218 1e-54 UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis... 213 4e-53 UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 213 5e-53 UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48F... 205 1e-50 UniRef50_UPI0001AF53DF exonuclease SbcC n=1 Tax=Pseudomonas syri... 204 2e-50 UniRef50_Q9HWB8 Nuclease sbcCD subunit C n=6 Tax=Pseudomonas aer... 204 2e-50 UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinoge... 193 2e-47 UniRef50_C9M6Q3 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 193 2e-47 UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50... 193 4e-47 UniRef50_A4VHU3 Exonuclease SbcC n=2 Tax=Pseudomonas RepID=A4VHU... 189 5e-46 UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=... 189 7e-46 UniRef50_C3QPK2 ATP-dependent exonuclease sbcC n=9 Tax=Bacteroid... 184 1e-44 UniRef50_D1Y1F7 Exonuclease (Fragment) n=1 Tax=Pyramidobacter pi... 183 3e-44 UniRef50_Q5P495 Exonuclease SbcC n=3 Tax=Proteobacteria RepID=Q5... 179 5e-43 UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonada... 179 7e-43 UniRef50_Q08QT9 Exonuclease SbcC n=1 Tax=Stigmatella aurantiaca ... 178 1e-42 UniRef50_UPI000197B202 hypothetical protein BACCOPRO_01552 n=1 T... 177 2e-42 UniRef50_D0YZM5 Exonuclease SbcC n=5 Tax=Photobacterium RepID=D0... 176 3e-42 UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP ... 176 6e-42 UniRef50_D0LY14 SMC domain protein n=1 Tax=Haliangium ochraceum ... 175 8e-42 UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis p... 174 1e-41 UniRef50_O68032 Nuclease sbcCD subunit C n=4 Tax=Alphaproteobact... 172 4e-41 UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetob... 171 1e-40 UniRef50_D0SUA4 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 171 1e-40 UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychrofl... 171 1e-40 UniRef50_C9LH68 Exonuclease SbcC n=1 Tax=Prevotella tannerae ATC... 171 2e-40 UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transp... 170 2e-40 UniRef50_Q1NCK9 Exonuclease SbcC n=1 Tax=Sphingomonas sp. SKA58 ... 170 2e-40 UniRef50_Q6IEE1 SbcC exonuclease n=7 Tax=Bacteria RepID=Q6IEE1_B... 170 3e-40 UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteoba... 169 4e-40 UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 T... 169 7e-40 UniRef50_B6QZR1 Exonuclease SbcC n=1 Tax=Pseudovibrio sp. JE062 ... 168 1e-39 UniRef50_C4L7Q2 SMC domain protein n=1 Tax=Tolumonas auensis DSM... 166 6e-39 UniRef50_Q1VUD1 ATPase involved in DNA repair n=2 Tax=Flavobacte... 165 8e-39 UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=C... 164 2e-38 UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. ... 163 3e-38 UniRef50_B1ZI73 SMC domain protein n=6 Tax=Alphaproteobacteria R... 162 5e-38 UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xen... 160 2e-37 UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacte... 160 2e-37 UniRef50_Q1DDQ3 Nuclease SbcCD, C subunit n=1 Tax=Myxococcus xan... 160 2e-37 UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of ... 159 5e-37 UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bactero... 155 8e-36 UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_... 152 7e-35 UniRef50_UPI000191346C exonuclease subunit SbcC n=1 Tax=Salmonel... 152 1e-34 UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 144 1e-32 UniRef50_B3JFY9 Putative uncharacterized protein n=1 Tax=Bactero... 143 3e-32 UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococ... 143 3e-32 UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilon... 137 3e-30 UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi D... 136 4e-30 UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella cop... 135 6e-30 UniRef50_Q2IN23 Exonuclease SbcC n=2 Tax=Anaeromyxobacter RepID=... 135 1e-29 UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 ... 133 4e-29 UniRef50_C3RMV9 Exonuclease sbcC n=3 Tax=Bacteria RepID=C3RMV9_9... 133 4e-29 UniRef50_B8JB08 Exonuclease SbcC n=1 Tax=Anaeromyxobacter dehalo... 131 1e-28 UniRef50_A7VZD0 Putative uncharacterized protein n=1 Tax=Clostri... 130 2e-28 UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina ba... 129 6e-28 UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 126 5e-27 UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=S... 125 9e-27 UniRef50_C1XNQ1 ATPase involved in DNA repair n=1 Tax=Meiothermu... 124 3e-26 UniRef50_D2RLP5 DNA repair ATPase-like protein protein n=2 Tax=A... 123 3e-26 UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus ... 122 6e-26 UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibir... 121 1e-25 UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovo... 121 2e-25 UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohomi... 121 2e-25 UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus ... 120 2e-25 UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobact... 120 2e-25 UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus ... 120 3e-25 UniRef50_D2B0F9 Exonuclease SbcC n=1 Tax=Streptosporangium roseu... 119 5e-25 UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobac... 119 8e-25 UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. ... 118 1e-24 UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepI... 118 1e-24 UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22... 118 1e-24 UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothe... 118 1e-24 UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29... 118 1e-24 UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=... 117 3e-24 UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clos... 117 3e-24 UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bactero... 116 4e-24 UniRef50_B0NZR4 Putative uncharacterized protein n=1 Tax=Clostri... 116 4e-24 UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostri... 116 4e-24 UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae Rep... 116 4e-24 UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=... 115 7e-24 UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis ... 115 7e-24 UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri ... 115 7e-24 UniRef50_A6DE82 Exonuclease SbcC n=1 Tax=Caminibacter mediatlant... 115 9e-24 UniRef50_D1PQD3 SbcC exonuclease family protein (Fragment) n=1 T... 115 1e-23 UniRef50_C1CWL8 Putative Exonuclease sbcCD, subunit C n=1 Tax=De... 115 1e-23 UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=... 114 1e-23 UniRef50_Q9RT44 Nuclease sbcCD subunit C n=2 Tax=Deinococcus Rep... 114 2e-23 UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesentero... 114 2e-23 UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. ... 114 2e-23 UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6L... 113 4e-23 UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea l... 113 5e-23 UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacterac... 113 5e-23 UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuoke... 112 6e-23 UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE 112 7e-23 UniRef50_A1SK70 Putative exonuclease n=1 Tax=Nocardioides sp. JS... 112 7e-23 UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella am... 112 7e-23 UniRef50_UPI0001912546 exonuclease subunit SbcC n=1 Tax=Salmonel... 112 9e-23 UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteoba... 111 2e-22 UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 ... 111 2e-22 UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolytic... 111 2e-22 UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthro... 110 2e-22 UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 110 2e-22 UniRef50_D0MI39 SMC domain protein n=1 Tax=Rhodothermus marinus ... 110 2e-22 UniRef50_C0EE11 Putative uncharacterized protein n=1 Tax=Clostri... 110 4e-22 UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus... 110 4e-22 UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epu... 109 5e-22 UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostri... 109 5e-22 UniRef50_A5Z5M9 Putative uncharacterized protein n=1 Tax=Eubacte... 109 6e-22 UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43F... 109 6e-22 UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostri... 109 6e-22 UniRef50_A8SHZ0 Putative uncharacterized protein n=1 Tax=Faecali... 109 7e-22 UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I... 108 8e-22 UniRef50_O67124 Probable DNA double-strand break repair rad50 AT... 108 8e-22 UniRef50_C7HA26 Exonuclease SbcC n=1 Tax=Faecalibacterium prausn... 108 1e-21 UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostri... 108 1e-21 UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. A... 108 1e-21 UniRef50_C6LAW6 Putative exonuclease SbcC n=1 Tax=Bryantella for... 108 1e-21 UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium... 108 1e-21 UniRef50_B0G4B6 Putative uncharacterized protein n=1 Tax=Dorea f... 108 1e-21 UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydroge... 107 3e-21 UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 107 3e-21 UniRef50_C1XTG5 ATPase involved in DNA repair n=1 Tax=Meiothermu... 107 3e-21 UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0H... 107 3e-21 UniRef50_C1YLC8 Putative uncharacterized protein (Fragment) n=1 ... 107 4e-21 UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME 106 4e-21 UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9R... 106 4e-21 UniRef50_C6PTN2 Exonuclease SbcC n=1 Tax=Clostridium carboxidivo... 106 5e-21 UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteri... 106 6e-21 UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostri... 105 6e-21 UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynne... 105 7e-21 UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga... 105 1e-20 UniRef50_B0MBW5 Putative uncharacterized protein n=1 Tax=Anaeros... 105 1e-20 UniRef50_C0CP32 Putative uncharacterized protein n=2 Tax=Clostri... 104 1e-20 UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sp... 104 2e-20 UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibact... 104 2e-20 UniRef50_A7B251 Putative uncharacterized protein n=2 Tax=Ruminoc... 103 3e-20 UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24... 103 3e-20 UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminoc... 103 3e-20 UniRef50_A4X567 SMC domain protein n=5 Tax=Micromonosporaceae Re... 103 4e-20 UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 103 5e-20 UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria R... 103 5e-20 UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema palli... 102 6e-20 UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacteriu... 102 6e-20 UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinom... 102 6e-20 UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8... 102 8e-20 UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E... 102 8e-20 UniRef50_B2S1H4 Exonuclease SbcC n=25 Tax=Borrelia RepID=B2S1H4_... 102 9e-20 UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum... 102 1e-19 UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipe... 102 1e-19 UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostri... 101 1e-19 UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus ... 101 1e-19 UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytoferm... 101 1e-19 UniRef50_A8SR38 Putative uncharacterized protein n=1 Tax=Coproco... 101 1e-19 UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 700... 101 2e-19 UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium ace... 101 2e-19 UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZ... 100 2e-19 UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ... 100 2e-19 UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease ... 100 3e-19 UniRef50_A5HZ17 Exonuclease n=10 Tax=Clostridium RepID=A5HZ17_CLOBH 100 4e-19 UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=... 100 6e-19 UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomo... 100 6e-19 UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycet... 100 6e-19 UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI0... 99 7e-19 UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 1... 99 7e-19 UniRef50_C7G9Y6 Putative uncharacterized protein n=1 Tax=Rosebur... 99 8e-19 UniRef50_C4DGW1 ATPase involved in DNA repair n=1 Tax=Stackebran... 99 1e-18 UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ ... 99 1e-18 UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybact... 98 1e-18 UniRef50_C9LQV5 Putative RecF/RecN/SMC N domain protein n=1 Tax=... 98 2e-18 UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales... 98 2e-18 UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumar... 98 2e-18 UniRef50_Q67MD3 DNA repair exonuclease n=1 Tax=Symbiobacterium t... 97 2e-18 UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax... 97 3e-18 UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bactero... 97 4e-18 UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC ... 97 5e-18 UniRef50_B8FW38 SMC domain protein n=2 Tax=Desulfitobacterium ha... 96 8e-18 UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostri... 95 1e-17 UniRef50_B6WA22 Putative uncharacterized protein n=1 Tax=Anaeroc... 95 2e-17 UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0W... 95 2e-17 UniRef50_UPI000190B7F1 exonuclease subunit SbcC n=1 Tax=Salmonel... 94 2e-17 UniRef50_UPI000190C700 exonuclease subunit SbcC n=2 Tax=Salmonel... 94 2e-17 UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI 94 2e-17 UniRef50_C2FYC7 Possible ATPase involved in DNA repair n=1 Tax=S... 94 3e-17 UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis ... 94 3e-17 UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lac... 94 3e-17 UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella... 94 3e-17 UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortifer... 94 3e-17 UniRef50_C0Z547 Putative nuclease sbcCD subunit C n=1 Tax=Brevib... 94 4e-17 UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobac... 94 4e-17 UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillu... 93 5e-17 UniRef50_D1ADM4 SMC domain protein n=1 Tax=Thermomonospora curva... 92 8e-17 UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotro... 92 8e-17 UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 T... 92 9e-17 >UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteriaceae RepID=SBCC_ECOLI Length = 1048 Score = 2095 bits (5429), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1048/1048 (100%), Positives = 1048/1048 (100%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA Sbjct: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE Sbjct: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ Sbjct: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA Sbjct: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ Sbjct: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE Sbjct: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV Sbjct: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK Sbjct: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP Sbjct: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE Sbjct: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR Sbjct: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT Sbjct: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR Sbjct: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ Sbjct: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS Sbjct: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM Sbjct: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 KERIPVQIKVKKINGLGYSKLESTFAVK Sbjct: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 >UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepID=A4XY70_PSEMY Length = 1144 Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/1175 (42%), Positives = 652/1175 (55%), Gaps = 161/1175 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDF EPFA +GLFAITGPTGAGKTTLLDAICLALYH TPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +S +S S N+LMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ +G LQ P+VELAR A Sbjct: 61 MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVEGALQAPKVELARIA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+IL DK+++K LTA LTGLD+ RFT+SMLL+QG FAAFL A +RAELLEELTGTE Sbjct: 121 DGEILTDKIREKEHLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +YG IS V+E+ K++ L L+++A G+ LL Q L A Q L EE L+ QQ Sbjct: 181 VYGLISQQVYERTKASEQALNLLKSRAQGMELLDEAQRAELQAEHQRLNQEEASLLARQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q W + +Q+ R + L+QA +A +L L+ ++PA L+P ++ Sbjct: 241 ALQGQRRWCEALQQAEQQCERARLGLEQAQQAHNEAAGELQRLAASEPAARLQPLYQSWQ 300 Query: 301 EHSAALAHIRQQIEEVNTR-------------LQSTMALRASIRHHAAKQSAELQQQQQS 347 + +Q+++++ + L S A + H + ++S L +Q+ + Sbjct: 301 QLQQDRQQAQQELDDMQAQQRHSSEREHQQLWLASRYARQCLSLHQSEERS--LAEQRDA 358 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQ-------QTSDREHLRQWQQQLTHAEQKLNALA 400 L L+ + + GWRAQF Q Q + R + Q ++QL +++ + LA Sbjct: 359 LQARLRATPQRARLGELLGGWRAQFDQRGQLLMRQQTLRAGMAQEREQLATLQRQRDQLA 418 Query: 401 A-ITLTLTADEVATA--LAQHAEQRPL-----------RQHLVALHGQIVPQQKRLAQLQ 446 A T T E A A QH+E + L R + + G+ + + ++LAQ + Sbjct: 419 AQQTDAATRLEQAQAREAGQHSELQALLGADDEAGLRQRWQQLQVQGRALDRLEQLAQSR 478 Query: 447 VAIQNVTQEQTQR-------NAALNE----MRQRYKEKTQQLADVKTICEQEARIKTLEA 495 + E T R +AA N+ +R+RYK QQ+AD + + EQE RI+ LEA Sbjct: 479 EQMAEQIAELTPRLAQLHTQHAAKNDEIIGLRERYKVLKQQVADKEKLLEQEQRIQDLEA 538 Query: 496 QRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL-- 553 RA LQ G+ CPLCGS HPAV YQAL+ + L +++ +L +G TLR +L Sbjct: 539 YRAHLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLESQGGTLRDELTR 598 Query: 554 ---------------------------------------DAITKQLQRDENEAQSLRQDE 574 A +QLQR+ Q L Q + Sbjct: 599 LATQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQREHE--QHLGQLQ 656 Query: 575 QALTQ------QWQAVTASLNITLQPLDDIQPWLD--AQDEHERQLRLLSQRHELQGQIA 626 Q L Q + ++ I + L D+Q L A+DE Q R Q LQG Sbjct: 657 QRLAQVETRQAELTQARSAREIAERALADMQQRLALLARDEENLQARQREQNERLQG--- 713 Query: 627 AHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTA 686 +Q++ Q LL +L G+A LP + ++WLA + + WQQ Q + Sbjct: 714 --------LEQELRHHDQALLASLDGFASELPA--DADTWLAEQASAWRDWQQAQAQHQQ 763 Query: 687 LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQV--HEQCLALHSQQQTLQQQDVL-- 742 +Q ++++ +L E E W+Q EQ AL + Q + L Sbjct: 764 VQEQLRETQRLL-----------AEAEARAEQWQQRWQTEQAQALIEPEPVAQPEQALQG 812 Query: 743 AAQSLQKAQAQFDT----------------------------ALQASVFDDQQAFLAALM 774 A SL AQ + D AL AS F D QAFL AL+ Sbjct: 813 AIDSLASAQRESDALRGRQQSQQSLLQQLQQRLSEAEQRWQQALAASPFTDLQAFLDALL 872 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT-VTVEQIQQELA 833 D++ +L L+ L+ Q L T A Q + T +T+ ++ ++L Sbjct: 873 DDEERERLTSLQARLQ------QALTEATTLLAAADAQWQQLSTTPQTELTLAELDEQLQ 926 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 LRE + QGE+R QL+ D R QQ L +IA + W LN LIGS +G Sbjct: 927 ALQLTLRELSQRQGELRAQLQADDARRSSQQALFAEIAAQESEHALWQQLNGLIGSADGA 986 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 KFRKFAQGLTLD+L+HLAN+QLTRLHGRY L RK+S LE+EV DTWQAD RD RTLSG Sbjct: 987 KFRKFAQGLTLDHLIHLANRQLTRLHGRYQLARKSSGELELEVCDTWQADVARDCRTLSG 1046 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 GESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD ETL+ ALDALD LNASGKTIGV Sbjct: 1047 GESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDGETLEVALDALDNLNASGKTIGV 1106 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 ISHVEAMKERIPVQ++V K GLGYS+L++ FAVK Sbjct: 1107 ISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAVK 1141 >UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3W6_9NEIS Length = 1140 Score = 634 bits (1634), Expect = e-180, Method: Compositional matrix adjust. Identities = 482/1164 (41%), Positives = 644/1164 (55%), Gaps = 149/1164 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEWKIDFT+ PF +NGLFAITGPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTQPPFKNNGLFAITGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++M+R TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELA A Sbjct: 61 LKTISASSNEIMSRHTADCLAEVEFEVKGQVYRAFWSQRRARDKADGALQAPKVELADGA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G IL ++ DKL+ +TGLD+ RFT+SM+L+QG FAAFLNA ERAELLEELTGT+ Sbjct: 121 -GNILTSQINDKLKRIEAITGLDFARFTKSMMLAQGGFAAFLNASANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFEQ + A+ L++L+A+A GV LL E+ Q++ + LT + L Q+ Sbjct: 180 IYGQISQRVFEQARDAKQALDQLRAKADGVELLPEERRQAMQEQIGELTQQLTALHAEQE 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP---HWE 297 Q + W + + + Q A Q A +A+P+L L + PA +RP W+ Sbjct: 240 QTRALRQWRYEVGQAELAEEQAQSAAQAAQDALRQAEPELQRLQRSDPAEAVRPVYLAWQ 299 Query: 298 ----RIAEHSAALAHIRQQI-----EEVNTRLQST-----MALRASIRHHAAKQSAELQQ 343 R + +AL +++Q+ + V+ Q+T +A R R A +Q Sbjct: 300 DEMARQGQTRSALERVQEQLAASRQQSVSAHWQATTIAEGLAAREQQRGQA------VQD 353 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + Q+ WL H F + +GW++++ Q ++ + QQ T + + LA I Sbjct: 354 ELQASQAWLARHAHFAGLGEKLSGWQSEYGQIQQAQQAV---QQLQTQQQAQQGELADIE 410 Query: 404 LTLT--ADEVATALAQH-----AEQRPLRQHLVALHGQIVP--------------QQKRL 442 L + A A+H A Q RQ L GQ + ++L Sbjct: 411 TRLARQVQALQQATARHEQSRQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQL 470 Query: 443 AQ-----LQVAIQNVTQEQT---------QRNAALNEMRQRYKEKTQQLADVKTICEQEA 488 AQ Q+A Q V QE + ++ L+ +R+ Y++ +Q+ D + + QE Sbjct: 471 AQQATQLRQLAAQRVQQETSLADTHQQLAEQQTGLDALRRDYRQLKEQVDDKRKLLLQEQ 530 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 RI++LEA RA LQ G+ CPLCGS HP +++YQ L+ + L E +++L E G Sbjct: 531 RIQSLEAHRAALQPGEACPLCGSHEHPGIQSYQQLDSSATERALQDKEAALQRLEETGNA 590 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT---LQPLDDIQPWLDAQ 605 +GQL ++T + ++ + +L Q Q +W A A L ++ Q +Q L Sbjct: 591 AKGQLASLTGRQEQQQQSLAALAQSLQLAQAEWNARAAPLGLSDNEWQHESSLQQGLTTA 650 Query: 606 DEHERQLRLLSQR----------------------------HELQGQIAAHN-QQIIQYQ 636 ++ E L+ Q+ HEL Q AH +++ + Q Sbjct: 651 EQQEAALKTTLQQAETAQQRLAEAQQQEAQSAAQRQEAAQQHELLQQSQAHAAKRLAELQ 710 Query: 637 QQ-------IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW------------ 677 QQ +Q + LL + T+ ++ WLA RQQ+ Q+W Sbjct: 711 QQRDVASRAAQQASERLLAAIAAAGFTVA--NDMAHWLAERQQDWQTWQAKQREQQQQEA 768 Query: 678 ----QQRQNELTA-----LQNRIQQL---TPILETLPQSDE--LPHCEETVVLENWRQVH 723 QQ ++E A Q R ++L P +DE L C E V + Sbjct: 769 ELLKQQARSEQAAKLAQVWQARWRKLGVEAPCHRADGVTDEAALARCAERV-----EALS 823 Query: 724 EQCLALHSQQQTLQQQDVLAAQSLQKAQAQ--FDTALQASVFDDQQAFLAALM--DEQTL 779 Q +L Q L+ L AQ Q A+ + AL AS F D AF AL+ +E+ Sbjct: 824 AQIASLQGQHAQLEAD--LHAQQRQGVDAETAWLAALAASPFADGDAFRQALLPGEERQR 881 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 Q + + + RQA L T TA LA QQ R T T Sbjct: 882 LQTLRQQLQQAVEHRQA-VLHTATATLLALQQQAR-------TPLALAELDAALATLDAQ 933 Query: 840 RENTTSQ-GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 R+ +SQ G ++ L DA RQ QQ L QQI Q V+ W LNSLIGSKEGDKFRKF Sbjct: 934 RQALSSQQGALQALLNDDALRRQGQQALFQQIEQQAADVDIWQRLNSLIGSKEGDKFRKF 993 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 AQGLTLD+L+HLAN+ L RLHGRYLLQRK + LE+E+VDTWQAD RDTRTLSGGESFL Sbjct: 994 AQGLTLDHLMHLANRHLERLHGRYLLQRKPTGELELEIVDTWQADVTRDTRTLSGGESFL 1053 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVE 1018 VSLALALALSDLVSHKT IDSLFLDEGFGTLD ETL+ ALDALDA+N+SGK+IGVISHV Sbjct: 1054 VSLALALALSDLVSHKTSIDSLFLDEGFGTLDGETLEVALDALDAINSSGKSIGVISHVA 1113 Query: 1019 AMKERIPVQIKVKKINGLGYSKLE 1042 M+ERI VQI ++K +GLG S++E Sbjct: 1114 GMQERIAVQIVIRKASGLGASRIE 1137 >UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID=C8Q3M6_9ENTR Length = 1179 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 335/796 (42%), Positives = 432/796 (54%), Gaps = 111/796 (13%) Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA------ 400 +LN QE +R +Q +E WR++ + S EHL +WQ +T +++ +A Sbjct: 393 ALNQQQQESERLQQLWDEQQQWRSREASVASWGEHLTRWQSDITRLDEREQTVAQLRHQQ 452 Query: 401 ------------AITL------------TLTADEVATALAQHAEQRPLRQHLVALHGQIV 436 A+T T +V ALAQH QR RQ L L Q Sbjct: 453 QQQQQQLDQLQHALTARQQAAQPLAEQETRDISQVREALAQHQAQRASRQQLTLLAAQWH 512 Query: 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQ 496 Q + Q Q + +TQ+ L +R+ +K + Q + DV+TIC+QE I L + Sbjct: 513 ALQPQQQQRQQKLHALTQQYQAEEQVLQALREEWKRENQAMLDVQTICDQERTIAQLADE 572 Query: 497 RAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 RA+LQ PCPLCGS HPA+E Y+ LEPG NQ RL AL+ V +L E G Q Sbjct: 573 RARLQPNHPCPLCGSCQHPAIEQYRQLEPGENQQRLAALQTRVAQLKESGTAKGEQQRLS 632 Query: 557 TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL--QPLDDIQPWLDAQDEHERQLRL 614 Q Q + E + + Q LT+QWQ +T L +T + DD+ W QD+ E QL+ Sbjct: 633 LLQQQALQQELKDIGQQLTTLTEQWQQLTGELALTFAVEQQDDVIRWQQQQDQQENQLQA 692 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA-----------------LTL 657 + + Q + Q + QR + T YA LTL Sbjct: 693 WLEHLQQQQLAQQQISSVQQALDDLRQRSE------TEYAAWQQLSQQLAQQLAQHQLTL 746 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRI------------------QQLTPILE 699 P + ESWL T Q Q WQ+ + LT LQ ++ Q+L + + Sbjct: 747 PAREARESWLNTLQLRWQKWQESERLLTNLQPQLAKADSERHNQQQNLAREQQRLDALQQ 806 Query: 700 TLP----QSDELPHCEETVV----LENWRQVHEQCL----------------------AL 729 TL Q+ E + + ++ RQ H+ L +L Sbjct: 807 TLSALQLQNAEQHQRRQQLFGDRQVQAERQAHQAALQAGEQELAQQLQAWQQAQSAVHSL 866 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 Q+ L+QQ + A L+ A+ +ALQ S F D+ A AAL+D + QL Q Q L Sbjct: 867 SGQRAQLEQQQLTQAARLEAAETDLRSALQHSDFADEAALRAALLDVAEVDQLRQRLQAL 926 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRP---DDGLALTVTVEQIQQELAQTHQKLRENTTSQ 846 E QR+Q L Q + L+ HQQ RP D LA + L LR+N Q Sbjct: 927 EQQRQQQTALSQQLVQRLSAHQQQRPAALSDELAADIGTR-----LENLRMALRDNARQQ 981 Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 GE +QQL DA R+QQQ+L+ QI+ ++ W LN LIGS +GDKFR+FAQGLTLD+ Sbjct: 982 GEAQQQLSSDARLREQQQSLLTQISSHEAELTQWSQLNELIGSAKGDKFRRFAQGLTLDH 1041 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 LV LAN+QL RLHGRYLLQR+A++ LE++VVDTWQADA RDTRTLSGGESFLVSLALALA Sbjct: 1042 LVWLANRQLDRLHGRYLLQRRATDELELDVVDTWQADATRDTRTLSGGESFLVSLALALA 1101 Query: 967 LSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 LSDLVSHKTR++SLFLDEGFGTLD+ETLDTALDALDALNASGKTIGVISHVEAMKERIPV Sbjct: 1102 LSDLVSHKTRLESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1161 Query: 1027 QIKVKKINGLGYSKLE 1042 QIKV+K+NGLGYSKLE Sbjct: 1162 QIKVRKMNGLGYSKLE 1177 >UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBT2_DICDC Length = 1227 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 291/672 (43%), Positives = 387/672 (57%), Gaps = 89/672 (13%) Query: 465 EMRQR--YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 ++RQR Y+ + + L D++ E E I +LE++R QLQ G+ CPLCGST HPAVE YQA Sbjct: 557 QVRQRLDYQRQAEHLRDLEKRYELEQHIVSLESERQQLQLGKECPLCGSTHHPAVERYQA 616 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 L P Q RL L EV+ L Q++ + Q Q+ +N S++QD AL QQ Sbjct: 617 LRPSETQIRLQTLRQEVETLRATVVQTDTQINLLQHQRQQQQNALDSVQQDLSALEQQCV 676 Query: 583 AVTASLNITLQP--LDDIQPWLDAQDE-----------HERQLRLLSQRHEL-------- 621 A++ L I P L+ + WL + +E ERQ R + + +L Sbjct: 677 ALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQAHIADRERQSRQIQESKDLLTSASQLL 736 Query: 622 --QGQIAAHNQQ---------------IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE 664 Q A NQQ + + Q++++ Q + TL G+ L+ P+ +++ Sbjct: 737 QQTEQQLALNQQQRDALTLAQSELQQTLEKITQELQRLHQAISQTLEGFGLSAPELTQQD 796 Query: 665 SWLATRQQEAQSWQ-----------------------QRQNELT--ALQNRIQQLTPILE 699 WL RQ E WQ QRQ E T A++++ QQL + Sbjct: 797 DWLRQRQLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREETNLAIKSQHQQLAELQR 856 Query: 700 TLPQSD-----------------ELPHCEETVVLEN------WRQVHEQCLALHSQQQTL 736 +L Q+ EL + + EN W+ L+ + +L Sbjct: 857 SLEQAQQQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQNSQSHISHLNGELGSL 916 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 +QQ A +L A QF AL+ + F D+ F AL+DE T QL LK+ L +++Q Sbjct: 917 EQQHQRADDALNAATEQFGAALRETEFQDEADFRQALLDESTRHQLMMLKERLNQRQQQV 976 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 +++ Q TL H Q++P + ++ I Q LA L+ QGE+RQQL D Sbjct: 977 ESVHQQAENTLDHHLQNKPA-SMPEGISHHDIHQLLAGLGDMLKNEVRHQGELRQQLAGD 1035 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 R +QQ L+ ++ + Q+ EDWG LN LIGS+ GDKFR+FAQGLTLD+LV+LAN+QL+ Sbjct: 1036 QQLRDKQQALLNEVERSRQRSEDWGCLNQLIGSQRGDKFRRFAQGLTLDHLVYLANRQLS 1095 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 RLHGRYLLQRKA++ LE++V DTWQADAVRDTRTLSGGESFLVSLALALALSDLVS+KTR Sbjct: 1096 RLHGRYLLQRKAADTLELQVADTWQADAVRDTRTLSGGESFLVSLALALALSDLVSNKTR 1155 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 IDSLFLDEGFGTLD ETLDTALD LD LNASGKTIGVISHVEAMKERI VQI+V+K NGL Sbjct: 1156 IDSLFLDEGFGTLDEETLDTALDVLDNLNASGKTIGVISHVEAMKERIQVQIRVRKRNGL 1215 Query: 1037 GYSKLESTFAVK 1048 G S+L+S +AVK Sbjct: 1216 GISQLDSEYAVK 1227 >UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=A9BQD0_DELAS Length = 1165 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 264/598 (44%), Positives = 341/598 (57%), Gaps = 61/598 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT+ PFA NGLFAITG TGAGK+TLLDAICLALYH+TPR Sbjct: 1 MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+N+S S NDLMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELAR Sbjct: 61 LNNISASANDLMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDRLDGALQAPKVELAR-G 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL+ + +DKLE TA +TGLD+ RFT+SMLL+QG FAAFL A ERA LLEELTGTE Sbjct: 120 DGSILSSQTRDKLEQTAAITGLDFERFTKSMLLAQGGFAAFLQANANERAGLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VFE+ + AR L++L+AQA GV LLTPE +L A L E+ L Sbjct: 180 IYGLISQKVFERARDARQRLDQLKAQADGVELLTPEARDALQAQADSLVTEQATLQADYL 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP---HWE 297 + Q W + + Q + A E+A P+L L+ +PA+ L+P W+ Sbjct: 240 RAQAQHQWQQQLAQATQTLQAARTGCADAAQALEQATPELERLAHDEPAQALQPLHQAWQ 299 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH-HAAKQSAEL-----------QQQQ 345 R +AA RQQ++++ Q T A R ++H HA SA L Q + Sbjct: 300 R---STAACDDSRQQLQQLREHEQQTQA-RLLLQHRHAQALSARLAQAAQDTLARQQAEH 355 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS---------------DREHLRQWQ---- 386 Q+L + +H WR QF + S D E R Q Sbjct: 356 QTLEQFCTQHAAHALLGERLGSWRQQFKLRASQQQQAANQQQALRKLDAEQARMAQSAEA 415 Query: 387 -----QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQ---------HLVALH 432 Q T A+ +++A L DE A L LR HL Sbjct: 416 GTAQVQAATDAQARVSA----ALQHAQDEQAQRLQGSGGMAELRAREQAEQDRLHLWRQA 471 Query: 433 GQIVPQQKRLAQLQVAI-QNVTQEQTQRNA---ALNEMRQRYKEKTQQLADVKTICEQEA 488 Q++ LA+ Q A+ Q + + Q A +L +RQ+YK +Q+AD +T+ QE Sbjct: 472 ETQAAQRRELARQQAALEQELRDGEAQARAQDTSLQALRQQYKSVKEQVADKQTLLLQEQ 531 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEG 546 RI++L R LQ GQPCPLCG+ HPAV AY+AL+ ++ L ++E+ L +G Sbjct: 532 RIQSLSEHRHALQPGQPCPLCGAHEHPAVAAYEALDASATEAALRRKQDELDALQTQG 589 >UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK95_PHOAA Length = 1229 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 305/797 (38%), Positives = 438/797 (54%), Gaps = 102/797 (12%) Query: 341 LQQQQQSLNTWLQEHDRFR----QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 LQ+QQQ +N W Q+ D+ Q+N+ + QQ + + L+ +Q AEQ+L Sbjct: 438 LQEQQQHINQWTQKADKLTTELTQFNDSLNKQQKDLKQQIENSQPLKLAFEQ---AEQQL 494 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 L + +++ ++ ++ L+ L L QI+ Q +A + +Q + Sbjct: 495 FNLQK---QYSQEKLKKQFIEYQQKLTLQHKLEVLSPQILQLQATIANNNLRLQQPEKLL 551 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + + + ++ EK Q L D+ + E +I +LE +RAQL+ G PCPLCGS HPA Sbjct: 552 KELPIQIEAVNKQLSEKQQHLEDLSQRIQLEQKIVSLEKERAQLKEGDPCPLCGSEHHPA 611 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 ++AYQ +E ++ RL L + ++L +L + + +Q E + Sbjct: 612 IQAYQHIELPKSEQRLKDLRQQSEQLQTTKISLVNKKEFQQQQYNHILQEIADAEPQLNS 671 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDA---QDE-------------------------- 607 L QQWQ + L I + PLD +P L+A Q++ Sbjct: 672 LAQQWQQICEILQIEISPLD--KPALEAFVQQNQSAYQLSQTQLTEFELAEKEYQKTEKT 729 Query: 608 ---HERQLRLLSQRHEL-QGQIAAHNQQIIQYQQQIEQRQ-------QLLLTTLTGYALT 656 H+ ++ + +R EL + Q A + + + Q +I+Q+Q + + + L Y L Sbjct: 730 LTVHKEHIKEIERRVELDKQQYDARKKYLSELQPEIQQQQCKLTDVIEKIRSELQEYDLL 789 Query: 657 LPQEDEEESWLATRQQE-------AQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 LP ++ E+WL R+ E ++WQQ Q E +QN+ + L E + H Sbjct: 790 LPMLNDAENWLQQRKHEWKIYQNCRENWQQLQKEQAVVQNQTESLNKQKEEYASRLNILH 849 Query: 710 CEETV-------------VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ--- 753 +E L + V + AL Q L+++ A LQ+AQ+ Sbjct: 850 QKEQQQKQQLEKAQQQRQALFGEQSVAKITQALQQHSQKLEEEYQQALSHLQQAQSHINQ 909 Query: 754 -------------------------FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQN 788 F++ L+ S+F +Q F AAL+ + +L QLK+ Sbjct: 910 LTGAIYETEKNRSQAEYQRQLAEQNFNSVLEKSIFANQSIFEAALLPPEQRKELRQLKEQ 969 Query: 789 LENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGE 848 LE Q+ QA+TL + AETL QH ++RP L T Q+ ++L + ++L++NT QGE Sbjct: 970 LEQQQVQAKTLCQKAAETLQQHMKNRP--KLLDQYTKPQLIEQLKNSTEELKKNTLQQGE 1027 Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 +R L DA RQQQ++L+++I Q +DW YLN+LIGS +G KFR+FAQGLTLD+LV Sbjct: 1028 LRNLLSNDATRRQQQKSLLEEIDHCRQNYDDWSYLNNLIGSADGAKFRRFAQGLTLDHLV 1087 Query: 909 HLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 HLANQ+L +LHGRY LQRK + LE++V+DTWQADA+RDT+TLSGGESFLVSLALALALS Sbjct: 1088 HLANQRLEKLHGRYYLQRKNCDGLELQVIDTWQADAIRDTKTLSGGESFLVSLALALALS 1147 Query: 969 DLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 DLVS+KT I+SLFLDEGFGTLD ETLD ALDALD+LNASGKTIGVISHVEAMKERIPVQI Sbjct: 1148 DLVSNKTCINSLFLDEGFGTLDPETLDIALDALDSLNASGKTIGVISHVEAMKERIPVQI 1207 Query: 1029 KVKKINGLGYSKLESTF 1045 KVKKINGLG SKL F Sbjct: 1208 KVKKINGLGISKLAPEF 1224 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/294 (67%), Positives = 228/294 (77%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQPDGNLQ P+VELA Sbjct: 61 LMTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPDGNLQTPKVELAYKE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GKILADK++DK E +TGLDYGRFT+SMLLSQG FAAFLNAK ERA+LLEELTGTE Sbjct: 121 NGKILADKIQDKEEKVTEITGLDYGRFTKSMLLSQGDFAAFLNAKANERADLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S ++ QHK A++ELE LQ +AS + LLT EQ Q Q L + E QL + Sbjct: 181 IYGVLSQQIYLQHKEAQSELEILQVKASAIDLLTKEQHQQYLEQQQQLANCELQLNQQIK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 +Q S WLTR++ELQ+ + +LQQA A+PQL L+ ++PA LRP Sbjct: 241 TQQYSEQWLTREEELQKFLTENNASLQQAEKALTHAEPQLQKLANSEPAEALRP 294 >UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enterobacteriaceae RepID=B2VIR7_ERWT9 Length = 1119 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/237 (76%), Positives = 204/237 (86%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR KNLNSLKGEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L N++QSQNDLMTRDTAECLAEVEFEVKG A+RAFWSQNRAR DGNLQ PRVELARC Sbjct: 61 LKNITQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQNRARGAVDGNLQAPRVELARCE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D I+ADKVKDKLE A+LTGLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 121 DNHIVADKVKDKLENIASLTGLDFERFTKSMMLSQGQFAAFLNADANKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 IYG++S+ VFE+HK A+T L+ L+AQA + LL EQ QSLT+ L L D+E+ L + Sbjct: 181 IYGRLSSAVFERHKEAKTALDALRAQAGAMDLLDAEQQQSLTSQLAQLLDDERVLTS 237 >UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N0H5_PHOLL Length = 1228 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 293/733 (39%), Positives = 411/733 (56%), Gaps = 104/733 (14%) Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 + +++ L Q+ EQ PL+ L L QI+ Q +A + +Q + + + + Sbjct: 501 SPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHHIRLQQPEKLLKEFPVQIESI 560 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 ++ +K Q L+D+ + E +I +LE +RAQL+ G PCPLCG+ HPA++AYQ +E Sbjct: 561 DKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQLKEGSPCPLCGAEHHPAIQAYQNIELP 620 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA--QSLRQDE---QALTQQW 581 ++ RL L + + L +L + K+ Q+ E + Q + E LTQQW Sbjct: 621 KSEQRLKDLRQQFEALQATKISLVNK-----KEFQQQEYDHILQEITDAEPRLNILTQQW 675 Query: 582 QAVTASLNITLQPLDDIQPWLD-----------------------------------AQD 606 Q A L + D +P L+ A Sbjct: 676 QETCAILQTEISLSD--KPALELFVQQNQSAHRLCQTQLTEFELAEKTYQKTEKTVTAHQ 733 Query: 607 EH----ERQLRLLSQRHE-LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED 661 E+ ER + L +H L+ Q++ +I Q Q ++ + + + L Y L+LP + Sbjct: 734 EYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKMTSELQQYNLSLPMLN 793 Query: 662 EEESWLATRQQEAQ-------SWQQRQNELTALQNRIQQL-------------------- 694 + E+WL R++E Q +WQQ Q E +QN+I+ L Sbjct: 794 DTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKEEYLSHLNRLNQTAQQ 853 Query: 695 --TPILETLPQSDELPHCEETVV---------LENWRQVHEQCLALHSQQQT-------- 735 + ET Q +L E++V + ++H+Q L+ Q Q+ Sbjct: 854 QKQQLAETQQQRQQL-FGEQSVTEITQALQQQSQKLEEMHKQALSHLQQAQSSINQLTGA 912 Query: 736 ---LQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQ 792 ++ D + Q Q+A+ F+ AL S F DQ A +AL+ ++ +L QLK+ LE Q Sbjct: 913 IHETEKNDNQSEQQKQQAEQNFNAALAKSPFADQHAVESALLSQEQRKELRQLKEQLEQQ 972 Query: 793 RRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQ 852 + QA L + AETL QH+++RP+ L T Q+ ++L +L+ NT QGE++ Sbjct: 973 QIQANALCQKAAETLQQHRKNRPE--LLNQYTKSQLTEQLENMTDELKRNTLQQGELKNL 1030 Query: 853 LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLAN 912 L DA RQQQ++L+++I+ Q +DW YLN+LIGS +G KFR+FAQGLTLD+LVHLAN Sbjct: 1031 LGNDAIRRQQQKSLLEEISHCRQNYDDWSYLNNLIGSADGAKFRRFAQGLTLDHLVHLAN 1090 Query: 913 QQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 Q+L +LHGRY LQRK S+ LE++VVDTWQADA+RDT+TLSGGESFLVSLALALALSDLVS Sbjct: 1091 QRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLALALALSDLVS 1150 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +KT IDSLFLDEGFGTLD ETLD ALDALD LNASGKTIGVISH+EAMKERIPVQIKVKK Sbjct: 1151 NKTCIDSLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHIEAMKERIPVQIKVKK 1210 Query: 1033 INGLGYSKLESTF 1045 INGLG SKL F Sbjct: 1211 INGLGISKLSPEF 1223 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/294 (66%), Positives = 229/294 (77%), Gaps = 1/294 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFAS+GLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQP+GNLQ P+VELA + Sbjct: 61 LT-ISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQAPKVELALSS 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKILADK++DK E +TGLDYGRFT+S+LLSQG FAAFLNA+P ERA+LLEELTGTE Sbjct: 120 SGKILADKIQDKKEKIIEITGLDYGRFTKSILLSQGDFAAFLNAQPNERADLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S +++QHK A++ L+ LQA+AS + LLT EQ Q Q LT E QL + Sbjct: 180 IYGILSQQIYQQHKQAQSVLDILQAKASTIDLLTAEQHQQYLEQQQQLTHAESQLNQQIK 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 Q S WLTR++EL+Q + LQQA A+PQL L+ ++PA LRP Sbjct: 240 TVQHSAQWLTREEELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRP 293 >UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6W2_PROST Length = 1225 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 199/357 (55%), Positives = 246/357 (68%), Gaps = 7/357 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT+EPFAS GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S QN+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+P+G LQ P+ ELA + Sbjct: 61 LSTLSVKQNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRASNKPEGKLQPPKAELATVS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKI+A+KV D E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGKIIAEKVSDIREQIVQITGLDFGRFTKSILLSQGDFAAFLNASEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS+ ++ QHK + +LE L+A+A + LLT + Q+L VL D+E+QL + Sbjct: 181 IYSQISSYIYRQHKQVKNDLEILKARAQSIHLLTESEHQALIEQQTVLADQERQLNQKRT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q QQ+L W RQ +L + + QQA + A+PQ LS PA NLRP W+ + Sbjct: 241 QNQQALYWQQRQQQLTARLHQLELDQQQAEKAYQDAEPQFKKLSDNLPAENLRPLWQDVE 300 Query: 301 EHSAALAH-------IRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 AL + QQ E +L A A ++H ++ +QQQ ++T Sbjct: 301 RQQQALNELLEKQQSLSQQCENNTQQLTPLQAQLAQVQHEHSQHQNYVQQQTVLIDT 357 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 172/302 (56%), Positives = 217/302 (71%), Gaps = 2/302 (0%) Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 L AQ +F+ AL S F QQAFLAAL+ QLEQL+Q L R QAQT + Sbjct: 926 LTTAQQRFEHALSTSPFATQQAFLAALLAPDEKLQLEQLQQRLLQSRLQAQTRYKEGERA 985 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 +H +PDD + ++E+ QQ + Q ++++ QG+I QL+ D R QQ+ L Sbjct: 986 RQEHLAQKPDDHIE--ASLEEWQQAIIQLDEEIKNLNKQQGQIFSQLEADKQQRHQQRGL 1043 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR 926 +Q+I Q EDWGYL LIGS EGDKFR++AQGLT D L+ LAN +L +LHGRYLL+R Sbjct: 1044 LQEIEQSQSHYEDWGYLCELIGSAEGDKFRRYAQGLTFDCLISLANLRLDKLHGRYLLKR 1103 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGF 986 + LE++V+D WQAD +RD +TLSGGESFLVSLALALALSD+VS+KT+++SLFLDEGF Sbjct: 1104 NHNADLELQVIDGWQADTIRDIKTLSGGESFLVSLALALALSDMVSNKTQLESLFLDEGF 1163 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 GTLD ETLD ALDAL++LNASGKTIGVISHVEAMKERI VQI VKK NG G+S+L S + Sbjct: 1164 GTLDPETLDIALDALESLNASGKTIGVISHVEAMKERISVQIPVKKTNGFGFSELPSRYR 1223 Query: 1047 VK 1048 ++ Sbjct: 1224 IR 1225 >UniRef50_A7FLH1 Nuclease SbcCD, C subunit n=39 Tax=Enterobacteriaceae RepID=A7FLH1_YERP3 Length = 1229 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/294 (64%), Positives = 227/294 (77%), Gaps = 1/294 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+ SQN+LMTR TAE LAEVEF+VKG YRAFWSQ RARN PDGNLQ P+VELA C Sbjct: 61 LI-VTPSQNELMTRHTAESLAEVEFDVKGIRYRAFWSQRRARNSPDGNLQAPKVELALCE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GKILADKV+DKL++ A +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGT+ Sbjct: 120 NGKILADKVRDKLDMIAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S VFE+HK A+ +L+ L +ASG+ LL EQ +L + L+ +E+QL Q Sbjct: 180 IYGRLSERVFEKHKQAKIDLDALHQRASGIELLNEEQRLALAQQIDALSQQEQQLSKEQL 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 Q +NWLT + QQ + QQ E ++A P L L+ ++PA LRP Sbjct: 240 VTQNQINWLTGWQQQQQHVQQYQQQQVLVEQEYQQALPGLQRLARSEPAEKLRP 293 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 195/297 (65%), Positives = 232/297 (78%), Gaps = 1/297 (0%) Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 QA+ AL S F D+ A AAL+ E+ L+QL+Q L +R+QAQ + Q E L QH Sbjct: 931 QAELQQALSTSEFADETALTAALLSEEERQHLQQLQQQLNERRQQAQIRLQQAREILDQH 990 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 Q P G+ + + +QQ+ Q +L+ T QGE+R QL+ D R Q+TL +QI Sbjct: 991 LQLCPQ-GVDKSSELTLLQQQSEQLLAQLKTTTLRQGELRNQLESDTTRRHNQRTLFEQI 1049 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 + QQ +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL+RLHGRYLLQRK ++ Sbjct: 1050 ERSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQRKTTD 1109 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 ALE++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD Sbjct: 1110 ALELQVVDTWQADAIRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLD 1169 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 +ETLDTALDALD+LNASGKTIGVISHVEAMK+RIPVQIKVKK+NGLG S+L++ F V Sbjct: 1170 AETLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVKKVNGLGVSRLDNAFRV 1226 >UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJK3_9GAMM Length = 1231 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 260/662 (39%), Positives = 355/662 (53%), Gaps = 123/662 (18%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+N+L+ EWKIDFT FA NGLFAITGPTGAGKT++LDAICLALYH TPR Sbjct: 1 MRILSLRFKNINALRDEWKIDFTSGEFAENGLFAITGPTGAGKTSILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +SQS N+LMTR TA+ LAEVEFEVKG++YRAFWSQ R+R++ +GNLQ +VELAR Sbjct: 61 LRTISQSTNELMTRGTADALAEVEFEVKGQSYRAFWSQRRSRDKAEGNLQEAKVELARLG 120 Query: 121 D--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D +ILA +VK K +L ++GLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTG Sbjct: 121 DQGDEILASQVKVKNQLIEQISGLDFERFTKSMMLSQGQFAAFLNADANDRAELLEELTG 180 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 TEIYG IS V+E+ KSA E++ L+A+A GV LL+ EQ+ L+ V++ + K Sbjct: 181 TEIYGLISERVYERFKSASDEVKHLEARAEGVELLSVEQLAELSEQQTVISTQLKSTEQQ 240 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW-- 296 +Q Q W + +Q + Q QQ E E L L+ ++PA LR + Sbjct: 241 HKQLQAEQRWWNDYSKAEQTLTEAQLGQQQVAKEREAHAEDLDRLAASEPAEKLRAPYQI 300 Query: 297 ------------ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 ++IAE + + + QQ + +L+S S+ AKQ A Q Q Sbjct: 301 LKAVQQRVTSLVQQIAEQTPQITMLNQQKADAEVQLKSK-----SVALDEAKQKA--QDQ 353 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQF----SQQTSDREHLRQWQQQLTHAEQK----L 396 ++ +N D+ ++E A ++QF S+Q + R + + QQL +Q+ L Sbjct: 354 ERLIN------DQVVPLDSEIARLQSQFADASSEQQNTRSQVDKLNQQLADLKQRGEADL 407 Query: 397 NALAAITLTLTA----------------------------DEVATALAQHAEQRPLRQ-H 427 L AIT L+A ++A +L Q AEQ+ Q Sbjct: 408 EQLKAITEHLSAQTHLNDLTERLPLWRAQLDQELQLQAELKQIAVSLQQRAEQQSKDQAE 467 Query: 428 LVALHGQIVPQQKRLA-----------QLQVAIQN------------------------- 451 AL QI QQ L QLQV++ Sbjct: 468 HAALELQISEQQSLLEPLETELRDCLQQLQVSLAGRNLEVLEADFSRLQAQQPLLTEMRH 527 Query: 452 -------VTQEQTQRNAALNE--------------MRQRYKEKTQQLADVKTICEQEARI 490 ++QEQT A L +R+++ K Q + D+K + EQE +I Sbjct: 528 SAEQFAQLSQEQTMATAQLQTLQNQLNLTDSQLAGLREQWPLKNQAVKDLKKLLEQERKI 587 Query: 491 KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLR 550 +LEA+RA+LQAG+ CPLCGS HP V YQ L+ + RL E + +L ++G TL Sbjct: 588 NSLEAERAKLQAGEACPLCGSHEHPLVAEYQTLDVSDTEQRLQVEEAALDELKQQGTTLN 647 Query: 551 GQ 552 Q Sbjct: 648 SQ 649 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 178/299 (59%), Positives = 218/299 (72%), Gaps = 7/299 (2%) Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 A++ L +S F D+ F+AAL+DE T+L+ L L+ + Q L+ Q AQH Sbjct: 936 AEWQQILGSSQFADEAEFVAALLDETERTELKALADRLKQAQEHNQALLKQAQ---AQHA 992 Query: 812 QHRPDDGLALTVTVEQ---IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + G A +E +Q++LA L++ +GE+ QL+QD R QQ L Sbjct: 993 DLQAQ-GEAAKYALEHATPLQEQLASIETALKDLIHQRGEVSSQLEQDKQRRNSQQQLFA 1051 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKA 928 QI ++ +D YLNSL+GS+ GDKFR+FAQGLTLD+LV+LAN QL RLHGRY LQRK Sbjct: 1052 QIEAAKRRYDDLAYLNSLVGSQRGDKFRRFAQGLTLDHLVYLANNQLDRLHGRYQLQRKQ 1111 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGT 988 SEALE++VVDTWQAD VRDT+TLSGGESFLVSLALALALSDLVS KT IDSLFLDEGFGT Sbjct: 1112 SEALELQVVDTWQADTVRDTKTLSGGESFLVSLALALALSDLVSQKTSIDSLFLDEGFGT 1171 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 LDSETLDTALDALD+LNASGK IGVISH+EAMKERIP+QIKV+K +GLG S+LE+ + V Sbjct: 1172 LDSETLDTALDALDSLNASGKMIGVISHIEAMKERIPLQIKVRKQSGLGISRLENQYQV 1230 >UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=C6DB13_PECCP Length = 1227 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 197/362 (54%), Positives = 249/362 (68%), Gaps = 15/362 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLN+LKGEWKIDFT+EPF+SNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+ NDLMT +T+ECLAEVEFEVKG YRAFWSQ RARN PDGNLQ P+ ELA Sbjct: 61 LGQLSEKHNDLMTHNTSECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELALIE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K+ DK +TGLD+GRFTRSM+LSQGQFAAFLNA+PK+RA+LLEELTGT+ Sbjct: 121 GGRILCEKITDKKNRVEQITGLDFGRFTRSMMLSQGQFAAFLNAQPKDRADLLEELTGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V+++H+ A L LQ +AS + LLT EQ Q + L +E+Q ++ Sbjct: 181 IYGLISERVYDKHRQALEALNMLQTRASSIQLLTDEQRQQVEVQLAERIQQEQQGNVERE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP-HWERI 299 Q +L W + + Q + Q A + ++A+PQL L+ ++PA LRP H E+ Sbjct: 241 QALTTLRWFEQLTQQQTSVTHTQAQHTSAESAIQQARPQLDKLANSEPAEKLRPLHQEKE 300 Query: 300 AEHSAALAHIRQQIEEVNTRLQST-MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 A+L + QQIE++N +L + +ALR L QQ++ + EH + Sbjct: 301 RYRQASLT-LAQQIEQLNGKLAAEQLALRT------------LHQQEEKAEQDVSEHKQI 347 Query: 359 RQ 360 RQ Sbjct: 348 RQ 349 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 190/300 (63%), Positives = 223/300 (74%), Gaps = 1/300 (0%) Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 + A +F ALQ S F D+ AFL AL+DEQ L++ K+ L + +QA TL Q + L Sbjct: 929 ESATERFTLALQQSTFVDETAFLHALLDEQERQTLQEFKETLHQRLQQAATLRQQAEQAL 988 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 +HQQ RP L T E IQQ+LA L+ N QGE ++QL D RQ QQ L+ Sbjct: 989 LEHQQKRPA-SLTEDATQEAIQQQLAALDDTLKTNLRQQGEFQRQLSDDKQQRQNQQNLL 1047 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRK 927 +IAQ Q+ +DW LNSLIGS +GDKFRKFAQGLTLD+LV+LAN QL+RLH RY L+RK Sbjct: 1048 NEIAQSQQKNDDWETLNSLIGSSKGDKFRKFAQGLTLDHLVYLANLQLSRLHDRYQLKRK 1107 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFG 987 LE+ V+DTWQADA RDT+TLSGGESFLVSL+LALALSDLVSHK IDSLFLDEGFG Sbjct: 1108 PGGDLELLVMDTWQADAERDTKTLSGGESFLVSLSLALALSDLVSHKASIDSLFLDEGFG 1167 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 TLD+ETLD ALDALD LNASGKTIGVISHVEAMKERIPVQIKV+K+NGLG S+L +AV Sbjct: 1168 TLDAETLDIALDALDNLNASGKTIGVISHVEAMKERIPVQIKVQKVNGLGVSRLAPQYAV 1227 >UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Providencia RepID=B6XA37_9ENTR Length = 1227 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/413 (51%), Positives = 267/413 (64%), Gaps = 20/413 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT EPFASNGLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+S+N+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+ DGNLQ P+ ELA A Sbjct: 61 LGQISKSKNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRANNKADGNLQDPKAELATVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+I+A+KV + E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGQIIAEKVSEIREKIVQITGLDFGRFTKSILLSQGDFAAFLNATEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS +F QHK A+T+L+ L+AQAS V LLT + Q L Q + +E+QL ++ Sbjct: 181 IYSQISVYIFNQHKQAKTDLDLLRAQASSVNLLTEIEYQELVEKQQQYSAQEQQLSQSKL 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + QQ++ W + +L Q R Q A QQA + A+PQL L+ + PA LRP W + Sbjct: 241 RHQQAVTWHQQYQQLAQNTQRLQLAQQQAQQRYQVAEPQLHKLAQSSPAEALRPDWLAVQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE------ 354 L Q+ + + L+ R + Q A+ Q +Q N W+Q+ Sbjct: 301 SLQTQLDEQTQKQQRITQHLEEAQKQRLPL----VTQHAQAQLEQNQYNEWVQKTTVMID 356 Query: 355 ------HDRFRQWNNEPAGWRAQFSQQTSD----REHLRQWQQQLTHAEQKLN 397 +R Q N + Q SQ S+ + + QQQ+ HA+ LN Sbjct: 357 NEVRPLDNRLSQLNQQKLQLSEQLSQLNSEYLQKKASVENAQQQIDHAKSGLN 409 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 180/298 (60%), Positives = 225/298 (75%), Gaps = 2/298 (0%) Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 AQAQF AL+ S FD Q+ FL AL+ + QLEQLKQ + Q+ +A+T ++ +LA Sbjct: 931 AQAQFIDALKNSPFDTQEQFLNALLPAEEKIQLEQLKQQVTQQQLEAETRYQESLLSLAN 990 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 H+Q R + L++ E IQ L + K++E QG+I QL++D R QQ+ L+ + Sbjct: 991 HEQQRLVEFAELSL--EHIQHVLTELDNKIKELNQQQGQIINQLERDQQQRHQQRELLNK 1048 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKAS 929 I Q +DW YLNSLIGS EGDKFR++AQGLTLD LV LANQQL +LHGRYLLQR Sbjct: 1049 IEQSQLSYDDWSYLNSLIGSAEGDKFRRYAQGLTLDCLVSLANQQLDKLHGRYLLQRSHL 1108 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTL 989 LE++V+D WQAD++RD +TLSGGESFLVSL+LALALSD+VSH+T+++SLFLDEGFGTL Sbjct: 1109 ANLELQVIDGWQADSIRDIKTLSGGESFLVSLSLALALSDMVSHRTQLESLFLDEGFGTL 1168 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 D+ETLD ALDAL++LNASGKTIGVISHVEAMKERIPVQI VKK NGLGYS+L S + V Sbjct: 1169 DAETLDIALDALESLNASGKTIGVISHVEAMKERIPVQITVKKANGLGYSELSSHYRV 1226 >UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNI5_HAHCH Length = 1229 Score = 361 bits (926), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 190/325 (58%), Positives = 234/325 (72%), Gaps = 10/325 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLRLKNLNSLKGEWK+DF +PF SNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRLKNLNSLKGEWKVDFRADPFHSNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + NVS + N++MTR TAECLAEVEFEVKGEAYRAFWSQ RARN +G Q P VELA A Sbjct: 61 I-NVSPTNNEIMTRHTAECLAEVEFEVKGEAYRAFWSQRRARNLAEGRFQPPHVELA-TA 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKL L A LTGLD+ RFT+SMLL+QG FAAFLNA ERAELLEELTGTE Sbjct: 119 DGKILADKVKDKLTLIAELTGLDFARFTKSMLLAQGGFAAFLNAPANERAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK----QLI 236 IYG+ISA VFE+ + A+ ELE+L+A+A G LL+ +++ + L +EK +L Sbjct: 179 IYGKISARVFERQRDAKGELERLRAKAEGQDLLSDDELTAYYEESTALETQEKTEAERLE 238 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + + Q+Q WL R + QQ + L +A A E+ + L L+L++PA LRP + Sbjct: 239 SLRTQKQ----WLDRVTQAQQSFKEAELRLTEATARLEQEKTDLGRLALSEPAEKLRPFY 294 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQ 321 + + A A + I+ + L+ Sbjct: 295 KDYQQAHDAYAQTERHIKSLTESLE 319 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 274/735 (37%), Positives = 387/735 (52%), Gaps = 101/735 (13%) Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 T E+ LA + R R L L +++ LA+L+ +Q E Q +L M Sbjct: 500 TDAELRECLASMQKSRTDRFRLGRLADDYGKRRQELAELKAQLQEREGELAQGKQSLLMM 559 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 R++YK + L D+ + ++E +I +L R++L G+PCPLCGS HP + AY+A + Sbjct: 560 RKQYKAEKAHLDDLDRLMQKERQIASLSEHRSRLSPGEPCPLCGSHEHPGIAAYEAQQES 619 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 + RL ++++L E+G L ++ +L+ L ++ AL +W + Sbjct: 620 DTEKRLQEKRKQLQELEEKGKKLNEAAARLSSELEIGAGARGKLEREMTALQAEWTQLCG 679 Query: 587 SLNITL---QPL---DDIQPWLDAQDEHERQL---------------------------- 612 + L P + + +L ++ E L Sbjct: 680 EFGVNLVIDAPAGAQNAVDVYLQKEEAKENALAERVRSLEQTEKQLQQAKESATAAEQEL 739 Query: 613 -----RLLSQRHELQGQIAAHNQQIIQYQQQ------IEQRQQLLLTTLTGYALTLPQED 661 +L Q+ +LQ N Q+ Q +Q +EQ TL GYA+ P+++ Sbjct: 740 GEILRKLELQQRDLQNLSKEINAQLTQQAEQSAALSALEQGVSEAFATL-GYAM--PRDE 796 Query: 662 EEESWLATRQQEAQSWQQRQNELTA-----------LQNRIQQLTPILETLPQSDE-LPH 709 E+++WL TR EA+ +Q RQ +L L++ ++ T I +TL E L Sbjct: 797 EQDAWLETRNAEAREYQARQEKLEQGVKQAGDLERQLEHAAEKATEIAQTLKGLQENLTQ 856 Query: 710 CEETVV---------------LENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK----- 749 + + E +++ EQ A + TLQ+ A +LQ+ Sbjct: 857 TQAALAEKKAQRQALFGDKSPTEERKRMQEQLAAAEKRWTTLQEDKERADTALQQHLGRE 916 Query: 750 ----------------AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 A+ + AL AS F DQ AF AL++E+ L LKQ L+ Q+ Sbjct: 917 ELLKTQLGSQRALLSDAERLWSEALAASRFADQTAFEQALLNEEERQALAVLKQELDQQK 976 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL 853 +A TL Q AE P L+ EQ+Q L+ + QGEIRQ L Sbjct: 977 DRAATL-KQRAEAELNELLATPATQLSEPELAEQLQT----VADGLKAVSQKQGEIRQLL 1031 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQ 913 + D R +Q L+ I Q+ +DW YL+SLIG+ +G KFR++AQGLTLD+LV+LANQ Sbjct: 1032 QSDQTRRMSRQKLLVDIESQQQRYDDWAYLSSLIGAADGAKFRRYAQGLTLDHLVYLANQ 1091 Query: 914 QLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH 973 L+RLHGRY L+R+ EALE++VVDTWQAD VRDT+TLSGGESFLVSLALALALSDLVSH Sbjct: 1092 HLSRLHGRYELERREGEALELQVVDTWQADTVRDTKTLSGGESFLVSLALALALSDLVSH 1151 Query: 974 KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI 1033 KT IDSLFLDEGFG LDSETL+ ALDALD LNASGK IGVISHVEAMKERI VQIKVKK+ Sbjct: 1152 KTSIDSLFLDEGFGALDSETLEVALDALDCLNASGKMIGVISHVEAMKERISVQIKVKKM 1211 Query: 1034 NGLGYSKLESTFAVK 1048 +GLG S+L++ + ++ Sbjct: 1212 SGLGVSRLDNRYCLE 1226 >UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RVT6_SEROD Length = 1084 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 198/290 (68%), Positives = 228/290 (78%), Gaps = 2/290 (0%) Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 AL AS F D+ AF AAL+D+ QL+Q K+ L ++ +A L+ Q TL Q +Q RP+ Sbjct: 792 ALAASEFSDEAAFSAALLDDAQRRQLQQHKERLHKRQVEASALLAQAVHTLEQQRQQRPE 851 Query: 817 DGLALT-VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 GL T + Q L Q+L+ QGE+R QL+ DA R QQ+L +QI+Q Q Sbjct: 852 -GLDETQADAPALSQSLEALAQQLKTLQLRQGEVRNQLESDAARRLNQQSLFEQISQSQQ 910 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 Q +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLLQRK S+ALE++ Sbjct: 911 QYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQRKTSDALELQ 970 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+ETLD Sbjct: 971 VVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLD 1030 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 TALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE F Sbjct: 1031 TALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF 1080 >UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepID=A8GAK3_SERP5 Length = 1083 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 197/290 (67%), Positives = 229/290 (78%), Gaps = 2/290 (0%) Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 AL AS F D+ AF AAL+D+ QL+Q K+ L+ ++ +A L+ Q ++L Q Q RP+ Sbjct: 792 ALAASEFSDETAFSAALLDDDQRRQLQQRKEQLQQRQVEASALLAQAVDSLKQQLQQRPE 851 Query: 817 DGLALTVTVEQ-IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 GL T Q + Q LA Q+L+ QGE+R QL+ D R QQ+L +QI+Q Sbjct: 852 -GLDEHQTDPQALSQSLAALAQQLKTLQLRQGEVRNQLESDTARRINQQSLFEQISQSQS 910 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 Q +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLLQRK S+ALE++ Sbjct: 911 QYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQRKTSDALELQ 970 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+ETLD Sbjct: 971 VVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLD 1030 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 TALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE F Sbjct: 1031 TALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF 1080 >UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Moritella sp. PE36 RepID=A6FAU1_9GAMM Length = 1223 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 274/720 (38%), Positives = 360/720 (50%), Gaps = 100/720 (13%) Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 A +Q + + + + L L + + + + Q ++ + Q++ N + R+ +K K Sbjct: 508 AFSQQSRLQGIVEQLSGLQQRYLTESQEFEANQASMVALEQQRAGINVEITAKRELFKTK 567 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 +L DV+ + EQE +I +LE R+QL+ GQ C LCGST HP +E YQ + + R Sbjct: 568 KNELNDVQRLLEQEQKIASLEQLRSQLEPGQACQLCGSTEHPLIEEYQHIADSLTVQRKT 627 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 LE +K++ +G L+ +L +L+ + +L+Q + QWQ LN L Sbjct: 628 QLELNLKQIETDGGELKNRLVEANTKLEHFNHRNATLQQQLDSFVAQWQTYNEQLNANLM 687 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQR-------------------------HELQGQIAAH 628 D + QL LSQR +LQ QI Sbjct: 688 ITDSANT-QVFVQQQGVQLAQLSQRIQALKAANMQLQSAQQALTEFDKNSAQLQHQIELV 746 Query: 629 N----------QQIIQYQQQ----IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEA 674 N Q++ Q QQ + + QQ L+ +T LTLP+ ++WL T QQ Sbjct: 747 NRDVKATQDAEQKLTQDAQQQGQVLTELQQTLINNVTELGLTLPEWSLLDNWLVTCQQAL 806 Query: 675 QSWQQRQNELTALQNRI----QQLTPI--------------LETLPQ-SDELP------- 708 Q W Q+ L A ++ QLTP+ LETL SD L Sbjct: 807 QKWDQQSQLLQAANEQLLLAESQLTPLREQLVKLELAIAQTLETLSNLSDNLTAKQQQRQ 866 Query: 709 --HCEETVV---------LENWRQVHEQCLA--------LHSQQQTLQQQDVLAAQSLQK 749 + +V L Q H+ C LH+QQ L Q Q+ Sbjct: 867 QLFGQRSVADARQTMQQQLTTAEQAHQACSTQDHALSNQLHAQQGELTTLQQGLVQQQQE 926 Query: 750 AQ---AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 + A + AL AS F F AL+ + +L LK L + Q L Q E Sbjct: 927 SSDCLATWQHALDASPFATDVEFNQALLPAEEKQRLVVLKSQLTANLTRCQALFEQARER 986 Query: 807 LAQHQQHRPD--DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 L QQ + D + L +++I L Q Q+ QGE++Q+L D Sbjct: 987 LLTLQQTQLTELDIVTLVTQLDEITTRLNQGLQR-------QGELKQRLADDTTRSADLA 1039 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 QQI +D YL SLIGSK+G KFR+FAQGLTLD+LV LANQQL RLH RY L Sbjct: 1040 DFYQQIKACEADYDDKAYLQSLIGSKDGSKFRRFAQGLTLDHLVTLANQQLNRLHSRYQL 1099 Query: 925 QRK---ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLF 981 QRK SEAL ++VVDTW ADAVRDT+TLSGGESFLVSLALAL LSDLVSHKT IDSLF Sbjct: 1100 QRKLASGSEALALQVVDTWLADAVRDTKTLSGGESFLVSLALALGLSDLVSHKTSIDSLF 1159 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LDEGFGTLD+ETLD ALDALD LNASGK IGVISHVEA+KERIPVQ++V K +GLG S Sbjct: 1160 LDEGFGTLDAETLDIALDALDNLNASGKMIGVISHVEALKERIPVQVRVNKGSGLGLSSF 1219 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 221/326 (67%), Gaps = 9/326 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L KN+NSLKGEW+++F +EPF SNGLFAITGPTGAGKTT+LDAICLALYHETPR Sbjct: 1 MKIKRLSFKNINSLKGEWQLNFDQEPFLSNGLFAITGPTGAGKTTILDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+SQN++MTR+TAEC AEVEFEV+G+ YRA WSQ RA+N P GNLQ +VELA Sbjct: 61 LV-ISKSQNEVMTRNTAECAAEVEFEVQGKGYRASWSQRRAKNSPQGNLQEMKVELAEVV 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA +VK K +L A +TGLD+ RF +SMLLSQG+FAAFLNA +RAELLEELTGTE Sbjct: 120 SGNILASQVKLKKQLVAEITGLDFSRFRKSMLLSQGEFAAFLNAPANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ----VQSLTASLQVLTDEEKQLI 236 IYGQIS VFE H A+ EL+KL+A+A GV LLT EQ V T ++TD + Sbjct: 180 IYGQISQAVFESHNLAKAELDKLRAKADGVNLLTDEQRAEIVGEQTGGETLVTDLTQ--- 236 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 Q QQ W + ++ Q + Q +L E QP L L A+PA LR + Sbjct: 237 -QQTSLQQQKQWREQLEKAQVGVTEAQTSLVNTEQETTAQQPALDRLEQAEPAEALRLPF 295 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQS 322 +++ LA + Q+ + + T + S Sbjct: 296 THLSQADTKLAELEQKQQALQTSVVS 321 >UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE Length = 1233 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 180/299 (60%), Positives = 219/299 (73%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSL+GEWKIDF+ PF +GLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA N+PDG LQ R ELAR Sbjct: 61 LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAIRAELARLD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL DK+ DKL+ A LTGLD+GRFT+SM+LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGEFAAFLNADAGKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S VF + K A+++L+ L+ +A+GV LL+ Q ++L ASL +E+ L Sbjct: 181 IYGRLSEAVFARFKQAKSDLDALRERAAGVELLSDAQREALQASLTHAQTQEQALRAQLT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 Q QQ WL RQ E +Q S+ Q QA QPQL L+ A+PA LRP+++ + Sbjct: 241 QAQQQQAWLRRQQEQRQALSQAQTQAAQAEQHWLALQPQLLRLTHAEPALRLRPYYQSL 299 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 181/295 (61%), Positives = 225/295 (76%), Gaps = 1/295 (0%) Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 ++ +AL S F D A LAA++ E+ QL L+ + + QR+Q+ L+ Q + +AQ + Sbjct: 934 RWQSALADSPFSDDAALLAAMLTEEEQRQLTALRDDAQRQRQQSAALLAQAQQAVAQGEA 993 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 RP + L + ++Q + Q+LR+++ QGE++QQL D R QQ + +IAQ Sbjct: 994 TRPQE-LHIDDDDPWLEQRCSALTQQLRQHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQ 1052 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEAL 932 + +DW YLN LIGS GDKFRKFAQGLTLD+LV+LAN+QL RLHGRY L R+ + L Sbjct: 1053 RERAYQDWSYLNQLIGSSSGDKFRKFAQGLTLDHLVYLANRQLMRLHGRYQLLRREGDTL 1112 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSE 992 E+EVVDTWQADA RDTRTLSGGESFLVSL+LALALSDLVSHKTRIDSLFLDEGFGTLD+E Sbjct: 1113 ELEVVDTWQADARRDTRTLSGGESFLVSLSLALALSDLVSHKTRIDSLFLDEGFGTLDAE 1172 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 TLDTALDALD LNASGKTIGVISHVEAMKERIP+QI+VKKINGLG+S+L+S + V Sbjct: 1173 TLDTALDALDTLNASGKTIGVISHVEAMKERIPLQIRVKKINGLGFSRLDSRYRV 1227 >UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms RepID=Q080L9_SHEFN Length = 1232 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 185/357 (51%), Positives = 244/357 (68%), Gaps = 11/357 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT+ PFA NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKNEWKIDFTQSPFAENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSN+S++ N+LMTR TAECLAEVEFEVKG AYRAFWSQ R+R++ DGNLQ +VELA+ + Sbjct: 61 LSNISKTTNELMTRGTAECLAEVEFEVKGVAYRAFWSQRRSRDKADGNLQDAQVELAKLS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILA ++K K EL +TGLD+ RFT+SM+LSQGQFAAFLNA+ ERAELLEELTGTE Sbjct: 121 DGKILASQIKRKTELIEEITGLDFARFTKSMMLSQGQFAAFLNAEANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY ISA V + A+T L+ L+A+ V L +QV + LQ+ + +I QQ Sbjct: 181 IYSLISARVHQHFSDAKTNLKVLEAKLGSVELFDEQQV--VAQQLQIEQLNQALVIDQQQ 238 Query: 241 --QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Q Q + W ++ QQ Q QQAL+ ++ +L L ++PA+ ++P +E+ Sbjct: 239 LAQLSQFITWADNTEQSQQTLVNIQAQQQQALSSVQQHSDELTRLEHSEPAQQIQPLFEQ 298 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 + + + +QIE++ ++ ++R H KQ+ Q +QS++ Q H Sbjct: 299 QQKAQLSTRVLSEQIEQLTEQVS---VAEQTLRQHTHKQT----QAKQSVDKTNQAH 348 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 192/324 (59%), Positives = 234/324 (72%), Gaps = 9/324 (2%) Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQ 787 L +Q Q+ QQ A Q LQ+ QA++ ALQ+S F DQQ+F AL+ + L+QLKQ Sbjct: 911 GLQAQLQSTTQQVTKANQELQQLQAKWQMALQSSPFTDQQSFEQALLTPKERHTLQQLKQ 970 Query: 788 NLENQRRQAQTLVTQT----AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENT 843 L+N +A TLV Q E Q +QH D + ++ Q + HQ+ ++ Sbjct: 971 QLDNDIVKANTLVEQAKIKQTELAQQAEQHGYDIAQHGNIMLQH--QTMEAKHQQDKQTL 1028 Query: 844 TSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLT 903 + +L+QD + R QQ L+ + AQ+ Q +D YL+SLIGS++GDKFRKFAQGLT Sbjct: 1029 ---WRLSHELEQDTNKRAGQQQLLAEQAQIQQDYDDLAYLHSLIGSQKGDKFRKFAQGLT 1085 Query: 904 LDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLAL 963 LD+LV LAN+QL RL GRYLL+RK S+ALE++V+DTWQ DAVRDTRTLSGGESFLVSLAL Sbjct: 1086 LDHLVALANRQLERLQGRYLLERKESDALELQVLDTWQGDAVRDTRTLSGGESFLVSLAL 1145 Query: 964 ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 ALALSDLVSHKT IDSLFLDEGFGTLDS+TLDTALDALD LNASGK IGVISH+EAMKER Sbjct: 1146 ALALSDLVSHKTSIDSLFLDEGFGTLDSQTLDTALDALDNLNASGKMIGVISHIEAMKER 1205 Query: 1024 IPVQIKVKKINGLGYSKLESTFAV 1047 I VQIKV K+NGLG SKL+ FAV Sbjct: 1206 IDVQIKVTKMNGLGISKLQGEFAV 1229 >UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C536_9GAMM Length = 1232 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 177/312 (56%), Positives = 223/312 (71%), Gaps = 20/312 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSLKGEWKIDFT+ PFA+NGLFAITGPTGAGKTTLLDAIC+ALYH TPR Sbjct: 1 MRILSLRFKNINSLKGEWKIDFTQPPFANNGLFAITGPTGAGKTTLLDAICMALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ +S++ N+LMTR TAE LAEVEFEVKG+ YRAFWSQ R+R +GNLQ +VELA+ + Sbjct: 61 LNAISKTSNELMTRGTAESLAEVEFEVKGQGYRAFWSQRRSRGSSEGNLQEAKVELAKIS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG ILA ++K K + ++TGLD+ RFT+SM+LSQGQFAAFLNA P ERAELLEELTGTE Sbjct: 121 DGSILASQIKQKNQQIESITGLDFARFTKSMMLSQGQFAAFLNADPNERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPE-------QVQSLTASLQVLTDEEK 233 IYG IS V + A+ L +L+AQA GV LL+ E Q LT +LQ E+ Sbjct: 181 IYGLISEQVHIEFSQAKQALAELKAQAQGVELLSEEALATYKSQQSELTLTLQNAEAEQT 240 Query: 234 QL---ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 L +T +Q QQ+ + LT +LQ + ++ +QAL + Q QL LS ++PA Sbjct: 241 TLQTQLTWLKQYQQAQSVLT---DLQLQVTKAEQALLE-------HQSQLTRLSNSEPAE 290 Query: 291 NLRPHWERIAEH 302 LRP ++ +H Sbjct: 291 LLRPAYQVYQDH 302 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 178/300 (59%), Positives = 221/300 (73%), Gaps = 7/300 (2%) Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 Q ++ L SVF D +FLAAL+ + QL+QLKQ+L+ ++ +A L+TQ T QH Sbjct: 932 QTYWNEVLSNSVFADLDSFLAALLPQDQKQQLQQLKQDLQTEQTKAVALLTQANNTFEQH 991 Query: 811 QQHRPDDGLALT---VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 D + T + +Q+ ++L QK RE G+I+Q L+ D R Q L Sbjct: 992 ----LLDAQSPTWCDLDWQQLSEQLHHIQQKERELVEQTGQIKQALQDDQKRRLNQTHLF 1047 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRK 927 ++IA + +D YL+ LIGS++GDKFRKFAQGLTLD+LV+LAN+QL RLHGRYLL+RK Sbjct: 1048 EKIALCQIEYDDLAYLHGLIGSQKGDKFRKFAQGLTLDHLVYLANKQLARLHGRYLLERK 1107 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFG 987 SEALE++V+DTWQ D+VRDT+TLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFG Sbjct: 1108 PSEALELQVLDTWQGDSVRDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG 1167 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 TLD ETLD ALDALD L+ASGKTIGVISH++AMKERI VQI+VKK NGLGYS+L +A Sbjct: 1168 TLDRETLDMALDALDNLHASGKTIGVISHIDAMKERIAVQIEVKKQNGLGYSRLAPQYAF 1227 >UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivibrio RepID=Q5E5N3_VIBF1 Length = 1226 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 167/297 (56%), Positives = 210/297 (70%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSL NLNSLKGEWKIDF+ PFA NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++MTR TAEC AEVEFEVKG+AYRAFWSQ R+R + DGNLQ VELA Sbjct: 61 LGGISTSSNEIMTRGTAECSAEVEFEVKGKAYRAFWSQRRSRGKVDGNLQAATVELAEVD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA +VK K EL T+TGLD+ RFT+SM+LSQGQFAAFLNA +RA LLEELTGTE Sbjct: 121 SEKVLATQVKKKDELINTITGLDFSRFTKSMMLSQGQFAAFLNADANDRAGLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS V E + +++ +L +L+A+A GV LL+ E Q+L L +KQ Sbjct: 181 IYGQISEKVHEHYTASKQKLAELKAKAEGVELLSEEDKQALIDEQTELQANQKQQQAQLV 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + Q + W + + QQ+ + + Q AL +E++A L L+ ++PA LR ++ Sbjct: 241 EWQAHVEWWNAEVKNQQQHQQAIEHHQLALDKEKQASEPLHRLAQSEPAEKLRAPYQ 297 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 257/667 (38%), Positives = 360/667 (53%), Gaps = 90/667 (13%) Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 E+ ++K+ QQ+ D+ T+ EQE L RA+L Q CPLCGST HP +E Q+L+ Sbjct: 560 ELGSQFKQLEQQVIDLTTLIEQEGE---LAKYRAELMKDQDCPLCGSTHHPLLEQSQSLD 616 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 R E + ++ E+G ++R QLD++ + + +++ + ++ QQW + Sbjct: 617 LNATMQRKKEAEQKRAEIVEQGKSVREQLDSLKVKQEHCQSQCVQFQNIVKSTQQQWSTL 676 Query: 585 TASLNITL---------QPLDDIQPWLDAQDEHERQLRLLSQR---HELQGQIAAHNQQI 632 + +TL Q + + + L A +E +Q+R ++ H+ Q Q A H Sbjct: 677 LEATQLTLNLGDTDTINQSITECEALLTALNEQVKQVRQADEKYRAHQNQLQQAQHRLDT 736 Query: 633 I--------------------------QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESW 666 + Q QQ + +Q L+ + P+ E ESW Sbjct: 737 VTAGLEYDRKSHQVAAQLQLDDSVKLEQLQQHDAELKQQLVAEIEQTGFNAPKLAEIESW 796 Query: 667 LATRQQEAQSWQQR--------------QNELTALQNRIQQLTPILET------LPQSD- 705 ++Q+ Q QQ+ Q+E L ++ +LT L+T L SD Sbjct: 797 FTQKEQDLQRIQQQISEQQRFIQQQQKLQSEHGHLSEQLSELTNQLKTTQAENVLLTSDL 856 Query: 706 --------ELPHCEETVVL--ENWRQVHEQCLALHSQQQTLQ----QQDVLAAQ--SLQK 749 EL +E V E +++ + + QQ LQ + V+ + SL++ Sbjct: 857 EQQKAKRVELFGMQEVKVARSEMVKKLGDSEQRYQAGQQKLQIRVQELAVIEGKLTSLKQ 916 Query: 750 AQAQFDT-----------ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 + A D AL S F+ + F AAL+ E+ QL LK ++ + Sbjct: 917 SHANNDKLTAERSGVWKEALLHSPFETLELFQAALISEEERQQLLDLKTEIQQAIERTSA 976 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 L+ +T QH Q P + + ++ ELAQ +GEI Q L+ D + Sbjct: 977 LLDSAKQTKEQHYQ-MPKATEWQLMPKDTVESELAQVKSISESLVKREGEIAQALRSDDE 1035 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 + Q+TL + I + +D YL+SLIGS++GDKFRKFAQGLTL+NLV+LAN+QLTRL Sbjct: 1036 RKTNQKTLFEAIEAYQSEYDDIQYLHSLIGSQKGDKFRKFAQGLTLENLVYLANKQLTRL 1095 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRID 978 HGRY L+RKAS+ LE++V+DTWQ D VRDT+TLSGGESFLVSLALALALSDLVSHKT ID Sbjct: 1096 HGRYELKRKASDGLELQVLDTWQGDVVRDTKTLSGGESFLVSLALALALSDLVSHKTSID 1155 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 SLFLDEGFGTLDSETLD ALDALD LNASGK IGVISH+EAMKERIPVQIKV K +GLG Sbjct: 1156 SLFLDEGFGTLDSETLDMALDALDNLNASGKMIGVISHIEAMKERIPVQIKVTKRSGLGV 1215 Query: 1039 SKLESTF 1045 S+LE + Sbjct: 1216 SELEKQY 1222 >UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Q89_PSEA6 Length = 1232 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 172/337 (51%), Positives = 225/337 (66%), Gaps = 7/337 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL+ NLNSLKG+WKIDF + PFA NG+FAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S + N++MTR TAEC AEVEFEVKG AYRAFWS R+ +PDG LQ VEL A Sbjct: 61 LGALSANNNEIMTRGTAECSAEVEFEVKGMAYRAFWSMRRSHGKPDGKLQAAVVELGDVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA ++K K EL +TGLD+GRFT+SM+LSQG+FAAFLNA K+RAELLEELTGTE Sbjct: 121 SEKVLASQIKKKSELIEQITGLDFGRFTKSMMLSQGEFAAFLNADEKQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V + + A+ +L +L+AQA GV LL+ +Q Q+L Q L ++K+ Sbjct: 181 IYGLISERVHQHYSQAKQQLAELEAQAKGVQLLSEDQKQALMDEQQDLQGQQKERQIHIS 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +Q+ +NW + D Q + L QA E+E+ + L L+ + P+ LR +E + Sbjct: 241 AKQEHVNWWQQLDSAQSAQQQATLQLTQAQHEKEQQKEALQRLANSHPSEALRAPFELLT 300 Query: 301 EHSA-------ALAHIRQQIEEVNTRLQSTMALRASI 330 + A AL +QQ++ + L + + ++ Sbjct: 301 DAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAV 337 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 206/458 (44%), Positives = 266/458 (58%), Gaps = 59/458 (12%) Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE-------------------- 683 Q LLT + + T P+ D WL +++Q+A+ W+ N+ Sbjct: 781 QSLLTHIQQHGYTPPEADNLLQWLTSKEQDAKQWEHHDNQRNEATVQIDKLTSAQQHQLS 840 Query: 684 --------LTALQNRIQQLTPILETLPQ------SDELPHCEETVVLENWRQV---HEQC 726 LTA++ + Q L LE+L +D+ E + E R + HE Sbjct: 841 LSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSLFADKSVKTERETLSETLRTLEARHE-- 898 Query: 727 LALHSQQQTLQQQ--------DVLAAQS--------LQKAQAQFDTALQASVFDDQQAFL 770 H+QQQ Q++ +V AQ+ L+ Q ++ T L AS F DQQAF Sbjct: 899 ---HAQQQMRQKEQEHNTHLANVQNAQTQLQQNQTRLKTRQNEWQTKLLASPFADQQAFE 955 Query: 771 AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ 830 AAL+DE T L+ LKQ L++ + Q L+ Q + H L I+ Sbjct: 956 AALLDEATRATLQTLKQTLDDNLAKYQALLEQANTQVKTLLAHNNATQWQLQTRDAVIEA 1015 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSK 890 A T ++ + N +GEI Q L D +QQ+L QI + E YL+SLIGS+ Sbjct: 1016 LNALTEEQHKGNK-REGEISQALNFDKQRSSEQQSLFSQIELQRNEFEHIHYLHSLIGSQ 1074 Query: 891 EGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRT 950 +GDKFR FAQGLTLDNL++LAN+QL RLHGRYLL+RKA +L + V+DTWQ D RDT+T Sbjct: 1075 KGDKFRTFAQGLTLDNLMYLANKQLERLHGRYLLKRKADASLALSVIDTWQGDIQRDTKT 1134 Query: 951 LSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKT 1010 LSGGESFLVSLALALALS+LVSHKT IDSLFLDEGFGTLDSETLD ALDALD L+ASGK Sbjct: 1135 LSGGESFLVSLALALALSELVSHKTSIDSLFLDEGFGTLDSETLDIALDALDNLHASGKM 1194 Query: 1011 IGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 IGVISHVEAMKERI Q+ V K +GLG S+L+ +AV+ Sbjct: 1195 IGVISHVEAMKERIVAQLAVTKKSGLGVSELDQRYAVR 1232 >UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=Q480G6_COLP3 Length = 1308 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 154/250 (61%), Positives = 194/250 (77%), Gaps = 2/250 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR +N+NSLKG WKIDF+ PF +NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLRFENINSLKGSWKIDFSEAPFDNNGLFAITGPTGAGKTTILDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ VS+ QN LMTR T+ C+AEVEFEV+G+ YRAFWSQ RARN+ DGNL P ELA+ Sbjct: 61 LT-VSKKQNQLMTRHTSHCMAEVEFEVRGQGYRAFWSQKRARNKLDGNLLEPVAELAKL- 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I++DK+K + LTGL++ RFT+SM+LSQG+FAAFL ++P +RA+LLE+LTGTE Sbjct: 119 DGTIVSDKLKMVRSDISELTGLNFSRFTKSMMLSQGEFAAFLTSQPNDRAQLLEQLTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VF+ H+SA L+ LQAQ+ GV+LL EQV++L L +T++EK + Q Sbjct: 179 IYGDISKQVFDNHRSASEALKLLQAQSQGVSLLDDEQVKALEQQLTEITEQEKTVNAQLQ 238 Query: 241 QEQQSLNWLT 250 Q QQ W T Sbjct: 239 QAQQVKAWCT 248 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 154/290 (53%), Positives = 207/290 (71%), Gaps = 2/290 (0%) Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE-TLAQH-QQHRP 815 L S F D++ FL AL+ + L +L ++++ ++QA+ L++Q+ + TL + Q+ Sbjct: 1011 LTDSKFTDEEEFLLALLSAERKHDLTKLANDIDDSKKQAKILLSQSEKITLELNVQKDTL 1070 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 + A+ + + L L++ + G+ QQ++QD N+ QQ+TL++QI Sbjct: 1071 SEKGAVDFVESSVSESLVNLSDLLKQCQQNIGQFSQQIEQDNSNKIQQKTLLEQIKLAQD 1130 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 ++D +LN+LIGS +G KFRKFAQGLTL NLVHLAN QL RL GRY LQ + ++ LE+E Sbjct: 1131 ALDDLSHLNALIGSADGAKFRKFAQGLTLANLVHLANAQLERLFGRYQLQCQQNDTLELE 1190 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 V+DTWQ D RD +TLSGGESFL+SLALALALSDLVS+KT IDSLFLDEGFGTLD+ TL+ Sbjct: 1191 VLDTWQGDTARDIKTLSGGESFLISLALALALSDLVSNKTSIDSLFLDEGFGTLDNNTLE 1250 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 ALDALD LNASGK IGVISHV+A+KERI VQIKVKK++GLG S L+ + Sbjct: 1251 VALDALDNLNASGKMIGVISHVDALKERIGVQIKVKKLSGLGVSSLDKQY 1300 >UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroides RepID=C6I6N0_9BACE Length = 987 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 324/1087 (29%), Positives = 528/1087 (48%), Gaps = 160/1087 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL S++G ++IDF EP S G+FAI+GPTGAGK+T+LDA+CLALY +TPR Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 Query: 61 ---------LSNVSQSQ------NDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQ 104 +S++ +S+ +++ R T E AEV+F G YR+ WS R ++ Sbjct: 61 FSASVESLYMSDIGESRVNQADVKNILRRGTGEGFAEVDFLGASGHCYRSRWSVRRTGSR 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G L+ +++ + L K+ L TL GL Y +FTR++LL+Q FA FL + Sbjct: 121 ANGALRSQTIQVTDLTANQELQGTRKELLAQLVTLVGLTYEQFTRTVLLAQNDFATFLKS 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 + +AELLE+LTGTEIY +IS+ ++ + K+A EL +L++ A+ + LL+ E++ Sbjct: 181 RESAKAELLEKLTGTEIYSRISSEIYLRSKTADAELNQLKSNATLIELLSEEEIT----- 235 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQD------ELQQEASRRQQALQQALAEEEKAQP 278 +L E++ L ++Q ++L L Q +LQQE +R + +Q +EEK+ Sbjct: 236 --LLRTEKESLTNLREQGSKALIDLNAQLSVLHTLKLQQE--QRDKKVQDMRLDEEKS-- 289 Query: 279 QLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA--K 336 + LR + R S +L R Q E V L L I+ + K Sbjct: 290 -----------KKLREEYTR---QSDSLIRFRGQCEAVQPDLSRARELDVQIQSLVSQSK 335 Query: 337 QSAE-LQQQQQSLNTWLQE--------HDRFRQWNNEPAGWRAQFSQQT-----SDREHL 382 Q E LQ ++++N + H N +++T S R L Sbjct: 336 QVEEILQGAEKAVNAQANKLQSVQGALHTSCHSLKNLTGEIELPVTEETGLFLESVRNRL 395 Query: 383 RQWQQQLT----HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQ 438 ++ + QL E ++N L A + DE A + + + RQ ++ + + Sbjct: 396 KEQEDQLAILQEKNEARVNRLNAFGIEAVTDEQARWMQEQTRLQNARQQMLEWR-KAGTE 454 Query: 439 QKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTLEA 495 +RL Q + + QEQ ++ L + R EK +L ++ + E ARI K + Sbjct: 455 AERLKAQQEEMGH-KQEQMRKEITL--LTTRLSEKEAELKVLQRLFEN-ARIAMGKDVRT 510 Query: 496 QRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDA 555 R L+ +PCP+CG T HP Y+ E V S +E E + Sbjct: 511 LRQNLRENEPCPVCGGTDHP----YRN-EEQVVHSLYQNIEQEYQ--------------T 551 Query: 556 ITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ---DEHERQL 612 + + Q+ N +L+QD L++ +T L LQ + +P + + D E+QL Sbjct: 552 ASAEYQQLNNRNIALKQDLLHLSELSGEITVQLQAFLQEAEQKRPSSEEEQNPDYFEKQL 611 Query: 613 RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQ 672 H +QG++ +++ QY Q ++ QQ E + T + Sbjct: 612 ------HTVQGKLNLLAEKMHQYHQLYKEWQQ------------------HEGQIRTARS 647 Query: 673 EAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQ 732 ++ ++ L +QQ+ E EL ET E +R V EQ + L + Sbjct: 648 ACEALREGVARCHLL---MQQVLAAKEQF----ELLKTAETTAREQFRVVSEQLITLRQE 700 Query: 733 QQTLQQQDVLAAQSLQKAQAQF---DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 + L L +S++ A+A + L SV EQ + E+++ + Sbjct: 701 RAPL-----LKGKSVEDAEAAIRKKEKQLNDSV-------------EQVRKEGEEVQSRI 742 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + + + L + E + + +Q + L T+ Q + +T ++L + Sbjct: 743 SGMQGEIRQLNSSIDELMLRKEQIADPEHLPETIARRQATNQ--ETERRL-------STV 793 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 +L Q NR++ + L Q++ + + WG LN LIGS +G KF+ AQ TL+ L+ Sbjct: 794 EARLLQQEQNRKKLKQLEQELTEKQETANRWGKLNKLIGSADGTKFKVIAQSYTLNLLLM 853 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 AN+ L+ L RY LQ + L ++V+D D VR +LSGGESFL+SLALAL LS Sbjct: 854 HANKHLSYLSKRYRLQ-QVPGTLALQVIDCDMCDEVRTVYSLSGGESFLISLALALGLSS 912 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 L S+ +++SLF+DEGFG+LD+++L T ++AL+ L G+ IGVISHV+ M ERI VQ++ Sbjct: 913 LSSNNLKVESLFIDEGFGSLDADSLRTVMEALEQLQMQGRKIGVISHVQEMSERIAVQVQ 972 Query: 1030 VKK-ING 1035 + + NG Sbjct: 973 LHRAANG 979 >UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales RepID=B7VP61_VIBSL Length = 1240 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 152/294 (51%), Positives = 204/294 (69%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NLNSLKG WK+DFT+ PFA NGLFAITGPTGAGKTT+LDAICLAL+H TPR Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++++ N+LMTR T EC AE+EFEV+G+ YR+ + Q RAR + DG LQ P E A Sbjct: 61 LKSIAKGNNELMTRGTGECFAELEFEVQGKTYRSNFHQKRARGKHDGALQTPTCEFADAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+L + K +L +TGLD+ RFT+S++LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 TDKVLETMLTKKTKLVEQVTGLDFSRFTKSIMLSQGEFAAFLNANANDRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +Y IS +++ KS+ L L+A+A GV+LL+ EQ+Q LTA + L E+K+L + Sbjct: 181 VYSLISERIYDHFKSSEESLNHLKAKAEGVSLLSEEQIQELTAERETLEAEQKRLAEQLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + Q L+W + +Q + + L+ A E ++ QP L L+ ++PA LRP Sbjct: 241 EWQAHLSWWKDVTKAEQTIATSEHDLKTAQDELDRNQPSLERLANSEPAEKLRP 294 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 254/695 (36%), Positives = 350/695 (50%), Gaps = 129/695 (18%) Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + +RYKEK L + + +QE L RA L++G CPLCGST H ++E Sbjct: 560 LVERYKEKETSLERLTRLIDQEGE---LAKYRAALESGSECPLCGSTDH-------SIEQ 609 Query: 526 GVNQSRLLA---LEN-EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + + L+A EN E+ + +EG R QLD++ + ++ Q + D Q W Sbjct: 610 SQDTANLVAQKETENLELTAIKKEGQEHRQQLDSLAPMIAALNDDIQRAQADIQQAQLNW 669 Query: 582 QAVTASLNITLQPLDDIQPWL------------------------------------DAQ 605 Q V L +L P L DA+ Sbjct: 670 QGVVGKLQHSLSDFVGTAPELALLTINDLGNEAIVATFAQQCEVQLSQFSQQLKALADAK 729 Query: 606 -----------------DEHERQLRLLSQR-HELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 D+ + L L QR +L Q + N+Q+ Q Q EQ+ L Sbjct: 730 AHYAEAEKQRLSASVMADKAQSNLELAEQRLADLNKQNHSTNEQVAQIAQTKEQQWNALK 789 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQR-------------QN-ELTALQNRIQQ 693 ++ A+ P+ + + W + Q + +WQQ QN EL L +++ Sbjct: 790 ESIVQTAIEAPELEHIDDWFTAKSQASSTWQQTKQQQADIEKQLITQNAELKTLDDKLSS 849 Query: 694 LTPILETLPQSDELPHCEETVVLENWR-----------------------QVHEQCLALH 730 + L TL Q E ++VLE R +V E A Sbjct: 850 VEKELATLTQQSE------SLVLELTRISAERTELFGDKDIQATSNAMKQKVTEAVNAFD 903 Query: 731 SQQ----------QTLQQQDVLAAQSLQKAQAQFD-------TALQASVFDDQQAFLAAL 773 + Q +T Q + + ++ L Q+ + AL+ S F+D+ F AAL Sbjct: 904 AAQLVLNRSELEHRTEQTKHISFSEELTSKQSSYTQASNAWLEALKTSPFEDEVNFEAAL 963 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 +DE+ TQL+ LK++L+ AQ + T + Q H +Q +E Sbjct: 964 LDEEVRTQLQSLKKSLDEAIVSAQARLNTAKATQVELQNHVNAKAWQEQEQDQQQVEEAT 1023 Query: 834 QTHQKLREN-TTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 Q +++ T G I L+ D+ NR QQ L +QI + + +D LNSLIGSK G Sbjct: 1024 TECQNAQQSHATKIGAISANLETDSQNRSNQQDLFKQIDEQQVEFDDISRLNSLIGSKNG 1083 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLS 952 DKFRKFAQGLTL+NLV+LAN+QL RLHGRY L+RKA + LE++V+DTWQ D +RDT+TLS Sbjct: 1084 DKFRKFAQGLTLENLVYLANKQLQRLHGRYELKRKADDGLELQVLDTWQGDVMRDTKTLS 1143 Query: 953 GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 GGESFLVSLALALALSDLVS+KT IDSLFLDEGFGTLDS+TLD AL+ALD LNASGK IG Sbjct: 1144 GGESFLVSLALALALSDLVSYKTSIDSLFLDEGFGTLDSDTLDIALNALDNLNASGKMIG 1203 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 VISHVEA+KER+PVQ+KV K +GLG S++E + V Sbjct: 1204 VISHVEALKERVPVQLKVTKHSGLGVSEMEKQYKV 1238 >UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacteria RepID=Q47ER6_DECAR Length = 1155 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 256/650 (39%), Positives = 346/650 (53%), Gaps = 70/650 (10%) Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 AL +R+++KE Q+AD + + EQE RI++LE R QLQ G+ CPLCG+ HPA+ Y Sbjct: 504 ALVALREQHKELAAQVADKQKLLEQERRIQSLETHRRQLQPGEACPLCGAHEHPAIADYA 563 Query: 522 ALEPGVNQSRL----LALENEVKK----LGEEGATLRGQLDAITKQLQRDENEAQS---- 569 AL+ ++ L LE V+K E+ AT Q + + +Q + + A++ Sbjct: 564 ALDVSATETALKEKQALLEALVQKGQQAKTEQAATQATQKEWLAQQAKTTQEIARAQAEW 623 Query: 570 ------LRQDEQALTQQWQ---AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 L + T WQ + ++ N Q L + L A D+ E+ L + Sbjct: 624 TEFLAGLSSETPLATDAWQEAQTLASARNAAEQALAKLADRLKAADQGEQALNAARKTAT 683 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE-------------------- 660 Q + ++ QQ Q QL T L A TL QE Sbjct: 684 EAAQTLLNASNQLKLLQQTAQTTQLRQTELAKAAQTLTQERAELDSKLAATLTDAGYETP 743 Query: 661 DEEESWLATRQQEAQSWQQ---RQNELTAL----QNRIQQL-----------------TP 696 DE WL R E WQQ R++EL + Q+R P Sbjct: 744 DEPTIWLQERDGEWLHWQQTQKRRHELAEILIKQQDRFDAAQTQAAQWLERWKTQAAKRP 803 Query: 697 ILETLPQSDEL---PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + E P+ DE P T E + +Q A +Q L+ +++ +A Sbjct: 804 VAEQEPRPDEATDDPAAALTRSAETIADLTQQLAAQQGRQTQLETNVTQQKKAVDEASTA 863 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + TAL AS F D A+ AAL+ +L+QLK+ + ++QA+ ++ E L + Q Sbjct: 864 WQTALAASPFADLAAYAAALLPTDERQRLQQLKEARQLAKQQAEAVLKAAGEKLLRLQTT 923 Query: 814 RP--DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 P D + + +++ LAQ RE + G R L +D RQ QQ L + IA Sbjct: 924 PPPQDSAESPIPPLAELEAALAQLETSRRELSEQLGAQRALLTRDEQARQSQQALFKDIA 983 Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEA 931 T + + W L+SLIGS GDKFRKFAQGLTLD+L+HLAN L RLHGRYLL+RK + Sbjct: 984 AQTAESDLWQRLDSLIGSARGDKFRKFAQGLTLDHLLHLANSHLARLHGRYLLRRKTTGE 1043 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDS 991 LE+++VD+WQ + RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+ Sbjct: 1044 LELDIVDSWQGEVARDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDA 1103 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +TL+ AL+ALD LNASGK IGVISHVE MKERIP QI+V+K G+GYS+L Sbjct: 1104 DTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQIRVEKGGGVGYSRL 1153 >UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQH1_ACIAC Length = 1164 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 175/328 (53%), Positives = 218/328 (66%), Gaps = 13/328 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT PF+ GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILALRLKNLNSLKGEWRIDFTAPPFSEGGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + VSQ N+LMTR TA+CLAEVEFEV+G YRAFWSQ RAR++PDG LQ P+VELA+ Sbjct: 61 IGGVSQGGNELMTRHTADCLAEVEFEVRGSRYRAFWSQRRARDKPDGALQAPQVELAQVL 120 Query: 121 --DG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 DG + L KV++KL+ LTGLD+GRFT+SMLL+QG FAAFL A +RAELLEEL Sbjct: 121 SDDGAARPLTRKVQEKLQQVEALTGLDFGRFTKSMLLAQGGFAAFLEAPAGKRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGT+IYG+IS V E + ART LE +A+A GV LL + L VL DE+ Q++ Sbjct: 181 TGTDIYGKISQRVHECAREARTALESARARAGGVALLDTAERDRLVQEAAVL-DEQMQVL 239 Query: 237 TAQQQEQQS-LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + + +WL + ++ + + ++ A A + L A+PA L P Sbjct: 240 RERSAATRGERDWLVAVERARERVAEADRQVRDADAAWAARDADVQRLLRAEPAMRLDPL 299 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQST 323 H A LA + Q V +RLQ T Sbjct: 300 ------HGAWLAAV-QDERTVASRLQET 320 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 198/436 (45%), Positives = 252/436 (57%), Gaps = 54/436 (12%) Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQ---QRQNELTA-----------LQNRIQQLTPI 697 GYAL P+E E WL R ++ Q+W+ +R+ +L A + +Q T Sbjct: 739 GYAL--PRE--PEPWLRERGRDVQAWEAACRRRQDLQAQMPLLHEVAENAASVARQWTER 794 Query: 698 LETLPQSDELP---HCEETVV----------LENW--------RQVHEQCLALHSQQQTL 736 L LP P E++ + LE W R + +L + L Sbjct: 795 LAALPAPATRPDDGEAEDSAIDAGTVRDVARLEGWLQQAAQSVRSCEDTLASLGGTGREL 854 Query: 737 QQ-QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 Q+ Q A Q+ Q+A A +++A+ AS F D QAFL A M+ L++ Sbjct: 855 QRAQADAAGQARQRATA-WESAVAASPFADAQAFLDARMEPAERKALQEAVDRTRQAWTA 913 Query: 796 AQTLVTQTAETL----AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ 851 AQ L + + L A Q R ++ + ELA + QG I Sbjct: 914 AQALHGEAGQALERLLASAQSQR---------GLQDVDGELAAWESQGLAAAQRQGAIAG 964 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 QL++D R+ Q L+ +IA + E W +LN LIGS +G ++RKFAQGLTLD+LVHLA Sbjct: 965 QLREDGLRREGLQALLAEIAAQEAEAESWQHLNGLIGSADGARYRKFAQGLTLDHLVHLA 1024 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 N +L RLHGRYLL R+ LE+EVVDTWQAD RDTRTLSGGESFL SLALALALSDLV Sbjct: 1025 NLRLQRLHGRYLLARRTGGDLELEVVDTWQADVARDTRTLSGGESFLASLALALALSDLV 1084 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 SHKTRIDSLFLDEGFGTLD +TL+ ALDALD+L + GKTIG+ISHVEA+KERIPVQI+V+ Sbjct: 1085 SHKTRIDSLFLDEGFGTLDGDTLEVALDALDSLQSGGKTIGIISHVEAVKERIPVQIRVR 1144 Query: 1032 KINGLGYSKLESTFAV 1047 K GLGYS LE FAV Sbjct: 1145 KGVGLGYSALERRFAV 1160 >UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12L91_SHEDO Length = 1265 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 168/306 (54%), Positives = 209/306 (68%), Gaps = 16/306 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT PF NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKDEWKIDFTLSPFKENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S+S N+LMTR T LAEVEFEVKG+AYRAFWSQ R+R+ DGNLQ +VELA Sbjct: 61 LSVISKSTNELMTRGTGSALAEVEFEVKGKAYRAFWSQRRSRDLADGNLQDAQVELAELE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA ++K K EL ++TGLD+ RFTRSMLLSQG FAAFLNA ERAELLEELTGTE Sbjct: 121 SGVILASQIKQKTELVESITGLDFARFTRSMLLSQGDFAAFLNASANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V + + L L+ Q V LL+ E+ ++ AS L + AQ+ Sbjct: 181 IYSLISERVHLEFGEQKHRLNLLKVQLDSVKLLSAEEREAKLASALALKE-----TLAQK 235 Query: 241 QEQ-----QSLNW---LTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 Q+Q L W + Q +L +++ + QA ++A+ +E+ QL L+ ++PA+ L Sbjct: 236 QQQLLALVDCLTWCDAMQAQTQLVEQSEQGLQAAEEAIRDEKN---QLQRLADSEPAQGL 292 Query: 293 RPHWER 298 P +ER Sbjct: 293 APLFER 298 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 172/303 (56%), Positives = 215/303 (70%), Gaps = 7/303 (2%) Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 SL + Q + AL AS F D+ +F AA + + L+ LK L+ + Q Q L Q Sbjct: 960 SLTEHQQHWQNALDASPFSDEASFSAACLSQADRQALQTLKNELDTRLHQQQALAQQAKL 1019 Query: 806 TLAQHQQHRPDDGLALTVTVE---QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 L + QQ GLA + ++ E + Q ++ T +I + L +D++ + Sbjct: 1020 GLEKLQQR----GLAAEYQLSLAPALRIEHGELEQLQQQLTQELWQIERVLTEDSEQQAA 1075 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 Q +L+ Q+ Q +D YL++LIGS++GDKFRKFAQGLTLD+LV LAN+QL RLHGRY Sbjct: 1076 QGSLVSQLEAAKQSYDDMAYLHALIGSQKGDKFRKFAQGLTLDHLVALANRQLGRLHGRY 1135 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 LL+RK S+ALE++V+DTWQ DA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFL Sbjct: 1136 LLERKGSDALELQVIDTWQGDALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFL 1195 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLDSETLD ALDALD LNASGK IGVISH+EAMKERI VQIKV K+NGLG S+L+ Sbjct: 1196 DEGFGTLDSETLDMALDALDNLNASGKMIGVISHIEAMKERIDVQIKVNKMNGLGISRLQ 1255 Query: 1043 STF 1045 S + Sbjct: 1256 SQY 1258 >UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=B4RWA1_ALTMD Length = 1238 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 143/218 (65%), Positives = 170/218 (77%) Query: 4 LSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSN 63 ++LRLKNLN+LKGEWKIDFT+ PF NGLFAITGPTGAGKTTLLDAICLALYH+TPRL Sbjct: 1 MTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPRLGP 60 Query: 64 VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGK 123 +S S ND+MTR TAECLAEVEF++KG+AYRAFWS RAR + DGNLQ VELA G Sbjct: 61 ISTSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGKVDGNLQSADVELAEVESGD 120 Query: 124 ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYG 183 +LA +V+ K E LTGL++ RFT+SM+LSQG FAAFLNA +RAELLEELTGTEIYG Sbjct: 121 VLATQVRPKNEEIEKLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTEIYG 180 Query: 184 QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 QIS V +Q A+ + ++ + GVTLL+ EQ+ L Sbjct: 181 QISQAVHQQFSEAKQKKKEFAIKLEGVTLLSNEQITQL 218 Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 174/310 (56%), Positives = 218/310 (70%), Gaps = 11/310 (3%) Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA-----QTL 799 Q+L +A F+ L S F D+QAF AL+DE+T +L +L++ L Q++QA L Sbjct: 932 QALTEATENFNRQLANSPFADEQAFSNALLDEETRNKLLELQKQLTQQKQQADLKLENAL 991 Query: 800 VTQTAETLAQHQQH--RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 TQ + T H Q R + + QI ++ Q L ++ G+I+QQL + Sbjct: 992 ATQQSLTARDHAQQWQRKLEEHGMQWVENQITEQAQQKDALL----STLGQIKQQLNANN 1047 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 + R++Q+TL++++A +D YL+SLIGS GDKFR+FAQGLTLDNLV LANQQL + Sbjct: 1048 EAREKQRTLVEEMAAFETYYDDITYLHSLIGSASGDKFRRFAQGLTLDNLVQLANQQLEK 1107 Query: 918 LHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRI 977 LHGRY L RK ++ L + V+DTWQ D VRDT+TLSGGESFLVSLALALALSDLVSHKT I Sbjct: 1108 LHGRYQLIRKENDGLGLSVLDTWQGDVVRDTKTLSGGESFLVSLALALALSDLVSHKTSI 1167 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 DSLFLDEGFGTLD+ETLD ALDALD LNASGK IGVISH+EAMKERIP Q+KV K NG+G Sbjct: 1168 DSLFLDEGFGTLDAETLDVALDALDNLNASGKMIGVISHIEAMKERIPTQLKVIKRNGVG 1227 Query: 1038 YSKLESTFAV 1047 S LE +AV Sbjct: 1228 LSALEKPYAV 1237 >UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH Length = 1241 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 164/301 (54%), Positives = 201/301 (66%), Gaps = 4/301 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLKGEWKI+F +EPF SNGLFAITGPTGAGKTTLLDAI LALYH TPR Sbjct: 1 MKILSLRFKNINSLKGEWKINFDQEPFVSNGLFAITGPTGAGKTTLLDAISLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 L V+QSQN+LMTR TAECLAEVEFEVKG AYRAFW Q RA + +GNLQ P+ ELA+ Sbjct: 61 LDKVTQSQNELMTRHTAECLAEVEFEVKGVAYRAFWEQRRANYKEEGNLQAPQAELAKIN 120 Query: 120 ---ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + K+LA+K+ E ++TGLD+ RFT+SMLLSQGQFAAFLNA K RAELLEEL Sbjct: 121 RLGGEDKVLANKISQVKEKIISITGLDFDRFTKSMLLSQGQFAAFLNADDKSRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGT+IY IS +F+ + L L+ QA + LL Q L + + +L Sbjct: 181 TGTDIYRHISQTIFKHWREEEQALNTLKQQAQMMALLDATTRQELLTQQANIQTQITRLQ 240 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 QQ+ Q + W + E+QQ+ Q L +A AQP + L +PA +RP + Sbjct: 241 KEQQEYQVAKQWQEKALEIQQQQQSAQAGLYEAQQALIIAQPDIQRLEKNEPAEKIRPLY 300 Query: 297 E 297 + Sbjct: 301 D 301 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 172/302 (56%), Positives = 218/302 (72%), Gaps = 10/302 (3%) Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQL-EQLKQNLENQRRQAQTLVTQTAET 806 Q+A + AL+ S+F D+ FLA+L+ + T+L EQ KQ L+ ++ L TQ Sbjct: 932 QQATEHYQHALKESLFADENDFLASLLSVEERTRLQEQQKQRLDKLLQEKTRLETQEK-- 989 Query: 807 LAQHQQHRPDDGLALTVTVEQIQ---QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 A Q L+ T EQ +LA+ H+ L+E S ++ QL+QD + R +Q Sbjct: 990 -AYQQHLLQQPLLSTQCTAEQCNIHLDDLAKQHKALQETLFS---LQIQLRQDDEKRIEQ 1045 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL 923 QTL+ QIA+ +DW YLN L+GS GDKF +FAQGLTLD+L++LAN++L +LHGRY Sbjct: 1046 QTLLAQIAKQQAHYDDWSYLNELVGSASGDKFSRFAQGLTLDHLIYLANRRLEKLHGRYF 1105 Query: 924 LQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLD 983 LQRK + +LE+++ DTWQADA+RDTRTLSGGESFLVSL+LALALSDLVS+KT+I+SLFLD Sbjct: 1106 LQRKTTGSLELQIADTWQADALRDTRTLSGGESFLVSLSLALALSDLVSNKTQIESLFLD 1165 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFGTLD +TLD ALDALD+LNASGK IGVISHVEAMKERIPVQIKVKK GLG S+L Sbjct: 1166 EGFGTLDPDTLDIALDALDSLNASGKIIGVISHVEAMKERIPVQIKVKKAGGLGISQLAP 1225 Query: 1044 TF 1045 F Sbjct: 1226 EF 1227 >UniRef50_UPI00019103C5 exonuclease subunit SbcC n=3 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI00019103C5 Length = 265 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/266 (59%), Positives = 194/266 (72%), Gaps = 1/266 (0%) Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 TQ L + R YK K Q+LADV+TICEQEARIK LE+QRA LQ+GQPCPLCGST+HPA Sbjct: 1 TQYTQRLADKRLSYKTKAQELADVRTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPA 60 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + AYQALE NQ+R ALE EVK L EEGA LRGQLDA+T+QLQRDE+EAQSL Q+EQA Sbjct: 61 IAAYQALELSANQTRRDALEKEVKTLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQA 120 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 LT++WQ + A+L + LQP +D+ WL A +EHE+QL LSQRH LQ QIAAH +Q+ ++ Sbjct: 121 LTEEWQTLCATLGVQLQPQEDLAGWLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFT 180 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 QI QRQ L L Y L+LP ++E SWL R EA+ WQQRQ E LQ +I +L P Sbjct: 181 AQIAQRQASLTADLAQYTLSLPAPEDEASWLNERADEAKIWQQRQTEFADLQTQIDRLAP 240 Query: 697 ILETLPQSDELPHCEETVVLENWRQV 722 +LETLPQ+D ++ V L+NWRQ Sbjct: 241 LLETLPQTD-TADSDDDVPLDNWRQT 265 >UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VXU8_MARMS Length = 1247 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 154/298 (51%), Positives = 195/298 (65%), Gaps = 2/298 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LRLKNLNSLKGEW+IDFT+ PF G+FAI GPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS SQND+MTR T+ECLAEVEFE+KG+ YRAFW Q RAR Q DG LQ EL Sbjct: 61 L-KVSPSQNDVMTRHTSECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCE-R 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I+ K+ +K++ A +TGLD+ RFT+SMLL+QG F+AFLNA +RAELLEELTGTE Sbjct: 119 DGTIITTKINEKIDKIAEITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S VF++HK + + L++ LLT E L + +EK + + Sbjct: 179 IYGDVSKWVFDKHKQEKQSIAALESFNEQTQLLTNEAFAELKQTESSFEAKEKANAQSLK 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + L W + +L ++ QQ + +A PQ L A A+ L+P +E+ Sbjct: 239 THRTVLEWRRTEQKLHEQVVIYQQQVDEANQALADFAPQQRQLEQALTAQVLQPDYEK 296 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 11/138 (7%) Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 QQ +LA+L + +T Q+ + L + RQ YK+K + V+ + E E I L R Sbjct: 531 QQSQLAELDAILNAMTNGIQQQQSQLEQQRQAYKDKFRHQKSVEKLAEAERHIVALTQLR 590 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG---QLD 554 +L CPLCGS H A + G + E +LG+E +L+G QL Sbjct: 591 NELGEQDACPLCGSAEHDLANALYQADSGSQE--------EFSRLGKELDSLKGQGMQLA 642 Query: 555 AITKQLQRDENEAQSLRQ 572 A + +QR+ Q+ RQ Sbjct: 643 ADLESMQRELTSGQTRRQ 660 >UniRef50_A3YE93 ATP-dependent dsDNA exonuclease n=1 Tax=Marinomonas sp. MED121 RepID=A3YE93_9GAMM Length = 1261 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 156/287 (54%), Positives = 194/287 (67%), Gaps = 10/287 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI SLR KN+NSLKGEWK+DFT+EPF+ G+FAI G TGAGKT+LLDAICLAL+HETPR Sbjct: 1 MKICSLRFKNINSLKGEWKLDFTKEPFSEAGVFAIVGATGAGKTSLLDAICLALFHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS S N++MTR T+ECLAEVEFEVK YRAFWSQ RAR + DG LQ VEL A Sbjct: 61 L-KVSPSSNEVMTRHTSECLAEVEFEVKSTRYRAFWSQRRAREKSDGKLQPINVELC-LA 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++LA KV +KL L A +TGLD+ RFT+SMLL+QG F+AFLNA+ RAELLEELTGTE Sbjct: 119 SGEVLATKVNEKLALMAHITGLDFSRFTKSMLLAQGGFSAFLNAEANARAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +YG IS +FE+HK R L + Q L + + SL + +E+ L + Sbjct: 179 VYGDISKYIFEEHKLQRQALLLQEQQLDEFERLDEDTLISLKQQEAEFSSKEQLLKVEIE 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK----AQPQLAAL 283 ++ NWL +L Q + +Q L + LA EK +PQLA+ Sbjct: 239 DAEKRFNWL----KLWQNLTTKQTDLTENLAANEKNWESFKPQLASF 281 Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/299 (49%), Positives = 198/299 (66%), Gaps = 12/299 (4%) Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG-- 818 S FDD+ + A + + + +L K+ LE QA+ + Q + + +HQ P Sbjct: 963 SGFDDEADWQAQHLADSEMDRLAYDKKQLEEALAQAKDRLLQVKDEIEKHQASFPASSEF 1022 Query: 819 ----------LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 AL +E ++ E+ K + G+++ QLK D + + Q ++ Sbjct: 1023 IPAKVFELTEAALVHQIETLETEIKALSVKHTQEHQRYGQVKMQLKTHEDTQTKYQLGLE 1082 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKA 928 ++A+ ++ L LIG+ +G KFRKFAQ LTLDNL+HLAN++L LH RY LQRK Sbjct: 1083 KLAKARSEMALMTQLQQLIGAADGAKFRKFAQSLTLDNLLHLANKRLALLHDRYQLQRKF 1142 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGT 988 + LE+ V+DTWQAD+ RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGT Sbjct: 1143 GDKLELVVLDTWQADSERDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGT 1202 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 LDS+TLD ALDAL+ LNA+GKTIG+ISHVEA+KER+ VQ+K+ K+ GLG S+L+ +AV Sbjct: 1203 LDSQTLDIALDALELLNAAGKTIGIISHVEALKERMSVQVKLTKLPGLGISQLDKMYAV 1261 >UniRef50_Q1ZDG0 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDG0_9GAMM Length = 1233 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 154/307 (50%), Positives = 201/307 (65%), Gaps = 17/307 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR +NLNSLKG WKIDF F NGLF ITG TGAGK+T+LDA+CLALY +TPR Sbjct: 1 MKILSLRFENLNSLKGHWKIDFQSAAFIENGLFVITGQTGAGKSTILDALCLALYQQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q++N+LMTR CLAEVEF VK +AYR FW QNRAR + G LQ P ELA + Sbjct: 61 LDKLTQAKNELMTRGEGSCLAEVEFSVKDKAYRVFWGQNRARKKGSGKLQAPTCELAEQS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GK+LA K D L+ LTGLD+ RFT+SMLL+QG FAAFLNA PK+RAELLEELTGTE Sbjct: 121 -GKVLASKSSDVLKQVVELTGLDFSRFTKSMLLAQGGFAAFLNATPKDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLT-PEQVQSLTASLQVLTDEEKQLITAQ 239 IY QIS +FE++K + E L Q+ + LT PE+VQ L + +L +++QL+ Sbjct: 180 IYAQISKHIFERNKEVQAEFTLLAQQSELIDRLTGPEKVQ-LEEDIALLHSQKEQLLLRI 238 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL-------AQPARNL 292 + ++ W + E R Q+ L+ L + + A+ L + S+ AQ A L Sbjct: 239 EATNNAVLW-------KHEEGRLQEKLEDILTQLKTAEQALQSFSVQVLKIENAQQALRL 291 Query: 293 RPHWERI 299 +P + ++ Sbjct: 292 QPSFVKL 298 Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 141/301 (46%), Positives = 196/301 (65%), Gaps = 11/301 (3%) Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 ++AQ+ + L SVF F AL+DE+ L++L+ ++ + Q L T Sbjct: 934 KEAQSTLENKLLNSVFSTIDDFKVALLDEEELSRLQS-----QHTQHSDQLLAKNTQRKS 988 Query: 808 AQHQ--QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 +H+ H+ +A +T Q+E + + L T ++ L++ D ++Q Sbjct: 989 LEHEILMHQEKQLIADDMTQLIHQKETFNSQETLINETLIS---KKTLQRTDDINTEKQG 1045 Query: 866 LMQQIAQMTQQ-VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 +Q Q++Q+ +W LN LIG +G KFR+FAQGLTLDNLV+LANQ++ L RY L Sbjct: 1046 ELQIKRQLSQENALEWELLNKLIGQADGSKFREFAQGLTLDNLVYLANQEMANLDPRYQL 1105 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 +R + E L ++V+D WQA+++RD RTLSGGESFLVSL LALALS+LVSHKTRI+SLFLDE Sbjct: 1106 KRNSDEKLALQVIDCWQANSIRDVRTLSGGESFLVSLGLALALSNLVSHKTRIESLFLDE 1165 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLD TLD AL+AL+ LN++GK IG+ISHV A+KERI QI+V K G GYSKL+S Sbjct: 1166 GFGTLDENTLDIALNALERLNSTGKLIGIISHVSALKERINHQIQVHKGTGAGYSKLDSQ 1225 Query: 1045 F 1045 + Sbjct: 1226 Y 1226 >UniRef50_A1SUG5 SMC domain protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SUG5_PSYIN Length = 1234 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 155/306 (50%), Positives = 203/306 (66%), Gaps = 8/306 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+R KNLNSLKG WKIDF F NGLF ITG TGAGK+T+LDAICLALY +TPR Sbjct: 1 MKILSIRFKNLNSLKGHWKIDFQDADFLENGLFVITGQTGAGKSTILDAICLALYQQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++QS+N+LMTR T EC AEVEF VKG+ YR FW Q RAR G LQ P EL+ Sbjct: 61 LDRITQSKNELMTRGTWECSAEVEFSVKGKGYRVFWEQKRARKSAAGKLQAPICELS-LI 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G +L K + L+ LTGLD+ RFT+SMLL+QG FAAFLNA P++RAELLEELTGTE Sbjct: 120 EGDVLCTKSSEVLKQVIELTGLDFSRFTKSMLLAQGGFAAFLNASPRDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +I+ VFE++K A+ EL+ L QA + +L+ EQV L +Q+L +++ + T + Sbjct: 180 IYCEIAKHVFERNKQAQAELDLLIKQADVLEVLSEEQVDELNKQVQLLAADKQTVQTDLK 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQAL---QQALAEEEKAQPQLA----ALSLAQPARNLR 293 + +L WL L+++ + + L QQ+ AE + Q Q+ A L QP +N Sbjct: 240 DLEGALLWLKNAQVLKEQVEAQLRLLTNAQQSAAEFKNKQQQIELAQQAKRLEQPYQNQL 299 Query: 294 PHWERI 299 + E+I Sbjct: 300 LNAEKI 305 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 146/297 (49%), Positives = 192/297 (64%), Gaps = 11/297 (3%) Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 F L S F DQ F+ A + E+ L L L++ L Q +T ++ ++L +H Sbjct: 942 FKKQLITSPFIDQTDFINARLAEEPLQVLLALQKQLHEQLLTEKTRLSSAQQSLEKH--- 998 Query: 814 RPDDGLALTVTVEQ-IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 L L+VT E + E AQ + + + + ++ K AD R + Q Q Sbjct: 999 -----LKLSVTEEDPLVLENAQAANQEKSEVIGEQLVEKKGKLQADIRLKAQQQALLDQQ 1053 Query: 873 MTQQ--VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 + Q+ E W LN LIGS +G KFR FAQGLTLDNLV+LAN+++ LH RY LQR E Sbjct: 1054 VQQKDSAEQWAMLNKLIGSADGSKFRTFAQGLTLDNLVYLANKEMADLHQRYQLQRNLDE 1113 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 L ++V+D WQA+AVRD +TLSGGESFLVSL LALALS+LVSHKT+I+SLFLDEGFGTLD Sbjct: 1114 PLALQVIDLWQANAVRDVKTLSGGESFLVSLGLALALSNLVSHKTQIESLFLDEGFGTLD 1173 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 ++TL+ ALDAL+ LNA+GK IGVISHV+A+KERI QI V K +G GYS+L+ + Sbjct: 1174 ADTLEIALDALERLNATGKLIGVISHVDALKERINKQIHVSKGSGAGYSQLDKQYVF 1230 >UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Nitrosomonas europaea RepID=Q82UT3_NITEU Length = 1087 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 143/299 (47%), Positives = 185/299 (61%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +RLKNLNSL GEW+IDFT F S+G+F+ITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MQILQVRLKNLNSLVGEWEIDFTDPAFVSDGIFSITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS+S+N++M+R T EC AEV F + +R WSQ+RA +PDG LQ PR ELA Sbjct: 61 LGKVSKSENEIMSRQTGECFAEVTFAAQSGCFRCHWSQHRAHKKPDGELQNPRHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++ + +TG+D+ RFTRSMLL+QG+FAAFL A P ERA +LE++TGTE Sbjct: 121 SGKILETRLTEVGRQIEKITGMDFARFTRSMLLAQGEFAAFLQAAPDERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E SAR EL++L A +G+ LT Q L ++ L Sbjct: 181 IYSRISIRVHETRVSARRELDRLSAGLNGIQPLTRADEQQFHTDLAQKIQQDAGLNEQIA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 E+Q L WL L+ E Q L+ +E P ++ L A A L + R+ Sbjct: 241 HERQILVWLENIARLESELHLIAGQQQAWLSRKEALTPDISKLDSASRALELLGEYSRL 299 >UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J7H7_COMTE Length = 1143 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 186/376 (49%), Positives = 237/376 (63%), Gaps = 27/376 (7%) Query: 672 QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHS 731 Q+A+ W QR L + T+P + L C V+LE Q +Q L Sbjct: 787 QDAEHWLQRSQALPDMSA-----DATAYTVPAAATLQDCR--VLLE---QTAQQLARLQG 836 Query: 732 Q----QQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQ 787 Q Q TL+Q QS ++AQA++ ALQAS F D+ + AAL+ + L+ L Sbjct: 837 QASQAQATLEQ----LQQSTRQAQAEWQQALQASPFSDEAQYTAALLSDAEQQGLQALSN 892 Query: 788 NLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT--VEQIQQELAQTHQKLRENTTS 845 L+ ++A L ++ L Q D T+T + Q++ E AQ ++L Sbjct: 893 QLQGAAQRAAALQADASQRLTALQTQALSDEAPETITEQITQLETERAQQAEQL------ 946 Query: 846 QGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLD 905 G R +LK D D R QQ L+ +IA+ Q + W +L+SLIGS GDKFRKFAQGLTLD Sbjct: 947 -GAHRARLKDDDDRRAGQQALLARIAEQEQDSDLWQHLDSLIGSARGDKFRKFAQGLTLD 1005 Query: 906 NLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 +L+HLAN+ L RLHGRYLL+RK + LE+++VD WQ D RDTRTLSGGE+FLVSLALAL Sbjct: 1006 HLLHLANRHLERLHGRYLLRRKPTGELELDIVDGWQGDVARDTRTLSGGEAFLVSLALAL 1065 Query: 966 ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 ALSDLVS KT IDSLFLDEGFGTLD +TL+ AL ALD LNASGK IGVISHVEA+KERIP Sbjct: 1066 ALSDLVSSKTSIDSLFLDEGFGTLDGDTLEMALAALDTLNASGKMIGVISHVEALKERIP 1125 Query: 1026 VQIKVKKINGLGYSKL 1041 QI+V+K G+GYS+L Sbjct: 1126 AQIRVEKAAGIGYSRL 1141 >UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRE3_SYNAS Length = 1223 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/258 (49%), Positives = 174/258 (67%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +R KNLNSL GEW++DFTR + S+G+FAITGPTG+GKTTL+DA+CLALY TPR Sbjct: 1 MRILGVRFKNLNSLAGEWQVDFTRPAYISDGIFAITGPTGSGKTTLMDAVCLALYGSTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T EC AEV FE YR WSQ RA +PDG LQ R E+ Sbjct: 61 LGKVTKSGNEIMSRQTGECFAEVTFETAKGRYRCHWSQQRAYKKPDGELQQARHEIVDAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++L K+ + +TGLD+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTE Sbjct: 121 SGRVLKSKINEVGTFIEKVTGLDFERFTRSMLLAQGGFAAFLQAPPHERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ +LE LQA+ G+ +L+ E+ ++L +L+ D E +L + Sbjct: 181 IYSRISMKVHERRSEELDKLELLQAELKGIAILSEEEERALQDTLRKKQDWETELAGRIK 240 Query: 241 QEQQSLNWLTRQDELQQE 258 + +++L WL L++E Sbjct: 241 EGEKALAWLEGMAVLEKE 258 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 5/314 (1%) Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 EN ++ ++ L + +LQ + A L K + +D L+ S F D+ FL++ + E Sbjct: 897 ENCGKIEKEISMLRERIVSLQIRTKQRAGELMKTKQHWDDRLRRSGFADESDFLSSCLTE 956 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + L + KQ L ++ + +TLA Q+ + D + E +++++ Sbjct: 957 EERQGLLEKKQILLREKAELDARRQDRLDTLAVQQEKKLTDQ-----SSEVLKEQIRTGD 1011 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 +L++ G + Q L + R+ Q +Q+I + ++ W L+ LIGS +G KFR Sbjct: 1012 MELKQLRLDIGGMVQNLSDNESRRKNLQERLQRIDRQKRECARWDDLHQLIGSADGRKFR 1071 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 FAQGLT + + AN++L + RYLL + LE+ V+D +QA +R T+ LSGGES Sbjct: 1072 NFAQGLTFEMMTVHANRRLREMTDRYLLIHDEAHPLELNVIDNYQAGEIRSTKNLSGGES 1131 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 F+VSLALAL LS + S R+DSLFLDEGFGTLD + L+TAL+ L L GK IG+ISH Sbjct: 1132 FIVSLALALGLSQMASRNVRVDSLFLDEGFGTLDEDALETALETLAGLRQDGKLIGIISH 1191 Query: 1017 VEAMKERIPVQIKV 1030 V A+KERI QI+V Sbjct: 1192 VAALKERIGTQIQV 1205 >UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales RepID=A1AS54_PELPD Length = 1230 Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 199/327 (60%), Gaps = 13/327 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL G+W +D T + S+G+FAITGPTGAGKTT+LDAICLALY +TPR Sbjct: 1 MKILRLSFRNLNSLAGDWDLDLTHPAYVSSGIFAITGPTGAGKTTILDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q +N++M+R + +C AEVEFE +R WSQ+R+R +PDG LQ PR E+A Sbjct: 61 LGRITQGENEIMSRQSGDCSAEVEFETGHGRFRCHWSQHRSRRRPDGQLQQPRHEIAEAE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++K +TG+D+ RFTRSMLL+QG FAAFL A+P ERA +LE++TGT Sbjct: 121 SGKILESRLKGVATRVEEVTGMDFDRFTRSMLLAQGGFAAFLQARPDERAPILEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ R L +++A+ G+ LL+PE+ Q L + E L + Sbjct: 181 IYSRISIKVHERTTEERNRLTEMRAELEGIRLLSPEEEQELLLAKTERKQRESTLNSEAG 240 Query: 241 QEQQSLNW---LTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 +++L W + + + QQA Q+ E A PQL L+LA A L Sbjct: 241 AIRETLAWQERIALLQQELLQLDNEQQAFQE---RREAAAPQLEKLALAGRALKL----- 292 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTM 324 +H A L +R Q +E T L++ M Sbjct: 293 -GGDH-AHLLLLRSQQQEEQTELRTAM 317 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 128/299 (42%), Positives = 180/299 (60%), Gaps = 8/299 (2%) Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 + + + +A F LQ S F D+ A+L A + ++ +L + L T + Sbjct: 930 GEEISRREAAFLAQLQESGFSDETAYLHACLPQERFDELTRWADELARDETSITTRLRDR 989 Query: 804 AETLAQHQQHRPDDGLALTV-TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 ETL + + LT ++EQI +E A +L E G I QQL+Q A+ Q+ Sbjct: 990 QETLRRETERN------LTAKSLEQIHEEHAALASQLGELQKELGAIDQQLRQHAEQLQR 1043 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 Q+ +Q+I Q + + W L SLIGS +G KFR FAQGLT + +V AN+QL+++ RY Sbjct: 1044 HQSRLQEIRQQGHECQRWELLRSLIGSSDGKKFRNFAQGLTFELMVAHANRQLSKMSDRY 1103 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 +L R +E LE+ V+D +QA +R T+ LSGGESF+VSLAL+L LS + S R+DSLFL Sbjct: 1104 ILVRDTAEPLELNVIDNYQAGEIRSTKNLSGGESFIVSLALSLGLSRMASRNVRVDSLFL 1163 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 DEGFGTLD + L+TAL+ L L GK IG+ISHV A+KERI +I+V+ NG G S L Sbjct: 1164 DEGFGTLDEDALETALETLAGLQQEGKLIGIISHVPALKERIGARIQVEAGNG-GRSTL 1221 Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 R+++LE R QL G CPLCG+T HP A +P + L E K GE + Sbjct: 583 RVRSLEEDRKQLVDGVACPLCGATRHPYA-AGTVPQPDQARQELETALEESGKAGELLSR 641 Query: 549 LRGQLDAITKQLQR 562 +R + A+ K LQR Sbjct: 642 VRQEQVAVQKDLQR 655 >UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG58_CHLPD Length = 1224 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 125/249 (50%), Positives = 170/249 (68%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KNLNSL GEW IDF+ + S+G+FAITGPTG+GK+T+LDAI LALY +TPR Sbjct: 1 MKILSLRFKNLNSLVGEWFIDFSAPEYVSDGIFAITGPTGSGKSTILDAISLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+ S N++M+R T EC AEV FE +R W+Q+RAR P G LQ + E+A Sbjct: 61 LEKVNSSTNEIMSRHTGECFAEVVFETGTGRFRCHWAQHRARRHPLGILQAQKHEIADAL 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+++ K++D L+ TG+D+ +FTRSMLL+QG FA FL + P ERA +LE++TGT Sbjct: 121 TGRVIETKLQDTLQAVVERTGMDFDQFTRSMLLAQGGFAVFLQSPPDERAPVLEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E++++ + ELE L+ + SG+ LL + +Q+ A LQ DEE +I Q Sbjct: 181 IYSAISVKVHERNRAEQQELETLRVECSGIILLDDDALQAAKAELQAKLDEEAGIINRQS 240 Query: 241 QEQQSLNWL 249 + + SL WL Sbjct: 241 EAEASLRWL 249 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 123/298 (41%), Positives = 177/298 (59%), Gaps = 17/298 (5%) Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 A +++ +A F L S FD F+++ +D + L QLEQ ++L +R + +TL + Sbjct: 922 AMKIREKEALFLQELSESGFDGMGGFVSSRLDREELEQLEQQAKDLAARRLELETLRGER 981 Query: 804 AETLAQHQQHRPDDGLALT-VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 L R ++ ALT + E++Q+EL +L + ++ L + + Sbjct: 982 QYKL------RMEEDRALTENSPEELQEELDALFGRLDIVRSDTASVKLHLYE-----HE 1030 Query: 863 QQTLM---QQIAQMTQQVE--DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 Q +M + IA + +Q+E W L+ LIGS +G KFR FAQGLT + +VH AN+QL Sbjct: 1031 QAAVMLREKTIALVARQIECSRWSLLHELIGSSDGKKFRNFAQGLTFEIMVHHANRQLMN 1090 Query: 918 LHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRI 977 + RYLL R LE+ V+D +Q +R T+ LSGGESFLVSLALAL LS + S + Sbjct: 1091 MTDRYLLVRDVQRPLELNVIDNYQGGEIRSTKNLSGGESFLVSLALALGLSQMSSRNVSV 1150 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 DSLFLDEGFGTLD + L+TAL L L+ SGK IG+ISHV ++ERI +I+VK +NG Sbjct: 1151 DSLFLDEGFGTLDEDALETALQTLAGLHESGKLIGIISHVPVLRERIGTRIEVKPLNG 1208 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 19/172 (11%) Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 ++Q+ E+ R L E ++ E Q+ A++ +I++LE +R L G PCP Sbjct: 548 SVQSRVAEEIDRLVLLQEKAEQVVEALQREAELYL------KIRSLEDERKVLLYGSPCP 601 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 LCGS HP + EP L + V ++ E+ LR + K +E + Sbjct: 602 LCGSRHHPWADG-AVPEPSAEGEELQHAKASVLEISEKITALRIEAAGAIKDRAHNEEQI 660 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 LR L AV +L + L+ D+ E+ LRLLS+ H Sbjct: 661 AELR----ILLSGEDAVCRNLAVQLEIAGDLNA--------EQVLRLLSEAH 700 >UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYK7_9GAMM Length = 1261 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/234 (53%), Positives = 159/234 (67%), Gaps = 4/234 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR +NLNSL+GEW+IDF +A G+FAITG TGAGK+T+LDAICLALY TPR Sbjct: 1 MRILKLRFQNLNSLQGEWEIDFRHAAYADEGIFAITGSTGAGKSTILDAICLALYGATPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA--- 117 L ++QS+NDLM+R T ECL+EV F K +YR W Q RAR P+GNLQ P E+A Sbjct: 61 LGEITQSKNDLMSRHTGECLSEVIFTTKSGSYRCTWLQKRARKNPEGNLQSPTHEIAPFT 120 Query: 118 -RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 AD L + + +L A TG+D+ RFTR+MLL+QG FAAFL A ER+ LLEE+ Sbjct: 121 DDAADLPPLETQTRKTRKLVAEFTGMDFDRFTRAMLLAQGSFAAFLQANSDERSNLLEEI 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 TGTEIYG IS V E + EL+ L + SG+T+L+ E+V SLT+ L D Sbjct: 181 TGTEIYGDISKKVHEFKTQSDAELKTLTDRLSGMTVLSDEEVHSLTSQKNALVD 234 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 172/286 (60%), Gaps = 12/286 (4%) Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F D + A++ + +L+QL L + +++ L+++ A+ + Q + P L+L Sbjct: 980 FVDDADYRTAVLVDTERERLQQLANQLHDSQQRNHNLLSE-AKRIQQQLLNHPQTALSL- 1037 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 EQ+ L Q Q+ E G + QQL + +Q QQ L+ I Q E+W Sbjct: 1038 ---EQLLDALGQLQQQFSEQQKQLGAVEQQLAANEALKQNQQQLLDAINQQRNHTEEWKV 1094 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 L+ LIGS +G KFR FAQGLT + +V AN+QL ++ RYLL + + L + V+D +Q Sbjct: 1095 LHQLIGSSDGKKFRNFAQGLTFNIMVAHANEQLKKMSDRYLLIADSEQPLMLNVMDNYQG 1154 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 +R ++ LSGGESF++SL+LAL LS++ SH+ ++DSLFLDEGFGTLD E LD ALD L Sbjct: 1155 GQIRTSKNLSGGESFIISLSLALGLSNMASHRMQVDSLFLDEGFGTLDEEALDVALDTLT 1214 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKV-------KKINGLGYSKL 1041 L SGK IGVISH++A+K+RI QI+V KI G G +K+ Sbjct: 1215 NLQQSGKLIGVISHIQALKDRISSQIQVVPQTGGISKIIGAGITKI 1260 >UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLX9_9BACT Length = 1194 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 223/749 (29%), Positives = 363/749 (48%), Gaps = 117/749 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L LR KNLNSL+G W IDF + + + LFAI GPTG+GK+T+LDA+CLALY TPR Sbjct: 1 MRLLRLRFKNLNSLEGRWSIDFRDQRYLDDCLFAIVGPTGSGKSTVLDALCLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS V+ S+N++M+R T EC A+VEFE GE+YR WSQ+R+R P G LQ P L+R + Sbjct: 61 LSRVTGSENEIMSRKTGECFAQVEFEAGGESYRCTWSQHRSRKSPSGKLQQPTHLLSR-S 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G++L + + LTGLD+ RFTRS+LL+QG FAAFL+A P +RA LLE +TGTE Sbjct: 120 NGEVLESALSKTSSAVSDLTGLDFDRFTRSVLLAQGGFAAFLDASPGDRAPLLERITGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP--EQVQSLTASLQVLTDEEKQLITA 238 I+ +IS V E+ + L+ L+ + + P E+V+ L++ D E+ I++ Sbjct: 180 IFSRISIAVHERKRKEEEVLKDLKNRLASEVEDGPSGEEVKRDLDGLEI--DIER--ISS 235 Query: 239 QQQEQQS-LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL---------AALSLAQP 288 +E +S + L ++ L+ E + L A EEE+ ++ +A +LA P Sbjct: 236 DLKEMESRIGSLRERERLESEI--KNIELLIADLEEERLSRKIDLGRLERYRSAQTLAAP 293 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIE----EVNTRLQSTMALRASIRHHAA--------- 335 L ER+AE ++L I + IE EV R + + L + IR Sbjct: 294 YERLSSIRERLAELDSSLLEIDRSIESAFSEVRARKEESERLSSDIREMEIERERFIPIW 353 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQ-----------------------------WN---N 363 +++ ++ SL + L E +R R W+ Sbjct: 354 RKAKDMDSHIGSLRSSLSERERARDDERKGLSKIEERILDVEKELEALEKSKKLWSLRME 413 Query: 364 EPAGWRAQFSQQTSDREHLRQWQ---QQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 GW + + + E LR+++ +L E +L L+ + ++D + L E Sbjct: 414 RMEGWDSLIPRLSDIEERLRRFRVLSSELESLEGRLPRLSKEVVERSSDLDRSRL----E 469 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQL----QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 L + +L V Q RL +L +A + +R+ +L E R E +Q Sbjct: 470 LEGLTDEVESLEKSKVRQDSRLKRLLSGRPIAEWRAMEAFFRRSISLFEGESRSVELEKQ 529 Query: 477 L-----------ADVKTICEQ-----------------EARIKTLEAQRAQLQAGQPCPL 508 + AD+ + E+ AR ++E QR L G PCPL Sbjct: 530 IVTLRTDLRKKEADLMVLAEKAGLLDSLVESLDKRREDRARTLSMEVQRGSLVDGCPCPL 589 Query: 509 CGSTSHPAVEAYQALEPGVNQ---SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CG+ HP + G+++ SR + E+ +L +E L ++ + QL+ E Sbjct: 590 CGALHHPYSSKVPGFDDGLDEEWRSR----KAELSRLRDEKIRLETTVETSSDQLKGMEL 645 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ----RHEL 621 E L + ++ + SL++++ P D+ + L+ + E++L+LL + R E Sbjct: 646 ERSELLRSIESERSALMSSAKSLSLSI-PSDEGKSLLEKR-RLEKRLKLLDRISEIRDEK 703 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 +G++ I + ++ + R +L L+ L Sbjct: 704 RGRLENLRSSIGEKERAV-HRIELSLSEL 731 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 165/295 (55%), Gaps = 8/295 (2%) Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 L A+ F + + + F+A+ D+ + +L ++ N++ A+T + Sbjct: 899 LASAEVAFGELCRKAGLSGEPDFVASFRDQDDMEELSLWMEDWRNRKNTAETNLADRKSR 958 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 A + +D ++ E ++ E KL E +G + +L + + + + L Sbjct: 959 KASIGEFDGEDLRSVEAKAEALRSE---RDLKLAE----KGRLNAELDRIEEMEKSRSEL 1011 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR 926 ++ + VE W L+ LIGS +G +FR FAQG+ L+ LAN +L R+ RY+L Sbjct: 1012 KSRLKEQVSNVELWRGLHGLIGSADGKRFRSFAQGIAFKTLISLANGELRRMTDRYVLLP 1071 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGF 986 K E +E+ V D +QA +R TR LSGGE FLVSL+LAL LSD+ S K R+DSLFLDEGF Sbjct: 1072 KEDEPMELLVKDFYQAGEIRSTRNLSGGERFLVSLSLALGLSDMSSRKVRVDSLFLDEGF 1131 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 GTLD LD AL+AL L GK IGVISHV A++ERI +I+V+ G G S+L Sbjct: 1132 GTLDEAALDQALEALSELRRGGKLIGVISHVSAIRERIGARIRVEPSGG-GRSRL 1185 >UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHR0_DESAA Length = 1223 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 131/302 (43%), Positives = 196/302 (64%), Gaps = 6/302 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR KNLNSL GEW+IDF + S+G+F I+GPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MRILRLRFKNLNSLPGEWEIDFNSVDYTSSGIFTISGPTGSGKTTVLDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MTR T EC +EVEF Y WSQ RARN+PDGNLQ + ELA Sbjct: 61 LPSITGSSNEIMTRHTGECFSEVEFSANSGHYLCHWSQRRARNKPDGNLQGYKHELAYAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ +K TG+++ RFTRS++L+QG FAAFL K ER+ LLE++TGT+ Sbjct: 121 SGEIIENKPSKTASCVEEATGMNFKRFTRSVMLAQGNFAAFLKEKSDERSGLLEQITGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ ++ ++L+ + + L +PE++Q L + +++ +E + ++AQ Sbjct: 181 IYTTISIAVHERKRAENETKDRLEERLGEIRLRSPEEIQELKNT-RIIKQKEVEAVSAQA 239 Query: 241 QE-QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ--PQLAALSLAQPARNLRPHWE 297 +E Q+ ++WL D+L + +Q QQA +E++AQ P L L + A +L ++ Sbjct: 240 KEVQEKISWLENLDKLSKGLENLKQ--QQAAFDEKQAQARPDLDRLKTGRQAHDLEADYD 297 Query: 298 RI 299 ++ Sbjct: 298 KL 299 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 194/322 (60%), Gaps = 22/322 (6%) Query: 725 QCLALHSQQQTLQQQDVL---------AAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 +C L S++Q+L+ D L A L+KA A F L AS FDD++A+ AAL+ Sbjct: 898 KCAELESEKQSLE--DRLKELAKSLEEGANKLEKAGAAFQANLSASGFDDEKAYAAALLP 955 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT---VEQIQQEL 832 ++ L +LE LK+ L ++ + TL+ Q +TL + + +L T +E + E Sbjct: 956 KEELKRLEDLKKGLNQEKIRLATLMEQQTKTLQEEK--------SLNKTNRDMESLTGEN 1007 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 A+ K + G I Q+L ++Q+ L+ I +++ WG L+ LIGS +G Sbjct: 1008 AELSDKAKAVQEKIGAIAQELSAHEKLAEKQKGLLNDIEAQSKECGKWGRLHDLIGSNDG 1067 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLS 952 KFR FAQGLT + +V AN+ L + RYLL R +E L++ V+D +QA VR T+ LS Sbjct: 1068 KKFRNFAQGLTFEIMVSHANKHLQTMSDRYLLIRDPNEPLDLNVIDNYQAGEVRSTQNLS 1127 Query: 953 GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 GGESF+VSLALAL LS + S R+DSLFLDEGFGTLD ETLDTAL AL L GK IG Sbjct: 1128 GGESFIVSLALALGLSGMASRNIRVDSLFLDEGFGTLDDETLDTALSALSNLKQDGKLIG 1187 Query: 1013 VISHVEAMKERIPVQIKVKKIN 1034 VISHV+A+K+ IP QI+V+ N Sbjct: 1188 VISHVQALKDCIPCQIQVEPDN 1209 >UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S800_PROA2 Length = 1226 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 123/296 (41%), Positives = 190/296 (64%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL+G W IDFT P+AS+G+F ITGPTGAGK+T+LDA+C+ALY +TPR Sbjct: 1 MKILQLCFRNLNSLQGTWSIDFTAPPYASDGIFLITGPTGAGKSTILDAVCIALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M+R + +C AEV FE +R WSQ+R+R QPDG LQ PR E++ Sbjct: 61 LGRLTKSSNEIMSRMSGDCFAEVTFETDAGMFRCHWSQHRSRRQPDGELQNPRHEISDVH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GK++ K++D L TG+D+ RFTRSMLL+QG FA FL + +RA +LE++TGTE Sbjct: 121 TGKVIESKMRDVLLAIEERTGMDFDRFTRSMLLAQGSFAVFLQSDADKRAPVLEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + + L+ + + + ++ + +L + EKQL+ + Sbjct: 181 IYSEISRRVHERSREEKNHLQLKRIELETIDMMGESERCALEEQINEDRRSEKQLLERLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 +EQQ+L WL + +L +E ++ ++ + E+ +P L L+ A+ A ++ + Sbjct: 241 KEQQALQWLHQLRDLNEERVSIERESRELVVRRERFEPSLQRLNRAEKASHIEGMY 296 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 120/314 (38%), Positives = 181/314 (57%), Gaps = 14/314 (4%) Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM---DEQTLTQLEQLKQNLE 790 QTL + Q L QF ++L S F D+ F A + D ++L LE+ K N + Sbjct: 915 QTLDVSMLKRHQRLAAMSEQFRSSLHRSGFHDENDFSNARLTQEDRESLL-LEEKKLNTD 973 Query: 791 NQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT-VEQIQQELAQTHQKLRENTTSQGEI 849 A L ++A + +H+ + LT + +E+++ +A +++RE G + Sbjct: 974 -----ASLLDLRSAACVKKHETLVSKN---LTSSGIEEVEHSMADIEEEIRERGKRLGAL 1025 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 Q+L+ D R +Q+ QIA + + W + LIGS +G K+R F Q LT + ++ Sbjct: 1026 EQRLQDDDMARSRQKEKADQIASLVEGCRLWEQMYELIGSADGKKYRNFVQSLTFEMVIV 1085 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 AN+QL ++ RY L L++ VVD +Q VR TR LSGGESF+VSLALAL LS Sbjct: 1086 HANRQLIKMTDRYFLVPDRKNPLDLNVVDNYQGGEVRSTRNLSGGESFIVSLALALGLSS 1145 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 + S K R+DSLFLDEGFGTLD ++L+TAL+AL L +GK IG+ISHV +++R+ Q+ Sbjct: 1146 MSSRKVRVDSLFLDEGFGTLDEDSLETALEALSGLQQTGKLIGIISHVAVLRDRLTTQVF 1205 Query: 1030 VKKINGLGYSKLES 1043 V+ ++G G S L+ Sbjct: 1206 VRPLSG-GKSSLDG 1218 >UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5B9 Length = 1191 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 143/364 (39%), Positives = 218/364 (59%), Gaps = 7/364 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L+NLNS++ +WKIDFT + FA NGLFAITGPTGAGKTT+LDAICLALYH TPR Sbjct: 1 MKILSVLLENLNSIEQKWKIDFTADEFADNGLFAITGPTGAGKTTILDAICLALYHTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +Q+ +M R+ C AEVEF V + Y A WS +RAR + DG +Q + L Sbjct: 61 TGSGTQNGEMVMNRNAGFCSAEVEFSVNDKVYLATWSVSRARKKTDGKIQPAKASLTNLT 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D +A ++ DKL+ LT L++ +FT+SMLLSQG FAAFL+AK ER++LL+++TGTE Sbjct: 121 DNIEMATQIGDKLKQVIHLTKLEFSQFTKSMLLSQGAFAAFLDAKDNERSDLLQQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS FE+ K + L++L + S +L+ ++ S+ S L + QL T Sbjct: 181 IYTEISKRAFEEAKQLESLLKQLHMKHSAQPVLSDDEEASIAESANELLIQTTQLQTQIN 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +WLT+ D L Q + + A + A++ E+ + LA L L A++ P + ++ Sbjct: 241 NLVEHRDWLTQLDVLTQHVTGAKAAHEHAVSALEQEKTNLAMLELGLLAQSFAPLYAKMQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + ++ ++ ++ ++ T+L + + L+ Q +LNT + H+ +Q Sbjct: 301 DLEIRVSTLQDELSQLKTQL-------PDLAQTLDDANTALKTAQDALNTQTKAHNALQQ 353 Query: 361 WNNE 364 NE Sbjct: 354 LINE 357 Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 206/616 (33%), Positives = 304/616 (49%), Gaps = 81/616 (13%) Query: 499 QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITK 558 QL + CPLC + E+Y A + +N + +K+ E A+TK Sbjct: 584 QLHHKETCPLCAGSEFGDYESYHAHQTQLNDDGAFS-----QKIAEYLHQFEQSEQAVTK 638 Query: 559 QLQR----DENEAQSLRQDEQ---ALT---QQWQAVTASLNITLQPLDD--IQPWL-DAQ 605 + Q + + A +L Q +Q LT ++W T L++TL D I +L + + Sbjct: 639 KQQAIAKIEAHLASALAQIDQLQLTLTTNQERWDTATKQLSVTLSITDHEAIMRYLQECE 698 Query: 606 DEHE--RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE 663 D + QL L+ R L ++ + Q+ Q + GYA P+ D E Sbjct: 699 DFRDGITQLSTLNSRAALFNELTTAQSTWNDAKAQLSQA-----IVIAGYAAA-PEIDIE 752 Query: 664 E------SWLATRQQEAQSWQQRQNELT----------------------------ALQN 689 SWLA +Q +A +WQ +++ T +L + Sbjct: 753 YEDSLFLSWLAQKQADATAWQDQKSAFTTQEKALTRLHADIQIQTNQKVTSDEALESLYD 812 Query: 690 RIQQLTPILETLPQ------SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ---- 739 + QL L++ Q +D++PH E Q L +QQQ Q Sbjct: 813 QQTQLNITLQSAKQKRFALFADKIPHTELATAQAALTAAQTQVGTLSTQQQLAHTQHETT 872 Query: 740 --------DVLAAQSLQKAQA--QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 LA + + A F+ AL AS F D AF AAL+ ++ + L LKQ L Sbjct: 873 LSKIEQLTTTLAKERVNHTNAINAFNDALNASTFADVDAFTAALLTDEQVQSLNILKQEL 932 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + ++L TL H + P + T E++ +++ +L+ + ++ Sbjct: 933 NDAIVSTRSLFVSQQATLETHISY-PLANMYQQTTKEEVIEQIVPLESQLKTLNDDRAKL 991 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 +L+++ +QQQ + QI + +++ YL+ LIGS +G +FR FAQGLTLD+L+ Sbjct: 992 AGKLEENERFKQQQAQVQGQIDWLNEKLTLANYLSGLIGSADGKRFRNFAQGLTLDHLIT 1051 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 LAN +T RY LQRK E+LE+ VVD WQAD +RDT+TLSGGE+FLVSLALAL LSD Sbjct: 1052 LANHHMTAFDNRYALQRKDDESLELLVVDQWQADNLRDTKTLSGGETFLVSLALALGLSD 1111 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 LVS + IDSLFLDEGFGTLD TLD A++AL+ L + GK IGVISHV+ M+ERI +Q+K Sbjct: 1112 LVSKRISIDSLFLDEGFGTLDENTLDLAMNALEQLQSQGKMIGVISHVKEMQERIHLQVK 1171 Query: 1030 VKKINGLGYSKLESTF 1045 V K G G S L+ + Sbjct: 1172 VSKSAGTGTSSLDPKY 1187 >UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW76_SYNWW Length = 1223 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 130/277 (46%), Positives = 178/277 (64%), Gaps = 10/277 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI +R +NLNSL GEW IDF+ + S+G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MKIKQIRFQNLNSLVGEWIIDFSHPAYLSDGIFAITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T C AE+ FE + YR WSQ RAR P G LQ R E+A Sbjct: 61 LERVNKSSNEIMSRHTGSCYAEISFETREGYYRCHWSQQRARKNPQGELQPHRHEIADAH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K++D +TG+++ RFTRS++L+QG FAAFL A ERA +LE++TGTE Sbjct: 121 SGQILENKIRDVAARVERITGMNFTRFTRSIMLAQGGFAAFLQAPADERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L+ LQA+ SG+ LLT E+ ++L +Q K+ + Sbjct: 181 IYSEISRKVHERQREENDRLKILQAEISGIKLLTTEEEEALRQDMQAKIARGKERQEELK 240 Query: 241 QEQQSLNWLTR----QDELQ------QEASRRQQALQ 267 Q L+WL R ++E++ Q+ +RQQA Q Sbjct: 241 GLQLVLDWLDRMVGWENEIKDIEEQWQQYLKRQQAFQ 277 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 126/328 (38%), Positives = 189/328 (57%), Gaps = 7/328 (2%) Query: 705 DELPHCEETV--VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 +E+ EE V E+ +++ L L +++TL A LQ ++ F LQ + Sbjct: 883 EEIGLAEELVNRTYEDMQELQRHQLRLEEREKTLAVTVQNRAPELQSSEESFTRQLQQAG 942 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F+ ++ + A + + L Q + L + + QT + E L Q ++ + G A Sbjct: 943 FEQEEDYRQARLSLEEQQALAQKAEALTKEATELQTRLKDRQEKL-QREKEQKLSGEARE 1001 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 V +E+ Q+ Q LRE G R+ L+ +R++ QT +Q++ + ++++ W Sbjct: 1002 V-LEEKQRLGEQELIDLREEI---GAARRTLEDSEQSRRRMQTQLQRVEEQKKELQRWQL 1057 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 L+ LIGS +G K+R FAQGL+ D ++ AN+QL ++ RY+L R + LE+ ++D +QA Sbjct: 1058 LHDLIGSADGKKYRNFAQGLSFDIMIKHANRQLHKMSDRYILLRSQEQPLELNIIDNYQA 1117 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 +R T LSGGESFLVSLALAL LS + S K +DSLFLDEGFG LD + LDTAL+ L Sbjct: 1118 GEIRSTANLSGGESFLVSLALALGLSQMASRKVSVDSLFLDEGFGALDEDVLDTALNTLA 1177 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKV 1030 L GK IGVISHV A+KERI QI+V Sbjct: 1178 GLQQDGKLIGVISHVPALKERISTQIEV 1205 >UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYK7_9DELT Length = 1087 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 133/271 (49%), Positives = 177/271 (65%), Gaps = 3/271 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LRLKNLNSL GEW+ID T +AS+G+FAITGPTGAGK+T+LDA+CLALY TPR Sbjct: 1 MQIRQLRLKNLNSLVGEWEIDLTHPDYASSGIFAITGPTGAGKSTILDALCLALYGTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q+ N++M+R T EC AE F YR WSQ+RAR +PDG LQ P+ ELA Sbjct: 61 LGKITQADNEIMSRQTGECFAEATFVTAAGRYRCHWSQHRARRKPDGKLQAPKHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ K + E T+TG+D+ RFTRSMLL+QG FAAFL A P +RA +LE++TGT Sbjct: 121 SGRIMESKQRGVAEQIETVTGMDFDRFTRSMLLAQGGFAAFLQADPDQRAPILEQITGTG 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V ++ + + +LE L+ Q +G+ LL E+ + L L + EK+L Sbjct: 181 IYSLISIKVHQRRGAEQRQLENLERQLTGIRLLPQEEEEQLQKELTAGQEREKELAEQIG 240 Query: 241 QEQQSLNWLTRQDELQQE---ASRRQQALQQ 268 +++ WL L QE SRRQ+ LQQ Sbjct: 241 VGNRAIGWLDNLARLAQELAQNSRRQEELQQ 271 >UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WT34_9DELT Length = 1230 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 117/235 (49%), Positives = 161/235 (68%), Gaps = 1/235 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I ++R +NLNSL G W+ID TR F S G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MRIQNIRFQNLNSLTGVWEIDLTRPDFVSAGIFAITGPTGAGKTTILDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L +S S+N++M+R T EC+AEV F++ G YR WSQ RAR P+G LQ R E+A Sbjct: 61 LKTLSDSENEIMSRQTGECMAEVVFQIASGRRYRCHWSQRRARKSPEGRLQAARHEIADA 120 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 G+I+ + +D + +TGLD+ RFTRSM+L+QG F+AFL+A RA +LE +TGT Sbjct: 121 DSGQIICAQKRDMARVVTEITGLDFDRFTRSMMLAQGGFSAFLDASADSRAPILESITGT 180 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 E Y +IS +V E+H+ + LE ++ + +G LL ++ Q+L L L D+ +Q Sbjct: 181 EKYSRISMLVHERHRQEKLLLEDMRKELAGKPLLPVDEEQALRQQLSRLEDQSRQ 235 Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 206/663 (31%), Positives = 312/663 (47%), Gaps = 139/663 (20%) Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSH-------PAVEAYQALE----------------- 524 RI +LE RA L+ G CPLCGS H PA + +Q +E Sbjct: 584 RIASLEQHRASLEEGHACPLCGSLEHPYLLQGLPASDNWQQVEDVRRRFAMTDQQCAALR 643 Query: 525 ---PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR----------DENEAQSLR 571 G+ Q+ L+ +EN + L ++ L+G + + + ++ E+ A +R Sbjct: 644 ERLTGLEQNLLVGMEN-ARSLQDK---LQGSQEYLAQLAEKAGLPSLLREPPESAATFVR 699 Query: 572 QDEQALT----QQWQAVTAS--LNITLQPLDDIQPWLDAQDEHERQLRLLSQ-----RHE 620 + ++ LT Q +Q ++A+ L T + L+ P + Q +L Q +HE Sbjct: 700 EQQERLTELLRQLYQRISAAGKLEETCRMLESNVPRMQEQKT------MLDQAVEQFKHE 753 Query: 621 LQGQIAAH---NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED--EEESWLATRQQEAQ 675 L A Q++ Q +Q+ EQ +Q L T L Y L + + S L TR+ E Sbjct: 754 LALATAEQQRMRQELAQLRQEGEQGRQALDTMLAAYGLGIAGGELLHISSALKTRRTE-- 811 Query: 676 SWQQRQNELTALQNRIQQLTPILETLPQ--SDELPHCE----ETVVLEN-WRQVHEQCLA 728 W+++ L+ L Q+L Q + H E E E W+++HEQ LA Sbjct: 812 -WERQTAALSRLAASRQELELAASQHDQEVKSQQAHLESQQREAREREGQWKKLHEQRLA 870 Query: 729 LHSQQQT--------------------------------------LQQQDVL----AAQS 746 L +++ ++++D L A Q+ Sbjct: 871 LFAEKDVQEVEADLAQAVTRDEQRLADQTAAVSRMSDVVTMTESAIREKDALLASIAEQT 930 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ--------AQT 798 + QA F LQ F D+++FL A + + LE+L Q L R + + Sbjct: 931 VHAGQA-FAQGLQQEAFTDERSFLQACLPAEEREGLERLSQELHEVRMELAGRSRAAREH 989 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 L T+TA+ L T E++ QELA + QG Q+L + Sbjct: 990 LATETAKALT-------------TKNREELGQELATLEHQQAALQQEQGSCLQRLADNER 1036 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 RQ+Q+ L+++I Q + E W L LIGS +G KFR Q + L+ +V AN+QL ++ Sbjct: 1037 VRQEQRLLVERIEQQERVFEQWSALQELIGSADGKKFRNIVQQMNLELMVAHANRQLVKM 1096 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRID 978 RY+L+ + LE+ + D +QA +R T+ LSGGESFLVSLALAL LS + S TR+D Sbjct: 1097 TDRYVLE-VGNGPLELNIHDNYQAGELRSTKNLSGGESFLVSLALALGLSQMASRTTRVD 1155 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 SLFLDEGFGTLD + LDTAL L +L GK IG+ISHV+ +KER+P QI+V + G G Sbjct: 1156 SLFLDEGFGTLDEDALDTALSTLASLQQRGKLIGIISHVQGLKERVPTQIEVLPVGG-GR 1214 Query: 1039 SKL 1041 S++ Sbjct: 1215 SRI 1217 >UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=A5WEF8_PSYWF Length = 1346 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 129/265 (48%), Positives = 175/265 (66%), Gaps = 14/265 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW+IDF+ E + + G+FAI G TGAGKTT+LDAICLALY ETPR Sbjct: 1 MRLIELRLKNLNSLKGEWRIDFSDEAYINEGIFAIIGHTGAGKTTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +SN+S+S N++MTR T ECLAEV ++ G YR W Q RA +PDGNLQ EL+ + Sbjct: 61 ISNISKSTNEVMTRQTGECLAEVVIDINGTHYRCHWYQRRAHGKPDGNLQDATHELSLAS 120 Query: 121 D------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D G +L +K + LT +D+ +FTRS+LL+QG FAAFL+AK ERA++LE Sbjct: 121 DHEGQKAGTVLEEKSSLTKKRIVELTRMDFQQFTRSILLAQGSFAAFLSAKADERADILE 180 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ----VQSLTASLQVLTD 230 ++TGT+IY IS V E+ + L LQ + G+ LL E Q L A+ + LTD Sbjct: 181 KITGTDIYATISERVHEKKRQEEALLNTLQTKLQGLELLDVEAETQLKQQLEANTKQLTD 240 Query: 231 EEKQLITAQQQEQQSLNWLTRQDEL 255 + I +Q ++Q L W+T ++L Sbjct: 241 H--RAIVSQLEDQ--LTWITEVEQL 261 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 123/288 (42%), Positives = 174/288 (60%), Gaps = 6/288 (2%) Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 T L A FD + +LAA + ++ L Q +Q + N AQ + +T E QH+ Sbjct: 1055 LSTQLVAHDFDSEADYLAARLPKEQRDALNQRQQEIVNALNYAQNAL-KTVEHQLQHKTA 1113 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 P T T E +Q + Q + E G I QQL+ + + Q++ +++IA+ Sbjct: 1114 NPQ----TTDTKENLQAQRQQQQDLVDELIEQVGGINQQLQTNEARKTDQRSQLEKIAEQ 1169 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 Q+++ W L LIGS +G K+R FAQGLT + +V AN QL ++ RY+L R + LE Sbjct: 1170 KQKLKVWQELYGLIGSADGKKYRTFAQGLTFEIMVSNANTQLRKMSDRYILVRDENSPLE 1229 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 + V+D +Q +R T+ LSGGE FL+SLALAL LS + S R+DSLFLDEGFGTLD ++ Sbjct: 1230 LNVIDDYQGGLIRSTKNLSGGEGFLISLALALGLSSMASQNIRVDSLFLDEGFGTLDEDS 1289 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD AL+ L L GK IG+ISHV+A+K+RI QI+V K++G GYSKL Sbjct: 1290 LDVALNTLTNLQQEGKLIGIISHVQALKDRIHTQIRVDKLSG-GYSKL 1336 >UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FM95_METHJ Length = 1219 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 111/221 (50%), Positives = 158/221 (71%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L+ NLNSL G+W IDF+ F S+G+F ITGPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MKILQLKFSNLNSLAGDWTIDFSNPAFTSSGIFLITGPTGSGKTTVLDAICLALYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+++ N +MTR T EC AEV FE + + W+Q RA+N+PDG LQ P+ E++R Sbjct: 61 LGKVTKTNNHIMTRHTGECSAEVVFESQKGRFVCHWNQRRAKNKPDGELQPPQHEISRAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +ILA K+ E+ +TG+DY +FTRS+LL+QG FAAFL A ERA +LE++TGT Sbjct: 121 TKEILASKINQVQEIVKEVTGMDYDQFTRSILLAQGGFAAFLQAGADERAPILEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 IY ++S +E++ S R +LE++ + +++L+PE+ +S+ Sbjct: 181 IYSKLSEKTYERYTSEREKLEQVTRECDLISILSPEEKESI 221 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 176/299 (58%), Gaps = 23/299 (7%) Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL--ENQRRQAQTLV 800 A Q + + +F + ++ + F D++A+ +ALM ++ + +LE++ +++ E R + + + Sbjct: 921 AQQDISSSLDEFLSHIRQAGFQDEEAYTSALMKQEEMVRLEKVWEDIRTEETRIRERKIS 980 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQ-------ELAQTHQKLRENTTSQGEIRQQL 853 +T Q + L L +E++Q+ ++ + +KL + Sbjct: 981 AETRYVEEQKKNLTTKPALDLKADLEELQKQKDLYIADIGKNQEKL-------------I 1027 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQ 913 + + RQQ++ + + A+ ++V W LN LIGS +G KFR FAQGLT L+ ANQ Sbjct: 1028 RHEEMVRQQREKIAIRDARQ-REVNKWHRLNELIGSADGKKFRVFAQGLTFCILLSHANQ 1086 Query: 914 QLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH 973 L R+ RY+L + L+++V+DTWQ VR + LSGGE F+VSLALAL LS + S Sbjct: 1087 HLQRMTDRYILIQDKDLPLDMQVIDTWQGGVVRSVKNLSGGEIFMVSLALALGLSHMASQ 1146 Query: 974 KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 R+DSLFLDEGFGTLD + L+TAL L L GK IGVISHV A+KERIPV+I ++K Sbjct: 1147 NVRVDSLFLDEGFGTLDDDALETALSTLSGLEQEGKLIGVISHVSALKERIPVRISIEK 1205 >UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QNJ6_CHLP8 Length = 1226 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 118/250 (47%), Positives = 171/250 (68%), Gaps = 2/250 (0%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR NLNSL+GEW+IDFTR + ++G+FAITGPTG+GK+T+LDAICLALY ETPR Sbjct: 1 MKILTLRFANLNSLQGEWQIDFTRPEYVADGVFAITGPTGSGKSTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ S N++M+R EC AEV F +R WSQ+R+R +P G LQ + E+A A Sbjct: 61 LGKITVSSNEIMSRHAGECFAEVTFAAASGTFRCTWSQHRSRKKPGGALQAQKHEIADAA 120 Query: 121 DGKILADKVKD-KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 G I+ +V++ +LE+ A TG+D+ RFTRSMLL+QG FA FL A +RA +LE++TGT Sbjct: 121 TGAIIQSRVQETRLEVEAR-TGMDFDRFTRSMLLAQGDFAKFLQADADQRAPVLEQITGT 179 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 EIY IS V E+ ++ L++L+ + G+ LL E++ +L A ++E ++ + Sbjct: 180 EIYSLISMKVHERKRAELERLQRLEIEVGGIRLLGAEELAALEAERSEALEQEAKMSASL 239 Query: 240 QQEQQSLNWL 249 + + +L WL Sbjct: 240 ESDSAALRWL 249 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 121/323 (37%), Positives = 175/323 (54%), Gaps = 24/323 (7%) Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD-------EQTLT 780 A+ Q LQ++ ++ L++ + F L+ F + FL A + EQ Sbjct: 910 AIAGLHQALQERRLV----LERREEAFTLELKQKGFIGEAVFLEARLPIGERQKLEQKAD 965 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 L + LE +R++ QT + + E + + E++ + +A+ ++LR Sbjct: 966 SLNKRAHELEARRKERQTKLHEVRERQLTSESN------------EKLSERIARRQEQLR 1013 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 E G I QL+++ + + + + + W L+ LIGS +G KFR FAQ Sbjct: 1014 EVRGRIGAIANQLRENEQAAGEHRIKLHAVEAQKSEYRRWELLHDLIGSVDGKKFRNFAQ 1073 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 G+T + ++ AN+QL ++ RY L + LE+ V+D WQA VR TR LSGGESF+VS Sbjct: 1074 GITFELMISHANRQLRQMTDRYQLLHDPNNPLELSVIDQWQAGEVRSTRNLSGGESFIVS 1133 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALAL LS + S R+DSLFLDEGFGTLD E L+TALD L L SGK IGVISHV A+ Sbjct: 1134 LALALGLSQMSSRNVRVDSLFLDEGFGTLDEEALETALDTLAGLQQSGKLIGVISHVAAL 1193 Query: 1021 KERIPVQIKVKKINGLGYSKLES 1043 +ERI I+V G G S +E Sbjct: 1194 RERISTHIRVAPKTG-GRSSIEG 1215 >UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum RepID=Q8KDA7_CHLTE Length = 1222 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 112/249 (44%), Positives = 162/249 (65%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I LR NLNSL+GEW+IDFTR + S+GLFAITGPTG+GK+T+LDAICL LY +TPR Sbjct: 1 MIIQKLRFANLNSLQGEWEIDFTRPEYLSDGLFAITGPTGSGKSTILDAICLGLYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M R + +C AEV F AYR WSQ+R+R++ G LQ + E++ Sbjct: 61 LGRITKSSNEIMARHSGDCFAEVTFATASGAYRCHWSQHRSRHKRGGELQSQKHEISDAV 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ++ K+++ L+ TG+D+ RFTRSMLL+QG F AFL A +RA +LE++TGT+ Sbjct: 121 TGALIQTKLQETLQEVEARTGMDFDRFTRSMLLAQGAFTAFLQADADQRAPVLEQITGTK 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ + LE+LQ + G+ LL E+ ++L ++E++L + Sbjct: 181 IYSVISMKVHERRRDELARLERLQLECEGIRLLGDEERRALETERAECIEKERELNAGVE 240 Query: 241 QEQQSLNWL 249 E + WL Sbjct: 241 TESAAQRWL 249 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 117/290 (40%), Positives = 164/290 (56%), Gaps = 6/290 (2%) Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 F AL F D+ AF+AA + E +LE +LE+++R + L + Sbjct: 932 FGAALAGKGFADEAAFVAACLPEAERERLESAATSLEHRKRDLDLKRSDREARLRDELER 991 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 R T++ +++ + + +LR+ G I +L+ + ++ M + Sbjct: 992 R-----LTTLSADELAVRIGELQAQLRDVQGRVGAIASRLEAHRQAADEHRSKMAAVEAQ 1046 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + W L+SLIGS +G KFR FAQG+T + ++ AN+QL R+ RY+L S ALE Sbjct: 1047 KAECRRWEMLHSLIGSADGKKFRNFAQGITFEIMIAHANKQLMRMTDRYVLLHDLSGALE 1106 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 + V+D WQA VR TR LSGGESF+VSLALAL LS + S +DSLFLDEGFGTLD E Sbjct: 1107 LSVIDQWQAGEVRSTRNLSGGESFIVSLALALGLSQMSSRNVSVDSLFLDEGFGTLDEEA 1166 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L+TAL L L SGK IG+ISHV A+++RI IKV + G G S +E Sbjct: 1167 LETALKTLGTLQQSGKLIGIISHVPALRDRIATHIKVTPLTG-GRSAIEG 1215 >UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Psychrobacter RepID=Q4FSU3_PSYA2 Length = 1307 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 128/329 (38%), Positives = 193/329 (58%), Gaps = 15/329 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW IDF+ F + G+FAITG TGAGKTT+LDAICLALY +TPR Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MT+ T EC AEV E+ + Y+ W Q+RA + GNL + E++ Sbjct: 61 LGDITGSTNEIMTQGTGECSAEVIIEIDAKRYQCSWYQHRAHKKAKGNLLPIKHEISEVK 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL +K L G+D+ +FTRS++L+QG FAAFL + +RA +LE++TGT Sbjct: 121 SGKILEEKKSKTSAYIQALIGMDFSQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L KLQA G++LL+ E A L+ L ++ + Q+ Sbjct: 181 IYAKISLNVHEKKRFEEDVLSKLQAGVDGLSLLSIEDENLQAAELKALNQQQ----STQR 236 Query: 241 QEQQSLN----WLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 Q ++L+ WL +LQ S Q A ++ P+ LS+A A + + Sbjct: 237 QSFKTLSEQLQWLNNVQQLQNNLSIYQSEFATAQQAQQAFVPEAKRLSIANKALEIDSQF 296 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMA 325 L++ R+ +++++ QS ++ Sbjct: 297 RE-------LSYSRETVKKLDVEQQSLLS 318 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 193/333 (57%), Gaps = 46/333 (13%) Query: 731 SQQQTLQQQDVLAAQS----LQKAQAQFDTALQASVFDDQQAFLAALMDE---------- 776 +Q Q+ Q+Q + A QS L QA F L+A+ F D+ AF+ A + + Sbjct: 986 AQLQSRQRQILAALQSATTALNTQQAVFLEHLEAAQFMDEDAFIRARLPKEERDALHLRK 1045 Query: 777 --------QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 Q +QL+ +Q+LE A T +Q ET+A QH + + ++Q+ Sbjct: 1046 LAIDSALQQAKSQLDSTQQSLEQNLSLAMTNASQ--ETIAAQHQH-------IQMEIDQL 1096 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 Q++ QKL++N +G+ QL A N Q+++ ++ W L+ LIG Sbjct: 1097 SQQIGAIVQKLKDNENQKGQRAAQLT--AINVQKEK------------LKIWQQLHILIG 1142 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDT 948 S +G K+R FAQGLT + ++ AN QL ++ RYLL S LE+ V+D +Q +R T Sbjct: 1143 SADGKKYRTFAQGLTFEVMISHANSQLQKMSDRYLLIHDDSNPLELNVIDNYQGGDIRST 1202 Query: 949 RTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 + LSGGE F++SLALAL LS + SH R+DSLFLDEGFGTLD E+LD ALD L L G Sbjct: 1203 KNLSGGEGFIISLALALGLSQMASHNIRVDSLFLDEGFGTLDEESLDIALDTLTGLQQEG 1262 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 K IG+ISHV+A+K+RI QIKV+KI+G G+S++ Sbjct: 1263 KLIGIISHVQALKDRILTQIKVEKISG-GFSQI 1294 >UniRef50_D1Y744 Exonuclease SbcCD, C subunit (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y744_9BACT Length = 299 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 127/291 (43%), Positives = 173/291 (59%), Gaps = 3/291 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L KNLNSL GEW +DF F GLFAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MRLCRLHFKNLNSLAGEWNVDFESPEF-RGGLFAITGPTGAGKSTLLDAVCLALYGRTPR 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR-ARNQPDGNLQVPRVELARC 119 L V+ S N++MTR EC AE FE+ GE Y AFWSQ + AR Q P+ +R Sbjct: 60 LERVNNSGNEIMTRGERECFAEAVFEIGGERYSAFWSQKKSARKGAAREWQAPKCRFSRL 119 Query: 120 ADG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 G ++LAD V + + LD+ RFTR+++L QG FAAFL A +RA+LLEELTG Sbjct: 120 GHGEEVLADSVSSMAKKVEEVCRLDFERFTRTVMLPQGGFAAFLQADGADRAKLLEELTG 179 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 EIY QIS V+++ K R LE+L+A + L+ E + V EK+L Sbjct: 180 AEIYRQISREVYDRTKRERAALEQLRASQAEHAPLSDETRAAAQRRAAVSETREKELRAL 239 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 +++ +Q+L+W +R+D L + ++A + E+ PQ L+ A+ A Sbjct: 240 EKELRQALDWYSRRDGLAARRAEHERARDELNEEQAAFAPQAEKLARAERA 290 >UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6P2_9GAMM Length = 1203 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 118/268 (44%), Positives = 165/268 (61%) Query: 22 FTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLA 81 T F S+G+FAI GPTG+GKTT+LDAICLALY TPRL+ V++S+N++M R T C + Sbjct: 1 MTHPAFVSDGIFAIIGPTGSGKTTILDAICLALYGRTPRLNKVTKSENEIMARQTGACFS 60 Query: 82 EVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTG 141 EV FE + +R WSQ RAR +PDG LQ P+ E+A +IL K++ E +TG Sbjct: 61 EVLFETQAGRFRCHWSQRRARKKPDGELQTPKHEIADADSNQILDAKLRGVAEQIEMVTG 120 Query: 142 LDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELE 201 +D+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTEIY QIS V E+ R L+ Sbjct: 121 MDFDRFTRSMLLAQGGFAAFLQAVPDERAPILEQITGTEIYSQISMCVHERRSDERKTLD 180 Query: 202 KLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASR 261 + A+ +GV LL E+ Q L SL ++E L ++ ++ WL + + L+++ Sbjct: 181 LMMAELAGVQLLGDEEEQQLNVSLDHHNNQEVLLQQEITKKNLAMTWLEQLNSLEKDLGF 240 Query: 262 RQQALQQALAEEEKAQPQLAALSLAQPA 289 + L E +P+L L A+ A Sbjct: 241 IIEQQHDLLQRRELFKPELERLERAKQA 268 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/338 (38%), Positives = 193/338 (57%), Gaps = 16/338 (4%) Query: 716 LENWRQ---VHEQ-CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 +E RQ V EQ C L S +++++ + LQ+ F T L F D+ +++ Sbjct: 871 IEGLRQTLSVTEQECAKLKSAIESIEKTIFSRSLKLQEVALVFKTQLDKFNFADEASYIN 930 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A + E L Q LEN+ + +T A+ L +Q + + E + QE Sbjct: 931 ACLSEDERKNLMLNAQKLENEYTELETRRKDKADLLEIERQKK-----VTAQSPEFLVQE 985 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 + +L+E + G ++Q+L+ + R++QQ +Q I ++ W L++LIGS + Sbjct: 986 RSGLISRLKEIQQAIGAMQQKLEGNERLRKKQQERVQAINLQKRESLRWDTLHALIGSSD 1045 Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 G K+R FAQGLT + ++ AN+QL ++ RYLL R S+ LE+ VVD +QA +R T+ L Sbjct: 1046 GKKYRNFAQGLTFEMMIGHANRQLLKMTDRYLLIRDESQPLELNVVDNYQAGEIRSTKNL 1105 Query: 952 SGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 SGGESF+VSL+LAL LS + S R+DSLFLDEGFGTLD + LDTAL+ L L +GK I Sbjct: 1106 SGGESFIVSLSLALGLSHMASKNVRVDSLFLDEGFGTLDEDALDTALETLAGLQQAGKLI 1165 Query: 1012 GVISHVEAMKERIPVQIKVKK-------INGLGYSKLE 1042 GVISHV +KERI +I++ I+G G +L+ Sbjct: 1166 GVISHVPTLKERISTRIQISHQTGGRSLISGPGCRRLD 1203 >UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW11_DICNV Length = 988 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 111/241 (46%), Positives = 154/241 (63%), Gaps = 7/241 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I S+R NLN+LKG W+IDFT ++ +FAITG TGAGK+T+LDAICLALY +TPR Sbjct: 1 MRIESVRFHNLNALKGAWQIDFTA---MADDIFAITGATGAGKSTILDAICLALYGQTPR 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ N +M R AEC AEV F + G+ YR FW QNRA + DG LQ P+ ++ Sbjct: 58 LGKITTKDNQIMNRSRAECGAEVVFFIAGKRYRVFWRQNRAYGRRDGKLQEPQHYISDAE 117 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G I+ +K+ A +T LD+ RFTR++LL+QGQFA FL AK +ERA +LE++TGTE Sbjct: 118 TGVIIEEKLSRTAAKVAEITHLDFARFTRTVLLAQGQFATFLQAKGEERAPILEQITGTE 177 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V ++ + L + S ++L++ E++ A Q L D I AQQ Sbjct: 178 IYSEISIAVQKRFAREHDDFSVLADKMSRISLVSAEEIARWQAEEQQLMDS----ICAQQ 233 Query: 241 Q 241 + Sbjct: 234 K 234 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 110/303 (36%), Positives = 165/303 (54%), Gaps = 17/303 (5%) Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 A+ +F L A+ F+ + AF A + ++EQ L +++Q Q + + + + Sbjct: 692 AEQEFMQFLAANGFEHRAAFEALQAAARDFERVEQQMAQLTEEKKQQQWQLETLCDRVNK 751 Query: 810 HQQHRPD---DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 QQ PD D ++ I LA+ + L G +R + +Q + + + L Sbjct: 752 AQQGLPDTMKDAAVCQTHLQTITSALAKAQEDL-------GAVRARRRQQENEQAENAAL 804 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR 926 ++ + V+ W L LIGS +G KFR FAQ LT + ++ AN+ L ++ RY LQ Sbjct: 805 KERYQRQDAVVQRWQRLYDLIGSSDGKKFRNFAQSLTFEAMLLEANKVLAKMSDRYQLQA 864 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGF 986 + L + VVD WQ VR +R LSGGESF+VSLALAL L+ L + R+DSLFLDEGF Sbjct: 865 EMEPPLSLVVVDLWQGGEVRSSRNLSGGESFIVSLALALGLAALSGREARVDSLFLDEGF 924 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV-------KKINGLGYS 1039 TLD++ LD ALD L ++ SGK IG+ISH+ +KER+ I+V ++ G G Sbjct: 925 ATLDAQALDVALDTLASIQMSGKMIGIISHLPLLKERVSTHIQVIAAGNGISQLRGAGVG 984 Query: 1040 KLE 1042 K+E Sbjct: 985 KVE 987 >UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNB0_CHIPD Length = 1244 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 145/392 (36%), Positives = 209/392 (53%), Gaps = 40/392 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL+ +IDFT+EP + G+FAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MKILAIRFKNLASLEDTNEIDFTKEPLSKAGIFAITGPTGAGKSTLLDALCLALYARTPR 60 Query: 61 L---------------SNVSQSQNDLMTRD-TAECLAEVEFE-VKGEAYRAFWSQNRARN 103 + +SQ + RD TAE AEVEF V G Y+A W+ RARN Sbjct: 61 YLQAKETGIEIQDQGGNKISQGDVRGILRDGTAEGFAEVEFAGVDGNNYKARWAVKRARN 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + DGNLQ VEL + K + L + GL++ +FTRS+LL+QG F AFL Sbjct: 121 KIDGNLQADTVELFNLTTNGVFPGKKTETLREIERVVGLNFEQFTRSVLLAQGDFTAFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A +A LLE+LTGT IY +IS ++ + K A TEL L+ Q +G+ LT E+ +L A Sbjct: 181 ADKDAKASLLEKLTGTNIYSEISVGIYNKFKEADTELRNLKQQVAGIERLTEEERMALHA 240 Query: 224 SLQVLTDEEKQLITAQQ----QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 + L + I++QQ + +++W D L++ + QQA E A + Sbjct: 241 QQEELGAK----ISSQQITIAELGAAISWYQLLDTLEKNREQATDQYQQATLAMENAGER 296 Query: 280 LAALSLAQ-------PARNLRPHWERIAEHSAALAHIRQQI-------EEVNTRLQSTMA 325 + +L + P R H +++AE AL I +I ++ T L++ A Sbjct: 297 IRNFTLVEHVQAARGPVEARRSHEQQLAEKEKALQEIDARIMRTTEAQQQAATALETAHA 356 Query: 326 LRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + AAK ++ + ++ L+T E DR Sbjct: 357 AVLHAQQEAAKHQPDITRARE-LDTLTGEKDR 387 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/240 (43%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 L+ HQ+ R D ++E + + Q L + + + +L+QD +N+ + L Sbjct: 1012 LSNHQEKRVSDQ-----SLEALTASSNEAKQVLEDLGREKNNLAYRLRQDEENKLKIGDL 1066 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR 926 I T E+W LN LIGS +G KFR+ AQ TLD L+ AN L+ L RY L R Sbjct: 1067 QYTIDAKTAVHENWSKLNELIGSADGKKFRQIAQEYTLDMLLDHANMHLSMLTRRYKLLR 1126 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGF 986 L ++V+D D +R +LSGGESFLVSLALAL L+ L S K +++SLF+DEGF Sbjct: 1127 IPGN-LALQVLDKDMGDELRTVFSLSGGESFLVSLALALGLASLSSSKMKVESLFIDEGF 1185 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 G LD +TL+ A+DAL+ L+ G+ +GVISHV+ M ERIP QIKV ++ G SK+E T A Sbjct: 1186 GALDPDTLNIAMDALERLHNQGRKVGVISHVQEMTERIPTQIKVIRMAN-GKSKVEVTGA 1244 >UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroidales RepID=A6LCR2_PARD8 Length = 993 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 195/619 (31%), Positives = 309/619 (49%), Gaps = 66/619 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L++R +NL SL+GE+ IDFT EP AS G+FAI+GPTGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MRVLAIRGRNLASLEGEFSIDFTEEPLASAGIFAISGPTGAGKSTLLDAMCLALFSRTPR 60 Query: 61 ----------LSNVSQS---QND---LMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARN 103 L +V + Q+D L+ R TA AEV+F + G YRA WS +RAR Sbjct: 61 TELAKENNVRLRDVQEDVLPQSDPRFLLRRGTASGYAEVDFVALNGCRYRARWSVSRARE 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + G LQ R+ L GK KD L GL + +FTRS+LL+Q F+ FL Sbjct: 121 KESGRLQAARLTLYNIDAGKEEPGTNKDLQARIIELIGLTFDQFTRSVLLAQNDFSTFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A+ E+A LLE+LTGTE Y +IS +F ++ A+ E+L A+ + LL+ E+V++ Sbjct: 181 AEQGEKASLLEKLTGTEQYSEISRRIFAKNAEAKEAYEQLYARVQDIELLSEEEVEASQT 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQ---QEASRRQQA--LQQALAEEEKAQP 278 L L E +L A + E+QSL + E+Q +E R + A L++ALA E ++ Sbjct: 241 RLSALEVELARLEKA-RAERQSLREAVKAAEVQIASKEKQREENARFLERALASLETSRK 299 Query: 279 QL--AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAK 336 + + LA R E S L QQ +++ +L+S + R+ Sbjct: 300 EYEQGEVRLA-----------RTDEESKGLRLELQQARKLDVQLESALKARSEADERMKD 348 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 S Q+ ++ L + + + ++ WR ++ + E L L H + L Sbjct: 349 FSRRKQEAEEKLRKVEERQKKASEEWDKLTSWRERYRSKEGIAEQLSAL---LIHLDTCL 405 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 A A+ +D+ A+ Q ++ +R+ + + ++ QV I+ +E+ Sbjct: 406 TARRAVE---RSDKALLAIRQKIQRLEVRRQSLRREAETHAKE------QVKIE---EER 453 Query: 457 TQRNAALNEMRQRYKEKTQQLADV---KTICEQEARIKT--LEAQRAQLQAGQPCPLCGS 511 AL E+ +++ + + + EQ + T +++ R +L AG PCP+CGS Sbjct: 454 KSVALALQELEPEALDRSIETCRTERERLLLEQAQFVTTGDIKSLRDKLTAGTPCPVCGS 513 Query: 512 TSHPAV--EAYQAL--------EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 HP EA++ L E + RLL + + G++ A L+ + + KQL Sbjct: 514 LEHPFASHEAHERLLALADRISEATLRLKRLLDRKERQEACGKQLAALQQKELELHKQLA 573 Query: 562 RDENEAQSLRQDEQALTQQ 580 DEN LR Q+L++Q Sbjct: 574 ADENARTELRNQLQSLSEQ 592 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/203 (47%), Positives = 134/203 (66%), Gaps = 2/203 (0%) Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 + L E T + E +L+ +N+++ Q++++ E W LN L GS +G KFR Sbjct: 788 ESLSEMTAQKSECSFRLRTHEENKRKIAGFQQELSERRAMSERWAKLNELAGSADGAKFR 847 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 + AQG TLD L+ AN QL +L RY L+R + L ++V+D D +R +LSGGES Sbjct: 848 RIAQGYTLDVLLSYANVQLRQLSRRYRLER-VPDTLALQVIDQDMCDEIRTVHSLSGGES 906 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSLALAL LS L S++ +++SLF+DEGFG+LD+ETL A+DAL++L G+ IGVISH Sbjct: 907 FLVSLALALGLSSLSSNRMKVESLFIDEGFGSLDAETLRVAMDALESLRTQGRKIGVISH 966 Query: 1017 VEAMKERIPVQIKVKKI-NGLGY 1038 V+ M ERIPVQI+V + NG Y Sbjct: 967 VQEMTERIPVQIRVNRAGNGRSY 989 >UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48FW7_PSE14 Length = 1214 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 131/312 (41%), Positives = 178/312 (57%), Gaps = 24/312 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL G ++IDFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQPD 106 LSN+ QS+ L+ R T AEV+F + YRA W NRAR+ Sbjct: 61 LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLE-LTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 LQ R L ++L+++ K + E L GL++ +FTR+++L+Q +F+AFL A Sbjct: 121 KKLQASRQILTDLDSEQVLSNQSKREFEQLIEHRLGLNFEQFTRAVMLAQSEFSAFLKAD 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 KER+ELLE+LT T IY Q+ + + K A L+ L AQAS + L PE + L Sbjct: 181 DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPELLAELE--- 237 Query: 226 QVLTDEEKQLITAQQQEQQ---SLNWLTRQDELQQEASRRQQAL---QQALAEEEKAQPQ 279 Q L D ++QL Q Q++Q WL L+ E Q+A+ QQA ++ A+ Sbjct: 238 QRLNDAQQQLKAHQAQQRQLEIKQQWLIELHRLRDEQLAAQEAITRAQQAWDDQSGARQT 297 Query: 280 LAALSLAQPARN 291 L L P R+ Sbjct: 298 LGQLERLGPQRH 309 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/250 (45%), Positives = 149/250 (59%), Gaps = 11/250 (4%) Query: 795 QAQTLVTQTAETLAQHQQHRPD--DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQ 852 QA+ L+ + + L QHQ D D L ++Q ++ A Q+ ++R + Sbjct: 971 QAKVLLQERDQRLQQHQAQHSDLSDSTQLAAALQQAHEQSALGEQQC-------ADLRAE 1023 Query: 853 LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLAN 912 L +D R L +I + W L SLIGS EGDKFRK AQ LD LVH AN Sbjct: 1024 LSEDQRRRNANSELQARINDANDEYLRWARLASLIGSAEGDKFRKIAQAYNLDLLVHHAN 1083 Query: 913 QQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 QL +L RY L+R S L + V+DT D +R +LSGGE+FLVSLALAL L+ + S Sbjct: 1084 AQLRQLVRRYRLKRGGS-MLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMAS 1142 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 RI+SLF+DEGFG+LD E+L A+DALD L A G+ +GVISHV+ M ERIPVQIKV++ Sbjct: 1143 STLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKVRR 1202 Query: 1033 INGLGYSKLE 1042 G G S +E Sbjct: 1203 -QGNGLSTIE 1211 >UniRef50_UPI0001AF53DF exonuclease SbcC n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF53DF Length = 1215 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/259 (44%), Positives = 158/259 (61%), Gaps = 18/259 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL G +++DFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQPD 106 LSN+ QS+ L+ R T AEV+F + YRA W NRAR+ Sbjct: 61 LSNIGQSKVPDVDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLE-LTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 LQ R L ++L+++ K + E L GL++ +FTR+++L+Q +F+AFL A Sbjct: 121 KKLQASRQILTDLDSEQVLSNQSKREFEQLIENRLGLNFEQFTRAVMLAQSEFSAFLKAD 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 KER+ELLE+LT T IY Q+ + + K A L+ L AQAS + L PEQ+ L Sbjct: 181 DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIIPLAPEQLVELE--- 237 Query: 226 QVLTDEEKQLITAQQQEQQ 244 Q L + ++QL Q Q++Q Sbjct: 238 QRLANAQQQLKAHQAQQRQ 256 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 133/310 (42%), Positives = 179/310 (57%), Gaps = 20/310 (6%) Query: 745 QSLQKAQAQFDTAL-----QASVFDDQQAFLAALM--DEQTLTQLEQLKQNLENQRRQAQ 797 Q+LQ AQ D + Q DD A L L+ D+ + QL Q Q++E Q + Sbjct: 916 QTLQDELAQLDVQIGEWRAQHPQLDD--AALDTLLTYDDAHVEQLRQQLQSIEKNLEQDK 973 Query: 798 TLVTQTAETLAQHQQHRPD--DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ 855 L+ + + L QHQ D D LT ++ Q++LAQ+ Q ++R +L + Sbjct: 974 VLLQERDQRLQQHQAQHSDLSDAGQLTAELQGAQEQLAQSEQHC-------ADLRAELSE 1026 Query: 856 DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL 915 D R L +I + + W L +LIGS EGD+FRK AQ LD LVH AN QL Sbjct: 1027 DQRRRNANSELQARITEANDEYLRWARLAALIGSAEGDRFRKIAQAYNLDLLVHHANAQL 1086 Query: 916 TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT 975 +L RY L+R S L + V+DT D +R +LSGGE+FLVSLALAL L+ + S Sbjct: 1087 KQLVRRYRLKRGGS-MLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLAWMASSTL 1145 Query: 976 RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK-IN 1034 RI+SLF+DEGFG+LD E+L A+DALD L A G+ +GVISHV+ M ERIPVQIKV++ N Sbjct: 1146 RIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKVRRQGN 1205 Query: 1035 GLGYSKLEST 1044 GL ++ ST Sbjct: 1206 GLSTIEVGST 1215 >UniRef50_Q9HWB8 Nuclease sbcCD subunit C n=6 Tax=Pseudomonas aeruginosa RepID=SBCC_PSEAE Length = 1211 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 126/274 (45%), Positives = 168/274 (61%), Gaps = 11/274 (4%) Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD-DGLALTVTVEQI 828 L L +EQ EQL++ E RQ QTL + L QH++ RP+ D AL + Q Sbjct: 945 LLGLSEEQATQWREQLQRLQEEITRQ-QTLEAERQAQLLQHRRQRPETDREALEDNLRQQ 1003 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 ++ LA + Q E + QL+ D R+Q Q L+ ++ + + WG LN LIG Sbjct: 1004 RERLAASEQAYLETYS-------QLQADNQRREQSQALLAELERARAEFRRWGRLNELIG 1056 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDT 948 S GDKFR+ AQG LD LV +N QL +L RY LQR SE L + VVDT D +R Sbjct: 1057 SSSGDKFRRIAQGYNLDLLVQHSNVQLRQLARRYRLQRGGSE-LGLLVVDTEMGDELRSV 1115 Query: 949 RTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 +LSGGE+FL+SLALAL L+ + S K RI+SLF+DEGFG+LD E+L A+DALD L A G Sbjct: 1116 YSLSGGETFLISLALALGLASMASSKLRIESLFIDEGFGSLDPESLQLAMDALDNLQAQG 1175 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 + + VISHV+ M ERIPVQ++V++ G G S L+ Sbjct: 1176 RKVAVISHVQEMHERIPVQVRVQR-EGNGMSSLK 1208 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 145/242 (59%), Gaps = 16/242 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL GE +IDFTREP +S GLFAITGPTGAGK+T+LDA+CLAL+ TPR Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 Query: 61 LSNVSQS--------------QNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQP 105 L + S S + +L+ R A AEV+F + G YRA W R+R++ Sbjct: 61 LESTSASSKVPDGRNELSSNDERNLLRRGCASGYAEVDFVGIDGHRYRARWETRRSRDKA 120 Query: 106 DGNLQVPRVELARCADGKILADKVKDKL-ELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 DG LQ + L ++LA K + E GL++ +FTR++LL+Q +F+AFL A Sbjct: 121 DGALQKSQQSLQDLETQQMLAANKKSEFREQLEQKLGLNFAQFTRAVLLAQSEFSAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R LLE+LT T +Y Q+S +++ A + ++L+ + G L + L A+ Sbjct: 181 SDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQRKQLEQRLEGSLPLAEQARAGLEAA 240 Query: 225 LQ 226 L+ Sbjct: 241 LE 242 >UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA3_FIBSS Length = 1182 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/356 (31%), Positives = 183/356 (51%), Gaps = 33/356 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI + N+NSL GEW IDF FA+NG+F I GPTG+GKT++LDAICL LY +TPR Sbjct: 1 MKIKKIEFCNINSLAGEWTIDFESPDFANNGMFCIAGPTGSGKTSILDAICLGLYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA-------------RNQPDG 107 L + N++MT DT C A+V FE KG Y + WSQ R+ +N+ Sbjct: 61 LGAIKGDSNEVMTYDTLSCYAKVTFECKGVVYSSCWSQRRSAKTKKLQKYAWVLKNETTQ 120 Query: 108 NLQVPRVELARCADGKILADKVKDKLELTATLT---GLDYGRFTRSMLLSQGQFAAFLNA 164 N+ V ++ E+ AT+T GLD+G+FT+SM+L+QG+F FL Sbjct: 121 NVDVSS----------------SNQTEIEATMTRVIGLDFGQFTKSMMLAQGEFNRFLKC 164 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ERA +LE+LTG IY +I+ V + + A ++ ++ + VT+L+ E++ L A Sbjct: 165 SENERAAILEKLTGDGIYRKIAVAVHDLYACANRAVQDIENRLGDVTMLSEEELAELNAK 224 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ T ++K L ++ W ++ + ++ L++A + +P L Sbjct: 225 IEEATAQKKALNENVERLLYICTWFETLHNIESHLNTAKEGLEKAERAKADFEPDREKLE 284 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL-QSTMALRASIRHHAAKQSA 339 A A+ + + L ++ Q+E+ +L ++ L + ++ KQ A Sbjct: 285 RAVRAQEVESSYAEYNSVRDNLGRMKDQLEKSKGKLPEAESNLERATNDNSVKQEA 340 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 108/324 (33%), Positives = 166/324 (51%), Gaps = 12/324 (3%) Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 Q+ E +AL L A L + Q F L F D+Q FLA+ + E Sbjct: 855 QMREAKIALDKSIADLNGHIADAEPKLAELQKLFLENLTLKSFADEQEFLASKLPESDRK 914 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 L Q ++ +++ AQT V + LA+HQQ R T V + ++ A++ KL Sbjct: 915 ALLQKQKLVDDNLTTAQTSVKNFNDQLAEHQQKR---NFEETEDVAKQNRDTAKS--KLN 969 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG-----YLNSLIGSKEGDKF 895 E T + +Q K DA NRQ+ + +++ ++ + DW + + + + GD F Sbjct: 970 ECTVNLATWTEQKKTDALNRQKFSDMQEKLVELKSKRSDWEQMQRWFNGNRLETGNGDVF 1029 Query: 896 RKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE 955 KF Q +TL NL+ +AN L + RY + + + L +++VD +DAVR +SGGE Sbjct: 1030 VKFIQTITLRNLLKIANGYLHDMFPRYEMVTEEN-TLNIQLVDHDNSDAVRPIDNISGGE 1088 Query: 956 SFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDAL-NASGKTIGVI 1014 FLVSL+LAL +S L S IDS+FLDEGFGTLD++ L + L + GK +GVI Sbjct: 1089 GFLVSLSLALGISTLASRNVSIDSMFLDEGFGTLDTKMLQETVVVLQKMQQEKGKLLGVI 1148 Query: 1015 SHVEAMKERIPVQIKVKKINGLGY 1038 +HV+ +K + I+V G + Sbjct: 1149 THVDVVKSELRTHIEVTHNGGRSF 1172 >UniRef50_C9M6Q3 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6Q3_9BACT Length = 895 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 143/238 (60%), Gaps = 7/238 (2%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 ++ + L+NLNSL G W ++F EP S GLFAI GPTGAGK++LLDAICL LY TPRL Sbjct: 9 RLCRVSLENLNSLAGSWSVNF-EEPAYSGGLFAILGPTGAGKSSLLDAICLGLYGATPRL 67 Query: 62 SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA- 120 ++Q N+LMT C A V F GE ++A WSQ+R+ N P G LQ R L R Sbjct: 68 GAITQGTNELMTHGAGSCKASVTFCAAGETWQAVWSQHRSGNHPSGALQPQRHRLGRVKR 127 Query: 121 -DG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +G +++A+K+ D L G+D+ +FTRS+L+ QG++A+FL+A P ERA LLE+ Sbjct: 128 ENGVDTVELVAEKINDVRAKITELLGMDFVQFTRSVLIPQGKWASFLSAPPSERAALLEK 187 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 LTG E Y +IS V E K T A+ + + + E QSL A ++ L K Sbjct: 188 LTGAEKYSKISERVSESWKINETLFAAKNAELDALNVPSCEDAQSLQAEVEELRSRRK 245 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/189 (44%), Positives = 114/189 (60%), Gaps = 6/189 (3%) Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 G+ ++L + +++ L +++ +M Q+E L L+GS KFRKF Q LT Sbjct: 696 GQTEERLNAEKRLSEKRGLLQKEVQEMKGQLELLRELYGLVGS--ATKFRKFVQTLTFHF 753 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L+ AN L L GRY L +E ++ V+D WQ VR R+LSGGESFLVSL+LALA Sbjct: 754 LLRQANVHLDELSGRYALVPDKNEPMDFAVMDRWQGGTVRSARSLSGGESFLVSLSLALA 813 Query: 967 LSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 L S LFLDEGFG LD E+LD L AL+AL +G +GVISHV A+K+RI Sbjct: 814 LGRRRSGGV----LFLDEGFGNLDEESLDGVLTALEALKGAGGLVGVISHVSALKDRISC 869 Query: 1027 QIKVKKING 1035 +I+V + +G Sbjct: 870 RIQVSRSSG 878 >UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50_MARAV Length = 1091 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 14/306 (4%) Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 L + + F AL F D++ FL A + + +L +K N ++R+ + ET Sbjct: 785 LGRMETDFSEALTPVGFSDEEQFLGARLTSERRGEL-AVKANELDERQTDMKARQKDRET 843 Query: 807 -LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 LA + D ++E+++ + + + LR+ ++ +L ++ +++ + Sbjct: 844 RLATEMARKVTDK-----SLEELEPQFKEYEESLRDLRDIIAGLKHKLSENTAAKERIKE 898 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ 925 I ++ W L+ LIGS +G K+R FAQGLT + ++ AN+QL ++ RYLL Sbjct: 899 KQAAIEAQGKECRRWENLHELIGSADGKKYRNFAQGLTFEMMIGHANRQLQKMTDRYLLV 958 Query: 926 RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEG 985 R ++ LE+ VVD +QA +R T+ LSGGESF+VSL+LAL LS + S R+DSLFLDEG Sbjct: 959 RHDAQPLELNVVDNYQAGEIRPTKNLSGGESFIVSLSLALGLSHMASKNVRVDSLFLDEG 1018 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV-------KKINGLGY 1038 FGTLD E LDTAL+ L L GK IGVISHV A+KERI QI+V +I+G G Sbjct: 1019 FGTLDDEALDTALETLSGLQQDGKLIGVISHVPALKERISTQIQVTPQTGGRSQISGPGC 1078 Query: 1039 SKLEST 1044 S L +T Sbjct: 1079 SGLSAT 1084 >UniRef50_A4VHU3 Exonuclease SbcC n=2 Tax=Pseudomonas RepID=A4VHU3_PSEU5 Length = 1217 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 142/352 (40%), Positives = 184/352 (52%), Gaps = 34/352 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++RLKNL SL GE IDFT EP AS GLFAITGPTGAGK+T+LDA+CLAL+ TPR Sbjct: 1 MRILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR 60 Query: 61 LSNVSQ--------------SQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQP 105 L +VS + +L+ R AEV+F V G YRA W RAR + Sbjct: 61 LDSVSPLNKVPEVDAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI 120 Query: 106 DGNLQVPRVELARCADGKILADKVKDKL-ELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 DG LQ L G +LA K + EL GL +FTR++LL+Q +F+AFL A Sbjct: 121 DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ER LLE+LT T +Y ++ FE K A+ L +L+ QA G+ L PEQ + L Sbjct: 181 DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQREVLENE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLN----WLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 Q DE K L QQ+ ++L WL+ L+ E Q LQ A E E Sbjct: 241 HQAQLDELKAL----QQQLKALEAQRQWLSELQRLENEREAACQQLQDAEDERENLAEAR 296 Query: 281 AALSLAQ---PAR-------NLRPHWERIAEHSAALAHIRQQIEEVNTRLQS 322 L L + P R +L P E+ A+ A L H Q +++ LQS Sbjct: 297 RILDLFEQLAPQRHRFLRLQDLGPLLEKAADSLARLQHEEQAVQQRLAELQS 348 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 133/322 (41%), Positives = 179/322 (55%), Gaps = 22/322 (6%) Query: 729 LHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA-----SVFDDQQAFLAAL--MDEQTLTQ 781 LHS+QQ +Q+ LQ+ + + L A DD LA L MD+ L + Sbjct: 904 LHSEQQNCRQRHA----ELQQERDALNAELGAWRAAHPALDD--TILAQLLQMDDALLAE 957 Query: 782 LEQ-LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Q L+QN E R + L LA HQQ + + EQ+QQ A+ + Sbjct: 958 ARQRLQQNAETLTRCRERL-DGCLNRLASHQQQQAE-----VPEAEQLQQAHAEQLHRCE 1011 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 + E R L D R+Q L+ QI + +++ WG + +LIGS +G FRK AQ Sbjct: 1012 QAEQRCAETRAALLDDDKRRRQSHALLAQIDEARAEMQRWGRIAALIGSSDGGAFRKIAQ 1071 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 LD LV AN QL +L RY L+R S L + V+DT D +R +LSGGE+FLVS Sbjct: 1072 AYNLDLLVQHANVQLRQLARRYRLKRGGS-PLGLLVMDTEMGDELRSVHSLSGGETFLVS 1130 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALAL L+ + S K RI+SLF+DEGFG+LD E+L A+DALD+L A G+ + VISHV M Sbjct: 1131 LALALGLASMASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEM 1190 Query: 1021 KERIPVQIKVKKINGLGYSKLE 1042 ERIPVQI+V++ G G S L+ Sbjct: 1191 HERIPVQIQVQR-QGNGQSGLK 1211 >UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=C7M6V9_CAPOD Length = 1182 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 211/764 (27%), Positives = 344/764 (45%), Gaps = 161/764 (21%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L N+ S++G + ++ EP S GLFAITG TGAGK+T+LDAICLALY++TPR Sbjct: 1 MKILSVSLHNIASIEGPFTLNLEAEPLKSVGLFAITGATGAGKSTILDAICLALYNDTPR 60 Query: 61 LSNVSQSQ--------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 L+ S +L+ + A+V F+ V G+ Y A W RA N+ Sbjct: 61 LATTKNSVAIADGSAEVQVNNVKNLLRKGAISGYAKVVFQAVDGKTYEAEWQVRRAYNKL 120 Query: 106 DGNLQVPRVELARCADGKILADKVKD-KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G +Q ++L D +++A+ K LE GL + FT+S++L+QG F +FL A Sbjct: 121 SGAIQPETLQLTCLTDNQLIAENRKTLVLEKIKECVGLTFDEFTKSVILAQGDFTSFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R+++LE+LTGTEIY +IS V+E +K + EL+ L+ Q + LT E+ +LT Sbjct: 181 NDDKRSDILEKLTGTEIYTRISKQVYELNKQHKNELQLLEKQLENIVFLTEEERSALTE- 239 Query: 225 LQVLTDEEK------QLITAQQQEQQSLN-------W---LTRQDELQQEASRR------ 262 Q+ DEE+ L T ++Q+Q N W + +++ +QE + + Sbjct: 240 -QLTADEERLKTLQASLATLKEQQQWFDNQKLYTQQWQEAIANKEKAEQEKTSQAERFGE 298 Query: 263 ---------------------------QQALQQALAEEEKAQPQLAALS----------- 284 QQ L++A AE+E+ A +S Sbjct: 299 LAIIEQLQAIKGDILTEQREKELLATAQQHLKEATAEKERLTANKAKVSEQKLLTENDLA 358 Query: 285 LAQPARNL-RPHWERIAEHSAALAHIRQ-------QIEEVNTRLQSTMALRASIRHHAAK 336 A+ A + +P R E LA + Q Q E T LQ+ + H K Sbjct: 359 TAKKAYEIAKPFIARAKELDVRLAELTQIFEQKQQQQEAKETALQAKKESLEKVTEHIQK 418 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFS---QQTSDR--------EHLRQW 385 +QQ++Q LNT E +R A W Q QQ +++ E LRQ Sbjct: 419 GERYIQQEEQWLNTHPDEAQLYRN-----ALWLKQLVEEQQQLNEKLTAHSQAEERLRQQ 473 Query: 386 QQQLTHAEQKLNALAAITLTLTADE---VATALAQHAEQRPLRQHLVALHGQIVPQQKRL 442 +L A+ + AL + + + A + TAL + R + +H+ K+ Sbjct: 474 LNEL-KAQYPIQALPSTDIEMLAKQQKAYLTALQVYQADREIAKHI-----------KQY 521 Query: 443 AQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---------KTL 493 +V + + QE + + E QR KT+++A + C+ RI K + Sbjct: 522 TDAKVQREALLQEMQNTQSQILETLQRL--KTEKIA-TQIACDTAERIYQRAQIENTKDV 578 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 R L G+ CP+CGS HP N + +A E+ + + +E T + QL Sbjct: 579 AFLREHLVEGEACPVCGSVHHP------------NAHKAVA-EHLIDTVQQEFLTAKKQL 625 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQ-------WQ----AVTASLNITLQPLDDIQPWL 602 + +TK++ E E + L++ ++ T + WQ ++ S+ T P I+ ++ Sbjct: 626 ETLTKEVITKETELKELQKRIESQTAENAERTDLWQQESERLSQSVYYTTYPSVKIEEYI 685 Query: 603 D---AQDEH-----ERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 A+ EH ER +L++ L ++ + + Y+QQ Sbjct: 686 TDKIAKTEHLLAENERLFEVLNRLKSLTDELNTLAKDVENYKQQ 729 >UniRef50_C3QPK2 ATP-dependent exonuclease sbcC n=9 Tax=Bacteroides RepID=C3QPK2_9BACE Length = 955 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 114/303 (37%), Positives = 179/303 (59%), Gaps = 28/303 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL S++G ++DF EP S G+FAI+GPTGAGK+TLLDA+CLALY + PR Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 Query: 61 LSNVSQSQN---------------DLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQ 104 + ++ N +L+ R T++ AEV+F + G YR+ WS R RN+ Sbjct: 61 FATSVENVNLADVGDNQINQSDVRNLLRRGTSDGYAEVDFLGIDGRRYRSRWSVRRTRNK 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G+LQ +E+ K K+ L L GL Y +FTR++LL+Q FA FL + Sbjct: 121 INGSLQPQTLEVKELDTEKEFQGTKKELLIQLVELVGLTYEQFTRTVLLAQNDFATFLKS 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL--- 221 K +AELLE+LTGT +Y +IS V+ ++K+A+ E+ +Q + + + L+ E++ +L Sbjct: 181 KGAAKAELLEKLTGTGVYSRISQEVYARNKAAQEEVTLIQNRMNVIELMPEEELLALQKE 240 Query: 222 --------TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEE 273 A +++L ++ +QL + + Q W +Q E Q+E + R++ LQ ALA + Sbjct: 241 KELSIEKRAAGIKLLAEQNEQLNVVRSLKIQEELWKKKQQEEQEEQA-REKVLQGALASQ 299 Query: 274 EKA 276 E+ Sbjct: 300 EEG 302 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 89/185 (48%), Positives = 126/185 (68%), Gaps = 2/185 (1%) Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 +L Q A N+ + + +++A+ E W LN LIGS +G KF+ AQ TL+ L+ A Sbjct: 764 RLLQQAKNKLTVEQIAKELAEKQTVAERWAKLNKLIGSADGAKFKVIAQSYTLNLLLLHA 823 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 NQ L+ L RY LQ + + L ++V+D D +R +LSGGESFL+SLALAL LS L Sbjct: 824 NQHLSYLSKRYKLQ-QVPDTLALQVIDCDMCDEIRTVYSLSGGESFLISLALALGLSSLS 882 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV- 1030 S+ +++SLF+DEGFG+LD+E+L TA++AL+ L G+ IGVISHV+ M ERI VQ++V Sbjct: 883 SNNLKVESLFIDEGFGSLDAESLRTAMEALEQLQMQGRKIGVISHVQEMSERISVQVQVH 942 Query: 1031 KKING 1035 KK+NG Sbjct: 943 KKVNG 947 >UniRef50_D1Y1F7 Exonuclease (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1F7_9BACT Length = 589 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/303 (40%), Positives = 170/303 (56%), Gaps = 23/303 (7%) Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQL----EQLKQNLENQRRQAQTLVTQTAE 805 AQAQF L+ F ++ A+ A + E+ + L E+L + E+ R QA L+ + Sbjct: 298 AQAQFAERLKRLGFAEESAWQTAALSEEEIAALRACSEELWRREESLRSQA-LLLDEEER 356 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 L + D L + +E EL E ++G Q L+ D + R++ Sbjct: 357 ALGDAPERAAAD---LKIALEACGTELT-------ELLKNRGADEQTLRHDDECRRRLGE 406 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ 925 L Q A+ + E W LN IGS GD+F ++ QGLT LV AN QL +L RY L+ Sbjct: 407 LRQAEARRRKVYELWSDLNDRIGSASGDQFSRYVQGLTFRRLVRAANAQLAQLSERYRLK 466 Query: 926 RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEG 985 A +AL ++VVD WQ VR +R LSGGESF+VSLALALALS + + ++DSLFLDEG Sbjct: 467 VAADDALRLDVVDLWQGGEVRTSRNLSGGESFIVSLALALALSHGM-REVKVDSLFLDEG 525 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK-------INGLGY 1038 FGTLD ETL+T LD L+ L SGK +GVISHV+ ++ERI + + ++G G Sbjct: 526 FGTLDEETLETVLDCLNRLRESGKLVGVISHVKTLRERIDAHLTLTPGPGGHSLLSGPGC 585 Query: 1039 SKL 1041 S+L Sbjct: 586 SRL 588 >UniRef50_Q5P495 Exonuclease SbcC n=3 Tax=Proteobacteria RepID=Q5P495_AZOSE Length = 1282 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 123/324 (37%), Positives = 177/324 (54%), Gaps = 27/324 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R NL SL G ++IDF EP AS GLFAI+GPTGAGK+TLLDA+CLAL+ +TPR Sbjct: 1 MKILAIRGNNLASLAGAFEIDFQAEPLASTGLFAISGPTGAGKSTLLDALCLALFDDTPR 60 Query: 61 LSNVS----------------QSQNDLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARN 103 L N + +++ R AE AEV+F G YRA WS RAR+ Sbjct: 61 LRNAGGRGIELPDVGTETTLPNDRRNILRRGCAEAQAEVDFRGNDGVGYRARWSVRRARS 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDK-LELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 + G LQ + L R D + + ++K + L A GL + +FTR++LL+Q +F FL Sbjct: 121 KASGKLQQSEMSLCRIEDLQPVGGRLKSEVLPAIAARIGLSFEQFTRAVLLAQNEFFTFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 A ERA LL+ LT T+ + +S +E++K + +LE L+AQ L E+ L Sbjct: 181 KAGEDERATLLQTLTATDRFEVLSRRAYERNKREQQKLEALKAQLEHQQPLAAEERTHLD 240 Query: 223 ---ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 AS + E++ L ++Q Q L W D ++ + + L +AL + E A P+ Sbjct: 241 EARASTKAALAEQEVL---EKQLQTQLQWHRDLDLAREREAEARAMLDRALTQRETANPR 297 Query: 280 ---LAALSLAQPARNLRPHWERIA 300 LA + QPAR + ER+A Sbjct: 298 RGHLARVEAVQPARAMVAETERLA 321 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 2/197 (1%) Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 E+ L++DA+ R+ L++ I ++ W +N LIG+ +G KFR +AQ LTLD L Sbjct: 1085 ELELALRRDAEVREHSAKLVEAIEAQSRAARIWWQMNELIGAADGKKFRNYAQQLTLDIL 1144 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 + AN L L RY L+R +L + VVD + R +LSGGESFLVSLALAL L Sbjct: 1145 LAYANAHLKDLARRYRLER-VPNSLGLMVVDQDMGNEQRSVHSLSGGESFLVSLALALGL 1203 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 + L SH+ +++SLF+DEGFG+LDS+TL A+DALD+L + G+ +GVISHV+ M ERI + Sbjct: 1204 ASLSSHRVQVESLFIDEGFGSLDSDTLRVAIDALDSLQSMGRMVGVISHVQEMTERIGTR 1263 Query: 1028 IKVKKINGLGYSKLEST 1044 I VK+I G G S++ T Sbjct: 1264 IHVKRIPG-GQSRVVVT 1279 >UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonadales RepID=Q3ICS6_PSEHT Length = 1217 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 111/275 (40%), Positives = 165/275 (60%), Gaps = 23/275 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI ++R+ NL S+ + +IDF P GLFAITG TGAGK+T+LDAICLALY +T R Sbjct: 1 MKITAVRIHNLASI-VDAEIDFLAAPLKDAGLFAITGDTGAGKSTILDAICLALYAKTAR 59 Query: 61 LS----NVSQSQND---------LMTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPD 106 L N + Q D L+ R T+ AEV+F + E+YRA WS NR+R + D Sbjct: 60 LGGDRGNKVEFQGDSIRLNDARNLLRRGTSNGYAEVDFVGQDKESYRACWSVNRSRGKSD 119 Query: 107 GNLQVPRVELARCADGKIL-ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 GNLQ + L D ++ +DK K ++ A + GL + +F+R++LL+Q +FAAFL A Sbjct: 120 GNLQAAQHTLHLLPDDTLISSDKSKTVKQIEAKI-GLTFDQFSRAVLLAQHEFAAFLKAT 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 ERA+LLE LTGT+ + +I +FE++K + + E LQA + TLL+ +++ + SL Sbjct: 179 GDERAQLLECLTGTDKFSRIGVRIFERNKELKEKFELLQASLASYTLLSEDELAAKQTSL 238 Query: 226 QVL---TDEEKQLITAQQQEQQSLNWLTRQDELQQ 257 L + K+ +T +Q+LNW + + L+Q Sbjct: 239 NELKLQIEHTKKTLTT---TEQNLNWYKQANTLEQ 270 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 87/167 (52%), Positives = 109/167 (65%), Gaps = 2/167 (1%) Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 QV+ W LN ++G G R AQ TL L+H AN L L+ RY L +L++ Sbjct: 1051 QVDQWHLLNKVLGDATGKTMRNLAQTQTLKILLHYANSHLKTLNKRYEL-TAIEHSLDIA 1109 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 ++D AD R TLSGGESFLVSLALAL L+ L S+K +I+SLF+DEGFGTLDSETL Sbjct: 1110 IIDRDMADEQRSVNTLSGGESFLVSLALALGLASLSSNKVQINSLFIDEGFGTLDSETLS 1169 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 A+DALD+L A G+ +GVISHV M ER+ Q+ V K G GYS +E Sbjct: 1170 VAMDALDSLQAQGRKVGVISHVSEMSERVATQVHVAKKPG-GYSSVE 1215 >UniRef50_Q08QT9 Exonuclease SbcC n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08QT9_STIAU Length = 1259 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/245 (40%), Positives = 140/245 (57%), Gaps = 18/245 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R +NL SL G++ + P GLFAITG TGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MKILAIRGRNLTSLAGDFALALDEPPLDKLGLFAITGATGAGKSTLLDALCLALFDRTPR 60 Query: 61 LSN-----------------VSQSQNDLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRAR 102 L +S ++ R AE AEV+F+ + G+ YRA WS RAR Sbjct: 61 LGGRGGVPVGRSGEEDEDRLLSHDVRGVLRRGAAEGFAEVDFQGRDGKRYRARWSVWRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 N+ +G + + L A G++ + LE GL + +F RS LL+QG+FAAFL Sbjct: 121 NKAEGRFRPQELSLTDVASGQLFGRTKLEVLEAIEQKLGLSFDQFRRSALLAQGEFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 A ERAELLE +TGTEIY ++S E+HK+ + LE++ + ++ LT E+ + Sbjct: 181 RADANERAELLERMTGTEIYSRLSIAAHERHKTEQAGLERMSQGLAAISRLTDEERAAAE 240 Query: 223 ASLQV 227 +L V Sbjct: 241 GALAV 245 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%) Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 + +L QD + R++ + + + + W L+ LIGS +G KF+ FAQ LTLD L+ Sbjct: 1048 KARLDQDHEARERHGAQERALEERRRAAGVWKTLHELIGSADGKKFKVFAQSLTLDALLL 1107 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 AN L L RY L R L+++VVD D VR +LSGGESFLVSLALAL L+ Sbjct: 1108 HANAHLQELARRYRLMRVPGHDLDLQVVDQDMGDEVRAVASLSGGESFLVSLALALGLAS 1167 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 L S ++++LF+DEGFGTLD +TL+ AL LDAL A+G+ +G+ISHV + ERI VQ++ Sbjct: 1168 LSSETAQVETLFIDEGFGTLDPQTLEVALATLDALQATGRQVGIISHVSGLAERIGVQVR 1227 Query: 1030 VKKINGLGYSKL 1041 V K G G S+L Sbjct: 1228 VVKQGG-GRSRL 1238 >UniRef50_UPI000197B202 hypothetical protein BACCOPRO_01552 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B202 Length = 793 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 197/669 (29%), Positives = 298/669 (44%), Gaps = 102/669 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L ++NL S++ IDF P LF I G TGAGKTT+LD+ICLALY+ETPR Sbjct: 1 MKLQKLTIRNLASIEDA-VIDFEHGPLGEESLFLICGETGAGKTTILDSICLALYNETPR 59 Query: 61 LSNVSQSQ-----------------ND---LMTRDTAECLAEVEFEVKGE-AYRAFWSQN 99 + + ND LM R+T E +E+EF + Y A W Sbjct: 60 MDRAENERYKDAAQTASGRKEDIAINDNRQLMRRNTGEAWSELEFTGSNDIPYTARWYVA 119 Query: 100 RARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 RA + G+LQ + L G L + K E+ + GL + +F R+ LL+QG F Sbjct: 120 RAHRKVSGSLQSVKWTLENRKTGIQLTKIAEIKAEIQKAV-GLSFEQFCRTTLLAQGDFT 178 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 FL +K E++++LE+LTGT IY +I A ++ K R E + + +G+ LLT E+ + Sbjct: 179 KFLQSKESEKSDILEKLTGTGIYSRIGAEIYAASKQRRLAYETQKQKLNGIRLLTEEEKE 238 Query: 220 SLTAS----LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALA---- 271 +L S LQ TD +KQL T Q+ NWL R EL++ +RQQ + +LA Sbjct: 239 TLRTSIRQNLQEATDCKKQLDTVTQKR----NWLQRNKELKEARQQRQQEWETSLAALKT 294 Query: 272 -EEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIE-EVNTRLQSTMALRAS 329 E + + L +L+ ARN + + L ++E + + Q + LR Sbjct: 295 DEYRQREQTLRDWNLSAEARNQLQTFNHLTTQQMELEKETSRMEAQYHILCQGLVGLR-- 352 Query: 330 IRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFS-------QQTSDREHL 382 +Q +LQ++QQ + +L+E + E G A ++ R+ + Sbjct: 353 ------EQLNDLQEKQQQTSGFLKEKAEYAPMFEESQGILADLKNLMEAERKEQEYRQRV 406 Query: 383 RQWQQQLTHAEQKL-----------NALAAI-------TLTLTADEVATALAQHAEQRPL 424 W + E+ L A AA+ T + A +Q ++ Sbjct: 407 ITWTAAIPQLEKSLLSKEKNLQEKNQASAALQKEIDQQTKSWEAFNTPRLQSQKSDLEKR 466 Query: 425 RQHLVALHGQIV---PQQKRLAQLQVAIQN-------VTQEQTQRNAALNEMRQRYKEKT 474 ++ LV+L ++ +Q L LQ Q V QEQ N+ +QRY+E Sbjct: 467 KEGLVSLLNELTLLREKQISLNTLQETEQKIFNQLITVQQEQENLQTTFNQAKQRYEETD 526 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS--TSHPAVEAYQALEPGVNQSRL 532 K E AR EA RA+L AG CP+CG T P EA+Q+L L Sbjct: 527 ALYRKQKEATENWAR----EA-RARLVAGDHCPVCGQKITDIPHDEAFQSL--------L 573 Query: 533 LALENEV----KKLGEEGATLRGQLDA---ITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 L + E+ K E G +L+ L +T+Q Q ++ +Q Q +Q Q + Sbjct: 574 LPIYEELKFRQKNYDEAGQSLKANLSLQKQLTEQQQASHKNTENFKQGYQITRRQVQDLC 633 Query: 586 ASLNITLQP 594 L I QP Sbjct: 634 TFLGIRPQP 642 >UniRef50_D0YZM5 Exonuclease SbcC n=5 Tax=Photobacterium RepID=D0YZM5_LISDA Length = 1265 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 117/318 (36%), Positives = 169/318 (53%), Gaps = 33/318 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR +NL SL+ +++IDF GLFAITG TGAGK+TLLDAICLAL+ PR Sbjct: 1 MKILALRGENLASLQSQFEIDFAGGRLGDAGLFAITGKTGAGKSTLLDAICLALFDRIPR 60 Query: 61 LSNVSQSQND-------------------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNR 100 L S +ND +++R E AEV+F G +RA W R Sbjct: 61 LQ--SNKKNDAEIGRDDDDNRIKANDVRSILSRGKGEGFAEVDFVANDGSYWRAHWHVRR 118 Query: 101 ARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 AR + +G +Q L G+ A K ++ L GL + +F R+++L QG+FAA Sbjct: 119 ARGRAEGKIQAAEQWLENIETGQRFAGKKQELQAEIENLIGLSFDQFRRAVMLPQGEFAA 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL A ERA LLE +TG EIYG++S E+ K + +L +LQ + + LLT E+ ++ Sbjct: 179 FLKAGADERAALLERMTGGEIYGRLSIAAHERAKDEKLKLTQLQGKLGDIALLTDEEREA 238 Query: 221 LTASLQVLTDEEKQLITAQQQE----QQSLNWLTRQDELQQEASRRQQALQQALAEEEKA 276 L A L ++ ++ QQQ+ +Q + L ++L +Q L+QA ++ A Sbjct: 239 LNAQLATAREQ----VSHQQQKLELLKQHQDVLVNAEKLTHRVGESEQQLEQAKQAQQLA 294 Query: 277 QP---QLAALSLAQPARN 291 +P QL A PAR Sbjct: 295 EPRYRQLNQYEQALPARG 312 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/195 (48%), Positives = 123/195 (63%), Gaps = 1/195 (0%) Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 ++RQ+L+Q +Q L +A Q E W ++ LIGS G+KFR AQGLTL L Sbjct: 1069 QLRQRLEQGVQAEKQAGDLRTALATQQTQTELWMEMSDLIGSATGNKFRTLAQGLTLQQL 1128 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 V AN+ L L RY LQ L ++V+D D VR +LSGGESFLVSL+LALAL Sbjct: 1129 VINANEHLYELAPRYALQPVPGSPLALQVIDHDMGDEVRSVESLSGGESFLVSLSLALAL 1188 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 + L + ++ SLF+DEGFGTLD ++L+ AL LDAL A G+ IGVISHV + ERI VQ Sbjct: 1189 ASLAADTRQLGSLFIDEGFGTLDPDSLEMALACLDALQADGRQIGVISHVGTLVERIGVQ 1248 Query: 1028 IKVKKINGLGYSKLE 1042 + V+ G G S++E Sbjct: 1249 VAVEAQGG-GRSRIE 1262 >UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICU8_VIBHO Length = 1255 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 137/247 (55%), Gaps = 22/247 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR +NL S++ ++IDF GLFAITG TGAGK+TLLDAICLALY PR Sbjct: 1 MKILALRGENLASIQHPFEIDFVNSRLGEAGLFAITGKTGAGKSTLLDAICLALYDRMPR 60 Query: 61 LSNVSQSQND-------------------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNR 100 L + +ND +++R AE AEV+F+ G +RA W R Sbjct: 61 LQ--ANKKNDAEIGLGDEAARLKANDVRSILSRGKAEGYAEVDFKANDGSCWRAHWHVRR 118 Query: 101 ARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 AR + DG +Q L +G+ + K ++ L L GL Y +F R+++L QG FAA Sbjct: 119 ARGKADGRVQASEQWLENLENGQRFSGKKQEVLGEIERLVGLSYEQFRRAVMLPQGDFAA 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL A ERA LLE +TG EIY ++S +E+ K+ + LE L+ + G+ +L E+ Sbjct: 179 FLKASTDERAALLERMTGGEIYSRLSVAAYEKSKAEKNALETLREKLGGICILPEEEKTE 238 Query: 221 LTASLQV 227 L L+ Sbjct: 239 LREKLEA 245 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/194 (46%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 +R+ L+ Q L Q+ + Q E W + LIGS G+KFR AQ LTL LV Sbjct: 1060 VRRTLEASEQAEAQAGELRSQLEKQQQHAEMWMKIADLIGSASGNKFRNLAQSLTLQQLV 1119 Query: 909 HLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 AN L L RY LQ S L ++VVD D VR +LSGGESFLVSLALALAL+ Sbjct: 1120 LEANVHLQELAPRYALQTVPSSPLSLQVVDHDMGDEVRSVESLSGGESFLVSLALALALA 1179 Query: 969 DLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 L + ++ SLF+DEGFGTLD ++L+ AL LD L A G+ IGVISHV + ERI Q+ Sbjct: 1180 SLAADTRQLGSLFIDEGFGTLDPDSLEMALACLDTLQADGRQIGVISHVGTLVERIGTQV 1239 Query: 1029 KVKKINGLGYSKLE 1042 V+ + G G S+++ Sbjct: 1240 TVEALGG-GVSRVQ 1252 >UniRef50_D0LY14 SMC domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LY14_HALO1 Length = 1280 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 103/267 (38%), Positives = 148/267 (55%), Gaps = 19/267 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL+G +++ R P A GLFAITGPTG+GK+TLLDA+C+AL+ TPR Sbjct: 1 MKILAIRGKNLASLEGSFELALDRGPLAQTGLFAITGPTGSGKSTLLDALCVALFDRTPR 60 Query: 61 L----SNVSQSQND--------------LMTRDTAECLAEVEFEVKGE-AYRAFWSQNRA 101 L +NV + D L+ R AEV+F + + YRA W RA Sbjct: 61 LDTSKNNVFVGRADQDQKLRVGASDVRGLLRRGCGRGEAEVDFIGRDQHTYRARWEVWRA 120 Query: 102 RNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAF 161 RNQP G LQ + L G+ L K + L GLD+ +F RS LL+Q +FA+F Sbjct: 121 RNQPGGKLQNQTMALEDLTTGRDLTGKKTETLREIEARLGLDFEQFRRSALLAQNEFASF 180 Query: 162 LNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 L A + R+ELLE +TGT+IY IS + ++ +K A T LE+L + S +L ++ ++L Sbjct: 181 LRADERSRSELLERMTGTDIYSDISKVAYQHYKDASTRLEQLLERVSEHAVLGDDEREAL 240 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNW 248 + +EK + ++ W Sbjct: 241 ERARSQAEADEKARAAELALAEAAIRW 267 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Query: 853 LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLAN 912 L++D + R + L +AQ ++ L+ LIGS +G KFR FAQ LTLD L+ AN Sbjct: 1088 LRRDDEARSHRGKLQDDLAQQRARLTVLANLSELIGSADGKKFRVFAQSLTLDALLAHAN 1147 Query: 913 QQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 QL +L RY L+R L+++VVD D VR ++LSGGESFL SLALAL LS L + Sbjct: 1148 AQLDQLVPRYHLERVPGHDLDLQVVDRDMGDEVRSVQSLSGGESFLASLALALGLSSLAA 1207 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 TR++SL +DEGFGTLD + + AL LDAL ASG+ +GVISHV + ER+ V + V+ Sbjct: 1208 RDTRVESLLIDEGFGTLDPHSFELALSVLDALQASGRKVGVISHVPGLAERVGVCVAVRP 1267 Query: 1033 INGLGYS 1039 G G S Sbjct: 1268 -QGAGRS 1273 >UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5S8_9DELT Length = 646 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 119/304 (39%), Positives = 164/304 (53%), Gaps = 28/304 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL G +++DF P GL AITGPTGAGKTTLLDAICLAL+ TPR Sbjct: 1 MKILAVRGKNLASLHGHFEVDFRAPPLDRAGLVAITGPTGAGKTTLLDAICLALFDRTPR 60 Query: 61 LSNVSQ----------------SQND---LMTRDTAECLAEVEF-EVKGEAYRAFWSQNR 100 +N ND ++ + AEV+F V + A W R Sbjct: 61 FANRGGVTIGRAPGGAPGEGGLRANDVRGILRHGAVDGWAEVDFLGVDDRVWTARWEVRR 120 Query: 101 ARNQPDGNLQVPRVELARCADGKIL-ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 AR + DG +Q +++L+ G+ + AD+ D LE GLD+ +F RS+LL+QG+FA Sbjct: 121 ARGRHDGRIQGQQMKLSDAVTGRAVEADRKLDVLEAIEARLGLDFDQFRRSVLLAQGEFA 180 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 AFL A +RAELLE +TGT +Y ++ FE+ K A EL+ L+ + G+ L Sbjct: 181 AFLEASGSDRAELLERMTGTRLYRELGRAAFERAKQADAELDLLRRELDGLDSLDEAART 240 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 L A ++ LT +L A+ Q + W R EL++ A+R A AE E A+ Sbjct: 241 QLKAQVEALTQARAELTRARAQAEADRTWHARLGELERGAAR-------AKAEVEGAEQA 293 Query: 280 LAAL 283 L AL Sbjct: 294 LRAL 297 >UniRef50_O68032 Nuclease sbcCD subunit C n=4 Tax=Alphaproteobacteria RepID=SBCC_RHOCA Length = 1238 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 139/238 (58%), Gaps = 16/238 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILS+ +N+ SL ++IDFT P A GLFAITG TGAGK+++LDA+CLALY + PR Sbjct: 1 MRILSISGQNIASLAAPFRIDFTTAPLAGAGLFAITGETGAGKSSILDAMCLALYGDAPR 60 Query: 61 LSNVSQSQN---------------DLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQ 104 LS ++S ++ R A AEV F + G Y A W RAR++ Sbjct: 61 LSAGARSDKVPDAAGEEISAADSRAILRRGAATGWAEVRFAGRDGLEYIARWQARRARDK 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G LQ LAR DG++LA + + E A LTGL Y F R++LL+QG F AFL A Sbjct: 121 VEGKLQTVARSLARAEDGQVLAAQTQAVSEQVAALTGLSYEEFRRTVLLAQGDFDAFLRA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 ERA LLE++TGT +Y +S V+E+ + AR E +L A+A+ LL +LT Sbjct: 181 DTGERATLLEKVTGTGLYRAVSIRVYERTEMARAEHAQLLARAAEHRLLDDAARAALT 238 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 123/195 (63%), Gaps = 3/195 (1%) Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 G++ +L +DA R L + ++E W +N IG++ GD+F + AQ +TLD Sbjct: 1040 GQLSAELARDAATRAALAGLAVETEAARAELEVWEAVNKAIGARSGDRFARIAQAITLDV 1099 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 LV AN+ L L+ RY L+R A +L+VE D D R TR+LSGGE FLVSLALALA Sbjct: 1100 LVEHANRHLADLNPRYRLRRAAELSLQVE--DRDMGDTARATRSLSGGERFLVSLALALA 1157 Query: 967 LSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 LS + T +LF+DEGFG LD+ +LD A+DAL+ L + G+ +GVISHVEAM+ RI Sbjct: 1158 LSQMGGKGTFAGTLFIDEGFGALDAGSLDLAIDALETLQSQGRQVGVISHVEAMQARIAT 1217 Query: 1027 QIKVKKINGLGYSKL 1041 +I V+K G G S L Sbjct: 1218 RIAVRKEGG-GRSSL 1231 >UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetobacter radioresistens RepID=C6RPI9_ACIRA Length = 1200 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/235 (41%), Positives = 136/235 (57%), Gaps = 14/235 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI+ L+L+NL SL GE +I+F +P GL AITG TGAGK+TLLDA+CLAL+++ PR Sbjct: 1 MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60 Query: 61 LS-------NVS------QSQNDLMTRDTAECLAEVEFEVKGEA-YRAFWSQNRARNQPD 106 L +VS S +++ R TA +E+EF + + Y A W RAR + Sbjct: 61 LKTHEGKLKDVSGQDVQIDSTLNILRRGTAHAYSELEFIAQNQKRYIARWELKRARGHAE 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ + L DG +L DK K+ + L GL + +FTR++LL+Q + AFL AK Sbjct: 121 GKLQAVQRALVCVTDGNMLTDKAKECDKQVLELIGLSFEQFTRAVLLAQSEVGAFLKAKD 180 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 ERA+LLE LT + I+ + FE+ K R + EKL V LL+ EQ+ L Sbjct: 181 NERADLLEYLTNSNIFSLVGKAAFERTKMVRVQREKLNELIGHVELLSTEQMAQL 235 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 80/163 (49%), Positives = 111/163 (68%), Gaps = 2/163 (1%) Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W ++ LIGS +G +F+K AQ LD LV ANQQL L RY LQR ++L + ++D Sbjct: 1037 WSRISELIGSADGARFKKLAQEHHLDILVEYANQQLQPLAPRYQLQR-IEDSLGLAIIDH 1095 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 VR +LSGGE+FLVSLALALA++++ S +I+SLF+DEGFGTLD +L +D Sbjct: 1096 HMNGEVRPVLSLSGGETFLVSLALALAIANMASGSMKIESLFIDEGFGTLDPASLHVVMD 1155 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 ALD L G+ + +ISHV+ M ERIP+QI+VK + G G S+++ Sbjct: 1156 ALDRLQGQGRKVTLISHVQEMHERIPIQIQVKAV-GSGASRIQ 1197 >UniRef50_D0SUA4 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SUA4_ACILW Length = 1201 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 124/325 (38%), Positives = 172/325 (52%), Gaps = 16/325 (4%) Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 W Q H + SQ Q + QQ Q +Q QA A + +Q L + Q Sbjct: 889 WHQTHLKLQEFISQLQQIDQQLAQYQQDIQAWQAAHPQVTAAQI---EQWLSIDLSNHQR 945 Query: 779 LTQ-LEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + Q L KQ LEN R Q L Q L +H E+I+Q+L HQ Sbjct: 946 IRQNLANQKQALENARTAWQLLEEQYQAHLKLQPEHE----------FEEIEQKLGMLHQ 995 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 + E +L+ +A+N+ QQI Q+ + WG + LIG KEG KF+K Sbjct: 996 EKIMQQEVLNETDAKLRMNANNQNTYAKYQQQIEQIKAEEYRWGRIYDLIGHKEGTKFQK 1055 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 AQ LD LV ANQQL L RY L R ++L + ++D VR +LSGGE+F Sbjct: 1056 IAQEHHLDILVEYANQQLQPLAPRYQLHR-IPDSLSLAIIDLDMNSEVRPVLSLSGGETF 1114 Query: 958 LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 LVSLALALA++++ S +++SLF+DEGFGTLD +L ++ALD L + G+ + +ISHV Sbjct: 1115 LVSLALALAIANMASGSMKLESLFIDEGFGTLDPASLHMVMNALDHLQSQGRKVVLISHV 1174 Query: 1018 EAMKERIPVQIKVKKINGLGYSKLE 1042 + M ERIPVQI+VK + G G S ++ Sbjct: 1175 QEMHERIPVQIQVKPV-GAGASTIQ 1198 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 125/221 (56%), Gaps = 20/221 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L L NL SL G IDF P A GL AITG TGAGK+TLLDA+CLALY+E PR Sbjct: 1 MKILRLSLHNLASLTGTHHIDFESSPLAHAGLIAITGKTGAGKSTLLDAMCLALYNEIPR 60 Query: 61 LSNVSQSQND-------------LMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQPD 106 L + S D ++ R AE+EF + + Y A W RAR + D Sbjct: 61 LKGATGSLKDAGGQDVSIKDSKNILRRGCVHGFAELEFIALDSKRYMARWEIKRARQKVD 120 Query: 107 GNLQVPRVELARCADGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 GNL+V R +C D L K+ + L L GL + +FTR++LL+Q + AFL AK Sbjct: 121 GNLKVDRY--VKCLDDDTTLTQKISEVTPLIEKLVGLSFEQFTRAVLLAQSEVGAFLKAK 178 Query: 166 PKERAELLEELTGTEIYGQIS---AMVFEQHKSARTELEKL 203 ERA+LLE LT ++I+ +S A F + K+ R +LEKL Sbjct: 179 DNERADLLEYLTNSQIFSLVSQKAAEKFSEVKNKRNDLEKL 219 >UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW9_9FLAO Length = 1007 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 130/396 (32%), Positives = 202/396 (51%), Gaps = 35/396 (8%) Query: 669 TRQ--QEAQSWQQRQNELTALQNRIQQLTPILE-------------TLPQSDELPHCEET 713 TRQ + ++++Q + EL ALQ+ I L +L+ +L + D+L T Sbjct: 622 TRQTIENYKAFKQYKVELKALQSSISILEELLDIQKEGKSISEKMKSLYKGDDLGRLV-T 680 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 ++W Q+H + ++ S + +L + Q + L+ F + A+ Sbjct: 681 SYTKSWNQLHTELKSVSSSLDKQTSDKAVLNNNLSQLQQGLKSMLEGKGFANIAEANASR 740 Query: 774 MDEQTLTQL----EQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 M +L + +N++ + + + L Q H + +A ++ I+ Sbjct: 741 MKSSNYNELLLRKSDIVKNIKVKEEKLEGLENQLKSLEFVHFTEKDKTEIA----IDNIK 796 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 L T +KL + I++ L +N + +T+ I ++ + + W LN LIG Sbjct: 797 VTLNSTREKLED-------IKRVLNNQKENLTEYKTIQDSIIEVQKANKKWEVLNRLIGD 849 Query: 890 KEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR--KASEALEVEVVDTWQADAVRD 947 G +F KFAQ L+L L+ L N++L +L+ RY L R + ++ V+D R Sbjct: 850 ATGTEFNKFAQDLSLQRLILLGNKRLNQLNDRYELDRFIAGEDKNQLYVIDNHMGGLRRS 909 Query: 948 TRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA- 1006 +TLSGGE+FL+SLALAL LSDL S I+SLF+DEGFGTLD ETLD LD L+ L A Sbjct: 910 VKTLSGGETFLMSLALALGLSDLASKNVEINSLFIDEGFGTLDPETLDLTLDTLERLQAE 969 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 S KTIG+ISHV A+KERI QI + + N GYS+LE Sbjct: 970 SNKTIGIISHVNALKERIQTQIVLNR-NTQGYSQLE 1004 >UniRef50_C9LH68 Exonuclease SbcC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LH68_9BACT Length = 1252 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/272 (38%), Positives = 146/272 (53%), Gaps = 25/272 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI + L NL S +G IDFT EP S GLFAITG TGAGK+TLLDAICLALY PR Sbjct: 1 MKIDKVTLNNLTSFEGLQTIDFTTEPLRSAGLFAITGDTGAGKSTLLDAICLALYGRAPR 60 Query: 61 LSNVSQSQN------------------DLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRA 101 L V + + ++M R E A VEF G Y A WS Sbjct: 61 LDGVEKMNSEALATDSTVKGIQTDDVRNIMRRGQKEASALVEFSTPDGARYEAEWS---C 117 Query: 102 RNQPDGNLQVPRVELARCADGKILADKVKDKL-ELTATLTGLDYGRFTRSMLLSQGQFAA 160 R + GN + A K D ++ E + GLDY +F+R+++L+Q FA+ Sbjct: 118 RKKRTGNYDTVARSFRQIAPKKKSFDGRNAEIQEEINRVVGLDYMQFSRTVMLAQNSFAS 177 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV--TLLTPEQV 218 FL A +E++ LLE+LTGTEIYG+IS + E+ +A ++ ++ G+ LTPE++ Sbjct: 178 FLKACKEEKSALLEKLTGTEIYGRISMRIHEKAAAATARVKTEESHIEGILHNRLTPEEL 237 Query: 219 QSLTASLQVLTDEEKQLITAQQQEQQSLNWLT 250 + L + LT EKQL + Q+ + +NWL Sbjct: 238 EDLETDVNRLTLSEKQLCSEQEMVKSQINWLV 269 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 4/174 (2%) Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY-LLQRKA 928 + Q+ + +WG L+ L+GS G KFR+ AQ T LV AN L+ L RY L+ Sbjct: 1078 LRQLEEDATEWGRLDDLLGSSTGKKFRELAQSYTFRLLVAQANHHLSHLSARYRLVNIPG 1137 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGT 988 + LE+E D + D R +LSGGE+F+V LALAL L+ L +H I SLF+DEGFG Sbjct: 1138 TLTLEIEDRDMF--DERRYVSSLSGGETFVVCLALALGLASLSAHNLSIGSLFIDEGFGN 1195 Query: 989 LDSETLDTALDALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD +L+ ++AL L G+ +GVISH + ++ +I QI+V+K+ G S++ Sbjct: 1196 LDQASLNLVMEALSNLETIEGRKVGVISHTDQIRRQISPQIQVRKLPVGGRSEI 1249 >UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLA0_9FLAO Length = 1007 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 131/210 (62%), Gaps = 7/210 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL + KN+NSL+GE++IDFT+EPF N LFAITGPTG+GKTT+LD I LAL++ PR Sbjct: 1 MKILKIAFKNINSLRGEYEIDFTQEPFLQNSLFAITGPTGSGKTTILDVISLALFNHVPR 60 Query: 61 LSNVSQSQ----NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 L +S ++ ++TR+ + A++ ++ + + W + RN GNL+ +EL Sbjct: 61 LGKMSTNEVLKKGAILTRNQEDANAQITYQCNQGIFTSRWEISTNRN---GNLRDYHMEL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 +IL K D L GL+Y +F +S++L+QG+FA FL KER LLE++ Sbjct: 118 INTVSNEILDLKKSDVPGKNEELIGLNYDQFIKSVVLAQGEFAKFLQVPKKERGALLEKI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQ 206 TGT+IY +I VF ++K E++ +A+ Sbjct: 178 TGTDIYRRIGIEVFLRNKERAKEIDAKRAK 207 >UniRef50_Q1NCK9 Exonuclease SbcC n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCK9_9SPHN Length = 1235 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/321 (33%), Positives = 168/321 (52%), Gaps = 24/321 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L++R +NL SL G++++DF EP + G+FAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MRVLAIRGRNLASLHGDFEVDFEAEPLSDAGIFAITGPTGAGKSTLLDAMCLALFDAVPR 60 Query: 61 L------SNVSQSQND---------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQ 104 L + + Q D ++ + E AE++F + GE YRA W+ RA + Sbjct: 61 LGAAPARARIETVQGDELSAGDPRAVLRHGSGEGYAELDFVGRDGERYRARWTVQRAHKR 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 DG +Q R L R ADG+IL + L L GL +F R++LL+QG F AF+ A Sbjct: 121 ADGRMQGTRHSLTRLADGEILGGTKTETLAEIHRLVGLSAEQFRRAVLLAQGDFEAFIKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTE----LEKLQAQASGVTLLTPEQVQS 220 ERA+LLE LTG+ IY + E+ + R + L++++AQ L E ++ Sbjct: 181 DDNERAQLLERLTGSHIYASLGRAAHEKAATLRAQQQAILDRIEAQNG----LDDEARRT 236 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 D + + + +++ W T + L + + + A+ A A E+A P+ Sbjct: 237 AEEQQIAAKDAADRTSSTLGELSKAVRWETERATLANKVTECELAVSTANAAREEAAPRH 296 Query: 281 AALSLAQPARNLRPHWERIAE 301 L L + A L W + E Sbjct: 297 EILRLRKAAFALAGDWTAVQE 317 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/260 (39%), Positives = 149/260 (57%), Gaps = 17/260 (6%) Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD--GLALTVTVEQIQQELAQ 834 +TLT +++ +N A L+ Q E L H Q P D G AL + + +Q Sbjct: 978 ETLTAIDRAFEN-------AAALLAQRQEDLIHHDQTDPPDLSGDALVQAISEAKQADEA 1030 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 + L++ L++D + R Q L ++ + W L+ LIG G + Sbjct: 1031 AQKALQDAQFV-------LRRDDEVRTQTTKLRAELERERTAARVWLALDELIGDATGAR 1083 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 FR+FAQGLTLD L+ AN +LT L RY LQR S + ++V+D A +R LSGG Sbjct: 1084 FRRFAQGLTLDRLLAHANSRLTDLKPRYELQRAPSGDMLIQVIDHDMAGEIRGVHNLSGG 1143 Query: 955 ESFLVSLALALALSDLVSHKT-RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 E FL+SLALAL L+++ + + +I+SLF+DEGFG LD +L AL L+ L+A+G+ +GV Sbjct: 1144 ERFLISLALALGLAEMSTGRGLKIESLFIDEGFGALDGGSLGQALSVLEHLHATGRRVGV 1203 Query: 1014 ISHVEAMKERIPVQIKVKKI 1033 ISHVE +KERIPV+I+V + Sbjct: 1204 ISHVEEIKERIPVKIEVTPV 1223 >UniRef50_Q6IEE1 SbcC exonuclease n=7 Tax=Bacteria RepID=Q6IEE1_BRAJA Length = 1261 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 24/253 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R ++L SL ++ID EP A +GLFAITG TGAGK+T+LDA+CLALY E PR Sbjct: 1 MRILAIRGESLASLGAPFEIDLAAEPLAGSGLFAITGETGAGKSTILDALCLALYGEYPR 60 Query: 61 LSNVSQSQND---------------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQ 104 +S V + +N ++ R AEV+F + GE YR W NRAR + Sbjct: 61 VS-VGRRENAPDPSGEGISIHDGRAILRRGAGSGYAEVDFVGQDGERYRVRWEANRARGR 119 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G LQ + L R DG +A E T L + +F R++LL+QG+F AFL A Sbjct: 120 ANGRLQNEQRSLYRLDDGSAVATGKTQVREAVGRRTDLTFDQFRRTVLLAQGEFDAFLLA 179 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ERAELLE++TGTEIY IS V + + R +E+L+ + + LL E + Sbjct: 180 AESERAELLEKITGTEIYAAISVRVHDGTDARRRSVEQLERRRDDIGLLDDE-------A 232 Query: 225 LQVLTDEEKQLIT 237 Q L DE+ QL + Sbjct: 233 RQALLDEQSQLAS 245 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/233 (43%), Positives = 144/233 (61%), Gaps = 1/233 (0%) Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 Q+ +R +G T VE++ +A ++ + G + L +D + R+ L Sbjct: 1013 QNDLNRALEGFNETTDVEELAAVVATLGTEIGDMQQLTGGLAATLARDDEARRAAANLSA 1072 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKA 928 QI ++ W ++ IGS GD+FR+F QG+TLD++V LAN L L RY L R A Sbjct: 1073 QIETAKAELVIWHAVDDAIGSASGDRFRRFVQGITLDHMVQLANDHLHALTPRYRLARGA 1132 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGT 988 + L + ++D D VR TR+LSGGE FLVSLALALALS L + +D+LF+DEGFG+ Sbjct: 1133 ASDLTLHIIDRDMGDEVRGTRSLSGGERFLVSLALALALSGLEGRSSFVDTLFIDEGFGS 1192 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD+ETLD A+DAL+ L G+ +GVI+HV AM ERI VQ++V+K G G S++ Sbjct: 1193 LDAETLDLAVDALETLQGRGQKVGVITHVAAMIERIAVQVRVEK-RGAGRSEI 1244 >UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteobacteria RepID=A0YBB3_9GAMM Length = 1019 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 294/1135 (25%), Positives = 490/1135 (43%), Gaps = 234/1135 (20%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET-- 58 MK LSL L+ G+ +DF SN LF I G TGAGK+++LDAIC ALY +T Sbjct: 1 MKPLSLTLQAFGPFAGKESLDFA--ALGSNPLFLINGATGAGKSSILDAICFALYGQTTG 58 Query: 59 ----PRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--FWSQNRARNQPDG-NLQV 111 P S+ L+T +EF + + YR QN+ + +G Sbjct: 59 AERDPAQMRCDFSEPSLLTE------VNLEFALGTKHYRVRRVPQQNKPKTHGEGITNHA 112 Query: 112 PRV---ELARCADGKIL-ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPK 167 P EL DG +L + KV D + L GLD +F + M+L QG+F L A Sbjct: 113 PEAQFWELDGTKDGNLLVSKKVTDATQAIKELIGLDVEQFRQVMVLPQGKFRELLLADSS 172 Query: 168 ERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV----------------T 211 +R ++ +L IY +I + + + +E Q Q G+ Sbjct: 173 DRQKIFSQLFQASIYKRIEESLKSRASGIKQAVENHQNQIRGILQAAEVNTENEVANSLA 232 Query: 212 LLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLT-RQDELQQEASRRQQALQQAL 270 L PE L+ +L V T E + ++ ++Q+ WL R DE S +Q+ L + + Sbjct: 233 TLAPE----LSVALDVRTKAEAEKKASETAKEQA-EWLVNRLDEF----SYKQKQLAEYV 283 Query: 271 AEEEKAQPQLAALSLAQPARNLRPHWERI-AEHSA------ALAHIRQQIEEVNTRLQST 323 +E + L A AR ++P + + AE + ALA Q ++ R Q T Sbjct: 284 EQESVINAKQQKLDKAINARAVKPMFASMQAEEGSLDSLEKALASSADQWKQAELR-QVT 342 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 ++ AK+ EL +QQ +L Q +Q + L+ Sbjct: 343 SVQAFNLAKTNAKELGELTKQQLTLE---------------------QLEKQYHE---LQ 378 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q Q +LT A++ LNA + L Q+ +Q+ L+ ++ ++ Sbjct: 379 QAQGRLTIADEDLNASKMV------------LTQNQQQQ------ATLNNELEVAEQSNQ 420 Query: 444 QLQVAIQNVTQEQ---TQRNAALNEMRQR--YKEKTQQLADVKTICEQEARIK------- 491 LQ ++N+ +Q +Q + L E RQ ++ + A+ + IC+Q+ R+ Sbjct: 421 TLQGELENLAGQQILLSQLDTQLAERRQLEISRDLETERAESEIICQQDYRVAQESFKQA 480 Query: 492 TLEAQRAQL--QAGQ------------PCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + A++ ++ AGQ PCP+CGS HP+ P + S L ++ Sbjct: 481 EVSAKKTEMSWHAGQAALLSRELKHDEPCPVCGSVEHPS--------PAADNSELTD-KS 531 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 V K T R +D N + L ALTQ +A L I L PL Sbjct: 532 AVDKARAVAETARRVMD----------NSREGLDTAASALTQT-RAERERLAILLGPLAS 580 Query: 598 IQPWLDAQDEH----------------ERQLR-----------LLSQRHE-LQGQIAAHN 629 +P Q +H +RQL+ LL++ E L G+++ HN Sbjct: 581 -EPLAVLQAKHSANVEALNTLLAKQDLQRQLQARLAVIKAEQVLLTKTLETLAGEVSEHN 639 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 +++++ + ++Q LL+ L+ L + D LA E+ Sbjct: 640 EKVVRIRAGVDQ----LLSVLSQ---VLHKPDAITEQLA--------------EVALHMR 678 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 R+ Q + E Q+D C++ +Q L++Q + A+ + Sbjct: 679 RLSQTLEVAEK-AQADTRSECDKAA----------------AQHAALEKQLIEQAKQTSE 721 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 A A + AL S+F F A++ E QLE LK +E R + + + A Sbjct: 722 ATAAWHEALADSLFVTVDDFRLAVLAENE--QLE-LKLTIEGYRTELSAIKGAVQQIQAD 778 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + D +A+ + + + EL ++ L ++ + ++ + ++ L++ Sbjct: 779 IAERTRPDLIAIEAALNE-KNELYKSADTLWRTLEARSNQLKDIQVKLERAHEKNELLEA 837 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR 926 ++T G L+ + + G+K ++F + LD+++ A+Q+L + GRY L R Sbjct: 838 EYKIT------GTLSDVANGQTGNKISLQRFVLSVLLDDVLIQASQRLNLMSKGRYQLVR 891 Query: 927 KASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTR 976 K A LE+EV D++ R TLSGGESFL +L+LAL LSD+V + + Sbjct: 892 KEDRAKGNKASGLELEVEDSYSGK-TRSVATLSGGESFLAALSLALGLSDVVQSYAGGIK 950 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 +D+LF+DEGFG+LD E+LD A+ L L ASG+ IG+ISHV +KE++ +++ V+ Sbjct: 951 LDALFIDEGFGSLDPESLDLAVRTLIDLQASGRMIGIISHVTELKEQMALRVDVE 1005 >UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 Tax=Veillonella RepID=D1BNU5_VEIPT Length = 1027 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 276/1123 (24%), Positives = 468/1123 (41%), Gaps = 203/1123 (18%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL ++ + +DF + +F I GPTGAGKT++LDA+ ALY E Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNE--LQDHSMFLIAGPTGAGKTSILDAMVYALYGE--- 55 Query: 61 LSNVSQSQNDLMTRDTAEC--LAEVEFEVK-GEA-YRA------FWSQNRARNQPDGNLQ 110 + + D + D AE + V+F G+A YR ++ R + N Sbjct: 56 -PSGEVRKTDAIRSDFAEPHRMTRVDFSFAIGDAQYRVERLPKQMVAKKRGTGMREQNAS 114 Query: 111 VPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 E + + K++A + + G +F + +LL QG+F L A ER Sbjct: 115 ATVYE-RKNGEWKVIATSAAAIRDTIQQIIGFRKDQFLQVVLLPQGEFRKLLVASTSERE 173 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT- 229 ELL L TE+Y ++ + + A+ +E E + T +Q + Sbjct: 174 ELLHTLFRTELYRKLQETLKAAYDEAKAGIE--------------ENLTKQTVFMQSIPH 219 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 D ++T + + N +D L E A+++ + Sbjct: 220 DGATPMVTIEHVRELLANRGPHRDALAVERDE--------------------AVTVVEQF 259 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIR--------HHAAKQSAEL 341 LR W + +LA +++ V TR + L ++ H KQ E Sbjct: 260 NVLRNQWSLYNQAQQSLAEATSKLDLVKTRETERVNLSEKVQFLNSLAPTHELYKQYIEK 319 Query: 342 QQQQQSLNTWLQE-HDRFRQWNNEPA-------GWRAQFSQQTSDREHLRQWQQQ----- 388 Q ++L L + +R + A G Q + R L Q+QQQ Sbjct: 320 QAVLKTLEQALSDAEERVKLATQHEAKCLEVYSGLEGQAESIQAKRTTLAQFQQQAEKFD 379 Query: 389 -LTHAEQKLNALAAITLTLTADEVATALAQHAE-QRPLRQHLVALHGQIVPQQKRLAQLQ 446 L ++K + L + L + + ALA+ E + L L AL Q+ K L Sbjct: 380 ELDVLKKKFSTLHSSLEELDSKKSEDALAKQRELVKTLEADLEALRKQVQDNNKFLENTP 439 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV-KTICEQEARIKTLE--AQRAQ---- 499 + QEQ LN++ RY E ++++ V K I ++ R+ +L+ Q A+ Sbjct: 440 I-----IQEQ------LNDL-HRYSELLEEISKVQKEIDDKGQRLASLDRTVQVAKVHLE 487 Query: 500 -----LQAG------------QPCPLCGSTSHPAVEAYQALEPGVNQ------SRLLALE 536 +Q G +PCP+CGST HP + A + P ++ +R +AL+ Sbjct: 488 RLEHLMQEGRAFELVHLVVDNEPCPVCGSTDHPRLAAKPEIYPTKDEIEEARIARDIALQ 547 Query: 537 NEVKKLGEEGATLRGQLDAITKQ---------LQRDENEAQSLRQDEQALTQQWQAVTAS 587 + ++G++ TL +LD +TKQ L D+ ++ +Q L + + +TA Sbjct: 548 KQASEVGQQ-KTLVTRLDELTKQVDAQVSTLKLSMDDFSEKNFASVQQDLLAKMEQLTA- 605 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 L+ ++ A EH L R +L AHN+ +++ +E R + Sbjct: 606 ----LRGKSELLSKTIAHKEH----NLKVARDKLATLEIAHNE-LLKNLHDLEIRISSVQ 656 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + + TLP D +WQ+ QL + + DE Sbjct: 657 ANIDALSKTLPTTD------------IAAWQK-------------QLESLDSEITIYDEQ 691 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA-SVFDDQ 766 +T N EQ A + +TL Q ++L + +LQ S+ +D Sbjct: 692 VKVGKT----NLDAAREQLNAKRGRLETLSSQVKEETKNLNLMYKNYTKSLQTISLAEDD 747 Query: 767 QAFLAALMD----EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F+ AL D E TQL L + N+ R + +ET+ +P D ++ Sbjct: 748 --FVEALRDIKEIETYRTQLHALDEAF-NKARAVYDAALKASETVV-----KPSDTVS-- 797 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 ++I + L N + ++ K +TL + + ++V+ Sbjct: 798 ---DEIYATAVEHRDTLVGNLAAWD---KETKHIETTLNSLETLEAAMGEAREKVKFLSR 851 Query: 883 LNSLI-GSKEGDK---FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASE 930 LN L G ++G K F ++ G LD +V+ AN +L ++ RY L+R + + Sbjct: 852 LNDLANGGEQGFKNVTFERYVLGAILDEVVYAANLRLQKMSRNRYSLERSDYTGGGRGKQ 911 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 L++ V+D + + R TLSGGE+FL S+ALAL L+D++ + +D++F+DEGFG Sbjct: 912 GLDLAVMDAFTGQS-RPANTLSGGETFLASMALALGLADVIQSYAGGIHMDTMFIDEGFG 970 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 TLD +TL+ A++ L L +SG+ IG+ISHV +K RIP ++V Sbjct: 971 TLDPDTLELAMETLVQLQSSGRLIGMISHVPELKSRIPAHLEV 1013 >UniRef50_B6QZR1 Exonuclease SbcC n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR1_9RHOB Length = 1249 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 147/215 (68%), Gaps = 2/215 (0%) Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 ++ +L T Q E +G + ++L+ DA+ R++ Q +M + + + + WG ++ Sbjct: 1029 ELSSQLEATKQAFSELQVKRGVLSEKLRVDAEAREKAQQIMGLLLEAKETAKTWGAISEA 1088 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 IGS +G KF+K AQG+TLD LV LAN+QL +L RY L+R A L + V+D D R Sbjct: 1089 IGSADGSKFQKVAQGVTLDLLVELANKQLHQLKPRYQLKR-ADFGLGLFVIDRDMGDTPR 1147 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 TR+LSGGE FL+SL+LALALS L ++ +D+LF+DEGFG+LD+E+LD A+DAL+ L Sbjct: 1148 STRSLSGGERFLISLSLALALSGLEGRQSFVDTLFIDEGFGSLDAESLDLAIDALEMLQG 1207 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 G+ +GVISHVEA+K+RIPVQ++V + G G S++ Sbjct: 1208 QGRKVGVISHVEALKDRIPVQVQVVR-QGAGRSRV 1241 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 115/321 (35%), Positives = 163/321 (50%), Gaps = 38/321 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R +NL SL ++ID +EP GLFAITG TGAGK+TLLDA+CLAL+ + PR Sbjct: 1 MRILAVRGENLASLAAPFEIDLEQEPLDGAGLFAITGETGAGKSTLLDALCLALFGQCPR 60 Query: 61 LSNVSQSQN-------DL--------MTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQ 104 LS S + DL +TR A AE +F G YRA W+ RARN+ Sbjct: 61 LSAAGSSDSVPDVAGADLKETNPRTVLTRGAASGFAEADFIGADGTGYRARWTVRRARNK 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G LQ L R D + +K GL Y +F R++LL+QG F AFL A Sbjct: 121 ASGRLQNVERSLVRIEDNAAVESGIKQVDAAVEERLGLTYDQFKRTVLLAQGDFDAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ERA LLE++TGT+ Y IS +F++ A+ + KL+ ++ L Sbjct: 181 NDNERAALLEKVTGTQRYRDISKQIFQRFSEAKDAVGKLEEKSDVAGL------------ 228 Query: 225 LQVLTDEEKQLITAQQQ--EQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 L DEE+ + +Q E+QS + + D + + Q+ L +A + A + A Sbjct: 229 ---LEDEERTALVGEQSELEKQSASVQSDMDAIAKSLGHLQK-LDEAKTKLASAHDEFVA 284 Query: 283 LSL----AQPARNLRPHWERI 299 L AQ R+L+ +ERI Sbjct: 285 LKARHENAQAKRDLKAQFERI 305 >UniRef50_C4L7Q2 SMC domain protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7Q2_TOLAT Length = 1253 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 94/162 (58%), Positives = 116/162 (71%), Gaps = 1/162 (0%) Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W L+ LIGS G KFR FAQ LTL+ L+ LAN L L RY LQR L ++V+D Sbjct: 1090 WQQLSDLIGSANGAKFRTFAQSLTLEQLLGLANHHLAELAPRYQLQRVPGTDLALQVIDR 1149 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 D +R +LSGGESFLVSLALAL LS L SH TRI+SLF+DEGFGTLD E+LDTA+ Sbjct: 1150 DMGDDIRAVESLSGGESFLVSLALALGLSSLSSHDTRIESLFIDEGFGTLDPESLDTAIA 1209 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +LDAL A+G+ +GVISHV+ + ERI VQIKV+ + G G S++ Sbjct: 1210 SLDALQAAGRQVGVISHVQTLVERIGVQIKVQSLGG-GESRI 1250 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 135/248 (54%), Gaps = 19/248 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R +NL SL + IDF +GLFAITG TGAGK+T+LDAICLALY + R Sbjct: 1 MKILAVRGENLASLSHPFNIDFIHGRLGDSGLFAITGNTGAGKSTILDAICLALYDQIAR 60 Query: 61 LSNVSQSQ--------------ND---LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRAR 102 + ++ ND +++R AEV+F + G+ Y A WS RAR Sbjct: 61 FPSNKKNMAEIGRADDSERLKANDVRLILSRGAVSGYAEVDFTARDGQHYCARWSVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKI-LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAF 161 N+PDG Q L + ++G I A +D GL++ +F R+++L QG FAAF Sbjct: 121 NRPDGKCQKQERSLRQLSEGGITYAGGQRDVQSQIDEKIGLNWEQFRRAVILPQGDFAAF 180 Query: 162 LNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 L A ER+ LLE +TGTE Y +S +E+ K+ R +L L+ + + E ++ Sbjct: 181 LKASTDERSALLERMTGTEHYSALSMAAYERAKTERQQLAVLEEKLGDQPQFSQEDRDNI 240 Query: 222 TASLQVLT 229 + LQ L+ Sbjct: 241 QSQLQALS 248 >UniRef50_Q1VUD1 ATPase involved in DNA repair n=2 Tax=Flavobacteriaceae RepID=Q1VUD1_9FLAO Length = 1217 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 87/197 (44%), Positives = 123/197 (62%), Gaps = 6/197 (3%) Query: 846 QGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLD 905 +GE+++ ++D + + + Q + +QI W L +IG+ + D F + Q LTL Sbjct: 1017 KGEVKEAFRKDQEIKDRNQEVYKQIEAQDAICNVWRELFKIIGNSK-DAFNVYVQRLTLK 1075 Query: 906 NLVHLANQQLTRLHGRYLLQ----RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL 961 +L+ LAN L +L+ RY L+ K E L ++D +Q D R T SGGE F++SL Sbjct: 1076 HLLDLANVHLYKLNKRYSLKMEEVYKPKEELNFNLIDHYQTDQARLVDTSSGGEKFIISL 1135 Query: 962 ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 ALAL LSDL S +IDSLF+DEGFGTLD +TL+T + L+ L + GK IG+ISHVE +K Sbjct: 1136 ALALGLSDLASKNVKIDSLFIDEGFGTLDKDTLETVISTLETLQSDGKMIGIISHVENLK 1195 Query: 1022 ERIPVQIKV-KKINGLG 1037 ERIP QI + KK NG+ Sbjct: 1196 ERIPTQIMINKKSNGVS 1212 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 163/310 (52%), Gaps = 18/310 (5%) Query: 1 MKILSLRLKNLNSLKGE--WKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET 58 MKIL + L+NLNSLK + IDF E F GL+AITG TGAGKTT+LDAI +ALYH Sbjct: 1 MKILKIELQNLNSLKSDSPIVIDFENELFKDVGLYAITGSTGAGKTTILDAITIALYHNV 60 Query: 59 PRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVE 115 PR +N + D+++ + + V FE + Y A+W A G L V V Sbjct: 61 PRFNNSKGTLLDVVSHGATDAFSRVTFENENTIYEAYWGMRLA--SKSGKLLVNPQEEVS 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 L IL+ + + E +T LDY +F RS++L+QG+FA+FL AK E+ LLE+ Sbjct: 119 LKNLTSNTILSSQKRAVSEDVIRVTQLDYDQFLRSVMLAQGEFASFLTAKGPEKGRLLEQ 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT----DE 231 +TG EIY +I + ++ L +++++ + +L+ E+ LT + L + Sbjct: 179 ITGEEIYKKIGQAILDRKAKEENTLREIKSRINADDVLSEEEKIQLTTKNKELVVHILEA 238 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL---AQP 288 EK++ + Q +NW + EL E+ + + + + E E + + L L A+P Sbjct: 239 EKEMNSI----QTIVNWYLKSKELTHESEKLELDSRVVIIEFENHKAEFELLDLNEKAEP 294 Query: 289 ARNLRPHWER 298 + L ++ R Sbjct: 295 FKELIQNFNR 304 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 483 ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS 530 I E E I E R L AGQPC LCGS HP E +++ GV++S Sbjct: 576 IYELEKSISKYEDDRHNLFAGQPCGLCGSKEHPFTEHLESV--GVSKS 621 >UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB10_9GAMM Length = 968 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 77/156 (49%), Positives = 105/156 (67%) Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W L+ LIG+ +G K+R +AQ LT +++ AN+QL +L RYLL + LE+ ++D Sbjct: 799 WQNLHELIGAADGKKYRNYAQSLTFASVIAQANRQLVQLSDRYLLTADPARPLELNIIDN 858 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 +Q R + LSGGESF+VSLALAL L+ + +ID+LFLDEGFGTLD ETLD+AL+ Sbjct: 859 YQGGETRSAKNLSGGESFIVSLALALGLAQMSGENMQIDTLFLDEGFGTLDEETLDSALE 918 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 L L GK IG+ISHV A+ ERI +I++ NG Sbjct: 919 TLAQLRTHGKHIGIISHVAALTERIATRIQITPQNG 954 >UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8J8_HYDS0 Length = 961 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 258/1089 (23%), Positives = 484/1089 (44%), Gaps = 177/1089 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ S K + +DF + LFAITG TGAGKTT++DAI ALY + PR Sbjct: 1 MRPLVLELEGFLSYKEKTVVDF-----SDLSLFAITGMTGAGKTTIIDAITFALYGKCPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S+ D +++ + F + + Y +N + ++ Sbjct: 56 FEK-GASKEDYISKGKDFFRVSLTFSLNDKTYTVGRYLKSGKN----------IVVSLKE 104 Query: 121 DGKILADKVKDKL--ELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK-PKERAELLEELT 177 +GK + + K+KL E + +DY FT+ ++L QG+FA F+ + P+ER E++ L+ Sbjct: 105 NGKEIITEEKNKLREERIKEILNMDYDTFTKVIVLPQGEFAKFIKPESPQERREIIMRLS 164 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + ++ + Q K + E++ + SLT I Sbjct: 165 NLDKIDKMRELAASQKKDLKNEIDSI----------------SLT-------------ID 195 Query: 238 AQQQEQQSLNWLTRQ-DELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + Q+++ L ++ D L+QE S + + L EKA+ + L L + Sbjct: 196 NLKSNQENVEELQKKLDSLEQELSVKTSEKKVLLERFEKAKKK---QELKNELSKLMIEY 252 Query: 297 ERIAEHSAALAHIRQQIEEVNTR--LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 E + + I+++IE + + L+S + +++ K + EL ++ + QE Sbjct: 253 ENLENQKEKMELIKKRIEFLKPKLSLKSDIERYIKLKNELEKTTLELDKKNKEYFLKEQE 312 Query: 355 HDRF-------------RQWNNEPA--GWR---------AQFSQQTSDREHLRQWQQQL- 389 +++ ++ E G++ + S T+D +R +QQL Sbjct: 313 YNKLLINFETIKADYEQTKYQEERVERGYKIISILENALSIESYITNDEARIRDLEQQLK 372 Query: 390 THAEQKLNALAAI--TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 T E+K LA I L+ +E A+ + E +L A+ Q+ ++K + + Sbjct: 373 TKKEEKSKLLAEIEHYENLSKEENKEAIEKDIE------NLTAIISQLELKEKEKDKKLL 426 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT--ICEQEARIKTLEAQRAQLQAGQP 505 + + +E N L + ++ + Q+L K + +KTL L+ Sbjct: 427 EQKKLMEEVDNINKELLKYKEEQRNLDQELNANKNNIVLYYSNMLKTL------LKENDI 480 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CP+CG H E L+ V + + +E+ K+ L+ + +A L++ Sbjct: 481 CPVCGGVYHEK-EHTTMLDIEVEEDIIKNIEDIKSKIALSEDRLKSKKEA----LEKLSE 535 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQP-LDDIQPWLDAQDEHERQL-RLLSQRHELQG 623 E +SL E+ L ++ TLQ L +++ + QD ++ L +L S++ +L+ Sbjct: 536 EIESL---EKELLEKE---------TLQSRLKELKQRREFQDNIQKNLEKLKSKKDKLEN 583 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLLT---TLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 +I N+Q ++ + +++ L T L Y + +E L Q + + Q Sbjct: 584 EILLLNKQKEGLEKDLYNKKESLKTLEKELLSYGV-------KEGHL---QNKKNAIDQY 633 Query: 681 QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 +N+L ++N IQ I E + + E++++L + EQ +L ++ T+ ++ Sbjct: 634 KNKLDEIRNEIQNKRKIYEDTKEM--INTYEKSIML-----LKEQVSSLSVKKSTISEE- 685 Query: 741 VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV 800 ++ + L+++ D++ + LE+L + LEN R + Sbjct: 686 ----------------------LNELETKLSSIEDKEKV--LEELNR-LENYERTYNEYM 720 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE--NTTSQ--GEIRQQLKQD 856 + + L + Q + ++ + +T E QEL + L E T +Q G I ++ Q Sbjct: 721 VKLS-NLKEQIQLKENE--IVNITEEAPPQELENMLEVLEEYVKTLNQEIGSISSKINQA 777 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 +N +Q + L + I + ++ + L + S D + + ++ LV AN + Sbjct: 778 KENEKQIKELEETIKDLEKKYNIYERLEQDLKS---DALQAYISQKIIEELVKYANVYAS 834 Query: 917 RLHGRYLL--QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK 974 ++ YL + K+ E + V D + R ++LSGGE+F+ SL ALALS+ V K Sbjct: 835 KMEFPYLFKVEEKSREKDSIVVEDAF--GNTRPIKSLSGGETFITSLCFALALSEAVGSK 892 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKI 1033 + SLF+DEGFGTLD ETL+ +AL+ L+ + K +G+I+HVE++ E+ P ++ V K Sbjct: 893 -HLKSLFIDEGFGTLDKETLEKVGNALELLSQNINKMVGIITHVESLAEKFPNRLIVTKT 951 Query: 1034 NGLGYSKLE 1042 G SK+E Sbjct: 952 KD-GSSKIE 959 >UniRef50_B1ZI73 SMC domain protein n=6 Tax=Alphaproteobacteria RepID=B1ZI73_METPB Length = 1248 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 137/242 (56%), Gaps = 23/242 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R +NL SL + +D EP + GLFAITG TGAGK+T+LDA+CLALY PR Sbjct: 1 MRILAIRGENLASLAAPFAVDLAAEPLGATGLFAITGETGAGKSTILDALCLALYGRYPR 60 Query: 61 LSNVSQ------------SQND---LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQ 104 ++ VS+ S +D ++ R AEV+F + G AYR W RARN+ Sbjct: 61 VA-VSRREDVPDPGGEALSASDGRAILRRGAGAGYAEVDFIGQDGIAYRVGWEAYRARNR 119 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G LQ R L R DG +A L LT L + +F R++LL+QG+F FL A Sbjct: 120 ATGKLQAERRRLHRLDDGSAVAAGKTQVLAAVERLTDLTFDQFRRTVLLAQGEFDTFLLA 179 Query: 165 KPKERAELLEELTGTEIYGQISAMV---FEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 ERAELLE++TGT IY +IS V +E+H+ A LE + + + LL E + S Sbjct: 180 AEGERAELLEKITGTAIYSEISKRVHLGYEEHRRAVAALEVRRGE---IGLLDAEGLASR 236 Query: 222 TA 223 +A Sbjct: 237 SA 238 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 89/160 (55%), Positives = 112/160 (70%), Gaps = 1/160 (0%) Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W + +GS GD+FR+FAQG+TLD+LVHLAN QL L RY L R A L + VVD Sbjct: 1078 WHRVEEAVGSAGGDRFRRFAQGVTLDHLVHLANDQLRALSPRYRLARSAGADLALHVVDG 1137 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 R TR+LSGGE FLVSLALALALS L ++ +D+LF+DEGFG+LD++TLD A+D Sbjct: 1138 DMGGERRATRSLSGGERFLVSLALALALSGLEGRQSFVDTLFIDEGFGSLDADTLDLAVD 1197 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 AL+ L G+ +GVI+HV M ERI VQI+V+K G G S Sbjct: 1198 ALETLQGRGRKVGVITHVAGMMERIAVQIRVEK-RGSGRS 1236 >UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B7F Length = 997 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/222 (45%), Positives = 144/222 (64%), Gaps = 1/222 (0%) Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 A T+ + I+ LA + E + G +Q+L QD NR + +++ Q ++ Sbjct: 770 APTLPLVGIEATLATLEPQHGEQSQQLGAAKQRLDQDNQNRATGEAKARELEQARKEATV 829 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W L++LIGS +G KFRKFAQ +T++ L+ AN +L L RY LQR ++ LE++VVD Sbjct: 830 WQQLDTLIGSADGKKFRKFAQSMTMELLLAHANAELASLAPRYALQRVKAQDLELQVVDR 889 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 D +R T +LSGGE+FLVSLALAL LS L S K RI+SLF+DEGFG+LD +TL+TAL Sbjct: 890 DMGDEIRSTSSLSGGETFLVSLALALGLSSLASEKVRIESLFIDEGFGSLDPKTLETALA 949 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD+L + G+ +G+ISHV + ERI VQ+ V++ G G S + Sbjct: 950 TLDSLQSVGRKVGLISHVPGLAERIGVQVLVER-QGQGASTV 990 >UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYF3_CHRSD Length = 1101 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/192 (45%), Positives = 120/192 (62%), Gaps = 2/192 (1%) Query: 853 LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLAN 912 L D R++QQ ++ + WG ++ LIGS +G FR+ AQ L+ L+ AN Sbjct: 910 LHDDDRRRERQQAGQAELEAARHEYRRWGRISELIGSADGKVFRRIAQAYNLEQLLEHAN 969 Query: 913 QQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 L L RY L R SE L + V+D D R +LSGGE+FLVSLALAL L+ + S Sbjct: 970 AHLQGLSRRYRLMRGGSE-LGLLVIDHDMGDERRSVHSLSGGETFLVSLALALGLASMAS 1028 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 + I+SLF+DEGFG+LD ++L A++ALD L A G+ +GVISHV+ M ERIPVQI+V+ Sbjct: 1029 GELTIESLFIDEGFGSLDPQSLALAMEALDGLQALGRRVGVISHVQEMHERIPVQIQVEP 1088 Query: 1033 I-NGLGYSKLES 1043 + NG ++L S Sbjct: 1089 LGNGTSRARLVS 1100 >UniRef50_Q1DDQ3 Nuclease SbcCD, C subunit n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDQ3_MYXXD Length = 1302 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 19/233 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+L++R NL S G++ ++ + P GLFAITG TGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MKVLAIRGSNLTSFAGDFALELDQPPLDRLGLFAITGATGAGKSTLLDALCLALFDRTPR 60 Query: 61 LSN-----VSQSQND------------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRAR 102 L V ++ D ++ R E AEV+F K G YRA WS RAR Sbjct: 61 LGGRGGAPVGRADEDEDARLSAYDVRGMLRRGAGEGYAEVDFLGKDGRRYRARWSVWRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 N+ +G + ++L G++ + L GL + +F RS LL+QG+FAAFL Sbjct: 121 NRAEGRFRPQEMQLMDVVTGQLTGRTKGEVLAAIQERLGLSFDQFRRSALLAQGEFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP 215 A ERAELLE +TGTE+Y ++S E++K+ + L K +AQ L P Sbjct: 181 KADASERAELLERMTGTEVYSRLSMAAHEKNKAEQESLAK-RAQGLAAIALMP 232 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 6/247 (2%) Query: 795 QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLK 854 QA ++ + +E A+H+ P +++ + E + ++ ++ + +L Sbjct: 1043 QATAVLAERSERRARHEDSGPP-----SLSEQDAGAECERLRAEVEARRHAEAALHARLV 1097 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 D R + + + + E W L LIGS +G +F+ FAQ LTLD L+ AN Sbjct: 1098 ADDTARARHGAEAAALEEGRRAAEVWKVLGDLIGSHDGKRFKVFAQSLTLDALLLHANAH 1157 Query: 915 LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK 974 L L RY L R L++++VD D VR +LSGGESFLVSLALAL L+ L S Sbjct: 1158 LRELARRYRLMRVPGHDLDLQIVDGDMGDEVRSVASLSGGESFLVSLALALGLASLSSET 1217 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 T++++LF+DEGFGTLD ETL+ AL LDAL A+G+ +G+ISHV M ERI VQ++V K Sbjct: 1218 TQVETLFIDEGFGTLDPETLEVALATLDALQATGRQVGIISHVSGMAERIGVQVRVVKQG 1277 Query: 1035 GLGYSKL 1041 G G S+L Sbjct: 1278 G-GRSRL 1283 >UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of recBC) n=15 Tax=Acinetobacter RepID=B0VTC7_ACIBS Length = 1198 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 157/268 (58%), Gaps = 23/268 (8%) Query: 786 KQNLENQRRQAQTLVTQTA-------ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 +Q++ N+ A+ L+++ + E L++H Q +PD T+ IQ +A K Sbjct: 940 EQDIRNRLNHAERLLSEVSSALKTMQEQLSEHLQTQPDIEYEKLFTL--IQDNIA----K 993 Query: 839 LRENTTSQGEIRQQLKQDADNRQQ----QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 L+ +Q E+R LK + QQ QQ +QI + Q+ W ++ LIG +G + Sbjct: 994 LK----AQLEVRDGLKLKLELHQQNLAKQQKYAEQIQNIQQEEHRWSRISGLIGDAKGKE 1049 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 FR +AQ LD LV ANQQL L RY L+R ++L + ++D R +LSGG Sbjct: 1050 FRDYAQQYHLDILVEHANQQLAMLSQRYTLKR-LDQSLSLAIIDHDMDGETRSVASLSGG 1108 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 ESFL +LAL+LA++++ S +I+SLF+DEGFGTLD+ +L ++ALD L G+ + +I Sbjct: 1109 ESFLTALALSLAIANMASGSMKIESLFIDEGFGTLDASSLHMVMNALDQLQNQGRQVILI 1168 Query: 1015 SHVEAMKERIPVQIKVKKINGLGYSKLE 1042 SH++ M ERIPVQI+VK + G G S +E Sbjct: 1169 SHIQEMHERIPVQIQVKPL-GAGASTIE 1195 >UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXJ7_9BACE Length = 1144 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 185/638 (28%), Positives = 313/638 (49%), Gaps = 91/638 (14%) Query: 465 EMRQRYKEKTQQLADVKTI-CEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA---- 519 E+ ++ KE+ QQ+ D + + CE AR EA RA+L G CP+CG +++ Sbjct: 515 EVCRKEKEEVQQVYDKQRMSCEDWAR----EA-RARLSKGDVCPVCGKEVGDDLKSEAHF 569 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR-DENEAQ---------- 568 LEP + AL E + EE T + +A + L R +E EA+ Sbjct: 570 VSLLEP------VRALLEEKARRVEEVLTALARAEAEVRSLMRLEEMEAKKETAAKEAYF 623 Query: 569 -------------SLRQDEQALTQQWQAVTASLNITLQPLDDIQP-WLDAQDEHERQLRL 614 ++++ ++ ++Q QA+TA L + D ++ W A++ +R RL Sbjct: 624 LAEKAVADMPLYATVKEADEVVSQVEQALTAQLEVC----DRLEAQWKQAEEGQQRLNRL 679 Query: 615 LSQRHELQGQIAAHNQQIIQYQQ---QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ 671 +R EL ++++ + + ++E ++L L+ ALT+ Q E+ L Sbjct: 680 TKEREELTTASEQWHRKVEEADKAVSRLETELRMLEEALSREALTVSQCVEKGEILIVFT 739 Query: 672 QEAQSWQ-QRQNELTAL----------QNRIQQLTPILETL-PQSDELPHCEETVV--LE 717 ++W+ R+N +TAL Q R +QL+ +E+L Q +++ ++++ L Sbjct: 740 PWQEAWKTDRENFITALKKETNRYVEQQTRREQLSHKVESLASQVEQVQSVRQSILSELP 799 Query: 718 NWRQVHEQCLALHSQQQTLQQQ------DVL----AAQSLQKAQAQFDTALQASVF---D 764 W Q + + + L Q VL A ++ QK + + ++A + + Sbjct: 800 AWGQATAETIPDGPCPEGLPGQWNALNTSVLSVCHAIKTSQKLREEKSAGVEAFLVGHPE 859 Query: 765 DQQAFLAAL--MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + +L L ++ + + + Q L+N + + + LAQH+ RP + +T Sbjct: 860 ISREYLEKLAGLEVEKVNMARRTLQKLDNDLTSRRAEMERVGRELAQHRAQRPSETEGMT 919 Query: 823 V-TVEQIQQELAQTHQKLRENTTSQ----GEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + TVE+ T +L E T + G I Q L + Q+ + + +QI ++V Sbjct: 920 LATVEE-------TISRLEEQQTGKLARLGAIAQMLAHHEECLQRIRKVKEQIEVKQKEV 972 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVV 937 ++W + +L GS +G KFR AQ L L+ AN L+RL RY ++ L + + Sbjct: 973 DNWAGVAALFGSADGKKFRNIAQSYVLRQLLAGANHYLSRLTDRYRMECPPG-GLTILLR 1031 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTA 997 D +Q R T T+SGGESFLVSLALAL LS L +D LF+DEGFGTLDS+ L+T Sbjct: 1032 DEYQGGVKRPTSTISGGESFLVSLALALGLSSLNRKSLSVDVLFIDEGFGTLDSDYLNTV 1091 Query: 998 LDALDALN-ASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 ++AL+ L+ GK +G+ISHVEA++ERI QI V+++N Sbjct: 1092 MEALEKLHQIGGKKVGIISHVEALRERIATQIHVERVN 1129 >UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_AERHH Length = 1251 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 174/528 (32%), Positives = 248/528 (46%), Gaps = 76/528 (14%) Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 +ALE EVK +GE+ TLR +L+ +L DEQ Q W+ S Sbjct: 777 IALEGEVKAMGEQETTLRQRLEQGGSRL------------DEQMGGQPWRQWLGSQQWH- 823 Query: 593 QPLDDIQPWLDAQDEHER--------QLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 + + WL Q E ER L +Q LQ Q ++ Y++ +QRQ Sbjct: 824 EWQRACEAWLHGQSEWERLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQG 883 Query: 645 LLLTTLTGYALTLPQED---EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L+ T A L E+ E W QQ A + Q AL+ R +L L L Sbjct: 884 LV----TSRATCLGGEEIAQVEIRWQQRLQQLASELETMQGAARALRERQTELKTRLSHL 939 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD-TALQA 760 Q ++ VL W H L + A++D L A Sbjct: 940 EQEKQVSSRRRREVLGRW-AAHASSLGI----------------------AEYDLRRLLA 976 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA-------QHQQH 813 D+ +A AAL Q LE+ R +A+T +T+ LA ++++H Sbjct: 977 MSPDELKARRAAL-------------QALEDARAEARTRLTERQRALALEESKRDRYREH 1023 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 P+ LA + +++ L R + + L Q + +L +++A Sbjct: 1024 HPE--LA-ALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGSLQEELAAQ 1080 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + W L LIGS G K R FAQ LTL+ L+ AN QL L RY L+R L Sbjct: 1081 QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA 1140 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 ++VVD D VR +LSGGESFLVSLALALALS L S +T+++SLF+DEGFGTLD ++ Sbjct: 1141 LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS 1200 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD AL +LD+L A+G+ IGVISHV+ + ERI VQ++V+ + G G S++ Sbjct: 1201 LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGG-GESRV 1247 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 129/223 (57%), Gaps = 21/223 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NL SL G++ IDF + GLFAITG TGAGK+TLLDAICLALY E PR Sbjct: 1 MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR 60 Query: 61 L----SNVSQ----------SQND---LMTRDTAECLAEVEFE-VKGEAYRAFWSQNRAR 102 NV++ ND +++R A AEV+F G + A W+ RAR Sbjct: 61 FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 N+ +G Q L A G++ + ++ + L GL + +F R+++L QG+FAAFL Sbjct: 121 NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQA 205 + ER+ LLE +TGTE+Y SA+ + H+ AR E +KL A Sbjct: 181 KSSADERSALLERMTGTELY---SAISIQTHERAREEQQKLAA 220 >UniRef50_UPI000191346C exonuclease subunit SbcC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. M223 RepID=UPI000191346C Length = 79 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/79 (100%), Positives = 79/79 (100%) Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ Sbjct: 1 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 60 Query: 682 NELTALQNRIQQLTPILET 700 NELTALQNRIQQLTPILET Sbjct: 61 NELTALQNRIQQLTPILET 79 >UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroides RepID=A6KXN2_BACV8 Length = 1027 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/164 (53%), Positives = 111/164 (67%), Gaps = 2/164 (1%) Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVV 937 E+W LN L GS+ G KF++ AQG TLD L+ AN+ L L RY LQR + L +++V Sbjct: 860 ENWAKLNELFGSQTGAKFKEIAQGYTLDVLLLYANRHLQDLAPRYELQR-IPDTLALQIV 918 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTA 997 D VR +LSGGESFLVSLALAL LS L S++ ++SLF+DEGFG+LD +TL A Sbjct: 919 DLDMMGEVRSVHSLSGGESFLVSLALALGLSSLSSNRMNVESLFIDEGFGSLDMDTLRIA 978 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +DAL+ L G+ IGVISHV M ERIP Q++V K G G SK+ Sbjct: 979 MDALERLQMQGRKIGVISHVAEMMERIPAQVQVVK-TGSGRSKV 1021 >UniRef50_B3JFY9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JFY9_9BACE Length = 1272 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 183/666 (27%), Positives = 289/666 (43%), Gaps = 159/666 (23%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+L + + NL SL+GE IDF EP S LF+I G TG+GK+T+LDA+CLALY PR Sbjct: 1 MKLLKVIMYNLASLEGEQVIDFESEPLRSADLFSIVGETGSGKSTILDAVCLALYGLAPR 60 Query: 61 LSNVS--------QSQND----------LMTRDTAECLAEVEFEVK-GEAYRAFWSQNRA 101 + ND ++ + T EC AEV F + G YRA WS + A Sbjct: 61 FYGADNFDYYHTERPNNDQVLDPDDPRNILRKGTKECFAEVVFLARDGFRYRARWSCSIA 120 Query: 102 RNQPDGNLQVPRVELARCADGKILADKVKDK-LELTAT-----------------LTGLD 143 R N P L R A + A + +K +E+T + GLD Sbjct: 121 RI----NYTRPERRLYRIAVDE--AGRTSEKEVEITGGGRQKRGHKNINNEGLDRIIGLD 174 Query: 144 YGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT----------------------EI 181 YG+FTR+++L+Q FA F+ A K++A LLE+LTGT E+ Sbjct: 175 YGQFTRTVMLAQNSFANFVKADDKDKAVLLEKLTGTELYTAVARKIYEFYKEAEAAYNEV 234 Query: 182 YGQISAMVFEQ-------------------HKSARTELEKLQAQ--------ASGVTLLT 214 + Q+ A Q + + EL+KL+ Q A V Sbjct: 235 FNQVKAFAVHQLSDEKLAEVETRKGELDASFRILQAELQKLKDQQKWYADLCALEVAFAG 294 Query: 215 PE----QVQSLTASLQVLTDEEKQL--ITAQQQEQQSLNWLTRQ-DELQQEASRRQQALQ 267 E Q +LQ + DE + L + + Q+ L R+ EL +E R+Q LQ Sbjct: 295 EEAKWRQASEKAQNLQPVRDELRMLDEVAPVRDVYQTYMNLQRELKELTEEVGRKQ--LQ 352 Query: 268 QALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN------TRLQ 321 + E+E+A+ + L + + +R E++ A R+Q E++ TRL+ Sbjct: 353 CSALEKEEAEKRKLLLDVKENYNVVREKQEQMLPLVTA---ARKQKVELDAQQATVTRLK 409 Query: 322 STMALRAS----IRHHAAK---QSAELQQQQQSLNTWLQE--------------HDRF-- 358 +L A +R A+ Q AELQ++Q L E DR Sbjct: 410 EEESLLAKKEELLRKEQAENELQVAELQKRQAEAERMLAELIPHRDMLENKNAVSDRLES 469 Query: 359 -----RQWNNEPAGWRAQF----SQQTSDRE---HLRQWQQQLT----HAEQKLNALAAI 402 ++W E W+ +QQ RE L++ ++L QK ALA + Sbjct: 470 LYKAVKRWQKESEDWKKNGIELENQQLVCREEENRLQKSDEELVLCRESIRQKTQALAGV 529 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + +A + + L++ L ++ ++K L++ ++A + +T+E +AA Sbjct: 530 NVEALQQRMADVTKCYTDLERLKK----LQAAVMERRKSLSENRLASEQITKEL---DAA 582 Query: 463 LNEMRQRYKEKTQQLADVKTICE--QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + EM+ E+ + + + E Q A ++ E RA L+ G+PCP+CG+ HP E Sbjct: 583 MREMKVLTTEREEINRLLPGLEEAWQLASSRSAEHMRAALKPGEPCPVCGAREHPYAEGI 642 Query: 521 -QALEP 525 + L+P Sbjct: 643 AEVLQP 648 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/165 (49%), Positives = 112/165 (67%), Gaps = 2/165 (1%) Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVD 938 DW LN ++G+ GDKFR+ AQ TL L+ AN+QL L+ RY L+ + ++L + V+D Sbjct: 1107 DWKELNDILGNANGDKFRETAQCFTLRFLIRQANEQLRMLNHRYSLE-QVRDSLGIRVID 1165 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTAL 998 +AD VR+ +LSGGE+FL+SLALAL LS L S + +LF+DEGFGTLDS +L+ + Sbjct: 1166 HDRADEVRNISSLSGGETFLISLALALGLSSLSSRNIPMCNLFVDEGFGTLDSNSLNMVI 1225 Query: 999 DALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DAL +L + GK +GVISH M+ERI QI+V K+ G S LE Sbjct: 1226 DALSSLQSMQGKKVGVISHTAEMRERIRTQIRVVKVGSGGRSALE 1270 >UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococcus RepID=Q03JT5_STRTD Length = 1059 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 279/1116 (25%), Positives = 485/1116 (43%), Gaps = 155/1116 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L N + E I+FT+ F LF I G TGAGK+TL DA+ +AL+ T Sbjct: 1 MRPVQLELTNFGPYRKEV-INFTQ--FDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--FWSQNRARNQPDGNLQVPRVELA- 117 NV + ++ + F+ YR Q RA+ +Q L Sbjct: 58 DRNVEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVI 117 Query: 118 --RCADGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + +I L DK+K+ + + GL+ +F + +LL Q F+ FL K + ++L Sbjct: 118 VDKIGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQIL 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-----------VTLLTPEQVQSLT 222 +++ GT I+ + + E+ + + +++K QAQ +T+L Sbjct: 178 KKIFGTGIFDRFQKSLEERLRQSNKDMDKRQAQIDSHFASQVWSEEELTVLASTPASEKL 237 Query: 223 ASLQVLTDEEKQLITAQQQ----EQQSLNWLTRQDELQQEASRRQQALQQA-----LAEE 273 A L+ + ++ +T Q+ + L L + + Q+ ++ Q L+QA L E Sbjct: 238 ARLEEFLSQRQESLTEQKSILKAAHEDLAQLQKSFQTAQDLAKIFQELEQAKERYRLEIE 297 Query: 274 EKAQPQLAA---LSLAQPARNLRPHWERIAEHSAALAHIRQQIE---EVNTRLQSTMALR 327 E AQ Q A L Q A+ L+ + ++ L + Q +E E + Q Sbjct: 298 EGAQGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDV 357 Query: 328 ASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQ 387 + + A QS + Q+++ L TW ++ ++ A + + + T++ + L + Q Sbjct: 358 KAKKEELAIQSEDFLQKEEELETWKEDI----IYSQSLAQEQEKIKRSTTNYKQLEETYQ 413 Query: 388 QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 Q A +++ L L A+ ++ AE+ L + G V Q LAQ Sbjct: 414 Q---ARKEVEMLNKSLSDLEANRLSLESLHEAEK------LFQIVGYSVENQ--LAQDLK 462 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR--------AQ 499 I+N+ QE T+ E R + A +E +TL ++R A+ Sbjct: 463 EIENLNQELTK-----TEKRHQTLSFDIDQAQEILKELEEELRRTLVSRRQLMIVQLQAE 517 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+ G PC +CG+ HP V QA E +AL+N + ++ + A Q+ ++ + Sbjct: 518 LEEGHPCMVCGALEHPNVGGAQADE--------VALKNLMDQVEKLQAQKEKQVATLSNR 569 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD-------DIQPWLDAQDEHERQL 612 Q +E S RQD L Q V A+L Q L+ D +D + + + L Sbjct: 570 -QATLSEVASKRQD---LLDQVTKVKATLEKHYQELEEHVKGRFDFDFSIDYETDRGQAL 625 Query: 613 RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQ 672 L ++ QY Q++++R T Y L + ++ + LA Q Sbjct: 626 LL----------------KVEQYYQELQKRYDKEETDYIRYQDELGKAQKKATDLAKTYQ 669 Query: 673 EAQS-WQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV----VLEN---WRQVHE 724 EA++ Q Q L LQ +L + E + L H E + V EN + Q+H Sbjct: 670 EAKAVLDQAQERLEDLQEAHPELESV-EVYQERISLAHQELNLYNKQVKENSEAYNQLHA 728 Query: 725 QCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS---VFDDQQAFL--------AAL 773 + Q +++ + Q +++ A+ + +L+A D +Q L A Sbjct: 729 DIKGIKGQIESITKSKDKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLIEVNNQAIP 788 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD-DGLALTV--TVEQIQQ 830 M + LT LKQ L+ Q R+ Q L+ Q +PD D LA V E + Sbjct: 789 MLQAKLTTYATLKQELQAQIRKGQELL---------QNQEQPDLDSLAQAVQNCQEIYDR 839 Query: 831 ELAQ---THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 +LAQ + L++ T + Q K D+ Q+ Q+++ + + V+ G +L Sbjct: 840 QLAQFSVMEKGLKDATAT----YQAAKTLQDSNQEAFKAHQELSDLVKVVK--GENTALT 893 Query: 888 GSKEGDKF---RKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEA-----LEVEVVDT 939 G + + + F Q L N ++ LT ++L + A L++ V D Sbjct: 894 GRLNLEVYVIRQYFQQILDYANANYIG--LLTDNRYSFVLSEEGRRARDHFGLDINVYDQ 951 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDT 996 + R ++LSGGE+F+ +LA+AL+LS++V + ++ +++LF+DEGFG+LD E L Sbjct: 952 LTG-SERSVKSLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTK 1010 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 A+ L+ + + +GVISHV+ MKE I Q+ + K Sbjct: 1011 AISVLEQI-GENRMVGVISHVDDMKEGIAQQLVIIK 1045 >UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilonii AK1 RepID=A6D4U6_9VIBR Length = 1014 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 124/408 (30%), Positives = 204/408 (50%), Gaps = 55/408 (13%) Query: 664 ESWLATRQQEAQSWQQRQNELTALQNRI----QQLTPILETLPQSDELPHCEETVVLENW 719 ES L E + Q+ N LT N+ +QL ++ L +++ + +VL+ Sbjct: 608 ESRLNKHVSETSAKQELLNTLTNSVNKAAISKEQLRAVVVQLESNNKTGYANAQLVLQRQ 667 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA---------------------L 758 + ++ + L + Q+ A++L K Q+ DT L Sbjct: 668 ASISDELMQLSQALEAAQRYANQTAETLVKYQSHLDTLTKQLKDLSNEHASSVERWKTLL 727 Query: 759 QASVFDDQQAFLAALMDEQTLTQLE-QLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 +S F D++AFL++++DE + LE +L+ + ++ R ++ L T E + + Sbjct: 728 LSSHFSDEEAFLSSIVDEPRIAALELELETFVRDEVRVSEQLKLLTEELKGVEHPNVQEL 787 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR--QQQQTLMQQIAQMTQ 875 +A T Q L Q Q QQ K D+ N + +L+ Q A++ + Sbjct: 788 LVAKNETDASYQHMLGQFQQ-------------QQSKLDSLNNVLTRVNSLVSQNAELDK 834 Query: 876 QVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK----- 927 Q + G L+ + K G+K +F G+ LD+++ A+Q+L + GRY L+RK Sbjct: 835 QYQVVGTLSDVANGKTGNKISLHRFVLGVLLDDVLIQASQRLRLMSKGRYDLKRKETRSK 894 Query: 928 --ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 A L++ V D + RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+ Sbjct: 895 GNAGSGLDLIVEDAYTGKW-RDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFI 953 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 DEGFG+LD E+LD A+ L L SG+TIG+ISHV +KE++P+++ V Sbjct: 954 DEGFGSLDPESLDLAVQTLVELQQSGRTIGIISHVSELKEQMPLRLDV 1001 >UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C1D7_LISGR Length = 1014 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 162/307 (52%), Gaps = 32/307 (10%) Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQ----LKQNLENQRRQAQTLV 800 Q L + +A F L+ F A+ A + ++ + +LE+ + + E + + Q L Sbjct: 712 QELDEERASFKQLLKEQEFASYDAYKQASLTDEEMDKLEKQIQAFQNDFEIAKSRYQDLS 771 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 T+ A T H +E++ QE Q ++L E T ++R +L +N Sbjct: 772 TKLANTTYPDLDH-----------LEEVWQEKQQQRERLEEQTV---KLRDRLTFKRENF 817 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL 918 Q+ + M +A+ Q+ + G+L K K F ++ G LD ++ AN +L ++ Sbjct: 818 QRFEKEMHHVAKQEQKYAELGFLADTARGKNERKLTFERYVLGAFLDTIIERANLRLAKM 877 Query: 919 -HGRYLLQRK-------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 GR+ L RK A LE+EV D + +R RTLSGGESF SLALAL+L+++ Sbjct: 878 TGGRFQLSRKLDRSKGNAQSGLELEVYDAYTG-YMRHVRTLSGGESFKTSLALALSLAEV 936 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 V + ++++F+DEGFGTLD E+L+ A++ L SG+ +G+ISHV +KERIPV+ Sbjct: 937 VQEMAGGISLETMFIDEGFGTLDPESLEMAVECLLETQESGRLVGIISHVPELKERIPVR 996 Query: 1028 IKVKKIN 1034 ++V N Sbjct: 997 LEVTATN 1003 >UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG1_9BACT Length = 1151 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 96/247 (38%), Positives = 144/247 (58%), Gaps = 12/247 (4%) Query: 798 TLVTQTAETLAQ-HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 T + Q+AE Q H +H+P + ++Q QE +Q ++ + N Q ++ +KQ Sbjct: 912 TALYQSAEKAHQQHLEHQPAQTRDALLAIQQEYQERSQRNELIAANARMQNH-QEAVKQL 970 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 D + + +TQ+ +DW + IG+ +G RK AQ TL L+ ANQ++ Sbjct: 971 GDK-------AEALNLVTQEKDDWTAITDAIGA-DGKTLRKIAQCYTLSFLIAHANQEIR 1022 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 + + RY LQ+ +L + V+D +AD +RDT +LSGGE+F+VSL LAL LS L S Sbjct: 1023 KFNSRYELQQ-VKHSLGIRVIDHDRADDIRDTTSLSGGETFIVSLGLALGLSALSSRNIS 1081 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKING 1035 ++LF+DEGFGTLD +TL T +D+L L +S GK +GVISH + M ERI QI++ K Sbjct: 1082 FENLFIDEGFGTLDPDTLATVIDSLAMLQSSQGKKVGVISHTDTMSERITTQIRIIKNGN 1141 Query: 1036 LGYSKLE 1042 G S +E Sbjct: 1142 SGSSHIE 1148 >UniRef50_Q2IN23 Exonuclease SbcC n=2 Tax=Anaeromyxobacter RepID=Q2IN23_ANADE Length = 1245 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/190 (44%), Positives = 117/190 (61%), Gaps = 1/190 (0%) Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 +L++D D R + + + + W L +IGS +G +FR++AQGL LD L+ A Sbjct: 1052 ELRRDEDARARHAEVSGALEAARAAADRWERLAKVIGSADGSRFRRYAQGLALDGLLEAA 1111 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 N L L RY L R LE++VVD D VR LSGGE FLVSLALAL L+ L Sbjct: 1112 NVHLRDLARRYELMRVPGADLEIQVVDHDLGDEVRTVNGLSGGELFLVSLALALGLASLS 1171 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 + +LF+DEGFGTLD +TL+ A+ AL+ L +G+T+GVISHV + ERI VQ+ V+ Sbjct: 1172 TRAAHARTLFIDEGFGTLDRDTLEHAMAALEGLRQTGRTVGVISHVPELHERIGVQVTVE 1231 Query: 1032 KINGLGYSKL 1041 +++ G S+L Sbjct: 1232 RVSA-GRSRL 1240 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 19/205 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R +NL SL G++++ R P A G+F+I GPTG+GK+TLLDA+CLALY +TPR Sbjct: 1 MRILAIRGENLASLYGKFELRLDRAPIAGAGIFSIAGPTGSGKSTLLDALCLALYGKTPR 60 Query: 61 LSNVSQSQ---------------ND---LMTRDTAECLAEVEFE-VKGEAYRAFWSQNRA 101 L + + + ND L++R TA AEVE++ + G Y A W RA Sbjct: 61 LRDRAAGKRVMVGWSEEGETLDMNDVRALVSRGTAGASAEVEYQGMDGRRYLARWRVRRA 120 Query: 102 RNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAF 161 R++ +G Q + + G++LA+KV + G + R+++L Q +F F Sbjct: 121 RDRVEGAFQAQAMTVEDLDTGEVLAEKVTQAVARNEAAIGFTFDELKRAVVLPQFEFTNF 180 Query: 162 LNAKPKERAELLEELTGTEIYGQIS 186 L A RA +LE +TGT +YG++S Sbjct: 181 LRADADVRAAILERVTGTAVYGRLS 205 >UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M1_9LACT Length = 1019 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 122/205 (59%), Gaps = 22/205 (10%) Query: 849 IRQQLKQDADNRQQQQTLMQQI-----AQMTQQVEDWGY--LNSLI-GSKEGD--KFRKF 898 ++QL++ + Q+++ QI A+ QQ E Y L+ + GSKE D F ++ Sbjct: 805 FKEQLRELIGTEKTVQSILSQIQFNYHAKKGQQEEYLMYKELSEMANGSKETDYISFERY 864 Query: 899 AQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVEVVDTWQADAVRDTRT 950 G+ + ++ AN + T++ RY+L R + L+++V D + R +T Sbjct: 865 VLGIYFEEIIEAANTRFTQMTIDRYVLIRNKEKTKGAGPKGLDLDVFDNYTG-MKRSVKT 923 Query: 951 LSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 LSGGESF SLALAL LSD++ S +D+LF+DEGFGTLD+E+LD+A++ L LN Sbjct: 924 LSGGESFKASLALALGLSDVIQNHSGGVSVDTLFIDEGFGTLDAESLDSAIETLFELNQR 983 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKK 1032 G+ +G+ISHVE +K RIPV I+V K Sbjct: 984 GRLVGIISHVEELKTRIPVHIEVTK 1008 >UniRef50_C3RMV9 Exonuclease sbcC n=3 Tax=Bacteria RepID=C3RMV9_9MOLU Length = 690 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 147/569 (25%), Positives = 264/569 (46%), Gaps = 90/569 (15%) Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 + L+ +PCP+CGS +HP + + + V Q L + K E + L I Sbjct: 172 SSLKENEPCPVCGSLNHPQLADFD--QKIVYQEDLKKAKKNFDKCSETRNDIYNAL--IL 227 Query: 558 KQ-----LQRD-ENEAQSLRQDEQALTQQWQAVTASLNIT-------LQPLDDIQPWLD- 603 KQ L++ EN+ Q L +E+ + + V +NI + LD+ +L+ Sbjct: 228 KQQEVTLLKKQMENDCQRLGIEEELGKEVFIKVLGKINIDENKLLKQAKELDNEIIYLNN 287 Query: 604 ---AQDEHERQLRLLSQR-HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQ 659 + H++ L LL Q + Q+ A+ Q+ Q ++EQ +QL Sbjct: 288 LKISLANHQKDLDLLEQNIQKNNAQVQAYKDQLNQVIGRMEQNKQL-------------- 333 Query: 660 EDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 +D T Q Q +++Q EL L T I++ + E + Sbjct: 334 KD------LTHHQVDQQIEEKQKELLGL-------TKIIKDIE--------------EKY 366 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 R ++EQ + L +Q ++ QQ + Q+ ++ L S+F D++ FL + + + Sbjct: 367 RSINEQIIQLEAQNRSYCQQIKDEENNYQQVLREYRGKLN-SLFTDEKEFLEII---KNV 422 Query: 780 TQLEQLKQNLENQRRQAQT-LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 +QLE N+ ++ Q L+ + + H+ G+ + + VE ++++L QK Sbjct: 423 SQLE-------NKEKEYQAYLIAKDSLNKQIHELQLELKGIEV-IDVEVVKEKLIILKQK 474 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FR 896 L + QL + + + Q+++ + + L+ + K + F Sbjct: 475 LDSALNILNNLNAQLMTVTSTIKNIKNIDQELSNSHDIYQCYLDLSEVTSGKNSYRISFE 534 Query: 897 KFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEVVDTWQADAVRDT 948 ++ +N++ AN L R+ GRY L R+ + LE++V+D ++ +RD Sbjct: 535 RYVLAAYFENILVYANTLLKRMSQGRYQLYRRDNRSKGAGKQGLELDVLD-LESGLLRDV 593 Query: 949 RTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALN 1005 +TLSGGESF +L+LAL LS ++ + +++LF+DEGFG+LDS++LD A+D L + Sbjct: 594 KTLSGGESFKAALSLALGLSKMIQGYAGGIELNTLFIDEGFGSLDSQSLDQAIDCLIDIQ 653 Query: 1006 ASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 GK IG+ISHV +KERI +I + + N Sbjct: 654 QDGKLIGIISHVSELKERIDHKIILSRKN 682 >UniRef50_B8JB08 Exonuclease SbcC n=1 Tax=Anaeromyxobacter dehalogenans 2CP-1 RepID=B8JB08_ANAD2 Length = 1247 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 145/275 (52%), Gaps = 19/275 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R +NL SL G++++ R P A G+F+I GPTG+GK+TLLDA+CLALY +TPR Sbjct: 1 MRILAIRGENLASLYGKFELRLDRAPIAGAGIFSIAGPTGSGKSTLLDALCLALYGKTPR 60 Query: 61 LSNVSQSQ---------------ND---LMTRDTAECLAEVEFE-VKGEAYRAFWSQNRA 101 L + + + ND L++R TA AEVE++ + G Y A W RA Sbjct: 61 LRDRAAGKRVMVGWSEEGETLDMNDVRALVSRGTAGATAEVEYQGMDGRRYLARWRVRRA 120 Query: 102 RNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAF 161 R++ +G Q + + G++LA+KV + G + R+++L Q +F F Sbjct: 121 RDRVEGAFQAQAMTVEDLDTGEVLAEKVTQAVAFNERAIGFTFDELKRAVVLPQFEFTNF 180 Query: 162 LNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 L A RA +LE +TGT +YG++S ++ E+L+ + GV +L E +L Sbjct: 181 LRADADVRAAILERVTGTAVYGRLSQAAHQRLGRELEVRERLEGELGGVKVLDAEARAAL 240 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQ 256 A L ++ A + + + W R EL+ Sbjct: 241 QARQAELARALEEAKAAARAAEAEVRWHQRDAELR 275 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 843 TTSQGEIRQQ----LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 T GE Q L++D D R + + + + + W L +IGS +G +FR++ Sbjct: 1039 ATRLGEEHSQVTLDLRRDEDARARHEEVSGALEAARAATDRWERLAKVIGSADGSRFRRY 1098 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE--S 956 AQGL LD L+ AN L L RY L R LE++VVD D VR LSGGE Sbjct: 1099 AQGLALDGLLAAANVHLRDLARRYELMRVPGADLEIQVVDHDLGDEVRTVNGLSGGELFL 1158 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 ++LALAL L+ L + +LF+DEGFGTLD +TL+ A+ AL+ L +G+T+GVISH Sbjct: 1159 VSLALALALGLASLSTRAAHARTLFIDEGFGTLDRDTLEHAMAALEGLRQTGRTVGVISH 1218 Query: 1017 VEAMKERIPVQIKVKKINGLGYSKL 1041 V + ERI VQ+ V++++ G S+L Sbjct: 1219 VPELHERIGVQVTVERVSA-GRSRL 1242 >UniRef50_A7VZD0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZD0_9CLOT Length = 914 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 11/146 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRK------ASEALEVEVVDTWQADAVRD 947 + F G+ LD+++ AN T L G RY L RK L++E+ D + R+ Sbjct: 759 LKMFVLGVMLDDILSRANVYFTTLSGGRYQLSRKREGASRGYSGLDLEIYDAYSGGG-RN 817 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 TLSGGE FL SL+LA LSD+V S R++S+F+DEGFGTLD ETL+TA+ AL + Sbjct: 818 VDTLSGGELFLASLSLAFGLSDVVQSYSGGVRLESIFIDEGFGTLDEETLNTAMKALFEI 877 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKV 1030 SG+T+G+ISHV +K RIP QI++ Sbjct: 878 QKSGRTVGIISHVAELKSRIPAQIRI 903 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 176/734 (23%), Positives = 299/734 (40%), Gaps = 139/734 (18%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L+++ +G +I F+ LF ITG TG GKTT+LDAIC AL+ Sbjct: 1 MTPIRLKMQAFGPYQGAVEIAFS---GLRGKLFLITGSTGGGKTTILDAICFALFCRATG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--FWSQNRARNQPDGNLQVPRVELAR 118 Q +L + + + EF + E YR W ++ R G +++ Sbjct: 58 GRRTWQDMRNLSAGEDVPTVVDFEFSLGEEQYRFQRSWRWHKVRG--SGRMEMRDEHQCS 115 Query: 119 CADGK---ILADKVKDKL-ELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 +G+ +LA + ++ E L GL +F++ ++L QG+F L + E++++ + Sbjct: 116 RRNGEQWELLASGAESRVREYAQRLLGLTCEQFSQVIVLPQGEFRKLLLSNSTEKSKIFQ 175 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV-----TLLTPEQVQSLTASLQVL- 228 L TE + +I+ K A++ E L+ + G+ +L E VQ+ + L++L Sbjct: 176 TLFQTEKWERIT-------KCAQSMAEDLEQRCGGLLSARQAVLESEGVQA-SEELELLR 227 Query: 229 --TDEE--KQLITAQQQEQQSLNW------LTRQDELQQEASRRQQALQQALAE----EE 274 T+EE K + A++ E N + R E + R Q+ L QA AE E+ Sbjct: 228 KATEEEYEKSIAAAKKTENDLKNISDIIQRVNRLKETETVFRRLQKQLAQAAAEKRALEQ 287 Query: 275 KAQPQL-AALSLAQPARNLRPHWERIAEHSAA---LAHIRQQIEEVNTRLQSTMALRASI 330 K Q + AA LA R+ E AA LA Q+ E T+L+S A + + Sbjct: 288 KRQEAVKAAAGLA-----------RLEEEKAAGLQLAAKHQEQMETLTKLKSLAAEKERL 336 Query: 331 RHHAAKQSAE-LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQL 389 A Q + L+ +Q++L S E++ + + L Sbjct: 337 EKEIASQKEQRLEWEQKAL----------------------------SAAENVERGRAYL 368 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 KL AL + + + A L + E+ ++RLA Q A+ Sbjct: 369 RELNDKLKALPEASRSFQELKTAFELLKQWEE----------------GKRRLAGEQSAL 412 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLC 509 Q + Q L+ + Q E+ QQ +AR + L+ G+PCP+C Sbjct: 413 QKAEEILEQSRVKLSAL-QESLERAQQ----------KAREDMAGHLASGLRDGEPCPVC 461 Query: 510 GSTSHPAVEAYQALEPGVN-----QSRLLALENEVKK--LGEEGATLR--GQLDAITKQL 560 G+ HP+ +LE GV + RL L E ++ +GA + GQ + + K + Sbjct: 462 GAVHHPSP---ASLEIGVTVTPEEEKRLKRLVKEAQEAFTSAQGAFTKHQGQRELLEKNV 518 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 + E + L A L LQ ++ P Q E + L+QR Sbjct: 519 RESERRIADFPYPPEKLPALLAAAEKKL-AGLQKAGELLP----QGE-----KRLAQREN 568 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 + + + Q Q E + + ++ TLP+E + +S Q+ Q Sbjct: 569 EEKTAKLQADRSKERQAQWENKLSAVSAEISSLWGTLPEERQGQSL-------DQAEQGL 621 Query: 681 QNELTALQNRIQQL 694 +N LT +Q R++ L Sbjct: 622 RNSLTEVQARLESL 635 >UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLJ3_9GAMM Length = 1022 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 160/564 (28%), Positives = 258/564 (45%), Gaps = 93/564 (16%) Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 +QL+ QPCP+CGS HPA P + + L ++E+ Sbjct: 510 SQLKPQQPCPVCGSKQHPA--------PAQSDTTALVSQHEL------------------ 543 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTAS------LNITLQPLDDIQPWLDAQDE---- 607 E+ + R EQA + A+T + LN L D+ L Q E Sbjct: 544 ------EHARATYRAAEQAFYDEQTALTKANEHERQLNQQLSEFTDLSEALIEQQEVQLN 597 Query: 608 HERQLR--LLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEES 665 ER+ R LL++R LQ ++ QQ + + Q+EQ Y Q + Sbjct: 598 EERRTRAELLTRRQTLQSKLDQAEQQRSELEHQLEQ-------CRAKYTEVKAQHARVNA 650 Query: 666 WLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL-PQSDELPHCEETVVLENWRQVHE 724 L + Q WQQ + ++ RI Q+ L L Q ++ H +Q E Sbjct: 651 DL---EHLNQRWQQSDINVAEVKPRIDQIKQQLRQLEKQFEQAQHA--------MQQQSE 699 Query: 725 QCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQ 784 Q A H+Q + +++ AQ+L+ A+ + L +S F F +A + E +LEQ Sbjct: 700 QYHATHTQLKAEVEENKRLAQALEAAEKAWQAQLASSPFATYNEFQSAHVSE---PELEQ 756 Query: 785 LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTT 844 L + ++ L + AE +P D LT+ +E+++++ + Sbjct: 757 LNSAVAEHNQRMVELRSMIAELQRYVDDIQPADTEQLTLRLEKLRKDFE----------S 806 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQ---QIAQMTQQVEDWGYLNSLIGSKEGDKF--RKFA 899 Q + QQ +N + Q L Q Q ++ + + G L +L + + +F Sbjct: 807 EQTQFNQQQSALFNNEKAAQRLRQLATQNKELEAKYANIGTLANLTNGQNDQRLSLHRFI 866 Query: 900 QGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTL 951 + LD+++ +A+Q L ++ H RYLL R +++ L + V D + R T+TL Sbjct: 867 LSVLLDDILIVASQHLAQMTHHRYLLVRENEVNDARSASGLNLAVTDAY-TGIQRSTKTL 925 Query: 952 SGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 SGGESF +LALAL LS++V S ++D LF+DEGFG+LD + LD A+D L L ASG Sbjct: 926 SGGESFQAALALALGLSEVVQQYSGGIKLDMLFVDEGFGSLDEQALDAAIDVLANLRASG 985 Query: 1009 KTIGVISHVEAMKERIPVQIKVKK 1032 +++G+ISHV +KERI ++I V K Sbjct: 986 RSVGIISHVRELKERIDMRIDVHK 1009 >UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 Length = 1023 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 102/340 (30%), Positives = 173/340 (50%), Gaps = 30/340 (8%) Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 ++RQ + L S Q+ Q+ A ++LQ + F A++ + F +++ ALM Sbjct: 693 SFRQADKDITRLESTLQSAQKTTADAQEALQVQREIFKEAMKQNDFPTYESYKQALMSVD 752 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 L E+ N E +R A + E L Q +P+ +EQ++ + + Q Sbjct: 753 ELKVQEEKVTNFERKRHLAISRQADLTEKLKNKQ--KPN--------LEQLEFSMKEKQQ 802 Query: 838 KL---RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 +L E+T Q E+ + K+ N Q +Q + + + D G L K + Sbjct: 803 QLTKAEESTMKQRELVTKQKEVVLNYQNS---IQAVEKAEEDYADIGLLADAARGKNARR 859 Query: 895 --FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADA 944 F ++ + LD ++ AN +L+++ GR+ LQRK +A LE+EV D + Sbjct: 860 LTFERYILAMFLDTIIQRANHRLSKMTSGRFELQRKMEKAKGNVQSGLELEVFDEYTG-L 918 Query: 945 VRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 R +TLSGGESF SLALAL+L+++V + ++++F+DEGFGTLD E+L+ A++ L Sbjct: 919 TRHVKTLSGGESFKTSLALALSLAEIVQEMAGGISLETMFIDEGFGTLDPESLEVAVECL 978 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +G+ +G+ISHV +KERI +++V N +K Sbjct: 979 LETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKF 1018 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 10/239 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ + + IDF E + +F I+G TGAGK+T+ DAI A++ + Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDF--EKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANT 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--FWSQNRARNQPDGNLQVP-RVELA 117 S S D + F +K + Y+ Q A+ + +G P + EL Sbjct: 59 FDRESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELY 118 Query: 118 RCA--DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K+LA V+D L L+ +F + +++ QG+F L + KE+ +L+ Sbjct: 119 ELIGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQR 178 Query: 176 LTGTEIYGQISAMVFEQHKSAR---TELEKLQAQASGVTLLTPEQVQSLTASLQVLTDE 231 L T Y ++ +++E+ K A E K A+ + ++L E T+ + VL E Sbjct: 179 LAHTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPDVEITGKTTSEISVLQTE 237 >UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=SBCC_VIBCH Length = 1013 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 98/283 (34%), Positives = 161/283 (56%), Gaps = 24/283 (8%) Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 S F D+ A+LAA + ++ + +E +Q + + R A Q A + +++RP+ Sbjct: 729 SGFSDESAYLAARLTDEAIVNIE--RQIAQYEERSAMLSGEQQALSRKLAEKNRPELE-P 785 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 L V V Q ++++A Q ++ + +++ KQ AD L Q+ + + + Sbjct: 786 LLVKVTQAEEKMALALQAFTQHQSRMDGLQRVAKQLAD-------LYQKNRALEAEYQVV 838 Query: 881 GYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA------ 931 G L+ + K G K +F G+ LD+++ A+Q+L ++ GRYLL+RK A Sbjct: 839 GTLSDIANGKTGAKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGS 898 Query: 932 -LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 L++ V D++ + RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+DEGFG Sbjct: 899 GLDLMVEDSY-SGKWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFG 957 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 +LD E+LD A+ L L G+TIG+ISHV +KE+I +++ V Sbjct: 958 SLDPESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDV 1000 >UniRef50_C1XNQ1 ATPase involved in DNA repair n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNQ1_MEIRU Length = 906 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 159/288 (55%), Gaps = 16/288 (5%) Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 SL + Q +T + + F+D +A AA + + ++ L++ +++ + + + E Sbjct: 623 SLARQQEAVETLWREARFEDLEAVRAARL---SPAEVAALRKRVQDHELEGAQIARELRE 679 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 A+ Q P D V + +Q LA+ + L G ++ LK ++++ Sbjct: 680 LEAKLQGQEPVDA----AQVAEQKQRLAELKEALDSTKQRLGARKEALKHLQKQLERKRQ 735 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLL 924 + ++ A + +Q++ W L + +G++F+ F L+ A++ + L H RY L Sbjct: 736 IQKEKADLDKQIDLWEQLELDL---KGNRFQDFLLERYQSGLLSRASELIQSLSHNRYTL 792 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 + + + V D W +A+R RTLSGGESF+ SL LAL+LS+ +S + RI +LFLDE Sbjct: 793 RLEDGDYF---VFDRW-TEALRPVRTLSGGESFMASLCLALSLSEHLS-RGRIGALFLDE 847 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 GFGTLD+ETL+ L+AL + G+ +G+++HVEA+ ER+P +++V K Sbjct: 848 GFGTLDAETLEQVAGVLEALPSQGRLVGIVTHVEALAERMPARLEVSK 895 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 84/186 (45%), Gaps = 24/186 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L + F + LFAITGPTG+GK+TLLDAI ALY TPR Sbjct: 1 MKPLKLLLDGFGPYAEAQAVQFDHD----VSLFAITGPTGSGKSTLLDAITYALYKATPR 56 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW-----SQNRARNQPDGNLQV-PRV 114 + S DL E+ F + + +R SQ+R + P Sbjct: 57 IG--SSGLKDLKHPQAESAKVELTFAMGEQVWRVVRVVGKESQSRLEYLQQNQWKTHPAS 114 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 E R D K+ A + G+DY FTR++LL QGQF FL PKER E L Sbjct: 115 ERVRELDAKL------------AEILGMDYETFTRAILLPQGQFDLFLRGSPKERRETLI 162 Query: 175 ELTGTE 180 +L G E Sbjct: 163 KLYGLE 168 >UniRef50_D2RLP5 DNA repair ATPase-like protein protein n=2 Tax=Acidaminococcus RepID=D2RLP5_ACIFE Length = 757 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/297 (30%), Positives = 155/297 (52%), Gaps = 30/297 (10%) Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + TAL S F DQ F+AA + L ++ ++ R+QA +L + Q + Sbjct: 466 YKTALDQSPFPDQHTFVAA---HKALASKPLWQEQVDRYRQQADSLQGELKILADQLKDK 522 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 P D + +Q+ + QT T G +++ L+++ +Q + L +++ ++ Sbjct: 523 TPPD-------LAPLQEAVRQTGSTAHTLATRTGALQETLRREEAALKQLEKLEKELDRL 575 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRK-----FAQGLTLDNLVHLANQQLTRL-HGRYLLQR- 926 E +G + L + +GD RK F LD+++ AN +L+++ GRY L R Sbjct: 576 Q---EAYGPIGLLASTAKGDNSRKLTFSSFVLQAVLDDVLQTANLRLSKISQGRYSLYRS 632 Query: 927 ------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRI 977 + + L +E++D + A R TLSGGE F SL+LAL LSD++ + + Sbjct: 633 QDIVDARKEQGLGLEIMDAFTGQA-RAVTTLSGGEIFFTSLSLALGLSDVLESYAGGLHL 691 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 D++ +DEGFG+LD ETLD+A+ AL L G+ +G+ISHV +KERI Q+++ N Sbjct: 692 DTILVDEGFGSLDPETLDSAISALLELQKGGRLVGIISHVAELKERISAQLEIIPTN 748 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 90/197 (45%), Gaps = 17/197 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYH-ETP 59 M+ L L + GE IDFTR N F ITGPTG+GKTT+LDAI ALY + Sbjct: 1 MRPLELVMNAFGPYAGEETIDFTR--LGENRFFLITGPTGSGKTTILDAITFALYGTASG 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGE--AYRAFWSQNRARNQ--PDGNLQVPR-- 113 L + ++D T D EV F + + Y + + N+ +G VP Sbjct: 59 DLRDNRSLRSDYATPDRK---TEVRFTFRNQDRTYEVTRTPEQVLNKQRGEGTRTVPAGA 115 Query: 114 --VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 VE+ + K+L L G +F + M+L QG+F FL A KER Sbjct: 116 SLVEILPEGERKVLGTSNSAVTRAVEQLLGFQARQFRQLMVLPQGEFRRFLVADSKERKT 175 Query: 172 LLEELTGTEIYGQISAM 188 +LE L T GQ SA+ Sbjct: 176 ILETLFKT---GQYSAL 189 >UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus RepID=SBCC_STAHJ Length = 1011 Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/136 (47%), Positives = 93/136 (68%), Gaps = 10/136 (7%) Query: 904 LDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEVEVVDTWQADAVRDTRTLSGGESF 957 L+ ++H AN +L R+ G RY L+R+ S LE+EV D + ++ R +LSGGE+F Sbjct: 863 LERIIHQANIRLERMSGERYQLKRRESISHGYSGLEIEVFD-FHSNKSRHISSLSGGETF 921 Query: 958 LVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 SLALAL LS++V S ++S+F+DEGFGTLD ETL+TALD L L SG+ +G+I Sbjct: 922 QASLALALGLSEVVQQESGGITLESMFIDEGFGTLDQETLETALDTLVKLKTSGRMVGII 981 Query: 1015 SHVEAMKERIPVQIKV 1030 SHV +K+RIP+ ++V Sbjct: 982 SHVSELKQRIPLILEV 997 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 80/327 (24%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTR--DTA 77 IDF E LF I+G TG+GKT L D I AL+ + S +++ +L + D Sbjct: 19 IDF--EQINKEQLFLISGKTGSGKTMLFDGIVYALF---GKASTEGRNEGELRSHFADGK 73 Query: 78 ECLA-EVEFEVKGEAYR-----AFWSQNRARNQPDGNLQVPRVE----LARCADGKILAD 127 ++ E EF++ + ++ F + P G L V + L + KI + Sbjct: 74 SPMSVEYEFKINDKKFKISRQAGFIKEGNTSLTP-GKLDVFEFDEESQLYELRESKISSG 132 Query: 128 K--VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQI 185 +KD L G++ +F + +L QG+F FL + ++ +L L + + ++ Sbjct: 133 NGFIKD-------LLGINAEQFRQLFILPQGEFKKFLVSNSSDKQSILRTLFNSIRFEEM 185 Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL-----TDEEKQLITAQQ 240 ++ Q K + +Q++S + +Q+L T E +LI Sbjct: 186 QNLLLNQVKDEK------------------KQIESRYSRIQILWEDIETFENDELIQF-- 225 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI- 299 +SLN + +D + KA PQ + ++L +E++ Sbjct: 226 ---KSLNSMQTKDII-------------------KAIPQFELV-----GQHLNEEYEQLK 258 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMAL 326 +EH+ AL I+++IEE N ++S L Sbjct: 259 SEHNDALEAIKRKIEENNKLIESLKEL 285 >UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES7_EXIS2 Length = 1002 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 107/307 (34%), Positives = 157/307 (51%), Gaps = 48/307 (15%) Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 +A+A +LQ F+ + F A M Q + EQL + LE RR+ Q V E + Sbjct: 705 EAEAALARSLQEERFETVEQFEQARMSRQAM---EQLAERLEADRRKRQD-VESGLERIR 760 Query: 809 QH--QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI-----RQQLKQDADNRQ 861 Q QQ RPD AL V Q + EL T + G I R +KQ D Sbjct: 761 QLILQQDRPDLA-ALRPVVRQAEAELV---------TATDGRIGVEKERLHIKQLVDA-- 808 Query: 862 QQQTLMQQIAQMTQQVED--WGYLNSL--IGSKEGDK---FRKFAQGLTLDNLVHLANQQ 914 L QQI + ED +G + L +G E + F + Q D ++ AN+ Sbjct: 809 -WSGLQQQI-----EAEDARYGIIGELARVGVGENAQRMTFETYVQTAYFDEILQAANRH 862 Query: 915 LTRL-HGRYLLQRKA-------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L + GR+LL+RK L++ V D + + R +TLSGGESF SLALAL Sbjct: 863 LHGMTSGRFLLERKTEAGKGLKKYGLDLNVFDAYTSQ-TRHVKTLSGGESFKASLALALG 921 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 LS++V S ++++F+DEGFGTLD E+L+ A++ L ++ ASG+ +G+ISHV+ +K R Sbjct: 922 LSEVVQEASGGVSLETMFIDEGFGTLDPESLEQAIETLLSIQASGRMVGIISHVQELKSR 981 Query: 1024 IPVQIKV 1030 + +I+V Sbjct: 982 VDAKIEV 988 >UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RHS7_CLOCL Length = 1047 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 177/698 (25%), Positives = 323/698 (46%), Gaps = 102/698 (14%) Query: 382 LRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLR-QHLVALHGQIVPQQK 440 L +++ QL + ++ + ++ I TL E + ++ L+ Q ++ + ++ K Sbjct: 406 LERYRTQLKNEKENIISIEGIIETLLRKE------KFIDENKLQHQKIIFKYKEMEENHK 459 Query: 441 RLAQL----QVAIQN--VTQEQTQRNAALNEM----RQRYKEKTQQLADVKTICEQEARI 490 L +L + ++N V +E + + AL E ++ Y+EK + + +I AR Sbjct: 460 LLGELYKLSKFIVENKQVVKESSDKLKALEENLVKDKRVYEEKNDFIINSSSILL--AR- 516 Query: 491 KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLR 550 +L G+PCP+CGS HP+ + P + R AL +E+ K + + Sbjct: 517 --------ELVEGEPCPVCGSKEHPSPRLVKGDIPTKEEMR--ALTSEIDK---KQRDII 563 Query: 551 GQLDAITKQLQ-RDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD-IQPWLDAQDEH 608 G L A+ +LQ + ++L+Q L + V + + D+ I P ++ Sbjct: 564 G-LSAVINELQGKIFASMETLKQKNNELIVRKLLVEG---LDIYDYDNVIAPVGKNIAKN 619 Query: 609 ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL------TTLTGYALTLPQEDE 662 + QLR +Q+ EL+ +I ++I++ + LL T L L E Sbjct: 620 KEQLR--AQKEELEKEIDKSKH----LTEEIDKNKGLLKGAKEKETKLNDLIL------E 667 Query: 663 EESWLATRQQEAQSWQQR----QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 S LA Q+ Q R +E+T+L I+ IL+ +++E +++E Sbjct: 668 VSSKLAKEQEALQGIYLRVPKEYHEITSLSKAIE----ILDKEIKNNE-------ILMEK 716 Query: 719 WRQVHEQCLAL----HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 + + C S ++ L++ +A L+ QF+ L +F++ + + A Sbjct: 717 LQNQYNDCKTYLEKAISTKEILEKNLEVATSQLENTYKQFEIEL-LKLFENAEEYKLA-- 773 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 T+ ++E+L E + R+ + + ++ G A V V +++E+ Sbjct: 774 -SGTINEIERL----ELEIREYNDAIKLNNDIYMNLEKEL---GEAKKVDVTVLEEEINM 825 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 ++ + T + I +LK++ D + I ++ + G L +L K +K Sbjct: 826 IKGQIEDMRTMRDGISSRLKRNRDILNSALEKTEAIRTKEEEYKILGELANLALGKGAEK 885 Query: 895 --FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADA 944 F F G D+++ AN +L ++ GR+ L R+ E L++++ D + A Sbjct: 886 VTFETFVLGNYFDDVIASANIRLMKMTGGRFYLVRREEEGSSRGRKGLDLDIFDNYTGKA 945 Query: 945 VRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 R TLSGGESF +LALAL LSD V S ++++F+DEGFGTLDSE+LD A+ L Sbjct: 946 -RPVNTLSGGESFKAALALALGLSDEVQNNSGGIELNTMFIDEGFGTLDSESLDNAIRCL 1004 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 L SG+ +G+ISHV+ +KERI Q+++ K+N G S Sbjct: 1005 LDLEKSGRLVGIISHVDDLKERITSQLQI-KVNAKGSS 1041 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 7/190 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+ + L L G +IDFT +F +TGPTG+GKTT+ DAIC ALY ET Sbjct: 1 MRPVKLVLSAFGPYSGVTEIDFT--LLGDKNIFLVTGPTGSGKTTIFDAICYALYGETSG 58 Query: 60 RLSNVSQSQNDLMT-RDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVE 115 + + + ++D + ++ E F VKGE Y + R + G+ +Q +E Sbjct: 59 NMRSGKELRSDFIDEKENHLTYVEFIFNVKGEDYYIKRVPQQMRKKLSGSGETMQNATIE 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 L + A + K D + + G++ +F + +++ QG F FL A KE+ +L + Sbjct: 119 LRKLAKDEKPLTKDGDVKKSIDEIMGINAEQFRKIIMIPQGDFRDFLCASTKEKETILRK 178 Query: 176 LTGTEIYGQI 185 + TE + +I Sbjct: 179 IFNTEPFKRI 188 >UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV7_9LACO Length = 1040 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 146/564 (25%), Positives = 258/564 (45%), Gaps = 66/564 (11%) Query: 499 QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITK 558 QL+ G PCP+CG+T HP + V + A + +L E A + Q D Sbjct: 507 QLKPGSPCPVCGATDHPHPAPLPKDDRVVLNDEVEAANQRLSQLQREQAAKKSQFDDQKH 566 Query: 559 QLQRDE---NEA----QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ 611 Q+ + NE L D+ A + + S + T+ L Q L+ E + Sbjct: 567 QVNEEMATINELLVQLSQLMNDDFATIDEAKEKVRSFSETVNKLR--QNLLN---EKRQT 621 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP--QEDEEESWLAT 669 +LL+++ +L + QQ + QQ++++ Q L T Y + Q + E++ AT Sbjct: 622 QKLLTEQSDLNQRQTEEQQQFTEAQQELDKLQMQLTTDRATYQAVVNDLQTEYEDAQSAT 681 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 Q WQ N Q Q+ ++ ++ E ++ L Sbjct: 682 AQ--VGEWQDEINHFQQHQQNTQR-----------------KQVMLAERVTNNQQELTGL 722 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 + QTLQ+Q + + Q LQ+ A + L S + + ++E LT L+ Q+ Sbjct: 723 NQLVQTLQKQIMESHQKLQQQLADYSPELDDSFW----TWAGGHINE--LTTLQSRVQDF 776 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 ++ + Q L+ + + + Q P+ VEQ QELA+ ++L E G++ Sbjct: 777 HTKQTRLQALIQRLEKQIGT--QSMPN--------VEQTSQELAEEQRRLAELQRQSGQL 826 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNL 907 +L+ Q + +Q ++V+D ++ ++ +K ++ L + Sbjct: 827 SNELQNILKTHDQVAKINRQQNSELKRVQDLQTVSDVMNGNTDNKLSLERYVLQSYLTEV 886 Query: 908 VHLANQQLTRL-HGRYLLQRKASEA---------LEVEVVDTWQADAVRDTRTLSGGESF 957 + +AN +L +L +GRY + A LE+ V D A R RTLSGGESF Sbjct: 887 LQVANGRLAKLTNGRYAFKLSDEAARGNGTKWSGLEINVYDD-NAGQERSVRTLSGGESF 945 Query: 958 LVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 + SLALAL L +++ ++ ++++LF+DEGFG+LD E L+ A++AL ++ + IG+I Sbjct: 946 IASLALALGLGEVIQERSGGIKVETLFIDEGFGSLDQEALEQAMNALQSIKGY-QMIGII 1004 Query: 1015 SHVEAMKERIPVQIKVKKINGLGY 1038 SHV ++ +IP Q++V NG+ + Sbjct: 1005 SHVTELENQIPNQLRVISRNGVSH 1028 >UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=SBCC_STAS1 Length = 1009 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 145/274 (52%), Gaps = 51/274 (18%) Query: 786 KQNLENQ----RRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ-------ELAQ 834 KQNLE + +++ Q+ A+ A+ + DD L E++QQ EL+Q Sbjct: 744 KQNLEKEIETFKKEKQSYELYIAQLKAETNNKKLDDTQQLKERFEEMQQVYETASTELSQ 803 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 K+ N+ EI + + + Q QQ + Q +A++ L G E Sbjct: 804 HDYKMEFNSKKITEINKIIDELNSELQSQQEVFQ-LAEI------------LAGKNE--- 847 Query: 895 FRKFAQGLTLDNLVHL---------ANQQLTRLHG-RYLLQRKA-----SEALEVEVVDT 939 Q LTL+N V + ANQ+L + G RY L R+A LE++V D Sbjct: 848 -----QKLTLENYVLIYYLERILTQANQRLAIMTGQRYQLTRRAQISQGYSGLEIDVFDA 902 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDT 996 ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGFGTLD ETL+T Sbjct: 903 -HSNQSRHITSLSGGETFQASLALALGLSEIVQQESGGISLDSMFVDEGFGTLDQETLET 961 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 ALD L +L ++G+ +G+ISHV +K+RIP+ ++V Sbjct: 962 ALDTLLSLKSTGRMVGIISHVSELKQRIPLILEV 995 >UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN2_CRYCD Length = 953 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 21/186 (11%) Query: 867 MQQIAQMTQQVED----WGYLNSL-----IGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 +++IAQ +Q++E+ YL L +G++ F + Q + D+++ AN++L+ Sbjct: 758 LKKIAQSSQRIEEEFSQISYLADLASGNAVGTQGKISFETYVQSVYFDSVLDAANERLSL 817 Query: 918 L-HGRYLLQRK-------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 + GRY L R+ L+++V D + RD +TLSGGESFL SL+LAL SD Sbjct: 818 MSEGRYTLLRRQQARDNRTQSGLDMDVFDAYTGKQ-RDVKTLSGGESFLASLSLALGFSD 876 Query: 970 LV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 ++ + ++D++F+DEGFG+LD+E L+ AL D L + +G+ISHVE +K+RI Sbjct: 877 VIQRQAGGIQLDTMFIDEGFGSLDTEALELALRVFDQLGRDKRLVGIISHVEELKDRIDH 936 Query: 1027 QIKVKK 1032 +I V+K Sbjct: 937 RIVVQK 942 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 142/552 (25%), Positives = 226/552 (40%), Gaps = 72/552 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LSL L IDF+ F +G+F I GPTG+GKTTL DA+ AL+ E Sbjct: 1 MRPLSLELCAFGPYADRVFIDFSL--FGESGVFLICGPTGSGKTTLFDAMKFALFGEASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + S T E E FE G+ YRA + +R++ G EL Sbjct: 59 TRRPTSSFASGFANATTEPFVEFIFEQAGKTYRARRVPHYSRSKKRGVGTTAAGGAAELV 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 G ++A K E L G+ +F++ ++++QG F+ L A K+RAE+ + Sbjct: 119 CETTGSVIASKANAMDEAVVDLLGITTEQFSQIVMIAQGDFSQLLTANTKQRAEIFRRIF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQAS-GVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TE Y I + E+ ++ +E + QA + LL E T + DE + Sbjct: 179 HTEPYQHIQERLVERKRTLEQHVEASEEQARIHLALLASENAPETT----MPNDE----V 230 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 QQ+ +L + Q + ++++ A E+ P S+ ++ Sbjct: 231 AGQQEVFLTLKGPIPSADKQGDPFAFERSVPSA---GEQDNPFTFEGSVLSRLDDIEKEL 287 Query: 297 ERIAEHSAALAH-IRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 IA H H + +Q E TRLQ S A+Q+ +L+++ ++L EH Sbjct: 288 ANIAAHDDMRKHSLTKQQAEAETRLQEIDRNLGS-----ARQTTQLEKRLAETTSYLVEH 342 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLR-QWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + + A W Q E LR + + + A +K L+ EV+ Sbjct: 343 E--NAYQTAQANW-----QTAQAEEGLRHRLSEDIATATEKARTLS---------EVSRL 386 Query: 415 LAQH--------AEQRPLRQHLVALH------GQIVPQQKRL----AQLQVAIQN--VTQ 454 QH A Q+ + ALH +I KR+ AQL+ A + + Sbjct: 387 EGQHTTAQSKVAASQKAATETETALHQARQQLEEIAEAAKRVHDAPAQLERARNDERLIA 446 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRA-----------QLQAG 503 + ++ A ++ M+Q+ + T AD + Q AR T +A A L G Sbjct: 447 DALEQTALVDRMKQQTQTTTAAFADAQERYAQ-ARADTTQATNAFFAAQAGILARSLSTG 505 Query: 504 QPCPLCGSTSHP 515 PCP+CGS HP Sbjct: 506 TPCPVCGSKEHP 517 >UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus RepID=SBCC_STAES Length = 1009 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 130/219 (59%), Gaps = 12/219 (5%) Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + +E+++Q + +T+ KL E + I ++ +++ + + ++Q + + ++ Sbjct: 778 LNLEKLRQSIEKTNLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQKEIFL 837 Query: 883 LNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEV 934 L+ ++ K K + L+ ++ ANQ+L+ + G RY L R+ + LE+ Sbjct: 838 LSEILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGLSGLEI 897 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 +V D + ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGFGTLD Sbjct: 898 DVFD-FHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGFGTLDQ 956 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 ETL+TA+D L L +SG+ +G+ISHV +K+RIP+ ++V Sbjct: 957 ETLETAIDTLINLKSSGRMVGIISHVSELKQRIPLILEV 995 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 22/211 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + ++N E IDF E ++ LF I+G TG+GKT + DAI ALY Sbjct: 1 MKPLHIVMENFGPFIKET-IDF--EQVETDQLFLISGKTGSGKTMIFDAIVYALY---GM 54 Query: 61 LSNVSQSQNDLMTR--DTAECLAEV-EFEVKGEAYRAFWSQNRARNQP---DGNLQV--P 112 S ++ + DL + D ++ + +F+V + ++ R P +GN+ Sbjct: 55 ASTKTRKEGDLRSHFADGKSPMSVIYQFKVNNQTFKI------HREAPFIKEGNITKTQA 108 Query: 113 RVELARCADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 ++ + D ++ KV + L G++ +F + +L QG+F FL + K++ Sbjct: 109 KLNIYELVDNQFELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQ 168 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELE 201 +L L +E + +I ++ E K + ++E Sbjct: 169 SILRTLFNSERFDEIRHLLLENVKQEKVQIE 199 >UniRef50_D2B0F9 Exonuclease SbcC n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0F9_STRRD Length = 1291 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 20/169 (11%) Query: 883 LNSLIGSKEGD-----KFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR---------- 926 L +L G D + + G L +V AN++L + G RYLL+ Sbjct: 1113 LAALTGGNSTDNQWNMRLSSYVLGERLRQVVESANERLDHMSGGRYLLEHHLSRSAGDRS 1172 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK---TRIDSLFLD 983 K+ L + ++D W RD TLSGGESF+ SLALAL L+D+V+ + + +LF+D Sbjct: 1173 KSGGGLGLRILDGWTG-VDRDPATLSGGESFVTSLALALGLADVVTAEAGGVELGTLFVD 1231 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 EGFGTLD +TLD LD LD L G+ +G++SHV ++ R+P Q++V+K Sbjct: 1232 EGFGTLDEDTLDGVLDILDGLRDGGRAVGIVSHVAELRTRVPAQLRVRK 1280 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 10/189 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L + S E ++DF + A GLF I GPTGAGKTT+LDA+C ALY P Sbjct: 1 MRPHRLWISAFGSFPAEEEVDF--DALAEAGLFLIHGPTGAGKTTVLDALCYALYGRVPG 58 Query: 61 LSNVSQS-QNDLMTRDTAECLAEVEFEVKGEAYR----AFWSQNRARNQPDG--NLQVPR 113 + ++S + D +A +E ++G + W + + R N + Sbjct: 59 KRDSAKSLRCDHAPPGRGPSVA-LEVTIRGRRLKITRSPAWQRPKLRGTGTTRENEKALL 117 Query: 114 VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 EL + L +V + EL TL G++ +F + +L QG FA FL A ++R +L Sbjct: 118 QELTPSGEWTGLTTRVDEAGELIGTLLGMNAEQFFQVAMLPQGDFAKFLRADGEDRRRVL 177 Query: 174 EELTGTEIY 182 E L IY Sbjct: 178 ERLFSVRIY 186 >UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM6_9GAMM Length = 1025 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 150/563 (26%), Positives = 251/563 (44%), Gaps = 90/563 (15%) Query: 499 QLQAGQPCPLCGSTSHPAVEAYQALEP----------GVNQSRLLALENEVKKLGEEGAT 548 +L+ + CP+CGS HP Y+ P + SR + KK E Sbjct: 508 ELEPDRRCPVCGSQEHPHPATYEGTAPSQVDIDAAQQAHDVSREAVFDARQKKEASESTI 567 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQAL-TQQWQAVTASLNITLQPLDDIQPWLDAQDE 607 R Q + + + + + L DE+ + +Q + AS+ ++ LD+ D Sbjct: 568 ARLQQEMSEFRNELGDYDGSLLDVDEEIIRLKQLEEEKASIEEAVRELDEAISNAD---- 623 Query: 608 HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL 667 E+ LRL + + ++ Q + + + ++E ++ LP E +++ L Sbjct: 624 -EKSLRLKASEDTARKKLDDARQTLARAETRLEDARK-----------ALPAEYRDQANL 671 Query: 668 -ATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQC 726 +T + + + + R+ EL A Q ++ T +S T VLE V C Sbjct: 672 DSTYAEVSTNLEARERELVAAQE------AMITTTDKS-----SSATAVLETA--VKAAC 718 Query: 727 LALHSQQQTLQQQDVLAAQSLQKAQAQFDTA-----LQASVFDDQQAFLAALMDEQTLTQ 781 L+++ + + L +A A+ D A L+A++ D L +DE T Sbjct: 719 --------DLKEELRVVKEGLDEAVAESDFASIEDVLKAALSQDDIDALQQALDEYG-TT 769 Query: 782 LEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE 841 L L L+ A LV + + L Q+ E ++QE + Sbjct: 770 LGVLTGRLKAAETAALGLVVENIDPLLVELQN-----------AESVRQEALGVRNTAHD 818 Query: 842 NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK---FRKF 898 T R + Q+ RQ Q++ + ++ + D G G EG + F +F Sbjct: 819 RTVLLNSCRVAINQE---RQAQESAYA-LYEVVGTLADVGS-----GRVEGTQKLSFHRF 869 Query: 899 AQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADAVRDTRT 950 G LD+++ A+ +L + GR+ L+R+ S + L+++V D + A R + Sbjct: 870 VLGTILDDVLTQASMRLRSMTSGRFELRRRNSASDKRSVAGLDIDVFDEYTGSA-RPATS 928 Query: 951 LSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 LSGGESF+ +L+LAL LSDLV S +D+LF+DEGFG+LD E+L+ A++AL L S Sbjct: 929 LSGGESFMAALSLALGLSDLVQAQSGGIHMDALFVDEGFGSLDPESLEQAIEALIRLRDS 988 Query: 1008 GKTIGVISHVEAMKERIPVQIKV 1030 GK IGVISHVE +K R+ +I V Sbjct: 989 GKMIGVISHVEELKARMDKRIDV 1011 >UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8R3_PAESJ Length = 1030 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 145/582 (24%), Positives = 259/582 (44%), Gaps = 95/582 (16%) Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A L GQPCP+CGS HP K + E R QL Sbjct: 513 AHLHDGQPCPVCGSQEHPG-----------------------KAVAAEAVPSREQLQQAK 549 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ 617 +QL R E E + A W+ A L + + + Q E ++ + L++ Sbjct: 550 EQLSRYERELNEAKLQAAATRSSWEGSAAELA---EYGAEASGLAEQQGELRKRWKQLNE 606 Query: 618 RHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW 677 E G +Q+ Q ++IEQ+ + LL +E+ L QQ Q Sbjct: 607 EAERLGAQVEQGKQLKQRAEEIEQKLEQLL--------------QEKDKLQAEQQ--QIA 650 Query: 678 QQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN----WRQVHEQCLALHSQ- 732 +R + +AL+ ++++ L + P+ EL ++ + E+ W++ + L + ++ Sbjct: 651 VERGAKQSALEKELERIPEELRS-PKQMELRLKQQRSLAESLAAAWKEAQDGLLRMRAKF 709 Query: 733 -------QQTLQQQDVLAAQSLQKAQA--QFDTALQASVFDDQQAFLAALMDEQTLTQLE 783 +QT QQ LA + A A +F+ L + F ++AF A + +Q L+ Sbjct: 710 AEEQAHAEQTEQQ---LAEARVNAALAAKRFEEELAKAEFSSEEAFREAHLPDQERRALK 766 Query: 784 QLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA------QTHQ 837 + + A+ + + + L+ QQ D AL + ++++ + Q Sbjct: 767 EQLEAYNTALAAARKRIEELEQELSGKQQA---DIEALKAAIAELKERIEAATNALQIAS 823 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 + E+ G++R + Q A ++ + ++Q+ + Q ++ L F + Sbjct: 824 RFAEDA---GKLRTAIDQAAAKVKELEAKLEQVLDLYQMLKGDNALKI--------SFER 872 Query: 898 FAQGLTLDNLVHLANQQLTRLHG-RYLLQRK-------ASEALEVEVVDTWQADAVRDTR 949 + L+ ++H AN +L L G +++LQR L ++V D + RD + Sbjct: 873 YILIEYLEQILHAANVRLRHLSGGQFVLQRSDRLETRGKQSGLGLDVYDAYTGQN-RDVK 931 Query: 950 TLSGGESFLVSLALALALSDLVSH---KTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 T+SGGE F SL LAL ++D++ I+ +F+DEGFG+LD ++L+ A++AL L Sbjct: 932 TMSGGEKFNASLCLALGMTDVIQSFQGGVSIEMMFIDEGFGSLDEDSLNKAIEALVDLQR 991 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 SG+ IGVISHV+ +K P ++V K GYS+ ++ AV+ Sbjct: 992 SGRMIGVISHVQELKAAFPATLEVYKTKE-GYSR--TSIAVR 1030 >UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepID=Q897Z0_CLOTE Length = 1045 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 104/178 (58%), Gaps = 21/178 (11%) Query: 867 MQQIAQMTQQV----EDWGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTR 917 +++I ++ +++ +D+ + L GD F ++ D ++ AN +L++ Sbjct: 850 LKEIKKLNEKISEKEDDYKIIGELARISNGDNDERITFERYVLAAYFDEIIAAANIRLSK 909 Query: 918 L-HGRYLLQRKAS-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 + GR+LL RK E LE+EV D + A R +TLSGGESF SL+LAL L+D Sbjct: 910 MTGGRFLLSRKEEKGKGRRQEGLELEVFDNYTGKA-RHVKTLSGGESFKASLSLALGLAD 968 Query: 970 LV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 ++ + +D++F+DEGFGTLD E+LD A++ L L G+ +G+ISHV +KERI Sbjct: 969 VIQSYAGGISLDTIFIDEGFGTLDPESLDNAIETLVELQNGGRLVGIISHVPELKERI 1026 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 99/195 (50%), Gaps = 17/195 (8%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQN----DLMTRD 75 IDFT + +F I GPTGAGKTT+ DAI AL+ E SN ++ ++ D +++ Sbjct: 20 IDFTE--LDNRNIFLINGPTGAGKTTIFDAISYALFGEA---SNTNKDRDGLRSDFASQE 74 Query: 76 TAECLAEVEFEVKGEAYRA--FWSQNRARNQPDGNLQVPRVELARCADGKILADK--VKD 131 T ++EF ++ + Y+ + Q R +++ +G ++G ++ V++ Sbjct: 75 TI-TYVDLEFSLRDKKYKVTRYPQQPRKKSRGEGFTYKNSEAFLILSEGNTVSGVTLVEE 133 Query: 132 KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFE 191 K+ + G++ +F + ++L QG+F L A ER + ++ GTE + + ++ + Sbjct: 134 KI---NEILGINKNQFRQIVMLPQGEFRKLLEADSSEREIIFRKIFGTEHFEKFQKVLDD 190 Query: 192 QHKSARTELEKLQAQ 206 + K ++ K+ + Sbjct: 191 KRKEIYKDIAKVNTE 205 >UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22_SHEPW Length = 1022 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 157/563 (27%), Positives = 262/563 (46%), Gaps = 83/563 (14%) Query: 499 QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITK 558 QL GQPCP+CGS HP + + P Q + L + + E R + +T Sbjct: 502 QLTVGQPCPVCGSAEHPNLAQSEQQLPTEEQLQQAQLAED--QAAEALTQARAKYSGLTT 559 Query: 559 QLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR 618 +LQ A L+Q +Q A +A+L++ QLR Q Sbjct: 560 KLQEQIKVADELKQK----IEQTAADSAALSV-------------------EQLREQQQA 596 Query: 619 HELQGQIAAH-NQQIIQYQQQIEQ---RQQLLLTTLTGYALTLPQEDEEESWLATRQQEA 674 + + A+H QQ+ + ++Q++ ++Q L T L + E E + + Q A Sbjct: 597 LKKLVETASHATQQLARLREQLQTWQVKEQTLRTAL---------DTERERYQGVQTQVA 647 Query: 675 QSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCL------- 727 Q + L A+ + + + + + QS++L ++ + RQ H L Sbjct: 648 TLQGQLEQLLVAIPEQYRTVDSLNSAITQSEQL-FAKQQQSINVIRQSHTNALEQDASAK 706 Query: 728 -ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLK 786 AL S + L Q LA A+ L +S F +QQA + A++ E QL+QL Sbjct: 707 AALVSAEANLSQTTELA----DNAKISLSEQLASSGFSEQQALIQAMLPE---AQLQQLA 759 Query: 787 QNLENQRRQ----AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLREN 842 + NQ +Q Q + Q E L QQ +P+ +E I +L + ++ Sbjct: 760 AEI-NQYQQDCVANQANLAQLHEKL--QQQSKPE--------LEDIAAQLNLLQTEQQQA 808 Query: 843 TTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQ 900 ++ ++ Q + ++Q Q Q+ + G L + + G+K ++F Sbjct: 809 EQEWQALQGRVTQLTNTQKQLNDADSQAKQLEDEYAIVGTLADVANGQTGNKVSLQRFVL 868 Query: 901 GLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADAVRDTRTLS 952 + LD+++ A+++L + GRY L RK A LE+EV D + + VR TLS Sbjct: 869 SVLLDDVLLEASERLQLMSKGRYRLIRKEERAKGNKASGLELEVEDAYTSK-VRPVATLS 927 Query: 953 GGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 GGESF+ +L++AL LS++V + ++D+LF+DEGFG+LD ++LD A+ L L ++G+ Sbjct: 928 GGESFMAALSMALGLSNVVQAYAGGIKLDTLFIDEGFGSLDQDSLDLAVRTLMDLQSAGR 987 Query: 1010 TIGVISHVEAMKERIPVQIKVKK 1032 IGVISHV MKE+I +I + K Sbjct: 988 MIGVISHVSEMKEQIGTRIDINK 1010 >UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1T5_HALOH Length = 1108 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 127/564 (22%), Positives = 254/564 (45%), Gaps = 62/564 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E I+F + GLF I GPTG+GK+++LDAI +ALY Sbjct: 1 MRPLLLKISGLNSFVQEEIINFKK--LTEKGLFGIFGPTGSGKSSILDAITIALY----- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +++ + + ++T E EF + G + + + + + RV LA Sbjct: 54 -GKIARDTKEFINKETGELYVYFEFAM-GSNQKTYCIDRKLKTSDNNGYTTSRVRLAIKE 111 Query: 121 DGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +GK+ + +KV++ + + GL++ F R+++L QGQF+ FL + K+R ++LE + Sbjct: 112 NGKVEEVYEKVREVEDKVEKIIGLNHEDFMRTVVLPQGQFSEFLTLQGKKRRDMLERILN 171 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV--QSLTASLQVLTDEEKQLI 236 E +G+ + E+ + R +++ Q ++ L + E V +SL L L + +K++ Sbjct: 172 LEEFGE---RLMEKLR-LRKNIKESQLKSVETILTSYEDVSEKSLEDILNKLENLKKEIG 227 Query: 237 TAQQQEQQSLNWLTRQDEL---QQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 +++ Q+ N + E+ Q++ + Q+ L E+ + A+ A NL+ Sbjct: 228 YKKKRLQEKRNEYEKYKEVWTRQKQLLKYQEKLDTLEERSERISNLKNKMEQAKKALNLK 287 Query: 294 PHWERIAEHSAALAHIRQQIEEV--------NTRLQSTMALRASIRHHAAKQSAELQQQQ 345 R+ + Q++E + R + S+R K+ +L +++ Sbjct: 288 KDINRLERYHQERKETNQKVENLEKMIVDLREKRDRYNREYEESLR-AKEKELPDLTKKK 346 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR----EHLRQWQQQLTHAEQKLNALAA 401 + ++ +++ + E G + Q D+ E+L++ Q++ +Q++ L Sbjct: 347 LEIKDAIKLYEQNKGIKKEVTGKAEKLKQMVQDKNSLEEYLKRGQEKSRVIKQQIKDLED 406 Query: 402 ITL--TLTADEVATALAQHAEQRPLR--QHLVALHGQIVPQQKR---------------- 441 I + +D T +A +R + Q + + Q + + +R Sbjct: 407 IIEKQVINSDYRKTIMAGLNLERDYKQVQKDIKVINQGIKRLEREIWSLDEKRKDKSGEL 466 Query: 442 -------LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLE 494 L Q + I + + + + N ++ +K +QL D++ E + +I+ L Sbjct: 467 KRIESGILYQYEKIIGDKEKAERELNGQKEKLEDDINKKRKQLEDLEKEIE-DYKIRNLA 525 Query: 495 AQRA-QLQAGQPCPLCGSTSHPAV 517 A +L G PCP+CGST HP V Sbjct: 526 GILAGKLTEGSPCPVCGSTEHPRV 549 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/280 (29%), Positives = 146/280 (52%), Gaps = 37/280 (13%) Query: 763 FDDQQAFLA----ALMDEQTLTQLEQLKQNLE-NQRRQAQTLVTQTAETLAQHQQHRPD- 816 FDD + +L+ E+ +T+ E LK+ +E N R L ++++Q + + Sbjct: 837 FDDVRKYLSWENQIRAWEEEITEFEDLKKEVESNITRLKMEL---NGQSISQERWTKIKA 893 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 D +L + ++Q+EL Q + E ++++L+ N+++++ L +A + Sbjct: 894 DRESLEENLSRLQEELGSCKQTIEE-------LKRKLELKRKNQEKKEELEHDLAVIKD- 945 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL----HGRYLLQRKASEAL 932 +N LI K F + + + L ++A + +RL + RY L+ Sbjct: 946 ------INDLIRGKS------FVEFVAMKQLRYIALEASSRLMEITNNRYKLE--LDNQG 991 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK--TRIDSLFLDEGFGTLD 990 E + D + RD +TLSGGE+FL SL+LAL+LS + K + ++ FLDEGFGTLD Sbjct: 992 EFVICDNYNGGVRRDCKTLSGGETFLTSLSLALSLSSHIQLKGNSNMEFFFLDEGFGTLD 1051 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 LD +++L+ L+ T+G+ISHVE +K R+PV++ V Sbjct: 1052 VNLLDIVMNSLERLHNEHLTVGIISHVEELKNRVPVKLMV 1091 >UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7A6_9ACTO Length = 1002 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 18/143 (12%) Query: 904 LDNLVHLANQQLTRLH----GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLS 952 L+ +V AN TRLH GRY L R A L +E+ D+W R T TLS Sbjct: 849 LEEVVTAAN---TRLHIMSEGRYTLSHSDHQAARGARSGLGLEITDSWTGRP-RKTDTLS 904 Query: 953 GGESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 GGESF SL+LAL L+D+V+H+ +D+LF+DEGFGTLD +TL LD LD+L A + Sbjct: 905 GGESFFASLSLALGLADVVTHEAGGNPLDTLFIDEGFGTLDEDTLHKVLDVLDSLRAHDR 964 Query: 1010 TIGVISHVEAMKERIPVQIKVKK 1032 T+GVISHV ++ RI ++ V+K Sbjct: 965 TVGVISHVPELRRRITHRLHVRK 987 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 24/200 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ +LRL+ G IDF + +++GLF + G TGAGK+T+ AIC ALY + P Sbjct: 1 MRLHTLRLQAFGPFAGTHTIDF--DALSADGLFLLHGDTGAGKSTIFAAICFALYGKPP- 57 Query: 61 LSNVSQSQNDLMTRD---TAECLAEVEFEVKGEAYRAFWSQNRARNQP--DGNLQVPRVE 115 DL+ R A L EV EV R + A+ +P G + + Sbjct: 58 ------GDRDLLLRSHHAPAGLLTEVTLEVTLAGRRLRIDRIPAQMRPKRSGEGETSQKA 111 Query: 116 LARCADGKILAD-------KVKDKLELTATLT---GLDYGRFTRSMLLSQGQFAAFLNAK 165 R ++ + AD K E +T G+ +F + +LL Q +F FL+A Sbjct: 112 ETRLSEWAVDADGQGRWEPSSKSHQEAAVEVTDLLGMSRDQFCQVVLLPQNEFTKFLHAD 171 Query: 166 PKERAELLEELTGTEIYGQI 185 R ELL +L T + I Sbjct: 172 AHGRRELLGKLFRTGRFSFI 191 >UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=SBCC_BACSU Length = 1130 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 173/664 (26%), Positives = 299/664 (45%), Gaps = 111/664 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK ++L +K L+S + E IDF E + G+F I GPTG+GK+++LDA+ LALY + R Sbjct: 1 MKPIALSIKGLHSFREEQTIDF--EGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEA-YRAFWSQNRARNQPDGNLQVPRVELARC 119 +N N + AE V F + ++ + R + D ++V + L R Sbjct: 59 AAN-----NTHGILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTD-EMKV-KTALCRF 111 Query: 120 ADGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K +LADK + + L GL FTR+++L QG+FA FL+ K ER +L+ Sbjct: 112 IEIKDEHTVLADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQR 171 Query: 176 LTGTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L E YG ++ + Q + A ++ A+ SG+ + E V+ + +VL E + Sbjct: 172 LFNLEQYGDRLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQ---AEKVLEQAEAR 228 Query: 235 LITAQQQEQQSLNWLTRQDEL---QQEASRRQQALQQALAEEEKAQPQLAALSL----AQ 287 L ++ Q+ T E+ Q+E S ++ + QP + ++ A+ Sbjct: 229 LEAMRKNRDQAKERFTEHQEIWNVQKEKS----TYEEEEKRLAEEQPHIDSMQKRLLEAE 284 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI-----------RHHAAK 336 A L+P+ +R AE A+ H +Q E+ T Q +A R + R H ++ Sbjct: 285 TAAALKPYADRYAE---AIQH-EEQAEKEQTLAQKDLADRTAFFQQKHEEYEAWRQHKSE 340 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQ-------------TSDREHLR 383 + EL +Q+ L+ + + + E +A Q+ +DR L Sbjct: 341 KEPELLAKQEQLSRLQEIEIKLSEAKQEEERKKADLRQKEEALQSVMNELETVTDR--LT 398 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 + Q + T +Q+L +L +T+DE + Q A + LR + QI ++KR Sbjct: 399 RGQNRQTELKQQLK-----SLQVTSDERKS--CQQAAEMALR--IRQTEEQIKKEKKRSE 449 Query: 444 QLQVAIQNVTQEQT----QRNAALNEMRQRYKEKTQQLADVKTICEQE------------ 487 +L + +Q + +E+ + A N + Q Y E Q + + +CE E Sbjct: 450 ELNLVLQKMNEEKNTLVQKTEAEENNIIQAY-EAVQTVYHL--VCETERSLTRMTEEARK 506 Query: 488 -----------ARIKTLEAQRAQ-LQAGQPCPLCGSTSH-PAVEAYQALEPGVNQSRLLA 534 AR+ L + AQ L AG+PCP+CGST H P+ ++ E + Sbjct: 507 SQHTLHLQREKARVALLTKELAQKLTAGKPCPVCGSTDHDPSASVHETYEADSH------ 560 Query: 535 LENEVKK---LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 LE ++K+ L E A L ++ ++ ++ +E A+ + Q T Q Q + A+ + Sbjct: 561 LEEDIKRTDVLLTEAAALSQEI--LSAKIMLEEQSARFIEQCPFLQTIQAQNLEAAASFE 618 Query: 592 LQPL 595 QP+ Sbjct: 619 HQPV 622 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 5/151 (3%) Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQ 941 L+ L +G+ F +F L+++ A+ +L+ L RY ++ + + D Sbjct: 965 LDKLQAVFKGNTFVEFLAEEQLESVARDASARLSMLTRQRYAIEVDSEGGFVMR--DDAN 1022 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALD 999 R +LSGGE+FL SL+LALALS + + + FLDEGFGTLD + LDT + Sbjct: 1023 GGVRRPVSSLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTVVT 1082 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 AL+ L + +GVISHV+ ++ R+P ++ V Sbjct: 1083 ALEKLQSDNLAVGVISHVQELRARLPKKLIV 1113 >UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clostridium kluyveri RepID=A5N4G0_CLOK5 Length = 1164 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 97/374 (25%), Positives = 177/374 (47%), Gaps = 37/374 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL++K LNS + +IDF E G+F I GPTG+GK+T+LD I L+LY E R Sbjct: 1 MKPISLKIKGLNSFESSQEIDF--EKLTERGIFGIFGPTGSGKSTVLDGITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV---KGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 S+ + + + +F++ K + YR + R+Q G+++ + Sbjct: 59 KSS------NFINVNCNNLYVSYKFQISEKKVKTYRV--EREFRRDQKSGSVRSKTARII 110 Query: 118 RCADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 D KIL + K+ E + GL FTR+++L QG+F+ FL + K+R +LE Sbjct: 111 SIEDNIEKILEEGSKNVTEKCQEILGLKLEDFTRTVVLPQGKFSEFLRLEGKDRRNMLER 170 Query: 176 LTGTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L G + YG +S + ++K + + +L+ Q G + E L+V + KQ Sbjct: 171 LFGLQKYGDNLSFKLNLKNKEEKMKFHELEGQLKGYEGINEE-------ILEVKMMQMKQ 223 Query: 235 LITAQQQEQQSLNWLTRQ--DE-----LQQEASRRQQALQQALAEEEKAQPQLAALSLAQ 287 L + ++ ++ N+L ++ DE LQ E ++ L+ E + + + LA+ Sbjct: 224 LENSYEETKKEYNYLEKKYNDENDLWKLQLELEQKSYELELLTKRENEIKNYEKKIKLAE 283 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI-------RHHAAKQSAE 340 ++P+ + SA + + + +N ++ S + I R K+ E Sbjct: 284 GTLKVKPYADNFKNTSAQIKITKDNLSNLNIKINSIKKNKNEIEILLNEARDKKDKKLPE 343 Query: 341 LQQQQQSLNTWLQE 354 L+ ++Q + ++E Sbjct: 344 LKVKEQKIKDAIEE 357 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 6/154 (3%) Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRT 950 G KF +F L + A++QL + G Y L+ E + D RD T Sbjct: 1008 GKKFVEFIAANQLKYISLEADKQLREITCGNYGLE--VDEDGRFFIRDYKNGGKERDAST 1065 Query: 951 LSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 LSGGE+F+ SLALALALS + K R ++ FLDEGFGTLD L+ +D+L+ ++ Sbjct: 1066 LSGGETFVASLALALALSSQIQLKGRSPLELFFLDEGFGTLDDNLLEIVMDSLEKIHNDK 1125 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKL 1041 +IGVISH+E +KER+PV++ V +G+G SK+ Sbjct: 1126 LSIGVISHLEVIKERMPVKLIVTTAESGMGGSKV 1159 >UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7V414_BACUN Length = 1140 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 118/206 (57%), Gaps = 16/206 (7%) Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 Q + Q +L ENT + I+++ K+ AD ++ ++ W L G Sbjct: 938 QSIGQQKLRLEENTRNIDRIKEE-KERAD-------------RLREEYLKWDRLCRHFGD 983 Query: 890 KEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTR 949 + G FR AQ L L+ AN L RL RY L+ +A +L + + D Q A R Sbjct: 984 ERGKNFRNIAQSFVLKELLAGANFYLQRLTDRYELECQAG-SLTILLRDFHQGGAARPAC 1042 Query: 950 TLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALN-ASG 1008 TLSGGESFLVSL+LAL LS L +D+LF+DEGFGTL S+ L+T +D L+ L+ G Sbjct: 1043 TLSGGESFLVSLSLALGLSSLSRQSLSVDTLFIDEGFGTLSSDYLNTVMDTLEKLHQMGG 1102 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKIN 1034 K +G+ISHVE +KERI QI+V++I+ Sbjct: 1103 KKVGIISHVEGLKERIKTQIQVRRID 1128 >UniRef50_B0NZR4 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZR4_9CLOT Length = 927 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 100/150 (66%), Gaps = 13/150 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEVVDTWQADAVR 946 F +F Q + D ++ AN++L+ + RY L RK S LE+E++D W R Sbjct: 771 FERFVQSVYFDLILAAANERLSVMSEQRYYLLRKEENDINKGSSGLELEILDEWTGKR-R 829 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDA 1003 + R+LSGGESF +L+LAL LSD++ +K ++D++F+DEGFGTLD+++L+ A+ +++ Sbjct: 830 NVRSLSGGESFKAALSLALGLSDVIQNKKGGIQVDTIFIDEGFGTLDADSLNKAMQIINS 889 Query: 1004 LNASG-KTIGVISHVEAMKERIPVQIKVKK 1032 L+ G K +G+ISHV+ +K++I +I+V K Sbjct: 890 LSLEGNKLVGIISHVDELKDQIDQKIEVYK 919 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 127/554 (22%), Positives = 235/554 (42%), Gaps = 105/554 (18%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAEC 79 IDFTR +G+F I+G TGAGKTT+ D IC ALY E + S + D++ D A+ Sbjct: 20 IDFTR---FKDGIFLISGETGAGKTTIFDGICFALYGE----PSGSYRKQDMLRSDFAKD 72 Query: 80 LAEVE----FEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLEL 135 E + F + + Y+ + + R G+ ++ R + +L +D++ Sbjct: 73 ETETKVVFLFSHRKKQYKIERNPSYMRKSKRGD------KMTRQSPYAVLYQ--EDEIVT 124 Query: 136 TAT---------LTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQIS 186 T + + G+D ++ + +++QG+F L AK KER+E+ ++ GT + Sbjct: 125 TGSQQVTAQMEEILGMDRMQYQQISMIAQGEFLKLLYAKGKERSEIFRKIFGTWYLYEFQ 184 Query: 187 AMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSL 246 + +H S + E E L G TLL EQ ++ S +E ++ +Q+ Q + Sbjct: 185 EKIKRRHLSCKYEYENL-----GNTLL--EQEDNIFVSKD--AEEYEEYTRYLKQKHQIV 235 Query: 247 NWLTRQDELQQEASRRQQALQ----QALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 ++ D +++ R+QQ + Q +EE Q Q S +I E Sbjct: 236 EFM---DVVKRYQYRKQQEYENFQKQKETQEELYQKQRIVFS-------------QITEK 279 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 + I+++I+E+ + + A + +I+ E Q Q+ L ++ RF++ Sbjct: 280 RQKIKDIKEEIKELIVQEKENKAEQRAIK-------KEYDQIQKELPKLHKKELRFQELQ 332 Query: 363 NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL----------------NALAAITLTL 406 + +Q + E L + ++ L +A++++ L + Sbjct: 333 KQI--------KQYKELEALEKKKESLKNAKERMIRQQEETEKKKENERQRELKLLEFLR 384 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 ADE+ T H ++ L+ H+ + ++K ++ I E +++ Sbjct: 385 QADEIETQY-DHLQKEELKLHVQTEKNHELCKEKEAYFEKLRIYEEAGE------VYDKI 437 Query: 467 RQRYKEKTQQLAD--VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 R + KE +L+D + C Q + L G PCP+CGS HP ++ E Sbjct: 438 RMQRKEYRDRLSDWQDRYDCNQAGLLAR------NLIDGHPCPVCGSLHHPKTADFK--E 489 Query: 525 PGVNQSRLLALENE 538 + Q L AL E Sbjct: 490 SDITQEMLRALREE 503 >UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT4_9CLOT Length = 1004 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 150/570 (26%), Positives = 256/570 (44%), Gaps = 94/570 (16%) Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G PCP+CGS +HP +A G + E VKKL R D Sbjct: 482 ANLQEGTPCPVCGSKTHPE----KAHCDGA-----VVTEEMVKKL-------RAAFDQAD 525 Query: 558 KQLQRDENEAQSLRQD-EQALTQQWQAVT--ASLNITLQP------LDDIQP----WLDA 604 +R ENE SL E+ Q AV A+ I Q +D+++ W Sbjct: 526 ASFRRKENELGSLNGRLEEKRNQTTAAVMEMAAFTIPDQTAQADVLIDEVRKLHVIWEKR 585 Query: 605 QDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE 664 +E E +LR L + H H +Q+ + + QI++ ++ + Y ++ + Sbjct: 586 TEETEARLRTLEKEHR---SYQEHKRQLGELRLQIKELEETEVRVTEEY------QEADR 636 Query: 665 SWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHE 724 S+ A + AQ Q+ + + + + ++QQ+ + + + ++T + + ++ + Sbjct: 637 SYTAKQAAAAQMRQEIRGDESDILKQLQQVRNEIAEVNR-------KKTEARDTYNKLAK 689 Query: 725 QCLALHS------QQQTLQ-------QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 + AL + + Q +Q ++DVL+A L+ + +T++ Sbjct: 690 ELSALETNLKRDAEDQNMQYRQEWQLEKDVLSA--LETDSGEMNTSVN------------ 735 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 DE + +L N EN Q L Q A + H TV +EQI + Sbjct: 736 ---DESVIQKLPD--SNQENDFADEQELEKQ-AGGYGECYTHFC---TTSTVLLEQISGQ 786 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 + +T +K I ++L N+ L + + + L L + Sbjct: 787 IERTIRKKNSVAIRHDAIAERL---VKNKAAYSKLKKDYGAYLNIYKKYSKLQDLSQAAL 843 Query: 892 GD-KFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK----ASEALEVEVVDTWQADAV 945 G+ K + Q + D ++ AN +L ++ ++ L+R + L++ V+D + Sbjct: 844 GNYKLETYIQEVYFDRIIDSANHRLRQIVCNQFELKRGQKTAGNRGLDLFVLD-HRTGKE 902 Query: 946 RDTRTLSGGESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALD 1002 RD +TLSGGE+F+ SL++AL L+D+VS RID+LF+DEGFG+LDS+ L+ AL+ L Sbjct: 903 RDVKTLSGGEAFVASLSMALGLADIVSANAAGVRIDTLFIDEGFGSLDSDILEQALNVLA 962 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L+ S +G+ISHVE +K RI QI V K Sbjct: 963 ELSESDHLVGIISHVEELKHRIDRQILVTK 992 >UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae RepID=B1HUN1_LYSSC Length = 1026 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 39/304 (12%) Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 QF T++Q + F + + AA +++ TQLE+L++ + Q TL Q +E +H Q Sbjct: 732 QFSTSMQEAGFVSYEDYAAA---KRSATQLEELRRACSDYTLQVHTLKIQISEG-EKHLQ 787 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + + LAL + T + LR + + +QL+Q + Q+ M ++ + Sbjct: 788 GKEEQDLAL----------MEATVKSLR---IAYEDAFKQLQQIDGFVKSCQSFMNKVEE 834 Query: 873 MTQQV----EDWGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTRL-HGRY 922 +++ + G + L G G F ++ Q LD + AN +L L +G++ Sbjct: 835 TERELRLLESEAGRVKELYGLLNGQNSKKLSFERYIQINYLDQITEAANIRLNHLSNGQF 894 Query: 923 LLQRK-------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH-- 973 L+R L ++V D + D +RD +TLSGGE F SL+LAL ++D++ Sbjct: 895 ELRRSDRLEKHAKQSGLGLDVYDAY-TDQLRDVKTLSGGEKFNASLSLALGMADVIQSFQ 953 Query: 974 -KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 I+++F+DEGFG+LD E+L+ A+D L L SG+ IGVISHV +K +P + V+K Sbjct: 954 GNIHIETMFIDEGFGSLDEESLNKAIDTLIDLQDSGRMIGVISHVPELKSAMPAVLHVEK 1013 Query: 1033 -ING 1035 +NG Sbjct: 1014 TLNG 1017 >UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=B8HAV6_ARTCA Length = 1025 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 12/140 (8%) Query: 904 LDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGE 955 L+ + A+++L + GRYLLQ R A L +EVVD W RDT TLSGGE Sbjct: 871 LEQVAIAASERLVAMSDGRYLLQHTDAKAARGAKSGLGLEVVDQWTGH-RRDTSTLSGGE 929 Query: 956 SFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 SF+ SL+LAL L+D+V S I++LF+DEGFG+LD ++L+ +DAL+ L G+ +G Sbjct: 930 SFMASLSLALGLADVVQQESGGVEIETLFVDEGFGSLDEQSLEQVMDALEGLRDGGRVVG 989 Query: 1013 VISHVEAMKERIPVQIKVKK 1032 ++SHV MK+RI Q++V K Sbjct: 990 LVSHVGEMKQRIGTQLQVLK 1009 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 18/256 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LR+ G +DF R + +GLF + GPTGAGKT++LDAIC ALY P Sbjct: 1 MRIHHLRISGFGPFAGTEDVDFDR--LSGHGLFLLNGPTGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA----FWSQNRARNQPDGNLQVPRVEL 116 + + E +EF +G + W + AR + Q + L Sbjct: 59 ARQDGKRLRSDHAEPSQEPAVNLEFSAQGRRFEVTRSPAWDKPSARGRNGFTTQQAKTLL 118 Query: 117 ARCADGKILADKVKD---KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DG + ++ E+TA L G+D +FTR ++L QG FAAFL +K +R ELL Sbjct: 119 RERVDGTWVEKSARNDEAGAEITALL-GMDRDQFTRVVMLPQGDFAAFLRSKAADRLELL 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 ++L GT+ + + + + +AR + L Q + LLT + +S ASL++ D Sbjct: 178 QKLFGTQRFEALEQELSREALAARESVAALSGQ---LELLTA-RAESEAASLELAEDS-- 231 Query: 234 QLITAQQQEQQSLNWL 249 A + + L WL Sbjct: 232 --APAADKAAERLEWL 245 >UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis RepID=Q830T3_ENTFA Length = 1045 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 185/645 (28%), Positives = 301/645 (46%), Gaps = 134/645 (20%) Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQA---------GQPCP 507 +Q L+E+ QR+ + QQ + +EA+++T ++Q A LQ G+PCP Sbjct: 466 SQNQGELHELTQRFAVEQQQKSA------EEAKLQTKKSQWASLQIQRLSLLLEEGEPCP 519 Query: 508 LCGSTSHPAVEAYQAL---EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 +CGS HP + +Q + E + L +E V++ E + L + QLQ E Sbjct: 520 VCGSLEHPKQQTHQEVSLEEIDQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQ--E 577 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPL--DDIQPWLDAQDEHE--RQLRLLSQR-- 618 EA + EQ Q A L + L L + P A+ E + ++ + ++Q+ Sbjct: 578 QEAAYTEEQEQLAAQ-----FADLQLPLTGLTFSQVTPAEIAEVESQLAKEKQQIAQKLT 632 Query: 619 ---------HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL-A 668 EL+ Q+A ++Q+ +QQ+E QQ L +T+ Q+ L A Sbjct: 633 EISVEKDHLAELEEQVAENSQRFEVLRQQVETMQQSL------ERITIQQQMIASQLLDA 686 Query: 669 TRQQEAQSWQQR--QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQC 726 T E + QQ Q EL+A + + + +T ETL + E ++LE+ Sbjct: 687 TVTYEEMTKQQTLLQEELSAFERQKENVTTQGETLKK--------EEMILEST------L 732 Query: 727 LALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ---LE 783 L +QQTLQQ AQ ++ L A ++ EQ +T+ E Sbjct: 733 THLEKEQQTLQQ-----------TVAQLESQLNA------------VLTEQGVTEDQLTE 769 Query: 784 QLKQ--NLENQRRQAQTLV---TQTAETLAQHQQHRPDDGLA----LTVTVEQIQQELAQ 834 LK+ LE+Q+ Q TQ LA+ ++ D +T +EQI Q++ + Sbjct: 770 WLKEVPTLESQQEQIALFEQEQTQLTIQLAEIEKKLSSDTFPELSLITTEIEQITQQIEE 829 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI-AQMT---QQVEDWGYLNSLIGSK 890 +K QL + N QQ L+Q+I AQ T + E+ L L + Sbjct: 830 QEKKYY-----------QLHEKMQNNQQ---LVQEINAQRTTIEDKFEEVAALQQLADTV 875 Query: 891 EGDK-----FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQ-------RKASEALEVEVV 937 G+ F ++ L+ ++ +ANQ+L RL + RY + + LE+ + Sbjct: 876 NGNNPKKISFERYMLQTYLERVLTVANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIY 935 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETL 994 D + VR TLSGGESF+ +LALAL+L++++ + ID+LF+DEGFG+LD E L Sbjct: 936 DD-NSGTVRSAHTLSGGESFIAALALALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEAL 994 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 + A++AL+ + G+ IG+ISH+ +K RIP Q+++K NG G S Sbjct: 995 EMAMEALETIENEGRMIGIISHIGELKARIPQQLQIKS-NGNGQS 1038 >UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri L37603 RepID=C4WAQ8_STAWA Length = 1009 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 66/150 (44%), Positives = 96/150 (64%), Gaps = 19/150 (12%) Query: 899 AQGLTLDNLVHL---------ANQQLTRLHG-RYLLQRKAS-----EALEVEVVDTWQAD 943 +Q LTL+N V + AN +L + G RY LQR+ + LE++V D + ++ Sbjct: 847 SQKLTLENYVLIYYLEKIIAQANLRLATMSGQRYQLQRREALSQGFSGLEIDVFDFY-SN 905 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 R +LSGGE+F SLALAL LS++V S + S+F+DEGFGTLD ETL+TALD Sbjct: 906 KARHISSLSGGETFQASLALALGLSEIVQQESGGISLQSMFIDEGFGTLDQETLETALDT 965 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKV 1030 L L ++G+ +G+ISHV +K+RIP+ ++V Sbjct: 966 LVNLKSTGRMVGIISHVSELKQRIPLILEV 995 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 140/652 (21%), Positives = 264/652 (40%), Gaps = 123/652 (18%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L+L N E IDF N LF I+G TG+GKT + DAI ALY E Sbjct: 1 MKPMMLKLNNFGPFLNET-IDFRN--IDQNQLFLISGKTGSGKTMIFDAIVYALYGEA-- 55 Query: 61 LSNVSQSQNDLMTR--DTAECL-AEVEFEVKGEAYRAFWSQNRARNQP---DGNL-QVP- 112 S ++ +NDL + D + EFE+ + ++ R P +GN + P Sbjct: 56 -STKNRKENDLRSHFADGNSAMQVTFEFELNDKLFKI------VRTGPFVKEGNTTKTPA 108 Query: 113 RVELARCADGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 ++ + + + + V + L G++ +F + +L QG+F FL + KE+ Sbjct: 109 KLNVFEYIENEFDLRESMVNAGNQFIIDLIGVNAEQFRQLFILPQGEFKKFLLSNSKEKQ 168 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 +L L +E + +I + E K+ EK+Q + + ++ L + + Sbjct: 169 GILRTLFNSERFEEIEKRLNENVKN-----EKIQIEER------YKNIERLWNDIHTFEN 217 Query: 231 ---EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ-----------QALQQALAEEEKA 276 EE + I Q ++ + L R +E ++ R++ + ++Q L + ++ Sbjct: 218 NDLEELKSINVHQTDKIN-EVLHRFNEFGEKIGRKKYEQKKSHENEIEKVEQKLNDNKEL 276 Query: 277 QPQLAALSLAQPA-RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 + L L + + L+ + I +H A L I + I+ ++ L A ++ A Sbjct: 277 ESNLNELKKNENELKQLKQNESFINQHRAKLNKINE-IKPLSQLLDRNEAANKKLKQ--A 333 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQ----TSDREHLRQWQQQLTH 391 ++S E+ S+N L+E + E Q S+Q ++++L + + Sbjct: 334 EKSIEIAVH--SINNLLKEKE-------ENQLGLNQLSEQEESINKEKDYLEKTNTFYNN 384 Query: 392 AEQKLNA------LAAITLTLTADEVATALAQHAEQRPLRQ------HLVALHGQIVPQQ 439 Q LN+ L++ + L ++ H+ L I + Sbjct: 385 LSQYLNSYKEKERLSSQLVNLNEKSELVERELLELNEAIKSKEINYSHVEQLSQDIFNIE 444 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT----ICEQEARIKTLEA 495 K + Q + ++N Q + + N+ LN+ + Y +K ++ D+ I + E + E Sbjct: 445 KEIEQAE-KLKNDMQIKEELNSKLNDTKASYNQKCIEIDDLSNKLYEIDKTEINLNNKET 503 Query: 496 QRAQLQ----AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG 551 QLQ G CP+CG NE+ LG+ Sbjct: 504 LVEQLQQVVSLGDTCPICG--------------------------NEITSLGQ-----HI 532 Query: 552 QLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLD 603 D+I K+ +N QSL++D + + +SLN + +++I ++D Sbjct: 533 DFDSINKK----QNLIQSLQEDLNKMNINKAKLESSLNHLTEQINNI--YID 578 >UniRef50_A6DE82 Exonuclease SbcC n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE82_9PROT Length = 665 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 94/266 (35%), Positives = 144/266 (54%), Gaps = 23/266 (8%) Query: 781 QLEQLKQNLENQRRQAQT-------------LVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 QL LK+NLE + +T + + E+L + + + +D L+L Sbjct: 398 QLNFLKENLEKNEKLLKTKEINIAKIEERLNTLNKEIESLNEVEGKKEED-LSL------ 450 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 +++E+ KL E +G +++K + + L ++ ++ +QV LN I Sbjct: 451 LEKEIKNLETKLDEIKKDEGIFEERIKHIKQKIDEYKKLKKEYEELNRQVNLLKILNDEI 510 Query: 888 GSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVR 946 GS G KF A G +DNL+ AN+ L RL + RY L K E LE E++D + R Sbjct: 511 GSANGSKFVNKALGFLIDNLIFEANKILNRLSNNRYSLSIK--EKLEFEIIDHFIGATKR 568 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 D TLSGGESFLVSL+L+LALS++ +D++FLDEGFGTLD ++L L L +L Sbjct: 569 DINTLSGGESFLVSLSLSLALSEISKSSVSLDTMFLDEGFGTLDKDSLSEVLSLLQSLAI 628 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKK 1032 K IG+ISHVE ++ +P +I ++K Sbjct: 629 GEKMIGIISHVELLQSEMPDKIIIQK 654 >UniRef50_D1PQD3 SbcC exonuclease family protein (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD3_9FIRM Length = 219 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 92/148 (62%), Gaps = 11/148 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA------LEVEVVDTWQADAVRD 947 F ++ Q D +V AN + TR+ G+Y L R+ SEA L+++V D + R Sbjct: 61 FEQYVQAFYFDGVVEAANLRFTRMTDGQYRLLRRKSEAVGGKTALDLDVFDAYTGK-TRP 119 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +LSGGESF+ +L LAL +SD + + I++LF+DEGFGTLDS++L+ A+D L L Sbjct: 120 VGSLSGGESFMAALCLALGISDTIQQNAGGVTIETLFIDEGFGTLDSDSLEKAVDTLAGL 179 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKK 1032 K IGVISHVEA++ R+ QI+V K Sbjct: 180 AGGDKLIGVISHVEALQSRLTRQIRVTK 207 >UniRef50_C1CWL8 Putative Exonuclease sbcCD, subunit C n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWL8_DEIDV Length = 911 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 21/214 (9%) Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 Q+ +EL T +L+ G + +Q + + ++ + Q A+ ++++ W +L Sbjct: 699 QVSRELTATEAELQNAREQAGRLAEQERALHERLGRKAEIETQAAEAGRRLDTW---QTL 755 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTR----LH----GRYLLQRKASEALEVEVVD 938 G+ + ++F+++ L + Q LTR LH GRY L + E + V D Sbjct: 756 TGTLKANEFQQYL-------LAEVEAQLLTRAGILLHEISDGRYRLALASGEYV---VQD 805 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTAL 998 W A VR +TLSGGE+FL SL+LA+ALSD ++ + +LFLDEGFGTLD + L+ Sbjct: 806 LWNAGEVRGVKTLSGGETFLASLSLAIALSDYLAGNKILGALFLDEGFGTLDPQALEAVA 865 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 AL+ L G+ +GV++HVE++ ER+P ++ V K Sbjct: 866 GALENLRTQGRMVGVVTHVESLSERLPSRLLVTK 899 >UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJS0_THEYD Length = 1031 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 161/304 (52%), Gaps = 27/304 (8%) Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 +Q+++ A+ L+ + + D + A++ ++DE+T L+ + E + +A Sbjct: 742 KQKEIKASLDLKAKEMRIDVSELAAI----------ILDEETKKSLKNTVEEFEKEFNKA 791 Query: 797 QTLVTQTAETLAQH--QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLK 854 + + + L + + +PD+ +++ ++ +A+T+ K+ ++ G +++Q++ Sbjct: 792 KGALDNILKNLEEIPIKAIQPDE-------LQETEKFIAETNDKIAQSNEKLGTLKEQIR 844 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 ++ D +++Q L ++I M + E+ L +L KE KF F+ L L +V L N Sbjct: 845 KEKDMLKEKQLLSKEITLMENEFENVKLLKNLTYGKEMVKF--FSWQL-LKEIVKLTNGI 901 Query: 915 LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV-SH 973 L L GR + LE V D + R TLSGGE+F+VS ALALALS + S Sbjct: 902 LRTLIGRRF-SINVNPNLEFTVSDLL-YNKERSVNTLSGGETFIVSFALALALSSYIQSK 959 Query: 974 KTR-IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 + R I F+DEGF +LD E LD+ L+ L + + +G+ISH+E +K+ IP I +K+ Sbjct: 960 RMRAIQFFFIDEGFSSLDRELLDSVCAVLNELKSQDRLVGLISHIEELKQVIPNSINIKR 1019 Query: 1033 -ING 1035 I G Sbjct: 1020 DITG 1023 >UniRef50_Q9RT44 Nuclease sbcCD subunit C n=2 Tax=Deinococcus RepID=SBCC_DEIRA Length = 909 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 114/214 (53%), Gaps = 21/214 (9%) Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 Q+ ++L + L G + +Q +Q D ++ + Q A+ +Q++ W LN+ Sbjct: 697 QVSRDLTASDAALSTAREQAGRLAEQERQLRDKLTRKADIETQAAEAGRQLDTWQTLNNA 756 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL--------HGRYLLQRKASEALEVEVVD 938 + E F++F L + Q LTR GRY L E + V D Sbjct: 757 LKVNE---FQQFM-------LAEVEAQLLTRAGLLLFDISDGRYRLSLDKGEYV---VQD 803 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTAL 998 W A VR +TLSGGE+FL SL+LA+ALSD ++ + +LFLDEGFGTLD + L+ Sbjct: 804 LWNAGEVRAVKTLSGGETFLASLSLAIALSDYLAGNKVLGALFLDEGFGTLDPQALEAVA 863 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 AL+ L G+ +G+++HVE++ ER+P ++ V K Sbjct: 864 TALENLRTQGRMVGIVTHVESLSERLPSRLLVSK 897 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 16/197 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ + + +DF A LFA+ GPTG+GK++LLDA+ ALY ET R Sbjct: 1 MKPLHLTLRGFTAFRQTTDLDF-----ADLELFALVGPTGSGKSSLLDAMTFALYGETAR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L + + L+++ + FE G+ YR ++ R R Q D +++ R++ Sbjct: 56 LG--ATGLDALISQGERTLSVALTFEAGGQTYRV--TRTRGRKQADNEVRLDRLD----P 107 Query: 121 DGK---ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 DG+ + + KD + + GLD+ FTR ++L QGQFAA L+ KP++R ELL ELT Sbjct: 108 DGEWTGLSSGSQKDIAQRIEDVVGLDFDTFTRCVMLPQGQFAALLHGKPRQRQELLGELT 167 Query: 178 GTEIYGQISAMVFEQHK 194 G Q+ +Q K Sbjct: 168 GMGRVQQMQTFAADQVK 184 >UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC54_WEIPA Length = 1068 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 12/132 (9%) Query: 920 GRY---LLQRKASEA----LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 GRY L R+A A L++++ D +R T TLSGGESF+ +L++AL+++++V Sbjct: 934 GRYQFILSDRQAGRANQNGLDIDIYDQ-DGGKIRATSTLSGGESFIAALSIALSMAEIVQ 992 Query: 973 HKT---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 H+ +ID+LF+DEGFG+LD +TL A++AL + SG+ +G+ISHV +MK++IP Q+ Sbjct: 993 HRAGGAKIDALFIDEGFGSLDEQTLSQAMEALSMVEQSGRLVGIISHVTSMKQQIPQQLA 1052 Query: 1030 VKKINGLGYSKL 1041 VKK+ G G SKL Sbjct: 1053 VKKL-GNGRSKL 1063 >UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. BH72 RepID=A1K1W2_AZOSB Length = 1023 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 14/158 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA-------SEALEVEVVDTWQADAVR 946 F+++ LD+++ A+ +L + GRYLLQR+ + L++EV+D + A R Sbjct: 865 FQRYVLAALLDDVLRAASLRLKAMSRGRYLLQRREEVADARRAAGLDLEVLDDYTGRA-R 923 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 TLSGGE F+ SL+LAL LSD+V + ++D+LF+DEGFG+LD E+LD A+ L Sbjct: 924 PVATLSGGEGFMASLSLALGLSDVVQAYAGGVQLDTLFIDEGFGSLDPESLDMAMRTLID 983 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 L G+ +GVISHVE MK++I V I+V + G+ S++ Sbjct: 984 LQRQGRMVGVISHVEEMKQQIDVAIEV--VQGVRGSRV 1019 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 97/197 (49%), Gaps = 21/197 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ G +IDFT P LF I+GPTGAGKT++LD I ALY +T Sbjct: 1 MKPLKLSLQAFGPFAGREEIDFTLLP--EGALFLISGPTGAGKTSILDGITYALYGDT-- 56 Query: 61 LSNVSQSQNDLMTRDT-AECLAEVEFE--VKGEAYRAF------WSQNRARNQPDGNLQV 111 S +S ++ + A L EVEFE + YR + RA DG ++V Sbjct: 57 -SGGERSAREMRSHHADAALLTEVEFEFALGARRYRVRRVPEQERAAQRATKSGDGLVKV 115 Query: 112 -PRVELARCADGKI----LADKVKDKL-ELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 R EL R D + LA K + ELTA L G +F + +LL QGQF L A Sbjct: 116 LARAELHRLDDDGVTWLPLAHKTTEVTSELTA-LLGCQAEQFRQVVLLPQGQFRKLLTAS 174 Query: 166 PKERAELLEELTGTEIY 182 ER ++LE L GT Y Sbjct: 175 SGEREKILETLFGTAAY 191 >UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6LS35_CLOB8 Length = 1163 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 150/304 (49%), Gaps = 23/304 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E IDF + G F I GPTG+GK+T+LD I LALY Sbjct: 1 MRPIKLRIKGLNSFMDEQIIDFDK--LTDRGFFGIFGPTGSGKSTILDGITLALY----- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 NVS+ ++ + + EF++ G R + + + DG + + ++ Sbjct: 54 -GNVSRKSSNFINTNCDRLNVNFEFQISGSEIRKYIIDREFKRKKDGGISSGKCKIVEVT 112 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 ++ +ILAD VK + + GL+ F+R+++L QG+F+ FL + K+R ++LE L Sbjct: 113 SSEEEILADGVKTINKKVEEIVGLNLEDFSRTVVLPQGKFSEFLKLEGKDRRDMLERLFN 172 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD------E 231 + +G +S + + RT+ L Q SG + ++ E+++ +L+ L + + Sbjct: 173 LQQFGDNLSRKLSAKISKERTDSNILAGQLSGYSDVSQEKLKEKENALEELKNNLEALKK 232 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN 291 E +I + +E + + W + D L ++Q L++ +EE + + L + Sbjct: 233 ELDIIEKKHKENEEI-WKLQLDLLY--YKNKEQTLKE---KEENINSYIEKIKLGEAGAK 286 Query: 292 LRPH 295 + P+ Sbjct: 287 VLPY 290 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 114/206 (55%), Gaps = 27/206 (13%) Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 + ++LK + ++Q+ L+ + ++ ++ G L L K +KF + + + L Sbjct: 967 VDEELKNIKNKLEEQKDLLDKKMKLEHKLALLGDLEKLF------KGKKFVEFVAVSKLK 1020 Query: 909 HLANQQLTRL----HGRYLLQRKASEALEVE------VVDTWQADAVRDTRTLSGGESFL 958 +++ + RL HG Y LEV+ + D A RD+ TLSGGE+FL Sbjct: 1021 YVSVEASKRLKEITHGNY--------GLEVDDNSRFIIRDYKNGGAKRDSTTLSGGETFL 1072 Query: 959 VSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 SL+LALALS + K ++ FLDEGFGTLD + L+ +++L+ ++ +G+ISH Sbjct: 1073 ASLSLALALSAQIQLKGTAPLELFFLDEGFGTLDDDLLEVVMNSLERIHNEKLKVGIISH 1132 Query: 1017 VEAMKERIPVQIKVKKI-NGLGYSKL 1041 VEA+K R+PV++ + +G+G SK+ Sbjct: 1133 VEAIKNRVPVKLMITPAESGMGGSKV 1158 >UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHS1_9FIRM Length = 1067 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 167/328 (50%), Gaps = 43/328 (13%) Query: 729 LHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLK-- 786 L QQ+T+ V + + +QK + ++ F+D++++ + M E+ L + EQ Sbjct: 748 LEGQQKTVSASVVQSQEEVQKKIRSYKQIIKEQGFEDEESYHSQCMTERELEEAEQWIGA 807 Query: 787 -----QNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT-----VEQIQQELAQTH 836 Q LE R TL+ Q E ++ + + +A + +E+I++E + H Sbjct: 808 YQKELQELEANR----TLLEQQLEG----KERKDTEQIAREIKEASGELEEIRKEYMKLH 859 Query: 837 QKLRENTTSQG-EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF 895 NT + EIR LK++ + Q + + +++ +L GS + D F Sbjct: 860 -----NTNERNREIRDNLKRNFEKNSGLQKQYEIVGNLSKTAN-----GNLSGSAKLD-F 908 Query: 896 RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEV-----VDTWQ--ADAVRD 947 + Q ++ AN++L R+ G +++Q + E L + +D + D VRD Sbjct: 909 ETYIQRQYFRQIIRAANKRLVRMTSGEFIMQCRDVEKLGSQGQAGLDLDVYHMATDTVRD 968 Query: 948 TRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +TLSGGESF+ +L++AL LSD+V + +D++F+DEGFG+LD + D A+ L+ L Sbjct: 969 VKTLSGGESFMAALSMALGLSDIVQNTAGAIHLDTMFIDEGFGSLDDVSRDQAIRVLNDL 1028 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKK 1032 + IG+ISHV +KE+I ++ VKK Sbjct: 1029 ADKDRLIGIISHVNELKEQIDHKLVVKK 1056 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 18/196 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+ + L + S G+ +IDFT P NGLF ITG TGAGKTT+ DAI ALY T Sbjct: 1 MRPVKLIMSAFGSYAGKTEIDFTEIP---NGLFLITGDTGAGKTTVFDAITYALYDRTSG 57 Query: 60 --RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--------FWSQNRARNQPDGNL 109 R N+ +SQ + E F + + Y+ + A P Sbjct: 58 GTRDGNMMRSQ---YAGEETSTYVEYTFLYQKKEYKIRRNPEYLRLGKRRYADGSPRYVK 114 Query: 110 QVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 + P+VEL DG I K ++ + + + GLD +FT+ +++QG+F L A+ +ER Sbjct: 115 ETPKVELT-LPDGSIFKGKKRETDQKISEIIGLDADQFTQISMIAQGEFLKLLLAESRER 173 Query: 170 AELLEELTGTEIYGQI 185 ++ + T Y +I Sbjct: 174 KKIFSRIFQTRFYYRI 189 >UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacteraceae RepID=B0K215_THEPX Length = 1180 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 11/239 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E IDF E GLF I GPTG+GK+T++DAI L++Y + PR Sbjct: 4 MRPLKLKIAGLNSFVEEQIIDF--ELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPR 61 Query: 61 LSNVSQSQNDLMTRDTAECLA-EVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 S++ + T+ T+ L + E V G R +N R+ G + L Sbjct: 62 -----NSKDFINTQSTSMSLTYQFEIGVDGARKRYIVERNVKRDAKSGGYKTTLARLREI 116 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + ++LA+K ++ + L GL FTRS++L QG+F+ FL KER ++LE + Sbjct: 117 GESGERVLAEKDREVQQKIVDLIGLTAEDFTRSVVLPQGKFSEFLKLTGKERRDMLERIF 176 Query: 178 GTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 G E YG ++ + + + L ++ A+ S +T E ++ L ++L +EEK L Sbjct: 177 GLEKYGSKLLVRIRDVKREKSNLLNEVNAKLSQHEGVTKEALEDLKKKFEILKEEEKTL 235 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 142/639 (22%), Positives = 283/639 (44%), Gaps = 85/639 (13%) Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ-LQAGQPCPLCGSTSHPAV- 517 N + E+ ++ K K L +VK E+ + + + A+ L+ G PCP+CGS H + Sbjct: 542 NNEIKEIEEKLKNKNNSLEEVKKDIEELVK-NNMAGELAEGLKEGVPCPVCGSIHHVRLA 600 Query: 518 ------------EAYQALEPGV--NQSRLLALENEVKKLGEEGATLRGQLDA---ITKQL 560 E LE + QS+L L+ E+ + + + + D I K + Sbjct: 601 QKVEEDLIKEKQEIKANLEKDIMDYQSKLFKLKGELSGIEVKEEMYKKEYDKLWDILKDI 660 Query: 561 Q--RDENEAQSLRQD----EQALTQQWQAVTASLNITLQPLDDIQPWLDAQ--------- 605 + E E + D ++ L ++W L ++ L + + LD + Sbjct: 661 NLLKLEEELNKMESDFIQWKEKL-EKWNKSKEGLETLIKKLKEEKASLDLEHTRLKEGIN 719 Query: 606 ------DEHERQLRLLSQRH-ELQGQIAAHNQQ--IIQYQQQIEQRQQL------LLTTL 650 E E L +S + EL+GQ+ ++ I +++++E+ Q L + Sbjct: 720 KDISLLKEFESSLEAISITYSELEGQLRISREELGISDFKEKVEEINQKEREIEGLRNEI 779 Query: 651 TGYALTLPQEDEEESWLATR---------------QQEAQSWQQRQNELTALQNRIQQLT 695 + T+ + ++ L+ ++++++ ++RQ E +L + + Sbjct: 780 ENFKNTIEELTNKKETLSNNLNALSIRKGQIEEIGKEKSKNLRERQQEFDSLSEG-RDIE 838 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ-QTLQQQDVLAAQSLQKAQAQF 754 L+ + + E E+V+ E + + + S++ + +D+L ++++ Sbjct: 839 EYLKEIQYNKEKITKMESVLKETLEKARKDKQNIESKKISACKSRDLLNNMFREQSEKLE 898 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 + L+ D ++A L L+D + + ++E+ +N EN+ + + E L + + Sbjct: 899 NALLEKGFKDKKEA-LEYLLDSENIKKIEEEIKNFENEYVSVNKSIDRLMEILKGQKINE 957 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 + Q+++ + Q L E G + + +N Q+ + +Q ++ Sbjct: 958 EE--------WNQLEESIKGLEQVLNEKRKEIGATEKAISDMQENLQKVEEFTKQKKELE 1009 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALE 933 + V+ L++L +G+KF F L + A+++L + GRY L+ + Sbjct: 1010 RVVDILNELDNLF---QGNKFVDFIAARQLKYITFFASKRLKEISRGRYALEIDSDNNFV 1066 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDS 991 + D + R TLSGGE+FL SL+LALALS + K R ++ FLDEGFG+LD+ Sbjct: 1067 MR--DDFNGGVRRSVDTLSGGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFGSLDA 1124 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 E LD + +L+ L +G+ISHV+ +K R+PV++ V Sbjct: 1125 ELLDIVMTSLERLKKDKMVVGIISHVDELKGRVPVKLIV 1163 >UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP6_9FIRM Length = 1023 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 88/214 (41%), Positives = 129/214 (60%), Gaps = 23/214 (10%) Query: 839 LRENTTSQGEIRQ-QLKQDADN--RQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK- 894 LRE++ ++ +R Q +Q A + R+Q L Q A++T L+ L K G + Sbjct: 806 LRESSAAETVLRSWQKRQKALDALREQSGELTQTYARITG-------LSELASGKTGSRV 858 Query: 895 -FRKFAQGLTLDNLVHLANQQLTRL-HGRYLL---QRKASE---ALEVEVVDTWQADAVR 946 F+ + LD+++ +ANQ+L + G+Y L QR+ + L++E+ D + A R Sbjct: 859 SFQTYVLHSLLDDVMEMANQRLLIMSRGQYELHAGQRQRANQQGGLDMEIFDHYSGYA-R 917 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 TLSGGESFL SLALAL L+D+V + R+D++F+DEGFGTLDSETLD AL AL Sbjct: 918 PLATLSGGESFLASLALALGLADVVQACAGGVRLDTMFIDEGFGTLDSETLDVALKALFE 977 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 L SG+ IG+ISHVE ++ RIP +++V K G Sbjct: 978 LQKSGRLIGIISHVEELRSRIPARLEVTKTKSGG 1011 >UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE Length = 1018 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 185/689 (26%), Positives = 304/689 (44%), Gaps = 98/689 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ IDF E N LF I GPTG+GKT++LDAIC ALY ET Sbjct: 1 MKPIKLTMQAFGPFAKTEVIDF--EKLGRNPLFLINGPTGSGKTSILDAICFALYGETT- 57 Query: 61 LSNVSQS---QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-NLQVPRVEL 116 N Q + DL +D + +EF + G+ YR S + + G + V + Sbjct: 58 -GNERQGIQMRCDLSAQDLPTEVV-LEFSLHGKQYRVVRSPEQEAPKARGEGMTVKKHTA 115 Query: 117 ARCADG---KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 A G K++ K + + GL+ +F + M+L QG+F L A KER E+ Sbjct: 116 ALYELGETEKLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIF 175 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 +L T+IY +I L+ +AS ++ E + +LQV Sbjct: 176 GQLFQTDIYKKIEYA--------------LKDKASAISKAKDEFDNQIRGALQVAG---- 217 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQA----LQQALAEEEKAQPQLAALSLAQPA 289 ++++Q+ L T Q E+ + +++QA L A +E +KA+ S + A Sbjct: 218 --VSSEQELLHQLEQATEQLEVDR---KKEQASLDKLNVAKSELQKAETINGEFSKREQA 272 Query: 290 RN-LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 N L+ H EHS ++ +QQ+E N + + + L +A Q+ EL+Q+ +L Sbjct: 273 ENALKLHL----EHSDSIKVRQQQLE--NAKNANKIELPYVALQNAKTQTQELRQKIVAL 326 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 L D+ E + + + L Q Q QL + KL A + +TA Sbjct: 327 KESL---DKANAVTKEKENLQQSAKEAAAKVPQLTQLQYQLESMKDKLVEKANLERKITA 383 Query: 409 D-----EVATALAQHAE------------QRPLRQHL--VALHGQI---VPQQKRLAQ-- 444 + L Q+ E Q+ L Q VAL G I + Q++RL Q Sbjct: 384 GHQQKQQFEATLKQYIELKDKLAFQAQQGQKDLEQARVDVALVGSIDAEIKQKQRLLQDL 443 Query: 445 -----LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 L + + +T + +L E QRY + QQ AD + A+ L AQR Sbjct: 444 QKLHGLTLELSKLTALTVSKQQSLQEASQRYMQ-CQQAADTIELKWHNAQAAVL-AQR-- 499 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+AG+ CP+CGS +HP + + +E V + ++ A + ++ L QL+ Sbjct: 500 LKAGEACPVCGSQAHPNLATF--VEEVVTKEQVQAARVKEREAQTSLNQLSNQLEQHNVV 557 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQD--EHERQLRLLSQ 617 + + +N+ L+++ L + + +++ LQ L+D L + D + E+ + L+Q Sbjct: 558 IIQHQNQIDQLKEE---LGEHAASEISTVQTELQALNDQLLRLQSIDIEKLEKNVEQLNQ 614 Query: 618 R--------HELQGQIAAHNQQIIQYQQQ 638 R HELQ Q+AA N+ +Q Q+ Sbjct: 615 RCLVGENKIHELQNQMAA-NESTVQANQE 642 >UniRef50_A1SK70 Putative exonuclease n=1 Tax=Nocardioides sp. JS614 RepID=A1SK70_NOCSJ Length = 881 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 17/166 (10%) Query: 883 LNSLIGSKEGD-----KFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQ----RKASE-- 930 L S + K D + + L +V AN +L + RY L+ R A E Sbjct: 706 LCSFVEGKSADNRLQMRLSAYVLAYRLSQVVTAANARLGAMSDQRYSLEHTGRRGAGETR 765 Query: 931 -ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGF 986 L + V D W ++ RD TLSGGE+F+VSLALAL L+D+V+ + +D+LF+DEGF Sbjct: 766 GGLSLLVRDDWSGES-RDPATLSGGETFVVSLALALGLADVVTQEAGGADLDTLFVDEGF 824 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 G+LD++TLD + LD+L G+ +GV+SHV M++RIP Q+ V K Sbjct: 825 GSLDADTLDDVMGTLDSLRDGGRVVGVVSHVAEMRDRIPAQLVVTK 870 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 7/181 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + +DF + + GLF ++G TG+GKT++LDA+C ALY + P Sbjct: 1 MRLHHLEITAFGPFADTVAVDF--DELSGAGLFLLSGATGSGKTSVLDAVCFALYGDVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + ++ +E + G +R S + R + G + V +A Sbjct: 59 DRSTARRLRSDQAAPGVRPEVTLEATLSGRRFRIVRSPSWERPKKRGAGLTTEQASVSIA 118 Query: 118 RCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 DG + + ++ + L L G++ +FT+ +L QG+F AFL A+ +ER LL++ Sbjct: 119 ERIDGGWVTHSTRLDETGHLVTRLVGMNTDQFTQVAMLPQGRFQAFLRARSEERHRLLQQ 178 Query: 176 L 176 L Sbjct: 179 L 179 >UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella amazonensis SB2B RepID=A1S519_SHEAM Length = 1020 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 150/299 (50%), Gaps = 30/299 (10%) Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 A+A+FDT L A F+D +F A M T + K + ++Q L + A Sbjct: 724 AKARFDTELAAKGFNDVVSFNQARM---TADDMGDAKSRIATWQQQLAGLKERMAAQQES 780 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQK---LRENTTSQGEIRQQLKQDADNRQQQQTL 866 P D L Q Q +Q+ L + R QL +A+ Sbjct: 781 LGDVLPPDLTELAALETAAQDGFNQCNQQWQVLNDTQVMYSRARAQLGTEAEV------- 833 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYL 923 A++ ++ G L+ G + ++F G+ LD+++ A+++L R+ GRY Sbjct: 834 ---AARLDEEYAVVGTLSDAASGMTGARISLQRFVLGVLLDDVLIEASERLHRMSKGRYR 890 Query: 924 LQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SH 973 L R+ +A L++EV D + +R TLSGGESF+ +L+LAL LSD+V + Sbjct: 891 LLRREDKAKGNRASGLDLEVEDAYTGK-LRPVATLSGGESFMAALSLALGLSDVVQAYAG 949 Query: 974 KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 ++D+LF+DEGFG+LD ++L+ A+ L L +SG+ IGVISHV MKE+I ++ + K Sbjct: 950 GIKLDTLFIDEGFGSLDQDSLELAVRTLVDLQSSGRMIGVISHVTEMKEQIQTRVDIHK 1008 >UniRef50_UPI0001912546 exonuclease subunit SbcC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001912546 Length = 98 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 62/92 (67%), Positives = 70/92 (76%) Query: 208 SGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQ 267 SGV LL EQ+Q L ASLQ LTDEEK+L+ QQ +QQ L+WLTR++EL E RQQAL Sbjct: 1 SGVALLADEQLQQLEASLQALTDEEKRLLADQQGQQQHLHWLTRKNELHTELHARQQALY 60 Query: 268 QALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 A EKAQPQLAAL+LAQPAR LRPHWERI Sbjct: 61 AAQEAREKAQPQLAALTLAQPARQLRPHWERI 92 >UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteobacteria RepID=Q07GQ2_ROSDO Length = 1019 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 31/297 (10%) Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 AQ+ KAQA+F L + D + F A D + Q + L++ + + + Q Sbjct: 716 AQAFTKAQAEFTERLGTAGLD-EAGFKVAKAD---VAQSDALEEQINSFNERVAANKAQL 771 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELA---QTHQKLRENTTSQGEIRQQLKQDADNR 860 A + P D ALT E Q +L QTH +L+ + ++ E ++++ Sbjct: 772 ARLANEISNRSPPDVEALTAAKESAQTKLETSQQTHIRLQRDLEAKFETQRKVA------ 825 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR--KFAQGLTLDNLVHLANQQLTRL 918 L +IA + + G L L+ K R FA D ++ ANQ+L + Sbjct: 826 ----ALSIRIAALEAEYGPVGGLADLVNGNNERKVRLPDFAIAAMFDEVLVAANQRLGPM 881 Query: 919 -HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 GRY L R + L++ V D + R T+TLSGGE F SLALAL LSD+ Sbjct: 882 TGGRYQLLRPEDAVGGRQKRGLDIAVFDA-NTEKSRPTKTLSGGEGFQASLALALGLSDV 940 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 V S ++D++F+DEGFGTLD +TL+TAL+ L L +++G+ISH E +K I Sbjct: 941 VQQNSGGIKLDAIFIDEGFGTLDEDTLNTALETLYELTNDKRSVGLISHTEQVKSMI 997 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 25/201 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + G ++FT A G+F I G TGAGKTT+ D I AL+ ++ Sbjct: 1 MRPIRLTMTAFGPYAGTEVVEFTAALDA--GIFGIYGETGAGKTTIFDGISFALFGQS-- 56 Query: 61 LSNVSQSQNDLMTRDT-AECLAEVE--FEVKGEAY--RAFWSQNRARNQPDG-------- 107 S +S D++ A + +VE F++ E Y + Q RA + G Sbjct: 57 -SGAERSAEDMVCHHAHATDITKVELVFDLGDERYVVQRVPKQQRAALRGSGTTTEPHQA 115 Query: 108 ----NLQVPRVELARCADGKILADKVKDKL--ELTATLTGLDYGRFTRSMLLSQGQFAAF 161 + +P E+A G I+A+K +++ E+ A L G + +F + +LL QG F Sbjct: 116 YLFRSTGMPLAEIAGDNLGDIVAEKQVNRVDPEIEA-LLGYNAAQFRQIVLLPQGDFRKI 174 Query: 162 LNAKPKERAELLEELTGTEIY 182 L A ER+ +L+ L ++Y Sbjct: 175 LTAPSDERSPILKRLFDVQLY 195 >UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV5_PETMO Length = 1039 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 162/302 (53%), Gaps = 34/302 (11%) Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQT--LTQLEQLKQNLENQRRQAQTLVTQTA 804 ++ A+ +FD ++ F +QQ + ++ EQ + LE Q + + + QTL+ Sbjct: 743 VKNAEQKFDQMVEKMGFKNQQEY--KILKEQINLIETLEDEVQKYKEELKNKQTLLIDLE 800 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 E+ + + D + ++Q+Q+E+ + ++ T + EI+ LK N Sbjct: 801 EST---KNLKKIDETPIANEIDQLQKEIEEL---IKNETNLEYEIKH-LKGTKTN----- 848 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTRL- 918 L I ++ +Q +++ + +L +GD K+ + ++ AN +L +L Sbjct: 849 -LETVIKEIEKQEKEYSTIKNLRDVSKGDNNTRISLSKYVLAYYFEEILAQANLRLNKLT 907 Query: 919 HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 GRY L R + SE LE+ V D + R+ +TLSGGESF +LALAL L+D+V Sbjct: 908 DGRYHLHRSSKVLDARKSEGLEIMVFDIYTGKE-REIKTLSGGESFKAALALALGLADVV 966 Query: 972 SHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 + +D++F+DEGFG+LD+ +LD+A++ L LN++G+ +G+ISHV +KERI +I Sbjct: 967 QSEAGGISLDTIFIDEGFGSLDTNSLDSAIEVLTELNSTGRMVGIISHVSELKERIKSKI 1026 Query: 1029 KV 1030 +V Sbjct: 1027 EV 1028 >UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK1_9FIRM Length = 1012 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 12/186 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ ++L+ + K E IDFTR +F I+GPTG+GKTT+ DAI ALY E PR Sbjct: 1 MKVRKVKLRGFLTYKDEVTIDFTR--LFDKKIFLISGPTGSGKTTIFDAISFALYGEVPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-----RVE 115 + ++D ++ D ++EF + Y+ R +Q L+ P RVE Sbjct: 59 EIAMEDLRSDYLSEDDDFTYVDLEFSLADRVYKIV----RIPSQRAVELKNPKNIGHRVE 114 Query: 116 LARCADGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 L K ++ADK+K+ E L GLD +F++ MLL+QGQF FL +K E+A LL Sbjct: 115 LYDITGEKTLIADKIKEVDERIKDLVGLDKNQFSKVMLLAQGQFQKFLISKSDEKAALLS 174 Query: 175 ELTGTE 180 ++ T+ Sbjct: 175 DIFKTD 180 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 85/335 (25%), Positives = 164/335 (48%), Gaps = 29/335 (8%) Query: 713 TVVLENWRQVHEQ-CLALHSQQQTLQ---QQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 T +++ + H+ LA+ Q+ +L + A + L+ Q F+ L+ F++ +A Sbjct: 671 TTFIKDKEKAHQDLVLAISKQKASLAALIENIAKANEDLKTYQKDFEDKLKEK-FENLEA 729 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 ++A L E L + L + + +T T E + + P+D ++++ Sbjct: 730 YMAYLSREGELKAQKDLVETYFTDLAREKT----TKENFSFFKDKAPEDLFKFEDDLKEV 785 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL-NSLI 887 +E+ + L ++ I +K+D ++ +++ Q V + L N Sbjct: 786 TREI----KVLDDDKIKLSTILNSIKKDEGKIKKIHASYLSLSKTAQIVSNLSDLANGQT 841 Query: 888 GSKEGDK---FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEV 936 G +G + F F + D +++ AN + ++ G++ + RK + L++++ Sbjct: 842 GGVKGLERLDFETFILSVYFDRVLNFANLRFNQMTDGQFSMVRKTEAVDARSKMGLDIDI 901 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSET 993 +D+ R TLSGGE+FL SL+LAL LSD + + RID+LF+DEGFGTL E Sbjct: 902 LDSNTGKK-RPASTLSGGENFLASLSLALGLSDEIGAENGGIRIDTLFIDEGFGTLSKEF 960 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 L A++ ++ L+ + +G+ISHV+ +K+ I +I Sbjct: 961 LANAIETIEKLSKENRFVGLISHVDELKDAIEAKI 995 >UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R7R6_ARTAT Length = 1004 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/140 (44%), Positives = 89/140 (63%), Gaps = 12/140 (8%) Query: 904 LDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGE 955 L+ + A+++L + GRY LQ R A L +EVVD W RDT TLSGGE Sbjct: 851 LEQVATAASERLVAMSDGRYTLQHTDAKAARGAKSGLGLEVVDEWTGQR-RDTSTLSGGE 909 Query: 956 SFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 SF+ SL+LAL L+D+V + I++LF+DEGFG+LD + L+ +DAL+ L G+ +G Sbjct: 910 SFMASLSLALGLADVVQQEAGGVDIETLFVDEGFGSLDDQALEQVMDALEGLRDGGRVVG 969 Query: 1013 VISHVEAMKERIPVQIKVKK 1032 ++SHV MK+RI Q++V K Sbjct: 970 LVSHVGEMKQRITNQLQVVK 989 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 143/554 (25%), Positives = 232/554 (41%), Gaps = 72/554 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L ++ IDF + ++ GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLDIEAFGPFATPQHIDF--DHLSAQGLFLLNGATGAGKTSILDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA----FWSQNRARNQPDGNLQVPRVEL 116 + AE EF +G + W + AR + Q + L Sbjct: 59 ARQEGKRLRSDHAAPGAEPRVVCEFSARGRRFEVTRSPAWDRPSARGRNGFTTQQAKTLL 118 Query: 117 ARCADGKILADKVKDKLELTATLT---GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 G +K E+ A L+ G+D +FTR ++L QG FAAFL +K +R ELL Sbjct: 119 RERVAGS-WEEKSSRNDEVGAELSDVLGMDREQFTRVVMLPQGDFAAFLRSKANDRLELL 177 Query: 174 EELTGTEIYGQISA-MVFEQHKSARTELEKLQAQASGVTLL----TPEQVQ-----SLTA 223 ++L GT+ + + +V + ++AR +Q AS + LL EQ Q + T+ Sbjct: 178 QKLFGTQRFEAVERQLVHQAAEAARA----VQENASELKLLLDRVASEQDQLGLPAADTS 233 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ--PQLA 281 + +E + A + + W RQ+E + S + ++ +EK+Q +L Sbjct: 234 AAGTEPGQEPEAWLAGVEAEVEAEWKRRQNEAAEAESLSSRLMEHFQEAQEKSQRHGRLG 293 Query: 282 A-------LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNT---RLQSTMALRASIR 331 A L LA P R L + E + +H A A + Q+E V++ +L + A A +R Sbjct: 294 AAMQRRVLLELAAP-RALE-NKEMLGKHRRA-AVLSGQLEAVDSAARKLHTASARAAGLR 350 Query: 332 HH-------AAKQSAELQQQQQS---LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREH 381 AAK + L+ + S L L E R A R + + EH Sbjct: 351 EKLDAAGLDAAKPTIALETVKASCAVLEARLPEEQRLEGITVRLAARRGELA------EH 404 Query: 382 LRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 L + T +Q ++A+ L + L A+Q R+ ++V R Sbjct: 405 LSAAEAAATVVDQLREEVSAVELEI------QPLEPLADQLAEREREATAAAELVGIVAR 458 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 A + +T + +A ++RQ++ DV+ + A L+ Sbjct: 459 HATAASELDVITGKHLHARSASQDLRQKW-------LDVRELRLA----NAAGELAAALE 507 Query: 502 AGQPCPLCGSTSHP 515 +G+PC +CGS HP Sbjct: 508 SGKPCAVCGSEEHP 521 >UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 Length = 966 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 184/624 (29%), Positives = 273/624 (43%), Gaps = 87/624 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ + +DF+ LFAITGPTG+GK+TLLDAI ALY + PR Sbjct: 1 MRPLRLELEGFGPYRERQAVDFS-----DVELFAITGPTGSGKSTLLDAIAFALYGQVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA-RC 119 V + L A+ + F V YR R+R++ G+ +V +E R Sbjct: 56 ---VGRQVGTLKHPAAAKAWVSLTFRVGERVYRV----ERSRSEKRGDARVYLLEGGERL 108 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D L + V L A L GLDY FTR++LL QG+F FL +PKER +LL EL Sbjct: 109 LDLPTL-EAVNRAL---ADLVGLDYEAFTRALLLPQGEFDRFLKGEPKERRQLLLELF-- 162 Query: 180 EIYGQISAMVFEQHKSART------ELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 ++S + + K+A E +L+ + +G++ TPE ++ L+ + Sbjct: 163 ----ELSRLERARQKAAERRGLLLEEKGRLEGELNGLSAATPEALE----ELERALAASR 214 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA-----LSLAQP 288 ++E + + + E E RR+QAL L E KA+ + A LS A+ Sbjct: 215 AEAARLEEEARGVRKALAEAEALLEDLRRRQALAARL-EALKARAEEMARVEERLSRAEE 273 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 A P W + AAL + +EE RL++ A R A S E ++ Q+ Sbjct: 274 AERALPLWRDYQKKRAALQATEKALEEAEGRLRALEA-----RREALGFSPEALERAQAA 328 Query: 349 NTWLQEHDRFRQ-WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT 407 Q+ F PAG +A S Q +L + L AL A L L Sbjct: 329 YAEAQDLKAFEALLARAPAG-KAPASGPDPA-----TAQARLEEVLKALEALGAELLRLR 382 Query: 408 A-DEVATAL-AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 A E AL A+ A + + L L + ++ R A+ +A++ E + AL Sbjct: 383 AWAEAWEALRAKEAALAEVGEALARLEAE--GKEAREARDALALRLKEAEAHALSQALKA 440 Query: 466 MRQRYK--EKTQQLADVK--TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH-----PA 516 + K EK Q+ D + + +E R+ L A L+ G+PCPLCG H P Sbjct: 441 LEAERKALEKAQEDLDRRREALLREERRLGLL-AYHDLLEPGKPCPLCGGVVHALPPLPE 499 Query: 517 V-----------EAYQAL---------EPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 V E QAL E G +RL ALE E + E L+G L+A Sbjct: 500 VPDLAGARRALEEEAQALARRLARLEAEAGDLAARLRALEVEPRPGDPE--ALKGALEAA 557 Query: 557 TKQLQRDENEAQSLRQDEQALTQQ 580 +LQ + Q+LR + +AL ++ Sbjct: 558 EARLQDLRDRYQALRGEARALERE 581 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 8/209 (3%) Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 VE +++ LA+ +L E +G + ++++ + +++ + +A++ ++ W Sbjct: 755 VEALRKALAELEGRLEEKRKEEGALEDRVERLRKDLARRREVEGALARLVAELALW---E 811 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVEVVDTWQAD 943 L + F + GL +LV A++ L L G RY R A++ E VVD W Sbjct: 812 KLALDLQAHNFPAYLLGLKQRSLVERASELLYTLSGGRY---RFAAQGDEYLVVDLWAEA 868 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 R RTLSGGESFL SLALALALS+ + ++++LFLDEGFGTLD E L+ L++ Sbjct: 869 TARQVRTLSGGESFLASLALALALSE-ELSRGKLEALFLDEGFGTLDPEALELVAGILES 927 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L G+ +GV++HVEA+ ER P +++V+K Sbjct: 928 LPTRGRLVGVVTHVEALAERFPARLRVRK 956 >UniRef50_D0MI39 SMC domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI39_RHOM4 Length = 1019 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 290/1108 (26%), Positives = 477/1108 (43%), Gaps = 178/1108 (16%) Query: 1 MKILSLRLKNLNSLKGEWK--IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET 58 M ++LRLKN S GE +DF E F + ++G G GK+ LLDAI AL+ E Sbjct: 1 MVPVALRLKNFMSY-GEAAPVLDF--EQFQ---VACLSGNNGQGKSALLDAITWALWGEA 54 Query: 59 PRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAY----RAFWSQNRARNQPDGNLQV--P 112 + S+ + L+ + E F+++G+ Y R S + ++ + LQV P Sbjct: 55 RKTSDSRKPDEHLLRVGAQQMEVEFTFDLEGQRYCVLRRYTRSSSGKTSKSELELQVYEP 114 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 R + A V + E L GLDY F + L QG+ F KP ER E+ Sbjct: 115 ETGTYRA----LTASSVSETQERLNQLLGLDYQTFINASFLLQGRADEFTRKKPSERKEI 170 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L + + Y +++ + E+ + A+ E+++ Q + E+ +L + L + Sbjct: 171 LARILNLDRYERLAELAREEVREAKARAEQIERQLEQIQEALQEES-ALKTRHEALRERR 229 Query: 233 KQLITAQQQEQQSLNWLTRQD----------------------ELQQEASR------RQQ 264 L ++ Q+ L L Q LQ+E R Q Sbjct: 230 HALEAERETRQRHLQTLQEQRVRLEENRRRLEELQEQERQQTARLQEERERLVRLEAELQ 289 Query: 265 ALQQALAE-EEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 L+Q LA EE Q +L + R L E+ L ++ ++E + L+ Sbjct: 290 DLEQLLARREEIEQAHARERTLQEERRQLEAKREQYWGIQKQLDQVQSELERQRSELEKK 349 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 +AL K+ +Q+Q Q L T LQE R Q R + ++ L Sbjct: 350 LAL-------VRKEQEHVQRQLQELTTRLQERPRIAQRLKAAEQARQEMAR-------LE 395 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQI-----VPQ 438 Q +QQ + E+++ ++ L A Q+ L L +L Q+ VP+ Sbjct: 396 QQRQQRSALEEEIRHVSETLL--------------AAQKELEGQLRSLQRQLEQEADVPE 441 Query: 439 QKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ-QLADVKTICEQEARIKTLEAQR 497 Q LA L+ + + Q Q R AL E +R KE Q + A ++ + +AR++ LE Q+ Sbjct: 442 Q--LAALEARCRELEQ-QEARYRALQEELERLKETGQGKKAAIEAL---QARLQELERQQ 495 Query: 498 AQLQ---------AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 LQ CP+CGS P EV++ EE Sbjct: 496 QDLQQRYDTFRQAEADVCPVCGSELGPEHR------------------EEVERHYEE--- 534 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA-VTASLNITLQPLDDIQPWLDAQDE 607 QL+ + + L +L Q+ +AL QQ+ A ++ + + P + A+ + Sbjct: 535 ---QLEELARGLDEGRRRLAALEQEREALRQQYIARLSEAKRLEKAP----EELARARAQ 587 Query: 608 HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL 667 E R ++R L Q++A Q+ Q EQR++L L +P ++++ L Sbjct: 588 LEELQRRNARREALARQLSALQTQLEQRAFAQEQRRRL--EELHRKLEAIPFDEQKFEVL 645 Query: 668 ATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCL 727 + EA S ++R EL LQ R + L L Q ++ +RQ +Q Sbjct: 646 RQQAAEAASLRERLQELETLQGRRESLESEQRRLAQLEQ-----------QYRQELDQGP 694 Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQA-QFDTALQASVFDDQQAFLAALMDEQTLTQLEQL- 785 AL QQ LQ++ L +K QA FD A V Q L AL D Q+ +L Sbjct: 695 AL---QQLLQRKRALQ----EKLQAIGFDPARLQQV----QQELEALGD--VGAQVHRLL 741 Query: 786 --KQNLENQRRQAQTL---------VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 ++NL+ R++ +TL + +T Q + +D + E+ +Q+LA Sbjct: 742 HAEENLKKGRQERETLQRRIRQEEQALERLQTQLQQLRQELEDLPRVQAACEEARQQLAA 801 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 T + LR GE + +++Q R Q++ L Q++ + + +L G K G Sbjct: 802 TEEALRGVQQEIGECQARMEQLQALRAQRKQLRQELESVRHRERLHRHLQQAFG-KHGIP 860 Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGR---YLLQRKASEA----LEVEVVDTWQADAVR 946 Q TL L AN+ L RL GR YL ++A ++ ++++ T + A R Sbjct: 861 SLIIEQ--TLPELEARANELLERLTDGRMHVYLRTQRAKKSGGTKETLDIIITDEQGAAR 918 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKT--RIDSLFLDEGFGTLDSETLDTALDALDAL 1004 T SGGE+F V AL LAL+ L++ ++ R+ +L +DEGFGT D + L ++A+ A+ Sbjct: 919 PYETFSGGEAFRVDFALRLALAQLLAERSGVRVRTLVIDEGFGTQDPQGLQHLVEAIQAV 978 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKK 1032 + I VI+H+ +K+ PV+I+V+K Sbjct: 979 QSDFDKILVITHLSELKQVFPVRIEVEK 1006 >UniRef50_C0EE11 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE11_9CLOT Length = 939 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 5/208 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+LSL+L K E ++DF+ +F I+G TGAGKTT+ DA+C ALY ET Sbjct: 1 MKLLSLKLSAFGPFKTEQQLDFS--CLEGADIFLISGDTGAGKTTIFDAVCFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP--RVELAR 118 +++ + +C E+ FE G YR S + + + G+ + EL Sbjct: 59 GRKNTRTLKSDFAPPSQQCFVELTFESNGRVYRIQRSPEQLKPKRGGDYTTVSHKAELL- 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK + + + K + + GLD G F++ ++L QGQF L K ++ E+ G Sbjct: 118 LPDGKAVTNLKQIKELIETEIIGLDCGNFSKIVMLPQGQFQKLLTEKSSDKTATFREIFG 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQ 206 TEI+ +++ +FE+ ++ + + L AQ Sbjct: 178 TEIFQKLTGKLFERTRTTEQQNQTLLAQ 205 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 14/183 (7%) Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 NR++ + L Q+ +MT+++ D G + KF D ++ AN +L+R+ Sbjct: 754 NRRKSEQLEQEY-RMTKRLTDLAR-----GGVKRMSLEKFVLASYFDEIIAFANLRLSRM 807 Query: 919 HG-RYLLQRKA---SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH- 973 G RY + R S+ L++EV D + +R TLSGGE+FL SL+L+L L+D+VS Sbjct: 808 SGSRYRMSRITRADSDGLDIEVFDNYTG-RMRHVSTLSGGETFLASLSLSLGLADVVSQH 866 Query: 974 --KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 ++ ++ +DEGFG+LDSE L+ A+D L +L G+ +G+ISHV ++ERI ++ + Sbjct: 867 AGGIQLSTMLIDEGFGSLDSEALNLAIDCLTSLQNGGRLVGIISHVPELRERIQAKLIIS 926 Query: 1032 KIN 1034 K N Sbjct: 927 KGN 929 >UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus aureus RepID=SBCC_STAAC Length = 1009 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 15/188 (7%) Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSL--IGSKEGDK---FRKFAQGLTLDNLVHLAN 912 +N + Q+++ I + Q+++D + L I S + +K F LD ++ AN Sbjct: 810 NNINKTQSIVSHINYLNQELKDQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQAN 869 Query: 913 QQL-TRLHGRY-LLQRKASE----ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 +L T RY L++R+A LE++V D ++ R +LSGGE+F SLALAL Sbjct: 870 LRLATMSDNRYQLIRREAVSHGLSGLEIDVFD-LHSNKSRHISSLSGGETFQSSLALALG 928 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 LS++V S ++S+F+DEGFGTLD ETL+TALD L L ++G+ +G+ISHV +K R Sbjct: 929 LSEIVQQQSGGISLESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNR 988 Query: 1024 IPVQIKVK 1031 IP+ ++VK Sbjct: 989 IPLVLEVK 996 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 54/359 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+L N E +IDF++ +N LF I+G TG+GKT + DA+ AL+ + Sbjct: 1 MKPLHLKLNNFGPFLKE-EIDFSK--IDNNELFLISGKTGSGKTMIFDAMTYALF---GK 54 Query: 61 LSNVSQSQNDLMTR--DTAECLA-EVEFEVKGEAYRAFWSQNRARNQP---DGNLQV--P 112 S + +NDL + D + ++ EF++ Y+ R P +GN Sbjct: 55 ASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKV------HRQGPYIKEGNTTKTNA 108 Query: 113 RVELARCADGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 + ++ DGK I KV + L G++ +F + +L QG+F FL + +E+ Sbjct: 109 KFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFLISNSREKQ 168 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQAS---------------GVTLLTP 215 +L L +E + I ++ E+ K + ++E Q G+ + Sbjct: 169 GILRTLFDSEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDDNIKGLLEVAT 228 Query: 216 EQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 +Q+ L ++ +L K+++ + + +++ ++ E+ ++ + L+ + + K Sbjct: 229 QQIDKLIENIPLLQARSKEILASVNESKET---AIKEFEIIEKKTLENNILKDNINQLNK 285 Query: 276 A----------QPQL----AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL 320 QP++ A L L Q NL + E + +A+ ++ I + N ++ Sbjct: 286 NKIDFVQLKEQQPEIEGIEAKLKLLQDITNLLNYIENREKIETKIANSKKDISKTNNKI 344 >UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A34 Length = 1019 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 90/152 (59%), Gaps = 12/152 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVEVVDTWQADAVR 946 + F G + ++ AN +L +L R+ L R + ++ LE+ V D + + R Sbjct: 860 YETFVIGTYFEEIIDAANIRLKQLTANRFTLNRQKEIVKGRNNQGLELTVFDKY-THSTR 918 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDA 1003 D TLSGGESF SL+LAL LSD++ K++ +D +F+DEGFGTLDSETL A+D L Sbjct: 919 DATTLSGGESFQASLSLALGLSDVIQTKSKGIKLDMMFIDEGFGTLDSETLGVAVDTLME 978 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 L + IG+ISHVE +K +I Q++V N Sbjct: 979 LKQDERLIGIISHVEELKNKISTQLEVIPTNN 1010 Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + + + +IDF + +F I+GPTGAGKT + DAI ALY E Sbjct: 1 MRPIKLVMSAFGPFREQVEIDFN--GLKNKNIFMISGPTGAGKTVIFDAISFALYGEG-- 56 Query: 61 LSNVSQSQNDLMTRDTAE----CLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 S ++ +L+ D EFE+ Y+ + + L + + Sbjct: 57 -SGNNRKNEELLISDYTTNGILTFVNFEFEINKTNYKLIRYPEQKNTEKKCVLYIENEQ- 114 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 D + +K+++ L GL +F + ++L QG+F FL KE+ E+ ++ Sbjct: 115 -PITDILTVTEKIEEIL-------GLSKDQFKQIVMLPQGEFNKFLTTNTKEKIEIFRKI 166 Query: 177 TGTEIYGQI 185 GT+++ I Sbjct: 167 FGTQLHHAI 175 >UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8RJV9_9CLOT Length = 991 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 47/309 (15%) Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT----LVTQTAETLAQHQQ-------- 812 +++AFLA L E+ + E+ + + AQ L + AE A+ ++ Sbjct: 677 EKKAFLAGL--EKAFKEAEESYNRISRRVSDAQARLEALRGRMAEKDAEGRESVGEDRDP 734 Query: 813 -HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL---KQDAD--------NR 860 + PD L + V + + L +++EN Q E R++L +Q+ NR Sbjct: 735 VNGPDTMLPGGMDVRTVMERL---EARMQENRLRQSEARERLTGLEQEKSRLHHRLETNR 791 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSL-------IGSKEGDKFRKFAQGLTLDNLVHLANQ 913 ++ + +Q A M + ++W ++ +L +G KE +AQ + ++ AN Sbjct: 792 MARERISEQKASMEEIQKEWTWVKALSDTAAGEVGGKEKITLETYAQMAYFERIIARANT 851 Query: 914 QLTRLHG-RYLLQR------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 + + G +Y L+R + L + V+D + R +TLSGGESF SL+LAL Sbjct: 852 RFMVMSGGQYELKRCTEEDNRGKNGLGLNVIDHYNG-TERSVKTLSGGESFQASLSLALG 910 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 LSD + + R+D+LF+DEGFG+LD +TL+ A+ +L L + +G+ISHV +KER Sbjct: 911 LSDEIQSAAGGIRLDTLFVDEGFGSLDEDTLNLAMKSLGDLAEGRRLVGIISHVGELKER 970 Query: 1024 IPVQIKVKK 1032 I QI V K Sbjct: 971 IQHQIVVVK 979 >UniRef50_A5Z5M9 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5M9_9FIRM Length = 934 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 152/295 (51%), Gaps = 48/295 (16%) Query: 782 LEQLKQNLENQ-RRQAQTLVTQTAETLAQHQ-------------QHRPDDGLALTVTVEQ 827 LEQL++ LE Q R+ A++ + Q L++ + + DD A T++ Sbjct: 632 LEQLREKLEFQSRKDAESNLNQLKINLSELENKATQALNSYDKCKKSIDDANA---TIKT 688 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA------------QMTQ 875 I+++L + E S+ Q+ K+ +N++ ++ +I ++ Sbjct: 689 IEEQLKDSKNYDLEQLISESNKLQEEKKAVNNQRNDVSIRIEINTGALENIKTNLNKLVT 748 Query: 876 QVEDWGYLNSL-------IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR- 926 E + ++N+L I K + Q + +++ AN + ++ +G+Y L+R Sbjct: 749 TEEKYKWVNALAQTANGNINGKSKIALETYVQISYFERIINRANLRFMKMTNGQYELKRS 808 Query: 927 ------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRI 977 ++ LE+ V+D + RD RTLSGGESF SL+LAL LSD + + +I Sbjct: 809 TESDDQRSKTGLELNVIDHYNGTE-RDVRTLSGGESFKASLSLALGLSDEIHCAAGGIKI 867 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 D+LF+DEGFGTLD ++L++A++AL+ L + +G+ISHV+ +K RI +I V K Sbjct: 868 DTLFVDEGFGTLDEDSLNSAIEALNTLTEGDRLVGIISHVQELKTRIDRKIIVSK 922 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 12/184 (6%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAEC 79 IDF E + GL+ ITG TGAGKTT+ DAI LY ++ + S + Sbjct: 20 IDF--EKLGNKGLYLITGDTGAGKTTIFDAITYVLYGKSSGKTRSSSMLRSKYAKPDVPT 77 Query: 80 LAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADK---VKDKLELT 136 ++EFE + + Y +N +P + + + A I DK V +T Sbjct: 78 FVKMEFEYRNKKY--VIERNPEYERPKIHGEGTTTQGANAT--LIYPDKDTPVTGSSNVT 133 Query: 137 AT---LTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQH 193 L GLDY +FT+ +++Q F L A ER ++ ++ T Y ++ + ++ Sbjct: 134 VAINELIGLDYEQFTQIAMIAQNDFLKLLLADTDERRKIFSKIFNTYPYEKLQLKLGDEA 193 Query: 194 KSAR 197 K R Sbjct: 194 KRLR 197 >UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I3_9CLOT Length = 1044 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 94/151 (62%), Gaps = 12/151 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVEVVDTWQADAVR 946 F ++ ++++ AN + +++ R+ L RK + L++EV D + + R Sbjct: 886 FERYVLAAYFEDIIEAANIRFSQMTCNRFELLRKEELGDKRKGQGLDLEVFDNYTGKS-R 944 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 D +TLSGGE F SL++AL L+D+V S ++D++F+DEGFGTLD E+LD+A++ L Sbjct: 945 DVKTLSGGECFKASLSMALGLADVVQSYSGGIQLDTMFIDEGFGTLDPESLDSAIECLID 1004 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 L G+ +GVISHV+ +K+RI +++V N Sbjct: 1005 LQDDGRVVGVISHVQELKDRIETKLEVSSTN 1035 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L + ++DF N +F ITG TGAGKTT+ DAI ALY E Sbjct: 1 MKIRKLIITGFGPYAERQELDFESSLDGKN-MFVITGNTGAGKTTIFDAINFALYGEASG 59 Query: 61 LSNVSQS-QNDLMTRDTAECLAEVE--FEVKGEAYRAFWS--QNRARNQPDGNLQV-PRV 114 ++ ++D + T EVE F ++ + Y S RA+ + DG + P Sbjct: 60 SERDGKNLRSDFADKSTP---TEVELWFSLRNKEYYIKRSPQYFRAKQRGDGFTESKPSA 116 Query: 115 ELARCADGKILADKV----KDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 E+ + DK K+ L + G+ +F + +++ QG+F LN+ ++ Sbjct: 117 EIK-------IGDKTVSGPKEVTRLVEEILGITCEQFKQLVMIPQGEFKKLLNSDSDKKE 169 Query: 171 ELLEELTGTEIYGQI 185 E+ ++ GT+++ I Sbjct: 170 EIFRKIFGTKVFSDI 184 >UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJR5_9FIRM Length = 1007 Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 35/225 (15%) Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +E +Q ++ H +L N T+ G I +Q +DA QQQ W ++ Sbjct: 789 LESQEQTKSRIHHRLETNRTAYGRILKQ--KDAMEEIQQQ---------------WTWVK 831 Query: 885 SL-------IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------KASE 930 SL +G KE F + Q + ++ AN + + G +Y L+R + Sbjct: 832 SLSDTASGEVGGKEKITFETYVQMAYFERIIARANTRFMVMSGGQYELKRCTEEDNRGKS 891 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 L + V+D + R +TLSGGESF SL+LAL LSD + + R+D++F+DEGFG Sbjct: 892 GLGLNVIDHYNG-TQRSVKTLSGGESFQASLSLALGLSDEIQSAAGGIRLDTMFVDEGFG 950 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +LD +TL+ A+ AL L + +G+ISHV +KERI QI V K Sbjct: 951 SLDEDTLNLAMKALGDLAEGRRLVGIISHVTELKERIERQIVVVK 995 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 42/295 (14%) Query: 19 KIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP---RLSNVSQSQNDLMTRD 75 K+D + GL+ ITG TGAGKTT+ DAI ALY R + +S+ M Sbjct: 2 KLDM--DALGDRGLYLITGDTGAGKTTIFDAITFALYGNASGEARRPKMLRSKYAPM--- 56 Query: 76 TAECLAEVEFEVKGEAY--RAFWSQNRARNQPDGNL-QVPRVELARCADGKIL-ADK-VK 130 A E+ F Y R RA+ + +G + P EL R DG+++ DK V Sbjct: 57 DARTFVEMSFVYNEAGYCVRRNPEYMRAKQRGEGETKEKPDAEL-RMPDGRVITGDKAVT 115 Query: 131 DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVF 190 ++E TL GL +F++ +L+QG F+ L+ K ++R + E+ GT Y Q + Sbjct: 116 QEIE---TLLGLSREQFSQIAMLAQGSFSRLLSGKTEDRGTIFREIFGTRPYQQFQEKLK 172 Query: 191 EQHKSARTELEKLQAQASGVT--LLTPEQVQSLT--------ASLQVLTDEEKQLITAQQ 240 +Q K+ + + T ++ E+ L SL+V+ + +Q+ITA Sbjct: 173 DQAKALYGQYADTRKSIGQYTDGVIPGEERADLAIRWKEAQKGSLEVMLELLEQMITADM 232 Query: 241 QEQQSLNWLTRQDELQQEAS------RRQQALQQALAEEEKAQ-------PQLAA 282 +E+ + + R +++E S + Q+ +AL + E A+ P+LAA Sbjct: 233 EEEHAAD--GRMKAIREEMSALGLKLGKAQSASKALKDMEAARLVLDREAPRLAA 285 >UniRef50_A8SHZ0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHZ0_9FIRM Length = 934 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 11/159 (6%) Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE------ALEVEVVDTWQ 941 SK+ + + Q LD ++ AN +L ++ G+Y L+R +E L++ V+D + Sbjct: 770 SKQKIRLEAYIQMNYLDRILRYANTRLMQMTAGQYELERIGAENQRSQSGLDLGVIDHYN 829 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 R +TLSGGESF SLALAL LSD V + R+D+LFLDEGFG+LD E+L+ A+ Sbjct: 830 G-TRRSVKTLSGGESFKASLALALGLSDEVQSSAGGIRLDTLFLDEGFGSLDEESLELAI 888 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 L L + +G+ISHV A+K+RI Q+ V K G Sbjct: 889 RVLSGLTEGDRLVGIISHVGALKDRIDRQVVVHKARTGG 927 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 98/221 (44%), Gaps = 36/221 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALY-HETP 59 M+ L L L E +D E GL+ ITG TGAGKTT+ DAI ALY H + Sbjct: 1 MRPLRLTLSAFGPYAAEITLDL--EKLGKGGLYLITGDTGAGKTTIFDAITYALYDHSSS 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAF----WSQNRARNQ------PDGNL 109 + S + D E+EFEV G Y + + +AR + D L Sbjct: 59 GIREGSMLRCKYAD-DKTPTFVELEFEVHGVRYTVRRNPEYQRPKARGEGMTTEKADATL 117 Query: 110 QVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 P D + K KD + GLDY +F++ +L++QGQF LNA +ER Sbjct: 118 TYP--------DDRPPVTKAKDVTAAVQEIIGLDYNQFSQIVLIAQGQFTKLLNASTEER 169 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV 210 + + +L T+ Y Q+ E+LQA+AS + Sbjct: 170 SRIFRKLFRTQRYAQLQ--------------ERLQAEASAL 196 >UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I3W3_CLOCE Length = 1049 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 17/167 (10%) Query: 880 WGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRK------ 927 +G + L +GD F ++ D ++ AN +LTR+ G RYLL+RK Sbjct: 871 YGIIAKLAKVAKGDNPQRITFERYVLAAYFDEIIIAANYRLTRMTGSRYLLKRKEEKGKG 930 Query: 928 -ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 A + LE+EV D + A R +TLSGGE F SLALAL L+D+V S +D+LF+D Sbjct: 931 RAQQGLELEVFDNYTGKA-RHVKTLSGGEGFKASLALALGLADVVQSYSGGISLDTLFVD 989 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 EGFG+LD E+LD A++ L + +G+ +GVISHV +KERI ++V Sbjct: 990 EGFGSLDPESLDGAIECLTEIQKTGRLVGVISHVTEIKERINSVLEV 1036 >UniRef50_O67124 Probable DNA double-strand break repair rad50 ATPase n=1 Tax=Aquifex aeolicus RepID=RAD50_AQUAE Length = 978 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 124/210 (59%), Gaps = 13/210 (6%) Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 E ++ +L + H+KL GE++++L+ + ++++ L ++I+++ +++E + +++ Sbjct: 768 ESVKTQLEEKHKKL-------GEVKRELEHLGERLKRKEELQKEISELEKKLEVYRVISN 820 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ-RKASEALEVEVVDTWQADA 944 GD+F+K+ + L +V A++ + G Y + +A++ + ++V + + Sbjct: 821 DF---RGDRFQKYVSEIMLQKVVDRASEYFYKFTGNYFFELERATKGRDKDIVVVESSTS 877 Query: 945 -VRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 R +LSGGE+FL SL+ A A+SDL+S ++SLF+DEGFG+LD + + + L+A Sbjct: 878 QRRPVSSLSGGETFLASLSFAFAVSDLLSGSANLESLFIDEGFGSLDQDMRERVSEILEA 937 Query: 1004 LNAS-GKTIGVISHVEAMKERIPVQIKVKK 1032 + + K IG++SH+ ER +I V+K Sbjct: 938 IKTNVNKMIGIVSHIPDFAERFTERIVVEK 967 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 30/349 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L +K K IDFT P F I G TGAGKT+++DAI ALY + PR Sbjct: 1 MRPLKLEVKGFTVYKKPQVIDFT--PLK---FFVIQGKTGAGKTSIIDAITYALYGKVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S + +++R E ++F ++G YR + R P+ + QV E R Sbjct: 56 Y-GASVATKYVLSRGEKELKVALDFSLRGRNYRV---ERYYREFPEDS-QVRVYEEGRRL 110 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + I A++V+ L ++GLDY FT+ +LL QG+F FL + ER ++L L G E Sbjct: 111 N--IKANEVEKWL---FKISGLDYKTFTKVILLPQGEFDRFLK-ESSERKKILINLLGLE 164 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 ++ + E K+ + E L+ + + TP + + L +L+ L +E K+L ++ Sbjct: 165 ELEKVRQLASETFKNLEGKREALKKEYELLKDYTPTKKEVLEKTLKNLEEELKELKETEE 224 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +Q L +D L++E S+ L++ +L + LR E + Sbjct: 225 KLRQELKKAEEKDSLERELSQVVTKLKE-------------LENLEKEVEKLREKLE-FS 270 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 A I ++IEE++ +L + + A EL Q+ LN Sbjct: 271 RKVAPYVPIAKRIEEIDKKLTELKVRKNKLTKELAVLKDELSFAQEELN 319 >UniRef50_C7HA26 Exonuclease SbcC n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA26_9FIRM Length = 818 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 18/170 (10%) Query: 880 WGYLNSL-------IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE- 930 W ++N+L + SK+ + + Q LD ++ AN +L ++ G+Y L+R +E Sbjct: 638 WQWVNALASTAGGTLSSKQKIRLEAYIQMNYLDRILVHANTRLMQMTAGQYELERIGAEN 697 Query: 931 -----ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 L++ V+D + R +TLSGGESF SLALAL LSD V + R+D+LFL Sbjct: 698 QRSQSGLDLGVIDHYNG-TRRSVKTLSGGESFKASLALALGLSDEVQSTAGGIRLDTLFL 756 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 DEGFG+LD E+L+ A+ L L + +G+ISHV A+K+RI Q+ V K Sbjct: 757 DEGFGSLDEESLEQAIRVLSGLTEGDRLVGIISHVAALKDRIDRQVVVHK 806 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 6/198 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALY-HETP 59 M+ L L L G + E GL+ +TG TGAGKTTL DAI ALY H + Sbjct: 1 MRPLKLTLSAFGPYAGTTTLPL--EQLGRGGLYLVTGDTGAGKTTLFDAITYALYDHSSG 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-NLQVPRVELA- 117 + + + ++ T E+EFEV+G+ Y + R + G + + A Sbjct: 59 GVRDGAMLRSKYADPGT-PTFVELEFEVRGQRYTVRRNPEYLRPKARGEGFTTEKADAAL 117 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ADG+ K K+ + GLDY +F++ +++QGQF LNA +ER+++ +L Sbjct: 118 TYADGRPPVTKAKEVTAAVIDIIGLDYNQFSQIAMIAQGQFTRLLNATTEERSKIFRKLF 177 Query: 178 GTEIYGQISAMVFEQHKS 195 T+ Y ++ + E++ + Sbjct: 178 RTQRYQKLQEALAEENSA 195 >UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH6_EUBSP Length = 1059 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 104/367 (28%), Positives = 185/367 (50%), Gaps = 46/367 (12%) Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 + R+ +L L+ L Q+ E EE + R++ Q S Q+ +++ D A Sbjct: 702 KERLTELEDELQLLKQAYERAKAEEKESMVTVRRLEGQ---KKSSQEAVEELDREAGI-- 756 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 +++A ++ AL+ F D+ A+ AA M E+ LEQ Q + + ++ +T E Sbjct: 757 -RSEA-WNQALKVQGFADEAAYQAARMPEEETALLEQKIQEYRVKVNETAGMI-KTIE-- 811 Query: 808 AQHQQHRPDDGLALTVTVEQ-------IQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 AQ + P D + +++ +Q E + + R+N QG +++ LKQ D + Sbjct: 812 AQLEGMEPADTDKILEEIQKAETDAQAVQNESMRLYSMNRKN---QG-VKEHLKQYLDKK 867 Query: 861 ---QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 + Q +++ +++ SL G+ + D F + Q ++H ANQ+L R Sbjct: 868 GILRSQYEMLENLSRTAN--------GSLSGTVKMD-FETYVQRQYFRQIIHAANQRLVR 918 Query: 918 L-HGRYLLQRK--------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 + ++LQ + L+++V A +VRD +TLSGGESF+ SLA+AL L+ Sbjct: 919 MTSNEFILQCREVGNLSSQGQAGLDLDVYHMASA-SVRDVKTLSGGESFMASLAMALGLA 977 Query: 969 DLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 D+V + R+D++F+DEGFG+LD + A+ L L + +G+ISHV +KE+I Sbjct: 978 DIVQNTAGAIRLDTMFVDEGFGSLDDTAREQAIRVLHDLAGDKRLVGIISHVNELKEQID 1037 Query: 1026 VQIKVKK 1032 +++V K Sbjct: 1038 CKLQVTK 1044 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 24/199 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 MK + L + S IDF GLF ITG TG+GKTT+ DAI ALY +T Sbjct: 1 MKPIRLVMSAFGSYAEVTTIDFQ---GVQQGLFLITGDTGSGKTTIFDAITYALYDQTSG 57 Query: 60 --RLSNVSQSQ---NDLMTRDTAECLAEVEFEVKGEAY----RAFWSQNRARNQPDGN-- 108 R N+ +SQ D+ T E F +G+ Y + + R DG+ Sbjct: 58 GARDGNMMRSQYASEDMGT------YVEYTFSYQGKEYTIRRNPEYIRLGKRRYADGSPR 111 Query: 109 -LQVP-RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 ++ P +VEL DG + K ++ + + GLD +FT+ +++QG F L+A+ Sbjct: 112 YVKEPSKVELI-LPDGSVFQGKKRETDQKIEEIIGLDSVQFTQIAMIAQGDFLKLLHAES 170 Query: 167 KERAELLEELTGTEIYGQI 185 KER ++ ++ T +Y ++ Sbjct: 171 KERKKIFTKIFQTRLYYRV 189 >UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2Q2_EXISA Length = 1002 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 94/149 (63%), Gaps = 12/149 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEVVDTWQADAVR 946 F + Q D ++H AN L ++ G++ L+RK A LE+ V D + + R Sbjct: 843 FETYVQTAFFDQILHAANIHLDQMTSGQFRLERKVETAKGNAKSGLELLVFDAYTGQS-R 901 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 + LSGGE F SL+LAL L+++V S ++++ +DEGFGTLD+E+LD A++ L + Sbjct: 902 RVQNLSGGEGFKASLSLALGLAEVVQQLSGGISLETMLIDEGFGTLDAESLDQAIELLMS 961 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L A+G+ +GVISHV+ +K+R+ +I+VKK Sbjct: 962 LQATGRLVGVISHVQELKDRVDARIEVKK 990 >UniRef50_C6LAW6 Putative exonuclease SbcC n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAW6_9FIRM Length = 752 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 25/275 (9%) Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Q+EQ + N ++ ++ + LA QHR +DG + + L + ++ Sbjct: 478 QMEQSFEQARNAYESSEKILEKNRALLATLTQHRMEDGADDMQALSDCRDTLLEKKAAVQ 537 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK--- 897 E S Q ++ ADN ++ +++I + + ++ +L + G +K Sbjct: 538 ERRESCSLRLQTNRRAADNISREAEALEKIQR------KYIWMKALADTANGGLRQKDRI 591 Query: 898 ----FAQGLTLDNLVHLANQQLTRLHG-RYLLQRK-------ASEALEVEVVDTWQADAV 945 + Q + ++ AN +L + G +Y L+R+ + LE++V D + V Sbjct: 592 TLETYIQMTYFERIIERANVRLMVMSGGQYELKRREEADRRTSQSGLELDVTDHYNG-TV 650 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R +TLSGGE+F+ SL+LAL LSD + + R+D++F+DEGFG+LD E L+ A+ AL Sbjct: 651 RSVKTLSGGETFMASLSLALGLSDEIQSQAGGIRLDTMFVDEGFGSLDEEALNQAVKALA 710 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 L + +G+ISHV +KERI QI V+K G G Sbjct: 711 ELTEGRRLVGIISHVAELKERIESQIVVRKEPGSG 745 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 92/187 (49%), Gaps = 11/187 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+ L L + G+ +IDF E + GL+ ITG TGAGKTT+ DAI ALY E Sbjct: 1 MRPLKLVMSAFGPYAGKTEIDF--EKLGTQGLYLITGDTGAGKTTIFDAIIFALYGEASG 58 Query: 60 --RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-NLQVPRVEL 116 R +++ +S+ L T AE+ F G+ YR + R + G V R + Sbjct: 59 SFRDASMFRSKYALPETPT---YAELTFAYSGKTYRVCRNPEYMRPKDRGEGFTVQRADA 115 Query: 117 A-RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A DG ++ KVKD L GL+ +F +++QG F L AK +ER ++ E Sbjct: 116 ALTFPDGHVIT-KVKDVTAAVTELIGLNRNQFMNIAMIAQGDFQNLLMAKTEERGKIFRE 174 Query: 176 LTGTEIY 182 + T+ Y Sbjct: 175 IFHTKAY 181 >UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium botulinum RepID=B2UXL2_CLOBA Length = 1180 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 11/191 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E KIDF + G F I GPTG+GK+T+LD I LALY + Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFNK--LTERGFFGIFGPTGSGKSTILDGITLALYGQ--- 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW-SQNRARNQPDGNLQVPRVELARC 119 VS+ ++ + + +F++ G + + S+ R+ GN + R ++ Sbjct: 56 ---VSRKSSNYINTNCDSLNVSFKFQISGVEKKIYIVSREFKRDNKTGNPRTSRAKIIDT 112 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +G +ILADK + E + GL FTR+++L QG+F+ FL + K R E+LE L Sbjct: 113 TNGIEEILADKAQKVTEKCEEIIGLGLEDFTRTVVLPQGKFSEFLKLEGKSRREMLERLF 172 Query: 178 GTEIYGQISAM 188 + YG I ++ Sbjct: 173 NLQKYGNILSI 183 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/140 (40%), Positives = 83/140 (59%), Gaps = 5/140 (3%) Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRT 950 G KF +F L + A+++L + +G Y L+ E + + D A RD T Sbjct: 1024 GKKFVEFVAITQLKYISMEASKKLKDITNGIYGLE--VDENGKFIIRDYKNGGAERDAST 1081 Query: 951 LSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 LSGGE+FL SLALALALS + K ++ FLDEGFGTLD + L+ + +L+ L+ Sbjct: 1082 LSGGETFLTSLALALALSSQIQLKGTAPLELFFLDEGFGTLDDDLLEVVMSSLEKLHNDK 1141 Query: 1009 KTIGVISHVEAMKERIPVQI 1028 IG+ISHVE++K R+PV++ Sbjct: 1142 LKIGIISHVESIKNRVPVKL 1161 >UniRef50_B0G4B6 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G4B6_9FIRM Length = 897 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 12/160 (7%) Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEALEVE 935 N I KE + Q + ++ AN + + G+Y L R ++ LE++ Sbjct: 728 NGNISGKEKIMLETYVQMAYFERILQRANVRFMVMSEGQYELARSVVAGNNRSQSGLELD 787 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSE 992 V+D + R +TLSGGESF SL+LAL LSD V + R+D++F+DEGFG+LD E Sbjct: 788 VIDHYNG-TRRSVKTLSGGESFKASLSLALGLSDEVQSRAGGIRLDTMFVDEGFGSLDEE 846 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +L+ A+ AL L K +G+ISHV +KERI QI V K Sbjct: 847 SLEQAIKALAGLTEGNKLVGIISHVGELKERIDRQIIVTK 886 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 17/190 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L+L G ++D R + GL+ ITG TGAGKTT+ D I ALY Sbjct: 1 MRPKKLKLSAFGPYAGCEELDMER--LGTGGLYLITGDTGAGKTTIFDGIVYALYGAAS- 57 Query: 61 LSNVSQSQNDLMTRDT---AECLAEVE--FEVKGEAYRAFWSQNRARNQPDGN---LQVP 112 +++ M R A+ EVE FE G+ Y+ + R G LQ Sbjct: 58 ----GENREPAMLRSKYADAQVPTEVELLFENGGQEYKVRRNPEYERPAKKGGGMTLQRS 113 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 EL DG+++ K K+ + + GL+ +F + +++QG F L A KER + Sbjct: 114 EAELT-YPDGRVVT-KQKEVNKAIIEILGLNRNQFLQIAMIAQGDFQKLLLADTKERQGI 171 Query: 173 LEELTGTEIY 182 E+ T Y Sbjct: 172 FREIFKTGGY 181 >UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUY7_9AQUI Length = 975 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 139/260 (53%), Gaps = 16/260 (6%) Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 M+++ L+ LE+ +N ++ + + + LA ++ T VE++++EL Sbjct: 720 MEQEKLSSLEKELENYLTEKNSLEERIRELESKLASVEE---------TEAVERLEEELV 770 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 +L E GE++ +Q + ++ L ++++++ +++ + ++ + S + Sbjct: 771 GKKGELEELIRRAGELKSLAEQKREMLDKKDNLTRRVSEIEKEIGLYSRISEDLKS---N 827 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 + + F L L +V A++ L Y L E E+ V+DT Q RD ++LSG Sbjct: 828 RLQDFVASLMLKRVVERASEYLHEFTNAYYLG--MDEKGELVVIDTVQGTE-RDVKSLSG 884 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIG 1012 GE+FL SL+LAL +SD++S ++SLF+DEGFG+LD ET + D L+ + + +G Sbjct: 885 GETFLASLSLALGVSDVLSADAHLESLFIDEGFGSLDEETRERVSDILEVIKQRINRMVG 944 Query: 1013 VISHVEAMKERIPVQIKVKK 1032 +ISH+ + +R +I VKK Sbjct: 945 IISHIPDLADRFHQRIVVKK 964 >UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA6_9LACO Length = 1034 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 95/158 (60%), Gaps = 15/158 (9%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLL----QRKAS---EALEVEVVDTWQADAVR 946 F +F +++ +AN L +L GRY L KA+ LE++V D A R Sbjct: 874 FSRFVLANYFRSVIEVANIHLDKLTGGRYNLVLDDTAKANLKNMGLELDVYDD-NAGVNR 932 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDA 1003 TLSGGESF+ SL+LA+AL +++ + I+++F+DEGFGTLD E L + L AL + Sbjct: 933 PVHTLSGGESFIFSLSLAMALGEVIQERNGGISIEAMFIDEGFGTLDDERLQSVLSALQS 992 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKV---KKINGLGY 1038 L + + IG+ISHV+ KE+IP QI+V + I+ +GY Sbjct: 993 LENNNRMIGIISHVDKFKEQIPAQIQVTSKEGISTIGY 1030 >UniRef50_C1XTG5 ATPase involved in DNA repair n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XTG5_9DEIN Length = 904 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 23/233 (9%) Query: 32 LFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEA 91 LFAITGPTG+GK+TLLDAI ALY ETPR+ ++ ++L A E+EF V + Sbjct: 27 LFAITGPTGSGKSTLLDAITYALYKETPRIG--AKGLSELKHPGAAHTRVELEFSVAEQV 84 Query: 92 YRAFW-----SQNRARNQPDGNLQV-PRVELARCADGKILADKVKDKLELTATLTGLDYG 145 +R +Q+R +G +V P E A+ D +I A L G+DYG Sbjct: 85 WRVVRVLGKENQHRLEYLQEGGWKVHPSSEKAKTLDAQI------------AHLVGMDYG 132 Query: 146 RFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQA 205 FTR++LL QGQF FL K+R E L +L G E + V E + AR +L+ L+ Sbjct: 133 TFTRAILLPQGQFDLFLRGAAKDRRETLIKLYGLERLKAMRERVGEHLREAREKLKLLEG 192 Query: 206 QASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQE 258 + + ++++L ++ L EE L + Q Q+ L R +EL Q+ Sbjct: 193 EMLALEEAEEGRLEALREEIEKLRREESSL---EAQVTQAERDLKRCEELAQK 242 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 9/163 (5%) Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS 929 A+++Q V+ W L +GD+F+ + L+ A + ++ L GRY R Sbjct: 738 AKLSQSVDLW---ERLARDLQGDRFQDYLLERYQAGLLQRATELMSELSSGRY---RFCL 791 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTL 989 + E V D W A+R RTLSGGES ++ + RI +LFLDEGFGTL Sbjct: 792 DGGEYAVEDRW-IQAIRPVRTLSGGES-FLASLSLALSLSEHLSRGRIGALFLDEGFGTL 849 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 D+ETL+ L+AL G+ +G+++HVEA+ ER+P ++ V K Sbjct: 850 DAETLEQVAGVLEALPTRGRLVGIVTHVEALAERLPARLVVDK 892 >UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0HHE7_SHESM Length = 1018 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 15/132 (11%) Query: 917 RLH----GRYLLQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 RLH GRY L RK A LE+EV D + + VR TLSGGESF+ +L++AL Sbjct: 878 RLHLMSKGRYRLLRKEDRAKGNKASGLELEVEDAYTSK-VRPVATLSGGESFMAALSMAL 936 Query: 966 ALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 LSD+V + ++D+LF+DEGFG+LD ++L+ A+ L L ++G+ IGVISHV MKE Sbjct: 937 GLSDVVQAYAGGIKLDTLFIDEGFGSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKE 996 Query: 1023 RIPVQIKVKKIN 1034 +I +I + K + Sbjct: 997 QIGTRIDILKTS 1008 >UniRef50_C1YLC8 Putative uncharacterized protein (Fragment) n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YLC8_NOCDA Length = 392 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 16/144 (11%) Query: 904 LDNLVHLANQQLTRLH-GRYLLQR-----------KASEALEVEVVDTWQADAVRDTRTL 951 L+ +V AN +L + GRY L+ +++ L + VVD W RD TL Sbjct: 239 LEQVVAAANDRLVTMSDGRYELRYTVDKAAGDGRARSAGGLGMRVVDAWTG-VERDPATL 297 Query: 952 SGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 SGGE+F SLALAL L D+ S + ID+LF+DEGFGTLD +TL+ LD LD L G Sbjct: 298 SGGETFFSSLALALGLGDVASAEAGGADIDTLFVDEGFGTLDEDTLEEVLDVLDRLRDGG 357 Query: 1009 KTIGVISHVEAMKERIPVQIKVKK 1032 + +GV+SHV +++R+ ++KV K Sbjct: 358 RAVGVVSHVADLRQRVSARLKVVK 381 >UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME Length = 1014 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 28/288 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ ++L L+ + +DF+ F LF I GPTGAGK++LLDAIC ALY ET Sbjct: 1 MRPITLTLQAFGPFASQQVVDFS--AFGHAPLFLINGPTGAGKSSLLDAICYALYGET-- 56 Query: 61 LSNVSQSQNDLMTRDTA--ECLAEVEF--EVKGEAYRAFWS--QNRARNQPDGNLQVPR- 113 S+ D M D A L E+EF E+ ++ S Q A+ + +G + Sbjct: 57 --TGSERTGDQMRCDYAPDSVLTEIEFVFELHQRRFKIIRSPDQQVAKQRGEGTTKKSHA 114 Query: 114 ---VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 +EL + K+LA K L GLD +F + M++ QG+F L A KER Sbjct: 115 ASLIELIANEEEKLLAHSPKRVAAAVLELIGLDVKQFRQVMVIPQGKFRELLVANSKERE 174 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG----VTLLTPEQVQSLTASLQ 226 ++ +L T IY QI +FE+ R + E+ Q G V + + E++Q S++ Sbjct: 175 QIFGQLFQTHIYTQIERELFERAAEIRRQKEQFDQQIKGALNVVAMASEEELQQALTSIE 234 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQ----DELQQEASRRQQ-ALQQA 269 +Q + QQ QQ L+ L +Q ELQ + S+++Q AL+QA Sbjct: 235 PSLKNSEQ---SHQQAQQKLDVLKQQWHAGQELQAKFSQQEQLALEQA 279 >UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9RXI5_GEOSY Length = 1114 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 16/217 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL + L+S + + IDFT G+F I GPTG+GK+T+LDA+ LAL+ R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFT--ALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 +N +Q+ ++ E FE++ A ++ R+ + D R A C Sbjct: 59 AANRTQA---IINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEW----RTRSAVCR 111 Query: 120 -----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 ++ +LADK+ + + L GL FTR+++L QG+FA FL+ K ER ++L+ Sbjct: 112 LIEHRSEPVVLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQ 171 Query: 175 ELTGTEIYG-QISAMVFEQHKSARTELEKLQAQASGV 210 L E YG Q++ + ++ +AR E EK++A+ +G+ Sbjct: 172 RLFHLERYGDQLNKKLKDRLAAARQEWEKIEAEKAGL 208 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 8/169 (4%) Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE 930 ++++ +E + L +L+ G+ F +F L+ + +A+++L RL RY L+ + Sbjct: 941 ELSRHIERYKQLQALL---RGNSFVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQG 997 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGT 988 + D R TLSGGE+FL SL+LALALS + + + FLDEGFGT Sbjct: 998 GFLIR--DDANGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGT 1055 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 LD+E L+T + AL+ L+ +GVISHV+ ++ R+P ++ V+ G Sbjct: 1056 LDAELLETVISALEKLHTERLAVGVISHVQEIRHRLPRRLIVEPAEPSG 1104 >UniRef50_C6PTN2 Exonuclease SbcC n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTN2_9CLOT Length = 409 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 12/147 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADAVR 946 F ++ DN++ AN + ++ RY L R + LE++V D + R Sbjct: 250 FERYVLAFFFDNIIEAANIRFAKMSENRYELDRIKQKGKGLTQSGLELQVYDNYTG-KYR 308 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGE F SL+LAL LSD+V S +D++F+DEGFGTLD E+L+ A+ L Sbjct: 309 HVKTLSGGEGFKASLSLALGLSDVVQCYSGGISLDTMFIDEGFGTLDPESLENAIQCLVD 368 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKV 1030 L +G+ +G+ISHV +KERI ++++ Sbjct: 369 LQNTGRLVGIISHVPELKERIDARLEI 395 >UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6P234_9BACE Length = 1098 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 13/171 (7%) Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRK-------ASEALEV 934 +N + KE + Q D ++ AN +L + G +Y L+R+ + LE+ Sbjct: 926 VNGNLAGKEKIALETYIQMTFFDRILQRANLRLMVMSGGQYELKRRREAENNRSQSGLEL 985 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 +V+D + + R ++LSGGESF SL+LAL LSD V + R+D++F+DEGFG+LD Sbjct: 986 DVIDHYNG-SERSVKSLSGGESFKASLSLALGLSDEVQSAAGGIRLDTMFVDEGFGSLDE 1044 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 E+L AL AL L + +G+ISHV +KE+I Q+ V K G S++E Sbjct: 1045 ESLAQALQALTGLTEGNRLVGIISHVAELKEKIDKQVVVTKEKS-GGSRVE 1094 >UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYS9_9CLOT Length = 1053 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 139/577 (24%), Positives = 267/577 (46%), Gaps = 104/577 (18%) Query: 500 LQAGQPCPLCGSTSHPAV----------EAYQALEPGVNQSRLLALENEVKKLGEEGATL 549 L+ G+PCP+CGS HPA E +A + NQ+ L+ E+ + LGE L Sbjct: 525 LEEGKPCPVCGSCGHPAPAHLSDDAPSQEEVEAAKERRNQAELVR-ESAAQALGEAAGRL 583 Query: 550 RGQLDAITKQLQR--------DENEAQS-LRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 R + + ++ ++ D EA++ +R++ A ++ + +L + +++ Sbjct: 584 RTEREVFERECRKILGPGAGADPAEAEAEIRREAGACRREAEDTKQAL---CRAQKNVKR 640 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + Q+E+E+Q R LS L+ ++Q +Q ++ RQ L Sbjct: 641 YAAVQEEYEKQERELS----LKNNALKESRQKLQELEREYSRQNALA------------- 683 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 +E+++ L R ++ ++R+NE+ L LE L + C + R Sbjct: 684 EEKKNKLEYRSKD--EAEKRRNEVYGL----------LEELRE-----RCAKA------R 720 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQ------KAQAQFDTALQASVFDDQQAFLAALM 774 + +E+ AL Q++T ++ + Q KA+ F AL Q+AF +A Sbjct: 721 ERYER--ALQDQRRTEGERSGEEKRGRQLDVQRRKAEEGFREALA------QEAFASAKE 772 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL----AQHQQHRPDDGLALTVTVEQIQQ 830 E LE K+ +E+ Q + V L +Q + D AL + E++ + Sbjct: 773 YEAKKPLLESAKE-MESALEQYLSQVRDNEAALKLLGSQIEGKERADVEALKLEAEELSR 831 Query: 831 ELAQTHQ---KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 ++ +L + EIR++L+++ + + Q + + +++ +L Sbjct: 832 KIRDIRGGQIRLGGMNSKNREIREELRKEFEKKGGLQRQYELVGNLSRTAN-----GNLS 886 Query: 888 GSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK--------ASEALEVEVVD 938 G+ + D F + Q ++ AN++L ++ + ++LQ + L+++V+ Sbjct: 887 GAVKLD-FETYVQRQYFKQIIQAANKRLIQMTNNEFILQCRDVKSLGSQGQAGLDLDVLH 945 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 VRD +TLSGGESF+ SL++AL L+D+V + +D++F+DEGFG+LD + + Sbjct: 946 LLSG-TVRDVKTLSGGESFMASLSMALGLADIVQNTAGAVHLDTMFVDEGFGSLDDGSRE 1004 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 A+ L+ L + +G+ISHV +KE+I ++ V K Sbjct: 1005 QAIKVLNELAGDSRLVGIISHVNELKEQIDNKLIVTK 1041 >UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WKU1_ACTMD Length = 962 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 100/160 (62%), Gaps = 11/160 (6%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEVVDTWQADAVR 946 R + L+ + A+++L R+ GRY R A L ++V+D + R Sbjct: 806 LRTYVLAAKLEEVAVAASERLDRMSQGRYRFVHSTEAGPRGARGGLGLDVLDDYSGHQ-R 864 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 T+TLSGGESFL SLALAL L+D+VS +D+LF+DEGFGTLD++TLD ++ LD L A Sbjct: 865 PTKTLSGGESFLASLALALGLADVVSQGAVLDTLFVDEGFGTLDADTLDLVMNTLDDLRA 924 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 G+ +G++SHVE +++RIP +++V+K S LE T A Sbjct: 925 GGRVVGLVSHVEELRQRIPTRLRVRKAR--AGSTLEVTTA 962 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 18/192 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L L G +DF + ++GLF + G TGAGKTTLLDA+ AL+ + P Sbjct: 1 MRLHRLELSAFGPYPGREVVDF--DALGADGLFLLHGDTGAGKTTLLDAVAFALFGQVPG 58 Query: 61 L-SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVEL 116 V + + D + D E + +E V+ S R + G Q + L Sbjct: 59 ARGEVKRLRCDYASPDV-ETVVSLELTVRERRLVITRSPEYERPKKRGGGTTRQNAKAAL 117 Query: 117 ARCAD------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 A + G+I D+V ++E +L G+ +F + +LL QG+FA FL A ER Sbjct: 118 AWVSGWEGEGHGRI--DEVAREVE---SLLGMTAHQFFQVVLLPQGEFARFLRADTGERE 172 Query: 171 ELLEELTGTEIY 182 +LLE+L GTE + Sbjct: 173 KLLEKLFGTERF 184 >UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1T2_CAPGI Length = 1017 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 6/177 (3%) Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 ++ L++ + Q+ + E L ++ G F ++ + L L AN + R+ R Sbjct: 837 KKELLKSVTQLRTRNEHIKLLENIF---RGQGFVQYISSIYLQQLCQHANVRFQRM-TRG 892 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDS--L 980 LQ + E E EV+D R +TLSGG++F VSL+LALAL++ V K + D Sbjct: 893 QLQLQLGENNEFEVIDFLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQSKAKADKNFF 952 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 F+DEGFGT DSE ++ + + L + +G+ISHVE +KERIP+ + + K N G Sbjct: 953 FIDEGFGTQDSEAINIVFETITGLLKDNRIVGIISHVEELKERIPLSLTITKDNERG 1009 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 10/175 (5%) Query: 4 LSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSN 63 L L ++ + S + + IDF++ GLF I G G+GK+++L+AI ALY ET RL+ Sbjct: 4 LYLTIEGIYSYQEKQHIDFSQ--LTDAGLFGIFGAVGSGKSSILEAITFALYGETERLNK 61 Query: 64 VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-NLQVPRVELA-RCAD 121 + ++M + + EF + E ++ RN +++ P V+ R + Sbjct: 62 ADKRGYNMMNLKSNRFYIDFEF-LNFENKHIRVTRELKRNSKKFEDVRTPIVQFYERVGN 120 Query: 122 GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 I ++ + L GL Y F R++++ QGQF FL K+R E+++E+ Sbjct: 121 QWIPLEQANPQ-----KLIGLSYENFKRTIIIPQGQFKEFLELGAKDRTEMMKEI 170 >UniRef50_B0MBW5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBW5_9FIRM Length = 843 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 12/151 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEALEVEVVDTWQADAVR 946 F +F +++ AN + ++ GRY + R + + LE+EV+D + R Sbjct: 686 FEQFILITYFRDILKAANIRFVKMTGGRYEMFRSETVTDARKKDNLEIEVMDYYTGKR-R 744 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGESF +L LAL LSD+V + +I+ LF+DEGFG+LDSE+L+ A+ L Sbjct: 745 SVKTLSGGESFKAALCLALGLSDIVRNSAGGIQIEVLFVDEGFGSLDSESLEQAVSCLQE 804 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 L+ + IG+ISHV + ERI +I V+K N Sbjct: 805 LSGKNRMIGIISHVPELSERIEEKITVRKKN 835 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 92/375 (24%), Positives = 169/375 (45%), Gaps = 32/375 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + G+ +IDF++ GLF ITGPTG+GKTT+ DA+ ALY E Sbjct: 1 MKPLFLEISAWGPYAGKNQIDFSK---FQGGLFLITGPTGSGKTTIFDALTYALYGEVSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA--FWSQNRARNQPDGNLQVPRVELAR 118 +S + +EF + E YR RA+ + G + Sbjct: 58 SVRTKESLRSDFASQKEDTYVILEFTHRNEKYRVERHPKYRRAKRKGSGTTVKKEDAVLT 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG + A K EL+ L+ +DY +F + +L+QG+F L AK +RAE+ + Sbjct: 118 LPDGTVKAGTSKVNEELSRILS-IDYDQFRQISMLAQGEFQRLLTAKSSDRAEVFRSIFH 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPE--------QVQSLTASLQVLTD 230 T+IY +I + E+ ++ +E+ ++ Q L+ E + + +A + L D Sbjct: 177 TQIYKKIQGLAGEKARALLSEIREITNQMEEAAKLSGEDPAYEEMREKKDFSAVITFLED 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL---AEEEKAQPQLAAL---- 283 + K+ Q + LN +++E ++Q +QA AE E ++ +L Sbjct: 237 DYKE--KKQLASEAFLNSRNKREEFDS----KKQIFEQAKKLSAETETLASKICSLEEEL 290 Query: 284 -SLAQPARNLRPHWERIAEHSAALAHIRQQ---IEEVNTRLQSTMALRASIRHHAAKQSA 339 L Q N+R + + + H +++ ++E+N +L+ L + ++S Sbjct: 291 GELKQKRENIRKKKQDLYSLRDVMDHKKERLGVLKEINEQLERLGQLETEYEEASQEESR 350 Query: 340 ELQQQQQSL-NTWLQ 353 ++++ + ++ WL+ Sbjct: 351 QIRRTRMAVYQEWLE 365 >UniRef50_C0CP32 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CP32_9FIRM Length = 1441 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 12/149 (8%) Query: 898 FAQGLTLDNLVHLANQQL-TRLHGRYLL-------QRKASEALEVEVVDTWQADAVRDTR 949 + Q D ++ AN +L T G+Y L R+ LE++V+D + + R + Sbjct: 1274 YVQTNYFDRILRRANLRLLTMSSGQYELIRQQETENRREKTGLELDVLDHYNG-SRRSVK 1332 Query: 950 TLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 TLSGGESF SL+LAL LSD + + ++D++F+DEGFG+LD E L A+ AL +L Sbjct: 1333 TLSGGESFQASLSLALGLSDEIQSCAGGVQLDAMFVDEGFGSLDEEALSQAVRALGSLAD 1392 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKING 1035 + +G+ISHV +KERI +I V+K G Sbjct: 1393 GKRMVGIISHVSELKERIEKKIVVRKYRG 1421 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 26/187 (13%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP---RLSNVSQSQN---DLMT 73 IDF R +GL+ ITG TGAGKTT+ DAI ALY E R S + +S+ D+ T Sbjct: 20 IDFRR--LGGHGLYLITGDTGAGKTTIFDAITFALYGEASGEVRESGMFRSKYAEADVPT 77 Query: 74 RDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKL 133 E+ F +G+ Y+ + R + GN + AD ++ ++ + Sbjct: 78 ------YVELTFSYQGKIYQVNRNPEYQRPKAKGNGVTTQK-----ADASLIYPDLRQPV 126 Query: 134 ----ELTATLT---GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQIS 186 E+T +T GLDY +FT+ +++QG F L A KER E+ L TE + ++ Sbjct: 127 TKTREVTKAVTQLLGLDYRQFTQIAMIAQGDFQRMLLADTKERGEIFCRLFHTESFRRMQ 186 Query: 187 AMVFEQH 193 + E+ Sbjct: 187 GRLREEE 193 >UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWI8_9FIRM Length = 1024 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 14/195 (7%) Query: 851 QQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLV 908 Q+LK+ +Q Q L + A + G L + + + F+ + L ++ Sbjct: 819 QELKERRSREEQLQKLTLEAASLEAAYHTTGRLAEVAAGQNPHRMHFQTYVLRSILADVA 878 Query: 909 HLANQQLTRL-HGRYLLQRKA-------SEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 ANQ+L R+ HG+Y L+RK S L++E+ D A R TLSGGESFL + Sbjct: 879 DAANQRLLRMTHGQYRLERKEGVVDMRRSAGLDLEIFDENTGYA-RPMATLSGGESFLAA 937 Query: 961 LALALALSDLVSH---KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 LALAL L+D+V++ R+D++F+DEGFGTLD+ETLD A+ L L G+ +G+ISHV Sbjct: 938 LALALGLADVVTNYAGGIRLDTIFIDEGFGTLDAETLDLAIKTLMDLQKGGRLVGIISHV 997 Query: 1018 EAMKERIPVQIKVKK 1032 E +K RI V+++V+K Sbjct: 998 EELKNRIDVRLEVEK 1012 >UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIQ7_SANKS Length = 1047 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 13/142 (9%) Query: 904 LDNLVHLANQQLTRLH-GRYLLQRKASE--------ALEVEVVDTWQADAVRDTRTLSGG 954 +++V AN++L + GRY L R + L + V+D + RD RTLSGG Sbjct: 895 FEDVVAAANERLVTMSDGRYELLRSDDKEDVGTRKTGLAMRVLD-HSTETARDPRTLSGG 953 Query: 955 ESFLVSLALALALSDLVSHKTR-ID--SLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 E+F VSL LAL ++D+V+ + ID +LF+DEGFG+LD ETLD L L L A G+ + Sbjct: 954 ETFYVSLCLALGMADVVTAEAGGIDLGTLFVDEGFGSLDPETLDAVLAVLGGLRAGGRVV 1013 Query: 1012 GVISHVEAMKERIPVQIKVKKI 1033 GV+SHVEA+K+ + I V+++ Sbjct: 1014 GVVSHVEALKQTVADGISVRRL 1035 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 20/214 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ S+ L+ + G +DF+ A++G+F + GPTGAGK+TL+DA+ ALY + Sbjct: 1 MQLHSMTLQAIGPFAGRHTVDFS--ALAASGIFLLEGPTGAGKSTLIDAVVFALYGKVAS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + D+ + ++ FE +R + R R + G Q V+L Sbjct: 59 AATSDDRLRSAYADDSTDSFVDLTFETAAGVFRVLRTPERQRAKKRGEGTTKQQASVKLW 118 Query: 118 RCADGKILAD----KVKDKLELTAT-----------LTGLDYGRFTRSMLLSQGQFAAFL 162 R ++A + D EL +T GLD +F ++++L QG+FA+FL Sbjct: 119 RLPSDAVVAGAGLGEPGDVGELRSTRLDEVGLEIQRAVGLDRAQFVQTIVLPQGEFASFL 178 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSA 196 +KP++R LL+++ GTE+Y + A + K+A Sbjct: 179 RSKPEDRKGLLQKVFGTELYDRAEAALVTMRKTA 212 >UniRef50_A7B251 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A7B251_RUMGN Length = 886 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 127/228 (55%), Gaps = 25/228 (10%) Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA---QMTQQVEDWG 881 +E+++QEL +KLR + E ++ NR+ ++ L+ + ++ Q E G Sbjct: 651 IEKLEQELTIIREKLR---LGREESMMLHTRNEINRRARKALICDFSDAEKLRSQYEMMG 707 Query: 882 YLN-----SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLLQRK-------- 927 L+ +L GS + D F + Q ++H AN +L R+ G+ ++LQ + Sbjct: 708 NLSRTANGNLSGSVKLD-FETYVQRQYFRQIIHAANVRLARMTGQEFILQCRDIGSLSSQ 766 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK---TRIDSLFLDE 984 A L+++V D D+VRD +TLSGGESF+ SL++AL L+D+V + ++++F+DE Sbjct: 767 AQAGLDLDVYDLVN-DSVRDVKTLSGGESFMASLSMALGLADIVQNTAGAVSLETMFVDE 825 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 GFG+LD + A+ L L +G+ISHV +KE+I Q++VKK Sbjct: 826 GFGSLDDMARERAIQILKELAGEKGLVGIISHVNELKEQIEWQLEVKK 873 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 18/213 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 MK + L + S +G +IDFT NG F ITG TGAGKTT+ DA+ ALY T Sbjct: 1 MKPIKLTMSAFGSYRGVERIDFTG---IQNGCFLITGDTGAGKTTIFDAVTYALYGRTSG 57 Query: 60 --RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAF----WSQNRARNQPDGNLQVPR 113 R N+ +SQ DT E +F + + Y + + R DG ++ + Sbjct: 58 GKRDGNMMRSQYADSETDT---YVEFQFLYRDQEYTVRRNPEYLRPSKRKNADGTIKFVK 114 Query: 114 VELARCA----DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 E A+ + DG K K+ + GLD +FT+ +++QG F L+A+ KER Sbjct: 115 -ETAKISLILPDGSEFQGKKKEIDLKIEEIIGLDVNQFTQIAMIAQGDFLKLLHAESKER 173 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEK 202 ++ ++ T I+ +I + EQ K +LEK Sbjct: 174 KQIFSKIFHTRIFWKIQDTLKEQAKELYIQLEK 206 >UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0JY32_ARTS2 Length = 1023 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 99/193 (51%), Gaps = 18/193 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L + G IDF R +++GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLEISAFGPFAGTEHIDFDR--LSAHGLFLLNGATGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAE----VEFEVKGEAYRA----FWSQNRARNQPDGNLQVP 112 ++ + + D A+ AE EF KG + W++ AR + Q Sbjct: 59 ----ARQEGKRLRSDHADAAAEPRVTCEFSAKGRHFEVSRIPAWNRPSARGRNGFTEQKA 114 Query: 113 RVELARCADGKILADKVKDK---LELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 L DG+ + ++ E+++ L G+D +FTR ++L QG FAAFL +KP ER Sbjct: 115 NTLLRERVDGQWIEKSGRNDEAGAEISSVL-GMDREQFTRVVMLPQGDFAAFLRSKPAER 173 Query: 170 AELLEELTGTEIY 182 ELL+ L GTE + Sbjct: 174 LELLQSLFGTERF 186 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 146/309 (47%), Gaps = 36/309 (11%) Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 + A+ Q D AL S F+ A + L+ LE + +++ + L L Sbjct: 712 RDARQQLDKALPESGFESAAAARSVLLPVPEAAMLEAAIRAGQDEEARVGELFASEELIL 771 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG-------------EIRQQLK 854 A + DDG +EQ++ E A + R+ + G E +L Sbjct: 772 ATRELE--DDGPVEASVLEQLRAEDAAAERMARQAVVAAGLAEKSVLTLRRIAEDYGRLA 829 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 +++ L+ +A+ + D Y SL + L+ + A+++ Sbjct: 830 ASGQGPRERAALLTAVAEAARGAGDNTYRMSL---------NSYVLAARLEQVAIAASER 880 Query: 915 LTRLH-GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L + GRY LQ R A L +EVVD W RDT TLSGGESF+ SLALAL Sbjct: 881 LVGMSDGRYTLQHTDAKAARGAKSGLGLEVVDQWTGHR-RDTATLSGGESFMASLALALG 939 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 L+D+V S I++LF+DEGFG+LD + L+ +DAL+ L G+ +G++SHV MK+R Sbjct: 940 LADVVQQESGGVDIETLFVDEGFGSLDEQALEQVMDALEGLRDGGRVVGLVSHVPEMKQR 999 Query: 1024 IPVQIKVKK 1032 I Q++V K Sbjct: 1000 ISTQLQVVK 1008 >UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z3_9FIRM Length = 1117 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 78/242 (32%), Positives = 137/242 (56%), Gaps = 31/242 (12%) Query: 820 ALTVTVEQI---QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 +++++ E++ ++ AQ + L EN + EI +L+ ++D ++ + +Q ++ + Sbjct: 876 SISISAEELNAQKENFAQQKKSLSEN---RDEIHARLEINSDMYEK---IRRQQTELLKT 929 Query: 877 VEDWGYLNSLIGSKEGDKFRK-------FAQGLTLDNLVHLANQQL-TRLHGRY-LLQRK 927 W ++ SL + G K + Q D ++ AN +L T G+Y L++RK Sbjct: 930 ETRWKWMKSLSDTANGTITGKARIMLETYIQMQYFDRILARANIRLMTMSSGQYELVRRK 989 Query: 928 ASEA------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRID 978 +++ LE++VVD + VR +TLSGGE+F SL+LAL LSD + S ++D Sbjct: 990 ENKSRVGKTGLELDVVDHYNG-TVRSVKTLSGGETFQASLSLALGLSDEIQSSSGGIQLD 1048 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI---NG 1035 ++F+DEGFG+LD + LD A+ AL L+ + +G++SHV +KERI +I V K +G Sbjct: 1049 TMFVDEGFGSLDEDALDQAIRALKDLSQGSRLVGIVSHVAELKERIDKKIIVTKKRTEDG 1108 Query: 1036 LG 1037 +G Sbjct: 1109 VG 1110 >UniRef50_A4X567 SMC domain protein n=5 Tax=Micromonosporaceae RepID=A4X567_SALTO Length = 824 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 76/251 (30%), Positives = 115/251 (45%), Gaps = 23/251 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L + IDFT F FA+ GPTG+GK+T+LDAIC ALY PR Sbjct: 1 MRPMRLDLAGFTVFRAATTIDFTDADF-----FALVGPTGSGKSTVLDAICFALYGTVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAY---RAFWSQNRARNQPDGN---LQVPRV 114 N L T E + FE G+ Y R +R + G L P Sbjct: 56 WGGTRGLANALAPSAT-EARVRLVFESAGDRYVATRVVRRDSRGNVKTSGAGLQLMPPGF 114 Query: 115 ELARCADG-------KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPK 167 + A+ G ++LA V + + GL Y +FT +LL QGQFA FL+A+P Sbjct: 115 DPAKLDTGLSPEDLGEVLAGTVAEMEDAVLAAVGLPYEQFTSCVLLPQGQFADFLHARPA 174 Query: 168 ERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQV 227 R ++L L G IY ++ + A + E + +G+T + ++ ++A + Sbjct: 175 TRQQILVNLLGLGIYERVREKAGTRASQAEAKFEVVDQALAGLTGIDDAALEEVSARV-- 232 Query: 228 LTDEEKQLITA 238 D+ ++L TA Sbjct: 233 --DQMRELATA 241 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 T R+ + + QL++ R+Q L +Q A + + +L G + Sbjct: 615 TDDPGRDAAVALERVEAQLRELNRRREQAGELREQRATYERDAQ---VARALAGHLRANN 671 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 F ++ LD LV A+ L L G +Y L E VVD A R RTLSG Sbjct: 672 FERWLLTEALDLLVDGASTILRELSGDQYDLVHDKGEFF---VVDHHDAGLRRGVRTLSG 728 Query: 954 GESF----LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG- 1008 GE+F ++LALA L+ + + ++S+ LDEGFGTLD+ TLDT L+ L A G Sbjct: 729 GETFQASLALALALAEQLAGMSTTAASLESIVLDEGFGTLDAATLDTVAATLENLAARGD 788 Query: 1009 KTIGVISHVEAMKERIPVQIKVKK 1032 + +GV++HV A+ ERIPV+ +V+K Sbjct: 789 RMVGVVTHVPALAERIPVRFEVRK 812 >UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8B2_SACEN Length = 984 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 12/149 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEVVDTWQADAVR 946 R + L+++ A ++L R+ GRY R L ++V+D + +R Sbjct: 826 LRSYVLAARLEDVAEAATRRLQRMSDGRYSFVHSDAAGARGTRGGLGLDVLDDYSGK-IR 884 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGESFL SL+LAL L+D+V+ +T +D+LF+DEGFGTLD++TLD +D LD Sbjct: 885 PAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFIDEGFGTLDADTLDLVMDTLDD 944 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L G+ +G++SHVE M++RI V+++V+K Sbjct: 945 LRTGGRVVGLVSHVEEMRQRIAVRLRVRK 973 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 44/210 (20%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + +DF + S+GLF + G TGAGKTTLLDA+ A+Y P Sbjct: 1 MRLHHLEVTAFGPYRDTQSVDF--DTLGSDGLFLLHGDTGAGKTTLLDAVAFAIYGAVP- 57 Query: 61 LSNVSQSQNDLMTRDTA--ECLAEVEFEVKGEAYR------AFWSQNRARNQ-------- 104 ++ + + DTA E +V E+ + +R + + + R + Sbjct: 58 ---GARGEVKRLRCDTADPEVTTKVALELTVQGHRLRLERSPEYQRPKKRGEGFTTQQAK 114 Query: 105 ---------PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQ 155 PDG PR L+R D+V ++ L G+ +F + ++L Q Sbjct: 115 ASLTWLDAVPDGQ---PREGLSRI-------DEVARTMQ---RLLGMSVEQFFQVVMLPQ 161 Query: 156 GQFAAFLNAKPKERAELLEELTGTEIYGQI 185 G+FA FL A ER +LLE+L T+ +G + Sbjct: 162 GEFARFLRADTAEREQLLEKLFATQRFGGV 191 >UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria RepID=D1X3K2_9ACTO Length = 1020 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 27/203 (13%) Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK-----FAQG 901 GE+ + +Q AD ++ + + Q+ E L L D RK + Sbjct: 817 GELTRLSRQAADE-------VRMLGPVRQEYERVARLAGLAAGTSADNERKMRLEAYVLA 869 Query: 902 LTLDNLVHLANQQLTRLH-GRYLL--------QRKASEALEVEVVDTWQADAVRDTRTLS 952 L+ + A +L R+ GRY L R+A L + VVD W + RDT TLS Sbjct: 870 ARLEQVAAAATARLQRMSSGRYTLVHSDARTGGRRAG--LGLHVVDAWTG-SERDTATLS 926 Query: 953 GGESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 GGE+F SLALAL L+D+V+ + R+D+LF+DEGFG+LD +TLD LD LD+L + Sbjct: 927 GGETFFASLALALGLADVVTEEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERDR 986 Query: 1010 TIGVISHVEAMKERIPVQIKVKK 1032 ++G++SHV ++ RIPV+++V K Sbjct: 987 SVGIVSHVADLRRRIPVRLEVVK 1009 Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 17/196 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + ++DF + +S GLF + GPTGAGKT++LDA+C ALY P Sbjct: 1 MRLHRLSITAFGPFGATQEVDF--DALSSAGLFLLHGPTGAGKTSVLDAVCFALYGAVP- 57 Query: 61 LSNVSQSQNDLMTRD--TAECLAEVEFE--VKGEAYRAFWS--QNRARNQPDG-NLQVPR 113 QS + D A+ EV+ E V G S Q R + + DG L+ + Sbjct: 58 --GARQSPGASLRSDHAPADLPTEVQLELTVGGRRLEVTRSPAQPRPKKRGDGFTLEKAQ 115 Query: 114 VELARCADGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 L R D + L+ ++ E L G+ +F + +LL QG FA FL + + R Sbjct: 116 SRL-RGHDPERGWQALSKSHQEIGEELTRLIGMSRDQFCQVVLLPQGDFARFLRSDAEAR 174 Query: 170 AELLEELTGTEIYGQI 185 +LL L T + + Sbjct: 175 GKLLGRLFDTRRFAAV 190 >UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema pallidum RepID=SBCC_TREPA Length = 1047 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 14/181 (7%) Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLL 924 +Q+AQ TQ+ L+ + K F +A L + AN +L ++ GRY L Sbjct: 858 KQLAQKTQESAKLITLSDELNGINQKKIQFDAWALISFLHEITAYANIRLQKMSEGRYHL 917 Query: 925 Q-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 + + + L + V D + +VR + TLSGGE+F+ S++LAL L+D + S Sbjct: 918 RVADSHVNARGYQGLALLVADAYTG-SVRPSATLSGGETFMASISLALGLADSIQTRSGG 976 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +DSLF+DEGFG+LD +LD A+ LD + + IG+ISHV ++ RIP +I +KK N Sbjct: 977 IVLDSLFIDEGFGSLDEASLDKAIGILDEIREGSRMIGIISHVHELRTRIPHKILIKKTN 1036 Query: 1035 G 1035 Sbjct: 1037 A 1037 >UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB8_HELMI Length = 1023 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 152/563 (26%), Positives = 231/563 (41%), Gaps = 88/563 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L ++ G IDF LF I GPTGAGKTT+LDAI ALY +T Sbjct: 1 MKPLKLTMQAFGPFAGVQVIDFN--ELGGQSLFLIHGPTGAGKTTILDAITFALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWS--QNRARNQPDGNLQVP------ 112 + E +F + GE YR Q R R + +G + Sbjct: 59 GEREGRQMRSHHASPKVETEVIFDFALGGEVYRIARKPEQERPRQRGEGMTTIAAAATLW 118 Query: 113 -RVEL---ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 R L A +G +LA + K E L GL +F + ++L QGQF L A KE Sbjct: 119 RRTGLPLDAESPEGAVLAHQPKRVNEEVLRLLGLRSAQFRQVVILPQGQFRQLLMAGSKE 178 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKL-QAQASGVTLLTPEQVQSLTASL-- 225 R E+LE+L TE+Y I ++ K E+ L Q QA + E+V L L Sbjct: 179 REEILEKLFRTELYRLIEEAFKDRAKKLEEEVAALRQEQAFILVEAGLEKVDDLAERLDD 238 Query: 226 -QVLTDEEKQLITAQ----QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + DE+ Q++ A Q +++L R E + +R + L Q L E++ + Sbjct: 239 HRRERDEKAQIVEAATASVQAAREALEQGRRDKEKLERWARLEAELDQLLKEQDGVMEKE 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 A L AQ A L A +R N+R Q R + H A+ Sbjct: 299 ARLLRAQKAAGL-----------ADAESVR------NSRRQEAERERQACARHEAEYGKA 341 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSD--------REHLRQWQQQLTHA 392 L +Q+Q+ ++E RQ + A R ++ ++ R +WQ+Q+ A Sbjct: 342 LLRQKQAEERLVEEQS--RQKVRDEAQKRLTVLEELAEKVATLAPLRRACEEWQRQVAEA 399 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG----------QIVPQQKRL 442 ++K + L E+A Q RQ L+ G Q + ++ Sbjct: 400 QKKESRLQM--------ELAELQKQTDRLAKRRQTLLVEVGKAEFLETAAKQAIRASEKR 451 Query: 443 AQLQVAIQ-------NVTQEQTQRNAA---LNEMRQRYKEKTQQLADVKTICEQEARIKT 492 A+L+ A Q + + +++R A L E R+R+ E T C ++ + Sbjct: 452 AELEAARQRFRKVEADYKRTESKRQACEENLAEARRRFDEMTD--------CWRKGQAAI 503 Query: 493 LEAQRAQLQAGQPCPLCGSTSHP 515 L L+ G+ CP+CGST+HP Sbjct: 504 LA---GALKTGEACPVCGSTAHP 523 Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 32/212 (15%) Query: 858 DNRQQQQTLMQQIAQMTQQVEDW-----------------GYLNSLIGSK--EGDKFRKF 898 D +++ TL QIAQ + +E + G+L + + EG F++F Sbjct: 808 DALKKEATLKDQIAQEERWLERYRQLEKYSKAREGRYRVLGHLARVANGRNAEGVTFQRF 867 Query: 899 AQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRT 950 L +++ AN++L + GRYLL+R A+ L++ V D + + R T Sbjct: 868 VLAAFLSDVLLAANERLKVMSRGRYLLERTSDRARANAAGGLDMVVFDHYTGQS-RPVAT 926 Query: 951 LSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 LSGGESFL +L+LAL L+D+V + ++++F+DEGFG+LD E+LD A+ AL L Sbjct: 927 LSGGESFLAALSLALGLADVVQSYAGGIHLETIFVDEGFGSLDPESLDLAVKALVDLQQE 986 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 G+ +G+ISHV ++ER+ +++++K N G S Sbjct: 987 GRLVGIISHVAELRERVDARLELEK-NDKGSS 1017 >UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEB9_9ACTO Length = 1024 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 24/239 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LR+ + G+ +DF+ F +GLF + GPTGAGK+TL+DAI ALY + R Sbjct: 1 MKIRWLRIVGIGPFAGKHTVDFS--AFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVAR 58 Query: 61 LSNVSQSQ---NDLMTRDTAECLAEVEFEVKGEAYR-----AFWSQNRA--RNQPDGNLQ 110 + S+ + N + D +E A++ FEV YR A+ + RN ++ Sbjct: 59 TKDASKDRLRSNHISDSDPSE--ADLVFEVGTGIYRVTRTPAYTPAGKKSQRNSKSTLMR 116 Query: 111 VPRVELARCADG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 V VE DG + +A +D + GLD +F ++++L QG+F+ FLNA Sbjct: 117 V--VEDPDAPDGWRTVEPIASGPRDVGSEIPAIVGLDKDQFLQTIVLPQGKFSQFLNATS 174 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 R ++L ++ T+IY + + + S++ +E+ + A G E+V+SL A+ Sbjct: 175 DAREQILRDIFDTQIYVDFTKALVDAAASSKRGIEERRVAAIGAF----ERVRSLDAAF 229 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 21/158 (13%) Query: 904 LDNLVHLANQQLTRLH-GRYLL---------QRKASEALEVEVVDTWQADAVRDTRTLSG 953 L+ ++ AN +L + GRY L RK+ L + DT DA+R RTLSG Sbjct: 874 LEEVLAAANPRLAAISSGRYELVSVPDDGTASRKSGLGLAIVDHDT---DALRSPRTLSG 930 Query: 954 GESFLVSLALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKT 1010 GE+F SLALAL L+D+VS + + ++F+DEGFG+LDS TL + L AL +G+T Sbjct: 931 GETFYTSLALALGLADVVSAEAGGVELRTMFIDEGFGSLDSHTLSLVMAQLQALRCAGRT 990 Query: 1011 IGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 +GVISHVE M +I QI+V+ + G ST +V+ Sbjct: 991 VGVISHVEEMATQIADQIQVRPLPEGG-----STLSVR 1023 >UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8MJ39_ALKOO Length = 1174 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 12/234 (5%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 L++K +NS E I+F R GLF I GPTG+GK+++LDAI LALY N++ Sbjct: 6 LKIKGINSFHNEQIINFNR--LVEKGLFGIFGPTGSGKSSILDAITLALY------GNIA 57 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA-RNQPDGNLQ--VPRVELARCADG 122 + + + + EFE+ + R + R + + +G ++ V R+ + Sbjct: 58 RDSKEFINTEADRGEVSFEFEILDGSLRKTYRLERGIKRKKNGGIETTVARIIEINGEEV 117 Query: 123 KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIY 182 +LAD V + GL+ FTRS++L QG+F+ FL +ER +LE + G E Y Sbjct: 118 TVLADSVTSVNNEVIRVIGLNAEDFTRSVVLPQGKFSEFLKLTGRERRNMLERIFGLEQY 177 Query: 183 GQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 G+ I + + K + L+ Q + + ++ L +L EEK L Sbjct: 178 GKNIVEKINAERKKYDAKRMDLEGQLKSYEGVNESYYKEVSEKLHLLLVEEKAL 231 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 144/568 (25%), Positives = 269/568 (47%), Gaps = 100/568 (17%) Query: 490 IKTLEAQRAQLQAGQPCPLCGSTS-HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 I+ LE + L + L G +E Y+ + + +R+ L +++K GE T Sbjct: 665 IRKLEVEIPALMKEREAYLQGKNKLEEGIERYKE-KISLANTRITELSTKIEKDGENQDT 723 Query: 549 LRGQLD----------AITKQLQRDENEAQSLRQDEQAL-TQQWQAVTASLNITLQPLDD 597 +R +LD AI +++ +D L+ ++ A+ ++ + + + + L D Sbjct: 724 IRLKLDERSQRIKYLSAIIEKINKD------LKIEDIAVEYERIKEMDKERSKKEKELKD 777 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 ++ ++ ++ Q+ LQ ++ A N + ++ QQQ++ ++ L+L Sbjct: 778 LRKAVEMEN---------RQKETLQNEVNALNLEKVKNQQQLDGNKE---------KLSL 819 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 +E E + T +++ TALQN +Q++ + EL E Sbjct: 820 ARE---EIKMLTDGNNPTAYK------TALQNEMQKVEA------EEKELKGRVEKGRGI 864 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ--FDTA--LQASVFDDQQAFLAAL 773 ++ E+ +A + + L Q+ L Q L+K + F + +Q +F+DQ+ L L Sbjct: 865 QQSKLEEKAIA-ENNKVNLVQEYALKVQELEKLSKEKGFSSIEEIQGYLFEDQK--LDIL 921 Query: 774 MDEQTLT--QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV-EQIQQ 830 DE T +++++ QNLE R + L DG A+TV E +++ Sbjct: 922 EDEITAYDDEVKKVNQNLE---RIQKAL-----------------DGRAITVDQWETLEK 961 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSK 890 L E GE++Q LK + + L ++ ++T Q++ L+ ++ Sbjct: 962 SLTTKKNIQEEKAKEIGEVQQTLKDTNVKLEAMKQLKKEENKITHQLDLLSELSKML--- 1018 Query: 891 EGDKFRKFAQGLTLDNLVHLANQ------QLTRLHGRYLLQRKASEALEVEVVDTWQADA 944 EG++F ++ + ++ L ++A + +TR GRY L+ +S + D + Sbjct: 1019 EGNRFVEY---VAINQLKYIAREASKWLKDITR--GRYALELDSSGNFIMR--DDFNGGI 1071 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALD 1002 R T TLSGGE+FL SL+LALALS + K ++ FLDEGFGTLDS+ L+ + AL+ Sbjct: 1072 RRATNTLSGGETFLTSLSLALALSSHIQLKGSAPLEFFFLDEGFGTLDSDLLEIVMTALE 1131 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKV 1030 L++ ++G+ISHVE +K R+P+++ V Sbjct: 1132 RLHSEKLSVGIISHVEELKNRVPIKLMV 1159 >UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E3_9FIRM Length = 1026 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 152/563 (26%), Positives = 253/563 (44%), Gaps = 90/563 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR++ S E +DF A I G TG+GKTT+LDAI ALY E+ Sbjct: 1 MRPLKLRIQAFGSYVDEQILDFE-TALADAPFLLIHGVTGSGKTTILDAIVFALYGESS- 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVE--FEVKGEAYR-----AFWSQNRA---RNQPDGNL- 109 ++ + + + + EVE F + YR A++ +R R G L Sbjct: 59 -GDIREGAMLRSSTASPDRTTEVEYVFALGQRRYRVLRSPAYFRMSRGKMTRRAATGQLF 117 Query: 110 QVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 ++P V + + K+LA + D E + L G D +F + +LL QGQF FL A+ K+R Sbjct: 118 RLPNV--GKTGEEKLLAANITDVSERISQLIGFDADQFRQVVLLPQGQFQRFLLAEVKDR 175 Query: 170 AELLEELTGTEIYGQISAMVFEQ----HKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 + +++ + TE Y +I ++ ++ ++A+ E E+ A G+ L A Sbjct: 176 SAIMQRIFRTERYQRIEEVLTKEAQQLERTAQAERER----AEGI----------LRAEG 221 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 +DE + ++ +E + RQDE+ +E + Q++ ++A E AQ +L+A Sbjct: 222 MASSDELRTRLSELSEE------IRRQDEILREHEKVQKSARRAREEGAAAQQKLSARDA 275 Query: 286 AQ-----------PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMAL-------- 326 AQ RN R R L R IE +NT A Sbjct: 276 AQSDLEKKREQAESVRNFRVRLSRAQRAQPVLYKERSYIEALNTERTRREAYASAAKDCA 335 Query: 327 RASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQ 386 A H A+ + L++ + + Q ++ R+ + A ++ + TS LR + Sbjct: 336 AAKTEHDASIEC--LKKVEAHADEHTQNVEQLRRMRD-YAPLANRYQECTS---ALRDLR 389 Query: 387 QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQ 446 + E+K + AA LT A ++ E+R R H + + +IV Q+K+ QL+ Sbjct: 390 VRAAEGEEKYESGAAEIERLT-----EAQKKYEEERA-RLHQILVGSEIVQQEKK--QLE 441 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQ-------LADVKTICEQEARIKTL-----E 494 Q + + + AL R R K+ ++ L+DV+T + R++TL Sbjct: 442 -HCQQASDQIRELEDALTSARTRVKKSQKKLQTAEEALSDVRTT---QRRLRTLYDMGSA 497 Query: 495 AQRAQ-LQAGQPCPLCGSTSHPA 516 A+ AQ LQA PCP+CGS +HP+ Sbjct: 498 ARLAQTLQADTPCPVCGSLAHPS 520 >UniRef50_B2S1H4 Exonuclease SbcC n=25 Tax=Borrelia RepID=B2S1H4_BORHD Length = 978 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 13/191 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L KN+ S KGE++I+F +G+F I+G TGAGK+T+LD I LALY R Sbjct: 30 MRINKLVFKNIASYKGEYEINFDVSVLKRSGIFLISGNTGAGKSTILDCITLALYARIYR 89 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L N++ S +++ ++ F V + Y +F N + + P+ + C Sbjct: 90 LDKNIADS----ISKGFNSAYVKLTFTVSEKVYESFIELNIRQKET------PKNMILSC 139 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +DG ++ +K D L +L LD+ +F ++++L QG F FL +KPK + +++ + Sbjct: 140 LSDGSLIENK-DDVLAYIKSLCRLDFEQFCQTVILPQGNFQEFLTSKPKSKTAIIDNIFN 198 Query: 179 TEIYGQISAMV 189 + Y I + Sbjct: 199 LKKYDDIEIFL 209 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 21/225 (9%) Query: 838 KLRENTTSQGEIR-QQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE-GDKF 895 KL+ N SQ EI + + + N QTL +++ +E+ N LI E DK Sbjct: 755 KLKSNFMSQIEISSKDISKYEANFSSLQTLKAELSAQEINLENIK--NELISVNERNDKL 812 Query: 896 -------------RKFAQGLTLDNLVHLANQQ-LTRLHGRYLLQRKA-SEALEVEVVDTW 940 + + Q +D ++ ++N++ L+ + + L+ S+ V Sbjct: 813 EILKKVVTTSPSLKYYVQSFLIDEILSISNKKYLSIILPDFELEINTDSKDFNFLVKSKR 872 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLV-SHKTRIDSLFLDEGFGTLDSETLDTALD 999 + R +TLSGGE FLVSL+L+LALSD++ + +I++ FLDEGFG+LD +TL + Sbjct: 873 DGNMTRSVKTLSGGERFLVSLSLSLALSDMIRDSELKIEAFFLDEGFGSLDEDTLKMVIP 932 Query: 1000 ALDAL-NASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 + L G+ IG+ISHV +KE I QI V KI+ + +ES Sbjct: 933 KISELQRVDGRQIGIISHVSYLKEEIKTQIVVSKISTVSNITIES 977 >UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum RepID=C6VPR9_LACPJ Length = 1061 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 110/194 (56%), Gaps = 19/194 (9%) Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGD----KFRKFAQGLTLDNLVHLANQQLTRL- 918 Q +M Q ++ + L +++ K+G+ K + L +++ AN L Sbjct: 866 QQIMHQQGTFAKRFAEITSLYNIMTGKDGNDHKLKLETYVVQNYLQRVLNYANDHFINLL 925 Query: 919 -HGRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 + RY + ++ L++ V D ++ R + TLSGGE+F+ +L++AL+LS++ Sbjct: 926 SNNRYTFELAAEASDNRSDHGLDINVYDNETGNS-RSSNTLSGGETFIAALSIALSLSEV 984 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 V ++ +ID+LF+DEGFG+LD ETL+ A+ AL+ + + +GVISH+E+MK I Q Sbjct: 985 VQSSANGVQIDALFVDEGFGSLDDETLEKAMQALETI-GENRMVGVISHIESMKRTIGQQ 1043 Query: 1028 IKVKKINGLGYSKL 1041 + +KK+ G G S + Sbjct: 1044 VLIKKM-GDGRSTV 1056 >UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T8_ERYRH Length = 1021 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 12/160 (7%) Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVE 935 N + K+ + Q D +V AN++ T + RY+L R+ L+++ Sbjct: 851 NGDLSGKQKIALEHYVQSAYFDYIVEEANKRFTPMTSNRYVLLRQEKAERLNTKSGLDLD 910 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + +R ++LSGGESF SL+LAL LSD+V S R+D+LF+DEGFGTLD Sbjct: 911 VYDQYTG-KIRSVKSLSGGESFKASLSLALGLSDVVQRFSGSVRVDALFIDEGFGTLDEA 969 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +L A+ +L L + + +G+ISHV +K I QI + K Sbjct: 970 SLQQAMKSLTDLAGTAEYVGIISHVPELKTLIEQQIIISK 1009 >UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CKX6_9FIRM Length = 1083 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 12/149 (8%) Query: 898 FAQGLTLDNLVHLANQQ-LTRLHGRYLLQR-------KASEALEVEVVDTWQADAVRDTR 949 + Q D ++ AN + +T G+Y L+R K LE+ V+D + + R + Sbjct: 925 YIQMAYFDRILRRANLRFMTMSSGQYELKRQKAPEDKKGKSGLELNVIDHYNG-SERSVK 983 Query: 950 TLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 TLSGGESF SL+LAL LSD + + ++++F+DEGFG+LD E L+ A+ AL L Sbjct: 984 TLSGGESFQASLSLALGLSDEIQANAGGICLEAMFVDEGFGSLDEEALEQAIKALGNLTQ 1043 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKING 1035 +++G+ISHV +KERI +I V K G Sbjct: 1044 GNRSVGIISHVAELKERIENKIIVTKERG 1072 >UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYY9_9SYNE Length = 1002 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 151/302 (50%), Gaps = 26/302 (8%) Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQL-EQLKQNLENQRRQAQTLVT 801 A+ L++A ++ L S F D QA +AAL E T+ QL Q + E + + + L+ Sbjct: 696 ASTRLEQASSRLARDLAGSEFADGQAVVAALKPE-TMRQLWAQRIKAFETEVIELRGLLA 754 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 LA Q RPD AL + A ++ E +Q EI Q+L + + Sbjct: 755 SA--DLADLPQERPDTAAALEAVLAADAARTAAV-ERHSEARGAQTEI-QRLTSEHSSGA 810 Query: 862 QQQTLMQQIAQMTQQVED--WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL- 918 + ++ AQ+ V D G I +++ L ++ ANQ+L + Sbjct: 811 GELASRREQAQLFSAVADRCSGRTAPFI------SLQRWVLSAYLGDICRYANQRLELMT 864 Query: 919 HGRYLLQ------RKASEA-LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 GRY L+ R +A L + V+D + + R+ +LSGGE+F SLALAL ++D V Sbjct: 865 SGRYQLRLTDEGGRGGRQAGLGLRVLDAYTGEE-REVSSLSGGETFQASLALALGVADTV 923 Query: 972 ---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 S +++LF+DEGFGTLD + L A+D LD L A G+ +G+ISHV +KERI I Sbjct: 924 EAHSGGVHLEALFVDEGFGTLDPDNLQLAMDELDRLRAGGRMVGIISHVGGLKERIRYGI 983 Query: 1029 KV 1030 +V Sbjct: 984 EV 985 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 104/347 (29%), Positives = 153/347 (44%), Gaps = 45/347 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LR++ +I F + + GLF I G TGAGKT LLDA+C ALY E Sbjct: 1 MKPHLLRIEAFGPYAEPVEIGF--DVLSQEGLFLIHGSTGAGKTFLLDALCFALYGEVSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ--NRARNQPDGNLQ-VPRVELA 117 +V ++D A +EF G YR S + + +G + P+ L Sbjct: 59 DRSVKALKSD-HAEPAAVPRVSLEFSSGGARYRVERSPAYTAPKTRGEGTTEKAPQAVLF 117 Query: 118 R--CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R A + +A + + L GLD +F + +LL QG+FA L A+ +ER LL+ Sbjct: 118 RLVSAGWEPIASRTTEVSREVQGLVGLDAAQFRQVILLPQGKFAEVLRARAEEREALLKT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTE-------LEKLQAQASGV-TLLTPEQVQSLTASLQV 227 L T IY Q + + E+ K +R E LE ++ QA+ T PE V + Sbjct: 178 LFDTVIYEQAGSWLEERAKFSRIEVAEQNRSLEVMRQQAAHEWTPFAPEPVVA------- 230 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL-SLA 286 +Q+ L L Q + + Q +L+QA+A E AQ AA+ LA Sbjct: 231 ------------PNDQEGLERLVEQ--IAAVVAGTQSSLKQAVATLESAQTAKAAVEKLA 276 Query: 287 QPARNLRPHWERIAEHSA---ALAHIRQQIEEVNTRLQSTMALRASI 330 R R+ E A A+A RQ++ +R + ALR S+ Sbjct: 277 DRWDRRRAALTRLTELEAKQEAVADFRQRL----SRAERAEALRPSV 319 >UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNM3_CLOPH Length = 1038 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 161/309 (52%), Gaps = 25/309 (8%) Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ----AQTLVT 801 +L++ + + L + FD ++++LA L E + Q +++ ++ E Q + + LV Sbjct: 741 TLEEEEKAYQRKLTETSFDSEESYLACLWTEDKIEQTQKMIEDYEKQVSEQHLMIEKLVN 800 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + ET + Q D + +++ + ++++R N + ++QL +A Sbjct: 801 EIKETDSVDIQILKDSRDEINAQKSVCERQKEEVNRRIRNNDQIYKDAKKQL--EAKGEI 858 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HG 920 Q++ L I ++++ N + K F ++ Q D ++ AN++L ++ Sbjct: 859 QRKYL--SINELSKTA------NGELTGKVKIAFEQYVQAFYFDTVIEEANKRLRKMTFS 910 Query: 921 RYLLQR------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV--- 971 +Y L R ++ LE+ V+D + R ++LSGGESF +LALAL LSD++ Sbjct: 911 QYTLHRADSVNLRSQGGLEIFVLDHYTGKQ-RTVKSLSGGESFKAALALALGLSDVIQSY 969 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 + +DS+F+DEGFG+LDSE+L+ A++ L +L + + +G+ISHV +KERI +I + Sbjct: 970 AGGIELDSMFIDEGFGSLDSESLEQAIETLISLTSGNRLVGIISHVTELKERIDKKILIH 1029 Query: 1032 KINGLGYSK 1040 K Y K Sbjct: 1030 KTMEGSYIK 1038 >UniRef50_A8SR38 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR38_9FIRM Length = 923 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 80/238 (33%), Positives = 133/238 (55%), Gaps = 27/238 (11%) Query: 820 ALTVTVEQIQQ-ELAQTHQKLRENTTSQGEIRQQLKQDADNR-QQQQTLMQQIAQMTQQV 877 ALT T+E ++ ELA+ + G IR + QD ++R + +T+M I++ + ++ Sbjct: 676 ALTDTLESAEKLELAKLEEDKVAARNELGRIRLFM-QDGNSRIRANETVMANISRKSDEL 734 Query: 878 ----EDWGYLNSLIGSKEGDKFRK-------FAQGLTLDNLVHLANQQLTRLH-GRYLLQ 925 +++ + SL + G+ K + Q D ++ AN + ++ G+Y L Sbjct: 735 SAKEKEYVSVKSLYDTASGNVSGKNKINLEAYIQMSYFDRIIQRANLRFLKMSDGQYELS 794 Query: 926 R-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKT 975 R ++ L++ VVD + + RD ++LSGGESF+ SL+LAL LSD V + Sbjct: 795 RVTDSSDKRSQIGLDLCVVDHYNG-SRRDVKSLSGGESFMASLSLALGLSDEVQASAGGI 853 Query: 976 RIDSLFLDEGFGTLDSE-TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +ID++F+DEGFG+LD+E TL A AL ++ K +G+ISHV +KE+I QI V+K Sbjct: 854 QIDTMFVDEGFGSLDTEKTLPQAYKALVSVTEGCKLVGIISHVTELKEKIDKQIVVEK 911 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 7/185 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L+L + G ++D T+ + GL+ +TG TGAGKTT+ DAIC ALY E Sbjct: 1 MRPLNLTMSAFGPYAGVQELDMTQ--LGAEGLYLVTGDTGAGKTTIFDAICYALYDEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 ++ + E+ FE G+ YR + + R + G LQ VEL Sbjct: 59 AGRDARMMRSTYADVDTDTYVELTFEHIGKIYRVKRNPSYERRKKKGEGTTLQEAAVELY 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 D ++ ++ K L L G+D +F++ +L+QG+F L A+ +R ++ +L Sbjct: 119 -LPDDSVIVNRTKANSYLQ-ELMGVDREQFSQISMLAQGEFKELLVAESSDRQKIFSKLF 176 Query: 178 GTEIY 182 T Y Sbjct: 177 HTSRY 181 >UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR2_9CHRO Length = 1021 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 89/139 (64%), Gaps = 13/139 (9%) Query: 904 LDNLVHLANQQLTRL-HGRYLL-------QRKASEA-LEVEVVDTWQADAVRDTRTLSGG 954 L+ + AN +L+++ GRY L QR+ S+A L + V+D + + R+ +LSGG Sbjct: 867 LEEICGYANHRLSQMTAGRYELRLSDASGQRRGSKAGLGLRVLDAYTGEE-REVSSLSGG 925 Query: 955 ESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 E+F SLALAL ++D V S +++LF+DEGFG+LD ++L A+D LD L G+ I Sbjct: 926 ETFQASLALALGVADTVQAHSGGVVLEALFIDEGFGSLDPDSLHLAMDELDRLREGGRMI 985 Query: 1012 GVISHVEAMKERIPVQIKV 1030 G+ISHV A++ERI ++V Sbjct: 986 GLISHVAALRERIRTGLEV 1004 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 12/195 (6%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAEC 79 + + +GLF I G TG+GKT LLDA+C ALY E ++ ++D + Sbjct: 18 VTICFDTLCRDGLFLIHGSTGSGKTYLLDALCFALYGEVSGERSLKGLRSD---HAPPQA 74 Query: 80 LAEV--EFEVKGEAYR----AFWSQNRARNQPDGNLQVPRVELARCADGKI--LADKVKD 131 L +V EF G +R A ++R Q + + + L R G+ +A V++ Sbjct: 75 LPQVSLEFSAAGGRWRVERQAACEVPKSRGQGTTS-KGAKAGLWRLLGGEPQPVAAGVQE 133 Query: 132 KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFE 191 A L GLD +F + +LL QG+FA L A+ ++R LL+ L T +Y + + Sbjct: 134 VGREVARLVGLDAAQFRQVILLPQGRFAEVLRARDEDREALLKTLFDTSLYERAMGWLAG 193 Query: 192 QHKSARTELEKLQAQ 206 Q K+A EL + Q Q Sbjct: 194 QAKAAEEELRERQRQ 208 >UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium acetobutylicum RepID=SBCC_CLOAB Length = 1163 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 17/207 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + +R+K LNS + E +I+F E GLF I GPTG+GKTT+LD+I L+LY E R Sbjct: 1 MKPIRVRIKGLNSFENEQEINF--EKLTKRGLFGIFGPTGSGKTTILDSITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S ++ M + EF++ G+ + + + R D R + A+ Sbjct: 59 KS------SNFMNTNCNSLNVSFEFQISGKEIKRYLVEREFR--RDNKTGSVRSKSAKIV 110 Query: 121 D-----GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 D ++L + K E + GL FTR+++L QG+F+ FL + KER +LE Sbjct: 111 DITGDEVEVLEEGAKSVNEKCQEIIGLSLDDFTRTVVLPQGKFSEFLKLEGKERRNMLER 170 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEK 202 L + YG + F+ + R E EK Sbjct: 171 LFNLQEYG--DELSFKLARKIRKEREK 195 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 9/155 (5%) Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLH----GRYLLQRKASEALEVEVVDTWQADAVRDTR 949 K +KF + + L+ L +++ + RL G Y L+ + + + D A RD Sbjct: 1006 KGKKFVEFVALNQLKYISIEASKRLKEITGGNYGLE--VDDNGKFIIRDYKNGGAKRDAS 1063 Query: 950 TLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 TLSGGE+F+ SLALAL+LS+ + + ++ FLDEGFGTLDS L+ +D+L+ +++ Sbjct: 1064 TLSGGETFVTSLALALSLSNQIQLRGSAPLELFFLDEGFGTLDSNLLEVVMDSLEKIHSE 1123 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKL 1041 ++G+ISH+E +KER+PV++ V G+G SK+ Sbjct: 1124 RLSVGIISHLEVIKERMPVRLIVSPAEAGVGGSKV 1158 >UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZD9_ENTGA Length = 1052 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 125/205 (60%), Gaps = 15/205 (7%) Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNL 907 ++Q+KQ+ ++ Q + QQ + +++ L+ +I + K ++ L + Sbjct: 846 KEQIKQNQRLLEELQIIYQQNTKQLEKISHLQQLSEVINGENEKKTSLERYVLQRFLTEI 905 Query: 908 VHLANQQLTRL-HGRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 + +AN +L RL GRY + ++S LE+++ D A ++R TLSGGESF+ Sbjct: 906 LEVANVRLARLTRGRYQFELADKVGSYRSSTGLEIDIYDD-NAGSLRRAHTLSGGESFIA 964 Query: 960 SLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 +LALA++L+D++ +++ I++LF+DEGFG+LD E+L+ A++AL+ + G+ IG+ISH Sbjct: 965 ALALAISLADVIQNRSGGIEIEALFIDEGFGSLDEESLEMAMEALEMIENEGRMIGIISH 1024 Query: 1017 VEAMKERIPVQIKVKKINGLGYSKL 1041 V ++ERI Q+ V + +G G SK+ Sbjct: 1025 VRELRERILQQV-VVQTDGSGQSKI 1048 >UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP3_9FIRM Length = 1020 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 123/579 (21%), Positives = 235/579 (40%), Gaps = 88/579 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + + K + IDFT+ + +F I+G TG+GKTT+ DAI AL+ E R Sbjct: 1 MKPVKLEMYGFMTYKNKTFIDFTK--IYDSKIFIISGDTGSGKTTIFDAISFALFGEIQR 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-VELAR 118 N ++D + D + FE+ G+ YR N+ + N+ V VE + Sbjct: 59 EGFNSKDIRSDFLGSDDPITYVDFYFEIDGKNYRIKRIPNQKAKKTRVNVNVSHSVEFYK 118 Query: 119 C--------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 +DG DK + GLDY + R M+L+QG+F+ FL + E+A Sbjct: 119 IENKNEILISDGPQKTDKK------IIEVIGLDYNQLNRVMILAQGEFSKFLKSNSDEKA 172 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELE-------------KLQAQASGVTLLTPEQ 217 ELL ++ + +Y +I + E K+++ L+ +L L+ + Sbjct: 173 ELLSKIFSSYLYKEIEEKLKEASKNSKRNLDMISNSLENEIVKNELLGDKVDDELIKLKD 232 Query: 218 VQSLT-----------ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL 266 Q + ++Q+ DE+ L + E LN+ +++E Q E + Sbjct: 233 FQKIIDIIEDLLLESEKNIQIKNDEKLSLNKNLENENSKLNFYEKENE-QIENYKNLFKE 291 Query: 267 QQALAEEEKAQPQLAA-LSLAQPARNLRPHWERIAEHSAA--------------LAHIRQ 311 ++ L E+E L L A+ + ++P++E + + + I + Sbjct: 292 KEKLLEDESFYKNLKKDLVYAEKSIAIKPYYESFLDLNKSQKDLKTKLDFENENSNFIEK 351 Query: 312 QIEEVNTRLQSTMALRASI--RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWR 369 ++EE T L + L I + ++ E+ + ++L E D+ ++ + ++ Sbjct: 352 ELEENKTYLGNKDELLKIIDKKKENIVKNLEILNKFENLQKIKDELDKNKKAFEDGKNYK 411 Query: 370 AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLR-QHL 428 ++E + + +K + L + L E T + +A Q+ Q+ Sbjct: 412 KSIENNLKEKEKINE------KIRKKSDELLDFSRNL---EKITKKSHNAYQKVFEIQNF 462 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA 488 I+ +K I+N+ E+ Q + A + EK + L D ++ Sbjct: 463 Y--EKAIINDEK--------IKNLNDEKIQFDKA-----NKAYEKAKILLDRAKENKKSI 507 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 +I R L+ CP+CG +E ++ + + Sbjct: 508 QINEF---RKDLKEKGICPICGRIYKGEIEFLESFDLDI 543 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 91/152 (59%), Gaps = 12/152 (7%) Query: 898 FAQGLTLDN--LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE 955 F + L+L N L + + Q T + + ++ + L++E++D +R +LSGGE Sbjct: 870 FRKILSLANIRLKEMTDGQFTMIRKKQTNDKRKNYGLDIEILDA-NTGKIRSEASLSGGE 928 Query: 956 SFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 SF+ SLALAL LSD +S + +ID+LF+DEGFGTL + L+ A+ ++ L+ K IG Sbjct: 929 SFIASLALALGLSDEISMENGGIKIDTLFIDEGFGTLSDDYLEKAIRTIEKLSYDNKFIG 988 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 +ISHV+ +K+ I +I+V YSK E + Sbjct: 989 LISHVKELKDAIDAKIEV------SYSKTEGS 1014 >UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5666E Length = 987 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 12/149 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQL-TRLHGRYLL-------QRKASEALEVEVVDTWQADAVR 946 R + L+ + A +L T GRY R L ++V+D + VR Sbjct: 828 LRSYVLAARLEEVALAATARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSG-TVR 886 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGESFL SL+LAL L+D+V+ +T +D+LF+DEGFGTLD+ETLD ++ LD Sbjct: 887 PAKTLSGGESFLASLSLALGLADVVAGETGGALLDTLFVDEGFGTLDAETLDVVMNILDE 946 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L A G+ +G++SHVE +++RIP +++V+K Sbjct: 947 LRAGGRVVGLVSHVEELRQRIPTRLRVRK 975 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 20/198 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L ++ G +DF + ++GLF + G TGAGKTTLLDAI AL+ P Sbjct: 1 MRLHLLEVEAFGPYAGREVVDF--DALGTDGLFLLHGDTGAGKTTLLDAIAFALFGVVPG 58 Query: 61 L-SNVSQSQNDLMTRDT-AECLAEVEFEVKGEAYRAFWSQN--RARNQPDG-NLQVPRVE 115 +V + + DL D E + +E V+G+ R S R + + DG Q RV Sbjct: 59 ARGDVKRLRCDLAEPDRQTEVV--LELTVQGQRLRIVRSPEYQRPKKRGDGFTTQQARVS 116 Query: 116 LARCA--------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPK 167 L DG I D+V +E L G+ +F + +LL QG+FA FL + Sbjct: 117 LTWVGEPPAGLPPDGSIRIDEVARTVE---RLLGMTAPQFFQVVLLPQGEFAKFLRSDTT 173 Query: 168 ERAELLEELTGTEIYGQI 185 ER +LLE L GTE + + Sbjct: 174 EREKLLERLFGTERFSDV 191 >UniRef50_A5HZ17 Exonuclease n=10 Tax=Clostridium RepID=A5HZ17_CLOBH Length = 1176 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 121/511 (23%), Positives = 219/511 (42%), Gaps = 71/511 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L +K LNS + +IDF E + GLF I GPTG+GK+++LDAI +ALY Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDF--ETLVNRGLFGIFGPTGSGKSSILDAITMALY----- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR-ARNQPDGNLQVPRVELARC 119 ++++ + DT EF++ R + +R + G + L + Sbjct: 54 -GDIARDSTQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTAARLVKN 112 Query: 120 A--DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + +I+ADK +D + ++ GL FTRS++L QG+F+ FL K R ++LE + Sbjct: 113 TYEEEEIIADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIF 172 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTL----------LTPEQVQSLTASLQV 227 G E YG+ + E+ + AR + S +TL ++ E++Q L + Sbjct: 173 GLEKYGK---KLLERIRKARN------KEISSLTLIEGRLEQYKDISKEKLQELKIQYEN 223 Query: 228 LTDEEKQLITAQQQEQQSL-----NWLTRQDELQQEASRRQQALQQALAEEEK------- 275 L +EK I +++E L N Q+EL ++ + + L EEK Sbjct: 224 LL-KEKSKIAKEKEESNKLYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEKG 282 Query: 276 -----AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 +P + LS + RN+ E A+ +R ++ L++ Sbjct: 283 KNALSVKPYIDELSKIESDRNINEE-----ELQTAMEQLRN----IDLNLKNIEEEYKKA 333 Query: 331 RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL-RQWQQQL 389 ++ L Q++ +L ++ + E RA Q+ ++E L R Sbjct: 334 SEDKEEKIPLLMQKENNLLQAIEIKKKVEVIKRE----RADLVQKYKEKESLIRNKNIDK 389 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 H E+ +N ++ + L +E+ +L ++R Q L + K +L + + Sbjct: 390 KHIEENINKISK-EVKLKEEEI-NSLKIDGDRREKIQKLYEI-------DKEYKRLNLEV 440 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 N+T+ + +L E +YK+ + D+ Sbjct: 441 CNITERINIKIKSLKEYELKYKDTLETQRDI 471 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 6/159 (3%) Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRT 950 G+KF +F L+ +V A+++L + GRY L+ + + D + +R T T Sbjct: 1020 GNKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMR--DDFNGGGIRPTNT 1077 Query: 951 LSGGESFLVSLALALALSDLVSHK--TRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 LSGGE+FL SLALALALS + K + ++ FLDEGFGTLDSE LDT + +L+ L + Sbjct: 1078 LSGGETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDR 1137 Query: 1009 KTIGVISHVEAMKERIPVQIKVKK-INGLGYSKLESTFA 1046 ++G+ISHVE +K R+P+++ V + G G SK++ ++ Sbjct: 1138 LSVGIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS 1176 >UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=A0PY82_CLONN Length = 1176 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 30/328 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L++ LNS + E I+F R GLF I GPTG+GK+T+LDAI +ALY Sbjct: 1 MKPRVLKISGLNSFEREQVINFNR--LTEKGLFGIFGPTGSGKSTILDAITIALY----- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW--SQNRARNQPD-GNLQVPRVELA 117 ++++ + T + + EFE+ G R + +N N+ D N + R+ Sbjct: 54 -GKITRTNKGFINTTTKDLIVSYEFEIGGAKDRKVYLAERNIKINKNDRYNTKYARLIEK 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 KI+A+ + + GL FTRS++L QG+F+ FL +E+ +LE + Sbjct: 113 NGDKSKIIAEGPTELQNQIHKIIGLTVDDFTRSVVLPQGKFSEFLKLGGREKRNMLERIF 172 Query: 178 GTEIYGQISAMVFEQHKSARTELEK---LQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 E YGQ ++V + K T L++ LQ + LT E ++ LQ+ E++ Sbjct: 173 ALEKYGQ--SLVEKIKKVRNTNLKERDVLQGELKKYENLTEEDYKAKQQELQLELQNEER 230 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL-------AQ 287 L ++Q + + E+ +E Q+ L + ++ K Q +L ++L Q Sbjct: 231 LKNEKKQ-------IDEKYEMYKEVWTLQKELDAFIDKKLKLQEKLEDINLKRESLKRGQ 283 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEE 315 A ++P + + + + R++++E Sbjct: 284 NAIKIKPFMDEVEATNKNIKDNREKLKE 311 >UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYM8_SACVD Length = 986 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 12/149 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEVVDTWQADAVR 946 R + L+ + A +L + GRY R L ++V+D + VR Sbjct: 828 LRSYVLAARLEEVAVAATARLRSMSQGRYSFVHSDAAGSRGTRGGLGLDVLDDYSG-MVR 886 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGESFL SL+LAL L+D+V+ +T +D+LF+DEGFGTLDSETLD + LD Sbjct: 887 PAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFVDEGFGTLDSETLDVVMGVLDE 946 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKK 1032 L A G+ +G++SHVE +++R+P +++V+K Sbjct: 947 LRAGGRVVGLVSHVEELRQRVPTRLRVRK 975 Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 12/210 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + G +DF + ++GLF + G TGAGKTTLLDA+ AL+ P Sbjct: 1 MRLHRLEVCAFGPYAGREVVDF--DALGADGLFLLHGDTGAGKTTLLDAVAFALFGAVPG 58 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWS--QNRARNQPDGNLQVPRVE-- 115 V + + DL DT + +E V+G R S R + + +G P Sbjct: 59 ARGQVKRLRCDLADADTPTEVV-LELTVQGHHLRIVRSPEYERPKRRGEGYTTQPAKASL 117 Query: 116 --LARCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 L+ DG ++ + + L G++ +F + +LL QG+FA FL A ER + Sbjct: 118 TWLSPPPDGGTAEAVTRIDEVGRIVERLLGMNAQQFFQVVLLPQGEFAKFLRADTTEREK 177 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELE 201 LLE L GTE + + + R ELE Sbjct: 178 LLERLFGTERFAVVEQWFRDLRAERRAELE 207 >UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycetales RepID=D1VDP9_9ACTO Length = 1068 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 65/153 (42%), Positives = 96/153 (62%), Gaps = 15/153 (9%) Query: 904 LDNLVHLANQQLTRLHG-RYLL--------QRKASEALEVEVVDTWQADAVRDTRTLSGG 954 L+ + H A+++L + G RY L R+ L + V+D W + R T TLSGG Sbjct: 918 LEEVAHAASRRLAAMSGGRYTLVHDTGERRDRRRKAGLGLLVLDAWTGRS-RPTATLSGG 976 Query: 955 ESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 E+F +L+LAL L+D+VS + ID+LF+DEGFGTLD ++LD ++ LD L A G+ + Sbjct: 977 ETFQAALSLALGLADVVSAEAGGHAIDALFVDEGFGTLDPDSLDEVMNVLDELRAGGRLV 1036 Query: 1012 GVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GV+SHV ++ RIP QI+V+K G S +E+T Sbjct: 1037 GVVSHVADLRLRIPTQIQVRK--GPSGSTVETT 1067 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + GE ++D R + GL + G TG GKTTLLDA+ ALY P Sbjct: 1 MRPHRLELVAFGAFPGEVELDLDR--LGAGGLVLLCGETGGGKTTLLDAVGFALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ--NRARNQPDGN-LQVPRVELA 117 L V ++ D A + +E+ V +R + +R R + DG Q P L Sbjct: 59 LRGVRDLRSHHAAPDVAPRV-RLEYSVPAGRFRVTRTPGWDRPRRRGDGTQRQHPTALLE 117 Query: 118 RCADGKILADKVKDK---LELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 R A+ +++ E+ L G+ +F + ++L QG+FA FL+A R LL+ Sbjct: 118 RWTGSGWAAEATRNEDVGHEVNGHL-GMRPEQFFQVVMLPQGRFADFLHADNDAREALLK 176 Query: 175 ELTGTEIYGQI-------SAMVFEQHKSARTELEKLQAQAS 208 +L + ++ + + H AR +L+++ A+ + Sbjct: 177 QLFSVGRFERVEQWLADRAKRAADDHGLARQDLDRVHAKVT 217 >UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI05_CUPTR Length = 1020 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 97/152 (63%), Gaps = 12/152 (7%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEALEVEVVDTWQADAVR 946 F++F LD ++ A+ +L + GRY+LQR +++ L++EV D A R Sbjct: 857 FQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVREQADQRSAGGLDIEVFD-HDTGAAR 915 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDA 1003 TLSGGE FL SL+LAL L+D+V + ++D+LF+DEGFGTLD E+LD AL L Sbjct: 916 PANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGTLDPESLDFALRTLLD 975 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 L +G+ +G+ISHV ++ERI V+++V+ +G Sbjct: 976 LQQAGRLVGIISHVTELRERIDVRLEVRPGSG 1007 >UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX1_9ACTO Length = 983 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 13/139 (9%) Query: 904 LDNLVHLANQQLTRLHG-RYLLQRKASEA--------LEVEVVDTWQADAVRDTRTLSGG 954 + ++ AN + G R+ L R +A L + V D+ + D R ++TLSGG Sbjct: 832 FEAVIAAANPFIASFSGSRFKLVRVDDDANSQARHGGLGIAVYDS-ETDQQRPSKTLSGG 890 Query: 955 ESFLVSLALALALSDLVSHKTR-ID--SLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 E+F VSLALAL L+++VS + ID S+ +DEGFGTLD ETLD L+ + +N SG+T+ Sbjct: 891 ETFYVSLALALGLAEVVSAEAGGIDFRSMLIDEGFGTLDPETLDKVLEGIKKINQSGRTV 950 Query: 1012 GVISHVEAMKERIPVQIKV 1030 G++SHVE ++ RI I+V Sbjct: 951 GIVSHVEELRRRISDGIEV 969 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 11/225 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+++ L + E +I F F S GLF + G TG+GK+T++DA+ ALY E Sbjct: 1 MRLIELNFAAIGPFPEEHRIRFA--DFESAGLFLLRGATGSGKSTIIDAVLFALYGEAAI 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQN--RARNQPDGNLQVPRVELA 117 ++++ S R AE+ FEV YR S +A N+ +L Sbjct: 59 KITSSSLRLRSNFARKEMNSYAELIFEVPSGIYRIQRSPAYVKAGNKNATAATAVLEKLV 118 Query: 118 RCADGKI----LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 D I LA K +D L + G+ +F ++++L QG+FA F+ A P R +LL Sbjct: 119 VVEDEVISREPLAAKPRDVNALIPEIVGIQADQFLQTVVLPQGKFAEFVRATPDARKQLL 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEK--LQAQASGVTLLTPE 216 +++ T+ + + + E+ ++AR + E+ L+AQ T+L E Sbjct: 179 QQIFKTQHFNTFTEKLKEKARAARAQYEETSLRAQQLTATILGAE 223 >UniRef50_C7G9Y6 Putative uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9Y6_9FIRM Length = 809 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 12/146 (8%) Query: 898 FAQGLTLDNLVHLANQQ-LTRLHGRYLLQR-------KASEALEVEVVDTWQADAVRDTR 949 + Q D ++ AN++ LT G+Y L+R K LE+ V+D + R + Sbjct: 651 YVQMAYFDRILIRANRRMLTMSSGQYELKREEETGSRKEKAGLELCVIDHYNG-TKRSVK 709 Query: 950 TLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 TLSGGESF SL+LAL LSD + + R+DS+F+DEGFG+LD + L+ AL AL L Sbjct: 710 TLSGGESFQASLSLALGLSDEIQSYAGGIRMDSMFVDEGFGSLDEDALEQALKALLQLTE 769 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKK 1032 + +G+ISHV +K++I +I V K Sbjct: 770 GNRLVGIISHVSELKDQIDKKIIVTK 795 >UniRef50_C4DGW1 ATPase involved in DNA repair n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DGW1_9ACTO Length = 810 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 21/241 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ + +DFT F FA+ GPTGAGK+T+LDAIC ALY PR Sbjct: 1 MRPLRLDMEGFGTFSKPTTVDFTGADF-----FALIGPTGAGKSTVLDAICFALYGRVPR 55 Query: 61 ----------LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ 110 S S + + D A +A + G+ S + PD Sbjct: 56 WGSGIEYALAPSATSGKVRLVFSADGACYVATRLVKRGGKGKVTTASAALEKLPPD---- 111 Query: 111 VPRVELARCAD--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 + L ++ G LA K E + GL + +FT+ +LL QG FA FL++ E Sbjct: 112 IDPSSLDNVSELIGTALAASAKAVGEQVERIIGLPFDQFTKCVLLPQGAFAEFLHSSGAE 171 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 R ++LE L G +Y I E+ KSA L +++ + S V +T E + + A ++ L Sbjct: 172 RRKILENLLGYSVYRDIQTAAGEEQKSAEAVLTRIEQELSRVAPVTDEAIAAADARVRTL 231 Query: 229 T 229 + Sbjct: 232 S 232 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 12/146 (8%) Query: 896 RKFAQGL---TLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 RKF L L LV A+ L RL G+Y L E V+D AD R +TL Sbjct: 656 RKFVNWLLEEALRELVAGASDILRRLTSGQYDLDYID---YEFYVIDHHDADLPRPVKTL 712 Query: 952 SGGESFLVSLALALALSD----LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 SGGE+F +LALALA+S+ + S ++S+ LDEGFGTLD+ TLD L++L S Sbjct: 713 SGGETFAAALALALAMSEQLAGMSSQGASLESILLDEGFGTLDAATLDQVAANLESLATS 772 Query: 1008 G-KTIGVISHVEAMKERIPVQIKVKK 1032 G + +GV++HV + ERIPV+ +V K Sbjct: 773 GNRLVGVVTHVAGLAERIPVRFEVSK 798 >UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW67_9BACI Length = 1121 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L LK ++S K IDF E GLF I GPTGAGK+T+LDAI LALY + R Sbjct: 1 MKPIELSLKGIHSFKETQTIDF--EELTEAGLFGIFGPTGAGKSTILDAITLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 ++ ++ + E F + G ++ ++ + Q +G+++ L + Sbjct: 59 ---APVNKEGIINHASDEMYTAFIFTLGTGNHQTSYKAERSFKLQKNGSVKQTVSRLIKG 115 Query: 120 ADGKI-LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + + LADK D + L GL+ FTR+++L QG+F+ FL K ER ++L+ L Sbjct: 116 VNSPVTLADKASDMDKSVIKLLGLELDDFTRAVVLPQGKFSEFLTLKGTERRKMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 E YG +++A + +H KL A + ++ EQ AS +++D++K+ Sbjct: 176 LEKYGDRLNAKL--KH--------KLDDTAHQLAVIKSEQAGLGDASKTMISDQKKEF 223 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 15/254 (5%) Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT-VTVEQIQQELAQTHQKL 839 +LE+ K+ L N+R++A ++ T+ D L LT E+I+QE + +++ Sbjct: 862 ELEKQKERL-NERKEAYKNSQESYRTIKNEM-----DNLQLTEAAREEIRQESRRLEKEM 915 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 + G +Q+++ ++ L ++ + +ED L + G +F +F Sbjct: 916 EDLYDRVGRKKQEIESLVKRAERYDVLEKERMTVVSLLEDLEKLQIVF---RGKQFVEFI 972 Query: 900 QGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 L + LA+++L L G++ ++ + + D R +LSGGE+F+ Sbjct: 973 AEEQLIQVSRLASERLYELTKGKFAIEIDSDGGFVIR--DDANGGIRRPVSSLSGGETFI 1030 Query: 959 VSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 SLALALALS + K + ++ FLDEGFGTLD L+T + AL+ L S ++G+ISH Sbjct: 1031 TSLALALALSMTIQLKGQHPLEFFFLDEGFGTLDEHLLETVIGALERLQTSDLSVGIISH 1090 Query: 1017 VEAMKERIPVQIKV 1030 V+ ++ERIP ++ V Sbjct: 1091 VKELRERIPRKLLV 1104 >UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MH53_BRAFD Length = 1022 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 11/139 (7%) Query: 904 LDNLVHLANQQLTRLHG------RYLLQRKASE-ALEVEVVDTWQADAVRDTRTLSGGES 956 LD ++ AN +L G R R A + L++ V+D + D VR TLSGGE+ Sbjct: 873 LDAVIEAANARLALFSGSDLELLRDTGARGARKTGLDLLVLD-RRTDQVRVPETLSGGET 931 Query: 957 FLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 F VSLALAL L+D+V + ++++LF+DEGFG+LD ETL+T + + L SG+ IG+ Sbjct: 932 FFVSLALALGLADIVMGEAGGVQMETLFIDEGFGSLDPETLETVVREIGRLAESGRVIGI 991 Query: 1014 ISHVEAMKERIPVQIKVKK 1032 +SHV MK +I QI V++ Sbjct: 992 VSHVGDMKAQIAEQIHVRR 1010 >UniRef50_C9LQV5 Putative RecF/RecN/SMC N domain protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQV5_9FIRM Length = 880 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 20/192 (10%) Query: 860 RQQQQTL--MQQIAQMTQQVEDWGYLNSLI-----GSKEGDKFRKFAQGLTLDNLVHLAN 912 +QQQ+TL + ++A+ ++++ L S + G G +F G LD + AN Sbjct: 678 KQQQETLDKLVKLAEKQKEIDKKYKLISNLWNIARGKDTGINLERFVLGALLDAVTEKAN 737 Query: 913 QQLTRLHG-RYLLQRKASE--------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLAL 963 +L + G RY L RK E L++EV D A R TLSGGE+FL SL+L Sbjct: 738 LRLMEMSGSRYELLRKRGERADARKTAGLDLEVYDANTGRA-RPAATLSGGETFLASLSL 796 Query: 964 ALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 AL L+D+V + +D++F+DEGFG+LDSE+LD A+ L L + IG+ISHV + Sbjct: 797 ALGLADVVQEYAGGVHLDAMFIDEGFGSLDSESLDLAMKTLQELKGQNRLIGLISHVGGL 856 Query: 1021 KERIPVQIKVKK 1032 +ERIP +++V K Sbjct: 857 EERIPAKLRVTK 868 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 112/426 (26%), Positives = 197/426 (46%), Gaps = 41/426 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LRL G+ +DF+ ++ LF I GPTGAGK+T+LDA+C ALY +T Sbjct: 1 MRPERLRLSAFGPYAGQEDLDFS--ALGNHTLFLICGPTGAGKSTILDAMCYALYGKT-- 56 Query: 61 LSNVSQSQNDLMTRDTA---ECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 S +S DL + + E +F + YR + S + + GN P VE Sbjct: 57 -SGAVRSGEDLRSNYVGYDRKTYVEFDFAIGDRHYRIYRSPTQLLERQKGNRSKP-VEHK 114 Query: 118 RCADGKILADKVKDKLELTAT--------LTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 AD + ++ ++K +T+ L G+ +F + +LL QG F L A +R Sbjct: 115 GKADFYEIDEEGREKAHITSKGVDSAVEELLGVGLEQFRQIILLPQGDFRKLLLADSSDR 174 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT 229 +++E+L T IY + E+ K ++ E Q + + VTLL V+ A L+ Sbjct: 175 QKIMEQLFQTGIYLAFEKKLQEETKKLESDYE--QGKQTRVTLLETCHVEEDDA-LKGKI 231 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 +E K+L++ +++ ++L+ +Q+ Q+E + + L A EKA QL L + Sbjct: 232 EENKKLLSEKEKVTKALS--IKQETFQKEYAGASK-LFDAFGRMEKAIEQLKQLERGKKE 288 Query: 290 R-NLRPHWERI------AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE-- 340 LR + I +E AA RQQ +++N L+S L+ AK++A+ Sbjct: 289 NIELRETVKMIKASQLVSEEWAAAESTRQQWKKINAALESI--LKGLPEKEKAKEAADKE 346 Query: 341 ---LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 L++Q+ ++ + Q+ + A + + D E ++ + E++L Sbjct: 347 LELLKKQEVDQKKKIEAKGKLNQYRDSA----ASYGKAAGDVEKYKKIYETAVKEEKQLQ 402 Query: 398 ALAAIT 403 AA++ Sbjct: 403 EKAAVS 408 >UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales RepID=B2GFI4_KOCRD Length = 1079 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 11/145 (7%) Query: 898 FAQGLTLDNLVHLANQQLTRLH-GRYLL------QRKASEALEVEVVDTWQADAVRDTRT 950 F L+ + +A++ L+R+ GR+ L + L +E+ D+W R T T Sbjct: 919 FVLAAKLEQVAAVASEHLSRMSSGRFTLVHTDQTRGGGKSGLGLEIDDSWTG-VRRGTET 977 Query: 951 LSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 LSGGESF SLALALAL+D+V + ID+LF+DEGFG+LD +TL+ L+ LD L Sbjct: 978 LSGGESFFTSLALALALADVVRAEAGGRDIDTLFVDEGFGSLDEQTLEQVLETLDGLRRD 1037 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKK 1032 G+ IGV+SHV MK+RI Q+ V K Sbjct: 1038 GRVIGVVSHVSEMKQRIDTQLVVTK 1062 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ + + G+ +DF E G+F + G TG+GKT++LDAIC ALY P Sbjct: 1 MRLHRMEITAFGPFAGQEVVDF--EGLNRAGVFLLNGETGSGKTSVLDAICFALYGTGP- 57 Query: 61 LSNVSQSQNDLMTRDTAEC----LAEVEFEVKGEAYRA----FWSQNRARNQPDGNLQVP 112 + ++ D A+ +VEF G + W + +R + Sbjct: 58 -TTAAKGGRKAQHSDHADPHTGPRVDVEFSAGGRRWHVSRTPAWREPSSRAASGWTERHA 116 Query: 113 RVELARCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 V L +G+ + + D + GLD +FT+ M+L QG+FA FL A KER Sbjct: 117 TVLLRESVEGQWMERGYRPDDVGQQIHHAIGLDREQFTQVMMLPQGRFARFLQAGSKERE 176 Query: 171 ELLEELTGTEIYGQI 185 ELLE L GT++Y I Sbjct: 177 ELLETLFGTDVYAGI 191 >UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM48_SYNFM Length = 1020 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/287 (28%), Positives = 146/287 (50%), Gaps = 26/287 (9%) Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F + + AA +D + + ++E+ + + R A+ + + A AQ + T Sbjct: 738 FSSVEDYRAAKLDRKDVDRMEREIADFHGRHRAARERLDR-AVAAAQGLE---------T 787 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E+++++ + + LR G +R Q Q A L ++ + G Sbjct: 788 PVLEELERKAREASEALRSAIARHGALRAQSDQLARWNADLHKLAGEMEAAQNRYGIVGR 847 Query: 883 LNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLLQR-------KASEAL 932 ++ + K G F++F LD+++ A+++L R+ + LQR +A+ L Sbjct: 848 ISEVANGKNAPGLTFQRFVLAALLDDVLDAASRRLRRMSRGRFDLQRSRERGDQRAAAGL 907 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 ++ V DT+ R TLSGGESFL SLA+AL L+D+V + R++++F+DEGFG+L Sbjct: 908 DLAVYDTYTG-TTRPVNTLSGGESFLSSLAMALGLADVVRAYAGGIRLETIFVDEGFGSL 966 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 D E+LD A L L + +G+ISHV ++ER+ +++V I G+ Sbjct: 967 DQESLDLAFQTLVDLQEGNRLVGIISHVPELRERVDARLEV--IPGI 1011 Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 99/217 (45%), Gaps = 20/217 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L E DF F I GPTG+GK+TLLDA+C ALY ET Sbjct: 1 MRPLKLTLSAFGPYASEQVFDF--RVLGDRSFFLIHGPTGSGKSTLLDAVCFALYGETSG 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWS--QNRARNQPDGNL-QVPRVEL 116 +V ++D R + +F + YR S Q R R + +G + Q P L Sbjct: 59 GERDVRHLRSD-YARASTPTRVTFDFSLGEAVYRITRSPEQERPRARGEGTVVQRPAAVL 117 Query: 117 -------ARCADGKILAD---KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 +G +LA +V D++E L G +F + ++L QGQF FL A Sbjct: 118 HDRTGLVDESREGALLAGQWTRVTDRME---QLLGFKSSQFRQVVMLPQGQFRKFLTADS 174 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKL 203 +ER +LE L TEIY +I V E + + LE L Sbjct: 175 RERQAILEVLFQTEIYRRIEEAVKEAAREIQHALEDL 211 >UniRef50_Q67MD3 DNA repair exonuclease n=1 Tax=Symbiobacterium thermophilum RepID=Q67MD3_SYMTH Length = 1200 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L S + +IDF RE + GLF I GPTGAGK+T+LDAI LALY R Sbjct: 1 MRPIRLAFAGLQSYREPQEIDF-RELMGA-GLFGIFGPTGAGKSTILDAITLALYGRVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ +M + + F + G YR S R ++ P + R+ Sbjct: 59 ----TRGTMGIMNLNENRLWVKFTFALGGTEYRVERSYRREKDTPSIRSEHARLVRVLPE 114 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 ++LAD+ ++ + L GL+ FTR+++L QGQFA FL +R E+L+ + Sbjct: 115 GDEVLADREREVTQQVTDLLGLEIDDFTRAVVLPQGQFAEFLKLTGSKRTEMLQRIFALS 174 Query: 181 IYGQI 185 YG + Sbjct: 175 QYGDV 179 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 7/154 (4%) Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTW 940 +L+ L G+ F F + + A+++L +L RY L+ A+ V D Sbjct: 1034 HLDELQKVLRGNAFVNFIAQEQMARVAADASRRLRQLTRDRYTLE--AAPDGSFLVRDET 1091 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSD---LVSHKTRIDSLFLDEGFGTLDSETLDTA 997 +R TLSGGE+FL SL+LALALS L H ++ FLDEGFGTLD E LD Sbjct: 1092 NGGTLRSVNTLSGGETFLASLSLALALSAQIQLHGHYP-LEFFFLDEGFGTLDPELLDVV 1150 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 + L+ L+ +GVISHV ++ R+ ++ V+ Sbjct: 1151 ISTLERLHFDRLNVGVISHVAELRNRLHRRVIVE 1184 >UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax=Actinomycetales RepID=Q5YQ97_NOCFA Length = 1060 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/106 (50%), Positives = 76/106 (71%), Gaps = 5/106 (4%) Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 AVR +TLSGGE+F+ SLALAL L+D V S +D+LF+DEGFG+LD++TLD + Sbjct: 957 AVRPAKTLSGGETFMASLALALGLADTVAAESGGVVLDTLFIDEGFGSLDADTLDAVMGV 1016 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 LD L A G+ +G++SHV+ M++RIP ++ V I G S+LE+T A Sbjct: 1017 LDELRAGGRVVGIVSHVDEMRQRIPSRLHV--IRGRDGSRLETTVA 1060 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 28/243 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + +DF + ++GLF + G TGAGKTT+LDAI ALY P Sbjct: 1 MRLHRLEMTAFGPFAQPTVVDF--DALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPG 58 Query: 61 LSNVSQS-QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVEL 116 S+ +D T + +E + G R S R + G+ + P+ L Sbjct: 59 ARGESKRLHSDHAPAQTPPRVV-LEATLGGRRLRLTRSPEFERPKLRGSGMRTEQPKATL 117 Query: 117 ARC-ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 G+ L+ ++ D E L G+ +F + +LL QG FA FL A+ ++R +LLE+ Sbjct: 118 EWLDGRGENLS-RIPDIGEEIVRLLGMSADQFFQVVLLPQGDFARFLRAENEDREKLLEK 176 Query: 176 LTGTEIYG----------QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 L T +G + SA EQ K +E+L AQ G L S+T S+ Sbjct: 177 LFDTRRFGVAEQWLAERRRASAADLEQRKQG---IERLIAQIRGAAGL------SVTESV 227 Query: 226 QVL 228 VL Sbjct: 228 GVL 230 >UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP63_9BACE Length = 1037 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 125/236 (52%), Gaps = 19/236 (8%) Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 + V ++ + + + + +RE + GE+ ++ + + + + ++ A + + Sbjct: 800 MRVDTQEAEAAVVRIEKLIREKSGHMGELYADIRANQEIADEFAKMSEERAGAMHKYRIY 859 Query: 881 GYL-NSLIGSKEGD---KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL---------QR 926 L N+ GS G F F ++ AN++L+ ++ G++ L + Sbjct: 860 ATLYNTANGSLTGSVKINFETFVLRQYFKKIISAANRRLSAMNDGQWCLMCRDIDNIDNK 919 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLD 983 L+++V D ++VRD +TLSGGE+F+ +LA+AL +SD++ ++T R+D++F+D Sbjct: 920 GRKSGLDIDVHDEL-TNSVRDVKTLSGGETFMAALAMALGMSDIIQNRTGAVRLDTMFID 978 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 EGFG+LD + A++ L L + IG+ISHV +KE+I Q+ V K G G S Sbjct: 979 EGFGSLDDYSRQQAINILKGLADGRRMIGIISHVTELKEQIECQLVVSK-TGRGSS 1033 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 137/570 (24%), Positives = 227/570 (39%), Gaps = 115/570 (20%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP---RLSNVSQSQNDLMTRDT 76 I+F R GLF ITG TG+GKTT+ DAI ALY ET R N+ +SQ DT Sbjct: 13 IEFDR---GREGLFLITGDTGSGKTTIFDAIMYALYDETSGGNRSGNMMRSQYADADTDT 69 Query: 77 AECLAEVEFEVKGEAYRA-----FWSQNRARN----------QPDGNLQVPRVELARCAD 121 E FE Y + Q++ RN +PD L +P D Sbjct: 70 ---WVEFTFEYGNNIYSVRRNPEYIRQSKRRNADGSARYTTEKPDVTLTMP--------D 118 Query: 122 GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEI 181 G K+ + GLD +F + +++QG F L A +R E+ + TE Sbjct: 119 GSEFTGNKKEVNGKIVEIIGLDAKQFAQVAMIAQGDFMKLLYADSDDRREIFSRIFRTED 178 Query: 182 YGQISAMVFEQHKSARTELE---KLQAQASG---VTLLTPEQVQSLT--------ASLQV 227 Y +I + ++K+ +LE K+ G VT E+ + L SL + Sbjct: 179 YQRIQYELQARYKNIYGQLEDNRKIYDSRIGQIKVTEAYNERYRQLCERKEPDYEESLTL 238 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQA------LAEEEKAQPQLA 281 L D +I +QQ SLN +DEL + A+ +A E +KA + Sbjct: 239 LGD----IIASQQSLYDSLN--AEKDELTGQRDNNNAAIGRAKQTNSLFDEYDKAAAETL 292 Query: 282 ALSLAQP-ARNLRPHWERIA----------EHSAALAHIRQQ----------IEEVNTRL 320 + +P A +R E + + A +RQ I+E RL Sbjct: 293 DIEQRRPQADGMRRELEAAKRAAAVAVLDDKRTDAEEKLRQSEKRVKELATWIDEAAKRL 352 Query: 321 QSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE 380 A + I + +L+ Q + + + ++D F + +F + ++ Sbjct: 353 DRQSAELSGISAVYNDECPKLRLQAEEIRKSIPDYDTF-------GSRKKEFDALNNRKK 405 Query: 381 HLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQK 440 L + L E++L+ A +TA + A L ++ I ++ Sbjct: 406 DLNNQKAAL---EEELSRQKAYQDGITAFQNGNA--------DCMVRLEKVNNTISDKKD 454 Query: 441 RLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK------TICEQEARIKTLE 494 L +++ I+++ QEQ L +MR+R+++K+ + + + + C + + Sbjct: 455 TLDRIR-KIEDL-QEQ------LLKMRKRHEQKSSEYLNARNEYEHASACYERLEALFMS 506 Query: 495 AQRA----QLQAGQPCPLCGSTSHPAVEAY 520 Q QL+ G PCP+CGS HP A+ Sbjct: 507 GQAGILARQLEDGMPCPVCGSVIHPNPAAF 536 >UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YU05_9FLAO Length = 1011 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 99/173 (57%), Gaps = 6/173 (3%) Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR 921 +++ L++ +A++ ++ E+ + +L +G F ++ + L L AN + R+ R Sbjct: 832 KKEELLKALAKLQKRSENLKVMMNLF---KGAGFVQYVSSIYLRQLCDHANVRFHRM-TR 887 Query: 922 YLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDS-- 979 L + +E + E++D R +TLSGG++F VSL+LALAL++ V + D Sbjct: 888 NQLSLQLNENNDFEIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQANAQADKNF 947 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 F+DEGFGT D+E+++ + L L + +G+ISHVE +KE+IP + + K Sbjct: 948 FFIDEGFGTQDTESVNIVFETLTNLMKENRIVGIISHVEELKEKIPTALNIIK 1000 >UniRef50_B8FW38 SMC domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FW38_DESHD Length = 1165 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 100/186 (53%), Gaps = 11/186 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++K LNS +IDF++ S GLF I GPTG+GK+T+LD + LALY Sbjct: 1 MRPIKLKIKGLNSFIDTQEIDFSQ--LTSRGLFGIFGPTGSGKSTILDGMTLALY----- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAF-WSQNRARNQPDGNLQV--PRVELA 117 V++ + M + EF++ + + + + R++ GN++ ++ L Sbjct: 54 -GAVARGSTNYMNTNCESLQVSYEFQIAEKDTKTYRVDREFRRDKKSGNVRTHSAKILLI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +L ++V++ + + + GL FTR+++L QG+F+ FL + ++R E+LE L Sbjct: 113 TAGGETVLEEQVREVTKKSEEIIGLTLEDFTRTVVLPQGKFSEFLRLEGRDRREMLERLF 172 Query: 178 GTEIYG 183 + YG Sbjct: 173 NLQRYG 178 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 19/206 (9%) Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 S+ EI +K +N +++ L++ A++ +Q+ G L L G +F +F L Sbjct: 965 SKIEIETHVKTMKENLVKKKDLLKSQAELERQL---GLLRDLEKLFRGKRFVEFVAAHQL 1021 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVE------VVDTWQADAVRDTRTLSGGESFL 958 + A ++L + G + LEV+ + D A RD TLSGGE+FL Sbjct: 1022 KYVSMEAGKRLREITG-------GNYGLEVDQNGKFLIRDYKNGGAQRDATTLSGGETFL 1074 Query: 959 VSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 SL+LALALS + K ++ FLDEGFGTLD L+ +D+L+ L+ ++G+ISH Sbjct: 1075 ASLSLALALSAQIQLKGTAPLELFFLDEGFGTLDDNLLEVVMDSLERLHHDRLSVGIISH 1134 Query: 1017 VEAMKERIPVQIKVKKIN-GLGYSKL 1041 V+++K R+PV++ V GLG SK+ Sbjct: 1135 VDSIKNRVPVKLMVTPAQAGLGGSKV 1160 >UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1C0_9CLOT Length = 1172 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 15/231 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L +K LNS + IDF E GLF I G TG+GK+T+LDAI L+LY R Sbjct: 1 MRPIKLEIKGLNSYVNKQTIDF--EKLTERGLFGIFGKTGSGKSTILDAITLSLYGSIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-NLQVPRVELARC 119 N + N L + AE+ +E + + R ++ R++ G RV + + Sbjct: 59 --NTKEYINSLSEK------AEISYEFEIGSRRYVVDRHIIRSKAGGIKTSYARV-IEKL 109 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 DG +LADKV + E + GL FT+S++L Q +F FL +R +LE + Sbjct: 110 GDGSENVLADKVNEVNETIIKIIGLTANDFTKSVVLPQDKFNDFLKLGGIDRRNMLERIF 169 Query: 178 GTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQV 227 E YG ++ V + +T ++ LQ S +T E+ + L++ Sbjct: 170 NLEKYGKKLIENVRHRKNKTKTHVDMLQVSLSHYEEVTDEKYDEMIKKLEI 220 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 8/140 (5%) Query: 897 KFAQGLTLDNLVHLANQQLTRL----HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLS 952 KF + + ++L ++A + RL +GRY L+ ++ALE + D + R TLS Sbjct: 1019 KFVEYVATNHLKYIALEASKRLSTITNGRYALE--INDALEFVMRDNFNGGERRGVDTLS 1076 Query: 953 GGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSETLDTALDALDALNASGKT 1010 GGE+FL SL+LALALS + K ++ FLDEGFG+LD E LDT +++L+ L++S + Sbjct: 1077 GGETFLTSLSLALALSSQIQMKGNAPLEFFFLDEGFGSLDVELLDTVMESLEKLHSSNLS 1136 Query: 1011 IGVISHVEAMKERIPVQIKV 1030 IG+ISHVE +K R+PV++ V Sbjct: 1137 IGIISHVEELKNRVPVKLVV 1156 >UniRef50_B6WA22 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA22_9FIRM Length = 310 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 75/252 (29%), Positives = 132/252 (52%), Gaps = 26/252 (10%) Query: 805 ETLAQHQQHR-PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 E + +Q R +D L +E+ L K+ + + S+ EI ++K D + Sbjct: 67 ENIEYYQTDRIKEDIENLKKKIEKTNDFLFSIRLKIEKLSESKKEI-NKIKISLDKSKND 125 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRY 922 ++ ++A++ G L+ + G +E F F + ++ AN +L + G++ Sbjct: 126 DEILYKLAKVCD-----GSLSKVSG-REKINFETFVLSYYFNKILTYANLRLKDMSDGQF 179 Query: 923 LLQRKA-------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT 975 + RK + L++E++D + +R +LSGGE+F+ SLALAL LSD +S + Sbjct: 180 KMLRKKETSDKRKNNGLDIEILD-YNTGKIRSEASLSGGETFIASLALALGLSDEISGEN 238 Query: 976 ---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 +ID+LF+DEGFG+L + L+ A+ ++ L+ K IG+ISHV+ +K I +I+VK Sbjct: 239 GGIKIDTLFIDEGFGSLSDDYLEKAIRTIEKLSYDNKFIGLISHVKELKNAIDAKIEVK- 297 Query: 1033 INGLGYSKLEST 1044 YSK E + Sbjct: 298 -----YSKTEGS 304 >UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0WRN7_LACBU Length = 1045 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 95/148 (64%), Gaps = 13/148 (8%) Query: 904 LDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGE 955 L ++ +ANQ L +L GRY +Q + + LE++V D +R TLSGGE Sbjct: 894 LKEILKVANQHLKQLSSGRYAMQLHKEAGAYQKNTGLEIDVYDD-NVGQLRSVHTLSGGE 952 Query: 956 SFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 SF+ +L+LALAL +++ +++ ID+LF+DEGFG+LD E+L A+ AL+ + + + IG Sbjct: 953 SFIAALSLALALGEVIQNESGGISIDTLFVDEGFGSLDQESLSMAMAALENIESHNRMIG 1012 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSK 1040 +ISHV ++ERIP QI+V + G G S+ Sbjct: 1013 IISHVTMLQERIPYQIQV-QTEGQGKSR 1039 >UniRef50_UPI000190B7F1 exonuclease subunit SbcC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. 404ty RepID=UPI000190B7F1 Length = 94 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/88 (56%), Positives = 58/88 (65%) Query: 274 EKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHH 333 +K QPQLAAL+LAQPAR LRPHWERI E + A+ +RQ +EVN RLQS LR IR Sbjct: 7 KKTQPQLAALTLAQPARQLRPHWERIQEQTRAVERVRQHSDEVNARLQSAYRLRQRIRAC 66 Query: 334 AAKQSAELQQQQQSLNTWLQEHDRFRQW 361 A +Q +L Q L TWL EHD R W Sbjct: 67 AHRQFTQLNATGQRLKTWLAEHDGIRVW 94 >UniRef50_UPI000190C700 exonuclease subunit SbcC n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190C700 Length = 117 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/93 (58%), Positives = 62/93 (66%) Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 +AL +TL LT +A A A H QRPLR L AL GQI+P+QKR AQLQ AI QEQ Sbjct: 25 DALPPLTLDLTPQALAEARALHTRQRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQ 84 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEAR 489 TQ L + R YK K Q+LADV+TICEQEAR Sbjct: 85 TQYTQRLADKRLSYKTKAQELADVRTICEQEAR 117 >UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI Length = 1046 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 94/147 (63%), Gaps = 12/147 (8%) Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADAVR 946 F ++ LD+++ AN +L ++ GRY L RK + LE+ + D + R Sbjct: 885 FERYVLAAFLDDILREANGRLGKMTSGRYRLLRKTDRSKGNVQSGLELLIFDQYTGQE-R 943 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +TLSGGESF +L+LAL L+++V + ++++F+DEGFGTLD E+LD A++AL Sbjct: 944 HVKTLSGGESFKAALSLALGLAEVVQQYAGGVSLETMFIDEGFGTLDPESLDQAIEALID 1003 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKV 1030 + ++G+ +G+ISHV +KERI V+++V Sbjct: 1004 IQSTGRLVGIISHVPELKERIDVRLEV 1030 >UniRef50_C2FYC7 Possible ATPase involved in DNA repair n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FYC7_9SPHI Length = 576 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 6/188 (3%) Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 G + ++L++ D +++ L+ +++ + ++ L+++ +G F + + L Sbjct: 381 GALERELQRLEDEFEKKGKLLTAFEKLSHRKDNLRTLDNMF---KGSGFVNYVSSIHLQR 437 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L +ANQ+ RL + L +EA E EV+D R +TLSGG+ F SL LALA Sbjct: 438 LCDIANQRFHRL-TKNQLSLIINEANEFEVIDYLNNGYHRSVKTLSGGQGFQASLCLALA 496 Query: 967 LSDLVSHKTRIDS--LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L++ + + D F+DEGFGT D+E+++T + L LN + +G+ISHVE +KERI Sbjct: 497 LAENIQSLNKADKNFFFIDEGFGTQDAESMNTVFETLQYLNKENRIVGIISHVEELKERI 556 Query: 1025 PVQIKVKK 1032 P+ + V K Sbjct: 557 PMSVTVIK 564 >UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JT07_AGRVS Length = 1024 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 24/192 (12%) Query: 864 QTLMQQIAQMTQQVEDW----GYLNSLIG-----SKEGDKFRKFAQGLTLDNLVHLANQQ 914 Q L +++A + +++++ G L L G +++ K FA G + ++ AN + Sbjct: 821 QNLRKELAGIAKRLDEAEATSGPLRELAGLFDAQNRQKLKLETFAIGAMFEQVLQAANLR 880 Query: 915 LTRL-HGRYLLQR------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 L + +GRY L+R + L + D A R T TLSGGE+F+ +LALAL L Sbjct: 881 LGPMTNGRYRLERDIESGGRGKRGLGILAFDVHTGKA-RPTATLSGGETFIAALALALGL 939 Query: 968 SDLV---SHKTRIDSLFLDEGFGTLDSE----TLDTALDALDALNASGKTIGVISHVEAM 1020 +D+V S K R+D++FLDEGFG+LD+E TLD L AL++L + +T+G+ISHV + Sbjct: 940 ADVVESASGKVRLDTIFLDEGFGSLDTENGSGTLDLVLQALNSLASQNRTVGLISHVPLV 999 Query: 1021 KERIPVQIKVKK 1032 +E IP V+K Sbjct: 1000 QEAIPNGFYVRK 1011 >UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lactis RepID=SBCC_LACLA Length = 1046 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 12/145 (8%) Query: 908 VHLANQQLTRLHGRYLL-----QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLA 962 +H NQ L+ R+ L R+ L++ + D + A R TLSGGE+F+ +L+ Sbjct: 904 LHFINQ-LSNNRYRFELAGEGNNRRMDHGLDINIYDN-ETGAARSADTLSGGETFIAALS 961 Query: 963 LALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 +ALALS++V ++ +I++LF+DEGFG+LD ETL A+ AL+ + + +GVISHVE Sbjct: 962 IALALSEVVQNTANGVQIEALFIDEGFGSLDQETLQKAMQALEQI-GENRLVGVISHVEE 1020 Query: 1020 MKERIPVQIKVKKINGLGYSKLEST 1044 MK I +I + K+ G G S ++S Sbjct: 1021 MKATIGQRIIINKM-GDGRSNIKSV 1044 >UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHA7_NAKMY Length = 995 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 94/161 (58%), Gaps = 15/161 (9%) Query: 886 LIGSKE---GDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEV 934 L+G E G R + L + A +L R+ GRY R + L + Sbjct: 824 LLGRGENALGMTLRTYVLAHRLAQVAQAATDRLARMSAGRYSFVHRTDRESRGRAGGLGL 883 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT---RIDSLFLDEGFGTLDS 991 E++D W VR +TLSGGESFL SLALAL L+D+V+ + ++D+LF+DEGFG+LD Sbjct: 884 EIMDGWSG-LVRPAKTLSGGESFLASLALALGLADVVAAEAGGRQLDTLFIDEGFGSLDP 942 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 + LD + +D L A G+ +GV+SH++ ++ RIP QI+V + Sbjct: 943 DALDLVMATMDELRAGGRVVGVVSHLDELRLRIPRQIRVDR 983 >UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH6_FUSMR Length = 1016 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 7/187 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ L S K + I+F E NGLF I G TG+GK+T+LDA+ +LY + PR Sbjct: 1 MRPLLLEIEGLQSYKEKQVINF--EKLCENGLFGIFGETGSGKSTILDAMIFSLYGKIPR 58 Query: 61 ---LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 L S+S + + + + +F + + Y S+ A + G + E Sbjct: 59 TAELDQDSKSLKNFLNTSSKKMEVYFKFALDEDIYEV--SRKYALGKSKGEEVLKEKETI 116 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +G+I+AD +K ++ A GL FTR+++L QG+F+ F+ K ++ E+LE++ Sbjct: 117 LRKNGEIVADSIKKLEKIIAEDFGLSDDDFTRTVVLPQGKFSEFVKLKGADKREMLEKIF 176 Query: 178 GTEIYGQ 184 E YG+ Sbjct: 177 TMEKYGK 183 >UniRef50_C0Z547 Putative nuclease sbcCD subunit C n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z547_BREBN Length = 1216 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 10/226 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L+L ++S + ++DF E GLF I GPTG+GK+T+LDAI LALY + R Sbjct: 1 MRPIRLKLAGMHSYREMQEVDF--EVLCQAGLFGIFGPTGSGKSTILDAITLALYGQVVR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L + + +++ + FE+ G+ + + + GN + P V L + Sbjct: 59 LGGGNHPK-EVLNQLEQRVFVSFTFELGTGDERKQYTVEREFGLDKKGNKRQPEVRLIQS 117 Query: 120 ADGKILADKVKDKLELTAT-----LTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D V + +AT L GL FTR+++L QGQF+ FL K ER E+L+ Sbjct: 118 GALTGEPDVVLESKATSATAAIEALIGLTLQDFTRAVVLPQGQFSRFLTLKGSERNEMLQ 177 Query: 175 ELTGTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 + IYG+ +S V + + ++ +LQ ++ + PE ++ Sbjct: 178 RMFRLHIYGEKLSERVRHALEQVKEQMHRLQLASAALGDAGPEALE 223 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 4/172 (2%) Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASE 930 +M QQ ++ L L E F +F L ++ A+ L R+ RY L+ + Sbjct: 1041 EMLQQQDEQSRLEELKKLFEAKAFVQFIAEEKLVSIARDASYHLKRMTANRYGLE--IGD 1098 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS-DLVSHKTRIDSLFLDEGFGTL 989 E + D R TLSGGE+FL SL+LALALS ++ R++ FLDEGFGTL Sbjct: 1099 EGEFVLRDEGAGGMRRPVSTLSGGETFLTSLSLALALSMEIQMRGGRLEFFFLDEGFGTL 1158 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 D E L+ +DAL+ L TIGVISHV ++ R+P ++ V +G + Sbjct: 1159 DPELLEVVMDALERLRMDDFTIGVISHVPEIRVRMPRRLVVTPAEPMGKGSM 1210 >UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PSW5_9SPHI Length = 1012 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 106/188 (56%), Gaps = 6/188 (3%) Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 G + ++L++ D +++ L+ +++ + ++ L+++ +G F + + L Sbjct: 817 GALERELQRLEDEFEKKGKLLTAFEKLSHRKDNLRTLDNMF---KGSGFVNYVSSIHLQR 873 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L +ANQ+ RL + L +EA E EV+D R +TLSGG+ F SL LALA Sbjct: 874 LCDIANQRFHRL-TKNQLSLIINEANEFEVIDYLNNGYHRSVKTLSGGQGFQASLCLALA 932 Query: 967 LSDLVSHKTRIDS--LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L++ + + D F+DEGFGT D+E+++T + L LN + +G+ISHVE +KERI Sbjct: 933 LAENIQSLNKADKNFFFIDEGFGTQDAESMNTVFETLQYLNKENRIVGIISHVEELKERI 992 Query: 1025 PVQIKVKK 1032 P+ + V K Sbjct: 993 PMSVTVIK 1000 >UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CK38_9BACI Length = 1044 Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 111/189 (58%), Gaps = 21/189 (11%) Query: 862 QQQTLMQQIAQMTQQVEDW-------GYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLAN 912 + Q++ + + + +Q++D G+L+ + + + F ++ L++++ +AN Sbjct: 842 ENQSIHEYVCNLNKQMKDLEERYSIAGHLSEMARGQNAHRLTFERYVLASFLEDILLVAN 901 Query: 913 QQLTRL-HGRYLLQRK-------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 +L ++ GRY L RK LE+ V D + R +TLSGGESF +L+LA Sbjct: 902 DRLMKMTSGRYRLIRKRDRSKGNVQSGLELLVFDQYTGQE-RHVKTLSGGESFKAALSLA 960 Query: 965 LALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 L L+D+V + + ++F+DEGFGTLD E+LD A++AL + +SG+ +G+ISHV +K Sbjct: 961 LGLADVVQQYAGGVSLATMFIDEGFGTLDPESLDHAIEALMDIQSSGRLVGLISHVPELK 1020 Query: 1022 ERIPVQIKV 1030 ERI +++V Sbjct: 1021 ERIDARLEV 1029 >UniRef50_D1ADM4 SMC domain protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ADM4_THECD Length = 815 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 17/196 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+N S + +DF + F + GPTGAGK+T++DAIC ALY PR Sbjct: 1 MRPLRLYLENFGSFRAPTSVDFHDVDY-----FVLVGPTGAGKSTVIDAICFALYGTVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + L T+ +A V FEV Y S R + EL A Sbjct: 56 WGDEKKVGLALAPSATSGKVALV-FEVGDRRYGIVRSLVRNARGTVATREARLDELDPSA 114 Query: 121 DGK-----ILADKVKDKLE---LTA---TLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 D +LA V+ E +TA LTGL+Y FT+ ++L QG+FA FL+A P +R Sbjct: 115 DPAQDVTALLASPVRTLAEGDHVTAEVERLTGLEYKFFTQCVILPQGRFAEFLHATPSKR 174 Query: 170 AELLEELTGTEIYGQI 185 ELL +L ++ I Sbjct: 175 QELLVQLLDAGVFDAI 190 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 9/147 (6%) Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 + F + G L+ LV A+Q L L G++ L A +EV+D +A R+ RTL Sbjct: 659 NNFESWLCGEALEVLVSAASQTLKELSDGQFELVLDARNT--IEVIDYAEAGMRRNVRTL 716 Query: 952 SGGESFLVSLALALA----LSDLVSHKTR-IDSLFLDEGFGTLDSETLDTALDALDALNA 1006 SGGE+F SLALALA ++ L + R ++S+FLDEGFGTLD TLDT L+ L Sbjct: 717 SGGETFQASLALALALSEQVAGLSAGAARSLESIFLDEGFGTLDPATLDTVAATLERLAT 776 Query: 1007 SG-KTIGVISHVEAMKERIPVQIKVKK 1032 +G + +G+++HV A+ ER+PV+ V + Sbjct: 777 AGDRMVGIVTHVPALAERVPVRFAVSR 803 >UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R3_ABIDE Length = 1064 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 32/255 (12%) Query: 796 AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ 855 ++ +V + E A + +PD V ++Q+E + + T E+R + K Sbjct: 812 SENMVIKMKE--ATKDKVKPD--------VSELQKEFESVEEAYKNLHTELEEMRAEYKT 861 Query: 856 DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD------KFRKFAQGLTLDNLVH 909 D D ++ L +A+ E++G +N+L G+ F Q L+ ++ Sbjct: 862 DEDILKK---LDSALAERGAASEEYGIINNLYAKLSGNVSGARMDIETFVQRKYLEKILV 918 Query: 910 LANQQLTRLH-GRYLLQ----RKASEA----LEVEVVDTWQADAVRDTRTLSGGESFLVS 960 AN++ + G++ L+ KA E L++ V RD RTLSGGESF+ + Sbjct: 919 SANKRFANMSAGQFELRTYGLEKAGEGKNRGLDLMVYSALNG-KCRDVRTLSGGESFMAA 977 Query: 961 LALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 L+LAL ++D + S ++ +F+DEGFGTLD + + A+ L + K IG+ISHV Sbjct: 978 LSLALGMADRIQERSGAVNLEMMFVDEGFGTLDDNSRNQAVKILKNMAGGSKLIGIISHV 1037 Query: 1018 EAMKERIPVQIKVKK 1032 +K+ I Q+ V K Sbjct: 1038 SELKQEIEEQLIVTK 1052 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 3/38 (7%) Query: 20 IDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHE 57 IDFT+ + LF ITG TGAGKTT+ DAI AL+ E Sbjct: 20 IDFTK---SKQHLFLITGDTGAGKTTIFDAIVFALFGE 54 >UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS5_9SPHI Length = 1029 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 122/236 (51%), Gaps = 12/236 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + +IDF + + +F I G G+GKT+LL+AI ALY ET R Sbjct: 1 MIPIKLSIQGLYSYQDLQEIDF--QQLIGSSVFGIFGKVGSGKTSLLEAISFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGE--AYRAFWSQNRARNQPDGNLQVP----RV 114 L++ Q ++M + + + +F+ E Y+ + A+ P + ++ R+ Sbjct: 59 LNSRDNRQYNMMNLKSKHLIIDFQFQAGPEQQLYKFVYE---AKRHPKKHHEIGPGERRM 115 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + + + + ++ +D L+ + GLDY F R++++ Q QF FL P ER +++ Sbjct: 116 FIRQGDEWQPIGNEKEDIAVLSKQILGLDYDNFKRTIIIPQNQFREFLELSPTERTKMMN 175 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 +L + Y ++A V + K+ +L +L+ S + +TPE ++ + V+++ Sbjct: 176 QLFKLDQY-DLAARVSKLSKANDDQLAELRGLLSPLEAVTPETIEQAKTDITVISE 230 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteri... 981 0.0 UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepI... 581 e-164 UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx1... 579 e-163 UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQ... 573 e-161 UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID... 559 e-157 UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus as... 558 e-157 UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Gla... 546 e-153 UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 546 e-153 UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum ... 545 e-153 UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50... 544 e-153 UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepI... 544 e-153 UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivi... 542 e-152 UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transp... 542 e-152 UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacter... 540 e-151 UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enteroba... 535 e-150 UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales Rep... 529 e-148 UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=... 517 e-144 UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulf... 513 e-143 UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testo... 510 e-142 UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=... 503 e-140 UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Provide... 497 e-139 UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE 495 e-138 UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH 486 e-135 UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Provide... 484 e-135 UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunic... 478 e-133 UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungat... 475 e-132 UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinoge... 475 e-132 UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum R... 471 e-131 UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkal... 468 e-130 UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=C... 462 e-128 UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG... 455 e-126 UniRef50_A1SUG5 SMC domain protein n=1 Tax=Psychromonas ingraham... 445 e-123 UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepI... 435 e-120 UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilon... 434 e-120 UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 T... 434 e-120 UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychrofl... 434 e-120 UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovo... 433 e-119 UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobac... 432 e-119 UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 431 e-119 UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella am... 426 e-117 UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bactero... 424 e-117 UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumar... 423 e-116 UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bactero... 423 e-116 UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43F... 419 e-115 UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroid... 412 e-113 UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE 410 e-112 UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacte... 409 e-112 UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus V... 407 e-111 UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 404 e-111 UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48F... 404 e-111 UniRef50_Q1VUD1 ATPase involved in DNA repair n=2 Tax=Flavobacte... 404 e-110 UniRef50_Q73RB9 Nuclease SbcCD, C subunit, putative n=1 Tax=Trep... 403 e-110 UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xen... 403 e-110 UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epu... 403 e-110 UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ... 401 e-110 UniRef50_UPI0001AF53DF exonuclease SbcC n=1 Tax=Pseudomonas syri... 399 e-109 UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I... 399 e-109 UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=... 397 e-109 UniRef50_A4VHU3 Exonuclease SbcC n=2 Tax=Pseudomonas RepID=A4VHU... 397 e-109 UniRef50_C8PR35 SMC domain protein n=1 Tax=Treponema vincentii A... 397 e-109 UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostri... 396 e-108 UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22... 396 e-108 UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminoc... 395 e-108 UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea l... 392 e-107 UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostri... 392 e-107 UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteoba... 391 e-106 UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0H... 389 e-106 UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohomi... 386 e-105 UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 ... 386 e-105 UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthro... 385 e-105 UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus ... 384 e-105 UniRef50_D0L9F7 DNA repair exonuclease, SbcC n=1 Tax=Gordonia br... 384 e-104 UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME 383 e-104 UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothe... 382 e-104 UniRef50_C7N5A9 ATPase involved in DNA repair n=1 Tax=Slackia he... 381 e-104 UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytoferm... 380 e-103 UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ ... 380 e-103 UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bactero... 379 e-103 UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostri... 379 e-103 UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacteriu... 379 e-103 UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteoba... 378 e-103 UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillu... 378 e-103 UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostri... 376 e-102 UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema palli... 376 e-102 UniRef50_B9J003 Exonuclease n=78 Tax=Bacillus RepID=B9J003_BACCQ 376 e-102 UniRef50_UPI000196C4FF hypothetical protein CATMIT_02378 n=1 Tax... 375 e-102 UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=S... 375 e-102 UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipe... 374 e-102 UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 374 e-101 UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydroge... 374 e-101 UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 ... 372 e-101 UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri ... 371 e-101 UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. ... 370 e-100 UniRef50_A3TKY1 Putative exonuclease n=1 Tax=Janibacter sp. HTCC... 370 e-100 UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E... 370 e-100 UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinom... 370 e-100 UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. ... 370 e-100 UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacterac... 370 e-100 UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=... 369 e-100 UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetob... 369 e-100 UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina ba... 368 e-100 UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of ... 368 e-100 UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC ... 366 2e-99 UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus ... 366 2e-99 UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga... 366 2e-99 UniRef50_C3QPK2 ATP-dependent exonuclease sbcC n=9 Tax=Bacteroid... 365 4e-99 UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostri... 365 6e-99 UniRef50_C5D6P9 SMC domain protein n=3 Tax=Geobacillus RepID=C5D... 364 9e-99 UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococ... 364 1e-98 UniRef50_Q1WSF5 Exonuclease n=2 Tax=Lactobacillus salivarius Rep... 364 1e-98 UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolytic... 363 2e-98 UniRef50_Q9HWB8 Nuclease sbcCD subunit C n=6 Tax=Pseudomonas aer... 363 2e-98 UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae Rep... 362 3e-98 UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transp... 362 4e-98 UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteri... 362 5e-98 UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 361 9e-98 UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonada... 361 9e-98 UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostri... 360 1e-97 UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium ace... 360 1e-97 UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6L... 360 1e-97 UniRef50_A5ZTK9 Putative uncharacterized protein n=1 Tax=Ruminoc... 360 2e-97 UniRef50_B9DP77 Putative ATPase involved in DNA repair n=1 Tax=S... 360 2e-97 UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. ... 359 2e-97 UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus... 359 3e-97 UniRef50_D2LF16 Exonuclease protein n=1 Tax=Rhodomicrobium vanni... 359 3e-97 UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostri... 359 4e-97 UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24... 358 6e-97 UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotro... 358 6e-97 UniRef50_C6XKD1 SMC domain protein n=1 Tax=Hirschia baltica ATCC... 356 2e-96 UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0W... 355 4e-96 UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibact... 355 6e-96 UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. A... 354 8e-96 UniRef50_Q8EP67 Exonuclease n=1 Tax=Oceanobacillus iheyensis Rep... 354 1e-95 UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuoke... 353 2e-95 UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI 352 3e-95 UniRef50_C6VSY3 SMC domain protein n=1 Tax=Dyadobacter fermentan... 352 3e-95 UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus lu... 350 1e-94 UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI0... 350 2e-94 UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus ... 350 2e-94 UniRef50_UPI0001C34C0F ATPase involved in DNA repair n=1 Tax=Clo... 350 2e-94 UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease ... 349 3e-94 UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomo... 349 4e-94 UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_... 349 5e-94 UniRef50_B9EBU9 Putative uncharacterized protein n=1 Tax=Macroco... 349 5e-94 UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sp... 349 5e-94 UniRef50_A1ZW09 ATPase involved in DNA repair, putative n=1 Tax=... 349 5e-94 UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibir... 349 5e-94 UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum... 348 6e-94 UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi D... 348 8e-94 UniRef50_C9XND8 Exonuclease subunit C n=7 Tax=Clostridium diffic... 347 9e-94 UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus ... 347 2e-93 UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clos... 346 3e-93 UniRef50_O67124 Probable DNA double-strand break repair rad50 AT... 344 1e-92 UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9R... 343 2e-92 UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech7... 341 9e-92 UniRef50_B7GM49 ATPase involved in DNA repair, SbcC n=1 Tax=Anox... 341 9e-92 UniRef50_B6FJZ8 Putative uncharacterized protein n=1 Tax=Clostri... 340 1e-91 UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis ... 340 2e-91 UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales... 340 2e-91 UniRef50_A7Z370 YirY n=2 Tax=Bacillus subtilis group RepID=A7Z37... 339 5e-91 UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortifer... 338 6e-91 UniRef50_C7RGF7 SMC domain protein n=2 Tax=Anaerococcus RepID=C7... 338 6e-91 UniRef50_Q0S485 ATP-dependent dsDNA exonuclease SbcC n=4 Tax=Rho... 338 9e-91 UniRef50_B0A864 Putative uncharacterized protein n=1 Tax=Clostri... 337 1e-90 UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax... 337 1e-90 UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 337 2e-90 UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=... 337 2e-90 UniRef50_C7TAC3 DNA repair ATPase n=8 Tax=Lactobacillus RepID=C7... 336 3e-90 UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycet... 336 3e-90 UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 700... 335 4e-90 UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 1... 335 5e-90 UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella ch... 335 7e-90 UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8... 334 1e-89 UniRef50_C0EE11 Putative uncharacterized protein n=1 Tax=Clostri... 334 1e-89 UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesentero... 334 2e-89 UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=... 333 3e-89 UniRef50_D2SG48 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 332 3e-89 UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lac... 332 5e-89 UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 332 6e-89 UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella... 331 8e-89 UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobac... 331 1e-88 UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella cop... 329 3e-88 UniRef50_C0EV37 Putative uncharacterized protein n=1 Tax=Eubacte... 329 4e-88 UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybact... 329 4e-88 UniRef50_B8FW38 SMC domain protein n=2 Tax=Desulfitobacterium ha... 328 9e-88 UniRef50_B5HAZ2 SMC domain-containing protein n=1 Tax=Streptomyc... 327 1e-87 UniRef50_Q0SWG0 Exonuclease SbcC n=9 Tax=Clostridium perfringens... 327 2e-87 UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria R... 327 2e-87 UniRef50_A4ENU5 Exonuclease SbcC, putative n=1 Tax=Roseobacter s... 327 2e-87 UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=... 325 5e-87 UniRef50_C9L5R9 Putative exonuclease SbcC n=1 Tax=Blautia hansen... 323 2e-86 UniRef50_B2GF12 Exonuclease SbcC n=3 Tax=Lactobacillus fermentum... 323 3e-86 UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 T... 322 3e-86 UniRef50_C4L7Q2 SMC domain protein n=1 Tax=Tolumonas auensis DSM... 322 5e-86 UniRef50_C9BXS9 Exonuclease SbcC n=12 Tax=Enterococcus faecium R... 321 1e-85 UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aest... 320 1e-85 UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29... 320 2e-85 UniRef50_B0RFM2 Putative nuclease n=2 Tax=Clavibacter michiganen... 320 2e-85 UniRef50_A5VKB7 SMC domain protein n=8 Tax=Lactobacillus RepID=A... 319 3e-85 UniRef50_A5HZ17 Exonuclease n=10 Tax=Clostridium RepID=A5HZ17_CLOBH 319 6e-85 UniRef50_A7HCA0 DNA repair exonuclease, SbcC n=1 Tax=Anaeromyxob... 317 1e-84 UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alk... 317 2e-84 UniRef50_D0WRP2 Putative nuclease sbcCD subunit C n=1 Tax=Actino... 316 3e-84 UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms Re... 316 3e-84 UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynne... 315 6e-84 UniRef50_D2NSE4 ATPase involved in DNA repair n=2 Tax=Rothia muc... 314 1e-83 UniRef50_A9WFV4 SMC domain protein n=3 Tax=Chloroflexus RepID=A9... 314 1e-83 UniRef50_C0W8J1 Exonuclease n=1 Tax=Actinomyces urogenitalis DSM... 313 2e-83 UniRef50_A3HX95 Probable exonuclease n=1 Tax=Algoriphagus sp. PR... 312 4e-83 UniRef50_Q03P50 DNA repair ATPase n=1 Tax=Lactobacillus brevis A... 312 4e-83 UniRef50_C1XNQ1 ATPase involved in DNA repair n=1 Tax=Meiothermu... 312 6e-83 UniRef50_C8XKJ6 Exonuclease SbcC n=1 Tax=Nakamurella multipartit... 311 8e-83 UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB... 310 1e-82 UniRef50_C2BSE3 ATP-dependent dsDNA exonuclease SbcC n=1 Tax=Mob... 309 4e-82 UniRef50_C2KSA6 Exonuclease sbcc n=2 Tax=Mobiluncus mulieris Rep... 309 4e-82 UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZ... 309 4e-82 UniRef50_A7FLH1 Nuclease SbcCD, C subunit n=39 Tax=Enterobacteri... 304 1e-80 UniRef50_C5NXT7 Nuclease sbcCD subunit C n=1 Tax=Gemella haemoly... 303 2e-80 UniRef50_Q826W9 Putative ATP-dependent dsDNA exonuclease n=6 Tax... 303 3e-80 UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella deni... 301 8e-80 UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 301 1e-79 UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis ... 300 1e-79 UniRef50_C4FEI1 Putative uncharacterized protein n=1 Tax=Bifidob... 300 3e-79 UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis p... 299 3e-79 UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1... 298 5e-79 UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlan... 298 7e-79 UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium... 297 1e-78 UniRef50_C5CAA1 Exonuclease SbcC n=2 Tax=Micrococcus luteus NCTC... 297 1e-78 UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum ... 294 1e-77 UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=... 292 7e-77 UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccu... 290 1e-76 UniRef50_C1XTG5 ATPase involved in DNA repair n=1 Tax=Meiothermu... 290 2e-76 UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter ... 289 3e-76 UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 289 4e-76 UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales Re... 285 7e-75 UniRef50_B5Y7X7 Probable DNA double-strand break repair Rad50 AT... 284 1e-74 UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancou... 283 2e-74 UniRef50_UPI00016C3AE4 exonuclease SbcC n=1 Tax=Gemmata obscurig... 282 5e-74 UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Ps... 278 5e-73 UniRef50_Q1ZDG0 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 278 6e-73 UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfo... 278 7e-73 UniRef50_D1NTD8 Exonuclease SbcC n=1 Tax=Bifidobacterium gallicu... 278 1e-72 UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis... 277 2e-72 UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp.... 275 7e-72 UniRef50_B2S1H4 Exonuclease SbcC n=25 Tax=Borrelia RepID=B2S1H4_... 274 1e-71 UniRef50_Q67MD3 DNA repair exonuclease n=1 Tax=Symbiobacterium t... 272 8e-71 UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobact... 272 8e-71 UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP ... 268 1e-69 UniRef50_A3YE93 ATP-dependent dsDNA exonuclease n=1 Tax=Marinomo... 264 1e-68 UniRef50_B2HL37 Chromosome partition ATPase protein n=1 Tax=Myco... 262 5e-68 Sequences not found previously or not previously below threshold: >UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteriaceae RepID=SBCC_ECOLI Length = 1048 Score = 981 bits (2535), Expect = 0.0, Method: Composition-based stats. Identities = 1048/1048 (100%), Positives = 1048/1048 (100%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA Sbjct: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE Sbjct: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ Sbjct: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA Sbjct: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ Sbjct: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE Sbjct: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV Sbjct: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK Sbjct: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP Sbjct: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE Sbjct: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR Sbjct: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT Sbjct: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR Sbjct: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ Sbjct: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS Sbjct: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM Sbjct: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 KERIPVQIKVKKINGLGYSKLESTFAVK Sbjct: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 >UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepID=A8GAK3_SERP5 Length = 1083 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 516/1084 (47%), Positives = 655/1084 (60%), Gaps = 37/1084 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L NV+ SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA+N PDGNLQ P+VELA Sbjct: 61 L-NVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKV+DKL++TA +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 120 DGKILADKVRDKLDMTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQ+S VFEQHK AR +L+ L +ASG+ LL EQ Q L L L +E L + Sbjct: 180 IYGQLSERVFEQHKQARADLDALHQRASGIELLNDEQRQQLENQLIELGTQENTLGEQAR 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q+QQ+LNWL + + QQ+ Q+ L A E+ A+PQL L+ ++PA LRP Sbjct: 240 QQQQALNWLQQWQQTQQKQQEYQRQLNAAQQEQAAAEPQLQQLARSEPAEKLRPLLNERN 299 Query: 301 E---------------------HSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 A +A ++Q +E+ +LQ+ + + + + +Q Sbjct: 300 RCRNDQQALQQQISQLTQQQEQQLAQMAPLQQAVEQARAQLQAHVEHQQTQQRLIDEQVV 359 Query: 340 ELQQQQQSLNTWLQEHDRF-----RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 L Q L E + +Q+ + Q++ Q Q++L Sbjct: 360 PLDHQIAQLQKTQAELQQACDSAAQQYAQQKTALEQLEVQRSQLTAQAGQHQEKLNGLTA 419 Query: 395 KLNALAAITLTLTADE----VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 L A TL A + + AE RP+RQ L L +RL Q + Sbjct: 420 ALTAQQQQQNTLEAQSPLMVLRQRQTELAELRPVRQQLFTLSSLFSQVSERLEQQRREFA 479 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 + + L E RQ+YK++ ADV+ E E RI +LEA+RA+LQ G+PCPLCG Sbjct: 480 AHQTQLGEHEKQLEETRQQYKQQKNHQADVEKALELEQRIVSLEAERARLQTGEPCPLCG 539 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S SHPA+E YQA++P RL + + L +G LR + +++ +Q QR + Sbjct: 540 SCSHPAIEQYQAVKPSETALRLAQMRATTEALYTQGTELRTRCESLKEQQQRQQQLITQD 599 Query: 571 RQDEQALTQQWQAVTA--SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAH 628 Q QQWQ ++ + + TLQ D + WL+A D ERQ + +HE Sbjct: 600 EQQLATHLQQWQTLSTPLAFDFTLQDADRLSQWLNACDNEERQGQATLLQHEQASHAVQQ 659 Query: 629 NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ 688 + + Q +Q+ L + L + E R Q+ +R Q Sbjct: 660 AKDQLAALQTQQQQAHQEKARLDERYILLEKNHAEAQLQQQRLQQQWQDGERVLGEQRSQ 719 Query: 689 N----RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 QQ+T + E L E W++ EQ L Q LQQQ + Sbjct: 720 RLALFGEQQITQVREQLRARQTACEQASQQAAEQWQKAQEQRDRLSGQLAGLQQQLLQQT 779 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + LQ+A+ + AL AS F D+ AF AAL+D+ QL+Q K+ L+ ++ +A L+ Q Sbjct: 780 ERLQQAEQVWLQALAASEFSDETAFSAALLDDDQRRQLQQRKEQLQQRQVEASALLAQAV 839 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 ++L Q Q RP+ + + Q LA Q+L+ QGE+R QL+ D R QQ Sbjct: 840 DSLKQQLQQRPEGLDEHQTDPQALSQSLAALAQQLKTLQLRQGEVRNQLESDTARRINQQ 899 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 +L +QI+Q Q +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLL Sbjct: 900 SLFEQISQSQSQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLL 959 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 QRK S+ALE++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDE Sbjct: 960 QRKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE 1019 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLD+ETLDTALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE Sbjct: 1020 GFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQ 1079 Query: 1045 FAVK 1048 F ++ Sbjct: 1080 FRLE 1083 >UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RVT6_SEROD Length = 1084 Score = 579 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 511/1084 (47%), Positives = 653/1084 (60%), Gaps = 37/1084 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L NV+ SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA+N PDGNLQ P+VELA Sbjct: 61 L-NVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKV+DKL+LTA +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 120 DGKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQ+S VFEQHK A+ +L+ L +ASG+ LL EQ Q L + L L+ +E L + Sbjct: 180 IYGQLSERVFEQHKQAKADLDALHQRASGIELLNDEQRQQLESQLAELSAQETALSGQTR 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER-- 298 Q+QQ+LNWL + Q + Q+ L E+ A+PQL L+ ++PA LRP Sbjct: 240 QQQQALNWLQQWQRTQHQQQEYQRQLSVVQQEQAAAEPQLQQLARSEPAEKLRPLHNDRH 299 Query: 299 -------------------IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 A +A ++Q +E+ Q+ + + +Q Sbjct: 300 RCRSEQQALQQQIAQMAQQQEYQLAQMAPLQQAVEKARAEQQAQAERQQIQQRLIDEQIV 359 Query: 340 ELQQQQQSLNTWLQEHDRF-----RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 L Q L E + RQ + + Q++ Q Q++L Sbjct: 360 PLDHQIAQLQKTQTELQQACDNSARQCHQQTTDLEQLNVQRSQLTAQAGQHQEKLNGLNA 419 Query: 395 KLNALAAITLTLTADE----VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 L A L + AE RP RQ L L +RL Q + Sbjct: 420 ALMAQQQQQNALETQSPLAALRRRQTALAELRPARQQLFTLSSLFRQTSERLEQQRKEFT 479 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 + + L E R+ YK++ DV+ E E RI +LEA+RA LQ+G+PCPLCG Sbjct: 480 ARQAQLGEHEQQLEETRRHYKQQKAHQLDVEKALELEKRIVSLEAERALLQSGEPCPLCG 539 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S SHPA+E YQA++P RL + + + L +G LR + +++ +Q QR + + + Sbjct: 540 SASHPAIEQYQAVKPSETALRLTEMRVKTEALYTQGTELRTRCESLKEQQQRQQQQIEQD 599 Query: 571 RQDEQALTQQWQAVTA--SLNITLQPLDDIQPWLDAQDEHERQLRL-LSQRHELQGQIAA 627 Q + QQWQ ++A + + LQ + + WL+A D ERQ + L+Q + + Sbjct: 600 EQQLASQRQQWQTLSAPLAFDFDLQDAERLSQWLNACDNEERQGQQGLAQHEQAAQAVQQ 659 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 + + Q Q +Q QQ + L + + QQ+ Q ++ +E A Sbjct: 660 AKDALAELQAQQQQAQQQQALLDERFTLLEKNHADAQLQQQRLQQQWQEGEKTLSEHRAQ 719 Query: 688 QNRI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + + Q + + E L E W++ EQ L Q LQQQ + Sbjct: 720 RLALFGEQHIPQVREQLRAQLATCEQASHQAAEQWQKAQEQRDRLAGQLAGLQQQQQRQS 779 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + LQ+A+ + AL AS F D+ AF AAL+D+ QL+Q K+ L ++ +A L+ Q Sbjct: 780 ERLQQAEQTWLEALAASEFSDEAAFSAALLDDAQRRQLQQHKERLHKRQVEASALLAQAV 839 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 TL Q +Q RP+ + Q L Q+L+ QGE+R QL+ DA R QQ Sbjct: 840 HTLEQQRQQRPEGLDETQADAPALSQSLEALAQQLKTLQLRQGEVRNQLESDAARRLNQQ 899 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 +L +QI+Q QQ +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLL Sbjct: 900 SLFEQISQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLL 959 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 QRK S+ALE++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDE Sbjct: 960 QRKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE 1019 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLD+ETLDTALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE Sbjct: 1020 GFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQ 1079 Query: 1045 FAVK 1048 F ++ Sbjct: 1080 FRLE 1083 >UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQH1_ACIAC Length = 1164 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 423/1167 (36%), Positives = 574/1167 (49%), Gaps = 127/1167 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT PF+ GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILALRLKNLNSLKGEWRIDFTAPPFSEGGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + VSQ N+LMTR TA+CLAEVEFEV+G YRAFWSQ RAR++PDG LQ P+VELA+ Sbjct: 61 IGGVSQGGNELMTRHTADCLAEVEFEVRGSRYRAFWSQRRARDKPDGALQAPQVELAQVL 120 Query: 121 DG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + L KV++KL+ LTGLD+GRFT+SMLL+QG FAAFL A +RAELLEEL Sbjct: 121 SDDGAARPLTRKVQEKLQQVEALTGLDFGRFTKSMLLAQGGFAAFLEAPAGKRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGT+IYG+IS V E + ART LE +A+A GV LL + L VL ++ + L Sbjct: 181 TGTDIYGKISQRVHECAREARTALESARARAGGVALLDTAERDRLVQEAAVLDEQMQVLR 240 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH- 295 + +WL + ++ + + ++ A A + L A+PA L P Sbjct: 241 ERSAATRGERDWLVAVERARERVAEADRQVRDADAAWAARDADVQRLLRAEPAMRLDPLH 300 Query: 296 -------------WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 R+ E A R + R ++ +++RH + + Sbjct: 301 GAWLAAVQDERTVASRLQETGAQAQQARARHAAALRRTEALARQVSALRHAEWQAGRDAL 360 Query: 343 QQQQSLNTWLQEHDRFRQW-------NNEPAGWRAQFSQQTSDREHLR------------ 383 ++ H AG + + ++RE L Sbjct: 361 AGLEAEGIDDPRHAALAARLGEWSARFQALAGLQEDIHRLEAEREGLAIRRAQEQQRQQA 420 Query: 384 ------QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 Q L A + L L A T Q + H A ++ Sbjct: 421 ATGACLQAGTSLAGAREALEHAEGEYLRQLAGHDETHWQQEILRLVEEGHAWADARDLLT 480 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNE----MRQRYKEKTQQLADVKTICEQEARIKTL 493 + + L+ + ++ R A L + R++E Q L D + + QE RI++L Sbjct: 481 RSEALSARRSRRATARADRQNRVATLEAALRGLEGRHQELRQGLRDQERLLAQEQRIQSL 540 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 E+ R QL+ G+ CPLCGS HPAV AY+AL+ Q+RL ++ L E +L Sbjct: 541 ESHRRQLRPGEACPLCGSQEHPAVGAYEALDVSATQARLDDARRALEALDHERRARETEL 600 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 A+ Q +R + + + QW+A+ A L D + Sbjct: 601 AALRAQEERAAEDEAEDGRAQADGQSQWEALCAVLAWPAGQPDGAALEAAQHRHAASLEQ 660 Query: 614 LLSQRHELQG--------------------------------------QIAAHNQQIIQY 635 +Q L G ++ A ++ + + Sbjct: 661 ARAQVAALGGARDRAEAARRAVQQAEREAAAAGQALALADKDVQVAGRELQALDEALERQ 720 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI---- 691 ++ +Q L L LP+ E E WL R ++ Q+W+ LQ ++ Sbjct: 721 TAALQSVRQTLARDLAEQGYALPR--EPEPWLRERGRDVQAWEAACRRRQDLQAQMPLLH 778 Query: 692 ----------QQLTPILETLPQSDELPHCEE---------------------TVVLENWR 720 +Q T L LP P E ++ R Sbjct: 779 EVAENAASVARQWTERLAALPAPATRPDDGEAEDSAIDAGTVRDVARLEGWLQQAAQSVR 838 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 + +L + LQ+ AA ++ +++A+ AS F D QAFL A M+ Sbjct: 839 SCEDTLASLGGTGRELQRAQADAAGQARQRATAWESAVAASPFADAQAFLDARMEPAERK 898 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 L++ AQ L + + L + ++ + ELA + Sbjct: 899 ALQEAVDRTRQAWTAAQALHGEAGQALERLLA-----SAQSQRGLQDVDGELAAWESQGL 953 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 QG I QL++D R+ Q L+ +IA + E W +LN LIGS +G ++RKFAQ Sbjct: 954 AAAQRQGAIAGQLREDGLRREGLQALLAEIAAQEAEAESWQHLNGLIGSADGARYRKFAQ 1013 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 GLTLD+LVHLAN +L RLHGRYLL R+ LE+EVVDTWQAD RDTRTLSGGESFL S Sbjct: 1014 GLTLDHLVHLANLRLQRLHGRYLLARRTGGDLELEVVDTWQADVARDTRTLSGGESFLAS 1073 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALALALSDLVSHKTRIDSLFLDEGFGTLD +TL+ ALDALD+L + GKTIG+ISHVEA+ Sbjct: 1074 LALALALSDLVSHKTRIDSLFLDEGFGTLDGDTLEVALDALDSLQSGGKTIGIISHVEAV 1133 Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAV 1047 KERIPVQI+V+K GLGYS LE FAV Sbjct: 1134 KERIPVQIRVRKGVGLGYSALERRFAV 1160 >UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID=C8Q3M6_9ENTR Length = 1179 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 527/1179 (44%), Positives = 672/1179 (56%), Gaps = 139/1179 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR KNLN+L+GEW IDF REPFASNGLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +SQSQN+L+TRDTAECLAEVEFE+KGEA+RAFWSQNRAR Q DG LQ PRVELARCA Sbjct: 61 LGVLSQSQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARCA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D +I+ADKV DKL+L TL+GLD+ RFTRSM+LSQGQFAAFLNAKP ERAELLEELTGTE Sbjct: 121 DNQIVADKVGDKLKLIETLSGLDFARFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS +FE++K+AR EL+ L+A+A G++LL +LT+ L+ L E L Sbjct: 181 IYGQISMQIFERYKNARAELDTLRARAGGMSLLDEAHRTALTSQLEQLNAAETTLNQQLT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QQ WL++ +L +E + QQALQ A ++A P+ L+ A+PA LR ++ Sbjct: 241 TAQQQQQWLSQSHQLAEEQQQAQQALQAAENAWQQADPERQRLARAEPAEKLRAKLQQRT 300 Query: 301 EHSAA----------------------------------------------LAHIRQQIE 314 + + +Q+ Sbjct: 301 QLQQENIALTQQYQQVQAQQQQAIAAQQQGETRYQAAQQAREQAQHAQQQLETLLTEQVI 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ +L + + + Q +QQ + +LN QE +R +Q +E WR++ + Sbjct: 361 PLDQQLTALQHQLSDQQREVTAQQQVVQQSRTALNQQQQESERLQQLWDEQQQWRSREAS 420 Query: 375 QTSDREHLRQWQQQLTHAEQKLNALA------------------------------AITL 404 S EHL +WQ +T +++ +A A Sbjct: 421 VASWGEHLTRWQSDITRLDEREQTVAQLRHQQQQQQQQLDQLQHALTARQQAAQPLAEQE 480 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 T +V ALAQH QR RQ L L Q Q + Q Q + +TQ+ L Sbjct: 481 TRDISQVREALAQHQAQRASRQQLTLLAAQWHALQPQQQQRQQKLHALTQQYQAEEQVLQ 540 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 +R+ +K + Q + DV+TIC+QE I L +RA+LQ PCPLCGS HPA+E Y+ LE Sbjct: 541 ALREEWKRENQAMLDVQTICDQERTIAQLADERARLQPNHPCPLCGSCQHPAIEQYRQLE 600 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 PG NQ RL AL+ V +L E G Q Q Q + E + + Q LT+QWQ + Sbjct: 601 PGENQQRLAALQTRVAQLKESGTAKGEQQRLSLLQQQALQQELKDIGQQLTTLTEQWQQL 660 Query: 585 TASLNITL--QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 T L +T + DD+ W QD+ E QL+ + + Q + Q + QR Sbjct: 661 TGELALTFAVEQQDDVIRWQQQQDQQENQLQAWLEHLQQQQLAQQQISSVQQALDDLRQR 720 Query: 643 QQLLLTT-----------LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + L + LTLP + ESWL T Q Q WQ+ + LT LQ ++ Sbjct: 721 SETEYAAWQQLSQQLAQQLAQHQLTLPAREARESWLNTLQLRWQKWQESERLLTNLQPQL 780 Query: 692 ------------------QQLTPILETLP----QSDELPHCEETVVLENWRQVHEQ---- 725 Q+L + +TL Q+ E + + + Q Q Sbjct: 781 AKADSERHNQQQNLAREQQRLDALQQTLSALQLQNAEQHQRRQQLFGDRQVQAERQAHQA 840 Query: 726 ----------------------CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 +L Q+ L+QQ + A L+ A+ +ALQ S F Sbjct: 841 ALQAGEQELAQQLQAWQQAQSAVHSLSGQRAQLEQQQLTQAARLEAAETDLRSALQHSDF 900 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D+ A AAL+D + QL Q Q LE QR+Q L Q + L+ HQQ RP Sbjct: 901 ADEAALRAALLDVAEVDQLRQRLQALEQQRQQQTALSQQLVQRLSAHQQQRPAALSDELA 960 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 I L LR+N QGE +QQL DA R+QQQ+L+ QI+ ++ W L Sbjct: 961 A--DIGTRLENLRMALRDNARQQGEAQQQLSSDARLREQQQSLLTQISSHEAELTQWSQL 1018 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 N LIGS +GDKFR+FAQGLTLD+LV LAN+QL RLHGRYLLQR+A++ LE++VVDTWQAD Sbjct: 1019 NELIGSAKGDKFRRFAQGLTLDHLVWLANRQLDRLHGRYLLQRRATDELELDVVDTWQAD 1078 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 A RDTRTLSGGESFLVSLALALALSDLVSHKTR++SLFLDEGFGTLD+ETLDTALDALDA Sbjct: 1079 ATRDTRTLSGGESFLVSLALALALSDLVSHKTRLESLFLDEGFGTLDAETLDTALDALDA 1138 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 LNASGKTIGVISHVEAMKERIPVQIKV+K+NGLGYSKLE Sbjct: 1139 LNASGKTIGVISHVEAMKERIPVQIKVRKMNGLGYSKLE 1177 >UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK95_PHOAA Length = 1229 Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 490/1227 (39%), Positives = 651/1227 (53%), Gaps = 183/1227 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQPDGNLQ P+VELA Sbjct: 61 LMTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPDGNLQTPKVELAYKE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GKILADK++DK E +TGLDYGRFT+SMLLSQG FAAFLNAK ERA+LLEELTGTE Sbjct: 121 NGKILADKIQDKEEKVTEITGLDYGRFTKSMLLSQGDFAAFLNAKANERADLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S ++ QHK A++ELE LQ +AS + LLT EQ Q Q L + E QL + Sbjct: 181 IYGVLSQQIYLQHKEAQSELEILQVKASAIDLLTKEQHQQYLEQQQQLANCELQLNQQIK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +Q S WLTR++ELQ+ + +LQQA A+PQL L+ ++PA LRP + Sbjct: 241 TQQYSEQWLTREEELQKFLTENNASLQQAEKALTHAEPQLQKLANSEPAEALRPLLDDKN 300 Query: 301 EHSAALAHIRQQIE---------------------------------------------- 314 + I +Q+E Sbjct: 301 RTQSEHQKISKQLEDMRQQLQQQQQILTPIQQKVTNADSVREAHQQHRQQQETLISEQVI 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ ++ + + H +Q AE + Q N Q + + Q Sbjct: 361 PLDHQIDIQIKDLNLTQQHINEQKAEFETANQQYNAANQHSLSLTSQRKQLENYFEQQPH 420 Query: 375 QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA-------------DEVATALAQHAEQ 421 E + WQ Q + +++ + T + Q Sbjct: 421 HQYFGEKMTFWQHQFSWLQEQQQHINQWTQKADKLTTELTQFNDSLNKQQKDLKQQIENS 480 Query: 422 RPLRQHLVALHGQIVPQQKR------------------------------------LAQL 445 +PL+ Q+ QK+ +A Sbjct: 481 QPLKLAFEQAEQQLFNLQKQYSQEKLKKQFIEYQQKLTLQHKLEVLSPQILQLQATIANN 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + +Q + + + + ++ EK Q L D+ + E +I +LE +RAQL+ G P Sbjct: 541 NLRLQQPEKLLKELPIQIEAVNKQLSEKQQHLEDLSQRIQLEQKIVSLEKERAQLKEGDP 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGS HPA++AYQ +E ++ RL L + ++L +L + + +Q Sbjct: 601 CPLCGSEHHPAIQAYQHIELPKSEQRLKDLRQQSEQLQTTKISLVNKKEFQQQQYNHILQ 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLD----------------------------- 596 E +L QQWQ + L I + PLD Sbjct: 661 EIADAEPQLNSLAQQWQQICEILQIEISPLDKPALEAFVQQNQSAYQLSQTQLTEFELAE 720 Query: 597 -DIQPWLDAQDEHERQLRLLSQRHEL-QGQIAAHNQQIIQYQQQIEQRQ-------QLLL 647 + Q H+ ++ + +R EL + Q A + + + Q +I+Q+Q + + Sbjct: 721 KEYQKTEKTLTVHKEHIKEIERRVELDKQQYDARKKYLSELQPEIQQQQCKLTDVIEKIR 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQ-------SWQQRQNELTALQNRIQQLTPILET 700 + L Y L LP ++ E+WL R+ E + +WQQ Q E +QN+ + L E Sbjct: 781 SELQEYDLLLPMLNDAENWLQQRKHEWKIYQNCRENWQQLQKEQAVVQNQTESLNKQKEE 840 Query: 701 -----------------------------------------LPQSDELPHCEETVVLENW 719 L Q + E L + Sbjct: 841 YASRLNILHQKEQQQKQQLEKAQQQRQALFGEQSVAKITQALQQHSQKLEEEYQQALSHL 900 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 +Q L ++ A Q A+ F++ L+ S+F +Q F AAL+ + Sbjct: 901 QQAQSHINQLTGAIYETEKNRSQAEYQRQLAEQNFNSVLEKSIFANQSIFEAALLPPEQR 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 +L QLK+ LE Q+ QA+TL + AETL QH ++RP T Q+ ++L + ++L Sbjct: 961 KELRQLKEQLEQQQVQAKTLCQKAAETLQQHMKNRPKLLDQYTKP--QLIEQLKNSTEEL 1018 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 ++NT QGE+R L DA RQQQ++L+++I Q +DW YLN+LIGS +G KFR+FA Sbjct: 1019 KKNTLQQGELRNLLSNDATRRQQQKSLLEEIDHCRQNYDDWSYLNNLIGSADGAKFRRFA 1078 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LVHLANQ+L +LHGRY LQRK + LE++V+DTWQADA+RDT+TLSGGESFLV Sbjct: 1079 QGLTLDHLVHLANQRLEKLHGRYYLQRKNCDGLELQVIDTWQADAIRDTKTLSGGESFLV 1138 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALALALSDLVS+KT I+SLFLDEGFGTLD ETLD ALDALD+LNASGKTIGVISHVEA Sbjct: 1139 SLALALALSDLVSNKTCINSLFLDEGFGTLDPETLDIALDALDSLNASGKTIGVISHVEA 1198 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFA 1046 MKERIPVQIKVKKINGLG SKL F Sbjct: 1199 MKERIPVQIKVKKINGLGISKLAPEFR 1225 >UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5B9 Length = 1191 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 353/1189 (29%), Positives = 558/1189 (46%), Gaps = 144/1189 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L+NLNS++ +WKIDFT + FA NGLFAITGPTGAGKTT+LDAICLALYH TPR Sbjct: 1 MKILSVLLENLNSIEQKWKIDFTADEFADNGLFAITGPTGAGKTTILDAICLALYHTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +Q+ +M R+ C AEVEF V + Y A WS +RAR + DG +Q + L Sbjct: 61 TGSGTQNGEMVMNRNAGFCSAEVEFSVNDKVYLATWSVSRARKKTDGKIQPAKASLTNLT 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D +A ++ DKL+ LT L++ +FT+SMLLSQG FAAFL+AK ER++LL+++TGTE Sbjct: 121 DNIEMATQIGDKLKQVIHLTKLEFSQFTKSMLLSQGAFAAFLDAKDNERSDLLQQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS FE+ K + L++L + S +L+ ++ S+ S L + QL T Sbjct: 181 IYTEISKRAFEEAKQLESLLKQLHMKHSAQPVLSDDEEASIAESANELLIQTTQLQTQIN 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +WLT+ D L Q + + A + A++ E+ + LA L L A++ P + ++ Sbjct: 241 NLVEHRDWLTQLDVLTQHVTGAKAAHEHAVSALEQEKTNLAMLELGLLAQSFAPLYAKMQ 300 Query: 301 EHSAALAHIRQQIEEVNTRL-------------------------QSTMALRASIRHHAA 335 + ++ ++ ++ ++ T+L ++ AL+ I Sbjct: 301 DLEIRVSTLQDELSQLKTQLPDLAQTLDDANTALKTAQDALNTQTKAHNALQQLINEQIT 360 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAG---------------------------- 367 +E+ Q + LN Q+ D+ + +E G Sbjct: 361 PLDSEINQTTKQLNITQQDIDKHTKLRDEAQGKITLTTPLIDQAQTQLTQAQEYLEQHQA 420 Query: 368 ----------WRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 W + Q + Q ++ + + L +T + Sbjct: 421 DAHLVQYLSGWHSDVKQIQQAYATVHSVQARMLAQQSNTDTLDDVTAQIAIITTELNTHA 480 Query: 418 HAEQRPLRQHLVA------------------LHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 +A+ ++Q++ A + ++ ++ + Q I +TQ Sbjct: 481 NAQLTEVKQYMAAGDDRLRDAATQQLQARQIIEATLLGFAQQYNETQGQISTLTQSTDTL 540 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRA----QLQAGQPCPLCGSTSHP 515 A L TQ+ + + E + L+AQ A QL + CPLC + Sbjct: 541 TADLAAQNAALITLTQERDRDQALYENTKLAQGLQAQLAELSQQLHHKETCPLCAGSEFG 600 Query: 516 AVEAYQALEPGVNQS-----RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 E+Y A + +N ++ ++ ++ + + + I L + L Sbjct: 601 DYESYHAHQTQLNDDGAFSQKIAEYLHQFEQSEQAVTKKQQAIAKIEAHLASALAQIDQL 660 Query: 571 RQDEQALTQQWQAVTASLNITLQPLDD--IQPWLDAQDEHE---RQLRLLSQRHELQGQI 625 + ++W T L++TL D I +L ++ QL L+ R L ++ Sbjct: 661 QLTLTTNQERWDTATKQLSVTLSITDHEAIMRYLQECEDFRDGITQLSTLNSRAALFNEL 720 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT 685 + Q+ Q + ++ SWLA +Q +A +WQ +++ T Sbjct: 721 TTAQSTWNDAKAQLSQAIVIAGYAAAPEIDIEYEDSLFLSWLAQKQADATAWQDQKSAFT 780 Query: 686 ----------------------------ALQNRIQQLTPILETLPQ------SDELPHCE 711 +L ++ QL L++ Q +D++PH E Sbjct: 781 TQEKALTRLHADIQIQTNQKVTSDEALESLYDQQTQLNITLQSAKQKRFALFADKIPHTE 840 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA--------------QFDTA 757 Q L +QQQ Q +++ F+ A Sbjct: 841 LATAQAALTAAQTQVGTLSTQQQLAHTQHETTLSKIEQLTTTLAKERVNHTNAINAFNDA 900 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L AS F D AF AAL+ ++ + L LKQ L + ++L TL H + P Sbjct: 901 LNASTFADVDAFTAALLTDEQVQSLNILKQELNDAIVSTRSLFVSQQATLETHISY-PLA 959 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + T E++ +++ +L+ + ++ +L+++ +QQQ + QI + +++ Sbjct: 960 NMYQQTTKEEVIEQIVPLESQLKTLNDDRAKLAGKLEENERFKQQQAQVQGQIDWLNEKL 1019 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVV 937 YL+ LIGS +G +FR FAQGLTLD+L+ LAN +T RY LQRK E+LE+ VV Sbjct: 1020 TLANYLSGLIGSADGKRFRNFAQGLTLDHLITLANHHMTAFDNRYALQRKDDESLELLVV 1079 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTA 997 D WQAD +RDT+TLSGGE+FLVSLALAL LSDLVS + IDSLFLDEGFGTLD TLD A Sbjct: 1080 DQWQADNLRDTKTLSGGETFLVSLALALGLSDLVSKRISIDSLFLDEGFGTLDENTLDLA 1139 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 ++AL+ L + GK IGVISHV+ M+ERI +Q+KV K G G S L+ + Sbjct: 1140 MNALEQLQSQGKMIGVISHVKEMQERIHLQVKVSKSAGTGTSSLDPKYR 1188 >UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Moritella sp. PE36 RepID=A6FAU1_9GAMM Length = 1223 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 453/1224 (37%), Positives = 602/1224 (49%), Gaps = 190/1224 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L KN+NSLKGEW+++F +EPF SNGLFAITGPTGAGKTT+LDAICLALYHETPR Sbjct: 1 MKIKRLSFKNINSLKGEWQLNFDQEPFLSNGLFAITGPTGAGKTTILDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+SQN++MTR+TAEC AEVEFEV+G+ YRA WSQ RA+N P GNLQ +VELA Sbjct: 61 LV-ISKSQNEVMTRNTAECAAEVEFEVQGKGYRASWSQRRAKNSPQGNLQEMKVELAEVV 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA +VK K +L A +TGLD+ RF +SMLLSQG+FAAFLNA +RAELLEELTGTE Sbjct: 120 SGNILASQVKLKKQLVAEITGLDFSRFRKSMLLSQGEFAAFLNAPANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFE H A+ EL+KL+A+A GV LLT EQ + L Q Sbjct: 180 IYGQISQAVFESHNLAKAELDKLRAKADGVNLLTDEQRAEIVGEQTGGETLVTDLTQQQT 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQAL----------QQALAEEEKAQP------------ 278 QQ W + ++ Q + Q +L Q AL E+A+P Sbjct: 240 SLQQQKQWREQLEKAQVGVTEAQTSLVNTEQETTAQQPALDRLEQAEPAEALRLPFTHLS 299 Query: 279 ----QLAALSLAQPAR----------------NLRPHWERI----AEHSAALAHIRQQIE 314 +LA L Q A LR ++ + A I +QI Sbjct: 300 QADTKLAELEQKQQALQTSVVSAQTAVADNQLKLRSSQAQLDACKQQSQAQEILINEQIM 359 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL-----------------NTWLQEHDR 357 ++ + + +Q++ELQ QQ+L T+ Q+H + Sbjct: 360 PLDNECAQLSKEQLQCQSQQQQQNSELQTTQQNLAALTQTAETAKTTVNACQTYQQQHAQ 419 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD-------- 409 Q + W++Q Q + ++ QQQ+ +Q L L + Sbjct: 420 DAQLSTRLPLWQSQIQQCNQQQANVATLQQQVITNQQSLQQSLTAQQQLANNVTANVERE 479 Query: 410 ------------------------EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQL 445 ++ A +Q + + + + L L + + + + Sbjct: 480 SAVKNAVNQAQQQVSDLLVGDDLPDLEQAFSQQSRLQGIVEQLSGLQQRYLTESQEFEAN 539 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 Q ++ + Q++ N + R+ +K K +L DV+ + EQE +I +LE R+QL+ GQ Sbjct: 540 QASMVALEQQRAGINVEITAKRELFKTKKNELNDVQRLLEQEQKIASLEQLRSQLEPGQA 599 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 C LCGST HP +E YQ + + R LE +K++ +G L+ +L +L+ + Sbjct: 600 CQLCGSTEHPLIEEYQHIADSLTVQRKTQLELNLKQIETDGGELKNRLVEANTKLEHFNH 659 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLD----------------------------- 596 +L+Q + QWQ LN L D Sbjct: 660 RNATLQQQLDSFVAQWQTYNEQLNANLMITDSANTQVFVQQQGVQLAQLSQRIQALKAAN 719 Query: 597 -DIQPWLDAQDEHERQLRLLSQRHEL--------QGQIAAHNQQIIQYQQQIEQRQQLLL 647 +Q A E ++ L + EL Q Q Q Q + + QQ L+ Sbjct: 720 MQLQSAQQALTEFDKNSAQLQHQIELVNRDVKATQDAEQKLTQDAQQQGQVLTELQQTLI 779 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI----QQLTPILETL-- 701 +T LTLP+ ++WL T QQ Q W Q+ L A ++ QLTP+ E L Sbjct: 780 NNVTELGLTLPEWSLLDNWLVTCQQALQKWDQQSQLLQAANEQLLLAESQLTPLREQLVK 839 Query: 702 ---------------------PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 Q + V + + + +Q Q QD Sbjct: 840 LELAIAQTLETLSNLSDNLTAKQQQRQQLFGQRSVADARQTMQQQLTTAEQAHQACSTQD 899 Query: 741 VLAAQSLQKAQ---------------------AQFDTALQASVFDDQQAFLAALMDEQTL 779 + L Q A + AL AS F F AL+ + Sbjct: 900 HALSNQLHAQQGELTTLQQGLVQQQQESSDCLATWQHALDASPFATDVEFNQALLPAEEK 959 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 +L LK L + Q L Q E L QQ + + +T + +L + +L Sbjct: 960 QRLVVLKSQLTANLTRCQALFEQARERLLTLQQTQLTELDIVT-----LVTQLDEITTRL 1014 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 + QGE++Q+L D QQI +D YL SLIGSK+G KFR+FA Sbjct: 1015 NQGLQRQGELKQRLADDTTRSADLADFYQQIKACEADYDDKAYLQSLIGSKDGSKFRRFA 1074 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRK---ASEALEVEVVDTWQADAVRDTRTLSGGES 956 QGLTLD+LV LANQQL RLH RY LQRK SEAL ++VVDTW ADAVRDT+TLSGGES Sbjct: 1075 QGLTLDHLVTLANQQLNRLHSRYQLQRKLASGSEALALQVVDTWLADAVRDTKTLSGGES 1134 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSLALAL LSDLVSHKT IDSLFLDEGFGTLD+ETLD ALDALD LNASGK IGVISH Sbjct: 1135 FLVSLALALGLSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDNLNASGKMIGVISH 1194 Query: 1017 VEAMKERIPVQIKVKKINGLGYSK 1040 VEA+KERIPVQ++V K +GLG S Sbjct: 1195 VEALKERIPVQVRVNKGSGLGLSS 1218 >UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3W6_9NEIS Length = 1140 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 443/1145 (38%), Positives = 609/1145 (53%), Gaps = 111/1145 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEWKIDFT+ PF +NGLFAITGPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTQPPFKNNGLFAITGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++M+R TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELA A Sbjct: 61 LKTISASSNEIMSRHTADCLAEVEFEVKGQVYRAFWSQRRARDKADGALQAPKVELADGA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G IL ++ DKL+ +TGLD+ RFT+SM+L+QG FAAFLNA ERAELLEELTGT+ Sbjct: 121 -GNILTSQINDKLKRIEAITGLDFARFTKSMMLAQGGFAAFLNASANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFEQ + A+ L++L+A+A GV LL E+ Q++ + LT + L Q+ Sbjct: 180 IYGQISQRVFEQARDAKQALDQLRAKADGVELLPEERRQAMQEQIGELTQQLTALHAEQE 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q + W + + + Q A Q A +A+P+L L + PA +RP + Sbjct: 240 QTRALRQWRYEVGQAELAEEQAQSAAQAAQDALRQAEPELQRLQRSDPAEAVRPVYLAWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRAS-----------IRHHAAKQSAELQQQQQSLN 349 + A R +E V +L ++ S + ++ +Q + Q+ Sbjct: 300 DEMARQGQTRSALERVQEQLAASRQQSVSAHWQATTIAEGLAAREQQRGQAVQDELQASQ 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFS---------------------QQTSDREHLRQWQQQ 388 WL H F + +GW++++ + L + Q Sbjct: 360 AWLARHAHFAGLGEKLSGWQSEYGQIQQAQQAVQQLQTQQQAQQGELADIETRLARQVQA 419 Query: 389 LTHAEQKLNALAAITLTLTADEVATALAQ-----------HAEQRPLRQHLVALHGQIVP 437 L A + T A Q EQ + L Q+ Sbjct: 420 LQQATARHEQSRQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQLAQQATQLRQ 479 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + Q + ++ + Q+ ++ L+ +R+ Y++ +Q+ D + + QE RI++LEA R Sbjct: 480 LAAQRVQQETSLADTHQQLAEQQTGLDALRRDYRQLKEQVDDKRKLLLQEQRIQSLEAHR 539 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G+ CPLCGS HP +++YQ L+ + L E +++L E G +GQL ++T Sbjct: 540 AALQPGEACPLCGSHEHPGIQSYQQLDSSATERALQDKEAALQRLEETGNAAKGQLASLT 599 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTASLNI---TLQPLDDIQPWLDAQDEHERQLRL 614 + ++ + +L Q Q +W A A L + Q +Q L ++ E L+ Sbjct: 600 GRQEQQQQSLAALAQSLQLAQAEWNARAAPLGLSDNEWQHESSLQQGLTTAEQQEAALKT 659 Query: 615 LSQRHE-----------------------------LQGQIAAHNQQIIQYQQQ------- 638 Q+ E LQ A +++ + QQQ Sbjct: 660 TLQQAETAQQRLAEAQQQEAQSAAQRQEAAQQHELLQQSQAHAAKRLAELQQQRDVASRA 719 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW----------------QQRQN 682 +Q + LL + T+ ++ WLA RQQ+ Q+W QQ ++ Sbjct: 720 AQQASERLLAAIAAAGFTVA--NDMAHWLAERQQDWQTWQAKQREQQQQEAELLKQQARS 777 Query: 683 ELTA-----LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQ 737 E A Q R ++L E + Q +L Q L+ Sbjct: 778 EQAAKLAQVWQARWRKLGVEAPCHRADGVTDEAALARCAERVEALSAQIASLQGQHAQLE 837 Query: 738 QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 + A+ + AL AS F D AF AL+ + +L+ L+Q L+ Q Sbjct: 838 ADLHAQQRQGVDAETAWLAALAASPFADGDAFRQALLPGEERQRLQTLRQQLQQAVEHRQ 897 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 ++ TL QQ + + ++ LA + + ++ QG ++ L DA Sbjct: 898 AVLHTATATLLALQQQ-----ARTPLALAELDAALATLDAQRQALSSQQGALQALLNDDA 952 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 RQ QQ L QQI Q V+ W LNSLIGSKEGDKFRKFAQGLTLD+L+HLAN+ L R Sbjct: 953 LRRQGQQALFQQIEQQAADVDIWQRLNSLIGSKEGDKFRKFAQGLTLDHLMHLANRHLER 1012 Query: 918 LHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRI 977 LHGRYLLQRK + LE+E+VDTWQAD RDTRTLSGGESFLVSLALALALSDLVSHKT I Sbjct: 1013 LHGRYLLQRKPTGELELEIVDTWQADVTRDTRTLSGGESFLVSLALALALSDLVSHKTSI 1072 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 DSLFLDEGFGTLD ETL+ ALDALDA+N+SGK+IGVISHV M+ERI VQI ++K +GLG Sbjct: 1073 DSLFLDEGFGTLDGETLEVALDALDAINSSGKSIGVISHVAGMQERIAVQIVIRKASGLG 1132 Query: 1038 YSKLE 1042 S++E Sbjct: 1133 ASRIE 1137 >UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50_MARAV Length = 1091 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 311/1085 (28%), Positives = 507/1085 (46%), Gaps = 52/1085 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +R KNLNSL GEW+ID FAS+G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MRILQVRFKNLNSLVGEWEIDLMHPAFASDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ V++S N++M+R T C AEV FE + YR WSQ+RAR +PDG LQ P+ E+A Sbjct: 61 LNKVTKSGNEIMSRQTGACFAEVTFETQSGRYRCHWSQHRARKKPDGELQAPKHEIANAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I K++ + + TG+D+ RFTRSMLL+QG FAAFL A P +RA +LE++TGTE Sbjct: 121 SGEIFESKMRGVADQIESATGMDFDRFTRSMLLAQGGFAAFLQAAPDDRAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS V E+ + R +L LQA+ +G+ +L PEQ Q + +L EE L Sbjct: 181 IYSQISIRVHERQREEREKLNLLQAETAGIVILEPEQEQEIAQTLDTRQKEETDLAAKSA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++ WL+ D L++E + + +P L+ A A +L + + Sbjct: 241 EAGKAIAWLSIIDGLKKEIVNLADEESKLHVDIRAFKPDRERLNRALSASSLDGVYATLM 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A R+ ++ L + + + + ++ L + R Sbjct: 301 ATRKQQADDREALKTEEEALPGLESSAKEQAETMSTAEQQTARAKEELKAAAPILQKVRS 360 Query: 361 WNNEPAGW-----------RAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 + + A + ++ +D + + Q++ A+Q L + D Sbjct: 361 LDQKLADQEKAVTAGDEACKKDSAKIDADTQTRLKEQEKRIKAQQALELVEGYLKEHARD 420 Query: 410 E-------------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 E + AL + ++Q L + QK+ + ++ Sbjct: 421 EWLIGGLAGVEEQLRGLLFRQSEALQKESDQETAENALKQATTSLDDCQKQSGIRKQELE 480 Query: 451 NVTQEQTQRNAALNEMR--QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL 508 + +++ Q L+++ + +E + + +I LE RA+L+ G+PCPL Sbjct: 481 DASKQLQQGKDVLSQLLGGRLLREYRTEKETLLREMAFLTKIAELEDHRAKLEDGKPCPL 540 Query: 509 CGSTSHPAVEAYQALEPGVNQS---------RLLALENEVKKLGEEGATLRGQLDAITKQ 559 CG+T HP E Q + E +KKL E + R L A K Sbjct: 541 CGATEHPFAEGNVPASDETEQKIEALTKLINKAENQEAAIKKLEEAESLARKNLTAAEKL 600 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 N+ ++ + + + + A + L ++ E + L + Sbjct: 601 ESAAANDKKAAERTLAEVKGSLEKLRADFAERRHAVSSRLLPLGIENIPETDISSLLETL 660 Query: 620 ELQ-GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ 678 + + + A ++ ++Q+ + E+ L T + E + Sbjct: 661 KARLKEWQAQVKKKADIEKQVADLDSEIKRLDAVIETQSTALAEKRERLETLKTEFAAGN 720 Query: 679 QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 + L + L ++ E + Q+ ++ + ++L++ Sbjct: 721 DERKALYD----DRNPDEEERGLNKAVFDAEGAERQARDQHNQLQQRWHTAKAHVESLRK 776 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 + L + + F AL F D++ FL A + + +L L+ ++ + Sbjct: 777 RIDQREPELGRMETDFSEALTPVGFSDEEQFLGARLTSERRGELAVKANELDERQTDMKA 836 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 LA + D ++E+++ + + + LR+ ++ +L ++ Sbjct: 837 RQKDRETRLATEMARKVTDK-----SLEELEPQFKEYEESLRDLRDIIAGLKHKLSENTA 891 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 +++ + I ++ W L+ LIGS +G K+R FAQGLT + ++ AN+QL ++ Sbjct: 892 AKERIKEKQAAIEAQGKECRRWENLHELIGSADGKKYRNFAQGLTFEMMIGHANRQLQKM 951 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRID 978 RYLL R ++ LE+ VVD +QA +R T+ LSGGESF+VSL+LAL LS + S R+D Sbjct: 952 TDRYLLVRHDAQPLELNVVDNYQAGEIRPTKNLSGGESFIVSLSLALGLSHMASKNVRVD 1011 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 SLFLDEGFGTLD E LDTAL+ L L GK IGVISHV A+KERI QI+V G G Sbjct: 1012 SLFLDEGFGTLDDEALDTALETLSGLQQDGKLIGVISHVPALKERISTQIQVTPQTG-GR 1070 Query: 1039 SKLES 1043 S++ Sbjct: 1071 SQISG 1075 >UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepID=A4XY70_PSEMY Length = 1144 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 472/1148 (41%), Positives = 629/1148 (54%), Gaps = 107/1148 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDF EPFA +GLFAITGPTGAGKTTLLDAICLALYH TPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +S +S S N+LMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ +G LQ P+VELAR A Sbjct: 61 MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVEGALQAPKVELARIA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+IL DK+++K LTA LTGLD+ RFT+SMLL+QG FAAFL A +RAELLEELTGTE Sbjct: 121 DGEILTDKIREKEHLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +YG IS V+E+ K++ L L+++A G+ LL Q L A Q L EE L+ QQ Sbjct: 181 VYGLISQQVYERTKASEQALNLLKSRAQGMELLDEAQRAELQAEHQRLNQEEASLLARQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI- 299 Q W + +Q+ R + L+QA +A +L L+ ++PA L+P ++ Sbjct: 241 ALQGQRRWCEALQQAEQQCERARLGLEQAQQAHNEAAGELQRLAASEPAARLQPLYQSWQ 300 Query: 300 ----------AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 E A R E + +L + L +Q+ +L Sbjct: 301 QLQQDRQQAQQELDDMQAQQRHSSEREHQQLWLASRYARQCLSLHQSEERSLAEQRDALQ 360 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQ-------QTSDREHLRQWQQQLTHAEQKLNALAAI 402 L+ + + GWRAQF Q Q + R + Q ++QL +++ + LAA Sbjct: 361 ARLRATPQRARLGELLGGWRAQFDQRGQLLMRQQTLRAGMAQEREQLATLQRQRDQLAAQ 420 Query: 403 TLT---LTADEVATALAQHAEQRPL-----------RQHLVALHGQIVPQQKRLAQLQVA 448 A QH+E + L R + + G+ + + ++LAQ + Sbjct: 421 QTDAATRLEQAQAREAGQHSELQALLGADDEAGLRQRWQQLQVQGRALDRLEQLAQSREQ 480 Query: 449 IQNVTQEQTQRNAALNE-----------MRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + E T R A L+ +R+RYK QQ+AD + + EQE RI+ LEA R Sbjct: 481 MAEQIAELTPRLAQLHTQHAAKNDEIIGLRERYKVLKQQVADKEKLLEQEQRIQDLEAYR 540 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G+ CPLCGS HPAV YQAL+ + L +++ +L +G TLR +L + Sbjct: 541 AHLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLESQGGTLRDELTRLA 600 Query: 558 KQLQRDEN----------------------------EAQSLRQDEQALTQQWQAVTASLN 589 Q+ + + + +LRQ ++ Q + L Sbjct: 601 TQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQREHEQHLGQLQQRLA 660 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQR--------HELQGQIAAHNQQIIQYQQQIEQ 641 ++ A++ ER L + QR LQ + N+++ +Q++ Sbjct: 661 QVETRQAELTQARSAREIAERALADMQQRLALLARDEENLQARQREQNERLQGLEQELRH 720 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ---------------------QR 680 Q LL +L G+A LP + ++WLA + + WQ + Sbjct: 721 HDQALLASLDGFASELPA--DADTWLAEQASAWRDWQQAQAQHQQVQEQLRETQRLLAEA 778 Query: 681 QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 + Q R Q P+ P +++ + AL +QQ+ Q Sbjct: 779 EARAEQWQQRWQTEQAQALIEPEPVAQPEQALQGAIDSLASAQRESDALRGRQQSQQSLL 838 Query: 741 VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV 800 Q L +A+ ++ AL AS F D QAFL AL+D++ +L L+ L+ +A Sbjct: 839 QQLQQRLSEAEQRWQQALAASPFTDLQAFLDALLDDEERERLTSLQARLQQALTEAT--- 895 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 T A Q + +T+ ++ ++L LRE + QGE+R QL+ D R Sbjct: 896 --TLLAAADAQWQQLSTTPQTELTLAELDEQLQALQLTLRELSQRQGELRAQLQADDARR 953 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG 920 QQ L +IA + W LN LIGS +G KFRKFAQGLTLD+L+HLAN+QLTRLHG Sbjct: 954 SSQQALFAEIAAQESEHALWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHG 1013 Query: 921 RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSL 980 RY L RK+S LE+EV DTWQAD RD RTLSGGESFLVSLALALALSDLVSHKT IDSL Sbjct: 1014 RYQLARKSSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSL 1073 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FLDEGFGTLD ETL+ ALDALD LNASGKTIGVISHVEAMKERIPVQ++V K GLGYS+ Sbjct: 1074 FLDEGFGTLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSR 1133 Query: 1041 LESTFAVK 1048 L++ FAVK Sbjct: 1134 LDARFAVK 1141 >UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivibrio RepID=Q5E5N3_VIBF1 Length = 1226 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 431/1226 (35%), Positives = 610/1226 (49%), Gaps = 185/1226 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSL NLNSLKGEWKIDF+ PFA NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++MTR TAEC AEVEFEVKG+AYRAFWSQ R+R + DGNLQ VELA Sbjct: 61 LGGISTSSNEIMTRGTAECSAEVEFEVKGKAYRAFWSQRRSRGKVDGNLQAATVELAEVD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA +VK K EL T+TGLD+ RFT+SM+LSQGQFAAFLNA +RA LLEELTGTE Sbjct: 121 SEKVLATQVKKKDELINTITGLDFSRFTKSMMLSQGQFAAFLNADANDRAGLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS V E + +++ +L +L+A+A GV LL+ E Q+L L +KQ Sbjct: 181 IYGQISEKVHEHYTASKQKLAELKAKAEGVELLSEEDKQALIDEQTELQANQKQQQAQLV 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQA------------------------------- 269 + Q + W + + QQ+ + + Q A Sbjct: 241 EWQAHVEWWNAEVKNQQQHQQAIEHHQLALDKEKQASEPLHRLAQSEPAEKLRAPYQLWQ 300 Query: 270 --------------LAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHI------ 309 L E Q L+L L+ ++ I S L + Sbjct: 301 EAQERFDEVVKELSLTEVSHQQKTSDKLTLESHVTQLKQVFDDIKVESKTLEALINDSVQ 360 Query: 310 ------------RQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 Q+ ++ L + + H +++ + L +++++H Sbjct: 361 PLDTKISQLTQQSQEKQQNIAHLTTRYEESYKKQQHLTVTLSDVTETLAQLTSYVEKHQS 420 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA---------------- 401 Q W+ Q S + + + ++T A+ L+AL A Sbjct: 421 DVQLERYLGQWKRQVSYISQQDKEVSALNSKVTSAKATLDALLANMTKKETELHQAQVVV 480 Query: 402 ----------------ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQL 445 T ++A +A + R L ++ + + K L L Sbjct: 481 KTEVDALKAAELVLQQSQEKGTEAQLAEQVAALTNRHQYRVELTHVNNEYLRAIKELQTL 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 ++ + + E A E+ ++K+ QQ+ D+ T+ EQE L RA+L Q Sbjct: 541 EMMQKTQSSEIQTLEAQRAELGSQFKQLEQQVIDLTTLIEQEG---ELAKYRAELMKDQD 597 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGST HP +E Q+L+ R E + ++ E+G ++R QLD++ + + ++ Sbjct: 598 CPLCGSTHHPLLEQSQSLDLNATMQRKKEAEQKRAEIVEQGKSVREQLDSLKVKQEHCQS 657 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITL---------QPLDDIQPWLDAQDEHERQLRLLS 616 + + ++ QQW + + +TL Q + + + L A +E +Q+R Sbjct: 658 QCVQFQNIVKSTQQQWSTLLEATQLTLNLGDTDTINQSITECEALLTALNEQVKQVRQAD 717 Query: 617 QRHELQGQIAAHNQ-----------------------------QIIQYQQQIEQRQQLLL 647 +++ Q ++ Q QQ + +Q L+ Sbjct: 718 EKYRAHQNQLQQAQHRLDTVTAGLEYDRKSHQVAAQLQLDDSVKLEQLQQHDAELKQQLV 777 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQR--------------QNELTALQNRIQQ 693 + P+ E ESW ++Q+ Q QQ+ Q+E L ++ + Sbjct: 778 AEIEQTGFNAPKLAEIESWFTQKEQDLQRIQQQISEQQRFIQQQQKLQSEHGHLSEQLSE 837 Query: 694 LTPILETLPQSDELPHCEETVV----------------------------------LENW 719 LT L+T + L + + Sbjct: 838 LTNQLKTTQAENVLLTSDLEQQKAKRVELFGMQEVKVARSEMVKKLGDSEQRYQAGQQKL 897 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 + ++ + + +L+Q + + + AL S F+ + F AAL+ E+ Sbjct: 898 QIRVQELAVIEGKLTSLKQSHANNDKLTAERSGVWKEALLHSPFETLELFQAALISEEER 957 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QL LK ++ + L+ +T QH Q P + + ++ ELAQ Sbjct: 958 QQLLDLKTEIQQAIERTSALLDSAKQTKEQHYQ-MPKATEWQLMPKDTVESELAQVKSIS 1016 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 +GEI Q L+ D + + Q+TL + I + +D YL+SLIGS++GDKFRKFA Sbjct: 1017 ESLVKREGEIAQALRSDDERKTNQKTLFEAIEAYQSEYDDIQYLHSLIGSQKGDKFRKFA 1076 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTL+NLV+LAN+QLTRLHGRY L+RKAS+ LE++V+DTWQ D VRDT+TLSGGESFLV Sbjct: 1077 QGLTLENLVYLANKQLTRLHGRYELKRKASDGLELQVLDTWQGDVVRDTKTLSGGESFLV 1136 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALALALSDLVSHKT IDSLFLDEGFGTLDSETLD ALDALD LNASGK IGVISH+EA Sbjct: 1137 SLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLDMALDALDNLNASGKMIGVISHIEA 1196 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTF 1045 MKERIPVQIKV K +GLG S+LE + Sbjct: 1197 MKERIPVQIKVTKRSGLGVSELEKQY 1222 >UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Nitrosomonas europaea RepID=Q82UT3_NITEU Length = 1087 Score = 542 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 329/1080 (30%), Positives = 498/1080 (46%), Gaps = 50/1080 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +RLKNLNSL GEW+IDFT F S+G+F+ITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MQILQVRLKNLNSLVGEWEIDFTDPAFVSDGIFSITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS+S+N++M+R T EC AEV F + +R WSQ+RA +PDG LQ PR ELA Sbjct: 61 LGKVSKSENEIMSRQTGECFAEVTFAAQSGCFRCHWSQHRAHKKPDGELQNPRHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++ + +TG+D+ RFTRSMLL+QG+FAAFL A P ERA +LE++TGTE Sbjct: 121 SGKILETRLTEVGRQIEKITGMDFARFTRSMLLAQGEFAAFLQAAPDERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E SAR EL++L A +G+ LT Q L ++ L Sbjct: 181 IYSRISIRVHETRVSARRELDRLSAGLNGIQPLTRADEQQFHTDLAQKIQQDAGLNEQIA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 E+Q L WL L+ E Q L+ +E P ++ L A A L + R+ Sbjct: 241 HERQILVWLENIARLESELHLIAGQQQAWLSRKEALTPDISKLDSASRALELLGEYSRLT 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 R + L + + +Q+ + + R+ Sbjct: 301 SIRNEQETDRNNLAICAASLAGLEQAVKQAEQSLKSLNEQCDRQRAKQRETIPLLRKVRE 360 Query: 361 WNNEPAGWRAQFSQ----QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA-------- 408 + + + S T+ ++ L + Q E +L L L Sbjct: 361 LDIQIREKESPISTASKGITAQKKTLAALRNQYQQNEIQLAGLQTTLAGLLQQLHVIQPD 420 Query: 409 ----------------DEVATALAQHAEQRPLRQHLVALHGQ-------------IVPQQ 439 L ++ RQ + L GQ + + Sbjct: 421 GAQMDFAHNQNLLNRKQAEYRQLLENRSLADWRQEIAVLSGQKTLATRAIEAMQSLAASK 480 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 + A+L+ ++ +TQ L + ++++ ++T +I LE R Q Sbjct: 481 QISAELEKHTCSLLAGKTQLAKQLGAEEEMLGALEREISLLETQALLLKKISHLEEARQQ 540 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+ +PCPLCG+ HP A P N + L +K + +TL+ + + Sbjct: 541 LKDDEPCPLCGALQHP-YAAGNTPRPDDNITALNQARTMLKTRIDTISTLKIRQAETNRD 599 Query: 560 LQRD---ENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS 616 +++ + E Q ++ L QQ + ++ L D+ ++ + Sbjct: 600 IEQTACRQQEIHRQIQADETLLQQCAVSLFPGLPSAAMFPELPRLLQETDDKLARMTRIL 659 Query: 617 QRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS 676 Q E+ + ++ + +++EQ+ +L + + Q + E + + Q Sbjct: 660 QTAEILENEISVQRESLDKTRELEQKIGILRVQHQHQSTQIRQHEAELQLRQEQLDQLQQ 719 Query: 677 WQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 +Q ++L + E + +Q L ++ + L Sbjct: 720 ELGNLRTTRLQLFADKQPDQEEQSLTTAIEAAQKSADNARQQLETEIQQYNRLKNRAEDL 779 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 + A L+K Q F L S F D+ F AA + E+ +L Q Q L +++ Sbjct: 780 VKTITTRAVQLEKLQETFAARLTQSGFADEAGFTAACLPEEERRRLAQRAQQLADEKTML 839 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 T L Q D Q LAQ + + G +RQ+L + Sbjct: 840 DTRQKDKTIALQAEQLKSMTDQPRDFHD-----QVLAQLITRQQVLQQEIGGLRQKLADN 894 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 +++Q+QQ +Q I ++ W L+ LIGS +G K+R FAQGLT + ++ AN+QL Sbjct: 895 ENSKQKQQEQLQVIEAQKRECARWDLLHGLIGSADGKKYRNFAQGLTFEVMIRHANRQLQ 954 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 +L RYLL R LE+ V+D +QA +R T+ LSGGESFL+SL+LAL LS +VS R Sbjct: 955 KLSDRYLLIRDPVRPLELNVIDNYQAGEIRSTKNLSGGESFLISLSLALGLSRMVSRNIR 1014 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 +DSLFLDEGFGTLD E LDTAL+ L L GK IG+ISHV ++ERI +I+V +G Sbjct: 1015 VDSLFLDEGFGTLDEEALDTALETLAHLQQEGKLIGIISHVTVLQERISTRIQVIPRSGG 1074 >UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacteria RepID=Q47ER6_DECAR Length = 1155 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 451/1154 (39%), Positives = 611/1154 (52%), Gaps = 114/1154 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEW IDFT+ PF N LFAITGPTGAGK+TLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLKGEWTIDFTKAPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S + ND+MTR TA+CLAEVEFEVKG YRAFWSQ RAR++ DG LQ P+VELA Sbjct: 61 LKTISATDNDIMTRHTADCLAEVEFEVKGAVYRAFWSQRRARDKIDGALQAPKVELA-AG 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL+ + DKL+ A +TGLD+ RFT+SMLL+QG FAAFLNA ERAELLEELTGTE Sbjct: 120 DGTILSTQTNDKLKRIAEITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+IS VFEQ + A+++LE+L+A+A G+ LL+ EQ ++ A + L + Q Sbjct: 180 IYGEISRKVFEQARDAKSQLEQLKARADGMELLSEEQRAAMQAEVTRLDTQLTDTQRRHQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q W + +QE + Q+A A A P L L+ ++PA L+P ++ Sbjct: 240 QTQSQRQWRLDLAQGEQEVKTAEARQQEADAALTAAAPDLKKLADSEPAEALKPLHQQWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ-----------QQQQSLN 349 + SAA +++ ++ + A + + A++ SA++ ++ + L+ Sbjct: 300 QASAACQQTETELKALHAEREKLQAHQLAQHQTASQLSAQVAAQAQQALQQSQREAKQLD 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA--------- 400 + H + Q WR QF Q+ L QQ EQ++ A Sbjct: 360 DFCATHPQRAQLGERLGVWRQQFEQRVKLNRDLAAQQQAQQKLEQEIAETARQSATQASA 419 Query: 401 ---AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ------KRLAQLQVAIQN 451 A TAD R Q L L +Q ++L L + Sbjct: 420 VASAEKAKTTADAALEKTQTEQNLRLAGQTLAELRQHWQGEQAGLNRWQQLEALAQRRRE 479 Query: 452 V--------------TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + Q+ + AL +R+++KE Q+AD + + EQE RI++LE R Sbjct: 480 LAVLQTTQATQVQQGEQKIEAQEKALVALREQHKELAAQVADKQKLLEQERRIQSLETHR 539 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 QLQ G+ CPLCG+ HPA+ Y AL+ ++ L + ++ L ++G + + A Sbjct: 540 RQLQPGEACPLCGAHEHPAIADYAALDVSATETALKEKQALLEALVQKGQQAKTEQAATQ 599 Query: 558 KQLQRDENEAQSLRQDEQALTQQW---------------------QAVTASLNITLQPLD 596 + + Q+ +W Q + ++ N Q L Sbjct: 600 ATQKEWLAQQAKTTQEIARAQAEWTEFLAGLSSETPLATDAWQEAQTLASARNAAEQALA 659 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + L A D+ E+ L + Q + ++ QQ Q QL T L A T Sbjct: 660 KLADRLKAADQGEQALNAARKTATEAAQTLLNASNQLKLLQQTAQTTQLRQTELAKAAQT 719 Query: 657 LPQE--------------------DEEESWLATRQQEAQSWQQ--------------RQN 682 L QE DE WL R E WQQ +Q+ Sbjct: 720 LTQERAELDSKLAATLTDAGYETPDEPTIWLQERDGEWLHWQQTQKRRHELAEILIKQQD 779 Query: 683 ELTALQNRIQQL----------TPILETLPQSDEL---PHCEETVVLENWRQVHEQCLAL 729 A Q + Q P+ E P+ DE P T E + +Q A Sbjct: 780 RFDAAQTQAAQWLERWKTQAAKRPVAEQEPRPDEATDDPAAALTRSAETIADLTQQLAAQ 839 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 +Q L+ +++ +A + TAL AS F D A+ AAL+ +L+QLK+ Sbjct: 840 QGRQTQLETNVTQQKKAVDEASTAWQTALAASPFADLAAYAAALLPTDERQRLQQLKEAR 899 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRP--DDGLALTVTVEQIQQELAQTHQKLRENTTSQG 847 + ++QA+ ++ E L + Q P D + + +++ LAQ RE + G Sbjct: 900 QLAKQQAEAVLKAAGEKLLRLQTTPPPQDSAESPIPPLAELEAALAQLETSRRELSEQLG 959 Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 R L +D RQ QQ L + IA T + + W L+SLIGS GDKFRKFAQGLTLD+L Sbjct: 960 AQRALLTRDEQARQSQQALFKDIAAQTAESDLWQRLDSLIGSARGDKFRKFAQGLTLDHL 1019 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 +HLAN L RLHGRYLL+RK + LE+++VD+WQ + RDTRTLSGGESFLVSLALALAL Sbjct: 1020 LHLANSHLARLHGRYLLRRKTTGELELDIVDSWQGEVARDTRTLSGGESFLVSLALALAL 1079 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 SDLVSHKT IDSLFLDEGFGTLD++TL+ AL+ALD LNASGK IGVISHVE MKERIP Q Sbjct: 1080 SDLVSHKTSIDSLFLDEGFGTLDADTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQ 1139 Query: 1028 IKVKKINGLGYSKL 1041 I+V+K G+GYS+L Sbjct: 1140 IRVEKGGGVGYSRL 1153 >UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enterobacteriaceae RepID=B2VIR7_ERWT9 Length = 1119 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 498/1129 (44%), Positives = 643/1129 (56%), Gaps = 101/1129 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR KNLNSLKGEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L N++QSQNDLMTRDTAECLAEVEFEVKG A+RAFWSQNRAR DGNLQ PRVELARC Sbjct: 61 LKNITQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQNRARGAVDGNLQAPRVELARCE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D I+ADKVKDKLE A+LTGLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 121 DNHIVADKVKDKLENIASLTGLDFERFTKSMMLSQGQFAAFLNADANKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S+ VFE+HK A+T L+ L+AQA + LL EQ QSLT+ L L D+E+ L + QQ Sbjct: 181 IYGRLSSAVFERHKEAKTALDALRAQAGAMDLLDAEQQQSLTSQLAQLLDDERVLTSQQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +QQ+L L + + LQQE + QQ + E+A+ QL A L + + L+ + + Sbjct: 241 GQQQALQQLQQLERLQQEQQQLSHQRQQLDEQIEQAKRQLGAADL-EQQQALKAYDDHQQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS------------- 347 I +Q+ ++ +L + + ++ L + Sbjct: 300 HRQQQETLIAEQVIPLDHQLATLQEQSEQLAREQSEHQQLLTARLTESAKNQQIQQDKQA 359 Query: 348 ----LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT------------- 390 LN W + H F + WR +F+QQ + L Q+L Sbjct: 360 QQQLLNQWREAHPHFSHYGEHLPLWRERFNQQQQSEQSLLALSQRLKLQQQTVQQQEQAL 419 Query: 391 -------------------HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVAL 431 Q ALA + + + AL Q + RP RQ L L Sbjct: 420 QQLSQQAAPLQQQLDAAQHSLNQAQQALAPLQQQHPQESLRNALEQFSRLRPHRQLLATL 479 Query: 432 HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK 491 Q +R ++L+ Q + Q+ Q + L +R R+ EK Q D+ C E RI Sbjct: 480 LPQWRQLGERRSRLKQEQQALAQQIQQCSEQLLTLRTRWAEKRQHEQDLDKRCRLEQRIA 539 Query: 492 TLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG 551 LE QRA L++GQPCPLCGS +HPA+ Y+ALEP NQ RL L+ EV+ LGE+G+ + Sbjct: 540 DLEQQRALLESGQPCPLCGSENHPAIAEYRALEPSENQQRLNGLKEEVRVLGEQGSACKA 599 Query: 552 QLDAITKQLQRDENEAQSLRQDEQALTQQW------------------------------ 581 QL + QR + + L + L QQW Sbjct: 600 QLKQQQELAQRQQQDDDDLARQATELEQQWHGAAALLALAFSPDQHQQAHDWLAQQEQQE 659 Query: 582 -------QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR-HELQGQIAAHNQQII 633 + +L Q + + A + ERQ L Q + ++ QQ+ Sbjct: 660 SELQQQLNRLEQALRHCQQQQESLYQQQQAWQQLERQTALHQQEMTTTRHSLSELEQQLE 719 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 Q +Q+ Q + L +L L LP++ + + WL R+Q+ Q WQQ EL L + Sbjct: 720 QDRQRARQLRGDLAASLAPLELQLPEDGDYQGWLQIREQQWQQWQQNAAELATLAPELAA 779 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + L + + RQ + Q+Q L + + + Q Sbjct: 780 LGSRQQALEEERRQQQSRLEALDARSRQQQQTLSECQQQRQRLFGNAL-----VTSVRQQ 834 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + + + Q + + L ++L Q + + + + + Q Sbjct: 835 LNGESEKHQHNLHQQQQQWQRLQDRINTLTGQHKSLNEQLVNLHSRLDEAVKRVEQ---- 890 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 LT + +Q L Q+LRE + QG++RQQL DA R QQQ+L+ Q+A Sbjct: 891 ----PENLTAQQQILQASLEALSQQLRELASRQGQLRQQLDHDAARRLQQQSLLAQVAAN 946 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 QQ+EDW YL+ LIGSK+G KFR+FAQGLTLD+LV LAN QL+RLHGRYLLQRK+ EALE Sbjct: 947 EQQLEDWSYLHDLIGSKDGSKFRRFAQGLTLDHLVWLANNQLSRLHGRYLLQRKSQEALE 1006 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 +EVVDTWQ + RDTRTLSGGESFLVSLALALALSDLVSHKTRI+SLFLDEGFGTLD++T Sbjct: 1007 LEVVDTWQGETRRDTRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAQT 1066 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 LD+ALDALDALNASGKTIGVISHVEAMKERIPVQI+V+KINGLGYS+L+ Sbjct: 1067 LDSALDALDALNASGKTIGVISHVEAMKERIPVQIRVRKINGLGYSRLD 1115 >UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales RepID=B7VP61_VIBSL Length = 1240 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 416/1244 (33%), Positives = 603/1244 (48%), Gaps = 203/1244 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NLNSLKG WK+DFT+ PFA NGLFAITGPTGAGKTT+LDAICLAL+H TPR Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++++ N+LMTR T EC AE+EFEV+G+ YR+ + Q RAR + DG LQ P E A Sbjct: 61 LKSIAKGNNELMTRGTGECFAELEFEVQGKTYRSNFHQKRARGKHDGALQTPTCEFADAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+L + K +L +TGLD+ RFT+S++LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 TDKVLETMLTKKTKLVEQVTGLDFSRFTKSIMLSQGEFAAFLNANANDRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +Y IS +++ KS+ L L+A+A GV+LL+ EQ+Q LTA + L E+K+L + Sbjct: 181 VYSLISERIYDHFKSSEESLNHLKAKAEGVSLLSEEQIQELTAERETLEAEQKRLAEQLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN-------LR 293 + Q L+W + +Q + + L+ A E ++ QP L L+ ++PA L+ Sbjct: 241 EWQAHLSWWKDVTKAEQTIATSEHDLKTAQDELDRNQPSLERLANSEPAEKLRPMHKGLK 300 Query: 294 PHWERIAEHSAALAHIRQ-------QIEEVNTRLQSTMALRASIRHHAAKQSA------- 339 + + A L + + + ++ T+L + A+ ++ Q Sbjct: 301 RCEQEVNTTQAHLDNSSKLLAVRDAEKQDAQTKLTQSSAIVEQVKTEQQDQEKIIDLVRP 360 Query: 340 -----------------------------------------ELQQQQQSLNTWLQEHDRF 358 L+QQ Q +L H Sbjct: 361 LDNQIAVLKDKQTAAVNAANTLNEQHTQQRNQQIVLVQKIDALKQQDQLSTEYLNTHQTD 420 Query: 359 RQWNNEPAGWRAQFSQ----QTSDREHLRQWQQQLTHAEQKLNALAA------------- 401 + W+A+ Q + E L +Q L+ + + + + Sbjct: 421 QHLEKYLGQWQAKVEQVRTLERQHAEQLNSAKQTLSAVDAQQTIIKSAQEAKATQDKTLS 480 Query: 402 --ITLTLTADEVATALAQHAEQRPL-------------RQHLVALHGQIVPQQKRLAQLQ 446 + L +A + AL + ++ L L+ ++ + Q++L Sbjct: 481 ELVVLESSAKQQWVALQGNISEQVLNAQKDLLEYWNRNTHSLLEINRGFLNAQQQLHAKT 540 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 A Q TQ + + + +RYKEK L + + +QE L RA L++G C Sbjct: 541 QAHQTNTQLVDKLSKEREVLVERYKEKETSLERLTRLIDQEG---ELAKYRAALESGSEC 597 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 PLCGST H ++E Q V Q LE + + +EG R QLD++ + ++ Sbjct: 598 PLCGSTDH-SIEQSQDTANLVAQKETENLE--LTAIKKEGQEHRQQLDSLAPMIAALNDD 654 Query: 567 AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWL------------------------ 602 Q + D Q WQ V L +L P L Sbjct: 655 IQRAQADIQQAQLNWQGVVGKLQHSLSDFVGTAPELALLTINDLGNEAIVATFAQQCEVQ 714 Query: 603 -----------------------------DAQDEHERQLRLLSQR-HELQGQIAAHNQQI 632 D+ + L L QR +L Q + N+Q+ Sbjct: 715 LSQFSQQLKALADAKAHYAEAEKQRLSASVMADKAQSNLELAEQRLADLNKQNHSTNEQV 774 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 Q Q EQ+ L ++ A+ P+ + + W + Q + +WQQ + + ++ ++ Sbjct: 775 AQIAQTKEQQWNALKESIVQTAIEAPELEHIDDWFTAKSQASSTWQQTKQQQADIEKQLI 834 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL---------------- 736 L+TL E + + + + + +++ L Sbjct: 835 TQNAELKTLDDKLSSVEKELATLTQQSESLVLELTRISAERTELFGDKDIQATSNAMKQK 894 Query: 737 --------------------------------QQQDVLAAQSLQKAQAQFDTALQASVFD 764 ++ S +A + AL+ S F+ Sbjct: 895 VTEAVNAFDAAQLVLNRSELEHRTEQTKHISFSEELTSKQSSYTQASNAWLEALKTSPFE 954 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 D+ F AAL+DE+ TQL+ LK++L+ AQ + T + Q H Sbjct: 955 DEVNFEAALLDEEVRTQLQSLKKSLDEAIVSAQARLNTAKATQVELQNHVNAKAWQEQEQ 1014 Query: 825 VEQIQQ-ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 +Q + + + + T G I L+ D+ NR QQ L +QI + + +D L Sbjct: 1015 DQQQVEEATTECQNAQQSHATKIGAISANLETDSQNRSNQQDLFKQIDEQQVEFDDISRL 1074 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 NSLIGSK GDKFRKFAQGLTL+NLV+LAN+QL RLHGRY L+RKA + LE++V+DTWQ D Sbjct: 1075 NSLIGSKNGDKFRKFAQGLTLENLVYLANKQLQRLHGRYELKRKADDGLELQVLDTWQGD 1134 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +RDT+TLSGGESFLVSLALALALSDLVS+KT IDSLFLDEGFGTLDS+TLD AL+ALD Sbjct: 1135 VMRDTKTLSGGESFLVSLALALALSDLVSYKTSIDSLFLDEGFGTLDSDTLDIALNALDN 1194 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 LNASGK IGVISHVEA+KER+PVQ+KV K +GLG S++E + V Sbjct: 1195 LNASGKMIGVISHVEALKERVPVQLKVTKHSGLGVSEMEKQYKV 1238 >UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=A9BQD0_DELAS Length = 1165 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 444/1169 (37%), Positives = 599/1169 (51%), Gaps = 136/1169 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT+ PFA NGLFAITG TGAGK+TLLDAICLALYH+TPR Sbjct: 1 MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+N+S S NDLMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELAR Sbjct: 61 LNNISASANDLMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDRLDGALQAPKVELAR-G 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL+ + +DKLE TA +TGLD+ RFT+SMLL+QG FAAFL A ERA LLEELTGTE Sbjct: 120 DGSILSSQTRDKLEQTAAITGLDFERFTKSMLLAQGGFAAFLQANANERAGLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VFE+ + AR L++L+AQA GV LLTPE +L A L E+ L Sbjct: 180 IYGLISQKVFERARDARQRLDQLKAQADGVELLTPEARDALQAQADSLVTEQATLQADYL 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q W + + Q + A E+A P+L L+ +PA+ L+P + Sbjct: 240 RAQAQHQWQQQLAQATQTLQAARTGCADAAQALEQATPELERLAHDEPAQALQPLHQAWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMA-----------LRASIRHHAAKQSAELQQQQQSLN 349 +AA RQQ++++ Q T A L A + A A Q + Q+L Sbjct: 300 RSTAACDDSRQQLQQLREHEQQTQARLLLQHRHAQALSARLAQAAQDTLARQQAEHQTLE 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT------ 403 + +H WR QF + S ++ QQ L + + +A Sbjct: 360 QFCTQHAAHALLGERLGSWRQQFKLRASQQQQAANQQQALRKLDAEQARMAQSAEAGTAQ 419 Query: 404 --------------LTLTADEVATALAQHAEQRPLRQHLVALHGQIV------------- 436 L DE A L LR A ++ Sbjct: 420 VQAATDAQARVSAALQHAQDEQAQRLQGSGGMAELRAREQAEQDRLHLWRQAETQAAQRR 479 Query: 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQ 496 ++ A L+ +++ + ++ +L +RQ+YK +Q+AD +T+ QE RI++L Sbjct: 480 ELARQQAALEQELRDGEAQARAQDTSLQALRQQYKSVKEQVADKQTLLLQEQRIQSLSEH 539 Query: 497 RAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 R LQ GQPCPLCG+ HPAV AY+AL+ ++ L ++E+ L +G T R L A Sbjct: 540 RHALQPGQPCPLCGAHEHPAVAAYEALDASATEAALRRKQDELDALQTQGETARATLAAT 599 Query: 557 TKQLQRDENEAQSLRQD---------------------EQALTQQWQAVTASLNITLQPL 595 T + +A L QD QQ + AS + L Sbjct: 600 TAAQAARQRQADELEQDIARWHGTWNDTWQGLTQPLQLAPDSWQQADTLAASAQACARQL 659 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQI----------------------AAHNQQII 633 D ++ + A ++ E+ ++ + Q Q I Sbjct: 660 DTLKRAVQAAEQGEQAVQQAKDAAQHSRQSLQTAQGQLALQQQALADHSARREELQQSIA 719 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 Q + + L +L TLP D+ + WL R+ E Q WQQ +++L L + Sbjct: 720 GLQAEAQALNAQLQASLGEAGHTLP--DDAQPWLEAREAEWQHWQQARHDLQQLAQSMAL 777 Query: 694 LTPILETLPQSDELPHCEETVVLENW---------------------------RQVHEQC 726 E + + E Q+ + Sbjct: 778 QRKECEAAEADAQRWKTQSETQWEAQWEEQRTAQPHPADTAVAEPPSLPLPPVEQLPQAL 837 Query: 727 LALHSQQQTLQQQDVLAA--------------QSLQKAQAQFDTALQASVFDDQQAFLAA 772 S L ++ + +A++ + AL AS F D+ AFL A Sbjct: 838 AECASDIAALTRRQDALQGQQQQAQATLARQREEAAQAESAWQAALAASPFADESAFLQA 897 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL 832 L+ +L L+Q L+ +++A TL+ A Q D E IQ L Sbjct: 898 LLPASERQRLAALRQQLQAAQQRAATLLEAAQREHADLQAQALTDLAP-----EAIQALL 952 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 ++ + G R QL D RQ QQ L + IA + W +L+ LIGS +G Sbjct: 953 QTLQERHTALSEQLGGTRAQLADDQRRRQGQQALFEHIAAQASDSDLWQHLDGLIGSAKG 1012 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLS 952 DK+R+FAQGLTLD+L+HLAN L RLHGRYLL+RK LE+++VD+WQ D RDTRTLS Sbjct: 1013 DKYRRFAQGLTLDHLLHLANLHLARLHGRYLLRRKPEGELELDIVDSWQGDTPRDTRTLS 1072 Query: 953 GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 GGE+FLVSLALALALSDLVSHKT IDSLFLDEGFGTLD++TL+ AL+ALD LN SGK IG Sbjct: 1073 GGEAFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDADTLEIALNALDRLNDSGKMIG 1132 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +ISHVEA+KERI VQ++V+K G+G+S+L Sbjct: 1133 IISHVEALKERIAVQVRVEKGGGVGHSRL 1161 >UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLX9_9BACT Length = 1194 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 310/1205 (25%), Positives = 543/1205 (45%), Gaps = 170/1205 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L LR KNLNSL+G W IDF + + + LFAI GPTG+GK+T+LDA+CLALY TPR Sbjct: 1 MRLLRLRFKNLNSLEGRWSIDFRDQRYLDDCLFAIVGPTGSGKSTVLDALCLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS V+ S+N++M+R T EC A+VEFE GE+YR WSQ+R+R P G LQ P L+R + Sbjct: 61 LSRVTGSENEIMSRKTGECFAQVEFEAGGESYRCTWSQHRSRKSPSGKLQQPTHLLSR-S 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G++L + + LTGLD+ RFTRS+LL+QG FAAFL+A P +RA LLE +TGTE Sbjct: 120 NGEVLESALSKTSSAVSDLTGLDFDRFTRSVLLAQGGFAAFLDASPGDRAPLLERITGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 I+ +IS V E+ + L+ L+ + + P + + L L + +++ + + Sbjct: 180 IFSRISIAVHERKRKEEEVLKDLKNRLASEVEDGPSG-EEVKRDLDGLEIDIERISSDLK 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + + + L ++ L+ E + + E + L L + A+ L +ER++ Sbjct: 239 EMESRIGSLRERERLESEIKNIELLIADLEEERLSRKIDLGRLERYRSAQTLAAPYERLS 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 LA + + E++ ++S + + + + + S+++++ + ++ + + Sbjct: 299 SIRERLAELDSSLLEIDRSIESAFSEVRARKEESERLSSDIREMEIERERFIPIWRKAKD 358 Query: 361 WNNEPAGWRAQFSQQT----SDREHLRQWQQQLTHAEQKLNALAAITLTLT--------- 407 ++ R+ S++ +R+ L + ++++ E++L AL + Sbjct: 359 MDSHIGSLRSSLSERERARDDERKGLSKIEERILDVEKELEALEKSKKLWSLRMERMEGW 418 Query: 408 ----------ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 + + +E L L L ++V + L + ++ ++ +T E Sbjct: 419 DSLIPRLSDIEERLRRFRVLSSELESLEGRLPRLSKEVVERSSDLDRSRLELEGLTDEVE 478 Query: 458 QRNAA--------------------------------LNEMRQRYKEKTQQLADVKTIC- 484 + L E R E +Q+ ++T Sbjct: 479 SLEKSKVRQDSRLKRLLSGRPIAEWRAMEAFFRRSISLFEGESRSVELEKQIVTLRTDLR 538 Query: 485 ---------------------------EQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 E AR ++E QR L G PCPLCG+ HP Sbjct: 539 KKEADLMVLAEKAGLLDSLVESLDKRREDRARTLSMEVQRGSLVDGCPCPLCGALHHPYS 598 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + G+++ + + E+ +L +E L ++ + QL+ E E L + ++ Sbjct: 599 SKVPGFDDGLDE-EWRSRKAELSRLRDEKIRLETTVETSSDQLKGMELERSELLRSIESE 657 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ-------------------- 617 + SL++++ P D+ + L+ + E++L+LL + Sbjct: 658 RSALMSSAKSLSLSI-PSDEGKSLLEKR-RLEKRLKLLDRISEIRDEKRGRLENLRSSIG 715 Query: 618 ------------RHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE- 664 EL+ + ++ + + + L L+ L + + E E Sbjct: 716 EKERAVHRIELSLSELENSLRVAREKKSRLVGDLSSIKISLEADLSPVGLDIGDDLETEI 775 Query: 665 ---------------SWLATRQQEAQSWQQRQNELTALQNRI--------QQLTPILETL 701 S L ++ + ++ + E ++L NR+ ++ I + L Sbjct: 776 SEGALEFEKVSRSLDSLLDSQTELLADKRELEAERSSLSNRLKVISEGIKEREEEIAKRL 835 Query: 702 PQSDELPHCEETVVLENWRQ------------------VHEQCLALHSQQQTLQQQDVLA 743 + L V E++ Q + + + ++ Sbjct: 836 VERKTLFPGNPDVAEEDFDARLKELSSELERVKRFLAVSERQLDSYRESRGNISKEAASM 895 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 L A+ F + + + F+A+ D+ + +L ++ N++ A+T + Sbjct: 896 KLELASAEVAFGELCRKAGLSGEPDFVASFRDQDDMEELSLWMEDWRNRKNTAETNLADR 955 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 A + +D ++ E ++ E +G + +L + + + + Sbjct: 956 KSRKASIGEFDGEDLRSVEAKAEALRSER-------DLKLAEKGRLNAELDRIEEMEKSR 1008 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL 923 L ++ + VE W L+ LIGS +G +FR FAQG+ L+ LAN +L R+ RY+ Sbjct: 1009 SELKSRLKEQVSNVELWRGLHGLIGSADGKRFRSFAQGIAFKTLISLANGELRRMTDRYV 1068 Query: 924 LQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLD 983 L K E +E+ V D +QA +R TR LSGGE FLVSL+LAL LSD+ S K R+DSLFLD Sbjct: 1069 LLPKEDEPMELLVKDFYQAGEIRSTRNLSGGERFLVSLSLALGLSDMSSRKVRVDSLFLD 1128 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFGTLD LD AL+AL L GK IGVISHV A++ERI +I+V+ +G G S+L Sbjct: 1129 EGFGTLDEAALDQALEALSELRRGGKLIGVISHVSAIRERIGARIRVEP-SGGGRSRLSG 1187 Query: 1044 TFAVK 1048 ++ Sbjct: 1188 PGVLR 1192 >UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J7H7_COMTE Length = 1143 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 431/1147 (37%), Positives = 566/1147 (49%), Gaps = 112/1147 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LRLKNLNSLKGEW IDFT PFA NGLFAITG TGAGK+TLLDAICLALYH+TPR Sbjct: 1 MRILKLRLKNLNSLKGEWNIDFTAAPFADNGLFAITGSTGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++S S ND+MTR T EC AEVEFEVKG AYRAFWSQ RAR +PD LQ PRVELA A Sbjct: 61 LDSISGS-NDIMTRHTGECEAEVEFEVKGVAYRAFWSQRRARGKPDAALQAPRVELALVA 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL +KDK A +TGLD+ RFT+SMLL+QG FAAFL A ERAELLEELTGT+ Sbjct: 120 DGSILTTHIKDKTRRIAEITGLDFARFTKSMLLAQGGFAAFLQATANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+IS VFE+ + AR LEK QAQA G+ LL + L + +L L Q Sbjct: 180 IYGRISQSVFERARDARQALEKQQAQAQGMQLLDAGTREQLQSQAALLQTGLTDLQARHQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q W + + +E + + A A A L L PA+ ++P R Sbjct: 240 QLQTVQRWQAQTMQAMEEVEQARNAQANAQQALSDAAQDLLRLQAHGPAQAIQPMHHRWQ 299 Query: 301 EHSAALAHIRQQIEEVNT-----------RLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + Q+++++T + Q L + Q Q +Q L Sbjct: 300 LAQDQQSEQAAQLQQLHTLRLRAQSAQWHQHQQARQLAGDQLQQSRLQLQSAQARQADLT 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ--------------- 394 W Q H +GWR Q Q + Q + Q+T ++ Sbjct: 360 AWQQAHASHALLGENLSGWREQLQQGQQLQRQTVQTEGQMTQLQKLARQLQQQADAQTQQ 419 Query: 395 -----KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 + + + L H LR H Q+ Q+ + Sbjct: 420 STQSTRQVSQTLQQQQAAEQALQQQLTTHGSLSQLRSHWQNAERQLHHWQQLQEHAALRQ 479 Query: 450 QNVTQEQTQRNA-------------ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQ 496 Q+Q A +++R +YK +++AD + + +QE I++L+ Sbjct: 480 PLDVQQQRNSQALSSVDSRIQEQLAQRDDLRAQYKALKEKVADKQALLDQERLIQSLQEH 539 Query: 497 RAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 RA LQ G CPLCGS HPA+ Y AL+ + L ++E++ L +G L L Sbjct: 540 RAALQPGDACPLCGSQDHPAITEYAALDVSATAAALQQAQSELESLQRQGEQLNTALATA 599 Query: 557 TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD----------------DIQP 600 Q Q+ + + Q++ Q + +W + A + L I Sbjct: 600 QGQRQQQQEQHQAIAQQIEKWLSRWADLRAQSAVPLDEAAWQQPEALRTARAEAGQQIVQ 659 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + E R L Q + H QQI Q Q Q LT A L Sbjct: 660 LQQNLADAETAERQLQQSKDACQAALQHQQQIEYAQASTRQALQNNLTQQEQTAQALQAL 719 Query: 661 DEEESWLATRQQEA--------------------------------QSWQQRQNELTALQ 688 ++ L TR Q A Q+ Q+ ++ LQ Sbjct: 720 MQQAGGLQTRLQLALQTAGYALPDSADTADWLDARQQEWQQWQRQQQAMQELTQQIDLLQ 779 Query: 689 NRIQQLTPILETLPQSDEL--------------PHCEETVVLENWRQVHEQCLALHSQQQ 734 +++Q E Q + Q +Q L Q Sbjct: 780 RQVEQAAQDAEHWLQRSQALPDMSADATAYTVPAAATLQDCRVLLEQTAQQLARLQGQAS 839 Query: 735 TLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRR 794 Q QS ++AQA++ ALQAS F D+ + AAL+ + L+ L L+ + Sbjct: 840 QAQATLEQLQQSTRQAQAEWQQALQASPFSDEAQYTAALLSDAEQQGLQALSNQLQGAAQ 899 Query: 795 QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLK 854 +A L ++ L Q D E I +++ Q + + G R +LK Sbjct: 900 RAAALQADASQRLTALQTQALSDEAP-----ETITEQITQLETERAQQAEQLGAHRARLK 954 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 D D R QQ L+ +IA+ Q + W +L+SLIGS GDKFRKFAQGLTLD+L+HLAN+ Sbjct: 955 DDDDRRAGQQALLARIAEQEQDSDLWQHLDSLIGSARGDKFRKFAQGLTLDHLLHLANRH 1014 Query: 915 LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK 974 L RLHGRYLL+RK + LE+++VD WQ D RDTRTLSGGE+FLVSLALALALSDLVS K Sbjct: 1015 LERLHGRYLLRRKPTGELELDIVDGWQGDVARDTRTLSGGEAFLVSLALALALSDLVSSK 1074 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 T IDSLFLDEGFGTLD +TL+ AL ALD LNASGK IGVISHVEA+KERIP QI+V+K Sbjct: 1075 TSIDSLFLDEGFGTLDGDTLEMALAALDTLNASGKMIGVISHVEALKERIPAQIRVEKAA 1134 Query: 1035 GLGYSKL 1041 G+GYS+L Sbjct: 1135 GIGYSRL 1141 >UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=C6DB13_PECCP Length = 1227 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 483/1228 (39%), Positives = 643/1228 (52%), Gaps = 182/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLN+LKGEWKIDFT+EPF+SNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+ NDLMT +T+ECLAEVEFEVKG YRAFWSQ RARN PDGNLQ P+ ELA Sbjct: 61 LGQLSEKHNDLMTHNTSECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELALIE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K+ DK +TGLD+GRFTRSM+LSQGQFAAFLNA+PK+RA+LLEELTGT+ Sbjct: 121 GGRILCEKITDKKNRVEQITGLDFGRFTRSMMLSQGQFAAFLNAQPKDRADLLEELTGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V+++H+ A L LQ +AS + LLT EQ Q + L +E+Q ++ Sbjct: 181 IYGLISERVYDKHRQALEALNMLQTRASSIQLLTDEQRQQVEVQLAERIQQEQQGNVERE 240 Query: 241 QEQQSLNWLTRQDELQ-------QEASRRQQALQQALAEEEKA--------------QPQ 279 Q +L W + + Q + + + A+QQA + +K + + Sbjct: 241 QALTTLRWFEQLTQQQTSVTHTQAQHTSAESAIQQARPQLDKLANSEPAEKLRPLHQEKE 300 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ-- 337 + A+ + ++A AL + QQ E+ + +R +Q Sbjct: 301 RYRQASLTLAQQIEQLNGKLAAEQLALRTLHQQEEKAEQDVSEHKQIRQQQEQLINEQVV 360 Query: 338 ----------------------------------------SAELQQQQQSLNTWLQEHDR 357 + ++Q + + ++ Q+H Sbjct: 361 PLDHRIATLEQQKNQQQNELAKTQARLHADDAKQTLVAAEQQQAKRQLEQIQSYRQQHAH 420 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA--- 414 +QW WR QF Q ++ ++ Q+ + A L A + Sbjct: 421 HQQWGELLPLWRTQFRQLRQLQDEHQKLNQKQAQHTAESTARQQEADKLAAQQREQQKVV 480 Query: 415 -----------------------------LAQHAEQRPLRQHLVALHGQIVPQQKRLAQL 445 Q +Q+ + L + Q Q R Q Sbjct: 481 DAVRQQFTQHDETRQHQDTHQPLSTLHQRFNQLMDQQATCRQLATVSDQYQRLQVRKQQH 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + Q + + +++++++LAD++TI QE I LEA+R +LQAG+ Sbjct: 541 LAKLAEAQGHIDQSEILQKQQQSEHQQRSERLADLETIYRQEVHIVKLEAERQRLQAGEA 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGST HPA+E YQAL+P Q RL AL+ +V +L A +L+A +Q ++ ++ Sbjct: 601 CPLCGSTEHPAIERYQALQPSETQRRLTALQQDVNQLTIALANTTAELNARLQQREQLQS 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNIT--LQPLDDIQPWLDAQDEHERQLRL--------- 614 E + QAL Q WQ+V+ L +T L+ D+I WL ++ E+ +R Sbjct: 661 ELAQCDSEHQALLQHWQSVSERLQVTYSLEQQDEIAVWLTLREAEEQAIRQQIAAREQSQ 720 Query: 615 ---------------------------LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 Q+ L Q + QQI Q+ Q + Sbjct: 721 KLWQESKDLLTAAEALLRDLEQKIALNAQQQTSLDVTQEETTQSLQNAHQQITQQTQDIT 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL--------- 698 TL L LP D ++ WLA R E Q+W+ ++ E + L + L L Sbjct: 781 QTLATVGLLLPDTDTQDGWLAQRDSEWQNWKAKEQEQSRLTPLLATLESDLQHLRHSVSE 840 Query: 699 ---------------------------------------ETLPQSDELPHCEETVVLENW 719 E L ++ + + Sbjct: 841 ATQHIQTQQQQLAQHLAQLNTSQQERKVLFGDKQITDVREQLQRTSQQRDDALRLAQSAR 900 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 +Q L + + QQQ + + A +F ALQ S F D+ AFL AL+DEQ Sbjct: 901 QQTETALSRLTGELASTQQQYEQSTCQHESATERFTLALQQSTFVDETAFLHALLDEQER 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 L++ K+ L + +QA TL Q + L +HQQ RP L T E IQQ+LA L Sbjct: 961 QTLQEFKETLHQRLQQAATLRQQAEQALLEHQQKRPA-SLTEDATQEAIQQQLAALDDTL 1019 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 + N QGE ++QL D RQ QQ L+ +IAQ Q+ +DW LNSLIGS +GDKFRKFA Sbjct: 1020 KTNLRQQGEFQRQLSDDKQQRQNQQNLLNEIAQSQQKNDDWETLNSLIGSSKGDKFRKFA 1079 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LV+LAN QL+RLH RY L+RK LE+ V+DTWQADA RDT+TLSGGESFLV Sbjct: 1080 QGLTLDHLVYLANLQLSRLHDRYQLKRKPGGDLELLVMDTWQADAERDTKTLSGGESFLV 1139 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL+LALALSDLVSHK IDSLFLDEGFGTLD+ETLD ALDALD LNASGKTIGVISHVEA Sbjct: 1140 SLSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEA 1199 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERIPVQIKV+K+NGLG S+L +AV Sbjct: 1200 MKERIPVQIKVQKVNGLGVSRLAPQYAV 1227 >UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Providencia RepID=B6XA37_9ENTR Length = 1227 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 467/1228 (38%), Positives = 643/1228 (52%), Gaps = 183/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT EPFASNGLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+S+N+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+ DGNLQ P+ ELA A Sbjct: 61 LGQISKSKNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRANNKADGNLQDPKAELATVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+I+A+KV + E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGQIIAEKVSEIREKIVQITGLDFGRFTKSILLSQGDFAAFLNATEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS +F QHK A+T+L+ L+AQAS V LLT + Q L Q + +E+QL ++ Sbjct: 181 IYSQISVYIFNQHKQAKTDLDLLRAQASSVNLLTEIEYQELVEKQQQYSAQEQQLSQSKL 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW---- 296 + QQ++ W + +L Q R Q A QQA + A+PQL L+ + PA LRP W Sbjct: 241 RHQQAVTWHQQYQQLAQNTQRLQLAQQQAQQRYQVAEPQLHKLAQSSPAEALRPDWLAVQ 300 Query: 297 ---ERIAEHSAALAHIRQQIE--------------------------------------- 314 ++ E + I Q +E Sbjct: 301 SLQTQLDEQTQKQQRITQHLEEAQKQRLPLVTQHAQAQLEQNQYNEWVQKTTVMIDNEVR 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ RL + + ++ ++E Q++ S+ Q+ D + N+ + + + Sbjct: 361 PLDNRLSQLNQQKLQLSEQLSQLNSEYLQKKASVENAQQQIDHAKSGLNKTQLFLQEHAN 420 Query: 375 QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQH------- 427 L +WQQQ + L A ++ Q A+ + L++H Sbjct: 421 DAQIITQLGRWQQQGQFVYELTEQLTKNQQKQHAIKLEWQTLQQAQLQKLKEHQKAQLSL 480 Query: 428 ------------------------------------------LVALHGQIVPQQKRLAQL 445 L L Q + +++ Sbjct: 481 ETFHSRFNQLEKQFQEYKEKHDISAINALIIQLQAQLQHAQILPLLLSQHEEKHQQVQLH 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + + Q + + R + Q ++ + E +I +LE +R QL G P Sbjct: 541 IQQQNQLAESIQQVEKLIAITQDRVTQLEPQRQVLEQKLQLEQKIVSLEHERQQLIEGTP 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGS HPA+EAY A+ P Q +L+AL +++ ++ + L A ++ Q +E Sbjct: 601 CPLCGSLKHPALEAYHAVTPNETQQQLVALNTQIESEKQQLTEHQALLQADKRRQQDNEA 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITL---------QPLDDIQPWLDAQDEHERQLRLLS 616 + L+ AL QW+ Q L D++ L Q + L Sbjct: 661 TQKQLQVQLDALNTQWRQACKQALTPELAKTHLAVEQCLLDLRNQLTVQQTITSEFTQLE 720 Query: 617 QRHELQ-----------------------------GQIAAHNQQIIQYQQQIEQRQQLLL 647 ++H+ Q+ + + +Q+IEQ+ Q L Sbjct: 721 RQHQEAKNHYYEQQAQTKQLLSELSLLDEKLKYHSQQLDENQAEQHALKQRIEQQTQQLA 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 T+L+ + LTLP +++ SWL +Q Q ++ ++ I+ L + Sbjct: 781 TSLSPFNLTLPSQEQFSSWLKEIEQRGQYYEAQKTAAQQFAKSIEVHAATLAAETTYAQQ 840 Query: 708 PHCEETVVLENWRQVHEQC----------------------------------------- 726 + +++ Q+++Q Sbjct: 841 IERQLASQQQHFEQLNQQIGHANTQRQNMLDGQAITVFTQNMQVQQAQYARKVDELTLQI 900 Query: 727 -------LALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 AL Q L +Q Q AQAQF AL+ S FD Q+ FL AL+ + Sbjct: 901 SEIDKHIAALTGSAQELDEQLKQLNQRQSVAQAQFIDALKNSPFDTQEQFLNALLPAEEK 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QLEQLKQ + Q+ +A+T ++ +LA H+Q R + L ++E IQ L + K+ Sbjct: 961 IQLEQLKQQVTQQQLEAETRYQESLLSLANHEQQRLVEFAEL--SLEHIQHVLTELDNKI 1018 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 +E QG+I QL++D R QQ+ L+ +I Q +DW YLNSLIGS EGDKFR++A Sbjct: 1019 KELNQQQGQIINQLERDQQQRHQQRELLNKIEQSQLSYDDWSYLNSLIGSAEGDKFRRYA 1078 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD LV LANQQL +LHGRYLLQR LE++V+D WQAD++RD +TLSGGESFLV Sbjct: 1079 QGLTLDCLVSLANQQLDKLHGRYLLQRSHLANLELQVIDGWQADSIRDIKTLSGGESFLV 1138 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL+LALALSD+VSH+T+++SLFLDEGFGTLD+ETLD ALDAL++LNASGKTIGVISHVEA Sbjct: 1139 SLSLALALSDMVSHRTQLESLFLDEGFGTLDAETLDIALDALESLNASGKTIGVISHVEA 1198 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERIPVQI VKK NGLGYS+L S + V Sbjct: 1199 MKERIPVQITVKKANGLGYSELSSHYRV 1226 >UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE Length = 1233 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 481/1228 (39%), Positives = 642/1228 (52%), Gaps = 182/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSL+GEWKIDF+ PF +GLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA N+PDG LQ R ELAR Sbjct: 61 LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAIRAELARLD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL DK+ DKL+ A LTGLD+GRFT+SM+LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGEFAAFLNADAGKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S VF + K A+++L+ L+ +A+GV LL+ Q ++L ASL +E+ L Sbjct: 181 IYGRLSEAVFARFKQAKSDLDALRERAAGVELLSDAQREALQASLTHAQTQEQALRAQLT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q QQ WL RQ E +Q S+ Q QA QPQL L+ A+PA LRP+++ + Sbjct: 241 QAQQQQAWLRRQQEQRQALSQAQTQAAQAEQHWLALQPQLLRLTHAEPALRLRPYYQSLT 300 Query: 301 EHSAALAH----------------------------------------------IRQQIE 314 + L I +++ Sbjct: 301 QAEEDLRQADAQQHQLEARLQAAAAQRAPLQQALQQAQQAWQQLRQRRDETQALIAERVL 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ L + + +LQ Q + + RQ + Q Sbjct: 361 PLDNALSKQEEAEQRLSQQWQESQRQLQDLQAQQQQLSAQQEAQRQQHAALQRQLDAARQ 420 Query: 375 QTSDREHLRQWQ------------------------QQLTHAEQKLNALAAITLTLTADE 410 E L +WQ Q++ H ++ +A L L DE Sbjct: 421 HAQWGERLPRWQMLLERRGVLSDDGLRLSAERTRLQQEIQHLCRQRDARQETLLGLQQDE 480 Query: 411 VATALAQHAEQRPLR------------QHLVALHGQIVPQQKRLAQLQVAIQNVT--QEQ 456 A ++ L+ Q L +Q+ +A +A+Q + Q Sbjct: 481 QRLRQALETQEAELQAWQRHHPAEHVTQARTTLQQGDDDRQQLIALQPLALQEMARIQAL 540 Query: 457 TQRNAALN-----------EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 R+ AL E R++Y +K Q L D++ + R+ +LE +RA L+ G+P Sbjct: 541 QARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRLISLETERASLREGEP 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCG+ HP +YQ +Q R L EV++LG EG L + Q + E+ Sbjct: 601 CPLCGACDHPLAASYQPPALSDSQRRRDRLSQEVERLGREGGALSERAAQAAAQCAQLES 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDD--IQPWLDAQDEHERQLR-LLSQRHELQ 622 EAQ L+Q +WQ + +L + L D+ + +L + R+L L +Q L Sbjct: 661 EAQQLQQTLTQQRARWQQICDALGLALALEDETALADYLQRCAQRRRELDSLQAQGEALA 720 Query: 623 GQIAAHNQQIIQYQQQIEQRQ-----------------------------------QLLL 647 ++ + Q ++ Q Q Q + Sbjct: 721 QRLQRARDALTQASGRLSQEQHAQSLLLQTLQTQETRRAECERQWQQTEQEQQSLTQQIA 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR----------------- 690 L LT P + E WLA R+ E Q WQQ Q + LQ + Sbjct: 781 DDLADGELTAPDAAQSERWLAARRDEWQRWQQAQAQHQQLQTQALSLEQQLRLLQQQLTT 840 Query: 691 ----IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 + LT +TL + L + +L+ Q LH +Q Q+Q A+S Sbjct: 841 QTQHHETLTRERQTLDEQLALLLAQRRALLDGRPIADVQAELLHQEQALEQRQSAALAES 900 Query: 747 LQKAQ---------------------------AQFDTALQASVFDDQQAFLAALMDEQTL 779 + Q ++ +AL S F D A LAA++ E+ Sbjct: 901 QRWQQQYERLEGELSAARQQQQTLTQRLLPLRQRWQSALADSPFSDDAALLAAMLTEEEQ 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QL L+ + + QR+Q+ L+ Q + +AQ + RP + L + ++Q + Q+L Sbjct: 961 RQLTALRDDAQRQRQQSAALLAQAQQAVAQGEATRPQE-LHIDDDDPWLEQRCSALTQQL 1019 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 R+++ QGE++QQL D R QQ + +IAQ + +DW YLN LIGS GDKFRKFA Sbjct: 1020 RQHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQRERAYQDWSYLNQLIGSSSGDKFRKFA 1079 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LV+LAN+QL RLHGRY L R+ + LE+EVVDTWQADA RDTRTLSGGESFLV Sbjct: 1080 QGLTLDHLVYLANRQLMRLHGRYQLLRREGDTLELEVVDTWQADARRDTRTLSGGESFLV 1139 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL+LALALSDLVSHKTRIDSLFLDEGFGTLD+ETLDTALDALD LNASGKTIGVISHVEA Sbjct: 1140 SLSLALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHVEA 1199 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERIP+QI+VKKINGLG+S+L+S + V Sbjct: 1200 MKERIPLQIRVKKINGLGFSRLDSRYRV 1227 >UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH Length = 1241 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 437/1230 (35%), Positives = 598/1230 (48%), Gaps = 186/1230 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLKGEWKI+F +EPF SNGLFAITGPTGAGKTTLLDAI LALYH TPR Sbjct: 1 MKILSLRFKNINSLKGEWKINFDQEPFVSNGLFAITGPTGAGKTTLLDAISLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 L V+QSQN+LMTR TAECLAEVEFEVKG AYRAFW Q RA + +GNLQ P+ ELA+ Sbjct: 61 LDKVTQSQNELMTRHTAECLAEVEFEVKGVAYRAFWEQRRANYKEEGNLQAPQAELAKIN 120 Query: 120 ---ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + K+LA+K+ E ++TGLD+ RFT+SMLLSQGQFAAFLNA K RAELLEEL Sbjct: 121 RLGGEDKVLANKISQVKEKIISITGLDFDRFTKSMLLSQGQFAAFLNADDKSRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGT+IY IS +F+ + L L+ QA + LL Q L + + +L Sbjct: 181 TGTDIYRHISQTIFKHWREEEQALNTLKQQAQMMALLDATTRQELLTQQANIQTQITRLQ 240 Query: 237 TAQQQ-------EQQSLNWLTRQDELQQEASRRQQAL----------------------- 266 QQ+ ++++L +Q Q QQAL Sbjct: 241 KEQQEYQVAKQWQEKALEIQQQQQSAQAGLYEAQQALIIAQPDIQRLEKNEPAEKIRPLY 300 Query: 267 ---QQALAEEEKAQPQLAALSLAQPARN---------------------------LRPHW 296 + L E+ QL +L + A L+ Sbjct: 301 DEKNRRLTEQNYLATQLTSLKTEKQAIEQQSLPINKKLAAFHEQLKTHHEKKQHTLQLIR 360 Query: 297 ERIAEHSAALAHIRQQIEEVNT---RLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 E++ L ++Q+I N +L+ A A K+ QQQ LN L Sbjct: 361 EKVLPLDNQLVLLQQEISTNNQHKHKLEKICAEYLQHSQLAEKKLITTQQQVNQLNNDLT 420 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA----- 408 +H Q W+ F Q Q++ T ++K+ +L T Sbjct: 421 QHAYHAQLAENLPLWQHYFQQYNEISNQYLANQKRETAEQEKVISLEKALQQATQTLATQ 480 Query: 409 ---------------------------DEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 DE+ L Q Q+ ++ LH Q+ K Sbjct: 481 QEQLNLQQQQLQSYQTQLEARQKADKPDEIKPRLQQINLQKNALAKIINLHTQLQRNGKE 540 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 Q + Q+ + E KEK Q L D+ ++ E +RA+L Sbjct: 541 QQHYQTTLSENQQKIATLTQTIAENDLALKEKAQHLKDLNDNYLLLQKVAEYEQERARLL 600 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 +PCPLCGST HP VE Y ++P + RL AL+ +V L A R QL Q Sbjct: 601 KDKPCPLCGSTQHPYVETYHDIKPDETKLRLEALQQQVHSLTITLAEQRTQLVNYGSQNS 660 Query: 562 RDENEAQSLRQDEQALTQQWQAVTAS-----------LNITLQPLDDIQPWLDAQDEHER 610 + L Q+ LTQQWQ + + L Q L+ + L + + + Sbjct: 661 TLSDNIAQLTQENSVLTQQWQTLAQAHHLPLVDDADNLLTLEQSLNQQELILTEKLDSYQ 720 Query: 611 QLRLLSQRHE--------------------------LQGQIAAHNQQIIQYQQQIEQRQQ 644 QL + + LQ I + QQ QQ +Q Q Sbjct: 721 QLEAQTHQKNTHFLNAKEQFNQQQQSVKQQQNDLDYLQKTIKTYQQQSEHLHQQQQQLAQ 780 Query: 645 LLLTTLTGYALTLPQEDEEESWLA----------------------------TRQQEAQS 676 + + + TLP+ ++ WLA T+ ++ + Sbjct: 781 HIQSAIEKQGYTLPEFEQFTPWLAARQQEHQQYQSQLKELQLLQQSLREQQVTQNEKKRY 840 Query: 677 WQQRQNELTALQNRI--------------------QQLTPILETLPQSDELPHCEETVVL 716 ++Q EL AL ++ Q + + L + + + Sbjct: 841 LAEKQAELEALLAKLSQQQHQQTQWQDQRQALFGSQSVEQVRSELDKHSQFLQTQIEQYT 900 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + Q+ + L Q Q ++ A Q+A + AL+ S+F D+ FLA+L+ Sbjct: 901 QEKNQLENRLNQLIGQYQENEKALQRAITQAQQATEHYQHALKESLFADENDFLASLLSV 960 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + T+L++ ++ ++ Q +T + + A Q L+ T EQ L Sbjct: 961 EERTRLQEQQKQRLDKLLQEKTRLE--TQEKAYQQHLLQQPLLSTQCTAEQCNIHLDDLA 1018 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 ++ + + ++ QL+QD + R +QQTL+ QIA+ +DW YLN L+GS GDKF Sbjct: 1019 KQHKALQETLFSLQIQLRQDDEKRIEQQTLLAQIAKQQAHYDDWSYLNELVGSASGDKFS 1078 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 +FAQGLTLD+L++LAN++L +LHGRY LQRK + +LE+++ DTWQADA+RDTRTLSGGES Sbjct: 1079 RFAQGLTLDHLIYLANRRLEKLHGRYFLQRKTTGSLELQIADTWQADALRDTRTLSGGES 1138 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSL+LALALSDLVS+KT+I+SLFLDEGFGTLD +TLD ALDALD+LNASGK IGVISH Sbjct: 1139 FLVSLSLALALSDLVSNKTQIESLFLDEGFGTLDPDTLDIALDALDSLNASGKIIGVISH 1198 Query: 1017 VEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 VEAMKERIPVQIKVKK GLG S+L F Sbjct: 1199 VEAMKERIPVQIKVKKAGGLGISQLAPEFR 1228 >UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6W2_PROST Length = 1225 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 456/1231 (37%), Positives = 615/1231 (49%), Gaps = 189/1231 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT+EPFAS GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S QN+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+P+G LQ P+ ELA + Sbjct: 61 LSTLSVKQNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRASNKPEGKLQPPKAELATVS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKI+A+KV D E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGKIIAEKVSDIREQIVQITGLDFGRFTKSILLSQGDFAAFLNASEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS---------------- 224 IY QIS+ ++ QHK + +LE L+A+A + LLT + Q+L Sbjct: 181 IYSQISSYIYRQHKQVKNDLEILKARAQSIHLLTESEHQALIEQQTVLADQERQLNQKRT 240 Query: 225 -----------LQVLTDEEKQLITAQQQEQQSLN-------------------------- 247 Q LT QL QQQ +++ Sbjct: 241 QNQQALYWQQRQQQLTARLHQLELDQQQAEKAYQDAEPQFKKLSDNLPAENLRPLWQDVE 300 Query: 248 -WLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA-------------RNLR 293 +EL ++ Q + + Q QLA + ++R Sbjct: 301 RQQQALNELLEKQQSLSQQCENNTQQLTPLQAQLAQVQHEHSQHQNYVQQQTVLIDTHVR 360 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 P I + I +Q E+ +T QS +L +H A ELQQ + +LQ Sbjct: 361 PLDNAILHLHQQIKEISEQKEQYHTEYQSKHSLITRTQHQAHLDREELQQ----IEHYLQ 416 Query: 354 EHDRFRQWNNEPAGWRAQ----------------------------FSQQTSDREHLRQW 385 +H + + WR Q S+Q E Q Sbjct: 417 QHPQDAAITQQIGLWRQQGQFIDELSQKVQALEQKQQLLQQEQSALVSEQQQQIEQNAQT 476 Query: 386 QQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG----QIVPQQKR 441 Q QL + + L + L Q EQ R L Q QQ + Sbjct: 477 QHQLEQDTAAYQLVESRYLEWQEKQDIEQLNQSIEQLHTRSQHAQLLPLLLSQWQEQQNQ 536 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 L Q + +TQ +Q L + L D+ E +I +LE +R QL Sbjct: 537 LKIKQHQQEELTQSISQAEKQLQLTETQITHLQPHLTDLNARLRLEQKIVSLEKERQQLI 596 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLD------- 554 AG+PCPLCGST HPA+E YQ++EP + RL+AL ++++L + T + L Sbjct: 597 AGEPCPLCGSTEHPAIEQYQSVEPTQTEQRLIALTKQLEELKQTQVTQQSLLQREMQRQA 656 Query: 555 --------------------------AITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 A+ +L + L D Q + Q + Sbjct: 657 ENQQAQQQLIAQERQLRTQWMTACQKALAPELTTTHAAVEQLLTDIQKQLSEKQQSLQAF 716 Query: 589 NITLQPLDDIQPWLDAQD----EHERQLRLLSQRHELQGQIAAHNQ-------------- 630 + ++ L Q + + L LL++R + Q Q+ Q Sbjct: 717 TALEREYQQLKHRLHEQQSLNKQQQSSLALLTERIKHQHQLIDETQKEHVVHQQRHNQQQ 776 Query: 631 --------------------------QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE 664 Q Q +Q Q + + TL E ++ Sbjct: 777 QQLHEALAEFRLPESESFEPWFTLLEQRGQLYAAKKQSAQDISQKIAVAEATLQVELAQQ 836 Query: 665 SWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHE 724 + L+ R + Q Q+ + + +QL +++ Q ++ + +Q++E Sbjct: 837 THLSKRLENTQQQLQQLQQQVEQKQAARQLLLDGQSISQFMGRLQDQQNKLAHQQQQLNE 896 Query: 725 QCLALHSQQQTLQQQDVLAAQSLQK-------AQAQFDTALQASVFDDQQAFLAALMDEQ 777 Q +L+ +++K AQ +F+ AL S F QQAFLAAL+ Sbjct: 897 QVTHHEKHLASLKGSLNEVITTIEKTRYQLTTAQQRFEHALSTSPFATQQAFLAALLAPD 956 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 QLEQL+Q L R QAQT + +H +PDD + ++E+ QQ + Q + Sbjct: 957 EKLQLEQLQQRLLQSRLQAQTRYKEGERARQEHLAQKPDDH--IEASLEEWQQAIIQLDE 1014 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 +++ QG+I QL+ D R QQ+ L+Q+I Q EDWGYL LIGS EGDKFR+ Sbjct: 1015 EIKNLNKQQGQIFSQLEADKQQRHQQRGLLQEIEQSQSHYEDWGYLCELIGSAEGDKFRR 1074 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 +AQGLT D L+ LAN +L +LHGRYLL+R + LE++V+D WQAD +RD +TLSGGESF Sbjct: 1075 YAQGLTFDCLISLANLRLDKLHGRYLLKRNHNADLELQVIDGWQADTIRDIKTLSGGESF 1134 Query: 958 LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 LVSLALALALSD+VS+KT+++SLFLDEGFGTLD ETLD ALDAL++LNASGKTIGVISHV Sbjct: 1135 LVSLALALALSDMVSNKTQLESLFLDEGFGTLDPETLDIALDALESLNASGKTIGVISHV 1194 Query: 1018 EAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 EAMKERI VQI VKK NG G+S+L S + ++ Sbjct: 1195 EAMKERISVQIPVKKTNGFGFSELPSRYRIR 1225 >UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C536_9GAMM Length = 1232 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 449/1228 (36%), Positives = 624/1228 (50%), Gaps = 182/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSLKGEWKIDFT+ PFA+NGLFAITGPTGAGKTTLLDAIC+ALYH TPR Sbjct: 1 MRILSLRFKNINSLKGEWKIDFTQPPFANNGLFAITGPTGAGKTTLLDAICMALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ +S++ N+LMTR TAE LAEVEFEVKG+ YRAFWSQ R+R +GNLQ +VELA+ + Sbjct: 61 LNAISKTSNELMTRGTAESLAEVEFEVKGQGYRAFWSQRRSRGSSEGNLQEAKVELAKIS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG ILA ++K K + ++TGLD+ RFT+SM+LSQGQFAAFLNA P ERAELLEELTGTE Sbjct: 121 DGSILASQIKQKNQQIESITGLDFARFTKSMMLSQGQFAAFLNADPNERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ-------SLTASLQVLTDEEK 233 IYG IS V + A+ L +L+AQA GV LL+ E + LT +LQ E+ Sbjct: 181 IYGLISEQVHIEFSQAKQALAELKAQAQGVELLSEEALATYKSQQSELTLTLQNAEAEQT 240 Query: 234 QLITAQ---QQEQQSLNWLTRQD----ELQQEASRRQQAL-------------------- 266 L T +Q QQ+ + LT + +Q Q L Sbjct: 241 TLQTQLTWLKQYQQAQSVLTDLQLQVTKAEQALLEHQSQLTRLSNSEPAELLRPAYQVYQ 300 Query: 267 ----------------------QQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSA 304 QQ + ++ Q A + L + + + + + E Sbjct: 301 DHKNQADKLIAQLASLESVTAKQQLAVQLQQTQHDEAKIRLLELQQQQQQQDKLLNEEVI 360 Query: 305 ALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL-------NTWLQEHDR 357 L + I T+ Q+ + + + LQ QQQ++ + +L H Sbjct: 361 PLDLELKSIVSDLTQNQTDLEQYIKQHNQLNTDTEALQAQQQNIVEKLAQCDKYLALHHA 420 Query: 358 FRQWNNEPAGWRAQFSQQTSDRE-------HLRQWQQQLTHAEQKLNALAAITLTLTADE 410 Q + W+ Q Q ++ E + + Q QL ++ A T Sbjct: 421 DEQLASLLPRWQDQLQQVVANHELLADKSARINEQQLQLNKVVEQAKQAATELTIATQTH 480 Query: 411 VATALAQHAEQRPLRQHLVA-------------------------LHGQIVPQQKRLAQL 445 Q ++Q+ L L + ++ + QL Sbjct: 481 SQNEQKQLSQQQALEHLLGQHTVASLQDSVQNMQQQQILSQQLPPILQRLKRCLAQKQQL 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 ++I+ T + Q + L ++R YK + +Q+ ++ + QE +I R QLQ Q Sbjct: 541 SISIEQATAQTAQCDQQLQQLRTTYKLQREQINLLEQLQRQEQQIADFTQARLQLQPDQA 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGS HP + Y+AL+ +NQS+L + ++ ++ ++ ++ Q + Sbjct: 601 CPLCGSCEHPLINEYRALDVNINQSKLNQAKQQLAEIEQQANQIKEQKAVAVAMHLQHAE 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ-------------------------- 599 + L D + L Q W + SL + L D++Q Sbjct: 661 QYTQLITDIEQLQQNWHQINQSLALNLLWDDEVQLTEYLAQQQQALMSSKTLITQAQQFE 720 Query: 600 -----PWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ-------LLL 647 L+ Q E+ + Q L+ I + I Q +IE+ QQ L Sbjct: 721 SALKQSLLNTQASFEKVKDIKHQHALLEQTITQQHAAITQQGTEIEKNQQLLHKQSTQLS 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEA--------------QSWQQRQNELTALQNRIQQ 693 + L L LP E E+W + + + Q+ Q ++T ++ Q Sbjct: 781 SELDKLGLVLPDLAEIETWYNHQHAKVAQWQQQQMQKKTLTDNQQKIQLQVTEKTTQLHQ 840 Query: 694 LTPILETLPQ------SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 LT +L+ + + + L ++V A+ Q QQ +L Sbjct: 841 LTKLLDDYSSKIAQQMASQAQLQHKRQALFGEQKVETARSAMTQHVQQSQQLFDEQVNAL 900 Query: 748 QKAQAQFDTA----------------------------LQASVFDDQQAFLAALMDEQTL 779 + Q+ +A L SVF D +FLAAL+ + Sbjct: 901 NQLTQQWQSAQGEQKGLQQQLLQLQSDTLAHQTYWNEVLSNSVFADLDSFLAALLPQDQK 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QL+QLKQ+L+ ++ +A L+TQ T QH + +Q+ ++L QK Sbjct: 961 QQLQQLKQDLQTEQTKAVALLTQANNTFEQHLLDAQSPTW-CDLDWQQLSEQLHHIQQKE 1019 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 RE G+I+Q L+ D R Q L ++IA + +D YL+ LIGS++GDKFRKFA Sbjct: 1020 RELVEQTGQIKQALQDDQKRRLNQTHLFEKIALCQIEYDDLAYLHGLIGSQKGDKFRKFA 1079 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LV+LAN+QL RLHGRYLL+RK SEALE++V+DTWQ D+VRDT+TLSGGESFLV Sbjct: 1080 QGLTLDHLVYLANKQLARLHGRYLLERKPSEALELQVLDTWQGDSVRDTKTLSGGESFLV 1139 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALALALSDLVSHKT IDSLFLDEGFGTLD ETLD ALDALD L+ASGKTIGVISH++A Sbjct: 1140 SLALALALSDLVSHKTSIDSLFLDEGFGTLDRETLDMALDALDNLHASGKTIGVISHIDA 1199 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERI VQI+VKK NGLGYS+L +A Sbjct: 1200 MKERIAVQIEVKKQNGLGYSRLAPQYAF 1227 >UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FM95_METHJ Length = 1219 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 308/1220 (25%), Positives = 535/1220 (43%), Gaps = 186/1220 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L+ NLNSL G+W IDF+ F S+G+F ITGPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MKILQLKFSNLNSLAGDWTIDFSNPAFTSSGIFLITGPTGSGKTTVLDAICLALYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+++ N +MTR T EC AEV FE + + W+Q RA+N+PDG LQ P+ E++R Sbjct: 61 LGKVTKTNNHIMTRHTGECSAEVVFESQKGRFVCHWNQRRAKNKPDGELQPPQHEISRAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +ILA K+ E+ +TG+DY +FTRS+LL+QG FAAFL A ERA +LE++TGT Sbjct: 121 TKEILASKINQVQEIVKEVTGMDYDQFTRSILLAQGGFAAFLQAGADERAPILEQITGTA 180 Query: 181 IYGQISAMVF-------------------------EQHKSARTELEKLQAQASGVTLLTP 215 IY ++S + E+ +S ++E+L+ A+G ++ Sbjct: 181 IYSKLSEKTYERYTSEREKLEQVTRECDLISILSPEEKESIEQQIEELRKAAAGKDVMII 240 Query: 216 ---------EQVQSLTASLQVLTDEEKQLITAQQQ-----------------------EQ 243 E ++ L + + L + K L + + Sbjct: 241 RTNEAIQWIETLEKLRSEIDGLETDAKHLDEKKAAFEPSRIALLAAQKAASFQGLYAPLE 300 Query: 244 QSLNWLTRQDELQQEASR------------------RQQALQQALAEEEKAQPQLAALS- 284 L + +E +R + + QA E E+ + + Sbjct: 301 LKRETLQKDTRQYEETARMRDSLKASLPDVESLVLSAKTEMDQAEREREEGYVLINEIRT 360 Query: 285 ----LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 + + L E + LA + E + Q+ + ++ + + + + Sbjct: 361 LDKQIREKESELYKKKEELKGLQDLLAGYTSEQELAEKKQQTILREKSDAARYIDQNARD 420 Query: 341 ------LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL----RQWQQQLT 390 ++ ++ L E + N + + + + D E L + QQ L Sbjct: 421 AVIRDIYSGTEEKIHQILNEMKTIGRLNKDCSEQKRLVHSKRQDLEDLKKDREKKQQALQ 480 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 E + + + L Q + + +R + +I+ ++ ++ + A+ Sbjct: 481 VLEDQQKIREGELEKILSGTTIGELRQRRDDKKVRIEHLNRLKEILTGKREISANKEALS 540 Query: 451 NVTQEQTQRNA----ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 + + K + + L +T A+++ L +R QL G+PC Sbjct: 541 LKRDDLIHYLQSSGYEKERLGSDLKHREELLTTKRTAAFLAAKVRDLATERNQLVDGEPC 600 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 PLCGS HP V Q ++P S + E ++K L E +L + +L+R + Sbjct: 601 PLCGSLHHPFVTE-QEIKPDEIISDFVEEEKKIKDLTRELTSLTAIIAEKEGELKRCTED 659 Query: 567 AQSLRQDEQALTQQWQA---------------VTASLNITLQPLDDIQPWLDAQDEHERQ 611 L + W+ + + + L ++ L ++++ Q Sbjct: 660 ITECDAQLNELNRAWKEGAELHGIHAETDERTLESCIKSAASELGSLEATLRTAEQYDEQ 719 Query: 612 LR---------------LLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT------- 649 ++ L E + +I + +I + Q+ I + + T+ Sbjct: 720 IKKASPLISTNRETLISLEKNYREKEFEIISGETRIGEIQELIAASESKISTSFLELQPV 779 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS----- 704 L ++ Q+ + L T + + +Q++++ + + + +Q+L L L Sbjct: 780 LADLGCSINQDTNMPALLLTLKNRQKRFQEQEDRIKSCEVGLQELHAKLSGLIARISEKT 839 Query: 705 -----------------------------DELPHCEETVVLENWRQVHE----------- 724 ++ CEE + E ++ E Sbjct: 840 NEITRTHEAIKEKELTLHALKNERNNKFGEKDTDCEEKRLAEAVKKASEIFETRQKEKND 899 Query: 725 ---QCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ 781 + +L L+++ A Q + + +F + ++ + F D++A+ +ALM ++ + + Sbjct: 900 LSNRLQSLEGLLSDLEKRISEAQQDISSSLDEFLSHIRQAGFQDEEAYTSALMKQEEMVR 959 Query: 782 LEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE 841 LE++ +++ + + + + Q+ AL ++ +L + ++ Sbjct: 960 LEKVWEDIRTEETRIRERKISAETRYVEEQKKNLTTKPALD-----LKADLEELQKQKDL 1014 Query: 842 NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG 901 G+ +++L + + +QQ+ + ++V W LN LIGS +G KFR FAQG Sbjct: 1015 YIADIGKNQEKLIRHEEMVRQQREKIAIRDARQREVNKWHRLNELIGSADGKKFRVFAQG 1074 Query: 902 LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL 961 LT L+ ANQ L R+ RY+L + L+++V+DTWQ VR + LSGGE F+VSL Sbjct: 1075 LTFCILLSHANQHLQRMTDRYILIQDKDLPLDMQVIDTWQGGVVRSVKNLSGGEIFMVSL 1134 Query: 962 ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 ALAL LS + S R+DSLFLDEGFGTLD + L+TAL L L GK IGVISHV A+K Sbjct: 1135 ALALGLSHMASQNVRVDSLFLDEGFGTLDDDALETALSTLSGLEQEGKLIGVISHVSALK 1194 Query: 1022 ERIPVQIKVKKINGLGYSKL 1041 ERIPV+I ++K + G S + Sbjct: 1195 ERIPVRISIEKGS-NGRSTI 1213 >UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA3_FIBSS Length = 1182 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 285/1184 (24%), Positives = 493/1184 (41%), Gaps = 158/1184 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI + N+NSL GEW IDF FA+NG+F I GPTG+GKT++LDAICL LY +TPR Sbjct: 1 MKIKKIEFCNINSLAGEWTIDFESPDFANNGMFCIAGPTGSGKTSILDAICLGLYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L + N++MT DT C A+V FE KG Y + WSQ R+ ++ Sbjct: 61 LGAIKGDSNEVMTYDTLSCYAKVTFECKGVVYSSCWSQRRSAKTKKLQKYAWVLKNETTQ 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + + + + GLD+G+FT+SM+L+QG+F FL ERA +LE+LTG Sbjct: 121 NVDVSSSNQTEIEATMTRVIGLDFGQFTKSMMLAQGEFNRFLKCSENERAAILEKLTGDG 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +I+ V + + A ++ ++ + VT+L+ E++ L A ++ T ++K L + Sbjct: 181 IYRKIAVAVHDLYACANRAVQDIENRLGDVTMLSEEELAELNAKIEEATAQKKALNENVE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + W ++ + ++ L++A + +P L A A+ + + Sbjct: 241 RLLYICTWFETLHNIESHLNTAKEGLEKAERAKADFEPDREKLERAVRAQEVESSYAEYN 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL-------- 352 L ++ Q+E+ +L + + + + L++++ + Sbjct: 301 SVRDNLGRMKDQLEKSKGKLPEAESNLERATNDNSVKQEALEKRKAEYSAGETLWEQVSA 360 Query: 353 ------QEHDRFRQWNNEPAGWRAQFSQ-QTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 H + + +++ A + S QT +E + + T ++ +A Sbjct: 361 LDGDIRNSHTQLKGLDDDAAKIATEISSTQTKIKEFDNRISENETALKKVETYIAENGND 420 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR-LAQLQVAIQNVTQEQTQRNAALN 464 D + L A +R V+ Q + QK+ L + A + QE LN Sbjct: 421 EKIDGLLPLLKALASERTQEWTSVSKESQQLDDQKKALQKFDEACEQQKQELGALRDYLN 480 Query: 465 E-----------------------------------------MRQRYKEKTQQLADVKTI 483 E + E+ + LA++ T+ Sbjct: 481 EHQIDAELVNLLPEMNGYANDVDRHHKESVRLQGEISSRQKSLDGVISEREKALANLTTL 540 Query: 484 CEQEARIKT------LEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 ++ I + R L+ G+PCP+CGS H + E +E G + RL Sbjct: 541 QNEKESIIQEDIPVVVAELRHTLKPGEPCPVCGSREHLSCEDSAKVENGAD--RLNDFAA 598 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 +++K+ E ++ LD Q Q E + +R+ Q ++ A T+SL + L+ Sbjct: 599 KLRKINGEMEKVQRALDGFATQQQNFE---ELIRESSQKAKEEADAETSSLELLNSKLEP 655 Query: 598 IQPWLDAQDEHERQLRLLS-----------------------------QRHELQGQIAAH 628 + + + +R + QR EL G ++ Sbjct: 656 WKNSANFEKATFESVRGILQNLQSLKTTYLQKKESADGLQNNVNNAAIQRAELVGTLSRI 715 Query: 629 NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ 688 + + + Q ++++ + L + L + + + ++ ++ LA +++ W + Q + LQ Sbjct: 716 EESLKKAQDKMQELSKELESKLEPWFSNI-RMEDLDALLAELEKKNGLWNKAQEKQVKLQ 774 Query: 689 NRIQQLTPILETLPQS-------------------------------------------- 704 ++ + L ++ Sbjct: 775 GELETFRSNVSQLNENLGLTQSRLDEAKRKIEESRGNLATLENRRKELFGEKSVEEERNK 834 Query: 705 ----DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 E E +Q+ E +AL L A L + Q F L Sbjct: 835 ARTSRETAEREADSARRLEQQMREAKIALDKSIADLNGHIADAEPKLAELQKLFLENLTL 894 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 F D+Q FLA+ + E L Q ++ +++ AQT V + LA+HQQ R Sbjct: 895 KSFADEQEFLASKLPESDRKALLQKQKLVDDNLTTAQTSVKNFNDQLAEHQQKR-----N 949 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 T + +Q KL E T + +Q K DA NRQ+ + +++ ++ + DW Sbjct: 950 FEETEDVAKQNRDTAKSKLNECTVNLATWTEQKKTDALNRQKFSDMQEKLVELKSKRSDW 1009 Query: 881 GYLNSLIGSK-----EGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 + GD F KF Q +TL NL+ +AN L + RY + + + L ++ Sbjct: 1010 EQMQRWFNGNRLETGNGDVFVKFIQTITLRNLLKIANGYLHDMFPRYEMVTEEN-TLNIQ 1068 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 +VD +DAVR +SGGE FLVSL+LAL +S L S IDS+FLDEGFGTLD++ L Sbjct: 1069 LVDHDNSDAVRPIDNISGGEGFLVSLSLALGISTLASRNVSIDSMFLDEGFGTLDTKMLQ 1128 Query: 996 TALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 + L + GK +GVI+HV+ +K + I+V G + Sbjct: 1129 ETVVVLQKMQQEKGKLLGVITHVDVVKSELRTHIEVTHNGGRSF 1172 >UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum RepID=Q8KDA7_CHLTE Length = 1222 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 326/1224 (26%), Positives = 526/1224 (42%), Gaps = 190/1224 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I LR NLNSL+GEW+IDFTR + S+GLFAITGPTG+GK+T+LDAICL LY +TPR Sbjct: 1 MIIQKLRFANLNSLQGEWEIDFTRPEYLSDGLFAITGPTGSGKSTILDAICLGLYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M R + +C AEV F AYR WSQ+R+R++ G LQ + E++ Sbjct: 61 LGRITKSSNEIMARHSGDCFAEVTFATASGAYRCHWSQHRSRHKRGGELQSQKHEISDAV 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ++ K+++ L+ TG+D+ RFTRSMLL+QG F AFL A +RA +LE++TGT+ Sbjct: 121 TGALIQTKLQETLQEVEARTGMDFDRFTRSMLLAQGAFTAFLQADADQRAPVLEQITGTK 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS---------------- 224 IY IS V E+ + LE+LQ + G+ LL E+ ++L Sbjct: 181 IYSVISMKVHERRRDELARLERLQLECEGIRLLGDEERRALETERAECIEKERELNAGVE 240 Query: 225 ------------------LQVLTDEEKQLITAQQQEQQSLNWLT---------------- 250 L + E L ++ + L Sbjct: 241 TESAAQRWLQEIARLEAALAAIGSEAAALDAEREAFRTDEERLRLARSAAAVEPQYAVLK 300 Query: 251 --------RQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPHWERIAE 301 +EL + + R + Q+ L E + + AL+ AQ + RP ++ + Sbjct: 301 LKRAQLRRDSEELAAKEAGRPKMEQRWLEAEAQHEATEKALASAQESVTSARPLIAQVRQ 360 Query: 302 HSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ---QSLNTWLQEHDRF 358 A + RQ+ E L++ R + A SA ++ + Q L W EH Sbjct: 361 LDAVIEGKRQEAERRKRELEALEERRGRLDAERAAASASVESARNGLQKLRAWQTEHHAD 420 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 +G R F + E R + +Q + L + + A+ A Sbjct: 421 ASLVGALSGIRHAFDELHPAAERERAVASGIASVQQAIGQLRDEIAKIELESKASQAAFD 480 Query: 419 AEQRPLRQH--------------------------------LVALHGQIVPQQKRLAQLQ 446 ++ L + +VAL+ ++ +L Sbjct: 481 EARKALDERKASFTARLDGSTLKALRVELDLLRDRRHLLEEIVALYKSGKELLPKITELG 540 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 I+ + E+ L R+ ++ A + + R+++LE +R +L AGQPC Sbjct: 541 ANIETLESEEADATRKLEHARELLAHAEREAAAQENLARMADRVRSLEEERRRLVAGQPC 600 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 PLCGS HP VE + + P +++ L + V++ L + ++++ Sbjct: 601 PLCGSEHHPYVE--EQVLPESDEAALDVAKRAVQEYSRSVRELEISVAERRTEIEQMRQW 658 Query: 567 AQSLRQDEQALTQQWQAVTASLNIT----------LQPLDDIQPWLDAQDEHERQLRLLS 616 L + +Q A+ + L+ L + + ++ QL +L Sbjct: 659 RDDLAAMRETSGRQCLALLEKAGVEAPAKEAEPVVLENLAENKRKVEELAGRIEQLDVLE 718 Query: 617 QR-----HELQGQIAAHNQQIIQYQQ------------------------QIEQRQQLLL 647 QR LQ A + +Q ++ +R+QLL Sbjct: 719 QRIRDDEARLQQLNEAARSDKRRLEQAVDQQRVNRFDLDRLEREREAAQCELAERRQLLR 778 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT------------ 695 + Y + + ++ ES +A + +W++ + +L+ ++ Sbjct: 779 RLVEPYGVAVG-DEIAESLVAELEARRDAWRREEERGRSLEESLRIGEVSLRNVAEQIAA 837 Query: 696 ------------------------------------PILETLPQSDELPHCEETVVLENW 719 E L + E + Sbjct: 838 LDADLAMRREEVEAAFAGVETSKKERRELFGEKLPDAEEERLESLVQAARDRLAASSERF 897 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 + L + L++ + +++ +A+F AL F D+ AF+AA + E Sbjct: 898 NAARQALAVLDTSIAELRRAVEEEREEVERREAEFGAALAGKGFADEAAFVAACLPEAER 957 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 +LE +LE+++R + L + R T++ +++ + + +L Sbjct: 958 ERLESAATSLEHRKRDLDLKRSDREARLRDELERRLT-----TLSADELAVRIGELQAQL 1012 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 R+ G I +L+ + ++ M + + W L+SLIGS +G KFR FA Sbjct: 1013 RDVQGRVGAIASRLEAHRQAADEHRSKMAAVEAQKAECRRWEMLHSLIGSADGKKFRNFA 1072 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QG+T + ++ AN+QL R+ RY+L S ALE+ V+D WQA VR TR LSGGESF+V Sbjct: 1073 QGITFEIMIAHANKQLMRMTDRYVLLHDLSGALELSVIDQWQAGEVRSTRNLSGGESFIV 1132 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALAL LS + S +DSLFLDEGFGTLD E L+TAL L L SGK IG+ISHV A Sbjct: 1133 SLALALGLSQMSSRNVSVDSLFLDEGFGTLDEEALETALKTLGTLQQSGKLIGIISHVPA 1192 Query: 1020 MKERIPVQIKVKKINGLGYSKLES 1043 +++RI IKV + G G S +E Sbjct: 1193 LRDRIATHIKVTPLTG-GRSAIEG 1215 >UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYK7_9DELT Length = 1087 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 331/1086 (30%), Positives = 508/1086 (46%), Gaps = 56/1086 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LRLKNLNSL GEW+ID T +AS+G+FAITGPTGAGK+T+LDA+CLALY TPR Sbjct: 1 MQIRQLRLKNLNSLVGEWEIDLTHPDYASSGIFAITGPTGAGKSTILDALCLALYGTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q+ N++M+R T EC AE F YR WSQ+RAR +PDG LQ P+ ELA Sbjct: 61 LGKITQADNEIMSRQTGECFAEATFVTAAGRYRCHWSQHRARRKPDGKLQAPKHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ K + E T+TG+D+ RFTRSMLL+QG FAAFL A P +RA +LE++TGT Sbjct: 121 SGRIMESKQRGVAEQIETVTGMDFDRFTRSMLLAQGGFAAFLQADPDQRAPILEQITGTG 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V ++ + + +LE L+ Q +G+ LL E+ + L L + EK+L Sbjct: 181 IYSLISIKVHQRRGAEQRQLENLERQLTGIRLLPQEEEEQLQKELTAGQEREKELAEQIG 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++ WL L QE ++ + ++ + PQ L A A L +A Sbjct: 241 VGNRAIGWLDNLARLAQELAQNSRRQEELQQRRQAFAPQFTKLQRANQALELAGAHAALA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A R E L + A ++ + + Q+++ +L + R+ Sbjct: 301 ALRQAQQADRDNRESCRRALPALEAGCHQAQNELEQAEQQRQERKNNLQAAQPLLRQARE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + + T E L++ +L +QK L T EV L A Sbjct: 361 LDLQLRELAKPLKTTTEAIEELQRRLCELAE-DQKSTELKQQTANTKLQEVDRELTDTAA 419 Query: 421 QRPLRQHLVALHG----------QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + L +HL A+ + ++RL + Q Q Q ++ + + R+ Sbjct: 420 DQQLVEHLAAIEERFSDFAELSRRRQEHRQRLDEAQKRQQAAEQTWQRQQQQVQKNRRDL 479 Query: 471 KEKTQQLADVKTICEQ---------------------------EARIKTLEAQRAQLQAG 503 ++ Q+LA +Q ++E R QL+ Sbjct: 480 QQAEQELASKGEKLQQLLAGKELTAWRRELLTLKEAAVRRERFLESTHSMEQARGQLRPQ 539 Query: 504 QPCPLCGSTSHP----------AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 +PCPLCGS SHP LE +++ E A + L Sbjct: 540 EPCPLCGSRSHPFANGEIPDPDPQATAACERVTKLVDTAEELEKALQRQREAMAGCKDAL 599 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 + ++ Q + + +Q L ++ + + SL Q D + + E Sbjct: 600 NRRERESQSARYQLDNAQQTVTRLLEELRDLETSLQ---QQRDRLLARIAPYGIKELTPT 656 Query: 614 LLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQE 673 Q + Q Q + + Q+ L A Q E +Q+ Sbjct: 657 TWEQARRRLTERRDRWQTRQQEKNDLTQQLAGLKLRGEHLAEQHRQVLAERHKQQEHEQQ 716 Query: 674 AQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ 733 Q +++ ++ Q + L + E + + + ++ + ++ Sbjct: 717 LQQQRRQLSQKRQQLLGEQDPEREEQRLQHALEAAEKQVELARQALATARQEQEKVQTRS 776 Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 + L Q A+ L +++A+F L A+ F D+ +LAA + E +L++ Q L ++ Sbjct: 777 RELAQAIDQRAKLLAQSEAEFKKRLAAADFADEAEYLAANLPEDQRRRLQRQAQQLADEE 836 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL 853 + + L + Q + T E++Q +LA ++ R G ++Q+L Sbjct: 837 AALSAGHQEKSRQLQELQAQQIT-----TADKEELQAQLATLEEQRRTVQEQIGALKQKL 891 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQ 913 + + R+QQ+ +Q + Q+ W L+ LIGS +G KFR FAQGLT + +V AN Sbjct: 892 EDNRQLRRQQEQQVQLLEAQRQECARWELLHELIGSADGKKFRNFAQGLTFEVMVGQANH 951 Query: 914 QLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH 973 QL ++ RYLL R + LE+ VVD +QA +R TR LSGGESFLVSLALAL LS + S Sbjct: 952 QLKKMTDRYLLLRDPARPLELNVVDNYQAGEIRPTRNLSGGESFLVSLALALGLSRMASR 1011 Query: 974 KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI 1033 ++DSLFLDEGFGTLD E LD+AL+ L L GK IG+ISHV A+KERI +I+V Sbjct: 1012 NVQVDSLFLDEGFGTLDDEALDSALETLAGLQQDGKLIGIISHVPALKERIATRIRVVPQ 1071 Query: 1034 NGLGYS 1039 G S Sbjct: 1072 TGGRSS 1077 >UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB10_9GAMM Length = 968 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 306/1038 (29%), Positives = 457/1038 (44%), Gaps = 85/1038 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I ++RL NLN+L G W+ID ++ N ++A+TGPTGAGKTT+LDAI LALY TPR Sbjct: 1 MRIHTIRLANLNALTGTWEIDLDHPAYSDN-IYALTGPTGAGKTTILDAISLALYGRTPR 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ + ++ N++M+R + C AE+ F + YR+ WSQ+RAR + G LQ P+ ELA Sbjct: 60 LARIGKAGNEIMSRHSGTCHAEITFSTRTGRYRSHWSQHRARRKAGGELQNPKHELADAE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++LA +KD LTG+DY RFTR+MLL+QG FAAFL A P ERA LLE++TGTE Sbjct: 120 SGELLATGLKDVAAAIERLTGMDYQRFTRAMLLAQGDFAAFLRAAPDERAPLLEQITGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + A + +L + +G+T L +LT L + L T QQ Sbjct: 180 IYSRISIAVHERLRDALEQQRQLATETAGITPLDAATHTALTQESAALQKQLAALATRQQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q +L EL E +R + A + P+ L+LAQ A L + R+ Sbjct: 240 QTAAALARAQNIAELTAELARLDEQHTAHQAALARFAPERERLALAQRAALLDADYARL- 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 L H +QQ R ++ A+ + R Sbjct: 299 ---DTLRHTQQQ-------------DRTALATLDAQAPVHTAAVAAAQQNLAAATTRVHA 342 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 A + ++ Q + LR ++QL EQ A L A E A A+ Sbjct: 343 EKQRLAAAQPRWQQTRAYDHTLRHQREQLATLEQSAATHTAAQTALAAAEKHAAAARENS 402 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 R V ++K L +Q + +E + ++ Sbjct: 403 ARAD-----------VARKKTETALAAHLQG----------------RLLREYRAEKDNI 435 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ--SRLLALENE 538 RI LE QRA L G+PCPLCG+T HP A + L Sbjct: 436 LRELAYHQRIADLEQQRAHLHDGEPCPLCGATEHPYASELPAQPDDLTARLETLDTYIKR 495 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 + LGE+ + L + ++ Q+ EN + + + A Q L Sbjct: 496 AETLGEQHENAQHALASAREKQQQTENTLALAAEKARNSAVHAEQHAALQQTYAQTLAAR 555 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 Q L +D + A + I + + +E+ + T T A Sbjct: 556 QALLVNRDPD--------------AEETAQQRAIAEAEAAMEKARDTCQTAQTAAAANQQ 601 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 Q + + L +QQE LQ QQ L+++P ++ L E Sbjct: 602 QRAQLHARLTAQQQE-------------LQTAEQQFAAALKSIPVNNPLRAHETETNPLP 648 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 + + + ++ + A F F D+ A+ AA + T Sbjct: 649 CEAGEGTGIPMKKAKAFYMGTRGGGVKN-RAATTDFTE-----TFADETAWQAARLPAAT 702 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 L + L+ Q T A LA DD T+ Q Sbjct: 703 REALARQAAALDQQTLTLHTRQQDRAARLASLTAQSTDDPDTATLQARQ-----EADEHT 757 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 +++ + + +L + ++ Q IA+ + W L+ LIG+ +G K+R + Sbjct: 758 RQQHQQTLAANQHRLAEHKRASERLAAQQQAIAKQAAETRRWQNLHELIGAADGKKYRNY 817 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 AQ LT +++ AN+QL +L RYLL + LE+ ++D +Q R + LSGGESF+ Sbjct: 818 AQSLTFASVIAQANRQLVQLSDRYLLTADPARPLELNIIDNYQGGETRSAKNLSGGESFI 877 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVE 1018 VSLALAL L+ + +ID+LFLDEGFGTLD ETLD+AL+ L L GK IG+ISHV Sbjct: 878 VSLALALGLAQMSGENMQIDTLFLDEGFGTLDEETLDSALETLAQLRTHGKHIGIISHVA 937 Query: 1019 AMKERIPVQIKVKKINGL 1036 A+ ERI +I++ NG Sbjct: 938 ALTERIATRIQITPQNGG 955 >UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG58_CHLPD Length = 1224 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 308/1216 (25%), Positives = 512/1216 (42%), Gaps = 174/1216 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KNLNSL GEW IDF+ + S+G+FAITGPTG+GK+T+LDAI LALY +TPR Sbjct: 1 MKILSLRFKNLNSLVGEWFIDFSAPEYVSDGIFAITGPTGSGKSTILDAISLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+ S N++M+R T EC AEV FE +R W+Q+RAR P G LQ + E+A Sbjct: 61 LEKVNSSTNEIMSRHTGECFAEVVFETGTGRFRCHWAQHRARRHPLGILQAQKHEIADAL 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+++ K++D L+ TG+D+ +FTRSMLL+QG FA FL + P ERA +LE++TGT Sbjct: 121 TGRVIETKLQDTLQAVVERTGMDFDQFTRSMLLAQGGFAVFLQSPPDERAPVLEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E++++ + ELE L+ + SG+ LL + +Q+ A LQ DEE +I Q Sbjct: 181 IYSAISVKVHERNRAEQQELETLRVECSGIILLDDDALQAAKAELQAKLDEEAGIINRQS 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + + SL WL + ++ E + + ++ + + LA+ A P + I Sbjct: 241 EAEASLRWLRQILVMKGELADMESDFEKLELSDRDFSGDRERMELARRAAGFEPAYMIIR 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + ++ L+ + +L+ + R Sbjct: 301 QQQELQDRELREKSGAEHELERLNTDFTEHTERFREAEQKLEIFKGQEKELSMVVREVRA 360 Query: 361 WNNEPAGWRAQFSQQTSDREHL---------------RQWQQQLTHAEQKLNALAAITLT 405 + +G R Q + ++ + L R+ +Q+ T AE + LA Sbjct: 361 LDIRISGKREQCDEMAAEIKALCERISASDSIICGIKREMEQERTEAEDSESYLAEHGTD 420 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIV-PQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + + Q Q G ++ + K + + N E + A + Sbjct: 421 SRLAASLSGIEALVLQYEEAQAEERDAGVLLAERHKLFENAKTLLLNFQPETVRAGEAFD 480 Query: 465 EMRQRYKEKTQQLA-------------DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 + R R++E + LA V+ + E+ ++ L + A + + + Sbjct: 481 QSRFRWEELSATLASLLQGTDISNLRMAVQELEERSRNLEILSVRIAAMAEREKRIVTLR 540 Query: 512 TSHPAVEAYQA------LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT-------- 557 + PA+++ Q+ + Q + + +++ E +R D Sbjct: 541 ETLPAIDSVQSRVAEEIDRLVLLQEKAEQVVEALQREAELYLKIRSLEDERKVLLYGSPC 600 Query: 558 ----------------------KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 ++LQ + + + AL + + + Sbjct: 601 PLCGSRHHPWADGAVPEPSAEGEELQHAKASVLEISEKITALRIEAAGAIKDRAHNEEQI 660 Query: 596 DDIQPWLDAQD----------------EHERQLRLLSQRH--------------ELQGQI 625 +++ L +D E+ LRLLS+ H L+ Q+ Sbjct: 661 AELRILLSGEDAVCRNLAVQLEIAGDLNAEQVLRLLSEAHCAAEKEAERLGKAILLEKQL 720 Query: 626 ---AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN 682 + Q++ + + + ++ + + + + + + + R+ + R+ Sbjct: 721 LFSESEAQRLHRLFTEAVRAEEKAEYEVKTAGMEVERAMDVQRKIQERKAAIRESLNREY 780 Query: 683 ELTALQNRI----QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 + + + + + IL + + + T + + T + Sbjct: 781 DGYGIVPQAARSCRDVLLILHSRLERWHRANERRTSAYQRIAILEGNLKMQEEMLMTRKG 840 Query: 739 QDVLAAQSLQKAQAQFDT--ALQASVF----DDQQAFLAALMD--------------EQT 778 + + L A+F T L+ + F D++ A+M E Sbjct: 841 EHAEKEKLLAACTAEFTTLNELRIARFGEKNPDEEEHRLAIMLKCSEVDLDGARRTCEAA 900 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA----------LTVTVEQI 828 TQ+ QL + + E A Q + G +EQ+ Sbjct: 901 STQILQLSTRIAMLASSLTERAMKIREKEALFLQELSESGFDGMGGFVSSRLDREELEQL 960 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADN---RQQQQTLMQQIAQM------------ 873 +Q+ + E T +GE + +L+ + D + L +++ + Sbjct: 961 EQQAKDLAARRLELETLRGERQYKLRMEEDRALTENSPEELQEELDALFGRLDIVRSDTA 1020 Query: 874 --------------------------TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 + W L+ LIGS +G KFR FAQGLT + + Sbjct: 1021 SVKLHLYEHEQAAVMLREKTIALVARQIECSRWSLLHELIGSSDGKKFRNFAQGLTFEIM 1080 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 VH AN+QL + RYLL R LE+ V+D +Q +R T+ LSGGESFLVSLALAL L Sbjct: 1081 VHHANRQLMNMTDRYLLVRDVQRPLELNVIDNYQGGEIRSTKNLSGGESFLVSLALALGL 1140 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 S + S +DSLFLDEGFGTLD + L+TAL L L+ SGK IG+ISHV ++ERI + Sbjct: 1141 SQMSSRNVSVDSLFLDEGFGTLDEDALETALQTLAGLHESGKLIGIISHVPVLRERIGTR 1200 Query: 1028 IKVKKINGLGYSKLES 1043 I+VK +NG G S + Sbjct: 1201 IEVKPLNG-GRSMVSG 1215 >UniRef50_A1SUG5 SMC domain protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SUG5_PSYIN Length = 1234 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 369/1231 (29%), Positives = 557/1231 (45%), Gaps = 185/1231 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+R KNLNSLKG WKIDF F NGLF ITG TGAGK+T+LDAICLALY +TPR Sbjct: 1 MKILSIRFKNLNSLKGHWKIDFQDADFLENGLFVITGQTGAGKSTILDAICLALYQQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++QS+N+LMTR T EC AEVEF VKG+ YR FW Q RAR G LQ P EL+ Sbjct: 61 LDRITQSKNELMTRGTWECSAEVEFSVKGKGYRVFWEQKRARKSAAGKLQAPICELS-LI 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G +L K + L+ LTGLD+ RFT+SMLL+QG FAAFLNA P++RAELLEELTGTE Sbjct: 120 EGDVLCTKSSEVLKQVIELTGLDFSRFTKSMLLAQGGFAAFLNASPRDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +I+ VFE++K A+ EL+ L QA + +L+ EQV L +Q+L +++ + T + Sbjct: 180 IYCEIAKHVFERNKQAQAELDLLIKQADVLEVLSEEQVDELNKQVQLLAADKQTVQTDLK 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW---- 296 + +L WL L+++ + + L A + + + + LAQ A+ L + Sbjct: 240 DLEGALLWLKNAQVLKEQVEAQLRLLTNAQQSAAEFKNKQQQIELAQQAKRLEQPYQNQL 299 Query: 297 ---ERIAEHSAALAHIRQQIEEVNTRL-------QSTMALRASIRHHAAKQSAELQQQQQ 346 E+I L Q+ + + +L +S A + S++ A + ++ + Sbjct: 300 LNAEKIQSGETLLVENEQKNKILQAQLIECKNGAESLTAAQKSLQESHAVRHNKINEHLM 359 Query: 347 SL------------NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ-----WQQQL 389 L L + + +QQ +D L+ +QQ Sbjct: 360 PLDLAIGQLTGLCGEQQLAVDKQINTAVETQQTLNIRLAQQKTDNLALKTLNEGLQKQQA 419 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 H Q+ L + + + + L++ LH ++ K++ A+ Sbjct: 420 AHHLQESLPLIEQQFSFYIKQQSQLKDSLSGSSELQKKQSVLHNDLLDVHKQVKLSAQAL 479 Query: 450 QNVTQEQT-------------------QRNAALNEMRQRYKEKTQQLADVKTICEQEARI 490 Q N L E+ + + Q L+ + + + AR+ Sbjct: 480 HEKQLLLQQVQQHRESLLDSGQFSSAGQMNIILTEVFDQQSQNQQALSLTRQLDDSYARL 539 Query: 491 KTLEAQRAQLQ------------------------------------------------A 502 + A+L+ Sbjct: 540 AAVHKGSAELEQSIKGNQQALMVSEQQGLECKNSLLALQKLLKQEQVIAQLSDLKKHLQK 599 Query: 503 GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 PCPLCGS HP+V YQ ++ Q L E ++ + E+ + + ++ T+QL Sbjct: 600 DNPCPLCGSIEHPSVSNYQPVDIPETQIALSLQEQRLESIREQYSDAKNRIKTDTRQLAE 659 Query: 563 DENEAQSLRQDEQALTQQWQA------------VTASLNITLQPLDDIQPWLDAQDEHER 610 +A +L Q + +WQ A L++ Q L + + ++ + + Sbjct: 660 YRLQAANLSQLLEKQLTEWQDSPYLSAFTYQQSSFADLSLLTQSLREKRFNIENLQKQIQ 719 Query: 611 QL---------------RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 Q+ + + L Q+ + Q++ + QQ+LL L Sbjct: 720 QIDAQLPDLREVMQALTQKANDHDRLLQQLNNQHAVADNEDQRLAKEQQMLLAQLEENQQ 779 Query: 656 TLPQE----------------DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 + Q+ + +W+ ++ +Q +Q + LQ+ + + + Sbjct: 780 GICQQLPAELLKKQVEVEQLFNSPAAWIENQKSLILLYQSQQAQSITLQSLVDKQAHQIA 839 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL--QQQDVLAAQSLQKAQAQFDTA 757 Q + W+ Q Q+ Q Q L+ + + Sbjct: 840 LQEQQYAQQQSVLQQLQTLWQSNQSQLTEQQRQRADEFGSQSQAQIRQLLESEKNELSGQ 899 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT------------------- 798 L+ ++ + L + + + L+ ++ T Sbjct: 900 LELAMASLLNVQGQSARLAGQLAEQKNTQAELQGNQQTLLTVFKKQLITSPFIDQTDFIN 959 Query: 799 --LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL--------------------AQTH 836 L + + L Q+ + L + QQ L A Sbjct: 960 ARLAEEPLQVLLALQKQLHEQLLTEKTRLSSAQQSLEKHLKLSVTEEDPLVLENAQAANQ 1019 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 +K E + +L+ D + QQQ L+ Q Q E W LN LIGS +G KFR Sbjct: 1020 EKSEVIGEQLVEKKGKLQADIRLKAQQQALLDQQVQQKDSAEQWAMLNKLIGSADGSKFR 1079 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 FAQGLTLDNLV+LAN+++ LH RY LQR E L ++V+D WQA+AVRD +TLSGGES Sbjct: 1080 TFAQGLTLDNLVYLANKEMADLHQRYQLQRNLDEPLALQVIDLWQANAVRDVKTLSGGES 1139 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSL LALALS+LVSHKT+I+SLFLDEGFGTLD++TL+ ALDAL+ LNA+GK IGVISH Sbjct: 1140 FLVSLGLALALSNLVSHKTQIESLFLDEGFGTLDADTLEIALDALERLNATGKLIGVISH 1199 Query: 1017 VEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 V+A+KERI QI V K +G GYS+L+ + Sbjct: 1200 VDALKERINKQIHVSKGSGAGYSQLDKQYVF 1230 >UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepID=Q897Z0_CLOTE Length = 1045 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 181/1074 (16%), Positives = 418/1074 (38%), Gaps = 66/1074 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + IDFT + +F I GPTGAGKTT+ DAI AL+ E Sbjct: 1 MKPLKLTMCAFGPYADVQIIDFTE--LDNRNIFLINGPTGAGKTTIFDAISYALFGEASN 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-LQVPRVELARC 119 + ++EF ++ + Y+ + R + G E Sbjct: 59 TNKDRDGLRSDFASQETITYVDLEFSLRDKKYKVTRYPQQPRKKSRGEGFTYKNSEAFLI 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 V E + G++ +F + ++L QG+F L A ER + ++ GT Sbjct: 119 LSEGNTVSGVTLVEEKINEILGINKNQFRQIVMLPQGEFRKLLEADSSEREIIFRKIFGT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQ----ASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 E + + ++ ++ K ++ K+ + V + E++ + + L +E L Sbjct: 179 EHFEKFQKVLDDKRKEIYKDIAKVNTERITNVKRVDVTNNEELSKIIDK-ENLNFKEIIL 237 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + E + ++++ + + + EE + + + L Sbjct: 238 GIEEIIENDEIQEQNLSKKIEEINGEEIKIQNEIVLLEEVNKKIKEKEEYEKKYKELIFQ 297 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 E L R+ +E T L++ + + K+ E++Q+ ++E Sbjct: 298 KEEYENKKDKLYQGRKALEV--TMLENNFKEKENYFQLKEKEYIEVEQRVNLYRKKVEES 355 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL 415 + + R + S + + + + + + ++ + + + Sbjct: 356 IKKLKEEESKEEERKETSNKLTILKSFQNKVRDYEEKKNRIEQIKGELEKKQKEYSSLGS 415 Query: 416 AQHAE---QRPLRQHLVALHGQIVPQQK---RLAQLQVAIQNVTQEQTQRNAALNEMRQ- 468 + L + V L V ++K ++ + +V ++ N+ L +++ Sbjct: 416 KIKNDRTKLNNLNKEFVELQKCEVEKEKILSKVEEKEVICNDMRDFYKYYNSYLINIKKH 475 Query: 469 --------RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + ++K + I E + L+ G CP+CGS HP+ Sbjct: 476 GNLKINFDKIEKKYMETKLKYEIMEDNFKKGQAGILAKDLKDGVKCPVCGSKHHPSPA-- 533 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ-ALTQ 579 + ++ + +L ++ E ++ E+ + + + + + + +L + Sbjct: 534 EMIKGVPTEEKLNQIKYEFDEIKEQRDMILQNMSDLNGVITSSNEIISDYKLKLEKSLGK 593 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 + + + + L+ ++ E+ ++ + + + + ++ Sbjct: 594 IIEEYWKKDILNFISIKGKEIALEVENLKEKLKQIEEDNKKKINIKNSLIKLEEEIEENN 653 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 ++L +A +E + ++ +S + ++ ++N++ +L +LE Sbjct: 654 ILLEKLNEEYKDSFAKVKSEESSILAIEKEIPEKFRSVPELNKKIKNIENKLLELNQLLE 713 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 + E+ ++ + ++L + +++ + + ++K + + + Sbjct: 714 KARKEYEV--------------INNEYISLKTNKKSKLENLQELLKEIEKNKDNMNKKII 759 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 D +LA + E L L++ Q+ + + + + + Sbjct: 760 ECGLKDYNNYLAVKLSEDQLKSLDEDIQDYNQNIKIIKFNLNRAINNSKDLE-------- 811 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 + ++ I+++L + +Q+ + + +L + ++ + L ++I++ + Sbjct: 812 --FIDLDIIKEKLEKVNQEKNQLNREYNIVFSRLDNNIKTLKEIKKLNEKISEKEDDYKI 869 Query: 880 WGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKA-------S 929 G L + ++ F ++ D ++ AN +L+++ G R+LL RK Sbjct: 870 IGELARISNGDNDERITFERYVLAAYFDEIIAAANIRLSKMTGGRFLLSRKEEKGKGRRQ 929 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 E LE+EV D + A R +TLSGGESF SL+LAL L+D++ + +D++F+DEGF Sbjct: 930 EGLELEVFDNYTGKA-RHVKTLSGGESFKASLSLALGLADVIQSYAGGISLDTIFIDEGF 988 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 GTLD E+LD A++ L L G+ +G+ISHV +KERI +++ ++ Sbjct: 989 GTLDPESLDNAIETLVELQNGGRLVGIISHVPELKERIDSILEIIPTKEGSKAR 1042 >UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilonii AK1 RepID=A6D4U6_9VIBR Length = 1014 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 243/1059 (22%), Positives = 431/1059 (40%), Gaps = 85/1059 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ G+ IDF++ LF I GPTG+GK+++LDAIC ALY ET Sbjct: 1 MKPLKLTLQAFGPFSGKESIDFSQ--LGDCPLFLINGPTGSGKSSILDAICYALYGETTG 58 Query: 61 L-SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR---VEL 116 Q + D T L EFE+ GE Y S ++ + G R L Sbjct: 59 SERTGDQMRCDYADSKTLTTLV-FEFELSGEKYEVTRSPDQEVPKQRGEGTTKRSHSATL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + ++ ++A+K K L GLD +F + M++ QG+F L A KER + +L Sbjct: 118 LKLSNNTLIANKPKQVGVAIQELLGLDVKQFRQVMVIPQGKFRELLTASSKERESIFGQL 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEKQL 235 T++Y I +F++ R E+ Q G + + + E +Q L SL VL+ ++ Sbjct: 178 FQTQVYAAIERTLFDKAAGIRKAKEEFDNQIKGALDVASLESLQQLNDSLDVLSPNVERA 237 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA-------QP 288 Q ++ N + + Q +R QA AE + + ++L + Sbjct: 238 KQELQVVEKRKNQAQQIYDQAQSLEKRFQAKSNVEAEAKTLNDKRGEIALNKQIMTSHKQ 297 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 A ++P ++ + ++ + ++I+ ++Q R + +Q + + Sbjct: 298 AIKIKPTFDETIKLEQNMSTLSERIDIGRGKIQQAEKERDASITALEQQ----KLVHKRS 353 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 +E +Q + + + +Q ++ L A TLT Sbjct: 354 EALNEESYSLKQLEKTLNQLDDKRREAQHADSQFNTYVEQHKQVSDEVERLQAQTLTFE- 412 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKR---LAQLQVAIQNVTQEQTQRNAALNE 465 ++ R +Q L + + ++K+ + L+ N+ Q Q N Sbjct: 413 -------KSLSDARKEKQKLGEVTMSLSERRKQWQGIETLKTIAANIVALQKQLNDT-QS 464 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + Q +T CE A L+ G CP+CGS HP + A Sbjct: 465 TVKNLSASAQAATRKRTECEIAWHSSQASILAATLEEGTACPVCGSVEHPKLAAPSQETV 524 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + ++ R ++ +L + + E L + Q + Sbjct: 525 SL----------------QQLNDFRANETSVNAELNQQQQELVRLNSVLDSAVLQRSDLI 568 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 SL + LD + E + Q+ +L + +I + + E + Sbjct: 569 NSLELDEAKLD------QSAIETQNQITMLENKITELNKIDLSAMESRLNKHVSETSAKQ 622 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L ++ +E+ Q E+ + N LQ + ++ L L Q+ Sbjct: 623 ELLNTLTNSVNKAAISKEQLRAVVVQLESNNKTGYANAQLVLQRQAS-ISDELMQLSQAL 681 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E E + L Q + L + + + ++ T L +S F D Sbjct: 682 EAAQRYANQTAETLVKYQSHLDTLTKQLKDLSNEHASSVE-------RWKTLLLSSHFSD 734 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 ++AFL++++DE + LE + + + E L + V Sbjct: 735 EEAFLSSIVDEPRIAALELELETFVRDEVRVSEQLKLLTEELKGVE----------HPNV 784 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 +++ +T + + + +L + + +L+ Q A++ +Q + G L+ Sbjct: 785 QELLVAKNETDASYQHMLGQFQQQQSKLDSLNNVLTRVNSLVSQNAELDKQYQVVGTLSD 844 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVE 935 + K G+K +F G+ LD+++ A+Q+L + GRY L+RK A L++ Sbjct: 845 VANGKTGNKISLHRFVLGVLLDDVLIQASQRLRLMSKGRYDLKRKETRSKGNAGSGLDLI 904 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+DEGFG+LD E Sbjct: 905 VEDAYTG-KWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLDPE 963 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 +LD A+ L L SG+TIG+ISHV +KE++P+++ V Sbjct: 964 SLDLAVQTLVELQQSGRTIGIISHVSELKEQMPLRLDVH 1002 >UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 Tax=Veillonella RepID=D1BNU5_VEIPT Length = 1027 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 232/1084 (21%), Positives = 426/1084 (39%), Gaps = 105/1084 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL ++ + +DF + +F I GPTGAGKT++LDA+ ALY E Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNE--LQDHSMFLIAGPTGAGKTSILDAMVYALYGEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 + + + F + YR + + G V Sbjct: 59 EVRKTDAIRSDFAEPHRMTRVDFSFAIGDAQYRVERLPKQMVAKKRGTGMREQNASATVY 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + K++A + + G +F + +LL QG+F L A ER ELL Sbjct: 119 ERKNGEWKVIATSAAAIRDTIQQIIGFRKDQFLQVVLLPQGEFRKLLVASTSEREELLHT 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEK-LQAQASGVT---------LLTPEQVQSLTAS- 224 L TE+Y ++ + + A+ +E+ L Q + ++T E V+ L A+ Sbjct: 179 LFRTELYRKLQETLKAAYDEAKAGIEENLTKQTVFMQSIPHDGATPMVTIEHVRELLANR 238 Query: 225 ---LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 L E + +T +Q N + ++ QQ + L E + Sbjct: 239 GPHRDALAVERDEAVTVVEQFNVLRNQWSLYNQAQQSLAEATSKLDLVKTRETERVNLSE 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + +++ E A L + Q + + R++ A + + Sbjct: 299 KVQFLNSLAPTHELYKQYIEKQAVLKTLEQALSDAEERVKLATQHEAKCLEVYSGLEGQA 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 + Q+ T L + + + +E + +FS S E L + + A+Q+ Sbjct: 359 ES-IQAKRTTLAQFQQQAEKFDELDVLKKKFSTLHSSLEELDSKKSEDALAKQR------ 411 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L T + AL + + + + + R ++L I V +E + Sbjct: 412 -ELVKTLEADLEALRKQVQDNNKFLENTPIIQEQLNDLHRYSELLEEISKVQKEIDDKGQ 470 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 L + + + L ++ + QE R L +PCP+CGST HP + A Sbjct: 471 RLASLDRTVQVAKVHLERLEHLM-QEGRAFELVHLV---VDNEPCPVCGSTDHPRLAAKP 526 Query: 522 ALEPGVNQ------SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN----EAQSLR 571 + P ++ +R +AL+ + ++G++ TL +LD +TKQ+ + Sbjct: 527 EIYPTKDEIEEARIARDIALQKQASEVGQQK-TLVTRLDELTKQVDAQVSTLKLSMDDFS 585 Query: 572 QDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQ 631 + A QQ L+ ++ A EH L R +L AHN+ Sbjct: 586 EKNFASVQQDLLAKMEQLTALRGKSELLSKTIAHKEH----NLKVARDKLATLEIAHNE- 640 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 +++ +E R + + + TLP D + A Q ++ Sbjct: 641 LLKNLHDLEIRISSVQANIDALSKTLPTTD----------------------IAAWQKQL 678 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + L + + ++ N EQ A + +TL Q ++L Sbjct: 679 ESLDSEITIYDEQVKVGKT-------NLDAAREQLNAKRGRLETLSSQVKEETKNLNLMY 731 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 + +LQ + F+ AL D + + L+ +A+ + A A Sbjct: 732 KNYTKSLQTISLA-EDDFVEALRDIKEIETYRTQLHALDEAFNKARAVYD--AALKASET 788 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 +P D ++ + ++ + ++ K +TL + Sbjct: 789 VVKPSDTVSDEIYATAVEHR--------DTLVGNLAAWDKETKHIETTLNSLETLEAAMG 840 Query: 872 QMTQQVEDWGYLNSLI-GSKEGDK---FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR 926 + ++V+ LN L G ++G K F ++ G LD +V+ AN +L ++ RY L+R Sbjct: 841 EAREKVKFLSRLNDLANGGEQGFKNVTFERYVLGAILDEVVYAANLRLQKMSRNRYSLER 900 Query: 927 -------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTR 976 + + L++ V+D + + R TLSGGE+FL S+ALAL L+D++ + Sbjct: 901 SDYTGGGRGKQGLDLAVMDAFTGQS-RPANTLSGGETFLASMALALGLADVIQSYAGGIH 959 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 +D++F+DEGFGTLD +TL+ A++ L L +SG+ IG+ISHV +K RIP ++V + + Sbjct: 960 MDTMFIDEGFGTLDPDTLELAMETLVQLQSSGRLIGMISHVPELKSRIPAHLEVIRGDDG 1019 Query: 1037 GYSK 1040 +K Sbjct: 1020 STAK 1023 >UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW9_9FLAO Length = 1007 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 270/1073 (25%), Positives = 477/1073 (44%), Gaps = 98/1073 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI SL KN+NSLKGE K+ F P S GLFAI GPTG+GK++LLDAICL LY TPR Sbjct: 1 MKIESLSFKNINSLKGEHKVHFDESPLNSGGLFAIIGPTGSGKSSLLDAICLGLYGRTPR 60 Query: 61 LSNVSQSQ----NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 +S+V++S+ ++T+ E A+V+F Y A WS + RN L+ ++L Sbjct: 61 ISSVTKSKIEQDGSILTKYQKEAYAKVKFSCNLGTYEATWSISTNRNNK---LRECEMDL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 A ++K + L L GL Y +F +S+LLSQG FA L + KER+ELLE++ Sbjct: 118 WNVATEISFSEKKTEVLAEVERLIGLSYDQFVKSVLLSQGDFATLLQSNEKERSELLEKI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT--LLTPEQVQSLTASLQVLTDEEKQ 234 T T IY I V+E++ S ++++ + + L++ E +L L ++E Sbjct: 178 TNTSIYRSIGKKVYEKYMSLKSKILTQKTILDNLQDKLISKETESDFKENLNQLKEKETI 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA-ALSLAQPARNLR 293 + Q+ L+ LT +++L E + + L+ L ++ + L Q Sbjct: 238 ERKKLSEYQKDLDQLTLKEKLSSEENVVKTDLKTLLDHKQSFDNENQHKLEQHQKTLEFE 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 + ++ I + + S+ +++ +L + + Sbjct: 298 DELQEFNSLQKDGDRLKASITREQEEITKINSNINSL----HQKTEDLLKTKVEPQAVES 353 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 E ++ ++ + E R+ S ++ L + + + + L + LT + Sbjct: 354 ELEKLQETHTELNTRRSSKLHDFSAKKQLLNKELEGLDLKFQKQELDSFIGELTRKSEIS 413 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQ--------------------KRLAQLQVAIQNVT 453 + ++ L+ + L +I Q+ +L +L+ + Sbjct: 414 SEQIQNLEKELKD-VENLEKRIQEQEHLRDTLKEAAHESRILKDLGDQLLRLENKRSILH 472 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 +++++ + ++K ++L ++T E + +E R +LQ +PCP+CG+ Sbjct: 473 KKKSEYPEQIKLKESKFKTAEKELDHLQTKKENQNLRLEVEDLRQKLQKDEPCPVCGAID 532 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 HP E + ++++ A E + +++ LQ E SL + Sbjct: 533 HPYSEHLPEVISDLDKTIAKAKEIAKQ---------------LSRDLQHLNAEFSSLVKQ 577 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + L ++ + + ++ + D L++ +E E L + Q + + Sbjct: 578 IEDLNKEANELHSKRSLNQEEFDLKFKELNSLNEGESYANL----EQKTRQTIENYKAFK 633 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 QY+ +++ Q + EL +Q + Sbjct: 634 QYKVELKALQSSIS--------------------------------ILEELLDIQKEGKS 661 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 ++ +++L + D+L T ++W Q+H + ++ S + +L + Q Sbjct: 662 ISEKMKSLYKGDDLGRLV-TSYTKSWNQLHTELKSVSSSLDKQTSDKAVLNNNLSQLQQG 720 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + L+ F + A+ M +L K ++ + + + L + Sbjct: 721 LKSMLEGKGFANIAEANASRMKSSNYNELLLRKSDIVKNIKVKEEKLEGLENQLKSLEFV 780 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + + ++ I+ L T +KL + I++ L +N + +T+ I ++ Sbjct: 781 HFTEKDKTEIAIDNIKVTLNSTREKLED-------IKRVLNNQKENLTEYKTIQDSIIEV 833 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRK--ASEA 931 + + W LN LIG G +F KFAQ L+L L+ L N++L +L+ RY L R + Sbjct: 834 QKANKKWEVLNRLIGDATGTEFNKFAQDLSLQRLILLGNKRLNQLNDRYELDRFIAGEDK 893 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDS 991 ++ V+D R +TLSGGE+FL+SLALAL LSDL S I+SLF+DEGFGTLD Sbjct: 894 NQLYVIDNHMGGLRRSVKTLSGGETFLMSLALALGLSDLASKNVEINSLFIDEGFGTLDP 953 Query: 992 ETLDTALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 ETLD LD L+ L A KTIG+ISHV A+KERI QI + + N GYS+LE Sbjct: 954 ETLDLTLDTLERLQAESNKTIGIISHVNALKERIQTQIVLNR-NTQGYSQLEV 1005 >UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RHS7_CLOCL Length = 1047 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 232/1087 (21%), Positives = 447/1087 (41%), Gaps = 94/1087 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L G +IDFT +F +TGPTG+GKTT+ DAIC ALY ET Sbjct: 1 MRPVKLVLSAFGPYSGVTEIDFT--LLGDKNIFLVTGPTGSGKTTIFDAICYALYGETSG 58 Query: 61 -LSNVSQSQNDLMTRDTAE-CLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVE 115 + + + ++D + E F VKGE Y + R + G +Q +E Sbjct: 59 NMRSGKELRSDFIDEKENHLTYVEFIFNVKGEDYYIKRVPQQMRKKLSGSGETMQNATIE 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 L + A + K D + + G++ +F + +++ QG F FL A KE+ +L + Sbjct: 119 LRKLAKDEKPLTKDGDVKKSIDEIMGINAEQFRKIIMIPQGDFRDFLCASTKEKETILRK 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKL-------------------------QAQASGV 210 + TE + +I + R + +L +A + Sbjct: 179 IFNTEPFKRIQDKLALGETKIRNTVNELTLGLRETFSLVDCGDNNNLKNLIINRATTGEI 238 Query: 211 TLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL 270 L EQ+ L ++L ++++ + +N + ++ + ++ L + Sbjct: 239 VDLLKEQLLKDINEENKLKLSIEELDKVKEEKLKVINEIIETNKKFDQKEEIKKLLTGLM 298 Query: 271 AEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 ++ + + L A+ L P + E + Q+ N + Q + Sbjct: 299 NKKSEIIEKEKLLDSGIKAQKLLPFEKSYIER----KQEQAQVMLANEKGQKDLDDAKVR 354 Query: 331 RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 A ++ ++ + + + + + +W E + + L +++ QL Sbjct: 355 FLRAEEELKGIENLKSATDEKKESFVKLTEWLKEVELLEEKKNAINKSSSVLERYRTQLK 414 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQR-----PLRQHLVALHGQIVPQQKRLAQL 445 + ++ + ++ I TL E + Q+ + L G++ K + + Sbjct: 415 NEKENIISIEGIIETLLRKEKFIDENKLQHQKIIFKYKEMEENHKLLGELYKLSKFIVEN 474 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + ++ + + L + ++ Y+EK + + +I +L G+P Sbjct: 475 KQVVKESSDKLKALEENLVKDKRVYEEKNDFIINSSSILLAR-----------ELVEGEP 523 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CP+CGS HP+ + P + R AL +E+ K + L ++ + ++ Sbjct: 524 CPVCGSKEHPSPRLVKGDIPTKEEMR--ALTSEIDKKQRDIIGLSAVINELQGKI---FA 578 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQI 625 ++L+Q L + + + L+I + I P +++ QLR +Q+ EL+ +I Sbjct: 579 SMETLKQKNNELIVR-KLLVEGLDIYDYD-NVIAPVGKNIAKNKEQLR--AQKEELEKEI 634 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT 685 ++I++ + LL E S LA Q+ Q R + Sbjct: 635 DKSKH----LTEEIDKNKGLLKGAKEKETKLNDLILEVSSKLAKEQEALQGIYLRVPKE- 689 Query: 686 ALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQ 745 + I L+ +E L + + + + S ++ L++ +A Sbjct: 690 --YHEITSLSKAIEILDKEIKNNEILMEKLQNQYNDCKTYLEKAISTKEILEKNLEVATS 747 Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 L+ QF+ L +F++ + + A + +LE + + + + + Sbjct: 748 QLENTYKQFEIELLK-LFENAEEYKLASGTINEIERLELEIREYNDAIKLNNDIYMNLEK 806 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 L G A V V +++E+ ++ + T + I +LK++ D Sbjct: 807 EL----------GEAKKVDVTVLEEEINMIKGQIEDMRTMRDGISSRLKRNRDILNSALE 856 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRY 922 + I ++ + G L +L K +K F F G D+++ AN +L ++ GR+ Sbjct: 857 KTEAIRTKEEEYKILGELANLALGKGAEKVTFETFVLGNYFDDVIASANIRLMKMTGGRF 916 Query: 923 LLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---S 972 L R + + L++++ D + A R TLSGGESF +LALAL LSD V S Sbjct: 917 YLVRREEEGSSRGRKGLDLDIFDNYTGKA-RPVNTLSGGESFKAALALALGLSDEVQNNS 975 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 ++++F+DEGFGTLDSE+LD A+ L L SG+ +G+ISHV+ +KERI Q+++ K Sbjct: 976 GGIELNTMFIDEGFGTLDSESLDNAIRCLLDLEKSGRLVGIISHVDDLKERITSQLQI-K 1034 Query: 1033 INGLGYS 1039 +N G S Sbjct: 1035 VNAKGSS 1041 >UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM6_9GAMM Length = 1025 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 225/1085 (20%), Positives = 398/1085 (36%), Gaps = 103/1085 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L G IDFT F + LF I G TGAGKT++LDAIC ALY +T Sbjct: 1 MRPEWLSLSGFGPFGGTVTIDFTE--FGESPLFLINGSTGAGKTSILDAICFALYGDTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-----LQVPRVE 115 +DT+ + F + E Y + R Q P Sbjct: 59 GERSGAEMRSQFAKDTSPTEVSLRFSLGTERYLVTRNPRYMRAPKKATGADLTTQQPGAT 118 Query: 116 LARC------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 L R DG ++A V L +TG+ +F + ++L QGQ+ L A +R Sbjct: 119 LYRLGHTLDPDDGDLIATGVAKVLPEIEAITGMSADQFRQVLVLPQGQYRDVLTAPSADR 178 Query: 170 AELLEELTGTEIYGQISAMVFEQH----KSARTELEKLQAQASGVTLLTPEQVQSLTAS- 224 E+LE L GT IY ++ + + +S EK++ + S T E++ L Sbjct: 179 EEVLERLFGTTIYVRLEEALRKHAGDIGRSIEGANEKIRHELSQANASTEEELNELIQRS 238 Query: 225 ---LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 +E + A + QQ + + ++ Q+ + +AL + + E + Sbjct: 239 IEDEAKSDNELLKATAALESLQQKIGNVEANNKALQDLDKAAKALMEHQSNSESMEQDRK 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA-AKQSAE 340 + AQ A+ + ++ + + R Q T + + E Sbjct: 299 RIKRAQRAQPILALSAQVVSAETRSNSADEHVNSCGQRAQDTKEAAEKAEAALLSLSTPE 358 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 Q Q L L+E R+R E + + + L ++N Sbjct: 359 AQDVLQKLRDRLKELSRYRG---EMPTYLGLIDLVEGETALCKSASDALDAVLVEINEHQ 415 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 E + L H + + ++ L ++ + QE+ +R Sbjct: 416 KEI-----SEASVQLQLHRRRIGEVVSELTAKTVFESRRDLLKKIDARSKLAVQEEEERT 470 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + + + +K + ++ T+ + + +L+ + CP+CGS HP Y Sbjct: 471 THVT-LLSKCLQKETEARELSTVVQMQWHSAQAFLLSKELEPDRRCPVCGSQEHPHPATY 529 Query: 521 QALEPGV----------NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 + P + SR + KK E R Q + + + + + L Sbjct: 530 EGTAPSQVDIDAAQQAHDVSREAVFDARQKKEASESTIARLQQEMSEFRNELGDYDGSLL 589 Query: 571 RQDEQALT-QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 DE+ + +Q + AS+ ++ LD+ D E+ LRL + + ++ Sbjct: 590 DVDEEIIRLKQLEEEKASIEEAVRELDEAISNAD-----EKSLRLKASEDTARKKLDDAR 644 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 Q + + + ++E ++ L A Sbjct: 645 QTLARAETRLEDARKALPAEYRDQA----------------------------------- 669 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 L + + E E E ++ + + +T + + L+ Sbjct: 670 ---NLDSTYAEVSTNLEARERELVAAQEAMITTTDKSSSATAVLETAVKAACDLKEELRV 726 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 + D A+ S F + L A + + + L+Q + Sbjct: 727 VKEGLDEAVAESDFASIEDVLKAALSQDDIDALQQALDEYGTTLGVLTGRLKAAETAALG 786 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 D L E ++QE + T R + Q+ ++ L + Sbjct: 787 LVVENIDPLLVELQNAESVRQEALGVRNTAHDRTVLLNSCRVAINQERQAQESAYALYEV 846 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA 928 + + + + + F +F G LD+++ A+ +L + GR+ L+R+ Sbjct: 847 VGTLADVG------SGRVEGTQKLSFHRFVLGTILDDVLTQASMRLRSMTSGRFELRRRN 900 Query: 929 SE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRID 978 S L+++V D + + R +LSGGESF+ +L+LAL LSDLV S +D Sbjct: 901 SASDKRSVAGLDIDVFDEYTG-SARPATSLSGGESFMAALSLALGLSDLVQAQSGGIHMD 959 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 +LF+DEGFG+LD E+L+ A++AL L SGK IGVISHVE +K R+ +I V Sbjct: 960 ALFVDEGFGSLDPESLEQAIEALIRLRDSGKMIGVISHVEELKARMDKRIDVTSGPNGSS 1019 Query: 1039 SKLES 1043 L S Sbjct: 1020 LSLVS 1024 >UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroides RepID=A6KXN2_BACV8 Length = 1027 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 283/1063 (26%), Positives = 478/1063 (44%), Gaps = 60/1063 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI+++R KNL SL+GE+ IDFT EP S G+FAITG TGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MKIVAIRGKNLASLEGEFMIDFTVEPLCSAGIFAITGSTGAGKSTLLDALCLALFDCTPR 60 Query: 61 LSNVSQS----------------QNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARN 103 ++ ++ ++ R TAE +EV+F + GE +R+ W+ R+R Sbjct: 61 MNKAKENNVSVMDVADRGIAQNDSRSILRRGTAEGYSEVDFVALTGEVFRSRWTVRRSRG 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + G+LQ + L G + L + L GL + +F RS+LL+QG FA FL Sbjct: 121 KVSGSLQKVEMTLTNLTSGVEQQGTKTELLSRISELIGLSFEQFNRSVLLAQGDFATFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A+ ++AE+LE+LTGTEIY +ISA ++E+ K A +E + LQ + G+ LLT EQ+Q L+A Sbjct: 181 ARQPDKAEILEKLTGTEIYSRISASIYERTKRAESEYKLLQERIKGIELLTDEQLQQLSA 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L ++ L WL + L + +++L E E A+P+ L Sbjct: 241 EKEELQVRLSVSKKKEEALSGKLKWLEEEGRLNTGCIQAEESLSGIRKEIEVARPRYELL 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + + A+++R + + R ++ E+ ++ AL+ S EL + Sbjct: 301 ARIEQAQDIRDVYMEQRNARKQIDAGRSRLGEIEVAIRQNAALQTSANVQWEAAQKELAE 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + L+ + D+ R + + R Q ++ + Q + L + + Sbjct: 361 FKTYLSQQEPQLDKARALDVQLVENRKQLAESQKEAALALQAKDNL-----RQSVCKTEK 415 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 E TAL E+ L+ I L + + Q + A Sbjct: 416 DISLLMEKQTALQTWFERYTAYSQLIPAVELITSLLTNLEMARAQSVSNRQLLDKVKKAS 475 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 QR K Q+ + + E + R QL+ G+PCP+CGS HP Sbjct: 476 EAEEQRLKSVQQEAERLNRLLPAEVLL-----LREQLEEGKPCPVCGSFHHP-------- 522 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + E+ Q + + + ++ E + L+ A + Sbjct: 523 ------------------MREQTNVQSLQEEELNRAKEQVAKETEQLKNTLNARQLEMAR 564 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 ++A + + +DD ++ + L ++ L+ + +Q Q+ + + Sbjct: 565 LSALIENYVAQVDDTLKKVETYVSIIPNWKDLLEQGTLKHYVQQFGRQWNARLQEQTEIK 624 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI---QQLTPILET 700 + L + +E ++Q+ + Q NE L++ + + ++ T Sbjct: 625 EALTSKSAQRDSLKKEEANAIGLYEEKKQKEERQQAELNERARLRSSLLNGESTETVVAT 684 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + + + + + Q + Q L+++ V LQ+ + + + L Sbjct: 685 HARRQKELEQQLEKAMNLHHSLTVQAESYKGQTAQLEKELVRLTAVLQQDELKINEWLTL 744 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + D+ + +Q L+ + Q ++ + + +HQQ Sbjct: 745 QKETYAELEQLLSKDKSWILAEKQALGTLKEKETTLQAILAERRQKREEHQQ--APLKPD 802 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 E + + L T +I ++ +++ + +++ + E+W Sbjct: 803 TMENKESLIETLTACTAAKEMETGRLAQIEVTIQNHIKGKERIAGIEKELEEKNSIYENW 862 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTW 940 LN L GS+ G KF++ AQG TLD L+ AN+ L L RY LQR + L +++VD Sbjct: 863 AKLNELFGSQTGAKFKEIAQGYTLDVLLLYANRHLQDLAPRYELQRIP-DTLALQIVDLD 921 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 VR +LSGGESFLVSLALAL LS L S++ ++SLF+DEGFG+LD +TL A+DA Sbjct: 922 MMGEVRSVHSLSGGESFLVSLALALGLSSLSSNRMNVESLFIDEGFGSLDMDTLRIAMDA 981 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L+ L G+ IGVISHV M ERIP Q++V K G G SK++ Sbjct: 982 LERLQMQGRKIGVISHVAEMMERIPAQVQVVKT-GSGRSKVQV 1023 >UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella amazonensis SB2B RepID=A1S519_SHEAM Length = 1020 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 239/1065 (22%), Positives = 395/1065 (37%), Gaps = 72/1065 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L + +DF LF I GPTGAGKTT+LDAIC ALY +T Sbjct: 1 MKPLTLAITAFGPFVDTQTLDF--RALGEWPLFLINGPTGAGKTTILDAICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW--SQNRARNQPDGNLQVPRVELAR 118 D EF + + YR Q RA+ +G L Sbjct: 59 NEREGTQMRCDAAPDDVLTEVTFEFGLGDKVYRVKRMPEQQRAKKSGEGFTVQKSDALLE 118 Query: 119 CADGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 +G+ + A KV + L GL+ +F + M+L QGQF L A KER + Sbjct: 119 RIEGEHTTPLAAGKVTEVTAQIEDLLGLEVEQFRQVMVLPQGQFRKLLLADSKEREAIFG 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV-TLLTPEQVQSLTASLQVLTDEEK 233 +L T IY +I + ++ + ++L+A+ +G+ E V++L ++ L E Sbjct: 179 QLFQTGIYKRIEDSLKQKALELKARAKELEARRAGILETAGAESVEALNDAISALAPELA 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 A+Q + L Q E + R AL E + +++ Sbjct: 239 SATKAKQAAEAKLTAAKAQREAAEAKLREFSALNDTRLRLEAENAKAESMAALGMQLERA 298 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 E +A A ++ + A + Q Sbjct: 299 ALAESLAGTWQAWEERAKERKSAEAAAVMAAEAAKQAELSYANAKTAAAALPELEARRHQ 358 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 + A WR + + ++ E + Q L + L + + T +A Sbjct: 359 ----LKNEAERLAEWRPRMHRLSALNEAITGLGQTLNALDANLAHVRSRLGD-TQGRIAM 413 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN--AALNEMRQRYK 471 Q + L +L +V Q + Q I+ Q Q + L ++ K Sbjct: 414 LTQQRRDLSALASTAGSLEATLVQQTHVFERHQQLIEKERQAQKLATELSRLEADGRQAK 473 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 L + + E A+L G PCP+CGS HP+ ++ PG ++ Sbjct: 474 ANQDNLTRARELLELAWHQGQAAMLAARLLPGAPCPVCGSVEHPSPAHHEGALPGDDELA 533 Query: 532 LLALENEVKK--LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 + + L + + Q + Q N+A +L +Q Q Sbjct: 534 AAREAEQQAREMLSRARSEYKAQKQRLEVMQQELANDAAALGDALATSLEQKQYALGQRR 593 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 Q Q L A L+ ++ + Q I+ Q+ Sbjct: 594 EACQNAKAAQQSLQA----------------LEHELEQLDNTQKQLLADIDGLQRQRDQH 637 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 +++ + Q + Q L AL I+ L+ +E L Sbjct: 638 SGELQKACGEQESLAGAMPELCQRLGNEQAFDAHLAALSQDIEALSGQMEKLQTQLSDAQ 697 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 +T E + LQQ A A+A+FDT L A F+D +F Sbjct: 698 IRQTQCNER--------------RAALQQTLSEARSREAAAKARFDTELAAKGFNDVVSF 743 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 A M + + + Q + + E+L + AL + Sbjct: 744 NQARMTADDMGDAKSRIATWQQQLAGLKERMAAQQESLGDVLPPDLTELAALETAAQDGF 803 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 + Q Q L + R QL +A+ A++ ++ G L+ Sbjct: 804 NQCNQQWQVLNDTQVMYSRARAQLGTEAEVA----------ARLDEEYAVVGTLSDAASG 853 Query: 890 KEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEVEVVDT 939 G + ++F G+ LD+++ A+++L R+ GRY L R+ + L++EV D Sbjct: 854 MTGARISLQRFVLGVLLDDVLIEASERLHRMSKGRYRLLRREDKAKGNRASGLDLEVEDA 913 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDT 996 + +R TLSGGESF+ +L+LAL LSD+V + ++D+LF+DEGFG+LD ++L+ Sbjct: 914 YTG-KLRPVATLSGGESFMAALSLALGLSDVVQAYAGGIKLDTLFIDEGFGSLDQDSLEL 972 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 A+ L L +SG+ IGVISHV MKE+I ++ + K +L Sbjct: 973 AVRTLVDLQSSGRMIGVISHVTEMKEQIQTRVDIHKDTVGSQIRL 1017 >UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP63_9BACE Length = 1037 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 198/1095 (18%), Positives = 385/1095 (35%), Gaps = 125/1095 (11%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 + S I+F R GLF ITG TG+GKTT+ DAI ALY ET + Sbjct: 1 MSAFGSYADRVTIEFDR---GREGLFLITGDTGSGKTTIFDAIMYALYDETSGGNRSGNM 57 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN--------LQVPRVELARC 119 + E FE Y + R N + P V L Sbjct: 58 MRSQYADADTDTWVEFTFEYGNNIYSVRRNPEYIRQSKRRNADGSARYTTEKPDVTLT-M 116 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 DG K+ + GLD +F + +++QG F L A +R E+ + T Sbjct: 117 PDGSEFTGNKKEVNGKIVEIIGLDAKQFAQVAMIAQGDFMKLLYADSDDRREIFSRIFRT 176 Query: 180 EIYGQISAMVFEQHKSARTELEKLQA--------------------QASGVTLLTPEQ-- 217 E Y +I + ++K+ +LE + Q E+ Sbjct: 177 EDYQRIQYELQARYKNIYGQLEDNRKIYDSRIGQIKVTEAYNERYRQLCERKEPDYEESL 236 Query: 218 -------------VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQ 264 SL A LT + A + +Q+ + D+ E +Q Sbjct: 237 TLLGDIIASQQSLYDSLNAEKDELTGQRDNNNAAIGRAKQTNSLFDEYDKAAAETLDIEQ 296 Query: 265 ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTM 324 QA + + A ++A E++ + + + I+E RL Sbjct: 297 RRPQADGMRRELEAAKRAAAVAVLDDKRTDAEEKLRQSEKRVKELATWIDEAAKRLDRQS 356 Query: 325 ALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ 384 A + I + +L+ Q + + + ++D F + +F + ++ L Sbjct: 357 AELSGISAVYNDECPKLRLQAEEIRKSIPDYDTF-------GSRKKEFDALNNRKKDLNN 409 Query: 385 WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 + L E++L+ A +TA + A L ++ I ++ L + Sbjct: 410 QKAAL---EEELSRQKAYQDGITAFQNGNA--------DCMVRLEKVNNTISDKKDTLDR 458 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK---TICEQEARIKTLEAQRAQLQ 501 ++ I+++ ++ + + Y + E QL+ Sbjct: 459 IR-KIEDLQEQLLKMRKRHEQKSSEYLNARNEYEHASACYERLEALFMSGQAGILARQLE 517 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 G PCP+CGS HP A+ + V Q+ + K + + + Sbjct: 518 DGMPCPVCGSVIHPNPAAFNNED--VTQASVDEARRSRDKADAARQNMYTETVIAKSECD 575 Query: 562 RDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 ++ EQ++ +IT L + D +E + + Sbjct: 576 ------NQIKLIEQSIQSVMGDDGQDEDITGLKLKTEKELTDVGEEMRKLNETARIYRDN 629 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + ++ + +++ + + A + L Sbjct: 630 EDKLKKLTSDLSDMSVRVDSLKNEISQDEVQLAHMESEISALSKNLR------------- 676 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + + I++ L E + ++ + Q+ Sbjct: 677 ------YSDRSEAEKIMKELEDRIAAVEKSWLSRQELVANLQKELAGKRGEADNEQKGAE 730 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 ++ + A ++++ F + + A D+ + LE + R+ Sbjct: 731 KLRETYEAACRALADSVESEGFASEAEYKEAKRDKVAMAVLEAGIAEYD---REVADNAV 787 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + AQ D ++ + + + + +RE + GE+ ++ + + Sbjct: 788 KIKTLAAQIDGKMRVDT-------QEAEAAVVRIEKLIREKSGHMGELYADIRANQEIAD 840 Query: 862 QQQTLMQQIAQMTQQVEDWGYL-NSLIGSKEGD---KFRKFAQGLTLDNLVHLANQQLTR 917 + + ++ A + + L N+ GS G F F ++ AN++L+ Sbjct: 841 EFAKMSEERAGAMHKYRIYATLYNTANGSLTGSVKINFETFVLRQYFKKIISAANRRLSA 900 Query: 918 LH-GRYLLQRKA---------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 ++ G++ L + L+++V D ++VRD +TLSGGE+F+ +LA+AL + Sbjct: 901 MNDGQWCLMCRDIDNIDNKGRKSGLDIDVHDELT-NSVRDVKTLSGGETFMAALAMALGM 959 Query: 968 SDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 SD++ ++ R+D++F+DEGFG+LD + A++ L L + IG+ISHV +KE+I Sbjct: 960 SDIIQNRTGAVRLDTMFIDEGFGSLDDYSRQQAINILKGLADGRRMIGIISHVTELKEQI 1019 Query: 1025 PVQIKVKKINGLGYS 1039 Q+ V K G G S Sbjct: 1020 ECQLVVSKT-GRGSS 1033 >UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM48_SYNFM Length = 1020 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 219/1064 (20%), Positives = 401/1064 (37%), Gaps = 87/1064 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L E DF F I GPTG+GK+TLLDA+C ALY ET Sbjct: 1 MRPLKLTLSAFGPYASEQVFDF--RVLGDRSFFLIHGPTGSGKSTLLDAVCFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV------ 114 + R + +F + YR S + R + G V + Sbjct: 59 GERDVRHLRSDYARASTPTRVTFDFSLGEAVYRITRSPEQERPRARGEGTVVQRPAAVLH 118 Query: 115 ----ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 + +G +LA + + L G +F + ++L QGQF FL A +ER Sbjct: 119 DRTGLVDESREGALLAGQWTRVTDRMEQLLGFKSSQFRQVVMLPQGQFRKFLTADSRERQ 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEK--------LQAQASGVTLLTPEQVQSLT 222 +LE L TEIY +I V E + + LE L+ A E ++ Sbjct: 179 AILEVLFQTEIYRRIEEAVKEAAREIQHALEDLGKRRRLILEQAAVESERQLAEAMEGFA 238 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 A L+ L + + L ++ +++N + EA+R Q + + + + Sbjct: 239 ARLEALGGQVEALKKSEALANEAVNKGREIRRILDEAARAQAEFAALEKRKPEIEDRRVK 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 L A+ A LR +A ++ ++ A R + A + Sbjct: 299 LDRARKAAGLRGVEANLAAREKEFGDASVRVRTAEIEIEKARAARQAAEAALAGEREREG 358 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 +++ + +Q Q A R+ + E + + + A ++ A Sbjct: 359 EREAARRDVVQLTAMIDQVRELEAA-RSDLGGMKARVERVERLRGLRAAALERCRIEMAE 417 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + A A+ + +RQ + I + L +A+ + + + A Sbjct: 418 AGAALEETEAQAVHAERYRLEVRQAAASYRATIRLKTSE-KHLALALAHRKKTEAAAGTA 476 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 L + + D E + L +L G PCP+CG+T HP+ + Sbjct: 477 LAVLTD-----ARTALDGMEREWLEGQAAILA---GRLADGLPCPVCGATDHPSPARHGG 528 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 P E KK L + + + +R E +L+ L + Sbjct: 529 ELPT---------EAAHKKARTHARELESRYEKARLESERANLEVAALQSAAANLRAEAG 579 Query: 583 AVTASLNITLQPLDDIQPWL-DAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 V A + D++ L DA + +Q + + A ++ ++++ + Sbjct: 580 EVPA------EGFRDLKTRLRDAWARFRTAVAARAQVTDRAVALKAVEERTAGNEKRLRR 633 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + L + E E + R ++ ++ + ++ Q R++ L E Sbjct: 634 LENGLRAAVRRMDGQAAVMAEREGKVPDRLRDLKALE---RAISTAQKRLRSLLDAQEAA 690 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 E E R E + + + +++ L L Sbjct: 691 RARQEAAAARAAACEETLRNAVEALESAKERAGSCREELRL--------------RLAEE 736 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F + + AA +D + + ++E+ + + R A+ + + + Sbjct: 737 GFSSVEDYRAAKLDRKDVDRMEREIADFHGRHRAARERLDRAVAAAQGLE---------- 786 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 T +E+++++ + + LR G +R Q Q A L ++ + G Sbjct: 787 TPVLEELERKAREASEALRSAIARHGALRAQSDQLARWNADLHKLAGEMEAAQNRYGIVG 846 Query: 882 YLNSLIGSKE--GDKFRKFAQGLTLDNLVHLAN-QQLTRLHGRYLLQR-------KASEA 931 ++ + K G F++F LD+++ A+ + GR+ LQR +A+ Sbjct: 847 RISEVANGKNAPGLTFQRFVLAALLDDVLDAASRRLRRMSRGRFDLQRSRERGDQRAAAG 906 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L++ V DT+ R TLSGGESFL SLA+AL L+D+V + R++++F+DEGFG+ Sbjct: 907 LDLAVYDTYTG-TTRPVNTLSGGESFLSSLAMALGLADVVRAYAGGIRLETIFVDEGFGS 965 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 LD E+LD A L L + +G+ISHV ++ER+ +++V Sbjct: 966 LDQESLDLAFQTLVDLQEGNRLVGIISHVPELRERVDARLEVIP 1009 >UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXJ7_9BACE Length = 1144 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 291/1139 (25%), Positives = 503/1139 (44%), Gaps = 115/1139 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L ++N+ S+ + IDF P + +F I GPTGAGK+TLLDA+CLALY+ TPR Sbjct: 1 MKLQKLIIENIASI-EKACIDFEHGPLGEDSIFLICGPTGAGKSTLLDAVCLALYNTTPR 59 Query: 61 LSNVSQSQ-------------------NDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNR 100 L + + LM RD+ E+ F + G+A RA WS R Sbjct: 60 LKQAANERYLDENDSFSGTGEVSIDDSRMLMRRDSVSAQVELWFTDAAGDALRAVWSVAR 119 Query: 101 ARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 ARN+ G +Q L+ DG L +K + GL + +F R+ LL+QG+F Sbjct: 120 ARNKAGGKIQKVVWTLS-LQDGTPLTNKSTETRTEIERRIGLTFEQFCRTTLLAQGEFTK 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL +K +E++ +LE+LTGTEIY +IS ++ EL++L+AQ G+ LLT E++ + Sbjct: 179 FLKSKEEEKSNILEKLTGTEIYSRISREIYVMKTEKEAELQELKAQTGGIVLLTDEELAA 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALA--EEEKAQP 278 L + +T+E L T +QEQ W+T + +L + +ALQ E E + Sbjct: 239 LQTEQRQVTEETATLRTQLKQEQDLRKWMTDEQKLAHDLEETGKALQSLTERVESEDYKR 298 Query: 279 QLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS 338 + L ++R W A + +++E++ + S + Q Sbjct: 299 NKSLLDDWDRTADVRFQWTEQAALQQRIRTSEKELEQLKEKYCSLSTGLGQL-ERMQVQC 357 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 E ++ T +QE + + Q + E R+ + QK Sbjct: 358 REQWAACETYLTGVQEKVPVYESLQSLSALSDQIQRALQQSEDYRKEKAHKGAIHQKTLE 417 Query: 399 LAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ-- 456 + T A + E R L L + + Q+K+ A ++ +E Sbjct: 418 VRQGATTSYEQARKVAEEKQQEVAACRTQLEELQVEELRQKKQEADARLDGWKKLREALS 477 Query: 457 ------------TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKT------------ 492 + L + ++ ++ QL +C +E Sbjct: 478 VRAEKEQAWLDVQKNRKTLQDDCRQQQQTVAQLKAQAEVCRKEKEEVQQVYDKQRMSCED 537 Query: 493 -LEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG 551 RA+L G CP+CG +++ +A + + LE + +++ E L Sbjct: 538 WAREARARLSKGDVCPVCGKEVGDDLKS-EAHFVSLLEPVRALLEEKARRVEEVLTALAR 596 Query: 552 QLDAITKQLQRDENEAQ-----------------------SLRQDEQALTQQWQAVTASL 588 + ++ +E EA+ ++++ ++ ++Q QA+TA L Sbjct: 597 AEAEVRSLMRLEEMEAKKETAAKEAYFLAEKAVADMPLYATVKEADEVVSQVEQALTAQL 656 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ---QIEQRQQL 645 + + W A++ +R RL +R EL ++++ + + ++E ++ Sbjct: 657 EVCDRL---EAQWKQAEEGQQRLNRLTKEREELTTASEQWHRKVEEADKAVSRLETELRM 713 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ-QRQNELTAL----------QNRIQQL 694 L L+ ALT+ Q E+ L ++W+ R+N +TAL Q R +QL Sbjct: 714 LEEALSREALTVSQCVEKGEILIVFTPWQEAWKTDRENFITALKKETNRYVEQQTRREQL 773 Query: 695 TPILETLPQSDELPHCEETVV---LENWRQVHEQCLALHSQQQTLQQQ------------ 739 + +E+L E + L W Q + + + L Q Sbjct: 774 SHKVESLASQVEQVQSVRQSILSELPAWGQATAETIPDGPCPEGLPGQWNALNTSVLSVC 833 Query: 740 -DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL--MDEQTLTQLEQLKQNLENQRRQA 796 + +Q L++ ++ A + + +L L ++ + + + Q L+N Sbjct: 834 HAIKTSQKLREEKSAGVEAFLVGHPEISREYLEKLAGLEVEKVNMARRTLQKLDNDLTSR 893 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 + + + LAQH+ RP + +T + +++ +++ ++ G I Q L Sbjct: 894 RAEMERVGRELAQHRAQRPSETEGMT--LATVEETISRLEEQQTGKLARLGAIAQMLAHH 951 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 + Q+ + + +QI ++V++W + +L GS +G KFR AQ L L+ AN L+ Sbjct: 952 EECLQRIRKVKEQIEVKQKEVDNWAGVAALFGSADGKKFRNIAQSYVLRQLLAGANHYLS 1011 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 RL RY ++ L + + D +Q R T T+SGGESFLVSLALAL LS L Sbjct: 1012 RLTDRYRMECPPG-GLTILLRDEYQGGVKRPTSTISGGESFLVSLALALGLSSLNRKSLS 1070 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +D LF+DEGFGTLDS+ L+T ++AL+ L+ GK +G+ISHVEA++ERI QI V+++N Sbjct: 1071 VDVLFIDEGFGTLDSDYLNTVMEALEKLHQIGGKKVGIISHVEALRERIATQIHVERVN 1129 >UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I3_9CLOT Length = 1044 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 194/1075 (18%), Positives = 421/1075 (39%), Gaps = 81/1075 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L + ++DF +F ITG TGAGKTT+ DAI ALY E Sbjct: 1 MKIRKLIITGFGPYAERQELDFESS-LDGKNMFVITGNTGAGKTTIFDAINFALYGEASG 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ + E+ F ++ + Y S R + G+ A Sbjct: 60 SERDGKNLRSDFADKSTPTEVELWFSLRNKEYYIKRSPQYFRAKQRGDGFTESKPSAEIK 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G K+ L + G+ +F + +++ QG+F LN+ ++ E+ ++ GT+ Sbjct: 120 IGDKTVSGPKEVTRLVEEILGITCEQFKQLVMIPQGEFKKLLNSDSDKKEEIFRKIFGTK 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 ++ I + + + + +E++Q ++ + A D+E + I + Sbjct: 180 VFSDIQQNIKLEANNLKKSIEEIQR----------DRENRIKAFACKEDDDELRRIVNAK 229 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 L +D + ++ + ++ + L LA + E+ Sbjct: 230 DLNIELILSKFKDAIDKDEAEENIIKEKLKDINIEINNISKELVLANDINKKIDNLEKYK 289 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASI--RHHAAKQSAELQQQQQSLNTWLQEHDRF 358 L ++ + E +L+S + ++ L + ++SL ++ +++ Sbjct: 290 CDLDKLNLLKHEYEVKTIKLESGKKAVTVLGFEDKYKEKKLSLLKAEESLRKSIENLNKY 349 Query: 359 R----------QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + + NE + ++ + E L++ ++KL+ L + Sbjct: 350 KKEFDDAERKLKIENEKEDLKNDLRKKIDEIEKLKEKASIYQSNKEKLDKLMKES-QYII 408 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + + ++ L + L I ++ + L + N T +Q + N L+ + + Sbjct: 409 ERIKQIDIDRNKKNDLLKLLSEELENINKLKEEKSNLDIKEINYTSKQEKLNKLLSALEK 468 Query: 469 -------------RYKEKTQQLADVK---TICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 Y+ ++ D K E+ R L G+ CP+CGS Sbjct: 469 CKLESQRHVKGTAFYENADKEYNDKKKNYEKLEEAFRRNQAGILAKGLIEGENCPVCGSI 528 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP + ++ E VK+ + ++ ++L + + E SL++ Sbjct: 529 HHPKLATIESGNIN---------EAAVKESKALADKFYEKRESYYRELTKIQAEISSLKE 579 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 + + N + + + + ++ + + +++S++ E++ ++ ++ Sbjct: 580 ETIKPIFIEVFNKENFNDDI-EISIEKVKFELKNNYSQLDKVISRKKEIEKVVSLELTKL 638 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 Q ++++E+ + L L L ++ E T + Q +E ++ Sbjct: 639 KQ-KEEVEKYTEELRIDLENKNKELLAKEGELKIQET------NLQNIVDEFKGTIRNVK 691 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 L + + E + +N+ + + + +L++ A L+ A Sbjct: 692 DLEEEQLKVKGTLEKLKEDYLKAEKNFNNIKTIYDKENGNKSSLEKVTENAKLELEDALK 751 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 F + F++ + ++ M + + +LE+ A+ + + E Sbjct: 752 LFKEKVLELGFENYNDYSSSRMTQVEIDELERDINKFNIDLSNAERVYNLSLEECKDLN- 810 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + V I++ L + S+ EI ++ Q+ + + I Sbjct: 811 ---------KIDVRNIEEALEVKSNEKINLDKSEKEIYLRISQNKRIVGECINYSKLIEA 861 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR--- 926 ++ + G L +I K F ++ ++++ AN + +++ R+ L R Sbjct: 862 DEEKYKTVGKLAKVINGDNPRKISFERYVLAAYFEDIIEAANIRFSQMTCNRFELLRKEE 921 Query: 927 ----KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 + + L++EV D + + RD +TLSGGE F SL++AL L+D+V S ++D+ Sbjct: 922 LGDKRKGQGLDLEVFDNYTGKS-RDVKTLSGGECFKASLSMALGLADVVQSYSGGIQLDT 980 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +F+DEGFGTLD E+LD+A++ L L G+ +GVISHV+ +K+RI +++V N Sbjct: 981 MFIDEGFGTLDPESLDSAIECLIDLQDDGRVVGVISHVQELKDRIETKLEVSSTN 1035 >UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroides RepID=C6I6N0_9BACE Length = 987 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 285/1055 (27%), Positives = 490/1055 (46%), Gaps = 101/1055 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL S++G ++IDF EP S G+FAI+GPTGAGK+T+LDA+CLALY +TPR Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 Query: 61 LSNVSQSQN---------------DLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQ 104 S +S +++ R T E AEV+F G YR+ WS R ++ Sbjct: 61 FSASVESLYMSDIGESRVNQADVKNILRRGTGEGFAEVDFLGASGHCYRSRWSVRRTGSR 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G L+ +++ + L K+ L TL GL Y +FTR++LL+Q FA FL + Sbjct: 121 ANGALRSQTIQVTDLTANQELQGTRKELLAQLVTLVGLTYEQFTRTVLLAQNDFATFLKS 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 + +AELLE+LTGTEIY +IS+ ++ + K+A EL +L++ A+ + LL+ E++ L Sbjct: 181 RESAKAELLEKLTGTEIYSRISSEIYLRSKTADAELNQLKSNATLIELLSEEEITLLRTE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 + LT+ +Q A L+ L Q++ ++ Q ++ + +K + + Sbjct: 241 KESLTNLREQGSKALIDLNAQLSVLHTLKLQQEQRDKKVQDMRLDEEKSKKLREEYTR-- 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + R E + + + QI+ + ++ + + Q+ +LQ Sbjct: 299 QSDSLIRFRGQCEAVQPDLSRARELDVQIQSLVSQSKQVEEILQGAEKAVNAQANKLQSV 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK----LNALA 400 Q +L+T P S R L++ + QL ++K +N L Sbjct: 359 QGALHTSCHSLKNLTGEIELPVTEETGLF-LESVRNRLKEQEDQLAILQEKNEARVNRLN 417 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 A + DE A + + + RQ ++ + +L+ + + +Q Q Sbjct: 418 AFGIEAVTDEQARWMQEQTRLQNARQQMLEWRKAGTEAE----RLKAQQEEMGHKQEQMR 473 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQE--ARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + + R EK +L ++ + E A K + R L+ +PCP+CG T HP Sbjct: 474 KEITLLTTRLSEKEAELKVLQRLFENARIAMGKDVRTLRQNLRENEPCPVCGGTDHPY-- 531 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 NE + + + + + + Q+ N +L+QD L+ Sbjct: 532 -----------------RNEEQVVHSLYQNIEQEYQTASAEYQQLNNRNIALKQDLLHLS 574 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 + +T L LQ + +P + + + + L H +QG++ +++ QY Q Sbjct: 575 ELSGEITVQLQAFLQEAEQKRPSSEEEQNPDYFEKQL---HTVQGKLNLLAEKMHQYHQL 631 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 ++ QQ E + T + ++ ++ L ++ Sbjct: 632 YKEWQQ------------------HEGQIRTARSACEALREGVARCHLLMQQVLAAKEQF 673 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 EL ET E +R V EQ + L ++ L + + + + A + + L Sbjct: 674 -------ELLKTAETTAREQFRVVSEQLITLRQERAPLLK--GKSVEDAEAAIRKKEKQL 724 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 SV EQ + E+++ + + + + L + E + + +Q Sbjct: 725 NDSV-------------EQVRKEGEEVQSRISGMQGEIRQLNSSIDELMLRKEQIADP-- 769 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 E + + +A+ +E + +L Q NR++ + L Q++ + + Sbjct: 770 -------EHLPETIARRQATNQETERRLSTVEARLLQQEQNRKKLKQLEQELTEKQETAN 822 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVD 938 WG LN LIGS +G KF+ AQ TL+ L+ AN+ L+ L RY LQ+ L ++V+D Sbjct: 823 RWGKLNKLIGSADGTKFKVIAQSYTLNLLLMHANKHLSYLSKRYRLQQVPG-TLALQVID 881 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTAL 998 D VR +LSGGESFL+SLALAL LS L S+ +++SLF+DEGFG+LD+++L T + Sbjct: 882 CDMCDEVRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSLDADSLRTVM 941 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKI 1033 +AL+ L G+ IGVISHV+ M ERI VQ+++ + Sbjct: 942 EALEQLQMQGRKIGVISHVQEMSERIAVQVQLHRA 976 >UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE Length = 1018 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 248/1089 (22%), Positives = 461/1089 (42%), Gaps = 119/1089 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ IDF E N LF I GPTG+GKT++LDAIC ALY ET Sbjct: 1 MKPIKLTMQAFGPFAKTEVIDF--EKLGRNPLFLINGPTGSGKTSILDAICFALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 ++ +EF + G+ YR S + + G ++ L Sbjct: 59 NERQGIQMRCDLSAQDLPTEVVLEFSLHGKQYRVVRSPEQEAPKARGEGMTVKKHTAALY 118 Query: 118 RCAD-GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + K++ K + + GL+ +F + M+L QG+F L A KER E+ +L Sbjct: 119 ELGETEKLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT-----PEQVQSLTASLQVLTDE 231 T+IY +I + ++ + ++ Q G + E + L + + L + Sbjct: 179 FQTDIYKKIEYALKDKASAISKAKDEFDNQIRGALQVAGVSSEQELLHQLEQATEQLEVD 238 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQA---LQQALAEEEKAQPQLAALSLAQP 288 K+ + + + + L + + + E S+R+QA L+ L + + + L A+ Sbjct: 239 RKKEQASLDKLNVAKSELQKAETINGEFSKREQAENALKLHLEHSDSIKVRQQQLENAKN 298 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 A + + + +RQ+I + L A+ + E + QQS Sbjct: 299 ANKIELPYVALQNAKTQTQELRQKIVALKESLDKANAV-----------TKEKENLQQSA 347 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + + Q + + + ++ + + QQ E L + L A Sbjct: 348 KEAAAKVPQLTQLQYQLESMKDKLVEKANLERKITAGHQQKQQFEATLKQYIELKDKL-A 406 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQ------VAIQNVTQEQTQRNAA 462 + + R + ++ +I +Q+ L LQ + + +T + + Sbjct: 407 FQAQQGQKDLEQARVDVALVGSIDAEIKQKQRLLQDLQKLHGLTLELSKLTALTVSKQQS 466 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 L E QRY + QQ AD + A+ L +L+AG+ CP+CGS +HP + + Sbjct: 467 LQEASQRYMQ-CQQAADTIELKWHNAQAAVLA---QRLKAGEACPVCGSQAHPNLATF-- 520 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 +E V + ++ A + ++ L QL+ + + +N+ L+++ L + Sbjct: 521 VEEVVTKEQVQAARVKEREAQTSLNQLSNQLEQHNVVIIQHQNQIDQLKEE---LGEHAA 577 Query: 583 AVTASLNITLQPLDDIQPWLDAQD--EHERQLRLLSQR--------HELQGQIAAHNQQI 632 + +++ LQ L+D L + D + E+ + L+QR HELQ Q+AA+ + Sbjct: 578 SEISTVQTELQALNDQLLRLQSIDIEKLEKNVEQLNQRCLVGENKIHELQNQMAANESTV 637 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 Q+ + Q Q + + + +++ + +I Sbjct: 638 QANQEHLTQLQASIDPKYSSV------------------------DALERDISLTKEQIL 673 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 L LE + + ++ SQ T +Q + Q L +A+ Sbjct: 674 TLNTGLEKAQNALQQAVLAQSNA--------------ESQLVTNKQWLSESEQKLSQAEL 719 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 ++ ALQAS F+D+ ++L + + + L ++ N + + + + + L ++ Sbjct: 720 AWNEALQASKFEDESSYLNSRVTDDELQAWQKEIDNFKQTQTKLEQTLHDLNHALKALER 779 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 ++ + L + E R ++ R+ TL ++ ++ Sbjct: 780 ----------PDLDSLNDSLTTLQAQYIEVRNQLDTTRSTFERIEKVRKDIATLHEKNSK 829 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA- 928 + ++ + +G L + K G + +F G+ LD+++ A+Q+L+ + GRY+L RK Sbjct: 830 LEEEYKVFGTLYDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTE 889 Query: 929 ------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 L++ V D + RD TLSGGESF+ +LALAL LSD+V S R+D+ Sbjct: 890 GFKGAAGRGLDLMVEDGYTG-KTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDT 948 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 LF+DEGFG+LD E+LD A+ L L +G+ IGVISHV +KE++ ++ V+ S Sbjct: 949 LFIDEGFGSLDPESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRVDVEP------S 1002 Query: 1040 KLESTFAVK 1048 ++ ST +VK Sbjct: 1003 RVGSTVSVK 1011 >UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYF3_CHRSD Length = 1101 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 269/1101 (24%), Positives = 434/1101 (39%), Gaps = 67/1101 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRL NL S+ G ++DFT P GLFAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MKILALRLANLASIPGPLELDFTAAPLRDAGLFAITGPTGAGKSTLLDALCLALYGGTPR 60 Query: 61 LSNVSQSQ----------------NDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARN 103 L + L+ R TA AEV+F G YRA W+ RAR Sbjct: 61 LRQAPGREAPLPDVEGETLNTADPRTLLRRGTASGHAEVDFLGRDGRRYRARWAVRRARE 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + DG LQ L ++L + ++ L GL + +FTR++LL+Q +FAAFL Sbjct: 121 KADGKLQKIEQSLTDLDSDRLLTTQKREFDRLLPERLGLSFEQFTRAVLLAQSEFAAFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A ER++LLE LTGT Y IS + + A+ ++ L+ + + E L Sbjct: 181 ADDNERSDLLERLTGTAEYSAISIAAYRRASDAKRAVDALETRLADDLPADSEARAELER 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 Q E + + + W +L+ Q+ + A A + PQ A Sbjct: 241 HAQQTQAELDAVQRQARHLEAQAQWHATDAKLRDARDHGQREHRDAEAHWQTLAPQRADR 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + R R AE +A + + L + + L Q Sbjct: 301 EWRRLIAPQRHRLTRQAELPHEIARLEKTHAATREDLARAETAQHGATRARDEAEQALAQ 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + R+ + A Q ++ + + L ++ Sbjct: 361 TDAARQHAEPTLRQAREQAQQLATQEQQLAELEQRHAERHRQSEALAARHRQARETQQRQ 420 Query: 404 LTLTADEVATALAQHAEQRPLRQ--------------------HLVALHGQIVPQQKRLA 443 D AT + + L + + Sbjct: 421 RQQRDDWQATLRQSMGDHARVADARQAAQQAHDQAAQRHLALGELHSRWQDVQRADDAHR 480 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK--TLEAQRAQLQ 501 L + TQ + RQR + + V+ + E+ ++ ++ R LQ Sbjct: 481 TLTERLDADTQRRETLLTQGQAARQRRDDCDRHYRTVREMVERNRAVRSESVTRLREHLQ 540 Query: 502 AGQPCPLCGSTSHP-AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 GQPCP+CG HP + E ++ E ++ + + + Q D + Sbjct: 541 DGQPCPVCGGLDHPWRHAPPASPESAQLAAQQAEEERQLTQAQQALDDAQQQRDELLGHY 600 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 + E RQD ++ QA +L+ L ++ + +R Sbjct: 601 RALETSLTQQRQDLADADKRRQAAHRALDAH--ALGAELAAIEPPARDDWLVRQRQDADA 658 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 + Q A + Q ++++E + L + A Q + LA + ++ Sbjct: 659 TRQQHAHLLHTLSQAERELEPLDEALRQSELTLAQLDAQRTGLDQELAQLTERLPPLREA 718 Query: 681 Q----NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 + +L L ++L + + L + L Q Q Sbjct: 719 RDACAAQLAGLLGEHASPDAWQQSLDAARDSARQARDAALTRLHDAQQHRQTLAQQAQHE 778 Query: 737 QQQ---DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 ++ L + A++ D E + + E+ + E R Sbjct: 779 SERLDALRDEKSILDRDLAEWRAM--HPDLSDALLERLLAQTEDEIQRQERQLEETERTR 836 Query: 794 RQAQTLVTQTAETLAQHQQHRP---DDGLALTVTVEQIQQELAQTHQKLRENTTSQG--- 847 ++ + + + + L H++ + +D + + + E+A+ L Sbjct: 837 QRTEATLAERRQALIAHRRDQELVAEDADETALLGDAAEAEIARRRLALDHAREELAPRH 896 Query: 848 --------EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 L D R++QQ ++ + WG ++ LIGS +G FR+ A Sbjct: 897 DAAQAARDHAAHALHDDDRRRERQQAGQAELEAARHEYRRWGRISELIGSADGKVFRRIA 956 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 Q L+ L+ AN L L RY L R SE L + V+D D R +LSGGE+FLV Sbjct: 957 QAYNLEQLLEHANAHLQGLSRRYRLMRGGSE-LGLLVIDHDMGDERRSVHSLSGGETFLV 1015 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALAL L+ + S + I+SLF+DEGFG+LD ++L A++ALD L A G+ +GVISHV+ Sbjct: 1016 SLALALGLASMASGELTIESLFIDEGFGSLDPQSLALAMEALDGLQALGRRVGVISHVQE 1075 Query: 1020 MKERIPVQIKVKKINGLGYSK 1040 M ERIPVQI+V+ + G G S+ Sbjct: 1076 MHERIPVQIQVEPL-GNGTSR 1095 >UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW11_DICNV Length = 988 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 295/1045 (28%), Positives = 462/1045 (44%), Gaps = 67/1045 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I S+R NLN+LKG W+IDFT + +FAITG TGAGK+T+LDAICLALY +TPR Sbjct: 1 MRIESVRFHNLNALKGAWQIDFTAMA---DDIFAITGATGAGKSTILDAICLALYGQTPR 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ N +M R AEC AEV F + G+ YR FW QNRA + DG LQ P+ ++ Sbjct: 58 LGKITTKDNQIMNRSRAECGAEVVFFIAGKRYRVFWRQNRAYGRRDGKLQEPQHYISDAE 117 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G I+ +K+ A +T LD+ RFTR++LL+QGQFA FL AK +ERA +LE++TGTE Sbjct: 118 TGVIIEEKLSRTAAKVAEITHLDFARFTRTVLLAQGQFATFLQAKGEERAPILEQITGTE 177 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V ++ + L + S ++L++ E++ A Q L D A Sbjct: 178 IYSEISIAVQKRFAREHDDFSVLADKMSRISLVSAEEIARWQAEEQQLMDSICAQQKAAD 237 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++ + LQQEA Q L + + P+ A + Q W+ Sbjct: 238 DWRNAVHIHQQLHTLQQEAHATQTRLAEIDKKMNALLPEQARFAQYQKVSAGAALWDAFM 297 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A +Q + + + + A+ A Q QQ + RQ Sbjct: 298 RTQTRCAEQQQLVNNSAALAKKAAEQVKNAQIARAQAEAVWQNAQQKEEAAQPLLNEARQ 357 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + A R +R+ + + + E AL A + E + + Sbjct: 358 LQAQIAALRI------YERDFPKTLPEMVLRVEVAEAALNAALAQKSKQEYWSRQNCLLQ 411 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 ++ + Q + QI K ++ Q Q A L + +++ + D Sbjct: 412 RQHVLQDFQQKYQQITALNKTQQDVRQQWQETAQRLQAVQADLAQKTMHWQQNKARAEDK 471 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + I + +IK+L QR L+ G+PCPLCG+ HP V+ + E + Sbjct: 472 RQIYDLSLQIKSLNEQRQLLRTGEPCPLCGAREHPF---------AVSMPDMTTAEQLWR 522 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +E + + + +++ + QQ A+ L I + L Sbjct: 523 AAQQEAEAADEARQQLAQLALQLMERCAQIKEQSLIIEQQISALRQELVIFERDLSF--- 579 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + ++ ++ A + Q Q++ + A ++ Sbjct: 580 ----------------RAADIGREMEAVKTDLAQVVQRLTLIDEAEKNLAAARAQAFFEK 623 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 + + L Q + +Q Q L A R Q E DEL ++ Sbjct: 624 KAKFAQLLG-GQTIEDYQAAQKRLLAECERGYQAAQQAELAQIKDELAQRA------AYQ 676 Query: 721 QVHEQCLALHSQQQTLQQQ--DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 + + +Q +Q+ LAA + A A F+ + +A L + Sbjct: 677 RDAALLMQAQQEQTAAEQEFMQFLAANGFEHRAAFEALQAAARDFERVEQQMAQLT--EE 734 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 Q + + L ++ +AQ + T + A Q H +T + + Q++L + Sbjct: 735 KKQQQWQLETLCDRVNKAQQGLPDTMKDAAVCQTH----LQTITSALAKAQEDLGAVRAR 790 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 R+ Q E L ++ + V+ W L LIGS +G KFR F Sbjct: 791 RRQQENEQAE--------------NAALKERYQRQDAVVQRWQRLYDLIGSSDGKKFRNF 836 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 AQ LT + ++ AN+ L ++ RY LQ + L + VVD WQ VR +R LSGGESF+ Sbjct: 837 AQSLTFEAMLLEANKVLAKMSDRYQLQAEMEPPLSLVVVDLWQGGEVRSSRNLSGGESFI 896 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVE 1018 VSLALAL L+ L + R+DSLFLDEGF TLD++ LD ALD L ++ SGK IG+ISH+ Sbjct: 897 VSLALALGLAALSGREARVDSLFLDEGFATLDAQALDVALDTLASIQMSGKMIGIISHLP 956 Query: 1019 AMKERIPVQIKVKKINGLGYSKLES 1043 +KER+ I+V G G S+L Sbjct: 957 LLKERVSTHIQVI-AAGNGISQLRG 980 >UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroidales RepID=A6LCR2_PARD8 Length = 993 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 299/1067 (28%), Positives = 481/1067 (45%), Gaps = 99/1067 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L++R +NL SL+GE+ IDFT EP AS G+FAI+GPTGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MRVLAIRGRNLASLEGEFSIDFTEEPLASAGIFAISGPTGAGKSTLLDAMCLALFSRTPR 60 Query: 61 LSNVSQSQ----------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARN 103 ++ L+ R TA AEV+F + G YRA WS +RAR Sbjct: 61 TELAKENNVRLRDVQEDVLPQSDPRFLLRRGTASGYAEVDFVALNGCRYRARWSVSRARE 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + G LQ R+ L GK KD L GL + +FTRS+LL+Q F+ FL Sbjct: 121 KESGRLQAARLTLYNIDAGKEEPGTNKDLQARIIELIGLTFDQFTRSVLLAQNDFSTFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A+ E+A LLE+LTGTE Y +IS +F ++ A+ E+L A+ + LL+ E+V++ Sbjct: 181 AEQGEKASLLEKLTGTEQYSEISRRIFAKNAEAKEAYEQLYARVQDIELLSEEEVEASQT 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 L L E +L A+ + +QSL + E+Q + +Q+ E A + + Sbjct: 241 RLSALEVELARLEKARAE-RQSLREAVKAAEVQIASKEKQREENARFLERALASLETSRK 299 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q L R E S L QQ +++ +L+S + R+ S Q+ Sbjct: 300 EYEQGEVRL----ARTDEESKGLRLELQQARKLDVQLESALKARSEADERMKDFSRRKQE 355 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 ++ L + + + ++ WR ++ + E L L H + L A A+ Sbjct: 356 AEEKLRKVEERQKKASEEWDKLTSWRERYRSKEGIAEQLSAL---LIHLDTCLTARRAVE 412 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 +D+ A+ Q ++ +R+ + + +++ + +E+ AL Sbjct: 413 ---RSDKALLAIRQKIQRLEVRRQSLRREAETHAKEQ---------VKIEEERKSVALAL 460 Query: 464 NEMRQRYKEKTQQLADVKT---ICEQEARIKT--LEAQRAQLQAGQPCPLCGSTSHPAVE 518 E+ +++ + + + EQ + T +++ R +L AG PCP+CGS HP Sbjct: 461 QELEPEALDRSIETCRTERERLLLEQAQFVTTGDIKSLRDKLTAGTPCPVCGSLEHPFAS 520 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 R+ +K+L + ++ + + +L+Q E L Sbjct: 521 HEAHERLLALADRISEATLRLKRLLDRK-----------ERQEACGKQLAALQQKELELH 569 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 +Q A + + L +Q L QI + Q++ Sbjct: 570 KQLAADENA-----------------------RTELRNQLQSLSEQIDREELDKREQQEK 606 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 + Q A + ES+ T A+ WQ L L+ Sbjct: 607 LSQSLSAANALFGNDAWQTGWNKDPESFRETLTDFARQWQANGERLRELERERSAHQAER 666 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL--QQQDVLAAQSLQKAQAQFDT 756 E+ + + + + ++ L S++ L Q ++ + + Sbjct: 667 ESYEAFLPPLRKQYEDAAKAYDEKNQSYTRLRSERNLLLGGQPADQVERTFHERVEALKS 726 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 L+ + A EQ EQ+K++L + + +Q++ Sbjct: 727 HLKQLQ---ESTTRHAGEVEQYRGGTEQIKKDLAETSGLLSARRQELDNWMVAYQEN--- 780 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 E + L E T + E +L+ +N+++ Q++++ Sbjct: 781 -------------SEGKTLEESLSEMTAQKSECSFRLRTHEENKRKIAGFQQELSERRAM 827 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEV 936 E W LN L GS +G KFR+ AQG TLD L+ AN QL +L RY L+R + L ++V Sbjct: 828 SERWAKLNELAGSADGAKFRRIAQGYTLDVLLSYANVQLRQLSRRYRLERVP-DTLALQV 886 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDT 996 +D D +R +LSGGESFLVSLALAL LS L S++ +++SLF+DEGFG+LD+ETL Sbjct: 887 IDQDMCDEIRTVHSLSGGESFLVSLALALGLSSLSSNRMKVESLFIDEGFGSLDAETLRV 946 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 A+DAL++L G+ IGVISHV+ M ERIPVQI+V + G G S LE Sbjct: 947 AMDALESLRTQGRKIGVISHVQEMTERIPVQIRVNRA-GNGRSYLEV 992 >UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48FW7_PSE14 Length = 1214 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 334/1216 (27%), Positives = 507/1216 (41%), Gaps = 177/1216 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL G ++IDFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQPD 106 LSN+ QS+ L+ R T AEV+F + YRA W NRAR+ Sbjct: 61 LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT 120 Query: 107 GNLQVPRVELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 LQ R L ++L+++ ++ +L GL++ +FTR+++L+Q +F+AFL A Sbjct: 121 KKLQASRQILTDLDSEQVLSNQSKREFEQLIEHRLGLNFEQFTRAVMLAQSEFSAFLKAD 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 KER+ELLE+LT T IY Q+ + + K A L+ L AQAS + L PE + L L Sbjct: 181 DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPELLAELEQRL 240 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL---QQALAEEEKAQPQLAA 282 + K Q+Q + WL L+ E Q+A+ QQA ++ A+ L Sbjct: 241 NDAQQQLKAHQAQQRQLEIKQQWLIELHRLRDEQLAAQEAITRAQQAWDDQSGARQTLGQ 300 Query: 283 LSLAQPARNL--------------------------------RPHWERIAEHSAALAHIR 310 L P R+ R R + A+L + Sbjct: 301 LERLGPQRHRFARRVTLNAQLNPLAEQILQHQQQQASLQDQQRQLETRRTQAQASLLEAQ 360 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAK---------------------------QSAELQQ 343 Q LQ + ++ H A + Q + Q Sbjct: 361 QNHSSAKPLLQQAFDTQNTLNHLAQELAKVSDLHLQTGQLCTEGQASLHILLDQQQLVSQ 420 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR-------QWQQQLTHAEQKL 396 + + + L+ + WR + T L+ QQ+ + A+Q+L Sbjct: 421 RLERIAGQLEHSSELAPLAQAWSAWRDRLKSLTLIANRLKHGQSELPALQQRASTADQQL 480 Query: 397 NALAAITLTLTADE-------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 L + + + L + +Q+ + L L ++LA Sbjct: 481 TEQRNALELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEDLARLWTSQQDVDRQLA 540 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQE--ARIKTLEAQRAQLQ 501 L Q+ Q++ Q N+ +R Q L + + E++ AR ++E R QLQ Sbjct: 541 DLAQQQQSAQQQREQLNSEGIRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ 600 Query: 502 AGQPCPLCGSTSHP--AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 QPCP+CGS HP EA + + + + V +L E+ LR Q+ + + Sbjct: 601 DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDQLTEQRNQLREQVGGVIAR 660 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 + + + L QAL ++ + + WL + ++++ Sbjct: 661 QKELLRQHEQLTLRHQALAPDLESHPLAAQLLDHDPGKRDSWLS--QQLNNLSEVITRDE 718 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATR--------- 670 + Q + ++ + Q+Q++ + T + A L Q D + L Sbjct: 719 QRQEALLTLHKDAARLQKQLQAATEASQTAASHVAEQLKQLDVDRQRLDEELSAFTPLVS 778 Query: 671 -----------QQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 +Q+ + + + Q E E+ L Sbjct: 779 PHVLEGLRSDASATVMQLEQQVTQRLDQLEQQHEEQQEQSERQQKIEKQQIEQQTRLHRQ 838 Query: 720 RQVHEQCLALHSQQQTLQQ-------QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 ++ ++ L QQQ QQ + A Q + + A Q + Sbjct: 839 TELAQEVARLGEQQQASQQALTGLLGEHATAEHWQQALENAIEQARQTESSAAEALQQIQ 898 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL----TVTVEQI 828 Q +L+ +Q ++ +++ L Q +E QH + L VEQ+ Sbjct: 899 SQLIQLAAELKSAQQQQQSLQQELAELDVQISEWRGQHPELDDTALDTLLTYDDAHVEQL 958 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQ--------------------------------- 855 + +L T + L + E Q+L+Q Sbjct: 959 RLQLNATDKALEQAKVLLQERDQRLQQHQAQHSDLSDSTQLAAALQQAHEQSALGEQQCA 1018 Query: 856 --------DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 D R L +I + W L SLIGS EGDKFRK AQ LD L Sbjct: 1019 DLRAELSEDQRRRNANSELQARINDANDEYLRWARLASLIGSAEGDKFRKIAQAYNLDLL 1078 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 VH AN QL +L RY L+R S L + V+DT D +R +LSGGE+FLVSLALAL L Sbjct: 1079 VHHANAQLRQLVRRYRLKRGGSM-LGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGL 1137 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 + + S RI+SLF+DEGFG+LD E+L A+DALD L A G+ +GVISHV+ M ERIPVQ Sbjct: 1138 ASMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQ 1197 Query: 1028 IKVKKINGLGYSKLES 1043 IKV++ G G S +E Sbjct: 1198 IKVRR-QGNGLSTIEV 1212 >UniRef50_Q1VUD1 ATPase involved in DNA repair n=2 Tax=Flavobacteriaceae RepID=Q1VUD1_9FLAO Length = 1217 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 271/1222 (22%), Positives = 487/1222 (39%), Gaps = 187/1222 (15%) Query: 1 MKILSLRLKNLNSLKG--EWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET 58 MKIL + L+NLNSLK IDF E F GL+AITG TGAGKTT+LDAI +ALYH Sbjct: 1 MKILKIELQNLNSLKSDSPIVIDFENELFKDVGLYAITGSTGAGKTTILDAITIALYHNV 60 Query: 59 PRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-VELA 117 PR +N + D+++ + + V FE + Y A+W A + V L Sbjct: 61 PRFNNSKGTLLDVVSHGATDAFSRVTFENENTIYEAYWGMRLASKSGKLLVNPQEEVSLK 120 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 IL+ + + E +T LDY +F RS++L+QG+FA+FL AK E+ LLE++T Sbjct: 121 NLTSNTILSSQKRAVSEDVIRVTQLDYDQFLRSVMLAQGEFASFLTAKGPEKGRLLEQIT 180 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 G EIY +I + ++ L +++++ + +L+ E+ LT + L + Sbjct: 181 GEEIYKKIGQAILDRKAKEENTLREIKSRINADDVLSEEEKIQLTTKNKELVVHILEAEK 240 Query: 238 AQQQEQQSLNWLTRQDELQQEASR----------------RQQALQQALAEEEKAQPQLA 281 Q +NW + EL E+ + + L + E + + Sbjct: 241 EMNSIQTIVNWYLKSKELTHESEKLELDSRVVIIEFENHKAEFELLDLNEKAEPFKELIQ 300 Query: 282 ALSLAQPA---------------RNLRPHWERIAEHSAA--------------------- 305 + + A R L+P E++ + Sbjct: 301 NFNRNEKASLEKTNQLKLLEEQLRQLKPEIEQLTGLTKKQIEELDLEDKNYEAWQPKFDL 360 Query: 306 ----------LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 A +Q+ +++ +Q + L + + +K S E + ++ ++ Sbjct: 361 VTKLDGQLKNEADNQQKSKKLLDEVQRELKLLSDEKSECSKLSKEAENNINIDEDFVTQN 420 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ------------------KLN 397 N E + W A + ++E L + + ++ K+ Sbjct: 421 KFLTAVNQEMSSWTAALATLNGNKEALNENISTIEQKKKGVETTKSELSSNKELLDSKIA 480 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG----------QIVPQQKRLAQLQV 447 + I +T + A ++ + L + Q + + K L + Q Sbjct: 481 EIKKIDREITIIKEQLAKDNLSDLLNEEKRLAEIISKWKQLKTFSVQYLKETKELERAQT 540 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 ++ + L + + + + I E E I E R L AGQPC Sbjct: 541 QKGKLSADIDTLKKELETKSKEILTHEKLVEKAQKIYELEKSISKYEDDRHNLFAGQPCG 600 Query: 508 LCGSTSHPAVEAYQA-------LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 LCGS HP E ++ E L L+N L ++ + +++Q+ Sbjct: 601 LCGSKEHPFTEHLESVGVSKSLHELNEFTKELEVLKNNKSDLEKKEIKFTTSSEYLSQQI 660 Query: 561 QRDENEAQSLRQDEQALT--------------------------------QQWQAVTASL 588 +E + ++ + + L QQ Q L Sbjct: 661 LAFNDELKEIKFNAKQLELDTELTNSTKIEIEINQSTPKLLAMTGQINSAQQLQKQKDKL 720 Query: 589 NITLQPLDDIQPWLDAQDEH--ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + + L +D E+ L ++ + I ++ + + +++++ Sbjct: 721 SEDFKVQNQSIEALKTKDVSLGEKIKNLTAEIDSKKKSIDELSKTCARLENELKEKLARF 780 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 L T E+ + ++ + +++L +NR+ + ET ++ + Sbjct: 781 NYQLPSIEDTTSFIQGIEAKITQLNSTQKNLDELKSDLRVFKNRLIDIDKRTETSVKAYD 840 Query: 707 LPHCEETVVLENWRQVHEQCLA-------------------------LHSQQQTLQQQDV 741 T + Q+++ +A L ++ LQ+Q Sbjct: 841 EHKKSITESDKKSVQLNKDRIAILPLDITVERKRNSLLLIRKKLTDKLELSKKELQKQLD 900 Query: 742 LAAQS-----------------LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQ 784 L + ++ D + S F+ ++A AL+ + + Q Sbjct: 901 LQREKKAIKLENKKEQVVLKTVYDSLKSTLDAQISESDFESKEAIEKALLSREQKLKHTQ 960 Query: 785 LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTT 844 K+ ++ ++ + +TL + +++ + + + + K + Sbjct: 961 NKERIKEKQLRLKTLKETNLKAISKQNKTKTFETTEEES-----KALSEDLKIKRDGFSA 1015 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 +GE+++ ++D + + + Q + +QI W L +IG+ + D F + Q LTL Sbjct: 1016 EKGEVKEAFRKDQEIKDRNQEVYKQIEAQDAICNVWRELFKIIGNSK-DAFNVYVQRLTL 1074 Query: 905 DNLVHLANQQLTRLHGRYLLQ----RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 +L+ LAN L +L+ RY L+ K E L ++D +Q D R T SGGE F++S Sbjct: 1075 KHLLDLANVHLYKLNKRYSLKMEEVYKPKEELNFNLIDHYQTDQARLVDTSSGGEKFIIS 1134 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALAL LSDL S +IDSLF+DEGFGTLD +TL+T + L+ L + GK IG+ISHVE + Sbjct: 1135 LALALGLSDLASKNVKIDSLFIDEGFGTLDKDTLETVISTLETLQSDGKMIGIISHVENL 1194 Query: 1021 KERIPVQIKVKKINGLGYSKLE 1042 KERIP QI + K + G S +E Sbjct: 1195 KERIPTQIMINKKS-NGVSMVE 1215 >UniRef50_Q73RB9 Nuclease SbcCD, C subunit, putative n=1 Tax=Treponema denticola RepID=Q73RB9_TREDE Length = 1030 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 201/1065 (18%), Positives = 417/1065 (39%), Gaps = 57/1065 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L N+ +G IDF+ + +F + G TGAGKTT+ DAI A Y + Sbjct: 1 MKPEILKLTNIGPFRGTHTIDFS----LMDSIFLVCGKTGAGKTTIFDAISYAFYSKPLG 56 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + +++S + E+ F + YR F R P + P Sbjct: 57 SRSQITRSLRSQFAPEEETAEVELVFTMGPAKYRIFRRLPFLR--PGKKNETPEESALAQ 114 Query: 120 ADGKILAD----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 DGK D +D + + L+ F R +LL QG+FAAFL ++ E LEE Sbjct: 115 WDGKTWKDLSSTNKRDTDKKILNIINLNEKEFARIVLLPQGEFAAFLRENSSQKKETLEE 174 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L Y +I + E+ K+ +++ Q + S + + E + + Sbjct: 175 LFPISRYTKIMENLKEREKAESYKIKNTQDALEALG--KEFDADSYPSKKEGFEKEIELI 232 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + + + + E + +++ L E + L + A Sbjct: 233 KKNYNKISKKIEEKISEKEQAKVLKEKKEELVTIKTRLENLNAHKEEIGLMEEAVEKARR 292 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA---KQSAELQQQQQSLNTWL 352 +A + +++ ++ I E T ++ + ++ Q E++ ++++ Sbjct: 293 AASLAALADSVSKLKNNIAEYKTDIEKKIKDLNAVTQVLDSLKAQEKEIEAEKENNTALK 352 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 Q DR ++ + ++ ++ ++L E+ + L E+ Sbjct: 353 QSLDRLKRAAEVYKEIEERSYEKKGLSLQKKENTEKLAQTEKNIQELKDKVSEYL--EII 410 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 + L E ++ ++ + + + L + + + Sbjct: 411 SELDNRKEMAETSTQKLSYLKRLFDIAVKKEKASKLYTTHKAAAEKNYNDLQLILKDIEI 470 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 + + +K + A L+ G+PCP+CGS HP+ ++ Sbjct: 471 EKELFEKLKKEKKDLEINAEASALAVHLKDGEPCPVCGSIHHPSPAVENTESIFSLDEKI 530 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 E ++K + +L L A K + + L + L ++++ + Sbjct: 531 QKCERSIEKFNLDKDSLSNSLTARNKDADWHKEQLAELDRSFFNLNEEFKNTSFIFEEMP 590 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 + E L + E + Q + +EQ+ + T Sbjct: 591 S-----------EKTIEDLLPQAGKEAEKDSLLFKEAQTANTAKINLEQKLSSIQTQKEA 639 Query: 653 YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN--RIQQLTPILETLPQSDELPHC 710 L +ES L T E + +Q + ++ + + + + +E + Sbjct: 640 LTDALTNIKIKESELNTILHEKK--KQYDDAFKSIPSDIQKENIDDTIEGCNEMIFASDR 697 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFL 770 + + E ++ +++ ++ + Q+Q +SL + + + + F + L Sbjct: 698 KISGYEEKLKENNDRHTSIKAGLIQRQEQLAKWEKSLLEEEENLKDSFERKGFSSLKELL 757 Query: 771 AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ 830 +++ E+ ++ E+ + ++ + + + +P E+I+ Sbjct: 758 DSILPEEKISDFEETITKFKEEKITLEHSAAGLKKDIEGKTFIQP----------EKIED 807 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN-SLIGS 889 E+ + L E EI+ L + D +++Q+L++++ Q ++ + L+ SL GS Sbjct: 808 EIIILQKNLDEEQDRLAEIKSSLDKLKDLFERRQSLLKELKQRAEEAQLITELSLSLNGS 867 Query: 890 KEGD-KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS------EALEVEVVDTWQ 941 + KF + L ++ AN +L R+ GRY+L+ L++E+ D + Sbjct: 868 NKYKLKFNIWMLSAFLREIIVYANTRLERMSGGRYVLKLSKELSGNNLSGLDMEIYDAYT 927 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 +R T +LSGGE+F+VS++LAL L+D + S R+DS+F+DEGFG+LD +L+ A+ Sbjct: 928 GG-IRPTASLSGGETFMVSISLALGLADSIQTRSGGIRLDSMFIDEGFGSLDEASLENAI 986 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD + + +G+ISHV +K RIP +I+++K + K+ Sbjct: 987 SILDEVR-GNRMVGIISHVSELKTRIPQKIEIEKNSNGSTIKIRG 1030 >UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B7F Length = 997 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 277/1055 (26%), Positives = 425/1055 (40%), Gaps = 81/1055 (7%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 KIL +R NL SL G++ +DF P A GLFAI GPTGAGK+TLLDA+ LALY +TPRL Sbjct: 2 KILQIRGSNLASLAGDFNLDFESGPLAEVGLFAIAGPTGAGKSTLLDALSLALYDKTPRL 61 Query: 62 SNVSQSQ--------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQPD 106 + S Q +L+ R LAEV F G YRA WS RARN+ Sbjct: 62 ESNSGYQIPDGPDESLGVNDPRNLLRRGEVNGLAEVRFIGTDGRRYRAHWSVRRARNKVG 121 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ+ ++L G+ LA + L T GL + +F RS+LL+QG FAAFL AK Sbjct: 122 GKLQLSDIQLFDDESGQSLARTKTEVLAATERAVGLTFDQFRRSVLLAQGDFAAFLKAKS 181 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ER+ELLE +TGTE+Y IS + + K L + + +L E +L AS+ Sbjct: 182 DERSELLERMTGTELYSAISKRAYAKVKEIEESLRLREEATKALPILDTEARAALVASID 241 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + + W + +L + ++ L A + A P+ AL+ Sbjct: 242 ELGKTVASTASHLGVLRAQKAWWIQAADLGHKLTQASARLAAATKQWTDAAPRREALADI 301 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + + LR + + L ++Q++ + L A+ S Q + Sbjct: 302 ERVQPLRAIDKEATRTADELDAAQKQLKAAESTLAQARGDDERAASVLAQASKNQTQHRA 361 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 + D+ R + L Q L Sbjct: 362 EAEVTKPQIDKARSLDQAIDERAKALGVTEKKLAEANNDLVVLVKKGQALGEQRTTVAAT 421 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 A A + + Q+ +K + + + Q N A+ Sbjct: 422 LEKLARWVEANGALVALAKGWSEGVAPQLQAFEKTHVTWKAQLAALPSLQLVHNKAVAAQ 481 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 Q ++ A K E+ + EA Sbjct: 482 VQAQQDLFSIEAAAKAAQERVRTAEAAEAAHPA--------------------------- 514 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 S L + L A L+ Q + K + + + + +A Sbjct: 515 ---SNLAGRRTALDALRARLAKLQQQRELALKANKECLENLTHAFGEVEGWQGEIEADPK 571 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + + I+ HE + L+ I + + + Q++ L Sbjct: 572 TFGA--KWIARIEKARQNTQGHESGSKQLAD-------IDTQQEIQVNGLKHSTQQRDAL 622 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 Q E ++ LA RQ+ Q Q E L + + Sbjct: 623 DAERKQ------QAAERDALLAQRQEVLQGRPAAQVEAA---------------LQAALK 661 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 E ++ E + + +AQ+ + A AL + D Sbjct: 662 ASEQAHAAAAEQAKRTREDATKKGEAHKIAEHAVAKSAQAKELAAKALTEALLTAGLDAA 721 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 DE + + +++ V + L+ HQ A T+ + Sbjct: 722 TLRTRLAHDEPWIRRERAALNEVDHLHSSETKAVEERQRDLSAHQAQ-----PAPTLPLV 776 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 I+ LA + E + G +Q+L QD NR + +++ Q ++ W L++L Sbjct: 777 GIEATLATLEPQHGEQSQQLGAAKQRLDQDNQNRATGEAKARELEQARKEATVWQQLDTL 836 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 IGS +G KFRKFAQ +T++ L+ AN +L L RY LQR ++ LE++VVD D +R Sbjct: 837 IGSADGKKFRKFAQSMTMELLLAHANAELASLAPRYALQRVKAQDLELQVVDRDMGDEIR 896 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 T +LSGGE+FLVSLALAL LS L S K RI+SLF+DEGFG+LD +TL+TAL LD+L + Sbjct: 897 STSSLSGGETFLVSLALALGLSSLASEKVRIESLFIDEGFGSLDPKTLETALATLDSLQS 956 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 G+ +G+ISHV + ERI VQ+ V++ G G S + Sbjct: 957 VGRKVGLISHVPGLAERIGVQVLVER-QGQGASTV 990 >UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A34 Length = 1019 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 208/1068 (19%), Positives = 378/1068 (35%), Gaps = 81/1068 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + + + +IDF + +F I+GPTGAGKT + DAI ALY E Sbjct: 1 MRPIKLVMSAFGPFREQVEIDFNG--LKNKNIFMISGPTGAGKTVIFDAISFALYGEGSG 58 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + + T + EFE+ Y+ + + L + Sbjct: 59 NNRKNEELLISDYTTNGILTFVNFEFEINKTNYKLIRYPEQKNTEKKCVLYI-------- 110 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + + + E + GL +F + ++L QG+F FL KE+ E+ ++ GT Sbjct: 111 -ENEQPITDILTVTEKIEEILGLSKDQFKQIVMLPQGEFNKFLTTNTKEKIEIFRKIFGT 169 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLL---------TPEQVQSLTASLQVLTD 230 +++ I + E + L + + + T ++ LQ + + Sbjct: 170 QLHHAIQEDFKNRASQLEQEYKFLNTRITELITTLAFPDYITDTAIAIEYAHEYLQTIAN 229 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 E Q ++Q + L L + L Q ++ L Q E K Q + + + Sbjct: 230 ETIQRQACKEQAEDQLQTLYAEQSLIQNNNQLLLKLSQVNQELIKLQNKKVEMEQLELKI 289 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 N + + + + + L ++ + Q Sbjct: 290 NALDTIKEFSNDYIYIQKSTDEYNRMLYDLSE----YEQLKLELTIELKNTQILFDDYEL 345 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD- 409 + +HD + E + + + +E L + + EQ+ + Sbjct: 346 KVSKHDELKIKRRELEKLIPKITHSENLKEKLNKLTTLINEKEQQKTTITTKFEENKNQI 405 Query: 410 -EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 ++ L + + AL Q + + L L ++ + M Sbjct: 406 TQINETLKSFSYIELDKVKAEALKIQTLSKYNSLKTLYTDCKSYEAAIVEH----KNMTT 461 Query: 469 RYKEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 Y K + +KT E +I + LQ G CP+CGST+HP+ + Sbjct: 462 XYISKNKNFEKLKTDYEISEKIYYNEQAGILAMSLQNGISCPVCGSTAHPSPATVKTAIT 521 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + ++ A++ ++ E LR QL + LQ + + Q + + Sbjct: 522 IPTKIQIDAMKKTLETARIENNELRDQLIELNTNLQVMLSNI-----ELQLFLLKEPKYS 576 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 T+ L H L + L Q+ + +Q Q + Sbjct: 577 NQTLNTIYDL--------VHSTHNECLEIDKTLDLLNTQMIEVKNKTLQL-QTLTTHFTQ 627 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L TL Q +++ + T + L LQ ++ + +L T Q Sbjct: 628 YDKELITINQTLQQMAIKKTKIQTELNLLLN-SDVPIFLEELQTKLDSINILLTTEQQLY 686 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E EN+ + +Q L L +Q Q+ + L Sbjct: 687 E-------EYKENFTNITKQILTLDTQIQSQNDYLTTLKSKIDSQHEHLSKNLAEHHIS- 738 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + L+ E + + L Q L E Q + D L + Sbjct: 739 -EDIFETLLPELSFKDM--WVTRLNQYTSQYTELSATAQELTKQLENITYMDLKVLVKKI 795 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + + Q++ + + + L + + + Q+ ++ + + Sbjct: 796 HKGEYLKKYLDQQITDLIKDETSKKLLLSELESLHDKFK-------QLEKKYKLISEIGD 848 Query: 886 LIGSKEG--DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVE 935 + K + F G + ++ AN +L +L R+ L R + ++ LE+ Sbjct: 849 IANGKNSFYISYETFVIGTYFEEIIDAANIRLKQLTANRFTLNRQKEIVKGRNNQGLELT 908 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + + RD TLSGGESF SL+LAL LSD++ S ++D +F+DEGFGTLDSE Sbjct: 909 VFDKYT-HSTRDATTLSGGESFQASLSLALGLSDVIQTKSKGIKLDMMFIDEGFGTLDSE 967 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 TL A+D L L + IG+ISHVE +K +I Q++V N K Sbjct: 968 TLGVAVDTLMELKQDERLIGIISHVEELKNKISTQLEVIPTNNGSSVK 1015 >UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP3_9FIRM Length = 1020 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 195/1093 (17%), Positives = 439/1093 (40%), Gaps = 132/1093 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + + K + IDFT+ + +F I+G TG+GKTT+ DAI AL+ E R Sbjct: 1 MKPVKLEMYGFMTYKNKTFIDFTK--IYDSKIFIISGDTGSGKTTIFDAISFALFGEIQR 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-VELAR 118 N ++D + D + FE+ G+ YR N+ + N+ V VE + Sbjct: 59 EGFNSKDIRSDFLGSDDPITYVDFYFEIDGKNYRIKRIPNQKAKKTRVNVNVSHSVEFYK 118 Query: 119 CADGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + +++D + + + GLDY + R M+L+QG+F+ FL + E+AELL ++ Sbjct: 119 IENKNEILISDGPQKTDKKIIEVIGLDYNQLNRVMILAQGEFSKFLKSNSDEKAELLSKI 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELE----KLQAQASGVTLLTPEQVQSL----------- 221 + +Y +I + E K+++ L+ L+ + LL + L Sbjct: 179 FSSYLYKEIEEKLKEASKNSKRNLDMISNSLENEIVKNELLGDKVDDELIKLKDFQKIID 238 Query: 222 ---------TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAE 272 ++Q+ DE+ L + E LN+ +++E + + ++ L + Sbjct: 239 IIEDLLLESEKNIQIKNDEKLSLNKNLENENSKLNFYEKENEQIENYKNLFKEKEKLLED 298 Query: 273 EEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR---LQSTMALRAS 329 E + L A+ + ++P++E + + + ++ +++ N ++ + + Sbjct: 299 ESFYKNLKKDLVYAEKSIAIKPYYESFLDLNKSQKDLKTKLDFENENSNFIEKELEENKT 358 Query: 330 IRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN---NEPAGWRAQFSQQTSDREHLRQWQ 386 + + + ++++++ L+ ++F +E + F + ++ + Sbjct: 359 YLGNKDELLKIIDKKKENIVKNLEILNKFENLQKIKDELDKNKKAFEDGKNYKKSIENNL 418 Query: 387 QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQ 446 ++ +K+ + L + + H + + + I+ +K Sbjct: 419 KEKEKINEKIRKKSDELLDFSRNLEKITKKSHNAYQKVFEIQNFYEKAIINDEK------ 472 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 I+N+ E+ Q + A + EK + L D ++ +I R L+ C Sbjct: 473 --IKNLNDEKIQFDKA-----NKAYEKAKILLDRAKENKKSIQINEF---RKDLKEKGIC 522 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRL--LALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 P+CG +E ++ + + + + LE ++ ++ + L +D ++ + E Sbjct: 523 PICGRIYKGEIEFLESFDLDIEKIKKDYFDLELKINLSKDKISDLEKSIDFNMEKAEDVE 582 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 Q+ + + + L + ++ V ++ + L+ + Sbjct: 583 KNLQNYKNEHENLKKSYEKVREEYEEEIKN-----------------------KKALENE 619 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 + I + ++E L +E E+ +++E + +++ Sbjct: 620 AFELEKIIGDLENKLENLGN------------LNNIEELENKFKIKKEELDDFDEKK--- 664 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + + + E + E +++ ++ + +S+ ++L + Sbjct: 665 ---------VIENVNFDKKFVENEEGRIKKIDEKIKKLEKEKSSSNSKVESLSSYIKINQ 715 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + + KA+ F+ ++ + F FL L + L ++ Q ++ Sbjct: 716 EKILKAENIFENKIREN-FKCIDEFLKYLEKSKDLIDRKEEIQKYFENLNNISIRLSSLK 774 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 + + ++I++++ L E + ++ + D+ + Sbjct: 775 DYANKE-----------KFETDKIKEKIENLKNILEETNDAVFSLKLNETRLKDSENEIY 823 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSK-------EGDKFRKFAQGLTLDNLVHLANQQLTR 917 ++ + ++ + L+ + E F F ++ LAN +L Sbjct: 824 SIEKNFNKLKNEDGILYKLSKIADGSLSNVSGREKLNFETFVLSHYFRKILSLANIRLKE 883 Query: 918 LH-GRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 + G++ + R + + L++E++D +R +LSGGESF+ SLALAL LSD Sbjct: 884 MTDGQFTMIRKKQTNDKRKNYGLDIEILDA-NTGKIRSEASLSGGESFIASLALALGLSD 942 Query: 970 LVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 +S +ID+LF+DEGFGTL + L+ A+ ++ L+ K IG+ISHV+ +K+ I Sbjct: 943 EISMENGGIKIDTLFIDEGFGTLSDDYLEKAIRTIEKLSYDNKFIGLISHVKELKDAIDA 1002 Query: 1027 QIKVKKINGLGYS 1039 +I+V G S Sbjct: 1003 KIEVSYSKTEGSS 1015 >UniRef50_UPI0001AF53DF exonuclease SbcC n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF53DF Length = 1215 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 340/1219 (27%), Positives = 513/1219 (42%), Gaps = 183/1219 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL G +++DFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQPD 106 LSN+ QS+ L+ R T AEV+F + YRA W NRAR+ Sbjct: 61 LSNIGQSKVPDVDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT 120 Query: 107 GNLQVPRVELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 LQ R L ++L+++ ++ +L GL++ +FTR+++L+Q +F+AFL A Sbjct: 121 KKLQASRQILTDLDSEQVLSNQSKREFEQLIENRLGLNFEQFTRAVMLAQSEFSAFLKAD 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 KER+ELLE+LT T IY Q+ + + K A L+ L AQAS + L PEQ+ L L Sbjct: 181 DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIIPLAPEQLVELEQRL 240 Query: 226 QVLTDEEKQLITAQQQEQQSLNWL-------TRQDELQQEASRRQQALQ------QALAE 272 + K Q+Q + WL Q Q+ +R QQ+ Q L++ Sbjct: 241 ANAQQQLKAHQAQQRQLELKQQWLIELHRLRDEQLAAQESLTRAQQSWDERSAERQTLSQ 300 Query: 273 EEKAQPQLAALSLAQPARNL----------------------RPHWERIAEHSAALAHIR 310 E+ PQ + L + R E A+L + Sbjct: 301 LERLGPQRHRFARRLTLNALLTPLAEQIRQFQAQQTSLQSQQQQLETRRTEAQASLLAAQ 360 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ------------------------ 346 Q LQ + ++ H A + + QQ Sbjct: 361 QAHGLAKPLLQQAFDAQNTLNHLAQELAKAADLHQQTGQLCAEGQASLQTLLDQQQQVAQ 420 Query: 347 ---SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR-------QWQQQLTHAEQKL 396 + T L++ + + WR + T LR QQ+ + A+Q+L Sbjct: 421 RLERIATQLEQSSQLAPLAQAWSAWRDRLKSLTLIANRLRHGQSELPALQQRASDADQQL 480 Query: 397 NALAAITLTLTADE-------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 L + + + L + +Q+ + L L + A Sbjct: 481 TEQRQTLELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEVLARLWASQQEVDHQFA 540 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQE--ARIKTLEAQRAQLQ 501 +L Q++ Q N +R Q L+ + + E++ AR ++E R QLQ Sbjct: 541 ELAQQQLGAQQQREQLNTEGIRVRDELTVAEQTLSVTRQLLERQRLARSASVEELRVQLQ 600 Query: 502 AGQPCPLCGSTSHP--AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 QPCP+CGS HP EA + + + + V L E+ LR Q+ + + Sbjct: 601 DDQPCPVCGSVEHPWHQPEALLQSLTHHDDNEQASAQKAVDLLTEQRNHLREQVGGVIAR 660 Query: 560 LQRDENEAQSLRQDEQAL-------------------------TQQWQAVTASLNITLQP 594 + + + L QAL +QQ + + + Q Sbjct: 661 QKELLRQHEQLTLRHQALMPDLEAHPLAAQLLDRDPDKRDDWLSQQLRQLNDVIARDEQR 720 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHE---------------------------------- 620 + + ++QL+ ++ + Sbjct: 721 QEALLTLQKDAARLQQQLQTAAEASQTAAHHVAEQLKQLDVDQQRLEEELTAFTPLVSPQ 780 Query: 621 -LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW-- 677 L+G + ++Q +QQ+ QR L ++ + E +Q Q Sbjct: 781 VLEGLRNDASATVMQLEQQVTQRLDQLEQQNEEQQEQRERQQKIEKEQIEQQARLQRQTE 840 Query: 678 ------------QQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQ 725 Q RQ L L +TL S E E + + +H + Sbjct: 841 LALDVIRLGEQRQARQQTLADLLGDHATAEQWQQTLENSIEQARQAEASAAQTLQDLHGK 900 Query: 726 CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM-DEQTLTQLEQ 784 + L ++ ++ Q L + Q D A L D+ + QL Q Sbjct: 901 LIQLAAELKSGMHQQQTLQDELAQLDVQIGEWRAQHPQLDDAALDTLLTYDDAHVEQLRQ 960 Query: 785 LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTT 844 Q++E Q + L+ + + L QHQ D A Q+ EL ++L ++ Sbjct: 961 QLQSIEKNLEQDKVLLQERDQRLQQHQAQHSDLSDAG-----QLTAELQGAQEQLAQSEQ 1015 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 ++R +L +D R L +I + + W L +LIGS EGD+FRK AQ L Sbjct: 1016 HCADLRAELSEDQRRRNANSELQARITEANDEYLRWARLAALIGSAEGDRFRKIAQAYNL 1075 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 D LVH AN QL +L RY L+R S L + V+DT D +R +LSGGE+FLVSLALA Sbjct: 1076 DLLVHHANAQLKQLVRRYRLKRGGSM-LGLLVMDTEMGDELRSVHSLSGGETFLVSLALA 1134 Query: 965 LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L L+ + S RI+SLF+DEGFG+LD E+L A+DALD L A G+ +GVISHV+ M ERI Sbjct: 1135 LGLAWMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERI 1194 Query: 1025 PVQIKVKKINGLGYSKLES 1043 PVQIKV++ G G S +E Sbjct: 1195 PVQIKVRR-QGNGLSTIEV 1212 >UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I3W3_CLOCE Length = 1049 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 211/1076 (19%), Positives = 407/1076 (37%), Gaps = 66/1076 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + G+ IDFT + +F I+GPTGAGKTT+ DAI AL+ E Sbjct: 1 MKPLKLTISAFGPYAGKQFIDFTT---LTEQIFVISGPTGAGKTTIFDAISFALFGEASG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S S E E+EFE+KG+ Y+ + + + G R A Sbjct: 58 SSRDRDSLRSDFAEPDTETFVELEFELKGKIYKIRRMPQQQQRKLRGEGYTLRNADAELL 117 Query: 121 -DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 L K+ + E L G+D +F + ++L QG+F L + +R + ++ GT Sbjct: 118 MPNGTLITKIVNVDERINQLLGIDKSQFKQIVMLPQGEFRKLLESDSSDREVIFRKIFGT 177 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQA------------SGVTLLTPEQVQSLTASLQV 227 E + +I + + S + L+ Q + + + +L + Sbjct: 178 EDFAEIQKRIDDDRASLEKSVHDLKTQINTHISHFDVGEDQTLVDMRNSKNINLEQFIYS 237 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ 287 + ++ + + + L + + +E + + + L++ E+ + Q AL Sbjct: 238 VERLLQKDKSIIDEIKAELTETIKAQGMLKEEITKCTEVNRKLSDREQTKQQYEALLSKG 297 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 + + A + ++ + +Q +V L+ R K++ E + +S Sbjct: 298 NEYSQKEKNLEYARKALPISEVDEQCRKVKQTLEVKAGELELARQELEKRTCEFKSIAES 357 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT 407 LNT+ ++ E A + + L+ Q I L Sbjct: 358 LNTYKDLEPENKKNETELALLEKMLPKVIEYEKGLKHLNAARAEYTQLTGEFERIQRELE 417 Query: 408 ADEVATALAQHAEQR--PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 +++ + + ++L QI +K L +L I+ + + +L Sbjct: 418 TNKIKESQQAETLKLIYTTEAECISLEKQISENRKLLIELDG-IRKLMGICQEEQNSLEN 476 Query: 466 MRQRYKEKTQQLADVK---TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 R + + D + + E L+ PCP+CG+ HP + Sbjct: 477 KRAEFASFEKNFCDFRSRLEVMEDNYIRGQAGILAGTLKENTPCPVCGAYDHPKPAEMPS 536 Query: 523 LEPGVNQSRLLALE-NEVKKLGEEGATLRGQLD-AITKQLQRDENEAQSLRQDEQALTQQ 580 P Q R E +++ +L E + +L+ ++ + + ++L + Sbjct: 537 SIPSQEQIRDSKAEFSKLTELRTEKSKAISELNGSVESKYKEIIIRLKALDDIIKIDNYA 596 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 + L ++ L ++ + + E G+ A+ ++ Q + +++ Sbjct: 597 ELVGSGRFETVLGQINATGTGLK--EKTVELKAQYNSKKEFTGKKDAYEKEQTQIRDKVK 654 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 +++ + + L + + Q + E++ +L +E Sbjct: 655 IQEESVQKMTAQ----------KTGILESITKFQTEAQVIEKEISEDIRSASKLKARIEE 704 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 E + + E + + + + + + L + Sbjct: 705 QKTKIADFQKEYNQLKKLHESSREAVSNAEKEVAVRVSSVDESREEITRQERLLKEKLAS 764 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 S F D + FL + + +Q L+ + + + ++ Sbjct: 765 SKFGDYEQFL-------RMKKTQQEIDILQQEITMYYRSLNSLKDLYRHLEEETKGLEKQ 817 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 + + EL Q Q L+E + +N + + L + ++ Q + Sbjct: 818 DILLLNTRYAELEQRQQVLQEQHNLVFS------RYNNNSRTIKQLTGTMEKLKQLECKY 871 Query: 881 GYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR-------K 927 G + L +GD F ++ D ++ AN +LTR+ G RYLL+R + Sbjct: 872 GIIAKLAKVAKGDNPQRITFERYVLAAYFDEIIIAANYRLTRMTGSRYLLKRKEEKGKGR 931 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 A + LE+EV D + A R +TLSGGE F SLALAL L+D+V S +D+LF+DE Sbjct: 932 AQQGLELEVFDNYTGKA-RHVKTLSGGEGFKASLALALGLADVVQSYSGGISLDTLFVDE 990 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 GFG+LD E+LD A++ L + +G+ +GVISHV +KERI ++V + K Sbjct: 991 GFGSLDPESLDGAIECLTEIQKTGRLVGVISHVTEIKERINSVLEVISSKEGSFIK 1046 >UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=C7M6V9_CAPOD Length = 1182 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 300/1180 (25%), Positives = 487/1180 (41%), Gaps = 141/1180 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L N+ S++G + ++ EP S GLFAITG TGAGK+T+LDAICLALY++TPR Sbjct: 1 MKILSVSLHNIASIEGPFTLNLEAEPLKSVGLFAITGATGAGKSTILDAICLALYNDTPR 60 Query: 61 LSNVSQSQ--------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 L+ S +L+ + A+V F+ V G+ Y A W RA N+ Sbjct: 61 LATTKNSVAIADGSAEVQVNNVKNLLRKGAISGYAKVVFQAVDGKTYEAEWQVRRAYNKL 120 Query: 106 DGNLQVPRVELARCADGKILAD-KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G +Q ++L D +++A+ + LE GL + FT+S++L+QG F +FL A Sbjct: 121 SGAIQPETLQLTCLTDNQLIAENRKTLVLEKIKECVGLTFDEFTKSVILAQGDFTSFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R+++LE+LTGTEIY +IS V+E +K + EL+ L+ Q + LT E+ +LT Sbjct: 181 NDDKRSDILEKLTGTEIYTRISKQVYELNKQHKNELQLLEKQLENIVFLTEEERSALTEQ 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 L + K L + ++ W Q Q+ ++A E+ + L+ Sbjct: 241 LTADEERLKTLQASLATLKEQQQWFDNQKLYTQQWQEAIANKEKAEQEKTSQAERFGELA 300 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA---------- 334 + + + ++ LA +Q ++E + A +A + Sbjct: 301 IIEQLQAIKGDILTEQREKELLATAQQHLKEATAEKERLTANKAKVSEQKLLTENDLATA 360 Query: 335 -----------------------------------AKQSAELQQQQQSLNTWLQEHDRFR 359 + LQ +++SL + + Sbjct: 361 KKAYEIAKPFIARAKELDVRLAELTQIFEQKQQQQEAKETALQAKKESLEKVTEHIQKGE 420 Query: 360 QWNNEPAGW-----------------RAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 ++ + W + +Q E L Q Q+LN L A Sbjct: 421 RYIQQEEQWLNTHPDEAQLYRNALWLKQLVEEQQQLNEKLTAHSQAEERLRQQLNELKAQ 480 Query: 403 T-LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + LA+ + + +I K+ +V + + QE + Sbjct: 481 YPIQALPSTDIEMLAKQQKAYLTALQVYQADREIAKHIKQYTDAKVQREALLQEMQNTQS 540 Query: 462 ALNEMRQRYKEK---TQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPLCGSTSHP 515 + E QR K + TQ D Q A+I K + R L G+ CP+CGS HP Sbjct: 541 QILETLQRLKTEKIATQIACDTAERIYQRAQIENTKDVAFLREHLVEGEACPVCGSVHHP 600 Query: 516 A-VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS----- 569 +A Q L + +++ L +E T +L + K+++ E Sbjct: 601 NAHKAVAEHLIDTVQQEFLTAKKQLETLTKEVITKETELKELQKRIESQTAENAERTDLW 660 Query: 570 LRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 ++ E+ + S+ I D I E+ER +L++ L ++ Sbjct: 661 QQESERLSQSVYYTTYPSVKIEEYITDKIAKTEHLLAENERLFEVLNRLKSLTDELNTLA 720 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 + + Y+QQ ++ Q L + A + + + W+ + + Sbjct: 721 KDVENYKQQRQKYSQQLQSLQLSDAWLNLWKTDIVQFQTQITTAKTDWEAHSACIEKYKK 780 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQ-------------QQTL 736 R+ +LT L S ++ E T + + Q L + +++ Sbjct: 781 RLAELTQERTELASSQQVLRQELTELTTTIDKEQAQLQTLKEERAGLLEGKSVQVIEESY 840 Query: 737 QQQDVLAAQSLQKAQAQFDTALQA--------SVFDDQQAFLAALMDEQT---------- 778 QQ L++ Q Q++ L QQ A + E T Sbjct: 841 QQHLEQLTTLLEQTQQQYNAILLEMTANEKTLETLAMQQQQSQAHIAESTHKIEEWLTAY 900 Query: 779 --------LTQLEQLKQNLENQRRQAQTLVTQTAETLA---------QHQQHRPDDGLAL 821 ++++ + + + + +A Q + L Sbjct: 901 KPAQIEHIRRKMQEWANRSHEWLQSERQALQSLNDRIAQYNTIANEKQQALETLKEKRPL 960 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 T E I Q+LA+ + + + +L D R L + + W Sbjct: 961 NFTEEDIVQQLAEQTAEEDTFRDTVVTQKSRLLNDEQQRAIAVELHTAKEEKEKLAHRWS 1020 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 LN LIGS G+ FRK+AQ TLD L+ AN Q+ L+ RY LQR + +L ++V+D Sbjct: 1021 LLNDLIGSSTGNAFRKYAQEYTLDMLLQYANVQMRYLNRRYTLQRIPN-SLSLQVIDNDM 1079 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 VR +LSGGESFLVSLALALALS L S K +++LF+DEGFG+LDSETL ALDAL Sbjct: 1080 GAEVRSVYSLSGGESFLVSLALALALSSLSSTKMNVETLFIDEGFGSLDSETLSVALDAL 1139 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 ++L GK +GVISHV+ M ERI V++ V+K G G SK+ Sbjct: 1140 ESLQNQGKKVGVISHVQEMVERIAVKVVVQK-EGNGKSKI 1178 >UniRef50_A4VHU3 Exonuclease SbcC n=2 Tax=Pseudomonas RepID=A4VHU3_PSEU5 Length = 1217 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 337/1218 (27%), Positives = 501/1218 (41%), Gaps = 183/1218 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++RLKNL SL GE IDFT EP AS GLFAITGPTGAGK+T+LDA+CLAL+ TPR Sbjct: 1 MRILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR 60 Query: 61 LSNVS--------------QSQNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 L +VS + +L+ R AEV+F V G YRA W RAR + Sbjct: 61 LDSVSPLNKVPEVDAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI 120 Query: 106 DGNLQVPRVELARCADGKILAD-KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 DG LQ L G +LA K ++ EL GL +FTR++LL+Q +F+AFL A Sbjct: 121 DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ER LLE+LT T +Y ++ FE K A+ L +L+ QA G+ L PEQ + L Sbjct: 181 DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQREVLENE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 Q DE K L + + WL+ L+ E Q LQ A E E L Sbjct: 241 HQAQLDELKALQQQLKALEAQRQWLSELQRLENEREAACQQLQDAEDERENLAEARRILD 300 Query: 285 LAQPARNLRPHWERIAEH---------------------SAALAHIRQQIEEVNTRLQST 323 L + R + R+ + LA ++ Q + +L+S Sbjct: 301 LFEQLAPQRHRFLRLQDLGPLLEKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSA 360 Query: 324 MALRASIRHHAAKQSAE-------------------------------LQQQQQSLNTWL 352 R + E L+Q +Q Sbjct: 361 EQARQDAEPRLVQARREEERLQHLNADLAAIREESVQADAAASAGEATLKQLEQQQQRTA 420 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE-- 410 ++ Q A + + R L+Q Q +Q + L A+ A E Sbjct: 421 EQLAALAQPLETSAALQPLCAAWDGYRPRLQQAVQLAVRLQQGRSELPALEAQAQAAETQ 480 Query: 411 --------------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 +A LA+ Q + + + L+ + + Sbjct: 481 QNVAREALDNLQRERDSDVGLAEQLARLHRQLDDWRQAERETEALRELWSQQRALEASRR 540 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTIC---------EQEARIKTLEAQRAQLQ 501 + T + A L+ + K+ + ++ AR + +EA RA L Sbjct: 541 ELLDAATDQQAELDSLVPLGKQARIDRDAAEQALTVTLAVLERQRLARSENVEALRAALV 600 Query: 502 AGQPCPLCGSTSHP--AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 G+PCP+CGS HP +A A + S +++ + LR + A++ Q Sbjct: 601 PGEPCPVCGSHEHPWQQTDALVASLARHDDSEAERARQALQQQDQRLQELRDRHIALSTQ 660 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ------------DE 607 L++ + + QAL + A+ A + QP + WL+ Q Sbjct: 661 LRQTQQRQSEVDAQLQALAPRLLALPAHARLLEQPEAERSQWLETQLTTLKGQIASASQL 720 Query: 608 HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ-------LLLTTLTGYALTLPQE 660 ++ L L + LQ + ++ QQ+ +++ L L +A LP E Sbjct: 721 QQQLLALQQRSETLQQAWQTAREACVEATQQLARQRDALARDSLQLDEELAAFAELLPGE 780 Query: 661 DEEE--------------------SWLATRQQEAQSWQQ--RQNELTALQNRIQQLTPI- 697 + L T+ + A+ +Q ++ LQ R +Q Sbjct: 781 QLQRWREDPAQTFMQLDASIATRLQQLQTQAELAEELRQCEQRRSDEQLQQRHRQEKQAG 840 Query: 698 --------------------------------LETLPQSDELPHCEETVVLENWRQVHEQ 725 + L + + + + + + Sbjct: 841 CSVRLAEREKLLLACQQALRTSLGEHGSASAWQQQLDATIQAARQTQAGIDQQLNESKLG 900 Query: 726 CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL-MDEQTLTQLEQ 784 LHS+QQ +Q+ Q A+ A D L MD+ L + Q Sbjct: 901 LTRLHSEQQNCRQRHAELQQERDALNAELGAWRAAHPALDDTILAQLLQMDDALLAEARQ 960 Query: 785 LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTT 844 Q + + + LA HQQ + + A EQ+QQ A+ + + Sbjct: 961 RLQQNAETLTRCRERLDGCLNRLASHQQQQAEVPEA-----EQLQQAHAEQLHRCEQAEQ 1015 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 E R L D R+Q L+ QI + +++ WG + +LIGS +G FRK AQ L Sbjct: 1016 RCAETRAALLDDDKRRRQSHALLAQIDEARAEMQRWGRIAALIGSSDGGAFRKIAQAYNL 1075 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 D LV AN QL +L RY L+R L + V+DT D +R +LSGGE+FLVSLALA Sbjct: 1076 DLLVQHANVQLRQLARRYRLKR-GGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALA 1134 Query: 965 LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L L+ + S K RI+SLF+DEGFG+LD E+L A+DALD+L A G+ + VISHV M ERI Sbjct: 1135 LGLASMASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERI 1194 Query: 1025 PVQIKVKKINGLGYSKLE 1042 PVQI+V++ G G S L+ Sbjct: 1195 PVQIQVQR-QGNGQSGLK 1211 >UniRef50_C8PR35 SMC domain protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PR35_9SPIO Length = 1092 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 225/1097 (20%), Positives = 401/1097 (36%), Gaps = 84/1097 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET-P 59 M+ L L N+ GE ++DF LF I G TGAGKTTL DAI A Y + Sbjct: 20 MRPKELILHNIGPFTGEHRVDFD----TLGSLFLIYGQTGAGKTTLFDAISYAFYGKPLG 75 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 S V ++ D A + F + + YR + + V L Sbjct: 76 GRSGVMRNLRSHFADDYAISDVTLTFFIGAQLYRIKRQLPYTK-EGRKLETPEEVSLEYY 134 Query: 120 ADGKI---LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 +G + ++ +L L F+R +LL QG+FA FL A+ ++ E L L Sbjct: 135 GNGGWENRSSTNKRETDAAIQSLIKLSDKEFSRIVLLPQGEFAQFLRAQSSDKKETLMHL 194 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASLQVLTDE 231 + Y + + + E + ++A + L + + DE Sbjct: 195 FPIKRYSDLMQEAKLRADKLQQEAQTIEANLETLHSRFVYHRYESDRAELLNEIDRIRDE 254 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN 291 ++TA Q + L E ++E R + L+ EE A + AQ A Sbjct: 255 HGGVLTALQTKNTELEQEKILAEKRKELERINEELEACRVREEDILNLKAKIEKAQRATP 314 Query: 292 LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 L H ++ E AA A +QI E R++ A +++ + +A+ +QQ+ SL Sbjct: 315 LAVHVNQLLELEAACAADERQIREKRERMEDLTARMNALQDRQSDIAAK-EQQRDSLYAV 373 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + + E ++ + L++ Q++ A A TA Sbjct: 374 IDSLRKAAVLEQE-------IGTAQAEEDKLKRAAVAAQAQLQRIEAQLAAVTEKTAALT 426 Query: 412 ATALAQHAEQRPLR--QHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 A + R Q + + Q+ + QL + + Q L E+ + Sbjct: 427 PAVDALDEREHTYRGLQSRLDMEKQMHDILCKHEQLNTFLHSYAQAAAHARVQLAEIARD 486 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 Y +T+Q++ ++ + R + A QL+ G PCP+CGS HPA Sbjct: 487 YDIQTEQISRIEEEKKAAERQRAAAALAEQLEEGTPCPVCGSVHHPAPAHASEQSAFSFD 546 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA--- 586 R+ A + KL E + L + + + L +++ +A Sbjct: 547 ERIEAAKRSATKLQHEKEKAQAALAGAEASYTNYQKQIDERAAAAEELRLRYKECSADAF 606 Query: 587 ----------------SLNITLQPLDDIQPWLDAQDEHERQLR-LLSQRHELQGQIAAHN 629 +N LQ + + E + R L +R + + + Sbjct: 607 PDGKDAAESRIKETAQRINEALQAYNASRKAFAEHKTLESESRNLQRERQDYAQRQHSAE 666 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTL-------------PQEDEEESWLATRQQEAQS 676 QQ+ ++++++ + + D + + A +Q Sbjct: 667 QQLSGVSAALQEKRRQFDQAFSQLPEDICTVRLSADTEADTAAPDTKAAGKADKQGTGGR 726 Query: 677 WQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 + E + + I LE + + + + + + T Sbjct: 727 LKILDAEASGAE--IPDAETALEQCEALLQELKLTINAYQTDVSEAAQNLERIRGELSTA 784 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 + AQ + A + A F D + A+ E + Q K ++ Q Sbjct: 785 ETHGRERAQQRSEKAALLEAAYIKEGFADLEDLQQAVCSEPEIA---QWKTEIDTFYEQY 841 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 A P D L VE +++ + +L T + ++ Sbjct: 842 AAYKQAAAGLEKDVSATEPRDLDELEAAVETLRKRYDEIQARLEVLNTEKAKL------- 894 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQ 914 + Q L + +A T + ++W L + K F + L + AN++ Sbjct: 895 EELHAQHTELTKALAVKTAEAQNWVALAKDLCGSNPRKLQFDTWILSAFLHEVTMFANKR 954 Query: 915 LTRLH-GRYLLQRKAS-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L R+ GRY L L++E+ D + R + TLSGGE+F+ S++LAL Sbjct: 955 LERMSEGRYRLAVSEEHGTGNAYRGLDLEIADAYTG-KCRPSATLSGGETFMASISLALG 1013 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 L+D + + RIDS+F+DEGFG+LD + L+ A+ LD + + +G+ISHV ++ R Sbjct: 1014 LADSIQARAGGIRIDSMFIDEGFGSLDEKALENAVGILDEIR-GNRMVGIISHVGELQSR 1072 Query: 1024 IPVQIKVKKINGLGYSK 1040 IP +I+V K + Sbjct: 1073 IPQKIEVIKTGTGSSIR 1089 >UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT4_9CLOT Length = 1004 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 223/1070 (20%), Positives = 423/1070 (39%), Gaps = 94/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+ L L ++ + + +IDF + F GLF I+G TG+GKTT+ D I ALY ET Sbjct: 4 MRPLVLTMEAFGTYIEKTEIDFRK--FGKQGLFLISGDTGSGKTTIFDGIMYALYGETSA 61 Query: 60 -----RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV 114 + E+ FE G Y+ + S R G + + Sbjct: 62 GSGKNNTGRNGEMLRSDFADPKQLTYVELLFESGGHEYKVWRSPAYERP---GYKSMKQA 118 Query: 115 ELARCADGKILADKVKD--------KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 E+ DG+ K D + + GL +F + +++QG F L A Sbjct: 119 EVRWMEDGQETELKAADIDGKRTAGVIGRVREVLGLTADQFRQVAMIAQGDFKKLLVADT 178 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 K R+++ + + T+IY I + + K A +L A+ T+ E Sbjct: 179 KTRSDIFKTIFDTKIYEYIQNRIAQDCKEAEGVYTELVAKVDR-TIEGVELPDETELYKT 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL--S 284 L D + L L L ++++++ + + L + + Q + Sbjct: 238 GLQDLPEHLENRHLAFDDILEELHSLNQIEEKQA---KDLHHQIESYTQTNNQYDNWYTA 294 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + + R + ++ H A ++Q+ + S A L + Sbjct: 295 IEKNKRIIGQTYDGYVAHLDAYRQVKQEFVSAEAQNHSMEAQSTEP----------LMLR 344 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 Q L R + E Q R+ + +++L ++L + Sbjct: 345 QAELQKQADSFVRLNEMEKELLLVEQVCHQAGKKRQDILATKKKLQKQTEELEQIVNPGD 404 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 T + + + QI + +RL +L+ + + ++ + Sbjct: 405 T---------------SQVKLEKVQTEKKQIAERMQRLQELEKECLEIDHLEIKKQQMVV 449 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + R ++++ Q A+ + + + A LQ G PCP+CGS +HP E Sbjct: 450 DNRSAFEKRNQANANYEEAI-RNRNDQICGELAANLQEGTPCPVCGSKTHP--EKAHCDG 506 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 V + + L + +L ++ +L+ N+ + + A T Q Sbjct: 507 AVVTEEMVKKLRAAFDQADASFRRKENELGSLNGRLEEKRNQTTAAVMEMAAFTIPDQTA 566 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 A + I + W +E E +LR L + H H +Q+ + + QI++ ++ Sbjct: 567 QADVLIDEVRKLHVI-WEKRTEETEARLRTLEKEHR---SYQEHKRQLGELRLQIKELEE 622 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + Y ++ + S+ A + AQ Q+ + + + + ++QQ+ + + Sbjct: 623 TEVRVTEEY------QEADRSYTAKQAAAAQMRQEIRGDESDILKQLQQVRNEIAEV--- 673 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + ++T + + ++ ++ AL + + + + + + + +AL+ Sbjct: 674 ----NRKKTEARDTYNKLAKELSALETNLKRDAEDQNMQYRQEWQLEKDVLSALET---- 725 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 D ++ DE + +L Q EN Q L Q + + TV Sbjct: 726 DSGEMNTSVNDESVIQKLPDSNQ--ENDFADEQELEKQA----GGYGECYTHFCTTSTVL 779 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +EQI ++ +T +K I ++L N+ L + + + L Sbjct: 780 LEQISGQIERTIRKKNSVAIRHDAIAERL---VKNKAAYSKLKKDYGAYLNIYKKYSKLQ 836 Query: 885 SLIGSKEGD-KFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK----ASEALEVEVVD 938 L + G+ K + Q + D ++ AN +L ++ ++ L+R + L++ V+D Sbjct: 837 DLSQAALGNYKLETYIQEVYFDRIIDSANHRLRQIVCNQFELKRGQKTAGNRGLDLFVLD 896 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSH---KTRIDSLFLDEGFGTLDSETLD 995 RD +TLSGGE+F+ SL++AL L+D+VS RID+LF+DEGFG+LDS+ L+ Sbjct: 897 HRTGKE-RDVKTLSGGEAFVASLSMALGLADIVSANAAGVRIDTLFIDEGFGSLDSDILE 955 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 AL+ L L+ S +G+ISHVE +K RI QI V K + G S +E Sbjct: 956 QALNVLAELSESDHLVGIISHVEELKHRIDRQILVTK-DHQGGSHVEIQV 1004 >UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22_SHEPW Length = 1022 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 235/1063 (22%), Positives = 435/1063 (40%), Gaps = 84/1063 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + G+ DF E + LF I GPTGAGKTTLLDAIC ALY +T Sbjct: 1 MRPIKLTMSAFGPFGGQQVTDF--EALGVHPLFLINGPTGAGKTTLLDAICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + D F + YR + R + G +Q P +L Sbjct: 59 DEREGSQMRCDIANDDVLTEVTFTFALADNQYRIRRVPEQPRAKKSGDGYTVQKPEAQLY 118 Query: 118 RCADGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + ++ KV + LTGLD +F + M+L QG+F L A K+R ++ Sbjct: 119 KLDADGTEHILVPSKVSEATTEIELLTGLDADQFRQVMVLPQGKFRELLMADSKDREKIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEE 232 +L T+IY +I + + + + + + + G + + E ++L+ L L + Sbjct: 179 SQLFQTQIYRKIEDKLKFKAAAIKGAVRDHRNKRDGMLHNIAVESDEALSNELNNLAPKL 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQ-------QEASRRQQALQQALAEEEKAQPQLAALSL 285 ++ + +L + +Q E+ + + ++ + +E Q ++L Sbjct: 239 AVAAEKKETAKLALIEVNKQFEMAKLLLNDFENLDKLKRTATELATRKETVDLQQSSLDA 298 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 Q A L+P + E S A Q + + ++ + + + Q + L + + Sbjct: 299 GQKALQLKP----VLEMSLARDTEASQAQHMVSQARFAKQQTENALALSLTQYSSLAELE 354 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 L E + Q + G + + Q Q++ A+ L+ L A Sbjct: 355 LKLQQTQSEQQQLVQLVPQLQGLDSAQNALALASSQREQAQEKGVAAKAALDGLLA--ER 412 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 TA++ L A + Q ++ H +++ + + + ++ A + Sbjct: 413 TTAEQQVPQLECAAAELVNAQQALSGHSELIERFTHWQKAKSEVETTETALRAAKAQGQQ 472 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 +RQ + + Q +K + QL GQPCP+CGS HP + + P Sbjct: 473 LRQVFTQAQAQHQTLKLVW----HRGQAAMLAQQLTVGQPCPVCGSAEHPNLAQSEQQLP 528 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + +L + + E R + +T +LQ A L+Q + A++ Sbjct: 529 --TEEQLQQAQLAEDQAAEALTQARAKYSGLTTKLQEQIKVADELKQKIEQTAADSAALS 586 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 ++ E ++ L+ L + Q Q+ + ++Q++ Q Sbjct: 587 ----------------VEQLREQQQALKKLVETASHATQ------QLARLREQLQTWQVK 624 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 T T + E E + + Q A Q + L A+ + + + + + QS+ Sbjct: 625 EQTLRTAL------DTERERYQGVQTQVATLQGQLEQLLVAIPEQYRTVDSLNSAITQSE 678 Query: 706 ELPHCEET---VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 +L ++ V+ ++ EQ + + + + + A+ L +S Sbjct: 679 QLFAKQQQSINVIRQSHTNALEQDASAKAALVSAEANLSQTTELADNAKISLSEQLASSG 738 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F +QQA + A++ E L QL + Q + Q E L Q Sbjct: 739 FSEQQALIQAMLPEAQLQQLAAEINQYQQDCVANQANLAQLHEKLQQQS----------K 788 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E I +L + ++ ++ ++ Q + ++Q Q Q+ + G Sbjct: 789 PELEDIAAQLNLLQTEQQQAEQEWQALQGRVTQLTNTQKQLNDADSQAKQLEDEYAIVGT 848 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EAL 932 L + + G+K ++F + LD+++ A+++L + GRY L RK L Sbjct: 849 LADVANGQTGNKVSLQRFVLSVLLDDVLLEASERLQLMSKGRYRLIRKEERAKGNKASGL 908 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 E+EV D + + VR TLSGGESF+ +L++AL LS++V + ++D+LF+DEGFG+L Sbjct: 909 ELEVEDAYTS-KVRPVATLSGGESFMAALSMALGLSNVVQAYAGGIKLDTLFIDEGFGSL 967 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 D ++LD A+ L L ++G+ IGVISHV MKE+I +I + K Sbjct: 968 DQDSLDLAVRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDINK 1010 >UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z3_9FIRM Length = 1117 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 219/1117 (19%), Positives = 433/1117 (38%), Gaps = 100/1117 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L E IDFT+ GLF +TG TGAGKTT+ D I ALY ET Sbjct: 1 MKPLKLTLSAFGPYADETVIDFTQ--LGGQGLFLVTGDTGAGKTTIFDGITFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV--ELAR 118 + + AE FE K Y S + R + G + L Sbjct: 59 GVREASMLRSKYAKPETPTYAEYIFEYKDAVYTVKRSPDYERPKTRGTGMTTQKGEALLT 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +DG+ K+K+ + L GLD +FT+ +++QG F L A +ER+ + +L Sbjct: 119 FSDGRAPVTKLKEVNQAVTELIGLDMKQFTQIAMIAQGDFRKLLLADTEERSNIFRKLFH 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQA------------------------QASGVTLLT 214 T+IY I + + ++L + +G Sbjct: 179 TDIYKVIQEKLKFEAGGLDKAYKELLRSIRQYTEQVRYSTEDQLGQQWILMEKNGFEGNL 238 Query: 215 PEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEE 274 E ++ L L+ D K + ++ L + + + + + +Q L E E Sbjct: 239 EESLEILEQFLKADKDNLKAVNKQIKENDTELEKVNQLLGKAHKEADAKARKEQLLQERE 298 Query: 275 KAQPQLAALSL-----AQPARNLRPHWERIAEHS------AALAHIRQQIEEVNTRLQST 323 PQL A+ ++ I + L ++R++IE V+ +++ Sbjct: 299 GLLPQLEQAQKDAENGAKEPEEIQRLILSIQKEKENLKRYTNLENLRREIENVSKQIEKL 358 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 ++++ ++ L+Q+Q+ T + + ++ + +L Sbjct: 359 AIDSIALQNRQKEKKTVLEQKQKEYQTTDSAEKEKAETDFRKEKIDTLYAGVYKNCGNLE 418 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q +++ + + + A ++ L E+ +L +V +++ Sbjct: 419 FLQTKISELK-----IQSGQEEQLAKQIKKDLTDLEEKIVSGGNLEIKENSLVVCLQQIQ 473 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 +++ Q Q+ ++ + + +K ++ ++ EQ A LQ G Sbjct: 474 KIEDQ-QKRYQDLEKKAESKKKAYLTASQKRAEIKEILNKMEQAYLDGQAGILAAGLQDG 532 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK---------KLGEEGATLRGQLD 554 PCP+CGS HP + P Q + E + GE L+ + Sbjct: 533 MPCPVCGSVHHPKLTQTPKEVPTEEQLKKQKKLTEAAEKAASDASVQAGEAAGLLQRCRE 592 Query: 555 AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL 614 +T+ + + + ++ L + L I Q + Q + + L Sbjct: 593 ELTEGFKSYAAQFLPQEETQEILRNELSDHELCLFIKNQESSVQTGLEEIQKQKKVYQDL 652 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG-------------YALTLPQED 661 L ++ E Q H ++ + Q +E+R+ L + Y Q Sbjct: 653 LKKKEEFTTQSEQHAKEFQKLQISLEKRKSQLESIQEQLNNQLKEPVLSWIYEEDARQRM 712 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 + + L +Q+ ++ + + ++ L+ E + T +LE + Sbjct: 713 KTDPELLQDHSSETVYQKETGNVSQVLLQGKKAAEWLKQQQDILEQKQKDLTALLEQRKL 772 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD--------QQAFLAAL 773 + Q ++ T+ Q Q +++++ + + ++ Sbjct: 773 LEMQIGKTQTELTTITDQINQNQQQTAAEKSRYEQLQKQRENMEKELGERTKEEILSQIQ 832 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + + +LE + + R + +T+ +A + + +++++ E++ + Sbjct: 833 LKTEEQKKLEIHYKTVTEAREVLEKRMTELDSVIASLTEQLKE---SISISAEELNAQKE 889 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG- 892 Q+ + + ++ EI +L+ ++D + + +Q ++ + W ++ SL + G Sbjct: 890 NFAQQKKSLSENRDEIHARLEINSDM---YEKIRRQQTELLKTETRWKWMKSLSDTANGT 946 Query: 893 ------DKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEVVD 938 + Q D ++ AN +L + G+Y L R+ LE++VVD Sbjct: 947 ITGKARIMLETYIQMQYFDRILARANIRLMTMSSGQYELVRRKENKSRVGKTGLELDVVD 1006 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 + VR +TLSGGE+F SL+LAL LSD + S ++D++F+DEGFG+LD + LD Sbjct: 1007 HYNG-TVRSVKTLSGGETFQASLSLALGLSDEIQSSSGGIQLDTMFVDEGFGSLDEDALD 1065 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 A+ AL L+ + +G++SHV +KERI +I V K Sbjct: 1066 QAIRALKDLSQGSRLVGIVSHVAELKERIDKKIIVTK 1102 >UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHS1_9FIRM Length = 1067 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 209/1101 (18%), Positives = 416/1101 (37%), Gaps = 114/1101 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + S G+ +IDFT P NGLF ITG TGAGKTT+ DAI ALY T Sbjct: 1 MRPVKLIMSAFGSYAGKTEIDFTEIP---NGLFLITGDTGAGKTTVFDAITYALYDRTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR--------NQPDGNLQVP 112 + + E F + + Y+ + R P + P Sbjct: 58 GTRDGNMMRSQYAGEETSTYVEYTFLYQKKEYKIRRNPEYLRLGKRRYADGSPRYVKETP 117 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 +VEL DG I K ++ + + + GLD +FT+ +++QG+F L A+ +ER ++ Sbjct: 118 KVELT-LPDGSIFKGKKRETDQKISEIIGLDADQFTQISMIAQGEFLKLLLAESRERKKI 176 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEK------------------------------ 202 + T Y +I + +Q +LE+ Sbjct: 177 FSRIFQTRFYYRIQEELKKQAVQLYVKLEQNLQEMKLEMARVEYPSYKKDGGVWPEEVQL 236 Query: 203 --------LQAQASGVTLLTPEQVQSLTASLQVLTDE----EKQLITAQQQEQQSLNWLT 250 L Q + + ++ L+ + D+ EK + Q L Sbjct: 237 EKCTEENELIKQWKVIAGQDIPDRERISVILKEIIDQGNRWEKVCKKESSRAQTVLEDKN 296 Query: 251 RQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIR 310 R + + ++ + ++ L+ E+ P+ A R+ + Sbjct: 297 RLLKEAELLNQLFDSYERVLSRLEEKMPEKAKYEFLTGRIQTGKKAGRVLQEEKRYLEEE 356 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA 370 +++ E+ + +S R + + +Q+++ ++ + Sbjct: 357 KRLTELEVQERSLQKELQECRKQLQELT---DKQKEAGREKTEKETVLTEKKVRIQDAIL 413 Query: 371 QFSQQTSDREHLRQWQQQLTHAEQKLNAL--AAITLTLTADEVATALAQHAEQRPLRQHL 428 Q+ + +E L + +++ + + + L E+ T L ++ + Sbjct: 414 QYQSMNAKKEELDKITKEIKNYLNQSETILQKKEILQNNQKEILTFLKKYEKIETCINEC 473 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA 488 I Q + L + + + A E + K A+ + + Sbjct: 474 RNQKKHIEEQIRHYEDLDHQEERKEELKEDCERAKKEADREQKNYENAWAEY-EMKYHKF 532 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 + L+ GQPCP+CGS HP + A P + L E ++ Sbjct: 533 LNEQAGILALNLEDGQPCPVCGSREHPQIAALSDEAPTQAEVELAKAE------RDKKEK 586 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEH 608 +R ++ AQ + Q + + + + ++ + Sbjct: 587 IRDIKTEAFRKCLAGYQAAQEICLTLQKNIKDEAEDITGIGWKEKIQSLKRTLMETEKRL 646 Query: 609 ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLA 668 ++ + + L+ QI + +++ + Q L + Y + E L Sbjct: 647 KQLEEIFERCRTLKENQEQIADQIEKLEEKERKTSQSLTESKLMYTKLEAEYQAMEEKLP 706 Query: 669 TRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLA 728 + +++ L + EL V + + + Sbjct: 707 YKT-------------------MEEAEEHLREITGKLELVRNNYETVTRSLTEKQNKEKE 747 Query: 729 LHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQN 788 L QQ+T+ V + + +QK + ++ F+D++++ + M E+ L + EQ Sbjct: 748 LEGQQKTVSASVVQSQEEVQKKIRSYKQIIKEQGFEDEESYHSQCMTERELEEAEQWIGA 807 Query: 789 LENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGE 848 + + ++ + T + L ++ EQI +E+ + +L E + Sbjct: 808 YQKELQELEANRTLLEQQLEGKERK----------DTEQIAREIKEASGELEEIRKEYMK 857 Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN-----SLIGSKEGDKFRKFAQGLT 903 + +++ + R + ++ + + +Q E G L+ +L GS + D F + Q Sbjct: 858 LHNTNERNREIRDNLKRNFEKNSGLQKQYEIVGNLSKTANGNLSGSAKLD-FETYIQRQY 916 Query: 904 LDNLVHLANQQLTRL-HGRYLLQRK--------ASEALEVEVVDTWQADAVRDTRTLSGG 954 ++ AN++L R+ G +++Q + L+++V D VRD +TLSGG Sbjct: 917 FRQIIRAANKRLVRMTSGEFIMQCRDVEKLGSQGQAGLDLDVY-HMATDTVRDVKTLSGG 975 Query: 955 ESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 ESF+ +L++AL LSD+V + +D++F+DEGFG+LD + D A+ L+ L + I Sbjct: 976 ESFMAALSMALGLSDIVQNTAGAIHLDTMFIDEGFGSLDDVSRDQAIRVLNDLADKDRLI 1035 Query: 1012 GVISHVEAMKERIPVQIKVKK 1032 G+ISHV +KE+I ++ VKK Sbjct: 1036 GIISHVNELKEQIDHKLVVKK 1056 >UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH6_EUBSP Length = 1059 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 232/1091 (21%), Positives = 429/1091 (39%), Gaps = 90/1091 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + S IDF GLF ITG TG+GKTT+ DAI ALY +T Sbjct: 1 MKPIRLVMSAFGSYAEVTTIDFQG---VQQGLFLITGDTGSGKTTIFDAITYALYDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR----ARNQPDGN---LQVPR 113 + + E F +G+ Y + R DG+ ++ P Sbjct: 58 GARDGNMMRSQYASEDMGTYVEYTFSYQGKEYTIRRNPEYIRLGKRRYADGSPRYVKEPS 117 Query: 114 VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DG + K ++ + + GLD +FT+ +++QG F L+A+ KER ++ Sbjct: 118 KVELILPDGSVFQGKKRETDQKIEEIIGLDSVQFTQIAMIAQGDFLKLLHAESKERKKIF 177 Query: 174 EELTGTEIYGQISAMVF-----------EQHKSARTELEKLQ-----------AQASGVT 211 ++ T +Y ++ + + + R E+E+++ + + Sbjct: 178 TKIFQTRLYYRVQEELKKNAGRLYYQLEDNLREIRQEIERVEVEKALPSKERWEEIKSLA 237 Query: 212 LLTPEQVQS-LTASLQVLTDEEKQ-------LITAQQQEQQSLNWLTRQDELQQEASRRQ 263 +L E+V++ L LQ EK+ L Q + ++EL Q + Sbjct: 238 VLPYEEVKATLEEILQEGRALEKEKQKISDRLAKRLDQLKSKKLEAEARNELFQTYENMK 297 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 ++ Q+ E+E+ Q L+ A+ A E +A+ L R+ + +L+ Sbjct: 298 ESWQELGKEKERYQESERRLAQARRAEKASSAEEALAQARMNLDRGRKTLRITEEKLEEA 357 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 L +++ +K+ E + + R + A QQ + + L Sbjct: 358 QILAEALKAVKSKKEQEFLDWKAECEAGI---IRIQDALPRYEQIEALKEQQEALGKALE 414 Query: 384 QWQQQLTHAEQKLNALA-AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRL 442 + Q L AE K + L + A E+ + E +++ + + Q K L Sbjct: 415 KKQGVLQEAETKEDGLKHSREEARRAQELYEVSKMNVEALGMKKEQCS---HRLLQLKEL 471 Query: 443 AQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQA 502 + ++ +E ++ E R+ Y A + Q + L+A Sbjct: 472 KGSFDTLLSLEEECRRKRCRSEEDRKSYLSA----AALYEAKYQAFLDEQAGILAQGLEA 527 Query: 503 GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 G PCP+CG+TSHPA++ + P + E + E ++ Sbjct: 528 GDPCPVCGATSHPALQPLKEGAPAQQEVE----EARESRNLAERRRDASAAAFQEAAIRY 583 Query: 563 DENEAQSLRQDEQALTQQ-WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 + LR + + + + S I + L+ + +A + + +L Sbjct: 584 GSGKNAFLRGYRELTEDEPDEGMLPSEAICHRILEAERQCQEAYHKVSWAYEKADKEAKL 643 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + +QI ++++ L Q + ++ LA + Q Q Q Sbjct: 644 HEEAKTLERQIEDQLAVLKEQHSKLEAE---QGELKKQYQQIQADLAAKCQGLPFLSQEQ 700 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + R+ +L L+ L Q+ E EE + R+ L Q+++ Q+ Sbjct: 701 A-----KERLTELEDELQLLKQAYERAKAEEKESMVTVRR-------LEGQKKSSQEAVE 748 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 + ++ AL+ F D+ A+ AA M E+ LEQ Q + + ++ Sbjct: 749 ELDREAGIRSEAWNQALKVQGFADEAAYQAARMPEEETALLEQKIQEYRVKVNETAGMIK 808 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 L + D L E Q + +L +++ LKQ D + Sbjct: 809 TIEAQLEGMEPADTDKILEEIQKAETDAQAVQNESMRLYSMNRKNQGVKEHLKQYLDKKG 868 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HG 920 ++ + + +++ SL G+ + D F + Q ++H ANQ+L R+ Sbjct: 869 ILRSQYEMLENLSRTAN-----GSLSGTVKMD-FETYVQRQYFRQIIHAANQRLVRMTSN 922 Query: 921 RYLLQRK--------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV- 971 ++LQ + L+++V + +VRD +TLSGGESF+ SLA+AL L+D+V Sbjct: 923 EFILQCREVGNLSSQGQAGLDLDVY-HMASASVRDVKTLSGGESFMASLAMALGLADIVQ 981 Query: 972 --SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 + R+D++F+DEGFG+LD + A+ L L + +G+ISHV +KE+I +++ Sbjct: 982 NTAGAIRLDTMFVDEGFGSLDDTAREQAIRVLHDLAGDKRLVGIISHVNELKEQIDCKLQ 1041 Query: 1030 VKKINGLGYSK 1040 V K +K Sbjct: 1042 VTKTEKGSQAK 1052 >UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteobacteria RepID=A0YBB3_9GAMM Length = 1019 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 235/1071 (21%), Positives = 429/1071 (40%), Gaps = 86/1071 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL L+ G+ +DF SN LF I G TGAGK+++LDAIC ALY +T Sbjct: 1 MKPLSLTLQAFGPFAGKESLDF--AALGSNPLFLINGATGAGKSSILDAICFALYGQTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL------QVPRV 114 + + +EF + + YR + + + G + Sbjct: 59 AERDPAQMRCDFSEPSLLTEVNLEFALGTKHYRVRRVPQQNKPKTHGEGITNHAPEAQFW 118 Query: 115 ELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 EL DG +L K V D + L GLD +F + M+L QG+F L A +R ++ Sbjct: 119 ELDGTKDGNLLVSKKVTDATQAIKELIGLDVEQFRQVMVLPQGKFRELLLADSSDRQKIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP--------EQVQSLTASL 225 +L IY +I + + + +E Q Q G+ + +L L Sbjct: 179 SQLFQASIYKRIEESLKSRASGIKQAVENHQNQIRGILQAAEVNTENEVANSLATLAPEL 238 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 V D + ++ + + E S +Q+ L + + +E + L Sbjct: 239 SVALDVRTKAEAEKKASETAKEQAEWLVNRLDEFSYKQKQLAEYVEQESVINAKQQKLDK 298 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 A AR ++P + + +L + + + + + +R + Q+ L + Sbjct: 299 AINARAVKPMFASMQAEEGSLDSLEKALASSADQWKQAE-----LRQVTSVQAFNLAKTN 353 Query: 346 -QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + L ++ Q + + + T E L + LT +Q+ L Sbjct: 354 AKELGELTKQQLTLEQLEKQYHELQQAQGRLTIADEDLNASKMVLTQNQQQQATLNNELE 413 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 A++ L E +Q L++ + ++++L +++ E+ + Sbjct: 414 --VAEQSNQTLQGELENLAGQQILLSQLDTQLAERRQLE----ISRDLETERAESEIICQ 467 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + + +E +Q E +L+ +PCP+CGS HP+ A + Sbjct: 468 QDYRVAQESFKQAEVSAKKTEMSWHAGQAALLSRELKHDEPCPVCGSVEHPSPAADNSEL 527 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 ++ V K T R +D N + L ALTQ +A Sbjct: 528 TD---------KSAVDKARAVAETARRVMD----------NSREGLDTAASALTQT-RAE 567 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 L I L PL +P Q +H + L+ Q ++ + + Q Sbjct: 568 RERLAILLGPLAS-EPLAVLQAKHSANVEALNTLLAKQDLQRQLQARLAVIKAE----QV 622 Query: 645 LLLTTLTGYALTLPQEDEEESWLAT-RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 LL TL A + + +E+ + Q Q ++ A+ ++ ++ + L Q Sbjct: 623 LLTKTLETLAGEVSEHNEKVVRIRAGVDQLLSVLSQVLHKPDAITEQLAEVALHMRRLSQ 682 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + E+ + +C +Q L++Q + A+ +A A + AL S+F Sbjct: 683 TLEVAEKAQA-------DTRSECDKAAAQHAALEKQLIEQAKQTSEATAAWHEALADSLF 735 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 F A++ E +L+ + + + V Q +A+ Sbjct: 736 VTVDDFRLAVLAENEQLELKLTIEGYRTELSAIKGAVQQIQADIAE----------RTRP 785 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 + I+ L + ++ + T + + Q D + + + ++ + + + G L Sbjct: 786 DLIAIEAALNEKNELYKSADTLWRTLEARSNQLKDIQVKLERAHEKNELLEAEYKITGTL 845 Query: 884 NSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALE 933 + + + G+K ++F + LD+++ A+Q+L + GRY L RK LE Sbjct: 846 SDVANGQTGNKISLQRFVLSVLLDDVLIQASQRLNLMSKGRYQLVRKEDRAKGNKASGLE 905 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 +EV D++ R TLSGGESFL +L+LAL LSD+V + ++D+LF+DEGFG+LD Sbjct: 906 LEVEDSYSG-KTRSVATLSGGESFLAALSLALGLSDVVQSYAGGIKLDALFIDEGFGSLD 964 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 E+LD A+ L L ASG+ IG+ISHV +KE++ +++ V+ + + Sbjct: 965 PESLDLAVRTLIDLQASGRMIGIISHVTELKEQMALRVDVESGRVGSHITI 1015 >UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0HHE7_SHESM Length = 1018 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 238/1073 (22%), Positives = 408/1073 (38%), Gaps = 90/1073 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL + IDFT +N LF I GPTGAGKTTLLD IC ALY +T Sbjct: 1 MKPLSLSMSAFGPFASTQTIDFTE--LGNNPLFLINGPTGAGKTTLLDGICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 M D+ F++ YR + R + G +Q +L Sbjct: 59 NEREGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLY 118 Query: 118 RCADGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + A I+A KV D LTGLD +F + M+L QG+F L A K R ++ Sbjct: 119 KIAPDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASLQVL 228 +L T IY +I + + R +++ +A+ G+ E L+ Sbjct: 179 SQLFQTHIYKRIEDTLKAKAADIRNLVKEQRARRDGILQTAALTSDDELTAELSRIEPEF 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL---AEEEKAQPQLAALSL 285 + +L +L E +R Q+ +AL ++ + Q L + Sbjct: 239 AAATAAKEQSVAAHLAALKQRDSAQQLFAEFTRLQELQAEALSLNEQQAQIATQTTRLEV 298 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 A+ A ++P + + Q + L + L S AA++ L+ + Sbjct: 299 AKQALRVKPLLDNALSREQEASVAAAQRDSAQLTLDAAK-LALSHAETAAQEIIPLEHKL 357 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + + E A +Q +H + Q+ A L Sbjct: 358 REVEQQNSHLSALVPQLAEFASLEQALAQAKEILQHTKLQGQESKTALATLVEQRGHCEN 417 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHG--QIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + + Q A + L+QH L Q ++A Q ++ V + N Sbjct: 418 QLPALQSQSEQQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGVLEQVGLQGKALNTQY 477 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 YK + + + L + L+ +PCP+CGS++HP Sbjct: 478 QAASTAYKSLQ--------LKWFQGQAAILARE---LKPHEPCPVCGSSTHPQPAVSHED 526 Query: 524 EPGVNQSRLLALENEV--KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P Q + + L + A RG + Q Q+ + A +L + + Sbjct: 527 LPTDLQLQAAQDAEALALDNLNKARAEYRGLQKQLEAQQQQANDLATALGDKVELSLESH 586 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 L + DD L + + L+ Q ++ + ++ E Sbjct: 587 SQTLERLMQQAKQADDAAQALQLLQQQIKTLQQQESTLAQQLELE------RERYREQEG 640 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + + L L AL +P+E L Q+ Q +L ++ +I L + Sbjct: 641 KVERLSGQLAEKALRIPEEYRTLDVLN------QAIANNQQQLEQIKRQIDVLRTAQQQA 694 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 Q + +E E QT + Sbjct: 695 TQQSVAAQTALSAAIERCHATVELQAQAQQTLQTALDN---------------------A 733 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F D+ A AL+ ++ + L + K+ Q Q+ +TQ L++ + Sbjct: 734 GFIDRDALREALLTDEQMQTLAEGKETYHRQCALNQSQLTQLTTKLSE----------ST 783 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + ++ ++ L + +L+ ++ +L + + Q + Q+ + + G Sbjct: 784 SPDLDALEALLTERLAQLKNAEELWSQLNTRLTLLNNTQTQLAVVDQKAKSLEDEYAVIG 843 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EA 931 L + G+K ++F + LD+++ A Q+L + GRY L RK Sbjct: 844 TLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNKASG 903 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 LE+EV D + + VR TLSGGESF+ +L++AL LSD+V + ++D+LF+DEGFG+ Sbjct: 904 LELEVEDAYTS-KVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGFGS 962 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD ++L+ A+ L L ++G+ IGVISHV MKE+I +I + K + K+ Sbjct: 963 LDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKV 1015 >UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV7_9LACO Length = 1040 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 232/1079 (21%), Positives = 420/1079 (38%), Gaps = 76/1079 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ K E IDF + +F ++G TG+GKTT+ DA+C AL+ +T Sbjct: 1 MQPLKLHLQYFGPYKDE-VIDFQK--LTGTAVFLVSGNTGSGKTTIFDAMCYALFGQTTN 57 Query: 61 L-SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQN-----RARNQPDGNLQVPRV 114 + + E F KG+ Y+ R + +V + Sbjct: 58 DQDRDATALRSDFAPKNQETCVTFTFSHKGQTYQITRQPKQTIMGRGNKLVEHGTKVSLI 117 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 ++ + K+ + L L +F + +LL QG+F FL + ++ LL Sbjct: 118 YPLENSEPNEI-SKIGPANQFIEQLLNLTRDQFKQIVLLPQGKFRQFLESSSSDKETLLR 176 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQA--SGVTLLTPEQVQSLTASLQVLTDEE 232 +L T Y Q +A + Q + ++ + + L QS L + + Sbjct: 177 DLFNTHFYEQWAATLKSQLTEQQQAYKQTLDKLSVTKANLADVNGDQSTAEWLSQVEQKI 236 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 K + + Q + + Q AL QA+ E++KA L L P N Sbjct: 237 KDRQSDIENISQEITRQQLVTNQLNQQLTNQHALVQAMGEKKKAAADLLDLQEQAPQIN- 295 Query: 293 RPHWERIAEHSAALAHIRQQ---IEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 HW +I E + + ++T+L L A + K E ++ Sbjct: 296 --HWRQIIERLTWYQEHQADYLNYQSLHTKLAENQRLIADKQAEVRKLRIEQKEVDTVAE 353 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA---EQKLNALAAITLTL 406 Q+++R R+ Q Q + R+ L+Q Q +Q+L L L Sbjct: 354 QLKQQNERIRKLQERKNVLENQLPQ-YTRRDQLKQAVQTGEKQFNGQQQLVTSQKEKLEL 412 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQK--RLAQLQVAIQNVTQEQTQRNAALN 464 T + + + + H + Q QK + Q + E +++ L Sbjct: 413 TQQRLQRVTDELDQLGEVHDHELKFENQRHQLQKLQEIVADLQKHQRKSNELSKQQRTLQ 472 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + + ++ Q + + QL+ G PCP+CG+T HP + Sbjct: 473 KWLDQQQQLITQSQTTYDDLKDAYLRGEIARLVHQLKPGSPCPVCGATDHPHPAPLPKDD 532 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 V + A + +L E A + Q D Q+ + L L A Sbjct: 533 RVVLNDEVEAANQRLSQLQREQAAKKSQFDDQKHQVNEEMATINELLVQLSQLMNDDFAT 592 Query: 585 TASLNITLQPLDDIQPWL--DAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 ++ + L + +E + +LL+++ +L + QQ + QQ++++ Sbjct: 593 IDEAKEKVRSFSETVNKLRQNLLNEKRQTQKLLTEQSDLNQRQTEEQQQFTEAQQELDKL 652 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 Q L T Y + E + + WQ N Q Q+ Sbjct: 653 QMQLTTDRATYQAVVNDLQTEYEDAQSATAQVGEWQDEINHFQQHQQNTQR--------- 703 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 ++ ++ E ++ L+ QTLQ+Q + + Q LQ+ A + L S Sbjct: 704 --------KQVMLAERVTNNQQELTGLNQLVQTLQKQIMESHQKLQQQLADYSPELDDSF 755 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + + LT L+ Q+ ++ + Q L+ + + + Sbjct: 756 WTWAGGHIN------ELTTLQSRVQDFHTKQTRLQALIQRLEKQIGTQSM---------- 799 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 VEQ QELA+ ++L E G++ +L+ Q + +Q ++V+D Sbjct: 800 PNVEQTSQELAEEQRRLAELQRQSGQLSNELQNILKTHDQVAKINRQQNSELKRVQDLQT 859 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS---------E 930 ++ ++ +K ++ L ++ +AN +L +L +GRY + Sbjct: 860 VSDVMNGNTDNKLSLERYVLQSYLTEVLQVANGRLAKLTNGRYAFKLSDEAARGNGTKWS 919 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 LE+ V D A R RTLSGGESF+ SLALAL L +++ S ++++LF+DEGFG Sbjct: 920 GLEINVYD-DNAGQERSVRTLSGGESFIASLALALGLGEVIQERSGGIKVETLFIDEGFG 978 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 +LD E L+ A++AL ++ + IG+ISHV ++ +IP Q++V NG+ + + + Sbjct: 979 SLDQEALEQAMNALQSIK-GYQMIGIISHVTELENQIPNQLRVISRNGVSHVEYRQEIS 1036 >UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV5_PETMO Length = 1039 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 206/1083 (19%), Positives = 444/1083 (40%), Gaps = 88/1083 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L+ + E +IDF + ++ LF ITGPTGAGKTT+ DAIC ALY Sbjct: 1 MKPIKLKFQAFGPFLEEQEIDFNK--LRNDTLFLITGPTGAGKTTIFDAICYALYGNGSM 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + E EF+ K + + + R++ DG Q + + Sbjct: 59 DERGDAIARSHFADENTDTYVEFEFQFKDKIIEVSRTPSYERSKKDGEGTTKQNSQASIK 118 Query: 118 RCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +G+++ VK GL+Y +F + +++ QG+F F+ A ERAE+ ++ Sbjct: 119 IYQNGELILHETGVKKVNSKVEEYLGLNYEQFKQIVMIPQGEFRKFITANSNERAEIFKK 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTL---LTPEQVQSL----------- 221 + IY + + E K+ L++ Q + + L E+ + L Sbjct: 179 IFDISIYERFEQKIDEIFKNIEKGLKEQQQKVRNILETINLESEEYKQLLKEENIDPENL 238 Query: 222 -----------TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL 270 S + ++ Q Q+ +L + + +EL ++ ++ +++ Sbjct: 239 IDQLTKEIKKRETSKEETEKQKSQKQDKLQKLNTNLEKIKKTNELIEKKETLKKEIEELQ 298 Query: 271 AEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 + Q + L+ + A+ + P+ ER E+ L + Q+++ L +M + I Sbjct: 299 QNSKYIQEREELLNRLKKAKEILPYEERYVEYLKELNDKKNQLKDQQDILDKSMEEKQRI 358 Query: 331 RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 + + Q+ + + ++ + +++ E +++ Q++ Sbjct: 359 DEKLPEIEKQYQKISAVEKEIEDLNQKLDKYVEYKNLIKEYNTKKKLLDEKVKESQEKDK 418 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 + L ++ +E E + L++ ++ + LA L + Sbjct: 419 ELSETQGKLEQNEKYISENEDINVEILKNEINT-NEKLLSAANELSKNYEELALLHKDYK 477 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 V +++ + + +R+ +KT + L+ G+PCP+CG Sbjct: 478 KVKKQKEEIEIEIQNLREEQNKKTTDFIKSQ-----------AYHLATTLKEGEPCPVCG 526 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S HP+ + + L + ++ + +E A + + ++ + + E Sbjct: 527 SLVHPSPAKSSG--KLITEKELEEINQKLNEKEKEKAMILRNYEDVSNKYSQ---EVSLF 581 Query: 571 RQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQ 630 + + + + ++ Q S I + I+ D ++ +++ + + + N+ Sbjct: 582 KSEYKRICEELQIPQESEYIYTHIQNLIKILEDRLNQQKQEYGQKIKIYNKVKSLKNDNK 641 Query: 631 QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 +I + +++E++++ L + + + + + + L + + +++ Sbjct: 642 KIKEEIKELEEQRENLRKIIDESRSKIIELETKITNLKEQLENKTE--------NEIKSE 693 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 IQ+ + + + E E + E +TL + ++ A Sbjct: 694 IQEKRKFIHNIKTTYEQKREEANRISEIINSS-------KGTIKTLTEDITKLDDQVKNA 746 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 + +FD ++ F +QQ + + LE Q + + + QTL+ E+ Sbjct: 747 EQKFDQMVEKMGFKNQQEYKILKEQINLIETLEDEVQKYKEELKNKQTLLIDLEESTKNL 806 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + + I E+ Q +++ E ++ + ++K + +T++++I Sbjct: 807 K----------KIDETPIANEIDQLQKEIEELIKNETNLEYEIKHLKGTKTNLETVIKEI 856 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR- 926 + ++ L + + K+ + ++ AN +L +L GRY L R Sbjct: 857 EKQEKEYSTIKNLRDVSKGDNNTRISLSKYVLAYYFEEILAQANLRLNKLTDGRYHLHRS 916 Query: 927 ------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRI 977 + SE LE+ V D + R+ +TLSGGESF +LALAL L+D+V + + Sbjct: 917 SKVLDARKSEGLEIMVFDIYTGKE-REIKTLSGGESFKAALALALGLADVVQSEAGGISL 975 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 D++F+DEGFG+LD+ +LD+A++ L LN++G+ +G+ISHV +KERI +I+V Sbjct: 976 DTIFIDEGFGSLDTNSLDSAIEVLTELNSTGRMVGIISHVSELKERIKSKIEVIPGKTGS 1035 Query: 1038 YSK 1040 Y K Sbjct: 1036 YIK 1038 >UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R7R6_ARTAT Length = 1004 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 228/1087 (20%), Positives = 403/1087 (37%), Gaps = 135/1087 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L ++ IDF + ++ GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLDIEAFGPFATPQHIDF--DHLSAQGLFLLNGATGAGKTSILDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAF----WSQNRARNQPDGNLQVPRVEL 116 + AE EF +G + W + AR + Q + L Sbjct: 59 ARQEGKRLRSDHAAPGAEPRVVCEFSARGRRFEVTRSPAWDRPSARGRNGFTTQQAKTLL 118 Query: 117 AR--CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + + + + + G+D +FTR ++L QG FAAFL +K +R ELL+ Sbjct: 119 RERVAGSWEEKSSRNDEVGAELSDVLGMDREQFTRVVMLPQGDFAAFLRSKANDRLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL------TASLQVL 228 +L GT+ + + + Q A +++ ++ + + L T++ Sbjct: 179 KLFGTQRFEAVERQLVHQAAEAARAVQENASELKLLLDRVASEQDQLGLPAADTSAAGTE 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ------PQLAA 282 +E + A + + W RQ+E + S + ++ +EK+Q + Sbjct: 239 PGQEPEAWLAGVEAEVEAEWKRRQNEAAEAESLSSRLMEHFQEAQEKSQRHGRLGAAMQR 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNT---RLQSTMALRASIRH------- 332 L + A + + A + Q+E V++ +L + A A +R Sbjct: 299 RVLLELAAPRALENKEMLGKHRRAAVLSGQLEAVDSAARKLHTASARAAGLREKLDAAGL 358 Query: 333 HAAKQSAELQQQQQS---LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQL 389 AAK + L+ + S L L E R A R + + EHL + Sbjct: 359 DAAKPTIALETVKASCAVLEARLPEEQRLEGITVRLAARRGELA------EHLSAAEAAA 412 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 T +Q ++A+ L + L A+Q R+ ++V R A + Sbjct: 413 TVVDQLREEVSAVELEI------QPLEPLADQLAEREREATAAAELVGIVARHATAASEL 466 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLC 509 +T + +A ++RQ++ + + A L++G+PC +C Sbjct: 467 DVITGKHLHARSASQDLRQKWLDVRE-----------LRLANAAGELAAALESGKPCAVC 515 Query: 510 GSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 GS HP + +L + + ++ + E Sbjct: 516 GSEEHPNPA----------------------QAVRTALSLAQEEEEARERFEASERALGL 553 Query: 570 LRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 L + + Q + A + + S +L+ + A Sbjct: 554 LAEQVSSAAQVLAGLVAQGGSADAAAAESTLADARAAALAARTAEAS-LEKLRVRHEALI 612 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 ++I+ Q++ + + Q E+ LA + + S + R L A + Sbjct: 613 KRIVLAQEEHDASVGAAAQASAAVHVLQEQCVALETDLAGLRGDFSSLRDRLEALEAERG 672 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 +Q L + A Q+ Q Sbjct: 673 LLQAAVDADRELER---------------------------------------AEQARQD 693 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 A A D AL S F ++ + LE+ + + + + L LA Sbjct: 694 AAASLDKALSESGFASADDARREILSPADVVGLEKDLADFDAESSRLDELFGSEDLVLAA 753 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + + L + + + A R S G + A R + Q+L Q Sbjct: 754 KEASIGEHPLG-EAELAESKLHAANAADDARAKALSAGLAGKSAAAVARFRTEYQSLAQA 812 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRYLL 924 + + + L + + +R + L+ + A+++L + GRY L Sbjct: 813 GREPRNRAQMLAELADTVRGSGDNSYRMSLNAYVLAARLEQVATAASERLVAMSDGRYTL 872 Query: 925 Q-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 Q R A L +EVVD W RDT TLSGGESF+ SL+LAL L+D+V + Sbjct: 873 QHTDAKAARGAKSGLGLEVVDEWTGQ-RRDTSTLSGGESFMASLSLALGLADVVQQEAGG 931 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 I++LF+DEGFG+LD + L+ +DAL+ L G+ +G++SHV MK+RI Q++V K Sbjct: 932 VDIETLFVDEGFGSLDDQALEQVMDALEGLRDGGRVVGLVSHVGEMKQRITNQLQVVKGR 991 Query: 1035 GLGYSKL 1041 ++ Sbjct: 992 HGSSVRI 998 >UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus RepID=SBCC_STAES Length = 1009 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 184/1060 (17%), Positives = 423/1060 (39%), Gaps = 93/1060 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + ++N E IDF E ++ LF I+G TG+GKT + DAI ALY Sbjct: 1 MKPLHIVMENFGPFIKET-IDF--EQVETDQLFLISGKTGSGKTMIFDAIVYALYGMAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + +F+V + ++ + + + ++ + Sbjct: 58 KTRKEGDLRSHFADGKSPMSVIYQFKVNNQTFKIHREAPFIK-EGNITKTQAKLNIYELV 116 Query: 121 DG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D ++ KV + L G++ +F + +L QG+F FL + K++ +L L Sbjct: 117 DNQFELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQSILRTLFN 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQA------------SGVTLLTPEQVQSLTASLQ 226 +E + +I ++ E K + ++E Q + L + ++ Sbjct: 177 SERFDEIRHLLLENVKQEKVQIENRYTQIENLWNDIDTFNNDELALYKELESSQTDKMIK 236 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 + +++ N +T++ + + L + + + + + L Sbjct: 237 KFPQFNDYGCKILKSFEEAKNKITKELDDLNHKYKVNVELSENTKKLKAEKIKFDDLKKE 296 Query: 287 QP-ARNLRPHWERIAEHSAALAHIR--QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q L+ + I E + + Q +++ L S + + Q+ Sbjct: 297 QNYIDKLKQELKMIQESKVLITYFTRLQSLKKDKDELVSLHEQSKLNETNYHNEIKGFQK 356 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 Q + L+T E +F Q+ + + Q + S + ++++ + N L Sbjct: 357 QLEHLSTRENEITQFNQYLEKNQVFFNQLDKIISSYQQKPVIEEEIKRLYSEYNDLITKK 416 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 LT E+ A + + L +I+ + +R + + + +++ + L Sbjct: 417 EELT-KEMNNKNKDFAIIEHYTEEIYKL-KKIIDESERQKKDEKLFDKLQLDKSSYLSKL 474 Query: 464 NEMRQRYKEKTQQLADVK-TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 E +++ E + ++ T+ + + + ++ + G CP+CG+ H E Sbjct: 475 KEKKEQLNEIESSITNIDATLIDLNDKKDFVNEIKSAMSIGDTCPICGNEIHSLGEHIDF 534 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 +++ LE++ K+ +E + +++ + + Sbjct: 535 ESIAQKNNKIKRLESKKVKIRDEIIKIETRIEELNHR----------------------- 571 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + L+ + + ++ + L ++ Q+ Q I + + E++ Sbjct: 572 ----------------ENELNCEKQEKKDISKLQKQLNHLNQLKDEQQSINKLVENFEKQ 615 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++ ++ + + L L +++ ++ L + + + Q + + Sbjct: 616 EKEIVNKIHQFDLDLSRKNTQKEKLEIQINDFERHSQF--------SSVNDFETYYSHAK 667 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + E E + +++ + + Q+ L + ++ + + + + +Q Sbjct: 668 KQVETYEYENEKTKDKLNELNNKLKIEMNDQKHLTENLTQTSKEINNLELKMEKEMQQLG 727 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F+ +A ++E+ + + + + E + + Sbjct: 728 FESYDQVKSAADLSAQKDEIEREINIYNKNYQSYEIEINRLKELVKGKK----------L 777 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + +E+++Q + +T+ KL E + I ++ +++ + + ++Q + + ++ Sbjct: 778 LNLEKLRQSIEKTNLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQKEIFL 837 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEV 934 L+ ++ K K + L+ ++ ANQ+L+ + G RY L R+ + LE+ Sbjct: 838 LSEILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGLSGLEI 897 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 +V D + ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGFGTLD Sbjct: 898 DVFD-FHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGFGTLDQ 956 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 ETL+TA+D L L +SG+ +G+ISHV +K+RIP+ ++V Sbjct: 957 ETLETAIDTLINLKSSGRMVGIISHVSELKQRIPLILEVT 996 >UniRef50_D0L9F7 DNA repair exonuclease, SbcC n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L9F7_GORB4 Length = 989 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 217/1073 (20%), Positives = 387/1073 (36%), Gaps = 129/1073 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ LR+ G+ +DF + +++GLF + G TGAGKTT+LDA+ AL+ P Sbjct: 1 MRLHRLRMCAFGPFAGDTTVDF--DELSADGLFLLHGRTGAGKTTVLDAVAFALFGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 + ++ + E+E V G R S + R + G R L Sbjct: 59 ARDTNRRLHSDHALPEHVPEVELEATVGGRRLRIIRSPDHHRPKRRGTGTTKVNARASLT 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ + + L G+ +F + +LL QG+FA FL A ++R LLE L Sbjct: 119 WLDGSGPDLTRLPEIGDAVTRLLGMSADQFFQVVLLPQGEFARFLRATSEDRERLLERLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------TLLTPEQ--------VQS 220 TE +G + + + + + L + A V E ++S Sbjct: 179 DTERFGDLEEWLRTEARESSAALTRRTAVIDRVAGQIVALGGAEAPAEPDLAWAQGCLES 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + + + + Q++ + R+ EL + + + L + ++ Sbjct: 239 ARSEAEQARAALEAARREVTEAQRAHDDGRRRAELHRRGVQAAERLSRLDDGQDDLAAVT 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 A L+ A+ A L P + +A + L + A A Sbjct: 299 ATLAQARRAAPLAPLLDEHELAAADAVTAERTWSRARDALVTLPGGAALSDADDATL--- 355 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + S+++W QE R+ AG A S+ + ++L + L AL Sbjct: 356 ----RDSIDSWTQESGRWEPLAARLAGRPAIVSEIDTLTAQFDDTARRLAELSEVLAALP 411 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 D A A+ LR + L Q +K + +A V Q + Sbjct: 412 --------DRRDRAQAELTRAVELRSRVPGLEAQRERAEK-VTTALLARARVDQALERIT 462 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + R+ + E +QL ++++ L G+PC +CG+T HP Sbjct: 463 TQVLVAREAHLETREQLVELRSR----RVAGMAAELAGGLVDGEPCVVCGATVHPEPAR- 517 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 P A E + A RG++++ Sbjct: 518 ----PDERGHVGEADEAAAAAAEQAAAVARGRVES------------------------- 548 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 A+L + LD++ +D E RL ++ + + +++ Q+ +E Sbjct: 549 ---EQAALEERRKSLDEVIGAATREDTEELLQRLSTELADARRA----AERVPALQRAVE 601 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 + T A + + LA+ +++ E T + + + L Sbjct: 602 AAAAEIDTVRADVATLDSAQSRRQERLASLREDLGELDVAVAEATGGRLSVTERRQELAD 661 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L ++ + + + A +A + A Sbjct: 662 LCEAA-------------------------GRLRDAVRARDAARSRRDEAGKRLTARCVA 696 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + FDD A +AL +++ Q E + +QA L ETLA Sbjct: 697 AGFDDADALRSALASPESI-------QEWEARVQQAIGLRAAAQETLADADIQDALAAEH 749 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 + V + + L Q +++ +A + + + Sbjct: 750 VDVAL--LATALDTVRQAHDRAAGRHTIAARRVADLERFVADFWAAADALAPLRDRHAEL 807 Query: 881 GYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS------ 929 L L+ R + L+ ++ A+ +L ++ GRY + Sbjct: 808 AGLAELVSGHGQNSRRMSLRSYVLAARLEEVLVAASARLHQMSSGRYEFVHSDAVGPRGR 867 Query: 930 -EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEG 985 L +EV D + VR T TLSGGE+F SLALAL L+D+VS +D++F+DEG Sbjct: 868 RGGLGIEVRDEYTG-TVRATTTLSGGETFFASLALALGLADVVSAELGGRVLDTIFIDEG 926 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 FGTLD E LD + LD L + G+ +GV+SHV ++ERIP Q++V + + Sbjct: 927 FGTLDPEALDLVMGVLDELRSGGRVVGVVSHVGELRERIPAQLEVVRRDNGSS 979 >UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME Length = 1014 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 249/1061 (23%), Positives = 408/1061 (38%), Gaps = 69/1061 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ ++L L+ + +DF+ F LF I GPTGAGK++LLDAIC ALY ET Sbjct: 1 MRPITLTLQAFGPFASQQVVDFS--AFGHAPLFLINGPTGAGKSSLLDAICYALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRV---- 114 D+ E FE+ ++ S ++ A+ + +G + Sbjct: 59 SERTGDQMRCDYAPDSVLTEIEFVFELHQRRFKIIRSPDQQVAKQRGEGTTKKSHAASLI 118 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 EL + K+LA K L GLD +F + M++ QG+F L A KER ++ Sbjct: 119 ELIANEEEKLLAHSPKRVAAAVLELIGLDVKQFRQVMVIPQGKFRELLVANSKEREQIFG 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEK 233 +L T IY QI +FE+ R + E+ Q G + ++ + L +L + K Sbjct: 179 QLFQTHIYTQIERELFERAAEIRRQKEQFDQQIKGALNVVAMASEEELQQALTSIEPSLK 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + QQ QQ L+ L +Q QE + +Q E+ + Q A L Q Sbjct: 239 NSEQSHQQAQQKLDVLKQQWHAGQELQAKFSQQEQLALEQAQLTAQQAELDEWQVRLQQD 298 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 R+ L+ +RQQ+ ++ + + + QQ +Q+ Sbjct: 299 QKAARLDLPYQQLSDVRQQLTLAEQAQKTHQQAVSQTQQQVTVATVAYQQAEQAAQQIEA 358 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 + Q + W Q+ L + T +Q L + + A Sbjct: 359 LSQQLYQLESMGKKWVELEQQRHQQTNALAALKAAQTQHQQLKKHLTDLEQQRQDQQQAL 418 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 + L Q + Q N Q+ Q+ + Q+ + Sbjct: 419 ERVISQRSGLETKQLQCSQLNEHIQLRVNQQSLTQQINQLQQAYQQAGQAYQQAQQQTLQ 478 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 Q AD + L +L G PCP+CGS HP + + +Q + Sbjct: 479 ASQHADQLEFYWHSNQAAELA---QKLAPGNPCPVCGSEHHPHIAQFSGQMVSKDQVQQA 535 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 + + E KQ Q+ EN +Q + +Q + Sbjct: 536 RQAQQHHQANETEQ---------LKQYQKAENNLSHYQQQLKQFEEQIEH---------- 576 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 P L A + L +R L ++QQ+ Q L Sbjct: 577 ---KALPELTALQHQHQALTAEIERLTLLNPQT--------FEQQLSQITAALQQAQLQL 625 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + ++ Q + S Q E+ + Q+ + + E Sbjct: 626 EQQQHKVEQASKAEIEAQTKVTSLQ---AEVASEFTDAAQVREAYGRVKKQITALQQAEL 682 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 + + + + +QQ S Q+ ++ AL S F + +L A Sbjct: 683 QARTQLAAAQQALSSAQASLISAEQQAKHWLDSEQRLAQEWQAALNDSAFSSLEDYLQAK 742 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + E+T +EQ + E ++ TL Q + P + VEQ Q + Sbjct: 743 LAEETRLSIEQKVRQFE---QRLATLQGQWEALAKELHNQTPPNLTEFKAAVEQQQAHVT 799 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 Q+L E + +RQ + TL Q Q+ ++ + +G L+ + + G Sbjct: 800 LCLQQLSEVRSRYDSLRQ-------VSDKLVTLYQNNVQLEKEYQIYGTLSDIANGRTGA 852 Query: 894 K--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVEVVDTWQAD 943 K +F G+ LD+++ A+Q+L R+ GRY L+RK A L++ V D + Sbjct: 853 KVSLHRFVLGVLLDDVLIQASQRLQRMSKGRYWLKRKEDRAKGNAGSGLDLMVEDGYTG- 911 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 RD TLSGGESF+ +LALAL LSD+V S R+D+LF+DEGFG+LD E+LD A+ Sbjct: 912 KWRDVATLSGGESFMAALALALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAIQT 971 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 L L G+ IG+ISHV +KE+I +++ + KL Sbjct: 972 LVDLQQGGRCIGIISHVAELKEQIALRLDIVTSTLGSSIKL 1012 >UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1T5_HALOH Length = 1108 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 209/1129 (18%), Positives = 436/1129 (38%), Gaps = 106/1129 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E I+F + GLF I GPTG+GK+++LDAI +ALY + R Sbjct: 1 MRPLLLKISGLNSFVQEEIINFKK--LTEKGLFGIFGPTGSGKSSILDAITIALYGKIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + ++T E EF + + + + + + RV LA Sbjct: 59 D------TKEFINKETGELYVYFEFAMGSNQ-KTYCIDRKLKTSDNNGYTTSRVRLAIKE 111 Query: 121 DGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +GK+ + +KV++ + + GL++ F R+++L QGQF+ FL + K+R ++LE + Sbjct: 112 NGKVEEVYEKVREVEDKVEKIIGLNHEDFMRTVVLPQGQFSEFLTLQGKKRRDMLERILN 171 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E +G ++ + + ++L+ ++ + ++ + ++ + L+ L E Sbjct: 172 LEEFGERLMEKLRLRKNIKESQLKSVETILTSYEDVSEKSLEDILNKLENLKKEIGYKKK 231 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 Q+++ Q++ + Q+ L E+ + A+ A NL+ Sbjct: 232 RLQEKRNEYEKYKEVWTRQKQLLKYQEKLDTLEERSERISNLKNKMEQAKKALNLKKDIN 291 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHH-------AAKQSAELQQQQQSLNT 350 R+ + Q++E + + R K+ +L +++ + Sbjct: 292 RLERYHQERKETNQKVENLEKMIVDLREKRDRYNREYEESLRAKEKELPDLTKKKLEIKD 351 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDR----EHLRQWQQQLTHAEQKLNALAAITLT- 405 ++ +++ + E G + Q D+ E+L++ Q++ +Q++ L I Sbjct: 352 AIKLYEQNKGIKKEVTGKAEKLKQMVQDKNSLEEYLKRGQEKSRVIKQQIKDLEDIIEKQ 411 Query: 406 -LTADEVATALAQHAEQRPLRQ--HLVALHGQIVPQQKR--------------------- 441 + +D T +A +R +Q + + Q + + +R Sbjct: 412 VINSDYRKTIMAGLNLERDYKQVQKDIKVINQGIKRLEREIWSLDEKRKDKSGELKRIES 471 Query: 442 --LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 L Q + I + + + + N ++ +K +QL D++ E + Sbjct: 472 GILYQYEKIIGDKEKAERELNGQKEKLEDDINKKRKQLEDLEKEIEDYKIRNLAGILAGK 531 Query: 500 LQAGQPCPLCGSTSHPAVEAY----------------------QALEPGVNQSRLLALEN 537 L G PCP+CGST HP V S + L Sbjct: 532 LTEGSPCPVCGSTEHPRVAEKIDKAGLQKLLNTRKEIDSKLTELEERLNKYNSGMSILNK 591 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQ----SLRQDEQALTQQWQAVTASLNITLQ 593 E+ +L +E + D + +L+ + LR+ + + T L + Sbjct: 592 ELTRLRQEKEEVILSFDNVLSELEEYDGVLTTGPGELRRKRDRVKNELTKYTTQLETKQK 651 Query: 594 PLDDIQPWLDAQDEHERQLRL-------------LSQRHELQGQIAAHNQQIIQYQQQIE 640 L D + + L+ ++ E + + + Q+ Sbjct: 652 DLADRKDKMKELKSLNSTLKQEYFKLIGELGIDDIADELENINKKDKERENYQKRLTQLR 711 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 Q+ + + + Y ++ + + E + + Q + Q + + + L+ Sbjct: 712 QQYEKINNRIENYRVSFNETEREITIFEHKIQTLKDKYQENRKEIENKVGDRDPLHYLKE 771 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + +E + + + L+Q + + + + Sbjct: 772 VESREEELKKRVDKYKKALEDTTDLLNNKERLMERLKQNRATLIKEISDTEQYLKEKMDE 831 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 F+ L E + E+ E+ +++ ++ +T+ L Sbjct: 832 YKFESFDDVRKYLSWENQIRAWEEEITEFEDLKKEVESNITRLKMELNGQ--------SI 883 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 +I+ + + L G +Q +++ + ++ ++ ++ + Sbjct: 884 SQERWTKIKADRESLEENLSRLQEELGSCKQTIEELKRKLELKRKNQEKKEELEHDLAVI 943 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDT 939 +N LI G F +F L + A+ +L + + RY L+ E + D Sbjct: 944 KDINDLI---RGKSFVEFVAMKQLRYIALEASSRLMEITNNRYKLELDNQG--EFVICDN 998 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTA 997 + RD +TLSGGE+FL SL+LAL+LS + + ++ FLDEGFGTLD LD Sbjct: 999 YNGGVRRDCKTLSGGETFLTSLSLALSLSSHIQLKGNSNMEFFFLDEGFGTLDVNLLDIV 1058 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLESTF 1045 +++L+ L+ T+G+ISHVE +K R+PV++ V+ GL S++ + Sbjct: 1059 MNSLERLHNEHLTVGIISHVEELKNRVPVKLMVEPAEPGLHGSRVRIEY 1107 >UniRef50_C7N5A9 ATPase involved in DNA repair n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5A9_SLAHD Length = 1081 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 221/1108 (19%), Positives = 403/1108 (36%), Gaps = 92/1108 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + E IDFT F +GL+ I G TGAGKT + DAI ALY Sbjct: 1 MKPLHLTMSAFGPYADEVSIDFT--TFGDSGLYLICGDTGAGKTIIFDAIAFALYGTPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 + S E++F +G YR + R + G E A Sbjct: 59 ENRTSSMLRSDFADPDTPTFVELDFSYRGSTYRIRRNPVYQRPKKRGEGFTTENERAEIT 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG +A K + E + G++ +F + ++++QG F L+A + RA + + Sbjct: 119 LPDGSTIAGK-QHVDETVVGILGIERLQFMQIVMIAQGDFRKLLSADTQTRAPIFRRIFA 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASL-------Q 226 TE + E+ + + +++ A + T E +SL L Sbjct: 178 TEPLLGFQKRMAERKNALEADHDRVMASVQNYADMIAVDETDEHARSLKEELSGGVQPET 237 Query: 227 VLTDEEK-----------------QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQA 269 L + E+ +L + + + +L + L Q +QA Sbjct: 238 ALREAERLVEADTSAADAAKQRAAKLQAIRDEAKAALESAQTNNGLIDRRDAALQVSEQA 297 Query: 270 LAEEEKAQPQLAA--------LSLAQPARNLR---PHWERIAEHSAALAHIRQQIEEVNT 318 L + +A+ L A +L R+LR P ++ +A + +E Sbjct: 298 LGAKTQAKAALDADAHLDDEIAALRARERDLRSNLPSYDEYGRLQSAFDEAARVLESARQ 357 Query: 319 RLQSTMALRASIRH--HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEP-AGWRAQFSQQ 375 R A+Q+A+ Q + Q L E + + N+E A + Sbjct: 358 AKTQVETELTQARKRRDEAEQAADEQAKAQHNRDMLAERLKIDRANDERCAAQAKTYDNI 417 Query: 376 TSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQI 435 + + + +QQ+ A+ A+ A +D + A A+ + + L Sbjct: 418 LDADKLIGKLKQQVEEAKSAQAAINAAIEQGVSD-IEQAAAEASGLGAATEDLFDAENDK 476 Query: 436 VPQQKRLAQLQ---VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI-- 490 Q +A+L + ++ Y + + +T + + Sbjct: 477 RAAQADIARLDACSAERTELADASAAAAKDAAAAQEAYLQAQSTFLECQTKLAEARKAYL 536 Query: 491 -KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATL 549 + A L+ G PCP+CGST HPA + P L L+ + Sbjct: 537 DEQAGIIAAGLEPGSPCPVCGSTDHPAPAQARTDIPSSAD--LDELQEHYNETLAVANEA 594 Query: 550 RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHE 609 A+ + Q+ + A+ + I A+ E Sbjct: 595 SQNSGALKSDADGKRARLDAHIQEHGRAEELAALRAAAEKALAEAEARIDRSEQAKARCE 654 Query: 610 RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 +Q + ++ + A Q + ++ + T L DE+ Sbjct: 655 QQAKTAQEKRAVVEAKRADLQNALDDLAALKSQLSAAEATRATLQDGLETTDEKTI---- 710 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 R Q Q+ +Q A + L + E + Q+ + + E + Q A Sbjct: 711 RSQAQQAHEQFLLTQGAFDEAVDLLDRLSELVKQAGSAAQALDDLEAELEQATAAQQEAT 770 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 + AA+ + + + A+ + +F ++ K Sbjct: 771 TASITAKAAAQAAAAKLPFPTKQELEAAIDEAAAQADASF----------ETRQKQKDAF 820 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + Q + + R A V Q++Q+LA+ Q+L+E + I Sbjct: 821 D------QASIAAAEAAARAEELVRQAGDDARRQDVSQLEQDLAEAEQQLQEAQDAANAI 874 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS----KEGDKFRKFAQGLTLD 905 +++ + ++ + +++ A + Q ++ ++ + F + Q + Sbjct: 875 ERRIHTNTSLLKRIEHELKRSADIEAQYKEVAIVSDVANGRMVKASHYAFETYVQSRYFE 934 Query: 906 NLVHLANQQLTRLH-GRYLLQRKASE------ALEVEVVDTWQADAVRDTRTLSGGESFL 958 ++ AN++L L GRY L R+ L+++V D + RD +LSGGE+F Sbjct: 935 QMISAANRRLDTLSDGRYELVRREKGFSNRQVGLDLDVKDHYTG-KTRDASSLSGGEAFK 993 Query: 959 VSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SLALAL LSD V + ++D++F+DEGFG+LD E+L AL L L+ S K IG+IS Sbjct: 994 ASLALALGLSDTVQAHAGGIQLDTMFIDEGFGSLDDESLRLALKVLTELSGSDKHIGIIS 1053 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLES 1043 H+ +K+ I +I V++ +E+ Sbjct: 1054 HISELKDNIDRKIVVERGRDGSSIHVET 1081 >UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNM3_CLOPH Length = 1038 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 211/1075 (19%), Positives = 418/1075 (38%), Gaps = 72/1075 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + KGE + F E +GLF I+G TGAGKTT+ DAI AL+ Sbjct: 1 MKPLELAISGFGPFKGEVNVPF--EKIGESGLFLISGDTGAGKTTIFDAIAFALFGCASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ--NRARNQPDGNLQVPRVELAR 118 + + S + ++ F KG Y + RA+ + DG + Sbjct: 59 ENRTTDSMRSDYATGDDKTYVKLVFSHKGRRYEVERNPLYQRAKKRGDGFTEEKPNATLI 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG ++A + + +DY +F + +++QG+F L A +ER + ++ Sbjct: 119 KWDGSVVAGY-QPVTNEIMEILSIDYKQFKQIAMIAQGEFMKLLTASSEERGVIFRKVFQ 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQ----AQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 T Y + + R E ++L+ SG+ L +V + Sbjct: 178 TGNYEAMQKKLKSMASELRGECDQLERSMVQYLSGILLSKENEVLEEWKRKPDIHKINDL 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA-RNLR 293 L + ++ + + +E S + L + E+ + + L + +LR Sbjct: 238 LELLELDLEEDKSRYDTLEVENKELSGKLVELTTKITLVEEQEKKKQELEQRRLLLEDLR 297 Query: 294 PHWERIAEHSAALAHIRQ---QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 E+I + L + ++ Q++ V + ++ +Q + Sbjct: 298 KQSEQIKLNQIDLQNAKKALYQVKPVADAYHKSRVETENLVREIIEQKKRFDIVSEETKK 357 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 E+ + +Q + +Q + L AI E Sbjct: 358 KQAEYHEHEKDKARLEELAIAINQCKEELAQFENLKQLEIKIQSNLKNQDAIVSNEKKIE 417 Query: 411 VATALAQ--HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE--- 465 L + H+E Q +++ +I+ + L+ I + + N E Sbjct: 418 EQGKLLKGDHSELTKELQGYLSIDQEILECIQIGKDLKSKITKLKSLLDELNRIELESSN 477 Query: 466 ---MRQRYKEKT---QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 ++Q Y +K Q E + L+ +PCP+CGST HP Sbjct: 478 LKVLQQEYFKKENSYQTANKEYQTLELAYFREQAGLLAMNLKGEEPCPVCGSTKHPKKAE 537 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 P L KL E L Q +++ Q + +L + L + Sbjct: 538 CSKEAPTEAM-----LNQAKVKLESETVVLNQQSLSVSNQNTKISLMWDNLCVVCEELFE 592 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 + I + +++ +A + + R+L + E + +I ++ Sbjct: 593 E---SFGKDKIKDRITEELSRSEEAFLQKNEEYRVLKKNQERRDWCNKRTTEISAALEEN 649 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 Q Q L A L Q + + R++ A ++ +N+ TAL QL LE Sbjct: 650 VQNIQNLNQEKIAIATVLGQMEGSREQILERRKYATK-EECENKHTALLLESNQLRSNLE 708 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L + + ++ Q AL + + + ++ +L++ + + L Sbjct: 709 RLEK--------------EFHELRSQWSALKAVIEDNEIKEAKQKVTLEEEEKAYQRKLT 754 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 + FD ++++LA L E + Q +++ ++ E Q + ++ + + + Sbjct: 755 ETSFDSEESYLACLWTEDKIEQTQKMIEDYEKQVSEQHLMIEKLVNEIKE---------- 804 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 +V ++ ++ + + + + E+ ++++ + + + ++ ++ ++ Sbjct: 805 TDSVDIQILKDSRDEINAQKSVCERQKEEVNRRIRNNDQIYKDAKKQLEAKGEIQRKYLS 864 Query: 880 WGYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR------KA 928 L+ K F ++ Q D ++ AN++L ++ +Y L R ++ Sbjct: 865 INELSKTANGELTGKVKIAFEQYVQAFYFDTVIEEANKRLRKMTFSQYTLHRADSVNLRS 924 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEG 985 LE+ V+D + R ++LSGGESF +LALAL LSD++ + +DS+F+DEG Sbjct: 925 QGGLEIFVLDHYTGKQ-RTVKSLSGGESFKAALALALGLSDVIQSYAGGIELDSMFIDEG 983 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FG+LDSE+L+ A++ L +L + + +G+ISHV +KERI +I + K Y K Sbjct: 984 FGSLDSESLEQAIETLISLTSGNRLVGIISHVTELKERIDKKILIHKTMEGSYIK 1038 >UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW67_9BACI Length = 1121 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 230/1134 (20%), Positives = 456/1134 (40%), Gaps = 111/1134 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L LK ++S K IDF E GLF I GPTGAGK+T+LDAI LALY + R Sbjct: 1 MKPIELSLKGIHSFKETQTIDF--EELTEAGLFGIFGPTGAGKSTILDAITLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA-RNQPDGNLQVPRVELARC 119 + ++ + E F + ++ + R+ + Q +G+++ L + Sbjct: 59 APVNKEG---IINHASDEMYTAFIFTLGTGNHQTSYKAERSFKLQKNGSVKQTVSRLIKG 115 Query: 120 ADGKI-LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + + LADK D + L GL+ FTR+++L QG+F+ FL K ER ++L+ L Sbjct: 116 VNSPVTLADKASDMDKSVIKLLGLELDDFTRAVVLPQGKFSEFLTLKGTERRKMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG +++A + + +L ++++ +G+ + + + L E+ Sbjct: 176 LEKYGDRLNAKLKHKLDDTAHQLAVIKSEQAGLGDASKTMISDQKKEFENLKKEQIMKKE 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + L + R DEL + Q L Q + + + A L+ A+ A N + Sbjct: 236 QFSKNSDELKKVERWDELSIKLKAVQSELYQFEQDAAEMAHEEARLNQAETALNGQERAR 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 I + + ++Q I+ + + ++Q ++ L E D+ Sbjct: 296 TILDLHRDIEALQQDIQTQLKQKDVVHNEYIEAKKTKDSSDKQMQSEKPILEKQYDEADQ 355 Query: 358 F-------RQWNNEPAGWRAQFSQQTSDREHLRQW----QQQLTHAEQKLNALAAITLTL 406 ++ ++ + + + E L Q L E+++ L T Sbjct: 356 AIRLIGDRKELTDKHTKLQNEEKELQFSIEQLNNTLRHHQHDLARYEKEVQKLKKDLETY 415 Query: 407 TADEVATALAQHAE-----QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 T E L E ++ L ++ L+ ++ ++ + + + + +E+ Sbjct: 416 TISEEDKRLVNQTEHIISQKKDLNNRIITLNKNLLDITEKQKETKKQTEQIEKEKELCQN 475 Query: 462 ALNE--------------MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 L++ ++ + + D + ++ + L R +L +PCP Sbjct: 476 KLHDQYGKLQFWYDAFSSYKRTLESAKLIITDNRNRRQKHHQESLLAEIRDRLNPDEPCP 535 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 LCGS H + L EV +L +E T R +L++ + + Sbjct: 536 LCGSVHHEVNHLEAFENADEHIPSLDTFVGEVDRLTDEVNTHRIKLESTAENIPLSPENT 595 Query: 568 QSLRQD------------EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL 615 D E+ L + Q + AS + D+ L H+ QL Sbjct: 596 SIESGDEVKVPDLYANDFEEGLRRLKQTMHASAQTIGKLYSDVHETLSQLRHHQDQLMTS 655 Query: 616 SQR-----HELQGQIAAHNQQIIQYQ----------------------QQIEQRQQLLLT 648 +R + + I H++ + + Q ++++++L Sbjct: 656 KERLSGIEEQKKQLIMEHSRTDGEMKETEIEWRKHTASIPFKQAEAVVQSLKEKKELYHR 715 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQ----QRQNELTALQNRIQQLTPILETLPQS 704 L P +++ + + +E Q + +L +I+ + +++L Sbjct: 716 ILGRLENARPAIEKKNALINQSNEELYKLQVKKTAAETKLAFQLEQIETIDKSVQSLTDG 775 Query: 705 DELPHCEETVVL-------------ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 ++ ++ V ++ +Q + + ++ L+ L + + Sbjct: 776 EQPEDIKKRVSEKILYLKERFEKADQDVQQKEKDLQRISNELIRLESNLESKNSFLNEQE 835 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 F L + F D + L + + LE+ K+ L N+R++A ++ T+ Sbjct: 836 QSFHNWLDETSFKDAKDVLEHTVPKAE---LEKQKERL-NERKEAYKNSQESYRTIK--- 888 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 + D+ E+I+QE + +++ + G +Q+++ ++ L ++ Sbjct: 889 -NEMDNLQLTEAAREEIRQESRRLEKEMEDLYDRVGRKKQEIESLVKRAERYDVLEKERM 947 Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE 930 + +ED L + G +F +F L + LA+++L L G++ ++ + Sbjct: 948 TVVSLLEDLEKLQIVF---RGKQFVEFIAEEQLIQVSRLASERLYELTKGKFAIEIDSDG 1004 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGT 988 + D R +LSGGE+F+ SLALALALS + K + ++ FLDEGFGT Sbjct: 1005 G--FVIRDDANGGIRRPVSSLSGGETFITSLALALALSMTIQLKGQHPLEFFFLDEGFGT 1062 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK-KINGLGYSKL 1041 LD L+T + AL+ L S ++G+ISHV+ ++ERIP ++ V + G SK+ Sbjct: 1063 LDEHLLETVIGALERLQTSDLSVGIISHVKELRERIPRKLLVTSSVPGGAGSKV 1116 >UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7V414_BACUN Length = 1140 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 245/1133 (21%), Positives = 449/1133 (39%), Gaps = 104/1133 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L +KNL S++ IDF P + LF I G TGAGKTT+LDAICLALY+ETPR Sbjct: 1 MKLQKLTIKNLASIEDA-VIDFENGPLSEESLFLICGETGAGKTTILDAICLALYNETPR 59 Query: 61 LSNVSQSQ--------------------NDLMTRDTAECLAEVEFEVKGEA-YRAFWSQN 99 + + + LM R+T+E E+EF E Y A W Sbjct: 60 MDHAENEKYKDLSQTFSAKKEDVAINDSRQLMRRNTSEAWTELEFTGSNETPYTARWYVA 119 Query: 100 RARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 RA + G +Q R L G L +K + GL + +F R+ +L+QG F Sbjct: 120 RAHRKISGAVQDVRWTLENKKSGAQL-NKKNEIKAEIQAAVGLTFEQFCRTTMLAQGDFT 178 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 FL +K E++++LE+LTGT IY +I A ++ K RTE E + G+ +L E+V Sbjct: 179 KFLQSKESEKSDILEKLTGTSIYSEIGAEIYAATKERRTEYENQNRKLEGIHILAEEEVS 238 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ ++ K+ + +WL + EL ++++ + A+ + + + Sbjct: 239 TIKEAIATQNAGVKEANEQKTTALAKRDWLKKYSELLLTREQQKKMWEGKQAQLQSDEFK 298 Query: 280 LAALSLAQ--------------------------PARNLRPHWERIAEHSAALAHIRQQI 313 L + + A LR + R+ S L ++ Sbjct: 299 QKELLIKEWNATADARNWLSTLKQQQQQQQQNYAQAGILRASFARLDGGSKWLCGFLKEQ 358 Query: 314 EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFS 373 E+ R + + + + + + + + +L+ + A + Sbjct: 359 EDKLHRAEKYLQEHSPLLPMFEQSQSIITGLKSALDAQTRIGTYNAHLERLAAQQPVKVK 418 Query: 374 QQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG 433 ++T L + +Q+ + ++N T+ + + R ++ Sbjct: 419 ERTDKEAALTRKEQENHTLQNEINLRNKQLETMDRPALQDKKNKLDAGRENLLQALSALS 478 Query: 434 QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTIC--EQEARIK 491 + ++ L + + + + + ++ + K D++T+ ++EA + Sbjct: 479 LLAETERTLNEAKENEKALNAKVEACQKQYVLLQTAFDSKKTSYDDIRTLYDKQKEAVEE 538 Query: 492 TLEAQRAQLQAGQPCPLCGSTSHPAVE---------------AYQALEPGVNQSRLLALE 536 + R++L G CP+CG + + E + L Sbjct: 539 WAKETRSRLVVGDTCPVCGQEIKSLCKDEDFQSVLAPIRTSLETKEKEYKETEQALNNNR 598 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQS-----------------LRQDEQALTQ 579 E G R + +AQ+ L++ + Sbjct: 599 TESNTYGTLAENARQSTARALRSYNLAHTDAQAKCAQCNGVGLSTTTGETLKKLLEENKL 658 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR--------HELQGQIAAHNQQ 631 + + L + I +DE ++ + Q +EL+ I + Sbjct: 659 EADKLNEKLTEVQKLSAQIIALQRQKDECQKHVDAARQAFNSADRVLNELKNSIVNYESL 718 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 ++ I + + E+ S++ Q ++++ Q + L++ I Sbjct: 719 TANEKENIRATMDRVTPHILWEGWNTEWENSPLSFIDRLTQATRNYRLAQEKQRELKSAI 778 Query: 692 QQLTPILETLPQSDELPHCE--------ETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 + LE + + E + + L++Q L+Q Sbjct: 779 ALIHKELEGININKESIDAAFPDWRNAPAATQEMEIKDLGIAWNNLNTQASGLKQSISST 838 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAF-LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 A+ + + Q A+ D++ + + + L Q L+ + A T Sbjct: 839 AEQMARLQKDLTGFYAANPTLDEERITVLSAWSGSRIEALRASLQTLKEEEVAASTAFHL 898 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 + +H +P+ + +E + +A +K+ S G+ + +L+++ N + Sbjct: 899 ATGQVEEHISRKPE--IEENENLETLDALIANLEEKITVGNQSIGQQKLRLEENTRNIDR 956 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 + ++ ++ ++ W L G + G FR AQ L L+ AN L RL RY Sbjct: 957 IKEEKERADRLREEYLKWDRLCRHFGDERGKNFRNIAQSFVLKELLAGANFYLQRLTDRY 1016 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 L+ +A +L + + D Q A R TLSGGESFLVSL+LAL LS L +D+LF+ Sbjct: 1017 ELECQAG-SLTILLRDFHQGGAARPACTLSGGESFLVSLSLALGLSSLSRQSLSVDTLFI 1075 Query: 983 DEGFGTLDSETLDTALDALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKIN 1034 DEGFGTL S+ L+T +D L+ L+ GK +G+ISHVE +KERI QI+V++I+ Sbjct: 1076 DEGFGTLSSDYLNTVMDTLEKLHQMGGKKVGIISHVEGLKERIKTQIQVRRID 1128 >UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYS9_9CLOT Length = 1053 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 209/1087 (19%), Positives = 420/1087 (38%), Gaps = 85/1087 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + S G ++DFTR +G+F ITG TGAGKTT+ DA+ ALY +T Sbjct: 1 MRPIKLVMSAFGSYAGRTELDFTR---VQSGIFLITGDTGAGKTTIFDAVTYALYDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR----ARNQPDGN----LQVP 112 + E E F + + Y + R + DG+ + P Sbjct: 58 GRRDGSMMRSQYASEDVETYVEYTFSYRRDVYTVRRNPEYIRLGKRRRADGSPRFVKEAP 117 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 +VEL DGK+ K ++ + A + GLD +FT+ +++QG F L+A+ +ER ++ Sbjct: 118 KVELT-LPDGKVFQGKKREIDQKIADIIGLDADQFTQIAMIAQGDFLKLLHAQSRERKKI 176 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEK----LQAQASGVTLLTPEQVQSLTASLQVL 228 + T Y ++ + Q S ELE ++ + ++ ++L+ L Sbjct: 177 FSRIFHTRFYYRVQEELKRQSTSLYIELEDNVKSVRREIGRAECEADSAYETEWSALKGL 236 Query: 229 --TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 D E+ L ++ R+ R L A+ E E A A Sbjct: 237 PIPDREETLRLLGLIIKEGGEKEKRRRAEADRLQGRLDELHGAMKEGETVNRLFQAYEEA 296 Query: 287 -QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + LR E E A +A R ++E V + +RA+ ++++ Sbjct: 297 CETGMRLRERKEAFREKEAGIACAR-RVERVRAKEAEFETIRAAAEESGQSLLRLERKEK 355 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 +S + + + E + ++++ + L E++ + L+A+ Sbjct: 356 ESAAAAREAYAQEEAAREELSRKEPEYTETLVRLGDALRQYDALKEQEEERDRLSALLCK 415 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV-------------AIQNV 452 + DE A A+ + L ++ Q +L A++ Sbjct: 416 MR-DECEKAAAEADRLEVYVRGLRKEQEELAGSQAERDRLSAKAGILTDRASALEALEQS 474 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPLC 509 Q A E +Q E + + + EQ+ R + L+ G+PCP+C Sbjct: 475 AQHIRAFETACREKQQNEAECSAAYVEASAVYEQKYRAFLDEQAGVLAGVLEEGKPCPVC 534 Query: 510 GSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 GS HPA P Q + A + + + L +L+ + + Sbjct: 535 GSCGHPAPAHLSDDAPS--QEEVEAAKERRNQAELVRESAAQALGEAAGRLRTEREVFER 592 Query: 570 LRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 + A I + + D + R + + + +Q + Sbjct: 593 ECRKILGPGAGADPAEAEAEIRREAGACRREAEDTKQALCRAQKNVKRYAAVQEEYEKQE 652 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 +++ +++ +Q L Y+ +E+++ L R ++ ++R+NE+ L Sbjct: 653 RELSLKNNALKESRQKLQELEREYSRQNALAEEKKNKLEYRSKD--EAEKRRNEVYGLLE 710 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 +++ E + + + ++ +++ +K Sbjct: 711 ELRE-----------------RCAKARERYERALQDQRRTEGERSGEEKRGRQLDVQRRK 753 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 A+ F AL F + + A ++ ++E + +Q R + + + Sbjct: 754 AEEGFREALAQEAFASAKEYEAKKPLLESAKEMESALEQYLSQVRDNEAALKLLGSQIEG 813 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 ++ VE ++ E + +K+R+ Q + ++ + R++ + ++ Sbjct: 814 KER----------ADVEALKLEAEELSRKIRDIRGGQIRLGGMNSKNREIREELRKEFEK 863 Query: 870 IAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLL 924 + +Q E G L+ F + Q ++ AN++L ++ ++L Sbjct: 864 KGGLQRQYELVGNLSRTANGNLSGAVKLDFETYVQRQYFKQIIQAANKRLIQMTNNEFIL 923 Query: 925 QRK--------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SH 973 Q + L+++V+ + VRD +TLSGGESF+ SL++AL L+D+V + Sbjct: 924 QCRDVKSLGSQGQAGLDLDVL-HLLSGTVRDVKTLSGGESFMASLSMALGLADIVQNTAG 982 Query: 974 KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI 1033 +D++F+DEGFG+LD + + A+ L+ L + +G+ISHV +KE+I ++ V K Sbjct: 983 AVHLDTMFVDEGFGSLDDGSREQAIKVLNELAGDSRLVGIISHVNELKEQIDNKLIVTKT 1042 Query: 1034 NGLGYSK 1040 + Sbjct: 1043 EKGSSVR 1049 >UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB8_HELMI Length = 1023 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 229/1083 (21%), Positives = 404/1083 (37%), Gaps = 101/1083 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L ++ G IDF LF I GPTGAGKTT+LDAI ALY +T Sbjct: 1 MKPLKLTMQAFGPFAGVQVIDFNE--LGGQSLFLIHGPTGAGKTTILDAITFALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA--- 117 + E +F + GE YR + R + G A Sbjct: 59 GEREGRQMRSHHASPKVETEVIFDFALGGEVYRIARKPEQERPRQRGEGMTTIAAAATLW 118 Query: 118 ---------RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 +G +LA + K E L GL +F + ++L QGQF L A KE Sbjct: 119 RRTGLPLDAESPEGAVLAHQPKRVNEEVLRLLGLRSAQFRQVVILPQGQFRQLLMAGSKE 178 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKL-QAQASGVTLLTPEQVQSLTASLQV 227 R E+LE+L TE+Y I ++ K E+ L Q QA + E+V L L Sbjct: 179 REEILEKLFRTELYRLIEEAFKDRAKKLEEEVAALRQEQAFILVEAGLEKVDDLAERLDD 238 Query: 228 LTDEEKQ-------LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 E + + Q +++L R E + +R + L Q L E++ + Sbjct: 239 HRRERDEKAQIVEAATASVQAAREALEQGRRDKEKLERWARLEAELDQLLKEQDGVMEKE 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA- 339 A L AQ A L RQ + + ++ + Sbjct: 299 ARLLRAQKAAGLADAESVRNSRRQEAERERQACARHEAEYGKALLRQKQAEERLVEEQSR 358 Query: 340 -----ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 E Q++ L ++ W+ Q ++ L Q +L ++ Sbjct: 359 QKVRDEAQKRLTVLEELAEKVATLAPLRRACEEWQRQVAEAQKKESRL---QMELAELQK 415 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 + + LA TL + + A ++ +R ++ ++R +++ + Sbjct: 416 QTDRLAKRRQTLLVEVGKAEFLETAAKQAIRA--SEKRAELEAARQRFRKVEADYKRTES 473 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 ++ L E R+R+ E T C ++ + L L+ G+ CP+CGST+H Sbjct: 474 KRQACEENLAEARRRFDEMTD--------CWRKGQAAILA---GALKTGEACPVCGSTAH 522 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 P A P + L E V+ +E L+ L + Q ++L+ + Sbjct: 523 PRPATGGASVP--TEGDLKTAEALVRHRQKELEELQKTLADLAAQKAEVSTFGKALQAEL 580 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 A A+ +Q L ++ A+ E + L + + + ++ Sbjct: 581 GEKAALSAADLAAEAKRMQAL--VEGARSAEQELATTMGELESLEKRKQAVTESLEKATV 638 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQ-SWQQRQNELTALQNRIQQ 693 + + + L +P E L +A+ +WQ Q A Q Q Sbjct: 639 ELRDCQLNAREAAAVLEEREKAIPPEVRRPDDLQRAIDDARFAWQALQKSWDAAQREAQL 698 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + E + A +A Sbjct: 699 SAQQAAAAQAAYEAAR----------------------------RSSEDADGRFAAEEAA 730 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 F L + F D + + + + + LE ++ + T A+ + Sbjct: 731 FVIRLTEAGFQDIAEYERSKLTGEAIRSLE----------KEIREYGRSVERTRARRDEA 780 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + ++ L + + + ++ Q+ Q+ ++ + L + Sbjct: 781 EAAARGIVAPDLDAFTAALETAESRRDDALKKEATLKDQIAQEERWLERYRQLEKYSKAR 840 Query: 874 TQQVEDWGYLNSLIGS--KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS- 929 + G+L + EG F++F L +++ AN++L + GRYLL+R + Sbjct: 841 EGRYRVLGHLARVANGRNAEGVTFQRFVLAAFLSDVLLAANERLKVMSRGRYLLERTSDR 900 Query: 930 ------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSL 980 L++ V D + + R TLSGGESFL +L+LAL L+D+V + ++++ Sbjct: 901 ARANAAGGLDMVVFDHYTGQS-RPVATLSGGESFLAALSLALGLADVVQSYAGGIHLETI 959 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 F+DEGFG+LD E+LD A+ AL L G+ +G+ISHV ++ER+ +++++K + +K Sbjct: 960 FVDEGFGSLDPESLDLAVKALVDLQQEGRLVGIISHVAELRERVDARLELEKNDKGSSAK 1019 Query: 1041 LES 1043 + Sbjct: 1020 FKV 1022 >UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteobacteria RepID=Q07GQ2_ROSDO Length = 1019 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 207/1074 (19%), Positives = 369/1074 (34%), Gaps = 83/1074 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + G ++FT G+F I G TGAGKTT+ D I AL+ ++ Sbjct: 1 MRPIRLTMTAFGPYAGTEVVEFTAAL--DAGIFGIYGETGAGKTTIFDGISFALFGQSSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW--SQNRARNQPDGNLQVPRVELAR 118 ++ T E+ F++ E Y Q RA + G P Sbjct: 59 AERSAEDMVCHHAHATDITKVELVFDLGDERYVVQRVPKQQRAALRGSGTTTEPHQAYLF 118 Query: 119 CADGKILAD-------------KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 + G LA+ +V L G + +F + +LL QG F L A Sbjct: 119 RSTGMPLAEIAGDNLGDIVAEKQVNRVDPEIEALLGYNAAQFRQIVLLPQGDFRKILTAP 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 ER+ +L+ L ++Y + + + ++ + T L + L + Sbjct: 179 SDERSPILKRLFDVQLYERFADRIKRDAADIYRQIND--ERVRRDTHLGDLSEEQLADEI 236 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 + + +E L T + E ++L + + + + +A A E+ + A+ Sbjct: 237 RSMGEEVSALETTVKAETETLVQCQKALSAGEGLAEKFEARGAAETEKATLESASEAVEE 296 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + + + +A+ ++ TR + +S + + L + + Sbjct: 297 TKSRLAKARAAQTVLVAESAMRAAGEEAGAAQTRHATAKVSLSSAQSALSVAQEALNRTE 356 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 Q + H R + + + + + AEQ Sbjct: 357 QQKDNRDAAHARVLELQRFEQTLGQSHTLLADLEAA--RSKTKAAVAEQATAERNRTNAE 414 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 + + +H Q + + + + + L + + A + + + E Sbjct: 415 QSLTTLRNLQKEHPAHVRALQEVGNVLAAVEHEAEALGRFETAKSRRDLQAGEVDRLQTE 474 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 +R ++ + I+ L R +L G+PCP CGS HP Sbjct: 475 YERRSTHLEVCKNALERAEQDLTEIQALHVAR-KLLPGEPCPACGSLDHPNPATGDPERR 533 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 G + A +E A + RQ E + + Sbjct: 534 GRHDQFEQASREFRSAERDEIEAKTALAAARASLTE---------RQTELDALDRPERDR 584 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 S + L D + L+A ++ G+ +H++ + +Q + + + Sbjct: 585 KSFDPVLAEARDRRIALEADARFVDLESKIAMAETAAGETTSHHE---RARQDVSEARDA 641 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 T Y L E + + EL A + Sbjct: 642 ETRAQTSYDTLLRDVPENWRQGGALASALSAAVSARGELVAAHETATNGEKAAAVALSAA 701 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E + + AQ+ KAQA+F L + D Sbjct: 702 EQGVT------------------------SAVAEVDRTAQAFTKAQAEFTERLGTAGL-D 736 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + F A D LE+ + + Q A + P D ALT Sbjct: 737 EAGFKVAKADVAQSDALEEQINSFNE---RVAANKAQLARLANEISNRSPPDVEALTAAK 793 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 E Q +L + Q +++ L+ + +++ L +IA + + G L Sbjct: 794 ESAQTKLETSQQT-------HIRLQRDLEAKFETQRKVAALSIRIAALEAEYGPVGGLAD 846 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVE 935 L+ K FA D ++ ANQ+L + GRY L R + L++ Sbjct: 847 LVNGNNERKVRLPDFAIAAMFDEVLVAANQRLGPMTGGRYQLLRPEDAVGGRQKRGLDIA 906 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + R T+TLSGGE F SLALAL LSD+V S ++D++F+DEGFGTLD + Sbjct: 907 VFDA-NTEKSRPTKTLSGGEGFQASLALALGLSDVVQQNSGGIKLDAIFIDEGFGTLDED 965 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 TL+TAL+ L L +++G+ISH E +K I ++ + + A Sbjct: 966 TLNTALETLYELTNDKRSVGLISHTEQVKSMITDGFDIEVTPSGSHIHTRRSAA 1019 >UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CK38_9BACI Length = 1044 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 187/1071 (17%), Positives = 426/1071 (39%), Gaps = 83/1071 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ IDF + +F I+G TGAGKTT+ D I A+Y + Sbjct: 1 MRPLKLTMQAFGPYPSAETIDF--QLLGHRTMFVISGKTGAGKTTIFDGISFAIYGKASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG------NLQVPRV 114 D + F ++G+ Y S + + + G N + Sbjct: 59 EDRHGNDLRSQFANDDDVTEVSLTFSLRGKIYLIIRSPQQEKKKARGEGFTTVNAKAELY 118 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + ++LA V+D E + LD +F + +++ QG+F L + K++ +L+ Sbjct: 119 AINENGEKQLLAANVRDVDEKIKEIIQLDANQFRQILMIPQGEFRKLLTSDSKDKEGILQ 178 Query: 175 ELTGTEIYGQISAMVFEQ----HKSARTELEKLQAQASGVTLLTPEQ------------- 217 L TE Y I + E+ + +E + G+ E+ Sbjct: 179 RLFHTEFYKIIQDKLKEESDLLKRDVEKAIEDRTRRLLGIHPEQNEELRELLLKEPLNDH 238 Query: 218 --VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 ++ L ++++ + QL +++ + + L Q Q+ + + + E+ Sbjct: 239 MILEKLQLHIEMMEENLSQLNHTYEEKHKERDQLQAQLVQAQKLVEQFEKRRALREEKRS 298 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 + + + + +++ + + ++++ V L+ +A + A Sbjct: 299 LEKRQEEIDKLKIQIKKAYQADKLVQQDEYCRRLSRELKTVERELEKLLAE----QQELA 354 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 + ++ ++ + + + + N G + + ++ + + + Sbjct: 355 DKMSKARKNWEEEQQKEEARNEAAKKVNTLEGLKEDVYSLGQLEDEVKDLDIKRNQLKNE 414 Query: 396 LNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 ++ ++ L + + LR L ++ Q +L +Q + +E Sbjct: 415 ISR-KSVELNSKKVLLNEQERKKVNLEELRLKSFELEKEVTQLQSE-EKLFTQLQKLQKE 472 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTI---CEQEARIKTLEAQRAQLQAGQPCPLCGST 512 + L +++Y +Q++ D ++ E ++L PCP+CGS Sbjct: 473 TVEVERILANRKEQYHSASQEVEDARSTLIWLEDRWNKAQAGILASKLVDKDPCPVCGSE 532 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP + Q P E ++K E +A ++ E + ++ Sbjct: 533 HHPNLAHLQDDLPD---------EKDIKAAKEMVMVKEKHENATSRAFYEIEAKYNAVHT 583 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 +Q ++ V L+ + ++++ + Q EL + Sbjct: 584 QKQEALEEIIQVREVFKEEEVDLELTSIRNNLENKNIQLKGFSLQLKELNSIVERIEAAK 643 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 +Q E+ ++L L ++ ++ + + R + R+ AL+ Sbjct: 644 TGITEQEERLEKLKGDEL---GVSEAFHAKKGALDSRRTAIPLEIRTREKFNAALKTAQD 700 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 +L + + ++ EL + ++ ++ Q + QQ +++ + Sbjct: 701 KLNTLKASYEKAQEL-----------YNRLLKEVSVNEVQVKDKQQSASRLQAEMEEERN 749 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 +F L+ F++ +AF A E ++ +E+ + + R + + + L ++ Sbjct: 750 KFLQILEEQGFENYKAFQEARRAESEISLMEKKVTSYGEEVRSVHDRLEELEKALQDTEE 809 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + +E++Q + +++L++ ++ ++ ++ + L +Q+ Sbjct: 810 PQ----------LEKLQLIFTEINEELKKLNEEYNSLKMKISENQSIHEYVCNLNKQMKD 859 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS 929 + ++ G+L+ + + + F ++ L++++ +AN +L ++ GRY L RK Sbjct: 860 LEERYSIAGHLSEMARGQNAHRLTFERYVLASFLEDILLVANDRLMKMTSGRYRLIRKRD 919 Query: 930 -------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 LE+ V D + R +TLSGGESF +L+LAL L+D+V + + + Sbjct: 920 RSKGNVQSGLELLVFDQYTGQE-RHVKTLSGGESFKAALSLALGLADVVQQYAGGVSLAT 978 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 +F+DEGFGTLD E+LD A++AL + +SG+ +G+ISHV +KERI +++V Sbjct: 979 MFIDEGFGTLDPESLDHAIEALMDIQSSGRLVGLISHVPELKERIDARLEV 1029 >UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8RJV9_9CLOT Length = 991 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 197/1054 (18%), Positives = 373/1054 (35%), Gaps = 90/1054 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L + GE +D GL+ ITG TGAGKTTL DAI ALY Sbjct: 6 MRPTELIISAFGPYAGEVTLDMAS--LGDRGLYLITGDTGAGKTTLFDAIAFALYGNASG 63 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S + R A E+ F G+ YR + R + G + A+ Sbjct: 64 DSRKPRMLRSKYARPDARTYVEMGFSYSGKEYRVRRNPEYMRTKQRGEGETREKPDAQLH 123 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG+++ K L GL+ +F++ +L+QG F+ L+ + ++R + E+ Sbjct: 124 MPDGRLVTGD-KAVTVEVEGLLGLNREQFSQIAMLAQGSFSRLLSGRTEDRGIIFREIFK 182 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T+ Y + ++ K + +IT Sbjct: 183 TKPYQLFQEKLKDRAKGLYGRYADSRKSMEQYAG---------------------GVITE 221 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 E+ L W + L A +++ + + AL + A L + Sbjct: 222 GHSEELKLRWKEVPQGSLEALLEVLDQLIGADEAQQQGRDRAMALVRDEMA-ALGMELGK 280 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + +A + + + + + +Q+ + L + + Sbjct: 281 MQGDAAVCRDMAAAADVLRENMPVLEQAKVRYEREKERQA-----DRDGLIGAVTRMEEN 335 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 + + G + + E L + +Q E++ + + + A ++ Sbjct: 336 LKTYDRFDGLQENLKACRKETESLEKRLEQAALEERQWKERNDSDEKIL-ESLRQAGEEY 394 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 + L G+I + L Q + + + + AA E R+ Sbjct: 395 QAALTAGERLREYSGRIGLLAEELGQYGQERKKLEAARERYRAAGEESRRA--------D 446 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 D Q ++L GQPCP+CGS +HPA Y + ++ L+ Sbjct: 447 DAYREMYQRFLDNQAGILASRLTEGQPCPVCGSVTHPAPARYLEEGKEAAKDKVDRLKAA 506 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 ++ + A L + + L + Q + + ++ + Sbjct: 507 AEEKDKAAARLSLEAGRLAGSLDTRYERMK------QQIDAEVATWKEDWQQRIRQAEAD 560 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 L A+ RQ R R+ L+ Q Q ++Q +++ + Sbjct: 561 AGALVAKTGDVRQGR----RYFLEQWELMMGQLKGQLERQAAAQKEKIQEKKKRKEYKEA 616 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 E + + ++ QQ Q L Q + ++L L+ + S LP+ Sbjct: 617 IEGRRVLGRQSLEAASELKQQAQKMLAESQAKERELESRLKEMESS--LPYENRKAAQAE 674 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 + L + ++ ++ + AQA+ + D + + D Sbjct: 675 LAEKKAFLAGLEKAFKEAEESYNRISRRVSDAQARLEALRGRMAEKDAEGRESVGEDRDP 734 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 + + + + R + L + E + + R ++ Sbjct: 735 VNGPDTMLPGGMDVRTVMERLEARMQENRLRQSEAR----------------------ER 772 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS----LIGSKEGDK 894 L + + +L+ + R++ + ++ ++ L+ +G KE Sbjct: 773 LTGLEQEKSRLHHRLETNRMARERISEQKASMEEIQKEWTWVKALSDTAAGEVGGKEKIT 832 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------KASEALEVEVVDTWQADAVRD 947 +AQ + ++ AN + + G +Y L+R + L + V+D + R Sbjct: 833 LETYAQMAYFERIIARANTRFMVMSGGQYELKRCTEEDNRGKNGLGLNVIDHYNG-TERS 891 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +TLSGGESF SL+LAL LSD + + R+D+LF+DEGFG+LD +TL+ A+ +L L Sbjct: 892 VKTLSGGESFQASLSLALGLSDEIQSAAGGIRLDTLFVDEGFGSLDEDTLNLAMKSLGDL 951 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 + +G+ISHV +KERI QI V K G Sbjct: 952 AEGRRLVGIISHVGELKERIQHQIVVVKDKTGGS 985 >UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema pallidum RepID=SBCC_TREPA Length = 1047 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 224/1073 (20%), Positives = 399/1073 (37%), Gaps = 68/1073 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L L N+ G +DFT +F + G TG+GKTTL DAI ALY + Sbjct: 1 MKPMRLTLHNIGPFVGTHTVDFTAL----GPIFLVCGKTGSGKTTLFDAIAYALYGKPLG 56 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 V +S + A +EF + + YR + + + Sbjct: 57 TRAEVIRSLRSHYAAPSEAAFATLEFSLGTKIYRVHRTLTCTLSHRKTEQPEQLYLEQKK 116 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 G +I + + L L+ F R ++L QG+ A FL A KE+ E L L Sbjct: 117 GHGWERIACAHKSETECVIHDLLKLNSKEFERVVMLPQGECAQFLKANSKEKKETLMNLF 176 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVT-----LLTPEQVQSLTASLQVLTDEE 232 + Y + ++ A+ LE L++Q + E+ Q+L A LQ D Sbjct: 177 PVDQYTALMERAKKKSLHAKAVLETLRSQLETLCAECMPDTYHERKQTLEAELQHARDAL 236 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 +Q + Q L Q + QQ + ++ A+E + A+ A L Sbjct: 237 QQTRISHAYYTQKREALEAQLKKQQLCKELRARIETYRAQEPVHAETQKRIDRARKAAPL 296 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 H + + + I +I+ +++S L H A+QS+ +++Q++ L T Sbjct: 297 AAHIKHVTQCEQDAQRIHAEIQ---EKMRSREQLLMKRAAHVAQQSS-IEEQRRLLQTLH 352 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL-----T 407 ++ R Q + +H+ QQ T Q+ +L L T Sbjct: 353 SACIHIEDAHDVATSIRDISCQAHTLTQHIHTLAQQKTTLTQQEQSLCKELDILQREAGT 412 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 D +A Q + L + A + + + Q++A R Sbjct: 413 IDTRTSAFNDLQIQLAHAKKTQELSQRYAELCAAHATCTAQCEKLEKIHAQKSAYSTRAR 472 Query: 468 QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 ++ + +Q+ + E L L+ +PCP+CGS HP Sbjct: 473 EQLLQTKEQI----HLQETRTHAVVLARL---LEHQEPCPVCGSCIHPNPARQDIDNLEP 525 Query: 528 NQSRLLALENEVKKLGEEGATL-------RGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 R+ +E +L + R + + + Q+Q ++ L + + Sbjct: 526 LTRRMQRIEQTYAQLETSEKDVYHILTSERERRASYSAQMQEIQHSFSILTSCDTRSSCD 585 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 V L + + D + L Q + + AH QQ Q + E Sbjct: 586 IPNVQKITVRVLDLTEKLSRAKDMLACAQHALLRKKQPEQDLQDVRAHLQQCSQELAKKE 645 Query: 641 QRQQLLLTTLTGYALTLPQEDEE--ESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 L TLT + + + LA+ Q Q + + + + ++ Sbjct: 646 TALHALQETLTQQRVRIHALSIRLPKELLASNLLAPQKMQHEKESVAYWKEMLAHCQTLM 705 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 L E E + + A +Q++ + A+++ A+ + Sbjct: 706 RELHTHIEEYDREFNEIENASSALGADIAAREDALNHVQKEYMHLARTVCCARTE----- 760 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + F++ + AALM + L+ Q R L+ + G Sbjct: 761 --AHFNNNEEVTAALMTDAELSHAAAEIQFFNELRAADTHLLKTLEAEI----------G 808 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 + ++++ + + + + L + + +Q+AQ TQ+ Sbjct: 809 TEIPSDLDELNAQCHTLVKDEENFLSRIEILSATLHTLTHQYLKYEECSKQLAQKTQESA 868 Query: 879 DWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKA 928 L+ + K F +A L + AN +L ++ GRY L+ + Sbjct: 869 KLITLSDELNGINQKKIQFDAWALISFLHEITAYANIRLQKMSEGRYHLRVADSHVNARG 928 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEG 985 + L + V D + +VR + TLSGGE+F+ S++LAL L+D + S +DSLF+DEG Sbjct: 929 YQGLALLVADAYTG-SVRPSATLSGGETFMASISLALGLADSIQTRSGGIVLDSLFIDEG 987 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 FG+LD +LD A+ LD + + IG+ISHV ++ RIP +I +KK N + Sbjct: 988 FGSLDEASLDKAIGILDEIREGSRMIGIISHVHELRTRIPHKILIKKTNAGSH 1040 >UniRef50_B9J003 Exonuclease n=78 Tax=Bacillus RepID=B9J003_BACCQ Length = 1029 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 201/1069 (18%), Positives = 417/1069 (39%), Gaps = 86/1069 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + K + IDF + + +FAI+G TGAGKTT+ DAIC LY E Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDF--DDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASG 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 S D E+ F++KG+ Y + Q + + VEL Sbjct: 59 EERSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIKRQLGH-KKQGNKTITGHAVELYEV 117 Query: 120 ADGKILAD----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 D + + V D + L GL +F++ ++L QG+F L ++ + + E+L Sbjct: 118 IDEEKIPAVDRFHVTDVNKKVEDLIGLSKHQFSQIVMLPQGEFRKLLTSETENKEEILRR 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG---------------VTLLTPEQVQS 220 + T+ Y + ++ ++ K + L++ Q + + L ++ + Sbjct: 178 IFKTDRYKLMRELLDQKRKQWKDVLQEKQKERELYFRNVFKLPIRDGSLLETLVEQEHVN 237 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 ++ L E +Q Q + T+Q + + +++ + + ++ + Sbjct: 238 THQVVEALEQETAAYKAEVEQLQVEQDVQTKQLKDAETRFHAAKSVNEKFIDLQQKNEKY 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 L + ++ + AE + L + Q EE Q +L I + Sbjct: 298 NTLQENRTVIEMKETSFKRAEQAKRLLPLEQWHEEAMQNEQKAESLLKQI----IAKKEN 353 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + + + + + + + L + Q L +AE ++ L Sbjct: 354 IMSNFELAQEKYEAVKNIEPEREKAKKFVQRLEELQPIIASLAEKQLNLQNAEIQIGKLK 413 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT--Q 458 L ++ Q Q L Q V + + L ++ + + Q Q Sbjct: 414 EGMQNLDR-QLEEHTNQKQLMSGELQQLERALEQYVDKVEELTNMREDAKVLKQAYDVWQ 472 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + ++ K Q+ V E+ + L G+ CP+CGST+HP Sbjct: 473 EKQKFEQEKETAFTKMQEAVRVYENMERRWLSEQAGILALHLHDGESCPVCGSTNHPKKA 532 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 Q+ +++ L L ++ + + + + Q ++ E + + L Sbjct: 533 TEQS--DAIDEKELNDLRDKKNIAEKLHVQVEEKWNFYHHQYEQVIEEVKKRGYQSEELA 590 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 + + A+ ++ ++ + + + +++ + ++ + + + + Q + Sbjct: 591 ETYSALVQKGKQLATEVNTLKASEETRKQIAVKIKSVEEKVD---ALQKQKRDVETEQHR 647 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 IE L T+ +P+ L T Q + Q +EL +++ +++ Sbjct: 648 IEMDCMQLRTSYEHDKKNIPEN------LQTVQAWKVQFDQAMHELKLMEDEWKKVQ--- 698 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 E ++ + + + ++Q+ Q A ++ +F L Sbjct: 699 ------------------EAYQHWQNENIRIQAEQEGASNQFESAKSKKEETFTRFMKEL 740 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + S F DQ + A + + + L ++ +++ + L Q E + + D Sbjct: 741 EQSGFTDQITYKEAKLSDAEMDML---QKEIQSYYSSLEVLAKQIEELQGELKDKEYMDI 797 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 AL ++ ++ L +K + + I D + + + +QI + + + Sbjct: 798 TALGEHIKDLEINLDIIKEKRQRAQNAVTYIS-------DLHENIRRIDEQIHEEEKAFQ 850 Query: 879 DWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA------- 928 + L ++ + F ++ L+ +V +AN++L +L G++ L+R Sbjct: 851 ELVDLYEVMKGDNESRISFERYILIEYLEQIVQIANERLRKLSNGQFYLKRSERVEKRNR 910 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEG 985 L ++V D + RD +TLSGGE F SL LAL ++D++ I+++F+DEG Sbjct: 911 QSGLGLDVYDAYTGQ-TRDVKTLSGGEKFNASLCLALGMADVIQAYEGGISIETMFIDEG 969 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 FG+LD E+L A+DAL L SG+ IGVISHV+ +K +P ++V K Sbjct: 970 FGSLDEESLTKAVDALIDLQKSGRFIGVISHVQELKNAMPAVLEVTKQK 1018 >UniRef50_UPI000196C4FF hypothetical protein CATMIT_02378 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C4FF Length = 1051 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 187/1106 (16%), Positives = 393/1106 (35%), Gaps = 125/1106 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ S + IDF+ + LF ITG TGAGKTT+ DAI ALY E+ Sbjct: 1 MKPIKLVMEAFGSYASKTIIDFSEP---NQNLFLITGDTGAGKTTIFDAIVFALYGESSS 57 Query: 61 LSNVSQSQ--NDLMTRDTAECLAEVEFEVK----GEAYRAFWSQNRARNQPDGNLQVPRV 114 N + E+ F + Y G + R Sbjct: 58 TLNKKTGTLLQSQFASLDVKPYVELTFSQGYGDDEKIYTIHRIPQHYTYYKAGAKKGLRK 117 Query: 115 ELAR-------CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPK 167 E A DG K + + + L +F + +++QG+F L Sbjct: 118 EKAESGSIALMMPDGSEYPQK--EANKKIIDIVHLTKEQFMQVAMIAQGEFMDVLRKTSN 175 Query: 168 ERAELLEELTGTEIYGQISAMVFEQHKSARTELEKL------------------------ 203 E+ E+ +L TEIY I + ++ K + + Sbjct: 176 EKKEIFRKLFHTEIYNDIVEELNQRRKETEKSIGDIKTKCMSEAGHLSVDEGYEQLVFYI 235 Query: 204 ----QAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDEL---Q 256 + + S + L E + L ++++ L ++ +++ L + EL Sbjct: 236 EAIKRGEISYLDELVQELEVYCKIQEEKLNEQKQSLNETEKLKEEKKFQLDKGRELIDAY 295 Query: 257 QEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEV 316 + L +A +E + S A ++ ++ + L + ++ Sbjct: 296 SNLEVASKQLTALVAHKEVIENNYKMASTIDHAYKIKQAYDAYVDADKQLKLTQSKL--- 352 Query: 317 NTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT 376 + L+ LR+ K + + ++ + QE D+ ++ + + + + Sbjct: 353 DEELKREPELRSKYEELKEKDNRADIKHEEFVRYCTQETDKTKKDLDNRKTLSDKTKEIS 412 Query: 377 SDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIV 436 +H +QL H + +L + + + + V L Q Sbjct: 413 DINKHTDDSIEQLNHIKNSKKSL--------VKKQEEGKKELDTLKDVDTEAVVLESQRK 464 Query: 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTL 493 + ++ +++ Q + + Y ++ I E+ +I Sbjct: 465 DFKLKVESYNQLVKDFNSIQIK-EKEFITTQHNYARLSENYGKKNHIYEEANKIFLDAQA 523 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 + L G PCP+CGS HP+ + + EE LR Sbjct: 524 GILASTLVEGTPCPVCGSIHHPSPACLKEGKVPT---------------KEELKDLRETK 568 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ----PWLDAQDEHE 609 D +Q++ +A SL+ + ++ + L L+ +D++ ++ + + Sbjct: 569 DQALILMQKESAKASSLKTTLDDMKTKYDLDLSKLGAILECDNDLELFEKTLVNEKQILQ 628 Query: 610 RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 +Q L + E ++ + I +Q E+++ + + Y + D S L Sbjct: 629 QQADHLRDKKERFNELNTLLESIDIKLKQYEEKETAITEAIHQYEVKKASLDTTISQLKN 688 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 + A +++ L+ L + E + + Sbjct: 689 QLSYAS---------------VEEAQKALDKLIKDQEAEDIAYKLFKQKVSASQTAYDKC 733 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 H+ T + + +++A + ++ DD Q ++ ++++ Sbjct: 734 HTLINTYNESLPRLKERVEQADNHYSHLVEELQCDDWQNIISKY-----------QEKDI 782 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + Q + + +E ++ + + ++ E Q + + Sbjct: 783 QQFNEQYISYTRKFSEYTSKKETIEKGINGQPCPELTVLENEYNQAMDTYKNQAGVVQVL 842 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL-NSLIGSKEGDK--FRKFAQGLTLDN 906 + ++ ++ ++ + L N L G+ G + + Q L+ Sbjct: 843 EHNYTNNNESLNTLDDIVTHAKKLIHKNHQLTTLYNQLSGNVSGSRMDLETYVQRTYLER 902 Query: 907 LVHLANQQLTRLH-GRYLLQRK--------ASEALEVEVVDTWQADAVRDTRTLSGGESF 957 ++ AN++ + G+Y L K ++ L++ V ++ D+ R+ TLSGGESF Sbjct: 903 ILVEANRRFYDMSAGQYELHLKNIEQAGEGKNKGLDLMVY-SFVTDSEREINTLSGGESF 961 Query: 958 LVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 + +L+LAL ++D + + +D +F+DEGFG+LD + D A+ L ++ K IG+I Sbjct: 962 MAALSLALGMADEIKESAAGIDLDIMFIDEGFGSLDDHSRDEAVKVLMDMSEGTKLIGII 1021 Query: 1015 SHVEAMKERIPVQIKVKKINGLGYSK 1040 SHV +K+ I Q+ V K + + K Sbjct: 1022 SHVSELKQEIEDQLVVSKDDNGSHVK 1047 >UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=SBCC_VIBCH Length = 1013 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 241/1052 (22%), Positives = 432/1052 (41%), Gaps = 74/1052 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ G +IDFT+ LF I G TGAGK+++LDAIC ALY ET Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTK--LGDAPLFLINGATGAGKSSILDAICYALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA--- 117 + EFE+ G Y+ ++ + G + A Sbjct: 59 SERTGDQMRCDYAAPESLTEVIFEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLV 118 Query: 118 --RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + +++A+K + L GLD +F + M+L QG+F L A KER ++ + Sbjct: 119 ALKSDGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQ 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEKQ 234 L T++Y QI +FE+ R E E+ Q G ++++ E + L L L Sbjct: 179 LFQTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTH 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + + EQQ + + E ++ QQ + E Q Q + + + R Sbjct: 239 AQSQLKAEQQQWDETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQ 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 R+ ++ +++ +++ + ++ A Q + QQ Q + +E Sbjct: 299 KAARLTAVHQQWHQAQKNLQQAKLKVEQ----QQTLLQQAKAQQQQAQQASQQASLACEE 354 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + + + Q + ++ + + +++L A Q L + L + Sbjct: 355 VPKLNEQRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQQASEKLEQELQNQR 414 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY---K 471 L +QR L + + + + Q + Q + Q++ E AL Q++ + Sbjct: 415 LEWEQQQRQLTR--LEVQKARMNQLVQQVQAREREQSLLNELQTAQQALLRFEQQHHHIQ 472 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 + +Q E + L +PCP+CGS HP Y + Sbjct: 473 TQAEQAKLTADKLEFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSG-----DVVT 527 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 + +E ++ + + A +Q + E AQ+L LT Q A+ L Sbjct: 528 KVQVEQARQQQQDWVQRQQEAFHAWQQQGFKTEQIAQNLTTLSSELTLQQVALLNELIEQ 587 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 Q L L Q +QI + +Q++ + L Sbjct: 588 QQILHSDIAALQ------------------QLNPDLLKRQIEEGEQRLAHTKMTLEKQNQ 629 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 + ++ LA+ +QE EL+ L L + + E+ Sbjct: 630 NQQQAWQTLAQLQAELASLRQEIPP------ELSDL----DTLRSAIGRVQNQIEILQKA 679 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 E E W Q +Q ++ + Q + + + ++ + + L S F D+ A+LA Sbjct: 680 EHTAREQWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTSAWQQGLLHSGFSDESAYLA 739 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A + ++ + +E+ E R A Q A + +++RP+ +E + + Sbjct: 740 ARLTDEAIVNIERQIAQYE--ERSAMLSGEQQALSRKLAEKNRPE--------LEPLLVK 789 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 + Q +K+ + + + ++ +Q L Q+ + + + G L+ + K Sbjct: 790 VTQAEEKMALALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGTLSDIANGKT 849 Query: 892 GDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------SEALEVEVVDTWQ 941 G K +F G+ LD+++ A+Q+L ++ GRYLL+RK L++ V D++ Sbjct: 850 GAKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGLDLMVEDSYS 909 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+DEGFG+LD E+LD A+ Sbjct: 910 G-KWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAI 968 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 L L G+TIG+ISHV +KE+I +++ V Sbjct: 969 QTLIDLQQGGRTIGIISHVTELKEQIGLRLDV 1000 >UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T8_ERYRH Length = 1021 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 225/1077 (20%), Positives = 419/1077 (38%), Gaps = 97/1077 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ E +DFT+ GLF ITG TGAGKTTL DAI ALY Sbjct: 1 MKPILLSMRAFGPYFEETTVDFTQ---FHQGLFLITGDTGAGKTTLFDAISFALYDVASG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 +S + E ++ F + E YR R + G +Q V+L Sbjct: 58 SQRQPESLRSDFADASVETYVDLSFSHRNEIYRIVRKPRYERLKARGEGTTVQNATVQLY 117 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 DG+ L D +K + GLD +F + ++++QG+F LNA +R+++ L Sbjct: 118 -LPDGQEL-DDIKTVNAKIIEIVGLDAQQFKQVVMIAQGEFLELLNASSNKRSDIFRTLF 175 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGV--------------TLLTPEQVQSLTA 223 T Y ++ + +++ + ELE + + V E L Sbjct: 176 DTRFYLKLQDKLKQKNLELKRELEHTKQEVKSVLAGLPNLVESIEYTGFNLEEVYSDLKG 235 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 QV+ D++ + Q+ Q+ + + + + + L++ E E+ L Sbjct: 236 KYQVMVDQQTAYLIEQKNLNQTRDVILESIKSWETYQQTLAHLKEKEREAEEL------L 289 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 S + LR E L +R +E ++ + I + Sbjct: 290 SQKEHYEKLRIKLETQTLIFNQLMPLRHGLEANKQKIFAIKHRYHDIHEKNKEVQKRFVD 349 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 QQ T + Q + ++ Q E L+ ++ ++L L ++ Sbjct: 350 IQQQYLTRNDRLKQLEQVKRQVEQYQKMLPQ----YEILKSTKESYNAVIKRLGELH-LS 404 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA----QLQVAIQNVTQEQTQR 459 T ++ LR L + + Q+ +L Q ++ ++ + T+R Sbjct: 405 ETHIVKQLENQEELKNTLELLRDRSYELEKEKIVQEHQLETYLGQRELVLKRIESFDTKR 464 Query: 460 NAALNEMRQR--YKEKTQQLADVKTICEQEARIKTLEA---QRAQLQAGQPCPLCGSTSH 514 L ++ +K ++ +V + Q+ E L+ CP+CGS H Sbjct: 465 ELELLLENEQDAFKIAEKEYIEVNELLIQQELRYYKEQAGLLAQNLEDDSACPVCGSLDH 524 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 P + + ++ ++ EV K E I ++ + +++D+ Sbjct: 525 PNPARL--MNSVLTYDQIQEIKQEVFKKQEVQQNQAQTCHVINTKITSIN---EFIKEDD 579 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 + T+ A LN L + D++ ++ + L L + + Q + Q Sbjct: 580 ENATR------AELNEILIKIQDLKSLIELKRVEHETLNLKIKT------MREQQQNLEQ 627 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 ++ + + ++ L +A + +S L + I+ L Sbjct: 628 LKKNLVELKESLKQEHMRHAALKSEIKMIQSNLEF-------------------DNIESL 668 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 +E L + +E LE ++ V + L +Q+ + +Q + Q QF Sbjct: 669 LAKIEPLDHQIKEMEAKEQQNLELYQSVSTELEQLKTQESEIAKQLKTEEKEYQLKHQQF 728 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 L D Q ++E TL + +N + + Q ++ + + Q ++ Sbjct: 729 HD-LGDKYNLDIQEIEWESLNEMTLKNDALMLRNYDERIIQIRS---EINQLKTQREKKP 784 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 P LT +I+ + ++ +++ +T+ + L++ ++ TL +Q A M Sbjct: 785 PHTLEYLTEEKHKIEGSIVSLNKTIQDASTNMTTLESILRRFDSIQKNSLTLERQGAIMD 844 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK------ 927 N + K+ + Q D +V AN++ T + RY+L R+ Sbjct: 845 ---GLSKTANGDLSGKQKIALEHYVQSAYFDYIVEEANKRFTPMTSNRYVLLRQEKAERL 901 Query: 928 -ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 L+++V D + +R ++LSGGESF SL+LAL LSD+V S R+D+LF+D Sbjct: 902 NTKSGLDLDVYDQYTG-KIRSVKSLSGGESFKASLSLALGLSDVVQRFSGSVRVDALFID 960 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 EGFGTLD +L A+ +L L + + +G+ISHV +K I QI + K K Sbjct: 961 EGFGTLDEASLQQAMKSLTDLAGTAEYVGIISHVPELKTLIEQQIIISKTEKGSAIK 1017 >UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 Length = 1023 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 227/1082 (20%), Positives = 434/1082 (40%), Gaps = 107/1082 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ + + IDF E + +F I+G TGAGK+T+ DAI A++ + Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDF--EKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANT 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW--SQNRARNQPDGNLQVP-RVELA 117 S S D + F +K + Y+ Q A+ + +G P + EL Sbjct: 59 FDRESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELY 118 Query: 118 RC--ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K+LA V+D L L+ +F + +++ QG+F L + KE+ +L+ Sbjct: 119 ELIGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQR 178 Query: 176 LTGTEIYGQISAMVFEQHKSAR---TELEKLQAQASGVTLLTPE------------QVQS 220 L T Y ++ +++E+ K A E K A+ + ++L E Q ++ Sbjct: 179 LAHTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPDVEITGKTTSEISVLQTEA 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDEL---QQEASRRQQALQQALAEEEKAQ 277 + VL + E +L ++Q +++ +T E Q + + + AE+ + Sbjct: 239 IQKEQTVLAELESELSIIRKQTSEAVEKVTLAKEQLLDWQNLDLYIEEVAKLEAEQGVYR 298 Query: 278 PQLAALSLAQPARNLRPHWE---RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA 334 + A+ A N+R R+ E H +Q+ ++++ + Sbjct: 299 AIEGRIEAAKRASNIRSQDALCIRLKEQLETAEHTEKQVATATEQVKAQFLHAKKQKETL 358 Query: 335 AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ--WQQQLTHA 392 A+Q EL+ +++L + + ++ R + +HL + +Q A Sbjct: 359 AEQEKELETNKRTLFQLEEMEPKIMEFETVIIQKRRAEMEWKEATDHLEKVMKTEQDVIA 418 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 E KL + A+ +H + L + L + + Q Q + Sbjct: 419 EIKLAESQLTEINQAELAHLEAINKHTTVKALIEKNQELVNKRAKMAAWDLEKQTEEQTL 478 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 Q T++ ++Q+ ++ A + L G CP+CGS Sbjct: 479 AQLLTEKTTIETTIKQQETNLQKEQA---------------ASLATHLHEGDACPVCGSV 523 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 SHP + + L + ++ +S+ Q Sbjct: 524 SHPKLAEFGE--------------------TANFEILEAAKGQLHEKELAINEAEKSINQ 563 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL-SQRHELQGQIAAHNQQ 631 E L + +L+ T Q L + + + + QL+ +Q+ +Q + + Sbjct: 564 LEWQLNEWADVTEVNLDETKQILAENKLLAENLAKKIDQLQTKTAQKATVQSNVETLKNK 623 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + + + + L + E + ++ + +++NELT Sbjct: 624 QNETETVKNHIALQVENSHQQVQLATGKLSYLEESIPVDLRDKVMFDKKKNELTT----- 678 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 S E + V ++RQ + L S Q+ Q+ A ++LQ + Sbjct: 679 ------------SIETHLKQAEQVDASFRQADKDITRLESTLQSAQKTTADAQEALQVQR 726 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 F A++ + F +++ ALM L E+ N E +R A + E L Q Sbjct: 727 EIFKEAMKQNDFPTYESYKQALMSVDELKVQEEKVTNFERKRHLAISRQADLTEKLKNKQ 786 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 +EQ++ + + Q+L + S + R+ + + + Q +Q + Sbjct: 787 ----------KPNLEQLEFSMKEKQQQLTKAEESTMKQRELVTKQKEVVLNYQNSIQAVE 836 Query: 872 QMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA 928 + + D G L K + F ++ + LD ++ AN +L+++ GR+ LQRK Sbjct: 837 KAEEDYADIGLLADAARGKNARRLTFERYILAMFLDTIIQRANHRLSKMTSGRFELQRKM 896 Query: 929 SE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRID 978 + LE+EV D + R +TLSGGESF SLALAL+L+++V + ++ Sbjct: 897 EKAKGNVQSGLELEVFDEYTG-LTRHVKTLSGGESFKTSLALALSLAEIVQEMAGGISLE 955 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 ++F+DEGFGTLD E+L+ A++ L +G+ +G+ISHV +KERI +++V N Sbjct: 956 TMFIDEGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGST 1015 Query: 1039 SK 1040 +K Sbjct: 1016 TK 1017 >UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUY7_9AQUI Length = 975 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 221/1050 (21%), Positives = 454/1050 (43%), Gaps = 80/1050 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ K IDF+R F F I G TGAGKT+++DAI ALY + PR Sbjct: 1 MRPLKLELEGFTVYKKPQSIDFSRLNF-----FIIQGKTGAGKTSIVDAITYALYGKVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + ++++ + +EF V G+ YR + + Sbjct: 56 YGRSRSTTSMVLSKGSNRLKVSLEFSVGGKRYRIERFYRE---------KPKEDIVRVEE 106 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN-AKPKERAELLEELTGT 179 +G+ L K + E ++TGLDY FT+ +LL QG+F FL + P+ER E+L +L Sbjct: 107 EGRRLDLKKAEVEEWVESITGLDYNTFTKVILLPQGEFDRFLKPSSPRERREILIDLLNL 166 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 EI+ ++ + + + EL L+ + + L+ E+V+ + + L + ++L Sbjct: 167 EIFDRVRELASRNYSALEGELNALKTELESLEGLSEEEVKEIENRRKALQERSEELKRVI 226 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + ++ L ++E ++E ++ L + L+EEE + ++LA+ P+ ER+ Sbjct: 227 SELEERLRRAREREETRRELEEAKEKLSKLLSEEENFKALRERINLAKKVLPYLPYIERV 286 Query: 300 AEHSAALAHIRQQIEEV---NTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 E L +R Q E+V R++ + S + + A L + ++ L + E + Sbjct: 287 EELGRELRELRLQKEKVLKDRVRVEGELKNIESEKEEVERAYASLPKLREELQSLAGERE 346 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 R E R+ L + ++ L E+KL A + + Sbjct: 347 RLSLAGEEIRSIEELAESLREKRKQLEEKEEVLKDREEKLQKGEAYIRQIEEELKELGYD 406 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 + +R L++ V ++ QK+L L++ ++ + ++ ++ L E+R K+ ++ Sbjct: 407 EEEYERLLKE--VERKRTLLEDQKKLENLKIELKELEGKRKEKLRELEELRAELKQAEEE 464 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 L R L G CP+CG+ A E + + SR+ L+ Sbjct: 465 LQKRSLKVYAHR-------IREHLHDGDTCPVCGNIYSGAYEEVEGADIEELSSRVKELQ 517 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 ++ +E +TL ++++I+ + + ++ + + + + L Sbjct: 518 GKLITSEKELSTLEAKIESISLEAESLSSKLKGWENVLKIDIEGRLGEL-----EKKKLK 572 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + + ER + L +R E ++ ++ ++ + +++ L L Sbjct: 573 KKELEDKLRKYSERYNQRLKEREEALREVERLRSELASLERSLSEKRNKLEGML------ 626 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 + + Q+ +N L+ L+ + L +E + + E + + + Sbjct: 627 ---------------GKVPTLQEVENRLSELKRKESDLRDKVEEIERRREEVNSYQEELT 671 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + + + ++ +++ + L + D + M++ Sbjct: 672 RKLVALDTRLKEIEGSLESKEREKRENNRKLAPLFEELG---------DIERVREYSMEQ 722 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + L+ LE+ +N ++ + + + LA ++ T VE++++EL Sbjct: 723 EKLSSLEKELENYLTEKNSLEERIRELESKLASVEE---------TEAVERLEEELVGKK 773 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 +L E GE++ +Q + ++ L ++++++ +++ + ++ + S ++ + Sbjct: 774 GELEELIRRAGELKSLAEQKREMLDKKDNLTRRVSEIEKEIGLYSRISEDLKS---NRLQ 830 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 F L L +V A++ L Y L E E+ V+DT Q RD ++LSGGE+ Sbjct: 831 DFVASLMLKRVVERASEYLHEFTNAYYL--GMDEKGELVVIDTVQG-TERDVKSLSGGET 887 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVIS 1015 FL SL+LAL +SD++S ++SLF+DEGFG+LD ET + D L+ + + +G+IS Sbjct: 888 FLASLSLALGVSDVLSADAHLESLFIDEGFGSLDEETRERVSDILEVIKQRINRMVGIIS 947 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 H+ + +R +I VKK +S +E + Sbjct: 948 HIPDLADRFHQRIVVKKHGD--FSTVEVFY 975 >UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M1_9LACT Length = 1019 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 199/1064 (18%), Positives = 422/1064 (39%), Gaps = 68/1064 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + K + IDFT+ F LF ++GPTGAGKTT+ DAI ALY + Sbjct: 1 MRPLKLVMNAFGPYKEKVVIDFTQ--FQQQTLFLVSGPTGAGKTTIFDAIAYALYDDASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S S D C E+EFE+ G Y S + +G L+ E+ Sbjct: 59 TSRGKDSFKSQFASDEVLCFVELEFEIAGRNYFIKRSPVQIGPGKNGKLKKWSSEVEFHH 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G + K+ + + L L Y +F + ++L QG+F L + ++ ++ + T+ Sbjct: 119 NGTV-TTKISEANKEIQELLSLSYEQFKQIVMLPQGEFKKMLESNSADKEKIFRNIFQTD 177 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDE---EKQLIT 237 + +++ ++ + + +++ ++ + PE + +L D ++L Sbjct: 178 TIKDLQSLLKDKASNLKQGMDQSESTLQQFVGMIPENSNEILREAILLYDIPTIMEELTR 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + + + L ++ S Q L E + + L + Sbjct: 238 LVESYKAKIQLLEKELATLDTLSHNNQRKIDLLVALEILEEEKEILGSNAELIEAKRLGL 297 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 +A+ + +QQ+E + Q+ + + + L + ++ ++ + Sbjct: 298 SLAKQAEECFETKQQVERIANEKQAIELELTKEQKQLTETAECLLETEKMYHSLQVAYKE 357 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL--------TAD 409 + Q Q + + + + K A+ + + + Sbjct: 358 LPNKREALISLKEQEKQLSEKTTKEKAIGELEQENDAKQQAIKQLENQVFIGKEQLEKQE 417 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 + Q +Q + Q + KR ++ + ++ + +E+ + Sbjct: 418 RTLQEIQQAKTSIMEKQRETSKLQQDQHETKRQQEVLLVFSGYLTKRAAKQKEFHEIESK 477 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 +K+ + + I ++L+ Q C +CGS HP+ + + V++ Sbjct: 478 FKQVESHYQEQRLIY----NRNIAGILASELKKEQACSVCGSLHHPSPA--KLGQDTVSK 531 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 L LE ++G++ + +L +++ +Q +E + L AL + + ++ Sbjct: 532 EILEELEANKNEIGKQFDRISIELQGLSEAIQSNE---KQLGIQSTALQDEQSKIEQRIS 588 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 + + L A ++ +++ + + + +Q+ + + +++Q + Sbjct: 589 EETMKQEKLTGELKALQKN------IAKEEQAEKEKRDTARQVSENEAKMQQLASAVQYN 642 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 + D ++ L +L+A+Q I + + + + Sbjct: 643 TKRIIELKIEIDTLQTKLT------------LTDLSAIQIEISEKINEITRIEEEYSEAQ 690 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 ++ + + Q A Q TL +++ + F L S D ++F Sbjct: 691 EKKVRLEKAQTQYQTSTKAYEKQLSTLMERETDVKE-------VFAQKLSESQLD--ESF 741 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 L+ ++ QL + + QT + + LA+ + + I+ Sbjct: 742 EKYLVGKEAKLQLIDEIAAFDKKMWTNQTSMLEKKGNLAKEGAEQ--SIETYQTKNQAIE 799 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 E ++LRE ++ ++ L Q N ++ ++ ++ + + Sbjct: 800 LESTAFKEQLRELIGTEKTVQSILSQIQFNYHAKKGQQEEYL----MYKELSEMANGSKE 855 Query: 890 KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEVEVVDTWQ 941 + F ++ G+ + ++ AN + T++ RY+L R + L+++V D + Sbjct: 856 TDYISFERYVLGIYFEEIIEAANTRFTQMTIDRYVLIRNKEKTKGAGPKGLDLDVFDNYT 915 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 R +TLSGGESF SLALAL LSD++ S +D+LF+DEGFGTLD+E+LD+A+ Sbjct: 916 G-MKRSVKTLSGGESFKASLALALGLSDVIQNHSGGVSVDTLFIDEGFGTLDAESLDSAI 974 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 + L LN G+ +G+ISHVE +K RIPV I+V K + + ++ Sbjct: 975 ETLFELNQRGRLVGIISHVEELKTRIPVHIEVTKSSEGSQAAIK 1018 >UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri L37603 RepID=C4WAQ8_STAWA Length = 1009 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 199/1060 (18%), Positives = 409/1060 (38%), Gaps = 93/1060 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L+L N E IDF N LF I+G TG+GKT + DAI ALY E Sbjct: 1 MKPMMLKLNNFGPFLNET-IDFRN--IDQNQLFLISGKTGSGKTMIFDAIVYALYGEAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + EFE+ + ++ + + Sbjct: 58 KNRKENDLRSHFADGNSAMQVTFEFELNDKLFKIVRTGPFVKEGNTTKTPAKLNVFEYIE 117 Query: 121 DG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + + V + L G++ +F + +L QG+F FL + KE+ +L L + Sbjct: 118 NEFDLRESMVNAGNQFIIDLIGVNAEQFRQLFILPQGEFKKFLLSNSKEKQGILRTLFNS 177 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E + +I + E K+ + ++E+ + + L+ + + I Sbjct: 178 ERFEEIEKRLNENVKNEKIQIEERYKNIERLWNDIHTFENNDLEELKSINVHQTDKINEV 237 Query: 240 QQEQQSLNWL--TRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA-RNLRPHW 296 ++ E ++ + ++Q L + ++ + L L + + L+ + Sbjct: 238 LHRFNEFGEKIGRKKYEQKKSHENEIEKVEQKLNDNKELESNLNELKKNENELKQLKQNE 297 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 I +H A L I +I+ ++ L A ++ + L + Sbjct: 298 SFINQHRAKLNKI-NEIKPLSQLLDRNEAANKKLKQAEKSIEIAVHSINNLLKEKEENQL 356 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 Q + + + Q L ++K L++ + L Sbjct: 357 GLNQLSEQEESINKEKDYLEKTNTFYNNLSQYLNSYKEK-ERLSSQLVNLNEKSELVERE 415 Query: 417 QHAEQRPLRQ------HLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 ++ H+ L I +K + Q + ++N Q + + N+ LN+ + Y Sbjct: 416 LLELNEAIKSKEINYSHVEQLSQDIFNIEKEIEQAE-KLKNDMQIKEELNSKLNDTKASY 474 Query: 471 KEKTQQLADVK----TICEQEARIKTLEAQRAQLQA----GQPCPLCGSTSHPAVEAYQA 522 +K ++ D+ I + E + E QLQ G CP+CG+ Sbjct: 475 NQKCIEIDDLSNKLYEIDKTEINLNNKETLVEQLQQVVSLGDTCPICGN----------- 523 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 E +L +D + + +N QSL++D + Sbjct: 524 ----------------------EITSLGQHIDF--DSINKKQNLIQSLQEDLNKMNINKA 559 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + +SLN + +++I ++ + E +S++ E + + N+ I++ +++E++ Sbjct: 560 KLESSLNHLTEQINNIYIDQNSIPDIENLYSKISRKKEEKEKQQKENEFILKTNKKVERK 619 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 +Q + ++ E + + + E+ ++ ++L ++ Sbjct: 620 RQETFEIRNEVKNAESKIEQCEIRINDFESTTKH-----TEIDEFESYFKKLKSNVDHYL 674 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 +S E +++ + +Q+ +++ Q + + Sbjct: 675 KSLEEHQQNRNEIVQKLSIEENNLQHHKQTKNEIQE-------DIKQTQQAIEAEMNRLN 727 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 D + + ++E + + Q + + + + E +A + Sbjct: 728 IDSIEQVQDIVKIVNEKEEIENEIKEYDKQIHKYELEMNRLKELVAGKK----------L 777 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E+IQ+ L+Q +L + QLK + + + ++ + + ++ +D Sbjct: 778 DNIEEIQKALSQLKVELEHLNHEIATLEYQLKLNQQKVDEIVSNIEYLNKELKEQQDIFN 837 Query: 883 LNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEV 934 L ++ + K + L+ ++ AN +L + G RY LQR+ + LE+ Sbjct: 838 LAEILSGRNSQKLTLENYVLIYYLEKIIAQANLRLATMSGQRYQLQRREALSQGFSGLEI 897 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 +V D + ++ R +LSGGE+F SLALAL LS++V S + S+F+DEGFGTLD Sbjct: 898 DVFDFY-SNKARHISSLSGGETFQASLALALGLSEIVQQESGGISLQSMFIDEGFGTLDQ 956 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 ETL+TALD L L ++G+ +G+ISHV +K+RIP+ ++V Sbjct: 957 ETLETALDTLVNLKSTGRMVGIISHVSELKQRIPLILEVT 996 >UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8R3_PAESJ Length = 1030 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 228/1079 (21%), Positives = 410/1079 (37%), Gaps = 82/1079 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L + + + +DF+ + LF I+G TGAGKTT+ DAIC ALY Sbjct: 1 MRPLKITMTAFGPYRDAETVDFSE--LGEHRLFVISGSTGAGKTTIFDAICFALYGTASG 58 Query: 61 LSNVS-QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + D E++F V YR F R + + + EL Sbjct: 59 EDRSEPRMLRSHFADDEKHTAVELDFAVGRRMYRVFRQLPH-RKGANKSETGGKAELYEL 117 Query: 120 ADGKILAD----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 G+ + V D T+ GL +F + ++L QG+F L + + E+L Sbjct: 118 TGGEAVPAVDRFMVGDVNAKLETIIGLTKEQFNQIVMLPQGEFRKLLTSDTDNKEEILRR 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV-----TLLTPEQVQSLTASLQVLTD 230 + TE+Y ++ +Q++ +L++ + + L + L +L Sbjct: 178 IFRTELYQRLETRFQQQNRELGDQLKEAKIRVDHFMKQAADNLPRREDSQLAQTLAQELY 237 Query: 231 EEKQLITAQQQEQQSLNWLTR-----QDELQQEASRRQQALQ-----QALAEEEKAQPQL 280 QL A +QE L + ELQ++ ++QALQ QA E ++ Sbjct: 238 NAAQLSEALEQEIGYYRQLIAEGESGKRELQRQLGEQEQALQGELALQARFAELASEQAK 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 AQ + + AAL + R + +R AA+ + E Sbjct: 298 RERLAAQSGEHAERERRLLLAERAALLAPYAEQAVRAERDAAAKQQARDMRRQAAEAAKE 357 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + +E RQ A+ + E R +QL AEQ A Sbjct: 358 ALAAAEERYRREEERGAERQAAERELHRLAELAPAVQTLEAQRVAVEQLAAAEQSGAAKL 417 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 L A+ L + + + + AL +V Q+ ++ Q I + + + + Sbjct: 418 TSAEALIAEAKEAKLTLATQLKAIEGAVEAL-PSVVEQRNQVLQTGKYISKLIELEKELV 476 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + + + +R Q + + + A L GQPCP+CGS HP Sbjct: 477 SHSSVIEERALSLAQIREEHDRLERNWIEGQA-SLLAAHLHDGQPCPVCGSQEHPG---- 531 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 K + E R QL +QL R E E + A Sbjct: 532 -------------------KAVAAEAVPSREQLQQAKEQLSRYERELNEAKLQAAATRSS 572 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 W+ A L + + + Q E ++ + L++ E G +Q+ Q ++IE Sbjct: 573 WEGSAAELA---EYGAEASGLAEQQGELRKRWKQLNEEAERLGAQVEQGKQLKQRAEEIE 629 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 Q+ + LL Q E R + + ++ + +Q+ L+ Sbjct: 630 QKLEQLLQEKDKLQAEQQQIAVE------RGAKQSALEKELERIPEELRSPKQMELRLKQ 683 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 E + ++ + + + +QQ A + A +F+ L Sbjct: 684 QRSLAESLAAAWKEAQDGLLRMRAKFAEEQAHAEQTEQQLAEARVNAALAAKRFEEELAK 743 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + F ++AF A + +Q L++ + A+ + + + L+ QQ Sbjct: 744 AEFSSEEAFREAHLPDQERRALKEQLEAYNTALAAARKRIEELEQELSGKQQ-------- 795 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 +E ++ +A+ +++ T + + + R ++ ++ ++E Sbjct: 796 --ADIEALKAAIAELKERIEAATNALQIASRFAEDAGKLRTAIDQAAAKVKELEAKLEQV 853 Query: 881 GYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASE 930 L ++ K F ++ L+ ++H AN +L L G+++LQ R Sbjct: 854 LDLYQMLKGDNALKISFERYILIEYLEQILHAANVRLRHLSGGQFVLQRSDRLETRGKQS 913 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 L ++V D + RD +T+SGGE F SL LAL ++D++ I+ +F+DEGFG Sbjct: 914 GLGLDVYDAYTGQN-RDVKTMSGGEKFNASLCLALGMTDVIQSFQGGVSIEMMFIDEGFG 972 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 +LD ++L+ A++AL L SG+ IGVISHV+ +K P ++V K GYS+ Sbjct: 973 SLDEDSLNKAIEALVDLQRSGRMIGVISHVQELKAAFPATLEVYKTKE-GYSRTSIAVR 1030 >UniRef50_A3TKY1 Putative exonuclease n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TKY1_9MICO Length = 1047 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 218/1099 (19%), Positives = 375/1099 (34%), Gaps = 109/1099 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L E +DF + + GLF I GPTGAGKT+LLDAIC AL+ + P Sbjct: 1 MRIHHLTATAFGPFPDEIAVDF--DALTAAGLFLIHGPTGAGKTSLLDAICFALFADVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-----RVE 115 L + +D TA E+EF +R S AR + G + + Sbjct: 59 LRDKRGIVSDHAAP-TATPSVELEFTCGTRRFRIHRSPAHARPKKRGTGTIEAPATVTLS 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R + +++ + + E+ + G+ +F + +L QG+FAAFL AK +R LLE+ Sbjct: 118 ELRSSTWTVVSTRNDEAAEVLNDVLGMGKEQFAKVAMLPQGEFAAFLTAKDDDRRALLEK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQ-------AQASGVTLLTPEQVQSLTASLQVL 228 L + + + ++ +++ + L+ A+ + V + +S Sbjct: 178 LFDITRFADVEEWLVDERRASEATVSSLRSGIDTDLARLADVVAASGLAQESFDDGEAPA 237 Query: 229 TDEEK------------------------QLITAQQQEQQSLNWLTRQDELQQEASRRQQ 264 DE L + +L+ + + R + Sbjct: 238 VDERTLDGRPALDPASPDAIRALLDATGIDLDAHVSEAMVALDAAVAAESAAATDAERAR 297 Query: 265 ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTM 324 + A+ +A L Q + A +A++ I + L+ Sbjct: 298 GVMALRDRARVARTTIADLDAVQEDISAARLTHDAASRAASVRGHVAAISREASELERAR 357 Query: 325 ALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ 384 A + A + + L+ D R+ A +DR L + Sbjct: 358 AAVGAASARARTMAPDACDPTTLLDDLRVHDDTLRELVRLEASR--------ADRASLAR 409 Query: 385 WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 H + A A + A AE V +A Sbjct: 410 G-----HLDAITAATAILETADADRAAVAARVSGAEVALADALEAEASRDGVEGTAEVAC 464 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 ++ + E L + Q D + + L GQ Sbjct: 465 DRLRLARRVVEDELTVTRLVAHAADARSAAQDARDHEQDIVARRLSQMAAELAESLVDGQ 524 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 CP+CG+ HPA E ++G LD Q Sbjct: 525 SCPVCGAHEHPAPAR------------------EGDRVGPSA------LDDARLQHAALS 560 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 Q + L++ D+ + ER+ + R + + Sbjct: 561 RAHQQSEAAAASAQALLTEALKVLDVDAARDLDLAGLAVEVESAERRRSTVRARADKR-- 618 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 AA + + + ++++ + T A ++ + A A + + +E Sbjct: 619 -AASEKVLATARTEVQRLDAAVTTAQQALARATTMAEQAQQAEAADAAAAHALLEAHSEC 677 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 L L T + + + L + QT + + Sbjct: 678 PCLSASEGTLAGRAAT-----NTRTSVAGDAVPAIHTLVQAHQRLTTVAQTWDEALRRSD 732 Query: 745 QSLQKAQAQFDTALQAS---VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 ++L + + + L A+ F AA++ L +L + + R A ++ Sbjct: 733 ETLARFTSATEVGLAAAVEAGFASLDEASAAMVAPAALDRLRDRLHDHDRARASATAVLG 792 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLREN---TTSQGEIRQQLKQDAD 858 A + D LT +Q + L E S +R +L D Sbjct: 793 DADVIAA--ESAPAPDLAELTSAAQQARSALLTAQSAQTEASAARRSFTAVRSRLVAGLD 850 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 +I ++ G N+L + F LD + LAN++L + Sbjct: 851 AAGPALMHHHRIKELADTFTGGGLNNTLR-----MRLTSFVLAARLDTVARLANERLRIM 905 Query: 919 -HGRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 GRY L+ R A L + V+D W R+T TLSGGE+F+ SLALAL L+D Sbjct: 906 GDGRYTLEHTDRLAARGARSGLGLRVLDQWTG-VSRETSTLSGGEAFMASLALALGLADA 964 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 V S + +LF+DEGFGTLD E+L+ + LD+L G+ +GV+SHV ++ RI Q Sbjct: 965 VREESGGFDLGTLFVDEGFGTLDDESLEQVISVLDSLREGGRAVGVVSHVGELRSRITSQ 1024 Query: 1028 IKVKKINGLGYSKLESTFA 1046 + V+K + + A Sbjct: 1025 LVVRKTANGSTVDVSTPGA 1043 >UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E3_9FIRM Length = 1026 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 235/1075 (21%), Positives = 431/1075 (40%), Gaps = 85/1075 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR++ S E +DF A I G TG+GKTT+LDAI ALY E+ Sbjct: 1 MRPLKLRIQAFGSYVDEQILDFET-ALADAPFLLIHGVTGSGKTTILDAIVFALYGESSG 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR-NQPDGNLQVPRVELARC 119 E F + YR S R ++ + +L R Sbjct: 60 DIREGAMLRSSTASPDRTTEVEYVFALGQRRYRVLRSPAYFRMSRGKMTRRAATGQLFRL 119 Query: 120 A------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + K+LA + D E + L G D +F + +LL QGQF FL A+ K+R+ ++ Sbjct: 120 PNVGKTGEEKLLAANITDVSERISQLIGFDADQFRQVVLLPQGQFQRFLLAEVKDRSAIM 179 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 + + TE Y +I ++ ++ + + + +A G+ AS L Sbjct: 180 QRIFRTERYQRIEEVLTKEAQQLERTAQAERERAEGIL------RAEGMASSDELRTRLS 233 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA-ALSLAQPARNL 292 +L +++ + L + + + A A QQ L+ + AQ L A+ RN Sbjct: 234 ELSEEIRRQDEILREHEKVQKSARRAREEGAAAQQKLSARDAAQSDLEKKREQAESVRNF 293 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ--QSLNT 350 R R L R IE +NT A ++ + AA ++ + + + Sbjct: 294 RVRLSRAQRAQPVLYKERSYIEALNTERTRREAYASAAKDCAAAKTEHDASIECLKKVEA 353 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 EH + + + ++ LR + + E+K + AA LT Sbjct: 354 HADEHTQNVEQLRRMRDYAPLANRYQECTSALRDLRVRAAEGEEKYESGAAEIERLT--- 410 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVA---IQNVTQEQTQRNAALNEMR 467 A ++ E+R ++ + ++K+L Q A I+ + T + + + Sbjct: 411 --EAQKKYEEERARLHQILVGSEIVQQEKKQLEHCQQASDQIRELEDALTSARTRVKKSQ 468 Query: 468 QRYKEKTQQLADVKTICEQEARIKTL---EAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 ++ + + L+DV+T + + + LQA PCP+CGS +HP+ + Sbjct: 469 KKLQTAEEALSDVRTTQRRLRTLYDMGSAARLAQTLQADTPCPVCGSLAHPSPAVHAEEI 528 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 P E+ + T +L T Q ++++ L Q+ ++ + + Sbjct: 529 PSA---------QEMDVCMQHVETAEKELQKCTAQAEQEKAACLRLEQELLHEQKRIKEL 579 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR-HELQGQIAAHNQQIIQYQQQIEQRQ 643 A + ++ + E E QLR L+ A QQ+ ++Q ++++ Sbjct: 580 LAD--------ETMEAFCVRVAERENQLRRAQNACKALEKTYAEEQQQLFARKEQQKEQE 631 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 LL L +++ E L ++A++ + L + Sbjct: 632 ALLQKNRNLIGLHEGEKNALERQLPEEYRDAEA-----------------VREAAALLER 674 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + ++C S + Q+ A + Q AQ + A A+ F Sbjct: 675 EVKTAETARAEAEKREKAAAQKCARTESAKAAAQRVLKEAEEVRQAAQEAYTAAYCAADF 734 Query: 764 DDQQAFLAALM-DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 ++ + A++ D LE++++ + Q A + P D ALT Sbjct: 735 LTEEEYHHAIVGDWAKSDYLEKVRERITAYDTAFQAAEELVKAAKAAAEGLCPPDMEALT 794 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 E+I + Q + + + + ++ ++ D ++ A ++ G Sbjct: 795 EA-ERIADQRVQDSARAQGVRMERWALYTRMTKEMDALERAG------AARDKRYRVIGK 847 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE------ALE 933 L ++ +K + F+ + L +++ AN++L + GRY LE Sbjct: 848 LANVAAAKPPYQIHFQTYVLRSILSDVIDAANERLMMMSRGRYRFIHGEGGQKKKWWGLE 907 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 ++V D + R RTLSGGE+FL SL+LAL LSD+V + +D +F+DEGFG+LD Sbjct: 908 IDVFDEYTG-FPRLARTLSGGETFLASLSLALGLSDVVQHYAGGMHLDMIFIDEGFGSLD 966 Query: 991 SETLDTALDALDALN-ASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 SETLD A+ AL + G+ +G+ISH+E ++ RIPV ++V + Y+ + Sbjct: 967 SETLDVAIRALLDVQREGGRLVGIISHIEELRARIPVHLEVCRGQNGSYASFTQS 1021 >UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEB9_9ACTO Length = 1024 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 227/1100 (20%), Positives = 399/1100 (36%), Gaps = 142/1100 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LR+ + G+ +DF+ F +GLF + GPTGAGK+TL+DAI ALY + R Sbjct: 1 MKIRWLRIVGIGPFAGKHTVDFS--AFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVAR 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRVELA 117 + S+ + D+ A++ FEV YR + A + N + + + Sbjct: 59 TKDASKDRLRSNHISDSDPSEADLVFEVGTGIYRVTRTPAYTPAGKKSQRNSKSTLMRVV 118 Query: 118 RCADG-------KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 D + +A +D + GLD +F ++++L QG+F+ FLNA R Sbjct: 119 EDPDAPDGWRTVEPIASGPRDVGSEIPAIVGLDKDQFLQTIVLPQGKFSQFLNATSDARE 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 ++L ++ T+IY + + + S++ +E+ + A G E+V+SL A+ Sbjct: 179 QILRDIFDTQIYVDFTKALVDAAASSKRGIEERRVAAIG----AFERVRSLDAAFAENGT 234 Query: 231 EEKQLITAQQQEQQSLNWLT------------RQDELQQEASRRQQALQQALAEEEKAQP 278 E+ + + + + L +D ++ Q L A A+ Sbjct: 235 EDGSAADGRAADAKEADQLDAGAEDSSAVTRWAEDACERAREAHAQTLHLAEVATATARE 294 Query: 279 QLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS 338 ALS + + R++ A L I R A AA+ S Sbjct: 295 ASRALSEGRALAEAQAEHARLSATLAELTSSEGAIASDRERAGQARRALAVAPLDAAEAS 354 Query: 339 AELQ-----QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAE 393 A + Q +L+ L + D + P + R+ + + L A Sbjct: 355 ARARLEAAGDQVAALSPALGDEDSIDSTSLTPEAVATLGKRAQDLRDEATRTRGSLEEAL 414 Query: 394 QKLNALAAITLTLTA--DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQN 451 +L + + + + ALA+ A R+ L Q + + + Sbjct: 415 AVEGSLPEVRTHIDSLRSQHEQALARIASIEAERETLPLRIEQASEALRLMRADADTLPE 474 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEAR----------------IKTLEA 495 N L+ Q ++ L + E ++ A Sbjct: 475 AASALRALNERLDASMQADLLRSALLGASDELREATVAAKLANAAAADGHDLWIAQSASA 534 Query: 496 QRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDA 555 +L+ PCP+CGST+HP E Q +LD Sbjct: 535 LALELEEDIPCPVCGSTAHPNPAPAADGEITREQ--------------------VAELDQ 574 Query: 556 ITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL 615 + + +AQ+ QD Q V + P + E + L+ Sbjct: 575 ARDRAEAALRDAQAGHQDLVRRIAQLNEVAGA------------PTPTLETERDGAAELV 622 Query: 616 SQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQ 675 ++ L QI + Q + +++ L + T A Sbjct: 623 AKLEALSPQITEIEAALAQERARLDGLTDSLASARE-----------------TAASLAS 665 Query: 676 SWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT 735 + Q+R++ L A + R++ + L+ ++ + Sbjct: 666 TLQERKSALAAAEARVET---------------ERADYTSLDARATALDERARRAAALAG 710 Query: 736 LQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 A +L +AQ AL+ + ++ L+ + LE E Sbjct: 711 ACADWDNARAALAQAQRSLADALEEQGLE-ADSWRTLLLPLPQVEALEARVAAHEKALFA 769 Query: 796 AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ 855 A + T A A +E + + + + + G + Q Q Sbjct: 770 AHEALASERLTRA---------ASAPAPDLEALTETARKAEEDAAMAARASGILEQHCAQ 820 Query: 856 DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHL 910 R + ++ + + +Q L + + + + L+ ++ Sbjct: 821 LDAARASLEHALEALGRAREQAGPIHRLADIAAASGPENLASTPLSAWVLIARLEEVLAA 880 Query: 911 ANQQLTRL-HGRYLLQRKASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLA 962 AN +L + GRY L + L + +VD DA+R RTLSGGE+F SLA Sbjct: 881 ANPRLAAISSGRYELVSVPDDGTASRKSGLGLAIVDHDT-DALRSPRTLSGGETFYTSLA 939 Query: 963 LALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 LAL L+D+VS + ++F+DEGFG+LDS TL + L AL +G+T+GVISHVE Sbjct: 940 LALGLADVVSAEAGGVELRTMFIDEGFGSLDSHTLSLVMAQLQALRCAGRTVGVISHVEE 999 Query: 1020 MKERIPVQIKVKKINGLGYS 1039 M +I QI+V+ + G + Sbjct: 1000 MATQIADQIQVRPLPEGGST 1019 >UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. BH72 RepID=A1K1W2_AZOSB Length = 1023 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 244/1076 (22%), Positives = 406/1076 (37%), Gaps = 86/1076 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ G +IDFT LF I+GPTGAGKT++LD I ALY +T Sbjct: 1 MKPLKLSLQAFGPFAGREEIDFT--LLPEGALFLISGPTGAGKTSILDGITYALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQN------RARNQPDGNLQV-PR 113 ++ E EF + YR RA DG ++V R Sbjct: 59 GERSAREMRSHHADAALLTEVEFEFALGARRYRVRRVPEQERAAQRATKSGDGLVKVLAR 118 Query: 114 VELARCADGKI----LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 EL R D + LA K + L G +F + +LL QGQF L A ER Sbjct: 119 AELHRLDDDGVTWLPLAHKTTEVTSELTALLGCQAEQFRQVVLLPQGQFRKLLTASSGER 178 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEK--------LQAQASGVTLLTPEQVQSL 221 ++LE L GT Y ++ + ++ ++ + ++ LQ A+ Q ++L Sbjct: 179 EKILETLFGTAAYKRLQDALKQEAQALQKAADETRLRRDTLLQQAAAESVEGLRGQAEAL 238 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 A L L EE +A Q +L E AL A + Sbjct: 239 DAELTRLAGEESAARSADTAAQAALQQGRALAAQFAEQHAAGAALAAVEARAGEIAALRL 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + A+ A + P E A LA RQ+ E R+ + A R A Sbjct: 299 REAAARRALQVVPADEACAGAGRQLALARQRAAEAGERVATAAAAMQQARAGLEADKARA 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q+ + LQ Q A R ++++ + Q A + AA Sbjct: 359 PQRDTAQRELLQLEALAAQVEQLAAAERELAARRSQAAAAEQALAQARHAAAEAEQGRAA 418 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + + + A A+ R + Q + +++ A + ++ Sbjct: 419 LVVRVDQLAPRAAEAEALALRVAQAEQREADAQRLAARRKALAEATAAEAQARQAMDAAR 478 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 A + + ++ L +EA+ L L G PCP+CGS HP + Sbjct: 479 AALDAARDAQQALDGL-------WREAQAAILARH---LHDGAPCPVCGSAVHPGPATHA 528 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P + R A + + + Q A+ + Sbjct: 529 GELPSESALREAAARSR----------------EAEQGFEARRAAFDRAAQARTAVEAEV 572 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A++ +L A D+ + L+ +L+ ++A Q + ++ Sbjct: 573 GALSGALR-------------TAGDDGVQADMLVETAADLRQRLAVARQAGAELTAARDR 619 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 Q L A +S + + + R+ + A L L+T Sbjct: 620 LQALEQAQRNALAAQEQAATAAQSAASALHGAERVVEARREAVPAALRPAGALAAALKTA 679 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + A H+Q+ TL Q + A +L++AQA F AL A+ Sbjct: 680 RSALDTLLAASQQAQAAHAGAEAALAAAHAQRDTLAQAETEQAAALEQAQAVFARALAAA 739 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 FDD+ + AA + + L + + A+ + + + +A Sbjct: 740 AFDDEAGYRAARLAAADIDHLAASLRQHDEDAAAARERLARADQAVA----------GRT 789 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + +++ + ++R L++ L + A + + G Sbjct: 790 PPQLAELETSAQAARAAIDAVLARSADLRGALEKTRHTLALLDELAARNADIEARYRITG 849 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EA 931 L ++ G F+++ LD+++ A+ +L + GRYLLQR+ Sbjct: 850 ELAAVANGDNGRNLTFQRYVLAALLDDVLRAASLRLKAMSRGRYLLQRREEVADARRAAG 909 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L++EV+D + A R TLSGGE F+ SL+LAL LSD+V + ++D+LF+DEGFG+ Sbjct: 910 LDLEVLDDYTGRA-RPVATLSGGEGFMASLSLALGLSDVVQAYAGGVQLDTLFIDEGFGS 968 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 LD E+LD A+ L L G+ +GVISHVE MK++I V I+V + G+ S++ Sbjct: 969 LDPESLDMAMRTLIDLQRQGRMVGVISHVEEMKQQIDVAIEV--VQGVRGSRVRVR 1022 >UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacteraceae RepID=B0K215_THEPX Length = 1180 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 225/1199 (18%), Positives = 471/1199 (39%), Gaps = 177/1199 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E IDF E GLF I GPTG+GK+T++DAI L++Y + PR Sbjct: 4 MRPLKLKIAGLNSFVEEQIIDF--ELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPR 61 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK----GEAYRAFWSQNRARNQPDGNLQVPRVEL 116 + D + + +FE+ + Y + R + R+ Sbjct: 62 ------NSKDFINTQSTSMSLTYQFEIGVDGARKRYIVERNVKRDAKSGGYKTTLARLRE 115 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + ++LA+K ++ + L GL FTRS++L QG+F+ FL KER ++LE + Sbjct: 116 IGESGERVLAEKDREVQQKIVDLIGLTAEDFTRSVVLPQGKFSEFLKLTGKERRDMLERI 175 Query: 177 TGTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ-----------------V 218 G E YG ++ + + + L ++ A+ S +T E + Sbjct: 176 FGLEKYGSKLLVRIRDVKREKSNLLNEVNAKLSQHEGVTKEALEDLKKKFEILKEEEKTL 235 Query: 219 QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR---------------- 262 + L ++ K + QQ+ Q L+ D+ +E + Sbjct: 236 KEQKDKLDKEREKLKGIWEKQQELNQFLHKKEVLDQQLKEIEDKKEKLKKAEKALSVKPY 295 Query: 263 -----------------------------------QQALQQALAEEEKAQPQL-AALSLA 286 ++ + +L E+E+ P + Sbjct: 296 IDSLVETEKKLILNQKDVEKYSKELEEAEKLLEKVEKEYEASLKEKEEKIPLIIEKEERL 355 Query: 287 QPARNLRPHWERIAEHSAAL----AHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 + A LR ++I L +++QI+ + +++ + ++ + Sbjct: 356 KRAFKLRDEIKKINSEREKLVKEYKDLKKQIDGIEREIKALSDSIDIAKRQLGEKEKRIN 415 Query: 343 QQQQSLNTWLQEHDRF---RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 + + N + F +++ + + + +E + + Q+ + + L Sbjct: 416 EIKVDSNKREKIFAAFEIQKEFERADKEKKEKEKRILELKELIGKQQKDIEKIDNLLKRK 475 Query: 400 AAITLTLTADEVATALAQ---HAEQRPLRQHLVALHGQIVPQQKRLAQLQVA---IQNVT 453 + + + + + + L++ L +I+ +++ A ++ + Sbjct: 476 EKEIQEVDNNIKKLEMQKPPTNEDLLDLQKSLERKRVEILELKEKEKLKNEAENNLKEIL 535 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 + + + N + E+ ++ K K L +VK E+ + L+ G PCP+CGS Sbjct: 536 KIKEEINNEIKEIEEKLKNKNNSLEEVKKDIEELVKNNMAGELAEGLKEGVPCPVCGSIH 595 Query: 514 HPAVE------------------------------------------------AYQALEP 525 H + Y L Sbjct: 596 HVRLAQKVEEDLIKEKQEIKANLEKDIMDYQSKLFKLKGELSGIEVKEEMYKKEYDKLWD 655 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + LL LE E+ K+ + + +L+ K + E + L++++ +L + + Sbjct: 656 ILKDINLLKLEEELNKMESDFIQWKEKLEKWNKSKEGLETLIKKLKEEKASLDLEHTRLK 715 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 +N + L + + L+A +L + + I+ +++ + Q+ E+ + Sbjct: 716 EGINKDISLLKEFESSLEAISITYSELEGQLRISREELGISDFKEKVEEINQK-EREIEG 774 Query: 646 LLTTLTGYALTLPQEDEEESWLATR---------------QQEAQSWQQRQNELTALQNR 690 L + + T+ + ++ L+ ++++++ ++RQ E +L Sbjct: 775 LRNEIENFKNTIEELTNKKETLSNNLNALSIRKGQIEEIGKEKSKNLRERQQEFDSLSEG 834 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + + L+ + + E E+V+ E + + + S++ + + L ++ Sbjct: 835 -RDIEEYLKEIQYNKEKITKMESVLKETLEKARKDKQNIESKKISACKSRDLLNNMFREQ 893 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 + + AL F D++ L L+D + + ++E+ +N EN+ + + E L Sbjct: 894 SEKLENALLEKGFKDKKEALEYLLDSENIKKIEEEIKNFENEYVSVNKSIDRLMEILKGQ 953 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + + + Q+++ + Q L E G + + +N Q+ + +Q Sbjct: 954 KINEEE--------WNQLEESIKGLEQVLNEKRKEIGATEKAISDMQENLQKVEEFTKQK 1005 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS 929 ++ + V+ L++L +G+KF F L + A+++L + GRY L+ + Sbjct: 1006 KELERVVDILNELDNLF---QGNKFVDFIAARQLKYITFFASKRLKEISRGRYALEIDSD 1062 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFG 987 + D + R TLSGGE+FL SL+LALALS + + ++ FLDEGFG Sbjct: 1063 NN--FVMRDDFNGGVRRSVDTLSGGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFG 1120 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG-YSKLESTF 1045 +LD+E LD + +L+ L +G+ISHV+ +K R+PV++ V G SK+ + Sbjct: 1121 SLDAELLDIVMTSLERLKKDKMVVGIISHVDELKGRVPVKLIVTPPAVSGEGSKVRIEY 1179 >UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=B8HAV6_ARTCA Length = 1025 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 227/1073 (21%), Positives = 401/1073 (37%), Gaps = 85/1073 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LR+ G +DF R + +GLF + GPTGAGKT++LDAIC ALY P Sbjct: 1 MRIHHLRISGFGPFAGTEDVDFDR--LSGHGLFLLNGPTGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ----NRARNQPDGNLQVPRVEL 116 + + E +EF +G + S AR + Q + L Sbjct: 59 ARQDGKRLRSDHAEPSQEPAVNLEFSAQGRRFEVTRSPAWDKPSARGRNGFTTQQAKTLL 118 Query: 117 ARCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 DG + + + L G+D +FTR ++L QG FAAFL +K +R ELL+ Sbjct: 119 RERVDGTWVEKSARNDEAGAEITALLGMDRDQFTRVVMLPQGDFAAFLRSKAADRLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 +L GT+ + + + + +AR + L Q +T + SL + +K Sbjct: 179 KLFGTQRFEALEQELSREALAARESVAALSGQLELLTARAESEAASLELAEDSAPAADKA 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + + L ++A A+ EE + + L A+ RN Sbjct: 239 AERLEWLQHAVAQRLEALRGFAEDAETAAAERTLAVDEESGRRERRQRLEAAEARRNAVS 298 Query: 295 HWE-RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 R+ E A LA R+ E + +L++ A + + + L + + + + Sbjct: 299 DAAPRLRELEARLARHRKA-EVLVGQLKNVDGAAAKVASASRAAESALTFLRLAADEDPE 357 Query: 354 EH--DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + + S S + L + + L E +L L Sbjct: 358 LAPFELVDAAGTGSSAASLPESVMASAADELGRLRSLLAVVEARLPD--EDRLQALRKRH 415 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA------LNE 465 + AE L ++ +++ L ++ + R+ L + Sbjct: 416 TDLGRKQAELEAAEAKLGIRSAALLEEREGLEAGLAPLELLAGTAALRSKEAASAEELLD 475 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + +R+ VK C+ AR + L A++ L + +H A E L+ Sbjct: 476 VVRRHASAVAARNAVKLRCD-AARERQLAAKQQWLDLREE-----RLTHAAAELAAQLQA 529 Query: 526 GVNQSRLLALEN-EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 G + E+ G +G L DA + + + + Q + Sbjct: 530 GDPCPVCGSAEHPAPTAGGNQGPGLAQAEDAAHGAYEAADAALARVGAELANAEQSVAVL 589 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 T + E L + + + + ++E Sbjct: 590 AGQGGDTPE---------------EEALAAAGMARTAAAEAERAVAGLSEVRGKLEALDV 634 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + A + +S LA ++A + + L+ L+ L L +L Sbjct: 635 GIAEAAAAKAEIDAGLAQAKSSLAEVSEQATALDE---ALSGLRAGRPSLARRLRSL--- 688 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 E +A+ + Q +A A+ Q + AL A+ F Sbjct: 689 -------------------EGAVAVLDKAVAAQAALTVAQSQADDAREQLELALPAAGFA 729 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 + L+D L+ + +++ + + L TAE L + + + Sbjct: 730 TADEARSQLLDSAEADGLQAEVRAGQDEAARVRELF--TAEDLVRAAEEKAGGFDPSGER 787 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 + ++ E A+ ++ R+ + G + L A + L ++ L Sbjct: 788 LAGLESEAAEARERARQADLAAGMAARCLASLAAISRDYAALAGSALGPAERARMLAGLA 847 Query: 885 SLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEAL 932 + + +R + L+ + A+++L + GRYLLQ R A L Sbjct: 848 DAAAGRGDNTYRMSLNSYVLAARLEQVAIAASERLVAMSDGRYLLQHTDAKAARGAKSGL 907 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 +EVVD W RDT TLSGGESF+ SL+LAL L+D+V S I++LF+DEGFG+L Sbjct: 908 GLEVVDQWTG-HRRDTSTLSGGESFMASLSLALGLADVVQQESGGVEIETLFVDEGFGSL 966 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 D ++L+ +DAL+ L G+ +G++SHV MK+RI Q++V K ++ Sbjct: 967 DEQSLEQVMDALEGLRDGGRVVGLVSHVGEMKQRIGTQLQVLKGRTGSTLRIS 1019 >UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetobacter radioresistens RepID=C6RPI9_ACIRA Length = 1200 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 303/1200 (25%), Positives = 493/1200 (41%), Gaps = 161/1200 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI+ L+L+NL SL GE +I+F +P GL AITG TGAGK+TLLDA+CLAL+++ PR Sbjct: 1 MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60 Query: 61 LSNVSQSQND-------------LMTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPD 106 L D ++ R TA +E+EF + + Y A W RAR + Sbjct: 61 LKTHEGKLKDVSGQDVQIDSTLNILRRGTAHAYSELEFIAQNQKRYIARWELKRARGHAE 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ + L DG +L DK K+ + L GL + +FTR++LL+Q + AFL AK Sbjct: 121 GKLQAVQRALVCVTDGNMLTDKAKECDKQVLELIGLSFEQFTRAVLLAQSEVGAFLKAKD 180 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ERA+LLE LT + I+ + FE+ K R + EKL V LL+ EQ+ L + Sbjct: 181 NERADLLEYLTNSNIFSLVGKAAFERTKMVRVQREKLNELIGHVELLSTEQMAQLEDQYK 240 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 + +QL +Q + L W D L + +Q+ Q L +K Q L Sbjct: 241 ARQQQVQQLEQHRQILRNELQWHKSHDLLYTQIQAKQEFYQVQLDANQKLGEQRQRLQQL 300 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + ++RP + L ++ +QI + Q + + ++ ++ Sbjct: 301 EQFASIRPILLQQKRCEQQLQNLEKQISQHQQLFQQVCEQYQAAQKSCQAARTAVENEKL 360 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQ------------------------------- 375 N ++ +Q+ ++ +Q++Q Sbjct: 361 RQNQLAPYLNQAKQFLDQRKLIESQYTQVRNKLKEKTAEQQQQLEQLQQAQQQYQQLENI 420 Query: 376 ---------------------TSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + +HL+ + Q A + I L + D + Sbjct: 421 QQQLQQQLAQSQQLCGFDSEPQASLQHLKAYIAQAQQASELYTQDQIIHLQIQQDSIEQQ 480 Query: 415 L----AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ------EQTQRNAALN 464 L + L Q L L+ Q Q +R+ Q + + + E + ++ Sbjct: 481 LHKLVQHAGDANQLEQKLRDLYQQREQQLERIYQFEQLQHQLERWQIHYIEHQSLDQNIH 540 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKT----------------LEAQRAQLQAGQPCPL 508 +++ +E + + ++ E + + + +E RA LQ +PC + Sbjct: 541 QLKSEIQELHNAMLEQQSAYEHDKKERELLQKQLQQQRLLFSENIEQLRAALQPDEPCMV 600 Query: 509 CGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT---LRGQLDAITKQLQRDEN 565 CGS HP E LE + + +N ++K E R Q L + Sbjct: 601 CGSQQHPYREQQHLLEKSLLAIQEQQEKNYLQKEQEAQNQWLAARQQYLKQETVLSHLQQ 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHER-QLRLLSQRHELQGQ 624 + Q + Q L QQ Q + + L + L E ++ QL++ Q + Sbjct: 661 QQQYSLEQIQQLQQQLQHKYSFSGLELLWEQPPEQLLLKLGELQQVQLKVREQLDFNITE 720 Query: 625 IAAHNQQIIQYQQQIE---------QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQ 675 Q + +Q+E Q+ Q L T + + D ++ L Q Q Sbjct: 721 TQKTQSQYNELVRQLEKLRAQCIRAQQLQQLATPILKKLPSSQHSDWHDNSLQEAQHIYQ 780 Query: 676 SWQQRQNELTAL------------------------QNRIQQLTPILETLPQS-----DE 706 +Q R +L L +I QL LE L Q + Sbjct: 781 VFQNRLLQLEQLNTHKGSVEQLNLKLQPQQLQYQYLNTQIVQLEQELEQLKQQGLDNVTQ 840 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ----------------KA 750 + V + + Q L Q L+Q + Q + +A Sbjct: 841 VKELTLKVAGQTYEQAQHWLDDLTQQLSILEQSCLEKQQYFEGLQQNYQQQQSKISQFQA 900 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ- 809 Q +++ Q +L + + +E L + ++ + L+ L++ Sbjct: 901 TRQHVQQEYTNIYAQVQHWLNDH-PDYSPELIEFLVLQDATEEQRIRQLIQANDRGLSEA 959 Query: 810 -------HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 +Q EQ+Q L +L + ++R +L+ N + Sbjct: 960 KTALNTLQEQFEQHLATKPAHEFEQLQNLLENLEIQLEHTYQERDQLRTKLEIQQHNLHK 1019 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 QQ +QI Q+ Q+ W ++ LIGS +G +F+K AQ LD LV ANQQL L RY Sbjct: 1020 QQQFQKQIVQVQQEEYRWSRISELIGSADGARFKKLAQEHHLDILVEYANQQLQPLAPRY 1079 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 LQR ++L + ++D VR +LSGGE+FLVSLALALA++++ S +I+SLF+ Sbjct: 1080 QLQR-IEDSLGLAIIDHHMNGEVRPVLSLSGGETFLVSLALALAIANMASGSMKIESLFI 1138 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLD +L +DALD L G+ + +ISHV+ M ERIP+QI+V K G G S+++ Sbjct: 1139 DEGFGTLDPASLHVVMDALDRLQGQGRKVTLISHVQEMHERIPIQIQV-KAVGSGASRIQ 1197 >UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLJ3_9GAMM Length = 1022 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 250/1066 (23%), Positives = 430/1066 (40%), Gaps = 87/1066 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+++ + I+FT + LF I G TGAGKTTLLDAI ALY ET Sbjct: 1 MKPLVLKMQAFGPFPTQQSINFT--LLGEHPLFLINGATGAGKTTLLDAISFALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV------ 114 + + D E F V + YR + GN +V R Sbjct: 59 QDRIGKQMRCDHAADDCATEVEFIFAVGEKTYRVMRQPTQHILGQRGNSKVERRTTASLY 118 Query: 115 ---------ELARCADGKILAD-KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +L D + L KV + + TL GL +F + ++L QG+F LNA Sbjct: 119 QLQGEWSNDQLPNAMDWQPLETRKVTEVNKHIETLLGLRAEQFRQVVVLPQGKFRELLNA 178 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-EQVQSLTA 223 ER +L +L T+ + + + +Q + E+L+ Q + + + E + L Sbjct: 179 DANERETILSQLFQTQRFKRYEELFKQQASELKKSFEQLEQQKAHILDGSECEDLTQLEQ 238 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L + + T Q QQ +N Q + Q + + + LQ A +++ + + A + Sbjct: 239 HIADLKPQLEAKQTVLNQLQQQINDTDYQLKQQHTRNAKYKDLQHAKHQQDALKAKQADI 298 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q R+ + ++ Q + + AK Q Sbjct: 299 DYKQQQIKAAQAAIRLLPTYNEWQQNEKHVKTS----QEKQLQLETRQQQQAKTLKVAQT 354 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 Q T L+++ R Q + + Q Q +L E++ L A Sbjct: 355 SLQEAKTKLEQNHSLRTTLQRLEELLPTVEQLEGLTKQVEQHQSKLALQEKEGKQLRASY 414 Query: 404 --LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + L + + Q + L + Q+K+L + Q + T + + Sbjct: 415 DAVQLDIKRLRSEQLQVQSKIDELPELEVRVQALSEQRKQLLKKQQLTEQATTVKNDQAK 474 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + +R +K + + EQ +QL+ QPCP+CGS HPA Sbjct: 475 LQHALEKRLDDKQKAYNRANEL-EQRWLASQAPLLASQLKPQQPCPVCGSKQHPA----- 528 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P + + L ++E++ L + + L Q T Sbjct: 529 ---PAQSDTTALVSQHELEHARATYRAAEQAFYDEQTALTKANEHERQLNQQLSEFTDLS 585 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 +A+ + L +E + LL++R LQ ++ QQ + + Q+EQ Sbjct: 586 EALIEQQEVQLN------------EERRTRAELLTRRQTLQSKLDQAEQQRSELEHQLEQ 633 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + +A + Q WQQ + ++ RI Q+ L L Sbjct: 634 CRAKYTEVKAQHARVNADLEHLN----------QRWQQSDINVAEVKPRIDQIKQQLRQL 683 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + E +Q EQ A H+Q + +++ AQ+L+ A+ + L +S Sbjct: 684 EKQFEQAQ-------HAMQQQSEQYHATHTQLKAEVEENKRLAQALEAAEKAWQAQLASS 736 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F F +A + E LEQL + ++ L + AE +P D L Sbjct: 737 PFATYNEFQSAHVSEPE---LEQLNSAVAEHNQRMVELRSMIAELQRYVDDIQPADTEQL 793 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 T+ +E+++++ + + ++ L + Q+ + L Q ++ + + G Sbjct: 794 TLRLEKLRKDFESEQTQFNQQQSA-------LFNNEKAAQRLRQLATQNKELEAKYANIG 846 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEA 931 L +L + + +F + LD+++ +A+Q L ++ H RYLL R +++ Sbjct: 847 TLANLTNGQNDQRLSLHRFILSVLLDDILIVASQHLAQMTHHRYLLVRENEVNDARSASG 906 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L + V D + R T+TLSGGESF +LALAL LS++V S ++D LF+DEGFG+ Sbjct: 907 LNLAVTDAYTG-IQRSTKTLSGGESFQAALALALGLSEVVQQYSGGIKLDMLFVDEGFGS 965 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 LD + LD A+D L L ASG+++G+ISHV +KERI ++I V K Sbjct: 966 LDEQALDAAIDVLANLRASGRSVGIISHVRELKERIDMRIDVHKGQ 1011 >UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of recBC) n=15 Tax=Acinetobacter RepID=B0VTC7_ACIBS Length = 1198 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 288/1197 (24%), Positives = 499/1197 (41%), Gaps = 157/1197 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+R+KNL SL E IDF P A GL AI G TGAGK+T+LDA+CLAL++ PR Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 61 LSNVSQSQNDL-------------MTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPD 106 L + D+ + R T AE+ F + + Y A W RAR P+ Sbjct: 61 LKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPN 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ + L DG +LADK K E +T L + +FTR++LL+Q + AFL A+ Sbjct: 121 GKLQSVQRHLKCLTDGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARN 180 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ER ELLE LT + I+ +I + F + + ++L+ + +L+ E++ + T Q Sbjct: 181 SERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQ 240 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL- 285 +QL + + W R+ +L+QE +QQ Q ++ + L Sbjct: 241 QAEQNYQQLEQQKHVLDKQQQWFERKAKLEQEVQAKQQLFQTQQNHHQQLASEREQLKRL 300 Query: 286 -------------AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 AQ + L+ +I + + Q E + Q Sbjct: 301 EVFSEIRPQVFQQAQNLQTLQQLEPQIQQAQTKFNELVQIFETGQKQYQLAEQQLKQTID 360 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA---------------------- 370 + L Q +QS+ D +++ + Sbjct: 361 FEQQHQHTLNQVRQSIQERAFIADEYKKCKEKRHVLEQKLSPLQQQQNAVQQQIAQLEQN 420 Query: 371 --------------------------QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 Q Q + + + + T A QKL+ + Sbjct: 421 KIHLQQQLIQTQQYAVLDKGLSAHLHQLGQFIQNYQAIEEQLGNPTFARQKLSEAKSELE 480 Query: 405 TLTA-----DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 LTA +++ L Q + + + V I + K +L +Q T++ TQ Sbjct: 481 QLTASLGTVEQIELKLEQQRKDKDQKLAQVTQLDLIQQKIKIYHELYAELQQFTEKHTQA 540 Query: 460 NAALNEMR-------QRYKEKTQQLADVKTICEQEA--RIKTLEAQRAQLQAGQPCPLCG 510 +A +++ Q Y+ + ++ I +Q+ + +E RA L+ G+ C +CG Sbjct: 541 SAQEEQLKTVCQLAEQDYQTAKNEREKLQHILQQQRLLHTENIEQLRANLKEGEACLVCG 600 Query: 511 STSHP------------------------AVEAYQALEPGVNQSRLLALENEVKKLGEEG 546 ST HP A+E + Q L E++++ + Sbjct: 601 STHHPYRIDDSAVSKALFDLQQQQEQQAVALEQTKFNVWQTQQHALTQCRAELEQVQKYL 660 Query: 547 ATLRGQLDAITKQLQRDENEAQ---SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWL- 602 A L+ + + ++L++ N Q L Q + + Q + + + D L Sbjct: 661 AQLQAKQTNLQQELEQAFNLNQLHIELNQAPEQILQTLNELRQATQTAISLFDSENLRLT 720 Query: 603 DAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL--LTTLTGYALTLPQE 660 A +H + ++ + + L QQ+ + + + +Q + T Sbjct: 721 QAIKQHNQLIQTIQRNESLLNTAQQWQQQVQHIVECLSETEQHAWQQASSQTAKQTWAIL 780 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 D L ++Q +Q ++Q+Q EL L ++Q+T ++ + Q+ + + E Sbjct: 781 DARAKQLEQQEQLSQRFEQQQQELKMLTASLEQMTKQIDEIDQNLQEITLKGQQNNEKAV 840 Query: 721 QVHEQ------------CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 + +Q + +++Q Q A Q ++ + F+ QA Q Sbjct: 841 SLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTRQHFEQQKQALDQLKHQH 900 Query: 769 FLAALMDEQTLTQLEQL----------------------KQNLENQRRQAQTLVTQTAET 806 +Q Q++ +Q++ N+ A+ L+++ + Sbjct: 901 QHTEQHQQQIDGQIQNWLKAHTDFQASDLTALIQINSAQEQDIRNRLNHAERLLSEVSSA 960 Query: 807 LAQHQQHRPDD-GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 L Q+ + + E++ + KL+ + ++ +L+ N +QQ Sbjct: 961 LKTMQEQLSEHLQTQPDIEYEKLFTLIQDNIAKLKAQLEVRDGLKLKLELHQQNLAKQQK 1020 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ 925 +QI + Q+ W ++ LIG +G +FR +AQ LD LV ANQQL L RY L+ Sbjct: 1021 YAEQIQNIQQEEHRWSRISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLK 1080 Query: 926 RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEG 985 R ++L + ++D R +LSGGESFL +LAL+LA++++ S +I+SLF+DEG Sbjct: 1081 R-LDQSLSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEG 1139 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 FGTLD+ +L ++ALD L G+ + +ISH++ M ERIPVQI+VK + G G S +E Sbjct: 1140 FGTLDASSLHMVMNALDQLQNQGRQVILISHIQEMHERIPVQIQVKPL-GAGASTIE 1195 >UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YU05_9FLAO Length = 1011 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 196/1043 (18%), Positives = 405/1043 (38%), Gaps = 42/1043 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + IDF GLF I G G+GK+++L+AI ALY ET R Sbjct: 1 MIPVQLTIEGLYSYRERQTIDFRN--LTEAGLFGIFGAVGSGKSSVLEAISFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L+ + ++M + E +F + + +RA R + + ++ V Sbjct: 59 LNMRDKRAYNMMNLKSNSSYIEFDFVNYENKLFRATRDFKRNSKKFE-EVKPNAVTFYEN 117 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 DGK + + + + GL Y F R++++ QGQF FL ER +++E+ Sbjct: 118 IDGKWIPLEHSNA----EAIIGLSYSNFKRTIIIPQGQFKEFLELGAAERTNMMKEIFNL 173 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + + + V + R+EL++L+ Q G + E+++ L + + Sbjct: 174 QKF-DLQNNVSALNVKNRSELDQLEGQLKGFEDINEEKIKIQKEELTEEQKKLSEANKKL 232 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL-RPHWER 298 ++ Q+ L + ++ + E+ + A L + P Sbjct: 233 EKISQTYQQLKNLKSDFESLQLNKEKFSKLSEEKPQMDALEAKAELYDHIFRIFNPLIIE 292 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + S +A R + E+ Q T I+ A + + + + + Sbjct: 293 KNKLSKEIADKRNEKEQQIKIWQETEKAFTVIKKKLAALEPQF-KALEQSKIQENDMNLI 351 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 Q + + E +++ + ++ ++ LA TL ++ +AL Sbjct: 352 VQILKFSEEIKTLNERTRKGSEKVKEVDLNKENIQKTIDELAVQIKTLKEQKLDSALLSE 411 Query: 419 AEQRPLRQH-LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 ++Q L + Q V + + + I + ++ R R + + Sbjct: 412 VGNWFIQQKNLKKIQQQQVEKVVQQQKQISEIGEELKPFGYHENYKDDFRIRKETLEAKR 471 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 ++ + K L A+L G+ CPLCGS HP + + + Sbjct: 472 KELSLKLDHLKIQKELSRFAAELHDGENCPLCGSKEHPHIVEFHDVNI------------ 519 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E++++ E T+ +L A+ KQ E + E+ LT + + + + Sbjct: 520 ELQEIQENITTVEQELTAVQKQESEIEKILDRKKIFEEQLTSEQKTLLRIQKDIEHHILS 579 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + D E + S L+ +I + I ++ +E+ + L + Sbjct: 580 FTWKQFSHDLEEEFEKKRSDSFTLEKKIEETERNIALEREALEKENKTLEKYKSALEAFR 639 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 +E ++ + + + Q ++ + L QS++ E Sbjct: 640 LEEVSKQEQINISRSGLKILDWNLYA----QKTTSEIEDAYQKLVQSNKETEENYNKASE 695 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 + + + + ++Q + + ++ AL F + + L+ E Sbjct: 696 QEKILSPKLTEQKTIVSQTEKQITELEKEISANESAIAKALADQNFTEFKEVENILLQEI 755 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + + QN + + + + + L LA +Q+L Q Sbjct: 756 NIQVVRTQIQNFKIEFEALKKFIGELELKLKGLSFDSNQFSLA--------EQQLTQAQN 807 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 + ++ + S ++++ +++ L++ +A++ ++ E+ + +L +G F + Sbjct: 808 EQKQISDSVVTKAAEIERLEKEFVKKEELLKALAKLQKRSENLKVMMNLF---KGAGFVQ 864 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + + L L AN + R+ R L + +E + E++D R +TLSGG++F Sbjct: 865 YVSSIYLRQLCDHANVRFHRMT-RNQLSLQLNENNDFEIIDYLNEGKSRSVKTLSGGQAF 923 Query: 958 LVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 VSL+LALAL++ V + D F+DEGFGT D+E+++ + L L + +G+IS Sbjct: 924 QVSLSLALALAESVQANAQADKNFFFIDEGFGTQDTESVNIVFETLTNLMKENRIVGIIS 983 Query: 1016 HVEAMKERIPVQIKVKKINGLGY 1038 HVE +KE+IP + + K G Sbjct: 984 HVEELKEKIPTALNIIKDEERGS 1006 >UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYY9_9SYNE Length = 1002 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 220/1069 (20%), Positives = 374/1069 (34%), Gaps = 123/1069 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LR++ +I F + + GLF I G TGAGKT LLDA+C ALY E Sbjct: 1 MKPHLLRIEAFGPYAEPVEIGF--DVLSQEGLFLIHGSTGAGKTFLLDALCFALYGEVSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 +V ++D A +EF G YR S + G + P+ L Sbjct: 59 DRSVKALKSDH-AEPAAVPRVSLEFSSGGARYRVERSPAYTAPKTRGEGTTEKAPQAVLF 117 Query: 118 RCAD--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R + +A + + L GLD +F + +LL QG+FA L A+ +ER LL+ Sbjct: 118 RLVSAGWEPIASRTTEVSREVQGLVGLDAAQFRQVILLPQGKFAEVLRARAEEREALLKT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTE-------LEKLQAQASG----------VTLLTPEQV 218 L T IY Q + + E+ K +R E LE ++ QA+ V E + Sbjct: 178 LFDTVIYEQAGSWLEERAKFSRIEVAEQNRSLEVMRQQAAHEWTPFAPEPVVAPNDQEGL 237 Query: 219 QSLTASLQVL----TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEE 274 + L + + KQ + + Q + + + + L + A++E Sbjct: 238 ERLVEQIAAVVAGTQSSLKQAVATLESAQTAKAAVEKLADRWDRRRAALTRLTELEAKQE 297 Query: 275 KAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA 334 LS A+ A LRP + AL+ + I+ LQS + R + Sbjct: 298 AVADFRQRLSRAERAEALRPSVDAEQAARVALSTLEAGIK---AELQSAIRARDTADALP 354 Query: 335 AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 S + E +Q + + + A+ Sbjct: 355 VSLVLLDLTALPSPEELGSARNDLAARRAELTALASQALEAGQAQARAAAAAARARAADL 414 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 +L++ ++ A A + R L L + + Q Sbjct: 415 RLSS-SSAARESRQQARQAAGAAFTKACSARDQLDGLQRAAQDAHDCARAVAAITPALHQ 473 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 E+ A + R + L D + L PCP+CGS H Sbjct: 474 EKIAI-ATKAKADGRLNQAQAALNDQRRR----QIAGMAARLAGGLVPEAPCPVCGSAHH 528 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 PA Q + +++ + A E+E+ ++ + + A + D Sbjct: 529 PAPA--QPSQDAISEEAITAAESELSAATTAAQQAAVAVEKAQGERKAVLERAGTAASDP 586 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 A + + +L + + HER+L Sbjct: 587 VAADTAARQASQALTAAQALAETVASLEQEISNHEREL---------------------- 624 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 + ++ Q T L A E L+T + + E + ++ + Sbjct: 625 --EALQASIQSASTELAMQARAATDETNRAQALST------AITRELGEGVDPKQALKSI 676 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 P+ L H + Q + + + Q V+AA + + + Sbjct: 677 EPLEAALKALAARCHASASAST-RLEQASSRLARDLAGSEFADGQAVVAALKPETMRQLW 735 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 ++A F+ + L L+ L L Q + Sbjct: 736 AQRIKA--FETEVIELRGLLASADLADLPQER---------------------------- 765 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 D A V ++ E +Q EI++ + + ++A Sbjct: 766 -PDTAAALEAVLAADAARTAAVERHSEARGAQTEIQR-------LTSEHSSGAGELASRR 817 Query: 875 QQVEDWGYLNSLIGSKEG--DKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE- 930 +Q + + + + +++ L ++ ANQ+L + GRY L+ Sbjct: 818 EQAQLFSAVADRCSGRTAPFISLQRWVLSAYLGDICRYANQRLELMTSGRYQLRLTDEGG 877 Query: 931 ------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLF 981 L + V+D + R+ +LSGGE+F SLALAL ++D V S +++LF Sbjct: 878 RGGRQAGLGLRVLDAYTG-EEREVSSLSGGETFQASLALALGVADTVEAHSGGVHLEALF 936 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 +DEGFGTLD + L A+D LD L A G+ +G+ISHV +KERI I+V Sbjct: 937 VDEGFGTLDPDNLQLAMDELDRLRAGGRMVGIISHVGGLKERIRYGIEV 985 >UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1T2_CAPGI Length = 1017 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 200/1049 (19%), Positives = 415/1049 (39%), Gaps = 50/1049 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L L ++ + S + + IDF++ GLF I G G+GK+++L+AI ALY ET R Sbjct: 1 MLPLYLTIEGIYSYQEKQHIDFSQ--LTDAGLFGIFGAVGSGKSSILEAITFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L+ + ++M + + EF + + R R + + R Sbjct: 59 LNKADKRGYNMMNLKSNRFYIDFEFLNFENKHIRVTRELKRNSKKFEDVRTPIVQFYERV 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + I ++ L GL Y F R++++ QGQF FL K+R E+++E+ Sbjct: 119 GNQWIPLEQAN-----PQKLIGLSYENFKRTIIIPQGQFKEFLELGAKDRTEMMKEIFNL 173 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + + +S + + + +L + + G + E +Q L+V D++K L T Sbjct: 174 QKF-DLSDNIAKLKRENNEQLSFKEGELKGYEEIHEEAIQIQQDKLKVEKDKQKSLETEF 232 Query: 240 QQEQ---QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA-RNLRPH 295 Q + + L L EL ++ + L ++ + ++ + +NL + Sbjct: 233 DQLKTHYEHLRSLKSDFELLEQKRKEFAILYSQKKSFDELEKKVNTYEKIEKVFKNLLEN 292 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTM---ALRASIRHHAAKQSAELQQQQQSLNTWL 352 R+ + + + + + +Q + + + A ++ +E +Q + L L Sbjct: 293 KTRLTKELQSYTYKKDTDTKKLKEVQEKLINISDNINYLQEAYEKLSETKQMEADLQQIL 352 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 + E + + + L+ + E ++ +L + + + Sbjct: 353 STFPLQEKLIEEKGRTIKGTEKIAAVEKELKDKKDYNNTIENEIESLKKQ--RIDSQLLL 410 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE-MRQRYK 471 + + L ++ +I +L ++ + + + + E + + Sbjct: 411 EVGNWYEKNHALSENKNKQQQKIQGTTAQLEEITHELSLFSLFKEGFVSDFKEKITIERE 470 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 ++ ++ Q + L +L G PCPLCGS+ HP + ++ + + Sbjct: 471 NIEKEKDILRQKLNQLELQRQLSHYTKELHEGSPCPLCGSSEHPNITHFEDV-----STE 525 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L A + +K L + L+ L I K + + + + ++ +++ Q + A + Sbjct: 526 LAATQKAIKILDSQQEQLQQSLFQIEKTVDKKQFFEKQIQSEKEIALQIEKEQLAHHDKF 585 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + + ++ E L Q + +++I Q IE+ ++ L Sbjct: 586 IWSEFSKENRAVFDEKREFASALEQQIETKEALYKKGSKEIEDLQITIEKYKKGLENIFK 645 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 A ++ L E + + +Q Q +T + + Q+ E Sbjct: 646 EIATLEGHIASKKESLKVYNFE----DYKDKDFEFVQKTYQFVTKTNKYIEQTYTSLIEE 701 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 + + Q Q + +++ + +L+ AQ +L+ Q + Sbjct: 702 KNRLAPLQSQYEAQLKGTSELLEKWERELLSVEHTLESTLAQEHISLEEVT----QILSS 757 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 + E+ +++ K + E + Q Q L ++ +I+++ Sbjct: 758 PIAIEENRKKIQDFKIHYEVLQEQIQNLESKFVH------------VSFDPKAFAEIEKQ 805 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 Q+++ I +L++ ++ L++ + Q+ + E L ++ Sbjct: 806 YTLKGQEVKALHEQCIRIASELERITKALVHKKELLKSVTQLRTRNEHIKLLENIF---R 862 Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 G F ++ + L L AN + R+ R LQ + E E EV+D R +TL Sbjct: 863 GQGFVQYISSIYLQQLCQHANVRFQRMT-RGQLQLQLGENNEFEVIDFLNEGKSRSVKTL 921 Query: 952 SGGESFLVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGK 1009 SGG++F VSL+LALAL++ V K + D F+DEGFGT DSE ++ + + L + Sbjct: 922 SGGQAFQVSLSLALALAESVQSKAKADKNFFFIDEGFGTQDSEAINIVFETITGLLKDNR 981 Query: 1010 TIGVISHVEAMKERIPVQIKVKKINGLGY 1038 +G+ISHVE +KERIP+ + + K N G Sbjct: 982 IVGIISHVEELKERIPLSLTITKDNERGS 1010 >UniRef50_C3QPK2 ATP-dependent exonuclease sbcC n=9 Tax=Bacteroides RepID=C3QPK2_9BACE Length = 955 Score = 365 bits (937), Expect = 4e-99, Method: Composition-based stats. Identities = 267/1048 (25%), Positives = 469/1048 (44%), Gaps = 121/1048 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL S++G ++DF EP S G+FAI+GPTGAGK+TLLDA+CLALY + PR Sbjct: 1 MKILAIRLKNLTSIEGTVEVDFMAEPLHSAGIFAISGPTGAGKSTLLDALCLALYDKAPR 60 Query: 61 LSNVSQSQN---------------DLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARNQ 104 + ++ N +L+ R T++ AEV+F + G YR+ WS R RN+ Sbjct: 61 FATSVENVNLADVGDNQINQSDVRNLLRRGTSDGYAEVDFLGIDGRRYRSRWSVRRTRNK 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G+LQ +E+ K K+ L L GL Y +FTR++LL+Q FA FL + Sbjct: 121 INGSLQPQTLEVKELDTEKEFQGTKKELLIQLVELVGLTYEQFTRTVLLAQNDFATFLKS 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 K +AELLE+LTGT +Y +IS V+ ++K+A+ E+ +Q + + + L+ E++ +L Sbjct: 181 KGAAKAELLEKLTGTGVYSRISQEVYARNKAAQEEVTLIQNRMNVIELMPEEELLALQKE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ ++ I ++ + LN + ++ ++QQ Q+ A E+ Q LA S Sbjct: 241 KELSIEKRAAGIKLLAEQNEQLNVVRSLKIQEELWKKKQQEEQEEQAREKVLQGALA--S 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + + + WE I + QI+ + + + + A+Q +++ Sbjct: 299 QEEGLVHFKAQWEAIQPDLKKARQLDVQIQSQQSSYIQSQQILQAANRQVAEQEQKMRVA 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + L +R + + ++ +E + + E++L L + Sbjct: 359 AEQLQVSYSSLNRLLSHVGIEEALQLEQVEEILRQEE-SKLAAATSTNEERLLRLNSFGY 417 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 L A+E + Q+ +RQ L + + +L+ + N ++ T++ AL Sbjct: 418 PLLAEEQVKLQKELTRQQNIRQ----LTETQTKAKTEIERLEKEVANCLKQLTEQETALK 473 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 ++ Y+ A K ++A R QLQ G+ CP+CGST+HP Sbjct: 474 VTQRLYENAR------------MAVGKDVKALRRQLQEGEACPVCGSTAHPYH------- 514 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 E + + ++ + + + Q+ N + +L++D + Sbjct: 515 ------------QEQEVVDTLFRSIEQEYNVASTNYQQMNNRSIALQRDLAHQKTVDGQI 562 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 L + + Q + + L + +++I + + E ++ Sbjct: 563 AEQLAALYKAGIEAGNEEQIQHRLAELAIRILEYRNLYAEWQRSDEEIKKMRAHCEALRE 622 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + +++ E + ++ + L L+ QL Sbjct: 623 NVSLCRLAMQKVSSAKEQLVILQNAASAELKRFEVIEKALNVLRQERSQLLKGKSADEAE 682 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + E+ + L + ++ A+H++ LQ + A ++ + Q Q+ Sbjct: 683 AAVAKREKELNL-ALEKARKEVEAVHNRLSGLQGEMKQIALAIGELQEQYKKI------- 734 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 ++ L ++ + + + + ++ L Q +++ +T Sbjct: 735 ------------ESPELLPEIIKKQQEENLNIERALSTMEARLLQQAKNK--------LT 774 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 VEQI +EL A+ E W LN Sbjct: 775 VEQIAKEL--------------------------------------AEKQTVAERWAKLN 796 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADA 944 LIGS +G KF+ AQ TL+ L+ ANQ L+ L RY LQ+ + L ++V+D D Sbjct: 797 KLIGSADGAKFKVIAQSYTLNLLLLHANQHLSYLSKRYKLQQVP-DTLALQVIDCDMCDE 855 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +R +LSGGESFL+SLALAL LS L S+ +++SLF+DEGFG+LD+E+L TA++AL+ L Sbjct: 856 IRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSLDAESLRTAMEALEQL 915 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKK 1032 G+ IGVISHV+ M ERI VQ++V K Sbjct: 916 QMQGRKIGVISHVQEMSERISVQVQVHK 943 >UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJR5_9FIRM Length = 1007 Score = 365 bits (936), Expect = 6e-99, Method: Composition-based stats. Identities = 203/1056 (19%), Positives = 388/1056 (36%), Gaps = 96/1056 (9%) Query: 22 FTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLA 81 + GL+ ITG TGAGKTT+ DAI ALY + + A Sbjct: 3 LDMDALGDRGLYLITGDTGAGKTTIFDAITFALYGNASGEARRPKMLRSKYAPMDARTFV 62 Query: 82 EVEFEVKGEAYRAFWSQN--RARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATL 139 E+ F Y + RA+ + +G + R DG+++ K + TL Sbjct: 63 EMSFVYNEAGYCVRRNPEYMRAKQRGEGETKEKPDAELRMPDGRVITGD-KAVTQEIETL 121 Query: 140 TGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTE 199 GL +F++ +L+QG F+ L+ K ++R + E+ GT Y Q + +Q K+ + Sbjct: 122 LGLSREQFSQIAMLAQGSFSRLLSGKTEDRGTIFREIFGTRPYQQFQEKLKDQAKALYGQ 181 Query: 200 LEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEA 259 + T +I +++ ++ W Q + Sbjct: 182 YADTRKSIGQYTD---------------------GVIPGEERADLAIRWKEAQKGSLEVM 220 Query: 260 SRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 + + A EEE A ++ + L + S AL + ++ Sbjct: 221 LELLEQMITADMEEEHAADGRMK-AIREEMSALGLKLGKAQSASKALKDMEAARLVLDRE 279 Query: 320 LQSTMALRASIRHHAAKQSAE------LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFS 373 A + + Q+ + + ++++ +++Q + Sbjct: 280 APRLAAAQCNYNKEKEGQAERDILMVTITKMEEAMKSYVQYDGLTAGREECLKRIAGLKA 339 Query: 374 QQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG 433 +E +W++QL + +L L A + A+ + AE R LV Sbjct: 340 VALRTQEEEARWREQLLKDDNELADLKTAGEDYQASRL--AIEKLAEYRIRVDSLVRELS 397 Query: 434 QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTL 493 + ++K L Q Q + ++ + + + QR+ + Sbjct: 398 EYHRERKNLEQAQELYREADGKRRRADQVYRSLYQRFLD------------------NQA 439 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 +L G+PCP+CGST HPA R + + + GE A Sbjct: 440 GILARELAEGEPCPVCGSTVHPAPAG---------TGRADEIRADAGQAGEIRADAGRAD 490 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI--QPWLDAQDEHERQ 611 + + E +A + R D + + + ++ Q D++ Sbjct: 491 EIRADAVWAGEVQADTGRADTVPGGMKPETIFQGPYSDSDVTKELVDQAAKDSEARTREA 550 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ 671 L + L G + + + +QQI+ L + +E +++ Sbjct: 551 SELSLKAGRLAGGLET---RYTRMRQQIDAEVGS-WKESWRERLNQAECRADEGAVSSPS 606 Query: 672 QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHS 731 A S RQ+ L ++ + +L L + + + L++ ++ + + Sbjct: 607 GNAASPGGRQHFLKVWEDMLGELKDQLARQETAAKKRSADCRARLKHKEELEKGRVGHQK 666 Query: 732 QQQTLQQQDVLAAQSLQKAQA-------QFDTALQASVFDDQQAFLAALMD--------E 776 + ++ A + L +A+ Q F+D++ L E Sbjct: 667 SLEEAGERKQEALKLLIEAEEREKGLEHQIKELAGKLPFEDRKQAQEELAGKRAAFEAGE 726 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + + E++ + + A++ + L + R L L +E++ + Sbjct: 727 KAYREAEKVYHEVNQKVADARSRMEALRAQLEDARIDREVTALGLGRQMEELSAAQGRVR 786 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS----LIGSKEG 892 +L ++ I +L+ + + + ++ QQ L+ +G KE Sbjct: 787 AELESQEQTKSRIHHRLETNRTAYGRILKQKDAMEEIQQQWTWVKSLSDTASGEVGGKEK 846 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------KASEALEVEVVDTWQADAV 945 F + Q + ++ AN + + G +Y L+R + L + V+D + Sbjct: 847 ITFETYVQMAYFERIIARANTRFMVMSGGQYELKRCTEEDNRGKSGLGLNVIDHYNG-TQ 905 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R +TLSGGESF SL+LAL LSD + + R+D++F+DEGFG+LD +TL+ A+ AL Sbjct: 906 RSVKTLSGGESFQASLSLALGLSDEIQSAAGGIRLDTMFVDEGFGSLDEDTLNLAMKALG 965 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L + +G+ISHV +KERI QI V K G Sbjct: 966 DLAEGRRLVGIISHVTELKERIERQIVVVKEKSGGS 1001 >UniRef50_C5D6P9 SMC domain protein n=3 Tax=Geobacillus RepID=C5D6P9_GEOSW Length = 1116 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 248/1127 (22%), Positives = 465/1127 (41%), Gaps = 105/1127 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL + L+S + + IDF G+F I GPTG+GK+T+LDAI LAL+ R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFQS--LCEGGVFGIFGPTGSGKSTILDAITLALFGSVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPD-GNLQVPRVELARC 119 N +Q +M E FE++ ++ R+ + D L+ L Sbjct: 59 APNHTQG---IMNHAENELFVSFTFELENATCTKRYTVERSFKRGDEWRLKSGICRLIEV 115 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 A+ +LADK+ + + L GL FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 GAETVVLADKLTEVNKAIEQLLGLTMKDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFH 175 Query: 179 TEIYGQISAMVFEQHKSA-RTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG ++ +A EL ++ A+ +G+ + E ++ L+ L D ++ Sbjct: 176 LEPYGDKLNKKLKEKLAAISNELNEVIAEKTGLGDASEEALERAKQELETLWDLLQKRKA 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + ++ + Q+E + L + +EE + A+ A + P+ E Sbjct: 236 ELHDMEVTMERTKQLWAWQREKEELEAELARLASEESHIRLLENRKERAEQAERMWPYLE 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRAS-------IRHHAAKQSAELQQQQQSLNT 350 + E + + ++ +E+ +L L IR A L +++ L Sbjct: 296 QYEEARRFVINAEEKQKELQKKLVQAKELYEKATHRYERIRQEKAASEPHLLAKKEQLTQ 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQF-SQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 Q + E R Q + +R+ L +WQ+ E+ L + L Sbjct: 356 AKQLAAQIHALETELNEMRKQIHLLEEEERKKLVEWQEAAKLYERGLEKQQMLKAELQKY 415 Query: 410 EVATALAQHAEQR-PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN---- 464 + + E+ +Q + + + Q+RLAQ Q A Q +E+ +R Sbjct: 416 AASIEQKEVVERAYDEKQQIERITDALQDIQQRLAQKQKAQQQANKEREKRKQRAETAKE 475 Query: 465 ---------------------EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 ++ +R QQL + EQ + QL+ G Sbjct: 476 KLHVLFQKIEKVYHSVCERQWQLEKRLYRYEQQLEQEREKAEQAKTAEMAAILARQLRQG 535 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE-NEVKKLGEEGATLRGQLDAITK---- 558 +PCP+CGS HP Y+ + +L + + + + TL+ QL+ + + Sbjct: 536 EPCPVCGSCEHPNPYVYEHNNVSSGKIAILEQQVKQGQTYMQVLHTLKAQLEQLAQFIGN 595 Query: 559 ----------------------QLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 +++ + + L++ Q Q+W+ +S Q L Sbjct: 596 EWTFQRFDVSKLKVEEDIDIAVEVKALQQDCLQLKEALQQALQKWRDAESSQQAIEQELR 655 Query: 597 DIQP-WLDAQDEHERQLRLLSQRHE----------------LQGQIAAHNQQIIQYQQQI 639 ++ + Q E E + +Q L+ Q+ H + + + Q++I Sbjct: 656 LLEKDVQELQTEREYRFNEYNQLEASWREKYTDFSFDTIEALRNQMRKHEEIVRKLQKRI 715 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL---QNRIQQLTP 696 + L T L Q+ E E+ ++ QQ ++ + +Q+ Sbjct: 716 DDSIPFLETKLNEKERLAQQQRELETEKVRLVSLWKAKQQLADDYKQQLMEKAGGKQVEE 775 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 L + + EE + W Q +Q AL ++ + +QQ + ++A+ ++ Sbjct: 776 QLLQVEKQLLYLKKEEEEAYQRWLQTQKQYQALETEAKAIQQSLEEGKERYEEAKLRWLN 835 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 L+ + F D+ A E+ + EQ ++ + + AQ + Q E + Sbjct: 836 ELKKTTFADENEVKEAKAAEELRLEWEQQIKHYWQKVQHAQHRLQQLTEAIGGE------ 889 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 + EQ+Q Q Q++ E G + ++++ + ++ L ++ ++ Sbjct: 890 --MIDQQQWEQLQTVYEQIKQQVDEAMQQVGAAQNKVEELTEKHKRFTELEKKQQELAAL 947 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVE 935 ++ + +L S++ +G+ F +F L + +A+++L+ L RY L+ + Sbjct: 948 MDRYKHLQSIL---KGNSFVEFMAEEQLIQVTRMASERLSSLTRQRYSLEVDSQGG--FL 1002 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDSET 993 + D R TLSGGE+FL SL+LALALS + + + FLDEGFGTLD+E Sbjct: 1003 IRDDANGGVKRPVTTLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDAEL 1062 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 LDT + AL+ L++ ++GVISHV+ ++ R+P ++ V+ G Sbjct: 1063 LDTVISALEKLHSQRLSVGVISHVQEIRSRLPKRLIVEPAEPSGRGT 1109 >UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococcus RepID=Q03JT5_STRTD Length = 1059 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 226/1098 (20%), Positives = 430/1098 (39%), Gaps = 100/1098 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L N + E I+FT+ F LF I G TGAGK+TL DA+ +AL+ T Sbjct: 1 MRPVQLELTNFGPYRKE-VINFTQ--FDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 NV + ++ + F+ YR + R + G + + + Sbjct: 58 DRNVEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVI 117 Query: 121 DGKI-------LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 KI L DK+K+ + + GL+ +F + +LL Q F+ FL K + ++L Sbjct: 118 VDKIGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQIL 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------------TLLTPEQV 218 +++ GT I+ + + E+ + + +++K QAQ + E++ Sbjct: 178 KKIFGTGIFDRFQKSLEERLRQSNKDMDKRQAQIDSHFASQVWSEEELTVLASTPASEKL 237 Query: 219 QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQP 278 L L + + + + + L L + + Q+ ++ Q L+QA Sbjct: 238 ARLEEFLSQRQESLTEQKSILKAAHEDLAQLQKSFQTAQDLAKIFQELEQAKERYRLEIE 297 Query: 279 QLAA--------LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL---QSTMALR 327 + A L Q A+ L+ + ++ L + Q +E L Q Sbjct: 298 EGAQGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDV 357 Query: 328 ASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQ 387 + + A QS + Q+++ L TW ++ + E + + E +Q ++ Sbjct: 358 KAKKEELAIQSEDFLQKEEELETWKEDIIYSQSLAQEQEKIKRSTTNYKQLEETYQQARK 417 Query: 388 QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 ++ + L+ L A L+L + A L Q ++ Q+ K + L Sbjct: 418 EVEMLNKSLSDLEANRLSLESLHEAEKLFQIVG--------YSVENQLAQDLKEIENLNQ 469 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 + + + ++ + +E ++L + R + +A+L+ G PC Sbjct: 470 ELTKTEKRHQTLSFDID----QAQEILKELEEELRRTLVSRRQLMIVQLQAELEEGHPCM 525 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 +CG+ HP V QA E +K L ++ L+ Q + L + Sbjct: 526 VCGALEHPNVGGAQADEV------------ALKNLMDQVEKLQAQKEKQVATLSNRQATL 573 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 + Q L Q V A+L Q L++ + +GQ Sbjct: 574 SEVASKRQDLLDQVTKVKATLEKHYQELEE-------HVKGRFDFDFSIDYETDRGQALL 626 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS-WQQRQNELTA 686 ++ QY Q++++R T Y L + ++ + LA QEA++ Q Q L Sbjct: 627 L--KVEQYYQELQKRYDKEETDYIRYQDELGKAQKKATDLAKTYQEAKAVLDQAQERLED 684 Query: 687 LQNRIQQLT------PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 LQ +L + Q L + + E + Q+H + Q +++ + Sbjct: 685 LQEAHPELESVEVYQERISLAHQELNLYNKQVKENSEAYNQLHADIKGIKGQIESITKSK 744 Query: 741 VLAAQSLQKAQAQFDTALQASV--FDDQQAFLAALMDE--QTLTQLEQLKQNLENQRRQA 796 Q +++ A+ + +L+A +D + L++ Q + L+ +++ Sbjct: 745 DKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLIEVNNQAIPMLQAKLTTYATLKQEL 804 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 Q + + E L +Q D ++I + + Q K Sbjct: 805 QAQIRKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQLAQFSVMEKGLKDATATYQAAKTL 864 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 D+ Q+ Q+++ + + V+ G +L G + ++ AN Sbjct: 865 QDSNQEAFKAHQELSDLVKVVK--GENTALTGRLN---LEVYVIRQYFQQILDYANANYI 919 Query: 917 RL--HGRYLLQRKASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 L RY L++ V D + R ++LSGGE+F+ +LA+AL+L Sbjct: 920 GLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTG-SERSVKSLSGGETFIAALAIALSL 978 Query: 968 SDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 S++V S +++LF+DEGFG+LD E L A+ L+ + + +GVISHV+ MKE I Sbjct: 979 SEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQI-GENRMVGVISHVDDMKEGI 1037 Query: 1025 PVQIKVKKINGLGYSKLE 1042 Q+ + K + G S+++ Sbjct: 1038 AQQLVIIK-SHDGSSRIK 1054 >UniRef50_Q1WSF5 Exonuclease n=2 Tax=Lactobacillus salivarius RepID=Q1WSF5_LACS1 Length = 1033 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 207/1073 (19%), Positives = 427/1073 (39%), Gaps = 68/1073 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L LR+K E ++FT F + LF I+G TG+GKTT+ DA+ AL+ T Sbjct: 1 MKPLKLRMKYFGPYIDET-MNFTE--FDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 ++ FE G Y S + GN +V+ Sbjct: 58 DERDAKQMRSDFATPNDATEVTFVFEHNGIKYTVIRSPKMNLAKKRGNGTRDVEASVKVK 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 I K + L GLD +FT+ +LL QG+F FLNA +R ++L + Sbjct: 118 YINKEQENIEITKKNQADKFLRDLIGLDAQQFTQIVLLPQGKFRNFLNANSADREKILRK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL----------TPEQVQSLTASL 225 L GT +Y + + + EQ K +E EKL Q + E + + + Sbjct: 178 LFGTSLYQKWTEKIQEQAKIIESENEKLTTQIQTIRQQVEIEDNDETNDEEWIVKVNNQI 237 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 + +++++ Q+ L+ L + ++ + + + + + + + + L Sbjct: 238 EEKKKKQEKVNNDITISQKQLDNLVETYQNEKVLADSIKQKEDYIHKLQSLENNQDKIEL 297 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + +++ + + QI+E + +L + E Q+ + Sbjct: 298 KKIYAYRLAWYQKNQQIFNNKTDLELQIKEKSDKLVLLNQESKFLIQKHETAKIEAQELE 357 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + ++ + ++ Q E + Q + ++ + L ++ Sbjct: 358 KQQENIEDLKNKISTLEVKLPVYQDVKVNQEKMSELTKNHQDTKNNLDKSVKELEKQKVS 417 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 D++ LA+ + LV + ++ +++ L + + + + + L + Sbjct: 418 Y--DDLGKELAKLENLDEKQVELVNENNKLTRLSEKI-DLVDHLDSEIESKKLQKEKLEK 474 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 Q +E Q+ D + + QL G+PCP+CGS HP LE Sbjct: 475 KYQEQEELVQESTDTEEKLNTLWIKNQIYFLAKQLAPGEPCPVCGSKEHPLPAEIDELE- 533 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 E +VK ++ R + +L +E L Q+++ + + Sbjct: 534 -------QVTEEDVKLANKKAEVERSKAKEFKLRLTSIIDEITELEQNKKESIDKIL-LD 585 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 L L+ + + DE++++ + L + L+ ++ ++Q I +E+ + Sbjct: 586 FELGKKHSLLELKEIFQIKNDEYQKKAKDLENKVSLKEKLKGNSQLIKNEIANLEKEKDK 645 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L L + + Q+++ +L+ ++Q+ + + Sbjct: 646 LKEQYDDVYYRLKMTE-------------TTLQEQRKQLSPEFEDVKQVEEYITDTKKRV 692 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E + + + + + + + + + Q+ + L K + T ++ S + Sbjct: 693 EDYQTNKDKITKELQDTKAELIKVQADIDSNHQELESKKKGLSKINKEITTLIENSEINL 752 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 ++ A + L +L+ + + + +Q + T+ +E + + + Sbjct: 753 EEIASLA----KNLARLDSINNEINSYEKQILVVKTKISELDKTINNREMPNLVERNNVI 808 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 ++ELA + + I ++ +Q+ + L+++ + + + +W L+ Sbjct: 809 VDKRKELATFQAEFSD-------ITTEINHIQKIKQEVEQLLREQKENYKLMAEWKQLSD 861 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEVE 935 ++ K K ++ + L ++++AN +L L GRY Q K + LE+ Sbjct: 862 VMTGKSATKLSLERYVLQMYLQRVLNVANGRLKELTQGRYSFQIKDEKGSYSSNTGLEIN 921 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 + D A VR +TLSGGESF+ +LALALAL +++ + +D+LF+DEGFG+LDS+ Sbjct: 922 IYD-DNAGKVRPVQTLSGGESFIAALALALALGEVIQANAGGIFVDALFVDEGFGSLDSD 980 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 L AL+AL + + IG+ISHV+ ++E+IP Q+K+ G F Sbjct: 981 ALQIALEALQTIEGKNRMIGIISHVKELQEQIPFQVKISSNYGKSKISYRKDF 1033 >UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK1_9FIRM Length = 1012 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 206/1069 (19%), Positives = 421/1069 (39%), Gaps = 93/1069 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ ++L+ + K E IDFTR +F I+GPTG+GKTT+ DAI ALY E PR Sbjct: 1 MKVRKVKLRGFLTYKDEVTIDFTR--LFDKKIFLISGPTGSGKTTIFDAISFALYGEVPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQN-RARNQPDGNLQVPRVELARC 119 + ++D ++ D ++EF + Y+ + RA + RVEL Sbjct: 59 EIAMEDLRSDYLSEDDDFTYVDLEFSLADRVYKIVRIPSQRAVELKNPKNIGHRVELYDI 118 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + ++ADK+K+ E L GLD +F++ MLL+QGQF FL +K E+A LL ++ Sbjct: 119 TGEKTLIADKIKEVDERIKDLVGLDKNQFSKVMLLAQGQFQKFLISKSDEKAALLSDIFK 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T+ I + ++ + L ++ + V ++ L + D E Sbjct: 179 TDALRAIQDELKKRANENKKMLAQVDKDLANVLSDNELLQGKISEDLILRRDFENIFQII 238 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPHWE 297 Q E +L + + + ++ L L + + + ++ + L ++ Sbjct: 239 AQTEADQEGFLKEILKSLDKLKKNEKNLISDLEKAKTLNENIVKYKKSEETYQALLVDFD 298 Query: 298 RIAEHSAALAHI--RQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 + + L + I+ RL+ T A + L ++ Q+L +E Sbjct: 299 KNTDLKRDLDLLFYALSIKIYEDRLEKTKADLGDFEENKLGIEKNLAKKNQALVEVEKEV 358 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLR------QWQQQLTHAEQKLNALAAIT--LTLT 407 ++ N+ + S++ + L + + + ++ L L Sbjct: 359 EKLPSLKNKLDQAKISHSKKVKEIADLEEFLRVKKSYEAIKDLDKDLERLQTEIKNDERN 418 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ--EQTQRNAALNE 465 DE+ + + L + ++++++++ ++N+ + ++ + N E Sbjct: 419 LDELRNLYDI------ISKDLARAKEEDFANKEKISEIKTRLENLAKDYQKIKENKTYEE 472 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + ++ ++K +++ + +L A CP+CG Sbjct: 473 KLASLAKDLEKTENLKNKADEDRENLEINKLIDRLNAEGLCPVCGKAHQGE--------- 523 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 R +L L++ E +R D + ++ Sbjct: 524 ------------------------REKLAVSDLDLEKISQELADIRIDLEKTKAIYERNL 559 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 L + + + D +D LL +L G+ + + + +I ++ Sbjct: 560 KDLGTAYKLGEIEKIIADNKD-------LLKSYQDLGGKTKEKIKTLTEKANEIGKKGVD 612 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L + + LA + + E T + +L ++L + Sbjct: 613 LKKAREKKEKACEEISAKLKNLADLK-----IKYLSGEKTMAGLDMAKLLGEKKSLEEEI 667 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + + + + L + A + L+ Q F+ L+ F++ Sbjct: 668 SSTTTFIKDKEKAHQDLVLAISKQKASLAALIENIAKANEDLKTYQKDFEDKLKEK-FEN 726 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 +A++A L E L + L + + +T T E + + P+D + Sbjct: 727 LEAYMAYLSREGELKAQKDLVETYFTDLAREKT----TKENFSFFKDKAPEDLFKFEDDL 782 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 +++ +E+ + L ++ I +K+D ++ +++ Q V + L + Sbjct: 783 KEVTREI----KVLDDDKIKLSTILNSIKKDEGKIKKIHASYLSLSKTAQIVSNLSDLAN 838 Query: 886 -LIGSKEGDK---FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALE 933 G +G + F F + D +++ AN + ++ G++ + R ++ L+ Sbjct: 839 GQTGGVKGLERLDFETFILSVYFDRVLNFANLRFNQMTDGQFSMVRKTEAVDARSKMGLD 898 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLD 990 ++++D+ R TLSGGE+FL SL+LAL LSD + RID+LF+DEGFGTL Sbjct: 899 IDILDS-NTGKKRPASTLSGGENFLASLSLALGLSDEIGAENGGIRIDTLFIDEGFGTLS 957 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 E L A++ ++ L+ + +G+ISHV+ +K+ I +I + G S Sbjct: 958 KEFLANAIETIEKLSKENRFVGLISHVDELKDAIEAKILITYDPSQGSS 1006 >UniRef50_Q9HWB8 Nuclease sbcCD subunit C n=6 Tax=Pseudomonas aeruginosa RepID=SBCC_PSEAE Length = 1211 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 343/1217 (28%), Positives = 503/1217 (41%), Gaps = 182/1217 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL GE +IDFTREP +S GLFAITGPTGAGK+T+LDA+CLAL+ TPR Sbjct: 1 MKILAIRLKNLASLAGEQEIDFTREPLSSAGLFAITGPTGAGKSTVLDALCLALFGSTPR 60 Query: 61 LSNVSQS--------------QNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 L + S S + +L+ R A AEV+F + G YRA W R+R++ Sbjct: 61 LESTSASSKVPDGRNELSSNDERNLLRRGCASGYAEVDFVGIDGHRYRARWETRRSRDKA 120 Query: 106 DGNLQVPRVELARCADGKILA-DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 DG LQ + L ++LA +K + E GL++ +FTR++LL+Q +F+AFL A Sbjct: 121 DGALQKSQQSLQDLETQQMLAANKKSEFREQLEQKLGLNFAQFTRAVLLAQSEFSAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R LLE+LT T +Y Q+S +++ A + ++L+ + G L + L A+ Sbjct: 181 SDNDRGALLEKLTDTGLYSQLSKAAYQRASQADEQRKQLEQRLEGSLPLAEQARAGLEAA 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 L+ Q A Q+ + W T + L Q Q L +A + + L Sbjct: 241 LESHAQARLQEQQALQRLEGQQQWFTEEQRLLQSCEHAQGQLAEARQAWDALATERETLQ 300 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEV-------NTRLQSTMALRASIRHHAAKQ 337 + +R ER+ + L H QQ + RLQ A R A+ Sbjct: 301 WLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAAGTERLQGLQARLQEARERQAQA 360 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 L+Q Q L Q R+ A + Q +QL +Q+ Sbjct: 361 DNHLRQAQAPLREAFQLESEARRLERTLAERQELHRQSNQRHAQQSDAARQLDMEQQRHV 420 Query: 398 ALAAITLTLTADEVATA---------LAQHAEQRPLRQHLVALHGQIVPQQKRLAQ---- 444 A A D A A Q A RQ + Q+ +K LA Sbjct: 421 AEQAQLQAALRDSQALAALGDAWVTHQGQLATFVQRRQRALESQAQLPELEKSLAHAGEP 480 Query: 445 --------------------------------------LQVAIQNVTQEQTQRNAALNEM 466 L Q V ++ L E+ Sbjct: 481 LERLQAQWTALHGSEPDDLAARLVELRRQTDSLERQQALHKEWQQVLDQRAGLARRLGEL 540 Query: 467 RQRYKEKTQQLADVKT-----------------------ICEQEARIKTLEAQRAQLQAG 503 QR E+ Q L D+K ++ AR ++E RA L G Sbjct: 541 DQRMVEQEQALLDLKRQGSQCAEEVKAAEQALQVTRELLQRQRLARSASVEQLRAGLVDG 600 Query: 504 QPCPLCGSTSHPAVEAYQALEP--GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 + CP+CGS HP + Q L + + E +++L + LR + ++L Sbjct: 601 EACPVCGSQEHPYHHSEQLLAALGEHDDQEQVRAEQSLERLRQTLVGLREGYSSQRERLN 660 Query: 562 RDENEAQSLRQDEQALTQQWQAVT-----------ASLNITLQPLDDIQ----------- 599 + E Q L AL +Q T A L Q LDD+ Sbjct: 661 QSRQEQQELTGQLAALDRQLDQWTLPEELRLLQPSAQLEWLAQRLDDLAGQRQQCQRDFD 720 Query: 600 -----------------PWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + ++ L QR+E Q + Q ++ E Sbjct: 721 RLIARQRQTQQLQQELRAAETILQQRQQALTEQRQRYEHLQQQVEEDSQQLRPLLSDEHW 780 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 Q+ L + ++ A QQ Q Q+ + +++Q Sbjct: 781 QRWQADPLRTFQALGESIEQRRQQQARLQQIEQRLQELKQRCDESSWQLKQSDEQRNEAR 840 Query: 703 QSDELPHCEETVVLEN-----------------------------------WRQVHEQCL 727 Q++E E + + E+ L Sbjct: 841 QAEERAQAELAELNGRLGAHLGQHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQL 900 Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT-LTQLEQLK 786 L + LQQQ Q+ QA + + D A L + TQ + Sbjct: 901 RLAEALEHLQQQRQRQQDEFQRLQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQL 960 Query: 787 QNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQ 846 Q L+ + + QTL + L QH++ RP+ E ++ L Q ++L + + Sbjct: 961 QRLQEEITRQQTLEAERQAQLLQHRRQRPE------TDREALEDNLRQQRERLAASEQAY 1014 Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 E QL+ D R+Q Q L+ ++ + + WG LN LIGS GDKFR+ AQG LD Sbjct: 1015 LETYSQLQADNQRREQSQALLAELERARAEFRRWGRLNELIGSSSGDKFRRIAQGYNLDL 1074 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 LV +N QL +L RY LQR SE L + VVDT D +R +LSGGE+FL+SLALAL Sbjct: 1075 LVQHSNVQLRQLARRYRLQRGGSE-LGLLVVDTEMGDELRSVYSLSGGETFLISLALALG 1133 Query: 967 LSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 L+ + S K RI+SLF+DEGFG+LD E+L A+DALD L A G+ + VISHV+ M ERIPV Sbjct: 1134 LASMASSKLRIESLFIDEGFGSLDPESLQLAMDALDNLQAQGRKVAVISHVQEMHERIPV 1193 Query: 1027 QIKVKKINGLGYSKLES 1043 Q++V++ G G S L+ Sbjct: 1194 QVRVQR-EGNGMSSLKV 1209 >UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae RepID=B1HUN1_LYSSC Length = 1026 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 223/1072 (20%), Positives = 431/1072 (40%), Gaps = 97/1072 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + K IDF + + LFAI+G TGAGKTT+ DAIC ALY Sbjct: 1 MKPLKLTITAFGPYKNTEIIDFQQ--LGEHRLFAISGKTGAGKTTIFDAICYALYGAGSG 58 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + D E+ FE+ G Y+ + + +VELA Sbjct: 59 EDRQDTALLRSGFADDDVYTAVELIFEMHGRVYQILRQPGHIKGKNK-TATGKKVELAEV 117 Query: 120 ADGKILADKVK-----DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 +G + + V+ + + + GL +F++ ++L QG+F L + + +L Sbjct: 118 REGMLDYNIVEKQQTLEVDKKIQEIIGLTKDQFSQIVMLPQGEFRKLLTSDSTNKEVILR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEK---------------LQAQASGVTLLTPEQVQ 219 ++ T+ +G ++ ++ + K A ++LE+ L ++S + + + Sbjct: 178 KIFKTDRFGAMTKLLDAKRKEAESDLERAKQLKEHLLGQIVGALPQRSSPLFKQIADNTE 237 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ Q L +E + Q+ + +QE R + L + E+ K Q + Sbjct: 238 NMFQLKQALEEELTYYKKCFEDIQRQYEEAYNHHQKEQEFYRLAKTLNEQFEEQSKRQER 297 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 L L Q + + +AE + L + QQ ++ Q+ + Q+ Sbjct: 298 LQMLLDEQDKYHAKEREIALAEQAERLLLLEQQCMDLRAE-QNLKEQAYQQAQSSQLQTK 356 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 EL Q+ Q + + RQ + + + Q Q + Sbjct: 357 ELLQRAQEKYEAEEAKESERQLLLQQEMQLQALLPKFEAYDSHVQQLQIAEQYVKTAKQG 416 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHG--QIVPQQKRLAQLQVAIQNVTQEQT 457 AA + L E A + + G + +P+ + L + ++N T+ Sbjct: 417 AADNIVLIEKESAQLEQLSQSIEHYEKQMEPYEGYLEKLPKLQEQVTLLMQMENYTKTVE 476 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP-- 515 + + RY++ +L + EQ QL+ GQPCP+CGST+H Sbjct: 477 IAKQDVIATKARYQDSRLELQQL----EQRWLTSQASVLAQQLKEGQPCPVCGSTAHQQT 532 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 E + +E ++ + + ++ + E+ A LR + L++ + + + Q Sbjct: 533 HNEKLEIVELAQVETLRVKVSSDERLYLEKEAMLRSAQQLQQETLKQLDAHSIKQQDQAQ 592 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 + + ++ + Q + +++ +L +++ +L+ ++ + + Sbjct: 593 IIASLEKMEKEITSLRVINQQLAQTRKNQKEQRLTIEQLQNKQLKLEEYLSEQMKSWTRL 652 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS-WQQRQNELTALQNRIQQL 694 Q +E++ + + T + TLPQ + + ++ ++ + Q WQ+ Q+ L A++ Sbjct: 653 QAIVEEQHKQMPTNIP----TLPQLKQTLTDVSQQKMDFQKLWQESQHHLHAMKEADSNA 708 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 +E Q+ E + + QF Sbjct: 709 KLAVEIAKQNFE-----------------------------------ELKLKMNDKREQF 733 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 T++Q + F + + AA +++ TQLE+L++ + Q TL Q +E Q Sbjct: 734 STSMQEAGFVSYEDYAAA---KRSATQLEELRRACSDYTLQVHTLKIQISEGEKHLQGKE 790 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 D + TV+ ++ + +I +K + + +++ + Sbjct: 791 EQDLALMEATVKSLR-------IAYEDAFKQLQQIDGFVKSCQSFMNKVEETERELRLLE 843 Query: 875 QQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA--- 928 + L L+ + K F ++ Q LD + AN +L L G++ L+R Sbjct: 844 SEAGRVKELYGLLNGQNSKKLSFERYIQINYLDQITEAANIRLNHLSNGQFELRRSDRLE 903 Query: 929 ----SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLF 981 L ++V D + D +RD +TLSGGE F SL+LAL ++D++ I+++F Sbjct: 904 KHAKQSGLGLDVYDAYT-DQLRDVKTLSGGEKFNASLSLALGMADVIQSFQGNIHIETMF 962 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI 1033 +DEGFG+LD E+L+ A+D L L SG+ IGVISHV +K +P + V+K Sbjct: 963 IDEGFGSLDEESLNKAIDTLIDLQDSGRMIGVISHVPELKSAMPAVLHVEKT 1014 >UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLA0_9FLAO Length = 1007 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 281/1070 (26%), Positives = 475/1070 (44%), Gaps = 91/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL + KN+NSL+GE++IDFT+EPF N LFAITGPTG+GKTT+LD I LAL++ PR Sbjct: 1 MKILKIAFKNINSLRGEYEIDFTQEPFLQNSLFAITGPTGSGKTTILDVISLALFNHVPR 60 Query: 61 LSNVSQS----QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 L +S + + ++TR+ + A++ ++ + + W + RN GNL+ +EL Sbjct: 61 LGKMSTNEVLKKGAILTRNQEDANAQITYQCNQGIFTSRWEISTNRN---GNLRDYHMEL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 +IL K D L GL+Y +F +S++L+QG+FA FL KER LLE++ Sbjct: 118 INTVSNEILDLKKSDVPGKNEELIGLNYDQFIKSVVLAQGEFAKFLQVPKKERGALLEKI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGV--TLLTPEQVQSLTASLQVLTDEEKQ 234 TGT+IY +I VF ++K E++ +A+ LL + + + L + +K+ Sbjct: 178 TGTDIYRRIGIEVFLRNKERAKEIDAKRAKIETFREQLLEEDSFAAKQKEAETLAERQKE 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL-AALSLAQPARNLR 293 L + +Q + + + + E + Q+ L + ++ +E + + AL + + Sbjct: 238 LKQSIEQFTKEIELKKKLQVEEGELQKTQKELSEVVSLQENFEKEKGDALKHHEAIQLFA 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA----------ELQQ 343 + +I L++ R + ++Q ++++ Sbjct: 298 EELNHWQSLQEKQKEKQTEITRATEALEAAKTRRERLTQQLSEQFKLTVTPTDFPEKMER 357 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + + E + R +++ R L+ + T ++K + Sbjct: 358 YKAEVRALIDERNALRTAFETSKNPLQTAAREFDLRLDLKDLKGFETALQEKFTKTKSAY 417 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHG------QIVPQQKRLAQLQVAIQNVTQEQT 457 L + ++ L + + + + + + ++Q Sbjct: 418 ADLENRFDLKNASVAERLAAIQSKLKNIRAAEKAHTALSTLETQRKERSKEHVALQKQQA 477 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + +++Q+ + K Q + E K LE R LQ +PCPLCGS HP Sbjct: 478 PLPEEIKQLKQQIELKEAQHTAKQKTLEVAQLQKQLEDYRKDLQNNEPCPLCGSLDHPFA 537 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E G+ ++ +L LE+E+K L +E AT L +T+Q Q+ E + L ++ A Sbjct: 538 AHIPQEENGL-KAAVLQLEHELKTLNKELATKESSLQQLTQQTQQLEQRIKVLDEELSAQ 596 Query: 578 TQQWQAVTASLNITL--QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 + A +L T ++++ L+ Q++ L Q + GQI + Sbjct: 597 QTTFDAQFKNLMQTKGNATFNELELQLEQQEQELNSAEKLQQNIKTLGQIEQQTSDLKAL 656 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 + ++ + +G E SW + Q+ +Q++ L A + + L Sbjct: 657 LAKGKKIAASISAVYSGKDFEQDVSQLETSW----NRNEQTAKQQEQLLNAAKEAERDLA 712 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 LE+L S Sbjct: 713 KKLESLTVS-------------------------------------------------LL 723 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 L+ +D + L ++ T + + ++ + +TL + E + + Sbjct: 724 DQLKEKGYDAIEDALQMRLNAATAQTWKHELEQIKQDALRLKTLRNKLIEEIQILKDTVG 783 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 + +E +Q+E + + ++N S + +QL DN +Q + L +QI Q + Sbjct: 784 E------TPLEALQEEHQKQTEAHQQNEHSASVLSRQLLNHKDNLEQIRKLQKQIDQELE 837 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL-QRKASEALEV 934 + W L LIG +GDKF FAQ LTL L+ LAN++L RL RY + Q E + Sbjct: 838 SSKHWQVLFDLIGDSKGDKFNNFAQDLTLQQLLQLANKRLMRLTDRYQIDQPAEDEDDSL 897 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETL 994 +D R +TLSGGE+F++SLALALALSDL S I+SLF+DEGFGTLD ETL Sbjct: 898 VAIDEHMGGQRRSIKTLSGGETFILSLALALALSDLASRNIEINSLFIDEGFGTLDPETL 957 Query: 995 DTALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 D LD L+ L A K IGVISHV+++KERI QI++ NG GYS L+ Sbjct: 958 DQTLDTLEVLQAESSKMIGVISHVDSLKERIATQIQLT-QNGQGYSSLKV 1006 >UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6P234_9BACE Length = 1098 Score = 362 bits (928), Expect = 5e-98, Method: Composition-based stats. Identities = 206/1111 (18%), Positives = 394/1111 (35%), Gaps = 78/1111 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + G ID E GL+ ITG TGAGKTT+ DAI ALY E Sbjct: 1 MRPLKLTVSAFGPYAGRVTIDL--EKLGPKGLYLITGDTGAGKTTIFDAITYALYGEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR--NQPDGNLQVPRVELAR 118 + + E+ F G+ Y + R + +G Sbjct: 59 DNREVSMFRSKYAQPDTPTEVELVFSYGGKTYTVRRNPEYERPAKRGEGTTTQKADAELT 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG+++ + ++ + GL+ +F++ +++QG F L A K R E+ E+ Sbjct: 119 LPDGRLI-TRAREVNRALIEIIGLNRSQFSQIAMIAQGDFLKLLLADTKSRQEIFREIFK 177 Query: 179 TEIYGQISAMVF------------------------------------EQHKSARTELEK 202 T Y + E+ ++ ++ Sbjct: 178 TRYYMVFQEKLKGEAGNLQRDCEAARASVQQYIGGVVCREDEPLRARLEKAQAGELPFQE 237 Query: 203 LQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 + E+ L L E K+ + +++ + + ++E + Sbjct: 238 TTELIRQLIANGREEEGDWQKVLDRLDAELKETSILLGKAEEAQKNREKLELARRERAEL 297 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPA----RNLRPHWERIAEHSAALAHIRQQIEEVNT 318 ++ A + + L P ++ +++ A LA + I + Sbjct: 298 VPQVEAAQKALQAEMEKAPRQELLNQELGALEAELPRYQELSQREAGLAAQTEHIAALER 357 Query: 319 RLQSTMALRASIRHHAA---KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQ 375 + + + + +++ L + L + ++ + Q Q Sbjct: 358 KCREQEEAQRAGAEALDAWKREAEALAPVEAEKERLLGKKNQAESRKSALEVLETQVGQW 417 Query: 376 TSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQI 435 + + + Q++ +++ LAA L A A Q + LH Q Sbjct: 418 KACLRQISEGQRRREELDRQRETLAADLLRKKEQLQANRETFQATQSLTEERQEQLHRQE 477 Query: 436 VPQQKRLA--QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTL 493 ++++LA L A+ E+ A+ E+ ++ +E+++QL + + + Sbjct: 478 RLRERQLALTTLASALDGYAVEEKSLQAS-QEVYRQARERSEQLEEDYRRKNRAFLDEQA 536 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 L GQPCP+CGS HPA N S LE + + + Sbjct: 537 GLLAQSLTEGQPCPVCGSLHHPAPARLSG-----NASTEAELEASKEAWEAAQRETQEKS 591 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 A E L ++ A TA +++ D + Sbjct: 592 LAAGTARAALEERRNQLLRELAAYVDTPALDTARQQLSVCQSDVERELAQVHGALLELEG 651 Query: 614 LLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL---ATR 670 L+ R +L+ +I + + ++ Q Q + Q ++ E+ L + Sbjct: 652 RLAHRQKLEQEIGRQEEVLEDLTKRQGQLQAAITQAEVAQGALGGQREQLEAALCRELAQ 711 Query: 671 QQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALH 730 E + + + + + L + + + + ++ AL Sbjct: 712 HLEPCTLEDAPKAIAGALEQTRNALSQLAEQERILQKSSQRKAELDRQIPVAEQKLRALE 771 Query: 731 SQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLE 790 L+ + A ++ Q + + F + A A + +L+ L L Sbjct: 772 EDAGRLKAELAGAVSRREEMAGQVQSLREGLSFPEPDA--AQRRMDALREELQGLAMALA 829 Query: 791 NQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIR 850 R A + Q+ V + Q ++ E + +Q I Sbjct: 830 KARETAAARQGELTAADGAIQELEHLLERTQEVDAQAQQLRSQALTRQRAEASEAQKAIH 889 Query: 851 QQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDN 906 +L + + + ++ Q+ L++ + KE + Q D Sbjct: 890 TRLVTNETALENILGKSADLEKLEQKYTWMRTLSNTVNGNLAGKEKIALETYIQMTFFDR 949 Query: 907 LVHLANQQLTRLH-GRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 ++ AN +L + G+Y L+R ++ LE++V+D + + R ++LSGGESF Sbjct: 950 ILQRANLRLMVMSGGQYELKRRREAENNRSQSGLELDVIDHYNG-SERSVKSLSGGESFK 1008 Query: 959 VSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SL+LAL LSD V + R+D++F+DEGFG+LD E+L AL AL L + +G+IS Sbjct: 1009 ASLSLALGLSDEVQSAAGGIRLDTMFVDEGFGSLDEESLAQALQALTGLTEGNRLVGIIS 1068 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 HV +KE+I Q+ V K G S++E + Sbjct: 1069 HVAELKEKIDKQVVVTKEK-SGGSRVEIVVS 1098 >UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA6_9LACO Length = 1034 Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats. Identities = 206/1076 (19%), Positives = 431/1076 (40%), Gaps = 73/1076 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 MK L L++KN + ++DFT+ F+ LF ITG TG+GKTT+ DA+C ALY + Sbjct: 1 MKPLKLKMKNFGPYEDA-EVDFTK--FSEAPLFLITGATGSGKTTIFDAMCFALYGRSST 57 Query: 60 -RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWS-QNRARNQPDGNLQVPRVELA 117 + NV ++D + + E+ F +G+ Y S A + +G + + Sbjct: 58 DKDRNVFLLRSDFVKDCKEKTEVELTFSHQGKEYTVNRSFYQTAGQEKNGKITKKAILRY 117 Query: 118 RCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + DG ++ K + +L L +F++ +LL QG+F FL + ++ ++L ++ Sbjct: 118 QDEDGNLVELKGPNEIGVKVTSLLNLSAEQFSKIILLPQGKFKEFLMSDSNKKEKILNQI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQA------------SGVTLLTPEQVQSLTAS 224 GT+ Y + + +Q +R++ ++ Q + + +L Sbjct: 178 FGTDFYDDWVSEIKKQADESRSDSDEAQKELLFEQKQAIFSEAEPEAEPVEDWFDALDLQ 237 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ + + A+++ Q+ +N ++ L + + Q ++ ++E + + A ++ Sbjct: 238 IKSDEENCAKAKEAEEETQKKVNEALKKMALAERLEQDFQEFEEVSRKKELLEREQAKIN 297 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 ++++EE+ ++ A + + +K + Sbjct: 298 EQTNYLAELNWAFGCETMVFRKKTSQKRLEELRADIERQNAEFSETKEKFSK----ALET 353 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 +QSL + D+ + N G + + L Q Q + +KL A Sbjct: 354 KQSLLREAPQKDKVQADFNLWQGRVGIYDEAEQKNAELADLQAQADKSSKKLAEKKAELE 413 Query: 405 TLTADEVA--TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 A + A + +++ + L Q+ +K+L +V Q Q Sbjct: 414 RKIASKNALDEFIEKNSGAADEKHCLELEIQQLKENEKKLQDYKVQ-QQKAQVLKNEQVV 472 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 L + E + + + + L+ G+ CP+CGS HP+ Sbjct: 473 LEKESTEASELQKTAEQEYENIQSQWAKLQINELAKLLKPGEACPVCGSLEHPSPAFGDE 532 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 V ++++ + + + + +++ + + +++ + + ++ Sbjct: 533 KTVYVTENQVKKAKEKHDE----------AVADASEKKAKADAKSKEFSERQADFLEKIT 582 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + SL + +++ LDA + LSQ E + ++ Q +IE+ Sbjct: 583 EFSRSLGYDTIEISELEKKLDA--KRSDNEEKLSQARETARKRTEAEVKLKTLQTEIERG 640 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++L+ + +++ LA + L + + + E L Sbjct: 641 EELVSDLKQELSECQATISGKKAGLAELE-------------KQLPKQFKTRKELQEQLN 687 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 Q DE + + ++ L ++ +LQ +L F AS Sbjct: 688 QWDEFVKKYDA----DKENNDKEISDLDKRRASLQSLIEKENINLGNESNLFH----ASE 739 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + + A L + + L +L K + R+ + A ++ + + Sbjct: 740 KEIESACLKKGISAERLYELLAEKDRIAEIEREISDFQKKEATVSGEYAASQKKIDGKIR 799 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E+++Q ++ R + L ++ + R++ + + + + + E Sbjct: 800 PNIEEMKQIQRDEQERHRRAKEFLQQSDNLLNKNRECRRKAEKVWKNSKEKLELAERKQS 859 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKA-------SEAL 932 L +++ ++G F +F +++ +AN L +L G RY L + L Sbjct: 860 LYNVLRGQKGIAPGFSRFVLANYFRSVIEVANIHLDKLTGGRYNLVLDDTAKANLKNMGL 919 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTL 989 E++V D A R TLSGGESF+ SL+LA+AL +++ I+++F+DEGFGTL Sbjct: 920 ELDVYD-DNAGVNRPVHTLSGGESFIFSLSLAMALGEVIQERNGGISIEAMFIDEGFGTL 978 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 D E L + L AL +L + + IG+ISHV+ KE+IP QI+V G+ ++ F Sbjct: 979 DDERLQSVLSALQSLENNNRMIGIISHVDKFKEQIPAQIQVTSKEGISTIGYQTEF 1034 >UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonadales RepID=Q3ICS6_PSEHT Length = 1217 Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats. Identities = 302/1218 (24%), Positives = 489/1218 (40%), Gaps = 179/1218 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI ++R+ NL S+ +IDF P GLFAITG TGAGK+T+LDAICLALY +T R Sbjct: 1 MKITAVRIHNLASIVDA-EIDFLAAPLKDAGLFAITGDTGAGKSTILDAICLALYAKTAR 59 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEFEVKGEA-YRAFWSQNRARNQPD 106 L ++ +L+ R T+ AEV+F + + YRA WS NR+R + D Sbjct: 60 LGGDRGNKVEFQGDSIRLNDARNLLRRGTSNGYAEVDFVGQDKESYRACWSVNRSRGKSD 119 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 GNLQ + L D +++ ++ GL + +F+R++LL+Q +FAAFL A Sbjct: 120 GNLQAAQHTLHLLPDDTLISSDKSKTVKQIEAKIGLTFDQFSRAVLLAQHEFAAFLKATG 179 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ERA+LLE LTGT+ + +I +FE++K + + E LQA + TLL+ +++ + SL Sbjct: 180 DERAQLLECLTGTDKFSRIGVRIFERNKELKEKFELLQASLASYTLLSEDELAAKQTSLN 239 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + + +Q+LNW + + L+Q + QQ QQA E Q A Sbjct: 240 ELKLQIEHTKKTLTTTEQNLNWYKQANTLEQALKQAQQNQQQAQNELNAIAQQSEQAKQA 299 Query: 287 QPARNLRPHWER---------------------------------IAEHSAALAHIRQQI 313 Q A ++ + R +++H L ++Q Sbjct: 300 QSALEIKDNRSRFKSLTAQNIELNTKVSDLKSIDHTAIITAHANTLSKHQEILQTAKEQK 359 Query: 314 EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL------------------------- 348 + + L + + A + QQ ++ Sbjct: 360 QTAEPIIAKARELDSQLAIQAQTIANLTQQSEKEQLQLNDLQQQFKQSQSVLDEATKLSA 419 Query: 349 --NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ---WQQQLTHAEQKLNAL---- 399 WL H + + N+ ++ F+Q + E L+ Q+L + K L Sbjct: 420 QHQQWLTTHTQLKPLANDWNYYQHSFNQFLNATEQLKTTAHQNQKLVAEQAKQATLLTAQ 479 Query: 400 -----AAITLTLTADEVATALAQHAEQRPLRQHLVALHG--QIVPQQKRLAQLQVAIQNV 452 + L + + L + Q + Q L + Q++R Q ++ Sbjct: 480 NAKVESQEQLLASEQKNLNQLNEQQRQFNIEQCDAKLKNIDYLKDQRERYKQFNHELKYS 539 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---------KTLEAQRAQLQAG 503 TQ+QT+ L + Q Q LA + + + +E R QL Sbjct: 540 TQQQTRVAEKLIQSEQAQNALLQNLASCEQTLKHNEYTLSQARLRASENVEHLRTQLAPN 599 Query: 504 QPCPLCGSTSHPA-----------VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQ 552 +PC +CG+T HP + ++ Q R A + + + Q Sbjct: 600 EPCLVCGATEHPYASTQNQQLNNLIADFETAYNNAKQQRDSAQTQLHQHQTQHAVLVAEQ 659 Query: 553 LDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ--------PWLDA 604 + + + A T+ T L+ T + L + + Sbjct: 660 TQHSQAIQIAQAKQLEIKTTMQDARTELNDLTTEKLDETYKQLSEQKTQYFAVQTQLRTL 719 Query: 605 QDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE 664 Q++ +QL L Q Q+ + ++ Q+ + L + + L + E Sbjct: 720 QEKVNQQLNALKTEQHAQQQLQNQHVELTNQLNQLSSKHNELSVQINELSAALNAQFEHS 779 Query: 665 SWLATRQQEAQSW-------QQRQNELTALQNRIQQLTPILETLPQSDELPHCE------ 711 + Q E+ + +Q Q LT L+ +QL + L Q L Sbjct: 780 DFWQQLQSESLTLSDLNKQVEQYQQTLTQLEQSQKQLDSANQQLQQLTPLITKSDHALKA 839 Query: 712 ---------------------------------ETVVLENWRQVHEQCLALHSQQQTLQQ 738 +T + Q Q A + Sbjct: 840 LNDDLAKAQQQQNITQSQRLALFNNEQISASDYQTKLAMQLEQCQTQLNASQQAHDNAIK 899 Query: 739 QDVLAAQSLQKAQAQFDT------ALQASVFDDQQAFLAALMD---EQTLTQLEQLKQNL 789 Q A +L+ + + +L+A + F A D EQ L + + Sbjct: 900 QRDEHAITLKNVEQRLQEHAQELTSLEARYLEWFTDFKAQHSDASHEQVTILLTLSSEQI 959 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV-----EQIQQELAQTHQKLRENTT 844 + +Q + + +T A +Q + +++ ++L + + E Sbjct: 960 KAHLKQFEQVSQTLTDTNAALKQQQKSYTEHQNTDKPSKNHDELTEQLNVLNTQQTELQN 1019 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 S ++Q N + + ++ + QV+ W LN ++G G R AQ TL Sbjct: 1020 SLLATNTAIEQHNQNAKTLKGKQAELTTLKTQVDQWHLLNKVLGDATGKTMRNLAQTQTL 1079 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 L+H AN L L+ RY L +L++ ++D AD R TLSGGESFLVSLALA Sbjct: 1080 KILLHYANSHLKTLNKRYELT-AIEHSLDIAIIDRDMADEQRSVNTLSGGESFLVSLALA 1138 Query: 965 LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L L+ L S+K +I+SLF+DEGFGTLDSETL A+DALD+L A G+ +GVISHV M ER+ Sbjct: 1139 LGLASLSSNKVQINSLFIDEGFGTLDSETLSVAMDALDSLQAQGRKVGVISHVSEMSERV 1198 Query: 1025 PVQIKVKKINGLGYSKLE 1042 Q+ V K G GYS +E Sbjct: 1199 ATQVHVAKKPG-GYSSVE 1215 >UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CKX6_9FIRM Length = 1083 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 218/1089 (20%), Positives = 432/1089 (39%), Gaps = 77/1089 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + G +IDFT+ G++ ITG TGAGKTT+ DAI ALY E Sbjct: 9 MKPEKLVISAFGPYAGRTEIDFTK--LGGQGIYLITGDTGAGKTTIFDAITFALYGEASG 66 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S + E E F +G++Y+ + + G R A Sbjct: 67 QVRDSAMFRSKYAAEEIETYVEFLFSWRGKSYQVIRNPEYLARKKRGTGYTVRKSDATLV 126 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D ++ K K+ L GLDY +FT+ +++QG F L A +R E+ +L Sbjct: 127 YPDERLPVTKAKEVTRAVTELLGLDYRQFTQIAMIAQGDFQKLLLAGTAQRGEIFRQLFH 186 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGV--TLLTPEQVQSLTASLQVLT------- 229 TE+Y + + + K + ++L+ S + ++ + LT L+ + Sbjct: 187 TELYQSLQLKLKDAVKMQWKQYDELRRSISQYLNGIRYGQEAEELTEKLEEMKKSGFDGR 246 Query: 230 -------------DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA 276 E++ L+ +Q+E+ ++ ++ Q+ ++Q+ +EE+ Sbjct: 247 VVEGLELLLELTEREKEFLMQLEQKEKVLEESISESEKRLQKCMQKQELESSLRLQEEQR 306 Query: 277 QPQLAALSLAQPARNLRPHWER-IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 +P L A A+ R P +R E + IR+++E + R+++ + Sbjct: 307 EPLLQAAGKAEEERKKNPELQRKAEELEGEIRKIRERMERI-LRIETLGQKAEKLGEELE 365 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 K + Q+ +E DRF + Q + + L + +K Sbjct: 366 KVQKKCQEHTAQKEQLQRELDRFGALEAVREKYCGQLANLQEQADRLESAKDAYGTRMKK 425 Query: 396 LNALAAITLTL-----TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 AL L E+ + + E+ + Q + Sbjct: 426 EAALTEKMRQLQEELDNRKEMLKKMGEEIEKSGDAGEIRLSLYQKKNNLTVQLNQAERLI 485 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCP 507 +EQ+ L RY + + VK E+E R+ L+ G CP Sbjct: 486 EAKEEQSSLQKKLEFTTGRYLKARENYLPVKEAYEREFRLFLDTQAGILAEGLKEGMACP 545 Query: 508 LCGSTSHPAVEAYQALEPGVN-----QSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 +CGS HP + + E ++ E V+ +L+ QL+ + K+ ++ Sbjct: 546 VCGSVHHPVLAEKCSEEISKESVDQKKAAADEAEKNVRNYSAMAGSLKEQLERLKKKAEQ 605 Query: 563 DENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ 622 E +A +D + + ++ Q + ++++ + + E+ ++ Q+ Q Sbjct: 606 MEKDAGYHLEDAEWVKERLQKEIRTCG------EELKKAEETLVQREKLVKAEEQKKAEQ 659 Query: 623 GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN 682 Q+ + + + + ++ L + ++++ +S + + Sbjct: 660 LQVEQLLHEQEKKMAEAQAQKSSAREILCQILGKMEKDEKRKSDSLKDSEVQELTVSAMK 719 Query: 683 ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVL 742 L + I + +E Q E EE + Q E+ + L +++++++++ Sbjct: 720 RLKSCTGEISEKKSAVEQEIQRREELKKEEGRLRAIVEQEKEKTVQLQAEKKSVEERIKE 779 Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 + A+++ + L+ + Q + ++LK + +++ + ++ + Sbjct: 780 EQEK-NGAESEREEILKEQIL-------------QKQEEQKKLKALQQKNQQEYEQILQK 825 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 AE A Q R V E+I +E ++ ++ + + E+ + + + + Sbjct: 826 KAENEATIQTIRVQLEQLEDVNEEEILKEKSRMTEEKSQMAEEKKELYVRYSGNREIYDK 885 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 + ++ ++ L G K+ + + Q D ++ AN + + Sbjct: 886 VNVQRDLLEEVEKKYVWMKSLADTAGGNLNGKQKVELETYIQMAYFDRILRRANLRFMTM 945 Query: 919 -HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 G+Y L+R K LE+ V+D + + R +TLSGGESF SL+LAL LSD Sbjct: 946 SSGQYELKRQKAPEDKKGKSGLELNVIDHYNG-SERSVKTLSGGESFQASLSLALGLSDE 1004 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 + + ++++F+DEGFG+LD E L+ A+ AL L +++G+ISHV +KERI + Sbjct: 1005 IQANAGGICLEAMFVDEGFGSLDEEALEQAIKALGNLTQGNRSVGIISHVAELKERIENK 1064 Query: 1028 IKVKKINGL 1036 I V K G Sbjct: 1065 IIVTKERGG 1073 >UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium acetobutylicum RepID=SBCC_CLOAB Length = 1163 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 204/1191 (17%), Positives = 448/1191 (37%), Gaps = 173/1191 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + +R+K LNS + E +I+F E GLF I GPTG+GKTT+LD+I L+LY E R Sbjct: 1 MKPIRVRIKGLNSFENEQEINF--EKLTKRGLFGIFGPTGSGKTTILDSITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGE---AYRAFWSQNRARNQPDGNLQVPRVELA 117 S ++ M + EF++ G+ Y R + ++ Sbjct: 59 KS------SNFMNTNCNSLNVSFEFQISGKEIKRYLVEREFRRDNKTGSVRSKSAKIVDI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + ++L + K E + GL FTR+++L QG+F+ FL + KER +LE L Sbjct: 113 TGDEVEVLEEGAKSVNEKCQEIIGLSLDDFTRTVVLPQGKFSEFLKLEGKERRNMLERLF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 + YG +S + + + R + L + G + + ++ L+ D + Sbjct: 173 NLQEYGDELSFKLARKIRKEREKENVLVGELKGYENINEDVLKERRELLKENNDFFNEAS 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + ++ N LQ E + + + + ++++ + L + + ++P+ Sbjct: 233 KEYLKAEEEYNEGKEVWGLQIEIEEKNRVRKDLMEKKDEIDLKEKRARLGESSSKVKPYI 292 Query: 297 ERIAEHSAALAHIRQQI-------EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + +++QI + ++ + + + + K + + + Sbjct: 293 DNYENTLKQIDILKEQILSRENTMKAISLEKEDMEKKLSIAKDNKEKALPKFMIKHHIIL 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFS----QQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 ++E D E + + + ++ E ++Q + + K+ L + Sbjct: 353 DAIKEKDLLDNIKLEKKRLQGKIEKLSLEASNKEELIKQNIKDIDSLTLKIQNLESKIDN 412 Query: 406 LTADEV--------------------------ATALAQHAEQRPLRQHLVALHGQIVPQQ 439 L E + + L ++ ++ Sbjct: 413 LKVPEEYKNKINEGIFLLRNYDEKLKHKNKLGLDCDKFQVDFEKAKSKKEMLFNKLEEER 472 Query: 440 KRLAQLQVAIQNVTQEQ-------------------------------------TQRNAA 462 +L +Q++ ++ Sbjct: 473 SKLDTYTKKLQDLNKDFPKDDVLLTFQEKLNDSRQKWAKYSEYNESLKASLRVVENSEQV 532 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH-------- 514 L ++ + +++ V E R +L++G+ CP+CGS H Sbjct: 533 LRTKKEEMTKLEDKISKVNIKIESLETENMAHVLREKLKSGEACPVCGSVHHIKEGFKEV 592 Query: 515 ---------------PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATL---------- 549 ++ E + ++ + E +KKL E L Sbjct: 593 DLKALETLKSELEGFEKKRKFENEEIVMCEASIKVEEKNIKKLNESINNLGEEFKEVSLE 652 Query: 550 --RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWL-DAQD 606 + + + +++ + E L + + L+++ + + + D + Sbjct: 653 SMEKKFNYLKEKVNKFNLEKIQLDDNIKDLSERSNKIEVEYQKEKTVEKQCEKRIVDLKS 712 Query: 607 EHERQLRLLSQ--------RHELQ--------GQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 E E ++ ++ + EL+ +I + ++ + +I+ + LL Sbjct: 713 ELEEAIKEFNEVAYTIENLKAELKIQDFKFEMKEILEKERVRVEAEGEIKDLRNLLNIRH 772 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNE-----------LTALQNRIQQLTPILE 699 T + + + L+ + E + + NE L L +++ ++ Sbjct: 773 TEKEQLMDKCSRLKEELSKNKAELKEKDKIINEKIELIKNKVGVLDNLYELKEKIEGTIK 832 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 + + L + + + +R+ ++ + HS +L+ + V L K L Sbjct: 833 KIEEQYNLCDKKMNEIEDKYRKCSDEIIKYHSNLSSLKDRKVNDIDKLNK-------ILM 885 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 F++ + ++++ + L+ + +N+ + V ++ L + Sbjct: 886 EEKFENIEKAKENYLNDKEINLLKSDVEKYKNELSKVNGAVEVLSKKLKNRKLTEEKWIE 945 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 VE+ + A + ++ + +++K ++ L++ ++ ++ Sbjct: 946 IQNNRVEKASKAKALQERSIK--------LEEEVKNIEIKLKELGKLLKTKQELEHKLSL 997 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLLQRKASEALEVEVVD 938 L L +G KF +F L + A+++L + G Y L+ + + + D Sbjct: 998 LDDLEKLF---KGKKFVEFVALNQLKYISIEASKRLKEITGGNYGLE--VDDNGKFIIRD 1052 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDT 996 A RD TLSGGE+F+ SLALAL+LS+ + ++ FLDEGFGTLDS L+ Sbjct: 1053 YKNGGAKRDASTLSGGETFVTSLALALSLSNQIQLRGSAPLELFFLDEGFGTLDSNLLEV 1112 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLESTFA 1046 +D+L+ +++ ++G+ISH+E +KER+PV++ V G+G SK++ + Sbjct: 1113 VMDSLEKIHSERLSVGIISHLEVIKERMPVRLIVSPAEAGVGGSKVKLEIS 1163 >UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6LS35_CLOB8 Length = 1163 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 213/1174 (18%), Positives = 468/1174 (39%), Gaps = 143/1174 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E IDF + G F I GPTG+GK+T+LD I LALY R Sbjct: 1 MRPIKLRIKGLNSFMDEQIIDFDK--LTDRGFFGIFGPTGSGKSTILDGITLALYGNVSR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S ++ + + EF++ G R + + + DG + + ++ Sbjct: 59 KS------SNFINTNCDRLNVNFEFQISGSEIRKYIIDREFKRKKDGGISSGKCKIVEVT 112 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 ++ +ILAD VK + + GL+ F+R+++L QG+F+ FL + K+R ++LE L Sbjct: 113 SSEEEILADGVKTINKKVEEIVGLNLEDFSRTVVLPQGKFSEFLKLEGKDRRDMLERLFN 172 Query: 179 TEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + +G +S + + RT+ L Q SG + ++ E+++ +L+ L + + L Sbjct: 173 LQQFGDNLSRKLSAKISKERTDSNILAGQLSGYSDVSQEKLKEKENALEELKNNLEALKK 232 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 ++ +LQ + + Q +EE + + L + + P+ Sbjct: 233 ELDIIEKKHKENEEIWKLQLDLLYYKNKEQTLKEKEENINSYIEKIKLGEAGAKVLPYLN 292 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRAS-------IRHHAAKQSAELQQQQQSLNT 350 A ++EE+ +++ + + + +L Q+Q + Sbjct: 293 AFESTRKAFDKNEIELEELKSKIGKIKEEKEKIEQLWCMAKDKKENKLPQLMMQEQKVKD 352 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQ----------------------------------T 376 ++E + R+ N+ +AQ + Sbjct: 353 AIEEKNLIREIENKIDLLKAQIKECDAKNNNIQSELIKIEEEISNKNKLIKEDEKTYDNL 412 Query: 377 SDREHLRQWQQQLTHAEQKLNALAAITLTLTADE---VATALAQHAEQRPLRQHLVALHG 433 E L++ Q+ E+KL + I + + + + LR+ L Sbjct: 413 KIEESLKEAVQEGIIVEEKLEKINGILVKDKQKKAVIEKENSETILKGKALREVLDKEKK 472 Query: 434 QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR---YKEKTQQLADVKTICEQEA-- 488 + + K+ L ++ + E Q+ Y + +++ + + Sbjct: 473 SLEDKDKQYEFLLKNSPGEQKDLVNLKQLIVENEQKWSSYVKLNKEIDFSREEIKNLQID 532 Query: 489 --------------------------RIKTLEAQRAQLQAGQPCPLCGSTSH--PAVEAY 520 R R +L+ G CP+CGST H + + Sbjct: 533 ILSRREEEKQLEKELEEIKNTQREVMRENLAHTLRQELKDGDTCPVCGSTHHMKENIRIF 592 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL-----RQDEQ 575 + + + ++ EN +K + + ++++ ++++ + E + L + + Sbjct: 593 EVQDVKNVEEKIKLKENSIKIISSKITQGETKVNSFNEKIKVNLEEIEKLGTAFNEKPLE 652 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLD-----------AQDEHERQLRLLSQR-HELQG 623 L Q++ + +L + ++++ ++ +E +R ++ +L+ Sbjct: 653 ELKQEFINLEKALESYSKAKEELEKSVNKLRNEINIKTGEINELRAVVRTNQRQLEDLEK 712 Query: 624 QIAAHNQQIIQYQQQIEQRQ-QLLLTTLTGYALTLPQEDEEESWLATR--------QQEA 674 I + +++ + +++ + + L+T + + ++E L+ ++ Sbjct: 713 SITENTEELNILKNRLDSLRAKTLVTDFNKKSEEIKAVEKERERLSEVIKVNRELIEKLE 772 Query: 675 QSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQ 734 ++ + +E+ + + + L +S E ++N + + + Sbjct: 773 KNKENLTSEVILAKENLTRYNTELSNYEKSKEEKIQAIKNKVDNTDDLVSLLHKIQENIE 832 Query: 735 TLQQQDVLAAQSLQKAQAQFDT------------ALQASVFDDQQAFLAALMDEQTLTQL 782 + + + + K + +F+ + D++A L +D + L Sbjct: 833 NINSEFKESENNKNKIEKEFNENNERLISAISKYKELSKRKKDEEAQLEVAIDSEGFNSL 892 Query: 783 EQLKQNL-ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT------ 835 + +K+N+ + L ++ ++ + L E ++E + Sbjct: 893 DDVKKNIIGKEEINDYKLKVESYKSEVSKVNGAIESLLNKIDGKELSEKEYTEIKLLKDI 952 Query: 836 -HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 ++ E + ++ ++LK + ++Q+ L+ + ++ ++ G L L +G K Sbjct: 953 KEKEFNEINEDKIKVDEELKNIKNKLEEQKDLLDKKMKLEHKLALLGDLEKLF---KGKK 1009 Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 F +F L + A+++L + HG Y L+ + + D A RD+ TLSG Sbjct: 1010 FVEFVAVSKLKYVSVEASKRLKEITHGNYGLEVDDNS--RFIIRDYKNGGAKRDSTTLSG 1067 Query: 954 GESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 GE+FL SL+LALALS + ++ FLDEGFGTLD + L+ +++L+ ++ + Sbjct: 1068 GETFLASLSLALALSAQIQLKGTAPLELFFLDEGFGTLDDDLLEVVMNSLERIHNEKLKV 1127 Query: 1012 GVISHVEAMKERIPVQIKVKKI-NGLGYSKLEST 1044 G+ISHVEA+K R+PV++ + +G+G SK+ Sbjct: 1128 GIISHVEAIKNRVPVKLMITPAESGMGGSKVRIE 1161 >UniRef50_A5ZTK9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTK9_9FIRM Length = 1061 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 203/1103 (18%), Positives = 416/1103 (37%), Gaps = 109/1103 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+++ S E IDF + + LF ITG TGAGKTT+ DAI ALY E Sbjct: 1 MKPLRLKMQAFGSYGKETTIDFEK---VNQNLFLITGDTGAGKTTIFDAIVFALYGEASS 57 Query: 61 LSNVSQSQN------DLMTRDTAECLAEVEFEVKGEAYRAFWSQN------RARNQPDGN 108 N + D + E + + K E Y R N+ Sbjct: 58 SLNKKEGVVLQSQYVDFDSEPYVELVFSEGRDEKREIYTVRRVPRHLKTITRGANKGKPK 117 Query: 109 LQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 V L DG K + + GL +F + +++QG+F L AK + Sbjct: 118 ENTGSVSLI-MPDGMEYPSK--ETDRKLQEIVGLTKSQFMQVAMIAQGEFMDLLRAKSDD 174 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG----VTLLTPEQVQSLTAS 224 + + +L TE+Y I + + ++ E+ L+ Q G + + + ++L Sbjct: 175 KKVIFRKLFNTEMYQDIVTELGNRKRAKEKEIAVLKTQCQGEVSRIRIPETYESETLKQL 234 Query: 225 LQVLTD-EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ-----QALQQALAEEEKAQP 278 + L D E +L ++ ++ +WL + +L ++ R+ + ++ EE + Sbjct: 235 KKQLEDGEMTRLTDFLEEVEKLCDWLEKHTDLAEKDYRKSGKSRDEKREEYTRAEEVLKW 294 Query: 279 QLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS 338 + Q + +I E +A ++ IR E ++ T L A+ Sbjct: 295 FIQLEDAEQKLQECADDESKIVETTALISRIRNAYE-----IRETGVLLNDAERRLAELE 349 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 L+ Q++ L + + + R Q Q S + +++ A + LN Sbjct: 350 QSLKTQEKQLPILEETRKTAEKAEEQKKLIRDQELQSYS------KIAEKVQKALELLNQ 403 Query: 399 LAAITLTLTADEVATALAQHAEQRPLRQH--LVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + ++ + AD ALA Q+ +Q L Q Q + LA++ + ++ Sbjct: 404 IKSLRVQAEADRKNCALASENTQKVRKQQETLEQKEIQWKKQSEELAEVDKKLVLAENKK 463 Query: 457 TQRNAALNEM--------------------RQRYKEKTQQLADVKTICEQEARI---KTL 493 + +A L E+ R+ Y + T++ V T E+ Sbjct: 464 QEADAVLQEIKDVRVLGNQAEQCRKNAIKTRENYAKITEKYNAVNTEYEEVRLYFLNAQA 523 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 A+L+ G+PCP+CGS HP +++ +L ++ V KL ++ G Sbjct: 524 GFLAAELEPGKPCPVCGSIEHPHPAKKDVESVDISEEKLQNMQTNVDKLRKDQEKAAGDA 583 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 A + ++ + Q Q + + + + + ++ W E L+ Sbjct: 584 AAARSEYDTRKDTYIASVQKLQERLHRSVSSITEQSSVTEMSNALENWKQELAEELNNLQ 643 Query: 614 LLSQRH-ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQ 672 ++ +++ + +Q Q Q ++ + + A + + + + + + Sbjct: 644 RSARLLVKIREALQNMEKQKKQLQDTYDECTEKEKAAVEKLAGSEAALENVKGSVEFKTE 703 Query: 673 EAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQ 732 E + + L ++ Q + + + + + + ++ Sbjct: 704 E-----EARAALIQAESSKNQAEEVYQKVLSEAKKAANAQKQAETLISRYQQEIPEQKKC 758 Query: 733 QQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQ 792 + + + Q ++++ ++ ++ E Sbjct: 759 VEDRKTSYTEVMEIKQMTESEWKELVETYS-----------------------REAAEEF 795 Query: 793 RRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQ 852 ++ + + LAQ G +E+IQ+E + +E ++R Sbjct: 796 QKTVNAYYEKKSVALAQKDSAESAIGEEQKPVLEEIQKEREAAETEYQEKEKIYNQLRMD 855 Query: 853 LKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI-GSKEGDK--FRKFAQGLTLDNLVH 909 + D + +++ + ++ L + G+ G + + Q L+++++ Sbjct: 856 NRDDREVFDALSGRLEERKTIVEEHARIDTLYRMTSGNVSGSRMDLETYVQRYYLEHILY 915 Query: 910 LANQQLTRLH-GRYLLQ--------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 AN++ + G++ L+ + L++ V T R+ RTLSGGESF+ + Sbjct: 916 AANRRFQEMSAGQFELRMYDLEKAGEGKNRGLDLMVYSTVTGKE-REVRTLSGGESFMAA 974 Query: 961 LALALALSDLVSHK---TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 L+LAL ++D + +D +F+DEGFG+LD + + A+ L + + IG+ISHV Sbjct: 975 LSLALGMADQIQQSSAAINLDMMFIDEGFGSLDEHSRNQAVRVLQEMAEGSRLIGIISHV 1034 Query: 1018 EAMKERIPVQIKVKKINGLGYSK 1040 +K+ I Q+ V K + K Sbjct: 1035 SELKQEIEDQLLVNKDENGSHVK 1057 >UniRef50_B9DP77 Putative ATPase involved in DNA repair n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DP77_STACT Length = 1011 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 220/1072 (20%), Positives = 435/1072 (40%), Gaps = 114/1072 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L L+N+ E IDFT+ +N LF I+G TG+GK+ L DAI ALY + Sbjct: 1 MKPLNLHLQNVGPFMEET-IDFTQ--LKNNELFLISGKTGSGKSMLFDAIVFALYGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S + + E+ F++K + ++ Q + + N P + + Sbjct: 58 SSRKETALRSHFADGKSPMEVELVFQLKDKQFKVVR-QGAFIKEGNKNPTNPNLSVYELE 116 Query: 121 DGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK + KV L G+D +F + +L QG+F FL +K + E+L L Sbjct: 117 DGKYELRESKVTAGNNYIEGLLGVDIEQFRQLFILPQGEFKKFLFSKSSAKQEILRTLFN 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGV-------------------TLLTPEQVQ 219 T + + M+ Q+K + ++E Q + ++ T + + Sbjct: 177 TNRFETLQQMLVNQNKEEKKKIEARHQQIEQLWNKAEDFDDESLQAYKTLPSIQTEKLLD 236 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ ++ D K L + Q+++ + ++ +++ + E E + Sbjct: 237 AIPDFERIGKDIYKHLEKEKTQQEEVKHKAETAYRDAEDLNQKINDRKTLTDELEALEKH 296 Query: 280 LAALSLAQ-------PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 + + + + R L E I+ HS L + + E++ +Q A I Sbjct: 297 ASEIKILETKLKKIREVRPLHQIIENISAHSKKLDELNVKCEKIEHNIQQYQASLQKITD 356 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA 392 A S E + ++ ++ E F Q ++ + + E Q ++ L Sbjct: 357 EQAALS-EAEDDIEAKRKFINETQYFYQ---NIKQYQIAYDSKNQVHEDYNQSKKDLNDN 412 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 EQ L+ + A+ D L Q +Q + + + + +++ Q ++ + Sbjct: 413 EQLLDEMKAVHQNERPDY--ERLHQLTQQLFDLKQEIKDTKEAIEKKEEYDQRVKKLKAL 470 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 QE TQ NE+++ + QEA IK L+ + LQ G CP+CG+T Sbjct: 471 EQEMTQNMRKSNEIQEAISQFNTNQL---EFDNQEAMIKKLQ---SMLQPGDQCPICGNT 524 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 + ++ +L A + ++ L E +R + + +NE Sbjct: 525 -------IDSPSDHLDFEQLKAQKEKLNDLNENKEAIRAAYSKLEAEYSMLKNETDKFEH 577 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 E P ++ Q D ++++E+ + + +I QI Sbjct: 578 QEV------------------PENNEQILADLKEKYEKTEADKKHQEKRNKEIEKKQTQI 619 Query: 633 IQYQQQIEQRQQLLLTTLTG--YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 + +++I+ Q L L + E + + + +++ + A Q + Sbjct: 620 QEIKEKIQNLQLALTQKKAESEKINRLIEAFENGTTFNKINDFIKGFSEKEEAVKAHQTK 679 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 I+ L Q+ + + +N ++ ++ L Q Q+ Q + + Sbjct: 680 IEALKQQETEAKQNIAVEQTKFKSAQDNRKETQKEKTNLEQQSQSEMQNIGIQS------ 733 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 D+ + LM E+ Q+E+ ++ ++ + + + Sbjct: 734 -------------TDEVQEILDLMPEKE--QIEERIKSYHEKQNNLSHKIAELKALIGNQ 778 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + +E++ + L +L E + E +++ + N ++ + + + Sbjct: 779 E----------KPDLEKLFKNLELQKTELEEKSKRLNEHEFKMQLNTSNFKEIKEHIDVL 828 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR- 926 + + ++ L ++ K K + L+ ++ AN++ ++ + RY+L+R Sbjct: 829 EKELSEQQEIFDLAEVLSGKNIQKLTLENYVLVYYLEMILEFANKRFMKMTNNRYILKRS 888 Query: 927 ----KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 + LE+ V D+ ++ R TLSGGESF SLALAL LS++V S ++S Sbjct: 889 DVVTQGYSGLEIVVFDSH-SNKTRHISTLSGGESFQASLALALGLSEVVQQESGGITLES 947 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 +F+DEGFGTLD ETL+TALD L + ++G+ +G+ISHV +K+RIP ++VK Sbjct: 948 MFIDEGFGTLDQETLETALDTLLNIKSTGRMVGIISHVSELKQRIPTILEVK 999 >UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8J8_HYDS0 Length = 961 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 221/1051 (21%), Positives = 430/1051 (40%), Gaps = 99/1051 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ S K + +DF+ LFAITG TGAGKTT++DAI ALY + PR Sbjct: 1 MRPLVLELEGFLSYKEKTVVDFS-----DLSLFAITGMTGAGKTTIIDAITFALYGKCPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S+ D +++ + F + + Y +N V L Sbjct: 56 FEKGA-SKEDYISKGKDFFRVSLTFSLNDKTYTVGRYLKSGKN--------IVVSLKENG 106 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN-AKPKERAELLEELTGT 179 I +K K + E + +DY FT+ ++L QG+FA F+ P+ER E++ L+ Sbjct: 107 KEIITEEKNKLREERIKEILNMDYDTFTKVIVLPQGEFAKFIKPESPQERREIIMRLSNL 166 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + ++ + Q K + E++ + + E V+ L L L E + + Sbjct: 167 DKIDKMRELAASQKKDLKNEIDSISLTIDNLKS-NQENVEELQKKLDSLEQELSVKTSEK 225 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + + ++ EL+ E S+ + ++EK + + +P +L+ ER Sbjct: 226 KVLLERFEKAKKKQELKNELSKLMIEYENLENQKEKMELIKKRIEFLKPKLSLKSDIERY 285 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + L ++++ N + + A+ +Q + + + Sbjct: 286 IKLKNELEKTTLELDKKNKEYFLKEQEYNKLLINFETIKADYEQTKYQEERVERGYKIIS 345 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 N + S T+D +R +QQL +++ + L A E + Sbjct: 346 ILENAL----SIESYITNDEARIRDLEQQLKTKKEEKSKLLAEIEHY---ENLSKEENKE 398 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 ++L A+ Q+ ++K + + + + +E N L + ++ + Q+L Sbjct: 399 AIEKDIENLTAIISQLELKEKEKDKKLLEQKKLMEEVDNINKELLKYKEEQRNLDQELNA 458 Query: 480 VKT--ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 K + +KTL L+ CP+CG H E L+ V + + +E+ Sbjct: 459 NKNNIVLYYSNMLKTL------LKENDICPVCGGVYHEK-EHTTMLDIEVEEDIIKNIED 511 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 K+ L+ + +A+ K + E+ + L + E ++ L + Sbjct: 512 IKSKIALSEDRLKSKKEALEKLSEEIESLEKELLEKETLQSR---------------LKE 556 Query: 598 IQPWLDAQDEHERQL-RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 ++ + QD ++ L +L S++ +L+ +I N+Q ++ + +++ L T Sbjct: 557 LKQRREFQDNIQKNLEKLKSKKDKLENEILLLNKQKEGLEKDLYNKKESLKT----LEKE 612 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 L +E L ++ + Q +N+L ++N IQ I E Sbjct: 613 LLSYGVKEGHLQNKKN---AIDQYKNKLDEIRNEIQNKRKIYEDTK-------------- 655 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 E + + L Q +L + ++ L + + + + Sbjct: 656 EMINTYEKSIMLLKEQVSSLSVKKSTISEELNELETKLSSI------------------- 696 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD-GLALTVTVEQIQQELAQT 835 + ++ + LEN R + + + Q Q + + ++++ L Sbjct: 697 EDKEKVLEELNRLENYERTYNEYMVKLSNLKEQIQLKENEIVNITEEAPPQELENMLEVL 756 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF 895 + ++ G I ++ Q +N +Q + L + I + ++ + L + S D Sbjct: 757 EEYVKTLNQEIGSISSKINQAKENEKQIKELEETIKDLEKKYNIYERLEQDLKS---DAL 813 Query: 896 RKFAQGLTLDNLVHLANQQLTRLHGRYLL--QRKASEALEVEVVDTWQADAVRDTRTLSG 953 + + ++ LV AN +++ YL + K+ E + V D + R ++LSG Sbjct: 814 QAYISQKIIEELVKYANVYASKMEFPYLFKVEEKSREKDSIVVEDAF--GNTRPIKSLSG 871 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIG 1012 GE+F+ SL ALALS+ V K + SLF+DEGFGTLD ETL+ +AL+ L+ + K +G Sbjct: 872 GETFITSLCFALALSEAVGSK-HLKSLFIDEGFGTLDKETLEKVGNALELLSQNINKMVG 930 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 +I+HVE++ E+ P ++ V K G SK+E Sbjct: 931 IITHVESLAEKFPNRLIVTKTK-DGSSKIEV 960 >UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus aureus RepID=SBCC_STAAC Length = 1009 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 196/1085 (18%), Positives = 426/1085 (39%), Gaps = 121/1085 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+L N E +IDF++ +N LF I+G TG+GKT + DA+ AL+ + Sbjct: 1 MKPLHLKLNNFGPFLKE-EIDFSK--IDNNELFLISGKTGSGKTMIFDAMTYALFGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 EF++ Y+ + + + + ++ Sbjct: 58 EQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIK-EGNTTKTNAKFDVFEMV 116 Query: 121 DGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK I KV + L G++ +F + +L QG+F FL + +E+ +L L Sbjct: 117 DGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFLISNSREKQGILRTLFD 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQAS---------------GVTLLTPEQVQSLTA 223 +E + I ++ E+ K + ++E Q G+ + +Q+ L Sbjct: 177 SEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDDNIKGLLEVATQQIDKLIE 236 Query: 224 SLQVLTDEEKQLITAQQQEQQSLN---WLTRQDELQQ--------EASRRQQALQQALAE 272 ++ +L K+++ + + +++ + + L+ + ++ + Q + Sbjct: 237 NIPLLQARSKEILASVNESKETAIKEFEIIEKKTLENNILKDNINQLNKNKIDFVQLKEQ 296 Query: 273 EEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 + + + A L L Q NL + E + +A+ ++ I + N ++ + + +I Sbjct: 297 QPEIEGIEAKLKLLQDITNLLNYIENREKIETKIANSKKDISKTNNKILNLDCDKRNI-- 354 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA 392 K+ L++ + + + D+ R N+ ++ + R Q +L Sbjct: 355 --DKEKKMLEENGDLIESKISFIDKTRVLFNDINKYQQSYLNIERLRTEGEQLGDELNDL 412 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 + L + +D + + + + + + + L +L + Q + Sbjct: 413 IKGLETVEDSIGNNQSDY--EKIIELNNTITNINNEINIIKENEKAKAELDKLLGSKQEL 470 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 + + + L + + + D+ ++E+ I ++ + + G CP+CG+ Sbjct: 471 ENQINEETSILKNLEIKLDRYDKTKLDLN---DKESFISEIK---SAVNIGDQCPICGN- 523 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 Q L ++ + +NE+K++ ++ + +++ + ++ Sbjct: 524 ------EIQDLGHHIDFDSIAKRQNEIKEIEANIHAIKSNIAVHNSEIKFVNEKISNINI 577 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL-LSQRHELQGQIAAHNQQ 631 Q+ SL + + L + + L+ Q + + + ++ L QI + Sbjct: 578 KTQS--------DFSLEVLNKRLLENENALNNQRDLNKFIEQMKEEKDNLTLQIHNKQLR 629 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + + + +++ L +T + + + + + + + + Q N+ L I Sbjct: 630 LNKNESELK---------LCRDLITEFETLSKYNNITNFEVDYKKYVQDVNQHQELSKEI 680 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + D+L + ++E +Q +T L QS++ Sbjct: 681 E------------DKLMQLSQRKLIE-----QNNLNHYENQLETYNNDLELNEQSIEMEM 723 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 ++ + D + +LEQ + + + + + + + + Sbjct: 724 SRLN-------LTDDNDIDEIIAWRGEQEELEQKRDTYKKRYHEFEMEIARLESLTKDKE 776 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 D +++ E K+ + Q +N + Q+++ I Sbjct: 777 LLDSD----------KLKDEYELKKGKMNTLIDEYSAVHYQ---CQNNINKTQSIVSHIN 823 Query: 872 QMTQQVEDWGYLNSLIGSKEGDK-----FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ 925 + Q+++D + L G F LD ++ AN +L + RY L Sbjct: 824 YLNQELKDQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRYQLI 883 Query: 926 RKAS-----EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRI 977 R+ + LE++V D ++ R +LSGGE+F SLALAL LS++V S + Sbjct: 884 RREAVSHGLSGLEIDVFDLH-SNKSRHISSLSGGETFQSSLALALGLSEIVQQQSGGISL 942 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 +S+F+DEGFGTLD ETL+TALD L L ++G+ +G+ISHV +K RIP+ ++VK Sbjct: 943 ESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVKSDQYQS 1002 Query: 1038 YSKLE 1042 ++ + Sbjct: 1003 STRFK 1007 >UniRef50_D2LF16 Exonuclease protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LF16_RHOVA Length = 1022 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 220/1085 (20%), Positives = 389/1085 (35%), Gaps = 103/1085 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ G +DF GLF I G TG+GK+++ +A+ AL+ E + Sbjct: 1 MKPIYLVIQAFGPFAGRHVVDFRHAL--DCGLFGIYGSTGSGKSSIFNAMTFALFGEAVK 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S E F + YR S + R G AR Sbjct: 59 EKVDNASLRSHHAAPNLPTQVEFVFAIGDHQYRVARSPEQERPAKRGGGTTSEPHRARLF 118 Query: 121 D--------------GKILAD-KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D G ++A+ KV+D L G +F + +LL QG+F FL A Sbjct: 119 DVTGKPAEALNDEAPGSLIAEGKVRDVNLKVEALLGYKAEQFRQIVLLPQGRFETFLTAD 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 +R +L EL +Y I+ + E+ A E+ + + G+ + + Sbjct: 179 TSQRMGILRELFDVSLYRSITERMKERADDAEKEVRRQRDVCEGLLQ------SAGFTGM 232 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 L ++ + + + L Q A + ++ + A L L Sbjct: 233 DALAIGIEEARKNVELKLEELTACKAQGAAAFAALQTAAQQDKSFQQYAAAISALNGLKQ 292 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVN---TRLQSTMALRASIRHHAAKQSAELQ 342 A ++ A + L Q+ L +A ++R A K A+ + Sbjct: 293 KADAFAVKRERVSSARKAQTLVAFDDQVRIEQKGVADLAEALANARALRSAAEKNYADRE 352 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 + L E ++ R + R + R+ L L L+A Sbjct: 353 KAHALLAGRKDEFEQKRVRERDLLKHRETLLGTAAHRDELTSAIAALDATNTTLDA-GTR 411 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 T DE +R + L I L + + ++E A Sbjct: 412 AATRARDEALRCQNALDAERGNQVQRAGLRASIAGLNADL-TAALTFETKSREIATAKAG 470 Query: 463 LNEMRQRYKEKTQQLADVK---TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 L + + ++ L K T E +L G+PC +CGS HP+ Sbjct: 471 LTRQTAAFDDASRSLEAAKAAMTDAESALFRNHAALLAGRLIDGKPCLVCGSLHHPSPAE 530 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 +E +++ + + R +L Q + A R QA Sbjct: 531 GG---------------DESERVAADYESAREKLRVA----QDHYDRASVARATAQAHHA 571 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 Q A L Q ++ L A + ++L + L+ + + + I Sbjct: 572 QIARNLAELKAPAQASTQLRDTLQAAEASLKKLGVDRDLAVLEATLGKAQAAVAKADSDI 631 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ---LTP 696 E +Q T AL Q+ + LT++ N ++ L Sbjct: 632 EAARQARDAAETCKALAN--------------------QRLEQALTSIPNDLRNSPALDR 671 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 ++ ++ + E + E +A + A + L AQ+ FD Sbjct: 672 AIDEAKRAIQQYDASLRAAEEAKDKAKEAFIAADRDATNAESNLAEARRKLAAAQSAFDE 731 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 A A+ + A+ A+ ++ LE+ + A V + E A +RPD Sbjct: 732 ARAAAGLSPE-AYQASKPFIASIEALEEDIRRYATAVAIASEDVRKAEE--ATKDLNRPD 788 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 ++ +++ Q + + + R L+ ++ ++ + ++ + Sbjct: 789 --------IDALKKAHDGAEQAQKFADEACHDARHVLETREKLQKDVTARLRHVEKLEAE 840 Query: 877 VEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK------ 927 L + K+G K FA G D ++ AN ++ + RY L R+ Sbjct: 841 TAPVRELARYMSGKDGAKVDLETFAIGAMFDRVLEAANARMRPMTANRYTLVREPETKGA 900 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 + L + V D + R T TLSGGE+F+ +LALAL LSD+V + R+D++F+DE Sbjct: 901 GRKGLGLCVDDIYTG-RTRPTSTLSGGETFIAALALALGLSDVVESTNGAIRLDTIFIDE 959 Query: 985 GFGTLDSE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 GFG+LD++ TLD L AL L + +GVISHV +++ IP ++ + S Sbjct: 960 GFGSLDADNESGTLDRVLTALHNLAGQTRAVGVISHVPLVRQHIPNGFEI--VPAANGSM 1017 Query: 1041 LESTF 1045 +E+ F Sbjct: 1018 IEARF 1022 >UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1C0_9CLOT Length = 1172 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 209/1188 (17%), Positives = 453/1188 (38%), Gaps = 158/1188 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L +K LNS + IDF E GLF I G TG+GK+T+LDAI L+LY R Sbjct: 1 MRPIKLEIKGLNSYVNKQTIDF--EKLTERGLFGIFGKTGSGKSTILDAITLSLYGSIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + + + EFE+ Y + R++ G + + Sbjct: 59 ------NTKEYINSLSEKAEISYEFEIGSRRYVVDR--HIIRSKAGGIKTSYARVIEKLG 110 Query: 121 DGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG +LADKV + E + GL FT+S++L Q +F FL +R +LE + Sbjct: 111 DGSENVLADKVNEVNETIIKIIGLTANDFTKSVVLPQDKFNDFLKLGGIDRRNMLERIFN 170 Query: 179 TEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG+ + V + +T ++ LQ S +T E+ + L++ ++ + Sbjct: 171 LEKYGKKLIENVRHRKNKTKTHVDMLQVSLSHYEEVTDEKYDEMIKKLEIDKEDCRVKNR 230 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 +++ + + E Q+ + ++ L+ ++E+ + + +S A+ A + P+ + Sbjct: 231 LYKEKVEKYDIDKIIYENQKRYNEAKELLKVYEDKKEEIEEKRKKMSRAENANMIDPYID 290 Query: 298 RIAEHSAA-------LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ----- 345 + + L I ++I + L+ + A I L + + Sbjct: 291 NVEKLRKQFEDSKNQLKIIEEEIRLIKKDLEISRGKFAEIERKKDDTIPRLSEDKVKFER 350 Query: 346 -----QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE-------------------- 380 + N + R + + + + + D + Sbjct: 351 AIHLLEETNKLSERLTRLKVEGEKLESKKKELLKNIEDIKAQQNLYAGKIKDSENRLYEI 410 Query: 381 ---------------HLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLR 425 H+++ + E+ L + + +A L ++ ++ Sbjct: 411 NVPAAFRQNIEKGYSHIKELNEVKKELEKSEIDLQKCEAEYSENNIALKLVGR-DRASVK 469 Query: 426 QHLVALHGQI-------------------------------VPQQKRLAQLQVAIQNVTQ 454 + + + +I ++ LQ + + + Sbjct: 470 ERIEEVENRINIMIKNSPLTAEEITKKTEYVTEMKSELKTLKQLEEERDNLQHELNDCLE 529 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 ++ + + ++ R + + + K E+ + + R +LQ G+PCP+CGS H Sbjct: 530 KRHRVSREISTSEDRLSKVRKDMETAKKNIEEFRYLNRVSDIRKELQDGKPCPVCGSLDH 589 Query: 515 PAVEAYQALE-----PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 ++ + G+ E+++L G + + + + Sbjct: 590 MRTDSTNYDDRIEYYEGILNKEKANEREEIERLDSLKIKRSGYISEEKIKTEAINKKKAE 649 Query: 570 LRQDEQA-LTQQWQAVTASLNITLQPLDDI--------QPWLDAQDEHERQLRLLSQRHE 620 + + L++++ + T +L + + D + +D++ R + ++ E Sbjct: 650 IGERNSIELSKKYDSETRNLEAEKRAVSDWNIEKDRLEEDLKRYKDDYSRNDKEFTRIDE 709 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 L I + + +++ ++ L + + + D+ S L + + Sbjct: 710 LLKGIMRRRLSLSENVSELKSKKDNLELEIVSIKR-ITKVDDIFSKLEEIKANEIESENV 768 Query: 681 QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 + EL+ +N ++ + S E + + +++ +Q + + Q + + Sbjct: 769 EKELSEFRNIKFEIDKEFDDCKTSIHSIEVEISSIEKDFEGNKKQYIEKTDEAQRITR-- 826 Query: 741 VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQ----NLENQRRQA 796 L + Q + +S D ++ F + L Q E Q Sbjct: 827 GKNPNELLEKTEQEINKINSSYADLKKEFDDKSKAREDKDSLRSKVQGECNTTEEQLDYY 886 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 + ++ + + TV +E +++E++ + + ++ ++L Sbjct: 887 KKVLKDMLAKYRFDSAYTVKKFVMPTVDIEIMRKEISDYDEGRKNLDFKIDDLEKKLDGR 946 Query: 857 ADNRQQQQTLMQQIAQMTQQV-----------------------------------EDWG 881 ++ L ++I + ++ D+ Sbjct: 947 KVKEEEFDRLNEEIVLLKDEIGELEKNNAVLFDRITAMKKDLEKKKKIKSEYDEVSNDYR 1006 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTW 940 L+ + +G+KF ++ L + A+++L+ + +GRY L+ ++ALE + D + Sbjct: 1007 LLDEIDRIIQGNKFVEYVATNHLKYIALEASKRLSTITNGRYALE--INDALEFVMRDNF 1064 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTAL 998 R TLSGGE+FL SL+LALALS + ++ FLDEGFG+LD E LDT + Sbjct: 1065 NGGERRGVDTLSGGETFLTSLSLALALSSQIQMKGNAPLEFFFLDEGFGSLDVELLDTVM 1124 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 ++L+ L++S +IG+ISHVE +K R+PV++ V SK++ ++ Sbjct: 1125 ESLEKLHSSNLSIGIISHVEELKNRVPVKLVVTAGEIGEGSKVKIEYS 1172 >UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0JY32_ARTS2 Length = 1023 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 232/1086 (21%), Positives = 395/1086 (36%), Gaps = 112/1086 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L + G IDF R +++GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLEISAFGPFAGTEHIDFDR--LSAHGLFLLNGATGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRA----FWSQNRARNQPDGNLQVPRVEL 116 + AE EF KG + W++ AR + Q L Sbjct: 59 ARQEGKRLRSDHADAAAEPRVTCEFSAKGRHFEVSRIPAWNRPSARGRNGFTEQKANTLL 118 Query: 117 ARCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 DG+ + + + +++ G+D +FTR ++L QG FAAFL +KP ER ELL+ Sbjct: 119 RERVDGQWIEKSGRNDEAGAEISSVLGMDREQFTRVVMLPQGDFAAFLRSKPAERLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD--EE 232 L GTE + + + + AR ++ L +Q + +V L + E+ Sbjct: 179 SLFGTERFEAVEQELARRAADARAQVASLNSQLDLLLAQARSEVTPPEQELPDVPAAPED 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 L+ Q+ + +T E + A+ R A ++ A E A Q+ + + Sbjct: 239 ADLLLEWLQDTAAARAVTAHAEADEAAAGRAGAARRLEAAEAHAARQVKLAAAERRRSAA 298 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + + + L + ++ E + +LQ+ + A +A + + + ++ Sbjct: 299 DAAAPELRDKARQLG-LHRKAEVLGGQLQALDKADIAEERAARAMAAAVDELRAAVLVDA 357 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN---------ALAAIT 403 + E F R L + + E++L A A Sbjct: 358 ELAALSAYARQESGSADEHFFDAAVVRSELSRLRSLRAVLEERLPDEARLSGMVARGAEL 417 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT---------- 453 + A A LR L + P ++ A+ Q+ + Sbjct: 418 RKTLTELRERRRAGAAALEGLRAEAAELLAGVKPLEELAAEAQLRTKEAAAAEELVAVVG 477 Query: 454 --QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 + ++ + E + ++ Q +E +QL+ +PCP+CGS Sbjct: 478 RHAAAVRVSSGVAERHRLARDDHQNHRQRWLDLREERLANAAAELASQLRPTEPCPVCGS 537 Query: 512 TSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLR 571 HP+ V + A E A + Sbjct: 538 PEHPSPAPAATAALAVADAERAAQEACEAAEAVLAALGKE-------------------- 577 Query: 572 QDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQ 631 + + + A L L + DA ER + +AA ++ Sbjct: 578 ------LAEARQLVAVLAAQGGDLPLEEARADAAQAKER----ADEAVRAAADLAASRER 627 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + + I+ + +G A T E L + + + L +R+ Sbjct: 628 QAELDEHIDAAESAQAAADSGMAKTESTLMEV---LEQTDALDDALGKLRAGYPTLGSRL 684 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 L L ++D E A + A+ Sbjct: 685 SSLDESTALLERTDAARSGLEQ-----------------------------AGLRTRDAR 715 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 Q D AL S F+ A + L+ LE + +++ + L LA + Sbjct: 716 QQLDKALPESGFESAAAARSVLLPVPEAAMLEAAIRAGQDEEARVGELFASEELILATRE 775 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 DDG +EQ++ E A + R+ + G + + + L Sbjct: 776 LE--DDGPVEASVLEQLRAEDAAAERMARQAVVAAGLAEKSVLTLRRIAEDYGRLAASGQ 833 Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRYLLQ- 925 ++ + + +R + L+ + A+++L + GRY LQ Sbjct: 834 GPRERAALLTAVAEAARGAGDNTYRMSLNSYVLAARLEQVAIAASERLVGMSDGRYTLQH 893 Query: 926 ------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTR 976 R A L +EVVD W RDT TLSGGESF+ SLALAL L+D+V S Sbjct: 894 TDAKAARGAKSGLGLEVVDQWTG-HRRDTATLSGGESFMASLALALGLADVVQQESGGVD 952 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 I++LF+DEGFG+LD + L+ +DAL+ L G+ +G++SHV MK+RI Q++V K Sbjct: 953 IETLFVDEGFGSLDEQALEQVMDALEGLRDGGRVVGLVSHVPEMKQRISTQLQVVKGRNG 1012 Query: 1037 GYSKLE 1042 + Sbjct: 1013 STLHIS 1018 >UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R3_ABIDE Length = 1064 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 180/1099 (16%), Positives = 398/1099 (36%), Gaps = 98/1099 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ S +IDFT+ + LF ITG TGAGKTT+ DAI AL+ E Sbjct: 1 MRPKKLVMQAFGSYGKNTEIDFTK---SKQHLFLITGDTGAGKTTIFDAIVFALFGEASS 57 Query: 61 LSNVSQSQN--DLMTRDTAECLAEVEFEVK----GEAYRAFWSQNRARNQPDGNL----Q 110 N + E E F K E Y+ R G + Sbjct: 58 GYNKKSGEELQSQFVDYGNEPFVEFTFTEKVGSTEEEYKVRRIPKHIRPYKKGREGYTDE 117 Query: 111 VPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 +V L D + +K+ + L +F + +++QG+F L ++ Sbjct: 118 KEKVSLF-FPDNTEYSQNLKETNSKIEEIIKLTKNQFMQVSMIAQGEFMEVLR--GSDKQ 174 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV--TLLTPEQV---------- 218 + +L TEIY I + + +T L++ +Q + + PE + Sbjct: 175 AIFRKLFNTEIYQNIIKELKLKSDDKKTLLKEFTSQCKLLISGIRVPEAMREGYNFFDTK 234 Query: 219 -------------------QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEA 259 + L ++ E+K+L + ++ + L + L E Sbjct: 235 KETDITDIEKARLSLFNLCKELNKIIKTKETEDKELFAKRDKKTRELAEGEQLLGLFAEL 294 Query: 260 SRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 + + +++ +++E+ + A + E + +++ ++ Sbjct: 295 EKAELEVKELESKKEEIVKLTKLAKDIEAAYEINNCHTGFVEADKSFLEAATELKLKKSK 354 Query: 320 LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR 379 L + + N ++ + + N + + + ++R Sbjct: 355 LPELTLNYEDLCKKEEVAKMGYSTAVEEFNRISEKVRKNLESFNNIEARKKDKTGKEAER 414 Query: 380 EHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 E + +++ + +L E++ ++ ++ Sbjct: 415 EKAAKEREEAKLRLENFESLEQSWNEA-VKELSVFEKMYSVAENKVHSCEKADNELKALT 473 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 + + +L + + + Q N R+K +L + + ++ R Sbjct: 474 EAVRELALEKNKLKKYQNAYEVEFN----RFKSAEDELISKRRLFYD---LRAGIIARDL 526 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+ G+PCP+CGS SHP+ E + + + LE V L ++ T +L+ + Sbjct: 527 LKEGEPCPVCGSVSHPSPCKLTEGEDEITKEEVDKLEERVSGLKDKVNTGLSKLEGCKIK 586 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 + T++ +TA ++ +++ + + E L Sbjct: 587 I-----------------TEREGYLTADKKKLIRLINEELFAFECETSGEDNTDLEKLGA 629 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 ++ H +++ + +I++ + + +++ + + + Sbjct: 630 GIKLFSDKHQKELSELDIKIKEIKSIEEK-------LSTAGEKKNLLRQAEEAAREKEAE 682 Query: 680 RQNELTALQNRIQQLTPILETLPQSDEL-PHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 EL+ + + I++L LE + + L + V+++ + ++L++ Sbjct: 683 TAKELSGIDSVIKELEAGLEYNTKEEALEAEAVKEREKIKTETVYKEFENKAKEAKSLKE 742 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA-- 796 + L+ + ++ + + E + + + +E Q+ Sbjct: 743 RTETLIVKLEADLPLLEKTVETKRLEYANTMENKNLSENEWQDIVKEHKKIEKDEFQSII 802 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 T + + + + V ++Q+E + + T E+R + K D Sbjct: 803 NTYAGNKTASENMVIKMKEATKDKVKPDVSELQKEFESVEEAYKNLHTELEEMRAEYKTD 862 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYL-NSLIGSKEGDKF--RKFAQGLTLDNLVHLANQ 913 D ++ + + + +++ L L G+ G + F Q L+ ++ AN+ Sbjct: 863 EDILKKLDSALAERGAASEEYGIINNLYAKLSGNVSGARMDIETFVQRKYLEKILVSANK 922 Query: 914 QLTRLH-GRYLLQR--------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 + + G++ L+ + L++ V RD RTLSGGESF+ +L+LA Sbjct: 923 RFANMSAGQFELRTYGLEKAGEGKNRGLDLMVYSALNG-KCRDVRTLSGGESFMAALSLA 981 Query: 965 LALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 L ++D + S ++ +F+DEGFGTLD + + A+ L + K IG+ISHV +K Sbjct: 982 LGMADRIQERSGAVNLEMMFVDEGFGTLDDNSRNQAVKILKNMAGGSKLIGIISHVSELK 1041 Query: 1022 ERIPVQIKVKKINGLGYSK 1040 + I Q+ V K ++ Sbjct: 1042 QEIEEQLIVTKDENGSRAR 1060 >UniRef50_C6XKD1 SMC domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKD1_HIRBI Length = 1022 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 205/1082 (18%), Positives = 404/1082 (37%), Gaps = 100/1082 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L+ G+ I+F + GLF I GPTGAGKT++ D +C AL+ ++ Sbjct: 1 MRPIRLTLQAFGPFAGKEVINFEQT--FDVGLFGIYGPTGAGKTSIFDGLCFALFGQSSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + E+ F++ + Y + R G ++ A Sbjct: 59 AQRDGKDFRSDHAPLDMLTEVELVFDLGDKRYVVRRIPAQERLAKKGGKTTQQLHQAWLF 118 Query: 121 D--------------GKILADKVKDKLEL-TATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D GK +A+K +E + L G +F + +LL QGQF L+A Sbjct: 119 DASGLNTQDITDANRGKAIAEKKTSVVEQTISELLGYSADQFRQIILLPQGQFRKVLDAN 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-EQVQSLTAS 224 K+R+++L +L +Y ++ + E+ K+ ++ + + + + E ++L + Sbjct: 179 TKDRSQILRQLFDVSLYEKLQDKLKEEAKALHEKVNTARIRRDDRLMQSGHETFEALELA 238 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ ++ K+ A +++ + E + R L++A A+ Q + + Sbjct: 239 IKEAHEQVKKSQAALDAAKKNHSTKRDTLEKAKSNDARFVELEKAKADLITLQANQSDID 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIR---QQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + E + A L+ + ++ + + + A + ++ Sbjct: 299 ARKADLEKVRRAESLLGLEAGLSRAKLDHKEASQRQIEAKVNLEKAEKANASAKVKLTDI 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q+Q + + ++ N + + + + + Q A+Q+ AL Sbjct: 359 QKQTSEIQALSETQNQLNALLNIQKSTISLATDLKTKTDQRKTSHAQANAAKQEQAALKT 418 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQI------VPQQKRLAQLQVAIQNVTQE 455 L+ A+ + + + + L+ +I QK+ L+ ++ Sbjct: 419 HLKELST-SAKNAIERGKTIANIEKEIERLNTEIAANSVYENAQKQTQNLEAKFKSSQAN 477 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 A L + Q LA+V+ + ++L+ G CP+CGS HP Sbjct: 478 HLASKAKLENAQTELDVAEQALANVQAL-----------HLASKLKHGDNCPVCGSKDHP 526 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 + A G++ + A E K GEE L ++ Sbjct: 527 KLAKGDASSQGLD-TAFRAAEKAYKIAGEEERKANDAL------------------IADK 567 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 A + + L D ++ L ++L L + +I+ ++ I+ Sbjct: 568 ANYNSSLELFSKLEKPKTESDALKSALHDHSIELKKLNDLPTLEAINQKISLIEREEIEV 627 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 ++E E E + ++ + +L Sbjct: 628 SNRLETI-----------------LVEHEKNQLAHNTAQSRYDDAIAKIPTDYQTVGKLE 670 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 LET + E + R+ + Q+ + A + + A F+ Sbjct: 671 KELETNKSKIDGFKKELENAEISERETASILSNAQTSLNDKQETENRALKRVNSETANFE 730 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 +AL + D+ +F AA + + + +N +T + Q Q+ Sbjct: 731 SALIEAKL-DEASFQAAKLLFPKRDAISKAVENHSAALISVKTRIEQAKLATQNVQRE-- 787 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 + +Q +++ ++ + + Q+ + Q Q++ ++ Sbjct: 788 --------DLTILQHQVSTAETEVDHASNILNTVTQRQLHLKTTLESVQKATQELNKLNA 839 Query: 876 QVEDWGYLNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASE-- 930 + G ++ L K FA D+++ ANQ+L + R+ L+R+A Sbjct: 840 EYAPLGEMSDLTNGTNPYKLKLVDFAIAAMYDDVLDAANQRLGPMTDSRFELRREAGGQG 899 Query: 931 -----ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 L+ + D +++R T +LSGGE FL SLALAL LSD+V S R+D++F+ Sbjct: 900 GNASRGLDTLIFDAHT-ESLRATSSLSGGEGFLASLALALGLSDVVQQQSGGVRLDAIFI 958 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFG+LDS LD AL L L + + +G+ISHVE +K IP ++ + KL Sbjct: 959 DEGFGSLDSAALDLALQTLHTLADNNRLVGIISHVEEVKRTIPNGFSIEPSTAGSHIKLR 1018 Query: 1043 ST 1044 +T Sbjct: 1019 TT 1020 >UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0WRN7_LACBU Length = 1045 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 221/1073 (20%), Positives = 419/1073 (39%), Gaps = 63/1073 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L LKN + E IDFT+ +F I+G TG+GKTT+ DA+ ALY ++ Sbjct: 1 MKPLKLTLKNFGPYENE-IIDFTK--LDEASVFLISGKTGSGKTTIFDAMTFALYGDSAS 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 QS + FE +G+ YR + ++ G ++E Sbjct: 58 DDRTPQSMRSDFADTKTPTEVTLLFEHQGQTYRINRFPKQELDKKRGTGTKIFESSGKLE 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + K++D + + +F + +LL QG+F FL A ++ ++L + Sbjct: 118 IFKDGKKADEMTKMRDINLKLLDVLQISREQFVQIVLLPQGEFRRFLTASSSDKEDVLRK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQA-SGVTLLTPEQVQSLTASLQVLTDEEKQ 234 + T++Y + S + + K T+ + + + + + + D+ Sbjct: 178 IFRTQLYQRWSDALRDMLKKQNTKNKDAKQAIDNDLAKVVWLDDAPDDVKARNANDQIAI 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ-PARNLR 293 L Q Q L L Q + Q+ A E + QLA Q + L+ Sbjct: 238 LSQQQSQANTDLKDLKAQHQSAQKRYEEANQKFHADGEMNRQINQLADQRHQQVDLKALQ 297 Query: 294 PHWERIAEHSAALAHIR---------QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 P ++++ E A L + Q+++ + Q + K + +Q Sbjct: 298 PQYDQLREQVAQLEWAKDLKPKYEQFQELQSDVSNDQRKLKEVNETSQTQTKALEKQSKQ 357 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 Q +L E ++ + R F Q + R+ L+Q + + +KL Sbjct: 358 QINLQAEKPEQEQRLSQKSVLENQRPIFKQASELRDQLKQAKAVVEKTGRKLETKQKRVA 417 Query: 405 TLTA--DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 LT D++ L Q L + K+L +L + Q + + + + Sbjct: 418 DLTKQNDQITEKLTQVVGLTEQLNELTQTFQTLETASKQLTKLDLDQQTNHELKVRIGHS 477 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 NE+ + + + + QL+ G PCP+CGST HP+ Sbjct: 478 QNELLELTTQVDHAQTAYTALRNNW-LSNQIVNLVKQLEPGSPCPVCGSTDHPSPAHVAD 536 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 L P V+ + E +++L + AT R +++ KQ + + +Q + Sbjct: 537 L-PHVSDDDIKTAEAHLQQLQNQQATDRTKINEQVKQSDKQD------QQINSTFKELVA 589 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + A + P D++E+ LR + Q + A ++ + +Q ++Q Sbjct: 590 ELMAEHILQETPDSLAAVSQQVADDNEKNLRERHVIQKQQDDLKAEQEKQVHIKQDLDQL 649 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + Y + + + L A ++L +L + +L + Sbjct: 650 MPQVDQLKADYQNAQSTQQKYDVRL---DDVAHRLPSEFSDLASLDQHLGKLQQAIADYD 706 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 Q+ E + ++L Q + + + + A L+ Sbjct: 707 QAVETNRNQLENTKRTLAASQATEISLKKQIDHTRGKIDVIQNDITAA------VLKKFG 760 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 ++ + L L++ + ++Q + ++ + + +HQ Sbjct: 761 TKSWDMLEKSVKNVSQLADLQKQIDHYQDQLKNVAASISTYEKIVGEHQ----------L 810 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 V +++ Q +LAQ Q + E +Q + + ++ + I + + Sbjct: 811 VDLKEEQTQLAQLVQARDQLQDQYDEKYRQTLINDELLKRVKKNDHAIHDQQETINQLQL 870 Query: 883 LNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEAL 932 L + K ++ L ++ +ANQ L +L GRY +Q + + L Sbjct: 871 LVETVNGSGDAKLGLERYVLQAQLKEILKVANQHLKQLSSGRYAMQLHKEAGAYQKNTGL 930 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 E++V D +R TLSGGESF+ +L+LALAL +++ S ID+LF+DEGFG+L Sbjct: 931 EIDVYD-DNVGQLRSVHTLSGGESFIAALSLALALGEVIQNESGGISIDTLFVDEGFGSL 989 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 D E+L A+ AL+ + + + IG+ISHV ++ERIP QI+V+ G G S+ + Sbjct: 990 DQESLSMAMAALENIESHNRMIGIISHVTMLQERIPYQIQVQ-TEGQGKSRTK 1041 >UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIQ7_SANKS Length = 1047 Score = 355 bits (910), Expect = 6e-96, Method: Composition-based stats. Identities = 216/1116 (19%), Positives = 390/1116 (34%), Gaps = 143/1116 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ S+ L+ + G +DF+ A++G+F + GPTGAGK+TL+DA+ ALY + Sbjct: 1 MQLHSMTLQAIGPFAGRHTVDFS--ALAASGIFLLEGPTGAGKSTLIDAVVFALYGKVAS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + D+ + ++ FE +R + R R + G Q V+L Sbjct: 59 AATSDDRLRSAYADDSTDSFVDLTFETAAGVFRVLRTPERQRAKKRGEGTTKQQASVKLW 118 Query: 118 RCAD---------------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 R G++ + ++ + GLD +F ++++L QG+FA+FL Sbjct: 119 RLPSDAVVAGAGLGEPGDVGELRSTRLDEVGLEIQRAVGLDRAQFVQTIVLPQGEFASFL 178 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQAS-------------- 208 +KP++R LL+++ GTE+Y + A + K+A +L+ ++ Sbjct: 179 RSKPEDRKGLLQKVFGTELYDRAEAALVTMRKTADQQLKAARSAVQVSLETFLATSSLDP 238 Query: 209 ------------GVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQ 256 V L E LT + + L + + + +Q+++ + E+ Sbjct: 239 DDAEALRTAPPEHVGKLAAEHAHELTETARHLEVDATAVRQVHEARRQAVDTGRQTLEVA 298 Query: 257 QEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEV 316 + QQ A ++ L A+ A + P + A + + + Sbjct: 299 ARRDALRLEAQQLAASADEVAALGVRLDAARRASVVMPTLDAEAAARRGVGEASRTLGTA 358 Query: 317 NTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT 376 + S+ A +E + Q D + G RA + Q Sbjct: 359 LDAATGALGELPSLAGLALLDWSE-RSAAQPDEALTAAQDAAAADRSALEGRRAADAAQV 417 Query: 377 SDREHLRQWQQQLTHAEQKLNAL------AAITLTLTADEVATALAQHAEQRPLRQHLVA 430 + + + L ++ A L +A E+ A A R A Sbjct: 418 VLLARVARLEDGLPARRERREQAVVALDEARTALEASAAEITERPAGRAALESQRDEARA 477 Query: 431 LHGQI-----VPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICE 485 L Q ++ A ++ Q + A + + + Sbjct: 478 LAAQADIFRDRERRALATTETFARRDALARQLEEATAERTEAAALATRAVEHEREQRRRW 537 Query: 486 QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEE 545 E L A L G PC +CG+T HPA G Sbjct: 538 IEGIAGELA---ADLVDGAPCAVCGATEHPAPAERGDDHVGREV---------------- 578 Query: 546 GATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ 605 ++ E Q+ + A + + + LD P A Sbjct: 579 --------------VEAAEAARQTAEKALAAAAETVTGLVERVAAQDTLLDGADPEAVAA 624 Query: 606 DEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEES 665 D + ++ + L+ Y + + + Sbjct: 625 D-------------------LVAARTGLREAETAAASAVAAEGALSAYDAETARREAART 665 Query: 666 WLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQ 725 LA + Q + E + L D + ++ V + + + Sbjct: 666 RLAEQVAA----DQARLEHDGTAIAADEKEVDLARTEHQDVVGTDDDVTVAQVVTVLERR 721 Query: 726 CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQL 785 A + D A +SL + + + AL+ D QA A +D + L +E Sbjct: 722 VEAARAVLHACDAVDA-AVRSLAQREGERADALEQHDLDSPQAVRDAWLDRRELVAVEAR 780 Query: 786 KQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTS 845 + + + + A T + V +E ++ A+ + ++ + Sbjct: 781 VSEHRSAQDRVARGLDDPAVTAL---------PDVVDVDLEALRTAAAEAEEAAQQVSAR 831 Query: 846 QGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR-----KFAQ 900 Q+ +Q + + + E + L D R F Sbjct: 832 AVLAAQRAADMERGARQLADAVVALDTVRDTTESVIRMADLATGASSDNARSLTLTTFVL 891 Query: 901 GLTLDNLVHLANQQLTRLH-GRYLLQRKASE--------ALEVEVVDTWQADAVRDTRTL 951 +++V AN++L + GRY L R + L + V+D + RD RTL Sbjct: 892 MRRFEDVVAAANERLVTMSDGRYELLRSDDKEDVGTRKTGLAMRVLDH-STETARDPRTL 950 Query: 952 SGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 SGGE+F VSL LAL ++D+V + + +LF+DEGFG+LD ETLD L L L A G Sbjct: 951 SGGETFYVSLCLALGMADVVTAEAGGIDLGTLFVDEGFGSLDPETLDAVLAVLGGLRAGG 1010 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 + +GV+SHVEA+K+ + I V+++ G S L Sbjct: 1011 RVVGVVSHVEALKQTVADGISVRRLP-DGSSTLTVR 1045 >UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2Q2_EXISA Length = 1002 Score = 354 bits (909), Expect = 8e-96, Method: Composition-based stats. Identities = 207/1072 (19%), Positives = 430/1072 (40%), Gaps = 104/1072 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ IDFT+ +F ++G TGAGKTT+ DA+ ALY Sbjct: 1 MRPVELMIQAFGPYAERETIDFTQ--LVGRSMFVVSGRTGAGKTTIFDAMTFALYGRASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + + F ++GE YR + + + + Sbjct: 59 ALRNASDFRSQYAQPELKTEVDFSFTIRGERYRIVRQPQQPHPKNKTPIPHEAILYEWED 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K LA KV + E ++ L Y +F++ +LL Q QF L++ E+ ++L+ + TE Sbjct: 119 GWKPLATKVNEVQERIESILQLSYEQFSQILLLPQNQFRQLLDSNSNEKQQILQSIFKTE 178 Query: 181 IYGQISAMVFEQHKSARTELE---------KLQAQASGVTLLT-----------PEQVQS 220 Y E++ + R ++E L+ + + ++ E+ + Sbjct: 179 AYRTFQEKWGERYSAYRKQVEWAVERTRLKLLELEDESIEEVSTQSIDEIQRWLDEREEH 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 L A+ + +++ TA ++ + +L L +E +AL L E Sbjct: 239 LIATCETALAQKQTYATALEEARDALEKAKALITLFKEREETDRALAIFLNGESIRNETR 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 L+ + A N+RP +ER+ E + + + + +T+L+ + ++ + A Sbjct: 299 ELLTNLEVAANIRPVFERLQELEQLVRRLTMEEQTSSTKLEHLQSTQSKLVERQAT---- 354 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 ++ + +R R + + +R L + QL + ++L + Sbjct: 355 ---IEKDKEEVISRKERLRIVDEMMPRIK--------ERTTLVTLRDQLMNRAKQLATFS 403 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 + E L + + P + + A + V + LA L+ + ++++ + Sbjct: 404 KESRLQELQEKEQQLVESVKSEPSERAVDA--ERHVDRLVHLASLETKARELSKQLDECE 461 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 +++++Y + + ++ + + ++ L G+PCP+CGS H + Sbjct: 462 RTGKDVQRQYVTQQEVVS----TFKHQEQLLLARQLSETLVDGEPCPVCGSRHHDIPQHE 517 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 + + E +LD ++ +L + +S Q +A+ Q+ Sbjct: 518 ETVTNI-----------------TERDAAVARLDDLSTRLIEARADYRSFYQQLEAIRQE 560 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 + + +++ W + +R+ R+ + Q++A +Q+ Q ++Q Sbjct: 561 LDQASIDIQFDGDITEELNKWRTRAERLQREERIRQENERTLRQLSAEIRQLEQERRQQF 620 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 + ++ +++ L L Q E ++ Q E L+ RI L +E Sbjct: 621 EERERVVSELEATQQNLHALG---------QSEETTFDALQRERADLEQRIAMLMKQVEA 671 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 E E + EQ + +Q D + + ++ T + Sbjct: 672 YEHEFETMKKALWKEEERLSLIREQLS------EASKQYDAQQTIWVNQLESSHLTRERY 725 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 F +Q T + + Q E + + + L E L ++ D Sbjct: 726 ESFANQID---------KRTMIREQLQREEEEGVRLRHLKQMIEEKLENQER---PDLHG 773 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 + + V+++ + Q ++L + R + + R+Q +++ + + Sbjct: 774 MEMKVKEVNEWSEQASKQLITAQDALSRHRHVISEWNTLREQTAQEERKLETIKLIADTG 833 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEAL 932 +N + F + Q D ++H AN L ++ G++ L+RK A L Sbjct: 834 KGIN-----PQKMTFETYVQTAFFDQILHAANIHLDQMTSGQFRLERKVETAKGNAKSGL 888 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 E+ V D + + R + LSGGE F SL+LAL L+++V S ++++ +DEGFGTL Sbjct: 889 ELLVFDAYTGQSRR-VQNLSGGEGFKASLSLALGLAEVVQQLSGGISLETMLIDEGFGTL 947 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 D+E+LD A++ L +L A+G+ +GVISHV+ +K+R+ +I+VKK +L Sbjct: 948 DAESLDQAIELLMSLQATGRLVGVISHVQELKDRVDARIEVKKSRSGSSIQL 999 >UniRef50_Q8EP67 Exonuclease n=1 Tax=Oceanobacillus iheyensis RepID=Q8EP67_OCEIH Length = 1029 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 199/1072 (18%), Positives = 430/1072 (40%), Gaps = 88/1072 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+L K IDFT+ LF+I+G TGAGKTT+ D I ALY Sbjct: 1 MRPLYLKLTAFGPYKDTEIIDFTK--LGDVQLFSISGNTGAGKTTIFDGIAFALYGRASG 58 Query: 61 LSNVS-QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR--NQPDGNLQVPRVELA 117 + D E+ F +K YR + N+ + EL Sbjct: 59 SDREDNRLLRSDFAEDHTHTSVELTFTIKERTYRVLRQPGHIKKGNKTKTGEKYELFELT 118 Query: 118 RCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + I+ + V + + L GL +F + ++L QG+F L ++ + + +L L Sbjct: 119 EQKEISIVDRQIVSEVDKKIEELIGLTQDQFKQIVMLPQGEFRKLLTSETENKEAILRRL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASG----------------VTLLTPEQVQS 220 TE Y ++ ++ ++ + ++ Q + + + + + Sbjct: 179 FKTEHYKYMNEILRQKKNTFEQSYNRVSDQLTQTMKQVSSTFPLRENSKLQYVFQTEYYN 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + L+ L +E+ +++ Q ++ ++ Q+ + + + + + + + Sbjct: 239 VQQVLEALNEEKTYYHQEIEKKTQQYTSSYKKHDIAQKEYYAAKHINEQFDQLQVKKQRS 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI---RHHAAKQ 337 L Q L + + AE + + I Q +LQ ++ AA+Q Sbjct: 299 QELMNKQAEIRLIENQLKAAEQAQRIEPIEQFALNYQQQLQEKEIQLKTLTEKEQQAAEQ 358 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 + + ++ ++ ++ + ++ + Q S+ ++ + Q EQK+ Sbjct: 359 LKLVTAKYKNEEEKSEQREKISIYISQLESYLPIVEQLDSESNEIQSLKNQNVQQEQKIR 418 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 + ++ +L++ ++ + + + + + +++ +L + ++ +E+ Sbjct: 419 EDGQLLERKEKEQ--ESLSEEIKKLTKQVEKASDLNKRLTELRQVGKLLQRLISLQKEEA 476 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + +Q Y+ +Q EQ + L + CP+CGST+HP Sbjct: 477 YIQNKYQQTKQDYENSEKQY----QEIEQNWINNQAFVLASHLHDEEECPVCGSTTHPNK 532 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + + E + R Q + K Q + S + + Sbjct: 533 ASIENQSVT----------------KEALESFRIQKEEKNKNWQEQQVALSSTKTSLTEV 576 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 + + SL+ D+I E ++ I ++ Y+ Sbjct: 577 SAELNEWGISLDNPSITFDEIVQEGKQLAEQKKN-------------IQHAKEKRNNYEA 623 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 ++EQ+++ + + E+ S L ++Q +++ E +++ +L Sbjct: 624 KVEQQKREDKKNKEAFEQLKQKYQEQVSLLKSKQASHIEKKKQVPEEF---HQLSKLKDS 680 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 L Q + + + ++Q+ ++ L + S+ + Q Q ++ ++KA +F+ Sbjct: 681 LRIQKQQKQEMEQAWKEIQQEYQQITQRHLEIRSEVKNYQTQITDLSKQVEKANKEFEQK 740 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 + + F ++ + A ++E L Q +Q +N + +++Q V + LAQ ++ Sbjct: 741 ISEAGF-TRETYQEAKLEESILLQRKQQVENYKQEKQQIDNQVKELEAILAQQERQ---- 795 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + +++ L +N +++ ++ +++ + L ++A+ ++ Sbjct: 796 ------DLGFLEERLRDLKHDFEQNLNELNTLKKFDQEIRSIKERMEVLHNEVAETENKL 849 Query: 878 EDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA------ 928 + ++ + K F ++ Q L+ ++ AN +L L G++ L R Sbjct: 850 MVITEVYDVLRGQNQKKVSFERYLQMEYLEQIIEAANYRLKDLSNGQFYLTRSDRQESHG 909 Query: 929 -SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDE 984 L ++V DT+ RD +TLSGGE F SL LAL +SD++ I ++F+DE Sbjct: 910 RQSGLALDVYDTYTGQ-TRDVKTLSGGEKFNASLCLALGMSDVIQSFQGNVMIQTMFIDE 968 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 GFG+LD E+L A+D L L SG+ IGVISHV+ +K+ +P I+VKK Sbjct: 969 GFGSLDEESLTKAIDTLVQLQKSGRLIGVISHVQELKDILPATIEVKKTKEG 1020 >UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP6_9FIRM Length = 1023 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 216/1065 (20%), Positives = 398/1065 (37%), Gaps = 78/1065 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + + + +DF+ + F I G TGAGKT++ DAIC ALY E Sbjct: 1 MKPEILTICAFGPYQKKVCLDFSI--LSEQPFFLIHGATGAGKTSIFDAICYALYGEAAT 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELA 117 + + + + ++ F V+ + + R G Q P V L Sbjct: 59 EARTPRMLRNREAGPEVDTYVDLTFCVRDTHWHIRRNPEYMRKAKRGTGLARQAPEVVLE 118 Query: 118 RCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R DG++ + + L G +F + +LL QG+F FL A R E+++ Sbjct: 119 RLEDGRVAESWTRDGEVQARIVRLLGFQCKQFRQVVLLPQGEFRRFLMADTSARKEIMKV 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKL-QAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L TEIY ++ + E+ + + + Q + + A L + Sbjct: 179 LFNTEIYQKLEDKLKEKATEVSKSYDGIAEKQRMYLAEANAKDEAEFAALLAAREQQTAA 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L+ Q ++ + +E + + +A E L P Sbjct: 239 LVKRTAALQSRKEACEKERDAARETMAKFTQVDKAAEE-------LQKWERIVPEDEEAK 291 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 A+ +AAL + Q++ +++ K + +Q ++ Q+ Sbjct: 292 AMLDRADRAAALMDLANQLQAARQDAAKRGQGLEALKQQGKKLATAYKQAEERFVMVQQQ 351 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 E + + R + T +E+ AA L A E Sbjct: 352 KPAHAAEREELIVLQGLLKVARELEQAKRDAVAKQTASEKGQQEAAAAKQQLLAAEQEFK 411 Query: 415 LAQHA----EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 Q ++ L + L Q + ++ A + + +E + ++ Sbjct: 412 ALQQEVEALQKEALNVDALKLRQQNLLAEQEKAAAAARSEALVREAAAGYEQAEQAAKKA 471 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS 530 + + Q + A+ L+ G+PCP+CG+T HP + +A+ V Sbjct: 472 ETEWQAARAELAHLRELAKEARAVLLAEHLEEGEPCPVCGATHHPKLA--EAVTEIVTDE 529 Query: 531 RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI 590 L A E +V + + + L + EA++L + Sbjct: 530 MLKAKEADVSGFEQRHQAAAARAQEKSGMLAAAKAEAEALVKQL---------------A 574 Query: 591 TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 +P + + + + + L I Q+ Q Q++ +Q + Sbjct: 575 GREPAELAAELAKVKTALQGAQKAAEEYGSLMKAIERKQQEQAQLQEKAAALEQKAAASA 634 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHC 710 A ++++ LA R+ L ++L + + + Sbjct: 635 AEAAAAKALVQDKQAQLAGRE---------------LPAEPKELAHQYQQREAAWQAAEK 679 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFL 770 +++ + + A S +T +++ + + Q Q F L + F D+ A+ Sbjct: 680 AAVAAEQDYHSLDTRYHAAQSAWKTKREELLRSQQQAAALQQSFAGRLVQAGFADEAAYE 739 Query: 771 AAL----MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 AAL ++ + + E A+T +T +T+ + + + Sbjct: 740 AALQGSWRASDYRDKVRRELLSHEQALHTARTNLTDCQKTIEKLE----------KPDLA 789 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 + + ++ L+ ++ L +Q ++TQ L+ L Sbjct: 790 AAEDAASAAQAAWQQALRESSAAETVLRSWQKRQKALDALREQSGELTQTYARITGLSEL 849 Query: 887 IGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLL------QRKASEALEVEVV 937 K G + F+ + LD+++ +ANQ+L + G+Y L + L++E+ Sbjct: 850 ASGKTGSRVSFQTYVLHSLLDDVMEMANQRLLIMSRGQYELHAGQRQRANQQGGLDMEIF 909 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETL 994 D + A R TLSGGESFL SLALAL L+D+V + R+D++F+DEGFGTLDSETL Sbjct: 910 DHYSGYA-RPLATLSGGESFLASLALALGLADVVQACAGGVRLDTMFIDEGFGTLDSETL 968 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 D AL AL L SG+ IG+ISHVE ++ RIP +++V K G + Sbjct: 969 DVALKALFELQKSGRLIGIISHVEELRSRIPARLEVTKTKSGGST 1013 >UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI Length = 1046 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 206/1084 (19%), Positives = 416/1084 (38%), Gaps = 88/1084 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L ++ G +IDF+ S +F I+G TGAGKTT+ D I A+Y + Sbjct: 1 MKPLKLAMQAFGPYAGTEEIDFSS--LGSKTMFVISGKTGAGKTTIFDGISYAIYGKASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + ++F ++ Y S + + + G R EL Sbjct: 59 EDRNGPELRSQFAENNLLTEVSLQFSLRDRTYYITRSPQQEKKKERGEGFTTIGARAELY 118 Query: 118 ---RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + +LA V+D E + +D +F + +++ QG+F L + KE+ +L+ Sbjct: 119 MYDEKNEKVLLAANVRDVDEKIKEIMLIDSSQFRQILMIPQGEFRKLLTSDSKEKEVILQ 178 Query: 175 ELTGTEIYGQISAMVF----EQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 L TEIY +I + E KS + ++ G+ E + + Sbjct: 179 RLFHTEIYKKIEEKLRTEATELRKSVEKQADRRNHLLHGIHASYQEDLIEALEEDTLNDS 238 Query: 231 EEKQLITAQQQE---------QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 +L+ + + + +D LQQ+ + L+Q +EE + Sbjct: 239 RILRLLEKEIELLNGEMDKLVYEGRKKQEERDSLQQKIYEAEAVLKQLAQKEELKAKKEE 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 S + + + +A+ +A L + ++ + L S A + L Sbjct: 299 LESRKEWSEA-KEQEIILAQKAAILEQQEELCHKLKSDLDSCKAEFERLEKSTEALYQLL 357 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 QQ++ + Q NE A ++ D L + + + +++L++ Sbjct: 358 QQKEAAY----QHEKNREAERNESAEAVSRLQAMKEDVLALSKTKSEAEILKKRLDSSRQ 413 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L A + ++ Q V +++L Q ++N+ + ++Q Sbjct: 414 TIENLEAGQ-KQWEETLKRLNAEKKEADGSLLQSVEMERKLEGSQSLLENINKYESQEQK 472 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR---------AQLQAGQPCPLCGST 512 + + + ++K + + LE + +LQ G+ CP+CGS Sbjct: 473 LADSLEKLEQQKQLLEKQQARAEDARQLVAELEQKWLHGQAAILAGKLQDGEACPVCGSM 532 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP + E +++ ++ + + ++ A SL++ Sbjct: 533 EHPLPAVSGGPDFPD--------EKDIEAAKKQQLSCEEDRSKAESRYYEIQSAATSLKE 584 Query: 573 DEQALTQQWQAVTASLN---ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 L + L+ IT + + + E R +Q L+ +I Sbjct: 585 SIAELAARVAEQKPGLSEDSITSYKQELLSESSRMESELAGFRRKAAQADRLEQEIKRAE 644 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 + + Q ++ +Q L + + T + +S Q + EL A Q Sbjct: 645 SEKSR---QADELRQAAADNQEAGILFAEKNTVLSRMMETVPENLRSRQAYEEELQAAQQ 701 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 Q+LT LE + + E+ ++ + + Q L Sbjct: 702 HQQKLTQRLEEAQAA--------------YTDTREKHSNEKTRLEVAENQLKQTGDKLSA 747 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 + F + F Q + A +E+ L L+ ++ + R A + E L Sbjct: 748 ERELFRDRMVGQGFTVYQDYHHAKRNERELEGLQAELRSYREELRSAADRYHELTELLKD 807 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 ++ ++ ++++ + + L + + +++ + ++ + + Sbjct: 808 VKE----------PDIQALKEQFGEVDKLLAALQEQYTGLLVKKRENGEIHKKVTEINED 857 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR 926 I + +Q G+L + + + F ++ LD+++ AN +L ++ GRY L R Sbjct: 858 IKLLEEQYHLLGHLFEISKGQNTFRITFERYVLAAFLDDILREANGRLGKMTSGRYRLLR 917 Query: 927 KAS-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTR 976 K LE+ + D + R +TLSGGESF +L+LAL L+++V + Sbjct: 918 KTDRSKGNVQSGLELLIFDQYTGQE-RHVKTLSGGESFKAALSLALGLAEVVQQYAGGVS 976 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 ++++F+DEGFGTLD E+LD A++AL + ++G+ +G+ISHV +KERI V+++V Sbjct: 977 LETMFIDEGFGTLDPESLDQAIEALIDIQSTGRLVGIISHVPELKERIDVRLEVTATQQG 1036 Query: 1037 GYSK 1040 ++ Sbjct: 1037 SRTE 1040 >UniRef50_C6VSY3 SMC domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSY3_DYAFD Length = 1032 Score = 352 bits (904), Expect = 3e-95, Method: Composition-based stats. Identities = 221/1075 (20%), Positives = 418/1075 (38%), Gaps = 86/1075 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L++K L S + E +IDF +P LF I G G+GK+++L+AI ALY +T R Sbjct: 1 MIPKRLKIKGLYSYQTEQEIDF--DPLTDASLFGIFGSVGSGKSSILEAITFALYGDTER 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVE--FEVKGEAYR-AFWSQNRARNQPDGNLQVPRVEL 116 L+ + ++M + + L + E + YR + ++N D + + Sbjct: 59 LNKSGDDRTYNMMNLRSDDLLIDFECIAGKNADRYRFTVRGKRNSKNFKDVKTFERKGYI 118 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + D LA+ E T ++ GL Y F R++++ QG+F F+ K ER +++EL Sbjct: 119 WQEEDWVPLAE-----NESTESIIGLSYDNFRRTIIIPQGRFQEFIELKDAERTRMMKEL 173 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E Y +S V L + Q G+ +T E + L+ + + +Q+ Sbjct: 174 FQLEKY-DLSRNVGSLSNRNNLALSNVDGQLMGLGEVTQEMLAESEQRLEQIRLQIQQVS 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPH 295 + + + L + ++ Q L ++ Q + AAL + + + + Sbjct: 233 AELNVQTELESNLQKLKLAGEKTQMLQNRLATLDSQRAAMQEREAALKTFETCSLHFKSI 292 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 +++ A+A + +L AL + + +++ L +E Sbjct: 293 FDQKNNLLTAIARDERISSANQAKLTELAALLEKQQETLQMLKPRFE-KREELLATAEEL 351 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE----- 410 ++ + + EHL++ + + +Q+ L A A Sbjct: 352 EKVIRIIEHSQSVIKRKDALQRGEEHLKERENAIELQKQQKQELEAANEQRKAGLGDVLE 411 Query: 411 ---VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ-LQVAIQNVTQEQ------TQRN 460 V + + + RQ + + + K L + L +Q +T E Sbjct: 412 MGLVKSWFVKTDDLMADRQSIKTEAETLAAEIKTLTEGLTQRLQEITGEFGIPFDGEMLL 471 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKT---LEAQRAQLQAGQPCPLCGSTSHPAV 517 + Y E + D + + Q I T L L+ G PCPLCGS HP V Sbjct: 472 ENFQKRITSYLETCET--DRRELNRQLLHINTRVALHRYAGNLEDGAPCPLCGSLHHPEV 529 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + G + A+E + L E+ LR + ++R N+ ++L + + ++ Sbjct: 530 ----LIADGALSAETAAIEKRLNALDEKERLLRK----LQSPIERVFNQIENLERQKTSI 581 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 Q++ A L + P + D R ++ +QG+I A + Sbjct: 582 KQRYADAQAKLKAHDEGFA--WPAFNKADREGFDKRF-AESSRVQGEIKAGETILKGLTA 638 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 QIE + + Q ++E+ +N +Q L+ Sbjct: 639 QIEAALTEKAEKIE-----------------------KPLQVLKDEILRFENTVQTLSEQ 675 Query: 698 LETLPQSD--ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 L + +D + ++ + R + Q A + + +L +QA Sbjct: 676 LSRVSLADFANADKADISLKINALRTDYTQLSAAFADAEKQADALEKERNTLSGSQAAML 735 Query: 756 TALQASVFD--------DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 TAL+ + + D+Q A E + ++ Q +E +R+ T Sbjct: 736 TALEGNRAELVAVQVKIDEQLTAYAFESEAQVAEILQKPLRIETERQAIDEFRLALETTN 795 Query: 808 AQHQQHRPDDGLALTVTV--EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 A+ + D E++ + L +G I +LKQ A++ ++ Sbjct: 796 AELKNMLEDHAGEQYDAARHEEVIALKIALTENLNAQRKEEGNIGGRLKQMAEDLAKKAA 855 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ 925 L+ + A++ + E L L S F +A + L NL+ AN + ++ + L Sbjct: 856 LLAEKARLQLRKEHLDDLAKLFRS---SGFVDYASSIYLQNLIQAANHRFHQMTHQ-QLH 911 Query: 926 RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL--VSHKTRIDSLFLD 983 + E V D +R +TLSGG+ F +L+LALAL+D V ++++ + FLD Sbjct: 912 LELGEGNSFWVRDLLNGGHMRLLKTLSGGQKFQAALSLALALADHIHVRNESKHNFFFLD 971 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 EGFG+LD L T + L +L + +G+ISHVE +++ I +++ + Sbjct: 972 EGFGSLDKNALQTVFETLKSLRKENRIVGIISHVEDLQQEIQTYLRITESEEGSR 1026 >UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N0H5_PHOLL Length = 1228 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 314/975 (32%), Positives = 467/975 (47%), Gaps = 113/975 (11%) Query: 183 GQISAMVFEQHKSARTELEKL-QAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQ 241 ++ +V E + + + L A+ L E ++L L + + +Q Sbjct: 252 EELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRPLLDDKNRTQYEHQRTSKQ 311 Query: 242 EQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL----------SLAQPARN 291 ++ L + + ++ A AE ++ + Q L +A + Sbjct: 312 LEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVIPLDHQIAVQIKE 371 Query: 292 LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ-------------S 338 L ++I E L + QQ + N R S R + ++ +Q Sbjct: 372 LNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPYHQYFGEKLAFWQ 431 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSD-REHLRQWQQQLTHAEQKLN 397 + +Q+ + + + E ++Q D ++ + Q EQ Sbjct: 432 HQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQQIENNQPLELAFEQAKQ 491 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 + + +++ L Q+ EQ PL+ L L QI+ Q +A + +Q + Sbjct: 492 QFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHHIRLQQPEKLLK 551 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + + + ++ +K Q L+D+ + E +I +LE +RAQL+ G PCPLCG+ HPA+ Sbjct: 552 EFPVQIESIDKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQLKEGSPCPLCGAEHHPAI 611 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 +AYQ +E ++ RL L + + L +L + + ++ E L Sbjct: 612 QAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEYDHILQEITDAEPRLNIL 671 Query: 578 TQQWQAVTASLNITLQPLDD-------------------------------------IQP 600 TQQWQ A L + D + Sbjct: 672 TQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTEFELAEKTYQKTEKTVTA 731 Query: 601 WLDAQDEHERQLRLLSQRHE-LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQ 659 + E ER + L +H L+ Q++ +I Q Q ++ + + + L Y L+LP Sbjct: 732 HQEYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKMTSELQQYNLSLPM 791 Query: 660 EDEEESWLATRQQEAQ-------SWQQRQNELTALQNRIQQLTPILET------------ 700 ++ E+WL R++E Q +WQQ Q E +QN+I+ L E Sbjct: 792 LNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKEEYLSHLNRLNQTA 851 Query: 701 -----------------------------LPQSDELPHCEETVVLENWRQVHEQCLALHS 731 L Q + L + +Q L Sbjct: 852 QQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEEMHKQALSHLQQAQSSINQLTG 911 Query: 732 QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLEN 791 ++ D + Q Q+A+ F+ AL S F DQ A +AL+ ++ +L QLK+ LE Sbjct: 912 AIHETEKNDNQSEQQKQQAEQNFNAALAKSPFADQHAVESALLSQEQRKELRQLKEQLEQ 971 Query: 792 QRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ 851 Q+ QA L + AETL QH+++RP+ T + Q+ ++L +L+ NT QGE++ Sbjct: 972 QQIQANALCQKAAETLQQHRKNRPELLNQYTKS--QLTEQLENMTDELKRNTLQQGELKN 1029 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 L DA RQQQ++L+++I+ Q +DW YLN+LIGS +G KFR+FAQGLTLD+LVHLA Sbjct: 1030 LLGNDAIRRQQQKSLLEEISHCRQNYDDWSYLNNLIGSADGAKFRRFAQGLTLDHLVHLA 1089 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 NQ+L +LHGRY LQRK S+ LE++VVDTWQADA+RDT+TLSGGESFLVSLALALALSDLV Sbjct: 1090 NQRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLALALALSDLV 1149 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 S+KT IDSLFLDEGFGTLD ETLD ALDALD LNASGKTIGVISH+EAMKERIPVQIKVK Sbjct: 1150 SNKTCIDSLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHIEAMKERIPVQIKVK 1209 Query: 1032 KINGLGYSKLESTFA 1046 KINGLG SKL F Sbjct: 1210 KINGLGISKLSPEFR 1224 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 300/925 (32%), Positives = 439/925 (47%), Gaps = 50/925 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFAS+GLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQP+GNLQ P+VELA + Sbjct: 61 L-TISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQAPKVELALSS 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKILADK++DK E +TGLDYGRFT+S+LLSQG FAAFLNA+P ERA+LLEELTGTE Sbjct: 120 SGKILADKIQDKKEKIIEITGLDYGRFTKSILLSQGDFAAFLNAQPNERADLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S +++QHK A++ L+ LQA+AS + LLT EQ Q Q LT E QL + Sbjct: 180 IYGILSQQIYQQHKQAQSVLDILQAKASTIDLLTAEQHQQYLEQQQQLTHAESQLNQQIK 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q S WLTR++EL+Q + LQQA A+PQL L+ ++PA LRP + Sbjct: 240 TVQHSAQWLTREEELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRPLLDDKN 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRH---HAAKQSAELQQQQQSLNTWLQEH-- 355 +Q+EE++ +LQ I+ HA AE QQ +Q + E Sbjct: 300 RTQYEHQRTSKQLEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVI 359 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL 415 Q + Q + L QQ A Q+ A++ T ++ Sbjct: 360 PLDHQIAVQIKELNLTQQQINEQKTVLENRCQQYDTANQR-----ALSFTNQRKQLENYF 414 Query: 416 AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 Q + + L Q +Q+ Q+ Q V + + N + ++ ++ Q Sbjct: 415 EQQPYHQYFGEKLAFWQHQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQ 474 Query: 476 QLADVKTICEQEARIKTL----------EAQRAQL-QAGQPCPLCGSTSHPAVEAYQ-AL 523 Q+ + + + + K E + QL Q + PL + + Q Sbjct: 475 QIENNQPLELAFEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQA 534 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + RL E +K+ + ++ QL + L Q ++ ++ Q Sbjct: 535 AIASHHIRLQQPEKLLKEFPVQIESIDKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQL 594 Query: 584 VTAS----LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 S P ++ +R L Q LQ + + QQ+ Sbjct: 595 KEGSPCPLCGAEHHPAIQAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEY 654 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS------WQQRQNELTALQNRIQQ 693 + Q + + Q E + L T + QQ Q+ Q ++ + Sbjct: 655 DHILQEITDAEPRLNILTQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTE 714 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 +T ++++ + V E R + Q L++Q +Q+ Q + Sbjct: 715 FELAEKTYQKTEKTVTAHQEYVKEIERNIELS----KHQHNILKKQLSELQPEIQQQQHK 770 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLE---------NQRRQAQTLVTQTA 804 ++ + QQ L+ M T L+Q ++ + Q ++ + ++ Sbjct: 771 LTDVIEKMTSELQQYNLSLPMLNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQI 830 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG--EIRQQLKQDADNRQQ 862 E+L + ++ L T +Q +Q+LA+T Q+ ++ Q EI Q L+Q + ++ Sbjct: 831 ESLHKQKEEYLSHLNRLNQTAQQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEE 890 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLI 887 Q ++ + Q L I Sbjct: 891 MHK--QALSHLQQAQSSINQLTGAI 913 >UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI05_CUPTR Length = 1020 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 228/1064 (21%), Positives = 373/1064 (35%), Gaps = 80/1064 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ IDFTR I GPTGAGKTTLLDAIC ALY +T Sbjct: 1 MRPLHLTLQAFGPFAATEAIDFTR--LGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWS--QNRARNQPDGNLQVPRVELAR 118 +Q+ + F + + +R S Q R + + +G + P Sbjct: 59 GERSAQAMRSANAAAGLRTEVTLTFSLGAQRWRVVRSPVQERPKQRGEGWVTEPARAQLD 118 Query: 119 CADGKILADKVKD---KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 DG K + L G D +F + ++L QG+F L A + R +LE Sbjct: 119 LHDGNGWVSKASQPGKVTDAVRELLGFDSAQFRQVIVLPQGRFRELLTASSQARQAILER 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEK--------LQAQASGVTLLTPEQVQSLTASLQV 227 L TE+Y ++ ++ + S R E+ L+ + + ++ A+LQ Sbjct: 179 LFRTELYRRVEELLKTEAASIRRGAERIAIQREEALRQAGVESAPALADGIATMHAALQA 238 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ 287 L +E+ AQ Q +L + QE + Q A LA + Q L AQ Sbjct: 239 LQGQEQGARAAQAAAQAALAAGEQVAARLQERQQAQAAHAALLARQAAMDDQRGRLQAAQ 298 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 A + P + A + + Q + +Q + Sbjct: 299 RAARVMPAVQAAQAAQRDHAAGAAALAQATGHAARAGQRAMEAAAALQAQVQQADARQAA 358 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT 407 Q + A RA + + E A +T Sbjct: 359 QRRVAQLEAMLPRAQRLGALQRALHEAEARQAAAATARDRAAARLEACRTA------AVT 412 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 A+ A Q +A + Q +R Q ++ + A R Sbjct: 413 AESALGQAQLAAAQAQASALQLAALQERARQFERYRQAARSLDAANMQAAGYAQAEQHAR 472 Query: 468 QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 Q+ LA+ E R L +G CP+CGST+HP + A Sbjct: 473 QQRDRCRTALAEA----EAAWRAGQAARLAQTLASGDACPVCGSTAHPEPARHIAQPLSD 528 Query: 528 NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS 587 LALE + L E A + L + AL +A A Sbjct: 529 -----LALEAARQALLEAEAEAVRCAGQHQAAQLAIAQARERLEELAAALGDASEAAAAG 583 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 ++ + Q +A Q+ Q+ Sbjct: 584 VSADI--------------------------ATRQAALAQQRQESASLAQREAAIAASRA 617 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + A ++ WQ ++ L L + Sbjct: 618 ARDSAEAGHRNAVAAADAAAQALAHCRGEWQAESAQVPDDSRDPVALGEALRQAQAALAG 677 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 RQ + + + +Q A+ L A A AL F D + Sbjct: 678 LEQALATAQAAERQAAAEAAGAQAALVSARQSQAQVAERLASADAALAHALAQHGFADAR 737 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 A A +D+ + L+ + + +Q A + ++ ++ Sbjct: 738 AHADACLDDDAMQALDATLRTFD----------SQLAAAADRRERAEAAAQALDAPDLDG 787 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 ++ LA + + + Q E + +Q+ Q L ++ + + G L + Sbjct: 788 LRAALAASAATVEDLVRQQAERGRSRDALLQCQQRLQQLDREGRDIEARFAVLGRLAEVA 847 Query: 888 GSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVEVV 937 + F++F LD ++ A+ +L + GRY+LQR +++ L++EV Sbjct: 848 NGNNPRRMTFQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVREQADQRSAGGLDIEVF 907 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETL 994 D A R TLSGGE FL SL+LAL L+D+V + ++D+LF+DEGFGTLD E+L Sbjct: 908 DHDTG-AARPANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGTLDPESL 966 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 D AL L L +G+ +G+ISHV ++ERI V+++V+ +G Sbjct: 967 DFALRTLLDLQQAGRLVGIISHVTELRERIDVRLEVRPGSGGSR 1010 >UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus RepID=SBCC_STAHJ Length = 1011 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 185/1080 (17%), Positives = 426/1080 (39%), Gaps = 109/1080 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L N E IDF E LF I+G TG+GKT L D I AL+ + Sbjct: 1 MRPTKLILNNFGPFIHE-VIDF--EQINKEQLFLISGKTGSGKTMLFDGIVYALFGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + E EF++ + ++ + + + +L ++++ Sbjct: 58 EGRNEGELRSHFADGKSPMSVEYEFKINDKKFKISRQAGFIK-EGNTSLTPGKLDVFEFD 116 Query: 121 DG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + ++ K+ L G++ +F + +L QG+F FL + ++ +L L Sbjct: 117 EESQLYELRESKISSGNGFIKDLLGINAEQFRQLFILPQGEFKKFLVSNSSDKQSILRTL 176 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGV-------------------TLLTPEQ 217 + + ++ ++ Q K + ++E ++ + ++ T + Sbjct: 177 FNSIRFEEMQNLLLNQVKDEKKQIESRYSRIQILWEDIETFENDELIQFKSLNSMQTKDI 236 Query: 218 VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ 277 ++++ V ++ + + +L + R+ E + + L + ++ + + Sbjct: 237 IKAIPQFELVGQHLNEEYEQLKSEHNDALEAIKRKIEENNKLIESLKELDRNKDKKVQLE 296 Query: 278 PQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ 337 ++ + + +++ Q+ E +L S + + K Sbjct: 297 KNKDSIEKLKAELRKIIEIKPLSQLYNQRNTKEQKYENTKVKLNSILEELNELNDKLEKF 356 Query: 338 SAE---LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 E L +Q + +N + D+ +Q+ + +R F++ + +L++ Q+ + Sbjct: 357 KKEKEILNEQLEDINIKSEYIDKTKQFYSNINKYREAFNEIKQNETYLKENNQKQEENKN 416 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 ++ L + + + + Q + L ++ L + + Q+++Q Sbjct: 417 LIDKLNNDIAKIDVN--------NENIDEITQEIFQLTNT-FDKKVTLRENKKKYQSLSQ 467 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADV-KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 + + ++ + +++ + QL ++ K+ + + ++ + L G CP+CG+ Sbjct: 468 KYNETENSIKKTKEQISDLKLQLENIDKSNIDLNDKQTFIQEIQNALHVGDTCPICGNEI 527 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 E + E NQ+ + + N++ K E L D I+ Q+ E + Sbjct: 528 ESLNEHIKFDEIAKNQNLIKEVNNQLNKKINELTKLETTSDYISNQMSELEINDDEICDI 587 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + Q E E+ + QR +L+ + H Sbjct: 588 NEIEQQ---------------------LRTKNKEKEKLQIQIKQREKLKSALDKHK---- 622 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 + ++ + + LL+ + + + ++ T + E Q ++Q + +T ++ + Sbjct: 623 DIKHSLQIKHEKLLSLKHQFETLINEFKSYTNYDETNKFE-QCFKQYEQIVTDYVSKSEV 681 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + Q E+ +++ ++ + Sbjct: 682 LEKEINQTKQQIEIETNNLNNNKLAIKELEQEISGHSDEI-------------------- 721 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + ++ + + L + Q+E Q E+ ++ + + ++ ++ Sbjct: 722 -NQEMKRIGLNSYKDVEILLSKLENKEQIEMKIQQYEHDHQKLTLEIERLSKLTKDNK-- 778 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + +VE+++ + + + I+ Q++++ D + + + Sbjct: 779 --------SESVEKLEATKTEIESNYNKYVEASATIQYQVQKNKDKFNSIMDHINYLEKE 830 Query: 874 TQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS- 929 ++ ++ L+ ++ K K + L+ ++H AN +L R+ G RY L+R+ S Sbjct: 831 LKEQQEIFELSEVLSGKNSKKLTLENYVLIYYLERIIHQANIRLERMSGERYQLKRRESI 890 Query: 930 ----EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 LE+EV D + ++ R +LSGGE+F SLALAL LS++V S ++S+F+ Sbjct: 891 SHGYSGLEIEVFD-FHSNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLESMFI 949 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLD ETL+TALD L L SG+ +G+ISHV +K+RIP+ ++V +++ + Sbjct: 950 DEGFGTLDQETLETALDTLVKLKTSGRMVGIISHVSELKQRIPLILEVTSNQYQSHTRFK 1009 >UniRef50_UPI0001C34C0F ATPase involved in DNA repair n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C0F Length = 1061 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 211/1104 (19%), Positives = 420/1104 (38%), Gaps = 104/1104 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + S + +IDF +G+F ITG TGAGKTT+ DAI ALY ET Sbjct: 1 MKPLRLVMSAFGSYLKQTEIDFEA---LGDGIFLITGDTGAGKTTIFDAIAFALYGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR----NQPDG----NLQVP 112 E E+ F +GE YR S + R + DG Q Sbjct: 58 QRRDGSMMRSQSALPKQETRVELVFSDRGEVYRIVRSPSYERPSLRKKKDGEQAMTTQPA 117 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 RV L DG K+ D E + G+D G+F+++ +++QG++ L A +ER E+ Sbjct: 118 RVSLF-LPDGSEFPGKISDVNEKIREIVGVDRGQFSQTAMIAQGEYMRLLTAGSRERKEI 176 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEK----------------------LQAQASGV 210 + T +Y +I + E++ +LE QA Sbjct: 177 FSRIFDTGVYERIQRKLRERNSELAKKLEDNGKFCLREAERIRVPEESGLAPRWEQAVSS 236 Query: 211 TLLTPEQVQSLTA--------SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 PE++ +++ + E+++L+ + + R EL+++ Sbjct: 237 LESCPEEILAVSKEACSFSRMEAEKERREDERLVDELHRLGSRIERARRVSELKEQEKAA 296 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQS 322 ++ L+ + +E + + L L + A + + + +++ E+ +L + Sbjct: 297 EEHLRLLQSSQEVFEEKKRRLKLGRQAAPVWQKEDEARKKEGEWIEAGERLGEIKEKLSA 356 Query: 323 TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL 382 + + + + +Q L QE R E A + RE Sbjct: 357 LSEDFLQAEKDSGEAESRYRAEQPGLLEQEQELKRSLPLYRELEQCMASIRAEEVRRERT 416 Query: 383 RQWQQQLTHAEQ-KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 ++ ++ ++ L LAA+ + R + L + + + Sbjct: 417 KREEEASAEGQEDCLKRLAALKAEREEKRDSGL-----NLERCRAEIERLKKR-KDEVTQ 470 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 L + ++ + + L + Y++ + I + +L+ Sbjct: 471 LGRKLKELEEREKRLKEEQDILGRESRNYEQAAADYDRLYRIF----ILSQAGLLAEELR 526 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 G+PCP+CGS SHP E+ + + + + Sbjct: 527 EGKPCPVCGSLSHPCPARLLDERVT----------------AEQLDRAKKVRETADRAAR 570 Query: 562 RDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 ++L+ + + Q +A+ ++ D Q+ + L + E Sbjct: 571 ERLACVRALKAETGVVKSQCEAMYEAIRKPGADEVKEHAVFDRQNAFQEMRELFFELQEE 630 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 Q Q ++ + + ++ + L+ + E LA + S + R Sbjct: 631 QRQREREEKEWEKARIRLSEIDVLMEKEEKKREDLERKRKELSGELAGTESRLSSLKARY 690 Query: 682 NEL--TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 E L +Q L + ++ E+ + ++ Q L + + +++ Sbjct: 691 EEQKKQLLFETGEQAEERLSRIQEAAGKLLAEKEKAEKRKEELGRQTGLLKGRLASEEEK 750 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 + ++ ++ LQ F ++ + +A++ E +LE E A + Sbjct: 751 ERKLLSQKEQIYGEWQELLQKMGFSGEEEYRSAILKEGEQERLEADISQYEQSLTAASSA 810 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + Q ++L ++ L ++Q E + + + + A+N Sbjct: 811 LLQCQKSLEGLEEEELSPLLEKEEAMKQ-------------ERRLASFRLSESASRLAEN 857 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD-------KFRKFAQGLTLDNLVHLAN 912 + L + + + + +E++G +N L + +G F+ + Q ++H AN Sbjct: 858 EGACRELERLLGKRRRLLEEYGPVNRLCLAADGKVSGTARMDFQTYVQRQYFSQMIHAAN 917 Query: 913 QQLTRLHGRYLLQR---------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLAL 963 +L R+ L R + L+++V D+VRD +TLSGGE+FL +L++ Sbjct: 918 IRLRRMTQGQFLLRCREFGDLSLRGEAGLDLDVYSVDT-DSVRDVKTLSGGEAFLAALSM 976 Query: 964 ALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 ALA++D++ + +D+LF+DEGFG+LD E A+ L L+ + IG+ISHV + Sbjct: 977 ALAMADVIQNTAGSVEMDALFIDEGFGSLDDEARARAISVLKELSGGKRMIGIISHVAEL 1036 Query: 1021 KERIPVQIKVKKINGLGYSKLEST 1044 +E++ +I VKK + +LE+ Sbjct: 1037 REQMGRKIVVKKGEEGSFIRLETE 1060 >UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5666E Length = 987 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 218/1065 (20%), Positives = 390/1065 (36%), Gaps = 103/1065 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L ++ G +DF + ++GLF + G TGAGKTTLLDAI AL+ P Sbjct: 1 MRLHLLEVEAFGPYAGREVVDF--DALGTDGLFLLHGDTGAGKTTLLDAIAFALFGVVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + + +E V+G+ R S R + G Q RV L Sbjct: 59 ARGDVKRLRCDLAEPDRQTEVVLELTVQGQRLRIVRSPEYQRPKKRGDGFTTQQARVSLT 118 Query: 118 RC--------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 DG I ++ + L G+ +F + +LL QG+FA FL + ER Sbjct: 119 WVGEPPAGLPPDGSI---RIDEVARTVERLLGMTAPQFFQVVLLPQGEFAKFLRSDTTER 175 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT 229 +LLE L GTE + + + LEK Q + + ++ Q Sbjct: 176 EKLLERLFGTERFSDVERWFADLRAERGRALEKRQQEVRELLARYAQEAQQEPPEDGQPE 235 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 E L + + + + + A + ++ + + + L+ Sbjct: 236 WVEAVLTEVAARAEAAETEAAQARSAAKSAEVALREAEEDAEKIRRVRTAHTRLTQVAEQ 295 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE-LQQQQQSL 348 R W + A + + E ++ R + + + S+ Sbjct: 296 AAERAEWTEEIAAARRAAAVVPETELMDRRTGELGDAQVLVADRIRDLADLGFDAVGLSV 355 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + R+ A A+ +QQ SD + + ++ +A +++ LA Sbjct: 356 ADLRERAGSVREEAGALAELAAEANQQKSDEQRRAERRKVAENAAEQVAGLAE-----RL 410 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 E+ LA + + A + + L L A + + + + ++R+ Sbjct: 411 AELPGLLAAARSEATVAGEAAAKLDGAKSRVEELTALTRAAEELPPAEARVARGEAKLRE 470 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 E Q + + A L G CP+CGS HPA + A Sbjct: 471 VVDE-HQAARQRRLDLRERRLDGMAAELAAGLADGTACPVCGSAEHPAPANHDAPLVDAA 529 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + R E A +LRQ + + +A SL Sbjct: 530 EERAAE---------------------------EAEQTAAALRQRVVSALGEAKARVVSL 562 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 L + A E + LS + + + Q+ A ++ + +Q+ ++++L Sbjct: 563 RERLDG-RTAEEIATALTEARTVVSELSGKAQRKDQLNAKVAELERGAEQVAEQRRLAEQ 621 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELP 708 T+T + DE + Q + E + R Q L L + E Sbjct: 622 TVTEATSEIRALDER------MAEREQRLAAGRGEFPDVPARRQHLLTFAGALDLAAEAH 675 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 A L + + + +L A F + Sbjct: 676 AA-----------------------------VSGAEARLAEQRDLVEISLHAKGFSTLEE 706 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 AA+ ++ +T+LEQ + A+ ++ Q + PDD + + E+ Sbjct: 707 MRAAVRTDEQITKLEQGLAEADAMAAGAREMLAQP-----ELFGISPDDTVDVAPLAERA 761 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 ++ A+ + R+ +K + L + + +N Sbjct: 762 KETRARAETAFAAQQAVSAQHRELVKLAGRLSKALSELEPLEEEYAELRALSEVVNGRGQ 821 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTW 940 + R + L+ + A +L + GRY R L ++V+D + Sbjct: 822 NARKMSLRSYVLAARLEEVALAATARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDY 881 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR---IDSLFLDEGFGTLDSETLDTA 997 VR +TLSGGESFL SL+LAL L+D+V+ +T +D+LF+DEGFGTLD+ETLD Sbjct: 882 SG-TVRPAKTLSGGESFLASLSLALGLADVVAGETGGALLDTLFVDEGFGTLDAETLDVV 940 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 ++ LD L A G+ +G++SHVE +++RIP +++V+K +L+ Sbjct: 941 MNILDELRAGGRVVGLVSHVEELRQRIPTRLRVRKSRTGSRVELQ 985 >UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYM8_SACVD Length = 986 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 208/1068 (19%), Positives = 377/1068 (35%), Gaps = 119/1068 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + G +DF + ++GLF + G TGAGKTTLLDA+ AL+ P Sbjct: 1 MRLHRLEVCAFGPYAGREVVDF--DALGADGLFLLHGDTGAGKTTLLDAVAFALFGAVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + +E V+G R S R + G Q + L Sbjct: 59 ARGQVKRLRCDLADADTPTEVVLELTVQGHHLRIVRSPEYERPKRRGEGYTTQPAKASLT 118 Query: 118 RC---ADGKILA--DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 DG ++ + + L G++ +F + +LL QG+FA FL A ER +L Sbjct: 119 WLSPPPDGGTAEAVTRIDEVGRIVERLLGMNAQQFFQVVLLPQGEFAKFLRADTTEREKL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG----VTLLTPEQVQSLTASLQVL 228 LE L GTE + + + R ELE ++ + + E++ V+ Sbjct: 179 LERLFGTERFAVVEQWFRDLRAERRAELEHRRSGVRDWVARLAQVAGEEIPEDPDRDWVV 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP 288 T + + ++ + +E Q R+ A ++ ++ Sbjct: 239 TLQRRAAAEVDTARREESDARLAWEEAQARLQERRAAAERLRRVRAAHTRLAELEQRSEE 298 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 E + + + + A+ R EL L Sbjct: 299 RVRWSTELEAARRAATVAELVAEAEAGEEQYDREVAEEEAAARICRELGFTELDLDVAEL 358 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 R+ +G Q +Q +DR+ L + + ++++ + + L Sbjct: 359 R---DRAGALREEAGGLSGLVDQAQRQHADRQRLDVLDKLIADDKERIAIVQSKLDGL-P 414 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + V L Q L + + L + A+ + +E AA N Sbjct: 415 ERVGELLRQRELAVEAEAKLEGVRAKEAELTALLVDAE-ALPELERELEDARAAENTAFA 473 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 Y E Q L D++ AQL AG+PCP+CGS HP + Sbjct: 474 AYNEAKQALLDLRER----RLAGMAAELAAQLAAGEPCPVCGSEQHPEPAVATDDAVSED 529 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + R+ A + + AT + ++ R+ + A + + L Sbjct: 530 EERVAAEREAEAERRRDEATAK---------------RYEAQRRRDAAAQRVGERRVDEL 574 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 L + D + L + + + Q L+ Sbjct: 575 AEELAQVRDERDRLGEHAGKSEAFAASVEAAKKEEQ--------------------SLMA 614 Query: 649 TLTGYALTLPQEDEEESWLATR-QQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 +L + + E S LA R + ++ + + E + R L + + + + Sbjct: 615 ERASCERSLSENEAERSLLAERIVERERALAEARGEFPDVSARRDHLLALGRAVDRLADA 674 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 A + + + A + + F Sbjct: 675 RTA-----------------------------VSAAGRQRDERRRSIAEAARRAGFASVD 705 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 LAA + + +LE+L + + + A+ ++ + PD Sbjct: 706 EALAAARPSERIAELERLITDADAEEAAARGVLDE------------PDLAGVSPDDEVD 753 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 + A + + + T+ + + + Q +A++ ++ L++L Sbjct: 754 VDSAEAAAQEAQKRSETAVAAVHAAERTARELNTLAQRFEAALAELEPVEWEFAELDALT 813 Query: 888 GSKEGD-------KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEAL 932 G R + L+ + A +L + GRY R L Sbjct: 814 DVVNGRGQNARRMSLRSYVLAARLEEVAVAATARLRSMSQGRYSFVHSDAAGSRGTRGGL 873 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTL 989 ++V+D + VR +TLSGGESFL SL+LAL L+D+V+ +D+LF+DEGFGTL Sbjct: 874 GLDVLDDYSG-MVRPAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFVDEGFGTL 932 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 DSETLD + LD L A G+ +G++SHVE +++R+P +++V+K Sbjct: 933 DSETLDVVMGVLDELRAGGRVVGLVSHVEELRQRVPTRLRVRKSRSGS 980 >UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_AERHH Length = 1251 Score = 349 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 303/1248 (24%), Positives = 491/1248 (39%), Gaps = 208/1248 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NL SL G++ IDF + GLFAITG TGAGK+TLLDAICLALY E PR Sbjct: 1 MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR 60 Query: 61 LSNVSQSQND-----------------LMTRDTAECLAEVEFE-VKGEAYRAFWSQNRAR 102 ++ + +++R A AEV+F G + A W+ RAR Sbjct: 61 FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 N+ +G Q L A G++ + ++ + L GL + +F R+++L QG+FAAFL Sbjct: 121 NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 + ER+ LLE +TGTE+Y IS E+ + + +L + + V L+ + Sbjct: 181 KSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAIGQRLGDVALMDEATREQWV 240 Query: 223 ASLQVLTDE-----------------------------------------------EKQL 235 + L E++ Sbjct: 241 SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEAAHGAAAPEREE 300 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR----- 290 +Q Q + L E ++++AL + E K + Q +L + Sbjct: 301 FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEQTQQSALTEQQLLAKKI 360 Query: 291 -------NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 L+P +R E + +QQ++++ ++ ++ +Q +++Q Sbjct: 361 AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQRQQVEQ 420 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + W + ++ W+ + E + QQ LT E KL AL + Sbjct: 421 LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ 480 Query: 404 LTLTADEVAT-----------ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ-- 450 L + +++ LV Q Q ++L QL+ ++ Sbjct: 481 HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLVKAQEQWQGQTEQLGQLRQLLELA 540 Query: 451 -----------NVTQEQTQRNAAL-------NEMRQRYKEKTQQLADVKTICEQEARIKT 492 + QE Q AL +E+ + Q + + EQ I + Sbjct: 541 DYGHNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS 600 Query: 493 LEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ--SRLLALENEVKKLGEEGATLR 550 E R L+ G+PCPLCG+ HP ++ + + Q R+ +LE E ++L + Sbjct: 601 FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE 660 Query: 551 GQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS------LNITLQPLD-------- 596 + + +QL + L + LTQ+WQ + + L + +P++ Sbjct: 661 SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQRPIEWNELMSTL 720 Query: 597 --DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 Q ++QLR Q + + Q+ QQ EQ+ Q Sbjct: 721 LGRGQSLEQGLARSQQQLREAQQGQQQLQAVRQQLSQLTSQHQQFEQQWQEADRQRIALE 780 Query: 655 LTLPQEDEEESWLATR----------------------QQEAQSWQQRQNELTALQNRIQ 692 + E+E+ L R Q+ WQ+ Q+ + Sbjct: 781 GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE 840 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV--LAAQSLQKA 750 +LT + +L + E ++ Q+Q L L + + + Sbjct: 841 RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIAQV 900 Query: 751 QAQFDTALQASVFDDQQAFLAAL------------------------------------- 773 + ++ LQ + + AA Sbjct: 901 EIRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH 960 Query: 774 ----------------MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 M L Q LE+ R +A+T +T+ LA + R Sbjct: 961 ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY 1020 Query: 818 GLA----LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + +++ L R + + L Q + +L +++A Sbjct: 1021 REHHPELAALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGSLQEELAAQ 1080 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + W L LIGS G K R FAQ LTL+ L+ AN QL L RY L+R L Sbjct: 1081 QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA 1140 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 ++VVD D VR +LSGGESFLVSLALALALS L S +T+++SLF+DEGFGTLD ++ Sbjct: 1141 LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS 1200 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 LD AL +LD+L A+G+ IGVISHV+ + ERI VQ++V+ + G G S++ Sbjct: 1201 LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEAL-GGGESRV 1247 >UniRef50_B9EBU9 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU9_MACCJ Length = 1009 Score = 349 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 204/1059 (19%), Positives = 423/1059 (39%), Gaps = 91/1059 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L +++ K E IDF ++ ++ LF I+G TG+GKTT+ DA+ ALY Sbjct: 1 MRPIKLEIQHFGPFKNET-IDF-KQGLKNHTLFLISGKTGSGKTTIFDAMMYALYGTAST 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S ++ + D E + + +F +K + + + + + R+E+ Sbjct: 59 SSRNYKAMRNKHAYDEEETVIKFQFSIKDKQFLIIRNLPHIK-AGNKTPITSRLEVYEID 117 Query: 121 DGK---ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 D K I +K + +L + L +F + ++L QG+F FL + + + E+L L Sbjct: 118 DNKKRLISTNKKTETNQLIVDIVKLQADQFRQILILPQGEFKNFLVSDSESKNEILRTLF 177 Query: 178 GTEIYGQISAMVFE----QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 T+ + + E + + R + ++++ + + P + + ++ + + Sbjct: 178 DTKHLELMVKRLKENVDDKIDAIRMKEKEIEFHMQQLGVGFPPYMVTYDEQIRTVNLYYE 237 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL-SLAQPARNL 292 Q LN + + +L+ +A + + L + ++ + QLA L + N Sbjct: 238 ASQKVFSQNVSELNDRSNELKLKGDALKAAEILNNNIQSVKQHKHQLAILYEQREEIENT 297 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + +++ + + L+ I Q+EE+ + ++ +LQQ + +LN + Sbjct: 298 QKTVQQLVQFESYLSCI-SQLEELKKDNAHISVQKKDEEQQISENKDKLQQLKNTLNEVM 356 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 Q+ + ++ N+ ++ E +L + L+ + T + Sbjct: 357 QDDEEMKRLNHRLIELERFIDEKYQGLEEDVHTLNELKNETTALSDKLSSTHQVNE---- 412 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 + + L Q + + V Q R+ + I ++ E L +++ Sbjct: 413 ---SIQSSLEALIQEKTKAYEEKVDYQSRIRDNETII-SLINEYDSYCKELEVIKENQDM 468 Query: 473 KTQQLADVKTICEQ------EARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 T++L +++ E+ + +++ RAQL+ GQ CP+C + Sbjct: 469 LTRELLSCESLIERFNFGDDLLDVDAVDSIRAQLKIGQNCPVCNHIVTEKTDGVHHEYHN 528 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 + Q R+ + + + K L ++ +D Q + Sbjct: 529 LIQRRMTLSREQEASTTKAEWIENLKKTTTDKLLAYEQFNIAYEHEDMQNTGELLIHEQE 588 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE--LQGQIAAHNQQIIQYQQQIEQRQQ 644 L L+ L++ +D Q E ++ L+ I A+ ++II+ + E+ Sbjct: 589 MLTQKLETLNEHLNHIDHQYERLSNELKDNKISAISLKNAIDANEKKIIELNDEKERYHT 648 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + + + + + A ++ ++ L L I + ++ + Sbjct: 649 FV---------SFTGFENYDEFKAQFDEKRNLYKDYDRHLNKLNEMIVSCSELIRSKENI 699 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + + + Q+ + H + + + + ++A Sbjct: 700 VDKYNTHLIYNEKLLSQLEATKHSFHISDKIVDE----------YMDKDIEQEIEALQIT 749 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 + + E T+ LE L G Sbjct: 750 VESYYKDMHFHENTIKSLEDLI-------------------------------GGEQAPD 778 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +E++ E A+ K++E + + R QLK + Q + + + + + L Sbjct: 779 IERLTTEYAELSSKVKEFEQAINDERSQLKLMNNIIMQLEVVHSSYVKQMEDIGSEIKLF 838 Query: 885 SLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR------KASEALEVE 935 ++ K K + L+ ++ LAN++L ++ H RY L R + LE+E Sbjct: 839 EVLNGKNTLKLSIENYVLVYYLEQILLLANERLLQMTHNRYKLVRKKEVHSRKKSGLEIE 898 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + + VRD TLSGGE+F+ SL+LAL LSD V S ++S+F+DEGFGTLDS+ Sbjct: 899 VFD-YHTNNVRDITTLSGGETFIASLSLALGLSDYVMQISGGINLESVFIDEGFGTLDSD 957 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 TL+TA++ L L +GK IG+ISHV++++E +P +KV+ Sbjct: 958 TLETAIEVLIELQQTGKLIGIISHVQSLQESMPAILKVE 996 >UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWI8_9FIRM Length = 1024 Score = 349 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 217/1065 (20%), Positives = 385/1065 (36%), Gaps = 70/1065 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ S + +DFT + F I G TG+GKTTLLDAIC A Y E Sbjct: 1 MRPLRLTMEAFGSYGKKTVVDFTE--LGARSFFLIHGRTGSGKTTLLDAICFAFYGEASM 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-------- 112 A + F + + Y + + R + DG P Sbjct: 59 AGRTGTMMRTDEAPREARTSVDFVFALGTQKYHICRTPSYERMKKDGTGLTPVQASAMLW 118 Query: 113 --RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 A + ++LA + + L G F + +LL QG F L AK ER Sbjct: 119 QVEEGEAAENEERVLAQRPSSVTQKMTELLGFGPAEFRQVVLLPQGAFRDLLTAKVDERE 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 LL L TE Y ++ + + K+ +++AQ LL SL A V + Sbjct: 179 ALLAMLFKTERYRRLEELFKSRAKAMEARRAEIKAQEG--ALLAGGAADSLDAHRAVSEE 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 +EK L ++Q +QE R + L + + + R Sbjct: 237 KEKTLAVLEKQAAALQEKQEAAQCAEQEGIRAAEILTRWEKARKTLADHEKKRGSVERYR 296 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 +R A+ A + E+ R ++ A + R AA + + Sbjct: 297 AQLEEAQRAAQIEDVAAGAARDREKAKER-EAECAAQEKRREKAAHELKRAEDALVHEKA 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 E + + + + A R + ++ A +K A L A+ Sbjct: 356 REGELEEGKAKVRKLEEYGACAIDLAQARARAKSREEAAHEAAEKAAQAKAAQEKLAAEL 415 Query: 411 VAT-ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 +A + +R + ++L +++ Q ++ + + E + Sbjct: 416 LALGTREKELAERAAKAEGLSLALAQKEKEREARQNLALLKKRAAKAQEAAEIAGEKARA 475 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 +E+ + + E L+ G+ CP+CGST+HP A + P Sbjct: 476 AREEHETKRRNQRALEHVYMEGQAALLARSLEDGKACPVCGSTAHPHPTASKDEVPEKAD 535 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 + +E +K + A L E + ++ T+ ++ A++ Sbjct: 536 --VERARSEAEKAEKAREKAEKAQTAAEADLAAVRGELAAAQKSLTQTTEDAGSLAAAI- 592 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 LQ ++ A Q + ++R+ L Sbjct: 593 -----------------------------ASLQAEVKAAGQAAAAQKAAADERETLASRL 623 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 A E+ Q A + Q++ L + + L + Sbjct: 624 AQAEAAEKEAAKGAEAAKGEAAQAAGALQEKSASLPEAYREPKAVEMALAAARRGVAERE 683 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 + + ++ A + + + L + +K+ A L+ + F D+ AF Sbjct: 684 KALAAAQDAFSGAGKELAAAKAAAEAAKTTAALTQEEARKSAALLAERLKGAGFSDEAAF 743 Query: 770 LAALMDE-QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 A L T +++ + + + + P D + ++ Sbjct: 744 RAVLTGHFATAEGRKEVSDRIRAYEDKRTAFAEAEKKAAEEAAGIAPPD-------LAKL 796 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 + + T + Q+LK+ +Q Q L + A + G L + Sbjct: 797 KAAREEAAAAWTAGTREAAALAQELKERRSREEQLQKLTLEAASLEAAYHTTGRLAEVAA 856 Query: 889 SKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS-------EALEVEVVD 938 + + F+ + L ++ ANQ+L R+ HG+Y L+RK L++E+ D Sbjct: 857 GQNPHRMHFQTYVLRSILADVADAANQRLLRMTHGQYRLERKEGVVDMRRSAGLDLEIFD 916 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 R TLSGGESFL +LALAL L+D+V + R+D++F+DEGFGTLD+ETLD Sbjct: 917 E-NTGYARPMATLSGGESFLAALALALGLADVVTNYAGGIRLDTIFIDEGFGTLDAETLD 975 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 A+ L L G+ +G+ISHVE +K RI V+++V+K ++ Sbjct: 976 LAIKTLMDLQKGGRLVGIISHVEELKNRIDVRLEVEKGEDGSTAR 1020 >UniRef50_A1ZW09 ATPase involved in DNA repair, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZW09_9SPHI Length = 1028 Score = 349 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 196/1059 (18%), Positives = 416/1059 (39%), Gaps = 59/1059 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L L+ + S + + +IDFT+ +GLF I G G+GK+T+L++I ALY + R Sbjct: 1 MIPVKLTLQGVYSYQKKAEIDFTK--LTDSGLFGIFGMVGSGKSTILESISYALYGQVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ + +LM + E L + EF+ Y F + + ++ ++ + Sbjct: 59 LNKQDKVTYNLMNLKSNELLIDYEFKASDNEYYRFVVEGKRNSKNFEKIRTFDRSHYQMV 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+ + L Y F R++++ QG+F FL +R +L+++ G Sbjct: 119 KGEWTPTDKTA-----QDILELSYDNFRRTIIIPQGKFQEFLQLGDTDRTRMLKDIFGLG 173 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + + K ++ +++ + GV +T E + L+ L + Q Sbjct: 174 KY-DLGQKLRPVEKENDEKITQVETKLQGVAEVTEEGINEQRGILKELVASLEAQQNQLQ 232 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ----PARNLRPHW 296 ++ L + L E + +++ L + + + + + +L Sbjct: 233 EKSTKKTALEQIKALFAELAHQKEELARLKQQADDFNSLERRVKEYETCLYQFSDLLETH 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 + L + QQ E ++Q + Q E + +Q ++ + + Sbjct: 293 KLTQVKIKQLQELIQQKETHFEQIQQKLVQDEQSFEEVKTQYNERETIKQKIDEFTKIIS 352 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD------- 409 + +E ++ + T E K + L + Sbjct: 353 INELNKELVTLEERVEKGKPVIKESEKKIVKLQTEIEDKTFFIKRQKENLPDNNVLLAVS 412 Query: 410 ----EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 E L+ + +H+ +I ++K L + + L + Sbjct: 413 SWFAEKKKILSSIQKVNQETRHIEREIEKIRKEKKELYEEHLRDLLPEAHPKTIIGELAD 472 Query: 466 MR-QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 M + E +L + L+ L G+PCPLCGS HP L+ Sbjct: 473 MILDKRDELKDKLMHTQHKLSGLTIKLKLQEYAENLSDGEPCPLCGSVHHPDP-----LK 527 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 P + L A + + + + L LD ++++ + + ++ + ++ QA Sbjct: 528 PDKIDAALHAFQEARETQDVQISLLTDLLD----KVRQLKVQIDEKKKQLERRDEEAQAE 583 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 ++ L + +P D D E + ++ LQ I +++ Q Q+ +E+ ++ Sbjct: 584 ANKFDLHLYKFN-WKPAFDP-DHDEDVEKKKAKASRLQNAIDDADKEREQMQRSLEEERK 641 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ---QRQNELTALQNRIQQLTPILETL 701 L T A Q+ + + L T +++ + + Q+ + L+ I+ L + E L Sbjct: 642 KLDKYKTAIADLENQQLTKTTQLKTLKRQLRVFDLEDYAQHAASQLKQEIRSLEDLYERL 701 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + + + Q + L S + ++ + Q+LQ Q++ L S Sbjct: 702 ERKYKNLETQ-------INEDRNQKVRLESDLRNSRENLLQDEQNLQTNQSKLQDRLAKS 754 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 FD + L ++ + + Q + + + +A E + + + Sbjct: 755 DFDTLETVENILQNKLDIERENQKIKEFQTKLHRA--------EDECHKLERQTAGKVYN 806 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 +Q+ ++ + ++ +G ++ ++++ + ++ L + + + +D Sbjct: 807 EAEYQQVLTDIQSLKEDIQVKQDRRGGLKSEIERLESDLARKFKLQKHADALHLRRDDIS 866 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 L + F + + + NL +LAN++ RL + L+ + +E + D Sbjct: 867 TLKKMF---RESGFVNYISSVYMQNLCNLANERFYRLTKQ-QLKLEVNEDNTFYIRDYLN 922 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSETLDTALD 999 R +TLSGG++F +L+LALAL+D + K+ + FLDEGFG+ D E+LD + Sbjct: 923 NGQTRSVKTLSGGQTFQAALSLALALADNIQQFTKSNQNFFFLDEGFGSQDEESLDAVFE 982 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L +L + +G+ISHVE+++ I V +KV+ G Sbjct: 983 TLTSLRKENRIVGIISHVESLQREISVYLKVRNQEETGS 1021 >UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES7_EXIS2 Length = 1002 Score = 349 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 229/1059 (21%), Positives = 401/1059 (37%), Gaps = 78/1059 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+ E IDF +F I+G TGAGKTT+ DA+ ALY ET Sbjct: 1 MRPERLTLRAFGPFADEQTIDF--RALGGRTMFVISGNTGAGKTTIFDALTFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR--NQPDGNLQVPRVELAR 118 + + E+EF++KGE YR + N+ D + Sbjct: 59 GEREMSDLRSHFAKPEQKTEVELEFQLKGERYRIIRQPGQPHPVNKTDYGHEAELAR-HD 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 K LA K+ + + L LD+ +F++ +LL Q +F L A+ K++ ++L++L Sbjct: 118 GTSWKPLALKIPEIRQQVQELLQLDHKQFSQILLLPQNKFRELLMAESKDKLQILKQLFK 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 TE YG+ + + +++ + + P + A+ + + L+ Sbjct: 178 TEHYGEFQQRLHRKALDLAATIKETKTKQLAKLEELPLDLNWSEATETTIRHQTDTLLAT 237 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 ++ + + + Q + + L+QA E+ L L Q P R Sbjct: 238 LDEKIEQAKTVEQAGR--QTLEQLTERLRQAEQLEQTFTEYDQLLHLEQQLALTLPETMR 295 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 E A + I+ V QS + +EL+ QQ L+ + +R Sbjct: 296 QKEQYDAASRAA-AIQGVYETFQSEEQTVRQLTGTKQTVESELEHLQQQLDQVNRTVERL 354 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 E + Q + + L+ +Q + + A+A + ++ + Sbjct: 355 TVQEPEMREASRRLEQIADELKRLQDQEQLIRQQQDLQRAVAQLNPDALREQRTRQRSDR 414 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ--RYKEKTQQ 476 + L + Q+R LQ Q + Q L + R K + +Q Sbjct: 415 TRLQAEIARLSDDSSTRLSLQERRFVLQSIEQKQQEWQRNEAERLRLIEHGTRVKAEKEQ 474 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE-AYQALEPGVNQSRLLAL 535 T Q R + L G+ CP+CGS +HP + + L+ L Sbjct: 475 AERTYTAGRQHERRQLAAELAGHLDDGEACPVCGSATHPQLAVKTEPLDVEALHQAYLTA 534 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 ++ ++L T+ + + +L + Q + D A+ + + + Q Sbjct: 535 QSAHQELQATYRTVSERKRQLEHEL-ATLADGQPVPNDVTAIRTEINDLKNQESRLQQQQ 593 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 + Q E L ++ E + + + QL L L G Sbjct: 594 ERKQQLEQQLRTIETALEQADRKIEEET--------------DRQSKLQLELARLEGILN 639 Query: 656 TLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVV 715 P +Q + + + TA QN+ Q+L Sbjct: 640 RNPDAPSRRDLETEQQTLTKRLAEFEAARTASQNQKQRLD-------------------- 679 Query: 716 LENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 + A + Q ++++ + +A+A +LQ F+ + F A M Sbjct: 680 --------QDIAARRGRLQHVEEELTIHMAKRTEAEAALARSLQEERFETVEQFEQARMS 731 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT 835 +EQL + LE RR+ Q + + Q D AL V Q + EL Sbjct: 732 ---RQAMEQLAERLEADRRKRQDVESGLERIRQLILQQDRPDLAALRPVVRQAEAELVT- 787 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK- 894 G +++L L QQI + G L + + + Sbjct: 788 -----ATDGRIGVEKERL-HIKQLVDAWSGLQQQIEAEDARYGIIGELARVGVGENAQRM 841 Query: 895 -FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE-------ALEVEVVDTWQADAV 945 F + Q D ++ AN+ L + GR+LL+RK L++ V D + + Sbjct: 842 TFETYVQTAYFDEILQAANRHLHGMTSGRFLLERKTEAGKGLKKYGLDLNVFDAYTSQ-T 900 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R +TLSGGESF SLALAL LS++V S ++++F+DEGFGTLD E+L+ A++ L Sbjct: 901 RHVKTLSGGESFKASLALALGLSEVVQEASGGVSLETMFIDEGFGTLDPESLEQAIETLL 960 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 ++ ASG+ +G+ISHV+ +K R+ +I+V + +L Sbjct: 961 SIQASGRMVGIISHVQELKSRVDAKIEVTQGKTGSTIRL 999 >UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum RepID=C6VPR9_LACPJ Length = 1061 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 217/1098 (19%), Positives = 404/1098 (36%), Gaps = 99/1098 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + IDF++ S +F I+G TGAGK+T+ DA+ AL+ T Sbjct: 1 MKPVYLAMNYFGP-HEHSIIDFSK--LESTPIFLISGDTGAGKSTIFDAMTFALFGSTTN 57 Query: 61 LSNVSQSQNDL---MTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 ++ ++ FE + Y+ S + + G+ + A Sbjct: 58 DGTDGRAAKEMRSQFAPADQPTSVTFYFEQGNQLYKIARSPEQYLAKKKGSGLTKKNSTA 117 Query: 118 RCA--------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 + A + + +A K D T+ L +F + +LL Q F+ FL +K ++ Sbjct: 118 KLAVVDHVGGVEIESIATKPADVGPEITTILNLTADQFKKIILLPQNDFSEFLKSKTTDK 177 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTE----LEKLQAQASGVTLLTPEQVQ------ 219 ++L+++ GT++Y +A + ++++A + L+ + T EQ Q Sbjct: 178 EKILKKIFGTQLYSDFTAELKAEYQTASKTGDQFVADLRVALASATWNDEEQAQLQAVPD 237 Query: 220 ----------------SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 + + Q + + A+ QQ+ + + D L Q + Q Sbjct: 238 NQKIPLLRAFVTTRQSAFDQAQQTTIKINRSVKAAETTYQQARDRQQQFDRLTQAQADYQ 297 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 +++ A+ QL AL+ AQP + + L +Q + + Q Sbjct: 298 TKVEEQTPAITIAKQQLHALTWAQPLQATMQALTQQTRDQKQLTLDQQAAMDNVQQAQDD 357 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 + QS Q Q L + ++ + A + Sbjct: 358 YRQAQAAVQQLHDQSEANHQHHQRLEQLATLIPQAQRVESLIAQLAKLKPSVADLKATFE 417 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q Q + K+ A ++ L L Q L Sbjct: 418 QHQTVIKTLTAKITTQQANLPSID---------------DLHATKDLLIKQREQFVDTLT 462 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKT---LEAQRAQL 500 L + QEQ + L ++R + Q + + EQ+ + + + +L Sbjct: 463 PLDSQWRGAQQEQQRVTKQLTDLRAQLARDEQNQHNAQVQFEQQRGQRQSLMIAQLQQEL 522 Query: 501 QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 GQPC +CGST H N++ L V A Q++A +++ Sbjct: 523 VDGQPCVVCGSTDH---SQMPVTTIVANEADLRQSMQAVDDAQNALAAANKQVEATQQRV 579 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASL-NITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 ++ E E Q Q + L L + QL ++++ Sbjct: 580 EQAEKEVDQATQQVTTAQTQLTSTYQQLIETNGLALKSPYDLTAVRAFFAEQLATITKKL 639 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 E ++ I +Y ++E +Q+ T + + L Q + Sbjct: 640 EAAQRVVQA---IDKYTAELEAQQKQAQQTELQLGEQQALLRNKTADLTVAQAAIGT--D 694 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 Q L L I+ T Q E + + L+ + +T Q Sbjct: 695 LQVTSADLLAEKAHLNQIVATYQQRLEAAQATVQTSQLTLSKHQTKLDDLNDRLKTTQAT 754 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 Q++ +A A + Q L ++E +L L+ + R+ + L Sbjct: 755 RTQLEQTIAQALAAPEAP------THDQTVLENWLEELANGRLTALQVQIATYRQDKERL 808 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 T+ + + + IQ +LA SQ Q L Sbjct: 809 TTEIKQL-------QTALTNVERPNITGIQAQLADLQAHKDRALQSQTVAEQALTDAQSC 861 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD----KFRKFAQGLTLDNLVHLANQQL 915 ++ Q +M Q ++ + L +++ K+G+ K + L +++ AN Sbjct: 862 LEKVQQIMHQQGTFAKRFAEITSLYNIMTGKDGNDHKLKLETYVVQNYLQRVLNYANDHF 921 Query: 916 TRL--HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L + RY + ++ L++ V D ++ R + TLSGGE+F+ +L++AL+ Sbjct: 922 INLLSNNRYTFELAAEASDNRSDHGLDINVYDNETGNS-RSSNTLSGGETFIAALSIALS 980 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 LS++V ++ +ID+LF+DEGFG+LD ETL+ A+ AL+ + + +GVISH+E+MK Sbjct: 981 LSEVVQSSANGVQIDALFVDEGFGSLDDETLEKAMQALETI-GENRMVGVISHIESMKRT 1039 Query: 1024 IPVQIKVKKINGLGYSKL 1041 I Q+ +KK+ G G S + Sbjct: 1040 IGQQVLIKKM-GDGRSTV 1056 >UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C1D7_LISGR Length = 1014 Score = 348 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 226/1071 (21%), Positives = 428/1071 (39%), Gaps = 100/1071 (9%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 ++ + G+ IDFT +F I+G TGAGK+T+ DAI A++ + S Sbjct: 1 MQAFGAYAGKETIDFTE--LQHEQIFIISGKTGAGKSTIFDAISFAIFGKNNTSDRDGIS 58 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELARCADG-- 122 + F++ +R + + + G + L DG Sbjct: 59 MRSHYASADELTEVSLLFKLGTRIFRIERTPQQEITKKRGEGTRTVNQKAVLYEIMDGEE 118 Query: 123 KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIY 182 K+LA ++D + L L +F + +++ QG+F L + KE+ +L+ L T IY Sbjct: 119 KLLASAIRDVDSKISELMQLTVDQFRQILMIPQGEFRELLTSDSKEKEAILQRLAHTYIY 178 Query: 183 GQISAMVFEQHKSARTELEK------------LQAQASGVTLLTPEQVQSLTASLQVLTD 230 Q+ ++E+ K E+++ L +A + T E Q + + Sbjct: 179 KQMEDKLWEKEKKLADEIQQKRQAVILLAENGLDEKAMLSGMTTEEISQQFQTEISQKEE 238 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQE-------ASRRQQALQQALAEEEKAQPQLAAL 283 E+ + ++ ++ + + L + R Q L Q A++E + Q+ L Sbjct: 239 EQIESELQLKKVRKEADEAAEKWTLAKNIQTDFQYLERYQAELAQFEAKQEAVESQIHTL 298 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 A+ A L+ + A L +++ E+ L +IR K+S ++ Sbjct: 299 QRAKQALRLQSQDANCIQLKARLTKRERELAEIERELAEATTRLQTIR----KESDAIEA 354 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + + + W A + ++ E L + L Q++ L Sbjct: 355 KAGWIEERRKTFYYLENLEPKIIKWEA--LKTKAEDEQLAKLAAALEQNAQQIKDLEQQ- 411 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 D L + R + A + + ++ Q + ++Q L Sbjct: 412 -KAGFDRQKEQLVDVEINQLKRANESAQQERELEIWRQKKQQLAELTIYREKQASTLGQL 470 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 Q+ +Q+ E + + + L G+ CP+CGST+HP + + Sbjct: 471 AAYEQQLAPLEEQV----EALESQQKNQQAAVLAGHLHEGEACPVCGSTTHPELAVFSNE 526 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + + E+ L+ + + + + Q+ + L ++E ++ A Sbjct: 527 VDL----------ELLAQTQEDLQHLQSKKEQLKAENQQITWQMSQLTREELPNAEEINA 576 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH-ELQGQIAAHNQQIIQYQQQIEQR 642 ASL LQ L + + ++ L L ++ Q ++ + Q + ++Q+ Sbjct: 577 NIASLTEALQKLASQAAEAERMLQTKQTLHLEIEKAIAAQQELEQTITKQQQSYETLKQQ 636 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + + T +P + QN Q + Q I+ Sbjct: 637 SEQIAAERTFLEQEIPA-------------------EYQNLQKFQQEKQQLQEQIVSHDK 677 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 Q+ +L E + E+ + + ++Q Q L + +A F L+ Sbjct: 678 QAKQLQ--------EELHSIIEEVSRKDAAKGNVKQDMARTQQELDEERASFKQLLKEQE 729 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F A+ A + ++ + +LE+ Q +N A++ + LA Sbjct: 730 FASYDAYKQASLTDEEMDKLEKQIQAFQNDFEIAKSRYQDLSTKLAN-------TTYPDL 782 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E++ QE Q ++L E T +R +L +N Q+ + M +A+ Q+ + G+ Sbjct: 783 DHLEEVWQEKQQQRERLEEQTVK---LRDRLTFKRENFQRFEKEMHHVAKQEQKYAELGF 839 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEAL 932 L K K F ++ G LD ++ AN +L ++ GR+ L RK A L Sbjct: 840 LADTARGKNERKLTFERYVLGAFLDTIIERANLRLAKMTGGRFQLSRKLDRSKGNAQSGL 899 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 E+EV D + +R RTLSGGESF SLALAL+L+++V + ++++F+DEGFGTL Sbjct: 900 ELEVYDAYTG-YMRHVRTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFIDEGFGTL 958 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 D E+L+ A++ L SG+ +G+ISHV +KERIPV+++V N ++ Sbjct: 959 DPESLEMAVECLLETQESGRLVGIISHVPELKERIPVRLEVTATNHGSTTE 1009 >UniRef50_C9XND8 Exonuclease subunit C n=7 Tax=Clostridium difficile RepID=C9XND8_CLODC Length = 1179 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 208/1196 (17%), Positives = 438/1196 (36%), Gaps = 171/1196 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L LNS + IDF E GLF I G TG+GK+T+LDAI +A+Y Sbjct: 5 MRPIRLELTGLNSYIDKQVIDF--EKLIERGLFGIFGTTGSGKSTILDAITIAMYG---- 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 N+S++ + + + + EFE+ + R + +R + + L Sbjct: 59 --NISRNTKEYINSVCDKAIISYEFEIGSKNTRRRYIVDRTIARSKTGTKTSNARLIEVL 116 Query: 121 DGKI---LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + I LADKV + E A + GL FTRS++L Q +F FL +R ++LE + Sbjct: 117 NDNIQNVLADKVVEVNEKVAQVVGLTANDFTRSVVLPQDKFNEFLRLSRADRRDMLERIF 176 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E YG+ + V ++ L+ L+++ S +T E ++ L L + EK Sbjct: 177 NLEKYGRSLGEKVKKRKNIQLQNLKDLKSKLSQYDGITEEVYNNINQELIELKNLEKDKN 236 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 A Q+S E Q + + + + + + + ++A + A+ + P+ Sbjct: 237 NALDLAQKSYEESKTVYEEQLKLEKNELRKNELDLKNSEIKEKIALVENDSNAKKVDPYI 296 Query: 297 ERIAEHSAALAH--------------IRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 + + + Q++E R + ++ +++ LQ Sbjct: 297 SSVQNLEKKIDEDSFVVSNLEKKLAILNQELEVTKNRYEKINKIKNEEVPKLSEEKIRLQ 356 Query: 343 QQQ---------------------------------------------QSLNTWLQEHDR 357 Q +S+ + D+ Sbjct: 357 QAIKLEEELVLLDRELKDLKESGINLNKTKVELEKVKQVSESRKDAVTKSIKEVEGKIDK 416 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT---------- 407 + + L + Q+L E+ L I L + Sbjct: 417 VNISAELKQKIFLAYEYEKDYNNVLEEKNQKLNKLEEILKETENINLKVRYIDKDKNDVN 476 Query: 408 -------------ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 + A + L + + + + +Q ++ + + Sbjct: 477 RNLENLSLHLDVLLKKCPGKSADLLLKSEYVTELRSKANNTKENEIKKSSIQDELKIILE 536 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 + +N + ++ + + D++ E+ + R +L+ PCP+CGS H Sbjct: 537 SKFNTEREVNLLNEKLENNRKNRDDLEKELEELKYLNLASELRRELKENMPCPVCGSKHH 596 Query: 515 PAVEAYQALE--------PGVNQSRLLALENEVKKLGEE--------------------- 545 + E + +++ N +++L + Sbjct: 597 ENHNITKYDENISFVKEKLEKLEKEKISIRNNIEELNAKVSGYLSIEKMKTKELEDVKGK 656 Query: 546 -----GATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 + L +LD ++L ++ Q +++++ + N + I+ Sbjct: 657 LGGIPSSQLLKKLDEEQRKLALLKSNIQEWEKEKESTENKVTLAKEEKNKIEKEELKIRE 716 Query: 601 WLDAQDEHERQLR-----LLSQRHELQGQIAAHN-----QQIIQYQQQIEQRQQLLLTTL 650 L+ + R L L ++ +L+ + ++ ++I + ++ L Sbjct: 717 SLNNYKKLTRDLNIEIEGLENKCKKLKQEYLGLKTITKVSNLLSKVKEIRENEKELELLS 776 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ-----------------NRIQQ 693 TG++ L D + + + + + + L + Sbjct: 777 TGHSNLLKNRDSLDIKIRENESKLHEIEIELIKARELYVEKKLSRDNKYKEVINITKGDL 836 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 +L + ++ +E + + + +++ + + A + + ++ Sbjct: 837 AKNLLHNVEENICKILEQEESSKKKLEEQRLEYEKNIAEKHNIDGRLKTAKEQYKDQKST 896 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + L + F+ A AL+D + +L + E +++ + + E L Sbjct: 897 LNKLLAENKFESIYAVKRALLDTDAVKKLIEEILEHEEEQKLLSFKIKSSKEKLNGRSIK 956 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + EQ++ E+ ++ + G + QL D+ + +Q+ + Sbjct: 957 K--------EYFEQLKDEIYNLKVEIGNISKDIGANQNQLITLKDSLDKINDFNKQLKVV 1008 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEAL 932 V+ L+ +G+KF ++ L + A+++L + GRY L+ L Sbjct: 1009 EHNVDLLEELDK---CVQGNKFVEYVSTNQLKYIALEASKRLDGITKGRYALE--IDSTL 1063 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLD 990 + D + R TLSGGE+FL SL+LALALS + ++ FLDEGFG+LD Sbjct: 1064 NFVMRDNFNGGERRSIDTLSGGETFLTSLSLALALSSQIQLKGSAPLEFFFLDEGFGSLD 1123 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 SE L+ +++L+ L+++ ++G+ISHVE +K R+PV++ V SK++ ++ Sbjct: 1124 SELLEIVIESLERLHSNNLSVGIISHVEELKNRVPVKLLVSSSEAGIGSKVKIEYS 1179 >UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=SBCC_STAS1 Length = 1009 Score = 347 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 196/1059 (18%), Positives = 409/1059 (38%), Gaps = 91/1059 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L N E IDF +N LF I+G TG+GKT + DAI AL+ E Sbjct: 1 MRPIKLNLTNFGPFLNET-IDFNNVE--NNQLFLISGKTGSGKTMIFDAIVFALFGEAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR-NQPDGNLQVPRVELARC 119 + E EF+++ + ++ + + L V Sbjct: 58 KDRKESDLRSHFAESKKPMVVEFEFKLRNQYFKIQRQGAFIKEGNKNKTLGQLAVYQYEQ 117 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D + K+ + L G++ +F + +L QG+F FL +K E+ ++L L + Sbjct: 118 DDYALRESKINSGNQFIKALLGVNAEQFRQLFILPQGEFKRFLLSKSVEKQDILRTLFNS 177 Query: 180 EIYGQISAMVFEQHKSARTELEK----LQAQASGVTLLTPEQV-QSLTASLQVLTDEEKQ 234 + + +I + + K R ++EK L+ + E + + S + + K Sbjct: 178 QRFEEIQKKLSDDVKEVREQIEKRYNDLENHWKELETFDDETLCEHKVISARQTNNIIKV 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L + + Q + ++ E+ + + + E A +L Q L Sbjct: 238 LPDFKMKAQIIRDDFEQKKEILKNKVNSTENALNNNIKLEDALNKLN--ENQQKYEALLV 295 Query: 295 HWERIAEHSAALAHIRQ--QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + I E + I + I + ++T++ + + ++S + + + Sbjct: 296 NENEIQEKVKRVTEINEVRPITNLLEVKENTISKKGKVAQSIEEKSKSIFDLEDKIKQSN 355 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD--E 410 E D ++ ++ R Q E +++ + + A + LT E Sbjct: 356 LEADNLKEKQDDIEELRRFIEQTQLFFEKANKYKDAYNNYQFTKTAFTDLEAHLTQKNEE 415 Query: 411 VATALAQHAEQRPLRQHLVALHGQI------VPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + A+ +++P + + + I + Q K+ + ++ + + + Q+ L Sbjct: 416 IKDTTAKLNQRQPDYRKIEQITEAIYNLNNDIKQLKQNEKDKIEYDALEKRKMQKQRNLK 475 Query: 465 EMRQRYKEKTQQLADV-KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 ++ Q+ + ++ ++ K+ + + + +A L G+ CP+CG+ H Sbjct: 476 DLSQKRVQLNEEYNNIDKSKLDLNNKQDVIATVQAALHTGETCPICGNEIHTLSSHVDFD 535 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 E +L LE ++ + + +L I +QL + SL Sbjct: 536 EIMERHQQLTLLEEKIATVKGDIIKCESELSHIEEQLSK--YTIASLENI---------- 583 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + +DE E++ + + E +I Q+ QY++ Q Sbjct: 584 ----------------NYEALEDEVEKKYQEKKKIDEENNEIEKLKDQLQQYEKSSHDLQ 627 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + ++ E+ + + + N+I+Q L + Q Sbjct: 628 MNIQKKEHILKENETAINDFEN-----TTGYKRVDEFLTKFEDAYNQIRQFDQTLNEIEQ 682 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + + + ++ + + + + +Q F Sbjct: 683 KIQNYKSTLAIEKNSVTYLKNNLAEIETE--------------INETDMKINEEMQRIGF 728 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + LE+ + + +++ + + Q A+ + DD Sbjct: 729 TSIEQVEKVTAQASEKQNLEKEIETFKKEKQSYELYIAQLK---AETNNKKLDDT----- 780 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 +Q+++ + Q +T + +++ ++ + ++ ++ Q ++ L Sbjct: 781 --QQLKERFEEMQQVYETASTELSQHDYKMEFNSKKITEINKIIDELNSELQSQQEVFQL 838 Query: 884 NSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEVE 935 ++ K K + L+ ++ ANQ+L + G RY L R+A LE++ Sbjct: 839 AEILAGKNEQKLTLENYVLIYYLERILTQANQRLAIMTGQRYQLTRRAQISQGYSGLEID 898 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGFGTLD E Sbjct: 899 VFDAH-SNQSRHITSLSGGETFQASLALALGLSEIVQQESGGISLDSMFVDEGFGTLDQE 957 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 TL+TALD L +L ++G+ +G+ISHV +K+RIP+ ++V Sbjct: 958 TLETALDTLLSLKSTGRMVGIISHVSELKQRIPLILEVT 996 >UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clostridium kluyveri RepID=A5N4G0_CLOK5 Length = 1164 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 212/1183 (17%), Positives = 431/1183 (36%), Gaps = 160/1183 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL++K LNS + +IDF E G+F I GPTG+GK+T+LD I L+LY E R Sbjct: 1 MKPISLKIKGLNSFESSQEIDF--EKLTERGIFGIFGPTGSGKSTVLDGITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV---KGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 S ++ + + +F++ K + YR R + + R+ Sbjct: 59 KS------SNFINVNCNNLYVSYKFQISEKKVKTYRVEREFRRDQKSGSVRSKTARIISI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 KIL + K+ E + GL FTR+++L QG+F+ FL + K+R +LE L Sbjct: 113 EDNIEKILEEGSKNVTEKCQEILGLKLEDFTRTVVLPQGKFSEFLRLEGKDRRNMLERLF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G + YG +S + ++K + + +L+ Q G + E ++ ++ L + ++ Sbjct: 173 GLQKYGDNLSFKLNLKNKEEKMKFHELEGQLKGYEGINEEILEVKMMQMKQLENSYEETK 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 ++ N +LQ E ++ L+ E + + + LA+ ++P+ Sbjct: 233 KEYNYLEKKYNDENDLWKLQLELEQKSYELELLTKRENEIKNYEKKIKLAEGTLKVKPYA 292 Query: 297 ERIAEHSAALAHIRQ-------QIEEVNTRLQSTMALRASIRHHAAKQ-------SAELQ 342 + SA + + +I + L R K+ +++ Sbjct: 293 DNFKNTSAQIKITKDNLSNLNIKINSIKKNKNEIEILLNEARDKKDKKLPELKVKEQKIK 352 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT--------------SDREHLRQWQQQ 388 + + N+ + +F+ + ++ + + + Sbjct: 353 DAIEEQKLLEKLRQEKILLENDIESLKEKFNNKNDQVITNENYTSNLLNEMKTKEKLIET 412 Query: 389 LTHAEQKLNALAAITLTLTADEVATALA---------QHAEQRPLRQHLVALHGQIVPQQ 439 L +E+ + +TLT E + L I + Sbjct: 413 LKISEEYREKINEGIITLTNYENKILQRDKLIESIKNCEENIKAAVYRKEILLKHINEIE 472 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK---------------------------- 471 K L+ + + + L QR Sbjct: 473 KTLSHCNTRLNILIKTCPGDENTLLNFHQRLSYFKTKWDKYNEYMDLLDKNKGMVENLEK 532 Query: 472 ----------EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + +++ Q R L+ G PCP+CGS H E + Sbjct: 533 DLRNITAFESNMRNSIEELEKKIYQFERDNMAIMLIHTLREGDPCPVCGSVYHEKKEMGK 592 Query: 522 ALEPGVNQSR---------------------------LLALENEVKKLGEEGAT------ 548 + + + +E KK+ E G Sbjct: 593 IDRDNLEKLKSHCLEKKNKIEKSTKETIEIRTNIALKRKNIEENKKKIEELGEDFKSTPI 652 Query: 549 --LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV----TASLNITLQPLDDIQPWL 602 L+ + + +Q+ + E + ++ +AL ++ L I ++ + Sbjct: 653 KILQDKFYKLKQQIYEFKREKSLIEEEIKALKDNKNSLDIDYNKELTIEIENSTQLIKLQ 712 Query: 603 DAQDEHERQLRLLSQRHEL-------------QGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 E Q++L+ + L +I ++ ++++++ ++ + Sbjct: 713 QDLKLEEEQIKLIKDQLSLLKADLSVEDLKNKANEIIETQKRTSSLEREVKKIRKTIEVK 772 Query: 650 LTGYALTLPQEDEEESWLATRQ----QEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + E + L+ +Q + +S +++ + I L + Sbjct: 773 QSEKDEIRYYITELKEKLSEKQTRTREMNKSIVEKEYNIKNKVGEITDLNHFNREVCNLI 832 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E E + R++ ++ ++++ Q V + K + + L F+D Sbjct: 833 EKIESEYIKTEKTARKIIKEYDEINNKIILAQSNLVNLNERNIKEEKNLKSILYEQGFED 892 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 M++ + +L + Q N + + + + + + Sbjct: 893 IYEVEKFFMNKSEIEKLNKEIQEYRNSISRIKGAIENIYKNMKGRTLTKD--------QW 944 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + Q + + +L + + + +++ + + L+ + ++ ++ L Sbjct: 945 YKTQNDKNKKSYELEKLYEDKITLNKEVTSINTRLLELKDLLNKKKKIEHKLALLSDLEK 1004 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADA 944 L +G KF +F L + A++QL + G Y L+ E + D Sbjct: 1005 LF---KGKKFVEFIAANQLKYISLEADKQLREITCGNYGLE--VDEDGRFFIRDYKNGGK 1059 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 RD TLSGGE+F+ SLALALALS + ++ ++ FLDEGFGTLD L+ +D+L+ Sbjct: 1060 ERDASTLSGGETFVASLALALALSSQIQLKGRSPLELFFLDEGFGTLDDNLLEIVMDSLE 1119 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKV-KKINGLGYSKLEST 1044 ++ +IGVISH+E +KER+PV++ V +G+G SK+ Sbjct: 1120 KIHNDKLSIGVISHLEVIKERMPVKLIVTTAESGMGGSKVRIE 1162 >UniRef50_O67124 Probable DNA double-strand break repair rad50 ATPase n=1 Tax=Aquifex aeolicus RepID=RAD50_AQUAE Length = 978 Score = 344 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 197/1048 (18%), Positives = 427/1048 (40%), Gaps = 79/1048 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L +K K IDFT F F I G TGAGKT+++DAI ALY + PR Sbjct: 1 MRPLKLEVKGFTVYKKPQVIDFTPLKF-----FVIQGKTGAGKTSIIDAITYALYGKVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S + +++R E ++F ++G YR ++ Sbjct: 56 YG-ASVATKYVLSRGEKELKVALDFSLRGRNYRVERYYREF---------PEDSQVRVYE 105 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G+ L K + + ++GLDY FT+ +LL QG+F FL + ER ++L L G E Sbjct: 106 EGRRLNIKANEVEKWLFKISGLDYKTFTKVILLPQGEFDRFLK-ESSERKKILINLLGLE 164 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 ++ + E K+ + E L+ + + TP + + L +L+ L +E K+L ++ Sbjct: 165 ELEKVRQLASETFKNLEGKREALKKEYELLKDYTPTKKEVLEKTLKNLEEELKELKETEE 224 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +Q L +D L++E S+ L++ E++ + L ++ P +RI Sbjct: 225 KLRQELKKAEEKDSLERELSQVVTKLKELENLEKEVEKLREKLEFSRKVAPYVPIAKRIE 284 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 E L ++ + ++ L + + + AE ++ ++ + R ++ Sbjct: 285 EIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEEKEREKELEHRLKK 344 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + + + L++ +++ A+Q+ L+ T Sbjct: 345 LQE----IKEILKELSQLSSSLKEKEREYEQAKQEFEDLSERVEKGKKLVAETEEKLEKI 400 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + + L + ++ + E ++ +++ +L ++ Sbjct: 401 KELFSEEEYTSLKMKERLLVELQRKLKELKEKEGQLENLTQKYKEKKKVHEKVLNELKEL 460 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + ++ + L G CP+CG V+ + L++ + Sbjct: 461 ERELKERELHYHAHMVASYLSPGDTCPVCGGIYRGKALE------NVDAEGISELKHAKE 514 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +E + L +++ + E + LR + + L ++ Sbjct: 515 LKEKEEREIDTTLKLYAQKINSLKEEMEKLRNEVEELRKEIPE----------------- 557 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + ++ ++ L ++ +L+ ++ + + + Q+Q E+ Q L T L + Sbjct: 558 --NLKERIKKLEELRIEKEKLEHKLNKYRKALEDRQKQKEEAQAKLHKAQTELELLKEKI 615 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 E+ + ++ R+++L E+L + + + + E + Sbjct: 616 REKSRLVKEFKELY---------------RVERLEDYEESLKEEINYINSKLQEIEEKEK 660 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA----FLAALMDE 776 ++ + L S++ L+ + +S+ + + L+ + A + L Sbjct: 661 KLRKHFEELSSRKSKLEGELSALNESINSLEEERKEKLKELANIYEVAKSPREVVELYLG 720 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 +LE+ + E + + ++ E L +++ R + I+ E Sbjct: 721 DKEAELERKIKEFEESFQSLKLKKSEIEEKLKEYEGIR---------ELSDIKGEYESVK 771 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 +L E GE++++L+ + ++++ L ++I+++ +++E + +++ GD+F+ Sbjct: 772 TQLEEKHKKLGEVKRELEHLGERLKRKEELQKEISELEKKLEVYRVISNDF---RGDRFQ 828 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRY--LLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 K+ + L +V A++ + G Y L+R + VV R +LSGG Sbjct: 829 KYVSEIMLQKVVDRASEYFYKFTGNYFFELERATKGRDKDIVVVESSTSQRRPVSSLSGG 888 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGV 1013 E+FL SL+ A A+SDL+S ++SLF+DEGFG+LD + + + L+A+ + K IG+ Sbjct: 889 ETFLASLSFAFAVSDLLSGSANLESLFIDEGFGSLDQDMRERVSEILEAIKTNVNKMIGI 948 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +SH+ ER +I V+K ++ Sbjct: 949 VSHIPDFAERFTERIVVEKKGDYSEVRV 976 >UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9RXI5_GEOSY Length = 1114 Score = 343 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 227/1129 (20%), Positives = 449/1129 (39%), Gaps = 111/1129 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL + L+S + + IDFT G+F I GPTG+GK+T+LDA+ LAL+ R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFT--ALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV--ELAR 118 +N +Q+ ++ E FE++ A ++ R+ + D V + Sbjct: 59 AANRTQA---IINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEH 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 ++ +LADK+ + + L GL FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 RSEPVVLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG Q++ + ++ +AR E EK++A+ +G+ + ++ A ++ L + Sbjct: 176 LERYGDQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALEQAEADVRELAGLFAKRKK 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 ++ + + ++ QQE +Q L E + A+ A + P+WE Sbjct: 236 ELEEVEADVERTKQRWAWQQEKEAVEQELAALRQHESAIRELEVKKERAEQAERIWPYWE 295 Query: 298 R-------IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 + AE + +++EE + R A++ EL Q + L Sbjct: 296 QCEQACRLRAEAFRRYEGLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQ 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQ-QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 Q + E A + + ++ R++++ E+ + L Sbjct: 356 AAQLEQQMEVLGQELAALSEERKRLIAQEKAAARRFEEASVWYERGAKRQRELKEELKQH 415 Query: 410 EVATALAQHAEQR-PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL----- 463 E A AE+ +QH+ I +L Q + + +E+ +R Sbjct: 416 EEALDGKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGS 475 Query: 464 --------------------NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 + ++ + + + E+ + A +L+ G Sbjct: 476 RLQELFRRVERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLRPG 535 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITK----- 558 +PCP+CGS HP A S L A ++ + + + QL+ + + Sbjct: 536 EPCPVCGSREHPHPAAAPHDVQLERLSELEAERQRYEQDWQMIISFKAQLEQLAELAAGH 595 Query: 559 --------------------QLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP---- 594 +++ + L++ + QW ++ + Sbjct: 596 EAPPLFAESRSVEEVVDLTVEVRALAQDVIELKEAVYRVLAQWNEAESARREAEKACQWI 655 Query: 595 LDDIQPWLDAQDEHERQLRLLSQR--------------------HELQGQIAAHNQQIIQ 634 DI+ + E + R L Q+ E + +++ Sbjct: 656 AADIEALQVEKQRLEEERRQLEQQWRQMYPFLSLETIDAVYEQLCERENVRRDVQKRLED 715 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 +E++Q+ + + +S ++ +QQ+ +++++ E L Sbjct: 716 SVLFLEEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGSGPAAVHL 775 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 Q E E W++ + L S+ + +Q + ++A A++ Sbjct: 776 QKAEAEWRQLQN----GEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEALARW 831 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 AL ++F D + A ++ + ++ + Q QA+ + Q A + Sbjct: 832 RGALLDTMFADAEQVKQAKAEKAQRDEWDEAIRRYWRQIEQAEHRLAQLAAAIGG----- 886 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 E +Q+ A+ +++ T G + ++++ + L ++ +++ Sbjct: 887 ---AAVSAEQWETMQRVYAELKEQVEAMTQQLGAAQAKVEELKKKHSRFVELEEKQTELS 943 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALE 933 + +E + L +L+ G+ F +F L+ + +A+++L RL RY L+ + Sbjct: 944 RHIERYKQLQALL---RGNSFVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQGG-- 998 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEGFGTLDS 991 + D R TLSGGE+FL SL+LALALS + + + FLDEGFGTLD+ Sbjct: 999 FLIRDDANGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDA 1058 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 E L+T + AL+ L+ +GVISHV+ ++ R+P ++ V+ G Sbjct: 1059 ELLETVISALEKLHTERLAVGVISHVQEIRHRLPRRLIVEPAEPSGRGT 1107 >UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBT2_DICDC Length = 1227 Score = 341 bits (874), Expect = 9e-92, Method: Composition-based stats. Identities = 327/978 (33%), Positives = 479/978 (48%), Gaps = 109/978 (11%) Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-EQVQSLTASLQVLTDEEKQLIT 237 + Y + A +Q + L + Q Q + P E+++ L + E+ L Sbjct: 251 LQHYQEALATSVQQRSALDIALIQSQPQMDRLARSEPAEKLRPLYNERERCAREKSLLTR 310 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 +Q + +L + + + + Q+A AE + Q L + +++ Sbjct: 311 QITSVKQQIGQYQTALKLLKTQAEKTLSDQKAHAEHRQQQEDLVNERILPLDQHIATQQA 370 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ------QSLNTW 351 A+ L + ++ + + L + + + R A QQ + W Sbjct: 371 LRAQRQQTLDQLNERQKNLIASLDNLQRQQQATRLRLEDIDAYRQQNAIHQHWGSHIPLW 430 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE- 410 + + ++W + + + +QQ E+L Q +Q L+ +Q + A++ Sbjct: 431 QAQFPQQQKWQQDRQIQQEKANQQQVQAEYLEQQRQTLSEQQQAQSDAQERARQRLAEQQ 490 Query: 411 --------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + LA++ QR RQ L + + L+ Q+ Sbjct: 491 QHYEQQEAALPISDLQQQLARNVAQRHDRQQLATSAAVLQRLLSQRTLLETQRLGSRQQL 550 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 Q A R Y+ + + L D++ E E I +LE++R QLQ G+ CPLCGST HPA Sbjct: 551 EQLEDAQVRQRLDYQRQAEHLRDLEKRYELEQHIVSLESERQQLQLGKECPLCGSTHHPA 610 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 VE YQAL P Q RL L EV+ L Q++ + Q Q+ +N S++QD A Sbjct: 611 VERYQALRPSETQIRLQTLRQEVETLRATVVQTDTQINLLQHQRQQQQNALDSVQQDLSA 670 Query: 577 LTQQWQAVTASLNITL--QPLDDIQPWLDAQDEHERQLRL-------------------- 614 L QQ A++ L I Q L+ + WL + +E E+ L+ Sbjct: 671 LEQQCVALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQAHIADRERQSRQIQESKDLLT 730 Query: 615 ----------------LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 QR L + Q + + Q++++ Q + TL G+ L+ P Sbjct: 731 SASQLLQQTEQQLALNQQQRDALTLAQSELQQTLEKITQELQRLHQAISQTLEGFGLSAP 790 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELT-------------------------ALQNRIQQ 693 + +++ WL RQ E WQ+ ++E A++++ QQ Sbjct: 791 ELTQQDDWLRQRQLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREETNLAIKSQHQQ 850 Query: 694 LTPILETLPQSDE-----------------------LPHCEETVVLENWRQVHEQCLALH 730 L + +L Q+ + L E W+ L+ Sbjct: 851 LAELQRSLEQAQQQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQNSQSHISHLN 910 Query: 731 SQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLE 790 + +L+QQ A +L A QF AL+ + F D+ F AL+DE T QL LK+ L Sbjct: 911 GELGSLEQQHQRADDALNAATEQFGAALRETEFQDEADFRQALLDESTRHQLMMLKERLN 970 Query: 791 NQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIR 850 +++Q +++ Q TL H Q++P + ++ I Q LA L+ QGE+R Sbjct: 971 QRQQQVESVHQQAENTLDHHLQNKPA-SMPEGISHHDIHQLLAGLGDMLKNEVRHQGELR 1029 Query: 851 QQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHL 910 QQL D R +QQ L+ ++ + Q+ EDWG LN LIGS+ GDKFR+FAQGLTLD+LV+L Sbjct: 1030 QQLAGDQQLRDKQQALLNEVERSRQRSEDWGCLNQLIGSQRGDKFRRFAQGLTLDHLVYL 1089 Query: 911 ANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 AN+QL+RLHGRYLLQRKA++ LE++V DTWQADAVRDTRTLSGGESFLVSLALALALSDL Sbjct: 1090 ANRQLSRLHGRYLLQRKAADTLELQVADTWQADAVRDTRTLSGGESFLVSLALALALSDL 1149 Query: 971 VSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 VS+KTRIDSLFLDEGFGTLD ETLDTALD LD LNASGKTIGVISHVEAMKERI VQI+V Sbjct: 1150 VSNKTRIDSLFLDEGFGTLDEETLDTALDVLDNLNASGKTIGVISHVEAMKERIQVQIRV 1209 Query: 1031 KKINGLGYSKLESTFAVK 1048 +K NGLG S+L+S +AVK Sbjct: 1210 RKRNGLGISQLDSEYAVK 1227 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 269/902 (29%), Positives = 429/902 (47%), Gaps = 32/902 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDF R PF +N LFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFARAPFVNNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS SQN++MTR TAECLAEVEFEV+G AYRAFWSQ RA + P+GNLQ PRVELARCA Sbjct: 61 L-KVSPSQNEVMTRHTAECLAEVEFEVQGTAYRAFWSQRRAHDNPEGNLQPPRVELARCA 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKIL D+V DKL L A +TGLD+GRFT+SM+LSQGQFAAFLNA ERAELLEELTGT+ Sbjct: 120 DGKILTDRVNDKLALIADITGLDFGRFTKSMMLSQGQFAAFLNADANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFE+HK ++ LE LQAQ + + L++ EQ SL L VL +E L + Sbjct: 180 IYGQISEQVFEKHKQSQARLETLQAQVATIELMSDEQRTSLEQQLAVLQQQENDLALQRD 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + W + Q+ + Q ++QPQ+ L+ ++PA LRP + Sbjct: 240 EILAHQRWYEQLQHYQEALATSVQQRSALDIALIQSQPQMDRLARSEPAEKLRPLYNERE 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFR 359 + + + +QI V ++ ++ A K ++ + + +R Sbjct: 300 RCAREKSLLTRQITSVKQQIGQYQTALKLLKTQAEKTLSDQKAHAEHRQQQEDLVNERIL 359 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + A +A +Q+ + L + Q+ L + +L + A + Sbjct: 360 PLDQHIATQQALRAQRQQTLDQLNERQKNL------IASLDNLQRQQQATRLRLEDIDAY 413 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 Q+ H + Q Q + + QE+ + E ++ ++ + Sbjct: 414 RQQNAIHQHWGSHIPLWQAQFPQQQKWQQDRQIQQEKANQQQVQAEYLEQQRQTLSEQQQ 473 Query: 480 VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEV 539 ++ ++ AR + E Q+ Q P+ S + + + ++ +L + Sbjct: 474 AQSDAQERARQRLAEQQQHYEQQEAALPI----SDLQQQLARNVAQRHDRQQLATSAAVL 529 Query: 540 KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ 599 ++L + L Q +QL++ E+ R D Q + + + + + Sbjct: 530 QRLLSQRTLLETQRLGSRQQLEQLEDAQVRQRLDYQRQAEHLRDLEKRYELEQHIVSLES 589 Query: 600 PWLDAQDEHERQLRLLSQRHELQGQIA----AHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 Q E L + ++ A ++ +Q++E + ++ T T L Sbjct: 590 ERQQLQLGKECPLCGSTHHPAVERYQALRPSETQIRLQTLRQEVETLRATVVQTDTQINL 649 Query: 656 TLPQEDEEESWLATRQQEAQSWQQRQNELTAL------QNRIQQLTPILETLPQSDELPH 709 Q ++++ L + QQ+ + +Q+ L+ ++++LT L + + ++ Sbjct: 650 LQHQRQQQQNALDSVQQDLSALEQQCVALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQ 709 Query: 710 CEETVVLENWRQVHEQCLALHS------QQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 RQ+ E L S Q + + +L AQ++ L+ Sbjct: 710 AHIADRERQSRQIQESKDLLTSASQLLQQTEQQLALNQQQRDALTLAQSELQQTLEKITQ 769 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + Q+ A + ++ RQ Q + E +H Q +P A++ Sbjct: 770 ELQRLHQAISQTLEGFGLSAPELTQQDDWLRQRQLEWLRWQENEHEHHQKQP-YLSAVSA 828 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ---QQTLMQQIAQMTQQVEDW 880 +E Q++ +T+ ++ E+++ L+Q R Q + + + + ++ Q+ + Sbjct: 829 DIESSQRQREETNLAIKSQHQQLAELQRSLEQAQQQRWQWFGNKVVNETLTELRQRSQLL 888 Query: 881 GY 882 Sbjct: 889 ER 890 >UniRef50_B7GM49 ATPase involved in DNA repair, SbcC n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM49_ANOFW Length = 1119 Score = 341 bits (874), Expect = 9e-92, Method: Composition-based stats. Identities = 245/1135 (21%), Positives = 449/1135 (39%), Gaps = 118/1135 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + L+S + + IDF E GLF I GPTG+GK+++LDA+ LALY R Sbjct: 1 MKPIRLTIAGLHSFRQKETIDF--EKLCEGGLFGIFGPTGSGKSSILDAMTLALYGNVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG--NLQVPRVELAR 118 SN + N +M E FE++ + ++ RA + D V + Sbjct: 59 ASNQT---NGIMNHAENELFVSFTFELQNASGAKRYTVERAFKRADALRIRSVVSRLIEE 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + ++ADK + E L GL+ FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 GTERVVIADKTRLVDEQVKQLLGLEMKDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFH 175 Query: 179 TEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG ++ + + A +LE ++ + +G+ + EQV+ +L +E ++ Sbjct: 176 LERYGDELNKKLKHKLAEASAKLEAIKGEQAGLGDASKEQVEKQKQALAEKKEELERAKN 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + + + + Q E + + L + +EE+ + ++ A L P+ E Sbjct: 236 KLRHIHEQYEKEKQLWQWQCEKEKVEHELNKWREQEEQMKQLAQTYERSKEAERLVPYME 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 ++ + + ++ E+ ++LQ +R + ++ + LQ+ ++ Sbjct: 296 QVERSAQEVVSWNKKASELTSQLQQ---VRMMYEQANKQYEQCRAKKNEEEPKALQKQEQ 352 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 +Q A R+ QQ R LR+ +QQ A Q + T +A + L + Sbjct: 353 LKQALQTLALMRSLEQQQAKLRASLREIEQQEQQALQMVETCTKEYTTWSAKQAE--LKK 410 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 E++ + H+ Q +KR+ Q ++ + +E+ + ++Q Y E +Q+ Sbjct: 411 QWEEKKVDVHVKERLEQAYEIKKRIQLQQQQLEELEREKENKQKVYETLKQTYDEVMKQM 470 Query: 478 ADVK---------------TICEQEARIKTL--------------------EAQRAQLQA 502 + + +CE+E ++ L +L+ Sbjct: 471 KESEARFVATFRYVESLYHRVCEREKQVAVLIYQKKEEKKQMEAARLHDLAATLAERLRD 530 Query: 503 GQPCPLCGSTSHPAVE---------------------------AYQALEPGVNQSRLLAL 535 G+ CP+CGST HP A Q ++ V Q L Sbjct: 531 GEACPVCGSTHHPNRAKGKEMASDEEAMERMEHSIQHGEQLMVAMQQMKMQVEQLAELMA 590 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 + + + R + LQ E E ++L QD ++ + + Q Sbjct: 591 RQPLPQHVDVEKVKREVEETPLCSLQEAEVEQKALYQDYVECRERVRHYMEQWDEQKQKQ 650 Query: 596 DDIQPWLDAQDEHERQLRL--LSQRHELQGQIAAHNQ------------------QIIQY 635 ++ + R+ L +R ++ + ++ + + Sbjct: 651 QQYAYQMETIGQQIREWEEKCLEKRARVEEEKKMWHKTFSDVSFEQVDAMLSDLRERERE 710 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS-----WQQRQNELTALQNR 690 QQ++QR + + L L + E + ++ + + QQ + L Sbjct: 711 AQQLQQRIEKSVIVLDDKRAELERWKETYQDMTKQKAQCMTEWNMYKQQYEQYKRTLPEE 770 Query: 691 I--QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 I +++ + + QS + EE W + +Q L + +Q A + + Sbjct: 771 IDEERVQQQIVFMEQSLQRMKREEEEAYARWMNLQQQLQTLQADKQAAHVALQEAEKRKK 830 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 +A LQ S F A+ +DEQT Q+ Q Q + + Q + E + Sbjct: 831 EAAYALAEQLQTSSFTAVDDVRASRLDEQTKQQIAQRIQQYNDVLTKLQNEWQRLHEAMN 890 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + E+ Q Q++ E+ G + + + L Q Sbjct: 891 G--------AVMTKQQWEETMYAYEQVKQQVDEHMRQLGSLEAIVADLETKHARFVQLQQ 942 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRK 927 + Q+ + V + L ++ G+ F +F L ++ A+++L L RY ++ Sbjct: 943 ERMQLEKVVGQYEELQKVL---RGNSFVEFIAEEQLVHVTRYASERLGELTRQRYAIELD 999 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEG 985 + + D R TLSGGE+FL SL+LALALS + + + FLDEG Sbjct: 1000 SEGG--FVIRDDANGGVRRPVTTLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEG 1057 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FGTLD E LD + AL+ L A IGVISHV+ + R+P ++ VK G Sbjct: 1058 FGTLDQELLDVVMSALERLRADNMAIGVISHVQELHARMPKRLIVKPAEPSGKGT 1112 >UniRef50_B6FJZ8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJZ8_9CLOT Length = 1026 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 223/1066 (20%), Positives = 441/1066 (41%), Gaps = 60/1066 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++K LNS E IDF E G F I GPTG+GK+T+LD + LALY Sbjct: 1 MRPIKLKIKGLNSFVEEQTIDF--EKLTKQGFFGIFGPTGSGKSTILDGMILALYG---- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +S+ N+ + ++ EF++ + + R + + + L Sbjct: 55 MKAMSRGTNEFVNKNCKSAQVSYEFQITSAQVKRYR-VEREFKAGEKGTKSGKCRLLDVT 113 Query: 121 DGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 DG+ +L + V + GL F R+++L QG+F+ FL K+R E+LE L Sbjct: 114 DGETVLEESVTGVDRACVEIIGLTADDFMRTVVLPQGKFSEFLKVSGKDRREILERLFRL 173 Query: 180 EIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E YG ++ + K ++E +L QA + E+++ E + L A Sbjct: 174 EEYGVRLEERIASAIKKEQSEHTRLCGQAEVYGDCSEEELRDARERKDNYQTEIELLEKA 233 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 ++ ++ LQ+E +Q + +E+ + + +L+L+ A ++ P Sbjct: 234 LRERRKEAEIYKEIWNLQEEQQLLKQKEKMLFEKEQIIEEKKRSLTLSDKAGHVMPILRS 293 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ-------QSLNTW 351 + E + Q++E+ R + + H +K E + ++ + Sbjct: 294 VTELEDKETELLQKLEQETARYEKRKEDVKVRKKHFSKLETEKESKESGLLSSIERAKEA 353 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQW-QQQLTHAEQKLNALAAITLTLTADE 410 L+++ Q E A +++ + + L++ Q+ E + L L+ Sbjct: 354 LKDYRELPQLQKEQNCSEALWNESRTQEQSLKEKVQKTQLKKESQTEELRKTEEMLSRRM 413 Query: 411 VATALAQHAEQRPLR-QHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 + + + EQ LR L + + ++++ Q +V +Q QE + + ++ Sbjct: 414 ITSEYREALEQFTLRYNELTGILRERKEKEQKTDQKKVQLQVQKQEIVALKEKMTVLEKQ 473 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS---HPAVEAYQALEPG 526 + ++ A+ EQ + R +L+ G+PCP+CGS + + Sbjct: 474 LELWKEEEAEFNKDMEQTQILN----LRKKLKRGEPCPVCGSRHFVYEENDGGEEKGQES 529 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 V+ +L L +++ + L + E + L + A+ ++ + Sbjct: 530 VDLEKLETLRKQIENRESVYKAAEQEYQVKQSLLLAAQEEYKELEEKTAAIAKEMEEKKD 589 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ-GQIAAHNQQIIQYQQQ-IEQRQQ 644 SL L L L A+ E R L +R E++ +I ++ Q + E+ + Sbjct: 590 SLQEEL--LAYGIQSLKAERERVRNLDQERERLEIERNRIYRQQTEVEQILGRAQEEWKN 647 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 T L +P +++ + + + + L L++ + L I + + Sbjct: 648 KEQQTRQLEILLIPLKEKVTQKQEQIRAKIGTETNPEVYLQTLEDSLSNLRKIYQEAKRK 707 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 E E W Q LQ ++L+ A+ + L+ F Sbjct: 708 KEEAENLLKQSEEVW--------------QILQGTKTGNEEALKNARTYLEEELKQQGFL 753 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 +++ AL+ ++ + + + Q +Q Q + + LA + + V Sbjct: 754 NREEVRKALLSKECQERYREEIEEYVRQLQQTQAQIENVEKRLAGRKIEK--------VI 805 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 E+ ++ RE RQ++K+ ++ +QQ + + I+++ + L Sbjct: 806 YEEAVTNCEMLDREKREKEEILIATRQEIKRMEEHLKQQSEIRKVISEIEHR---LAILE 862 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQAD 943 L G +F +F L + A+++L + +G Y L+ +E E + D Sbjct: 863 DLRSVTRGKRFVEFLATERLRYISKSASKRLYEITNGNYELE--INEDGEFIIRDNKNGG 920 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 R T TLSGGE+F+ SLALALALS + ++ FLDEGFG+LD LD +++L Sbjct: 921 VRRQTATLSGGETFVTSLALALALSAEIQLKGTAPLELFFLDEGFGSLDDMLLDIVMESL 980 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLESTFA 1046 + ++ +G+ISHVE++K R+P+++ V G+ S++ ++ Sbjct: 981 EKIHNDHLKVGIISHVESVKARVPIRLMVTPAETGVSGSRVNIEYS 1026 >UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JT07_AGRVS Length = 1024 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 229/1072 (21%), Positives = 410/1072 (38%), Gaps = 89/1072 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ G IDF + GLF I G TG+GK+T+ A+ AL+ E R Sbjct: 1 MRPVRLVMQAFGPYAGRQSIDFREA--VAAGLFGIYGQTGSGKSTIFSAMTFALFGEAAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV--------- 111 + S E F++ Y + R + G + Sbjct: 59 AEQDTISLRSDHASPDLATEVEFVFDLGARRYVIRRRPEQMRPKQRGGGETRDAHEAWLF 118 Query: 112 -----PRVELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 E+ GK+LA+K + E L G +F + +LL QG+F AFL AK Sbjct: 119 DATGLGESEITAAQPGKVLAEKKIGLVREKITDLLGYGPEQFKQIVLLPQGRFEAFLAAK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ-ASGVTLLTPEQVQSLTAS 224 +ER ++L L +Y +++A + +SA + + +A + + +Q+L Sbjct: 179 TQERQDILSALFDVSLYRRLAAKLKSDAESAERLVREERAVCLRRLGADGFDSMQALMDG 238 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 + A+Q + + + ++ + +++ A ++K Q ++ Sbjct: 239 IAEAASSLTDRQQAEQHLRAEADAARASLQAARDTDNQFKSMDAARQAKQKTLDQATDMA 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 Q +A+ + +++ ++ L M ++ S + A + A QQ Sbjct: 299 ALQAQVTSAERARTLADAENRVIEAQRECKDAEAALSLAMQIQTSTQATAQQAQAAYLQQ 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT- 403 QS + Q + S R+ Q++ LA +T Sbjct: 359 IQSKSEIEALRRTIDQMERDRDVLEKATGLTASVEAAKRRVQEEQAAFRTAEAGLAELTG 418 Query: 404 -LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + + A H ++ L +L AL Q V Q + + + + +Q Q+ +A Sbjct: 419 KRQVREQALKQARLAHERRQSLTANLTALQAQ-VKQAEIVERAEKDLQQAYQQLNH-SAN 476 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 ++ RQ K L D A+ L A+L G PCP+CG+T HP + Sbjct: 477 IHAERQAQTTKAAALFDQAERRLASAQALHLA---AKLGPGLPCPVCGATDHPTPAMGDS 533 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 E G++++ A + K EE + Q +E Q D + QQ Q Sbjct: 534 AEAGLDKAFREAKQALEKARLEEQHSA-----TAHASAQATVDERQGRLGDLERPEQQIQ 588 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + + + L + P +D L + Q ++ H ++ + + Sbjct: 589 ELRQDMEGMERALRGLGPAIDIAAAETALENLGKAITDAQARLDQHRDRLAALKTETSNG 648 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L L+G A L + AL+ ++QQ ++ + Sbjct: 649 ETRLAEMLSGIAAHL------------------------RDKAALERQLQQSKALMTSRE 684 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + + T E H+ A A L + QA+F+ + Sbjct: 685 TALKRSEEAATATREAAFSAHKDSEA--------------AENILTERQARFEK--ENQG 728 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F+D+ A + L +L+ LE + +T Q + + Sbjct: 729 FEDR--LRDAGLTRDDLNRLKPAIMTLERDKATIETHQRQLQRDSEKLLELETALTGKQP 786 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + Q+ LA T + +L + R++ + +++ + Sbjct: 787 PDLLAHQEALASAEAAFDTAVTLRAATAARLDHLQNLRKELAGIAKRLDEAEATSGPLRE 846 Query: 883 LNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR------KASEALE 933 L L ++ K FA G + ++ AN +L + +GRY L+R + L Sbjct: 847 LAGLFDAQNRQKLKLETFAIGAMFEQVLQAANLRLGPMTNGRYRLERDIESGGRGKRGLG 906 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 + D A R T TLSGGE+F+ +LALAL L+D+V S K R+D++FLDEGFG+LD Sbjct: 907 ILAFDVHTGKA-RPTATLSGGETFIAALALALGLADVVESASGKVRLDTIFLDEGFGSLD 965 Query: 991 SE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 +E TLD L AL++L + +T+G+ISHV ++E IP V+K + + Sbjct: 966 TENGSGTLDLVLQALNSLASQNRTVGLISHVPLVQEAIPNGFYVRKDSDGSH 1017 >UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales RepID=B2GFI4_KOCRD Length = 1079 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 223/1083 (20%), Positives = 389/1083 (35%), Gaps = 50/1083 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ + + G+ +DF E G+F + G TG+GKT++LDAIC ALY P Sbjct: 1 MRLHRMEITAFGPFAGQEVVDF--EGLNRAGVFLLNGETGSGKTSVLDAICFALYGTGPT 58 Query: 61 LSNVSQSQNDLMTRDTAEC--LAEVEFEVKGEAYRA----FWSQNRARNQPDGNLQVPRV 114 + + +VEF G + W + +R + V Sbjct: 59 TAAKGGRKAQHSDHADPHTGPRVDVEFSAGGRRWHVSRTPAWREPSSRAASGWTERHATV 118 Query: 115 ELARCADGKILAD--KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 L +G+ + + D + GLD +FT+ M+L QG+FA FL A KER EL Sbjct: 119 LLRESVEGQWMERGYRPDDVGQQIHHAIGLDREQFTQVMMLPQGRFARFLQAGSKEREEL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 LE L GT++Y I + + A+ +L A+A T E ++ A L +E Sbjct: 179 LETLFGTDVYAGIQDELKARADHAKQQLRDAGAEAQR----TEELLERFRARLLAAVEEL 234 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQE-ASRRQQALQQALAEEEKAQPQLAALSLAQPARN 291 + + +W R+ + + S E A + AR+ Sbjct: 235 PARAQDEVEGTPVASWAPREQAVDETGPSDGPAQWTDPTGETPSATGNEDDGRGPEDARD 294 Query: 292 LRPHWERIA----EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA---------KQS 338 + W +A A+ RQ+ E T Q A + R ++ Sbjct: 295 VTARWADLAGAGGALVDAVDRARQRAAEEFTVAQRRAAGLEAARERLDHFDSLTRRREKL 354 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 +E ++ Q LQEHD Q + R ++T + + + +L + Sbjct: 355 SEEHERAQDAARTLQEHDAAHQLQDVVQASRTATREETEAAQRVSDLRTELAPQSPPGRS 414 Query: 399 LAAITLTLTA--DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + DE A A A R + V + L + + ++ T+ Sbjct: 415 GRQVLAEHAPLLDEQLAARAFSASLRDAAVAAREAARRAVERAGALERDRADMERETRHL 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 Q A ++R+R + + LA+ + EQ EA + + S + Sbjct: 475 QQLEGAEQQLRERMEGERVALAEREHDLEQLRSDTRDEALVRERARSARAAVEASRDYEH 534 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 A + G + R E + E LR + L + Sbjct: 535 -ARATAEQRGRDYERDETARREAARHVEGLEALR--FEHAASALAEELAPGAPCPVCGST 591 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + +T+ L+ + DA + QR + A Sbjct: 592 CHPEPATAAPGDEVTVADLERARAARDAAQDTADASHATWQRAQHAAAEALGRGAEEDLD 651 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 +E+ ++ A E + + R+ A+ ++ + + ++ Sbjct: 652 AVVERARRAAEEETELVARLERAERIARAVASGRETLAEVEERAASTSAEAASARIRVDA 711 Query: 697 ILETLPQSDELPHCEETVVLENWRQVH--EQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + + E + R + EQ L ++ + A + + + Sbjct: 712 AAQHCDREREQLAQSLRGFRDAPRFLEHAEQLLEHLDAWESAHRAHEQAREHARLSTHAL 771 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV--TQTAETLAQHQQ 812 + A+ AS FD AL++ +L + E + + A Sbjct: 772 ERAVSASPFDGAADVSRALLEPGEARELRTWWEAHERDAAALDAELATEEMRRAAALDGP 831 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 R + A + +L +L + + + A Q + I + Sbjct: 832 EREELSDAALSRAALARDDLDMLRDRLTRQLGGLHALVEDITATASQIPDQDARHRGIRE 891 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR--- 926 + + + S+ + F L+ + +A++ L+R+ GR+ L Sbjct: 892 RAATLGGLADVATATSSENSLRMTLTSFVLAAKLEQVAAVASEHLSRMSSGRFTLVHTDQ 951 Query: 927 ---KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSL 980 L +E+ D+W R T TLSGGESF SLALALAL+D+V + ID+L Sbjct: 952 TRGGGKSGLGLEIDDSWTG-VRRGTETLSGGESFFTSLALALALADVVRAEAGGRDIDTL 1010 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 F+DEGFG+LD +TL+ L+ LD L G+ IGV+SHV MK+RI Q+ V K + Sbjct: 1011 FVDEGFGSLDEQTLEQVLETLDGLRRDGRVIGVVSHVSEMKQRIDTQLVVTKTPQGSHLG 1070 Query: 1041 LES 1043 +E+ Sbjct: 1071 IEA 1073 >UniRef50_A7Z370 YirY n=2 Tax=Bacillus subtilis group RepID=A7Z370_BACA2 Length = 1130 Score = 339 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 220/1145 (19%), Positives = 443/1145 (38%), Gaps = 127/1145 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L +K L+S + E IDF + G+F I GPTG+GK+++LDA+ LALY + R Sbjct: 1 MKPILLTIKGLHSFREEQTIDFAG--LSGAGVFGIFGPTGSGKSSILDAMTLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +N + ++ + F ++ ++ + + + ++ L Sbjct: 59 AANNTHG---ILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIK 115 Query: 121 DGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D + +LADK + + L GL FTR+++L QG+FA FL+ K ER +L+ L Sbjct: 116 DEQTVLADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNL 175 Query: 180 EIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E YG ++ + + + A + ++ A+ SG+ + ++ + ++ Sbjct: 176 EQYGDRLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKQAEQQFHEANERLEEAEKK 235 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + + ++ LQ E ++ ++ L A+ A L P+ +R Sbjct: 236 RVRAKERFENHQEIWNLQTERDEYERREKKLEERHPYITDLTERLKEAETALALEPYADR 295 Query: 299 IAEHSAALAHIRQQIEEVNTRLQ-------STMALRASIRHHAAKQSAELQQQQQSLNTW 351 E H ++ E + + + R H A+Q +L ++++ Sbjct: 296 YTEAVRRKQHAEREHELAKRKSEAETVSFTRQNEAYEAWRAHKAEQEPKLVKEEELYQRL 355 Query: 352 LQEHDRFRQWNNE-----------PAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + + E + A Q ++ L + Q + +++L A+ Sbjct: 356 SAIEQKLLEAKKEAEKTNAEHSKKEEEYEAASKQLAGVKDRLTRGQNRQNELKEELKAVQ 415 Query: 401 AITLTLTADEVATALAQ--HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 + A LA Q + + L Q+ +K + + E+ Sbjct: 416 VTADERKKCQTAAQLAAGFQQTQEQITKERANLTTQLKNVEKLNGESESLTAKAKTEEED 475 Query: 459 RNAALNEMRQRY--------------KEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 A ++ Y + + AD++ E+ + +L G+ Sbjct: 476 ITHAYQTLQTVYHMVCETERSLKAAAERADKTQADLRRRSEEARTAALTKELSEKLIEGK 535 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 PCP+CGST H + A E + + +V+ L E A L + +T ++ +E Sbjct: 536 PCPVCGSTQHDRPRS--AHETFSPDTAVQEQLQQVEALLSEAAALSQ--EVLTAKVALEE 591 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 + + + + + A+ +I+ +PLD+ + + + +Q +LS + ++ Sbjct: 592 QSGRFTEECPFLQSVRVPELEAASSISGRPLDEAFSAVRLEWKQMKQ-DMLSVKEKVTRL 650 Query: 625 IAAHNQQIIQYQQ-------------------------------------------QIEQ 641 I+AH Q + Q +Q QI+ Sbjct: 651 ISAHQQTVKQAEQLAERIRYEEKEAGRLRHSLEELESLSESRLNQYNEVCGDIPPNQIDA 710 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN-------ELTALQNRIQQL 694 Q + + + ++L ++E + Q+ ++ EL R+QQ+ Sbjct: 711 WQASIDEKDRQAEECEKRIETSIAFLKEHEEEKERLQEMKHRLERERLELHYASERLQQV 770 Query: 695 -----------------TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQ 737 + LE + Q +L +E + + +Q + ++ Sbjct: 771 IDGYEQELGTAAEETSISAKLEAVRQELQLLKSKEQSLFDALKQAQQSLNDAKGRESGSL 830 Query: 738 QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 A SL+KAQ + + + F + +L+ + ++++ + +Q Sbjct: 831 MSLRDAETSLEKAQNDWRVRSKNTGFTEPDQVKKSLLPQGRAEEMKKEIDEFLDTSKQLS 890 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 +++ + LA+ + ++ E+ ++ Q E+ + E Q K A Sbjct: 891 ANISRVTDKLAERR-----------ISEEEWTASVSLLKQAEAESGAAMEEKGAQAKAFA 939 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 ++Q + + A++ L+ L +G+ F ++ L+++ A+ +L Sbjct: 940 VMQKQHKRFKEIEAELKSWQTQIDRLDKLQSVCKGNTFVEYLAEEQLESVARDASARLGA 999 Query: 918 LHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR- 976 L + SE + D R +LSGGE+FL SL+LALALS + + + Sbjct: 1000 LTRQRYAILVDSEG-GFVMRDDANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQY 1058 Query: 977 -IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 + FLDEGFGTLD LDT + AL+ L + ++GVISHV+ ++ R+P ++ V Sbjct: 1059 PLQFFFLDEGFGTLDQGLLDTVVTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEP 1118 Query: 1036 LGYSK 1040 G Sbjct: 1119 GGKGT 1123 >UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH6_FUSMR Length = 1016 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 201/1047 (19%), Positives = 449/1047 (42%), Gaps = 57/1047 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ L S K + I+F E NGLF I G TG+GK+T+LDA+ +LY + PR Sbjct: 1 MRPLLLEIEGLQSYKEKQVINF--EKLCENGLFGIFGETGSGKSTILDAMIFSLYGKIPR 58 Query: 61 ---LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 L S+S + + + + +F + + Y S+ A + G + E Sbjct: 59 TAELDQDSKSLKNFLNTSSKKMEVYFKFALDEDIYEV--SRKYALGKSKGEEVLKEKETI 116 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +G+I+AD +K ++ A GL FTR+++L QG+F+ F+ K ++ E+LE++ Sbjct: 117 LRKNGEIVADSIKKLEKIIAEDFGLSDDDFTRTVVLPQGKFSEFVKLKGADKREMLEKIF 176 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E YG+ + + ++ + + E+L+ + + + +T E+++ L + +E ++ Sbjct: 177 TMEKYGKALQDKMKKEMDFWKKKDEELEEELAELVDITAEKIEELEKEKSNIVEEIERKT 236 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 ++ ++ L E ++ + + + + E+E + A L+ + A +R + Sbjct: 237 KEHKEIEKRYYELKNLKEEIEKYNEQLERKSRLELEKESIEYIRAQLTKGRNANEIREYI 296 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 E++ + Q+ E+ T+ + Q E+ +++ + + Sbjct: 297 EKLEISQGEKRKVENQLRELETQEVQYQEGIKKLEEDTKVQKEEIYKKELEKSQIYFDKS 356 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 NE G++ E ++ +++ QK + L +E+ Sbjct: 357 E-EDTLNEVIGYKGNLEYVEKGLERAKRNLEEI----QKEIGVHTQDLANNTNELEEKER 411 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 + A + + ++ + + + +R+ + ++ +E R L ++ KE+ ++ Sbjct: 412 ELANLPEVSRENLSNYRDEIEEYQRVIRDYREKKSQKEEYLLRLEELERKLEQLKEEERE 471 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 + I E+E R +L+ G+PCP+CGS H +E Sbjct: 472 IDSQLEILEEERRENLAYELAKELKEGEPCPVCGSIHHNKIEH--------------NSS 517 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 +++K+ + + + + + SL++ + L ++ + + + Sbjct: 518 EDIEKIQRDLKKASEKKSSNIADIGKVSGSILSLKESIERLEVIYKERVVDESYYQEIIS 577 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQG----QIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 D ++ E ER+L L++ E Q+ + + ++ E R Q L + Sbjct: 578 DKDRVIEEYREEERKLDTLAKERERVNSIVIQLKEKCKNTQKNIEKSESRLQEYLAEIDE 637 Query: 653 YALTLPQEDEEESWLATR--QQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHC 710 +++ ++ + L + + ++R++EL A +I++ + ++ + Sbjct: 638 HSIRKASLEKSIARLGESFVDKRKEELEKRRDELKANYQKIRKYEEEIASINRIIAKNDS 697 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFL 770 + + + ++ + ++ ++ Q +++++ +++ F + Sbjct: 698 QIVEIKDRLEKIRLGINSYQVKRDSVNSQIEELNKTIEELISKYH-------FMTVEEVR 750 Query: 771 AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ 830 + + + Q ++ E ++ L+ E+ Q + + ++ E++ Q Sbjct: 751 DSYISGLEEREYSQKIESYEESWKEVNVLLRDL-ESRVQGKDFSIELWEEISQLKERLNQ 809 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSK 890 E+ T+Q++ + ++ + QL + R++Q+ + ++ A L Sbjct: 810 EILDTYQRIEQISSDIALQKTQLADSKEKRKEQKEIRRKRAMAE----------DLYKKF 859 Query: 891 EGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTR 949 F F L ++ A+ +TR+ +GRY L + V+D + R Sbjct: 860 SKGGFVNFLTTKKLKGVIENASHYITRITNGRYKL--YTDDECNFYVIDMFNDGIKRKVG 917 Query: 950 TLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDAL-NA 1006 TLSGGE F+VSL LALALS + K ++ FLDEGFG+LDS+ LD ++A++ + Sbjct: 918 TLSGGEIFVVSLCLALALSKQLQLKGKIPLEFFFLDEGFGSLDSKLLDKVMEAIENIRRE 977 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKI 1033 IG+I+H+E +K RI +++V+K Sbjct: 978 ENIKIGIITHLEDLKVRIDRKLQVEKA 1004 >UniRef50_C7RGF7 SMC domain protein n=2 Tax=Anaerococcus RepID=C7RGF7_ANAPD Length = 1011 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 203/1077 (18%), Positives = 433/1077 (40%), Gaps = 100/1077 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L+++ + K E IDFT +F I+G TG+GKT++ DAI ALY + R Sbjct: 1 MRPRRLKMRGFITYKEEIDIDFT--TLFEKKIFLISGATGSGKTSIFDAINFALYGKVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPD-GNLQVPRVELARC 119 + + + D ++ + ++FEV YR + + G V L Sbjct: 59 DISADRLRCDFLSEEDPYTYVSLDFEVGERTYRIERIPRQVAKKTKIGQNIGNAVSLYDI 118 Query: 120 ADG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG +L++K + E+ + GLD +F++ MLL+QG+F FL+AK ++A+LL ++ Sbjct: 119 TDGVTLLSEKKTETDEMIKNIIGLDDKQFSKVMLLAQGKFQEFLSAKSTDKAKLLGDIFK 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T Y + E K + ++E + + L E++ L ++T + ++ Sbjct: 179 TYEYKNFQDKIKEMAKDSIQKMEYIDNDLENI-LSYNEEISGLIDRDSIITHDFPEMEKV 237 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN-LRPHWE 297 ++ + + D L++ +A++ L + +KA+ + Q LR E Sbjct: 238 IEERKLVYE--NKSDLLKESEQNIDKAIKSDLRDLQKAELDNTNIEKYQEIEKKLRAERE 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + +E+ IR+ N + K + E+ ++ + T L+ + Sbjct: 296 KESEYKKLRDLIRKSELANNISIFEKNYQGTLTDIDKNKSNLEILKKDE--KTALKTKEE 353 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA-DEVATALA 416 R + A R + + E + L ++ A +I D+ + Sbjct: 354 VRGKYEKLAEDRLKLDKLKRKAEEIENTILSLEKFKEAEIAYKSIEERTKLLDQTQKEIE 413 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVA-IQNVTQEQTQRNAALNEMRQ------- 468 + + L L+ +++ + + + + N+ + + L +R+ Sbjct: 414 SLEKDLAKERELFDLNNELLGEITEKGRSESKNLSNLMENIRKEEEDLKMLREIKSYEES 473 Query: 469 --RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 ++ +L + ++ + + + CP+CGS A+ + + Sbjct: 474 LLSLTKEKDKLESSELKAKENEDLLIINKLIDRTNEEGICPVCGSKHDEAIGKHPIEDYD 533 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 ++ R K L ++ + D + +++++ +++ + E+ LT+ ++ Sbjct: 534 LDNLR--------KSLISSKEAIKLRQDQVE-KIRKEIVSDKNINELEKILTENYKR--- 581 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIA-AHNQQIIQYQQQIEQRQQL 645 +DE E+ + L + ++ + Q +++ + +E +++ Sbjct: 582 ------------------KDEIEKNIEALRENYKKKSQDKIDFKKKLDKIYHDLEVKKKK 623 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L +D +E +A Q+ + + + L + L + Sbjct: 624 ED------GLKRDAQDNKEIEIAYLSQKDKMKDLSK----------ESLVDEKKILEKEI 667 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + T V ++ + + ++ + +++ K + +FD L+ + FD+ Sbjct: 668 LDLDKDITEVNRKYQNAELKIKEIQTKIENIKENIKDLDLRRDKYKEEFDKKLEEN-FDN 726 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 ++ AL + + L K+ +E + L+ +++ + Sbjct: 727 IASYKEAL---ENYSGLAGKKEGMEEFFNNLEKLMIS--------EENFASYKDMEVRDL 775 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 ++++ ++ + + EI +L + + + L + ++ E L+ Sbjct: 776 DKLRGKIKSKEDERDIIRNQKSEIHTRLDNFSKVIARLKLLRKDYEMNMKENESLARLSK 835 Query: 886 LIGSKEGD-------KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASE 930 + G F F D ++ LAN +L + ++ + R ++ Sbjct: 836 VADGSFGKVKGREKIDFETFVLTYYFDKVLKLANMRLLAMTDNQFSMVRKSDTTDQRSKT 895 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFG 987 L++E++D +R TLSGGESFL SL+LAL LSD +S RID+LF+DEGFG Sbjct: 896 GLDIEILDA-NTGKMRPVSTLSGGESFLASLSLALGLSDEISMENGGVRIDTLFIDEGFG 954 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 +L + L+ A+ A++ L K IG+ISHV+ +KE I +I V G SK+E Sbjct: 955 SLSKDYLENAVSAIEKLAYEDKFIGLISHVDELKEAIDAKILVFYEPSEG-SKVEVE 1010 >UniRef50_Q0S485 ATP-dependent dsDNA exonuclease SbcC n=4 Tax=Rhodococcus RepID=Q0S485_RHOSR Length = 993 Score = 338 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 208/1081 (19%), Positives = 383/1081 (35%), Gaps = 129/1081 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L ++ G ++DF R ++GLF + G TGAGKTT+LDA+ ALY P Sbjct: 1 MRLHRLEVEAFGPFAGSVEVDFDR--LGADGLFLLHGHTGAGKTTILDAVAFALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELA 117 + + +E + G R S R + G+ + + L Sbjct: 59 ARKDGKRLLSDHAPAGSVPTVTLEATIAGRHLRLVRSPEFERPKRRGSGTIKENAKATLT 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ D + L G+ +F + +LL QG+FA FL A +ER +LLE L Sbjct: 119 WLDGRGENLSRIPDIADEVGRLMGMSADQFFQVVLLPQGEFAKFLRADNEERGQLLERLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV------------------Q 219 T +G + ++ +++ +L++ Q + Sbjct: 179 DTTRFGTVEEWFLDRRRTSAHDLDEHQRAVDVLLARVATAAGIEGGADADPVTWAHKLEA 238 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 + + D+ + + + + +L R ELQ R + L+ A ++ Sbjct: 239 EARETRDLAADDLQTAKSQAKVTRDALTEARRVLELQNRRRRAEAELEAHAAGADRRAVL 298 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 +A L+ A+ A + A A + +E + L+ST+ + + +A Sbjct: 299 VAELADARRAEPVATVARDADAARAKAAAAARNVEAITDGLRSTVGGADLVSELSWPPTA 358 Query: 340 ELQQQQQS-LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 + ++ +S + W E R E + + + LR Q +L A L+ Sbjct: 359 DEREHIRSRIRAWRDEIVRLDGALAES----LAADRLAVEVDRLRTRQVELAEAGDALSR 414 Query: 399 LAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 L L E AL + R LV + A L+ E+ + Sbjct: 415 -EREQLPLALREAEKALDSAQKARAAVPGLVDARDRAADAASAAADLRTRR----AERDR 469 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + + R+++++ + D+ Q L+ G PC +CGS+ HP Sbjct: 470 LERGVLDARRQHQDAREHWLDL----LQRRIAGMAAELAGTLEDGVPCQVCGSSEHPQPA 525 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 S L + + K + T++L E L Q Sbjct: 526 ---------EPSELSVTKTDEDKALAAEQKAAAAMTTATEKLGAVERAIGVLVQRGGDG- 575 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEH-ERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 D++ L A + L + + + Q+ Sbjct: 576 ---------------DADELAQALTAAETAVGEATALGDEVERRSASLTELRDRESHLQE 620 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 + T + Q E + ++ + S + R+ L AL +L Sbjct: 621 RSRDLGVDAATVAERITASTTQLGEIRARVSEAAGDDPSVEARRARLDALAESASELLDA 680 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 + + ++ ++ A++L Sbjct: 681 RDA-----------------------------GAGAESAARELAAKAETLA--------- 702 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 + FD +AA+ ++E + + A++++ Sbjct: 703 -GDAGFDSTADAVAAVRTAARQGEIEAVLTAARDAEVGARSVLDDPEVVAV--------- 752 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 A V + +Q + + + + ++L Q + IA M Sbjct: 753 AEADPVELASVQHAHDVAAEVVNVAVAAASDAERRLLDLERFVGQLDKAAEAIAPMQAAH 812 Query: 878 EDWGYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS--- 929 E+ L +I R + L+ + A+ +L R+ GRY Sbjct: 813 EELAALAEVIAGRGQNARKMSLRSYVLAARLEEVAVSASARLGRMSAGRYEFVHSDEAGP 872 Query: 930 ----EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 L +++ D + VR +TLSGGESFL SL+LAL L+D+V S +D++F+ Sbjct: 873 RGRRGGLGLDIRDDYTG-VVRSAKTLSGGESFLASLSLALGLADVVAAESGGVVLDTMFI 931 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLD++TLD+ + LD L G+ +G++SHV+ M++RIP ++ V + G S +E Sbjct: 932 DEGFGTLDADTLDSVMGVLDELRDGGRVVGIVSHVDEMRQRIPSRLHVIR--GRTGSTVE 989 Query: 1043 S 1043 Sbjct: 990 V 990 >UniRef50_B0A864 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A864_9CLOT Length = 1176 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 200/1199 (16%), Positives = 455/1199 (37%), Gaps = 176/1199 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + LNS + +DF+ S GLF I G TG+GK+T+LDAI +A+Y Sbjct: 1 MRPIRLEISGLNSYIEKQVVDFSE--LTSRGLFGIFGKTGSGKSTILDAITIAMYG---- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR-ARNQPDGNLQVPRVELARC 119 N+S+ + + + + FE+ + + + R R G R L Sbjct: 55 --NISRDTKEYINTSSDSAKIKYVFEIGNKHNKRRYCVERDFRRSKSGTANSSRAILTEI 112 Query: 120 ---ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA-KPKERA----- 170 ++A++ + + + GL FTRS++L QG+F+ FL K R Sbjct: 113 HMDNTESVIAEQKMNVDKAIIDIVGLTASDFTRSVVLPQGKFSEFLQLDDSKRREMLERI 172 Query: 171 -------------------------ELLE-----------ELTGTEIYGQISAMVFEQHK 194 E+LE E+ E Y +++ + + Sbjct: 173 FNLEKYGRSLTEKIKNKRDGKKIDIEVLENSLLQYDGTSQEIFD-ETYSKLTE-LQALSR 230 Query: 195 SARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNW------ 248 R EL++ + + + + Q + L +EK I + +E+ + Sbjct: 231 DMRRELDEAEKKYNDYKEIIGYQQSLEEKENKKLKLDEKSKIIEENKEKVERSGHAKIIN 290 Query: 249 --LTRQDELQQEASRRQQALQQALAEEEKAQPQLA--ALSLAQPARNLRPHWERIAEHSA 304 + + ++ S+ L +E + L Q E + Sbjct: 291 PHIKNVQDFEKSISQYSTELATLESECTSLNREYESTKLKYEQAQHEKDSKLEGLISSKQ 350 Query: 305 ALAH---IRQQIEEVNTRLQSTMALRASIRHHA---AKQSAELQQQQQSLNTWLQEHDRF 358 I+++I+++ +++ + + AK+ L ++ ++ +++E++ Sbjct: 351 KFERAIIIQEKIKDIISKIDALKSKIYDYEKEKSNLAKEIEALDEKNTQVSNFIKENESK 410 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 ++ + + + + +++ ++ + L +L ++ A Sbjct: 411 ISSLRTSEDFKEKVYKAFEVEKEYLRIKKEFEENQKDIPVLTKELDSLKSNFRYAENATK 470 Query: 419 AEQRPLRQ---------------------------HLVALHGQIVPQQKRLAQLQVAIQN 451 + L+ +L L+ + + +L QLQ Sbjct: 471 DVKTELKNANEKYDILVSKSPGTNDEIVVMSNKATNLKTLYEKTKRNESKLEQLQEKFNK 530 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 +E+ + + + +++ ++ + ++ +E + + +LQ G+PCP+CGS Sbjct: 531 DKEEKFKLDREVKSLKEELEKYKNERTSLEKNLNEEKFLNLANELKNELQDGKPCPVCGS 590 Query: 512 TSHPAVEAYQA-LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 HP ++ + + ++ +E +++++ ++ + Q + + E+ + Sbjct: 591 MHHPNIDKINNNDKINYIEEQIRKVEQKIEEITKDYDSSIRQQSKLLSTISMTEDSINEI 650 Query: 571 RQDEQ-------------------ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ 611 +++ +L ++ T + + + +++ + +++ E + Sbjct: 651 KREIGDSKSSDINDDLNMLSREIISLREKIADWTENKEKLEEQIKELEKTKNKREKEELE 710 Query: 612 LRL-----------------------------------------LSQRHELQGQIAAHNQ 630 L L ++ E + + + Sbjct: 711 LSKDILNKSDNLNSLKENVDKIGKNYDTIKKEYLYLVSNLKIDNLKEKVEEINKNSRIIE 770 Query: 631 QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 +I + +++ +++ + L + D+ S L + + L + Sbjct: 771 EIEKENSELKLKKEGIEADLKLKRDNFIELDKNISSLNKENESNLKDKSENETEFNLITK 830 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + +L+ + E E + + + L S+ ++ + + + + Sbjct: 831 GENPRHLLDNILDEIERITSTEAKLRVQVEEEKYKVEKLKSKTSEVKGKLQESKIKYKTS 890 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 + L F D A AL+DE+ +L+ + E + R + E L Sbjct: 891 KETLKDLLIEYKFRDIYAVKNALIDEEEREKLKDEIEFYEKEERALTIEIQNLKEKLHGK 950 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + + I+++ + + E T G + ++ N ++ + L +Q+ Sbjct: 951 TINLDEFL--------DIEKKKYKLGDDIDEITKQIGAKQNEVITLEKNLKKVKELQKQL 1002 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS 929 + ++E + L+ +G +F +F L+ +V A+++L + GRY+L+ + Sbjct: 1003 DESEHKLELLKEIEKLL---QGKRFVEFVAKNQLEYIVIEASKRLDIMTKGRYVLEIDDN 1059 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFG 987 L + D + R +TLSGGE+FL SLALALALS + ++ FLDEGFG Sbjct: 1060 --LNFVIRDNYNGGLRRSIKTLSGGETFLTSLALALALSSQIQLKGSAPLEFFFLDEGFG 1117 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 +LDSE LD +++L+ L++ ++G+ISHVE +K R+PV++ V +G SK+ ++ Sbjct: 1118 SLDSELLDIVMESLEKLHSEKLSVGIISHVEELKNRVPVKLLVTPNDGGNGSKISIEYS 1176 >UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax=Actinomycetales RepID=Q5YQ97_NOCFA Length = 1060 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 209/1122 (18%), Positives = 388/1122 (34%), Gaps = 138/1122 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + +DF + ++GLF + G TGAGKTT+LDAI ALY P Sbjct: 1 MRLHRLEMTAFGPFAQPTVVDF--DALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELA 117 S+ + +E + G R S R + G+ + P+ L Sbjct: 59 ARGESKRLHSDHAPAQTPPRVVLEATLGGRRLRLTRSPEFERPKLRGSGMRTEQPKATLE 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ D E L G+ +F + +LL QG FA FL A+ ++R +LLE+L Sbjct: 119 WLDGRGENLSRIPDIGEEIVRLLGMSADQFFQVVLLPQGDFARFLRAENEDREKLLEKLF 178 Query: 178 GTEIYGQISAMVFEQHKSA-------RTELEKLQAQASGVTLL--------------TPE 216 T +G + E+ +++ + +E+L AQ G L + E Sbjct: 179 DTRRFGVAEQWLAERRRASAADLEQRKQGIERLIAQIRGAAGLSVTESVGVLECVDWSQE 238 Query: 217 QVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA 276 + + L T + ++ L D+L++ + L + A ++ Sbjct: 239 LLATARDELAAATADAAAREQECAHLRKEAEELRTLDDLRRRMTAAHDQLTRYHATADQR 298 Query: 277 QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQI--------------EEVNTRLQS 322 + A L A+ A+ + + H + E + R Sbjct: 299 GARRAELEAARRAQPVTEAIDEARAAVMESRHRENEARTAARALATALAVPEAADLRADL 358 Query: 323 TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAG-------------WR 369 ++ ++ ++++ A + + + + AG Sbjct: 359 LVSDEGAVGPDSSREGAPVAETIGMTSALGSQEPEDTAAGRAAAGSETTDPHLRDGADLD 418 Query: 370 AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI--TLTLTADEVATALAQHAEQRPLRQH 427 A + ++ L + T A + LA + A A + + A Sbjct: 419 AAVRRWSTLIGALDAVRADATTAAESTAELANLRAEDDDLARRTAELIERRAALPESITA 478 Query: 428 LVALHGQIVPQQKRLAQLQVAIQNVTQ------EQTQRNAALNEMRQRYKEKTQQLADVK 481 + + L L + + E +R AL+ R ++ D + Sbjct: 479 VDRRLREAGDAAAALPALAAECERLQSAASAAVELAKRRTALDATRVEFETARAAHNDAR 538 Query: 482 TICEQ--EARIKTLEAQRA-QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 + E R+ + A+ A L GQPC +CGS HPA + + V++ A Sbjct: 539 ERVLEVRERRLAGMAAELASALVDGQPCAVCGSREHPAPA--EPADRAVSKEAEDAAVAA 596 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 + + + ++ + ++++ + E A + Sbjct: 597 ERAAEQRRDEIGARIAGLEREIEALIARGGDTDRVELAAALRSAT--------------- 641 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 + DA D ++ ++ L+G+ A + + + + A T Sbjct: 642 ARYEDAADTAAQREAAQAELDRLRGEEARSHDDLRAAEAR-------RSAVAARIAATED 694 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 + L +QR+ L AL + L + + + V Sbjct: 695 RLARATESLRRAAGADTDVEQRRTRLEALIDTATVLLRARAAVATARQHVTVVAKRVENL 754 Query: 719 WRQVH---EQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 ++ + T + V AA + Q + + L A+ A Sbjct: 755 AAAAGFVPDEVPEDEVARLTAFARVVNAAARPRPRQDEIEAELTAADRARAAAEAVLAEP 814 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT 835 E + P D +A+ + QQ Sbjct: 815 EIQAAAAAE------------------------------PGDLVAVEQALTHAQQRSNAA 844 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF 895 E + + Q + L + ++ + + + Sbjct: 845 VAAKAEAGRRVQLLEELGTQLWTEVDRLAPLQRAHDELDRLADVVAGRGE---NNRRMSL 901 Query: 896 RKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQADAVRD 947 R + L+ + + +L R+ GRY L +++ D + AVR Sbjct: 902 RSYVLAARLEEVALAGSVRLRRMSGGRYEFVHSDKAGPRGRRGGLGLDIRDDYTG-AVRP 960 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +TLSGGE+F+ SLALAL L+D V S +D+LF+DEGFG+LD++TLD + LD L Sbjct: 961 AKTLSGGETFMASLALALGLADTVAAESGGVVLDTLFIDEGFGSLDADTLDAVMGVLDEL 1020 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 A G+ +G++SHV+ M++RIP ++ V + G S+LE+T A Sbjct: 1021 RAGGRVVGIVSHVDEMRQRIPSRLHVIR--GRDGSRLETTVA 1060 >UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 Length = 966 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 249/1052 (23%), Positives = 413/1052 (39%), Gaps = 104/1052 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ + +DF+ LFAITGPTG+GK+TLLDAI ALY + PR Sbjct: 1 MRPLRLELEGFGPYRERQAVDFSDVE-----LFAITGPTGSGKSTLLDAIAFALYGQVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + L A+ + F V YR S++ R RV L Sbjct: 56 VG---RQVGTLKHPAAAKAWVSLTFRVGERVYRVERSRSEKRG-------DARVYLLEGG 105 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + ++ A L GLDY FTR++LL QG+F FL +PKER +LL EL Sbjct: 106 ERLLDLPTLEAVNRALADLVGLDYEAFTRALLLPQGEFDRFLKGEPKERRQLLLELFELS 165 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 + E+ E +L+ + +G++ TPE ++ L +L E +L + Sbjct: 166 RLERARQKAAERRGLLLEEKGRLEGELNGLSAATPEALEELERALAASRAEAARLEEEAR 225 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++L E + L+ A E+ LS A+ A P W Sbjct: 226 GVRKALAEAEALLEDLRRRQALAARLEALKARAEEMARVEERLSRAEEAERALPLWRDYQ 285 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + AAL + +EE RL++ A R ++ S E ++ Q+ Q+ F Sbjct: 286 KKRAALQATEKALEEAEGRLRALEARREAL-----GFSPEALERAQAAYAEAQDLKAFEA 340 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT--ADEVATALAQH 418 +A S Q +L + L AL A L L A+ A+ Sbjct: 341 LLARAPAGKAPASGPDPA-----TAQARLEEVLKALEALGAELLRLRAWAEAWEALRAKE 395 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ-EQTQRNAALNEMRQRYKEKTQQL 477 A + + L L + ++ L + ++ +Q AL R+ ++ + L Sbjct: 396 AALAEVGEALARLEAEGKEAREARDALALRLKEAEAHALSQALKALEAERKALEKAQEDL 455 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + +E R L A L+ G+PCPLCG H E ALE Sbjct: 456 DRRREALLREERRLGLLAYHDLLEPGKPCPLCGGVVHALP---PLPEVPDLAGARRALEE 512 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENE-----AQSLRQDEQALTQQWQAVTASLNITL 592 E + L A L + + +L+ E E ++L+ +A + Q + Sbjct: 513 EAQALARRLARLEAEAGDLAARLRALEVEPRPGDPEALKGALEAAEARLQDLRDRYQALR 572 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 ++ + A E + R + R +L ++ A + + +++ + L L Sbjct: 573 GEARALEREVAALRAREAEARGGASREDLASRLEAAEARRLALEEEAGRLAAGLRRHLEA 632 Query: 653 YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEE 712 L +L ++E + + E L+ L L L E Sbjct: 633 KTGGLG----VGPYLRRLKEEVERLKGLAAEDARLREEAGALRAELSALRARKEEQAKAL 688 Query: 713 TVVLENWR----QVHEQCLALH-SQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 R + Q LAL +++ L+ + + L +A+A + + S Sbjct: 689 AEAEAATRGLMPEAEAQGLALSPGEREALRAELEAFRKDLAEAEAAWRSLPPLSGPAP-- 746 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 LE + + + L AE + ++ R ++G AL VE+ Sbjct: 747 --------------------TLEEAQGRVEALRKALAELEGRLEEKRKEEG-ALEDRVER 785 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 ++++LA +++ + +A++ ++ W L Sbjct: 786 LRKDLA----------------------------RRREVEGALARLVAELALWE---KLA 814 Query: 888 GSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVR 946 + F + GL +LV A++ L L GRY R A++ E VVD W R Sbjct: 815 LDLQAHNFPAYLLGLKQRSLVERASELLYTLSGGRY---RFAAQGDEYLVVDLWAEATAR 871 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 RTLSGGESFL SLA + ++++LFLDEGFGTLD E L+ L++L Sbjct: 872 QVRTLSGGESFLASLA-LALALSEELSRGKLEALFLDEGFGTLDPEALELVAGILESLPT 930 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 G+ +GV++HVEA+ ER P +++V+K Sbjct: 931 RGRLVGVVTHVEALAERFPARLRVRKHPWGSR 962 >UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=SBCC_BACSU Length = 1130 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 222/1146 (19%), Positives = 429/1146 (37%), Gaps = 129/1146 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK ++L +K L+S + E IDF E + G+F I GPTG+GK+++LDA+ LALY + R Sbjct: 1 MKPIALSIKGLHSFREEQTIDF--EGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +N + ++ F ++ ++ + + + ++ Sbjct: 59 AANNTHG---ILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTDEMKVKTALCRFIEIK 115 Query: 121 DG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D +LADK + + L GL FTR+++L QG+FA FL+ K ER +L+ L Sbjct: 116 DEHTVLADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNL 175 Query: 180 EIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E YG ++ + Q + A ++ A+ SG+ + E V+ L+ + + Sbjct: 176 EQYGDRLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQAEKVLEQAEARLEAMRKN 235 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + Q ++ +Q+E S ++ ++ E+ L A+ A L+P+ +R Sbjct: 236 RDQAKERFTEHQEIWNVQKEKSTYEEEEKRLAEEQPHIDSMQKRLLEAETAAALKPYADR 295 Query: 299 IAEHSAALAHIRQQIEEVNTRL-------QSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 AE ++ L Q + R H +++ EL +Q+ L+ Sbjct: 296 YAEAIQHEEQAEKEQTLAQKDLADRTAFFQQKHEEYEAWRQHKSEKEPELLAKQEQLSRL 355 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDRE----HLRQWQQQLTHAEQKLNALAAITLTLT 407 + + + E +A Q+ + L +LT + + L +L Sbjct: 356 QEIEIKLSEAKQEEERKKADLRQKEEALQSVMNELETVTDRLTRGQNRQTELKQQLKSLQ 415 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN--- 464 Q A + LR + QI ++KR +L + +Q + +E+ Sbjct: 416 VTSDERKSCQQAAEMALR--IRQTEEQIKKEKKRSEELNLVLQKMNEEKNTLVQKTEAEE 473 Query: 465 ------------------EMRQRYKEKTQQLADVKTIC----EQEARIKTLEAQRAQLQA 502 E + T++ + E+ + +L A Sbjct: 474 NNIIQAYEAVQTVYHLVCETERSLTRMTEEARKSQHTLHLQREKARVALLTKELAQKLTA 533 Query: 503 GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 G+PCP+CGST H + E S L L E A L ++ ++ ++ Sbjct: 534 GKPCPVCGSTDHDPSASVH--ETYEADSHLEEDIKRTDVLLTEAAALSQEI--LSAKIML 589 Query: 563 DENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ----------- 611 +E A+ + Q T Q Q + A+ + QP+ + + + +Q Sbjct: 590 EEQSARFIEQCPFLQTIQAQNLEAAASFEHQPVYEAFETAKFEWKRIKQDILSVKTRMAQ 649 Query: 612 -----LRLLSQRHELQGQI---------------------------------AAHNQQII 633 L + +L +I + Sbjct: 650 MIGAYQESLKKAEQLNEKIGFEKREADRIESIISELQSSMDSSLNMFKEAFQNQSVDEAE 709 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 ++QQ IE++ + ++ E E+ ++ ++ + EL RI+ Sbjct: 710 KWQQAIEEKDRAAEECEKRIEKSIAFLAEHEAQKEKLRESGHRLEREKLELHYAAERIKS 769 Query: 694 LTPILE-----------------TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 + E ++ Q +L +E + E + + S+ Sbjct: 770 VIADYEHELGDYAKGDSIQIKLRSVQQDLKLLKEKEQSLYEELQSAQMKLNQAKSRASAS 829 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 + A L+KA+A + + + + +L+ L +++ ++ +Q Sbjct: 830 ELTLQEAKGRLEKAKAAWLEHTKNTSITRTEEVEQSLIPADELEKMKTGIDQFMDKLKQN 889 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 + + AE LA + + L + +G + L Sbjct: 890 AANLKRVAEILAGRALSESE--------WNETVAALQEAEDAFGAAIEEKGAAAKALAVI 941 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 D+ ++ + ++ + ++ L ++ +G+ F +F L+++ A+ +L+ Sbjct: 942 RDHHKRFNEIEAELKKWQMHIDRLDKLQAVF---KGNTFVEFLAEEQLESVARDASARLS 998 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 L R + + D R +LSGGE+FL SL+LALALS + + Sbjct: 999 MLT-RQRYAIEVDSEGGFVMRDDANGGVRRPVSSLSGGETFLTSLSLALALSAQIQLRGE 1057 Query: 977 --IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 + FLDEGFGTLD + LDT + AL+ L + +GVISHV+ ++ R+P ++ V Sbjct: 1058 YPLQFFFLDEGFGTLDQDLLDTVVTALEKLQSDNLAVGVISHVQELRARLPKKLIVHPAE 1117 Query: 1035 GLGYSK 1040 G Sbjct: 1118 PSGRGT 1123 >UniRef50_C7TAC3 DNA repair ATPase n=8 Tax=Lactobacillus RepID=C7TAC3_LACRG Length = 1043 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 216/1078 (20%), Positives = 403/1078 (37%), Gaps = 76/1078 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L ++ E E F + LF I+GPTG+GKTT+ DA+ ALY ET Sbjct: 1 MKLKQLHMQFFGPYADETV---NFEDFRTTPLFLISGPTGSGKTTIFDALVYALYGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + Q +++ + + F+ G+ YR + + + G + LA Sbjct: 58 ERDGMQMRSNFASHHDL-TKITLTFDHDGKHYRVVRQPQQIQQKKRGDGLTEVKAKAILA 116 Query: 118 RCADGKILAD--KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 K +A+ K + LD +F + +LL QG F FL+A + +LL + Sbjct: 117 IADADKQVAEYTKKNQVQSQLDAILHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRD 176 Query: 176 LTGTEIYGQISAMVFEQHKSA-------RTELEKLQAQASGVTLLTPEQ---------VQ 219 L GT++ + + Q K L L +Q T + Q Sbjct: 177 LFGTQLIQRWQTAMQAQTKQQGAAIQDQERMLNLLTSQFEFATPPSDNATMADKLALMRQ 236 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 +T +T+ + Q Q + L +L Q R+Q E+ Q Q Sbjct: 237 EVTQQATTVTNLQTMADQRHQCYQTAQTALQTGKQLAQAFEDRKQTAAALAQLAEQKQTQ 296 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 L L + ++ H A + ++ + Q+ M A + Sbjct: 297 QDRLKLMERLTWVQEHEAAEQRVQRAARDLTIAKTQL-VQTQTAMKTAQQAMDQAQTKLN 355 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 +LQQQ ++ + D+ + + Q Q + Q + A++KL Sbjct: 356 DLQQQDSAIEAKKTQLDQLQSVKQQLVAIADQEKQVAQQTAAVAQAEAASVQAQKKLAND 415 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 + A++ A++ H Q+V K +A ++ + Sbjct: 416 QKKLDQYQTELNQLAVSDLADRAAD-------HKQLVAALKPVAANYQDAHAEAEQLASK 468 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + + +Q +Q + + A+L G PCP+CGS HP Sbjct: 469 LTDTKTLLIQATNVSQSAEQQLNQLQQTQIRQQIAQLAAKLTPGTPCPVCGSVEHPHPA- 527 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 EP V ++ + ++ + TL+ Q+ +L + A T+ Sbjct: 528 VALDEPLVTEAEVKQATQARQQAAAKETTLQAQV--------------SNLEEQHAAATK 573 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 + S + D Q + +QL +L ++ + Q + Q ++ Sbjct: 574 KSNVAKNSFWAQVSSSIDAVSPQSEQSDVLKQLAILEEKAQAAVQALSAAQIRQDALKKA 633 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 Q +++ + + + + L A ++ +T Sbjct: 634 ITVGQTVVSADDQEIQ--ATQSALNTAKIEAAKANSVLTTMKASLPAGTTDLKTVTEQSH 691 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L ++ + + + Q LH+ ++ Q + Q+A+ F +A+ Sbjct: 692 VLTEAIKTYQEQLKTAQRQLSEFDRQLAGLHADERHATDQIATLKKEHQEAEDGFLSAVT 751 Query: 760 ASVFDD-QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 D F A L L+Q Q ++ + QTL+ +T+ Q Sbjct: 752 DYFGSDGVAKFAAMREQLGQLPLLQQQTQRYKDDVLKQQTLLAAANKTIGNQPQ------ 805 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 ++Q++ + + + + T+ E +Q+ +Q ++ Sbjct: 806 ----PALDQLEAQASAAEAEATKAQTAFIEAKQKHDTAQKLLEQAADILAANQTALAAYA 861 Query: 879 DWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS------ 929 D L +++ K ++ L +++ +AN +L L RY Sbjct: 862 DLQTLTAVMNGNGPKKLSLERYVLQAYLQDVLDVANTRLQVLSNQRYQFVLHTDLGTQKI 921 Query: 930 -EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEG 985 LE++V D Q R +TLSGGESF+ +L+LALAL +++ S ID+LF+DEG Sbjct: 922 HSGLEIDVYD-DQVGERRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEG 980 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 FG+LD+ +LD A++AL++L + IG+ISHV +++ IP Q++V+ G G S+++ Sbjct: 981 FGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVQPA-GTGRSRIKV 1037 >UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycetales RepID=D1VDP9_9ACTO Length = 1068 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 232/1099 (21%), Positives = 387/1099 (35%), Gaps = 87/1099 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + GE ++D R + GL + G TG GKTTLLDA+ ALY P Sbjct: 1 MRPHRLELVAFGAFPGEVELDLDR--LGAGGLVLLCGETGGGKTTLLDAVGFALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ--NRARNQPDGN-LQVPRVELA 117 L V ++ D A +E+ V +R + +R R + DG Q P L Sbjct: 59 LRGVRDLRSHHAAPDVAP-RVRLEYSVPAGRFRVTRTPGWDRPRRRGDGTQRQHPTALLE 117 Query: 118 RCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R A+ + D G+ +F + ++L QG+FA FL+A R LL++ Sbjct: 118 RWTGSGWAAEATRNEDVGHEVNGHLGMRPEQFFQVVMLPQGRFADFLHADNDAREALLKQ 177 Query: 176 LTGTEIYGQISAMVFEQHKSA-------RTELEKLQAQASGVTLLTP----EQVQSLTAS 224 L + ++ + ++ K A R +L+++ A+ + E Sbjct: 178 LFSVGRFERVEQWLADRAKRAADDHGLARQDLDRVHAKVTEAAGPPEAGDTEAAVPAGTE 237 Query: 225 LQVLTDE----EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL---QQALAEEEKAQ 277 TDE + A + + R+DE QQ ++ L ++A+ E+ Sbjct: 238 SATATDEPPAPDWARALAAGAAEAAQAADRRRDETQQVRDLAERGLAMTREAVRRAEERA 297 Query: 278 PQLAAL-SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAK 336 L L L + A + +A + A A R E Q+ A A AA Sbjct: 298 QLLRRLAELDEQAPQVEELAAELAAATRAGAVSRAIAETQRRAAQAAQAETAQAAARAAV 357 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 +A L A + + + L + Sbjct: 358 AAAALPDAGDPPRETADATADELAALAADAHAESGRLEPLALVLVAAHEDAALADLADRE 417 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 A + E+ T L + + G + P L + + ++ Sbjct: 418 ALEHAQAAAVREAEITTTLPARRQAAQEQADAARRAGHLAPA---LTERSEQLADLADAV 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 +R AL E + T+ A + +Q A L PCP+CG+ HP Sbjct: 475 RERRRALAESTEAAASATRARARAVELRQQ-RFDAITAELAAALADDTPCPVCGALDHPD 533 Query: 517 VEAYQALEPGVNQSRLLALENEVK-----KLGEEGATLRGQLDAITKQLQRDENEAQ--- 568 +A + R + ++ A L GQ+ + L R Sbjct: 534 PAEVRADHVSKDAERDADAAATRREAAAGTARDQVAGLTGQVRTLLAALLRSPAALADGP 593 Query: 569 ---------SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 ++ + + V L L D L +D+ + Sbjct: 594 RPGGGASDAAVAGADSSGDDAAATVAGMLADLRGTLLDEAVLLTDEDDLG-----AAGPD 648 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 +I A + Q L G A + + + LAT + E ++ Sbjct: 649 RTAAEIDAVARAFGAAAGQAASSAADLTGAQAGLAALVEAQTRAHADLATHRAEERA--A 706 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 A + L + L L + V H + + Sbjct: 707 GLRAAAARDRAARALATVPSALRDPALLASRVDAVARFARACAHAEQAV---------RA 757 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A L++A A A + F D A LAA+ + L + ++ R + Sbjct: 758 AAQARDELRRADADAAEAATEAGFADPGAALAAV---REPDWLADAQTRIQGHRDE---R 811 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + + A DD A E+ H++ + + ++L+ + Sbjct: 812 IQARSRLAAPELAAAADDPSARLDEHERAAAAAKAAHEEAWATAATAAQRARRLEALVEE 871 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLN--SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 + Q+ L ++ G + L+ + H A+++L Sbjct: 872 YAGAHAALSPRRAAAAQLRQLADLAIGRAPANQHGMPLSSYVLAARLEEVAHAASRRLAA 931 Query: 918 LHG-RYLL--------QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 + G RY L R+ L + V+D W R T TLSGGE+F +L+LAL L+ Sbjct: 932 MSGGRYTLVHDTGERRDRRRKAGLGLLVLDAWTG-RSRPTATLSGGETFQAALSLALGLA 990 Query: 969 DLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 D+VS ID+LF+DEGFGTLD ++LD ++ LD L A G+ +GV+SHV ++ RIP Sbjct: 991 DVVSAEAGGHAIDALFVDEGFGTLDPDSLDEVMNVLDELRAGGRLVGVVSHVADLRLRIP 1050 Query: 1026 VQIKVKKINGLGYSKLEST 1044 QI+V+K G S +E+T Sbjct: 1051 TQIQVRK--GPSGSTVETT 1067 >UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR2_9CHRO Length = 1021 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 237/1088 (21%), Positives = 400/1088 (36%), Gaps = 142/1088 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ I F + +GLF I G TG+GKT LLDA+C ALY E Sbjct: 1 MRPHLLEMEAFGPYAEPVTICF--DTLCRDGLFLIHGSTGSGKTYLLDALCFALYGEVSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 ++ ++D A +EF G +R + G + L Sbjct: 59 ERSLKGLRSDH-APPQALPQVSLEFSAAGGRWRVERQAACEVPKSRGQGTTSKGAKAGLW 117 Query: 118 RCADGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R G+ +A V++ A L GLD +F + +LL QG+FA L A+ ++R LL+ Sbjct: 118 RLLGGEPQPVAAGVQEVGREVARLVGLDAAQFRQVILLPQGRFAEVLRARDEDREALLKT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV------------------------- 210 L T +Y + + Q K+A EL + Q Q + Sbjct: 178 LFDTSLYERAMGWLAGQAKAAEEELRERQRQQRHLLEQIAAAWEPWQREGQSSEKPPGEA 237 Query: 211 ---------TLLTPEQVQSLTASLQVLTDEEK----QLITAQQQEQQSLNWLTRQDELQQ 257 + L PE + ++ +++ L + + Q Q L L + EL Sbjct: 238 PEEASPDLPSELLPEHLPTVQGAMEALQQQAALHLDRAEARFLQAQAGLAELRSRAELWD 297 Query: 258 EASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN 317 R Q LQ+ ++E A L+LA+ A +R A+ + Sbjct: 298 RRQRAQARLQELAQQQEPMVALQARLALAERAETVRASMLSEADARQRREEAETR----- 352 Query: 318 TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS 377 R + AA Q+ + L L E R N A + + Q + Sbjct: 353 ---CRQRLERLRRQRDAADQAPDAVMALGLLE--LPEPARLTTALNALAVRQGELEQVLA 407 Query: 378 DREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 E R +++ A Q+L Q+PL Q A G Sbjct: 408 LAERRRGARREEERARQELQEANGRIARGQELLAQEQSRLDGLQQPLLQARSARDGLTGL 467 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + +++ QE+ R E Q A + +E +++ + A+ Sbjct: 468 ELAARQAARISTALQQQEEAVRQLQQATAAVLAAEAAQHQARTHQLDLRERQLQGMAARL 527 Query: 498 AQ-LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 A LQ G+PCP+CGS HP + V + L A E+++++ G R + Sbjct: 528 AADLQEGEPCPVCGSRQHP--QPAPVAADAVADAALAAAEHQLEETGRALVAARATQAGL 585 Query: 557 TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS 616 QL+ ++ P + AQ E R + L Sbjct: 586 QAQLEALADQL--------------------------PEGPLPSLQAAQAEAARAVAELE 619 Query: 617 QRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS 676 L G + + Q + +++Q QQ L E++ LA Q + Sbjct: 620 GARRLAGALDGLEAERQQAEHRVQQFQQRLRQREEETIGCRQVLAEKQKGLADLNQRITA 679 Query: 677 WQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 ++ L +IQ L LETL ++ + ++ E R++ Sbjct: 680 GLGGDHDPATLLLQIQGLMQALETLIEAAQQRALALSLETEAQRRLAGD----------- 728 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 L + F+D QA + AL E + Q R A Sbjct: 729 ---------------------LARAGFNDPQALVQALAPEAERLAWSRTLQQHAADRALA 767 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 Q ++ + A + L ++ + LA R+ + Sbjct: 768 QGVLAELA----------GQELPELRPDLQAAETGLASADAARRDALARFTRAETAVTAI 817 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG--DKFRKFAQGLTLDNLVHLANQQ 914 Q+ T ++A+ +Q + + + + +++ L+ + AN + Sbjct: 818 TGLIQRHGTGAAELAEQQRQADLVQGVAARCLGQSDPHISLQRWVLSAYLEEICGYANHR 877 Query: 915 LTRLH-GRYLLQ--------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 L+++ GRY L+ R + L + V+D + R+ +LSGGE+F SLALAL Sbjct: 878 LSQMTAGRYELRLSDASGQRRGSKAGLGLRVLDAYTG-EEREVSSLSGGETFQASLALAL 936 Query: 966 ALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 ++D V S +++LF+DEGFG+LD ++L A+D LD L G+ IG+ISHV A++E Sbjct: 937 GVADTVQAHSGGVVLEALFIDEGFGSLDPDSLHLAMDELDRLREGGRMIGLISHVAALRE 996 Query: 1023 RIPVQIKV 1030 RI ++V Sbjct: 997 RIRTGLEV 1004 >UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX1_9ACTO Length = 983 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 218/1067 (20%), Positives = 400/1067 (37%), Gaps = 117/1067 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+++ L + E +I F F S GLF + G TG+GK+T++DA+ ALY E Sbjct: 1 MRLIELNFAAIGPFPEEHRIRF--ADFESAGLFLLRGATGSGKSTIIDAVLFALYGEAAI 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQN--RARNQPDGNLQVPRVELA 117 ++++ S R AE+ FEV YR S +A N+ +L Sbjct: 59 KITSSSLRLRSNFARKEMNSYAELIFEVPSGIYRIQRSPAYVKAGNKNATAATAVLEKLV 118 Query: 118 RCADG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 D + LA K +D L + G+ +F ++++L QG+FA F+ A P R +LL Sbjct: 119 VVEDEVISREPLAAKPRDVNALIPEIVGIQADQFLQTVVLPQGKFAEFVRATPDARKQLL 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEK--LQAQASGVTLLTPEQVQSLTASLQVLTDE 231 +++ T+ + + + E+ ++AR + E+ L+AQ T+L E + V D Sbjct: 179 QQIFKTQHFNTFTEKLKEKARAARAQYEETSLRAQQLTATILGAENNLQDATVISVEVDS 238 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQ-QALQQALAEEEKAQPQLAALSLAQPAR 290 + + A+ Q +L T+ + + + + L+ AE + + A+L+ Sbjct: 239 LLKNLKAEVSTQTALLHGTKTLLREAKFTYAEVSELKGLQAEFTLVEAEYASLNQRVAEM 298 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 +A + + + + E+ T LQS + + +++ + +S Sbjct: 299 QELAETIELARQAQPVLSVAEAFEKAQTNLQSLHIRLEAECDYHLEET--VNTAWESAEA 356 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 L E + A Q R+ L ++ + ++ L + A Sbjct: 357 LLTEKTQTEAT---LTQQLAVIKQLNEKRQTLVNKVAEVAQLKATVSE-QEQLLEMAAAP 412 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + L E L + Q+ + RLA + +A Q + +RQ Sbjct: 413 MEQQLKNITELEAEVTQLPLVAEQLTEFKNRLAFVDLADQKRKELVECAELIGTRVRQLE 472 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS 530 K + + + + T A QL+ G+ C +CGS HPA+ E Q Sbjct: 473 SAKRE-----SQVIWERWKENTAGALATQLKDGEACFVCGSVEHPALAMESNCEAVSTQ- 526 Query: 531 RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI 590 ++ ++ E + L+ + + E L + A+ + A Sbjct: 527 -------QLAEVAEAENEAKLLLEKTQDKHVQLNTEIAELNKQAGAMRLHLEDGIAEREQ 579 Query: 591 TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 L+ L Q + L+ S Q+ QQ+ + + E+ Q+ + + Sbjct: 580 LLRDL---------QAKEAAVLQAKSDYDAALAQLTEIRQQVSLAKVRSEEIQKTITSLE 630 Query: 651 TGYALTLPQEDEEES-WLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 A L + Q + + L L +++Q LT I + Sbjct: 631 AEIATAEATTLGLSEVDLVAKTQSLSAEVTKLRALVNLLSQLQSLTEIASQTEAELQQAL 690 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 E SVF Sbjct: 691 TE-------------------------------------------------SVFSSVNEA 701 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 A+ + L + QL + + Q +T + L ++ +E ++ Sbjct: 702 KQAVEAVEPLDEKLQLVASFHAKHAQVKTRFLELRSVLETVREL---------PDLEHLK 752 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 ++ ++ Q E +LKQ + Q L+ +++ + + L++ Sbjct: 753 TVISSLQEQQDNFYALQAEATAELKQVQNQAVQLDNLLAELSDLEARNGVVLRLSAFAAG 812 Query: 890 KE-----GDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASE--------ALEVE 935 + + + ++ AN + G R+ L R + L + Sbjct: 813 AKTVTGVEIPLSTWVLMERFEAVIAAANPFIASFSGSRFKLVRVDDDANSQARHGGLGIA 872 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSE 992 V D+ D R ++TLSGGE+F VSLALAL L+++VS S+ +DEGFGTLD E Sbjct: 873 VYDSET-DQQRPSKTLSGGETFYVSLALALGLAEVVSAEAGGIDFRSMLIDEGFGTLDPE 931 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 TLD L+ + +N SG+T+G++SHVE ++ RI I+V + G + Sbjct: 932 TLDKVLEGIKKINQSGRTVGIVSHVEELRRRISDGIEVFPRSEGGST 978 >UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNI5_HAHCH Length = 1229 Score = 335 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 289/935 (30%), Positives = 448/935 (47%), Gaps = 97/935 (10%) Query: 205 AQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLT-RQDELQQEASRRQ 263 QA T ++SLT SL++ E ++ + +++L L +++EL+ + + Sbjct: 298 QQAHDAYAQTERHIKSLTESLELARVELERKSSELALAKKALMQLQTQREELESLVAEKV 357 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 L QA+ + Q ++A+ R E+ S L +R++I+ N L+S Sbjct: 358 MPLDQAIEQLNSLMGQQQE-TVAEVVRRRDESSEQEKALSVQLKALREEIQAANEYLESR 416 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 + + + Q+ + + + Q + E L+ Sbjct: 417 RSHKLLPESLPLWRERLAQRTKARGELTKLAEAIKAREAEQRKQEVESGRLQEAQTEALK 476 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 ++ A+ + T E+ LA + R R L L +++ LA Sbjct: 477 VLEEHRRVVADTQKAILGVLSGETDAELRECLASMQKSRTDRFRLGRLADDYGKRRQELA 536 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 +L+ +Q E Q +L MR++YK + L D+ + ++E +I +L R++L G Sbjct: 537 ELKAQLQEREGELAQGKQSLLMMRKQYKAEKAHLDDLDRLMQKERQIASLSEHRSRLSPG 596 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 +PCPLCGS HP + AY+A + + RL ++++L E+G L ++ +L+ Sbjct: 597 EPCPLCGSHEHPGIAAYEAQQESDTEKRLQEKRKQLQELEEKGKKLNEAAARLSSELEIG 656 Query: 564 ENEAQSLRQDEQALTQQWQAVTAS--------------------LNITLQPLDDIQPWLD 603 L ++ AL +W + L + + + Sbjct: 657 AGARGKLEREMTALQAEWTQLCGEFGVNLVIDAPAGAQNAVDVYLQKEEAKENALAERVR 716 Query: 604 AQDEHERQLRLLS-------------------QRHELQGQIAAHNQQIIQYQQQ---IEQ 641 + ++ E+QL+ Q+ +LQ N Q+ Q +Q + Sbjct: 717 SLEQTEKQLQQAKESATAAEQELGEILRKLELQQRDLQNLSKEINAQLTQQAEQSAALSA 776 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET- 700 +Q + +P+++E+++WL TR EA+ +Q RQ +L + L LE Sbjct: 777 LEQGVSEAFATLGYAMPRDEEQDAWLETRNAEAREYQARQEKLEQGVKQAGDLERQLEHA 836 Query: 701 --------------------------LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQ 734 ++ + E +++ EQ A + Sbjct: 837 AEKATEIAQTLKGLQENLTQTQAALAEKKAQRQALFGDKSPTEERKRMQEQLAAAEKRWT 896 Query: 735 TLQQQDVLAAQSLQK---------------------AQAQFDTALQASVFDDQQAFLAAL 773 TLQ+ A +LQ+ A+ + AL AS F DQ AF AL Sbjct: 897 TLQEDKERADTALQQHLGREELLKTQLGSQRALLSDAERLWSEALAASRFADQTAFEQAL 956 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 ++E+ L LKQ L+ Q+ +A TL + L + A ++ ++ ++L Sbjct: 957 LNEEERQALAVLKQELDQQKDRAATLKQRAEAELNELLA-----TPATQLSEPELAEQLQ 1011 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 L+ + QGEIRQ L+ D R +Q L+ I Q+ +DW YL+SLIG+ +G Sbjct: 1012 TVADGLKAVSQKQGEIRQLLQSDQTRRMSRQKLLVDIESQQQRYDDWAYLSSLIGAADGA 1071 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 KFR++AQGLTLD+LV+LANQ L+RLHGRY L+R+ EALE++VVDTWQAD VRDT+TLSG Sbjct: 1072 KFRRYAQGLTLDHLVYLANQHLSRLHGRYELERREGEALELQVVDTWQADTVRDTKTLSG 1131 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 GESFLVSLALALALSDLVSHKT IDSLFLDEGFG LDSETL+ ALDALD LNASGK IGV Sbjct: 1132 GESFLVSLALALALSDLVSHKTSIDSLFLDEGFGALDSETLEVALDALDCLNASGKMIGV 1191 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 ISHVEAMKERI VQIKVKK++GLG S+L++ + ++ Sbjct: 1192 ISHVEAMKERISVQIKVKKMSGLGVSRLDNRYCLE 1226 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 270/924 (29%), Positives = 424/924 (45%), Gaps = 51/924 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLRLKNLNSLKGEWK+DF +PF SNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRLKNLNSLKGEWKVDFRADPFHSNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + NVS + N++MTR TAECLAEVEFEVKGEAYRAFWSQ RARN +G Q P VELA A Sbjct: 61 I-NVSPTNNEIMTRHTAECLAEVEFEVKGEAYRAFWSQRRARNLAEGRFQPPHVELA-TA 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKL L A LTGLD+ RFT+SMLL+QG FAAFLNA ERAELLEELTGTE Sbjct: 119 DGKILADKVKDKLTLIAELTGLDFARFTKSMLLAQGGFAAFLNAPANERAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+ISA VFE+ + A+ ELE+L+A+A G LL+ +++ + L +EK + Sbjct: 179 IYGKISARVFERQRDAKGELERLRAKAEGQDLLSDDELTAYYEESTALETQEKTEAERLE 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + WL R + QQ + L +A A E+ + L L+L++PA LRP ++ Sbjct: 239 SLRTQKQWLDRVTQAQQSFKEAELRLTEATARLEQEKTDLGRLALSEPAEKLRPFYKDYQ 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA---KQSAELQQQQQSLNTWLQEHDR 357 + A A + I+ + L+ A K +LQ Q++ L + + E + Sbjct: 299 QAHDAYAQTERHIKSLTESLELARVELERKSSELALAKKALMQLQTQREELESLVAE--K 356 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN-ALAAITLTLTADEVATALA 416 + + QQ + + + + + E+ L+ L A+ + A Sbjct: 357 VMPLDQAIEQLNSLMGQQQETVAEVVRRRDESSEQEKALSVQLKALREEIQAANEYLESR 416 Query: 417 QHAEQRPLRQHLVALH-GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 + + P L Q + L +L AI+ EQ ++ +++ E + Sbjct: 417 RSHKLLPESLPLWRERLAQRTKARGELTKLAEAIKAREAEQRKQEVESGRLQEAQTEALK 476 Query: 476 QLADVKTICE--QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 L + + + Q+A + L + + S + A + G + L Sbjct: 477 VLEEHRRVVADTQKAILGVLSGETDAELRECLASMQKSRTDRFRLGRLADDYGKRRQELA 536 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 L+ ++++ E A + L + KQ + ++ L + Q Q ASL+ Sbjct: 537 ELKAQLQEREGELAQGKQSLLMMRKQYKAEKAHLDDLDRLMQKERQ-----IASLSEHRS 591 Query: 594 PLDDIQ--PWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 L + P + + Q + + ++ +Q+ + +++ ++ + + Sbjct: 592 RLSPGEPCPLCGSHEHPGIAAYEAQQESDTEKRLQEKRKQLQELEEKGKKLNEAAARLSS 651 Query: 652 GYALTLPQEDEEESWLATRQQEAQS------------------------WQQRQNELTAL 687 + + E + Q E Q+ + + AL Sbjct: 652 ELEIGAGARGKLEREMTALQAEWTQLCGEFGVNLVIDAPAGAQNAVDVYLQKEEAKENAL 711 Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 R++ L + L Q+ E E + E R++ Q L + + + Q A+ Sbjct: 712 AERVRSLEQTEKQLQQAKESATAAEQELGEILRKLELQQRDLQNLSKEINAQLTQQAE-- 769 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 Q+ +AL+ V + A+ ++ + + + + Q + Q + Sbjct: 770 ---QSAALSALEQGVSEAFATLGYAMPRDEEQDAWLETRNAEAREYQARQEKLEQGVKQA 826 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 ++ T +I Q L + L + + E + Q + ++ + Sbjct: 827 GDLERQLEHAAEKAT----EIAQTLKGLQENLTQTQAALAEKKAQRQALFGDKSPTEERK 882 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKE 891 + Q+ + W L + Sbjct: 883 RMQEQLAAAEKRWTTLQEDKERAD 906 >UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8MJ39_ALKOO Length = 1174 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 212/1190 (17%), Positives = 432/1190 (36%), Gaps = 171/1190 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L++K +NS E I+F R GLF I GPTG+GK+++LDAI LALY Sbjct: 1 MRPSLLKIKGINSFHNEQIINFNR--LVEKGLFGIFGPTGSGKSSILDAITLALYG---- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA-RNQPDGNLQVPRVELARC 119 N+++ + + + EFE+ + R + R + + +G ++ + Sbjct: 55 --NIARDSKEFINTEADRGEVSFEFEILDGSLRKTYRLERGIKRKKNGGIETTVARIIEI 112 Query: 120 ADGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ LAD V + GL+ FTRS++L QG+F+ FL +ER +LE + Sbjct: 113 NGEEVTVLADSVTSVNNEVIRVIGLNAEDFTRSVVLPQGKFSEFLKLTGRERRNMLERIF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G E YG+ I + + K + L+ Q + + ++ L +L EEK L Sbjct: 173 GLEQYGKNIVEKINAERKKYDAKRMDLEGQLKSYEGVNESYYKEVSEKLHLLLVEEKALK 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA------- 289 + + + ELQ E + + + + + + L + A Sbjct: 233 KEIEDLDKEYQQSKKIWELQGEMASYKGMEVLLREKRTEIEEKRKTFILGEKANQLKAYV 292 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 +NL+ ERI ++ AL + +++ +++ L+ + ++ + + ++ Sbjct: 293 QNLKSLEERINQNQLALDALEKELPKISKLLKELEDRYQNALICKEEKFPKFIAKIENCK 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQF-----------SQQTSDREHLRQWQQQLTHAEQKLNA 398 + + E G + + + + Q Q+++ E+ L Sbjct: 353 QAEKIEQQNLILAKEIEGLEKIYHYHCNLSKEKSQELEKSKNKVAQLQREVVVIEKTLEE 412 Query: 399 LAAITLTLTADE-----------------------------VATALAQHAEQRPLRQHLV 429 + A E + Q ++ RQ L Sbjct: 413 IYLEPSHREALEEGYTLNKDRNRLKVEKNEAEKILRDLDKVIEENKVQLKDELEARQQLE 472 Query: 430 ALHGQIVPQQKRLAQLQVA-------------------------------IQNVTQEQTQ 458 ++ ++ L + + Q+ + Sbjct: 473 SVLKSFFEEKTSLENSPLKEEGTIFAKKTELDQKKNQWKALEQNLSQKIDLNKAIQQLVK 532 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL----QAGQPCPLCGSTSH 514 +L E +++Y QQ ++E+R +E +L G+ CP+CGS H Sbjct: 533 TRESLQEQQEKYIVDIQQAESQLEGLKEESRNIEIEYLALKLSEHLHHGEACPVCGSKDH 592 Query: 515 PAVE-----------------------AYQALEPGVNQSRLLALENE------------- 538 P + + ++ L+ E Sbjct: 593 PNPAVGGEVASTADYHHRIQEMTTVTSTLKEKKVDLDIRIAEILKEEELKRSDLAILENL 652 Query: 539 ------------VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 ++KL E L + +A + + E + ++ + ++ Sbjct: 653 MKDVNLEVLLEEIRKLEVEIPALMKEREAYLQGKNKLEEGIERYKEKISLANTRITELST 712 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + D I+ LD + + + L + ++ +I + + ++ ++R + Sbjct: 713 KIEKDGENQDTIRLKLDERSQRIKYLSAIIEKINKDLKIEDIAVEYERIKEMDKERSKKE 772 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE------- 699 + ++E+ + Q +L + ++ ++ Sbjct: 773 KELKDLRKAVEMENRQKETLQNEVNALNLEKVKNQQQLDGNKEKLSLAREEIKMLTDGNN 832 Query: 700 ------TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + EE + + + ++ + V Q + Sbjct: 833 PTAYKTALQNEMQKVEAEEKELKGRVEKGRGIQQSKLEEKAIAENNKVNLVQEYALKVQE 892 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + + F + L ++Q L LE +++ ++ + + + L Sbjct: 893 LEKLSKEKGFSSIEEIQGYLFEDQKLDILEDEITAYDDEVKKVNQNLERIQKAL------ 946 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 D E +++ L E GE++Q LK + + L ++ ++ Sbjct: 947 --DGRAITVDQWETLEKSLTTKKNIQEEKAKEIGEVQQTLKDTNVKLEAMKQLKKEENKI 1004 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEAL 932 T Q++ L+ ++ EG++F ++ L + A++ L + GRY L+ +S Sbjct: 1005 THQLDLLSELSKML---EGNRFVEYVAINQLKYIAREASKWLKDITRGRYALELDSSGN- 1060 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLD 990 + D + R T TLSGGE+FL SL+LALALS + ++ FLDEGFGTLD Sbjct: 1061 -FIMRDDFNGGIRRATNTLSGGETFLTSLSLALALSSHIQLKGSAPLEFFFLDEGFGTLD 1119 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 S+ L+ + AL+ L++ ++G+ISHVE +K R+P+++ V G Sbjct: 1120 SDLLEIVMTALERLHSEKLSVGIISHVEELKNRVPIKLMVFPPEFGGEGT 1169 >UniRef50_C0EE11 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE11_9CLOT Length = 939 Score = 334 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 230/1054 (21%), Positives = 400/1054 (37%), Gaps = 133/1054 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+LSL+L K E ++DF+ +F I+G TGAGKTT+ DA+C ALY ET Sbjct: 1 MKLLSLKLSAFGPFKTEQQLDFS--CLEGADIFLISGDTGAGKTTIFDAVCFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA-RC 119 +++ + +C E+ FE G YR S + + + G+ + Sbjct: 59 GRKNTRTLKSDFAPPSQQCFVELTFESNGRVYRIQRSPEQLKPKRGGDYTTVSHKAELLL 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 DGK + + + K + + GLD G F++ ++L QGQF L K ++ E+ GT Sbjct: 119 PDGKAVTNLKQIKELIETEIIGLDCGNFSKIVMLPQGQFQKLLTEKSSDKTATFREIFGT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQ-ASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 EI+ +++ +FE+ ++ + + L AQ + + + L D K Sbjct: 179 EIFQKLTGKLFERTRTTEQQNQTLLAQNKRLLADILTDSPGLLQQQASDCPDFTKVARLL 238 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ-PARNLRPHWE 297 +Q N L + SR + +LQ A AE E+ + A Q L Sbjct: 239 SEQNSADTNRLKELEGEAARISRLELSLQTACAEAEQLKQDFARREELQLQLDALHAEQP 298 Query: 298 RIAEHSAALAHIRQQIE--EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 RI + + +RQ E + + + K A Q Q + L L + Sbjct: 299 RIEQLTVLCQKLRQAEELLPLEESTLQLIERVEQLDEEHRKTLALRQTQTERLENLLPSY 358 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL 415 Q + + Q + E + + + + A E AL Sbjct: 359 QALEQLRYKEDSLKEQIRELLRAEEQKAGIAAAQKQLDHLDQRIKQASREIEACEQRLAL 418 Query: 416 AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 +Q + L AL + K L+ + A Q + A Sbjct: 419 DLLQQQLGEFKQLDALQTESEQLAKSLSDAEKAYQRACTHFFEEQA-------------- 464 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLAL 535 LQ G+ CP+CGS HP + G+ Q+++ Sbjct: 465 ------------------WTMAENLQEGEKCPVCGSVHHPQKASPPT--EGITQAKVQQY 504 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 + + +L E+ A L+ + + QL D LTQ+ +T+ P Sbjct: 505 QAKRDRLVEQAARLKQKQSQLVNQLAPL---------DRTELTQRHAELTSRFEGGGLPS 555 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 D E+ L +QR E QI ++ + L+ L Sbjct: 556 GDCS---------EQIRLLTAQREEDALACEQLKGQIAATRRGLFDSSPGLIERLNREQG 606 Query: 656 TLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ--SDELPHCEET 713 L A +Q + +Q + EL++L+ R+ + L Q ++ + Sbjct: 607 ALS---------AQIKQTERDYQNCRQELSSLEGRLSEQQSRAAQLRQDAAEAQERFDAA 657 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 + Q + Q S++ +Q+ Q+A + L Sbjct: 658 LSQSGLDQEYPQLKHRVSERPPAEQEIAEHTARFQEAALLLQS-------------LEQR 704 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + + L LE L + L+ + + Q D L+ + V ++Q++ Sbjct: 705 LAGKELPDLESLCRQLDETSSKRVAIQKQ-------------KDALSQKLAVNRLQEQNL 751 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 +++ E + + ++L A G + Sbjct: 752 LHNRRKSEQLEQEYRMTKRLTDLAR-----------------------------GGVKRM 782 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQ---RKASEALEVEVVDTWQADAVRDTR 949 KF D ++ AN +L+R+ G RY + R S+ L++EV D + +R Sbjct: 783 SLEKFVLASYFDEIIAFANLRLSRMSGSRYRMSRITRADSDGLDIEVFDNYTG-RMRHVS 841 Query: 950 TLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 TLSGGE+FL SL+L+L L+D+VS ++ ++ +DEGFG+LDSE L+ A+D L +L Sbjct: 842 TLSGGETFLASLSLSLGLADVVSQHAGGIQLSTMLIDEGFGSLDSEALNLAIDCLTSLQN 901 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 G+ +G+ISHV ++ERI ++ + K N ++ Sbjct: 902 GGRLVGIISHVPELRERIQAKLIISKGNAGSSAQ 935 >UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC54_WEIPA Length = 1068 Score = 334 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 218/1091 (19%), Positives = 406/1091 (37%), Gaps = 78/1091 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L+L N IDF+ F + LF ITG TGAGKTT+ D + AL+ E Sbjct: 1 MRPIKLQLNNFGPY-DHAVIDFSN--FTESKLFLITGDTGAGKTTIFDGMTYALFGEGTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-------NLQVPR 113 +++ + E FE G Y + + + G Sbjct: 58 ERQPEDMRSEFADTVS-ETKVIFWFEHNGHFYEIKRTPTQMLKKKRGAKSDLDLTAHKAT 116 Query: 114 VELARCADG-----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 V L + L DK + L L+ +F + +LL Q +F FL+A+ E Sbjct: 117 VSLLEVDNTLKTPVAALGDKATVVNDQIKELLHLNAEQFRKIILLPQDKFREFLSAQSDE 176 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKL-------QAQASGVTLLTPEQVQSL 221 + +L +L GT I+ Q + + +Q K + + LEK+ Q S + Sbjct: 177 KKVILRQLFGTAIFDQFTNELKQQQKISDSNLEKIVFQRNERLNQISWPQDDIETSAPTA 236 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 L VL K + ++ L ++ + Q+ + + + + K Q L Sbjct: 237 EEKLAVLIQMNKDMRVTITEQGNQLAVARKKLQSVQQEYQDGRRIADLYTQLAKRQQDLQ 296 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 +P + + W R AA I + +++N +L T + I + + Sbjct: 297 EKKTFKPEIDQKTVWLRTLRWGAAQRSIVDKQDQLNAQLNETSENKQQIDKAISVLKQQQ 356 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 + + ++ + + ++ L + Q++L A + + Sbjct: 357 SSLKDAQAKHNEQQENIAEKRVTLQQIQSDL---LPKSRQLTKAQEKLQQAIAAIKSGEQ 413 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 LT +Q+ L +I RL ++ + E R Sbjct: 414 TQQVLTGQCQTAQSDLATQQKHLSDKQKIAVNEI--NLTRLISQIASLNEKSSEYDSRQI 471 Query: 462 ALNEMRQRYKEKTQQLA--------DVKTICEQEARIKTL--EAQRAQLQAGQPCPLCGS 511 L E++ + E Q+A ++ + EQ++ + + + + +LQ G+PC +CG Sbjct: 472 TLKEIKAQATELAGQVATAENNQALQLQKLKEQQSLRRDILIQQLKQELQVGEPCIICGQ 531 Query: 512 ------TSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 H + ++ + E V+K + A ++ ++ ++ Sbjct: 532 IYQGQQHEHEMDSSISYIDLKNAIQAVEETELAVRKATAQLAKVKTDHQTSLTKIDSEQV 591 Query: 566 EAQSLRQDEQALTQQWQ-AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 S + + L +Q + + Q + D E L + + Q Sbjct: 592 WLTSRKNEIAHLYEQLKTDWQQIMGTLDQSFSQLPTAFDNNLLKETGQLALDFMRDTKAQ 651 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 I +Q I+ QQQ++Q + ++ L T+Q + +Q Sbjct: 652 IDVLSQDIVTKQQQVQQIKDKIVENNQTLVL----------QKNTKQDLTEEIEQLTGTS 701 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 L + + +E L + T + E Q +QQ+ Sbjct: 702 EGLLSEM-AYEQKIERLQTEIKQYEGLGTKLREQLLTNENSQQEKQQQLTDVQQKLQQIQ 760 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + L Q + ++ D AF +T L+Q + + T Sbjct: 761 EDLVNEQKILNESIDEGPVKDWTAFSDL------MTHLQQNPDEINQLHDEIMAYQTSIK 814 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 ++ + G +E++Q + + + + + QL Q Q Sbjct: 815 NLSSEVADLQHQIGNENHPDLEKLQGLVNEQQTFVEKQVADYTAKKAQLDQQIKIELSVQ 874 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR--KFAQGLTLDNLVHLANQQ-LTRLH-G 920 L + +D L + + R F L +++ AN+ + L G Sbjct: 875 KLQDEWLAQQAAGKDLFALVQAVDGNNDKRLRLESFILRRFLYDVLEYANRHYIGVLSAG 934 Query: 921 RYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV-- 971 RY R L++++ D +R T TLSGGESF+ +L++AL+++++V Sbjct: 935 RYQFILSDRQAGRANQNGLDIDIYDQD-GGKIRATSTLSGGESFIAALSIALSMAEIVQH 993 Query: 972 -SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 + +ID+LF+DEGFG+LD +TL A++AL + SG+ +G+ISHV +MK++IP Q+ V Sbjct: 994 RAGGAKIDALFIDEGFGSLDEQTLSQAMEALSMVEQSGRLVGIISHVTSMKQQIPQQLAV 1053 Query: 1031 KKINGLGYSKL 1041 KK+ G G SKL Sbjct: 1054 KKL-GNGRSKL 1063 >UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=A0PY82_CLONN Length = 1176 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 217/1201 (18%), Positives = 472/1201 (39%), Gaps = 180/1201 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L++ LNS + E I+F R GLF I GPTG+GK+T+LDAI +ALY + R Sbjct: 1 MKPRVLKISGLNSFEREQVINFNR--LTEKGLFGIFGPTGSGKSTILDAITIALYGKITR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA---RNQPDGNLQVPRVELA 117 + + T + + EFE+ G R + R N + R+ Sbjct: 59 TNKG------FINTTTKDLIVSYEFEIGGAKDRKVYLAERNIKINKNDRYNTKYARLIEK 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 KI+A+ + + GL FTRS++L QG+F+ FL +E+ +LE + Sbjct: 113 NGDKSKIIAEGPTELQNQIHKIIGLTVDDFTRSVVLPQGKFSEFLKLGGREKRNMLERIF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQ-----------------AQASGVTLLTPEQVQ 219 E YGQ + + + + E + LQ Q + L E+++ Sbjct: 173 ALEKYGQSLVEKIKKVRNTNLKERDVLQGELKKYENLTEEDYKAKQQELQLELQNEERLK 232 Query: 220 SLTASLQVLTDEEKQLITAQQ----------QEQQSLN--------------------WL 249 + + + K++ T Q+ + Q+ L ++ Sbjct: 233 NEKKQIDEKYEMYKEVWTLQKELDAFIDKKLKLQEKLEDINLKRESLKRGQNAIKIKPFM 292 Query: 250 TRQDELQQEASRRQQALQQALAEEEKAQPQLA---------ALSLAQPARNLRPH----- 295 + + ++ L++A+ E ++ + LR Sbjct: 293 DEVEATNKNIKDNREKLKEAIDNLEGISEKVKVTEENYIVSEKEKDERIPELRNMERDFL 352 Query: 296 -----WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 + + + +R + + + ++ + I + K + E++ ++ LN Sbjct: 353 LAIDTINKTEKLEMEVNSLRNEYKSIKSKRDKIVKQLKEIDDNKKKLAIEIKDIEERLNE 412 Query: 351 --------------------WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 + + + ++ NN+ + + + + + Sbjct: 413 IKIDPEYREKLQYALQIENDYKKSLNNKKELNNKLQEKEKNLKEVSKEYNGVLSSKNSQD 472 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 + ++L I + + L + E + + + + +I R + L+ I+ Sbjct: 473 NLVKQLEEKNKILKENNPGDNSLLLEKSQELNVIAKKVEEVINEI----NRKSDLEKIIK 528 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 ++ + L E++ + ++L ++ E + ++L G PCP+CG Sbjct: 529 DINDRKNPLTTKLEEVKNDLDKNKKELQELDNKTENIKKNNLASLLASELVEGSPCPVCG 588 Query: 511 STSHPAVEA-YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQ- 568 S H + E ++ L+ ++ L + L ++ I+K+ + E + Sbjct: 589 SIHHTDIAKKIDNNEILKHEENRKKLQQIIEDLNNKMTQLSIEVAGISKEEEHSREELKS 648 Query: 569 -----------SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ 617 L +++++ +++ + ++ +DI+ L + E + ++ L Sbjct: 649 VLESLENVDITELNKEKESKEAKFKELKEKIDKYNSEKNDIESTLQIEREKKSKIDLAES 708 Query: 618 R------------HELQGQIAAHNQQIIQYQQQIEQRQQ-LLLTTLTGYALTLPQEDEEE 664 + EL+G++ N+ + E ++ ++ A + + ++E Sbjct: 709 KLSENVKNEILLIKELKGELEKENKNFHGLSNEYESLKEYFCAEEISLKAKEVLKIEKES 768 Query: 665 SWLATRQQEAQSW-QQRQNELTALQNRIQQLTPILETLPQS-------------DELPHC 710 L +++E +S + L + ++L +L + QS D C Sbjct: 769 ERLKNKEKELRSIVENYDVNKQTLADEDKKLIEVLSQIQQSGIEKSNVIKENKEDIKRLC 828 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQ---------------------SLQK 749 + E ++ ++ + + L++Q + +L++ Sbjct: 829 GDKNPKEYLPKIKKEIKEISDRNTKLKKQLDEEKELKEKISNEKLTLEKAANIFDETLKQ 888 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 Q++ + +L+ + F+D L+DE TL +E +++ ++ ++ + + E L Sbjct: 889 QQSKLEMSLKDNEFNDVLEVKKYLLDEVTLLSMENEINIFDDEVKEVKSNIKRIEEKLQG 948 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 ++ + E++ ++ + + +N +++ + ++ + L ++ Sbjct: 949 NRIEK--------EAWEELTSYKSEIDKHISDNIKKIATLQKIIDDFKEDLKNLMELRKR 1000 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA 928 Q+ ++ L L+ EG+KF +F L + A+++L + RY L+ + Sbjct: 1001 EKQLDHKLSLIRDLMKLV---EGNKFVEFVAMNQLKYIAREASKRLKDITRDRYALEIDS 1057 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGF 986 + D + +RD TLSGGE+FL SL+LAL+LS V ++ FLDEGF Sbjct: 1058 EGN--FAIRDDFNGGQIRDASTLSGGETFLTSLSLALSLSSQVQLKGSAPLEFFFLDEGF 1115 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLESTF 1045 GTLD++ LD + +L+ L++S ++G+ISHVE +K R+PV++ V G G SK+ + Sbjct: 1116 GTLDTDLLDIVMSSLEKLHSSRLSVGIISHVEELKNRVPVKLIVSPAKPGEGGSKVTLEY 1175 Query: 1046 A 1046 + Sbjct: 1176 S 1176 >UniRef50_D2SG48 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SG48_9ACTO Length = 986 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 197/1065 (18%), Positives = 347/1065 (32%), Gaps = 101/1065 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ SL + G +D + A +GLF + GPTGAGKTTLLDA+ ALY P Sbjct: 1 MRLHSLSITAFGPFAGTETVD--VDAVARDGLFLLWGPTGAGKTTLLDAVVYALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-----VE 115 + E + GE + R + G + V+ Sbjct: 59 ARGEEKRLRSDHADAATRTEVACELTLAGERLLVVRRPEQTRPKKRGAGETTEQAKLTVQ 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A + ++ ++ + E GL +F + +LL QG FA FL A+P++RA LL Sbjct: 119 RWDGAAWEPVSTRIDEGSEYLRVRLGLSAEQFCQVVLLPQGDFARFLRAEPEDRARLLRT 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L + + + + ++A L + + + + Sbjct: 179 LFDVGRFARAEDWLAAERRAAEETLRTDRERLGRLLDRVAHAADVAVPEELAPELVGARP 238 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + ++ D A+ A A + E A+ + A A+ R + Sbjct: 239 GASVNAWVAAVRSRAAGDLTAATAAAEAAAAASARLDGELAEARGLADRHARRDRARQEL 298 Query: 296 WE-RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 E + E L R L+ + A + L + + Sbjct: 299 AELTVEEEQLGLLRARADAGRRAEALRDVLESAGRTALAAEAAATALAAARAAWAEVADG 358 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 D E A + + ++L + + AL A + Sbjct: 359 RDADALTARELRDEAAAARALAPEADRAAGLARELGRLGRVVEALTARCEEGVRTAASWP 418 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 QR L A A E+ + A Sbjct: 419 GRVAEAQRRLDAASAAAVRLPGLTAAADAARTALDAAHRAERVAAHLAAARETAEAARTA 478 Query: 475 QQLADVKTICEQEARIKTLEAQRAQ-LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 A + + AR+ + A+ A L G CP+CG+T HP + + Sbjct: 479 WVDAREALVELRAARLDGMAAELAAGLAPGADCPVCGATEHPRPAEHTGPRVSADDEE-- 536 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 R +D ++ + ++ L ++ + Sbjct: 537 --------------RARAVVDTAEERTAAARRTVEERERELAVLRERAGEL--------- 573 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 P + E+ ++ L G + A +++ + + L Sbjct: 574 ------PAAELAACAEQARAERAEVAALAGDVDAARRELADREAGRDAATTRLAADREEL 627 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + D L + T L R+++LT E + E Sbjct: 628 QRRTAERDGRADALTELTA---RLDAARGADTDLPARVRRLTRTAERCEAALSAEAEELR 684 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 + F D AL Sbjct: 685 ARAAADAAREAAARRATAA-----------------------------GFADLVDAADAL 715 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 +D L +LE+ + + R A + T + D AL Q+ Sbjct: 716 LDAGELARLERRLRQHDEARSVAAATLADPELTDLPAR----PDVPALQQRCAQLTAHRE 771 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 + +L + G + + + ++A+ L L+ + + Sbjct: 772 EAVARLEQARRCAGAL-------DALAGEVVSAEVELAERRAWAGRVAGLADLVNGRGAN 824 Query: 894 ----KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEVVDTWQ 941 + + F L+ + +A+++L + GRY + A L ++V D + Sbjct: 825 TLRMRLQSFVLAARLEQVAEVASRRLQEMSGGRYTFLHSDAQARHGARGGLGLDVFDEYT 884 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 R T+TLSGGESF+ SLALAL L+D+V + ++D+LF+DEGFGTLD+ LD + Sbjct: 885 G-TRRPTKTLSGGESFMASLALALGLADVVTAEAGGIQMDTLFVDEGFGTLDALALDAVM 943 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 + LD L G+T+GVISH+E ++ RIP +++V + G S+L Sbjct: 944 NVLDELRRGGRTVGVISHLEELRTRIPTRLEV--VAGRHGSRLAG 986 >UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lactis RepID=SBCC_LACLA Length = 1046 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 202/1096 (18%), Positives = 425/1096 (38%), Gaps = 102/1096 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + + +DF + +F I+G TGAGK+T+ DA+ AL+ T Sbjct: 1 MKPIYLEMNYFGPHENS-VVDF--RLLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + ++ T D F+ YR S + ++ G+ + A+ A Sbjct: 58 DRDAKEMRSQFATAD-DRTSVTFYFKQGNLLYRIERSPEQKLSKKRGSGSTLQKSTAKLA 116 Query: 121 --------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 + +A K+ E L L+ +F + +LL Q F+ FL + ++ + Sbjct: 117 IVDRVKGIEKNNIAINPKNVGEEITRLLHLNAEQFKKIILLPQNDFSRFLKSSTPDKEAI 176 Query: 173 LEELTGTEIYGQISAMVFEQHKSART---ELEKLQAQASGVTLLTPEQVQSLT-ASLQVL 228 L+ + GT I+ S + ++ E ++ Q ++ P +++ L A+ Q Sbjct: 177 LKRIFGTYIFTSFSNEIKAKNSEMNAVYLEYDRKQQNLYESSIWNPIELKELEDAAEQEK 236 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA-ALSLAQ 287 D L + + + + E +++ + A + AL E + + Q Sbjct: 237 LDLVTSLWKDRVARKNEIE--GQTFEQEEKVISIEIAYKSALELENQFKNLNNLENDYQQ 294 Query: 288 PARNLRPHWERIAEHSAALA---HIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE---- 340 +E +E+ L +++ I E+ ++ + +++ +I ++++ + Sbjct: 295 NIIEKSAIFEENSEYLKKLKWAFPLKESIHELEQDIKQSKSVKNNIAGIISEKAKDEILL 354 Query: 341 --LQQQQQSLNTWLQEHDRFRQWNNEP---AGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 L +++ LN + + ++ + Q ++ S E L+ Q + Sbjct: 355 KKLTNEKEDLNKQQENINENKKVAEKIFIQIQLSLQVEKKQSKVEELKLEQADNLTLLES 414 Query: 396 LNA---LAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 A AA ++ D+V + ++ Q + G+++P +++ + I + Sbjct: 415 FKANLGQAAENISTLQDDVISDDYFINKREERNQLELTFRGKLIPTFQKVKHSKDDIVGL 474 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 + + AL+E + EK + + K + I L+++ LQ G+ CP+CG+ Sbjct: 475 ELKLKENTIALSENKDNL-EKAKFAYNEKLKGRRRLMIAQLQSE---LQEGEACPVCGAL 530 Query: 513 SHPAVEAYQAL----------EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 HP E + E +Q + L + K+L + L+ LD + Sbjct: 531 EHPFTETIEESSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLKTELKTSLDLKKIEADE 590 Query: 563 DENEAQSLRQD-EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 E E L + +Q + ++I L+ + + +++ L+ Sbjct: 591 FEKELSILYSEFIADYSQIFPDSFDEVSIDESLLNLTKSLELEEVKNDETKVKLADLESK 650 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + ++ + Q+ ++ + L +T +T + + + R + + + Sbjct: 651 KLELQEKVKDFEYSNQEFNRQIENLNAEITEIGIT----ETSYNLIRKRNRLMEKADLFE 706 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 L+ L ++ + + + S +E +LE E+ S+Q+ + Sbjct: 707 KHLSELMAQLSDIKIKISSQTASLNSFESQEATLLERISANKEKIKEKFSEQEAFTTEF- 765 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 L+ +DD L Q+ Q +E + L Sbjct: 766 --------------QILKEWAYDDD---------------LIQISQKVEQYKADKARLKV 796 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + Q + + + +Q + +KL + + L + + Sbjct: 797 EIKNIQQLIQNKKRPNLALIEEEKKQTNENYVFLQKKLVSAENEVEQAKSILSELKKVIK 856 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL--TRLH 919 QQ + + +T+ S++ + + L+ ++ AN + Sbjct: 857 QQDKDASKKSAITKLYNAISGRA----SEDKLRLETYVVQNYLEKILDYANLHFINQLSN 912 Query: 920 GRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV- 971 RY + R+ L++ + D A R TLSGGE+F+ +L++ALALS++V Sbjct: 913 NRYRFELAGEGNNRRMDHGLDINIYDNETG-AARSADTLSGGETFIAALSIALALSEVVQ 971 Query: 972 --SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 ++ +I++LF+DEGFG+LD ETL A+ AL+ + + +GVISHVE MK I +I Sbjct: 972 NTANGVQIEALFIDEGFGSLDQETLQKAMQALEQI-GENRLVGVISHVEEMKATIGQRII 1030 Query: 1030 VKKINGLGYSKLESTF 1045 + K+ G G S ++S Sbjct: 1031 INKM-GDGRSNIKSVI 1045 >UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8B2_SACEN Length = 984 Score = 332 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 209/1070 (19%), Positives = 395/1070 (36%), Gaps = 115/1070 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + +DF + S+GLF + G TGAGKTTLLDA+ A+Y P Sbjct: 1 MRLHHLEVTAFGPYRDTQSVDF--DTLGSDGLFLLHGDTGAGKTTLLDAVAFAIYGAVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + +E V+G R S R + G Q + L Sbjct: 59 ARGEVKRLRCDTADPEVTTKVALELTVQGHRLRLERSPEYQRPKKRGEGFTTQQAKASLT 118 Query: 118 RC---ADGKILA--DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 DG+ ++ + L G+ +F + ++L QG+FA FL A ER +L Sbjct: 119 WLDAVPDGQPREGLSRIDEVARTMQRLLGMSVEQFFQVVMLPQGEFARFLRADTAEREQL 178 Query: 173 LEELTGTEIYGQISAMVFE----QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 LE+L T+ +G + + + + ++ ++++ + ++ ++ + L Sbjct: 179 LEKLFATQRFGGVEQWFVDRRRERGRELESQTQQVRELLARLSQVSGNEPAEDEDHPSWL 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP 288 + EK+ I + + RQ + + ++ + KA LA L+ + Sbjct: 239 EELEKRGIRELESTRTEHAQRGRQRDAAEAKLAERREFADKVRRVRKANADLAELASNRE 298 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 + + A+ + RQ ++ L+ + ++ ++ + + + Sbjct: 299 QHDAWRAEQDAAQRVLPVLTARQSVDRSAAALEQARSELSAAAAACSEVGDD-----EPI 353 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + R+ A Q QQ +DR L + ++ ++ L A L Sbjct: 354 DRLRTLAGAHREQAGALAQLLPQAEQQEADRRRLAELADRIEADSRREAELTAQQAAL-P 412 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + +A A + E + L L ++ A+L A + E+ A+ + Q Sbjct: 413 ERIAEARRELDESKQSELRLETLVPKLDDLS---AKLTAARELPAAERESTTAS--QAAQ 467 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 R ++ QQ D + L G+PCP+CGS HP + + Sbjct: 468 RAVDEHQQARDRLQDLRERRLAGMAAELAGGLTTGEPCPVCGSAEHPDPRRPVDDQVSAD 527 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE-QALTQQWQAVTAS 587 ++ + + + + QR + + LR+ + +Q A Sbjct: 528 DE---------ERAQAVEQQAQARREKAAAEAQRAQQACERLRERLGEHTEEQLTTELAD 578 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 L L D + + + L ++R Q+ + + L Sbjct: 579 LTAERDALRDKAGRSEQRTQRLADLEASTER----------------LSTQVAEVRTRLA 622 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 T+ ++ DE E+ L + E R+ L L ++++L Sbjct: 623 TSRAEHSSLSSTVDEREARLEEARGEFPGIGARREHLLDLAGKLERLVDA---------- 672 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 + + +L++A S F ++ Sbjct: 673 ----------------------RVACADAETRVEDQRNALREAATAAGFETVESAFAAER 710 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 + LT+L + +E + A+ + A+ PD + L EQ Sbjct: 711 -------SDDRLTELSRALSEVEQRAAGARATLES-----AELSGVDPDAEVGLEEATEQ 758 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 + Q+ + A ++ + Q+ + E+ L ++ Sbjct: 759 A----TVAREAAERAAAMAHRAEQRHRDVAQLAERLRAAWAQLGPAQAEYEELAALADVV 814 Query: 888 GS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVE 935 R + L+++ A ++L R+ GRY R L ++ Sbjct: 815 NGRGQNARKMSLRSYVLAARLEDVAEAATRRLQRMSDGRYSFVHSDAAGARGTRGGLGLD 874 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSE 992 V+D + +R +TLSGGESFL SL+LAL L+D+V+ +D+LF+DEGFGTLD++ Sbjct: 875 VLDDYSG-KIRPAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFIDEGFGTLDAD 933 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 TLD +D LD L G+ +G++SHVE M++RI V+++V+K LE Sbjct: 934 TLDLVMDTLDDLRTGGRVVGLVSHVEEMRQRIAVRLRVRKSRTGSTLVLE 983 >UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHA7_NAKMY Length = 995 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 211/1066 (19%), Positives = 360/1066 (33%), Gaps = 113/1066 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L L G +D + +++GLF I G TGAGKT+LLDA+ AL+ P Sbjct: 1 MRLHELELSAFGPFAGTETVDL--DAVSADGLFLIHGDTGAGKTSLLDAVAYALFGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 N ++ + + G R + G LQ +V L Sbjct: 59 PRNEARRLRCDRAPADVVTQVRLVATLGGHRVEIIRRPEYLRPKARGSGSTLQRGKVSLR 118 Query: 118 RCADGKILA-----DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 A +V + + L G+ +F + +LL QG+FA FL A ER +L Sbjct: 119 WLDRTPAGARPEGLTRVDEVGDAVIDLLGMSADQFFQVVLLPQGEFARFLRADTAERGDL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQV---LT 229 LE L T+ +G+I + + A L + + E + A L Sbjct: 179 LERLFDTQRFGRIEDWFAQTRRVAGQRLRECDDHIREIAARVAEAARVEAAPEPDDRWLA 238 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 +L + +++ RQ E+ R A + + +L L P Sbjct: 239 GLRDRLADRAELAREAAQDAARQREVSAAVLRAATQRAARTARLAELRRRLVDLERRAP- 297 Query: 290 RNLRPHWERIAEHSAA---LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + R+ H+ A +A R Q R A+ R A A + Sbjct: 298 -EIEQDRRRLDAHTRAGPVVAAARAQQAAGEVRADRRQQRVAAGRRLHALAEAAADPDRL 356 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 L + R + + ++ Q L A ++ + + + Sbjct: 357 DLGLLADDPVAIRAAAGVDRDRAGALIPLVGEAQEQQRDQAALAAARRRHHRDENAAVDV 416 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT---QEQTQRNAAL 463 ++ AL + R L +P + I+ E +R Sbjct: 417 --EQRLAALPPRLAELDRRVDLARSARDRLPAAQAELAAAEQIREAAVAVPELAERRRRA 474 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 ++ Q D + Q L AG CP+CGS HP+ A Sbjct: 475 EAAAVAATDRHQVAVDERQALVQRRIDGMAAELAGTLSAGDGCPVCGSVEHPSPARPLAA 534 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + + AT R R E + + E+A + +A Sbjct: 535 PVDAGLIEAAQVREWRAAADRDSATGR-----------RWEAQNELAVAQERACGRLAEA 583 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A + +D RQ R+ + L G A + + + + + ++ Sbjct: 584 AEAQVRTHRATVD-------------RQTRIAANLDALVGLREAAAKSLFEQELRRDELG 630 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 L+ A + D+ + L + + S +QR+ L A + + + Sbjct: 631 TLVALGAAEIASLAARVDQRAARLRSARGAHPSIRQRREYLLARAAALDAVAQACAAVTD 690 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 +D ++A+A L F Sbjct: 691 ADAQD---------------------------------------ERARATVTRLLADFGF 711 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D AA + L + + A L Q A+ + V Sbjct: 712 GDLAEVTAAADLDAPR-----LAERIRTAEVDAAALRAQLADPELAGLDE------SDRV 760 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 V + A ++ + + + +Q A + + A + Q L Sbjct: 761 DVAAAEAAAAADARRAQAAQQQALVLDDRFRQVATAAHRLVAAWRAAAPVRAQERQVAVL 820 Query: 884 NSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EA 931 ++ G R + L + A +L R+ GRY + Sbjct: 821 TEVLLGRGENALGMTLRTYVLAHRLAQVAQAATDRLARMSAGRYSFVHRTDRESRGRAGG 880 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGT 988 L +E++D W VR +TLSGGESFL SLALAL L+D+V+ ++D+LF+DEGFG+ Sbjct: 881 LGLEIMDGWSG-LVRPAKTLSGGESFLASLALALGLADVVAAEAGGRQLDTLFIDEGFGS 939 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 LD + LD + +D L A G+ +GV+SH++ ++ RIP QI+V + Sbjct: 940 LDPDALDLVMATMDELRAGGRVVGVVSHLDELRLRIPRQIRVDRTP 985 >UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PSW5_9SPHI Length = 1012 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 200/1057 (18%), Positives = 422/1057 (39%), Gaps = 70/1057 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + + +IDFT+ GLF I G G+GK+++L+AI ALY T R Sbjct: 1 MLPIYLSIEGLYSYQEKQEIDFTK--LTEAGLFGIFGNVGSGKSSILEAISFALYGNTER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L++ +++ +A +F + E R ++ + R + + R A Sbjct: 59 LNSKENRSYNMLNLKSAAATIIFDF-INFENRRFRFAVHWKRKKK----FDQTSTIERVA 113 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + V + +T L Y F R++++ QGQF FL+ K K+R+++++E+ + Sbjct: 114 YEWLQHNWVPMESADATHITNLTYQNFKRTIIIPQGQFKEFLDLKGKDRSDMMKEIFNLD 173 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + V ++E LQ SG + ++ L QL +A Q Sbjct: 174 KY-DLGPKVSLLQIENNRKIEHLQGALSGFEEINSGTIELKKNGLSEAKVLLDQLRSAYQ 232 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q + S L+ ++ +++ Q + Q L L + Sbjct: 233 QTENSYKVLSEAKANRENLKEKEEQFAQLKLK------QPEILHLEKEMDEYEKLVSLFR 286 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 E + +++ +++ ++Q+ + + ++ Q+ ++ + + Sbjct: 287 EPLDRIQSLQRDQDQLEIKIQNLLQEKQQTSLTLKEKELSFQKVEKDFRKIEELRIKISD 346 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA-LAAITLTLTADEVATALAQHA 419 N R Q S++++ + L + L ++ A +A I L T E ++ Sbjct: 347 LKNLI-QIRTQQSEKSNLQSRLAKGTPILEQTRKEEQAFIADINLQETTLEQLKSVRIDT 405 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ--------RNAALNEMRQRYK 471 + + H ++ + L + ++ +E T + +E+ + + Sbjct: 406 SELMEIDNWYQRHDLLLKNKSALIEKVDLLKLQQEELTNSFTVNGYTVDNWESEITNQLR 465 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 + T + + K L L + CPLCGS HP Q + + Sbjct: 466 QITTDIKALTNQETDLQVQKELGRFADNLHHEEACPLCGSLDHPHP--MQIHDVSIQLGE 523 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L A + E+ + ++ +L Q+ + Q + + ++ ++ Q +Q + + Sbjct: 524 LKAKQTEITERQQQLQSLLSQMTRWSTSYQDKKIQLEAAAKELQQADEQLTELRTRFSWE 583 Query: 592 ------LQPLDDIQPWLDAQDEHERQLRLLSQRHELQ-GQIAAHNQQIIQYQQQIEQRQQ 644 D+ + L + ++ LL + +Q + + + + + Q+ Sbjct: 584 NFRWDDRTLFDEQKTALRQSEIQIKEAELLLKSLRVQLAETQSKAAKFERSLNEFTQQIA 643 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 ++ +T + + + E+ + Q Q + + + + + L + L Sbjct: 644 VIDGLITQHKMQIQAIQIEDYNHNSDQDLLAEIQNAEELIIRTEEQHKTLQAAINQLHTI 703 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQ-QTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + T LEN++ ++ L+ + ++QQ + +++Q + ++ Sbjct: 704 VASVQGKHTEALENYQNTVQKIDKLNQEILAHIEQQHLPGVRAIQLVLQKNLPVIEN--- 760 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 ++ + + + +TL Q E + D+ L Sbjct: 761 ----------------------RKRIHDYKVAYETLQKQITELMQSSAVQDFDEAL---- 794 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 E+ + EL + G + ++L++ D +++ L+ +++ + ++ L Sbjct: 795 -FERTKIELEEKKSAHELQIAHTGALERELQRLEDEFEKKGKLLTAFEKLSHRKDNLRTL 853 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 +++ +G F + + L L +ANQ+ RL L +EA E EV+D Sbjct: 854 DNMF---KGSGFVNYVSSIHLQRLCDIANQRFHRLTKN-QLSLIINEANEFEVIDYLNNG 909 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDAL 1001 R +TLSGG+ F SL LALAL++ + + D F+DEGFGT D+E+++T + L Sbjct: 910 YHRSVKTLSGGQGFQASLCLALALAENIQSLNKADKNFFFIDEGFGTQDAESMNTVFETL 969 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 LN + +G+ISHVE +KERIP+ + V K G Sbjct: 970 QYLNKENRIVGIISHVEELKERIPMSVTVIKDLERGS 1006 >UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG1_9BACT Length = 1151 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 269/1155 (23%), Positives = 470/1155 (40%), Gaps = 120/1155 (10%) Query: 1 MKILSLRLKNLNSL--KGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET 58 MK L L + NL SL +G I+F + +F+I GPTG+GK+TLLDAICLALY+ Sbjct: 1 MKFLQLEILNLASLDKQGGEVINFEEGALGESTIFSIVGPTGSGKSTLLDAICLALYNRA 60 Query: 59 PRLSNVSQSQN-----------------------DLMTRDTAECLAEVEF-EVKGEAYRA 94 PR +N +++TR E +++ F G YRA Sbjct: 61 PRYPRKKGDKNQNIEIFGAADASESNRLAPTDSRNILTRGKKEGYSKLTFLANNGSIYRA 120 Query: 95 FWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLS 154 W R + + + L + + + GLDY +F R++L++ Sbjct: 121 EWHVRFQRVR----YENAKTALYKITRNGEEITEETADWNELPNIIGLDYDQFLRTVLIA 176 Query: 155 QGQFAAFLNAKPKERAELLEELTGTEI-YGQISAMVFEQHKSARTELEKLQA--QASGVT 211 QG FA FL AK ER ELLE+L G E Y I+ + + A ++ A +A Sbjct: 177 QGSFANFLTAKENERYELLEKLIGCEETYTNIATEIKKAKDQATDAYNQMAASVEAVKQN 236 Query: 212 LLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALA 271 LL E++ L + L EK+L + Q + L W D+ ++ + Q ++QA Sbjct: 237 LLNDEELAQLKEEIARLEKAEKELDSQLQAISKDLQWFEENDKQIKQITICQTDMEQAAD 296 Query: 272 EEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIR 331 + Q Q+ L L + + + + ++ + I + ++S + + Sbjct: 297 AIKAMQAQILRLQLHDEVQPAVNLLQEVERQTQSIHEQEENILKAEGNIKSQESAISESE 356 Query: 332 HHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTH 391 A + + Q+ L L R + ++ E L Q + Q Sbjct: 357 KTLASLKEAVSKAQEQLEKALPVIAEARALKAKMEAAMPNLKEKKEALE-LAQKENQTAQ 415 Query: 392 AEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQN 451 + + NA ++ AL E+ ++ ++ Q Q + + A QN Sbjct: 416 KDVEENARNIQKWEAETEKANLALKTTQEEIAKQKQVLHEATQAAEQAWETERNKTAGQN 475 Query: 452 VTQEQTQRNAALNEM-----------------RQRYKEKTQQLADVKTICEQEARIKTL- 493 + + Q+ ++AA ++ +++ K + + L K E +A + L Sbjct: 476 IEELQSHKSAAEKKLQDVQQAIKVVAHLDTATKEKQKNEERILVLGKRNAEIDAALGKLT 535 Query: 494 -----------------------EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG---- 526 E RA L G+PCPLCGST+HP + E Sbjct: 536 IEALTQETLTLRNAYTLMVSEKWEIHRANLTEGKPCPLCGSTTHPYHTDNRQFEEATTEL 595 Query: 527 ------------VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 + Q L E K+ E TL+ Q + +++++ E + ++L Sbjct: 596 SQLLKVKENLLKLQQKEEKVLSGERKQNDGEVQTLQKQQEKLSEEIATYEEDWKALIAQY 655 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 + + + + L I D L ++ ++++ L+Q + + A + Sbjct: 656 PKIPKAEAELKSLLPIYENKAKDASSKLSLFNKIQKEIERLTQLKDKAVKDEAAYESKAS 715 Query: 635 YQQQIEQRQQLLLTTL--TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 Q Q T ALT +++S + Q+W + E+ Q + Q Sbjct: 716 TIQNKAQESTSTCATKLAEQKALTSNLISQQKSKEEAYVKALQAWNSAKKEMEEWQAQYQ 775 Query: 693 Q-------------LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 Q LT + ++ + + + + SQ +T+++ Sbjct: 776 QILNGEEPDAAEQRLTAAKDEATKAADKQNENINKLKAELANSKGSHQTMLSQNKTMKEN 835 Query: 740 DVLAAQSLQKAQAQFDTALQASVFD---------DQQAFLAALMDEQTLTQLEQLKQNLE 790 + + L +++ L+ + ++++ +L+D T+ ++ ++ Sbjct: 836 LLAKEKELDLWIEEYNKQLEEKSIEGKDSEEEGIEERSIEPSLIDRNTIREMLHSAEDWN 895 Query: 791 NQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE--NTTSQGE 848 RR+ A T A +Q L Q + L Q+ +E Sbjct: 896 AIRREKDEKEKAVASTTALYQSAEKAHQQHLEHQPAQTRDALLAIQQEYQERSQRNELIA 955 Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 +++ + +Q + + +TQ+ +DW + IG +G RK AQ TL L+ Sbjct: 956 ANARMQNHQEAVKQLGDKAEALNLVTQEKDDWTAITDAIG-ADGKTLRKIAQCYTLSFLI 1014 Query: 909 HLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 ANQ++ + + RY LQ + +L + V+D +AD +RDT +LSGGE+F+VSL LAL LS Sbjct: 1015 AHANQEIRKFNSRYELQ-QVKHSLGIRVIDHDRADDIRDTTSLSGGETFIVSLGLALGLS 1073 Query: 969 DLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVISHVEAMKERIPVQ 1027 L S ++LF+DEGFGTLD +TL T +D+L L +S GK +GVISH + M ERI Q Sbjct: 1074 ALSSRNISFENLFIDEGFGTLDPDTLATVIDSLAMLQSSQGKKVGVISHTDTMSERITTQ 1133 Query: 1028 IKVKKINGLGYSKLE 1042 I++ K G S +E Sbjct: 1134 IRIIKNGNSGSSHIE 1148 >UniRef50_C0EV37 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV37_9FIRM Length = 1149 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 231/1151 (20%), Positives = 460/1151 (39%), Gaps = 132/1151 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+LK +NS + E IDF E S GLF I GPTG+GK+T+LDA+ LALY + PR Sbjct: 1 MRPLQLKLKGINSYREEQVIDF--ETLTSQGLFGIFGPTGSGKSTILDAMTLALYAKLPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV---KGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 + + + F + + Y A S N ++ L Sbjct: 59 D------TKNFINTNETTASVSFLFSITTDRTRKYLAERSFRYHNNTYTSTVRNTTGRLI 112 Query: 118 --RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + +LADK + L GL F R+++L QGQF+ FL+ K KER +L+ Sbjct: 113 VCDGENETVLADKPTEVTAECIRLLGLTSEDFMRTVVLPQGQFSEFLHLKNKERRIMLQR 172 Query: 176 LTGTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 + E YG ++++ + + L KL + ++ Q+ L + T + + Sbjct: 173 IFHLEKYGIELTSKIGRAKQKQELLLSKLDGEKKNFEEISSVQLSKLQKQEKSDTKQHSR 232 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L + ++S QQE ++A ++ + + L++ + A LRP Sbjct: 233 LSKKLAKLEKSFQKTEELYNTQQELLPLKKAQKEKELLLPSIKEKENNLNITKKANQLRP 292 Query: 295 HWERIAEHSAALAHIRQQIEE-------VNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 +++ +A +++E + + + T + ++ LQ ++Q Sbjct: 293 FSIQVSNAQSAYDQACEKLETVQKETACLQSHFEKTEKEYHAAASAQKEELPLLQAREQV 352 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL-NALAAITLTL 406 L+T D W + + + + L++ Q+Q E+++ + + ++ Sbjct: 353 LHTAQSAADTIHTWEQTKGNAQKELQEILASLAPLKETQEQHFKKERQIHSEIVESEKSI 412 Query: 407 TADEVATALAQHAEQRPLRQH---------------LVALHGQIVPQQKRLAQLQVAIQN 451 AD ++ Q E+ + + L L+ +I + + Q +++N Sbjct: 413 EADRISPERKQLLEKGNVMEETYREKRENYNTNANALSTLNTEIKEEHDAFSIQQKSLKN 472 Query: 452 VTQEQTQRNAALNEMRQRYKEK------TQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + + R +ALNE K++ ++ A K Q+ + L R +L+ G Sbjct: 473 IYTQLCHRRSALNEQHSAAKKELGIIKGKEEQAKQKQKSWQQNHMAQL--LREELEEGAL 530 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSR-----LLALENEVKKLGEEGATLRGQLDAITKQL 560 CP+CG+ V E S + E + + + + Sbjct: 531 CPVCGTPYKEHVSQSHIAENVKTSSETISDVTTKRDTEAFSKNDSETIEKKEAELSEISF 590 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 + E + L + +Q Q + L + +++ L+ DE + + Sbjct: 591 KNLEKGLKKLEKQQQTQQNLIQQLEQELFSLDTHISNLKDALEITDEDTIEDNETDRHFT 650 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 + I+ + I++ + + T L Q+++ E AT +++ + Q Sbjct: 651 INENISQASPVIVEKPIDYFSISKQISTYLQAKGDLRRQKEQCERQAATLKEQHSALQNY 710 Query: 681 QNELTALQ--NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHE-------------- 724 E+ L+ N I+ + LETL Q ++ +E + E + + + Sbjct: 711 AEEILTLRKDNNIENFSNTLETLRQKEQERQQKEITIKEQRQHLEKLRSDIKVLSAQIAG 770 Query: 725 ---QCLALHSQQQTLQQQDVLAAQSL-----------------QKAQAQFDTALQASVFD 764 + +L + + ++ + Q+ Q + +TAL+ + D Sbjct: 771 LENKSSSLTANIENCEKVIAEQTEKFPKTLSINMDFVSEITKNQQRQQEINTALKHTEKD 830 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 QQ+ + LT + ++ E +Q Q L + L + +P+ Sbjct: 831 YQQSLKELQKKNKELTSCQSTSRSSETHLKQVQELYLTQKKELGFSKTDQPELYYMEEKE 890 Query: 825 VEQIQ--------------------------------------QELAQTHQKLRENTTSQ 846 + +++ +ELA Q+++E +S Sbjct: 891 LTKLEKDITSYYDDVRQNEERIRYLQEKLGKKEIEESEWIRQKEELADIKQQIKELDSSI 950 Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 + Q++ + +++ L Q+ + + + L L +G+ F ++ L Sbjct: 951 LLLTHQIETMTKDLAKKEELEQKWETESHKKDMIKELEQLF---KGNAFIEYVAQSKLSY 1007 Query: 907 LVHLANQQLTRLHGR-YLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 + A+ L+++ G Y L+ +++ E + D A+R + TLSGGE F+ SL+LAL Sbjct: 1008 IAREASVILSKISGGNYALE--INDSAEFIIRDNKNGGAIRPSDTLSGGELFITSLSLAL 1065 Query: 966 ALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 ALS + ++ FLDEGFG+LD + LDT +++L+ L + ++IG+ISHVE ++ R Sbjct: 1066 ALSSSIQLNGAAPLEFFFLDEGFGSLDDDLLDTVMNSLERLQSKKRSIGIISHVETIQAR 1125 Query: 1024 IPVQIKVKKIN 1034 +P+++ V + Sbjct: 1126 VPLKLLVTPSD 1136 >UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MH53_BRAFD Length = 1022 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 216/1093 (19%), Positives = 359/1093 (32%), Gaps = 121/1093 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ LRL + G IDF + G+F + GPTG+GK+T+LDAI ALY + Sbjct: 1 MKLHHLRLTGIGPFAGTVSIDF--AALGAGGMFLLEGPTGSGKSTILDAIVYALYGQVAG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 + + T + ++ FE YR R + G + L Sbjct: 59 TATSADRIRSQFAPPTEASVVDLVFETASGLYRVRRQPEFQRPKMRGTGTTKEHAKAVLW 118 Query: 118 RCADGKIL-----------------ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 R +++ A ++ + GL +FT+++LL Q +FA Sbjct: 119 RIGSPQLIDEVIADTAGGGSGVEAIATRIDEVGREIQRAVGLSRDQFTQTVLLPQNEFAR 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL A ER +L+ + GTE Y ++ + E K A+ E++ Q E Sbjct: 179 FLRAGTGERQAVLQRVFGTETYARVEKQLEEMRKQAKREVDAAQQTLGTALARFTEATAL 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + L + L + + A A Sbjct: 239 EGEQVTTLQEHATALRLDALAALAGEHLAAVAARADDARTAATAAGTTEQEARAAADAAT 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 + R L R+ A+ R +++ T + + L A+ + Sbjct: 299 RTRTRIDRRRELDALAARLERERPAVERSRTALQQDETA-RPVVELLRRRDSAASAAAEA 357 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNE-------------PAGWRAQFSQQTSDREHLRQWQQ 387 ++ T EH + E G S+ L + + Sbjct: 358 IETLTALATTTRAEHPQLVDLLEEDAPEEALTAAAEEATGRAGALSELVDLEAGLPERET 417 Query: 388 QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQK--RLAQL 445 L L TA E+ AQ A R A + + R AQ Sbjct: 418 TLAARRDTLATQQKNLEAATA-ELGERPAQRAALVEQRDGARATAAGLGDARAAHRAAQE 476 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + Q + + ++ A+ + + A L+ Sbjct: 477 VERARTAATAQEKTVETARAAAEAALRTAREHAETEAALRRRRFAGIAAELAADLEDETA 536 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CP+CG+ HP Q++A Q QR E Sbjct: 537 CPVCGALEHPHPADPAEDAVSPE-----------------------QVEAAEAQRQRSEQ 573 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQI 625 Q Q+ + + P A+ + +Q L+ QI Sbjct: 574 AQSRAEQAHALARQKLEQLQEEAGEHT-PDSARAAVAQAKQAVDAAAAAETQVAALEEQI 632 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT 685 AH+Q Q E+ + T + + + +A + + S R+ + Sbjct: 633 TAHDQHTQQLTAAKEETALAVERERTAIDEAARLLEADRAKVAAARGDDSSIADRRRAHS 692 Query: 686 ALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQ 745 A L L +++ Sbjct: 693 ARARAATALCQALRRRADAEQRA------------------------------------- 715 Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 A A+ D AL +S A AA++ + T++++L L+ + L AE Sbjct: 716 --ADASAEADRALASSALVTADAARAAVLPAEERTRVQKL---LQARAVDESRLADGLAE 770 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 + + V + L RE ++ A R +T Sbjct: 771 DGIEDTTATDEAREQAQAAVLATTEALTSAQTAAREAAGIAARAEGVAERSAAARTALET 830 Query: 866 LMQQIAQMTQQVEDWGYLNSLI--GSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG- 920 Q+ +++ + L S +GD+ + LD ++ AN +L G Sbjct: 831 ASAQVRAVSESAGVTVRVADLATGRSADGDRVQLSTYVLMWRLDAVIEAANARLALFSGS 890 Query: 921 RYLLQRKASE------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV--- 971 L R L++ V+D D VR TLSGGE+F VSLALAL L+D+V Sbjct: 891 DLELLRDTGARGARKTGLDLLVLDRRT-DQVRVPETLSGGETFFVSLALALGLADIVMGE 949 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 + ++++LF+DEGFG+LD ETL+T + + L SG+ IG++SHV MK +I QI V+ Sbjct: 950 AGGVQMETLFIDEGFGSLDPETLETVVREIGRLAESGRVIGIVSHVGDMKAQIAEQIHVR 1009 Query: 1032 KINGLGYSKLEST 1044 + S L T Sbjct: 1010 R-GAYSRSSLSVT 1021 >UniRef50_B8FW38 SMC domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FW38_DESHD Length = 1165 Score = 328 bits (840), Expect = 9e-88, Method: Composition-based stats. Identities = 234/1182 (19%), Positives = 464/1182 (39%), Gaps = 153/1182 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++K LNS +IDF++ S GLF I GPTG+GK+T+LD + LALY R Sbjct: 1 MRPIKLKIKGLNSFIDTQEIDFSQ--LTSRGLFGIFGPTGSGKSTILDGMTLALYGAVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV---KGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 + M + EF++ + YR R + + ++ L Sbjct: 59 ------GSTNYMNTNCESLQVSYEFQIAEKDTKTYRVDREFRRDKKSGNVRTHSAKILLI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +L ++V++ + + + GL FTR+++L QG+F+ FL + ++R E+LE L Sbjct: 113 TAGGETVLEEQVREVTKKSEEIIGLTLEDFTRTVVLPQGKFSEFLRLEGRDRREMLERLF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 + YG +S+ + + + + L Q + E +++ L L + Q Sbjct: 173 NLQRYGDELSSRLGARIRQELDKANVLAGQLKSYEECSEELLEAKNKELSSLEERLVQFQ 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 ++ + + ELQ+E +R++ + E + +L + + ++P+ Sbjct: 233 AELKKAAEDFHNGKEVWELQEELNRQEVQKTELEKTEAVIKESEIQATLGERSLRVKPYL 292 Query: 297 ERIAEHSAALAHIRQQIEEVNT-------RLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 ++ + +A + Q+ ++ + + A K L+ ++QS Sbjct: 293 DQYEDTLGKIATTQVQVAQLEGDTAALSLQKKEAEAQWEQAGAQKDKVLPALRLREQSAA 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE----HLRQWQQQLTHAEQKLNALAAITLT 405 + E + E + + +RE + + ++ + + Sbjct: 353 DAILEKKKLESLIQEKKSLQENIGRLEQEREEKQGRVHKGEEFIAKVNADIQEKEQKVEA 412 Query: 406 LTADE-----VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR- 459 LT D+ + AL + Q +V+L ++ ++L + Q +QE + Sbjct: 413 LTIDQEFKQKINEALLTFSRWEEAGQQVVSLGSEVKIIDEKLQEAQEKGLKFSQELEAKT 472 Query: 460 ---------------------------NAALNEMRQRYKE-------------------- 472 LN++++++ Sbjct: 473 EILQGFALTLQNLEETCPGDSETLVTLQEKLNQVKEQWARHHEYSAAISRSEAGIRDLLP 532 Query: 473 -----KTQQLADVKTICEQEARIKTLE------AQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + Q+ + I E E+ +K +E A R L G+ CP+CGST H Sbjct: 533 KLDTAQQQKAQLTQKITELESALKKIERENLAYALRVALVEGEACPVCGSTHHQP----D 588 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 V +L ++ +++ E +L ++ +Q++ E+ + R+ AL + + Sbjct: 589 HGNAAVGTEKLEEIQAALREKKEHEQSLYQEMIQAQEQIKTLESTVKDCREKTAALGEAY 648 Query: 582 QAV--TASLNITLQPLDDIQPWLDAQDEHERQL-RLLSQRHELQGQIAAHNQQIIQYQQQ 638 +A A D I + + E E ++ RL ++++L ++ N + + Q Sbjct: 649 KAYDPEAMQKEFETLRDGISRYTKQKGELEAEINRLTQEKNQLAIKLNEQNTIKAETKAQ 708 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATR--QQEAQSWQQRQNELTALQNRIQQLTP 696 +E R + L Y + + L + +QE Q ++ E L++ ++ L Sbjct: 709 LESRGKNLELAKAKYEAYEQELTALRAELNIQDLKQEHQEIAAKEKEKAGLESELKGLRD 768 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT--------------------- 735 L+ E E + + E+ ++ S Q Sbjct: 769 TLKKAQARKEFLSTELSALTESLKESLGTLKEKESSIQDKHTAIKAKVGEVENIETYQKE 828 Query: 736 -------LQQQDVLAAQSLQKAQAQFDT---ALQASVFDDQQAFLAALMDEQTLTQLEQL 785 ++Q A + + Q++ LQ++ Q + D+++L ++ Q Sbjct: 829 VLSQITRIEQIYAQAETRKNETEKQYNECYVRLQSAHTSRQGLAERSQKDKESLDKVLQE 888 Query: 786 KQNLENQRRQAQTLVTQTAETLAQH-----------------QQHRPDDGLALTVTVEQI 828 +Q + ++ L E L + Q + EQ+ Sbjct: 889 EQIENIEEAKSHLLSRDEIEKLKKQVKDYQDSLTQIFGAIGNLQKKLGGRSLTAERWEQL 948 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 Q+ + + S+ EI +K +N +++ L++ A++ +Q+ L L Sbjct: 949 QRHKEEKEILCKGLEESKIEIETHVKTMKENLVKKKDLLKSQAELERQLGLLRDLEKLF- 1007 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLLQRKASEALEVEVVDTWQADAVRD 947 G +F +F L + A ++L + G Y L+ + + + D A RD Sbjct: 1008 --RGKRFVEFVAAHQLKYVSMEAGKRLREITGGNYGLE--VDQNGKFLIRDYKNGGAQRD 1063 Query: 948 TRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALN 1005 TLSGGE+FL SL+LALALS + ++ FLDEGFGTLD L+ +D+L+ L+ Sbjct: 1064 ATTLSGGETFLASLSLALALSAQIQLKGTAPLELFFLDEGFGTLDDNLLEVVMDSLERLH 1123 Query: 1006 ASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLESTFA 1046 ++G+ISHV+++K R+PV++ V GLG SK+ + Sbjct: 1124 HDRLSVGIISHVDSIKNRVPVKLMVTPAQAGLGGSKVAIEVS 1165 >UniRef50_B5HAZ2 SMC domain-containing protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HAZ2_STRPR Length = 1117 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 248/1148 (21%), Positives = 402/1148 (35%), Gaps = 135/1148 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L + +DFT + FA+ GPTG+GK+T+LDA+ ALY R Sbjct: 1 MRPVRLELNGFAGFRAPTVVDFTNADY-----FALVGPTGSGKSTVLDALTFALYGSAYR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + L + C + F+V + Y+ R Q +Q V L + A Sbjct: 56 WGRSNAIAYALAPT-SNRCTVSLTFDVASQRYQVAREVRRVGQQ----IQQKTVSLVKFA 110 Query: 121 DG------------KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 D ++LA ++K+ L GL + F + ++L QG FA FL+A ++ Sbjct: 111 DPTAVVTDADGPQPEVLAGEIKELNAAIEQLLGLSFDDFCQCVVLPQGDFARFLSANARD 170 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 R ++L +L G Y I Q A E+ L Q S TP+ A L L Sbjct: 171 RQQILLKLLGAAHYEGIGKRAGAQAAEAAKEIAVLTDQLSRHADATPQAEADAQARLSAL 230 Query: 229 TDEEKQLIT----AQQQEQQSLNWLTRQDELQQEASRRQ---------QALQQALAEEEK 275 + + ++ + R L+ E +R + ++A+ + Sbjct: 231 GQLAATVDQLVPRVAEAHSRADDAHARVATLRTELARLTPLRTPDGIGELQRRAVEAQTA 290 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 A A A + A L R + T R ++ A Sbjct: 291 AHKARDAADAAAQTLADATKAAQSGPQRAVLNIARDRY----TEKAGLAGRRDAVIAAAQ 346 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 + EL Q ++ L + R+ E G R + Q + L++ QQ L Sbjct: 347 RARQELAQSEERLRALADAVTKARRTAEETRGRRDRVQQAYA---ALQRRQQMLAPVRTP 403 Query: 396 LNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 A + A A A R + A RL + + + + Sbjct: 404 DGASDLTSRAAALARQADAAATQLAAARDRHNQSASALTAAGDGSRLTEAREVLDQLLHV 463 Query: 456 QTQRNAALNEMRQRYKEKTQ----------QLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + A +E+ + Q +L E+ + R QLQ G Sbjct: 464 TSSLTDATSELDDAVEAVAQADSAVTGAQVRLDAATAALEEARTLAGAAQLRPQLQVGHA 523 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CP+C ++ L P ++ L A + E L Q A T+ + + Sbjct: 524 CPVC-------EQSVTILPPPLSDPALAAAQAARDAAVREHRDLLSQRQAATRTVAAKQR 576 Query: 566 EAQSLRQDEQALTQQWQAVTASLNI-TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 A +L Q L ++ + T + D + LD + QL Q+ Q Sbjct: 577 AADTLTQRRTLLDERLGTLLPDRPADTERDCDADRAHLDERAAARDQLVAAEQQARAAVQ 636 Query: 625 IAAHNQQ-----IIQYQQQIEQRQQLLLTTLTGYALTLP----------QEDEEESW-LA 668 A + Q++I++ + L T L A P + ++W A Sbjct: 637 EAEAAHTSATAAVATLQREIDRTRSGLHTQLGALAELDPPAVDTHDVTAAWSDLQAWAQA 696 Query: 669 TRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLA 728 R Q E Q T LE Q+ H T+ ++ Sbjct: 697 QRSTVEDDLSAAQAEAATSHQAHQDATATLEVAEQAHATAHSVHTIAVQQSAAADHAQST 756 Query: 729 LHSQQQTLQ---------------------------------QQDVLAAQSLQKAQAQFD 755 L + LQ Q A ++ + Q Q+ Sbjct: 757 LTDRLSELQTLLDQAPPADALPGLLEECDRLEAAVETATAEASQTREALKAAEAEQQQW- 815 Query: 756 TALQASVFDDQQAFLAALM----------DEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 A A+ + + A A+ D RQA TL Q Sbjct: 816 QARTATAWSELTAARDAVAALKPPSLDTDDLAAAWASLAAWAIRAADDRQADTLRAQADA 875 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQE-----LAQTHQKLRENTTSQGEIRQQLKQDADNR 860 A + + L + + + + Q R + R +++ + Sbjct: 876 HTAHSEADQLLGQLEGLLRDHDLDPQDLGDGSERAAQAPRVVAVAAERARGRVEMIQRSL 935 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG 920 + +I Q + L L+ S +KF ++ LD LV A+Q L RL G Sbjct: 936 ADAAAIQDKIDSARTQQQVAAELARLMRS---NKFPQWLADSALDILVAGASQSLRRLSG 992 Query: 921 -RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTR 976 R+ L E V+D AD+ R RTLSGGE+F SL+LALALSD ++ T+ Sbjct: 993 DRFDLSHHKG---EFYVIDHSDADSQRSVRTLSGGETFQASLSLALALSDQLAGMGGATK 1049 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 ++S+FLDEGFGTLD ++L+ D L+ L + +GVI+HV + ER+PV+ +V + Sbjct: 1050 LESIFLDEGFGTLDPDSLEMVADTLENLAQGERMVGVITHVTGLAERVPVRFQVHRDPHT 1109 Query: 1037 GYSKLEST 1044 E T Sbjct: 1110 SVVTREGT 1117 >UniRef50_Q0SWG0 Exonuclease SbcC n=9 Tax=Clostridium perfringens RepID=Q0SWG0_CLOPS Length = 1172 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 221/1191 (18%), Positives = 451/1191 (37%), Gaps = 168/1191 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L +K LNS + ++F + GLF I GPTG+GK+T+LD I LALY + R Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDK--LTERGLFGIFGPTGSGKSTILDGITLALYGDIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPDGNLQVPRVELARC 119 S ++ + + EF++ G E R + R+ G ++ ++ Sbjct: 59 KS------SNYINTNCDGVYVSYEFQITGNEVKRYRVDREFKRDNKSGGIRNKSSKIIDI 112 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 G +L +K K + GL F R+++L QG+F+ FL + KER +LE L Sbjct: 113 TGGVENVLEEKAKAVTSKCEEIIGLKLDDFMRTVVLPQGKFSEFLKLEGKERRNMLERLF 172 Query: 178 GTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 YG +S+ + + + + ++ L+ Q G ++ E +++ + + K Sbjct: 173 NLRKYGDDLSSKLSLEIRKEKDKMNVLEGQLKGYEGVSEEALKAKEEEINEINLSIKSKE 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + ++ + Q+E ++ + ++ E+ + + ++ A + Sbjct: 233 ELLNKIKKEFEEAEKVWNTQKELYDKRIEEESLVSRSEEIKSFKERVEISNKADKVIVFI 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRAS-------IRHHAAKQSAELQQQQQSLN 349 + E + + E+N +L+ LR + ++ +L+ +++ L Sbjct: 293 NNLEEILKEINKEDLKFNELNKKLEELTNLREENKLKFEEVSKKKEEKLPDLRLKKEKLL 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN------------ 397 +E D Q + + + DR + E++LN Sbjct: 353 ESQKERDILFQIKADGVKLKEACKKIFEDRSKCDTKLNSIEENEKRLNEELKEKEERKEE 412 Query: 398 ------------------------------------ALAAITLTLTADEVATALAQHAEQ 421 L LT D+ + + Sbjct: 413 LFVHEEFKNKINSGLFILSSYEGLDKQFNEIKSEEIELKKYIKNLTEDKEKSEKDLKVKI 472 Query: 422 RPL---RQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK----- 473 L R L +L + + + Q+ + ++ + N + + K K Sbjct: 473 ESLSKTRDKLESLLKKTPGDSNSILEKQIKLGEYREKLNKYKEIKNSLEESLKSKNNFEE 532 Query: 474 ------TQQLADVKTICEQEARIKTLEAQ------RAQLQAGQPCPLCGSTSHP--AVEA 519 Q+L K + E + I ++ + R L G+ CP+CGST H VE Sbjct: 533 KLKAFENQKLLLEKEVRELKEYINKVKVEELAHKLRENLVDGECCPVCGSTHHELNKVEK 592 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD-----------ENEAQ 568 E + L + E ++K+L E + + L+ K+++ E + Sbjct: 593 INLEESNEKTTLLESKEEKLKELILEFSKIEATLEYENKKIEELNISIEEVGEVNEERLK 652 Query: 569 SLRQDEQALTQQWQA---VTASLNITLQPLDDIQPWLDA---------QDEHERQLRLLS 616 SL ++ L ++ + +L L+ L + + L+ ++ R+ + S Sbjct: 653 SLEEEFNTLKEKVEEFNLKKENLEKDLEKLKEEKNNLENIFNKAEVILCEKIVREKEIAS 712 Query: 617 QRHELQGQIAAHNQQIIQYQQQI---------------EQRQQLLLTTLTGYALTLPQED 661 + E+ ++ N ++ + ++ E+ + LL + L + + Sbjct: 713 KIKEVDKELKLKNSELNSIKNELKIEDIKLENELILKKEKEKNLLEKEIRILRTQLEESN 772 Query: 662 EEESWLATRQQEAQSWQQRQNEL------------------------TALQNRIQQLTPI 697 + + L ++ + Q L AL + + Sbjct: 773 KIKDELREKRDALKEDYLSQKSLLDGKVEVYREKERMIKGSLKGLIDEALPIEKIDIKGL 832 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 LE L + + E ++ + ++ + +++ + + + + A Sbjct: 833 LEDLQLEIDYIEKAYLNLSEEKEKLEKAFNNMNQEVAVTKERVNSLNLRKENEEKKVNLA 892 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L+ F ++ + +L+ L + +N + + + + L + Sbjct: 893 LEEEGFKTILEVKEGILSKDEKEKLKTLIEEYDNNLIKVRANIELLIKKLNGKSLTEEEW 952 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 L QE T ++L+E + + + + ++Q+ ++ A+ ++ Sbjct: 953 TRVL--------QEKNNTEKELKEVEELKIRLVTENESIKKKLEEQRDILHIKAKQEHKL 1004 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEV 936 L L +G KF +F L + A+++L + +G Y L+ E + + Sbjct: 1005 ALLSDLEKLF---KGKKFVEFIAANQLKYISIEASKKLKDITNGVYGLE--VDENGKFII 1059 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETL 994 D A RD TLSGGE+FL SLALAL+LS + ++ FLDEGFGTLD L Sbjct: 1060 RDYKNGGAKRDASTLSGGETFLASLALALSLSSQIQLKGTAPLELFFLDEGFGTLDDNLL 1119 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLEST 1044 D +++L+ L+ ++G+ISHVE++K R+PV++ + G+G SK++ Sbjct: 1120 DVVMNSLERLHHERLSVGIISHVESIKNRVPVKLILTPAEAGIGGSKVKIE 1170 >UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria RepID=D1X3K2_9ACTO Length = 1020 Score = 327 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 208/1081 (19%), Positives = 377/1081 (34%), Gaps = 105/1081 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + ++DF + +S GLF + GPTGAGKT++LDA+C ALY P Sbjct: 1 MRLHRLSITAFGPFGATQEVDF--DALSSAGLFLLHGPTGAGKTSVLDAVCFALYGAVPG 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVEL 116 + S ++E V G S + R + G L+ + L Sbjct: 59 ARQSPGASLRSDHAPADLPTEVQLELTVGGRRLEVTRSPAQPRPKKRGDGFTLEKAQSRL 118 Query: 117 ARCA---DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + L+ ++ E L G+ +F + +LL QG FA FL + + R +LL Sbjct: 119 RGHDPERGWQALSKSHQEIGEELTRLIGMSRDQFCQVVLLPQGDFARFLRSDAEARGKLL 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 L T + + + E + + + + + A + Sbjct: 179 GRLFDTRRFAAVEERLAELRRGGEARVTAADERILALAQRIAQAAGPAGAEATPIAARPG 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + A + L W +E R A + E + + AL + L+ Sbjct: 239 EPGLA----EAVLEWAAVARSTARE--RLDIAHRVLTGAEGRQRTARHALDTERELARLQ 292 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 +E +AAL R + + L+ ++ AEL ++ Sbjct: 293 ERYEETVRRAAALEERRPEHDRCQEELERARKADRVAPALELREEAELAHRRADAALDRA 352 Query: 354 EHDRFRQWN----NEPAGWRAQFSQQTSDREHLRQWQQQLTHAE--QKLNALAAITLTLT 407 ++ A +F Q+ E R+ + + + ++ + T Sbjct: 353 RAQLPSDLADAGPDQLAELERRFRQELGGLESARRAEARSAGIDGERERLERESRADDAT 412 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQL----------QVAIQNVTQEQT 457 + LA + +A + + +RLA L + E Sbjct: 413 VRDADAWLAGWDAVHAGLRERIATAQEAATRAERLAGLLAPARRRLEAARRRDALADELL 472 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ-LQAGQPCPLCGSTSHPA 516 L E R+R + + ++ E R++ + A+ A L G PC +CGS HPA Sbjct: 473 AAGETLAEARERALDAHESWLGLR-----ERRLRDIAAELAAGLVDGTPCTVCGSAEHPA 527 Query: 517 V--EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 E ++ ++ L A + L + + A D Sbjct: 528 PATEGDGHVDRATEETALTAHRRAEETRARAEQALGLVRERHATAHAEALDAAAPAAADG 587 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 + + ++ L D L A+ E H L A + + Sbjct: 588 SSAAVADGEAQGAPGPSVDELRDTVDRLAAEHAAE---------HLLAAGTHAAREALDA 638 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 +++ R +L A + + + E + + + A +R+ + Sbjct: 639 AEREHADRLELRQEAERRAAARTSRREALDREQTALHDELAAVRGASGSVAAHADRLTRR 698 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 +L ++ E ++ + Sbjct: 699 VELLAEAAEAVRAERDAARRRKEADDRLSDAAFR-------------------------- 732 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 + FD +A A L+ ++ + +A + + AE A+ + Sbjct: 733 ------AGFDTPEAAAA---TLLDAAAQRDLQHRIDAWQAEAAAVADRRAERDAREAAEQ 783 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 P + Q LRE +++ Q+ + +Q ++ + + Sbjct: 784 PAARPS------AAQGAFETAEWLLREASSALAAADQRCGELTRLSRQAADEVRMLGPVR 837 Query: 875 QQVEDWGYLNSLIGSKEGD-----KFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA 928 Q+ E L L D + + L+ + A +L R+ GRY L Sbjct: 838 QEYERVARLAGLAAGTSADNERKMRLEAYVLAARLEQVAAAATARLQRMSSGRYTLVHSD 897 Query: 929 SE------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 + L + VVD W + RDT TLSGGE+F SLALAL L+D+V + R+D+ Sbjct: 898 ARTGGRRAGLGLHVVDAWTG-SERDTATLSGGETFFASLALALGLADVVTEEAGGVRLDT 956 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 LF+DEGFG+LD +TLD LD LD+L +++G++SHV ++ RIPV+++V K Sbjct: 957 LFIDEGFGSLDDQTLDEVLDVLDSLRERDRSVGIVSHVADLRRRIPVRLEVVKERQGSSV 1016 Query: 1040 K 1040 + Sbjct: 1017 R 1017 >UniRef50_A4ENU5 Exonuclease SbcC, putative n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ENU5_9RHOB Length = 1024 Score = 327 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 226/1078 (20%), Positives = 408/1078 (37%), Gaps = 93/1078 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L+ IDF S GLF I G TG+GK+TL A+ AL+ + Sbjct: 1 MRPVQLTLQAFGPYPNHTVIDFRDA--VSTGLFGIYGQTGSGKSTLFSAMTFALFGVPAK 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S + E F++ G+ Y ++ R + G + A Sbjct: 59 PEQDAPSLRSDHAAPDLQTKVEFIFDLGGKRYLVQRRPDQLRPKTRGTGETRSSHEAYLF 118 Query: 121 D--------------GKILAD-KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D GKI+A+ KV++ + G +F + +LL QG+F +FL AK Sbjct: 119 DATGLSLDEINSGKCGKIIAEKKVREVDTAITGILGYSVEQFRQIVLLPQGRFESFLTAK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 +ER ++L EL ++ + A Q A ++ + +A L E + Sbjct: 179 TRERLQILRELFDVSLFEALMAKFKTQADQAEQQVREERAIYKRHLLA--EGFEDHLDLA 236 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 LT E L +Q+E+ +L + Q+A R + QA K + + L Sbjct: 237 NHLTAEVLHLSDLEQREEAALAKFDIATKELQKAERTAELFSQA----AKYKTLFSNLDR 292 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA---KQSAELQ 342 + + + E ++ + Q++ + + L++ AA + Sbjct: 293 RKAQIEVLSEKVQKVEQASPILDAEQRLRDAHIDLETAQNALVKAAERAAQAQDATRIAD 352 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 + + +E + R + + + + E + ++ A+Q+L Sbjct: 353 KNLKKEEARCEEGETLRCNLEDLTRFEKLLATSAAGEEAAKTARKIQQQAKQELEKAEHQ 412 Query: 403 TLTLTADEVATALA-QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L+ A A A + A R ++ + + + ++ A+ + + + A Sbjct: 413 HAALSGARSAKAEALKLARIRMEQRQQIVIRLTALASHQKAAEAYEQAEEEIRTAEETAA 472 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 L + + +K + + EQ+ + L+ G PCP+CG+ HP A Sbjct: 473 QLQQEYEHASQKVESARQDLAVAEQKLSDEQALHLAQHLEDGAPCPVCGALEHPEPAA-G 531 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 +E +++ ++ G ++ +L + L + S+ ++ Sbjct: 532 TMETADRDAQVQQARAHRERAGLNFQNIKDKLTRLEATLADRKKRLASMELPSESAAA-C 590 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A TA + L+ L DA+ E E L Q Q + A +Q Q + Sbjct: 591 VAKTAIEQLALKELGAEANIADAEAELEAFDAKLVQS---QHGLEALRRQYETSSSQAAE 647 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L L+ L L + QE Q+ + ++E AL Sbjct: 648 ATGTLAGMLSEIPLELRDTSVLAAKSKATAQELQALLKARSEAEALA------------- 694 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 RQ+ E + +++ ++ + +Q A F T L A+ Sbjct: 695 ------------------RQLREDAIKSEKDRESAEKLLAASQDRIQSATHDFQTRLSAA 736 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + EQ L L+ L ++ +Q Sbjct: 737 G-----------LTEQALADLKPAMSTLVVDKQTITAFWQDHKSAQDAAEQTALAVAGLS 785 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + +++ L R+ T + + ++ Q Q +Q+I + Sbjct: 786 QPDLAALREVLTAALDHSRQVTEGRVSSQGRIAQLKKLTTNLQETIQKIEEFETATGSLR 845 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK------ASEAL 932 L++L+ + + +A G D ++ AN +L + GRY L R+ S L Sbjct: 846 ELSALLNGQNEQRLTLETYAIGAMFDQVLEAANLRLGPMTSGRYRLDREIGGSGRGSRGL 905 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 ++V D + R TLSGGESF+ +LALAL L+D V S K R+D++F+DEGFG+L Sbjct: 906 GIQVFDFHTGKS-RAANTLSGGESFIAALALALGLADTVESSSGKVRLDTIFIDEGFGSL 964 Query: 990 DSE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 D+E TLD L L+AL + +++G+ISHV ++E IP V+K GLG S +E Sbjct: 965 DTENGSGTLDQVLQVLNALVSQNRSVGLISHVPLVQEMIPGGFHVRK--GLGGSWVEK 1020 >UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJS0_THEYD Length = 1031 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 213/1064 (20%), Positives = 444/1064 (41%), Gaps = 77/1064 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M +SL + LNS E KIDFT+ F LF I G TG GK+T+LDAI L++Y +TPR Sbjct: 1 MLPISLIFEGLNSYAREVKIDFTK--FYRTKLFGIFGITGGGKSTILDAIILSIYGKTPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L++ + + E FE+ ++ ++ + ++ L R Sbjct: 59 LASTK--IKEAINPQRGVINIEFTFEIGRRRFKIQRGIDQ---------RETQIRLYRLE 107 Query: 121 DGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + K +A+K + E + GL Y F + ++L Q QFA L +P +RAEL+ L Sbjct: 108 EDKEIPIAEKSNEFNEKIKEIIGLSYEEFCKVVILPQNQFAELLRLEPAKRAELIGNLFD 167 Query: 179 TEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 +G+ + + E+ + ++ Q + + ++ ++ E + + + +T +L Sbjct: 168 LNYFGEPLYSKFSEKFLKLESTIQDKQRRLNELSEISQESIINKEREVDEITKALGELRQ 227 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 Q++ + LN L +L + ++ LQ+ ++ + + + + + +E Sbjct: 228 KQKELMEKLNILRNFKQLSDKKKELERELQKMETKKIEIESLKNKIQMDDELAPYKKSFE 287 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + ++ +Q+ EE+ L+ + R + Q+ + L ++E ++ Sbjct: 288 ELKNLKKSIEANKQKHEELARELKIIESRFEKQREQKEEFEKFFSQRNEELIGKIKESEQ 347 Query: 358 FRQWNNEPAGWRAQFSQQTSDR-----------EHLRQWQQQLTHAEQKLNALAAI---- 402 + E + Q+ + E L++ + T + + A+ Sbjct: 348 LVELEQEIKSLLDKEQQRAKEMKKLNLEFKEVDEQLKRIDTETTQLMKNIEKNKALFENT 407 Query: 403 ----TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 D + AL + E + L++ + L + ++K+ + IQ +++ Sbjct: 408 QLNDEELRLYDLLPNALLKLNEIKNLKEEIEILIKKTERERKKWEESFAQIQKEFRDRFN 467 Query: 459 RNAA----LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ-LQAGQPCPLCGSTS 513 A ++ + E+ ++L D E ++K L ++ L G+PCP+CGST Sbjct: 468 LTIATYEEIDSVIVAKTEEIKELKDKLLRELDEFKVKNLAFTLSKTLLEGKPCPVCGSTE 527 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 HP ++ + E ++K++ E + I +++ ++ Sbjct: 528 HPKPAE------SIDDKNIALREEKLKEVDENIFKIEDVKAKIKPLMEKVFISKTNIETY 581 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + ++ + +T + L + ++ W +A+ E+ + E+ ++ N + Sbjct: 582 AKEISDKKSKLTKA-EHELSQIISVKLWANAEQLFEQIKNKKKKNDEVMKELNYLNSEFH 640 Query: 634 Q---YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 + + + Q++ + T + L + ++ + E + T + Sbjct: 641 EKMKLKNDVTQKRVEIFTKIQQTHKELEEIKKDTKEKKDKLNEKTGGKTSYEIKTEAEKE 700 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 ++ + L + ++ L ++ E +Q+ ++ L A+ ++ Sbjct: 701 LEIIKKRSLQLENELKDLDIKKQNTLIAMERITEGIKKDEQKQKEIKASLDLKAKEMR-- 758 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 D A ++DE+T L+ + E + +A+ + + L + Sbjct: 759 -------------IDVSELAAIILDEETKKSLKNTVEEFEKEFNKAKGALDNILKNLEEI 805 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 +++ ++ +A+T+ K+ ++ G +++Q++++ D +++Q L ++I Sbjct: 806 -----PIKAIQPDELQETEKFIAETNDKIAQSNEKLGTLKEQIRKEKDMLKEKQLLSKEI 860 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 M + E+ L +L KE KF + L +V L N L L GR + Sbjct: 861 TLMENEFENVKLLKNLTYGKEMVKFFSWQL---LKEIVKLTNGILRTLIGR-RFSINVNP 916 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT--RIDSLFLDEGFGT 988 LE V D R TLSGGE+F+VS ALALALS + K I F+DEGF + Sbjct: 917 NLEFTVSDLLYNKE-RSVNTLSGGETFIVSFALALALSSYIQSKRMRAIQFFFIDEGFSS 975 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 LD E LD+ L+ L + + +G+ISH+E +K+ IP I +K+ Sbjct: 976 LDRELLDSVCAVLNELKSQDRLVGLISHIEELKQVIPNSINIKR 1019 >UniRef50_C9L5R9 Putative exonuclease SbcC n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R9_RUMHA Length = 1076 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 228/1095 (20%), Positives = 449/1095 (41%), Gaps = 77/1095 (7%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 +++K LNS +IDF E S GLF I GPTG+GKT++LD + LALY T R Sbjct: 1 MKMKGLNSFLEVQEIDF--EKLTSQGLFGIFGPTGSGKTSILDGMTLALYGTTSR----- 53 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGK-- 123 + + + +T + E F ++ + + + DG ++ + A + + Sbjct: 54 -NSTNYINVNTDKAFVEYIFSIQEKQQHKYLVARSFKRTKDGGIRSDSAKFADITEEEPV 112 Query: 124 ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYG 183 ILAD+V + GL F R+++L QG+F+ FL + ER ++LE L E YG Sbjct: 113 ILADRVGTVNAKCQEVLGLSKDDFFRTVVLPQGKFSEFLKLEGMERNKILERLFHLEKYG 172 Query: 184 -QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 +++ +V EQ + ++ + S +T E +Q+L L + A ++ Sbjct: 173 ERLAFLVKEQAGQWEGKRKEQEGALSRYEAVTTEAIQALEQKETELEKNLAKKEEALKKM 232 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 +++L Q L +E + E++ L A+ A L P++ E Sbjct: 233 RKNLEDSKGQILLWEEYDAVCEKENSLAKEQDDITALQENLKKAEIANGLFPYFSDYQES 292 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 A Q+ + + K Q Q+ L + Sbjct: 293 IAKEKSYTQKAAALTELWTEKRKSFTFTQLELQKAEERKQAQKPVLEQRRNNLLEAVKLA 352 Query: 363 NEPAGWRAQFSQQTSDREHLRQ----WQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 E + +F Q +RE + + Q+++ Q ++A + + V T ++ Sbjct: 353 EERDIQKNRFHTQKKNREEITKKLLDAQEKMKALLQDIDARKLQKTAMQQEIVKTTISAE 412 Query: 419 AEQ-----------------------RPLRQHLVALHGQIVPQQKRLAQLQVA------- 448 +Q L++ + + + +Q+ L +L+ Sbjct: 413 IQQMIMNGFQKTERLNQQKCRRTAIEEGLKEDIKNIRNKEREKQELLQRLKEKEAEKAEY 472 Query: 449 IQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL 508 +QN + Q ++ A L+ ++ + ++ K EQ A L+ G PCP+ Sbjct: 473 LQNAWENQKKKCAKLSAEIEKAQVNQIEIQGKKETQEQLYMENMAAILAASLEDGMPCPV 532 Query: 509 CGSTSHPAVEAY-QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 CGS H + Q + Q + ALE E++ + E A LR QL + + + Sbjct: 533 CGSIHHEKPQTLRQKEDIQALQKQKEALEEEIQAIYETLAGLRTQLQQEQQITFENLPIS 592 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQD----EHERQLRLLSQRHELQG 623 L ++ Q L + +N + + + +A++ + E +L + Q ++ Sbjct: 593 PKLTEELQKLQTEAAKKETEINGLQKRYTERKQEWEAENKEILQKENELEIQKQTAMVED 652 Query: 624 QIAAHN--QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ-QR 680 A+ Q+ + ++++++ + L L + + L +Q EA Q Q Sbjct: 653 FQIAYEALQEKNRKREELQKLLETLEQKLDARIKNREKGEGIIQELKAQQTEASFLQKQA 712 Query: 681 QNELTALQNRI-------QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ 733 + +L ++ +I + + L+ S + + Q + + Q Sbjct: 713 EEKLLEIKEKILEKAQTEENILEKLKETEASIAALEKQYETSKALFEQASTEEQEVARQL 772 Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 ++ + + + A +++ ++ +EQ L+Q+ + +N + ++ Sbjct: 773 AAVKALAEASQKDSIQKYALLQEKMKSCSVTEETYIAKYHTEEQKLSQMREKLENFQKEK 832 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL 853 + Q + Q + L + + + L +++E+ + E S G +R++L Sbjct: 833 IRVQEQLLQIKKKLKSKRMEQGEFAL--------LEKEVQTLETETTEENKSFGAVRKEL 884 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQ 913 +Q ++++ + + ++ +++ L L G +F ++ L+++ A+ Sbjct: 885 EQMKTAWKEKENVCVLLEKIHHKLDILSELEGLF---RGKRFVEYISRYYLEHIAREADT 941 Query: 914 QLTRLHGR-YLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS 972 L + G Y L+ + A + D A R TLSGGE+F+ SLALALALS + Sbjct: 942 GLKEMTGNTYGLEIDENTA--FIIRDYKNGGASRPASTLSGGETFMASLALALALSSQIQ 999 Query: 973 --HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 ++ FLDEGFGTLD L+ ++AL+ + +++GVI+HVE +K RIPV + + Sbjct: 1000 MKGAAPLELFFLDEGFGTLDENCLEVVMEALEKIRNKKRSVGVITHVEEIKNRIPVHLLI 1059 Query: 1031 KKIN-GLGYSKLEST 1044 + G G SK+ Sbjct: 1060 EPAKAGEGGSKISIE 1074 >UniRef50_B2GF12 Exonuclease SbcC n=3 Tax=Lactobacillus fermentum RepID=B2GF12_LACF3 Length = 1034 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 221/1079 (20%), Positives = 412/1079 (38%), Gaps = 90/1079 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + + IDFTR F ++ L+ I G TG+GKTT+ DA+C+ALY Sbjct: 1 MKPLKLTMHYFGPYED-TTIDFTR--FDASPLYLIAGDTGSGKTTIFDAMCVALYGNASN 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 ++ FE KG Y+ + + G + P+V L Sbjct: 58 ERRSAEMFRSDFATPKQVTEVTFLFEHKGVTYQVYRRPRQVLTMTRGKGEKQYDPKVSLV 117 Query: 118 RC--ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A+ K+ + + L G++ +F + ++L QG+ FL A K + E+L Sbjct: 118 YPVGAENPRELTKITEVNQFVQDLLGVNASQFRQLIILPQGEVQRFLMADSKTKEEILTT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS---------LQ 226 L T++Y + E+ KS R + + + +Q + L L Sbjct: 178 LFQTQLYTNWVTKLDERAKSMRDQTQDITSQLKVLMGQVDGVSDQLELDQWQVAVGDLLT 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL---QQALAEEEKAQPQLAAL 283 E + + Q++ + L Q ++ + AL + E ++ PQ+ L Sbjct: 238 EKKAELRAVTEQVTTAQKAADQLQAQLTAERRLAEDHAALVSCETQQLELKERAPQIKRL 297 Query: 284 SLAQP----ARNLRPHWERIAEHSAALAHIRQQ---IEEVNTRLQSTMALRASIRHHAAK 336 + A+ + + + LA + +Q E+ ++ + + + Sbjct: 298 ADENEETAWAQQHQTAYHEWQAGTTKLADLTKQQAACEQKQAAVKVRVQELTQVAERLKE 357 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 Q +Q++Q+ + ++ F + + Q + LT + +L Sbjct: 358 QEPAVQERQRQVANIREKLPLFEEVAALSKRLEKERRAQVEQERTVSDQTSALTKLQAEL 417 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + + A Q+ +R + Q K LA + A++++ + Sbjct: 418 DRVDQELQAAPDLTQAAVTIATRVQQVVRWQQAVTA--LGEQAKELANQEQALRDLNAQL 475 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + + KEK ++ + ++L+ G+ CP+CGST+HP Sbjct: 476 AEAKKTAQAAQADLKEK-----------KKARLAAMIATLASELEEGEACPICGSTTHPH 524 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 V V + L + +V K ATL + QL++ + + + Sbjct: 525 VATAVQTGQEVTEVTLDTAQAKVTKAETTLATLTTRQANQDSQLEKG---RATFQDELAT 581 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 L Q + L + + LD D E Q + Q Q++ Q Sbjct: 582 LCQAVASPAGDLEAVTAAVAEAVAALD-HDRQELQNAQAKETENQQRQVSLTKQI----- 635 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 Q + + Q L + L + Q + + + Q + L+ Q L Sbjct: 636 QAGQAKYQELQAAVNEGRLNVNQT--QTELVNKQGQLPAELPDLASAERWLKEEEQALAD 693 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 Q+ + +T + + + + + + Q+ +L + QA + Sbjct: 694 FASQQTQNQDALSRAQTQLTQLTTTSQQLADSAKATAAEVDQRKRELTAALAERQAAW-- 751 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 + F AL + +L ++ + + R++ +L Q + Q Sbjct: 752 ----------EVFERAL---ARVPELAARQREVNDYRQRLASLADQRQRLVEQIAGRPKP 798 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 D VE+ +L + KL + + E L + + +QQ + + +Q Sbjct: 799 D-------VEKTAGQLKKAQVKLDQLKGAVIEQGNALTRIKEIKQQVEKKAAKQGDTERQ 851 Query: 877 VEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQ-------- 925 + + L +L+ + G + +++ Q ++ +ANQ L +L HGRY + Sbjct: 852 LRELSSLCALLKGQGGTQLGLQRYVQRHYFTEVLAVANQWLAKLTHGRYQMHLDGEADFK 911 Query: 926 -RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLF 981 R+ LE+ D + A R ++LSGGESFL +LALALAL ++V I++LF Sbjct: 912 GRQNKNGLEIYADDDY-AGKARKVQSLSGGESFLTALALALALGEVVQRHHGGVEIEALF 970 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 +DEGFG+LD + L LD L +L + IG+ISHV ++E+IP Q++V NG K Sbjct: 971 VDEGFGSLDQDALGEVLDTLQSL-DGNRMIGIISHVTELEEQIPDQLQVIAENGRSKVK 1028 >UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS5_9SPHI Length = 1029 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 200/1055 (18%), Positives = 406/1055 (38%), Gaps = 50/1055 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + +IDF + + +F I G G+GKT+LL+AI ALY ET R Sbjct: 1 MIPIKLSIQGLYSYQDLQEIDFQQ--LIGSSVFGIFGKVGSGKTSLLEAISFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK--GEAYRAFWSQNR-ARNQPDGNLQVPRVELA 117 L++ Q ++M + + + +F+ + Y+ + R + + R+ + Sbjct: 59 LNSRDNRQYNMMNLKSKHLIIDFQFQAGPEQQLYKFVYEAKRHPKKHHEIGPGERRMFIR 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + + + + ++ +D L+ + GLDY F R++++ Q QF FL P ER +++ +L Sbjct: 119 QGDEWQPIGNEKEDIAVLSKQILGLDYDNFKRTIIIPQNQFREFLELSPTERTKMMNQLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + Y ++A V + K+ +L +L+ S + +TPE ++ + V+++ + Sbjct: 179 KLDQY-DLAARVSKLSKANDDQLAELRGLLSPLEAVTPETIEQAKTDITVISESLSRKEA 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPHW 296 + L + Q QQ L Q L Q + AL++ + + + Sbjct: 238 EINDLSPAEKRLLENQQRSQTLVSTQQELTQVLNRAPLYQQREQALAIYETCLLVFQADF 297 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIR------HHAAKQSAELQQQQQSLNT 350 + + ++ + +Q + +L +R A + ELQQ+ L+T Sbjct: 298 ANLDKLNSRKTRLIEQEQAAQRQLLFVTKRLVGLRSLYEAAKQAYETRDELQQKIDELDT 357 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTH----AEQKLNALAAITLTL 406 Q + + SQ + + + + + + + Sbjct: 358 VQQIRTLQQTIGQQTRNRDTLASQLHHQATLIERHKATRAKHRLILDNGIGRTSDLERLY 417 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 TA +Q Q V + + + + K+ + + L + Sbjct: 418 KVKNWFTAYKPLKKQADDLQLAVDNYDRAIEKLKQQKNDAL-LGFPPDWTDLTLKTLPDA 476 Query: 467 RQRYKEKTQQLADVKTICEQEARIK-TLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + EK +++ + + ++ ++ L L GQPCPLCGST HP ++ E Sbjct: 477 IEEALEKFKEVREDREDKHRKLLVQDELRKYADALNEGQPCPLCGSTHHPN--RHKGDEE 534 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 ++ A +V + E + L+ + +T +L+ + + + L Q+ + +Q Sbjct: 535 SIDVKGSEAGLQKVIQRIEVTSKLQLAIKELTTKLRSEHDNGKRLMQERTEIVRQLTEHE 594 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + + ++A + + + + + + + ++ Sbjct: 595 DNFMWPEFSKEQEGEVINAIQKESDAQKQILDAQKAIQDLEKLIGEAEAAHNDLNKKVVD 654 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + G + L E + + Q + +L +Q + + Sbjct: 655 AGNAIAGLSGQLKTAAESLEHFRLEEVKNWGLDQIADLRESLTKTYRQAKIHFDDTAKQQ 714 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E+ E +Q H Q + ++Q+ L+ + + Q LQ+++ Sbjct: 715 GEAEKEQATAEEQIQQFHNQLAEIVAEQEGLEVTIAQNLANQNLTRKQVKQILQSNLNIG 774 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 Q+ Q +R Q V LA+ V + Sbjct: 775 QE---------------RQQINEYNEKRSSLQGQVDTLQTELAEQ--------PFDPVEL 811 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 +QQ+LA + G L QQ+ ++ ++ + +D ++ Sbjct: 812 ATVQQQLATLQTEKDALNKEHGRATSVLAALESQWQQKLEHQKRHDELDLRKQDLKKMDE 871 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAV 945 + F + + L NL AN++ +L L+ + + V D + V Sbjct: 872 MF---RAQGFVNYVSSVYLKNLCESANERFFKLTNN-QLRLELDDKNNFLVRDFLNSGEV 927 Query: 946 RDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 R +TLSGG++F +L+LALALSD + H K + + FLDEGFGTLD ++L T L A Sbjct: 928 RSVKTLSGGQTFQAALSLALALSDNIQHLTKAKQNLFFLDEGFGTLDKDSLQTVFKTLKA 987 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L A + +G+ISHVE +++ + I+ + Sbjct: 988 LRAENRVVGIISHVEELQQEVEHFIRAESTENGSR 1022 >UniRef50_C4L7Q2 SMC domain protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7Q2_TOLAT Length = 1253 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 305/1251 (24%), Positives = 474/1251 (37%), Gaps = 211/1251 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R +NL SL + IDF +GLFAITG TGAGK+T+LDAICLALY + R Sbjct: 1 MKILAVRGENLASLSHPFNIDFIHGRLGDSGLFAITGNTGAGKSTILDAICLALYDQIAR 60 Query: 61 LSNVSQSQNDL-----------------MTRDTAECLAEVEFEVK-GEAYRAFWSQNRAR 102 + ++ ++ ++R AEV+F + G+ Y A WS RAR Sbjct: 61 FPSNKKNMAEIGRADDSERLKANDVRLILSRGAVSGYAEVDFTARDGQHYCARWSVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKI-LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAF 161 N+PDG Q L + ++G I A +D GL++ +F R+++L QG FAAF Sbjct: 121 NRPDGKCQKQERSLRQLSEGGITYAGGQRDVQSQIDEKIGLNWEQFRRAVILPQGDFAAF 180 Query: 162 LNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKL------------------ 203 L A ER+ LLE +TGTE Y +S +E+ K+ R +L L Sbjct: 181 LKASTDERSALLERMTGTEHYSALSMAAYERAKTERQQLAVLEEKLGDQPQFSQEDRDNI 240 Query: 204 ---------------------------QAQASGVTLLTPEQVQSLTASLQVLTDEE--KQ 234 Q + + T E L + + +E ++ Sbjct: 241 QSQLQALSLQQKQKAQQLTLLQEWQEMQRRLQELQSATEESRLQLQTATEEWHAQEQSRR 300 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN--- 291 + A ++ Q + + D E + + LQQ + K L Sbjct: 301 RLAALEKVQVARAEHEQLDRTVLELQQISETLQQRQLQLTKHLELEQPLQQQYQQALQQR 360 Query: 292 ---------LRPHWERIAEHSAALAH-------------------------------IRQ 311 L+ + E +L Q Sbjct: 361 DEGDAEFSVLQREIRQARELDNSLKERQQQLQLAAQQLLVLQTETTQQHHLQQQQQHALQ 420 Query: 312 QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQ 371 Q++ + L+ + + A +Q L+ Q L L+ + +Q + Sbjct: 421 QLQHQRSELKIWLEENHHWQRQARQQQPLLKAMQDFLGEKLRWQQQNQQIAIYQQQLKEL 480 Query: 372 FSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVAL 431 Q + + H + Q L +Q+L T ++ + HL + Sbjct: 481 ERAQVAVQHHFQHQQDALQTIKQRLQQEGDAQEWQTLQQLYNRWQEVQGIAERCVHLKGV 540 Query: 432 HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK 491 Q V ++ +L Q Q Q + + Q +V +Q Sbjct: 541 AEQAVQGNRQRTELLQRQQQFRQSLQQIAHRRQSLLPELETSQAQWQEVNQTLKQAQLHS 600 Query: 492 TLEAQRAQLQAGQPCPLCGSTSHP---------------AVEAYQALEPGVNQSRLLALE 536 L+ R L +PCPLCGS HP + + + Q L+ Sbjct: 601 QLQDYRVYLSEDEPCPLCGSVHHPYRHETISDSLLLQLERQQLFLQQQQERGQVENAQLQ 660 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW------------QAV 584 ++ L QL + L+ E + QS+RQD L W Q Sbjct: 661 EAEQQTILAEKELVRQLTHLDNALRALEQQWQSMRQDHTVLIPAWPGDESLWLPLLTQLA 720 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 TLQ + Q + + + ERQ +LL Q+ +L Q + + ++ + Q+ ++Q Sbjct: 721 QVQHQQTLQAGELHQQYERNRAQFERQQQLLLQQEQLTQQAQKYERDLMALRSQVGEQQG 780 Query: 645 LLLTTLTGYALTLPQEDEEES----------------------WLATRQQEAQSWQQRQN 682 + L + + E WL Q+ Q + Q + Sbjct: 781 AFELLQQQQSALLLRLQQSEQSLDEQLAPLEWRSALTLQQGAVWLDGWQKCCQEYLQTEQ 840 Query: 683 ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT------- 735 + + QQL + + + + ++ L Q+Q+ Sbjct: 841 HWILSEQQYQQLQAEISAQNSRLLTLQEQLQLRQKEQERIQSDFQQLLQQRQSCLNGQPA 900 Query: 736 ----------------------------------LQQQDVLAAQSLQKAQAQFDTAL--- 758 LQ Q L++ QAQ L Sbjct: 901 EPLEQQWIQRVQQNRELAEQQQQQLQLWQEQRIALQSQVSSQQHHLEQLQAQHRALLLST 960 Query: 759 ---QASVFDDQQAFLAALMDEQT-----LTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 Q + ++ L+ QL L + L + + Q Q A + Sbjct: 961 MQQQQKLGINEYEIRQLLLVPIEQVRLQREQLAHLDEQLTQVKTRLQEREQQMALQQKRC 1020 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + + + + Q+ + L+E I++ Q + Q L Q Sbjct: 1021 ETLQHIQPQWIGLDFNQLTALQQEMTLNLQELDQQLFNIKRLQMQAEEAAVTQIQLQQVY 1080 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 + + W L+ LIGS G KFR FAQ LTL+ L+ LAN L L RY LQR Sbjct: 1081 QAQQEISDRWQQLSDLIGSANGAKFRTFAQSLTLEQLLGLANHHLAELAPRYQLQRVPGT 1140 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 L ++V+D D +R +LSGGESFLVSLALAL LS L SH TRI+SLF+DEGFGTLD Sbjct: 1141 DLALQVIDRDMGDDIRAVESLSGGESFLVSLALALGLSSLSSHDTRIESLFIDEGFGTLD 1200 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 E+LDTA+ +LDAL A+G+ +GVISHV+ + ERI VQIKV+ + G G S++ Sbjct: 1201 PESLDTAIASLDALQAAGRQVGVISHVQTLVERIGVQIKVQSL-GGGESRI 1250 >UniRef50_C9BXS9 Exonuclease SbcC n=12 Tax=Enterococcus faecium RepID=C9BXS9_ENTFC Length = 1042 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 219/1080 (20%), Positives = 440/1080 (40%), Gaps = 82/1080 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+LKN E +DF+R LF I+G TGAGKTT+ D I AL+ ET Sbjct: 1 MKPKKLQLKNFGPFINET-VDFSR--LTEAPLFLISGKTGAGKTTIFDGITFALFGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRVELAR 118 + L E FE + +Y + A+ + +G + Sbjct: 58 RLRSGKEMRSLFATPDEETSVTFSFEHQQMSYEIERKPEQVLAKRKGNGTKKQAAKVTLT 117 Query: 119 CADGKILA----DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 DGK K + +L L LD +F++ +LL QG+F FL + ++ +L Sbjct: 118 IFDGKGKEIKQITKRTEADQLIRELMNLDAKQFSQIVLLPQGEFRNFLVSSSSDKETVLR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT-----LLTPEQVQSLTASLQVLT 229 L GT+ + Q + + E+ K + +L+ L+ + + + E A L T Sbjct: 178 HLFGTQFFQQFNERLKEKAKQQQQKLDHLEQELHLLQKRFVLVKEEEPAAGFEAVLAQWT 237 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 + + L +E+++L L + + + + R ++L+++ E+ L Sbjct: 238 NHQAILEKQITEEKEALTELQEKQKQLENSYYRFESLKKSYEEKTI---------LINKQ 288 Query: 290 RNLRPHWERIAEHSAALA--HIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 + L + I E + Q++ E RLQ + + +++Q+ +L Q+ Sbjct: 289 KELAAQKDEIEEKKRWIGYYEFTQRLVEPIQRLQEIKVEKIELSQKSSEQTKKLAMTTQN 348 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT 407 W + + + + + + + + AEQ +L L Sbjct: 349 YEEWQKNEANRVRRQTKIKEAAQKLQNKQMMVPIVESLRSKKQDAEQLTISLDK--EELN 406 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQ---KRLAQLQVAIQNVTQEQTQRNAALN 464 A+++ LA + E+ + Q + ++ + +L L Q + +++ + +L Sbjct: 407 AEKLYQNLAIYQERTRILQENLLDQEKLQEDRLAFGQLKYLDEKQQEIEKQKAKDTGSLA 466 Query: 465 EMRQRYKEKTQQL-ADVKTICEQEARIKTLEAQRAQ---------LQAGQPCPLCGSTSH 514 ++R+ K+ T+++ + + + EQ + + L++Q A+ L+ G+PC +CGST H Sbjct: 467 QIREELKKATEEITKNSQLLKEQTEQAEQLKSQWAKQQIARLQLFLRPGEPCLVCGSTEH 526 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 P + + ++ K+ ++ A ++ + + + E +L+Q Sbjct: 527 PIQQLKHE----------QPNKEDILKVEQQLAEAESAVERTQQIIAKSEAHENNLQQQL 576 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 L Q+ A L + L + ++ L ++ + ++ Sbjct: 577 SDLEQKIMATNIQLAEQEEHLQQALKKAFPEITEQKTKTTLV---VIEQSLDRRKSKMAN 633 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 + ++E+ +Q A+ Q+ E+ + L Q E +S +Q+ + + L Sbjct: 634 ARIELEEIRQQAEKLEQQLAVYKQQQTEKNNQLQQLQGEIKSLEQQLQDTDS-----NCL 688 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + L + E + V + Q+ + L +Q +Q + ++K Q + Sbjct: 689 EEEIRRLEKQLEEDSNQLAVEQKAGVQLLQDLHTLRTQLDLQHEQIEKIDEKIEKEQERI 748 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 L++ + + + Q + + +R + + T + +Q Sbjct: 749 AKKLESQ---------SYFSTIEEICAFAQQQAQYKENQRTVTSYHEEQLVTADRLRQLE 799 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 E+I Q+L + + + +++Q + + ++ Sbjct: 800 NIQLTETFPDTEEISQQLEEIRRMIEIKQEKIYGLQEQKISNQKIYDECLSIYHTSQTKL 859 Query: 875 QQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR----- 926 ++ L+ + K ++ + L ++ +AN L RL RY + Sbjct: 860 DELTQLQQLSQTFNGENPKKTSLERYVLQVYLQEVLQVANDHLQRLTKNRYQFELADTIG 919 Query: 927 --KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLF 981 + LE+ + D QA R TLSGGESF+ +L+LALAL+D++ + ID+LF Sbjct: 920 SYRGKTGLEINIYD-DQAGMSRSAHTLSGGESFIAALSLALALADVIQTQAGGVAIDALF 978 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +DEGFG+LD E L+ A++AL+ + + G+ IG+ISHV +KER+ QI++ G G SK+ Sbjct: 979 IDEGFGSLDEEALEMAMEALETIESEGRMIGIISHVRELKERVLQQIRID-TEGSGQSKI 1037 >UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S800_PROA2 Length = 1226 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 189/921 (20%), Positives = 380/921 (41%), Gaps = 52/921 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL+G W IDFT P+AS+G+F ITGPTGAGK+T+LDA+C+ALY +TPR Sbjct: 1 MKILQLCFRNLNSLQGTWSIDFTAPPYASDGIFLITGPTGAGKSTILDAVCIALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M+R + +C AEV FE +R WSQ+R+R QPDG LQ PR E++ Sbjct: 61 LGRLTKSSNEIMSRMSGDCFAEVTFETDAGMFRCHWSQHRSRRQPDGELQNPRHEISDVH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GK++ K++D L TG+D+ RFTRSMLL+QG FA FL + +RA +LE++TGTE Sbjct: 121 TGKVIESKMRDVLLAIEERTGMDFDRFTRSMLLAQGSFAVFLQSDADKRAPVLEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + + L+ + + + ++ + +L + EKQL+ + Sbjct: 181 IYSEISRRVHERSREEKNHLQLKRIELETIDMMGESERCALEEQINEDRRSEKQLLERLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +EQQ+L WL + +L +E ++ ++ + E+ +P L L+ A+ A ++ + + Sbjct: 241 KEQQALQWLHQLRDLNEERVSIERESRELVVRRERFEPSLQRLNRAEKASHIEGMYRELL 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 R +E L + + + ++ L + R Sbjct: 301 SLREEQEEARSARDEAAALLPPAEERCDASAKAVNDAVRQHAEHERLLKGSRKLFSTVRL 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 ++ A + + LR A +A E TA + E Sbjct: 361 LDSRIADAHSSLDTLKTRHAGLRAKADDFLAAIA-----SAEQERQRVQEHLTASVAYLE 415 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + LV+ ++ R ++ + +++Q + +++ Sbjct: 416 ANACDKALVSELSTLLELFGRCNAFVFQLREAEEASEAARKHQLDLQQEKETIDEKVRKA 475 Query: 481 KTICEQEA-RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL--EPGVNQSRLLALEN 537 + E+ + + + L +Q G+ P + ++AL + + L L Sbjct: 476 SSALEEASCQQQQLYSQLEATLDGRSLPE-WRNEAALIARHEALFDAATIVAASLKDLRQ 534 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 + E+ L + E + L+Q+ L ++ + + ++ + Sbjct: 535 QHTICKEKIINAGDLLSKTVSGIAESETLREQLQQEVLHLEERVRLESRIRDLEDERSRL 594 Query: 598 IQPW-----------------------LDAQDEHERQLRLLSQRHELQGQIAA-HNQQII 633 ++ + D R+L+ L + Q + A + + I Sbjct: 595 VKGRPCPLCGSLHHPLVQATLPFHDDTATSLDSARRELKTLDDKIAGQKLLQAGYEKDRI 654 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 Q ++++ Q + + L + LP + + + ++ + +++ Sbjct: 655 QAEERLGQIVSAIASDLERFEQYLPLPGFPGD----------NAEPSIDAISLARAAVEE 704 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + + E + + + + LAL SQ + + A L +A+ Sbjct: 705 RAEMTARVLGKAESIEEQLKRAGDRHGVLRDSLLALKSQAEKAGYRKEQALDELGRAEEL 764 Query: 754 FDTALQASVFDDQ------QAFLAALMDEQTLTQLEQL---KQNLENQRRQAQTLVTQTA 804 + D+ + + + ++ L+ + + K ++ + + L + Sbjct: 765 VAKCIDDKAACDERLITLLKPYRVKVETDEELSAVPDILRSKHAAWDEENRRKELHERQL 824 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 + + AL + + E+++ + + E + E+ + D + Sbjct: 825 HDIDAFILQQHLLLDALQTDIIEQDDEISRMKKDICELEEGRLELFDRKDVDRQEALLDE 884 Query: 865 TLMQQIAQMTQQVEDWGYLNS 885 L ++ ++ ++ +N+ Sbjct: 885 RLAAAAEEVGRRQDEHAAVNT 905 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 197/899 (21%), Positives = 353/899 (39%), Gaps = 66/899 (7%) Query: 192 QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTR 251 + + L K + L ++ +SL L L ++ ++L Sbjct: 339 RQHAEHERLLKGSRKLFSTVRLLDSRIADAHSSLDTLKTRHAGLRA------KADDFLAA 392 Query: 252 QDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL----RPHWERIAEHSAALA 307 +QE R Q+ L ++A E A +S L ++ E A Sbjct: 393 IASAEQERQRVQEHLTASVAYLEANACDKALVSELSTLLELFGRCNAFVFQLREAEEASE 452 Query: 308 HIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH--DRFRQWNNEP 365 R+ ++ ++ + S + QQ L L +R Sbjct: 453 AARKHQLDLQQEKETIDEKVRKASSALEEASCQQQQLYSQLEATLDGRSLPEWRNEAALI 512 Query: 366 AGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT-----LTADEVATALAQHAE 420 A A F T L+ +QQ T ++K+ + ++ + L Q Sbjct: 513 ARHEALFDAATIVAASLKDLRQQHTICKEKIINAGDLLSKTVSGIAESETLREQLQQEVL 572 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQ----------LQVAIQNVTQEQTQRNAALNEMRQRY 470 R L + + ++ RL + +Q +L+ R+ Sbjct: 573 HLEERVRLESRIRDLEDERSRLVKGRPCPLCGSLHHPLVQATLPFHDDTATSLDSARREL 632 Query: 471 KEKTQQLA---------DVKTICEQEARIKTLEAQRAQLQA-GQPCPLCG---STSHPAV 517 K ++A + I +E + + A + L+ Q PL G + P++ Sbjct: 633 KTLDDKIAGQKLLQAGYEKDRIQAEERLGQIVSAIASDLERFEQYLPLPGFPGDNAEPSI 692 Query: 518 EAYQALEPGVNQS---------RLLALENEVKKLGEEGATLRGQLDAITKQLQR----DE 564 +A V + + ++E ++K+ G+ LR L A+ Q ++ E Sbjct: 693 DAISLARAAVEERAEMTARVLGKAESIEEQLKRAGDRHGVLRDSLLALKSQAEKAGYRKE 752 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 L + E+ + + A + L + ++ +E +L +H + Sbjct: 753 QALDELGRAEELVAKCIDDKAACDERLITLLKPYRVKVETDEELSAVPDILRSKHAAWDE 812 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 + + I+ L + ++D+E S + + ++ + EL Sbjct: 813 ENRRKELHERQLHDIDAFILQQHLLLDALQTDIIEQDDEISRMKK---DICELEEGRLEL 869 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 ++ +Q + E L + E + + E + + QTL + Sbjct: 870 FDRKDVDRQEALLDERLAAAAEEVGRRQDEHAAVNTSLQE----IRHELQTLDVSMLKRH 925 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 Q L QF ++L S F D+ F A + ++ L LE ++ + Sbjct: 926 QRLAAMSEQFRSSLHRSGFHDENDFSNARLTQEDRESLL-----LEEKKLNTDASLLDLR 980 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 + + +E+++ +A +++RE G + Q+L+ D R +Q+ Sbjct: 981 SAACVKKHETLVSKNLTSSGIEEVEHSMADIEEEIRERGKRLGALEQRLQDDDMARSRQK 1040 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 QIA + + W + LIGS +G K+R F Q LT + ++ AN+QL ++ RY L Sbjct: 1041 EKADQIASLVEGCRLWEQMYELIGSADGKKYRNFVQSLTFEMVIVHANRQLIKMTDRYFL 1100 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 L++ VVD +Q VR TR LSGGESF+VSLALAL LS + S K R+DSLFLDE Sbjct: 1101 VPDRKNPLDLNVVDNYQGGEVRSTRNLSGGESFIVSLALALGLSSMSSRKVRVDSLFLDE 1160 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 GFGTLD ++L+TAL+AL L +GK IG+ISHV +++R+ Q+ V+ ++G G S L+ Sbjct: 1161 GFGTLDEDSLETALEALSGLQQTGKLIGIISHVAVLRDRLTTQVFVRPLSG-GKSSLDG 1218 >UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7A6_9ACTO Length = 1002 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 207/1062 (19%), Positives = 362/1062 (34%), Gaps = 95/1062 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ +LRL+ G IDF + +++GLF + G TGAGK+T+ AIC ALY + P Sbjct: 1 MRLHTLRLQAFGPFAGTHTIDF--DALSADGLFLLHGDTGAGKSTIFAAICFALYGKPPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ +E + G R + R + G + + R + Sbjct: 59 DRDL--LLRSHHAPAGLLTEVTLEVTLAGRRLRIDRIPAQMRPKRSGEGETSQKAETRLS 116 Query: 121 DGKILADKV----------KDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 + + AD ++ L G+ +F + +LL Q +F FL+A R Sbjct: 117 EWAVDADGQGRWEPSSKSHQEAAVEVTDLLGMSRDQFCQVVLLPQNEFTKFLHADAHGRR 176 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ-SLTASLQVLT 229 ELL +L T + I + + ++ + +A + + LT T Sbjct: 177 ELLGKLFRTGRFSFIERWLNDHSRTTEKNRDAARADVLRLAERIHQAAGPDLTTEYTAPT 236 Query: 230 -DEEKQLITAQQQEQQSLN--WLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 D+ L + Q L T Q A+ ++ L + E A+ ++ Sbjct: 237 PDDPHTLTEPARAWAQDLLHVSHTDHARTLQAATTAKENLVRQQTFEAAARELHQQQTIY 296 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 AR + H L R Q A + H QS E ++ Sbjct: 297 ISARQQLDLLQEQTPHQDTLIQRRDQARRAQRAAPLLHAADTAADDHTRAQSVERTAREH 356 Query: 347 SLNTWLQ-EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 L + R + A + + + + + +L + + A T Sbjct: 357 LLPEHKDLDASRLEAAEHRLRAEAAVLTALIPEEDTVHRLTAELKRTDAERQDFATQQRT 416 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 D + A+ R+ + Q L L+ ++ + T A + + Sbjct: 417 A-QDWLEAEPARRGTLEARREAARQAEEESRRHQTALDGLKTRLEAAKRRDTHL-AKVTK 474 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKT---LEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 Q+ + R +T A L G PC +CGS +HPA A Q Sbjct: 475 AEQQLADAEAVTGQTGQDYLTIRRQRTEGMAAELAATLTDGTPCLVCGSCTHPAPAAPQD 534 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 +P E + + L E+ + A+ +L R++ + + LT Sbjct: 535 GQPTRQD------EQDAEALHEQAKATQEAAAAVLHEL-REQAATATGEAGDTPLTDLQT 587 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEH----ERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 T LD Q+E Q ++A N QQ Sbjct: 588 QHTTLTTELTDALDRAADQGTIQEELHTLDGEHTAQTQQHSTATAGLSARNTHYDTLTQQ 647 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 + + L Y D+ + A ++ +L +Q LT Sbjct: 648 LTELTAKLTAARATYPTVAAHADDLT-------RTADRLKETAEASRSLATAVQTLTHRT 700 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 + Q+ + + L QQ +L+ + L+ + + Sbjct: 701 DQATQAAKDQGFDTL---------------------ALAQQALLSDEDLRTIEEEITQ-- 737 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + + A A++D L Q + A+ A Sbjct: 738 ----WREACAAHTAVLDNPALQQAAAQPSADLDAATAARAAADDQHAEAAAATNAAHTRS 793 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 ALT + + + Q L + + + + + ++ + + + L + + Sbjct: 794 QALTALTTDLGTAIQRL-QPLEQVHLTARHLAELVTGNSPSARVRMQLEAYVLAARLEEV 852 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVD 938 L EG ++ + A ++ LE+ D Sbjct: 853 VTAANTRLHIMSEG----RYTLSHSDHQAARGA---------------RSGLGLEIT--D 891 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 +W R T TLSGGESF SL+LAL L+D+V + +D+LF+DEGFGTLD +TL Sbjct: 892 SWTG-RPRKTDTLSGGESFFASLSLALGLADVVTHEAGGNPLDTLFIDEGFGTLDEDTLH 950 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 LD LD+L A +T+GVISHV ++ RI ++ V+K Sbjct: 951 KVLDVLDSLRAHDRTVGVISHVPELRRRITHRLHVRKSPAGS 992 >UniRef50_B0RFM2 Putative nuclease n=2 Tax=Clavibacter michiganensis RepID=B0RFM2_CLAMS Length = 1010 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 190/1072 (17%), Positives = 362/1072 (33%), Gaps = 91/1072 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L L+ + E IDF +GLF + GPTG+GK+TL+DA+ ALY Sbjct: 1 MDLHRLTLQAIGPFADEHVIDFAE--LGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLAS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELA 117 + + E E+ FE +R S R + G Q L Sbjct: 59 EGSSRDRLHSHHASPGVEPYVELVFETAAGIHRVRRSPQHQRPKARGTGTTNQNAAATLV 118 Query: 118 RCAD-----GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 R + G+++ ++ + GL +F ++++L QG+FA FL + ++R + Sbjct: 119 RLSSPDADAGEVVGTSTQEVGTEIQRIVGLTRAQFVQTVVLPQGEFAEFLRSTGEQRRLV 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L+ L GT +Y + + + E +A+ + A+ + E + + D Sbjct: 179 LQSLFGTAVYDRTAKQLAEMRTAAKARTDAADARVAEALTGLREATRVDALEVADAPDTV 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 + L +++ R RQ A E ++ +L + Sbjct: 239 RLLAELADAAEEARTDHER---------ARQDAATALADAERVSRALDRRRALIAREETV 289 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 R IA + + R+ A A + A +A + + Sbjct: 290 RAEAAEIAGLARRVEEARRAAAVAGPLAARDRADAARVAAEAEDDAARAACRAERTALAD 349 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHL--RQWQQQLTHAEQKLNALAAITLTLTADE 410 + + + + L R+ + AA E Sbjct: 350 ATAPALAERRDALVAELTTLADAEARERGLPRRRADVRAAEDAVAAREAAADEAEAALAE 409 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 E R + + + + + + AA + R Sbjct: 410 RPAGRIPLVEARDAAAAAAGGVDAARAAVAEAEATRRRVAELEELEARITAAREALDARS 469 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRA-QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 T + + ++ +I+ L + A +L+ PCP+CG+ HP P + Sbjct: 470 ATATTAVRHEAEL--RQRKIRGLAGELARELEDDAPCPVCGAVDHPHPAPSAPGHP--DD 525 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 + + L A T + + E + + +A + Sbjct: 526 DEIERAAEARARAERTQGDAAAALAAETARHEVAEAALDGITVEAADAEVAARAARLAEA 585 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 + E + R+ ++R + + ++ +++I+ ++ + + + + Sbjct: 586 EAAGGALRAAEAAVVAHDAETE-RIRTRRDDARAALSGLRERVIRARELLAEDEAAVRAV 644 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 ++A + +E ++ ++ Sbjct: 645 HAE-------------------RDADEGEAGGHEADDADADAPRVAALVAD--------- 676 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 A+ + L A A+F AL F Sbjct: 677 -------------RAAERAVVDRLIALAAARERTAADAAARAAEFAQALADHDFATADGA 723 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 AA + L + + E ++ + +H PD A Sbjct: 724 RAAALPPAELEAVARRVAAHEREQAVVAEGLVDPEIATLTGAEH-PDPDAARAALDAAQA 782 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI-- 887 + R ++ + DA R+ + Q A + + + I Sbjct: 783 AARTSAERAARARDRAERSAEALARHDAARRESARAGDQARAAIR-----MAEVANAITP 837 Query: 888 GSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQ---------RKASEALEVEVV 937 + G + +++V AN +L + GRY L+ R L +++ Sbjct: 838 ENTRGTTLGTYVLLRRFEDVVQAANARLRIMSSGRYELEVSEEREATSRSRKTGLALQIR 897 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETL 994 D D VR+ + SGGE+F SLALAL L+D+V + ++ +LF+DEGFGTLD ETL Sbjct: 898 DHVV-DRVREPASFSGGETFYASLALALGLADVVQAEAGGLQLGTLFVDEGFGTLDPETL 956 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 D + L L++ G+T+G++SHVE +K+R+ +I+V++ G S L ST A Sbjct: 957 DAVMSELGRLSSGGRTVGIVSHVEELKQRVADRIEVRRRP-DGSSTLTSTVA 1007 >UniRef50_A5VKB7 SMC domain protein n=8 Tax=Lactobacillus RepID=A5VKB7_LACRD Length = 1033 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 214/1067 (20%), Positives = 401/1067 (37%), Gaps = 70/1067 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L++ L IDFT+ F LF + G TGAGKTT+ DA+C AL+ +T Sbjct: 1 MRPLTIELHYFGPY-EHQVIDFTQ--FTERSLFLVAGNTGAGKTTIFDAMCYALFGQTTN 57 Query: 61 LSNVSQS-QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL----QVPRVE 115 + S + E + + FE + Y+ + NL Q + Sbjct: 58 DRDRSAAALRSDFAPADQETMVKFTFEHQDLKYQIMRRPKQVLKGRRDNLVEHNQAVDLI 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +D K+K+ L L +F + +LL QG+F FL++ + LL + Sbjct: 118 YPLESDHPQKITKIKEADTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKEALLRD 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------TLLTPEQVQSLTASLQ 226 L T Y Q + + + + L + + + L T E + L Sbjct: 178 LFNTSRYEQWATQLKNDLREQKKSLTTQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLS 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + L +QQ+Q+ ++ L Q +QE + + L + + + Q Q + Sbjct: 238 RLKANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKVGKTLQAQAGEIQET 297 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + + ++ ++++++ + +++ +LQQ + Sbjct: 298 KQQVKVLEWYQEHQTEYQRWKDGEKRLQKLTLDNKFLHEDLRNLQKQQQTIETDLQQTSK 357 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 Q N+ + + +++ E +QQ L L Sbjct: 358 QQEEIDQLQTEVADLTNKLPFFDDRDKLKSAVDELQTNLKQQEKQQAASQKKLQDAQQQL 417 Query: 407 T-ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 T E + L ++ K L QL+ + + + + + Sbjct: 418 TVVTNNLKEHENLGEVQVYIAKQEGLQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGD 477 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + ++ +L D+ + + +L+ PCP+CGS HP Sbjct: 478 AEKLVQKSQGELDDLNDRFARHQ----IAILAQKLKPATPCPICGSLDHPHPA------- 526 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + L E +VK + R +LD + +Q+++ + +L + + Sbjct: 527 SLADDGELVTEAQVKAATVKAQQNRSRLDQLKEQVRQSVAQIANLTTQVETRQANLAELL 586 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + I+ E + L + Q+ + Q QQ ++ Q E+ ++ Sbjct: 587 GDNELPSDWEGQIESHAQKLAEMKTDLDRIEQQVKEWRQEEEELQQESKFSQ--EELDKI 644 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + + ++ + A+ + + + + Q +I+ LE+L Q Sbjct: 645 DESVNRCKQDLIAKQTILKEKAASLPAKFPTKEAADKRIQTDQLKIKAFNNQLESLQQQR 704 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + + Q E+ +QQ L + L AQ+D L+ + Sbjct: 705 QENAKKLAGTNSRIDQTKEELATQTTQQDNLHRY-------LVNLLAQYDVQLKWNF--- 754 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + A TL+ L + ENQ + Q+ + + + H + Sbjct: 755 ---WQEASEQVATLSSLREQVTTFENQVQDNQSQQERLTKAINSHPM----------PDI 801 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 Q +L ++LR+ G++ Q KQ + Q+ +++ ++ Q++ + L Sbjct: 802 TSTQTKLNAEREQLRQYQQEIGQLTAQYKQLEETDQKIIKAVEKTGKLDQEINELQTLTD 861 Query: 886 LIGSKEGD--KFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS--------EALEV 934 ++ + ++ +++ AN QL RL RY + LEV Sbjct: 862 VVTGNTENHVSLERYVLQAYFQDVLVAANIQLDRLTNSRYQFELATESHGAGAKWSGLEV 921 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 V D A R RTLSGGESF+ SLALALAL +V S +ID+LF+DEGFG+LD Sbjct: 922 NVYD-DNAGRTRSARTLSGGESFMASLALALALCQIVQEQSGGIKIDALFIDEGFGSLDQ 980 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 + L+ AL +L L + IG+ISH+ ++E+IP Q+ V+ NG Y Sbjct: 981 QALEDALHSLQELEGH-RMIGIISHITELEEQIPDQLIVRSRNGRSY 1026 >UniRef50_A5HZ17 Exonuclease n=10 Tax=Clostridium RepID=A5HZ17_CLOBH Length = 1176 Score = 319 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 204/1194 (17%), Positives = 458/1194 (38%), Gaps = 166/1194 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L +K LNS + +IDF E + GLF I GPTG+GK+++LDAI +ALY + R Sbjct: 1 MKPKKLVIKGLNSFIEKQEIDF--ETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRA-RNQPDGNLQVPRVELAR- 118 S + DT EF++ R + +R + G + L + Sbjct: 59 DS------TQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTAARLVKN 112 Query: 119 -CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + +I+ADK +D + ++ GL FTRS++L QG+F+ FL K R ++LE + Sbjct: 113 TYEEEEIIADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIF 172 Query: 178 GTEIYGQ-------------------ISAMV-------FEQHKSARTELEKLQAQASGVT 211 G E YG+ I + E+ + + + E L + S + Sbjct: 173 GLEKYGKKLLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIA 232 Query: 212 LLTPEQ-------------VQSLTASLQVLTDEEKQLITAQQQ----------------- 241 E + L L L + +K L+ +++ Sbjct: 233 KEKEESNKLYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEKGKNALSVKPYI 292 Query: 242 -------------EQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL-AALSLAQ 287 E++ + + + ++ ++A ++E+ P L + Sbjct: 293 DELSKIESDRNINEEELQTAMEQLRNIDLNLKNIEEEYKKASEDKEEKIPLLMQKENNLL 352 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 A ++ E I A L Q+ +E + +++ + I + K S E++ +++ Sbjct: 353 QAIEIKKKVEVIKRERADLV---QKYKEKESLIRNKNIDKKHIEENINKISKEVKLKEEE 409 Query: 348 LNTWL---QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 +N+ ++ ++ ++ + + E + + L E K Sbjct: 410 INSLKIDGDRREKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYELKYKDTLETQR 469 Query: 405 TLTADEVATALAQHA-------------EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQN 451 + + + +++ L+ + + R +L+ ++ Sbjct: 470 DINKKLEYVSGKREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKE 529 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 + E+ + K K + + ++ + ++ L+ +PCP+CGS Sbjct: 530 KQVVKLNLEKQHKEILEILKLKEETIVSLEEKIKDIEKMDMASILATNLKDQEPCPVCGS 589 Query: 512 TSH------PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 H ++ + L+ + ++++ + + + + + + Sbjct: 590 MHHIKLAKKVDIKELEILKEDHRNAFKKLENIKIEEKEKNILLISVEKEEELILEELENL 649 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP----WLDAQDEHERQLRLLSQRHEL 621 + Q ++ + L + Q + + D + + ++ +++ + + Sbjct: 650 KEQLKGRNLEDLRGELQKEKNDFEKLNENIKDWEKEKLILEENINKLQKEKNDIDKEEAK 709 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + + +++I ++ + +++L L L +E + + + S ++ + Sbjct: 710 NHEAISKEKELIASIKKDMEEREILFKEKEKEYLNLKEEIKVSNVEEEISRVRASDKKIE 769 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ--- 738 ++N + L ++ + + E + + E+ + +++ +++ Sbjct: 770 EYNKVIKNEREILESENNKREETIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNV 829 Query: 739 ---------QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 Q + ++++ + + L+ + + + + EQ LE+L Sbjct: 830 GEISIEHLDQVKKSIGNIKEKEEILKSKLELEGKNREILWKNKISKEQIKINLEKLHN-- 887 Query: 790 ENQRRQAQTLVTQTAETLAQHQ---------QHRPDDGLALTVTVEQIQQELAQTHQKLR 840 E + + L TL + + + + + + ++KL+ Sbjct: 888 EKYIQLNKVLEENKFHTLEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLK 947 Query: 841 ENTTSQGEIR------------------------QQLKQDADNRQQQQTLMQQIAQMTQQ 876 +G + + + +N + + L+ + ++ + Sbjct: 948 GERIEEGSWKDIRLKKENKEKELEDIIKNIVIEEKLISDMENNIKSLKNLLDEKEKVAHK 1007 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVE 935 ++ L+ +G+KF +F L+ +V A+++L + GRY L+ + + Sbjct: 1008 KALLEDIDKLV---QGNKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMR 1064 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSET 993 D + +R T TLSGGE+FL SLALALALS + + ++ FLDEGFGTLDSE Sbjct: 1065 --DDFNGGGIRPTNTLSGGETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSEL 1122 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK-INGLGYSKLESTFA 1046 LDT + +L+ L + ++G+ISHVE +K R+P+++ V + G G SK++ ++ Sbjct: 1123 LDTVMTSLENLRSDRLSVGIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS 1176 >UniRef50_A7HCA0 DNA repair exonuclease, SbcC n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HCA0_ANADF Length = 1006 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 218/1064 (20%), Positives = 362/1064 (34%), Gaps = 92/1064 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LSL L+ K+DF + LF I GPTGAGKTTL DA+ ALY + P Sbjct: 1 MRPLSLELQAFGPYARAQKVDF--DALGGADLFLIHGPTGAGKTTLFDAMTFALYGDVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVELA 117 + + D A + F + YRA + R + G + P L Sbjct: 59 TRGTGRLRADRAAEGAAPRVV-FRFRLGAAVYRAERTAAWQRPKKRGEGTIEEAPTASLW 117 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 R LA K E L G+ +FTR +LL QG F L A +ER ELL++L Sbjct: 118 REGAEAPLATKPTAVTEKVTELLGMGAEQFTRVVLLPQGDFKRLLCADAREREELLQQLF 177 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGV-----TLLTPEQVQSLTASLQVLTDEE 232 GT +Y + ++ + +L + V ++L A L E Sbjct: 178 GTAVYKDVEELLVRKKNELEAAARRLAERREEVLGGADAGALASGREALEARLAEARGEA 237 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 +L + + +R ++ +A A L+ A A + Sbjct: 238 AARAVDDAAALDALAAGRQLAARLEALARAREESARAQAGAADLARDRERLARASAAERV 297 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS------AELQQQQQ 346 R + A + R +A A AK EL + Q Sbjct: 298 REKLAAARKAEVARVAREKDEALAAGRRDEAVAALARAGEALAKAEAEAPRRTELSARVQ 357 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 L L E +R + A R + ++ E R L A AA + Sbjct: 358 LLERVLPELERLAAADRAVAESRRAAASARAEDERARAALASAEARPAALEAEAARLRPV 417 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 A+E A A A + + + I + Q Sbjct: 418 AAEEGACAERS------------ARLETGLRAARERDARRAEISKLEQALAGEEREARHA 465 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 + + T + + +L G PC +CGS HPA + P Sbjct: 466 AEAARRATAHADGLAA----ARERELAAWLAKKLAPGHPCAVCGSAEHPAPARSRERVPE 521 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 E+ + L + K+ Q + TA Sbjct: 522 ---------REEIDEARAAERRLSERAAEAEKRRATTAGLLAEAHQRATGAAEGDARATA 572 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 ++ + E L + E ++ A + + + ++E + Sbjct: 573 AI----------------EGESREAAAALKRAREAAARVRALDVEATSARGEVEAARARQ 616 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 A E+ A ++ Q+ + L ++L + + Sbjct: 617 EAAGARRAAAEQHVAAAEAAGAELARQVQAAGAGPDTPAELAAARRELDALEAAAATARR 676 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 + + ++ A + +A A A A+ FD Sbjct: 677 AAGEAGAGHASALE-----------RLASCSEEAARAEAAATEAHAAAAEACAAAGFDGL 725 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 A AAL+ + + LE+ + R A L+ A + Sbjct: 726 AACEAALLAPEQRSALEESLEARTVAARAAAERAGALEAELS----------GASAPDLP 775 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 ++ A T + + + ++ + L + A++ +++ G + + Sbjct: 776 ALEARRAATAGAAGAARDAVVRLEKDHERLRQLEARLGELEARAAELARELAVAGKVAEI 835 Query: 887 IGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEV 936 ++F L+ + A+++L ++ GR+ L +R + L + V Sbjct: 836 ARGHNALNMSLQRFVLAARLEEVAEAASRRLLQMSRGRFRLRHDTAVARRNQASGLSLVV 895 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSET 993 D W R LSGGESFL SLALAL LSD+V S R+D+LF+DEGFG+LD ET Sbjct: 896 EDAWTGVTDRPVGALSGGESFLASLALALGLSDVVLRRSGGLRLDALFVDEGFGSLDEET 955 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 LD A+ L+ L SG+ +GVISHV ++ RIP +I++++ Sbjct: 956 LDDAVRTLEDLRKSGRVVGVISHVAELRRRIPARIEIQRKAEGS 999 >UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHR0_DESAA Length = 1223 Score = 317 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 229/968 (23%), Positives = 403/968 (41%), Gaps = 110/968 (11%) Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQ-AQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G E Q A E+ AR +L++L+ + + +++Q L + + + L Sbjct: 258 GLENLKQQQAAFDEKQAQARPDLDRLKTGRQAHDLEADYDKLQDLRKRQEEGSKVQAALE 317 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 +Q+L + + A + Q Q+ A K L L +L Sbjct: 318 EKLANNRQALKDGSAAKDAAAAALKSTQENQEKEARIIKDVRTLDT-RLKSAGEDLEQAE 376 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 +++ E + ++I +++Q+T + + +++ + + +SL Q Sbjct: 377 KKVLERKDSTRKQEKEIAAARSQIQATKEKLSE-KEAFIRKNKDCESLGKSLTGIEQIAG 435 Query: 357 RFRQWNNEPAGWRAQFSQQ-----------TSDREHLRQWQQQLTHAEQKLNALAAITLT 405 RF++ +N+ AG + +Q + +QQL +E L A Sbjct: 436 RFQEASNDHAGKKKSLTQAKAAASKAKTKHEKLHKQYESEKQQLEKSENSLKARKKELER 495 Query: 406 LTADEVATALAQHAEQRPLRQH----LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + + ++ LR L + + +K+ + +Q + + + Sbjct: 496 ILQGKSWEDWKENNSSLNLRLEKLTNLNSTCARADEAKKKTLIDKKTLQVNQGKLPELSK 555 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP------ 515 + ++++ + + + + ++ +E +R +L G PCPLCG+ HP Sbjct: 556 TIESLKEKRSVQEALVCNAEEKHLDACKVYDMEKERKKLSDGAPCPLCGALEHPYAVGNV 615 Query: 516 --------AVEAYQALEPGVNQSRLLA------LENEVKKLGEEGATLRGQLDAITKQLQ 561 +E + + +NQS A LE+E+++L L+ L ++ Sbjct: 616 PQKEDTSRELEQSRKILNEINQSIQKASQDYSLLESEIQQLNNGLNALKADLKKEQDKIL 675 Query: 562 RDENEAQ----------SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ 611 + ++ +D + Q+ + ++ D ++ E E++ Sbjct: 676 DGLKSLELPADLKDATLTVMEDIERCNQENKTCLDIISKARHKKDAVEELEKKFHEAEKK 735 Query: 612 LRLLSQRHELQ--------GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE 663 + + Q+ E + + Q + +E+ Q L + Y Sbjct: 736 IPDIRQKAESALHARESALENQKRSEEDLAQLELSLEKSQSELQLAIAPYGSFEISAKSV 795 Query: 664 ESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE------ 717 + L + + + + +R E L + L L++ E E L+ Sbjct: 796 KVILDSLKSRLKEYDERLKEKDELSKELSGLEASLKSFAALLEASQKELESALKEKTERK 855 Query: 718 -----------------------------------NWRQVHEQCLALHSQQQTLQ----- 737 ++C L S++Q+L+ Sbjct: 856 AGFDALSKERRSLFGGKDPDQEEKALAQAVKEAALRLEAAQKKCAELESEKQSLEDRLKE 915 Query: 738 --QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 + A L+KA A F L AS FDD++A+ AAL+ ++ L +LE LK+ L ++ + Sbjct: 916 LAKSLEEGANKLEKAGAAFQANLSASGFDDEKAYAAALLPKEELKRLEDLKKGLNQEKIR 975 Query: 796 AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ 855 TL+ Q +TL + + +E + E A+ K + G I Q+L Sbjct: 976 LATLMEQQTKTLQEEK-----SLNKTNRDMESLTGENAELSDKAKAVQEKIGAIAQELSA 1030 Query: 856 DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL 915 ++Q+ L+ I +++ WG L+ LIGS +G KFR FAQGLT + +V AN+ L Sbjct: 1031 HEKLAEKQKGLLNDIEAQSKECGKWGRLHDLIGSNDGKKFRNFAQGLTFEIMVSHANKHL 1090 Query: 916 TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT 975 + RYLL R +E L++ V+D +QA VR T+ LSGGESF+VSLALAL LS + S Sbjct: 1091 QTMSDRYLLIRDPNEPLDLNVIDNYQAGEVRSTQNLSGGESFIVSLALALGLSGMASRNI 1150 Query: 976 RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 R+DSLFLDEGFGTLD ETLDTAL AL L GK IGVISHV+A+K+ IP QI+V+ N Sbjct: 1151 RVDSLFLDEGFGTLDDETLDTALSALSNLKQDGKLIGVISHVQALKDCIPCQIQVEPDN- 1209 Query: 1036 LGYSKLES 1043 G S L+ Sbjct: 1210 SGRSILKG 1217 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 189/923 (20%), Positives = 374/923 (40%), Gaps = 46/923 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR KNLNSL GEW+IDF + S+G+F I+GPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MRILRLRFKNLNSLPGEWEIDFNSVDYTSSGIFTISGPTGSGKTTVLDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MTR T EC +EVEF Y WSQ RARN+PDGNLQ + ELA Sbjct: 61 LPSITGSSNEIMTRHTGECFSEVEFSANSGHYLCHWSQRRARNKPDGNLQGYKHELAYAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ +K TG+++ RFTRS++L+QG FAAFL K ER+ LLE++TGT+ Sbjct: 121 SGEIIENKPSKTASCVEEATGMNFKRFTRSVMLAQGNFAAFLKEKSDERSGLLEQITGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ ++ ++L+ + + L +PE++Q L + + E + + + Sbjct: 181 IYTTISIAVHERKRAENETKDRLEERLGEIRLRSPEEIQELKNTRIIKQKEVEAVSAQAK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q+ ++WL D+L + +Q ++ +A+P L L + A +L ++++ Sbjct: 241 EVQEKISWLENLDKLSKGLENLKQQQAAFDEKQAQARPDLDRLKTGRQAHDLEADYDKLQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + + +L + +A L+ Q++ + R Sbjct: 301 DLRKRQEEGSKVQAALEEKLANNRQALKDGSAAKDAAAAALKSTQENQEKEARIIKDVRT 360 Query: 361 WNNEPAGWRAQFSQQTSDR-EHLRQWQQQLTHAEQKLNALAAITLTLTADEV-------- 411 + Q E ++Q + + A L+ E Sbjct: 361 LDTRLKSAGEDLEQAEKKVLERKDSTRKQEKEIAAARSQIQATKEKLSEKEAFIRKNKDC 420 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 + + ++K L Q + A + + + +Q+ + Sbjct: 421 ESLGKSLTGIEQIAGRFQEASNDHAGKKKSLTQAKAAASKAKTKHEKLHKQYESEKQQLE 480 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRA-----QLQAGQPCPLCGSTSHPAVEAYQALEPG 526 + L K E+ + K+ E + L+ + L + + + L Sbjct: 481 KSENSLKARKKELERILQGKSWEDWKENNSSLNLRLEKLTNLNSTCARADEAKKKTLIDK 540 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 E+ K E R +A+ + +A + + ++ + ++ Sbjct: 541 KTLQVNQGKLPELSKTIESLKEKRSVQEALVCNAEEKHLDACKV----YDMEKERKKLSD 596 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 L + + + E R L Q ++ +I Q+ Q +E Q L Sbjct: 597 GAPCPLCGALEHPYAVGNVPQKEDTSRELEQSRKILNEINQSIQKASQDYSLLESEIQQL 656 Query: 647 LTTLTGYALTLPQEDE---------------EESWLATRQQEAQSWQQRQNELTALQNRI 691 L L +E + +++ L + + Q+ + L + Sbjct: 657 NNGLNALKADLKKEQDKILDGLKSLELPADLKDATLTVMEDIERCNQENKTCLDIISKAR 716 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + + E + E + + +H + AL +Q+++ ++ SL+K+Q Sbjct: 717 HKKDAVEELEKKFHEAEKKIPDIRQKAESALHARESALENQKRS-EEDLAQLELSLEKSQ 775 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL------------ 799 ++ A+ + A ++ + ++L++ + L+ + ++ L Sbjct: 776 SELQLAIAPYGSFEISAKSVKVILDSLKSRLKEYDERLKEKDELSKELSGLEASLKSFAA 835 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + + ++ + + A + + ++ L +E +++ + Sbjct: 836 LLEASQKELESALKEKTERKAGFDALSKERRSLFGGKDPDQEEKALAQAVKEAALRLEAA 895 Query: 860 RQQQQTLMQQIAQMTQQVEDWGY 882 +++ L + + ++++ Sbjct: 896 QKKCAELESEKQSLEDRLKELAK 918 >UniRef50_D0WRP2 Putative nuclease sbcCD subunit C n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WRP2_9ACTO Length = 1006 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 209/1081 (19%), Positives = 388/1081 (35%), Gaps = 113/1081 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + + IDF + + GLF + GPTG+GK+T++DA+ ALY Sbjct: 1 MRLRRLTVSGIGPFADTFSIDF--DALTAGGLFLLEGPTGSGKSTIIDAVVWALYGGVAG 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQN--RARNQPDGN-------LQ 110 + + ++ + E ++ F V+ +R + +A N+ N L Sbjct: 59 GRDSTDARMRSTHASPSRESFVDLVFSVEAGTFRVRRTPQWTKAGNKNPTNASAKLWRLS 118 Query: 111 VPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 VE + G+IL K A L GL +F ++++L QG+FA FL +R Sbjct: 119 ESAVEAQQFDAGEILEAKPAGTGAEIARLVGLSREQFLQTIVLPQGKFADFLTLDSTKRT 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ----ASGVTLLTPEQVQSLTASLQ 226 LLE++ T Y +++ ++ E+ +A+++++ + + G+ + ++ + Sbjct: 179 ALLEQVFDTSAYRRVAELLKERAAAAQSKVDSARGEWASSVEGLATALKLEGEAKAELAE 238 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 + + L ++E + A ++A AQ S Sbjct: 239 AADAAGDPADAVRTAALAAAAVLRAEEESESAEEESALAAKRARERAVAAQEAADLASRL 298 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 Q L +R+ + + + + L A R A AE + Sbjct: 299 QKRSRLLACRDRLRAEEPEIDKLDESLAAHALAAGVASFLAAFDRAKAELGQAERRFALL 358 Query: 347 SLNTWLQEHDRFRQWNNEPAGWR------AQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + ++ A + ++ + + L +++ T A + L Sbjct: 359 DASDRSPHDVDAATLESQTALLETMTSLTGRLTELAAVEKELAASRRERTAAREVLRRAQ 418 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 A A A + L A ++ + A L A R+ Sbjct: 419 EKVAAARAQASALPQAILRVEERLTAE-EAEASRVESMELEAASLAKAAARFADLDRARS 477 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 A+ E+ + L D +T+ + + L G+ CP+CGST HPA Sbjct: 478 ASKEANAAAAFEEARLLRDEQTLAWTASMSAIIA---GGLSEGEACPVCGSTEHPAPAP- 533 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 S + A +V+ + A RG L K+ R + E S D + LT++ Sbjct: 534 --------PSNVKATREDVEDAEKGAAAARGLLAETEKRAVRAQAEVASAEADLKGLTRE 585 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 +V ++L T L + + +LR + Sbjct: 586 --SVASALERTRSELASARRAQRKAAASQVELR------------------------DLR 619 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 +R + ++L+ + + L + AQ+ + + I E Sbjct: 620 ERSEAAGSSLSAAQSEQAAAEARIAGLDAAVERAQA---------RIVPELAGYETISER 670 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L E + + +V ++ + A L + + AL Sbjct: 671 LKAHVERANAQRRLV-------------------EAVRELLGARGQLDAREGELSAALSE 711 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE-TLAQHQQHRPDDGL 819 + F D A A M E + + R+ + + A +A+ D Sbjct: 712 AGFADATAARKAFMP---REAAEAARTRVAEHRQASHDVARDLAAPEIAELTGDEAPDVE 768 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 E+ + ++ R QL ++ + L + + Sbjct: 769 GTARLAEEAAETSRAAQRRAAVANERSLGARAQLGVVSEREEAWARLQSSAGPVLRLANL 828 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------- 930 + S F + ++ AN++L + GRY L R + Sbjct: 829 ANAGSD---SITKIPLATFVVRHRFEQILDRANERLADISLGRYQLARSDEKERGSREII 885 Query: 931 -ALEVEVVDTW---QADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 L V V+D A R R+LSGGE+F VSLALALAL+D+V + +++L +D Sbjct: 886 TGLSVTVIDRDGEADGAAKRSPRSLSGGETFYVSLALALALADVVRAENGGIALETLLID 945 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFG+LD +TL + L L G+ +G++SHV MK+ I ++ V+ + G G S++E Sbjct: 946 EGFGSLDEDTLGLVMSTLTGLARDGRAVGLVSHVAEMKKMIAERVTVRPL-GDGSSRVEI 1004 Query: 1044 T 1044 Sbjct: 1005 R 1005 >UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms RepID=Q080L9_SHEFN Length = 1232 Score = 316 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 302/932 (32%), Positives = 445/932 (47%), Gaps = 89/932 (9%) Query: 204 QAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 Q +A T + EQ++ LT + V +Q Q Q +QS++ + + +Q Sbjct: 299 QQKAQLSTRVLSEQIEQLTEQVSVAEQTLRQHTHKQTQAKQSVDKTNQAHKDLLNLIDKQ 358 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 + Q LS Q A E+ + A + +++ +L + Sbjct: 359 VLPLDQHISQLNYQLSQVILSHQQTAEQQHKTIEQQQQLMALQQQLSSAKQDIQQQLDNL 418 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 + + AA Q+ Q Q + + R +Q +N + Sbjct: 419 PQGQEVAKKFAAWQTQYSQVLQLNQQLSQLDTQRVQQQHNIEQTQTTLTELSPQIKLAKT 478 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q L A+ + +++ Q EQ+ R L L V QQ++ Sbjct: 479 TVTQALAQQADSQQAITTLLAGQDENQINHDYQQLVEQQAGRYQLTQLFSHFVRQQQQCQ 538 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 QL + +L+ +R ++ EK QQ+ D++TI +QE +I L +RA+L+AG Sbjct: 539 QLSSQSVQFNTDLQALAQSLSLVRTQWSEKNQQVKDLQTILQQEQQIANLTLERAKLKAG 598 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 +PC LCGST HP VE Y+AL V + R+ L+ E+ + ++G L+ Q A+ Sbjct: 599 EPCALCGSTDHPLVERYEALNVSVTEQRMQQLQIELDAIKQQGEQLKNQQTALQVNYDNS 658 Query: 564 ENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWL-----DAQDEHERQLRLLSQR 618 + + + Q QQWQ T +L +T + + Q L ++ + ++ + +SQ Sbjct: 659 LMQLSQAQTELQTTEQQWQQHTQALAVTFELHEQQQHKLTDYIAQSEAKQQQLAQTISQL 718 Query: 619 HELQGQIAAHNQQIIQYQQ-----------------------------------QIEQRQ 643 ++ Q + H Q +Q Q++Q Sbjct: 719 NQCQKTLHQHQHNATQAEQALAVLVNQQGLLQQQLDNLSQGLVSQQQQIESINKQLQQLN 778 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ------------------------- 678 L + LT P + ++WL QQ+ + W Sbjct: 779 SALDAHIIATGLTPPTLENADTWLHHLQQQLERWVAAQQQAIDNQQQLSVTAEKLTANNL 838 Query: 679 ---QRQNELTALQNRIQQLTPILETLPQSDELPHCEE--------------------TVV 715 + +L + ++ L L+ + + ++ + Sbjct: 839 HSTEMATKLAEVTEQVVTLNEQLDAVLAQRKAVFGDKIVEDEKLFSQHAVDQAQQVFVSI 898 Query: 716 LENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 + + + L +Q Q+ QQ A Q LQ+ QA++ ALQ+S F DQQ+F AL+ Sbjct: 899 QQQLQTADKHFAGLQAQLQSTTQQVTKANQELQQLQAKWQMALQSSPFTDQQSFEQALLT 958 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT 835 + L+QLKQ L+N +A TLV Q + Q G + + Q Sbjct: 959 PKERHTLQQLKQQLDNDIVKANTLVEQAKIKQTELAQQAEQHGYDIAQHGNIMLQH-QTM 1017 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF 895 K +++ + + +L+QD + R QQ L+ + AQ+ Q +D YL+SLIGS++GDKF Sbjct: 1018 EAKHQQDKQTLWRLSHELEQDTNKRAGQQQLLAEQAQIQQDYDDLAYLHSLIGSQKGDKF 1077 Query: 896 RKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE 955 RKFAQGLTLD+LV LAN+QL RL GRYLL+RK S+ALE++V+DTWQ DAVRDTRTLSGGE Sbjct: 1078 RKFAQGLTLDHLVALANRQLERLQGRYLLERKESDALELQVLDTWQGDAVRDTRTLSGGE 1137 Query: 956 SFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SFLVSLALALALSDLVSHKT IDSLFLDEGFGTLDS+TLDTALDALD LNASGK IGVIS Sbjct: 1138 SFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSQTLDTALDALDNLNASGKMIGVIS 1197 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 H+EAMKERI VQIKV K+NGLG SKL+ FAV Sbjct: 1198 HIEAMKERIDVQIKVTKMNGLGISKLQGEFAV 1229 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 249/916 (27%), Positives = 398/916 (43%), Gaps = 35/916 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT+ PFA NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKNEWKIDFTQSPFAENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSN+S++ N+LMTR TAECLAEVEFEVKG AYRAFWSQ R+R++ DGNLQ +VELA+ + Sbjct: 61 LSNISKTTNELMTRGTAECLAEVEFEVKGVAYRAFWSQRRSRDKADGNLQDAQVELAKLS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILA ++K K EL +TGLD+ RFT+SM+LSQGQFAAFLNA+ ERAELLEELTGTE Sbjct: 121 DGKILASQIKRKTELIEEITGLDFARFTKSMMLSQGQFAAFLNAEANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY ISA V + A+T L+ L+A+ V L +QV + ++ L Sbjct: 181 IYSLISARVHQHFSDAKTNLKVLEAKLGSVELFDEQQVVAQQLQIEQLNQALVIDQQQLA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q + W ++ QQ Q QQAL+ ++ +L L ++PA+ ++P +E+ Sbjct: 241 QLSQFITWADNTEQSQQTLVNIQAQQQQALSSVQQHSDELTRLEHSEPAQQIQPLFEQQQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ-EHDRFR 359 + + + +QIE++ ++ H + + + Q+ L + Sbjct: 301 KAQLSTRVLSEQIEQLTEQVSVAEQTLRQHTHKQTQAKQSVDKTNQAHKDLLNLIDKQVL 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + + Q SQ + + Q + +Q+L AL + D Sbjct: 361 PLDQHISQLNYQLSQVILSHQQTAEQQHKTIEQQQQLMALQQQLSSAKQDIQQQLDNLPQ 420 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 Q ++ Q Q+ Q V Q+ + K + Sbjct: 421 GQEVAKKFAAWQTQYSQVLQLNQQLSQLDTQRVQQQHNIEQTQTTLTELSPQIKLAKTTV 480 Query: 480 VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP-----------GVN 528 + + +Q + + A Q YQ + Sbjct: 481 TQALAQQADSQQAITTLLAGQDENQINHDYQQLVEQQAGRYQLTQLFSHFVRQQQQCQQL 540 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ------ 582 S+ + +++ L + + +R Q +Q++ + Q +Q ++ + Sbjct: 541 SSQSVQFNTDLQALAQSLSLVRTQWSEKNQQVKDLQTILQQEQQIANLTLERAKLKAGEP 600 Query: 583 ------------AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQ 630 +LN+++ Q ++ ++ +L +Q+ LQ Sbjct: 601 CALCGSTDHPLVERYEALNVSVTEQRMQQLQIELDAIKQQGEQLKNQQTALQVNYDNSLM 660 Query: 631 QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 Q+ Q Q +++ +Q A+T ++++ L ++++ QQ+ L ++ Sbjct: 661 QLSQAQTELQTTEQQWQQHTQALAVTFELHEQQQHKLTDYIAQSEAKQQQ---LAQTISQ 717 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + Q L + V++ + +Q L + QQQ + LQ+ Sbjct: 718 LNQCQKTLHQHQHNATQAEQALAVLVNQQGLLQQQLDNLSQGLVSQQQQIESINKQLQQL 777 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ- 809 + D + A+ A QLE+ + Q L + A Sbjct: 778 NSALDAHIIATGLTPPTLENADTWLHHLQQQLERWVAAQQQAIDNQQQLSVTAEKLTANN 837 Query: 810 -HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 H +T V + ++L + + + ++L Q QQ + Sbjct: 838 LHSTEMATKLAEVTEQVVTLNEQLDAVLAQRKAVFGDKIVEDEKLFSQHAVDQAQQVFVS 897 Query: 869 QIAQMTQQVEDWGYLN 884 Q+ + + L Sbjct: 898 IQQQLQTADKHFAGLQ 913 >UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WKU1_ACTMD Length = 962 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 202/1059 (19%), Positives = 352/1059 (33%), Gaps = 110/1059 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L L G +DF + ++GLF + G TGAGKTTLLDA+ AL+ + P Sbjct: 1 MRLHRLELSAFGPYPGREVVDF--DALGADGLFLLHGDTGAGKTTLLDAVAFALFGQVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + E + +E V+ S R + G Q + LA Sbjct: 59 ARGEVKRLRCDYASPDVETVVSLELTVRERRLVITRSPEYERPKKRGGGTTRQNAKAALA 118 Query: 118 RCADGKILA-DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + + ++ + +L G+ +F + +LL QG+FA FL A ER +LLE+L Sbjct: 119 WVSGWEGEGHGRIDEVAREVESLLGMTAHQFFQVVLLPQGEFARFLRADTGEREKLLEKL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 GTE + + E+ EL +L + E ++ + L+ Sbjct: 179 FGTERFLAVEKWFRERRAERGRELRELTEANVRLAGNVAEAARAEQPEDGGDPAWLEALL 238 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 +E R EL + + ++A + + + A Sbjct: 239 GGLAEE------AGRAQELAGTTAEARTGAERAWQGARDLEALVGRVRRAHDELVRCAED 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 E + A ++ V L+ R ++ A + A + + + + Sbjct: 293 EPERKRLLDEAEAARRAAPVVQALRGGDRARVALEGAEAAELASAKAVGALMGGVVADDP 352 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 RA+ + + L + ++ + L AL A+ A Sbjct: 353 ------------RAEGERCRDEAGGLTRLAEEAREQREALRALDAVVSRREVAAARLA-E 399 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT-----QRNAALNEMRQRYK 471 A + L + + + A L A + + R Sbjct: 400 LTAALEGAPERLRSAREAVEAAKLARAALPEASARAKAATALPAAVRASDEAEAARSVAV 459 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 + Q D + Q +L G PC +CG+ HPA A+ Sbjct: 460 DVHQAAVDARQAVRQRRLDGMAAELAGELVDGLPCQVCGAGEHPAPAAFDGEAVTAVDED 519 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 V A+ ++ ++ ++L + + A L Sbjct: 520 RAGAAEAV---------------ALERRRAAEDAAYRALGAVDALRSAVGDRDPAELVAE 564 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQ-RHELQGQIAAHNQQIIQYQQ---QIEQRQQLLL 647 + L + E E LR L L + A + ++ + ++ Sbjct: 565 HRELAGLAAL---TAERESALRGLETGTAALTEERAELERDVVGLEARGSELAATTAERA 621 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 L P + L + +R+ E+ R QL E Q E Sbjct: 622 ARLEQAREGFPDVAARRAHLLSAADALDELARRRAEVLGAAERAAQLA--GEVAEQVAEA 679 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 E R EQ L + + A + D Sbjct: 680 GFATAADAREAVRTA-EQVAGLERRVREADAARAAAEAVV-----------ADHPDVDPS 727 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 + A E+ + + + A + + E + + A VE Sbjct: 728 VEVDAGGAERRFREAGREAEAAAGASSAAVGRLARAEELAERLRA-----AWARLAPVEA 782 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 +EL + + + + A ++ + Q + +++S Sbjct: 783 EYRELDAFTDVINGRGQNTESMTLRTYVLAAKLEEVAVAASERLDRMSQ-GRYRFVHSTE 841 Query: 888 GSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRD 947 G + L ++V+D + R Sbjct: 842 AGPRGAR-----------------------------------GGLGLDVLDDYSGHQ-RP 865 Query: 948 TRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 T+TLSGGESFL SLALAL L+D+VS +D+LF+DEGFGTLD++TLD ++ LD L A Sbjct: 866 TKTLSGGESFLASLALALGLADVVSQGAVLDTLFVDEGFGTLDADTLDLVMNTLDDLRAG 925 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 G+ +G++SHVE +++RIP +++V+K S LE T A Sbjct: 926 GRVVGLVSHVEELRQRIPTRLRVRKA--RAGSTLEVTTA 962 >UniRef50_D2NSE4 ATPase involved in DNA repair n=2 Tax=Rothia mucilaginosa RepID=D2NSE4_9MICC Length = 1097 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 241/1160 (20%), Positives = 421/1160 (36%), Gaps = 180/1160 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + SL + + +I+F + + G+F + GPTGAGKTT+LDAIC ALY ET Sbjct: 1 MILHSLEFEAFMAYPKRQEINF--DTLNNAGVFLLNGPTGAGKTTILDAICYALYGETSS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---------NLQV 111 ++ + + ++ + G+ R + + G + + Sbjct: 59 DRESAKLHSTYAAHSGTKPRVLLDVTLHGKRLRIDRTPAYNKPITRGARKGQMREESAKA 118 Query: 112 PRVELARCAD------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 ELA AD ++ V + A T L +F + +LL QGQFA FL +K Sbjct: 119 TLAELAPGADPADEKAWTPISSSVAEVNRTIAERTHLTKEQFLKVVLLPQGQFAQFLKSK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTEL------------------------- 200 PKER ELL+++ E Y Q+ A + E+ K+A+ E+ Sbjct: 179 PKERKELLKKMFPVEHYEQLFAALTEEAKTAQQEVAQDENTQRGYLERARVEMLALQALL 238 Query: 201 --------------------------EKLQAQASGVTLLTPEQVQSL--------TASLQ 226 E+L A++ +T E + + + Sbjct: 239 DVADPDAEDAAGEGSATEDPVEAETSEQLTAESVTAENVTAETLDAWVAGGVERARETSA 298 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 E+++L + + L + +E + + + ++ + Q L+ A Sbjct: 299 REKQEQQRLTDEADRNTRLLAERAQLQADWREYEQLCERRTRLTVRADEHKAQREELAQA 358 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ- 345 + A L + ++ S ALA +Q+ + L T + + + ++ Sbjct: 359 RAAAPLHAQYAQVHAESQALAARQQEQAACASALDETGRALLAALRDEETSAEVIFPEET 418 Query: 346 -----------QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 + D R + A + + + + +Q AE+ Sbjct: 419 TFAALPDFEPAEQETQLEALLDTLRALQKKDAQLTDEEAAAAALLKQANALEQDRARAEK 478 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 +L+ L A L E + E+R L HLV Q +++ Q A Sbjct: 479 RLSDLTAQAEQLA--EELAGYSTADEERTLAAHLVTEAQQKHDAAQQMQQKLDAASAAVA 536 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQE-------ARIKTLEAQRAQLQAGQPCP 507 +++ Q+ +EK Q A +E + +L+ G+PC Sbjct: 537 AAQKQSKRTATAEQKAQEKWQASAQQALAATEEFKNLQVLRLAQASSLLARELKDGEPCA 596 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 +CGS HPA E V ++ L A + K ++ T D TK Sbjct: 597 VCGSVEHPAPARIAEGEQLVERADLDAAKEREDKAHKQARTHELAKDRATK--------- 647 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 E L + R + + +A Sbjct: 648 --------------------------------------AHQEASEALAAARTQYETLVAQ 669 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 + Q Q++ Q L + + E A +Q+ ++ + ++ Sbjct: 670 GECDVEQTAAQLQHAQTRLAQAQSRVTARDGVLVKVERVRAEQQKAQEALRTIESAAVEA 729 Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 Q R + + Q E + Q L + +L Q+ Sbjct: 730 QTRHRD-----AAARCEAAAAQLAPARAAVGFAQRVEAVEGYRAAHQRLARAVLLLGQAR 784 Query: 748 QK---AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 ++ A AQ + L S F+ + AA+ + + LEQ E + + L+ Sbjct: 785 ERHALAAAQAERLLAESSFESAELVQAAVRTPERVDALEQAVAAYELEHAR---LLEGFG 841 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 R G ++ +++++ Q T +GE L+ R + Sbjct: 842 REAIVAVAARAAAGEQAPDDLQGVREQVEQLRAAAHRLTLREGERESMLRSLHVLRGEYA 901 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF---------RKFAQGLTLDNLVHLANQQL 915 A+ Q+ + L +L + GD + G + ++H A+ L Sbjct: 902 AFR---AKTAQRYDRAQMLANLAAAARGDTLGGYEHQVDLVSYVLGAEFERILHSASLHL 958 Query: 916 TRLH-GRYLLQR--------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 R+ GRY + ++ L +E+ DTW R+ +LSGGESFL SL+LAL Sbjct: 959 DRMSEGRYGMVFSDHRAKGSRSGGGLNLEITDTWTG-EPREASSLSGGESFLASLSLALG 1017 Query: 967 LSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 L+++V +D+LF+DEGFGTLD+ETLD + +++L SG+TIG+ISHVE MK R Sbjct: 1018 LAEVVQANNGGIELDTLFIDEGFGTLDAETLDMVMGTIESLRDSGRTIGLISHVEEMKNR 1077 Query: 1024 IPVQIKVKKINGLGYSKLES 1043 IP QI V+K ++ S Sbjct: 1078 IPAQIVVEKGQNGSSVRVNS 1097 >UniRef50_A9WFV4 SMC domain protein n=3 Tax=Chloroflexus RepID=A9WFV4_CHLAA Length = 1032 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 227/1075 (21%), Positives = 407/1075 (37%), Gaps = 75/1075 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L L L+N + D R + ++G GAGK+TLLDAI AL+ E R Sbjct: 1 MIPLQLALRNFMCYRATENGDPLRLDLDGLHVLCLSGENGAGKSTLLDAITWALWGEARR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + DL+T+ E + E+ F + G YR + R R+ G + Sbjct: 61 PDD------DLITQGETEMMVELVFALDGRKYRVIRQRQRGRSSGRGTGAGKTWLDLQQF 114 Query: 121 DGKIL----ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 DG + +++ L + Y F + L QG+ F + P ER E+L E+ Sbjct: 115 DGTTWRPIGENTIRETQRKITELLRMSYTTFVNASFLLQGRADEFTSKTPAERKEVLAEI 174 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT------PEQVQSLTASLQVLTD 230 Y ++ E+ + +L +++ Q + + + V L Sbjct: 175 LDLAEYAELERRARERVRLLEADLIRVRGQLETLQPIANQVPFWQQAVAEAEQRQHTLQQ 234 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL-AALSLAQPA 289 + L Q + L L ++ Q+E R L + +L A ++ A+ Sbjct: 235 QRTALEAEFTQASEKLRHLEQEAHRQREVQNRIAILTGEIQRYSNELRELNARIAQAEQT 294 Query: 290 RNLRPHWE----RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 RP E + A L + Q + + L+ ++ + L Sbjct: 295 IAQRPLIEAGLAELHAARADLERLEQLRTRYDELMARKRELQQELKAELNLLNERLSHAI 354 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 Q L+ E R A R + + E L Q Q Q T EQ LN + + + Sbjct: 355 QQLDRLYAEAQRLVGLQQRVAAIRQRLRELAPVHERLVQCQHQRTALEQHLNHIRDLVMR 414 Query: 406 LTADEVATALAQHAEQRPLR---QHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + ++ Q L Q L L Q+ + L+ A + Q Sbjct: 415 QRLLQNQLEQQRNTLQSELNRSHQELARLDRQLSDVETWRNALRAAQDAQARVQILEAEQ 474 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ-PCPLCGSTSHPAVEAYQ 521 LN +Q + A + I+TL+ +A L G+ CP+C + Sbjct: 475 LNRRQQEQVVLDRLSAARAEAAQARRDIETLQTNQALLATGKGECPVC----------RR 524 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 L E+++L + + + A ++L++ + S Q+ L QQ Sbjct: 525 HLAANEADHVYAHYRQELERLQAQETQAKAAIQAAEQELKQIRSTLTSTEQELTRLRQQ- 583 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A++ L+ W +D+ L + L GQ+ + ++ Sbjct: 584 ---AATIESLHHQLNQAATWQTERDQ------LAQRIATLTGQLTTGS-----INPAVQA 629 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L+T L + + L E + +Q+ E + L+ + +E + Sbjct: 630 ELDTLITDLEAAGDI----ESVQRDLRMLNDEMMTLEQQLREHSRLEGELSTCQNDIERI 685 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + E V E RQ+ E + Q L + + + + AL S Sbjct: 686 EHALRDLPAAEATVAELQRQIAENDFGHEIRVAGRQVVAELESLNYRPEDLEATRALVRS 745 Query: 762 VFDDQQAFLAALMDEQ----TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 + +QA L+ EQ L EQ +Q ++ R+ QTL + A+ H+ Sbjct: 746 LTRWEQAERDLLLAEQRYATDLKLREQTQQLCDHAERERQTLHAE-----AEALAHQLRV 800 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + TV Q++Q+L+ Q L+ E + +Q + ++L Q Q++++ Sbjct: 801 LPTVQATVNQVKQQLSANEQALQAAGRDLAEKQAYYRQAESAAAEVESLQTQERQLSERT 860 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR-----LHGRYLLQRKASEAL 932 + L G K + + L AN+ L R +H R+ +QR + Sbjct: 861 ALFAELAEAFGKK---GVQAMLIETAIPQLEDEANRLLARLTDGQMHLRFEMQRDTKKGD 917 Query: 933 EVEVVDTWQADA--VRDTRTLSGGESFLVSLALALALSDLVSHKT--RIDSLFLDEGFGT 988 VE ++ ADA RD SGGE+ V+ A+ +ALS L++H+ R+++L +DEGFG Sbjct: 918 TVETLEVRIADALGTRDYAAFSGGEAMRVNFAIRMALSRLLAHRAGARLETLVIDEGFGV 977 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD++ + ++A+ A+ I VI+H++ +K+R P ++++K +L Sbjct: 978 LDADGRERMVEAITAVQRDFARIIVITHIDDLKDRFPATLEIRKTPLGSRWELRG 1032 >UniRef50_C0W8J1 Exonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J1_9ACTO Length = 1070 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 238/1148 (20%), Positives = 410/1148 (35%), Gaps = 182/1148 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + G IDF R FA++G F +TGPTGAGKTT++DAI ALY + Sbjct: 1 MRLHRLTMTAVGPYPGTEVIDFDR--FAASGRFLLTGPTGAGKTTIIDAIVFALYGDVAG 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVEL 116 + S+ + + E + E+ F YR + R + G Q +++ Sbjct: 59 DKDSSKDRIRSRLAGPGTETVVELVFSTSAGTYRVRRTPAYERLKLRGSGTTTQKASLKV 118 Query: 117 ARCADGKILAD-----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 R D + + GL +FT++++L QG+FA FL A ER + Sbjct: 119 WRLTDPAGRPSQDAALRPDEAGAELLRAIGLSREQFTQTIVLPQGKFATFLRASSDERHK 178 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ-----ASGVTLLTPEQVQ----SLT 222 LL ++ GT +Y ++ + + +AR ++E+ + + +++PE+ T Sbjct: 179 LLRDVFGTRVYDELQEELRRRSLAARGQVEQSHQRLLAAAEAFAEVISPEEADQHSPERT 238 Query: 223 ASLQVLTDEEKQLITAQQQEQQ----SLNWLTRQDELQ----------------QEASRR 262 AS Q E +A ++ + + L R E Q A+R Sbjct: 239 ASQQAGASEASPSPSAPEEAEALHPTAAERLRRAVEAATPGQEVIIEITSSVTGQTAARL 298 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQS 322 ++A + + + + AL AQ L + + L Q Sbjct: 299 REAQDEVACAQRRRETARGALDKAQALTELLAQRRALLQAHDELEAGAQD----AALTAR 354 Query: 323 TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL 382 T+ L A + + + QE + Q S+ + Sbjct: 355 TLELAQRAASVAVMVERARKDAEAASQVLTQEPGQQPQDEATTVLLAQALSECEQALGTV 414 Query: 383 RQWQQ-----------QLTHAEQKLNALAAITLTLTADEVATALAQHAEQR--PLRQHLV 429 R W Q QL +++ L L A A A A+ E + R+HL Sbjct: 415 RDWDQVAHAPQPGTALQLPASDRLLAHLEAQAREQRDQAAALAEAEATESQVSGRREHLD 474 Query: 430 ALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ--------------------- 468 AL + Q ++ Q + A+ ++ Q Q A L Q Sbjct: 475 ALRQEQERQSEQTEQTRQALASLPQRGEQLRALLATAHQAQERLPDLRSAYEAAGRRAEA 534 Query: 469 ------------RYKEKTQQLADVKTICEQEARI-------KTLEAQRAQLQAGQPCPLC 509 + +E +Q E++A T + +L GQPCP+C Sbjct: 535 AEQAQPVSTALAQARECAEQARKEADAVEKQAHALRSAWINATSASLVGELSPGQPCPVC 594 Query: 510 GSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 GS+ HP + A ++ + A R L+A ++ + Sbjct: 595 GSSEHPHPASAVAEPVS---------RADLDAADQSSARARQNLEAARAEVTALQARLTQ 645 Query: 570 LRQDEQ--ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 L + + Q +TA+ ++ +P Q+E + L ++ EL+ Q++ Sbjct: 646 LSAAAEGRSPEQAAAQLTAARTALTGAQEEAEPRTRLQEELDS---LTARESELRQQLSE 702 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 H + + QQ L L A S A + AQ + + Sbjct: 703 HKEAAAATAATLASEQQALDRDLEQIATARGTYTTVASRRAELGRLAQVAEALTAHWRTI 762 Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 +Q + L LE R+ + L S + + L Sbjct: 763 GALVQTSRSSQQDLAGEMTKAGFSSRTGLEAARRSEAEVKHLSSLVRERDAEAARVRAGL 822 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 + + +++ Q LEQ + L + Q+ V+Q A Sbjct: 823 ARPE-------------------ISMLTGQEEPGLEQARTVLAEAEQAWQSAVSQHA--- 860 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 ++ E ++ + Q + TT G+ L A + Sbjct: 861 ------------SVQAQAESVRTRARRLRQAAADLTTVVGDNAALLHVAALAAGENPE-- 906 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR 926 + +++ AN +L + GRY L + Sbjct: 907 ------------------------ATPLATWVLTERFKDVLTFANHRLETMSGGRYELIQ 942 Query: 927 KASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTR 976 E L + V+D + RD RTLSGGE+F VSLALALAL+D+V S Sbjct: 943 VDEEKNSARRRGLGMGVLDRLGGERTRDPRTLSGGETFYVSLALALALADVVATESGGIL 1002 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 +++LF+DEGFG+LD +TL L+ L L G+T+G++SHVE ++ +IP Q++V Sbjct: 1003 METLFVDEGFGSLDPQTLQDVLNELGQLQQGGRTVGIVSHVEELRRQIPDQVRVTATPEG 1062 Query: 1037 GYSKLEST 1044 + ++ Sbjct: 1063 SRLTVVAS 1070 >UniRef50_A3HX95 Probable exonuclease n=1 Tax=Algoriphagus sp. PR1 RepID=A3HX95_9SPHI Length = 1010 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 171/1044 (16%), Positives = 408/1044 (39%), Gaps = 46/1044 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + + I+F + + GLF I G G+GK+++L+ I LALY T R Sbjct: 1 MIPIRLEIQGLYSYREKQVIEFDQ--LTAAGLFGIFGAVGSGKSSILEGILLALYGSTER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG--NLQVPRVELAR 118 LS+ + +N ++ + E + EF+ + + A+ P ++ Sbjct: 59 LSDRGE-KNSMLNLQSEELIINFEFQSGKNNVNTYLGRYAAKRNPKKFEEVRPAEHTFYE 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +G+ + + G+ F +++++ QG+F F++ P RAE+++EL G Sbjct: 118 KVEGQW-----EPISAKAEEIIGMKKEHFKQTVIIPQGKFREFIDLTPGPRAEMMKELFG 172 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E + +S K + E +L+ Q SG+ + E ++ + S ++ + ++L+ Sbjct: 173 LERF-DLSGKTGSLLKVVKEEKIRLETQLSGLEGFSKEILEEKSNSQKIQKKDHEELMLK 231 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEE-EKAQPQLAALSLAQPARNLRPHWE 297 Q + + + Q+ Q ++ ++ E + +L L+P W+ Sbjct: 232 LQLSETQMKQQEEIQKKAQQLKVFQTNFRELSNKKPEIEEKRLLHKEFITAKTYLKPIWD 291 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 +I + L + + R + + QQ+ +++ + Sbjct: 292 QIHDTQKELEKYTTSVVDCE-RFKLRYIEEVKTLEDEEVELKSKNQQRPDREAKIRDLKK 350 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 + + + + L + E +++ L + L + ++ Sbjct: 351 VLEVKRLQVKLDEANQKLETLKPELESKKASQNQLEAEVSTLEKQSEDLESPDIKVLSEL 410 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 R +++ ++ N+ Q ++ + + K + Q + Sbjct: 411 QTALRDWGIWEEDRAKLEKIKKQLQEEIVAVKNNLEQIFSKLPSEEKSLETWQKSQKQLI 470 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 ++++ +Q + + L L+ G+PCPLCG+ HP+ + + + +++ + Sbjct: 471 LNLESERDQVMQKQGLGIHVHLLEDGKPCPLCGAVEHPSPLKSEKEKVEL-KAKNEEINQ 529 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E KL ++ + + N A + + + + + + Sbjct: 530 EKNKLEGILTLIQKEKENQIHLENHQRNSASKEEEILKIEKSLETMMEMISSHGISDASE 589 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 ++ + + R + ++Q QI + Q + IEQ ++ Y Sbjct: 590 LKEKVVSLTNAGRD------KEKIQQQIKSLRQSWNSQRGDIEQIEKS-------YQTAQ 636 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ-QLTPILETLPQSDELPHCEETVVL 716 ++ S ++++++E + + + ++I+ + + + ++ +L ++ V+ Sbjct: 637 LSQNTVFSSISSKKEEIKDPTFCKQFFSKTADQIEATILKVEADIEEAIKLLEGKQKVLR 696 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 E +L ++ A L+ +A+++ F+++ A + Sbjct: 697 EKREAQASNLTSLKG----FEKLKADAQSKLETLRAEYEKQKVKFGFENEAALVRLFEHS 752 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 +++ ++ + + ++ + + + + + E++++ + Q Sbjct: 753 LDAEKVDLEIRDFDQKFAITESRINELKAEDGVLEFN--------EIAFEELKELVIQLK 804 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 + + S + +++K + ++ L++ Q+ + + L L +G F Sbjct: 805 ENASSSQNSLLLLSEEIKTIQSQLENKKLLLETFGQLENRESNLKELERLF---KGSGFV 861 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 K+ + L L + AN + +L L + + V+D R +TLSGG++ Sbjct: 862 KYVSSIYLKELCNTANVRFMKLSKN-SLSLEIDDDNTFWVIDYLNGGKRRLLKTLSGGQT 920 Query: 957 FLVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 F SL LALAL++ V + D FLDEGFG LD L + L +L + +G+I Sbjct: 921 FQASLCLALALAEKVKALNQADQSFFFLDEGFGALDRNALRVVFETLKSLRHENRIVGII 980 Query: 1015 SHVEAMKERIPVQIKVKKINGLGY 1038 SHVE +++ I V ++ G Sbjct: 981 SHVEELQQEIGVYAQITLDPEKGS 1004 >UniRef50_Q03P50 DNA repair ATPase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03P50_LACBA Length = 1049 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 227/1075 (21%), Positives = 414/1075 (38%), Gaps = 66/1075 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M ++L L+ + IDFTR F + LF I+G TG+GKTT+ D +C AL+ +T Sbjct: 1 MTPVTLHLEYFGPYRDAT-IDFTR--FMTTPLFLISGKTGSGKTTIFDGMCYALFDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + F + Y + N+ G V L Sbjct: 58 TDRKAPAMRSDFATAADRTRVTFTFTHRDRRYEIIREPAQTLNKKRGQGLTDVAAAVTLT 117 Query: 118 RCADGKILA--DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 AD + + K + L +D +F++ +LL QGQF FL A +E+A +LE+ Sbjct: 118 VYADDREVTQLTKTNQVRDYLQELLQMDGKQFSQIVLLPQGQFRQFLIAPSEEKAAVLEQ 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L TEI+ + + + +Q K + + A+ + + ++ A+ ++ + + Sbjct: 178 LFNTEIFARWTEQLKQQLKKDQATSQTTAAEVTRLLASLQWTSENEEAAQTLIAAQRPEP 237 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + QQ+ +Q +L++ + Q + + + ++E+ Q L R Sbjct: 238 VVTLMAAQQATT-REQQAQLERRLATAQATVDRLVRQDEQEQSLLKDRQQLTQYRQQATE 296 Query: 296 WERIAEHSAALAHIRQQIEEVNTR-------------LQSTMALRASIRHHAAKQSAELQ 342 + A L +E V TR Q A + + L+ Sbjct: 297 LAQQAPAMDDLQTTVTALEWVQTRQPAWQEREQAQQAQQQRQADQQQAQQDLMAAQTALK 356 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 Q Q ++ + A WRA + QQ AE++ A Sbjct: 357 QAQAAVEQHQTLSAKITATTETLAQWRALEPIYQRVATLEQDLQQAQQDAEKRQIAYQQA 416 Query: 403 TLTLTADEV-----ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 T ++ L Q AE + L+ + Q + A LQ + + T Sbjct: 417 QTAWTTNQQAQTQQRAILDQQAEIYARQTKLLQQANDLADAQSQAATLQQQVAQ-QADLT 475 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 Q+ + + Q + Q D+ Q + + AQL G PCP+CGST+HP Sbjct: 476 QQISQITGRLQTAQSAAQTAHDLAAARYQVFLRQQIVTLSAQLTPGTPCPVCGSTTHPQP 535 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E A E++VK+ ++ Q D + QL + + + +Q+ Q Sbjct: 536 AQATVTE--------TATEDDVKRAQDQATHATQQADQLAAQLTTLQQQLNANQQEHQTA 587 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 Q +A + L + L + + +++ ++Q E Q + QI Q + Sbjct: 588 LQALRAQLSV--ADTMDLTAMGAILTQRCQEQQRAEQVNQ--EQQAALKQAQTQITQLTE 643 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 + Q + T D+ + L T Q Q+ + + + ++ + Sbjct: 644 AAVELQAKVTQTQQAVQQQNTTVDKLATTLTTEQ------QRLPADASTRAEYLTRVQKL 697 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 + L ++ E + V L + + + Q D A++ AQ Sbjct: 698 QDQLAADQQMWTAIEQQYQTAQQTVLVAQDRLATATKEVTQSDQRVARAQADLAAQLAHP 757 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 + D + L TL + Q + Q+ + TL+ ++ L + + Sbjct: 758 VAPLATDTEAQVARWLPQVATLPVKREQLQTFQAQQARLATLIETLSKRLQGQAKPDREA 817 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + + Q L + ++L+ + Q+L+ D + Q++ ++ V Sbjct: 818 TQSALIEASQAVTTLREQERQLKNLLEQNEQATQRLRAVLDQQATALQQTQELTELAGVV 877 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KAS 929 G + L ++ L ++ + NQ+ +L +GRY K Sbjct: 878 NGDGPNSKL-------GLERYVLQTYLRQILTVGNQRFQQLTNGRYQFVIDETPAASKKR 930 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGF 986 LE+ V D R TLSGGESF+ SLALALAL +++ +D+LF+DEGF Sbjct: 931 SGLEINVYDDHVG-EQRSVHTLSGGESFIASLALALALGEVIQQTTGSVDVDALFIDEGF 989 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 G+LD + L TAL++L+ + + IG+ISHV +++++ Q++V NG G S + Sbjct: 990 GSLDEDALMTALESLETIEGRHRMIGIISHVSELRDQVANQLQVV-ANGNGESTI 1043 >UniRef50_C1XNQ1 ATPase involved in DNA repair n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNQ1_MEIRU Length = 906 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 224/1041 (21%), Positives = 393/1041 (37%), Gaps = 139/1041 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L + F + LFAITGPTG+GK+TLLDAI ALY TPR Sbjct: 1 MKPLKLLLDGFGPYAEAQAVQFDHDV----SLFAITGPTGSGKSTLLDAITYALYKATPR 56 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S DL E+ F + + +R + LQ + + Sbjct: 57 IG--SSGLKDLKHPQAESAKVELTFAMGEQVWRVVRVVGKESQSRLEYLQQNQWKTHPA- 113 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +++V++ A + G+DY FTR++LL QGQF FL PKER E L +L G E Sbjct: 114 -----SERVRELDAKLAEILGMDYETFTRAILLPQGQFDLFLRGSPKERRETLIKLYGLE 168 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 + + + + ++L+ + + E++ +L + L E++L + Sbjct: 169 SLKAMRERAAARLAALNKQKDRLEGELDTLAEAEEERIAALQDEIAGLAQSERELGQRVE 228 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++L L +L ++ Q +E+ + +A L+ A+ A + P E + Sbjct: 229 EIERTLKKLEELSQLYSTLEALRRRKQTWESEQPRIAETIAKLARAEQAERIWPQLEALQ 288 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 L + ++ + L AL +R + E ++ Q+ L++ + + Sbjct: 289 TSQRDLEQAQHILKAHRSELAKLEALLEKLRQGFDPERLEGLKRSQAQIPLLKDQE--AR 346 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 E L Q E Sbjct: 347 LKRYGGQLELHHPSPLPFDE--------------------------------DRLEQLRE 374 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 L L Q Q RL + E + L ++ + + + +L + Sbjct: 375 AERLFADLARARTQAERAQTRLQAALREAEKAQAEHAELENKLKSLKDQGQGQKTELEEA 434 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 K E+E + + L+ G+PCPLCG HP AL P Q+ L AL+ V+ Sbjct: 435 KAALEREKLRQGIAHYHPHLKVGEPCPLCG---HP----VAALPPAQPQADLQALKTRVE 487 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +L LR A K+L + L+ Q L + + + Sbjct: 488 RLEATLTELRADYKAAQKRLDDLNEQLPKLQTQVQTLQAEADEAGKAYADLEAKSRALGS 547 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + E ++L L+Q A Y+QQ+ + + A Sbjct: 548 LEQVRAERTQRLAALAQEIR----AVAGGLTPAAYEQQLLKELKAAQDRADQIAQAEASL 603 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 E + ++ + + + L E + E+ + R Sbjct: 604 TEARGKVQSQAEVVRVLEA-------------SLARQQEAVETLWREARFEDLEAVRAAR 650 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 + AL + Q + + A+ L++ +A+ Q + A + Sbjct: 651 LSPAEVAALRKRVQDHELEGAQIARELRELEAKLQG----------QEPVDAAQVAEQKQ 700 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 +L +LK+ L++ +++ Q ++ R Sbjct: 701 RLAELKEALDSTKQRLGARKEALKHLQKQLERKR-------------------------- 734 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 Q++++ + +Q L +Q+ +G++F+ F Sbjct: 735 -----------QIQKEKADLDKQIDLWEQLEL----------------DLKGNRFQDFLL 767 Query: 901 GLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 L+ A++ + L H RY L+ + + V D W +A+R RTLSGGESF+ Sbjct: 768 ERYQSGLLSRASELIQSLSHNRYTLRLEDGDYF---VFDRWT-EALRPVRTLSGGESFMA 823 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL LAL+LS+ +S RI +LFLDEGFGTLD+ETL+ L+AL + G+ +G+++HVEA Sbjct: 824 SLCLALSLSEHLSRG-RIGALFLDEGFGTLDAETLEQVAGVLEALPSQGRLVGIVTHVEA 882 Query: 1020 MKERIPVQIKVKKINGLGYSK 1040 + ER+P +++V K + Sbjct: 883 LAERMPARLEVSKSPAGSRVR 903 >UniRef50_C8XKJ6 Exonuclease SbcC n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKJ6_NAKMY Length = 1099 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 247/1134 (21%), Positives = 402/1134 (35%), Gaps = 125/1134 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++ + + E +DF F F + G TG+GK+T++DA+ ALY PR Sbjct: 1 MRPVRLQMNGFAAFRDEAVVDFADADF-----FVLVGATGSGKSTVIDALTFALYGTVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ S L + + F+V Y R R +++ R+E Sbjct: 56 WNHRSMVMYGLAPT-ANQGKVALLFDVGDTRYLIARELRRTR--TGVHVRNARLERLLDP 112 Query: 121 DGKILADKVKD-------KLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 D + L GL Y F + ++L QG+FA FL AKP ER +L Sbjct: 113 TATGTIDDATESIATDSGVTAAVEKLLGLPYEHFCQCVVLPQGEFADFLRAKPAERRTIL 172 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 +L G +Y I + A E L Q +G+ T + T + Q +D + Sbjct: 173 LKLLGAGLYTDIGQRANGRASLAGQRAELLTEQLAGLADATD---AAETQAAQRESDFQS 229 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQ------------QALAEEEKAQPQLA 281 + +QQ + T D + E R A E +Q L Sbjct: 230 LVAAVEQQVPRLRTAATALDAARSERDRLIAERDLLAGLVVPHGIADLDAAHEASQATLT 289 Query: 282 ALSLAQPARNL--RPHWERIAEH--SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ 337 A+ A L R ER+A A L ++ E+ T + +A R A + Sbjct: 290 RAGEAEAAARLVDRQARERLAGAPDRAPLERALREHAELATVEAARPPAQAQARAAADRL 349 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 +A + + + + A Q + T++ + L L Sbjct: 350 TAAITDAGAATTALERARSARDVARSTVADLSDQVDRLTAEVDQLT-----AVVVPDGLV 404 Query: 398 ALAAIT--LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR------LAQLQVAI 449 LA T A ALA ++ Q L+A P ++ LA Q A+ Sbjct: 405 ELAGRTAAAAAAVTAAAEALAAAQDREVRAQDLLAQAPARGPIEESVRLVTDLATAQAAL 464 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLC 509 +T E T+ +AA + + + E A R++L AGQ CP+C Sbjct: 465 APLTAEHTRSSAARQAADNALAQAERAAEQARATREHARITHRAAALRSELVAGQACPVC 524 Query: 510 GSTSHPAVEAYQALEPGVNQSRLL---------------------ALENEVKKLGEEGAT 548 A A E +L AL + E+ A Sbjct: 525 DQPVATVPAAAHAPELADADEAVLARERAVARARAAQSAAATAETALATRLAAAQEQLAA 584 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEH 608 + +L L + + E + + S + + Sbjct: 585 VTARLAGRPTDLAELRAGLAQIDRLEADAREAATHLRRSRGAHDGAVAAARSLDADTAAA 644 Query: 609 ERQLRLLS-----------QRHELQGQIAAHNQ----QIIQYQQQIEQRQQLLLTTLTGY 653 R LR +L G A Q + Q+ +Q L T T Sbjct: 645 RRALRAARDPLVAFGAPGVDEADLLGAWTALADWAGAQAGARRTQLRAQQAALATAHTAQ 704 Query: 654 ALTLPQEDEEESWLATRQQ--------------EAQSWQQRQNELTALQNRIQQLTPILE 699 A + + + Q+ AQ WQ R EL A + Sbjct: 705 ARARDEFNAADDAAGAAQRAVNAATAAAERAAATAQHWQDRHAELAAAVAGAPGVEAATA 764 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L + DEL T + A + +L Q A + L+ A+ Sbjct: 765 DLRRIDELTAAVRTSDA-ALQSAAADRAAAAAAVASLTDQVRQAWRGLRAAR-------- 815 Query: 760 ASVFDDQQAFLAALMDEQT-LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 D A + E++ L L R + L +HR Sbjct: 816 ----DTVIGLGAPDLPEESVLAGWSALSAWATAAARAGSAAAPDVEDALLAATRHRDAAA 871 Query: 819 LALTVTVEQ--IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 LT + ++ + + + + R + + A+ R Q + ++ + Q Sbjct: 872 DQLTGELAARGLEVDGDLADRAPAAAAAALAQARAERARIAERRAQAAAVQGELDRARQD 931 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVE 935 + L +L+ S + F ++ + LD LV A+++L L G++ L + E Sbjct: 932 HQVASTLGTLLRS---NNFPEWLESAALDTLVIDASRRLGELSGGQFELTHRDG---EFM 985 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALA----LSDLVSHK-TRIDSLFLDEGFGTLD 990 VVD AD++R RTLSGGE+F SLALALA LS + + R+DS+FLDEGFGTLD Sbjct: 986 VVDHADADSIRSVRTLSGGETFQASLALALALSTQLSSMAAEGAARLDSIFLDEGFGTLD 1045 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 TL+ L+ L + +GV++HV A+ +RIPV+ V++ + + E++ Sbjct: 1046 DATLEVVAGTLENLAQGDRMVGVVTHVGALADRIPVRFVVRRDSRTSSIEREAS 1099 >UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRE3_SYNAS Length = 1223 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 198/912 (21%), Positives = 376/912 (41%), Gaps = 23/912 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +R KNLNSL GEW++DFTR + S+G+FAITGPTG+GKTTL+DA+CLALY TPR Sbjct: 1 MRILGVRFKNLNSLAGEWQVDFTRPAYISDGIFAITGPTGSGKTTLMDAVCLALYGSTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T EC AEV FE YR WSQ RA +PDG LQ R E+ Sbjct: 61 LGKVTKSGNEIMSRQTGECFAEVTFETAKGRYRCHWSQQRAYKKPDGELQQARHEIVDAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++L K+ + +TGLD+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTE Sbjct: 121 SGRVLKSKINEVGTFIEKVTGLDFERFTRSMLLAQGGFAAFLQAPPHERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ +LE LQA+ G+ +L+ E+ ++L +L+ D E +L + Sbjct: 181 IYSRISMKVHERRSEELDKLELLQAELKGIAILSEEEERALQDTLRKKQDWETELAGRIK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW---- 296 + +++L WL L++E + Q ++ +P L + A +L + Sbjct: 241 EGEKALAWLEGMAVLEKELEELDRKRQDFELRQKAFEPDSHRLERSLLAMSLEGDFRGIA 300 Query: 297 -------ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + E A+A + ++ + L + + + +Q +E + ++ + Sbjct: 301 TLRELQTQEMEELHDAVATLPEKEKTATEGLFARKKAESLLNETRTRQHSEGEVLKKVRD 360 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 + ++ +Q + SQ+ L Q +Q+ L A+ A AD Sbjct: 361 LDSRLGEQEKQLVEKDRAIAEIESQEKEYGNLLEQGKQKWKEVHAALEAIYAYREKFAAD 420 Query: 410 EVATA-----LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 E A A R + ++V + + + E + Sbjct: 421 EALIANFSAIERGFASLRDVEAKWNKACRELVAAAAQKDSALAELADREGEHEKIRRVFE 480 Query: 465 EMRQRYKEKTQQLADVKTICE--QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 + R+ +++ ++L+ + E + +R +L L Sbjct: 481 KTRKAHEDVREELSVILQGREFSTWRNEMDVLRERERLLIQTEEILKRIDRIAPALVSLK 540 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 + + + + +E+K + A L A+ Q+ N + L ++ + L Sbjct: 541 TQLEILNADRDRIISELKACSDHKALLEKTTAALEAQVSLL-NRIRDLEEERKRLADGRP 599 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 +I + ++E ++ L+ L ++ A + Q + Sbjct: 600 CPLCGATEHPYARGNIPAPNEVEEELQKTKNELNSASNLLNRLEAERARTEAGIQHSKNE 659 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++ L A+ + A + + A+ ++++ E Sbjct: 660 REEKAEALKADEKQAADFLSRLQIEASPPERAIRIRAELATVMAITAEMEKIIRQAEGKD 719 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + ++ V + + + + + + + + D A ++ Sbjct: 720 KQEKSAQDALDKVRKTFERAEKALQEARHNAEKAAADHERSERDCATLTEEMDKARADAL 779 Query: 763 FDDQQAFLAALMDEQTLTQL---EQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 D + F + + + L + ++ + R +TL +T + L + R Sbjct: 780 -ADVKPFGITRLPLEKIDVLLNGLRARKEAWHARENEKTLQQKTLDELKAGIEKREALLA 838 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 +L + +++ + + ++ + + D + ++ + + + + E+ Sbjct: 839 SLEEDLAARRRDREKLVRDRESLFGARRALFGEKIADEEEKRLTAEVEKAGNALEKAREN 898 Query: 880 WGYLNSLIGSKE 891 G + I Sbjct: 899 CGKIEKEISMLR 910 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 209/959 (21%), Positives = 374/959 (38%), Gaps = 107/959 (11%) Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-----EQVQSLTASLQVLTDEEK 233 E + + K+ + +L+ ++L + T ++ L D Sbjct: 259 LEELDRKRQDFELRQKAFEPDSHRLERSLLAMSLEGDFRGIATLRELQTQEMEELHDAVA 318 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS--LAQPARN 291 L ++ + L + + L E RQ + + L + +L L + R Sbjct: 319 TLPEKEKTATEGLFARKKAESLLNETRTRQHSEGEVLKKVRDLDSRLGEQEKQLVEKDRA 378 Query: 292 LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA------KQSAELQQQQ 345 + + E+ L +Q+ +EV+ L++ A R A + Sbjct: 379 IAEIESQEKEYGNLLEQGKQKWKEVHAALEAIYAYREKFAADEALIANFSAIERGFASLR 438 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 W + + A+ + + + E +R+ ++ A + + ++ L Sbjct: 439 DVEAKWNKACRELVAAAAQKDSALAELADREGEHEKIRRVFEKTRKAHEDVREELSVILQ 498 Query: 406 LTADEVAT-ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + E+ L + +I L L+ ++ + ++ + + L Sbjct: 499 GREFSTWRNEMDVLRERERLLIQTEEILKRIDRIAPALVSLKTQLEILNADRDRIISELK 558 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + A ++ RI+ LE +R +L G+PCPLCG+T HP Sbjct: 559 ACSDHKALLEKTTAALEAQVSLLNRIRDLEEERKRLADGRPCPLCGATEHP-YARGNIPA 617 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 P + L +NE+ L + +Q +NE + + +A +Q Sbjct: 618 PNEVEEELQKTKNELNSASNLLNRLEAERARTEAGIQHSKNEREEKAEALKADEKQAADF 677 Query: 585 TASLNITLQP--------------------LDDIQPWLDAQDEHERQ-------LRLLSQ 617 + L I P ++ I + +D+ E+ +R + Sbjct: 678 LSRLQIEASPPERAIRIRAELATVMAITAEMEKIIRQAEGKDKQEKSAQDALDKVRKTFE 737 Query: 618 RHELQGQIAAHNQQII------------QYQQQIEQRQQLLLTTLTGYALTLPQEDEEES 665 R E Q A HN + +++++ + L + + +T ++ + Sbjct: 738 RAEKALQEARHNAEKAAADHERSERDCATLTEEMDKARADALADVKPFGITRLPLEKIDV 797 Query: 666 WLATRQQEAQSWQQRQNELTALQNRIQQL------------------------------- 694 L + ++W R+NE T Q + +L Sbjct: 798 LLNGLRARKEAWHARENEKTLQQKTLDELKAGIEKREALLASLEEDLAARRRDREKLVRD 857 Query: 695 -----------------TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQ 737 + L E EN ++ ++ L + +LQ Sbjct: 858 RESLFGARRALFGEKIADEEEKRLTAEVEKAGNALEKARENCGKIEKEISMLRERIVSLQ 917 Query: 738 QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 + A L K + +D L+ S F D+ FL++ + E+ L + KQ L ++ + Sbjct: 918 IRTKQRAGELMKTKQHWDDRLRRSGFADESDFLSSCLTEEERQGLLEKKQILLREKAELD 977 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 +TLA Q+ + D + E +++++ +L++ G + Q L + Sbjct: 978 ARRQDRLDTLAVQQEKKLTDQSS-----EVLKEQIRTGDMELKQLRLDIGGMVQNLSDNE 1032 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 R+ Q +Q+I + ++ W L+ LIGS +G KFR FAQGLT + + AN++L Sbjct: 1033 SRRKNLQERLQRIDRQKRECARWDDLHQLIGSADGRKFRNFAQGLTFEMMTVHANRRLRE 1092 Query: 918 LHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRI 977 + RYLL + LE+ V+D +QA +R T+ LSGGESF+VSLALAL LS + S R+ Sbjct: 1093 MTDRYLLIHDEAHPLELNVIDNYQAGEIRSTKNLSGGESFIVSLALALGLSQMASRNVRV 1152 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 DSLFLDEGFGTLD + L+TAL+ L L GK IG+ISHV A+KERI QI+V G Sbjct: 1153 DSLFLDEGFGTLDEDALETALETLAGLRQDGKLIGIISHVAALKERIGTQIQVIPETGG 1211 >UniRef50_C2BSE3 ATP-dependent dsDNA exonuclease SbcC n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSE3_9ACTO Length = 1058 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 202/1121 (18%), Positives = 404/1121 (36%), Gaps = 159/1121 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 MK L L+ + S +D + A +GLF ITG TG+GK+T+LD I ALY + Sbjct: 1 MKFHRLTLEGVGSFYERTTLDL--DTLAESGLFLITGKTGSGKSTILDGIVYALYGDVAG 58 Query: 60 -RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR 118 R S + + +D + + F + Y + +P VP + + Sbjct: 59 ERESTTDRILSYYWDKDYPPEVV-LVFSAHDKFYELQRTVTFT--KPGRKTPVPSIAQLK 115 Query: 119 CADGKILADKV------KDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 +D + KD ++ + GL+ F ++++L QGQ FL A +R E+ Sbjct: 116 VSDTSVFTKVTEPIATGKDVTKMVVEILGLEKSHFLQTVILPQGQIQQFLTAGAGQRHEV 175 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L L G + + E+ + + + + + ++ + + T Sbjct: 176 LSNLFGASNFIALEKAAKERASQGKETTAEYTRRLDELLTTAYADLSNIEIAGENETAWH 235 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEA---------SRRQQALQQALAEEEKAQPQLAAL 283 L + + ++ D Q S Q+ A +E L Sbjct: 236 DTLEEFAAAKDAAAQSISALDRAGQPLFASATKILCSETAQSKDAAEQAQEHYLAAQTEL 295 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + A+ + + ++A+ + L +IE+++ R Q + A I A Q Sbjct: 296 TKAETEQRVILEARQMADKLSQLTAKTTEIEQLDQRNQKALHANAVIDADDAAQEPYQSA 355 Query: 344 QQQSLN-------------TWLQEHDRFRQWNN-EPAGWRAQFSQQTSDREHLRQWQQQL 389 + Q N + DR ++ + W + + ++ Sbjct: 356 RHQRANILDTLAQLVDNDTDLARFRDRVSALSDTDLQNWLEDADFSPHLADLRDEISAEV 415 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 +++KL + A L+L ++ A ++ ++ L + L + L Q + ++ Sbjct: 416 NASQKKLETIKA-NLSLQREKTTAAHSKESKLESLHNQMHQLADNAKTTKATLDQKRQSL 474 Query: 450 QNVT----------------QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK-- 491 + QE + + ++ K + +A ++ +Q Sbjct: 475 REQKSLADGLVSRQTELANVQELHEWAKSAEKLTTELKAAQENVASLQAHYDQAQENAAS 534 Query: 492 --------TLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG-----VNQSRLLALENE 538 A+L+ G+ CP+CGS +HP A + ++ Sbjct: 535 VLRKWSSTAASRLAARLKDGESCPVCGSRNHPHPAAETTNQTTFQDYEAAVRDAKKAQDR 594 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 + E + +L T QLQ + +SL D TQ A TA+ Q + I Sbjct: 595 LTHGNETKTEINTKLQTATDQLQG--RDVESLAADLAVATQALAAATAASEQVPQLEETI 652 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 ++++ ++ ++R L Q A + +I I++ + L + Sbjct: 653 AALEESRERNQ------TEREILIQQEAGLSTEIKNLHADIQELADKIQAELAAF----N 702 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 + + + L T Q + +Q + Q+ L +S E + Sbjct: 703 PDSDPKDLLETNQLSLDTVKQLSKFYDSWLAIRQEWIISHAALCKSLTDHGFESVAEAQT 762 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 + + +Q L + Q+T+ KA A L + D+ A T Sbjct: 763 YAKSRQQ---LETDQETVTSHH--------KAVADLRAKLDTDAYRDKAA--------AT 803 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 + LE L+ + ++ ++L +TA H+ Sbjct: 804 IPDLESLRAAVATGEQEYRSLTQRTAAMDRSHE--------------------------- 836 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FR 896 +++ Q+ ++ + L+ ++ K Sbjct: 837 ----------------NLCRLQEKYAQTKQEWDTKVSEIAGYERLSQVLNGDNAKKTTLS 880 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE----------ALEVEVVDTWQADAVR 946 + L ++ +ANQ ++ + G Y R + L +E+ + + D V Sbjct: 881 AYYLSKRLGQVIFVANQLISDVSGGYYQIRHNDQYEADRNQKYHGLGIEMYNGAE-DQVV 939 Query: 947 DTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 ++LSGGE F SLA+A+ALS++V ++++F+DEGFG+LD++T + + AL Sbjct: 940 PPKSLSGGEKFYCSLAIAMALSEVVQRERGGITLENIFIDEGFGSLDNDTREAVMSALHH 999 Query: 1004 LNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L G+ +G+ISHV ++ IP+Q++V+ ++L+ Sbjct: 1000 LQQDGGRCVGIISHVSELQGEIPLQVQVRNYQSGNTTELKP 1040 >UniRef50_C2KSA6 Exonuclease sbcc n=2 Tax=Mobiluncus mulieris RepID=C2KSA6_9ACTO Length = 1064 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 208/1119 (18%), Positives = 399/1119 (35%), Gaps = 149/1119 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ + S +DF + S GLF I G TGAGK+T+LDA+ ALY P Sbjct: 1 MRFHRLTMEGVGSFAHREVVDF--DALGSQGLFLIHGDTGAGKSTILDALFCALYGSVPG 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG--NLQVPRVELA 117 S N + + ++F V + YR + + N +E++ Sbjct: 59 GSENNERRMVSWYLPPKTKPRLTLDFSVGNKFYRLTRTLWSYNELGEKLSNYHAATLEVS 118 Query: 118 RCADGKIL---ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D + V + + GL+ F ++++L QG+ FL A ER +L+ Sbjct: 119 VKPDFCEIDETISGVNAVADRVVRVLGLESKHFEQTVMLPQGKAQEFLTANGTERYGVLK 178 Query: 175 ELTGTEIYGQISAMVFEQHKS--------ARTELEKLQAQASGVTLLTPEQ-----VQSL 221 L +EIY + + K +LE+L SG+ + + S+ Sbjct: 179 SLFKSEIYSDLEEAAKARQKQGADESKQYNAAQLERLSTLVSGLVNNPVLEGCGIDLDSI 238 Query: 222 TASLQVLTDEEK------------QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQA 269 +L D +K Q+ Q ++ + + +Q+ Q+ +A Sbjct: 239 QEALHPKQDGKKGWQPRVFDTLYSQVKPQLDQVKEFI--ANQSQHTRQQLEEAQKLADKA 296 Query: 270 LAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRA- 328 + A+ + A ++ E E A L Q T + + L++ Sbjct: 297 ADDFSGAKATFQKIQAAHALQDQLQVLEARTEEIANLREENAQAARAATVITAADNLQSP 356 Query: 329 --SIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA-----QFSQQTSDREH 381 A+ S+ +QQ + + W + F + S + Sbjct: 357 QLQASQKVAELSSLVQQILSKDPVLSNVQAQGLVLVADTKAWLSADSTMDFQRSDSWKSW 416 Query: 382 LRQWQQQLTHAEQKLNALAAITLTLTAD---------EVATALAQHAEQRPLRQHLVALH 432 ++ ++ + +L +A ++ + A+ + +L Sbjct: 417 FKRARELVQSQGNRLQTVAGELTQCHQQAEINQGYSVQLGELTQEQAKLLSQQDNLRKAQ 476 Query: 433 GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR--QRYKEKTQQLADVKTICEQEARI 490 + ++ QL A + +++ + + AL + R +R ++KTQ+L+ + +Q + Sbjct: 477 DAARAKLEQAQQLAAARVGLAEQKQESDKALEQARDLERLQKKTQKLSQLVATNKQAVKS 536 Query: 491 KTLEAQRA--------------QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 + ++A L G+PCP+CGS +HP + Sbjct: 537 QARLVKQALDAWIAADAPRLAETLVLGEPCPVCGSCAHPHPATSRGTVAD---------- 586 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 E + +L+ + +LQ E + +L + Q L Sbjct: 587 ------YAEFESGSARLEELQAKLQESEKQLSTLNGEIQNL------------------- 621 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + ++ + E+ R L+ R + Q ++ Q +E++ Q +L T + Sbjct: 622 EKILAGQSRQDLEKTNRDLNTRLQAATQAQQDLEKTQIEVQSLEKQLQDVLATTLELEKS 681 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 L + L + ++QL ++ E Sbjct: 682 LAAT--------------------RANLETGEVALRQLQAAIKADLGEKPGEVSVEDYAA 721 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + R + L + Q+ + A + Q Q AL+ + +D A E Sbjct: 722 KLLRHNQQSVQTLE-HIDAIYQEWLTARERWLTRQEQLQQALRENGYDTVTAARDDFKPE 780 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + L E ++ + E L + D L +Q+L+ Sbjct: 781 KILESDCATVSQWETDMTSTKSKL----EVLRDLLNKKIPDMHVLEQAQLAAKQKLSDLQ 836 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 ++ + + L A +QIA + + V N +G Sbjct: 837 SLEKDLALVSRKFEESLAGIAAKEAAWVESSKQIATLNELVAALSGNN-----PKGPSLS 891 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLL----------QRKASEALEVEVVDTWQADAVR 946 L ++ +AN + + YL + ++ E L + + + + D+ Sbjct: 892 SAYLSTRLKQVIEIANDTVKDISNGYLEMSFTSHSLDDRSRSKEGLGINIYNAAE-DSTT 950 Query: 947 DTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +LSGGE F SLA+ALALS +V +D++F+DEGFG+LD T D + L Sbjct: 951 SPLSLSGGEKFYCSLAIALALSAVVQAERGGVELDNIFIDEGFGSLDDTTRDIVISTLKR 1010 Query: 1004 L-NASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSK 1040 L S +++G+ISHV +K IP+Q++VK +G G ++ Sbjct: 1011 LYQDSKRSVGIISHVNELKVDIPLQLEVKNYRSGSGGNR 1049 >UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZD9_ENTGA Length = 1052 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 242/1072 (22%), Positives = 457/1072 (42%), Gaps = 58/1072 (5%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 +KN E ++DF F GLF ++G TGAGKTT+ D + AL+ ET + Sbjct: 1 MKNFGPYIHE-ELDF--GDFQEGGLFLVSGKTGAGKTTIFDGMTFALFGETSGNLRSGKE 57 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA---RCAD 121 T E F+ + Y + + G Q +V L + Sbjct: 58 MRSTFASPTEETSVRFSFDHQHLHYEIERRPEQVLAKKRGDGVTNQAAKVRLTIYDQQGK 117 Query: 122 GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEI 181 + K + L LD +F + +LL QG+F FL A E+ ++L + GTE+ Sbjct: 118 ERKQISKKNEVDIFIKDLLQLDAKQFFQIILLPQGEFRNFLIASSNEKEKVLRNIFGTEM 177 Query: 182 YGQISAMVFEQHKSARTELEKLQAQASGV----TLLTPEQVQSLTASLQVLTDEEKQLIT 237 Y + + + EQ K ++EK Q A + P SL +L + ++ + Sbjct: 178 YQRFNEWLKEQVKKQTKQIEKQQTAADHLVTRFEWTEPATPVSLVETLAYWQTDLEKQRS 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA----RNLR 293 QQ + ++ + QEA + + +ALAE+++ Q A L+ + + Sbjct: 238 HQQTIEAKKFQAEQEKKTAQEAFYLAKEIHKALAEQQELSQQAANLAAKESQILDDKLRL 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 + +EH L ++ EV +Q + S+ Q + ++ ++ Sbjct: 298 QQLDWASEHQEILRQKDERTAEVAQAIQQLTFNQQSLEQWQESQEIWDKSREVQVDRK-D 356 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 EH +Q A + Q + + Q+ +T E++ L E Sbjct: 357 EHTAAKQRLQILAQLKPLAEQVQQQEKQVASLQETVTQQEKQAQHLKEQQNLAMNQEQGL 416 Query: 414 ALAQHAEQRPLRQHLVALHGQ-IVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 Q + + G+ ++ Q + L + + + + Q+ T + L E +Q+ Sbjct: 417 KEEIQKHSIYQVQEVQLVRGENLLYQWQMLKKEEQQLTDTQQQLTDQQRKLQEKQQQLVS 476 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE---AYQALEPGVNQ 529 K +L + + + L G+PCP+CGS HPA + Y E ++ Sbjct: 477 KYDELTEELVQEKSRNAKMQIARLSLLLVEGEPCPVCGSFEHPAAQKHTEYSNEEIIDSE 536 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 +L +LEN+++++GE+ +T L+ + Q Q + + +L++ +Q Q + + L Sbjct: 537 QQLESLENQLQQVGEDRSTNLLLLEQVNDQFQTIKQKMSALKEKQQTTYQTLREILQPLM 596 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 + ++ + + L+++ E+ Q Q ++Q +Q L Sbjct: 597 ENMLGQTVLKEGAGKEPADPLLVEGLTEK-EISTTYFKCQQINQQLKEQFALDRQKLTEV 655 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR-----IQQLTPILETLPQS 704 T + E+ L T + + + + +L++L+ + ++QL E L Sbjct: 656 QTNSQHLTEELTALEASLKT---ASDALRLEEGKLSSLKEQTEGVSLEQLNEEQEQLAAQ 712 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 +++ EQ L QQ+ LQQ Q+ Q AQ + + L A+ Sbjct: 713 SSRLAALIEADQLEEQRLKEQYTILTEQQRNLQQFLADKQQAAQLAQERLEEVLPAA--C 770 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 +Q + L D + +L + E Q+R Q + A+ L Sbjct: 771 TEQQMRSLLNDLEERQELRSTIKTYEQQQRFVQQRQLELAQFLQNK----------AVPD 820 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +E +Q+++ Q+ + + ++Q+KQ+ ++ Q + QQ + +++ L+ Sbjct: 821 LEVLQEQVDQSETAVEQLQEQVIRGKEQIKQNQRLLEELQIIYQQNTKQLEKISHLQQLS 880 Query: 885 SLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEV 934 +I + K ++ L ++ +AN +L RL GRY + ++S LE+ Sbjct: 881 EVINGENEKKTSLERYVLQRFLTEILEVANVRLARLTRGRYQFELADKVGSYRSSTGLEI 940 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 ++ D A ++R TLSGGESF+ +LALA++L+D++ S I++LF+DEGFG+LD Sbjct: 941 DIYD-DNAGSLRRAHTLSGGESFIAALALAISLADVIQNRSGGIEIEALFIDEGFGSLDE 999 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 E+L+ A++AL+ + G+ IG+ISHV ++ERI Q+ V+ +G G SK+ + Sbjct: 1000 ESLEMAMEALEMIENEGRMIGIISHVRELRERILQQVVVQ-TDGSGQSKIRT 1050 >UniRef50_A7FLH1 Nuclease SbcCD, C subunit n=39 Tax=Enterobacteriaceae RepID=A7FLH1_YERP3 Length = 1229 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 342/955 (35%), Positives = 483/955 (50%), Gaps = 94/955 (9%) Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 + + AR+E + + + +Q + L +++Q + Q+ Sbjct: 273 QQALPGLQRLARSEPAEKLRPLQRERDRSQKDLQQTQQRITALAQQQQQYLAQLTPLTQA 332 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA 305 + T + QQ Q+ L + +L+Q A ++ + ++S Sbjct: 333 VEQATAARQQQQLNQHEQETLIEQRIVPLDNLITQQQQTLSQLAGQIQQLRAKEQQNSQQ 392 Query: 306 LAHIRQQIEEVNTRLQSTMALRASIRHHAA--KQSAELQQQQQSLNTWLQEHDRFRQWNN 363 LA Q++ + + RLQ HH K +Q + L Q+ + Q + Sbjct: 393 LALNEQKLLQTHQRLQQLADYANLHAHHQHWEKHLPLWHEQFRQLQLQQQQSAQSEQQLH 452 Query: 364 EPAGWRAQFSQQTSDREHLRQWQQ-----QLTHAEQKLNALAAITLTLTADEVATALAQH 418 + A QQ + + QQ A L + + ++ L + Sbjct: 453 QQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQKLLVLEQQQPSAQLRQQLNEF 512 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 EQR + Q L AL Q + Q Q+ Q L E RQ Y+++ Q L Sbjct: 513 NEQRQICQQLAALSPLAQQIQALYDKQQQQFTAQQQQLKQLEQQLTEKRQLYQQQKQHLV 572 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 D++ + E+E ++ TLEA+RA+LQ G CPLCG+ HPA+ AYQA++P R+ L + Sbjct: 573 DLEALLEREKQLVTLEAERAKLQPGDACPLCGAVEHPAIAAYQAVKPSETAVRVAKLRLQ 632 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI--TLQPLD 596 V++L EG LR Q+ ++ + QR E E Q RQ A Q+WQ + L++ TL D Sbjct: 633 VEQLDTEGTELRTQVASMQQHQQRIEQELQDHRQQLAAYQQRWQTLAQPLSLAFTLNEPD 692 Query: 597 DIQPWLDAQD-----------EHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ-- 643 + WL+ + E+ER + Q ++ Q+ Q+ Q I +RQ Sbjct: 693 ALALWLEQHEQQEQACQLKLVEYERLTQQYQQAKDILTQLEQRQQEHQQQLALITERQKN 752 Query: 644 -----------------------QLLLTTLTGYALTLPQEDEEESWLATRQQEA------ 674 Q+L TLT +L++P D++++WLA R++E Sbjct: 753 AQQTYQQLQSQYQHQQEALIAQQQVLNHTLTELSLSVPDADQQQNWLAQREEECQRWQQH 812 Query: 675 ----------------------QSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEE 712 + Q+ ++L+AL + QQ +L+ Q E+ Sbjct: 813 QQEQQRLTIEQKTLETRIENERRHLQECIDQLSALSQQRQQAETLLQQQIQQRRALFGED 872 Query: 713 TVVL--------------------ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 V + +QV Q L + L+QQ Q QA Sbjct: 873 IVAEVRQRLRLQQQQAELAQQNAEKALQQVQSQLNRLSGELTGLEQQCQQYQQRATTTQA 932 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 + AL S F D+ A AAL+ E+ L+QL+Q L +R+QAQ + Q E L QH Q Sbjct: 933 ELQQALSTSEFADETALTAALLSEEERQHLQQLQQQLNERRQQAQIRLQQAREILDQHLQ 992 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 P G+ + + +QQ+ Q +L+ T QGE+R QL+ D R Q+TL +QI + Sbjct: 993 LCPQ-GVDKSSELTLLQQQSEQLLAQLKTTTLRQGELRNQLESDTTRRHNQRTLFEQIER 1051 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEAL 932 QQ +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL+RLHGRYLLQRK ++AL Sbjct: 1052 SQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQRKTTDAL 1111 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSE 992 E++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+E Sbjct: 1112 ELQVVDTWQADAIRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAE 1171 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 TLDTALDALD+LNASGKTIGVISHVEAMK+RIPVQIKVKK+NGLG S+L++ F V Sbjct: 1172 TLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVKKVNGLGVSRLDNAFRV 1226 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 294/923 (31%), Positives = 433/923 (46%), Gaps = 38/923 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+ SQN+LMTR TAE LAEVEF+VKG YRAFWSQ RARN PDGNLQ P+VELA C Sbjct: 61 LI-VTPSQNELMTRHTAESLAEVEFDVKGIRYRAFWSQRRARNSPDGNLQAPKVELALCE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GKILADKV+DKL++ A +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGT+ Sbjct: 120 NGKILADKVRDKLDMIAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S VFE+HK A+ +L+ L +ASG+ LL EQ +L + L+ +E+QL Q Sbjct: 180 IYGRLSERVFEKHKQAKIDLDALHQRASGIELLNEEQRLALAQQIDALSQQEQQLSKEQL 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q +NWLT + QQ + QQ E ++A P L L+ ++PA LRP Sbjct: 240 VTQNQINWLTGWQQQQQHVQQYQQQQVLVEQEYQQALPGLQRLARSEPAEKLRPLQRERD 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR--- 357 L +Q+I + + Q +A + + +A QQQQ + + ++ Sbjct: 300 RSQKDLQQTQQRITALAQQQQQYLAQLTPLTQAVEQATAARQQQQLNQHEQETLIEQRIV 359 Query: 358 ---------FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL---- 404 + + + +++ + + L +Q+L Q+L LA Sbjct: 360 PLDNLITQQQQTLSQLAGQIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADYANLHAH 419 Query: 405 -TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + Q + + +Q Q+ Q LA LQ ++ ++ Q+ AL Sbjct: 420 HQHWEKHLPLWHEQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVAL 479 Query: 464 NEMRQRYKEKTQQLADVK------TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 E R + Q+L ++ + +Q QL A P + Sbjct: 480 AEARAQASYLQQKLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLAQQIQALYDKQ 539 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + + + L + + ++ L + ++ Q EA+ + Sbjct: 540 QQQFTAQQQQLKQLEQQLTEKRQLYQQQKQHLVDLEALLEREKQLVTLEAERAKLQPGDA 599 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 AV Q + + + + +L ++ EL+ Q+A+ Q + +Q Sbjct: 600 CPLCGAVEHPAIAAYQAVKPSETAVRVAKLRLQVEQLDTEGTELRTQVASMQQHQQRIEQ 659 Query: 638 QIEQRQQLLLTTLTG---------YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ 688 +++ +Q L A TL + D WL +Q+ Q+ Q + E L Sbjct: 660 ELQDHRQQLAAYQQRWQTLAQPLSLAFTLNEPDALALWLEQHEQQEQACQLKLVEYERLT 719 Query: 689 NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 + QQ IL L Q + + ++ E + + L SQ Q Q+ + Q L Sbjct: 720 QQYQQAKDILTQLEQRQQEHQQQLALITERQKNAQQTYQQLQSQYQHQQEALIAQQQVLN 779 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + +L D QQ +LA +E Q Q +Q + Q + E Sbjct: 780 HTLTEL--SLSVPDADQQQNWLAQREEECQRWQQHQQEQQ---RLTIEQKTLETRIENER 834 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 +H Q D AL+ +Q + L Q Q+ R + + +Q + Sbjct: 835 RHLQECIDQLSALSQQRQQAETLLQQQIQQRRALFGEDIVAEVRQRLRLQQQQAELAQQN 894 Query: 869 QIAQMTQQVEDWGYLNSLIGSKE 891 + Q L+ + E Sbjct: 895 AEKALQQVQSQLNRLSGELTGLE 917 >UniRef50_C5NXT7 Nuclease sbcCD subunit C n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT7_9BACL Length = 1008 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 197/1071 (18%), Positives = 425/1071 (39%), Gaps = 92/1071 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L LK K E + + +F ITG TG+GK+TL DAI ALY++T Sbjct: 1 MKPIRLELKEFGPYKNEII---EWDKIINEPIFLITGKTGSGKSTLFDAITYALYNKTTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +++ + D + +FE+ G+ YR + + + NL +V L + Sbjct: 58 GKDIASLRTKT-ALDKDKTQVNFDFELSGKKYRIERTLAYLK-AGNKNLTSGKVALMQYN 115 Query: 121 DGK--ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK +LA K ++ E L GLD +F + ++L QG+F FL +K E+ E L L Sbjct: 116 DGKLEVLATKEQEVKEKVEELIGLDDKQFCQIIILPQGKFKEFLLSKSSEKKETLRSLFN 175 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQA--SGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 T Y + + EQ K + ++ + + E++ +E +I Sbjct: 176 TYFYQKFVEQLQEQAKKIDSSHKQKEKELITRFEQFDIEEELTKFEYLKDENFEEILGII 235 Query: 237 TAQQQ----EQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ-PARN 291 +Q++ E++ L L R ++E L + + + +L LS + Sbjct: 236 NSQEETVKNEKKELLKLERSFSKEKEKFIELSKLNDKFTQLKNNKLELEELSKKEDYYSR 295 Query: 292 LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 L+ E++ E + I + + T+ L ++ + K +L ++ Sbjct: 296 LKLEVEKLKELQKSKDKIIE-YASLLTKKMKLKKLEEALLNEEDKYKLDLDTNKKLALEL 354 Query: 352 LQEHDRFRQWNNEPAGWR------AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + + E ++ + ++ E + ++LT ++ L + Sbjct: 355 NAQKTDIEELRKETIDYKFFYNNFNELILAKNNIEIYSKTLEELTLKKETYKELDSSLKV 414 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 + ++ + + + + + +K L + + V + + + Sbjct: 415 AKESYLEDIEEKNILDGSIGKLKLEVLKKEQDVEK-LEEYNNKLSEVNDKSVKLTVDKKQ 473 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 +++ EK + +V+ + + + + + L +L G CPLC + L Sbjct: 474 LKELELEKKKLEQEVELLNKNKEQ-EILNDFLLKLHEGDDCPLC-KQKIEHLPDIPDLAV 531 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 V++S +L+ K + + ++ + I K +N ++ + Q + Sbjct: 532 -VDESIEKSLQKVNKDIIQLETLIKKDEEEIGKISTLLKNLGDTINFKAKEELLQLEDEL 590 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + NI L + + ++D+ + R + + EL Q+ ++ + +IEQ ++ Sbjct: 591 KAENIKLTDISKVIR--TSEDKIKGLNREIEELSELFKNEDDIKQKHLEAKNKIEQFEKN 648 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + L +A +Q+++++ L + Sbjct: 649 VKVELDEFA---------------------------GYYEKIQSQVEEFDNTYNVLQNNS 681 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 +T + + L + + + + + + Sbjct: 682 NELLVRKTKLETEQKNNKTNLLEVSKRIENIVDSFTNSKLN------------------- 722 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + ++ M E+ + +L NLE+ Q + ++ + + Sbjct: 723 -KYYVTLEMAEEDIEKLN----NLEDYESQINKFEDTKKIIVNSIEKLEEELKELNQPGL 777 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 E+ QQ+L ++ + + +L+ + ++ + ++ + ++++ + + Sbjct: 778 EEEQQKLQDIESQVNDFIEKVVILNTRLENNKKLYKKIHSEYIELLESSKEIREIVAFSD 837 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE-------ALEVE 935 ++ K ++ + QG LD ++ ++L ++ + RY R+ + LE+E Sbjct: 838 VVSGKTENRKSLETYVQGYYLDLILVAGTKRLLQMTNDRYRFIRRDEKSKGGGLQGLEIE 897 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 + D + ++ R +LSGGE FL SLALAL L++++ S ++++F+DEGFG+LD+E Sbjct: 898 IHDIYL-NSTRIISSLSGGELFLASLALALGLAEVIQNESGGISLETIFIDEGFGSLDAE 956 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 TLD AL L L + G+ IG+ISHV +KERI +++V + K+ Sbjct: 957 TLDIALTTLIDLQSYGRNIGIISHVSELKERIRPKVEVYSKDNYAKIKMTG 1007 >UniRef50_Q826W9 Putative ATP-dependent dsDNA exonuclease n=6 Tax=Streptomyces RepID=Q826W9_STRAW Length = 999 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 211/1094 (19%), Positives = 374/1094 (34%), Gaps = 154/1094 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + G +DF + ++ GLF + GPTGAGKT++LDA+C ALY P Sbjct: 1 MRLHRLDITAFGPFGGAQTVDF--DDLSAAGLFLLHGPTGAGKTSVLDAVCYALYGAVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAE--VEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR 118 Q E +E V G AR + G +R Sbjct: 59 ARQSGQGMTLRSDHAAPSTRTEIRLELTVAGRRLEITRQPPWARPKKRGAGTTTDKAQSR 118 Query: 119 C-------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 K L+ ++ E L G+ +F + +LL QG FA FL A + R + Sbjct: 119 LREHDAAAGSWKDLSRSHQEIGEEITQLLGMSREQFCQVVLLPQGDFARFLRADAEARGK 178 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELE-----------KLQAQASGVTLLTPEQVQ- 219 LL L T + ++ + E+ ++ E+ ++Q V + + Sbjct: 179 LLGRLFDTHRFAEVEKRLAERRRAVEAEVRAGDATLLADAHRMQQAVGDVVEVPLPDLAP 238 Query: 220 ------------------SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASR 261 + L + +AQ + L+ + LQ+ + Sbjct: 239 GDPGLAETVLTWAAVARSTARERLTLAHCARTAAESAQAAADRVLDDVREVARLQRRYTE 298 Query: 262 RQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQ 321 ++ + + + + A + P + A T L Sbjct: 299 ARERAALLEERSDAHREAQTRMERGRKAEAVAPALDLRDAAEAEHRRAATDEARARTALP 358 Query: 322 STMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREH 381 T A + AA ++ + L R+ + Q+ +D + Sbjct: 359 ETFADAGAPGLAAAA-----RKAAEELGGLESARRAERRLGELTEERASLDRQERADDDV 413 Query: 382 LRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 L+ + L E L A +A E AT Q A +R Q +A + Sbjct: 414 LQDAESWLATWEATRADLQAGIE--SAQEAATRAEQLAVRRDPAQARLAAARRRDR---- 467 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 ++Q+ + A R+ + D+K C Q A L Sbjct: 468 ----------LSQDTDEARARALAAREHATDARVHWLDLKEQCLQGI----AAELAAGLV 513 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 G PC +CGS HPA E + Sbjct: 514 DGAPCAVCGSLDHPAPARKITGHVD----------------RETEERALTAYQRADETAT 557 Query: 562 RDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 DE S+R++ A T + P E R ++ Sbjct: 558 VDERRLGSVREELAAATAE---------------AGDAPTAHLAQEAAELERQHAEARAA 602 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + Q++ Q + + E+R A + D + A+ ++E + Sbjct: 603 ASGLHTARQRLAQAELEHERRVADQQQAALRAAARVSHRDTIDRERASLEEELAKARGAA 662 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + + A ++++ T +L + + Sbjct: 663 DSVAARAAQLERRTALL--------------------------------TDAADAVRTAE 690 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 AQ L+ A A+ A + FD AAL+D+ L++ +++ + ++ Sbjct: 691 DTAQRLKDADARLADAAFRAGFDTPGDAAAALLDDAAHRDLQRRLDAWQSEEAAVRAVLA 750 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + A Q T ++LR+ ++Q ++ + Sbjct: 751 EADTAAAARQPAAGLAAAEETAE---------LAARRLRDTASAQDAAARRCAELDRLST 801 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD-----KFRKFAQGLTLDNLVHLANQQLT 916 + T ++++A + ++ + + L D + + L+ + A +L Sbjct: 802 RALTSVRRLAPLREEHDRVARMAGLAAGTSADNERKMRLESYVLAARLEQVAAAATARLR 861 Query: 917 RLH-GRYLLQR------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 R+ GRY L + L + VVD W RDT TLSGGE+F SLALAL L+D Sbjct: 862 RMSSGRYTLVHSDDRAGRGRSGLGLHVVDAWTGRE-RDTATLSGGETFFASLALALGLAD 920 Query: 970 LV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 +V + R+D+LF+DEGFG+LD +TLD LD LD+L +++G++SHV ++ RI Sbjct: 921 VVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERDRSVGIVSHVADLRRRITA 980 Query: 1027 QIKVKKINGLGYSK 1040 Q+++ K + Sbjct: 981 QLEIVKGRTGSVVR 994 >UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12L91_SHEDO Length = 1265 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 262/901 (29%), Positives = 395/901 (43%), Gaps = 25/901 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT PF NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKDEWKIDFTLSPFKENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S+S N+LMTR T LAEVEFEVKG+AYRAFWSQ R+R+ DGNLQ +VELA Sbjct: 61 LSVISKSTNELMTRGTGSALAEVEFEVKGKAYRAFWSQRRSRDLADGNLQDAQVELAELE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA ++K K EL ++TGLD+ RFTRSMLLSQG FAAFLNA ERAELLEELTGTE Sbjct: 121 SGVILASQIKQKTELVESITGLDFARFTRSMLLSQGDFAAFLNASANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V + + L L+ Q V LL+ E+ ++ AS L + Q Sbjct: 181 IYSLISERVHLEFGEQKHRLNLLKVQLDSVKLLSAEEREAKLASALALKETLAQKQQQLL 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 L W Q + +Q LQ A + QL L+ ++PA+ L P +ER Sbjct: 241 ALVDCLTWCDAMQAQTQLVEQSEQGLQAAEEAIRDEKNQLQRLADSEPAQGLAPLFERKQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD-RFR 359 + S + +Q+ E+ +L S + + + L ++Q+ D + + Sbjct: 301 QLSQQHQALDKQVAELGQQLVSAQQTLKELSEQQSAAATALIVEKQAQQALHHLIDTQVQ 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + A R + +Q + R + +L H + A LTL E++T L+Q+ Sbjct: 361 PLEQKLAQSRFKLTQCQQALDKSRTTEDELNHELSAVQARKQ-DLTLEIKELSTLLSQYP 419 Query: 420 EQRPLRQHLVAL---HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN-EMRQRYKEKTQ 475 + + L + L Q++ +++ +L + + + Q T L +Q + + Sbjct: 420 QGQALGEQLSGWKTQVAQLIELEQQRGELDIQQRQLQQSSTLCKQNLETNQQQLTQAQQV 479 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA------VEAYQALEPGVNQ 529 Q+ + A+I L + R Q Q C + H E Y+ L + Sbjct: 480 QINASHLLAATTAQINELLSGREIHQLQQEYQQCLDSQHGRSELAKTFEQYRKLYATWLE 539 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE------NEAQSLRQDEQALTQQWQA 583 A ++ ++ + + +L K Q + E D + Q Sbjct: 540 LTQKAADDALQTIELTSELAKVRLQWRDKNQQVKDVTGLLSQEKHISSLDAERAKLQPGE 599 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A PL ++ D +RQ +LL + +L+ N + + + E Q Sbjct: 600 PCALCGSIEHPLVSEYQGINVSDTEQRQQKLLQELEQLKLAGEGLNLALSKLELSWEHTQ 659 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQE---AQSWQQRQNELTALQNRIQQLTPILET 700 Q L ++ + L E W++ + A N LE Sbjct: 660 QQLTHCISEQQELRNHWHALFAQLGLSLNEFALPAPWRRASDGDKASINPGVNEAAYLEA 719 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L + T + Q + +Q+ T + A Q+ + D Sbjct: 720 LESQLRSFIVKATEEQHKLSECITQLSGMQNQEATELKALQQAEAQAQRLVSARDVLSAE 779 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 Q + Q + L QNL + Q + + +++Q + Sbjct: 780 QCNITQGIEEQIRRINRLEEQQQMLIQNLNTECGQFGVTLPARESSASEYQHWLNE---- 835 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 L+ ++Q + Q K ++ Q +Q NR Q +T QQ+ + +++ Sbjct: 836 LSANLQQWRLAQQQLILKQQQLEVLQQSSSSISQQLNKNRTQIETDKQQLMTIEAELKAL 895 Query: 881 G 881 Sbjct: 896 N 896 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 240/872 (27%), Positives = 378/872 (43%), Gaps = 23/872 (2%) Query: 195 SARTELEKLQAQASGVTLLTPEQVQSLTA--SLQVLTDEEKQLITAQQQEQQSLNWLTRQ 252 EL +QA+ +TL E L+ Q L ++ T Q + Sbjct: 389 ELNHELSAVQARKQDLTLEIKELSTLLSQYPQGQALGEQLSGWKTQVAQLIELEQQRGEL 448 Query: 253 DELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH--SAALAHIR 310 D Q++ + +Q L E + Q A + L +I E + ++ Sbjct: 449 DIQQRQLQQSSTLCKQNL-ETNQQQLTQAQQVQINASHLLAATTAQINELLSGREIHQLQ 507 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA 370 Q+ ++ L + + + L+ Q++ + LQ + + WR Sbjct: 508 QEYQQCLDSQHGRSELAKTFEQYRKLYATWLELTQKAADDALQTIELTSELAKVRLQWRD 567 Query: 371 QFSQQTSDREHLRQWQ--QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHL 428 + Q L Q + L KL L + + + Q Q Sbjct: 568 KNQQVKDVTGLLSQEKHISSLDAERAKLQPGEPCALCGSIEHPLVSEYQGINVSDTEQRQ 627 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA 488 L ++ + L +A+ + L +E + Sbjct: 628 QKLLQELEQLKLAGEGLNLALSKLELSWEHTQQQLTHCISEQQELRNHWHALFAQLGLSL 687 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 L A + G + + A + + ++++ + + + Sbjct: 688 NEFALPAPWRRASDGDKASINPGVNEAAYLEALESQLRSFIVKATEEQHKLSECITQLSG 747 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEH 608 ++ Q K LQ+ E +AQ L L+ + +T + ++ ++ ++ ++ Sbjct: 748 MQNQEATELKALQQAEAQAQRLVSARDVLSAEQCNITQGIEEQIRRINRLEEQQQMLIQN 807 Query: 609 ERQL---------RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQ 659 S E Q + + + Q++ +Q + Sbjct: 808 LNTECGQFGVTLPARESSASEYQHWLNELSANLQQWRLAQQQLILKQQQLEVLQQSSSSI 867 Query: 660 EDEEESWLATRQQEAQSWQQRQNELTALQNRI------QQLTPILETLPQSDELPHCEET 713 + + + Q + EL AL + + + + + Sbjct: 868 SQQLNKNRTQIETDKQQLMTIEAELKALNAERFDCFGDKDIEHEKDQAEINKQQAENVNA 927 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 ++ + + ++ +L +Q SL + Q + AL AS F D+ +F AA Sbjct: 928 ALVSKQLEASTLENTIKTRLDSLNEQLTHLVTSLTEHQQHWQNALDASPFSDEASFSAAC 987 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + + L+ LK L+ + Q Q L Q L + QQ L++ ++ E Sbjct: 988 LSQADRQALQTLKNELDTRLHQQQALAQQAKLGLEKLQQRGLAAEYQLSLAP-ALRIEHG 1046 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 + Q ++ T +I + L +D++ + Q +L+ Q+ Q +D YL++LIGS++GD Sbjct: 1047 ELEQLQQQLTQELWQIERVLTEDSEQQAAQGSLVSQLEAAKQSYDDMAYLHALIGSQKGD 1106 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 KFRKFAQGLTLD+LV LAN+QL RLHGRYLL+RK S+ALE++V+DTWQ DA+RDTRTLSG Sbjct: 1107 KFRKFAQGLTLDHLVALANRQLGRLHGRYLLERKGSDALELQVIDTWQGDALRDTRTLSG 1166 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 GESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLDSETLD ALDALD LNASGK IGV Sbjct: 1167 GESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLDMALDALDNLNASGKMIGV 1226 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 ISH+EAMKERI VQIKV K+NGLG S+L+S + Sbjct: 1227 ISHIEAMKERIDVQIKVNKMNGLGISRLQSQY 1258 >UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=B4RWA1_ALTMD Length = 1238 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 261/941 (27%), Positives = 418/941 (44%), Gaps = 120/941 (12%) Query: 216 EQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 E++ A L L +++QL + +++L +Q ++ Q + Sbjct: 308 EKLNEKAAQLPELKTQKEQLSSEVTNAERALLQTKQQSSELEKRINEQVVPLDNNIAQST 367 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIR---- 331 A Q A S AQ R++ ++ E A A ++++ E+ L +L + Sbjct: 368 AAQQKANDSAAQFTRSINALTKKRTEIENASADNKKKLGELEAYLNENHSLSSMAEFISG 427 Query: 332 -HHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 A+ Q+Q +L QEH + +Q + L Q T Sbjct: 428 WSETARHIESEQKQIATLKQSAQEHRH------ALSSIDEAITQTNQALKTLTQTFDNAT 481 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVA-------LHGQIVPQQKRLA 443 L+ AT+ ++R + H + Q + ++ Sbjct: 482 ANVATCEEALNAALSNADKNSATSKTSLQQERDTKLHHWDNLIQIGHIQQQYLALEQDKV 541 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 L ++++++ Q+ + + YK+ L D++ + +A + L RAQL++G Sbjct: 542 SLSAQKEDLSKKLAQQQSDRQALVDAYKQTRSNLKDIEALIALDAEVAHL---RAQLKSG 598 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 +PCP+CG+ H A++ + +L+ ++ + ++GA + + L + Sbjct: 599 EPCPVCGANEHTTASV--AIDIPETVQKRDSLKEQLDDIEQQGAQAKESVTHTELTLTQV 656 Query: 564 ENEAQSLRQDEQALTQQWQAVTASLNITLQP----------------------LDDIQPW 601 + AL ++W+ ++ L+ + LDDI Sbjct: 657 NKQLDQTNAKRDALVEKWKQFSSVLSADISSFEKVDINTSQSVAQFTEQFKTRLDDISAQ 716 Query: 602 LDAQDEHERQLRLLSQ----------------------RHELQGQIAAHNQQIIQYQQQI 639 L ++ E+ L Q R L+ Q+ N ++ + + Sbjct: 717 LTRIEQCEQALNTAMQSKNEAQQALQAKQSDVAVSMQRRETLEKQLTERNAEVENKTKGV 776 Query: 640 EQRQQLLLTTLTGYALTLPQE--DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 L T+T + + + +WL + ++++ T L +Q+++ Sbjct: 777 NDSIATLRETMTAHGAEVHNLPIEGIATWLNEEAEALKTYKHNHQLHTNLNEELQEVSRT 836 Query: 698 LETLPQSDELPHCEETVVLE---------------------------------------- 717 L L + E + V E Sbjct: 837 LLVLNRDIESAETQLKSVSEELMQLDSTLIELRKSRMAVFPEGNISEVRSKASAAQVQAE 896 Query: 718 --------NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 Q L ++ L +Q Q+L +A F+ L S F D+QAF Sbjct: 897 QKLSECQSRLHQTDTILSRLEAEIAQLNEQIREKEQALTEATENFNRQLANSPFADEQAF 956 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT---VE 826 AL+DE+T +L +L++ L Q++QA + T + ++ Sbjct: 957 SNALLDEETRNKLLELQKQLTQQKQQADLKLENALATQQSLTARDHAQQWQRKLEEHGMQ 1016 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 ++ ++ + Q+ ++ G+I+QQL + + R++Q+TL++++A +D YL+SL Sbjct: 1017 WVENQITEQAQQKDALLSTLGQIKQQLNANNEAREKQRTLVEEMAAFETYYDDITYLHSL 1076 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 IGS GDKFR+FAQGLTLDNLV LANQQL +LHGRY L RK ++ L + V+DTWQ D VR Sbjct: 1077 IGSASGDKFRRFAQGLTLDNLVQLANQQLEKLHGRYQLIRKENDGLGLSVLDTWQGDVVR 1136 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 DT+TLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+ETLD ALDALD LNA Sbjct: 1137 DTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDVALDALDNLNA 1196 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 SGK IGVISH+EAMKERIP Q+KV K NG+G S LE +AV Sbjct: 1197 SGKMIGVISHIEAMKERIPTQLKVIKRNGVGLSALEKPYAV 1237 Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 233/951 (24%), Positives = 403/951 (42%), Gaps = 49/951 (5%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 LRLKNLN+LKGEWKIDFT+ PF NGLFAITGPTGAGKTTLLDAICLALYH+TPRL +S Sbjct: 3 LRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPRLGPIS 62 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKIL 125 S ND+MTR TAECLAEVEF++KG+AYRAFWS RAR + DGNLQ VELA G +L Sbjct: 63 TSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGKVDGNLQSADVELAEVESGDVL 122 Query: 126 ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQI 185 A +V+ K E LTGL++ RFT+SM+LSQG FAAFLNA +RAELLEELTGTEIYGQI Sbjct: 123 ATQVRPKNEEIEKLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTEIYGQI 182 Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 S V +Q A+ + ++ + GVTLL+ EQ+ L + + + QQ Sbjct: 183 SQAVHQQFSEAKQKKKEFAIKLEGVTLLSNEQITQLEEDQDGINGQVAAFNQTLTELQQQ 242 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA 305 W + ++A A ++A+ +L L+ ++PA LR + + Sbjct: 243 QQWQQSFNTNALALKEAKEAQLAANNAIDEAKQELNVLTHSEPAEKLRLPFLQRNGLQQD 302 Query: 306 LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE-HDRFRQWNNE 364 L+ ++++ E +L + + L Q +Q + + +++ +N Sbjct: 303 LSGYKEKLNEKAAQLPELKTQKEQLSSEVTNAERALLQTKQQSSELEKRINEQVVPLDNN 362 Query: 365 PAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH--AEQR 422 A A + + LT ++ +A + A H + Sbjct: 363 IAQSTAAQQKANDSAAQFTRSINALTKKRTEIENASADNKKKLGELEAYLNENHSLSSMA 422 Query: 423 PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT 482 I +QK++A L+ + Q + + A+ + Q K TQ + Sbjct: 423 EFISGWSETARHIESEQKQIATLKQSAQEHRHALSSIDEAITQTNQALKTLTQTFDNATA 482 Query: 483 ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKL 542 A + S + E L N ++ ++ + L Sbjct: 483 NVATCEEALNAALSNADKNSAT------SKTSLQQERDTKLHHWDNLIQIGHIQQQYLAL 536 Query: 543 GEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ--------- 593 ++ +L Q + ++K+L + +++ Q+L + + + A + + + Sbjct: 537 EQDKVSLSAQKEDLSKKLAQQQSDRQALVDAYKQTRSNLKDIEALIALDAEVAHLRAQLK 596 Query: 594 -----------PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 +D + +++ L Q +++ Q A + + + + Q Sbjct: 597 SGEPCPVCGANEHTTASVAIDIPETVQKRDSLKEQLDDIEQQGAQAKESVTHTELTLTQV 656 Query: 643 QQLLLTTLTGYALTLPQEDEEESWL------------ATRQQEAQSWQQRQNELTALQNR 690 + L T + + + S L T Q AQ +Q + L + + Sbjct: 657 NKQLDQTNAKRDALVEKWKQFSSVLSADISSFEKVDINTSQSVAQFTEQFKTRLDDISAQ 716 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + ++ + L + + + + + +++TL++Q ++ Sbjct: 717 LTRIEQCEQALNTAMQ----SKNEAQQALQAKQSDVAVSMQRRETLEKQLTERNAEVENK 772 Query: 751 QAQFDTALQ--ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR--RQAQTLVTQTAET 806 + ++ A + L E T L + + L+ + Q T + + + Sbjct: 773 TKGVNDSIATLRETMTAHGAEVHNLPIEGIATWLNEEAEALKTYKHNHQLHTNLNEELQE 832 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 +++ D + ++ + +EL Q L E S+ + + + Sbjct: 833 VSRTLLVLNRDIESAETQLKSVSEELMQLDSTLIELRKSRMAVFPEGNISEVRSKASAAQ 892 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 +Q ++++ ++++ E + + Q + + A + R Sbjct: 893 VQAEQKLSECQSRLHQTDTILSRLEAEIAQLNEQIREKEQALTEATENFNR 943 >UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis RepID=Q830T3_ENTFA Length = 1045 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 233/1084 (21%), Positives = 439/1084 (40%), Gaps = 77/1084 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL LKN E IDFT+ F + LF I+G TG+GKTT+ D + AL+ E+ Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTK--FEDSSLFLISGKTGSGKTTIFDGMSYALFGESSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVE----L 116 + + + + F+ Y + + G + + Sbjct: 58 KLRLGKEMRSTFADPSEATEITLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLI 117 Query: 117 ARCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + A GK L K ++ EL L L+ +F + +LL QG+F FL AK E+ ++L Sbjct: 118 VKDAQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASLQVLT 229 L GTE+Y S + E+ K A E+++ Q + T PE +L LQ+L Sbjct: 178 NLFGTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLE 237 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 ++++ E++ + L + + +++ + Q ++E+ + A + + Sbjct: 238 SQQQEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETV 297 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + S + +++ E + Q S + + L Q ++ Sbjct: 298 IERLKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMS 357 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQ-----QTSDREHLRQWQQQLTHAEQKLNALAAITL 404 ++ + + Q Q Q + ++ Q Q E + ITL Sbjct: 358 ELEEQQPLIAEKQERLQTIQRQLPQYQEYEQLAQQQIAEQANYQAIQKEYESCQQEKITL 417 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + Q ++ +R + Q A Q ++Q Q + + Sbjct: 418 ADKVATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQGELHELTQ 477 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL- 523 ++K+ + A ++T Q A ++ ++ L+ G+PCP+CGS HP + +Q + Sbjct: 478 RFAVEQQQKSAEEAKLQTKKSQWASLQ-IQRLSLLLEEGEPCPVCGSLEHPKQQTHQEVS 536 Query: 524 --EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 E + L +E V++ E + L + QLQ E ++ A Sbjct: 537 LEEIDQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADL 596 Query: 582 QAVTASL---NITLQPLDDIQPWLDAQDEHERQLR-----LLSQRHELQGQIAAHNQQII 633 Q L +T + +++ L + + Q EL+ Q+A ++Q+ Sbjct: 597 QLPLTGLTFSQVTPAEIAEVESQLAKEKQQIAQKLTEISVEKDHLAELEEQVAENSQRFE 656 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 +QQ+E QQ L + Q + ++ Q+ EL+A + + + Sbjct: 657 VLRQQVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQTLLQE---ELSAFERQKEN 713 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 +T ETL + + + T + + + + + L SQ + + + L + Sbjct: 714 VTTQGETLKKEEMILESTLTHLEKEQQTLQQTVAQLESQLNAVLTEQGVTEDQLTEWLK- 772 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + LE ++ + ++ L Q AE + Sbjct: 773 ------------------------EVPTLESQQEQIALFEQEQTQLTIQLAEIEKKLSSD 808 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + +T +EQI Q++ + +K + +Q +++ R + +++A + Sbjct: 809 TFPELSLITTEIEQITQQIEEQEKKYYQLHEKMQNNQQLVQEINAQRTTIEDKFEEVAAL 868 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------ 926 Q + N + F ++ L+ ++ +ANQ+L RL RY + Sbjct: 869 QQLADTVNGNN-----PKKISFERYMLQTYLERVLTVANQRLDRLTNSRYQFELNHEAGS 923 Query: 927 -KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 + LE+ + D + VR TLSGGESF+ +LALAL+L++++ + ID+LF+ Sbjct: 924 YRNQTGLEINIYD-DNSGTVRSAHTLSGGESFIAALALALSLAEVIQEQAGGVLIDALFI 982 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFG+LD E L+ A++AL+ + G+ IG+ISH+ +K RIP Q+++ K NG G S + Sbjct: 983 DEGFGSLDEEALEMAMEALETIENEGRMIGIISHIGELKARIPQQLQI-KSNGNGQSTVH 1041 Query: 1043 STFA 1046 A Sbjct: 1042 YQLA 1045 >UniRef50_C4FEI1 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FEI1_9BIFI Length = 1104 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 218/1168 (18%), Positives = 415/1168 (35%), Gaps = 187/1168 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK++ L+ + + KGE+ IDF + +F I G TGAGKTT+LD I ALY Sbjct: 1 MKLIGLKFQGVGPYKGEFSIDF--AALTRSHMFLIDGETGAGKTTILDCITFALYGNISG 58 Query: 61 -------LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR 113 + + ++ + + ++ FE G Y+ + S R + Sbjct: 59 NTEGRNGAGDKQRLRSRFLDGTEEKTYVDLIFEEGGHYYKVYRSPEYPRAKARSEGFTSE 118 Query: 114 --------------VELARCADG------------------------KILADKVKDKLEL 135 E D + + KV + Sbjct: 119 KSKANMMRIAGDYEAEFRSLIDEVPQNAENGREAERYYAFFDMPARAEAITSKVSEVSVE 178 Query: 136 TATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQIS--------- 186 L GL+ +F+++++L+QGQFA FL +P++R EL+++L + Y I Sbjct: 179 VTGLLGLNRSQFSKTIMLAQGQFAEFLRMRPEQRTELVKDLFCAQEYEDIQNQLNVMRQQ 238 Query: 187 --AMVFEQHKSARTELEKLQAQASGVTL-------------------------------- 212 V EQ + QA A + Sbjct: 239 YGRRVDEQRHDLAAAIRDNQANAGRIREALNAYRDIDGGSSDLTAASDAAQPEAMPFGDD 298 Query: 213 ----------LTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 + + ++ E AQ ++ D +E+ RR Sbjct: 299 ARWGLNEAGDIDEPAYSADQIVARLDGTLESVRSDAQTLVTKAETQFAEADSAWRESQRR 358 Query: 263 Q---QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 A+++A + AQ ++ L++ + A + + + + + + Sbjct: 359 NDTANAVRKAQGDLRSAQVRMEELNVLEQENKRDEQRVEQAMQANPIMDLARDRKRQDEL 418 Query: 320 LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR 379 + S + R ++ Q L + LQ + E + + Sbjct: 419 IASNVRDRERLQAEL-DQYESLDSLNRDHAQALQAAGVAQAAEREMEIAQTHGKLVGQMQ 477 Query: 380 EHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 + Q+ T Q L + + L Q ++ R + V + Sbjct: 478 QAQHALQKAETAWRQCQGKLEHAQRAIGQFPEESRLEQQLDEIATRLGAQGQLTETVNRA 537 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 + L + + + E+ + A + + + +++ + ++ + Sbjct: 538 RELLEHAQRHETLLPERDRAEATVKALERSHEDAVAAYERAQRQLYAAGAVR----YVQE 593 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L G+PCP+CGS HP Q E ++ + AL+ + ++ E R L + + Sbjct: 594 LHDGEPCPVCGSREHPHPA--QQPEQTPTKAGIDALKVQAERRAGELGEARIALAELGQN 651 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 ++ + + E L + L ++P +DE+ + R QR Sbjct: 652 IEAEHEASGGCDVLE---------AENRLAEAKRALQKLEPL---RDEYGKLKRSREQRR 699 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 + ++ Q + Q Q +Q L Q+ ++ Sbjct: 700 AFKNELDRAKQDCVAVQAQCAAARQALE---------------------------QAAER 732 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 + + ++ Q E + L+ + + L + +TL QQ Sbjct: 733 AEGITAQSVEQERERAERRLAEAQRQERRAQQIEQKLKERNAIETRITELTAHNETLNQQ 792 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A++L++ L +S F D A A +DE+++ QL+Q + + AQ Sbjct: 793 RGTIARALREK-------LASSAFADLDAACHAALDERSIQQLKQRIDSYKRNHAAAQGE 845 Query: 800 VTQTAETL--AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 + + + L +H ++ T E ++ + + +R +T+ DA Sbjct: 846 LERADDELTRQRHAWKAIGGQYSIERTAEALEASRLRRDEAMRLQSTAA-------TLDA 898 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK---------FRKFAQGLTLDNLV 908 + R+ L + Q + + + ++ GD+ +A +++ Sbjct: 899 ERRRYASQLRVMASDWRQAMVSYAPIRTMALLAMGDRNSPAAHKVSLITYAVTERFRDVL 958 Query: 909 HLANQQLTRLHGR-YLLQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVS 960 AN+ L + G Y L+ E L +EV+D D + TLSGGE+F VS Sbjct: 959 DRANELLKDIRGGIYELRLGDHEGRAGGKTGLPIEVLDRRT-DIATEPSTLSGGETFFVS 1017 Query: 961 LALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 LALALAL+D++ +D+LF+DEGFGTL E LD +D L + G+ IG+ISHV Sbjct: 1018 LALALALADVIQAENGGVSMDTLFIDEGFGTLSDEFLDDVMDVLRGIA-RGRDIGIISHV 1076 Query: 1018 EAMKERIPVQIKVKKINGLGYSKLESTF 1045 +K +I +I V++++ S+L T Sbjct: 1077 GRLKGQIAERITVERVSENAESRLSVTI 1104 >UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5S8_9DELT Length = 646 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 118/360 (32%), Positives = 173/360 (48%), Gaps = 21/360 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL G +++DF P GL AITGPTGAGKTTLLDAICLAL+ TPR Sbjct: 1 MKILAVRGKNLASLHGHFEVDFRAPPLDRAGLVAITGPTGAGKTTLLDAICLALFDRTPR 60 Query: 61 LSNVS-------------------QSQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNR 100 +N ++ + AEV+F V + A W R Sbjct: 61 FANRGGVTIGRAPGGAPGEGGLRANDVRGILRHGAVDGWAEVDFLGVDDRVWTARWEVRR 120 Query: 101 ARNQPDGNLQVPRVELARCADGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 AR + DG +Q +++L+ G+ + AD+ D LE GLD+ +F RS+LL+QG+FA Sbjct: 121 ARGRHDGRIQGQQMKLSDAVTGRAVEADRKLDVLEAIEARLGLDFDQFRRSVLLAQGEFA 180 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 AFL A +RAELLE +TGT +Y ++ FE+ K A EL+ L+ + G+ L Sbjct: 181 AFLEASGSDRAELLERMTGTRLYRELGRAAFERAKQADAELDLLRRELDGLDSLDEAART 240 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 L A ++ LT +L A+ Q + W R EL++ A+R + ++ A Sbjct: 241 QLKAQVEALTQARAELTRARAQAEADRTWHARLGELERGAARAKAEVEGAEQALRALDGD 300 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 L + A R E + ++ + L + RA + A + Sbjct: 301 ARTLGWIEAALPWRERAAERGEWTREADEREEERRFITGELGGMVEQRARLVRDGAAREE 360 >UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VXU8_MARMS Length = 1247 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 231/929 (24%), Positives = 384/929 (41%), Gaps = 52/929 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LRLKNLNSLKGEW+IDFT+ PF G+FAI GPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS SQND+MTR T+ECLAEVEFE+KG+ YRAFW Q RAR Q DG LQ EL Sbjct: 61 L-KVSPSQNDVMTRHTSECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCER- 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I+ K+ +K++ A +TGLD+ RFT+SMLL+QG F+AFLNA +RAELLEELTGTE Sbjct: 119 DGTIITTKINEKIDKIAEITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S VF++HK + + L++ LLT E L + +EK + + Sbjct: 179 IYGDVSKWVFDKHKQEKQSIAALESFNEQTQLLTNEAFAELKQTESSFEAKEKANAQSLK 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + L W + +L ++ QQ + +A PQ L A A+ L+P +E+ Sbjct: 239 THRTVLEWRRTEQKLHEQVVIYQQQVDEANQALADFAPQQRQLEQALTAQVLQPDYEKQQ 298 Query: 301 EHSAALAH----IRQQIEEVNTRLQSTMALRASIRHHAA------------------KQS 338 + L I Q E +L+ + L S+ A + Sbjct: 299 GLKSRLDQNQADIAQYTETQQAQLKQSQILTESVEQAKANLVNARTELDALNNKINDEIQ 358 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 L +Q+ R +Q + + ++Q T + + + + + + Sbjct: 359 PILSRQESMKAQHQDVVARLKQASEKVESQQSQLKTVTDKQTDIDKACEDSKAILSRWTS 418 Query: 399 LAAITLTLTA--DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 I L++ + + A L ++ + + A Q ++ Sbjct: 419 PEKIENQLSSWQHQAQSIAANTQAVAELESNIASTTKSYDVARSSCASNQAKLEQDQAGM 478 Query: 457 TQRNAALNEM----------------RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL 500 R AL ++ Y + + + +++ +Q + + ++Q A+L Sbjct: 479 LDRQQALQNTLDTFMQLSSQRDYADWQKSYHQIERAQYNAQSLWKQFHQYQEQQSQLAEL 538 Query: 501 QAGQPCPLCG--STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITK 558 A G + QA + + + E ++ LR +L Sbjct: 539 DAILNAMTNGIQQQQSQLEQQRQAYKDKFRHQKSVEKLAEAERHIVALTQLRNELGEQDA 598 Query: 559 QL---QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL 615 + + A +L Q + +++ + L+ +Q D + Sbjct: 599 CPLCGSAEHDLANALYQADSGSQEEFSRLGKELDSLKGQ--GMQLAADLESMQRELTSGQ 656 Query: 616 SQRHELQGQIAAHNQQIIQYQQQIEQ--RQQLLLTTLTGYALTLPQEDEEESWLATRQQE 673 ++R +L + ++ ++ + Q L Q+ Sbjct: 657 TRRQQLTESLITAENELKEWLASLNHYVNSQDASFNLFDKGQVSSLVQRVNQDWNVLQEI 716 Query: 674 AQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ 733 A + Q L+ +Q L +T+ Q + ++ + + ++ +Q Sbjct: 717 APKLEALQQSRLVLEAELQNLNVRHQTMQQQVTKDESQCQLLWQALETHQQNLISKKGEQ 776 Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 + + Q ++ FD +L ++ Q A + L Q ++ L + Sbjct: 777 EQIIGHLRNEMQQAGVPESYFDLSLTEALVQLQDAMTQWRDSKTGYDALLQQREQLSYEC 836 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL 853 + Q + ++ + A+ + + +L V EQ+ EL Q + Sbjct: 837 QGLQAALKESQQLQAETRDKVVEFDTSLKVIAEQL-HELLGGKSIGELRQEMQSQNDHAH 895 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + ++Q + Q +A +E Sbjct: 896 QMLDKVESERQQVAQALASSNATLEALNK 924 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 232/929 (24%), Positives = 403/929 (43%), Gaps = 63/929 (6%) Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 +L ++I + +ARTEL+ L + + + +S+ A Q + KQ Sbjct: 321 QLKQSQILTESVEQAKANLVNARTELDALNNKINDEIQPILSRQESMKAQHQDVVARLKQ 380 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + +Q L +T + +A +A+ EK + QL++ A+++ Sbjct: 381 ASEKVESQQSQLKTVTDKQTDIDKACEDSKAILSRWTSPEKIENQLSSWQ--HQAQSIAA 438 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ---------Q 345 + + +AE + +A + + + S A + + LQ Q Sbjct: 439 NTQAVAELESNIASTTKSYDVARSSCASNQAKLEQDQAGMLDRQQALQNTLDTFMQLSSQ 498 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA------------- 392 + W + + + + QF Q + L + L Sbjct: 499 RDYADWQKSYHQIERAQYNAQSLWKQFHQYQEQQSQLAELDAILNAMTNGIQQQQSQLEQ 558 Query: 393 -----EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 + K ++ A+ AL Q + + L Q Sbjct: 559 QRQAYKDKFRHQKSVEKLAEAERHIVALTQLRNELGEQDACPLCGSAEHDLANALYQADS 618 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 Q +E ++ L+ ++ + + L ++ + + + Sbjct: 619 GSQ---EEFSRLGKELDSLKGQGMQLAADLESMQRELTSGQTRRQQLTESLITAENELKE 675 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 S +H V + A ++ ++ +L V + + +L+A+ + E E Sbjct: 676 WLASLNH-YVNSQDASFNLFDKGQVSSLVQRVNQDWNVLQEIAPKLEALQQSRLVLEAEL 734 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 Q+L Q + QQ + + Q L+ Q L ++ + Q+ + Q + Sbjct: 735 QNLNVRHQTMQQQVTKDESQCQLLWQALETHQQNLISKKGEQEQIIGHLRNEMQQAGVPE 794 Query: 628 H--NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE-- 683 + + + Q++ + TGY L Q ++ Q + QQ Q E Sbjct: 795 SYFDLSLTEALVQLQDAMTQWRDSKTGYDALLQQREQLSYECQGLQAALKESQQLQAETR 854 Query: 684 ---------LTALQNRIQQLT------PILETLPQSDELPHCEETVVLENWRQVHEQCLA 728 L + ++ +L + + + ++ H V +QV + + Sbjct: 855 DKVVEFDTSLKVIAEQLHELLGGKSIGELRQEMQSQNDHAHQMLDKVESERQQVAQALAS 914 Query: 729 LHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQN 788 ++ + L + + A + A + + L + F+ + +L A + + ++Q +++++ Sbjct: 915 SNATLEALNKTQLSLASEYEAALSHWQKRLAETGFESEVVWLQASLSTEEVSQRQEVQKK 974 Query: 789 LENQRRQAQTLVTQTAETLAQHQQHRP----------DDGLALTVTVEQIQQELAQTHQK 838 L+ + TL+ Q+ E+L +H + + D + ++E+++++ A+ + Sbjct: 975 LQEAVSRLHTLLNQSEESLLKHTESKSKLAVFGGAAFDGSVFEKSSLEELEEKYAELDLE 1034 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 + G I QQ++++ R Q + + LN LIGS +G KFR+F Sbjct: 1035 RQALHRQWGVITQQIQEEVQRRDQVAKSKEALEARRGSFVHLERLNHLIGSADGAKFRRF 1094 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 AQ LTLD+LV+LANQ L LH RY L R +AL + VVDTWQA+A RDT+TLSGGESFL Sbjct: 1095 AQSLTLDHLVYLANQHLDILHRRYQLMRN-EDALSLLVVDTWQANASRDTKTLSGGESFL 1153 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVE 1018 VSLALALALSDLVSHKT IDSLFLDEGFGTLDSETL++ALDALD L++SGKTIG+ISH+ Sbjct: 1154 VSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLESALDALDNLHSSGKTIGIISHIN 1213 Query: 1019 AMKERIPVQIKVKKINGLGYSKLESTFAV 1047 A+KERIPVQIK+ K +GLG S+L + FAV Sbjct: 1214 ALKERIPVQIKLTKQSGLGVSRLSAEFAV 1242 >UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Q89_PSEA6 Length = 1232 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 268/909 (29%), Positives = 408/909 (44%), Gaps = 35/909 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL+ NLNSLKG+WKIDF + PFA NG+FAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S + N++MTR TAEC AEVEFEVKG AYRAFWS R+ +PDG LQ VEL A Sbjct: 61 LGALSANNNEIMTRGTAECSAEVEFEVKGMAYRAFWSMRRSHGKPDGKLQAAVVELGDVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA ++K K EL +TGLD+GRFT+SM+LSQG+FAAFLNA K+RAELLEELTGTE Sbjct: 121 SEKVLASQIKKKSELIEQITGLDFGRFTKSMMLSQGEFAAFLNADEKQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V + + A+ +L +L+AQA GV LL+ +Q Q+L Q L ++K+ Sbjct: 181 IYGLISERVHQHYSQAKQQLAELEAQAKGVQLLSEDQKQALMDEQQDLQGQQKERQIHIS 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +Q+ +NW + D Q + L QA E+E+ + L L+ + P+ LR +E + Sbjct: 241 AKQEHVNWWQQLDSAQSAQQQATLQLTQAQHEKEQQKEALQRLANSHPSEALRAPFELLT 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFR 359 + A + + + + +LQ++ A A + + S E Q + + + + Sbjct: 301 DAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAVSNEFQAIKATYHAQETLLNEEVI 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 +NE + Q +Q + L QL + + + L Sbjct: 361 PLDNEIRQHQDQLTQTNAQHAQLSTKHAQLVQDVENTQTGINSQQQ-SLKQANDYLTARP 419 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA-------------LNEM 466 L+Q+L Q +K Q + QEQ Q + A +N+ Sbjct: 420 SDEALKQYLGQWQLQAQQIKKEQTSYQQLAEKCKQEQRQLHLAQQDAQLNQQQHEKINQQ 479 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 + + + QQ + + E+ I E Q + LQ+ P L + Q E Sbjct: 480 TRELENEFQQQTERLSKLEEHGAIDPQERQLSTLQSLTPSLLALKNTQ-QQWQQQTQELT 538 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE---QALTQQWQA 583 Q++L + K L E ++ Q A ++Q++ Q AL + Sbjct: 539 EKQTQLADNLAQQKNLSNEREVIKRQYLAKSQQVKLLSQLISQEEQLIHFRAALKDEHPC 598 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + D + ++Q L+Q E +I A ++ + ++ QR Sbjct: 599 PLCGAKEHPLTSEMAVDIPDTVTQKQQQESELAQLEEQGKEIRAKLDAFLRGETELRQRI 658 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 L T + T P+ + S L+ +Q Q + L A++N+ Q L+ + Sbjct: 659 DWLSTQQAQLSQTWPEMCQALSPLSDQQTNLQLTIDNADSLIAIENQFNQQIQQLQKQIE 718 Query: 704 SDELPHCEETVVLENWR--------------QVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 + V E W+ + L + Q L A ++L Sbjct: 719 KLKTQARTLLVSKEKWQHSQSQSQSASSALLLAQQSAKNLENSAQNLSNDIQQAGETLTS 778 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 T +Q + +A L+ T + + + + +R T+ + Q Sbjct: 779 LSQSLLTHIQQHGYTPPEA--DNLLQWLTSKEQDAKQWEHHDNQRNEATVQIDKLTSAQQ 836 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 HQ D + +EQ +Q L + L S + + + +TL + Sbjct: 837 HQLSLSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSLFADKSVKTERETLSETLRTLEAR 896 Query: 870 IAQMTQQVE 878 QQ+ Sbjct: 897 HEHAQQQMR 905 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 276/954 (28%), Positives = 421/954 (44%), Gaps = 107/954 (11%) Query: 191 EQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLT 250 E ++ L QAQ + Q L S L + + + Q Sbjct: 290 EALRAPFELLTDAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAVSNEFQAIKATYH 349 Query: 251 RQDEL-QQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHI 309 Q+ L +E ++Q + + Q A LS + + + Sbjct: 350 AQETLLNEEVIPLDNEIRQHQDQLTQTNAQHAQLSTKH-----AQLVQDVENTQTGINSQ 404 Query: 310 RQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWR 369 +Q +++ N L + + +++ + + + QQ ++ ++ Q ++ +Q + + Sbjct: 405 QQSLKQANDYLTARPSDE-ALKQYLGQWQLQAQQIKKEQTSYQQLAEKCKQEQRQLHLAQ 463 Query: 370 AQFSQQTSDREHLRQWQQQLTHA-EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHL 428 E + Q ++L + +Q+ L+ + D L+ P L Sbjct: 464 QDAQLNQQQHEKINQQTRELENEFQQQTERLSKLEEHGAIDPQERQLSTLQSLTPSLLAL 523 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA 488 Q Q + L + Q + + +Q + ++++Y K+QQ+ + + QE Sbjct: 524 KNTQQQWQQQTQELTEKQTQLADNLAQQKNLSNEREVIKRQYLAKSQQVKLLSQLISQEE 583 Query: 489 RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAT 548 + L RA L+ PCPLCG+ HP A++ ++ E+E+ +L E+G Sbjct: 584 Q---LIHFRAALKDEHPCPLCGAKEHPLTSEM-AVDIPDTVTQKQQQESELAQLEEQGKE 639 Query: 549 LRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQD-- 606 +R +LDA + L + L+Q W + +L+ ++Q +D D Sbjct: 640 IRAKLDAFLRGETELRQRIDWLSTQQAQLSQTWPEMCQALSPLSDQQTNLQLTIDNADSL 699 Query: 607 --------------------------------------------EHERQLRLLSQRHELQ 622 L L+ Sbjct: 700 IAIENQFNQQIQQLQKQIEKLKTQARTLLVSKEKWQHSQSQSQSASSALLLAQQSAKNLE 759 Query: 623 GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ---- 678 + I Q + + Q LLT + + T P+ D WL +++Q+A+ W+ Sbjct: 760 NSAQNLSNDIQQAGETLTSLSQSLLTHIQQHGYTPPEADNLLQWLTSKEQDAKQWEHHDN 819 Query: 679 ------------------------QRQNELTALQNRIQQLTPILETLPQ------SDELP 708 +++LTA++ + Q L LE+L +D+ Sbjct: 820 QRNEATVQIDKLTSAQQHQLSLSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSLFADKSV 879 Query: 709 HCEETVVLENWRQVHEQCLALHSQ--------------QQTLQQQDVLAAQSLQKAQAQF 754 E + E R + + Q Q Q Q L+ Q ++ Sbjct: 880 KTERETLSETLRTLEARHEHAQQQMRQKEQEHNTHLANVQNAQTQLQQNQTRLKTRQNEW 939 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 T L AS F DQQAF AAL+DE T L+ LKQ L++ + Q L+ Q + H Sbjct: 940 QTKLLASPFADQQAFEAALLDEATRATLQTLKQTLDDNLAKYQALLEQANTQVKTLLAHN 999 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 L T + + + L ++ + +GEI Q L D +QQ+L QI Sbjct: 1000 NATQWQLQ-TRDAVIEALNALTEEQHKGNKREGEISQALNFDKQRSSEQQSLFSQIELQR 1058 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEV 934 + E YL+SLIGS++GDKFR FAQGLTLDNL++LAN+QL RLHGRYLL+RKA +L + Sbjct: 1059 NEFEHIHYLHSLIGSQKGDKFRTFAQGLTLDNLMYLANKQLERLHGRYLLKRKADASLAL 1118 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETL 994 V+DTWQ D RDT+TLSGGESFLVSLALALALS+LVSHKT IDSLFLDEGFGTLDSETL Sbjct: 1119 SVIDTWQGDIQRDTKTLSGGESFLVSLALALALSELVSHKTSIDSLFLDEGFGTLDSETL 1178 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 D ALDALD L+ASGK IGVISHVEAMKERI Q+ V K +GLG S+L+ +AV+ Sbjct: 1179 DIALDALDNLHASGKMIGVISHVEAMKERIVAQLAVTKKSGLGVSELDQRYAVR 1232 >UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium botulinum RepID=B2UXL2_CLOBA Length = 1180 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 208/1197 (17%), Positives = 462/1197 (38%), Gaps = 178/1197 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E KIDF + G F I GPTG+GK+T+LD I LALY + R Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFNK--LTERGFFGIFGPTGSGKSTILDGITLALYGQVSR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFW-SQNRARNQPDGNLQVPRVELARC 119 S ++ + + +F++ G + + S+ R+ GN + R ++ Sbjct: 59 KS------SNYINTNCDSLNVSFKFQISGVEKKIYIVSREFKRDNKTGNPRTSRAKIIDT 112 Query: 120 ADG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +G +ILADK + E + GL FTR+++L QG+F+ FL + K R E+LE L Sbjct: 113 TNGIEEILADKAQKVTEKCEEIIGLGLEDFTRTVVLPQGKFSEFLKLEGKSRREMLERLF 172 Query: 178 GTEI-----------------------------YGQISAMVF----EQHKSARTELEKLQ 204 + Y ++S+ F E+ + AR +L Sbjct: 173 NLQKYGNILSIKLSREIGKEKTESNLLTGELKGYDEVSSEKFNLKNEELECARNQLSNAN 232 Query: 205 AQASGVTLL--TPEQVQSLTASLQVLTDEEKQLITAQQQEQQSL---------------- 246 + + + E++ +L L ++EK L + ++ Sbjct: 233 NELKEIEKKYKSSEEIWNLQFELNSYKEQEKVLNYKSSEIEEDKIKLKLAEAALKVNPYV 292 Query: 247 ----NWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ----PARNLRPHW-E 297 N L +E+Q+E + ++ E E ++ +L ++ + P LR Sbjct: 293 LAYENTLNEGNEIQKEKESLEINFKKLKVERESSEKKLLEITEKKDKEIPELKLREQKVS 352 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + E L + ++IEE+ +++Q ++++ ++ ++ ++ + Sbjct: 353 DVIEEKNKLDILDKEIEEITSKVQVLREKYKKEKNNSVIIEDSIRNTTINIKELEEKFES 412 Query: 358 FRQWNNEPAGWRAQF----------SQQTSDREHLRQWQQQLTHAE------QKLNALAA 401 + + A + ++++ L +++ + + QK+ + + Sbjct: 413 LKIDDELKAKIQNGLLITEKYNLFKKNISNNKNKLTNINKEIENLKVNFDELQKIYKVKS 472 Query: 402 ITLTLTADEVATALAQ----HAEQRPLRQHLV----------ALHGQIVPQQKRLAQLQV 447 +L DE+ + + L+++L +I + + +L+ Sbjct: 473 NSLNKNKDELENLIKHCPGNQEDLLILQKNLTNCNEKWEKFNQYSDEIKKSKLLIKELEE 532 Query: 448 AIQNVTQEQTQRNAALNEMRQRYK----------------------------------EK 473 ++ ++ + L +++++YK +K Sbjct: 533 LLKKGKDKKFSIDNELLDLKEKYKKCEIENLAFKIRMNLKNGEACPVCGSLEHDTKSKDK 592 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV------------EAYQ 521 D + + +I E L+ S E ++ Sbjct: 593 LIDDIDDDIVNQLNNKINEYEINLKVLEQDITIYNTKINSEEDKIREKNLQIENLGEEFK 652 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + P +S+ L+ +++ + L L + + + EN+++ + + Q Sbjct: 653 NIVPKDLESQFNRLKKDLENYDLKKEILENTLIQLKDENHKLENDSEIISTLIKEKETQV 712 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + L I ++ L++ + L+ + + E+ I + + + ++ Sbjct: 713 NLINEELAIDIEELNNTKEKLNIIIRETKVSDFNKKSQEIVN-IEKEREILSKKIKEFRI 771 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLAT--------RQQEAQSWQQRQNELTALQNRIQQ 693 + L+ L EE + T R+++ + + + + L + Sbjct: 772 NIETLIKEKDQVQENLNLITEEGTHARTSLNEKNKNREEKIKIIKDKLEKEFNLIDDSNN 831 Query: 694 LTP-----ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 + +L+++ + E E + E + + + + + ++ ++ + + Sbjct: 832 IDENKLFMLLDSIKKEIECIEKEFKSIHELKDIICIKYESCNEKFISIVAKENQIIKRCE 891 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + + +L++ F+ + A ++ + L+ + + + + + + + L Sbjct: 892 IEKENLNKSLKSENFESIEEVKANIIGFNDIEILKAKIEKYKEDLSKIKGAIESSVKKLN 951 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + IQ + + + + ++ ++ K + ++ + L+ Sbjct: 952 NRE--------VTEQQWINIQNSVKEKKLEFESLNEMKIKLEEECKFIDNKLKELKDLLI 1003 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK 927 + ++ ++ L+ +G KF +F L + A+++L + +G Y L+ Sbjct: 1004 KKEKIDHKLALLDDLDK---LFKGKKFVEFVAITQLKYISMEASKKLKDITNGIYGLE-- 1058 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEG 985 E + + D A RD TLSGGE+FL SLALALALS + ++ FLDEG Sbjct: 1059 VDENGKFIIRDYKNGGAERDASTLSGGETFLTSLALALALSSQIQLKGTAPLELFFLDEG 1118 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKL 1041 FGTLD + L+ + +L+ L+ IG+ISHVE++K R+PV++ + +G G SK+ Sbjct: 1119 FGTLDDDLLEVVMSSLEKLHNDKLKIGIISHVESIKNRVPVKLILTPAESGKGGSKV 1175 >UniRef50_C5CAA1 Exonuclease SbcC n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CAA1_MICLC Length = 1009 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 203/1070 (18%), Positives = 356/1070 (33%), Gaps = 113/1070 (10%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 +RL+ L +DF R + GLF + GPTGAGK+T+L A+C ALY P + Sbjct: 1 MRLEGLGPYAQAQDVDFDR--LNAGGLFLLDGPTGAGKSTVLAALCFALYGTVPGGRSAE 58 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-------LQVPRVELAR 118 L +VEF V+G + S R + + V L Sbjct: 59 SLVTTLREPGAVIPEVQVEFTVQGRRFEVVRSPKHERPRRRRSAAGGATVTTQATVSLRE 118 Query: 119 CADGKILA--DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 DG+ A + + + A + LD +F + +LL QGQFA FL AK ER LL L Sbjct: 119 RVDGEWTAPLTRADEVGQQIAAVLHLDAEQFMQVVLLPQGQFAQFLIAKSDERRVLLRRL 178 Query: 177 TGTEIYGQISAMVFEQHKSART--------------ELEKLQAQASGVTLLTPEQVQSLT 222 GT+ + + + + T +L + +A G PE Sbjct: 179 FGTQRFDGVEEHLRVETARLDTAVAVDADAARTARAQLAEALHEALGPDWHAPEPSPDTD 238 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 L VL E A + + L ++ + R + + LA E + Sbjct: 239 DRLLVLAAERAGR--AHEDARAGLATARAAEQRARVTVRELETRGRDLAAAEAWASRRRD 296 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 R E + + Q+ +T + H + Sbjct: 297 HDAEAETAAARRRAVDAHERAGRVLTAGQRATAAADAAGTTSEAVTEVLAHVEDEPTAAA 356 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 + + R+ E ++ DR+ +R+ +Q+ A ++ + Sbjct: 357 WLAAARADGAADAPASRRALGEAERAAEAVARSVRDRDRMRELEQEAAAAAERRAEIDRD 416 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVAL-HGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L A A + + + L + V + A + + Sbjct: 417 RAALVESRPEREAAVAALRSAVERGTERLGVREAVDRAVDEAAARRTAAEAAAARAVEVE 476 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + +E+ + A+ + + +L G+PC +CGS HPA A Sbjct: 477 TAARAHREAQERRSEAAERHVGLLRARYEQAASELAERLVPGEPCAVCGSPEHPAPAA-- 534 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + V ++ + E L A + L+ A L + Sbjct: 535 TADTTVTEADVRDAEQARTAADRAATDAETALRAAEQTLRTAREAAAGLAPEAAR----- 589 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 +A D E + L Q + + ++ Sbjct: 590 ---------------------EALDRAEAERAALDQAAKDLAADRRRLAAAEKEHAGADE 628 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L A S L + A+ Sbjct: 629 TAATLTAEDGRLAEAAAHRAARLSELRDAVEAARG------------------------- 663 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + L+ R + + Q +D A + AL Sbjct: 664 ----------DAETLDARRDQVTAARRVLAALAAAQDEDARARAVADETGQALTAALAEQ 713 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 FDD A AA ++E Q + +R + + + + + Sbjct: 714 HFDDVDAARAARLEETEAAARTAAVQEWDAER----ARLAELEASEPVRRGRALAEAGVE 769 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 T EQ + +++ + + A R+Q L + + + + + Sbjct: 770 PPTEEQTRAAAEALAAAEAASSSRATAVGRLDSLVATVRRQSAALTEVLERSAGLIAEHT 829 Query: 882 YLNSLIGSKEGDK-------FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------K 927 + L+ G + L+ + A ++L + RY ++ + Sbjct: 830 RVRGLLDLVRGGGENLLKMPLTSYVLAGRLEEVAAAATERLLAMTDQRYSIEYSDAVGGR 889 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 ++ LE+ + D + D R TLSGGE+F+ SLALAL L+D V + +D+LF+DE Sbjct: 890 GNKGLELVIRDHYV-DETRHPATLSGGETFMASLALALGLADTVQAEAGGIELDTLFVDE 948 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 GFG+LD++TLD LD +D L G+T+G++SHVE M++ I V+++V+K Sbjct: 949 GFGSLDADTLDDVLDVVDTLRTGGRTVGLVSHVERMRQEIGVRLEVRKDR 998 >UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QNJ6_CHLP8 Length = 1226 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 210/917 (22%), Positives = 359/917 (39%), Gaps = 43/917 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR NLNSL+GEW+IDFTR + ++G+FAITGPTG+GK+T+LDAICLALY ETPR Sbjct: 1 MKILTLRFANLNSLQGEWQIDFTRPEYVADGVFAITGPTGSGKSTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ S N++M+R EC AEV F +R WSQ+R+R +P G LQ + E+A A Sbjct: 61 LGKITVSSNEIMSRHAGECFAEVTFAAASGTFRCTWSQHRSRKKPGGALQAQKHEIADAA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G I+ +V++ TG+D+ RFTRSMLL+QG FA FL A +RA +LE++TGTE Sbjct: 121 TGAIIQSRVQETRLEVEARTGMDFDRFTRSMLLAQGDFAKFLQADADQRAPVLEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ ++ L++L+ + G+ LL E++ +L A ++E ++ + + Sbjct: 181 IYSLISMKVHERKRAELERLQRLEIEVGGIRLLGAEELAALEAERSEALEQEAKMSASLE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +L WL L++ + + + E E L AQ A + + + Sbjct: 241 SDSAALRWLEEIARLEEAVAANSREAEALNTEREAFAADARRLERAQTAALIEVAYAEVR 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 L ++ + + + QQ+L RQ Sbjct: 301 LMREELQRNAGELAGKEVQHPESERAVREAGEAFEAAERGVASAQQALQDGRPLIAHARQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA- 419 + + AG + + D E L + Q QL +++ + A Sbjct: 361 LDEQIAGKSGEVERLQHDAETLEERQAQLRSERAEVSTALGSIRIALQNLQAWQNQHQTD 420 Query: 420 ---------------EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 E RP + VA I Q L LQ + + +A + Sbjct: 421 ASLAGALSGIRHALDELRPAAEREVAAASGITDTQHNLEVLQGELVLAEADARASQSAFD 480 Query: 465 EMRQ---RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + R + KE D ++ + L + QL+A G P ++ Sbjct: 481 DARMALGKMKESFALQLDGASLSSLRGELDRLRERHRQLEAIVALYAEGKQFVPKIDKI- 539 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ-- 579 +E + R L + + L ++L R + +SL ++ + L Sbjct: 540 WVEIQQTERRQEELSLKFDHARQLLEHAERDL-VSQEELARLADRVRSLEEERERLVDGQ 598 Query: 580 ----------QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 W + L Q + Q+ + L + +I Sbjct: 599 PCPLCGSPSHPWADGASELLERSQEALH-EARRIVQERSKALKELELALAKTGTEIDERR 657 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE---ESWLATRQQEAQSWQQRQNELTA 686 + + + + E + L L + +P + E E L + + R +L Sbjct: 658 KSLQELAELRESSGRKCLALLKEVGVNVPAREAEPVVEEALQQTASQRDALAGRIEQLET 717 Query: 687 LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 L+ RI+ + L ++ V E R + L + QQ +S Sbjct: 718 LEQRIRDHEADVAQLNETAHTAQRRLEQVTERQRSLLLDLARLKKELGLAQQNVAERQRS 777 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAAL-MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 + F DD ++AL + E+ + LE + Q+ + + Sbjct: 778 FSRLVEPFGVR----EIDDPAEIVSALALRSTEWASNEKRIRTLEQEELAGQSRLKNLDD 833 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 LA + + V ++ ++ L+ + E R + + R + Sbjct: 834 QLATISADFLEKDRDVKAAVTSLEALKSKRAGVLQGHDPDVEEERLE-RTLQAARTKLDE 892 Query: 866 LMQQIAQMTQQVEDWGY 882 L ++ + + Sbjct: 893 LTEKRNAAREALSVLET 909 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 185/884 (20%), Positives = 345/884 (39%), Gaps = 52/884 (5%) Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 + + EQ E+E+LQ A + E+ L + ++ + A Q Q Sbjct: 358 ARQLDEQIAGKSGEVERLQHDAETL----EERQAQLRSERAEVSTALGSIRIALQNLQAW 413 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEE------------KAQPQLAALSLAQPARNLR 293 N L S + AL + E + ++ L + R Sbjct: 414 QNQHQTDASLAGALSGIRHALDELRPAAEREVAAASGITDTQHNLEVLQGELVLAEADAR 473 Query: 294 PHWERIAEHSAALAHIRQQ--IEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 + AL +++ ++ L S +R +Q + + Sbjct: 474 ASQSAFDDARMALGKMKESFALQLDGASLSSLRGELDRLRER-HRQLEAIVALYAEGKQF 532 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + + D+ + + + S + L + ++ ++++L LA +L + Sbjct: 533 VPKIDKIWVEIQQTERRQEELSLKFDHARQLLEHAERDLVSQEELARLADRVRSLEEERE 592 Query: 412 ATALAQ---------HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 Q H + L + ++ + + A++ + + Sbjct: 593 RLVDGQPCPLCGSPSHPWADGASELLERSQEALHEARRIVQERSKALKELELALAKTGTE 652 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 ++E R+ +E + C + + + + L + S A + Sbjct: 653 IDERRKSLQELAELRESSGRKCLALLKEVGVNVPAREAEPVVEEALQQTASQRDALAGRI 712 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 + + R+ E +V +L E T + +L+ +T++ + + L+++ Q Sbjct: 713 EQLETLEQRIRDHEADVAQLNETAHTAQRRLEQVTERQRSLLLDLARLKKELGLAQQNVA 772 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 S + ++P +R + E+ +A + + +++I Sbjct: 773 ERQRSFSRLVEPFG---------------VREIDDPAEIVSALALRSTEWASNEKRIRTL 817 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ---LTPILE 699 +Q L + Q + + ++ ++ L + + + Q E Sbjct: 818 EQEELAGQSRLKNLDDQLATISADFLEKDRDVKAAVTSLEALKSKRAGVLQGHDPDVEEE 877 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L ++ + + + E E L + L Q L++ + F L+ Sbjct: 878 RLERTLQAARTKLDELTEKRNAAREALSVLETAIAGLHQALQERRLVLERREEAFTLELK 937 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 F + FL A + +LEQ +L + + + + L + ++ + Sbjct: 938 QKGFIGEAVFLEARLPIGERQKLEQKADSLNKRAHELEARRKERQTKLHEVRERQLTS-- 995 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 + E++ + +A+ ++LRE G I QL+++ + + + + + Sbjct: 996 ---ESNEKLSERIARRQEQLREVRGRIGAIANQLRENEQAAGEHRIKLHAVEAQKSEYRR 1052 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 W L+ LIGS +G KFR FAQG+T + ++ AN+QL ++ RY L + LE+ V+D Sbjct: 1053 WELLHDLIGSVDGKKFRNFAQGITFELMISHANRQLRQMTDRYQLLHDPNNPLELSVIDQ 1112 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALD 999 WQA VR TR LSGGESF+VSLALAL LS + S R+DSLFLDEGFGTLD E L+TALD Sbjct: 1113 WQAGEVRSTRNLSGGESFIVSLALALGLSQMSSRNVRVDSLFLDEGFGTLDEEALETALD 1172 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L L SGK IGVISHV A++ERI I+V G G S +E Sbjct: 1173 TLAGLQQSGKLIGVISHVAALRERISTHIRVAPKTG-GRSSIEG 1215 >UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=A5WEF8_PSYWF Length = 1346 Score = 292 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 213/902 (23%), Positives = 363/902 (40%), Gaps = 27/902 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW+IDF+ E + + G+FAI G TGAGKTT+LDAICLALY ETPR Sbjct: 1 MRLIELRLKNLNSLKGEWRIDFSDEAYINEGIFAIIGHTGAGKTTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +SN+S+S N++MTR T ECLAEV ++ G YR W Q RA +PDGNLQ EL+ + Sbjct: 61 ISNISKSTNEVMTRQTGECLAEVVIDINGTHYRCHWYQRRAHGKPDGNLQDATHELSLAS 120 Query: 121 D------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D G +L +K + LT +D+ +FTRS+LL+QG FAAFL+AK ERA++LE Sbjct: 121 DHEGQKAGTVLEEKSSLTKKRIVELTRMDFQQFTRSILLAQGSFAAFLSAKADERADILE 180 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 ++TGT+IY IS V E+ + L LQ + G+ LL E L L+ T + Sbjct: 181 KITGTDIYATISERVHEKKRQEEALLNTLQTKLQGLELLDVEAETQLKQQLEANTKQLTD 240 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 Q + L W+T ++L ++ + ++ + + L A A + Sbjct: 241 HRAIVSQLEDQLTWITEVEQLTEQVVTLNADVAVSIQAKTAFEEDAKRLERANKALEIES 300 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 H+ ++ A+ + Q++ ++ + + Q LN L Sbjct: 301 HYTQVCNLRASKHQLDQELSNKQQQIPVLQQQLDEQQTQMTQAQKREASANQVLNDTLPV 360 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT--LTADEVA 412 ++ RQ +N+ + QQ + +Q + +L + + T D Sbjct: 361 IEQTRQLDNQIEQTQLTLKQQQQLQHTHQQSLAEFKATITRLISDKSQTQQQLAEVDSYL 420 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 H++ L L + + + +L QE LN ++Q Sbjct: 421 QQYQHHSQLNVDISGLNTLGLTLKAELENNYKLYQQQHLKEQENKDLTQQLNALKQ---- 476 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQP-CPLCGSTSHPAVEAYQALEPGVNQSR 531 +Q + ++A++ L + L GQP L H + Q + Sbjct: 477 --EQATNQALYETKQAKLNELYHAQQALLQGQPLAALRQQQEHSDALSTQLSILQQHLDN 534 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L ++ + + +++ E + + L +Q Q + + + Sbjct: 535 KAELATQISAEKAVTTQFDSDMADLKSVIEQAEQDLEMLNCHQQDKQSQVEQQQKIIELE 594 Query: 592 LQPLDDIQPWLDAQ-------DEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 + D I+ Q EH S E ++ ++ Q +I + +Q Sbjct: 595 AKLEDYIELLAHNQPCPLCGSTEHPSVANKKSNSSEAHTKLHQLKDELSQIVAKINRAKQ 654 Query: 645 LLLTTLTGYALTLPQEDEEESWL-ATRQQEAQSWQQRQNELTALQNRIQQLTPILET--L 701 L Y T ++ + + L Q+ + Q + L ++ +L+ L Sbjct: 655 NLDDAKLAYKNTEYKQQQSHAQLTNQLQRLNTTLSQILSHANTLSEQLSAAPTVLQQQLL 714 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 S L + Q +Q A L+ + A Q +Q Q + L Sbjct: 715 NSSAHLHETDPQSSHPKNHQNDQQPAAPKPAL-LLKLSQLTAGFDSQPSQQQLEALLAKG 773 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + A Q++Q + ++ Q T + + + + Q + Sbjct: 774 KQITACIYDAQQRLHHQKQQIKQSLEE-QDALTQQITDIEKRHKVIEADNQRLMMHIKDI 832 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + Q + Q + + + GE QQL+ D + + +T + Sbjct: 833 EAKQQLNQHSITQATAFIDQGFSKLGESAQQLQGLLDKYKDSAAINDASQTLTDCEQSLA 892 Query: 882 YL 883 L Sbjct: 893 QL 894 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 203/900 (22%), Positives = 361/900 (40%), Gaps = 88/900 (9%) Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 L + K +EQ++ + + + L+QE + Q + A+ + AL Sbjct: 445 AELENNYKLYQQQHLKEQENKDLTQQLNALKQEQATNQALYETKQAKLNELYHAQQALLQ 504 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEE-------------VNTRLQSTMALRASIRH 332 QP LR E S L+ ++Q ++ V T+ S MA S+ Sbjct: 505 GQPLAALRQQQEHSDALSTQLSILQQHLDNKAELATQISAEKAVTTQFDSDMADLKSVIE 564 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT--------------SD 378 A + L QQ + +++ + + + + + + Sbjct: 565 QAEQDLEMLNCHQQDKQSQVEQQQKIIELEAKLEDYIELLAHNQPCPLCGSTEHPSVANK 624 Query: 379 REHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQ 438 + + + +L + +L+ + A + LA + +Q L Q+ Sbjct: 625 KSNSSEAHTKLHQLKDELSQIVAKINRAKQNLDDAKLAYKNTEYKQQQSHAQLTNQLQRL 684 Query: 439 QKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRA 498 L+Q+ ++++ + L + + + + + A + Sbjct: 685 NTTLSQILSHANTLSEQLSAAPTVLQQQLLNSSAHLHETDPQSSHPKNHQNDQQPAAPKP 744 Query: 499 QLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ--SRLLALENEVKKLGEEGATLRGQLDAI 556 L G S P+ + +AL Q + + + + ++ + DA+ Sbjct: 745 ALLLKLSQLTAGFDSQPSQQQLEALLAKGKQITACIYDAQQRLHHQKQQIKQSLEEQDAL 804 Query: 557 TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDA----QDEHERQL 612 T+Q+ E + + D Q L + + A + + ++D E +QL Sbjct: 805 TQQITDIEKRHKVIEADNQRLMMHIKDIEAKQQLNQHSITQATAFIDQGFSKLGESAQQL 864 Query: 613 RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ----------------------------- 643 + L +++ I +Q + +Q + Q + Sbjct: 865 QGLLDKYKDSAAINDASQTLTDCEQSLAQLRHCMNNQQHLDDKQCYDSLQPLRNLSQWMG 924 Query: 644 ---QLLLTTLTGYALTLPQEDEEESWLATRQQEAQ-----------SWQQRQNELTALQN 689 + L + ++ L + Q +A + Q +E+T LQ+ Sbjct: 925 ALNNSYVAKLASKQQLFTEIQTLDTQLKSNQAQADKEHSQLALLTDTIHQLSHEMTQLQS 984 Query: 690 RIQ------QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 R + Q+ L + + + + + Q L ++ L+ Q Sbjct: 985 RRRDLFGDKQVNSEDSRLRAALDSAKDQLNQINKEHSHTQHQLSTLQAESLRLEAQLSEL 1044 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 L + + T L A FD + +LAA + ++ L Q +Q + N AQ + Sbjct: 1045 QSQLAQQEHALSTQLVAHDFDSEADYLAARLPKEQRDALNQRQQEIVNALNYAQNALKTV 1104 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 +HQ T T E +Q + Q + E G I QQL+ + + Q Sbjct: 1105 -----EHQLQHKTANPQTTDTKENLQAQRQQQQDLVDELIEQVGGINQQLQTNEARKTDQ 1159 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL 923 ++ +++IA+ Q+++ W L LIGS +G K+R FAQGLT + +V AN QL ++ RY+ Sbjct: 1160 RSQLEKIAEQKQKLKVWQELYGLIGSADGKKYRTFAQGLTFEIMVSNANTQLRKMSDRYI 1219 Query: 924 LQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLD 983 L R + LE+ V+D +Q +R T+ LSGGE FL+SLALAL LS + S R+DSLFLD Sbjct: 1220 LVRDENSPLELNVIDDYQGGLIRSTKNLSGGEGFLISLALALGLSSMASQNIRVDSLFLD 1279 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFGTLD ++LD AL+ L L GK IG+ISHV+A+K+RI QI+V K++G GYSKL Sbjct: 1280 EGFGTLDEDSLDVALNTLTNLQQEGKLIGIISHVQALKDRIHTQIRVDKLSG-GYSKLSG 1338 >UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYK7_9GAMM Length = 1261 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 238/910 (26%), Positives = 378/910 (41%), Gaps = 63/910 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR +NLNSL+GEW+IDF +A G+FAITG TGAGK+T+LDAICLALY TPR Sbjct: 1 MRILKLRFQNLNSLQGEWEIDFRHAAYADEGIFAITGSTGAGKSTILDAICLALYGATPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++QS+NDLM+R T ECL+EV F K +YR W Q RAR P+GNLQ P E+A Sbjct: 61 LGEITQSKNDLMSRHTGECLSEVIFTTKSGSYRCTWLQKRARKNPEGNLQSPTHEIAPFT 120 Query: 121 DGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 D L + + +L A TG+D+ RFTR+MLL+QG FAAFL A ER+ LLEE+ Sbjct: 121 DDAADLPPLETQTRKTRKLVAEFTGMDFDRFTRAMLLAQGSFAAFLQANSDERSNLLEEI 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGTEIYG IS V E + EL+ L + SG+T+L+ E+V SLT+ L D + Sbjct: 181 TGTEIYGDISKKVHEFKTQSDAELKTLTDRLSGMTVLSDEEVHSLTSQKNALVDIVNETK 240 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 TA + + W D + + + + +E + PQ L A A + Sbjct: 241 TAMTKIESDKLWRQNLDAYTHQIHKLKHEARDLAEQESQFSPQKIQLQRALKALEVSGDI 300 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 +++ L+ + RL + + + ++ A+ QQ + + Sbjct: 301 KKLDYQRDLLSTQLSDLASYQHRLPTAEHHCQLAQKNQDERQAKAQQTENDWQQAQPLLN 360 Query: 357 RFR----------QWNNEPAGWRAQFSQQTS------------------DREHLRQWQQQ 388 + R Q+ E A +Q S++ + +RE L Q QQQ Sbjct: 361 QVRKLDTTLGQKNQYAQEIAQQLSQLSEELAHNAQSIDSQQQQLVSQQVEREQLIQAQQQ 420 Query: 389 LTHA------EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRL 442 + HA L L + TL+ A A Q Q +++ + Sbjct: 421 IPHATTLPQTLASLTQLQETSQTLSEQLQAFASQQQQLQGEFKRNEQQASALQSQLTQLQ 480 Query: 443 AQLQVAIQNVTQEQTQRN--------AALNEMRQRYKEKTQQLADVKTICEQEA-RIKTL 493 +Q+ QN+ + +Q + AAL + + Y + QQLA +++ + ++ Sbjct: 481 SQISEHRQNLESQTSQLHHLTQGQSAAALRQQVETYWQTDQQLAAIQSDVQTWQTNLQHY 540 Query: 494 EAQRAQLQAGQP--CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG 551 + QL GQ + + A + +R L L +++ L +E LR Sbjct: 541 QQFVQQLADGQTQLAQIASQRLTMEQQQQAAEQTVDLLNRNLILLAKIQDLTDERDKLRH 600 Query: 552 QL------DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ 605 Q Q+ + L L + + Sbjct: 601 GEPCPLCGSTAHPFATHQPYTPDDTEQQLAIAKQRLDNINHQLQQLLLEEHALTNSQQQR 660 Query: 606 DEHERQLRLLSQR----HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED 661 +E+ + L+ +QR +L Q H Q + Q + + + Sbjct: 661 NENLQHLQAHNQRLLNQLQLASQYLIHAQPVQQAIEALPPVAAPSTDDDIDHQALQRLAT 720 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 ++ QQ + Q ++ A+Q+ QQ L +L + ++T++ + Sbjct: 721 IIKAEQTNNQQSLAALQDSLTQIEAVQSEQQQTQQRLASLSEQYNDVLQQQTLLHNQQQH 780 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE-QTLT 780 ++ + +QQ + + Q + K F T + F Q A L TL Sbjct: 781 RQDRIRGIDAQQLVIADKQHQVIQRIDKLLMPFATRERTFSFATTQDVNAQLNQHIDTLA 840 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQH---QQHRPDDGLALTVTVEQIQQELAQTHQ 837 QL Q Q LE + +T +TL + QQH + + + QE++ Sbjct: 841 QLLQRYQGLETKLSHINDTITGIEQTLTRLVADQQHLTQNQHQARQRQQALAQEISDLQA 900 Query: 838 KLRENTTSQG 847 + Q Sbjct: 901 QRYALFGEQA 910 Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 218/880 (24%), Positives = 358/880 (40%), Gaps = 71/880 (8%) Query: 196 ARTELEKLQAQASGVTLLTPE--QVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQD 253 R +L + Q Q T L + L + Q L+++ + + QQQ Q +Q Sbjct: 410 EREQLIQAQQQIPHATTLPQTLASLTQLQETSQTLSEQLQAFASQQQQLQGEFKRNEQQA 469 Query: 254 ELQQEASRRQQA-LQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQ 312 Q + Q+ + + E QL L+ Q A LR E + LA I+ Sbjct: 470 SALQSQLTQLQSQISEHRQNLESQTSQLHHLTQGQSAAALRQQVETYWQTDQQLAAIQSD 529 Query: 313 IEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQF 372 ++ T LQ + Q A++ Q+ ++ Q ++ N A+ Sbjct: 530 VQTWQTNLQHYQQFVQQLA-DGQTQLAQIASQRLTMEQQQQAAEQTVDLLNRNLILLAKI 588 Query: 373 SQQTSDREHLR------------------------QWQQQLTHAEQKLNALAAITLTLTA 408 T +R+ LR +QQL A+Q+L+ + L Sbjct: 589 QDLTDERDKLRHGEPCPLCGSTAHPFATHQPYTPDDTEQQLAIAKQRLDNINHQLQQLLL 648 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 +E A +Q L+ + H Q + Q +LA + Q+ + + Sbjct: 649 EEHALTNSQQQRNENLQH--LQAHNQRLLNQLQLASQYLIHAQPVQQAIEALPPVAAPST 706 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 Q L + TI + E A LQ + Sbjct: 707 DDDIDHQALQRLATIIKAEQTNNQ--QSLAALQD------------------SLTQIEAV 746 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 QS + + L E+ + Q + Q Q ++ + + + + + V + Sbjct: 747 QSEQQQTQQRLASLSEQYNDVLQQQTLLHNQQQHRQDRIRGIDAQQLVIADKQHQVIQRI 806 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 + L P + + +L L Q++Q Q +E + + Sbjct: 807 DKLLMPFATRERTFSFATTQDVNAQLNQHIDTLA--------QLLQRYQGLETKLSHIND 858 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ-NELTALQNRI------QQLTPILETL 701 T+TG TL + ++ L Q +A+ QQ E++ LQ + Q + + L Sbjct: 859 TITGIEQTLTRLVADQQHLTQNQHQARQRQQALAQEISDLQAQRYALFGEQAVDIVSHAL 918 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 Q+ + + + + Q L Q +L + Q Q Sbjct: 919 VQAKNQALQDYQISQTAFHEQLSQLQILQQQIASLTTSTNHLKTAQQTLQDDIQQRFATL 978 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F D + A++ + +L+QL L + +++ L+++ Q H Sbjct: 979 GFVDDADYRTAVLVDTERERLQQLANQLHDSQQRNHNLLSEAKRIQQQLLNH-----PQT 1033 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 +++EQ+ L Q Q+ E G + QQL + +Q QQ L+ I Q E+W Sbjct: 1034 ALSLEQLLDALGQLQQQFSEQQKQLGAVEQQLAANEALKQNQQQLLDAINQQRNHTEEWK 1093 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 L+ LIGS +G KFR FAQGLT + +V AN+QL ++ RYLL + + L + V+D +Q Sbjct: 1094 VLHQLIGSSDGKKFRNFAQGLTFNIMVAHANEQLKKMSDRYLLIADSEQPLMLNVMDNYQ 1153 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 +R ++ LSGGESF++SL+LAL LS++ SH+ ++DSLFLDEGFGTLD E LD ALD L Sbjct: 1154 GGQIRTSKNLSGGESFIISLSLALGLSNMASHRMQVDSLFLDEGFGTLDEEALDVALDTL 1213 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 L SGK IGVISH++A+K+RI QI+V G G SK+ Sbjct: 1214 TNLQQSGKLIGVISHIQALKDRISSQIQVVPQTG-GISKI 1252 >UniRef50_C1XTG5 ATPase involved in DNA repair n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XTG5_9DEIN Length = 904 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 205/1047 (19%), Positives = 376/1047 (35%), Gaps = 154/1047 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR++ + +I F LFAITGPTG+GK+TLLDAI ALY ETPR Sbjct: 1 MRPLRLRVEGFGAYLEPQEILFDEVE-----LFAITGPTGSGKSTLLDAITYALYKETPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + ++ ++L A E+EF V + +R G R+E + Sbjct: 56 IG--AKGLSELKHPGAAHTRVELEFSVAEQVWRVVRVL--------GKENQHRLEYLQEG 105 Query: 121 DGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 K+ ++K K A L G+DYG FTR++LL QGQF FL K+R E L +L G Sbjct: 106 GWKVHPSSEKAKTLDAQIAHLVGMDYGTFTRAILLPQGQFDLFLRGAAKDRRETLIKLYG 165 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E + V E + AR +L+ L+ + + ++++L + Sbjct: 166 LERLKAMRERVGEHLREAREKLKLLEGEMLALEEAEEGRLEALREEI------------- 212 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 ++L++E S + + QA + ++ + WER Sbjct: 213 --------------EKLRREESSLEAQVTQAERDLKRCEELAQKFE----------EWER 248 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + L + + RL+ A + +++ + + Q Sbjct: 249 MQRTLKRLEVEATDLAQFKLRLERAQAAERVL--------PQVEAFEAAQREAHQARTHA 300 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 + +E G +A+ S + + AEQ + L +H Sbjct: 301 DRARSEVEGLQAEV---NSLKASYDPAALEAAKAEQAGLPVLESLEKLLIRHGGNLNLKH 357 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 + + + + + +L+ + + E Q L+ + E ++L Sbjct: 358 PQPLSFDEDRLEALRETERTWAEVKKLEERLAKLEGELAQDQTRLHRRQAERTELERELE 417 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQ----PCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 +K + ++ AR+ + ++ + P C + +PA ++ L Sbjct: 418 RLKALGQEAARVHEAAKAAFEARSKRRGCWPTGTCFTQENPAPCVSSRWRCSPPEAPLPN 477 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 LE E Q Q L +Q SL + Sbjct: 478 LEG-------------------------LRLELARTDQQLQELRSAYQEKRGSLKALSES 512 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 L + + L A+ + +R +L G++ ++ + + + +L L Sbjct: 513 LPEEEQRLAARQQ---------ERDKLAGEVQQIKAKLSGSPDSLAEERVRMLAGLAAKL 563 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 + + AL+ +I L L ++ + Sbjct: 564 RAATGGEAVG-----------------HFEAALKKKISDLEATKSRLEGVEQRLAEAQRK 606 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 L L + +LQ + F A M Sbjct: 607 YLAAEEAAKAAESG------------------LARLAESLSLSLQNAGFAQAAEVRPARM 648 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 + L + ++ + + + L P+ V + + +LA+ Sbjct: 649 RPEEQQALAERIESYQKDKEYVTKRLEVLTAGLIGQPAVGPE-------AVREAKNKLAE 701 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 + + + + L++ ++++ + A+++Q V+ W L +GD+ Sbjct: 702 LRSQAKLAHGRRVGLESDLERLEGQLKRKREIQGDQAKLSQSVDLWERLAR---DLQGDR 758 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 F+ + L+ A + ++ L GRY R + E V D W A+R RTLSG Sbjct: 759 FQDYLLERYQAGLLQRATELMSELSSGRY---RFCLDGGEYAVEDRWI-QAIRPVRTLSG 814 Query: 954 GESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 GES ++ + RI +LFLDEGFGTLD+ETL+ L+AL G+ +G+ Sbjct: 815 GES-FLASLSLALSLSEHLSRGRIGALFLDEGFGTLDAETLEQVAGVLEALPTRGRLVGI 873 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSK 1040 ++HVEA+ ER+P ++ V K + Sbjct: 874 VTHVEALAERLPARLVVDKHPSGSRLR 900 >UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJK3_9GAMM Length = 1231 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 267/909 (29%), Positives = 422/909 (46%), Gaps = 32/909 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+N+L+ EWKIDFT FA NGLFAITGPTGAGKT++LDAICLALYH TPR Sbjct: 1 MRILSLRFKNINALRDEWKIDFTSGEFAENGLFAITGPTGAGKTSILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +SQS N+LMTR TA+ LAEVEFEVKG++YRAFWSQ R+R++ +GNLQ +VELAR Sbjct: 61 LRTISQSTNELMTRGTADALAEVEFEVKGQSYRAFWSQRRSRDKAEGNLQEAKVELARLG 120 Query: 121 D--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D +ILA +VK K +L ++GLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTG Sbjct: 121 DQGDEILASQVKVKNQLIEQISGLDFERFTKSMMLSQGQFAAFLNADANDRAELLEELTG 180 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 TEIYG IS V+E+ KSA E++ L+A+A GV LL+ EQ+ L+ V++ + K Sbjct: 181 TEIYGLISERVYERFKSASDEVKHLEARAEGVELLSVEQLAELSEQQTVISTQLKSTEQQ 240 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 +Q Q W + +Q + Q QQ E E L L+ ++PA LR ++ Sbjct: 241 HKQLQAEQRWWNDYSKAEQTLTEAQLGQQQVAKEREAHAEDLDRLAASEPAEKLRAPYQI 300 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ-EHDR 357 + + + QQI E ++ +A +S L + +Q + +D+ Sbjct: 301 LKAVQQRVTSLVQQIAEQTPQITMLNQQKADAEVQLKSKSVALDEAKQKAQDQERLINDQ 360 Query: 358 FRQWNNEPAGWRAQF----SQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 ++E A ++QF S+Q + R + + QQL +Q+ A +T E + Sbjct: 361 VVPLDSEIARLQSQFADASSEQQNTRSQVDKLNQQLADLKQRGEADLEQLKAIT--EHLS 418 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 A + A Q + Q L Q+ V++Q ++Q++ A + + E+ Sbjct: 419 AQTHLNDLTERLPLWRAQLDQELQLQAELKQIAVSLQQRAEQQSKDQAEHAALELQISEQ 478 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 L ++T + + L+ QA +P + + R Sbjct: 479 QSLLEPLETELRDCLQQLQVSLAGRNLE----------VLEADFSRLQAQQPLLTEMRHS 528 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 A + +L +E QL + QL +++ LR+ Q + + L + Sbjct: 529 A--EQFAQLSQEQTMATAQLQTLQNQLNLTDSQLAGLREQWPLKNQAVKDLKKLLE-QER 585 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 ++ ++ E S H L + + + + Q+E+ L Sbjct: 586 KINSLEAERAKLQAGEACPLCGSHEHPLVAEYQTLDVSDTEQRLQVEEAALDELKQQGTT 645 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + Q E Q+ +Q Q Q+ QQ+ L Q + H + + Sbjct: 646 LNSQRQLLVETQIPELEQKLSQLADQLSQLQQRWQSVQQQMGTELSLNDQPAIISHIDGS 705 Query: 714 V-VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 + + E AL+ Q+Q A Q+LQK QA+ LQ + QQ+ + Sbjct: 706 TGQMAQLQGELEALRALYKQEQQQTLALQTAEQTLQKLQAELALQLQKQQANQQQSAAES 765 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ---------HRPDDGLALTV 823 +Q QL+ L+ L+ + Q ++ + E + +Q + + L+ Sbjct: 766 QRQQQLNEQLDALQVQLKAEVEAYQLVMPEPTEAIIWLEQLSKQCLELRQQHELQAELSK 825 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 E E+ Q ++ E E +++ +Q+L + + + + Sbjct: 826 RTETQSVEIGQIEIQIVEANKRLAERDERVSGLTSTLADKQSLRKALFSDQIVTDVREQM 885 Query: 884 NSLIGSKEG 892 + + E Sbjct: 886 QKDLSTAEA 894 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 299/952 (31%), Positives = 434/952 (45%), Gaps = 108/952 (11%) Query: 191 EQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLT 250 E+ ++ L+ +Q + + + EQ +T Q D E QL + ++ Sbjct: 292 EKLRAPYQILKAVQQRVTSLVQQIAEQTPQITMLNQQKADAEVQLKSKSVALDEAKQKAQ 351 Query: 251 RQDEL--------QQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 Q+ L E +R Q A +E++ + Q+ L+ + L +R Sbjct: 352 DQERLINDQVVPLDSEIARLQSQFADASSEQQNTRSQVDKLN-----QQLADLKQRGEAD 406 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 L I + + T L R ++ + +Q + Q ++ + Sbjct: 407 LEQLKAITEHL-SAQTHLNDLTERLPLWRAQLDQELQLQAELKQIAVSLQQRAEQQSKDQ 465 Query: 363 NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQR 422 E A Q S+Q S E L T L L + + ++ Q+ Sbjct: 466 AEHAALELQISEQQSLLEPLE------TELRDCLQQLQVSLAGRNLEVLEADFSRLQAQQ 519 Query: 423 PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT 482 PL + Q + +Q + + ++ L +R+++ K Q + D+K Sbjct: 520 PLLTEMRHSAEQFAQLSQEQTMATAQLQTLQNQLNLTDSQLAGLREQWPLKNQAVKDLKK 579 Query: 483 ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKL 542 + EQE +I +LEA+RA+LQAG+ CPLCGS HP V YQ L+ + RL E + +L Sbjct: 580 LLEQERKINSLEAERAKLQAGEACPLCGSHEHPLVAEYQTLDVSDTEQRLQVEEAALDEL 639 Query: 543 GEEGATLRGQLDAI-TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD---- 597 ++G TL Q + Q+ E + L L Q+WQ+V + L D Sbjct: 640 KQQGTTLNSQRQLLVETQIPELEQKLSQLADQLSQLQQRWQSVQQQMGTELSLNDQPAII 699 Query: 598 -----------------IQPWLDAQDEHERQLRLLSQRHELQGQIAAH------------ 628 + E ++ L L + LQ A Sbjct: 700 SHIDGSTGQMAQLQGELEALRALYKQEQQQTLALQTAEQTLQKLQAELALQLQKQQANQQ 759 Query: 629 -----NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE 683 +Q+ Q +Q++ Q L + Y L +P+ E WL ++ +Q+ Sbjct: 760 QSAAESQRQQQLNEQLDALQVQLKAEVEAYQLVMPEPTEAIIWLEQLSKQCLELRQQHEL 819 Query: 684 LTALQNRIQQ------------------------------------------------LT 695 L R + +T Sbjct: 820 QAELSKRTETQSVEIGQIEIQIVEANKRLAERDERVSGLTSTLADKQSLRKALFSDQIVT 879 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 + E + + + L ++ + + LQQQ V + +K A++ Sbjct: 880 DVREQMQKDLSTAEAQHQAQLHLLQEAETASKSAQAALAQLQQQHVAETEGQEKQLAEWQ 939 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 L +S F D+ F+AAL+DE T+L+ L L+ + Q L+ Q A Q Sbjct: 940 QILGSSQFADEAEFVAALLDETERTELKALADRLKQAQEHNQALLKQAQAQHADLQAQGE 999 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 AL +Q++LA L++ +GE+ QL+QD R QQ L QI + Sbjct: 1000 AAKYALEHA-TPLQEQLASIETALKDLIHQRGEVSSQLEQDKQRRNSQQQLFAQIEAAKR 1058 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 + +D YLNSL+GS+ GDKFR+FAQGLTLD+LV+LAN QL RLHGRY LQRK SEALE++ Sbjct: 1059 RYDDLAYLNSLVGSQRGDKFRRFAQGLTLDHLVYLANNQLDRLHGRYQLQRKQSEALELQ 1118 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 VVDTWQAD VRDT+TLSGGESFLVSLALALALSDLVS KT IDSLFLDEGFGTLDSETLD Sbjct: 1119 VVDTWQADTVRDTKTLSGGESFLVSLALALALSDLVSQKTSIDSLFLDEGFGTLDSETLD 1178 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 TALDALD+LNASGK IGVISH+EAMKERIP+QIKV+K +GLG S+LE+ + V Sbjct: 1179 TALDALDSLNASGKMIGVISHIEAMKERIPLQIKVRKQSGLGISRLENQYQV 1230 >UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=Q480G6_COLP3 Length = 1308 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 260/926 (28%), Positives = 411/926 (44%), Gaps = 66/926 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR +N+NSLKG WKIDF+ PF +NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLRFENINSLKGSWKIDFSEAPFDNNGLFAITGPTGAGKTTILDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS+ QN LMTR T+ C+AEVEFEV+G+ YRAFWSQ RARN+ DGNL P ELA+ Sbjct: 61 L-TVSKKQNQLMTRHTSHCMAEVEFEVRGQGYRAFWSQKRARNKLDGNLLEPVAELAKL- 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I++DK+K + LTGL++ RFT+SM+LSQG+FAAFL ++P +RA+LLE+LTGTE Sbjct: 119 DGTIVSDKLKMVRSDISELTGLNFSRFTKSMMLSQGEFAAFLTSQPNDRAQLLEQLTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VF+ H+SA L+ LQAQ+ GV+LL EQV++L L +T++EK + Q Sbjct: 179 IYGDISKQVFDNHRSASEALKLLQAQSQGVSLLDDEQVKALEQQLTEITEQEKTVNAQLQ 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW---- 296 Q QQ W T +Q + L + +E A+ L L+L+ A ++ + Sbjct: 239 QAQQVKAWCTNFSVNEQNQHAAKTQLLEIEKKELAAKQDLDLLTLSSLAEPIKAPYEKMV 298 Query: 297 ---ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 E+ + + +Q+ ++ + + +++ + A+ + +Q L+ +Q Sbjct: 299 HYREQYQQTLQQVTSQTEQLAILDQDIVVSDEALTLLKNRHVEAEAQRKVIEQVLHDKIQ 358 Query: 354 --------EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ--WQQQLTHAEQKLNALAAIT 403 + + + N A + L + Q T +Q+ Sbjct: 359 PLDHNITHQQNALTETKNTIAEQSETLGVNANALTALEAEHQKAQETVQQQQAYLSQGQA 418 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV-------TQEQ 456 L +++ Q+ + L+ ++VAL + +K L LQ Q E Sbjct: 419 LAKLPEKLPLWQNQYQQLSQLQANVVALVNEQDNTEKALLTLQTRQQEQQLQITQSEDEL 478 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 Q N+ M ++ ++ Q + I + G L G + A Sbjct: 479 KQLNSRKQLMGEKTQQLIQHSQAAQAILSSRVTSTSTSTGNNDKGEGVVNELTGGMLNQA 538 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + Q + + Q++ LA V L +E L Q +QL E LRQ A Sbjct: 539 ILDRQNQQLALKQAQQLAQRFHV--LTQEQQGLSAQQSQDKQQLVITEQALVKLRQRYSA 596 Query: 577 LTQQWQAVTA--SLNITLQPLDDIQPWLDAQ-----------------------DEHERQ 611 QQ + V + T+ L + + L + + +R Sbjct: 597 TQQQKKDVETLLAQQQTIMALSEHRAKLQPEESCPLCGSTDHPAINEYRSLDSDEHQQRL 656 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIE---QRQQLLLTTLTGYALTLPQEDEEESWLA 668 +L +R +L+ Q N Q+E R Q + + + A + + L Sbjct: 657 SQLTLERAQLEKQGKELNGVQANLTAQLEMQTNRLQGITSEQSNLAQNWQSLNINQYVLL 716 Query: 669 TRQQEAQSWQQRQNELT---------ALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 ++ +++ S Q E + + L L+ Q+ + + + + Sbjct: 717 SQNEQSFSLQNVDVEQSINHQLTMVFGQLEELLLLQTSLQENSQNQQQNSEQISHCEKQL 776 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 + Q L Q + Q + L+ Q F L A + D + L Sbjct: 777 STLFNQLQLLEEQGKNQQGSKQKFTEELRLKQQAFLE-LNAQLLADIKTTEITLPLGGVN 835 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 ++++ Q ++ QA+ LV E + + D T + + +L L Sbjct: 836 EKIKEQDQEQNLEQEQARKLVICIDEKWLESLSKQGADYQQTVTTHQAAKTQLDSLVNDL 895 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQT 865 + Q+ Q QQ+ Sbjct: 896 GLLKQQVVHQQNQVTQIKSQLTQQEN 921 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 224/873 (25%), Positives = 379/873 (43%), Gaps = 31/873 (3%) Query: 198 TELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQ 257 +L +LQA + ++L +++ Q+ ++ + +Q + E Q Sbjct: 434 QQLSQLQANVVALVNEQDNTEKALLTLQTRQQEQQLQITQSEDELKQLNSRKQLMGEKTQ 493 Query: 258 EASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN 317 + + QA Q L+ + + + + + + +++ Sbjct: 494 QLIQHSQAAQAILSSRVTSTSTSTGNNDKGEGVVNELTGGMLNQAILDRQNQQLALKQAQ 553 Query: 318 TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS 377 Q L + +A+QS + QQ + ++ R+ + +QQ + Sbjct: 554 QLAQRFHVLTQEQQGLSAQQSQDKQQLVITEQALVKLRQRYSATQQQKKDVETLLAQQQT 613 Query: 378 DREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 L + + +L E + + + L L Q Sbjct: 614 IM-ALSEHRAKLQPEESCPLCGSTDHPAINEYRSLDSDEHQQRLSQLTLERAQLEKQGKE 672 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 A L ++ T + + + Q ++ + + EQ ++ ++ ++ Sbjct: 673 LNGVQANLTAQLEMQTNRLQGITSEQSNLAQNWQSLNINQYVLLSQNEQSFSLQNVDVEQ 732 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 + L N ++ ++ +TL QL + Sbjct: 733 SINHQ-----LTMVFGQLEELLLLQTSLQENSQNQQQNSEQISHCEKQLSTLFNQLQLLE 787 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ------PLDDIQPWLDAQDEHERQ 611 +Q + + Q ++ + Q + + A L ++ PL + + QD+ + Sbjct: 788 EQGKNQQGSKQKFTEELRLKQQAFLELNAQLLADIKTTEITLPLGGVNEKIKEQDQEQNL 847 Query: 612 LRLLSQRHEL---QGQIAAHNQQIIQYQQQIEQRQQLLLT--------TLTGYALTLPQE 660 + +++ + + + + ++Q YQQ + Q L + Q Sbjct: 848 EQEQARKLVICIDEKWLESLSKQGADYQQTVTTHQAAKTQLDSLVNDLGLLKQQVVHQQN 907 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQN------RIQQLTPILETLPQSDELPHCEETV 714 + QQE Q +T +Q + E++ EL E TV Sbjct: 908 QVTQIKSQLTQQENDLIQDYSLRVTHFVELGITGEDMQDSVLLRESINSQRELSEAEFTV 967 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 + + Q T + A+ + L S F D++ FL AL+ Sbjct: 968 ADQRHNEKKAAQQLNRGQLTTSKSLLDNLFPKNDNAKKDWLALLTDSKFTDEEEFLLALL 1027 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH--QQHRPDDGLALTVTVEQIQQEL 832 + L +L ++++ ++QA+ L++Q+ + + Q+ + A+ + + L Sbjct: 1028 SAERKHDLTKLANDIDDSKKQAKILLSQSEKITLELNVQKDTLSEKGAVDFVESSVSESL 1087 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 L++ + G+ QQ++QD N+ QQ+TL++QI ++D +LN+LIGS +G Sbjct: 1088 VNLSDLLKQCQQNIGQFSQQIEQDNSNKIQQKTLLEQIKLAQDALDDLSHLNALIGSADG 1147 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLS 952 KFRKFAQGLTL NLVHLAN QL RL GRY LQ + ++ LE+EV+DTWQ D RD +TLS Sbjct: 1148 AKFRKFAQGLTLANLVHLANAQLERLFGRYQLQCQQNDTLELEVLDTWQGDTARDIKTLS 1207 Query: 953 GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 GGESFL+SLALALALSDLVS+KT IDSLFLDEGFGTLD+ TL+ ALDALD LNASGK IG Sbjct: 1208 GGESFLISLALALALSDLVSNKTSIDSLFLDEGFGTLDNNTLEVALDALDNLNASGKMIG 1267 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 VISHV+A+KERI VQIKVKK++GLG S L+ + Sbjct: 1268 VISHVDALKERIGVQIKVKKLSGLGVSSLDKQY 1300 >UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales RepID=A1AS54_PELPD Length = 1230 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 226/930 (24%), Positives = 367/930 (39%), Gaps = 60/930 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL G+W +D T + S+G+FAITGPTGAGKTT+LDAICLALY +TPR Sbjct: 1 MKILRLSFRNLNSLAGDWDLDLTHPAYVSSGIFAITGPTGAGKTTILDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q +N++M+R + +C AEVEFE +R WSQ+R+R +PDG LQ PR E+A Sbjct: 61 LGRITQGENEIMSRQSGDCSAEVEFETGHGRFRCHWSQHRSRRRPDGQLQQPRHEIAEAE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++K +TG+D+ RFTRSMLL+QG FAAFL A+P ERA +LE++TGT Sbjct: 121 SGKILESRLKGVATRVEEVTGMDFDRFTRSMLLAQGGFAAFLQARPDERAPILEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ R L +++A+ G+ LL+PE+ Q L + E L + Sbjct: 181 IYSRISIKVHERTTEERNRLTEMRAELEGIRLLSPEEEQELLLAKTERKQRESTLNSEAG 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++L W R LQQE + Q E A PQL L+LA A L + Sbjct: 241 AIRETLAWQERIALLQQELLQLDNEQQAFQERREAAAPQLEKLALAGRALKLGGDHAHLL 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + ++ RL + + A Q +Q+ + R+ Sbjct: 301 LLRSQQQEEQTELRTAMERLPRLQSQWQEAFEGLERADAGCAQARQTQEREAELIRLTRE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + G +AQ T++ E R+ LA E L A Sbjct: 361 LDLRIGGLQAQLRDLTAETEATRRQASGY--------RLAMEGYHRRMTESGEELRHVAA 412 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA----LNEMRQRYKEKTQQ 476 + L + +++L L ++ + + R + R + + Q Sbjct: 413 FLEEQHADAGLVEALTGIEQQLKGLGTTVRQHDEIRAAREQQAAVLEDATRSFARTEEQW 472 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCP--------LCGSTSHPAVEAYQALEPGVN 528 E E R+ T+ QR L G+ L G + N Sbjct: 473 HKAHTAATEAEERLATIRGQRQALLKGRELSAWRDETQFLAGRLTRLESIGQLLERIEEN 532 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 RL L +L + L + ++ + Q E + L+ L + Sbjct: 533 GHRLTELRGRQHELEQRQQALILRERSLAGECQLRERIVRELQDKLLLLNRVRSLEEDRK 592 Query: 589 NI-------------TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 + + A+ E E L + EL ++ + + Sbjct: 593 QLVDGVACPLCGATRHPYAAGTVPQPDQARQELETALEESGKAGELLSRVRQEQVAVQKD 652 Query: 636 QQQIEQRQQLLLTTL-------------TGYALTLPQEDEEESWLATRQQEAQSWQQRQN 682 Q+ Q + L L G Q + ++W +E ++ ++R Sbjct: 653 LQRAGQDRGELEARLLDDRTIRDNASHELGIGPEADQAADGQAWTLLIDRETRACRERLA 712 Query: 683 ELTALQNRIQQLT-------PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT 735 E A+ ++ ++E L + + L Q Sbjct: 713 ERLAVIREGERQEGDERGAGELVERLKGELAARDQARLSARLGRESAQTERMRLEQQVAA 772 Query: 736 LQQQDVLAAQSLQKAQAQFD-TALQASVFDDQQAFLAALMDE-----QTLTQLEQLKQNL 789 L + + + + A F + + D+ A L D + LE+ + Sbjct: 773 LGAERDRVLEEMGRVLAPFGIPEIAPTGGDELLAALTGRRDAYVRHLRARDLLERGRTEC 832 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + + + L+ +T L +Q + VEQ + + E + + Sbjct: 833 AAEGEKQRALLAETERALCDREQQLREMTAHRGALVEQRLERYGERDPDKEEKRLA-DAL 891 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 RQ K+ ++Q L ++ + QQ+E Sbjct: 892 RQADKRREQALREQSRLQDELGGLKQQIER 921 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 219/922 (23%), Positives = 361/922 (39%), Gaps = 47/922 (5%) Query: 128 KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISA 187 + + E A L L R L Q Q R + E Y + Sbjct: 343 QARQTQEREAELIRLTRELDLRIGGL-QAQLRDLTAETEATRRQASGYRLAMEGYHRRMT 401 Query: 188 MVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLN 247 E+ + LE+ A A V LT ++ L + ++ A++Q+ L Sbjct: 402 ESGEELRHVAAFLEEQHADAGLVEALTG--IEQQLKGLGTTVRQHDEIRAAREQQAAVLE 459 Query: 248 WLTRQ-DELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAAL 306 TR +++ + A +A + Q AL + R + +A L Sbjct: 460 DATRSFARTEEQWHKAHTAATEAEERLATIRGQRQALLKGRELSAWRDETQFLAGRLTRL 519 Query: 307 AHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPA 366 I Q +E + LR +H ++ L +++SL Q +R + + Sbjct: 520 ESIGQLLERIEENGHRLTELRGR-QHELEQRQQALILRERSLAGECQLRERIVRELQDKL 578 Query: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQ 426 + DR+ L A T T ++ L Sbjct: 579 LLLNRVRSLEEDRKQLVDG-----------VACPLCGATRHPYAAGTVPQPDQARQELET 627 Query: 427 HLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQ 486 L G+ R+ Q QVA+Q Q Q L + ++T + + Sbjct: 628 ALEE-SGKAGELLSRVRQEQVAVQKDLQRAGQDRGELEA--RLLDDRTIRDNASHELGIG 684 Query: 487 EARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR-----LLALENEVKK 541 + + Q L + C + + E R + L+ E+ Sbjct: 685 PEADQAADGQAWTLLIDRETRACRERLAERLAVIREGERQEGDERGAGELVERLKGELAA 744 Query: 542 LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPW 601 + + R ++ + R E + +L + + ++ V A I Sbjct: 745 RDQARLSARLGRESAQTERMRLEQQVAALGAERDRVLEEMGRVLAPFGIPEIAPTGGDEL 804 Query: 602 LDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED 661 L A + +L + + Q+ + A T Sbjct: 805 LAALTGRRDAYVRHLRARDLLERGRTECAAEGEKQRAL-------------LAETERALC 851 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 + E L + +++ E ++ ++ + + L Q+D+ L + Sbjct: 852 DREQQLREMTAHRGALVEQRLERYGERDPDKEEKRLADALRQADK----RREQALREQSR 907 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ 781 + ++ L Q + + + + + +A F LQ S F D+ A+L A + ++ + Sbjct: 908 LQDELGGLKQQIERMTSSRDRRGEEISRREAAFLAQLQESGFSDETAYLHACLPQERFDE 967 Query: 782 LEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE 841 L + L T + ETL R + ++EQI +E A +L E Sbjct: 968 LTRWADELARDETSITTRLRDRQETL-----RRETERNLTAKSLEQIHEEHAALASQLGE 1022 Query: 842 NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG 901 G I QQL+Q A+ Q+ Q+ +Q+I Q + + W L SLIGS +G KFR FAQG Sbjct: 1023 LQKELGAIDQQLRQHAEQLQRHQSRLQEIRQQGHECQRWELLRSLIGSSDGKKFRNFAQG 1082 Query: 902 LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL 961 LT + +V AN+QL+++ RY+L R +E LE+ V+D +QA +R T+ LSGGESF+VSL Sbjct: 1083 LTFELMVAHANRQLSKMSDRYILVRDTAEPLELNVIDNYQAGEIRSTKNLSGGESFIVSL 1142 Query: 962 ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 AL+L LS + S R+DSLFLDEGFGTLD + L+TAL+ L L GK IG+ISHV A+K Sbjct: 1143 ALSLGLSRMASRNVRVDSLFLDEGFGTLDEDALETALETLAGLQQEGKLIGIISHVPALK 1202 Query: 1022 ERIPVQIKVKKINGLGYSKLES 1043 ERI +I+V+ NG G S L Sbjct: 1203 ERIGARIQVEAGNG-GRSTLSG 1223 >UniRef50_B5Y7X7 Probable DNA double-strand break repair Rad50 ATPase, putative n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X7_COPPD Length = 972 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 177/1036 (17%), Positives = 377/1036 (36%), Gaps = 78/1036 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + N LK F G+F ITGP G+GK+++L+A+ ALY +T R Sbjct: 1 MKPKKLEVTNFLGLKN------LSLEFPEQGVFVITGPNGSGKSSILEAMYFALYGKTMR 54 Query: 61 LSNVSQSQN------DLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV 114 L ++ + + A + F +G+ Y R ++ D + Sbjct: 55 LPGDVKNTAVINRNAQHSSDNPARAVVSFTFVQQGKEYLVRRELVRGVHKKDDVSHNAWL 114 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 G + V + GL F ++ L QG+ + AKP +R ++ + Sbjct: 115 YDLSGHAGLVPETGVVKVNNKVEDILGLTPEVFAATVFLGQGKITELVEAKPDKRRKIFD 174 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 + T+ ++ +V + +T+++ L + + + L LQ + + KQ Sbjct: 175 AILETDHLVKMQELVRGDLRELQTKVKALLERKEILEQGPS--AKDLEKELQDVEENMKQ 232 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 +I Q +Q+ L ++ + + + +E EK + + + + LR Sbjct: 233 VIERVQVFEQAAKELEEVQRIKGDMENTEADIAALRSEIEKLKEAAERDTRIRLIKELRS 292 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 + + + L + + +++ L + ++ + +L + ++ +E Sbjct: 293 KYAELEQWQIQLEELTKNKDKLGKDLSNWSERINELKLRVVQIEGQLNSLEDDVH-LSKE 351 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + Q + R+ + + R +++ + L L ++ + Sbjct: 352 KEILAQSLEDLKALRSYLEEAWNAIVQCRLTSEEV------------LQLVLEERKLKSE 399 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 + + + L ++ + +++ Q V +E + +++R + Sbjct: 400 INKLEHFVEVVSSSDGLINSYFSAKQNMEKVEKEKQEVEKELFILEQSQATLKERISILS 459 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 Q +++ + L G CP+CGS E + E + + L+ Sbjct: 460 QDYPNLEQDFL-------VSRLAEPLHVGDTCPVCGS------EITKLREIPLPEDVLM- 505 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 E +L E L Q I ++ + + E LR+ + + +++ Sbjct: 506 ---EFSQLEMERYHLEQQQRIINERKAKLDKEEIELREVIKECESRLDLAVLEKMGSVKS 562 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 D Q WL AQ E + NQ++ Q ++QI+ ++ L +T Sbjct: 563 FDAFQMWLSAQRE----------------ALLERNQRVSQLEEQIQSKRDRLKSTYCSTL 606 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 L + E + L + + Q + ++ R ++L + + + + Sbjct: 607 KRLCNQKEIKEALL-KGSVEEQLSQADQGIAEMERRKKELEAFSQQVREQRQDLMLALAE 665 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 R+ E+ + + Q + + + ++ L + + L+ Sbjct: 666 TNVELRKTQEREEDIRNTLQETIHRMKQLSGQVSTLLSELKEELSRAHISYEDYE---LL 722 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 + + + L+ + + + + + ++R L V +EQ + E Sbjct: 723 KSEQESGAADQLRALKGKLDVLEKRLEEQRKKYLSLLENRDVASEELPVQLEQAKSEYEV 782 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 L E Q I Q L Q++ L Q Q+ ++ L+ L + D+ Sbjct: 783 L---LGERGRLQASIEQAL-------QKEAELNQVEVQLDALEKELNILSRLSDDLKADR 832 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 F F +G ++ +V A+ L + G S++ +VV + D +LSGG Sbjct: 833 FPDFYRGEMMNEIVSSASSLLWEMSGGQFNLTFDSDSFRFDVV--FDDGLSSDISSLSGG 890 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 E LV+L+LA A+S + ++S+FLDEG LD E L L +G++ Sbjct: 891 EKVLVALSLAFAISQHFAG--SLESIFLDEGLAWLDKENNTKLAQYLQNLEDGAILVGIV 948 Query: 1015 SHVEAMKERIPVQIKV 1030 +H E ++ V Sbjct: 949 THSEEFAINFQRRLYV 964 >UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6P2_9GAMM Length = 1203 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 215/953 (22%), Positives = 367/953 (38%), Gaps = 83/953 (8%) Query: 168 ERAELLE-ELTGTEIYGQISA--MVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R EL + EL E Q V + R E E + + L P + L + Sbjct: 250 QRRELFKPELERLERAKQALEISAVHADISALRREQESANQECNDRRLALPGREAELKTA 309 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQ-------------------- 264 LT L + +++ +L + + L + +++ Sbjct: 310 ADALTLAVADLEQKRIEQKSTLAVIRKVQALDIKLQEKEEPMIKVNEVILAIKRSLSTLL 369 Query: 265 -----ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 + + L L + L + I L + +Q Sbjct: 370 AKNNDDCRDLAIKSIAFTEVRERLRLKKADEGLIANLAGIGSRFDILRDLNEQHGNKAAE 429 Query: 320 LQSTMALRASIRHHAAKQSAELQQQQQSLNT------WLQEHDRFRQWNNEPAGWRAQFS 373 L A + +Q+ L +++ LN Q + A WR Sbjct: 430 LSIAEMQMAELDRTWHEQTVMLATKEKELNACQHDFVHYQNQLKKTLAGRAMADWRGASM 489 Query: 374 QQTSDREHLRQWQQQ---LTHAEQKLNALAAIT--LTLTADEVATALAQHAEQRPLRQHL 428 L++ + L + L AL LTL D + + EQ + Sbjct: 490 LLKERSASLQKTMKAIHSLADLKANLEALNNRQAMLTLAQDGLVNKIQVQVEQCGAYERE 549 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQ--------------------TQRNAALNEMRQ 468 V L + KR+ L + EQ + L R+ Sbjct: 550 VHLLETQLSLFKRIQDLTDIRHQLEDEQPCPLCGAKEHPFATGTIPVPDETMTLLKGARE 609 Query: 469 RYKEKT-----------QQLADVKTICEQEAR-IKTLEAQRAQLQAGQP--CPLCGSTSH 514 YK+ + + D++ + Q I + + A++Q + Sbjct: 610 NYKQANAMHSGLKIKQAENVKDLEQLLLQRNECIDRIAIEEAEIQDAFSIFALDVSAQER 669 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 V E N L + V + ++ R L+ + + E E Q+ + Sbjct: 670 ETVLVNLVQETDKNLENTLQVVQVVDEYEQKMELAREALEKSKESFAQSERENQTASHKK 729 Query: 575 QALTQQWQAVTASLN-ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + Q + L+ + Q + L A + + L +Q ++AA Q + Sbjct: 730 ISAEQDVTRIAKELSTLDFQRQKTLDKELAALATYGIKSLALDALAHVQLELAARRDQYL 789 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI-- 691 Q+Q ++ + + + Q E L +Q + + Q+ L +N + Sbjct: 790 DLQKQNSDLEKQIASLQSQTKYQAEQISNLEIDLKNQQNMLMALKADQDLLMHERNSLFG 849 Query: 692 -QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + + L E + + ++C L S +++++ + LQ+ Sbjct: 850 DRNPHEVETHLVAVIEAGEKRIEGLRQTLSVTEQECAKLKSAIESIEKTIFSRSLKLQEV 909 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 F T L F D+ +++ A + E L Q LEN+ + +T A+ L Sbjct: 910 ALVFKTQLDKFNFADEASYINACLSEDERKNLMLNAQKLENEYTELETRRKDKADLLEIE 969 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 +Q + E + QE + +L+E + G ++Q+L+ + R++QQ +Q I Sbjct: 970 RQKKVTAQSP-----EFLVQERSGLISRLKEIQQAIGAMQQKLEGNERLRKKQQERVQAI 1024 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 ++ W L++LIGS +G K+R FAQGLT + ++ AN+QL ++ RYLL R S+ Sbjct: 1025 NLQKRESLRWDTLHALIGSSDGKKYRNFAQGLTFEMMIGHANRQLLKMTDRYLLIRDESQ 1084 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 LE+ VVD +QA +R T+ LSGGESF+VSL+LAL LS + S R+DSLFLDEGFGTLD Sbjct: 1085 PLELNVVDNYQAGEIRSTKNLSGGESFIVSLSLALGLSHMASKNVRVDSLFLDEGFGTLD 1144 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 + LDTAL+ L L +GK IGVISHV +KERI +I++ G G S + Sbjct: 1145 EDALDTALETLAGLQQAGKLIGVISHVPTLKERISTRIQISHQTG-GRSLISG 1196 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 197/860 (22%), Positives = 339/860 (39%), Gaps = 43/860 (5%) Query: 23 TREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAE 82 T F S+G+FAI GPTG+GKTT+LDAICLALY TPRL+ V++S+N++M R T C +E Sbjct: 2 THPAFVSDGIFAIIGPTGSGKTTILDAICLALYGRTPRLNKVTKSENEIMARQTGACFSE 61 Query: 83 VEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGL 142 V FE + +R WSQ RAR +PDG LQ P+ E+A +IL K++ E +TG+ Sbjct: 62 VLFETQAGRFRCHWSQRRARKKPDGELQTPKHEIADADSNQILDAKLRGVAEQIEMVTGM 121 Query: 143 DYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEK 202 D+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTEIY QIS V E+ R L+ Sbjct: 122 DFDRFTRSMLLAQGGFAAFLQAVPDERAPILEQITGTEIYSQISMCVHERRSDERKTLDL 181 Query: 203 LQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 + A+ +GV LL E+ Q L SL ++E L ++ ++ WL + + L+++ Sbjct: 182 MMAELAGVQLLGDEEEQQLNVSLDHHNNQEVLLQQEITKKNLAMTWLEQLNSLEKDLGFI 241 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQS 322 + L E +P+L L A+ A + I+ Q+ + L Sbjct: 242 IEQQHDLLQRRELFKPELERLERAKQALEISAVHADISALRREQESANQECNDRRLALPG 301 Query: 323 TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL 382 A + A+L+Q++ + L + + + + + + Sbjct: 302 REAELKTAADALTLAVADLEQKRIEQKSTLAVIRKVQALDIKLQEKEEPMIKVNEVILAI 361 Query: 383 RQWQQQLTHAEQKLNALAAITLTLTADEVA-TALAQHAEQRPLRQHLVALHGQIVPQQKR 441 ++ L L +A T + + + + L+A I + Sbjct: 362 KR------SLSTLLAKNNDDCRDLAIKSIAFTEVRERLRLKKADEGLIANLAGIGSRFDI 415 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICE--QEARIKTLEAQRAQ 499 L L N E + + E+ + + E+T LA + Q + + Sbjct: 416 LRDLNEQHGNKAAELSIAEMQMAELDRTWHEQTVMLATKEKELNACQHDFVHYQNQLKKT 475 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L G++ + + L L+ ++ L A L D + + Sbjct: 476 LAGRAMADWRGASMLLKERSASLQKTMKAIHSLADLKANLEALNNRQAMLTLAQDGLVNK 535 Query: 560 LQRDENEAQSLRQDEQALTQQW---QAVTASLNITLQPLDDIQPWLDAQDEH-------- 608 +Q + + ++ L Q + + +I Q D+ L EH Sbjct: 536 IQVQVEQCGAYEREVHLLETQLSLFKRIQDLTDIRHQLEDEQPCPLCGAKEHPFATGTIP 595 Query: 609 ---ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEES 665 E L R + A H+ I+ + ++ +QLLL +E E + Sbjct: 596 VPDETMTLLKGARENYKQANAMHSGLKIKQAENVKDLEQLLLQRNECIDRIAIEEAEIQD 655 Query: 666 WLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQ 725 + + + ++ + +Q + L L+ + DE E + E + E Sbjct: 656 AFSIFALDVSAQERETVLVNLVQETDKNLENTLQVVQVVDEYEQKME-LAREALEKSKES 714 Query: 726 CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQL 785 + QT + + A Q + + + T +D Q L++ Sbjct: 715 FAQSERENQTASHKKISAEQDVTRIAKELST-----------------LDFQRQKTLDKE 757 Query: 786 KQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTS 845 L ++L + R D L L +++++A + + Sbjct: 758 LAALATY--GIKSLALDALAHVQLELAARRDQYLDLQKQNSDLEKQIASLQSQTKYQAEQ 815 Query: 846 QGEIRQQLKQDADNRQQQQT 865 + LK + + Sbjct: 816 ISNLEIDLKNQQNMLMALKA 835 >UniRef50_UPI00016C3AE4 exonuclease SbcC n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AE4 Length = 1044 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 179/1061 (16%), Positives = 365/1061 (34%), Gaps = 46/1061 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M ++L S K E +I F P L+ ++G G+GK+++ DA+ AL+ Sbjct: 1 MIPQRVKLSGFLSYKDEQEIRFDGAP-----LWMLSGTNGSGKSSIFDAVTFALFGH--- 52 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 SQS +L+ ++ E +F + + YR + + ++ QV + + Sbjct: 53 HRGGSQSAAELINKEATTLSVEFDFTSERQLYRIKRTVRKRQSGVASTQQVLKHTHSEIT 112 Query: 121 DGKILADKVKDKLEL----TATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 A + GLDY FT S+LL QG+ L++ P RA +L + Sbjct: 113 GETWEAVAGTEYRAKFDAWVKDKIGLDYETFTSSVLLLQGKSEKLLDSTPAGRAGVLARI 172 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E Y ++ ++ ++ ++ELE L Q GV +T E+ + A + L + ++ Sbjct: 173 VDLERYQKLHGKADDKRRALKSELEGLTNQLLGVKEVTNEEYAEVEAQILELDEARLRVQ 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 R + Q + + LQ A A + + R++ P Sbjct: 233 ERIDHLNALELRARRWTDTQAKLQGVRAKLQGAEKLLGTAVAIEKDHTRLRELRDVLPAV 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 I + + + + + R + ++ +L + + + Sbjct: 293 NTIVTERGRVNASERNTDRLTKEREEVTETRRKTDNTLSQLRKKLAALKTTQTENEAKKG 352 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 E + Q + + +L + +A + T E LA Sbjct: 353 HLETRLRELTAVLEKVKQVEDAESEIARLDDELKPFPKDTDAR--VREFQTEHERLALLA 410 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ----NVTQEQTQRNAALNEMRQRYKE 472 QH + + V ++++ + ++ ++ TQ A R+ Sbjct: 411 QHVALLDRLHQDRSELTKAVTAERQVRADESRLKAEGIKAKEDFTQLEADAKAAREDRAA 470 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 K Q A+ + + Q + L + + C CG P + A E ++ Sbjct: 471 KDQATAEARALARQA---RELADEFKSMTGVTKCRACGQKLTP---EHFADEKKARETEA 524 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLR---QDEQALTQQWQAVTASLN 589 E +K L R + D + + + LR +D A +Q A L Sbjct: 525 KKAEERLKTLTVGAEKARTREDELAAKEVSERKRLTDLRDRWKDADAALKQTTADIKRLT 584 Query: 590 ITLQPL-----DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 + D+ + L + + R +L + ++ +++ Sbjct: 585 EACRQTYFALPDEFKQKLGPSEPADWSAVTYPNRQDLAALNDEARGIELTRRRLKAAQEE 644 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 L +E + A + + +Q E A Q+ + + LE + Sbjct: 645 AKKAEALRAKLDSARERLARAQRALPGGDPGALRQ---EYVAKQSEEKSVKAALEAGKKE 701 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + ++ + + + + + + +S+++A+ A Q + Sbjct: 702 ITATEGDIERYQRAVNNAEQELVTIAGKLELEESSRRQSGESIERAKKALPAAWQK-PLE 760 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 A ++ + + + Q + A+ + + Q + + Sbjct: 761 TAGLTDRARWQDELDELVTKNTEARYTQLQAARGGLDPLRAEIKQLEGEADAFPEEERRS 820 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 + ++ E+A ++L + + + D R+Q+ L ++ + L Sbjct: 821 PDDVRNEVAAARKELDLRNQQHLDALGRRRVLDDYRRQRFELAERFRAVDADHNRHKVLA 880 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR------KASEALEVEVVD 938 L+G D+ ++ +V AN L RL G L R +AL++E + Sbjct: 881 ELLGR---DRLQRHLVRQAERQIVDYANAVLDRLSGGQLFMRLVESEAGTDKALDLECAN 937 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR-IDSLFLDEGFGTLDSETLDTA 997 + LSG + F V++ALAL + S + R I+S+ +DEGFG LD Sbjct: 938 RVTGGGAINVAFLSGSQRFRVAVALALGIGQYASKQHRPIESVIIDEGFGCLDRAGRQVM 997 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 + L L I ++SH E + P K + +G Sbjct: 998 IQELQNLRGHLHCILLVSHQEEFADAFPDGYKFELQDGATR 1038 >UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Psychrobacter RepID=Q4FSU3_PSYA2 Length = 1307 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 197/948 (20%), Positives = 368/948 (38%), Gaps = 77/948 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW IDF+ F + G+FAITG TGAGKTT+LDAICLALY +TPR Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MT+ T EC AEV E+ + Y+ W Q+RA + GNL + E++ Sbjct: 61 LGDITGSTNEIMTQGTGECSAEVIIEIDAKRYQCSWYQHRAHKKAKGNLLPIKHEISEVK 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL +K L G+D+ +FTRS++L+QG FAAFL + +RA +LE++TGT Sbjct: 121 SGKILEEKKSKTSAYIQALIGMDFSQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L KLQA G++LL+ E A L+ L ++ + + Sbjct: 181 IYAKISLNVHEKKRFEEDVLSKLQAGVDGLSLLSIEDENLQAAELKALNQQQSTQRQSFK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + L WL +LQ S Q A ++ P+ LS+A A + + ++ Sbjct: 241 TLSEQLQWLNNVQQLQNNLSIYQSEFATAQQAQQAFVPEAKRLSIANKALEIDSQFRELS 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + + + + +++ + A H + +Q +L T L + R+ Sbjct: 301 YSRETVKKLDVEQQSLLSQIPAQQQALAQAACHLDDANTLGKQAADNLQTNLPVIAQVRE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHL------------------RQWQQQLTHAEQKLNALAAI 402 ++ + ++ L + + QL + +Q ++ + Sbjct: 361 LDHNIRQQSQSLVEYNQRKDLLVGNAQILCQEIQNHQQTADRTKTQLNNIDQYFSSYPEL 420 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + T + + Q R L + + Q QLQ + ++++Q + Sbjct: 421 SDLDTDMTIFDSSCQ--RLRALLEDNSDFSAARISQHSLACQLQADFEILSKQQNTDLSL 478 Query: 463 LNEMRQRYK---------EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 + + R++ + Q LA ++ EQ I + + ++ + + Q L Sbjct: 479 IAQRREQLLNLQQQQAVVTQNQPLAIMRGEQEQIEHI-SAQIEQVRFKIKQRFELTRQIH 537 Query: 514 HPAVE-AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 + E V + +++ + + L A+ +++ R E+ L+ Sbjct: 538 KINLALPVLNQELTVLDDLIATHRVDIQSTKLKKHDKQTHL-ALLQKVARLEDYIVELKD 596 Query: 573 ---------------DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ 617 L +L++T Q I + E+ L Sbjct: 597 GTPCPLCGAHEHPYGQHHPLLDGQIDNKQALSLTQQTQQQISELETLIEHLEQALSKHHI 656 Query: 618 RHELQGQIAAHNQQI--------IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 H + + H QQ + I+ LL ++ + L+ Sbjct: 657 DHATKNEAINHQQQQLAPLQQQCEMLGKDIQDSLLLLFDANKNHSKAIAGSVHPLYQLSE 716 Query: 670 -------------------RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHC 710 Q +++ L L + LT + L + + Sbjct: 717 DINKPDIDSNSDIESTLSLLDSAKQKLLEQKQSLKDLLIQHDDLTASISELNIAIKSDEN 776 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFL 770 ++ V++ + + T++ + +L + + D + +L Sbjct: 777 QQQVLMSKLNNLTTDIKLHSQKAGTIEDKIAANFLALAAITSSILSLADKYPADSYREYL 836 Query: 771 AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ 830 + + T ++ + L+ + L + E + + L + + Sbjct: 837 SI---DFQRTDIQSALKQLDASIDEQTILDSSDYERHINRLRQQRSMLSQLKKHFNEQKN 893 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 Q L + QL D ++ + L+ +QV+ Sbjct: 894 SQQQLSNTLSTVRAQIDTKQAQLTSDESALKRLEHLIADKNVALEQVK 941 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 181/826 (21%), Positives = 340/826 (41%), Gaps = 39/826 (4%) Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q L + + E + S + + ++ + + + Q+ ++LA P N + + Sbjct: 497 TQNQPLAIMRGEQEQIEHISAQIEQVRFKIKQRFELTRQIHKINLALPVLN-----QELT 551 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD---- 356 +A R I+ + A ++ A + ++ + + H+ Sbjct: 552 VLDDLIATHRVDIQSTKLKKHDKQTHLALLQKVARLEDYIVELKDGTPCPLCGAHEHPYG 611 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN-------ALAAITLTLTAD 409 + + + S ++ + + + + H EQ L+ Sbjct: 612 QHHPLLDGQIDNKQALSLTQQTQQQISELETLIEHLEQALSKHHIDHATKNEAINHQQQQ 671 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 + ++ L+ L K +A + ++++ + + N + Sbjct: 672 LAPLQQQCEMLGKDIQDSLLLLFDANKNHSKAIAGSVHPLYQLSEDINKPDIDSNSDIES 731 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE-AYQALEPGVN 528 + + + EQ+ +K L Q L A S S + + V Sbjct: 732 TLSLLD--SAKQKLLEQKQSLKDLLIQHDDLTA--------SISELNIAIKSDENQQQVL 781 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA-LTQQWQAVTAS 587 S+L L ++K ++ T+ ++ A L + SL A +++ ++ Sbjct: 782 MSKLNNLTTDIKLHSQKAGTIEDKIAANFLALAAITSSILSLADKYPADSYREYLSIDFQ 841 Query: 588 LNITLQPLDDIQPWLDAQD-----EHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 L + +D Q ++ER + L Q+ + Q+ H + QQQ+ Sbjct: 842 RTDIQSALKQLDASIDEQTILDSSDYERHINRLRQQRSMLSQLKKHFNEQKNSQQQLSNT 901 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + + L ++ L + ++ + L Sbjct: 902 LSTVRAQIDTKQAQLTSDESALKRLEHLIADKNVALEQVKSDRTAIFADKNTESEDTLLR 961 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + + ++ + L S+Q+ + A +L QA F L+A+ Sbjct: 962 SAVDDAKAKQANAQRQLDSTQQVLAQLQSRQRQILAALQSATTALNTQQAVFLEHLEAAQ 1021 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F D+ AF+ A + ++ L K +++ +QA++ + T ++L Q+ Sbjct: 1022 FMDEDAFIRARLPKEERDALHLRKLAIDSALQQAKSQLDSTQQSLEQNL-----SLAMTN 1076 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + E I + ++ + + G I Q+LK + + + Q+ + I ++++ W Sbjct: 1077 ASQETIAAQHQHIQMEIDQLSQQIGAIVQKLKDNENQKGQRAAQLTAINVQKEKLKIWQQ 1136 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 L+ LIGS +G K+R FAQGLT + ++ AN QL ++ RYLL S LE+ V+D +Q Sbjct: 1137 LHILIGSADGKKYRTFAQGLTFEVMISHANSQLQKMSDRYLLIHDDSNPLELNVIDNYQG 1196 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 +R T+ LSGGE F++SLALAL LS + SH R+DSLFLDEGFGTLD E+LD ALD L Sbjct: 1197 GDIRSTKNLSGGEGFIISLALALGLSQMASHNIRVDSLFLDEGFGTLDEESLDIALDTLT 1256 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 L GK IG+ISHV+A+K+RI QIKV+KI+G G+S++ + Sbjct: 1257 GLQQEGKLIGIISHVQALKDRILTQIKVEKISG-GFSQISGQGCRR 1301 >UniRef50_Q1ZDG0 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZDG0_9GAMM Length = 1233 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 239/900 (26%), Positives = 394/900 (43%), Gaps = 36/900 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR +NLNSLKG WKIDF F NGLF ITG TGAGK+T+LDA+CLALY +TPR Sbjct: 1 MKILSLRFENLNSLKGHWKIDFQSAAFIENGLFVITGQTGAGKSTILDALCLALYQQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q++N+LMTR CLAEVEF VK +AYR FW QNRAR + G LQ P ELA + Sbjct: 61 LDKLTQAKNELMTRGEGSCLAEVEFSVKDKAYRVFWGQNRARKKGSGKLQAPTCELAEQS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GK+LA K D L+ LTGLD+ RFT+SMLL+QG FAAFLNA PK+RAELLEELTGTE Sbjct: 121 -GKVLASKSSDVLKQVVELTGLDFSRFTKSMLLAQGGFAAFLNATPKDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS +FE++K + E L Q+ + LT + L + +L +++QL+ + Sbjct: 180 IYAQISKHIFERNKEVQAEFTLLAQQSELIDRLTGPEKVQLEEDIALLHSQKEQLLLRIE 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 ++ W + LQ++ L+ A + Q+ + AQ A L+P + ++ Sbjct: 240 ATNNAVLWKHEEGRLQEKLEDILTQLKTAEQALQSFSVQVLKIENAQQALRLQPSFVKLK 299 Query: 301 EHS--------------AALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + ++ Q+ + LQ ++L A + ++ L Q+ Sbjct: 300 TQRQLFDDNELQSGIQKDKVDVLQVQVTQSQQELQRWVSLLAKAKQTRHQKMQCLTQELI 359 Query: 347 SLNTWLQE-----HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 ++ LQ D+ R + ++ L QQ L + + +L+ L Sbjct: 360 PMDAKLQTMTLDVQDKTRLNQQRESEYQQALQLMHQKETALEVQQQGLQNIKVQLDMLQD 419 Query: 402 ITLTL----TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 ++ T + T QH Q Q + + Q + + Q A+Q +++Q Sbjct: 420 SSIEQRDMGTMGHLLTTYEQHLLQLQCAQKTQSEIQEEKVQVEANQKQQKALQIASEQQY 479 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + + +E D ++ ++ TL Q+ LQ Q + Sbjct: 480 KTVLKKLDEIDLQQENILTSLDSGSMALAREQLSTLHQQKDNLQKLQQLTI-NVDVLMQA 538 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E + E +++L A +++ L +G TL + ++ LQ+D + + Sbjct: 539 ELDRRQEIHTLEAQLHADNTQLESLEAQGKTLNREASDLSLLLQQDNALRSLQQLQLELK 598 Query: 578 TQQWQAVTASLNIT-----LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 Q + +L L PLD + + E + +L+GQI + Sbjct: 599 AHQPCPLCGALEHPAIGSLLVPLDRSATEQRFKHKDEALQTKRGEYDQLKGQIQGSKNYL 658 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT----RQQEAQSWQQRQNELTALQ 688 Q++Q QQ + + L+ E S+ T ++ + +LTA Sbjct: 659 QALMDQLQQLQQKIQEAQKNWLLSPYVNAENISYQVTTSTLLTEKLSIQTAQMQQLTAQI 718 Query: 689 NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 R+Q++ + L + E + W+ L + + Q + + ++ Sbjct: 719 TRLQEIDEQRQPLIKEKERNLAKANEAQGRWQVTFTLQQGLDEKVHQVALQLDVLNREME 778 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + + + D + ++ Q++ L Q QTL + AE Sbjct: 779 NLKTNIQSIVTDKTQLDALFKAPVIWWDKQQKIAGQVENLLIKQNNNTQTL--KDAEHSV 836 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 Q Q + + +TV+ + ++ +T +L ++ + + Q + Sbjct: 837 QLQSQQTEQYHIITVSTQVELEKFKETKNQLENTRVQGFGVQTHQQLQLEYENQYAQVQA 896 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 202/861 (23%), Positives = 348/861 (40%), Gaps = 26/861 (3%) Query: 201 EKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEAS 260 ++ +++ L ++ +L Q L + + QL Q + + + L Sbjct: 380 QQRESEYQQALQLMHQKETALEVQQQGLQNIKVQLDMLQDSSIEQRD-MGTMGHLLTTYE 438 Query: 261 RRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH--WERIAEHSAALAHIRQQIEEVNT 318 + LQ A + + Q + + Q + ++ L I Q E + T Sbjct: 439 QHLLQLQCAQKTQSEIQEEKVQVEANQKQQKALQIASEQQYKTVLKKLDEIDLQQENILT 498 Query: 319 RLQSTMALRASIRHHAAKQSAELQQQQQSL--------NTWLQEHDRFRQWNNEPAGWRA 370 L S A + Q + Q+ Q L L + Sbjct: 499 SLDSGSMALAREQLSTLHQQKDNLQKLQQLTINVDVLMQAELDRRQEIHTLEAQLHADNT 558 Query: 371 QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVA 430 Q + + L + L+ Q+ NAL ++ + + Sbjct: 559 QLESLEAQGKTLNREASDLSLLLQQDNALRSLQQLQLELKAHQPCPLCGALEHPAIGSLL 618 Query: 431 LHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI 490 + ++R A+Q E Q + + + QL ++ ++ + Sbjct: 619 VPLDRSATEQRFKHKDEALQTKRGEYDQLKGQIQGSKNYLQALMDQLQQLQQKIQEAQKN 678 Query: 491 KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLR 550 L + + + +L A ++++ E+ L Sbjct: 679 WLLSPYVNAENISYQ------VTTSTLLTEKLSIQTAQMQQLTAQITRLQEIDEQRQPLI 732 Query: 551 GQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHER 610 + + + + Q +Q L ++ V L++ + +++++ + + + Sbjct: 733 KEKERNLAKANEAQGRWQVTFTLQQGLDEKVHQVALQLDVLNREMENLKTNIQSIVTDKT 792 Query: 611 QLRLLSQRHELQ-GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 QL L + + + Q+ + Q L L Q ++ + Sbjct: 793 QLDALFKAPVIWWDKQQKIAGQVENLLIKQNNNTQTLKDAEHSVQLQSQQTEQYHIITVS 852 Query: 670 RQQEAQSWQQRQNELTALQNR---IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQC 726 Q E + +++ +N+L + + +Q + V EN Q+ + Sbjct: 853 TQVELEKFKETKNQLENTRVQGFGVQTHQQLQLEYENQYAQVQASFDVSSENVTQLSIKL 912 Query: 727 LALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLK 786 L L + ++AQ+ + L SVF F AL+DE+ L++L+ Sbjct: 913 EGTQGAYTQLLSTQPLLKTAQKEAQSTLENKLLNSVFSTIDDFKVALLDEEELSRLQSQH 972 Query: 787 QNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQ 846 +Q T + HQ+ + + + Q+ + + + + Sbjct: 973 TQHSDQLLAKNTQRKSLEHEILMHQEKQL-----IADDMTQLIHQKETFNSQETLINETL 1027 Query: 847 GEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 + + D N ++Q L + + +W LN LIG +G KFR+FAQGLTLDN Sbjct: 1028 ISKKTLQRTDDINTEKQGELQIKRQLSQENALEWELLNKLIGQADGSKFREFAQGLTLDN 1087 Query: 907 LVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 LV+LANQ++ L RY L+R + E L ++V+D WQA+++RD RTLSGGESFLVSL LALA Sbjct: 1088 LVYLANQEMANLDPRYQLKRNSDEKLALQVIDCWQANSIRDVRTLSGGESFLVSLGLALA 1147 Query: 967 LSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 LS+LVSHKTRI+SLFLDEGFGTLD TLD AL+AL+ LN++GK IG+ISHV A+KERI Sbjct: 1148 LSNLVSHKTRIESLFLDEGFGTLDENTLDIALNALERLNSTGKLIGIISHVSALKERINH 1207 Query: 1027 QIKVKKINGLGYSKLESTFAV 1047 QI+V K G GYSKL+S + Sbjct: 1208 QIQVHKGTGAGYSKLDSQYKF 1228 >UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WT34_9DELT Length = 1230 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 227/921 (24%), Positives = 388/921 (42%), Gaps = 37/921 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I ++R +NLNSL G W+ID TR F S G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MRIQNIRFQNLNSLTGVWEIDLTRPDFVSAGIFAITGPTGAGKTTILDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L +S S+N++M+R T EC+AEV F++ G YR WSQ RAR P+G LQ R E+A Sbjct: 61 LKTLSDSENEIMSRQTGECMAEVVFQIASGRRYRCHWSQRRARKSPEGRLQAARHEIADA 120 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 G+I+ + +D + +TGLD+ RFTRSM+L+QG F+AFL+A RA +LE +TGT Sbjct: 121 DSGQIICAQKRDMARVVTEITGLDFDRFTRSMMLAQGGFSAFLDASADSRAPILESITGT 180 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E Y +IS +V E+H+ + LE ++ + +G LL ++ Q+L L L D+ +Q Sbjct: 181 EKYSRISMLVHERHRQEKLLLEDMRKELAGKPLLPVDEEQALRQQLSRLEDQSRQSKIRL 240 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 QQ QQ+L WL D + + ++ + ++ + +E+ +PQ L AQ A L + + Sbjct: 241 QQLQQALQWLQGLDTARGQLAQIEAEEEKLVLKEQAFRPQALRLEQAQRAARLEGSYSAL 300 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + + +Q + T L RH + + +L+Q + + R Sbjct: 301 LQLRHQQNLLTEQRQNHATELPRLQEKLQEARHKQDECARQLEQAKAEQARQTPLLHQVR 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE--VATALAQ 417 + + + + + +RQ +Q L + + ++ + + V + L + Sbjct: 361 ALDIQLESSEKEVRRVLLE---VRQQEQALASLKARCDSRRQALDDILRQQASVESWLEK 417 Query: 418 HAEQRPLRQHLVALH---GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 HA L + L + + +++ Q +A++ ++Q+ + NA L E + + Sbjct: 418 HAADAGLVEQLSGIEAGIQRAHDLEQKQQQRDMALRQISQQLEKGNARLAERLRHQEVAA 477 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCP------------LCGSTSHPAVEAYQA 522 +LA V+ +Q K + L Q + S + + Sbjct: 478 AELAQVENRRQQLVEEKEKLLEGRSLLQWQEEYNGIQKKILLLQAVEKSLKDVFLYHAEL 537 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 + + K L E+ LR L+ L+R+ A + EQ + Sbjct: 538 QRWRQQLQQWQEQREQSKALLEQQQALRDALEISLASLERERMLALRIASLEQHRASLEE 597 Query: 583 A----VTASLNIT--LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + SL LQ L W +D R Q L+ ++ Q ++ Sbjct: 598 GHACPLCGSLEHPYLLQGLPASDNWQQVEDVRRRFAMTDQQCAALRERLTGLEQNLLVGM 657 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ--- 693 + Q L + A + + A +++Q LT L ++ Q Sbjct: 658 ENARSLQDKLQGSQEYLAQLAEKAGLPSLLREPPESAATFVREQQERLTELLRQLYQRIS 717 Query: 694 ----LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 L L + ++T++ + Q + ++QQ ++Q+ Q ++ Sbjct: 718 AAGKLEETCRMLESNVPRMQEQKTMLDQAVEQFKHELALATAEQQRMRQELAQLRQEGEQ 777 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 + DT L A L + L + + + +Q Sbjct: 778 GRQALDTMLAAYGLGIAGGELLHISS--ALKTRRTEWERQTAALSRLAASRQELELAASQ 835 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 H Q L + ++ Q KL E + + + +AD Q Q+ Sbjct: 836 HDQEVKSQQAHLESQQREAREREGQWK-KLHEQRLALFAEKDVQEVEADLAQAVTRDEQR 894 Query: 870 IAQMTQQVEDWGYLNSLIGSK 890 +A T V + ++ S Sbjct: 895 LADQTAAVSRMSDVVTMTESA 915 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 231/927 (24%), Positives = 374/927 (40%), Gaps = 102/927 (11%) Query: 206 QASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQA 265 Q L EQ Q+ L L ++ ++ Q + + L + Q + +A Sbjct: 302 QLRHQQNLLTEQRQNHATELPRLQEKLQEARHKQDECARQLEQAKAEQARQTPLLHQVRA 361 Query: 266 LQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMA 325 L E + + + L + Q + L R AL I +Q V + L+ A Sbjct: 362 LD-IQLESSEKEVRRVLLEVRQQEQALASLKARCDSRRQALDDILRQQASVESWLE-KHA 419 Query: 326 LRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQW 385 A + + A +Q+ Q RQ + + A+ +++ +E Sbjct: 420 ADAGLVEQLSGIEAGIQRAHDLEQKQQQRDMALRQISQQLEKGNARLAERLRHQEVAAAE 479 Query: 386 QQQLTHAEQKL-NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 Q+ + Q+L + + + ++ L Q + + L + Sbjct: 480 LAQVENRRQQLVEEKEKLLEGRSLLQWQEEYNGIQKKILLLQAVEKSLKDVFLYHAELQR 539 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 + +Q +++ Q A L + + LA ++ RI +LE RA L+ G Sbjct: 540 WRQQLQQWQEQREQSKALLEQQQALRDALEISLASLERERMLALRIASLEQHRASLEEGH 599 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 CPLCGS HP + Q L N ++ + ++ A LR +L + + L Sbjct: 600 ACPLCGSLEHPYL--LQGLPASDNWQQVEDVRRRFAMTDQQCAALRERLTGLEQNLLVGM 657 Query: 565 NEAQSLRQDEQ---------------------------------------ALTQQWQAVT 585 A+SL+ Q L Q +Q ++ Sbjct: 658 ENARSLQDKLQGSQEYLAQLAEKAGLPSLLREPPESAATFVREQQERLTELLRQLYQRIS 717 Query: 586 AS--LNITLQPLDDIQPWLDAQDE--HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A+ L T + L+ P + Q + + + + Q++ Q +Q+ EQ Sbjct: 718 AAGKLEETCRMLESNVPRMQEQKTMLDQAVEQFKHELALATAEQQRMRQELAQLRQEGEQ 777 Query: 642 RQQLLLTTLTGYALTLPQED--EEESWLATRQQEAQSWQQRQNELTALQNRIQ----QLT 695 +Q L T L Y L + + S L TR+ E + + L A + ++ Q Sbjct: 778 GRQALDTMLAAYGLGIAGGELLHISSALKTRRTEWERQTAALSRLAASRQELELAASQHD 837 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ---- 751 +++ E E W+++HEQ LAL +++ + + LA + Q Sbjct: 838 QEVKSQQAHLESQQREAREREGQWKKLHEQRLALFAEKDVQEVEADLAQAVTRDEQRLAD 897 Query: 752 -------------------------------------AQFDTALQASVFDDQQAFLAALM 774 F LQ F D+++FL A + Sbjct: 898 QTAAVSRMSDVVTMTESAIREKDALLASIAEQTVHAGQAFAQGLQQEAFTDERSFLQACL 957 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 + LE+L Q L R + E LA T E++ QELA Sbjct: 958 PAEEREGLERLSQELHEVRMELAGRSRAAREHLATETAKALT-----TKNREELGQELAT 1012 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 + QG Q+L + RQ+Q+ L+++I Q + E W L LIGS +G K Sbjct: 1013 LEHQQAALQQEQGSCLQRLADNERVRQEQRLLVERIEQQERVFEQWSALQELIGSADGKK 1072 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 FR Q + L+ +V AN+QL ++ RY+L+ + LE+ + D +QA +R T+ LSGG Sbjct: 1073 FRNIVQQMNLELMVAHANRQLVKMTDRYVLE-VGNGPLELNIHDNYQAGELRSTKNLSGG 1131 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 ESFLVSLALAL LS + S TR+DSLFLDEGFGTLD + LDTAL L +L GK IG+I Sbjct: 1132 ESFLVSLALALGLSQMASRTTRVDSLFLDEGFGTLDEDALDTALSTLASLQQRGKLIGII 1191 Query: 1015 SHVEAMKERIPVQIKVKKINGLGYSKL 1041 SHV+ +KER+P QI+V + G G S++ Sbjct: 1192 SHVQGLKERVPTQIEVLPV-GGGRSRI 1217 >UniRef50_D1NTD8 Exonuclease SbcC n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTD8_9BIFI Length = 1224 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 205/1235 (16%), Positives = 398/1235 (32%), Gaps = 206/1235 (16%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 K++ L + + + +D R + N +F I G TG+GK+ +LDA+ ALY + L Sbjct: 4 KLIGLCFEGIGPYASAFSLDLAR--LSRNHMFLIEGCTGSGKSMILDALVFALYGDVSSL 61 Query: 62 SNV---SQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP------ 112 + ++ ++ + E ++ FE G+ Y + + G Sbjct: 62 NGGEEKARLRSRFLDHSRRETSVKLVFENNGDYYYVHRTPKYMVPKQSGTGATEHKPSGT 121 Query: 113 --------RVELARCADGKILAD------------------------KVKDKLELTATLT 140 R D ++AD +V + + Sbjct: 122 LLKVAPHMRDAFESLVDRHMVADTDEHSADEYFEFCEHADNAEPLCVQVGAVGTMIEQIV 181 Query: 141 GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTEL 200 GL+ +F ++++L QGQF+ FL KP+ER+ ++++L Y +I + + ++ Sbjct: 182 GLNRQQFCQTVILPQGQFSRFLRLKPEERSSMVKDLFAAADYERIQHELRDMRLERGAQV 241 Query: 201 EKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEAS 260 + + + S D E + ++ + + Sbjct: 242 ATRRTRLESAIATARDAALRCLNSTDADLDAEAGAMDCAAAVVEAQAQSEAAARDAERDA 301 Query: 261 RRQQALQQALAEE--------------EKAQPQLAALSLAQPARNLRPHWERIAEHSAAL 306 ++ + L ++ + A + +E+ L Sbjct: 302 LARECVDNLLDSLLPAGDSTQVAPTDCDEFAADHGHSAQDAAADVIESPYEQSTPIGDNL 361 Query: 307 AHIRQQI-------------------------EEVNTRLQSTMALRASIRHHAAKQSAEL 341 A R E+VN + + H Q A+ Sbjct: 362 ADERAWCVDVDGALLEPAMDVAAIEHQLTHVAEQVNAHAEEQHDRTSGQLHERETQVAQA 421 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q L Q NE AQ + R + + Q + A+ A Sbjct: 422 QHVHDQLQQITSVLQDIAQTVNEQHELAAQSPRMDQLRAWIERSNQAKPVSILHYQAIEA 481 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L + E A+ Q + + R+AQ + AI + ++ Sbjct: 482 ARLQHESGEELQAVDQQIATLTEPYGGIDGLHAAHDELNRIAQREPAIVAGLELVVEKER 541 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 L + Q Q AD++ + E + L +E Y+ Sbjct: 542 KLAAVAQTKARTEQLAADLQAAEDHYRSCVDDEQRIGAL----------GNQVERIEHYE 591 Query: 522 AL--EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 L G + L + V E LDA + AQ + + AL Sbjct: 592 QLLEARGTRERELQDAQTLVSDWDETDRMREALLDAQARLHDAQSRRAQVRGRLDAALQD 651 Query: 580 QWQAVTASLNITLQP--------------LDDIQPWLDA-----------QDEHERQLRL 614 + + L+P L ++ A + E RL Sbjct: 652 RLVVGLVQIADQLEPGQPCPVCGSLEHPKLAQMREASTAGGATEHVTNAEINYREELERL 711 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQR--------QQLLLTTLTGYALTLPQEDEEESW 666 ++ E +A Q+ + Q ++++ ++ + + + +E + Sbjct: 712 RAEHDEALAGESAQQIQVTRMQTRLDELTAAIAGRSREQAIQWRDEAQRAVNESNEARAH 771 Query: 667 LATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ----------------------- 703 LA +Q A+ + + ++ + + + +L+T Q Sbjct: 772 LAQARQIAKQIVEVREQVQHAKEKAETTAAMLDTEHQHYQAAQQAAQGLEPEALQAERSR 831 Query: 704 --SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + L + E+ ALH ++ L + + A A+F A + + Sbjct: 832 LEQERHDALQAAGQLPGLQNTIERVSALHKERTLLATKLAERTAVSEHANAEFLRACKEA 891 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F D + AA++ + L + + +R + Q LA L L Sbjct: 892 GFADGTSAAAAVLSDVDLDHYAGQLKEYDERRAALASQAHQLRTQLAILLSPESVSSLRL 951 Query: 822 TV------------------TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 + +Q+ A H+ + + + ++ Sbjct: 952 ALPTALYISDEARETAILAAASASLQRATATLHEAQASRDAAIRDQQSAMECWEQCANAN 1011 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK---------FRKFAQGLTLDNLVHLANQQ 914 +T++ + +Q Q + + L + G + +A +++ AN Sbjct: 1012 RTMLAEASQWAQAMHAYEPLRRMAELVTGGRDSGAERKTTLITYAVTERFRDVLARANDL 1071 Query: 915 LTRLHGRYLLQRKASE----------------------ALEVEVVDTWQADAVRDTRTLS 952 L + Y R + L + + D + D D TLS Sbjct: 1072 LRDIRDGYYELRLGDQDNESADGTMSVNAPRMRANHKTGLPILIYDR-RCDTCADPDTLS 1130 Query: 953 GGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 GGE F VSLALALAL+D++ + R+++LF+DEGFG+L ++ LD +D L+ + + Sbjct: 1131 GGERFFVSLALALALADIIEGENGGVRMETLFIDEGFGSLSADVLDEVMDVLEEV-GRSR 1189 Query: 1010 TIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 TIG+ISHV ++ ERI I V + G S + Sbjct: 1190 TIGIISHVGSLVERIGDCIMVSREREDGPSTISVR 1224 >UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNB0_CHIPD Length = 1244 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 206/920 (22%), Positives = 375/920 (40%), Gaps = 53/920 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL+ +IDFT+EP + G+FAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MKILAIRFKNLASLEDTNEIDFTKEPLSKAGIFAITGPTGAGKSTLLDALCLALYARTPR 60 Query: 61 LSNVSQSQ----------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARN 103 ++ ++ TAE AEVEF V G Y+A W+ RARN Sbjct: 61 YLQAKETGIEIQDQGGNKISQGDVRGILRDGTAEGFAEVEFAGVDGNNYKARWAVKRARN 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + DGNLQ VEL + K + L + GL++ +FTRS+LL+QG F AFL Sbjct: 121 KIDGNLQADTVELFNLTTNGVFPGKKTETLREIERVVGLNFEQFTRSVLLAQGDFTAFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A +A LLE+LTGT IY +IS ++ + K A TEL L+ Q +G+ LT E+ +L A Sbjct: 181 ADKDAKASLLEKLTGTNIYSEISVGIYNKFKEADTELRNLKQQVAGIERLTEEERMALHA 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L + + +++W D L++ + QQA E A ++ Sbjct: 241 QQEELGAKISSQQITIAELGAAISWYQLLDTLEKNREQATDQYQQATLAMENAGERIRNF 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 +L + + R E H LA + ++E++ R+ T + A + Sbjct: 301 TLVEHVQAARGPVEARRSHEQQLAEKEKALQEIDARIMRTTEAQQQAATALETAHAAVLH 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQ-LTHAEQKLNALAAI 402 QQ + R R+ + Q Q ++ + ++ Q L E+K + + Sbjct: 361 AQQEAAKHQPDITRARELDTLTGEKDRQLQQAVTEAANAQKQQDAHLKAFEEKEKEIHTL 420 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT---QR 459 ++ ++ H ++ + ++++ + Q+ K L Q A++ + + + Sbjct: 421 AQAIS--KLEDWQRDHLGRKDIAENIIEISAQLGHTAKLLPVQQEALKEQQENASFIRKA 478 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + +++++ ++ + A ++T ++ ++ + A Sbjct: 479 QEQITDLQEKADKEQAESARLQTELDEANKLLQAVPLETLKEKDTRLDQQIREGEAAKIH 538 Query: 520 YQALEPGVNQSRLLA--LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 ++ L + + A LEN ++L E+ A L+ + +T + E + L Q + Sbjct: 539 WERLFGSLQEKEKTARQLENCAQELKEKTAALQEKQAELTIAQAKKEQSDKLLHQARLQV 598 Query: 578 TQQWQAVTASLNITL---------QPLDDIQPWLDA-----QDEHERQLR-------LLS 616 + +++ A L P P A ++E+ LR +S Sbjct: 599 AENVESLRAQLVQDEPCPVCGSKAHPFVTDNPLAHAMLKTLEEEYNAALRYYNTLSGDIS 658 Query: 617 QRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT-RQQEAQ 675 + ++ ++ + Q+ + L G++L + + A +++ Q Sbjct: 659 SLEQFCKKLLLDSETFNKSLQERVTQIASLEEKWAGFSLAAASKAAPDENKAQWLEEQVQ 718 Query: 676 SWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT 735 Q Q E+ +ETL ++ + E + + + Q+ Sbjct: 719 QLQTAQKEIAVQLKAYDAQRNAVETLKSQLDIKQQALSANKEQLKDRQREKTSKEEAQER 778 Query: 736 LQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 + +Q +SL+ Q + D + + + +Q KQ E Sbjct: 779 IARQLEHITESLRTMTEQLAPHFSNPDWVDNWKKDPQGFNAKIVAFAQQWKQQAEAIIAN 838 Query: 796 AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG-----EIR 850 Q L + L + + P AL+ + +QQ+ A + +E Sbjct: 839 NQQLR-EHQSALQEMGRQGPAIAAALSEKINALQQQQAAFNALQQERQALLNGATVISFE 897 Query: 851 QQLKQDADNRQQQQTLMQQI 870 Q+LKQ + Q ++ Sbjct: 898 QRLKQVIEQAVLTQQTATEV 917 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 217/906 (23%), Positives = 363/906 (40%), Gaps = 63/906 (6%) Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQA-QASGVTLLTPEQVQSLTASLQV 227 RA L+ LTG E Q+ V E + + + L+A + + T Q S Q Sbjct: 374 RARELDTLTG-EKDRQLQQAVTEAANAQKQQDAHLKAFEEKEKEIHTLAQAISKLEDWQR 432 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ 287 K + + L + +QQEA + QQ + + ++ L + + Sbjct: 433 DHLGRKDIAENIIEISAQLGHTAKLLPVQQEALKEQQENASFIRKAQEQITDLQEKADKE 492 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 A + R E + A + ++E +TRL + + + H + LQ+++++ Sbjct: 493 QAESARLQTELDEANKLLQAVPLETLKEKDTRLDQQIREGEAAKIHWERLFGSLQEKEKT 552 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQW-QQQLTHAEQKLNALAAITLTL 406 ++ +A+ + + +E + Q + + +L A + Sbjct: 553 ARQLENCAQELKEKTAALQEKQAELTIAQAKKEQSDKLLHQARLQVAENVESLRAQLVQD 612 Query: 407 TADEVATALAQ---------HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 V + A HA + L + A ++ L+ + + + Sbjct: 613 EPCPVCGSKAHPFVTDNPLAHAMLKTLEEEYNAALRYYNTLSGDISSLEQFCKKLLLDSE 672 Query: 458 QRNAALNEMRQRYKEKTQQ-----LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 N +L E + ++ LA E + + LE Q QLQ Q Sbjct: 673 TFNKSLQERVTQIASLEEKWAGFSLAAASKAAPDENKAQWLEEQVQQLQTAQK------- 725 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 E V A N V+ L + + L A +QL+ + E S + Sbjct: 726 -----------EIAVQLKAYDAQRNAVETLKSQLDIKQQALSANKEQLKDRQREKTSKEE 774 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR-LLSQRHELQGQIAAHNQQ 631 ++ + +Q + +T SL + L D D ++ + ++ Q + Sbjct: 775 AQERIARQLEHITESLRTMTEQLAPHFSNPDWVDNWKKDPQGFNAKIVAFAQQWKQQAEA 834 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 II QQ+ + Q L E+ + L +Q + QQ + L I Sbjct: 835 IIANNQQLREHQSALQEMGRQGPAIAAALSEKINALQQQQAAFNALQQERQALLNGATVI 894 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + L Q E + E + E A + + T ++ K + Sbjct: 895 S----FEQRLKQVIEQAVLTQQTATEVFNTGKEDLRAYTASKDTTTADITNIRSNIDKER 950 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQL-----------EQLKQNLENQRRQAQTLV 800 A L+ + A + + E+TLTQL + L + Q + Sbjct: 951 AAIGAWLK-----NYTATYGSTLTEETLTQLLSHTAAWIETERKAITALRDAVNTTQATL 1005 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 + + L+ HQ+ R D ++E + + Q L + + + +L+QD +N+ Sbjct: 1006 IERSLQLSNHQEKRVSDQ-----SLEALTASSNEAKQVLEDLGREKNNLAYRLRQDEENK 1060 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG 920 + L I T E+W LN LIGS +G KFR+ AQ TLD L+ AN L+ L Sbjct: 1061 LKIGDLQYTIDAKTAVHENWSKLNELIGSADGKKFRQIAQEYTLDMLLDHANMHLSMLTR 1120 Query: 921 RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSL 980 RY L R L ++V+D D +R +LSGGESFLVSLALAL L+ L S K +++SL Sbjct: 1121 RYKLLRIPGN-LALQVLDKDMGDELRTVFSLSGGESFLVSLALALGLASLSSSKMKVESL 1179 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 F+DEGFG LD +TL+ A+DAL+ L+ G+ +GVISHV+ M ERIP QIKV ++ G SK Sbjct: 1180 FIDEGFGALDPDTLNIAMDALERLHNQGRKVGVISHVQEMTERIPTQIKVIRM-ANGKSK 1238 Query: 1041 LESTFA 1046 +E T A Sbjct: 1239 VEVTGA 1244 >UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW76_SYNWW Length = 1223 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 202/917 (22%), Positives = 372/917 (40%), Gaps = 40/917 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI +R +NLNSL GEW IDF+ + S+G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MKIKQIRFQNLNSLVGEWIIDFSHPAYLSDGIFAITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T C AE+ FE + YR WSQ RAR P G LQ R E+A Sbjct: 61 LERVNKSSNEIMSRHTGSCYAEISFETREGYYRCHWSQQRARKNPQGELQPHRHEIADAH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K++D +TG+++ RFTRS++L+QG FAAFL A ERA +LE++TGTE Sbjct: 121 SGQILENKIRDVAARVERITGMNFTRFTRSIMLAQGGFAAFLQAPADERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L+ LQA+ SG+ LLT E+ ++L +Q K+ + Sbjct: 181 IYSEISRKVHERQREENDRLKILQAEISGIKLLTTEEEEALRQDMQAKIARGKERQEELK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q L+WL R + E ++ QQ L ++ Q + L A+ A L + R+ Sbjct: 241 GLQLVLDWLDRMVGWENEIKDIEEQWQQYLKRQQAFQGEAWRLEKARQAMVLDAPYIRLK 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + +IE + L EL + + + + + R+ Sbjct: 301 DLRDLQKSNLSEIERIREELPRQKEAAGKAAERWENSRQELIELKLLRKSEGETAKKVRE 360 Query: 361 ----WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA-- 414 + + + Q ++T +K + L + A Sbjct: 361 MDILLKQQGQVIKGMEVAIGTSENECSALQGEITSGVEKAKEMGQALLAIEEYRRKNAQD 420 Query: 415 ---LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 LA + + L L + + +A+Q++ + + A ++ + Sbjct: 421 AALLANLTGISRVFKRLEELLSTWQQKGLERQRAALALQSLLDARKEIAATHESNKELQR 480 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 ++ L + E+ + + R +L+ + + Sbjct: 481 QQYDVLQAEQDKLEEALQGYEIAWWRDELEQFKE-----QNDKLQNLGQVWDWMVQLEDN 535 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 + +++L E+ L +++ K+ L L + + + Sbjct: 536 IRNGRESIQQLDEQQKRLVWEIEQGEKEAGHLAARIDGLETRVLLLN-RIRDLEEERAQL 594 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + + + + + Q ++++ + ++ E + L + Sbjct: 595 EDGKACPLCGATEHPYAQGNIPQMDESQKELNQARKQHKKLSEDLKKKEILRGKLDKEVE 654 Query: 652 GYALTLPQED---EEESWLATRQQEAQSWQ----QRQNELTALQNRIQQLTPILETLPQS 704 + + + E+ES L + ++EL L N+ +Q + Sbjct: 655 HSGAAVKEAEQQLEKESKLRREGMNELGLDLSVVKTRDELERLANQSRQNIINHSRQLKM 714 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTL---QQQDVLAAQSLQKAQAQFDTALQAS 761 E + ++ + + + Q Q+Q + LQ+ L+ Sbjct: 715 IETWQKNIGTLTLHYEKSRTAFIQSDKELQAAILQQKQADQEDERLQQEYLSLQGELEQL 774 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + + M + L QL +++ L+ ++++ + + + L L Sbjct: 775 QEETLREISPYGMADLPLEQLAAIQKVLDERKKRWEA---------------KEKEKLDL 819 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 V+++ E+ Q L++ ++ R++LKQ + ++QQ ++ ++ Sbjct: 820 EKAVDKLHNEVEQKRILLKDKASALQSERERLKQQQEQYRRQQETRFELYGKRDPDKEEA 879 Query: 882 YLNSLIGSKEGDKFRKF 898 L+ IG E R + Sbjct: 880 RLDEEIGLAEELVNRTY 896 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 178/838 (21%), Positives = 354/838 (42%), Gaps = 30/838 (3%) Query: 204 QAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 +A+ G LL E+ + A L + ++ ++ L+ ++ +Q A+ Sbjct: 399 KAKEMGQALLAIEEYRRKNAQDAALLANLTGISRVFKRLEELLSTWQQKGLERQRAALAL 458 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSA--ALAHIRQQIEEVNTRLQ 321 Q+L A E L Q L+ +++ E +A R ++E+ + Sbjct: 459 QSLLDARKEIAATHESNKELQR-QQYDVLQAEQDKLEEALQGYEIAWWRDELEQFKEQND 517 Query: 322 STMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREH 381 L + + ++ ++S+ ++ R + + + E Sbjct: 518 KLQNL-GQVWDWMVQLEDNIRNGRESIQQLDEQQKRLVWEIEQGEKEAGHLAARIDGLET 576 Query: 382 LRQWQQQLTHAEQKLNALAAITL--TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 ++ E++ L A E A + ++ L Q Sbjct: 577 RVLLLNRIRDLEEERAQLEDGKACPLCGATEHPYAQGNIPQMDESQKELNQARKQHKKLS 636 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 + L + ++ + +E AA+ E Q+ +++++ + + + + + Sbjct: 637 EDLKKKEILRGKLDKEVEHSGAAVKEAEQQLEKESKLRREGMNELGLDLSVVKTRDELER 696 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L + + + G + +E Q ++ Sbjct: 697 LANQSRQNIINHSRQLKMIETWQKNIGTLTLHYEKSRTAFIQSDKELQAAILQQKQADQE 756 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS-QR 618 +R + E SL+ + + L ++ + + PL+ + DE +++ ++ Sbjct: 757 DERLQQEYLSLQGELEQLQEETLREISPYGMADLPLEQLAAIQKVLDERKKRWEAKEKEK 816 Query: 619 HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ 678 +L+ + + ++ Q + ++ + L + L +Q++ + Q Sbjct: 817 LDLEKAVDKLHNEVEQKRILLKDKASALQSERER--------------LKQQQEQYRRQQ 862 Query: 679 QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 + + EL ++ ++ + E + ++EL + E+ +++ L L +++TL Sbjct: 863 ETRFELYGKRDPDKEEARLDEEIGLAEELVNR----TYEDMQELQRHQLRLEEREKTLAV 918 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 A LQ ++ F LQ + F+ ++ + A + + L Q + L + + QT Sbjct: 919 TVQNRAPELQSSEESFTRQLQQAGFEQEEDYRQARLSLEEQQALAQKAEALTKEATELQT 978 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 + E L + ++ + E ++++ Q+L + G R+ L+ Sbjct: 979 RLKDRQEKLQREKEQKLS-----GEAREVLEEKQRLGEQELIDLREEIGAARRTLEDSEQ 1033 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 +R++ QT +Q++ + ++++ W L+ LIGS +G K+R FAQGL+ D ++ AN+QL ++ Sbjct: 1034 SRRRMQTQLQRVEEQKKELQRWQLLHDLIGSADGKKYRNFAQGLSFDIMIKHANRQLHKM 1093 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRID 978 RY+L R + LE+ ++D +QA +R T LSGGESFLVSLALAL LS + S K +D Sbjct: 1094 SDRYILLRSQEQPLELNIIDNYQAGEIRSTANLSGGESFLVSLALALGLSQMASRKVSVD 1153 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 SLFLDEGFG LD + LDTAL+ L L GK IGVISHV A+KERI QI+V +G Sbjct: 1154 SLFLDEGFGALDEDVLDTALNTLAGLQQDGKLIGVISHVPALKERISTQIEVITQSGG 1211 >UniRef50_B2S1H4 Exonuclease SbcC n=25 Tax=Borrelia RepID=B2S1H4_BORHD Length = 978 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 188/1057 (17%), Positives = 403/1057 (38%), Gaps = 121/1057 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L KN+ S KGE++I+F +G+F I+G TGAGK+T+LD I LALY R Sbjct: 30 MRINKLVFKNIASYKGEYEINFDVSVLKRSGIFLISGNTGAGKSTILDCITLALYARIYR 89 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ D +++ ++ F V + Y +F N + + + L+ + Sbjct: 90 L---DKNIADSISKGFNSAYVKLTFTVSEKVYESFIELNIRQKE-----TPKNMILSCLS 141 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG ++ +K D L +L LD+ +F ++++L QG F FL +KPK + +++ + + Sbjct: 142 DGSLIENK-DDVLAYIKSLCRLDFEQFCQTVILPQGNFQEFLTSKPKSKTAIIDNIFNLK 200 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL-ITAQ 239 Y I + + ELE + + L E+ ++++ + L + L + Sbjct: 201 KYDDIEIFL-------KRELELTKFNKEKLEFLDMEEKNRVSSNKKKLNELTDFLGLVDI 253 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + +++L+ + + + ++ + Q E + L L+ ++ Sbjct: 254 EALKKNLDSVYKLIGICEKIIKFNQNYLGIQYRIENLE-----LELSSKVKSKEKLSHEY 308 Query: 300 AEHSAALAHIRQQIEEVNTR----LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 + + ++++ N+ L++ + ++ + + + S E Q+ L Sbjct: 309 LSQEKIKSELDEKLKFYNSNEFLDLKNFVKRQSELLNDKNRFSLEFSSIQKDLEELKYLD 368 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL 415 ++ + D + + +L E++L A L + Sbjct: 369 LDNFNFDYVKELYYENVLFCGIDFD--EKTYDRLIVKERQLEAQRKKLLLEQKRKNVEIK 426 Query: 416 AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 + +++ + + + +L + +N + + N N + Sbjct: 427 SITSQETTFNFDKYVYYEALKLLKGFYEELILKYKNGLELLLKSN---NSGSSQTIVMNI 483 Query: 476 QLADVKTICEQ-EARIKTLEAQRAQLQAGQPCP--LCGSTSHPAVEAYQALEPGVNQSRL 532 ++ K E ++ +++ L+ + G ++ E S+L Sbjct: 484 RIGLYKKFLEHLDSNKQSVAKDIDNLKHLEDAYKVYQGK---EKLKISSLNELLALNSKL 540 Query: 533 LALENEVKKLG-EEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L++E+ L + ++ + L +N A+ L++ Q L ++ + I Sbjct: 541 QILQSELDALKLDILNNKESKIKWESCVLNFKKNNAEILKRIGQNLFHKYIDYSNRDKIL 600 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + L + +L+ + N +I + +I++ + + L Sbjct: 601 VLEGK------------------LKEVADLKRMLNDLNSKISLKEVEIKENLDKIRSLLP 642 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 L + L + +++ ++N +L LE Sbjct: 643 DINLKVN--------LNDSALLEREFKKILRSKRDIENDHAKLNLSLE------------ 682 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 ++ L L SQ + ++Q + L+ A+F + S D ++A Sbjct: 683 ---------NINNSKLKLASQIEFMKQTILGFKMELKDELAKFTS----SFLDFKRARKN 729 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 + ++ L+ LK + + + + + D +Q Sbjct: 730 GFYVKDSIFSLDSLKPS-----KNSLEHFLKLKSNFMSQIEISSKDISKYEANFSSLQ-- 782 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 +L + I+ +L + + + L + + Sbjct: 783 --TLKAELSAQEINLENIKNELISVNERNDKLEILKKVVT-------------------T 821 Query: 892 GDKFRKFAQGLTLDNLVHLAN-QQLTRLHGRYLLQRKAS-EALEVEVVDTWQADAVRDTR 949 + + Q +D ++ ++N + L+ + + L+ + V + R + Sbjct: 822 SPSLKYYVQSFLIDEILSISNKKYLSIILPDFELEINTDSKDFNFLVKSKRDGNMTRSVK 881 Query: 950 TLSGGESFLVSLALALALSDLVS-HKTRIDSLFLDEGFGTLDSETLDTALDALDALNA-S 1007 TLSGGE FLVSL+L+LALSD++ + +I++ FLDEGFG+LD +TL + + L Sbjct: 882 TLSGGERFLVSLSLSLALSDMIRDSELKIEAFFLDEGFGSLDEDTLKMVIPKISELQRVD 941 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 G+ IG+ISHV +KE I QI V KI+ + +ES Sbjct: 942 GRQIGIISHVSYLKEEIKTQIVVSKISTVSNITIESF 978 >UniRef50_Q67MD3 DNA repair exonuclease n=1 Tax=Symbiobacterium thermophilum RepID=Q67MD3_SYMTH Length = 1200 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 221/1200 (18%), Positives = 406/1200 (33%), Gaps = 171/1200 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L S + +IDF GLF I GPTGAGK+T+LDAI LALY R Sbjct: 1 MRPIRLAFAGLQSYREPQEIDFRE--LMGAGLFGIFGPTGAGKSTILDAITLALYGRVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ +M + + F + G YR S R ++ P + R+ Sbjct: 59 ----TRGTMGIMNLNENRLWVKFTFALGGTEYRVERSYRREKDTPSIRSEHARLVRVLPE 114 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 ++LAD+ ++ + L GL+ FTR+++L QGQFA FL +R E+L+ + Sbjct: 115 GDEVLADREREVTQQVTDLLGLEIDDFTRAVVLPQGQFAEFLKLTGSKRTEMLQRIFALS 174 Query: 181 IYGQ-ISAMVFEQHKSARTELEKLQAQASGV-------TLLTPEQVQSLTASLQVLTDEE 232 YG ++ + + ++ +L+ + + G+ E ++ +TA+L + Sbjct: 175 QYGDVLNERLKRRKEAVERQLDAVAGEQRGLGDASAEAVSAAEEALRQVTAALAEAERQL 234 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 + ++ ++ + E +R + Q A + A ++ Sbjct: 235 ADTESRFKEWERVWQLQQELAGITDELARWEAQAQAVDAARAELDAARRADAVRPHLTAR 294 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 A A+A Q + + + A R + +Q+ L ++Q L + Sbjct: 295 DQAAAAAARAERAVALAEQAVRDAEAEVARAAQAYAEARTNRMEQAPALTRRQADLQRAV 354 Query: 353 QEHDRFRQWNNEP----------------------------AGWRAQFSQQTSDREHLR- 383 + DR + + A RA+ + + L Sbjct: 355 ELEDRLEEARRQAGEVEEQVAALREKHDAVVRQIGEAEKRAAALRARETGLQEEIARLEV 414 Query: 384 --QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 + + ++T A++ L+ L L E + E R+ + ++R Sbjct: 415 SPEERNRITDAQRALDRLREAERALLQAEQRVR-QREQELEHARRAAEQAEALRLEAERR 473 Query: 442 LAQLQVAIQNVTQEQTQRNAALNE-----------------MRQRYKEKTQQLADVKTIC 484 L +++ A+Q + E A L + +Y ++ + + Sbjct: 474 LQEVESALQRLETEPPADEADLRAQEAWLGRAGEQIRTVAGLAAQYAQRQAEADARRREW 533 Query: 485 EQEA-----------------------------------RIKTLEAQRAQLQAGQPCPLC 509 E+ A R A L G+PCP+C Sbjct: 534 EEAAARIEQALLEEAQQQQAVEAAEQEREAVRAAVAAARRRAHAAALAQALTPGEPCPVC 593 Query: 510 GSTSHPAVE--------AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 GS HP + ++RL A + + + E A R Q ++ ++ Sbjct: 594 GSREHPQPAVVGEAVNLEAEEARLEQAEARLRAAGSALGRAQERTAAAREQAESARRRQA 653 Query: 562 RDENEAQSLR--------------------QDEQALTQQWQAVTASLNITLQPLDDIQPW 601 E + R Q E+AL ++ + + Sbjct: 654 EAERALEEARLALEAARERLPAAWRSLAGPQLEEALAREAAEHEERARRFAGWREQVAAL 713 Query: 602 LDAQDEHERQLRLLSQRHELQGQIAAHNQQ------------------------------ 631 A++E R L + + AH +Q Sbjct: 714 QQAREERTRALFAAAGDARERQAAVAHAEQALADARAEADARRSAAAECAAQFDAVRDDL 773 Query: 632 ----IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQE----AQSWQQRQNE 683 + ++I + + A + E ES L + E A Q+ + Sbjct: 774 DAAGVEAALRRIRDADERVADLRRSLAEVRTGQQELESRLGALRTEEKRCADELQEARVR 833 Query: 684 LTALQNRIQQLTPILETLP--QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 R +++ L + L Q EQ A + + Q Sbjct: 834 HAQAVQRYEEVADQWRRLSGGEPARPQLTAVESRLTRLAQEEEQAAAAKERAERAHGQAE 893 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 A + + + + +A A + + + + Sbjct: 894 AARAAAVRELEVAHRHVAEAEAALAEALTVAGFESAEAARGALRLAARQAALDEEIRRHD 953 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 Q E L Q +++ E+ + + + Q R + E + ++ D Sbjct: 954 QEGERLKGRQAALEQQLAGRSISAEEWRAWVDRLEQARRSAAERREERARAMQVRDDLLA 1013 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-G 920 +Q+ + Q +L+ L G+ F F + + A+++L +L Sbjct: 1014 KQRRWQELEEQRLGLAARLDHLDELQKVLRGNAFVNFIAQEQMARVAADASRRLRQLTRD 1073 Query: 921 RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR--ID 978 RY L+ + V D +R TLSGGE+FL SL+LALALS + ++ Sbjct: 1074 RYTLEAAPDGS--FLVRDETNGGTLRSVNTLSGGETFLASLSLALALSAQIQLHGHYPLE 1131 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 FLDEGFGTLD E LD + L+ L+ +GVISHV ++ R+ ++ V+ G Sbjct: 1132 FFFLDEGFGTLDPELLDVVISTLERLHFDRLNVGVISHVAELRNRLHRRVIVEPAEPGGR 1191 >UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN2_CRYCD Length = 953 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 157/788 (19%), Positives = 284/788 (36%), Gaps = 48/788 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LSL L IDF+ F +G+F I GPTG+GKTTL DA+ AL+ E Sbjct: 1 MRPLSLELCAFGPYADRVFIDFS--LFGESGVFLICGPTGSGKTTLFDAMKFALFGEASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR---VELA 117 + S T E E FE G+ YRA + +R++ G EL Sbjct: 59 TRRPTSSFASGFANATTEPFVEFIFEQAGKTYRARRVPHYSRSKKRGVGTTAAGGAAELV 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 G ++A K E L G+ +F++ ++++QG F+ L A K+RAE+ + Sbjct: 119 CETTGSVIASKANAMDEAVVDLLGITTEQFSQIVMIAQGDFSQLLTANTKQRAEIFRRIF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 TE Y I + E+ ++ +E + QA L L + T + Sbjct: 179 HTEPYQHIQERLVERKRTLEQHVEASEEQARIHLAL-------LASENAPETTMPNDEVA 231 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 QQ+ +L + Q + ++++ A E+ P S+ ++ Sbjct: 232 GQQEVFLTLKGPIPSADKQGDPFAFERSVPSA---GEQDNPFTFEGSVLSRLDDIEKELA 288 Query: 298 RIAEHSAALAH-IRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 IA H H + +Q E TRLQ S R Q+ +L+++ ++L EH+ Sbjct: 289 NIAAHDDMRKHSLTKQQAEAETRLQEIDRNLGSAR-----QTTQLEKRLAETTSYLVEHE 343 Query: 357 ---RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 + Q N + A + S+ + + +L + A Sbjct: 344 NAYQTAQANWQTAQAEEGLRHRLSEDIATATEKARTLSEVSRLEGQHTTAQSKVAASQKA 403 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI--QNVTQEQTQRNAALNEMRQRYK 471 A RQ L + AQL+ A + + + ++ A ++ M+Q+ + Sbjct: 404 ATETETALHQARQQLEEIAEAAKRVHDAPAQLERARNDERLIADALEQTALVDRMKQQTQ 463 Query: 472 EKTQQLADVKTICEQEA----------RIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 T AD + Q L G PCP+CGS HP Sbjct: 464 TTTAAFADAQERYAQARADTTQATNAFFAAQAGILARSLSTGTPCPVCGSKEHPHPAHLA 523 Query: 522 ALEPGVN--QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 A P + + L E G L A QL+R +L Q+ Sbjct: 524 ADAPTQAYIDTLQATEQTARTHLEEAGNKLAADKAAEDAQLKRATQALAALPPTYQSERI 583 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEH-ERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 + + + ++ D Q + RL +L+ + A + +IQ Q+ Sbjct: 584 DTGKLATARTAIATRISELNAATDQQKQLTNEANRLSCMVPDLEEKARAASDTLIQAQRN 643 Query: 639 IEQRQQLL--LTTLTGYALTLPQEDEEESWLATRQQEAQS-------WQQRQNELTALQN 689 + + L YA L + + + + + W++++ Sbjct: 644 EAEIAASINALRATADYANALQAQKTIDDLRSRLEAAQKRFTVAQATWEEQRRAHDEHVA 703 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 R ++L L P + E+ +++ R+ + +Q ++ ++A + + + Sbjct: 704 RKKELEEQLAVAPHFNVATLEEQRILVVQTRKNTVAEITTIESRQATNEKALVALKKIAQ 763 Query: 750 AQAQFDTA 757 + + + Sbjct: 764 SSQRIEEE 771 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 142/784 (18%), Positives = 279/784 (35%), Gaps = 82/784 (10%) Query: 327 RASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQ 386 I+ ++ L+Q ++ + H N P + +E + Sbjct: 183 YQHIQERLVERKRTLEQHVEASEEQARIHLALLASENAPET-TMPNDEVAGQQEVFLTLK 241 Query: 387 QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQ 446 + A+++ + A +A E + I A Sbjct: 242 GPIPSADKQGDPFAFERSVPSAGEQDNPFTFEGSVLSRLDDIEKELANIA------AHDD 295 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 + ++T++Q + L E+ + Q K + E + + E QA Sbjct: 296 MRKHSLTKQQAEAETRLQEIDRNLGSARQTTQLEKRLAETTSYLVEHENAYQTAQANWQ- 354 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 + ++ E + +EV +L + T + ++ A K E Sbjct: 355 ----TAQAEEGLRHRLSEDIATATEKARTLSEVSRLEGQHTTAQSKVAASQKAATETETA 410 Query: 567 AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIA 626 RQ + + + + V + + +D + DA ++ R+ Q A Sbjct: 411 LHQARQQLEEIAEAAKRVHDAPAQLERARNDERLIADALEQTALVDRMKQQTQTTTAAFA 470 Query: 627 AHNQQIIQYQQQIEQRQQLLLTTLTGY-------------------------ALTLPQED 661 ++ Q + Q G A P + Sbjct: 471 DAQERYAQARADTTQATNAFFAAQAGILARSLSTGTPCPVCGSKEHPHPAHLAADAPTQA 530 Query: 662 EEESWLATRQQEAQSWQQRQNELTA--------LQNRIQQLTPI-------------LET 700 ++ AT Q ++ N+L A L+ Q L + L T Sbjct: 531 YIDTLQATEQTARTHLEEAGNKLAADKAAEDAQLKRATQALAALPPTYQSERIDTGKLAT 590 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + E + +Q+ + L L+++ A+ +L +AQ + + A Sbjct: 591 ARTAIATRISELNAATDQQKQLTNEANRLSCMVPDLEEKARAASDTLIQAQRN-EAEIAA 649 Query: 761 SVFDDQQ--AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 S+ + + AL ++T+ L + + + AQ + +H + + Sbjct: 650 SINALRATADYANALQAQKTIDDLRSRLEAAQKRFTVAQATWEEQRRAHDEHVARKKELE 709 Query: 819 LALTVT----VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 L V V ++++ Q + I + + + + Q ++ Sbjct: 710 EQLAVAPHFNVATLEEQRILVVQTRKNTVAEITTIESRQATNEKALVALKKIAQSSQRIE 769 Query: 875 QQVEDWGYLNSLI-----GSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK- 927 ++ YL L G++ F + Q + D+++ AN++L+ + GRY L R+ Sbjct: 770 EEFSQISYLADLASGNAVGTQGKISFETYVQSVYFDSVLDAANERLSLMSEGRYTLLRRQ 829 Query: 928 ------ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRID 978 L+++V D + RD +TLSGGESFL SL+LAL SD++ + ++D Sbjct: 830 QARDNRTQSGLDMDVFDAYTGKQ-RDVKTLSGGESFLASLSLALGFSDVIQRQAGGIQLD 888 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 ++F+DEGFG+LD+E L+ AL D L + +G+ISHVE +K+RI +I V+K Sbjct: 889 TMFIDEGFGSLDTEALELALRVFDQLGRDKRLVGIISHVEELKDRIDHRIVVQKDQTGST 948 Query: 1039 SKLE 1042 ++ Sbjct: 949 LTVK 952 >UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICU8_VIBHO Length = 1255 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 192/934 (20%), Positives = 359/934 (38%), Gaps = 65/934 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR +NL S++ ++IDF GLFAITG TGAGK+TLLDAICLALY PR Sbjct: 1 MKILALRGENLASIQHPFEIDFVNSRLGEAGLFAITGKTGAGKSTLLDAICLALYDRMPR 60 Query: 61 LSNVSQSQ-----------------NDLMTRDTAECLAEVEFEVK-GEAYRAFWSQNRAR 102 L ++ +++R AE AEV+F+ G +RA W RAR Sbjct: 61 LQANKKNDAEIGLGDEAARLKANDVRSILSRGKAEGYAEVDFKANDGSCWRAHWHVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 + DG +Q L +G+ + K ++ L L GL Y +F R+++L QG FAAFL Sbjct: 121 GKADGRVQASEQWLENLENGQRFSGKKQEVLGEIERLVGLSYEQFRRAVMLPQGDFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 A ERA LLE +TG EIY ++S +E+ K+ + LE L+ + G+ +L E+ L Sbjct: 181 KASTDERAALLERMTGGEIYSRLSVAAYEKSKAEKNALETLREKLGGICILPEEEKTELR 240 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 L+ + ++ + L EL+ + ++A ++A P+ Sbjct: 241 EKLEAEKASLEGVLAQLDTLKNYRQTLASHAELENALAAAIAQSEEAEKALKEATPRRDE 300 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQS----------TMALRASIRH 332 LS+ + + + ++ +L ++ IE LQ+ + +I Sbjct: 301 LSMVEKVQPAHADFTQLQHTRLSLTQLKNNIESRTAALQTLTGEIITATDALTASQNILS 360 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFR-QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTH 391 A Q E + + + + EH + Q ++ + + + R Q ++ Sbjct: 361 TAQAQWVEAEPKLRRASEMDTEHRAIKQQLDDMQGQLQERDGKINKARAEFEQKRRAHYQ 420 Query: 392 AEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQN 451 E+++ AL + Q+ + + + Q + + +LQ Q Sbjct: 421 LEEQIAALKHELAQFGDF--SGIAEQYQPVLDNLEQYLVANRQYAEAEAEIQKLQHFQQQ 478 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLE--AQRAQLQAGQPCPLC 509 V ++ + + + + +QLAD T ++A+ + Q Q Sbjct: 479 VERDLAGISHQQEILAKERGQLEEQLADADTDTLEKAQKEDYARYEQLQQRHEHFRKLQY 538 Query: 510 GSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 S + ++A S +E+ K+L + T ++ + + Sbjct: 539 ASNEWLNLLEHKARLIQEKNSLTSVIESATKQLSDIEPTFNTRVAQYEEAERALNQSMAV 598 Query: 570 LRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAH- 628 + E + P + P ++ +RQ Q Q + H Sbjct: 599 VSLAEYRSQLEEGQPCPLCGSGHHPYREHNPVVEGVLGSQRQRLQTLQSELRQLESERHY 658 Query: 629 ---------------NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEE-----SWLA 668 QQ + +++++ LL L + ++ SW+ Sbjct: 659 FHQQRQQAQQQMPHWEQQWQELDYHVQRQKALLAPLLEEAGEVTEYLEHDDPNAFGSWVD 718 Query: 669 TRQQEAQS-WQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCL 727 Q+A+ +Q+ ++ L+NR Q+L + Q +L E + QV +Q Sbjct: 719 ESHQKAKENYQEMESLYHTLENRRQRLGYVQRWQQQLMQLGQRENQLQTHA-HQVAQQKT 777 Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ------ 781 + + LQ++ V A +S++ D S + + A + + Q Sbjct: 778 QSDERIKALQERLVAAKESIRSRHNALDDLYGDSSWLNMLQHYGAERYIREMQQRIKHYL 837 Query: 782 -LEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL- 839 L + Q E Q + + L Q H+ + A + E+ Q + L Sbjct: 838 SLREKLQECEKQLTPLVPDMAALEQALKTLQLHQNEAIDAYHILAEKAQLQYKARRAVLD 897 Query: 840 -RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + + ++ L+ ++ + ++ + + Sbjct: 898 VDDLAGYEASLKSALETARSREKECEAVLSSLTE 931 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 191/878 (21%), Positives = 341/878 (38%), Gaps = 30/878 (3%) Query: 192 QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTR 251 +H++ + +L+ +Q Q + + E+Q+ + + Q ++ Sbjct: 382 EHRAIKQQLDDMQGQLQERDGKINKARAEFEQKRRAHYQLEEQIAALKHELAQFGDFSGI 441 Query: 252 QDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA--RNLRPHWERIAEHSAALAHI 309 ++ Q +Q L A + +A+ ++ L Q R+L + + + Sbjct: 442 AEQYQPVLDNLEQYL-VANRQYAEAEAEIQKLQHFQQQVERDLAGISHQQEILAKERGQL 500 Query: 310 RQQIEEVNT----RLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEP 365 +Q+ + +T + Q R + +LQ L+ R Q N Sbjct: 501 EEQLADADTDTLEKAQKEDYARYEQLQQRHEHFRKLQYASNEWLNLLEHKARLIQEKNSL 560 Query: 366 AGWRAQFSQQTSDRE-----HLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 ++Q SD E + Q+++ Q + ++ +E + Sbjct: 561 TSVIESATKQLSDIEPTFNTRVAQYEEAERALNQSMAVVSLAEYRSQLEEGQPCPLCGSG 620 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 P R+H + G + Q++RL LQ ++ + E+ + + +Q+ QQ ++ Sbjct: 621 HHPYREHNPVVEGVLGSQRQRLQTLQSELRQLESERHYFHQQRQQAQQQMPHWEQQWQEL 680 Query: 481 KT-ICEQEARIKTLEAQRAQLQA--GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + Q+A + L + ++ P + +S LEN Sbjct: 681 DYHVQRQKALLAPLLEEAGEVTEYLEHDDPNAFGSWVDESHQKAKENYQEMESLYHTLEN 740 Query: 538 EVKKL------GEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 ++L ++ L + + + + + + +AL ++ A S+ Sbjct: 741 RRQRLGYVQRWQQQLMQLGQRENQLQTHAHQVAQQKTQSDERIKALQERLVAAKESIRSR 800 Query: 592 LQPLDDI---QPWLDAQDEH--ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 LDD+ WL+ + ER +R + QR + + Q+ + + L Sbjct: 801 HNALDDLYGDSSWLNMLQHYGAERYIREMQQRIKHYLSLREKLQECEKQLTPLVPDMAAL 860 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 L L + + LA + Q ++ ++ L L LET ++ Sbjct: 861 EQALKTLQLHQNEAIDAYHILAEKAQLQYKARRAVLDVDDLAGYEASLKSALETARSREK 920 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 + + E A +Q++ +Q K Q F+ A + Sbjct: 921 ECEAVLSSLTEKRAADRAALEAAEAQRKDTDKQHREVVHRWLKWQQTFNLTESALIQLLA 980 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 + + L L+ Q R + + + ++ E + Q + G Sbjct: 981 KDANWVTSERAALKALDDAMQVASTLRNEREGRLRESQEAVDQALTWLTERGADDDEKAT 1040 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 ++ L ++ E S +R+ L+ Q L Q+ + Q E W + L Sbjct: 1041 ALKNALDVQKAEIEE---SVFSVRRTLEASEQAEAQAGELRSQLEKQQQHAEMWMKIADL 1097 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 IGS G+KFR AQ LTL LV AN L L RY LQ S L ++VVD D VR Sbjct: 1098 IGSASGNKFRNLAQSLTLQQLVLEANVHLQELAPRYALQTVPSSPLSLQVVDHDMGDEVR 1157 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 +LSGGESFLVSLALALAL+ L + ++ SLF+DEGFGTLD ++L+ AL LD L A Sbjct: 1158 SVESLSGGESFLVSLALALALASLAADTRQLGSLFIDEGFGTLDPDSLEMALACLDTLQA 1217 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 G+ IGVISHV + ERI Q+ V+ + G G S+++ Sbjct: 1218 DGRQIGVISHVGTLVERIGTQVTVEAL-GGGVSRVQVR 1254 >UniRef50_A3YE93 ATP-dependent dsDNA exonuclease n=1 Tax=Marinomonas sp. MED121 RepID=A3YE93_9GAMM Length = 1261 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 238/922 (25%), Positives = 389/922 (42%), Gaps = 43/922 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI SLR KN+NSLKGEWK+DFT+EPF+ G+FAI G TGAGKT+LLDAICLAL+HETPR Sbjct: 1 MKICSLRFKNINSLKGEWKLDFTKEPFSEAGVFAIVGATGAGKTSLLDAICLALFHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS S N++MTR T+ECLAEVEFEVK YRAFWSQ RAR + DG LQ VEL A Sbjct: 61 L-KVSPSSNEVMTRHTSECLAEVEFEVKSTRYRAFWSQRRAREKSDGKLQPINVELC-LA 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++LA KV +KL L A +TGLD+ RFT+SMLL+QG F+AFLNA+ RAELLEELTGTE Sbjct: 119 SGEVLATKVNEKLALMAHITGLDFSRFTKSMLLAQGGFSAFLNAEANARAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +YG IS +FE+HK R L + Q L + + SL + +E+ L + Sbjct: 179 VYGDISKYIFEEHKLQRQALLLQEQQLDEFERLDEDTLISLKQQEAEFSSKEQLLKVEIE 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 ++ NWL L + + + L E +PQLA+ A + +E+ Sbjct: 239 DAEKRFNWLKLWQNLTTKQTDLTENLAANEKNWESFKPQLASFESGLNANLISQFYEQKK 298 Query: 301 EHSA-ALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + A ++ L+ ++ ++ Q+ + +S E Sbjct: 299 KAFAVEREATEKRHVNQMALLRLNDERSILLQQESSSQAKYALYESESERFKQLEDKVIN 358 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLT-HAEQKLNALAAITLTLTADEVATALAQH 418 +E A ++ SD + + Q+L + LA IT L + L+ Sbjct: 359 PLLSEKHKQSALLTKANSDFNQVIEQSQKLESQIQHDTKQLAGITQELDQLQDVLILSSQ 418 Query: 419 AEQRPLRQHLVALHGQIVPQQKR-LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 + Q + +Q+R L Q Q + ++Q + ++ + +T +L Sbjct: 419 NDVISNELTAWEQQWQYLLEQQRVLYQSQQVGDKLLRDQAKLVSSQQANQASVALETDKL 478 Query: 478 ADVKTICEQEAR-----------IKTLEAQRAQLQA----GQPCPLCGSTSHPAVEAYQ- 521 A ++ + + E+ R LQ Q C + S ++ + Sbjct: 479 AHLQGVFNKIEHDILNLTLGAGVNAWQESDRLALQELSLIQQACKIVQSYDFAQGQSLRL 538 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + +Q L+ E+ + + LD + +++E Q + Q Sbjct: 539 ENQKREHQRHQEQLDQELVNKRQAFQEAKAHLDTLELLAKKEERIVQLEALRAELEENQA 598 Query: 582 QAVTASLNITLQPLDDI-----QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + SL L + + ++ + H+ Q A + ++ Q + Sbjct: 599 CVLCGSLEHPYAHLSSKSHQPGEGHQPIEGHQPGEVHQPGESHQTLAQYEAQSAKVHQLE 658 Query: 637 QQ---IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 + + + Q + +T L ++ + + + + + Q Sbjct: 659 AEGRDLSSQSQTINVLITQLEANLLEQRHIINQIEQEAIDLNLPNNQTWPAISDSTAWQA 718 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + + + +E + T ++ V +Q L QQ AQSL + Sbjct: 719 IHAESQRIQTQNEHTRTQLTPLMHELEAVSQQVQMAQQSLDKLLQQGDYEAQSLMLLNTR 778 Query: 754 FDTALQ-----ASVFDDQQAFLA-----ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 + ++ ++F D+Q L L L Q + L+++ + + Sbjct: 779 IEEFVKEQRDNEALFKDKQTHLLGQIAPYLEVSYEFQDLHQAFEYLQSRLSRWRD-AQTR 837 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ---DADNR 860 L Q + ++ + Q++Q + L + I+ QL D Sbjct: 838 QVALKQQEGNQKAKLDVNDAQLTQLKQTHHELSLVLETYQKALDLIQDQLTSHLGDQSLE 897 Query: 861 QQQQTLMQQIAQMTQQVEDWGY 882 Q++ + Q + Q V+ Sbjct: 898 QKRAGIKQALTLAEQDVKKVQQ 919 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 225/917 (24%), Positives = 381/917 (41%), Gaps = 51/917 (5%) Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E + Q+ V S + + L +A+ EQ Q L + +Q T + + Sbjct: 347 ERFKQLEDKVINPLLSEKHKQSALLTKANSDFNQVIEQSQKLESQIQHDTKQLAGITQEL 406 Query: 240 QQEQQSL----------NWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 Q Q L N LT ++ Q +Q+ L Q+ +K A L +Q A Sbjct: 407 DQLQDVLILSSQNDVISNELTAWEQQWQYLLEQQRVLYQSQQVGDKLLRDQAKLVSSQQA 466 Query: 290 RN--LRPHWERIAEHSAALAHIRQQIEEVN--------TRLQSTMALRASIRHHAAKQSA 339 + +++A I I + S+ A K Sbjct: 467 NQASVALETDKLAHLQGVFNKIEHDILNLTLGAGVNAWQESDRLALQELSLIQQACKIVQ 526 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 Q + ++ + Q + + + L E+++ L Sbjct: 527 SYDFAQGQSLRLENQKREHQRHQEQLDQELVNKRQAFQEAKAHLDTLELLAKKEERIVQL 586 Query: 400 AAITLTLTADEV----ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 A+ L ++ + +A H I Q + Sbjct: 587 EALRAELEENQACVLCGSLEHPYAHLSSKSHQPGEGHQPIEGHQPGEVHQPGESHQTLAQ 646 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 ++A ++++ ++ + Q + + Q + + L + Sbjct: 647 YEAQSAKVHQLEAEGRDLSSQSQTINVLITQLEANLLEQRHIINQIEQEAIDLNLPNNQT 706 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 + + ++ + + + L +L+A+++Q+Q + L Q Sbjct: 707 WPAISDSTAWQAIHAESQRIQTQNEHTRTQLTPLMHELEAVSQQVQMAQQSLDKLLQQGD 766 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 Q + + ++ D + + H L ++ E+ + +Q Sbjct: 767 YEAQSLMLLNTRIEEFVKEQRDNEALFKDKQTH--LLGQIAPYLEVSYEFQDLHQAFEYL 824 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS-------WQQRQNELTALQ 688 Q ++ + + + Q+ + + A Q Q+ + Q L +Q Sbjct: 825 QSRLSRWRDAQTRQVALKQQEGNQKAKLDVNDAQLTQLKQTHHELSLVLETYQKALDLIQ 884 Query: 689 NRI------QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVL 742 +++ Q L + Q+ L + V + + + +L +++ +L Sbjct: 885 DQLTSHLGDQSLEQKRAGIKQALTLAEQDVKKVQQKGLDISAEIQSLEGSLLAQEERLLL 944 Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 + + + L S FDD+ + A + + + +L K+ LE QA+ + Q Sbjct: 945 LREDTISVEKIWQQKLIDSGFDDEADWQAQHLADSEMDRLAYDKKQLEEALAQAKDRLLQ 1004 Query: 803 TAETLAQHQQHRPDDGL------------ALTVTVEQIQQELAQTHQKLRENTTSQGEIR 850 + + +HQ P AL +E ++ E+ K + G+++ Sbjct: 1005 VKDEIEKHQASFPASSEFIPAKVFELTEAALVHQIETLETEIKALSVKHTQEHQRYGQVK 1064 Query: 851 QQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHL 910 QLK D + + Q ++++A+ ++ L LIG+ +G KFRKFAQ LTLDNL+HL Sbjct: 1065 MQLKTHEDTQTKYQLGLEKLAKARSEMALMTQLQQLIGAADGAKFRKFAQSLTLDNLLHL 1124 Query: 911 ANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 AN++L LH RY LQRK + LE+ V+DTWQAD+ RDTRTLSGGESFLVSLALALALSDL Sbjct: 1125 ANKRLALLHDRYQLQRKFGDKLELVVLDTWQADSERDTRTLSGGESFLVSLALALALSDL 1184 Query: 971 VSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 VSHKT IDSLFLDEGFGTLDS+TLD ALDAL+ LNA+GKTIG+ISHVEA+KER+ VQ+K+ Sbjct: 1185 VSHKTSIDSLFLDEGFGTLDSQTLDIALDALELLNAAGKTIGIISHVEALKERMSVQVKL 1244 Query: 1031 KKINGLGYSKLESTFAV 1047 K+ GLG S+L+ +AV Sbjct: 1245 TKLPGLGISQLDKMYAV 1261 >UniRef50_B2HL37 Chromosome partition ATPase protein n=1 Tax=Mycobacterium marinum M RepID=B2HL37_MYCMM Length = 1002 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 210/1053 (19%), Positives = 395/1053 (37%), Gaps = 105/1053 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR+K L S + E +I+F+ AI G TGAGK+++L+AI ALY+ T Sbjct: 1 MRPLRLRIKGLRSFRSEVEINFSELALV-----AIVGDTGAGKSSILEAITYALYNAT-- 53 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + L++ +++F G+ YR S +R + P G+L L + Sbjct: 54 -TWEQRGVKQLISDGATTMTVQLDFACDGQRYRITRSTSRGQYPPPGHL------LEYLS 106 Query: 121 DGKILA-DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D I D + L GLD+ FT +++L QG F L A P +R E+L+ + Sbjct: 107 DPTIRPLDGEEAIKREIFRLVGLDWKGFTSAVILPQGSFQTLLQAPPADRTEILKGIFRL 166 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 G + R LEKLQA + A+ +++ Sbjct: 167 HELGLVREQAQTLAGEYRGSLEKLQADRVQLLPDP-------KAAANEAAGRKRKAEKFA 219 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + ++ +T Q + + L+ E+A A + LRP E + Sbjct: 220 NKLREFRTQVTEQQKAANMQTEAAARLRDTATLVEQANTH-----PAAALQALRPVLEEL 274 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + + L ++++ + R + + + A + + L+ + Sbjct: 275 DKRAVGLDRDERKLQRSDERASAAIERAEAAGESEATLARAQTVLSRLLSDLPELAAEKT 334 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + E + Q SD E L+ + E+ L + EV A Sbjct: 335 RLEEERQALELEAKQLVSDEESLQLLRAAALEKERALKTIE--------KEVLAASNALQ 386 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 + + L + K LA L+V Q + + AA ++ R + LA Sbjct: 387 KASERLEEYRRLALEERTAAKTLAALEVEQQGAEKNLAKARAAEHQARSEAETAAAALAH 446 Query: 480 VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEV 539 ++ L G CP+CG T + +A + + Sbjct: 447 IQRK-------HAAAHAAQGLGPGDGCPICGQTIPAGFKPPRA----QRERAASKTNEDA 495 Query: 540 KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW-QAVTASLNITLQP---- 594 +++ E +R +L+ +QL ++A++ Q T+ + + A+L Sbjct: 496 RRVQTEARDVRVKLEERCRQLGESIDQARTTSQTASRATKNAFRGLRAALGDADADPDVS 555 Query: 595 ----LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQ--------IIQYQQQIEQR 642 L+++ L Q+ + R ++ L + A Q Q ++ + Sbjct: 556 KAALLEELTTRLHKQEAAAAKARGKAEAARLAFERRAAALQPRRDALSTRRQALERSNVK 615 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQ--QEAQSWQQRQNELTALQNRIQQLTPILET 700 L LTLP+ + + + A+ ++R +E++ ++ +++ Sbjct: 616 HSKQAEALAADRLTLPERFRPAANASVDRMGSVAERLRKRLDEVSGIRLERERIQRRFAE 675 Query: 701 L-PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L + + L + R++ + L LHS+ + A S ++ F ++ Sbjct: 676 LRSERNALAERRQEDFESPRRRLEQAALMLHSRLSDAAEIAHTEAPSFPESDIDFGAFVE 735 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 A ++ L + A + +T+ Sbjct: 736 AVA--------------ALEASAARVLDGLHGRASDADQAAERARQTIGTLLAK------ 775 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 A T++ + ++L + R+Q+ + ++ L + I Sbjct: 776 ADAPTIDALDEQLIAARATFTRAKDDEVYAREQIPKVVALEEKLGPLREAI--------- 826 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVEVVD 938 G L++L +F F L+ +A++ + G RY A + ++D Sbjct: 827 -GTLDTLASMLTDGRFIGFVVARRQRALLGVASEIFGSMTGMRYGF------AEDFRIID 879 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSH-KTRIDSLFLDEGFGTLDSETLDTA 997 + R RTLSGGE+FL SL+LAL L +L + R+++LFLDEGFG+LD++ L A Sbjct: 880 R-ISGQPRGARTLSGGETFLASLSLALGLVELAARSGGRLEALFLDEGFGSLDADALQEA 938 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 L L+ A+G+ + VISH+ A+ E I ++V Sbjct: 939 LGELERRAATGRLVAVISHIRAVAESIESVLRV 971 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteri... 625 e-177 UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50... 477 e-132 UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transp... 468 e-130 UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Gla... 453 e-125 UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQ... 445 e-123 UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx1... 440 e-121 UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepI... 438 e-121 UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepI... 436 e-120 UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bactero... 434 e-120 UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobac... 433 e-119 UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilon... 432 e-119 UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 T... 423 e-116 UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella am... 417 e-114 UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43F... 415 e-114 UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enteroba... 409 e-112 UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinoge... 408 e-112 UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulf... 407 e-111 UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I... 403 e-110 UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumar... 402 e-110 UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epu... 401 e-110 UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovo... 400 e-109 UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungat... 400 e-109 UniRef50_Q73RB9 Nuclease SbcCD, C subunit, putative n=1 Tax=Trep... 400 e-109 UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum ... 398 e-109 UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkal... 397 e-108 UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema palli... 393 e-107 UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacter... 393 e-107 UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testo... 390 e-106 UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID... 387 e-105 UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepI... 386 e-105 UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=C... 386 e-105 UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=... 385 e-105 UniRef50_UPI000196C4FF hypothetical protein CATMIT_02378 n=1 Tax... 384 e-104 UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE 382 e-104 UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0H... 381 e-104 UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 381 e-104 UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminoc... 380 e-103 UniRef50_C7N5A9 ATPase involved in DNA repair n=1 Tax=Slackia he... 380 e-103 UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostri... 378 e-103 UniRef50_D0L9F7 DNA repair exonuclease, SbcC n=1 Tax=Gordonia br... 376 e-102 UniRef50_C8PR35 SMC domain protein n=1 Tax=Treponema vincentii A... 374 e-102 UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychrofl... 374 e-102 UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22... 373 e-101 UniRef50_A3TKY1 Putative exonuclease n=1 Tax=Janibacter sp. HTCC... 373 e-101 UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=... 371 e-101 UniRef50_D2LF16 Exonuclease protein n=1 Tax=Rhodomicrobium vanni... 371 e-101 UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteoba... 370 e-100 UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostri... 370 e-100 UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacte... 370 e-100 UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Provide... 368 e-100 UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostri... 368 e-100 UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus ... 368 e-100 UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea l... 367 e-99 UniRef50_Q1WSF5 Exonuclease n=2 Tax=Lactobacillus salivarius Rep... 366 2e-99 UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteoba... 366 3e-99 UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 ... 365 4e-99 UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytoferm... 365 5e-99 UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipe... 364 1e-98 UniRef50_B9J003 Exonuclease n=78 Tax=Bacillus RepID=B9J003_BACCQ 363 2e-98 UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus V... 361 1e-97 UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ... 360 1e-97 UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillu... 360 2e-97 UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostri... 360 2e-97 UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bactero... 360 2e-97 UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=... 360 2e-97 UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostri... 359 3e-97 UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohomi... 359 3e-97 UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 ... 359 4e-97 UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinom... 358 7e-97 UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME 356 2e-96 UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. ... 356 3e-96 UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ ... 356 4e-96 UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=S... 355 8e-96 UniRef50_B0A864 Putative uncharacterized protein n=1 Tax=Clostri... 354 1e-95 UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0W... 352 4e-95 UniRef50_C6XKD1 SMC domain protein n=1 Tax=Hirschia baltica ATCC... 351 7e-95 UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthro... 350 2e-94 UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xen... 349 3e-94 UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH 349 3e-94 UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotro... 348 5e-94 UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 2... 348 6e-94 UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC ... 347 2e-93 UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobact... 346 2e-93 UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri ... 346 3e-93 UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum... 345 5e-93 UniRef50_B9EBU9 Putative uncharacterized protein n=1 Tax=Macroco... 345 5e-93 UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothe... 344 7e-93 UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus ... 344 1e-92 UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibact... 343 2e-92 UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29... 343 2e-92 UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus... 343 3e-92 UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacteriu... 341 7e-92 UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga... 341 7e-92 UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bactero... 340 2e-91 UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteri... 339 3e-91 UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolytic... 339 3e-91 UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus ... 338 5e-91 UniRef50_Q0S485 ATP-dependent dsDNA exonuclease SbcC n=4 Tax=Rho... 338 9e-91 UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae Rep... 337 1e-90 UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydroge... 337 1e-90 UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. A... 334 1e-89 UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium ace... 334 1e-89 UniRef50_UPI0001C34C0F ATPase involved in DNA repair n=1 Tax=Clo... 334 1e-89 UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clos... 334 1e-89 UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis ... 333 3e-89 UniRef50_A5ZTK9 Putative uncharacterized protein n=1 Tax=Ruminoc... 332 4e-89 UniRef50_B9DP77 Putative ATPase involved in DNA repair n=1 Tax=S... 332 4e-89 UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales... 331 9e-89 UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 331 9e-89 UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI0... 331 1e-88 UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI 331 1e-88 UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibir... 331 1e-88 UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24... 330 1e-88 UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroid... 330 2e-88 UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina ba... 328 6e-88 UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroid... 327 1e-87 UniRef50_C7TAC3 DNA repair ATPase n=8 Tax=Lactobacillus RepID=C7... 326 3e-87 UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease ... 326 4e-87 UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus ... 326 4e-87 UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostri... 325 6e-87 UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E... 325 6e-87 UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortifer... 324 1e-86 UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesentero... 324 1e-86 UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sp... 324 1e-86 UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuoke... 323 2e-86 UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococ... 321 7e-86 UniRef50_O67124 Probable DNA double-strand break repair rad50 AT... 321 8e-86 UniRef50_D2SG48 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 321 1e-85 UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella... 321 1e-85 UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=... 321 1e-85 UniRef50_Q8EP67 Exonuclease n=1 Tax=Oceanobacillus iheyensis Rep... 320 2e-85 UniRef50_C9XND8 Exonuclease subunit C n=7 Tax=Clostridium diffic... 319 4e-85 UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. ... 318 9e-85 UniRef50_C7RGF7 SMC domain protein n=2 Tax=Anaerococcus RepID=C7... 318 1e-84 UniRef50_A1ZW09 ATPase involved in DNA repair, putative n=1 Tax=... 317 1e-84 UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycet... 317 2e-84 UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. ... 316 2e-84 UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobac... 316 3e-84 UniRef50_A4ENU5 Exonuclease SbcC, putative n=1 Tax=Roseobacter s... 316 3e-84 UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax... 314 1e-83 UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48F... 314 1e-83 UniRef50_B5HAZ2 SMC domain-containing protein n=1 Tax=Streptomyc... 314 1e-83 UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria R... 313 2e-83 UniRef50_A5VKB7 SMC domain protein n=8 Tax=Lactobacillus RepID=A... 312 4e-83 UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 311 9e-83 UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lac... 310 2e-82 UniRef50_C6VSY3 SMC domain protein n=1 Tax=Dyadobacter fermentan... 310 2e-82 UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacterac... 310 2e-82 UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6L... 308 8e-82 UniRef50_B2GF12 Exonuclease SbcC n=3 Tax=Lactobacillus fermentum... 308 1e-81 UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 T... 307 1e-81 UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 700... 306 2e-81 UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostri... 306 2e-81 UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonada... 306 2e-81 UniRef50_C5D6P9 SMC domain protein n=3 Tax=Geobacillus RepID=C5D... 306 3e-81 UniRef50_Q03P50 DNA repair ATPase n=1 Tax=Lactobacillus brevis A... 306 4e-81 UniRef50_C8XKJ6 Exonuclease SbcC n=1 Tax=Nakamurella multipartit... 305 5e-81 UniRef50_C0EV37 Putative uncharacterized protein n=1 Tax=Eubacte... 305 5e-81 UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8... 304 9e-81 UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi D... 304 2e-80 UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 1... 303 2e-80 UniRef50_C2BSE3 ATP-dependent dsDNA exonuclease SbcC n=1 Tax=Mob... 303 3e-80 UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybact... 303 4e-80 UniRef50_B0RFM2 Putative nuclease n=2 Tax=Clavibacter michiganen... 301 7e-80 UniRef50_B7GM49 ATPase involved in DNA repair, SbcC n=1 Tax=Anox... 301 7e-80 UniRef50_D0WRP2 Putative nuclease sbcCD subunit C n=1 Tax=Actino... 301 1e-79 UniRef50_Q826W9 Putative ATP-dependent dsDNA exonuclease n=6 Tax... 300 2e-79 UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynne... 300 2e-79 UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of ... 299 3e-79 UniRef50_A7Z370 YirY n=2 Tax=Bacillus subtilis group RepID=A7Z37... 299 3e-79 UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=... 298 1e-78 UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetob... 297 2e-78 UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9R... 296 4e-78 UniRef50_C2KSA6 Exonuclease sbcc n=2 Tax=Mobiluncus mulieris Rep... 296 4e-78 UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transp... 295 5e-78 UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis ... 294 2e-77 UniRef50_B6FJZ8 Putative uncharacterized protein n=1 Tax=Clostri... 293 2e-77 UniRef50_B5Y7X7 Probable DNA double-strand break repair Rad50 AT... 292 4e-77 UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=... 292 5e-77 UniRef50_Q0SWG0 Exonuclease SbcC n=9 Tax=Clostridium perfringens... 292 6e-77 UniRef50_A7HCA0 DNA repair exonuclease, SbcC n=1 Tax=Anaeromyxob... 291 1e-76 UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aest... 288 6e-76 UniRef50_A3HX95 Probable exonuclease n=1 Tax=Algoriphagus sp. PR... 288 8e-76 UniRef50_C9BXS9 Exonuclease SbcC n=12 Tax=Enterococcus faecium R... 286 3e-75 UniRef50_Q58718 DNA double-strand break repair rad50 ATPase n=1 ... 286 3e-75 UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB... 286 3e-75 UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=... 286 4e-75 UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 285 6e-75 UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alk... 285 7e-75 UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis p... 284 9e-75 UniRef50_UPI00016C3AE4 exonuclease SbcC n=1 Tax=Gemmata obscurig... 284 1e-74 UniRef50_A6UUX2 SMC domain protein n=1 Tax=Methanococcus aeolicu... 283 2e-74 UniRef50_C0W8J1 Exonuclease n=1 Tax=Actinomyces urogenitalis DSM... 283 3e-74 UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella cop... 282 3e-74 UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_... 282 5e-74 UniRef50_D2NSE4 ATPase involved in DNA repair n=2 Tax=Rothia muc... 281 8e-74 UniRef50_C9L5R9 Putative exonuclease SbcC n=1 Tax=Blautia hansen... 281 8e-74 UniRef50_A9WFV4 SMC domain protein n=3 Tax=Chloroflexus RepID=A9... 281 1e-73 UniRef50_C7P7E8 SMC domain protein n=3 Tax=Methanocaldococcus Re... 280 2e-73 UniRef50_C5NXT7 Nuclease sbcCD subunit C n=1 Tax=Gemella haemoly... 277 2e-72 UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales Rep... 276 3e-72 UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 276 5e-72 UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium... 275 7e-72 UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZ... 274 1e-71 UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=... 271 1e-70 UniRef50_D0MI39 SMC domain protein n=1 Tax=Rhodothermus marinus ... 270 3e-70 UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus lu... 268 8e-70 UniRef50_C4FEI1 Putative uncharacterized protein n=1 Tax=Bifidob... 267 1e-69 UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunic... 267 2e-69 UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum R... 267 2e-69 UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivi... 267 2e-69 UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus as... 266 4e-69 UniRef50_B5VUC1 SMC domain protein n=4 Tax=Cyanobacteria RepID=B... 266 5e-69 UniRef50_A5Z5M9 Putative uncharacterized protein n=1 Tax=Eubacte... 266 5e-69 UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum ... 263 2e-68 UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG... 263 3e-68 UniRef50_D1NTD8 Exonuclease SbcC n=1 Tax=Bifidobacterium gallicu... 262 5e-68 UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 262 6e-68 UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella deni... 262 8e-68 UniRef50_B5HB14 Exonuclease SbcC n=1 Tax=Streptomyces pristinaes... 260 2e-67 UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1... 259 5e-67 UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlan... 258 1e-66 UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancou... 257 1e-66 UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms Re... 255 6e-66 UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccu... 255 8e-66 UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Ps... 254 1e-65 UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Provide... 253 3e-65 UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis... 252 7e-65 UniRef50_C5CAA1 Exonuclease SbcC n=2 Tax=Micrococcus luteus NCTC... 251 8e-65 UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech7... 251 9e-65 UniRef50_B2HL37 Chromosome partition ATPase protein n=1 Tax=Myco... 251 9e-65 UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria Rep... 251 1e-64 UniRef50_Q10XV9 Exonuclease SbcC n=2 Tax=Oscillatoriales RepID=Q... 250 2e-64 UniRef50_A5URR1 SMC domain protein n=2 Tax=Roseiflexus RepID=A5U... 249 3e-64 UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE 247 1e-63 UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales Re... 246 3e-63 UniRef50_B6QZR1 Exonuclease SbcC n=1 Tax=Pseudovibrio sp. JE062 ... 245 6e-63 UniRef50_A6UPY6 SMC domain protein n=1 Tax=Methanococcus vanniel... 245 7e-63 UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP ... 244 1e-62 UniRef50_A8SR38 Putative uncharacterized protein n=1 Tax=Coproco... 244 1e-62 UniRef50_P62134 DNA double-strand break repair rad50 ATPase n=4 ... 243 2e-62 UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfo... 242 5e-62 UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter ... 242 8e-62 UniRef50_C9M6Q3 Putative ATP-dependent dsDNA exonuclease n=1 Tax... 242 8e-62 UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp.... 242 8e-62 UniRef50_C1SG11 Chromosome segregation protein SMC n=1 Tax=Denit... 241 1e-61 UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomo... 241 1e-61 UniRef50_B4WQR3 RecF/RecN/SMC N terminal domain, putative n=1 Ta... 241 1e-61 UniRef50_Q6IEE1 SbcC exonuclease n=7 Tax=Bacteria RepID=Q6IEE1_B... 240 1e-61 UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella ch... 240 2e-61 Sequences not found previously or not previously below threshold: >UniRef50_P13458 Nuclease sbcCD subunit C n=111 Tax=Enterobacteriaceae RepID=SBCC_ECOLI Length = 1048 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 1048/1048 (100%), Positives = 1048/1048 (100%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA Sbjct: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE Sbjct: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ Sbjct: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA Sbjct: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ Sbjct: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE Sbjct: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV Sbjct: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK Sbjct: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP Sbjct: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE Sbjct: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR Sbjct: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT Sbjct: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR Sbjct: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ Sbjct: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS Sbjct: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM Sbjct: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 KERIPVQIKVKKINGLGYSKLESTFAVK Sbjct: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048 >UniRef50_A1TY50 SMC domain protein n=8 Tax=Bacteria RepID=A1TY50_MARAV Length = 1091 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 310/1088 (28%), Positives = 503/1088 (46%), Gaps = 52/1088 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +R KNLNSL GEW+ID FAS+G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MRILQVRFKNLNSLVGEWEIDLMHPAFASDGIFAITGPTGAGKTTILDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ V++S N++M+R T C AEV FE + YR WSQ+RAR +PDG LQ P+ E+A Sbjct: 61 LNKVTKSGNEIMSRQTGACFAEVTFETQSGRYRCHWSQHRARKKPDGELQAPKHEIANAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I K++ + + TG+D+ RFTRSMLL+QG FAAFL A P +RA +LE++TGTE Sbjct: 121 SGEIFESKMRGVADQIESATGMDFDRFTRSMLLAQGGFAAFLQAAPDDRAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS V E+ + R +L LQA+ +G+ +L PEQ Q + +L EE L Sbjct: 181 IYSQISIRVHERQREEREKLNLLQAETAGIVILEPEQEQEIAQTLDTRQKEETDLAAKSA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++ WL+ D L++E + + +P L+ A A +L + + Sbjct: 241 EAGKAIAWLSIIDGLKKEIVNLADEESKLHVDIRAFKPDRERLNRALSASSLDGVYATLM 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A R+ ++ L + + + + ++ L + R Sbjct: 301 ATRKQQADDREALKTEEEALPGLESSAKEQAETMSTAEQQTARAKEELKAAAPILQKVRS 360 Query: 361 WNNEPAGWRAQF-----------SQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 + + A ++ +D + + Q++ A+Q L + D Sbjct: 361 LDQKLADQEKAVTAGDEACKKDSAKIDADTQTRLKEQEKRIKAQQALELVEGYLKEHARD 420 Query: 410 E-------------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 E + AL + ++Q L + QK+ + ++ Sbjct: 421 EWLIGGLAGVEEQLRGLLFRQSEALQKESDQETAENALKQATTSLDDCQKQSGIRKQELE 480 Query: 451 NVTQEQTQRNAALNEMR--QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL 508 + +++ Q L+++ + +E + + +I LE RA+L+ G+PCPL Sbjct: 481 DASKQLQQGKDVLSQLLGGRLLREYRTEKETLLREMAFLTKIAELEDHRAKLEDGKPCPL 540 Query: 509 CGSTSHPAVE---------AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 CG+T HP E + ++ E +KKL E + R L A K Sbjct: 541 CGATEHPFAEGNVPASDETEQKIEALTKLINKAENQEAAIKKLEEAESLARKNLTAAEKL 600 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQL-RLLSQR 618 N+ ++ + + + + A + L ++ E + LL Sbjct: 601 ESAAANDKKAAERTLAEVKGSLEKLRADFAERRHAVSSRLLPLGIENIPETDISSLLETL 660 Query: 619 HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ 678 + A ++ ++Q+ + E+ L T + E + Sbjct: 661 KARLKEWQAQVKKKADIEKQVADLDSEIKRLDAVIETQSTALAEKRERLETLKTEFAAGN 720 Query: 679 QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 + L + L ++ E + Q+ ++ + ++L++ Sbjct: 721 DERKALYD----DRNPDEEERGLNKAVFDAEGAERQARDQHNQLQQRWHTAKAHVESLRK 776 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 + L + + F AL F D++ FL A + + +L L+ ++ + Sbjct: 777 RIDQREPELGRMETDFSEALTPVGFSDEEQFLGARLTSERRGELAVKANELDERQTDMKA 836 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 LA + D +E+++ + + + LR+ ++ +L ++ Sbjct: 837 RQKDRETRLATEMARKVTDKS-----LEELEPQFKEYEESLRDLRDIIAGLKHKLSENTA 891 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 +++ + I ++ W L+ LIGS +G K+R FAQGLT + ++ AN+QL ++ Sbjct: 892 AKERIKEKQAAIEAQGKECRRWENLHELIGSADGKKYRNFAQGLTFEMMIGHANRQLQKM 951 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRID 978 RYLL R ++ LE+ VVD +QA +R T+ LSGGESF+VSL+LAL LS + S R+D Sbjct: 952 TDRYLLVRHDAQPLELNVVDNYQAGEIRPTKNLSGGESFIVSLSLALGLSHMASKNVRVD 1011 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 SLFLDEGFGTLD E LDTAL+ L L GK IGVISHV A+KERI QI+V G Sbjct: 1012 SLFLDEGFGTLDDEALDTALETLSGLQQDGKLIGVISHVPALKERISTQIQVTP-QTGGR 1070 Query: 1039 SKLESTFA 1046 S++ Sbjct: 1071 SQISGPGC 1078 >UniRef50_Q82UT3 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Nitrosomonas europaea RepID=Q82UT3_NITEU Length = 1087 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 329/1080 (30%), Positives = 494/1080 (45%), Gaps = 50/1080 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +RLKNLNSL GEW+IDFT F S+G+F+ITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MQILQVRLKNLNSLVGEWEIDFTDPAFVSDGIFSITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS+S+N++M+R T EC AEV F + +R WSQ+RA +PDG LQ PR ELA Sbjct: 61 LGKVSKSENEIMSRQTGECFAEVTFAAQSGCFRCHWSQHRAHKKPDGELQNPRHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++ + +TG+D+ RFTRSMLL+QG+FAAFL A P ERA +LE++TGTE Sbjct: 121 SGKILETRLTEVGRQIEKITGMDFARFTRSMLLAQGEFAAFLQAAPDERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E SAR EL++L A +G+ LT Q L ++ L Sbjct: 181 IYSRISIRVHETRVSARRELDRLSAGLNGIQPLTRADEQQFHTDLAQKIQQDAGLNEQIA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 E+Q L WL L+ E Q L+ +E P ++ L A A L + R+ Sbjct: 241 HERQILVWLENIARLESELHLIAGQQQAWLSRKEALTPDISKLDSASRALELLGEYSRLT 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 R + L + + +Q+ + + R+ Sbjct: 301 SIRNEQETDRNNLAICAASLAGLEQAVKQAEQSLKSLNEQCDRQRAKQRETIPLLRKVRE 360 Query: 361 WNNEPAGWRA----QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA-------- 408 + + + T+ ++ L + Q E +L L L Sbjct: 361 LDIQIREKESPISTASKGITAQKKTLAALRNQYQQNEIQLAGLQTTLAGLLQQLHVIQPD 420 Query: 409 ----------------DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA--------- 443 L ++ RQ + L GQ + + Sbjct: 421 GAQMDFAHNQNLLNRKQAEYRQLLENRSLADWRQEIAVLSGQKTLATRAIEAMQSLAASK 480 Query: 444 ----QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 +L+ ++ +TQ L + ++++ ++T +I LE R Q Sbjct: 481 QISAELEKHTCSLLAGKTQLAKQLGAEEEMLGALEREISLLETQALLLKKISHLEEARQQ 540 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+ +PCPLCG+ HP P N + L +K + +TL+ + + Sbjct: 541 LKDDEPCPLCGALQHPYAAGN-TPRPDDNITALNQARTMLKTRIDTISTLKIRQAETNRD 599 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 +++ Q + + QA Q SL L E + +L +++ Sbjct: 600 IEQTACRQQEIHRQIQADETLLQQCAVSLFPGLPSAAMFPELPRLLQETDDKLARMTRIL 659 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 + + + + + +Q + + Q + E+ L RQ++ QQ Sbjct: 660 QTAEILENEISVQRESLDKTRELEQKIGILRVQHQHQSTQIRQHEAELQLRQEQLDQLQQ 719 Query: 680 RQNELTALQNRI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 L + ++ +Q ++L + E + +Q L ++ + L Sbjct: 720 ELGNLRTTRLQLFADKQPDQEEQSLTTAIEAAQKSADNARQQLETEIQQYNRLKNRAEDL 779 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQA 796 + A L+K Q F L S F D+ F AA + E+ +L Q Q L +++ Sbjct: 780 VKTITTRAVQLEKLQETFAARLTQSGFADEAGFTAACLPEEERRRLAQRAQQLADEKTML 839 Query: 797 QTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQD 856 T L Q D Q LAQ + + G +RQ+L + Sbjct: 840 DTRQKDKTIALQAEQLKSMTDQPRDFHD-----QVLAQLITRQQVLQQEIGGLRQKLADN 894 Query: 857 ADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLT 916 +++Q+QQ +Q I ++ W L+ LIGS +G K+R FAQGLT + ++ AN+QL Sbjct: 895 ENSKQKQQEQLQVIEAQKRECARWDLLHGLIGSADGKKYRNFAQGLTFEVMIRHANRQLQ 954 Query: 917 RLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTR 976 +L RYLL R LE+ V+D +QA +R T+ LSGGESFL+SL+LAL LS +VS R Sbjct: 955 KLSDRYLLIRDPVRPLELNVIDNYQAGEIRSTKNLSGGESFLISLSLALGLSRMVSRNIR 1014 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 +DSLFLDEGFGTLD E LDTAL+ L L GK IG+ISHV ++ERI +I+V +G Sbjct: 1015 VDSLFLDEGFGTLDEEALDTALETLAHLQQEGKLIGIISHVTVLQERISTRIQVIPRSGG 1074 >UniRef50_UPI0000E0E5B9 ATPase involved in DNA repair n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E5B9 Length = 1191 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 336/1189 (28%), Positives = 533/1189 (44%), Gaps = 144/1189 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L+NLNS++ +WKIDFT + FA NGLFAITGPTGAGKTT+LDAICLALYH TPR Sbjct: 1 MKILSVLLENLNSIEQKWKIDFTADEFADNGLFAITGPTGAGKTTILDAICLALYHTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +Q+ +M R+ C AEVEF V + Y A WS +RAR + DG +Q + L Sbjct: 61 TGSGTQNGEMVMNRNAGFCSAEVEFSVNDKVYLATWSVSRARKKTDGKIQPAKASLTNLT 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D +A ++ DKL+ LT L++ +FT+SMLLSQG FAAFL+AK ER++LL+++TGTE Sbjct: 121 DNIEMATQIGDKLKQVIHLTKLEFSQFTKSMLLSQGAFAAFLDAKDNERSDLLQQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS FE+ K + L++L + S +L+ ++ S+ S L + QL T Sbjct: 181 IYTEISKRAFEEAKQLESLLKQLHMKHSAQPVLSDDEEASIAESANELLIQTTQLQTQIN 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +WLT+ D L Q + + A + A++ E+ + LA L L A++ P + ++ Sbjct: 241 NLVEHRDWLTQLDVLTQHVTGAKAAHEHAVSALEQEKTNLAMLELGLLAQSFAPLYAKMQ 300 Query: 301 EHSAALAHIR----------------------------------------------QQIE 314 + ++ ++ +QI Sbjct: 301 DLEIRVSTLQDELSQLKTQLPDLAQTLDDANTALKTAQDALNTQTKAHNALQQLINEQIT 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL-----------------NTWLQEHDR 357 +++ + T + K + + Q + +L++H Sbjct: 361 PLDSEINQTTKQLNITQQDIDKHTKLRDEAQGKITLTTPLIDQAQTQLTQAQEYLEQHQA 420 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 +GW + Q + Q ++ + + L +T + Sbjct: 421 DAHLVQYLSGWHSDVKQIQQAYATVHSVQARMLAQQSNTDTLDDVTAQIAIITTELNTHA 480 Query: 418 HAEQRPLRQ------------------HLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 +A+ ++Q + ++ ++ + Q I +TQ Sbjct: 481 NAQLTEVKQYMAAGDDRLRDAATQQLQARQIIEATLLGFAQQYNETQGQISTLTQSTDTL 540 Query: 460 NAALNEMRQRYKEKTQQLADVKTICE----QEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 A L TQ+ + + E + L QL + CPLC + Sbjct: 541 TADLAAQNAALITLTQERDRDQALYENTKLAQGLQAQLAELSQQLHHKETCPLCAGSEFG 600 Query: 516 AVEAYQALEPGVNQ-----SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 E+Y A + +N ++ ++ ++ + + + I L + L Sbjct: 601 DYESYHAHQTQLNDDGAFSQKIAEYLHQFEQSEQAVTKKQQAIAKIEAHLASALAQIDQL 660 Query: 571 RQDEQALTQQWQAVTASLNITLQPLDDIQ-----PWLDAQDEHERQLRLLSQRHELQGQI 625 + ++W T L++TL D + + QL L+ R L ++ Sbjct: 661 QLTLTTNQERWDTATKQLSVTLSITDHEAIMRYLQECEDFRDGITQLSTLNSRAALFNEL 720 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT 685 + Q+ Q + ++ SWLA +Q +A +WQ +++ T Sbjct: 721 TTAQSTWNDAKAQLSQAIVIAGYAAAPEIDIEYEDSLFLSWLAQKQADATAWQDQKSAFT 780 Query: 686 ALQNRIQQL--------------TPILETLPQSDELPHCEETVVLE-------------- 717 + + +L LE+L + + Sbjct: 781 TQEKALTRLHADIQIQTNQKVTSDEALESLYDQQTQLNITLQSAKQKRFALFADKIPHTE 840 Query: 718 --------------------NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 + H Q S+ + L + A F+ A Sbjct: 841 LATAQAALTAAQTQVGTLSTQQQLAHTQHETTLSKIEQLTTTLAKERVNHTNAINAFNDA 900 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L AS F D AF AAL+ ++ + L LKQ L + ++L TL H + P Sbjct: 901 LNASTFADVDAFTAALLTDEQVQSLNILKQELNDAIVSTRSLFVSQQATLETHISY-PLA 959 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + T E++ +++ +L+ + ++ +L+++ +QQQ + QI + +++ Sbjct: 960 NMYQQTTKEEVIEQIVPLESQLKTLNDDRAKLAGKLEENERFKQQQAQVQGQIDWLNEKL 1019 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVV 937 YL+ LIGS +G +FR FAQGLTLD+L+ LAN +T RY LQRK E+LE+ VV Sbjct: 1020 TLANYLSGLIGSADGKRFRNFAQGLTLDHLITLANHHMTAFDNRYALQRKDDESLELLVV 1079 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTA 997 D WQAD +RDT+TLSGGE+FLVSLALAL LSDLVS + IDSLFLDEGFGTLD TLD A Sbjct: 1080 DQWQADNLRDTKTLSGGETFLVSLALALGLSDLVSKRISIDSLFLDEGFGTLDENTLDLA 1139 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 ++AL+ L + GK IGVISHV+ M+ERI +Q+KV K G G S L+ + Sbjct: 1140 MNALEQLQSQGKMIGVISHVKEMQERIHLQVKVSKSAGTGTSSLDPKYR 1188 >UniRef50_A1TQH1 SMC domain protein n=2 Tax=Acidovorax RepID=A1TQH1_ACIAC Length = 1164 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 414/1167 (35%), Positives = 564/1167 (48%), Gaps = 127/1167 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT PF+ GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILALRLKNLNSLKGEWRIDFTAPPFSEGGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA--- 117 + VSQ N+LMTR TA+CLAEVEFEV+G YRAFWSQ RAR++PDG LQ P+VELA Sbjct: 61 IGGVSQGGNELMTRHTADCLAEVEFEVRGSRYRAFWSQRRARDKPDGALQAPQVELAQVL 120 Query: 118 -RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + L KV++KL+ LTGLD+GRFT+SMLL+QG FAAFL A +RAELLEEL Sbjct: 121 SDDGAARPLTRKVQEKLQQVEALTGLDFGRFTKSMLLAQGGFAAFLEAPAGKRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGT+IYG+IS V E + ART LE +A+A GV LL + L VL ++ + L Sbjct: 181 TGTDIYGKISQRVHECAREARTALESARARAGGVALLDTAERDRLVQEAAVLDEQMQVLR 240 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + +WL + ++ + + ++ A A + L A+PA L P Sbjct: 241 ERSAATRGERDWLVAVERARERVAEADRQVRDADAAWAARDADVQRLLRAEPAMRLDPLH 300 Query: 297 ERIAEHSAALAHIRQQIEE-----------VNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + +++E L+ T AL + + + Sbjct: 301 GAWLAAVQDERTVASRLQETGAQAQQARARHAAALRRTEALARQVSALRHAEWQAGRDAL 360 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQ----------------- 388 L + R W A+F +E + + + + Sbjct: 361 AGLEAEGIDDPRHAALAARLGEWSARFQALAGLQEDIHRLEAEREGLAIRRAQEQQRQQA 420 Query: 389 -----------LTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 L A + L L A T Q + H A ++ Sbjct: 421 ATGACLQAGTSLAGAREALEHAEGEYLRQLAGHDETHWQQEILRLVEEGHAWADARDLLT 480 Query: 438 QQKRLAQLQVAIQNVTQEQTQ----RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTL 493 + + L+ + ++ AAL + R++E Q L D + + QE RI++L Sbjct: 481 RSEALSARRSRRATARADRQNRVATLEAALRGLEGRHQELRQGLRDQERLLAQEQRIQSL 540 Query: 494 EAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQL 553 E+ R QL+ G+ CPLCGS HPAV AY+AL+ Q+RL ++ L E +L Sbjct: 541 ESHRRQLRPGEACPLCGSQEHPAVGAYEALDVSATQARLDDARRALEALDHERRARETEL 600 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 A+ Q +R + + + QW+A+ A L D + Sbjct: 601 AALRAQEERAAEDEAEDGRAQADGQSQWEALCAVLAWPAGQPDGAALEAAQHRHAASLEQ 660 Query: 614 LLSQRHELQ--------------------------------------GQIAAHNQQIIQY 635 +Q L ++ A ++ + + Sbjct: 661 ARAQVAALGGARDRAEAARRAVQQAEREAAAAGQALALADKDVQVAGRELQALDEALERQ 720 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 ++ +Q L L LP+ E E WL R ++ Q+W+ LQ ++ L Sbjct: 721 TAALQSVRQTLARDLAEQGYALPR--EPEPWLRERGRDVQAWEAACRRRQDLQAQMPLLH 778 Query: 696 PILETLPQSDELPHCEE-----------------------------------TVVLENWR 720 + E ++ R Sbjct: 779 EVAENAASVARQWTERLAALPAPATRPDDGEAEDSAIDAGTVRDVARLEGWLQQAAQSVR 838 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 + +L + LQ+ AA ++ +++A+ AS F D QAFL A M+ Sbjct: 839 SCEDTLASLGGTGRELQRAQADAAGQARQRATAWESAVAASPFADAQAFLDARMEPAERK 898 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 L++ AQ L + + L + ++ + ELA + Sbjct: 899 ALQEAVDRTRQAWTAAQALHGEAGQALERLLA-----SAQSQRGLQDVDGELAAWESQGL 953 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 QG I QL++D R+ Q L+ +IA + E W +LN LIGS +G ++RKFAQ Sbjct: 954 AAAQRQGAIAGQLREDGLRREGLQALLAEIAAQEAEAESWQHLNGLIGSADGARYRKFAQ 1013 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 GLTLD+LVHLAN +L RLHGRYLL R+ LE+EVVDTWQAD RDTRTLSGGESFL S Sbjct: 1014 GLTLDHLVHLANLRLQRLHGRYLLARRTGGDLELEVVDTWQADVARDTRTLSGGESFLAS 1073 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALALALSDLVSHKTRIDSLFLDEGFGTLD +TL+ ALDALD+L + GKTIG+ISHVEA+ Sbjct: 1074 LALALALSDLVSHKTRIDSLFLDEGFGTLDGDTLEVALDALDSLQSGGKTIGIISHVEAV 1133 Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAV 1047 KERIPVQI+V+K GLGYS LE FAV Sbjct: 1134 KERIPVQIRVRKGVGLGYSALERRFAV 1160 >UniRef50_D1RVT6 Exonuclease SbcC n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RVT6_SEROD Length = 1084 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 511/1084 (47%), Positives = 653/1084 (60%), Gaps = 37/1084 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L NV+ SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA+N PDGNLQ P+VELA Sbjct: 61 L-NVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKV+DKL+LTA +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 120 DGKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQ+S VFEQHK A+ +L+ L +ASG+ LL EQ Q L + L L+ +E L + Sbjct: 180 IYGQLSERVFEQHKQAKADLDALHQRASGIELLNDEQRQQLESQLAELSAQETALSGQTR 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q+QQ+LNWL + Q + Q+ L E+ A+PQL L+ ++PA LRP Sbjct: 240 QQQQALNWLQQWQRTQHQQQEYQRQLSVVQQEQAAAEPQLQQLARSEPAEKLRPLHNDRH 299 Query: 301 EHS---------------------AALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 A +A ++Q +E+ Q+ + + +Q Sbjct: 300 RCRSEQQALQQQIAQMAQQQEYQLAQMAPLQQAVEKARAEQQAQAERQQIQQRLIDEQIV 359 Query: 340 ELQQQQQSLNTWLQEHDRF-----RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 L Q L E + RQ + + Q++ Q Q++L Sbjct: 360 PLDHQIAQLQKTQTELQQACDNSARQCHQQTTDLEQLNVQRSQLTAQAGQHQEKLNGLNA 419 Query: 395 KLNALAAITLTLTAD----EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 L A L + AE RP RQ L L +RL Q + Sbjct: 420 ALMAQQQQQNALETQSPLAALRRRQTALAELRPARQQLFTLSSLFRQTSERLEQQRKEFT 479 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 + + L E R+ YK++ DV+ E E RI +LEA+RA LQ+G+PCPLCG Sbjct: 480 ARQAQLGEHEQQLEETRRHYKQQKAHQLDVEKALELEKRIVSLEAERALLQSGEPCPLCG 539 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S SHPA+E YQA++P RL + + + L +G LR + +++ +Q QR + + + Sbjct: 540 SASHPAIEQYQAVKPSETALRLTEMRVKTEALYTQGTELRTRCESLKEQQQRQQQQIEQD 599 Query: 571 RQDEQALTQQWQAVTA--SLNITLQPLDDIQPWLDAQDEHERQLRL-LSQRHELQGQIAA 627 Q + QQWQ ++A + + LQ + + WL+A D ERQ + L+Q + + Sbjct: 600 EQQLASQRQQWQTLSAPLAFDFDLQDAERLSQWLNACDNEERQGQQGLAQHEQAAQAVQQ 659 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 + + Q Q +Q QQ + L + + QQ+ Q ++ +E A Sbjct: 660 AKDALAELQAQQQQAQQQQALLDERFTLLEKNHADAQLQQQRLQQQWQEGEKTLSEHRAQ 719 Query: 688 QNRI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + + Q + + E L E W++ EQ L Q LQQQ + Sbjct: 720 RLALFGEQHIPQVREQLRAQLATCEQASHQAAEQWQKAQEQRDRLAGQLAGLQQQQQRQS 779 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + LQ+A+ + AL AS F D+ AF AAL+D+ QL+Q K+ L ++ +A L+ Q Sbjct: 780 ERLQQAEQTWLEALAASEFSDEAAFSAALLDDAQRRQLQQHKERLHKRQVEASALLAQAV 839 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 TL Q +Q RP+ + Q L Q+L+ QGE+R QL+ DA R QQ Sbjct: 840 HTLEQQRQQRPEGLDETQADAPALSQSLEALAQQLKTLQLRQGEVRNQLESDAARRLNQQ 899 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 +L +QI+Q QQ +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLL Sbjct: 900 SLFEQISQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLL 959 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 QRK S+ALE++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDE Sbjct: 960 QRKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE 1019 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLD+ETLDTALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE Sbjct: 1020 GFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQ 1079 Query: 1045 FAVK 1048 F ++ Sbjct: 1080 FRLE 1083 >UniRef50_A8GAK3 Exonuclease SbcC n=2 Tax=Enterobacteriaceae RepID=A8GAK3_SERP5 Length = 1083 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 517/1084 (47%), Positives = 656/1084 (60%), Gaps = 37/1084 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L NV+ SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA+N PDGNLQ P+VELA Sbjct: 61 L-NVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKV+DKL++TA +TGLD+GRFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 120 DGKILADKVRDKLDMTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQ+S VFEQHK AR +L+ L +ASG+ LL EQ Q L L L +E L + Sbjct: 180 IYGQLSERVFEQHKQARADLDALHQRASGIELLNDEQRQQLENQLIELGTQENTLGEQAR 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q+QQ+LNWL + + QQ+ Q+ L A E+ A+PQL L+ ++PA LRP Sbjct: 240 QQQQALNWLQQWQQTQQKQQEYQRQLNAAQQEQAAAEPQLQQLARSEPAEKLRPLLNERN 299 Query: 301 EHSAALAH---------------------IRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 ++Q +E+ +LQ+ + + + + +Q Sbjct: 300 RCRNDQQALQQQISQLTQQQEQQLAQMAPLQQAVEQARAQLQAHVEHQQTQQRLIDEQVV 359 Query: 340 ELQQQQQSLNTWLQEHDRF-----RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 L Q L E + +Q+ + Q++ Q Q++L Sbjct: 360 PLDHQIAQLQKTQAELQQACDSAAQQYAQQKTALEQLEVQRSQLTAQAGQHQEKLNGLTA 419 Query: 395 KLNALAAITLTLTADE----VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 L A TL A + + AE RP+RQ L L +RL Q + Sbjct: 420 ALTAQQQQQNTLEAQSPLMVLRQRQTELAELRPVRQQLFTLSSLFSQVSERLEQQRREFA 479 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 + + L E RQ+YK++ ADV+ E E RI +LEA+RA+LQ G+PCPLCG Sbjct: 480 AHQTQLGEHEKQLEETRQQYKQQKNHQADVEKALELEQRIVSLEAERARLQTGEPCPLCG 539 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S SHPA+E YQA++P RL + + L +G LR + +++ +Q QR + Sbjct: 540 SCSHPAIEQYQAVKPSETALRLAQMRATTEALYTQGTELRTRCESLKEQQQRQQQLITQD 599 Query: 571 RQDEQALTQQWQAVTA--SLNITLQPLDDIQPWLDAQDEHERQ-LRLLSQRHELQGQIAA 627 Q QQWQ ++ + + TLQ D + WL+A D ERQ L Q + + Sbjct: 600 EQQLATHLQQWQTLSTPLAFDFTLQDADRLSQWLNACDNEERQGQATLLQHEQASHAVQQ 659 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 Q+ Q Q +Q Q Y L E + QQ+ Q ++ E + Sbjct: 660 AKDQLAALQTQQQQAHQEKARLDERYILLEKNHAEAQLQQQRLQQQWQDGERVLGEQRSQ 719 Query: 688 QNRI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + + QQ+T + E L E W++ EQ L Q LQQQ + Sbjct: 720 RLALFGEQQITQVREQLRARQTACEQASQQAAEQWQKAQEQRDRLSGQLAGLQQQLLQQT 779 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + LQ+A+ + AL AS F D+ AF AAL+D+ QL+Q K+ L+ ++ +A L+ Q Sbjct: 780 ERLQQAEQVWLQALAASEFSDETAFSAALLDDDQRRQLQQRKEQLQQRQVEASALLAQAV 839 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 ++L Q Q RP+ + + Q LA Q+L+ QGE+R QL+ D R QQ Sbjct: 840 DSLKQQLQQRPEGLDEHQTDPQALSQSLAALAQQLKTLQLRQGEVRNQLESDTARRINQQ 899 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 +L +QI+Q Q +DW YLN LIGSKEGDKFRKFAQGLTLD+LV+LAN QL RLHGRYLL Sbjct: 900 SLFEQISQSQSQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLL 959 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 QRK S+ALE++VVDTWQADA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDE Sbjct: 960 QRKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE 1019 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLD+ETLDTALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKK+NGLG S+LE Sbjct: 1020 GFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQ 1079 Query: 1045 FAVK 1048 F ++ Sbjct: 1080 FRLE 1083 >UniRef50_Q897Z0 Exonuclease sbcC n=1 Tax=Clostridium tetani RepID=Q897Z0_CLOTE Length = 1045 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 176/1073 (16%), Positives = 396/1073 (36%), Gaps = 64/1073 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + IDFT + +F I GPTGAGKTT+ DAI AL+ E Sbjct: 1 MKPLKLTMCAFGPYADVQIIDFTE--LDNRNIFLINGPTGAGKTTIFDAISYALFGEASN 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-VELARC 119 + ++EF ++ + Y+ + R + G + E Sbjct: 59 TNKDRDGLRSDFASQETITYVDLEFSLRDKKYKVTRYPQQPRKKSRGEGFTYKNSEAFLI 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 V E + G++ +F + ++L QG+F L A ER + ++ GT Sbjct: 119 LSEGNTVSGVTLVEEKINEILGINKNQFRQIVMLPQGEFRKLLEADSSEREIIFRKIFGT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQ----ASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 E + + ++ ++ K ++ K+ + V + E++ + + L +E L Sbjct: 179 EHFEKFQKVLDDKRKEIYKDIAKVNTERITNVKRVDVTNNEELSKIIDK-ENLNFKEIIL 237 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + E + ++++ + + + EE + + + L Sbjct: 238 GIEEIIENDEIQEQNLSKKIEEINGEEIKIQNEIVLLEEVNKKIKEKEEYEKKYKELIFQ 297 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 E L R+ +E T L++ + + K+ E++Q+ ++E Sbjct: 298 KEEYENKKDKLYQGRKALEV--TMLENNFKEKENYFQLKEKEYIEVEQRVNLYRKKVEES 355 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD------ 409 + + R + S + + + + + + ++ + + Sbjct: 356 IKKLKEEESKEEERKETSNKLTILKSFQNKVRDYEEKKNRIEQIKGELEKKQKEYSSLGS 415 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ- 468 ++ + L + ++ + +V ++ N+ L +++ Sbjct: 416 KIKNDRTKLNNLNKEFVELQKCEVEKEKILSKVEEKEVICNDMRDFYKYYNSYLINIKKH 475 Query: 469 --------RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + ++K + I E + L+ G CP+CGS HP+ Sbjct: 476 GNLKINFDKIEKKYMETKLKYEIMEDNFKKGQAGILAKDLKDGVKCPVCGSKHHPSPAEM 535 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 P + +L ++ E ++ E+ + + + + + + + Sbjct: 536 IKGVP--TEEKLNQIKYEFDEIKEQRDMILQNMSDLNGVITSSNEIISDYKLKLEKSLGK 593 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 +I + + + L+ ++ + + Sbjct: 594 IIEEYWKKDILNFIS-------------IKGKEIALEVENLKEKLKQIEEDNKKKINIKN 640 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 +L L +E + A + E S + E+ + +L ++ Sbjct: 641 SLIKLEEEIEENNILLEKLNEEYKDSFAKVKSEESSILAIEKEIPEKFRSVPELNKKIKN 700 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + + + + ++ + ++L + +++ + + ++K + + + Sbjct: 701 IENKLLELNQLLEKARKEYEVINNEYISLKTNKKSKLENLQELLKEIEKNKDNMNKKIIE 760 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 D +LA + E L L++ Q+ + + + + + Sbjct: 761 CGLKDYNNYLAVKLSEDQLKSLDEDIQDYNQNIKIIKFNLNRAINNSKDLEFI------- 813 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 ++ I+++L + +Q+ + + +L + ++ + L ++I++ + Sbjct: 814 ---DLDIIKEKLEKVNQEKNQLNREYNIVFSRLDNNIKTLKEIKKLNEKISEKEDDYKII 870 Query: 881 GYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-------E 930 G L + ++ F ++ D ++ AN +L+++ G R+LL RK E Sbjct: 871 GELARISNGDNDERITFERYVLAAYFDEIIAAANIRLSKMTGGRFLLSRKEEKGKGRRQE 930 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 LE+EV D + A R +TLSGGESF SL+LAL L+D++ + +D++F+DEGFG Sbjct: 931 GLELEVFDNYTGKA-RHVKTLSGGESFKASLSLALGLADVIQSYAGGISLDTIFIDEGFG 989 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 TLD E+LD A++ L L G+ +G+ISHV +KERI +++ ++ Sbjct: 990 TLDPESLDNAIETLVELQNGGRLVGIISHVPELKERIDSILEIIPTKEGSKAR 1042 >UniRef50_B7AP63 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP63_9BACE Length = 1037 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 182/1078 (16%), Positives = 362/1078 (33%), Gaps = 88/1078 (8%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 + S I+F R GLF ITG TG+GKTT+ DAI ALY ET + Sbjct: 1 MSAFGSYADRVTIEFDR---GREGLFLITGDTGSGKTTIFDAIMYALYDETSGGNRSGNM 57 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-------CA 120 + E FE Y + R N Sbjct: 58 MRSQYADADTDTWVEFTFEYGNNIYSVRRNPEYIRQSKRRNADGSARYTTEKPDVTLTMP 117 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG K+ + GLD +F + +++QG F L A +R E+ + TE Sbjct: 118 DGSEFTGNKKEVNGKIVEIIGLDAKQFAQVAMIAQGDFMKLLYADSDDRREIFSRIFRTE 177 Query: 181 IYGQISAMVFEQHKSARTELEK--------------LQAQASGVTLLTPEQVQSLTASLQ 226 Y +I + ++K+ +LE +A L + SL Sbjct: 178 DYQRIQYELQARYKNIYGQLEDNRKIYDSRIGQIKVTEAYNERYRQLCERKEPDYEESLT 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 +L D + + LT Q + A R + E +KA + + Sbjct: 238 LLGDIIASQQSLYDSLNAEKDELTGQRDNNNAAIGRAKQTNSLFDEYDKAAAETLDIEQR 297 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 +P + A+ +AA+A + + + +L+ + + + + L +Q Sbjct: 298 RPQADGMRRELEAAKRAAAVAVLDDKRTDAEEKLRQSEKRVKELATWIDEAAKRLDRQSA 357 Query: 347 SLNT----WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 L+ + E + R E + S ++ + + AL Sbjct: 358 ELSGISAVYNDECPKLRLQAEEIRKSIPDYDTFGSRKKEFDALNNRKKDLNNQKAALEEE 417 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 A + A L ++ I ++ L +++ I+++ ++ + Sbjct: 418 LSRQKAYQDG-ITAFQNGNADCMVRLEKVNNTISDKKDTLDRIR-KIEDLQEQLLKMRKR 475 Query: 463 LNEMRQRYKEKTQQLA---DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + Y + E QL+ G PCP+CGS HP A Sbjct: 476 HEQKSSEYLNARNEYEHASACYERLEALFMSGQAGILARQLEDGMPCPVCGSVIHPNPAA 535 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 + V Q+ + K + + + ++ EQ++ Sbjct: 536 FNNE--DVTQASVDEARRSRDKADAARQNMYTETVIAKSECD------NQIKLIEQSIQS 587 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 +IT L + D +E + + + ++ + ++ Sbjct: 588 VMGDDGQDEDITGLKLKTEKELTDVGEEMRKLNETARIYRDNEDKLKKLTSDLSDMSVRV 647 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 + + + A + L + + I++ Sbjct: 648 DSLKNEISQDEVQLAHMESEISALSKNLR-------------------YSDRSEAEKIMK 688 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L E + ++ + Q+ ++ + A +++ Sbjct: 689 ELEDRIAAVEKSWLSRQELVANLQKELAGKRGEADNEQKGAEKLRETYEAACRALADSVE 748 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 + F + + A D+ + LE + + + A + Sbjct: 749 SEGFASEAEYKEAKRDKVAMAVLEAGIAEYDREVADNAVKIKTLAAQIDG---------- 798 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 + V ++ + + + + +RE + GE+ ++ + + + + ++ A + Sbjct: 799 KMRVDTQEAEAAVVRIEKLIREKSGHMGELYADIRANQEIADEFAKMSEERAGAMHKYRI 858 Query: 880 WGYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA------ 928 + L + F F ++ AN++L+ ++ G++ L + Sbjct: 859 YATLYNTANGSLTGSVKINFETFVLRQYFKKIISAANRRLSAMNDGQWCLMCRDIDNIDN 918 Query: 929 ---SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFL 982 L+++V D ++VRD +TLSGGE+F+ +LA+AL +SD++ R+D++F+ Sbjct: 919 KGRKSGLDIDVHDELT-NSVRDVKTLSGGETFMAALAMALGMSDIIQNRTGAVRLDTMFI 977 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 DEGFG+LD + A++ L L + IG+ISHV +KE+I Q+ V K K Sbjct: 978 DEGFGSLDDYSRQQAINILKGLADGRRMIGIISHVTELKEQIECQLVVSKTGRGSSVK 1035 >UniRef50_B8KMM6 Nuclease sbcCD subunit C n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMM6_9GAMM Length = 1025 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 207/1073 (19%), Positives = 383/1073 (35%), Gaps = 79/1073 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L G IDFT F + LF I G TGAGKT++LDAIC ALY +T Sbjct: 1 MRPEWLSLSGFGPFGGTVTIDFTE--FGESPLFLINGSTGAGKTSILDAICFALYGDTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQP-----DGNLQVPRVE 115 +DT+ + F + E Y + R D Q P Sbjct: 59 GERSGAEMRSQFAKDTSPTEVSLRFSLGTERYLVTRNPRYMRAPKKATGADLTTQQPGAT 118 Query: 116 LARCA------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 L R DG ++A V L +TG+ +F + ++L QGQ+ L A +R Sbjct: 119 LYRLGHTLDPDDGDLIATGVAKVLPEIEAITGMSADQFRQVLVLPQGQYRDVLTAPSADR 178 Query: 170 AELLEELTGTEIYGQISAMVFEQH----KSARTELEKLQAQASGVTLLTPEQVQSLTAS- 224 E+LE L GT IY ++ + + +S EK++ + S T E++ L Sbjct: 179 EEVLERLFGTTIYVRLEEALRKHAGDIGRSIEGANEKIRHELSQANASTEEELNELIQRS 238 Query: 225 ---LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 +E + A + QQ + + ++ Q+ + +AL + + E + Sbjct: 239 IEDEAKSDNELLKATAALESLQQKIGNVEANNKALQDLDKAAKALMEHQSNSESMEQDRK 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + AQ A+ + ++ + + R Q T S Sbjct: 299 RIKRAQRAQPILALSAQVVSAETRSNSADEHVNSCGQRAQDTKEAAEKAEAALLSLSTP- 357 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 + Q L ++ E + + + L ++N Sbjct: 358 -EAQDVLQKLRDRLKELSRYRGEMPTYLGLIDLVEGETALCKSASDALDAVLVEINEHQK 416 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + L + ++ L + A + ++ + Sbjct: 417 EISEASVQLQLHRRRIGEVVSELT------AKTVFESRRDLLKKIDARSKLAVQEEEERT 470 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + +K + ++ T+ + + +L+ + CP+CGS HP Y+ Sbjct: 471 THVTLLSKCLQKETEARELSTVVQMQWHSAQAFLLSKELEPDRRCPVCGSQEHPHPATYE 530 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P + ++ + R + ++ + E+ L+Q+ + Sbjct: 531 GTAPS---------QVDIDAAQQAHDVSREAVFDARQKKEASESTIARLQQEMSEFRNEL 581 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 SL + + ++ + + E +R L + I+ +++ ++ + + Sbjct: 582 GDYDGSLLDVDEEIIRLKQLEEEKASIEEAVRELDEA------ISNADEKSLRLKASEDT 635 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 ++ L T + + + L A L + Sbjct: 636 ARKKLDDAR-----------------QTLARAETRLEDARKALPAEYRDQANLDSTYAEV 678 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + E E E ++ + + +T + + L+ + D A+ S Sbjct: 679 STNLEARERELVAAQEAMITTTDKSSSATAVLETAVKAACDLKEELRVVKEGLDEAVAES 738 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F + L A + + + L+Q + D L Sbjct: 739 DFASIEDVLKAALSQDDIDALQQALDEYGTTLGVLTGRLKAAETAALGLVVENIDPLLVE 798 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 E ++QE + T R + Q+ ++ L + + + Sbjct: 799 LQNAESVRQEALGVRNTAHDRTVLLNSCRVAINQERQAQESAYALYEVVGTLADVG---- 854 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS-------EALE 933 + + + F +F G LD+++ A+ +L + GR+ L+R+ S L+ Sbjct: 855 --SGRVEGTQKLSFHRFVLGTILDDVLTQASMRLRSMTSGRFELRRRNSASDKRSVAGLD 912 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 ++V D + + R +LSGGESF+ +L+LAL LSDLV S +D+LF+DEGFG+LD Sbjct: 913 IDVFDEYTG-SARPATSLSGGESFMAALSLALGLSDLVQAQSGGIHMDALFVDEGFGSLD 971 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 E+L+ A++AL L SGK IGVISHVE +K R+ +I V L S Sbjct: 972 PESLEQAIEALIRLRDSGKMIGVISHVEELKARMDKRIDVTSGPNGSSLSLVS 1024 >UniRef50_A6D4U6 Exonuclease SbcC, putative n=1 Tax=Vibrio shilonii AK1 RepID=A6D4U6_9VIBR Length = 1014 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 231/1062 (21%), Positives = 414/1062 (38%), Gaps = 69/1062 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ G+ IDF++ LF I GPTG+GK+++LDAIC ALY ET Sbjct: 1 MKPLKLTLQAFGPFSGKESIDFSQ--LGDCPLFLINGPTGSGKSSILDAICYALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR---VELA 117 EFE+ GE Y S ++ + G R L Sbjct: 59 SERTGDQMRCDYADSKTLTTLVFEFELSGEKYEVTRSPDQEVPKQRGEGTTKRSHSATLL 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + ++ ++A+K K L GLD +F + M++ QG+F L A KER + +L Sbjct: 119 KLSNNTLIANKPKQVGVAIQELLGLDVKQFRQVMVIPQGKFRELLTASSKERESIFGQLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEKQLI 236 T++Y I +F++ R E+ Q G + + + E +Q L SL VL+ ++ Sbjct: 179 QTQVYAAIERTLFDKAAGIRKAKEEFDNQIKGALDVASLESLQQLNDSLDVLSPNVERAK 238 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 Q ++ N + + Q +R QA AE + + ++L + Sbjct: 239 QELQVVEKRKNQAQQIYDQAQSLEKRFQAKSNVEAEAKTLNDKRGEIALNKQIMTSHKQA 298 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 +I + Q + ++ R+ L+QQ+ + + Sbjct: 299 IKIKPTFDETIKLEQNMSTLSERIDIGRGKIQQAEKERDASITALEQQK----LVHKRSE 354 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 + + +Q R + Q ++ ++ L A + T Sbjct: 355 ALNEESYSLKQLEKTLNQLDDKRREAQHADSQFNTYVEQHKQVSDEVERLQAQTL-TFEK 413 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK--- 473 ++ R +Q L + + ++K+ ++ ++ + LN+ + K Sbjct: 414 SLSDARKEKQKLGEVTMSLSERRKQWQGIET-LKTIAANIVALQKQLNDTQSTVKNLSAS 472 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 Q +T CE A L+ G CP+CGS HP + A + Sbjct: 473 AQAATRKRTECEIAWHSSQASILAATLEEGTACPVCGSVEHPKLAAPSQETVSL------ 526 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 ++ R ++ +L + + E L + Q + SL + Sbjct: 527 ----------QQLNDFRANETSVNAELNQQQQELVRLNSVLDSAVLQRSDLINSLELDEA 576 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 LD Q + +L + N+ + + + ++ L ++ Sbjct: 577 KLDQSAIETQNQITMLENKITELNKIDLSAMESRLNKHVSETSAK-QELLNTLTNSVNKA 635 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 A++ Q L + + + R ++ L L Q+ E Sbjct: 636 AISKEQLRAVVVQLESNN------KTGYANAQLVLQRQASISDELMQLSQALEAAQRYAN 689 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 E + L Q + L + + + + T L +S F D++AFL+++ Sbjct: 690 QTAETLVKYQSHLDTLTKQLKDLSNEHASSVER-------WKTLLLSSHFSDEEAFLSSI 742 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 +DE + LE + + + E L + V+++ Sbjct: 743 VDEPRIAALELELETFVRDEVRVSEQLKLLTEELKGVE----------HPNVQELLVAKN 792 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 +T + + + +L + + +L+ Q A++ +Q + G L+ + K G+ Sbjct: 793 ETDASYQHMLGQFQQQQSKLDSLNNVLTRVNSLVSQNAELDKQYQVVGTLSDVANGKTGN 852 Query: 894 K--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------SEALEVEVVDTWQAD 943 K +F G+ LD+++ A+Q+L + GRY L+RK L++ V D + Sbjct: 853 KISLHRFVLGVLLDDVLIQASQRLRLMSKGRYDLKRKETRSKGNAGSGLDLIVEDAYTG- 911 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+DEGFG+LD E+LD A+ Sbjct: 912 KWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLDPESLDLAVQT 971 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 L L SG+TIG+ISHV +KE++P+++ V L Sbjct: 972 LVELQQSGRTIGIISHVSELKEQMPLRLDVHASRIGSTVSLV 1013 >UniRef50_D1BNU5 ATPase involved in DNA repair-like protein n=3 Tax=Veillonella RepID=D1BNU5_VEIPT Length = 1027 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 213/1077 (19%), Positives = 403/1077 (37%), Gaps = 85/1077 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL ++ + +DF + +F I GPTGAGKT++LDA+ ALY E Sbjct: 1 MKPISLTIEAFGPYRDSVTLDFNE--LQDHSMFLIAGPTGAGKTSILDAMVYALYGEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 + + + F + YR + + G V Sbjct: 59 EVRKTDAIRSDFAEPHRMTRVDFSFAIGDAQYRVERLPKQMVAKKRGTGMREQNASATVY 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + K++A + + G +F + +LL QG+F L A ER ELL Sbjct: 119 ERKNGEWKVIATSAAAIRDTIQQIIGFRKDQFLQVVLLPQGEFRKLLVASTSEREELLHT 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP----------EQVQSLTASL 225 L TE+Y ++ + + A+ +E+ + + P E V+ L A+ Sbjct: 179 LFRTELYRKLQETLKAAYDEAKAGIEENLTKQTVFMQSIPHDGATPMVTIEHVRELLANR 238 Query: 226 ----QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 L E + +T +Q N + ++ QQ + L E + Sbjct: 239 GPHRDALAVERDEAVTVVEQFNVLRNQWSLYNQAQQSLAEATSKLDLVKTRETERVNLSE 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + +++ E A L + Q + + R++ A + + Sbjct: 299 KVQFLNSLAPTHELYKQYIEKQAVLKTLEQALSDAEERVKLATQHEAKCLEVYSGLEGQA 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 + Q T L + + + +E + +FS S E L + + A+Q+ Sbjct: 359 ESIQAK-RTTLAQFQQQAEKFDELDVLKKKFSTLHSSLEELDSKKSEDALAKQR------ 411 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L T + AL + + + + + R ++L I V +E + Sbjct: 412 -ELVKTLEADLEALRKQVQDNNKFLENTPIIQEQLNDLHRYSELLEEISKVQKEIDDKGQ 470 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 L + + + L ++ + ++ + +PCP+CGST HP + A Sbjct: 471 RLASLDRTVQVAKVHLERLEHLMQEGR----AFELVHLVVDNEPCPVCGSTDHPRLAAKP 526 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + P ++ R D ++ + + ++L LT+Q Sbjct: 527 EIYPTKDEIE----------------EARIARDIALQKQASEVGQQKTLVTRLDELTKQV 570 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A ++L +++ + + + L + Q L+G+ ++ I + ++ Sbjct: 571 DAQVSTLKLSMDDFSEK----NFASVQQDLLAKMEQLTALRGKSELLSKTIAHKEHNLKV 626 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + L T + L + E +++ Q + + I LE+L Sbjct: 627 ARDKLATLEIAHNELLKNLHDLEIRISSVQANIDALSKTLPT-----TDIAAWQKQLESL 681 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + V N EQ A + +TL Q ++L + +LQ Sbjct: 682 DSEITIYDEQVKVGKTNLDAAREQLNAKRGRLETLSSQVKEETKNLNLMYKNYTKSLQTI 741 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + F+ AL D + +E R Q L + A + + Sbjct: 742 SLA-EDDFVEALRD----------IKEIETYRTQLHALDEAFNKARAVYDAALKASETVV 790 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + + A + + ++ K +TL + + ++V+ Sbjct: 791 KPSDTVSDEIYATAVEHRDTLVGNLAAWDKETKHIETTLNSLETLEAAMGEAREKVKFLS 850 Query: 882 YLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------S 929 LN L + F ++ G LD +V+ AN +L ++ RY L+R Sbjct: 851 RLNDLANGGEQGFKNVTFERYVLGAILDEVVYAANLRLQKMSRNRYSLERSDYTGGGRGK 910 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 + L++ V+D + + R TLSGGE+FL S+ALAL L+D++ + +D++F+DEGF Sbjct: 911 QGLDLAVMDAFTGQS-RPANTLSGGETFLASMALALGLADVIQSYAGGIHMDTMFIDEGF 969 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 GTLD +TL+ A++ L L +SG+ IG+ISHV +K RIP ++V + + +K Sbjct: 970 GTLDPDTLELAMETLVQLQSSGRLIGMISHVPELKSRIPAHLEVIRGDDGSTAKFVI 1026 >UniRef50_A1S519 Exonuclease SbcC, putative n=1 Tax=Shewanella amazonensis SB2B RepID=A1S519_SHEAM Length = 1020 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 237/1065 (22%), Positives = 389/1065 (36%), Gaps = 68/1065 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L + +DF LF I GPTGAGKTT+LDAIC ALY +T Sbjct: 1 MKPLTLAITAFGPFVDTQTLDFR--ALGEWPLFLINGPTGAGKTTILDAICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 D EF + + YR + R + G + A Sbjct: 59 NEREGTQMRCDAAPDDVLTEVTFEFGLGDKVYRVKRMPEQQRAKKSGEGFTVQKSDALLE 118 Query: 121 DGK------ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + A KV + L GL+ +F + M+L QGQF L A KER + Sbjct: 119 RIEGEHTTPLAAGKVTEVTAQIEDLLGLEVEQFRQVMVLPQGQFRKLLLADSKEREAIFG 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEK 233 +L T IY +I + ++ + ++L+A+ +G + E V++L ++ L E Sbjct: 179 QLFQTGIYKRIEDSLKQKALELKARAKELEARRAGILETAGAESVEALNDAISALAPELA 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 A+Q + L Q E + R AL E + +++ Sbjct: 239 SATKAKQAAEAKLTAAKAQREAAEAKLREFSALNDTRLRLEAENAKAESMAALGMQLERA 298 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 E +A A ++ + A + Sbjct: 299 ALAESLAGTWQAWEERAKERKSAEAAAVMAAEAAKQAELSYANAKTAAAALPELEARRH- 357 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT 413 + + A WR + + ++ E + Q L + L + + T +A Sbjct: 358 ---QLKNEAERLAEWRPRMHRLSALNEAITGLGQTLNALDANLAHVRSRLGD-TQGRIAM 413 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA--ALNEMRQRYK 471 Q + L +L +V Q + Q I+ Q Q L ++ K Sbjct: 414 LTQQRRDLSALASTAGSLEATLVQQTHVFERHQQLIEKERQAQKLATELSRLEADGRQAK 473 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 L + + E A+L G PCP+CGS HP+ ++ PG Sbjct: 474 ANQDNLTRARELLELAWHQGQAAMLAARLLPGAPCPVCGSVEHPSPAHHEGALPG--DDE 531 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L A ++ E + R + A ++L+ + E + Sbjct: 532 LAAAREAEQQAREMLSRARSEYKAQKQRLEVMQQELAN---------------------- 569 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 D E++ L QR E A Q + + ++EQ L Sbjct: 570 ----DAAALGDALATSLEQKQYALGQRREACQNAKAAQQSLQALEHELEQLDNTQKQLLA 625 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 Q D+ L E +S EL Q L L Q E + Sbjct: 626 DIDGLQRQRDQHSGELQKACGEQESLAGAMPELCQRLGNEQAFDAHLAALSQDIEALSGQ 685 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 + + + ++ LQQ A A+A+FDT L A F+D +F Sbjct: 686 MEKLQTQLSDAQIRQTQCNERRAALQQTLSEARSREAAAKARFDTELAAKGFNDVVSFNQ 745 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A M + + + Q + + E+L + AL + + Sbjct: 746 ARMTADDMGDAKSRIATWQQQLAGLKERMAAQQESLGDVLPPDLTELAALETAAQDGFNQ 805 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 Q Q L + R QL +A+ + + ++ G L+ Sbjct: 806 CNQQWQVLNDTQVMYSRARAQLGTEAEVAAR----------LDEEYAVVGTLSDAASGMT 855 Query: 892 GDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQ 941 G + ++F G+ LD+++ A+++L R+ GRY L R+ L++EV D + Sbjct: 856 GARISLQRFVLGVLLDDVLIEASERLHRMSKGRYRLLRREDKAKGNRASGLDLEVEDAYT 915 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 +R TLSGGESF+ +L+LAL LSD+V + ++D+LF+DEGFG+LD ++L+ A+ Sbjct: 916 G-KLRPVATLSGGESFMAALSLALGLSDVVQAYAGGIKLDTLFIDEGFGSLDQDSLELAV 974 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L L +SG+ IGVISHV MKE+I ++ + K +L Sbjct: 975 RTLVDLQSSGRMIGVISHVTEMKEQIQTRVDIHKDTVGSQIRLTV 1019 >UniRef50_C1I2I3 Exonuclease sbcC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I3_9CLOT Length = 1044 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 178/1078 (16%), Positives = 395/1078 (36%), Gaps = 79/1078 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L + ++DF +F ITG TGAGKTT+ DAI ALY E Sbjct: 1 MKIRKLIITGFGPYAERQELDFESS-LDGKNMFVITGNTGAGKTTIFDAINFALYGEASG 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ + E+ F ++ + Y S R + G+ A Sbjct: 60 SERDGKNLRSDFADKSTPTEVELWFSLRNKEYYIKRSPQYFRAKQRGDGFTESKPSAEIK 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G K+ L + G+ +F + +++ QG+F LN+ ++ E+ ++ GT+ Sbjct: 120 IGDKTVSGPKEVTRLVEEILGITCEQFKQLVMIPQGEFKKLLNSDSDKKEEIFRKIFGTK 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQA---------------------------QASGVTLL 213 ++ I + + + + +E++Q + Sbjct: 180 VFSDIQQNIKLEANNLKKSIEEIQRDRENRIKAFACKEDDDELRRIVNAKDLNIELILSK 239 Query: 214 TPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEE 273 + + A ++ ++ K + + L ++ + + L + + Sbjct: 240 FKDAIDKDEAEENIIKEKLKDINIEINNISKELVLANDINKKIDNLEKYKCDLDKLNLLK 299 Query: 274 EKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHH 333 + + + L + A + ++ E +L + + + L Sbjct: 300 HEYEVKTIKLESGKKAVTVLGFEDKYKEKKLSLLKAEESLRKSIENLNKYKKEFDDAERK 359 Query: 334 AAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAE 393 K E + + L + E ++ ++ + + + + + +++ + +Q+ Sbjct: 360 L-KIENEKEDLKNDLRKKIDEIEKLKEKASIYQSNKEKLDKLMKESQYIIERIKQI---- 414 Query: 394 QKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT 453 + ++ L + + + +L +Q++L +L A++ Sbjct: 415 ----DIDRNKKNDLLKLLSEELENINKLKEEKSNLDIKEINYTSKQEKLNKLLSALEKCK 470 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 E + KE + E+ R L G+ CP+CGS Sbjct: 471 LESQRHVKGTAFYENADKEYNDK-KKNYEKLEEAFRRNQAGILAKGLIEGENCPVCGSIH 529 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 HP + ++ E VK+ + ++ ++L + + E SL+++ Sbjct: 530 HPKLATIESGNIN---------EAAVKESKALADKFYEKRESYYRELTKIQAEISSLKEE 580 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + N ++ + + SQ ++ + + + Sbjct: 581 TIKPIFIEVFNKENFNDDIEISIEKVKF--------ELKNNYSQLDKVISRKKEIEKVVS 632 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 +++Q++++ T + E + + + + Q +E ++ Sbjct: 633 LELTKLKQKEEVEKYTEELRIDLENKNKELLAKEGELKIQETNLQNIVDEFKGTIRNVKD 692 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + + E + +N+ + + + +L++ A L+ A Sbjct: 693 LEEEQLKVKGTLEKLKEDYLKAEKNFNNIKTIYDKENGNKSSLEKVTENAKLELEDALKL 752 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 F + F++ + ++ M + + +LE+ A+ + + E Sbjct: 753 FKEKVLELGFENYNDYSSSRMTQVEIDELERDINKFNIDLSNAERVYNLSLEECKDLN-- 810 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + V I++ L + S+ EI ++ Q+ + + I Sbjct: 811 --------KIDVRNIEEALEVKSNEKINLDKSEKEIYLRISQNKRIVGECINYSKLIEAD 862 Query: 874 TQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS- 929 ++ + G L +I K F ++ ++++ AN + +++ R+ L RK Sbjct: 863 EEKYKTVGKLAKVINGDNPRKISFERYVLAAYFEDIIEAANIRFSQMTCNRFELLRKEEL 922 Query: 930 ------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSL 980 + L++EV D + + RD +TLSGGE F SL++AL L+D+V S ++D++ Sbjct: 923 GDKRKGQGLDLEVFDNYTGKS-RDVKTLSGGECFKASLSMALGLADVVQSYSGGIQLDTM 981 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 F+DEGFGTLD E+LD+A++ L L G+ +GVISHV+ +K+RI +++V N Sbjct: 982 FIDEGFGTLDPESLDSAIECLIDLQDDGRVVGVISHVQELKDRIETKLEVSSTNKGSK 1039 >UniRef50_B2VIR7 ATP-dependent dsDNA exonuclease n=6 Tax=Enterobacteriaceae RepID=B2VIR7_ERWT9 Length = 1119 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 486/1117 (43%), Positives = 627/1117 (56%), Gaps = 77/1117 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR KNLNSLKGEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L N++QSQNDLMTRDTAECLAEVEFEVKG A+RAFWSQNRAR DGNLQ PRVELARC Sbjct: 61 LKNITQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQNRARGAVDGNLQAPRVELARCE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D I+ADKVKDKLE A+LTGLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTGTE Sbjct: 121 DNHIVADKVKDKLENIASLTGLDFERFTKSMMLSQGQFAAFLNADANKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S+ VFE+HK A+T L+ L+AQA + LL EQ QSLT+ L L D+E+ L + QQ Sbjct: 181 IYGRLSSAVFERHKEAKTALDALRAQAGAMDLLDAEQQQSLTSQLAQLLDDERVLTSQQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +QQ+L L + + LQQE + QQ + E+A+ QL A L + + L+ + + Sbjct: 241 GQQQALQQLQQLERLQQEQQQLSHQRQQLDEQIEQAKRQLGAADL-EQQQALKAYDDHQQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 I +Q+ ++ +L + + ++ L + Q + Sbjct: 300 HRQQQETLIAEQVIPLDHQLATLQEQSEQLAREQSEHQQLLTARLTESAKNQQIQQDKQA 359 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT------------- 407 WR + EHL W+++ +Q +L A++ L Sbjct: 360 QQQLLNQWREAHPHFSHYGEHLPLWRERFNQQQQSEQSLLALSQRLKLQQQTVQQQEQAL 419 Query: 408 ------------------------------------ADEVATALAQHAEQRPLRQHLVAL 431 + + AL Q + RP RQ L L Sbjct: 420 QQLSQQAAPLQQQLDAAQHSLNQAQQALAPLQQQHPQESLRNALEQFSRLRPHRQLLATL 479 Query: 432 HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIK 491 Q +R ++L+ Q + Q+ Q + L +R R+ EK Q D+ C E RI Sbjct: 480 LPQWRQLGERRSRLKQEQQALAQQIQQCSEQLLTLRTRWAEKRQHEQDLDKRCRLEQRIA 539 Query: 492 TLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRG 551 LE QRA L++GQPCPLCGS +HPA+ Y+ALEP NQ RL L+ EV+ LGE+G+ + Sbjct: 540 DLEQQRALLESGQPCPLCGSENHPAIAEYRALEPSENQQRLNGLKEEVRVLGEQGSACKA 599 Query: 552 QLDAITKQLQRDENEAQSLRQDEQALTQQW-------------QAVTASLNITLQPLDDI 598 QL + QR + + L + L QQW + + Q Sbjct: 600 QLKQQQELAQRQQQDDDDLARQATELEQQWHGAAALLALAFSPDQHQQAHDWLAQQEQQE 659 Query: 599 QPWLDAQDEHERQLR-----------LLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 + E+ LR +L+ Q A H Q++ + + + +Q L Sbjct: 660 SELQQQLNRLEQALRHCQQQQESLYQQQQAWQQLERQTALHQQEMTTTRHSLSELEQQLE 719 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + L + E +Q + QQ L TL Sbjct: 720 QDRQRARQLRGDLAASLAPLELQLPEDGDYQGWLQIREQQWQQWQQNAAELATLAPELAA 779 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA--QAQFDTALQASVFDD 765 + + E RQ + AL ++ + QQ Q Q+ A + Q + Sbjct: 780 LGSRQQALEEERRQQQSRLEALDARSRQQQQTLSECQQQRQRLFGNALVTSVRQQLNGES 839 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 ++ +Q +L+ L Q + + L + R + LT Sbjct: 840 EKHQHNLHQQQQQWQRLQDRINTLTGQHKSLNEQLVNLHSRLDEAV-KRVEQPENLTAQQ 898 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + +Q L Q+LRE + QG++RQQL DA R QQQ+L+ Q+A QQ+EDW YL+ Sbjct: 899 QILQASLEALSQQLRELASRQGQLRQQLDHDAARRLQQQSLLAQVAANEQQLEDWSYLHD 958 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAV 945 LIGSK+G KFR+FAQGLTLD+LV LAN QL+RLHGRYLLQRK+ EALE+EVVDTWQ + Sbjct: 959 LIGSKDGSKFRRFAQGLTLDHLVWLANNQLSRLHGRYLLQRKSQEALELEVVDTWQGETR 1018 Query: 946 RDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALN 1005 RDTRTLSGGESFLVSLALALALSDLVSHKTRI+SLFLDEGFGTLD++TLD+ALDALDALN Sbjct: 1019 RDTRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAQTLDSALDALDALN 1078 Query: 1006 ASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 ASGKTIGVISHVEAMKERIPVQI+V+KINGLGYS+L+ Sbjct: 1079 ASGKTIGVISHVEAMKERIPVQIRVRKINGLGYSRLD 1115 >UniRef50_C9RQA3 SMC domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA3_FIBSS Length = 1182 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 266/1177 (22%), Positives = 468/1177 (39%), Gaps = 146/1177 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI + N+NSL GEW IDF FA+NG+F I GPTG+GKT++LDAICL LY +TPR Sbjct: 1 MKIKKIEFCNINSLAGEWTIDFESPDFANNGMFCIAGPTGSGKTSILDAICLGLYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L + N++MT DT C A+V FE KG Y + WSQ R+ ++ Sbjct: 61 LGAIKGDSNEVMTYDTLSCYAKVTFECKGVVYSSCWSQRRSAKTKKLQKYAWVLKNETTQ 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + + + + GLD+G+FT+SM+L+QG+F FL ERA +LE+LTG Sbjct: 121 NVDVSSSNQTEIEATMTRVIGLDFGQFTKSMMLAQGEFNRFLKCSENERAAILEKLTGDG 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +I+ V + + A ++ ++ + VT+L+ E++ L A ++ T ++K L + Sbjct: 181 IYRKIAVAVHDLYACANRAVQDIENRLGDVTMLSEEELAELNAKIEEATAQKKALNENVE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + W ++ + ++ L++A + +P L A A+ + + Sbjct: 241 RLLYICTWFETLHNIESHLNTAKEGLEKAERAKADFEPDREKLERAVRAQEVESSYAEYN 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 L ++ Q+E+ +L + + + + L++++ + ++ Sbjct: 301 SVRDNLGRMKDQLEKSKGKLPEAESNLERATNDNSVKQEALEKRKAEYSAGETLWEQVSA 360 Query: 361 WNNEPA----GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT--- 413 + + + + Q ++ + +++ + Sbjct: 361 LDGDIRNSHTQLKGLDDDAAKIATEISSTQTKIKEFDNRISENETALKKVETYIAENGND 420 Query: 414 ---------ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 A +E+ + Q+ Q+K L + A + QE LN Sbjct: 421 EKIDGLLPLLKALASERTQEWTSVSKESQQLDDQKKALQKFDEACEQQKQELGALRDYLN 480 Query: 465 EMRQRYK-----------------------------------------EKTQQLADVKTI 483 E + + E+ + LA++ T+ Sbjct: 481 EHQIDAELVNLLPEMNGYANDVDRHHKESVRLQGEISSRQKSLDGVISEREKALANLTTL 540 Query: 484 CEQEARIKT------LEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN-----QSRL 532 ++ I + R L+ G+PCP+CGS H + E +E G + ++L Sbjct: 541 QNEKESIIQEDIPVVVAELRHTLKPGEPCPVCGSREHLSCEDSAKVENGADRLNDFAAKL 600 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQL----QRDENEAQSLRQDEQALTQQWQAVTASL 588 + E++K+ Q + + Q+ + EA + + L + + S Sbjct: 601 RKINGEMEKVQRALDGFATQQQNFEELIRESSQKAKEEADAETSSLELLNSKLEPWKNSA 660 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHE----------------------LQGQIA 626 N + ++ L + + + ++ + Sbjct: 661 NFEKATFESVRGILQNLQSLKTTYLQKKESADGLQNNVNNAAIQRAELVGTLSRIEESLK 720 Query: 627 AHNQQIIQYQQQIEQRQQ------------LLLTTLTGYALTLPQEDEEESWLA------ 668 ++ + +++E + + LL L + E++ L Sbjct: 721 KAQDKMQELSKELESKLEPWFSNIRMEDLDALLAELEKKNGLWNKAQEKQVKLQGELETF 780 Query: 669 ----------------TRQQEAQSWQQRQNELTALQNRIQQL------TPILETLPQSDE 706 + + ++ + L L+NR ++L S E Sbjct: 781 RSNVSQLNENLGLTQSRLDEAKRKIEESRGNLATLENRRKELFGEKSVEEERNKARTSRE 840 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 E +Q+ E +AL L A L + Q F L F D+ Sbjct: 841 TAEREADSARRLEQQMREAKIALDKSIADLNGHIADAEPKLAELQKLFLENLTLKSFADE 900 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 Q FLA+ + E L Q ++ +++ AQT V + LA+HQQ R T + Sbjct: 901 QEFLASKLPESDRKALLQKQKLVDDNLTTAQTSVKNFNDQLAEHQQKR-----NFEETED 955 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 +Q KL E T + +Q K DA NRQ+ + +++ ++ + DW + Sbjct: 956 VAKQNRDTAKSKLNECTVNLATWTEQKKTDALNRQKFSDMQEKLVELKSKRSDWEQMQRW 1015 Query: 887 IGSK-----EGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 GD F KF Q +TL NL+ +AN L + RY + L +++VD Sbjct: 1016 FNGNRLETGNGDVFVKFIQTITLRNLLKIANGYLHDMFPRYEMV-TEENTLNIQLVDHDN 1074 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 +DAVR +SGGE FLVSL+LAL +S L S IDS+FLDEGFGTLD++ L + L Sbjct: 1075 SDAVRPIDNISGGEGFLVSLSLALGISTLASRNVSIDSMFLDEGFGTLDTKMLQETVVVL 1134 Query: 1002 DALNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 + GK +GVI+HV+ +K + I+V G Sbjct: 1135 QKMQQEKGKLLGVITHVDVVKSELRTHIEVTHNGGRS 1171 >UniRef50_C1TLX9 ATPase involved in DNA repair n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLX9_9BACT Length = 1194 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 280/1195 (23%), Positives = 509/1195 (42%), Gaps = 150/1195 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L LR KNLNSL+G W IDF + + + LFAI GPTG+GK+T+LDA+CLALY TPR Sbjct: 1 MRLLRLRFKNLNSLEGRWSIDFRDQRYLDDCLFAIVGPTGSGKSTVLDALCLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS V+ S+N++M+R T EC A+VEFE GE+YR WSQ+R+R P G LQ P L+R + Sbjct: 61 LSRVTGSENEIMSRKTGECFAQVEFEAGGESYRCTWSQHRSRKSPSGKLQQPTHLLSR-S 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G++L + + LTGLD+ RFTRS+LL+QG FAAFL+A P +RA LLE +TGTE Sbjct: 120 NGEVLESALSKTSSAVSDLTGLDFDRFTRSVLLAQGGFAAFLDASPGDRAPLLERITGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 I+ +IS V E+ + L+ L+ + + P + + L L + +++ + + Sbjct: 180 IFSRISIAVHERKRKEEEVLKDLKNRLASEVEDGPSG-EEVKRDLDGLEIDIERISSDLK 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + + + L ++ L+ E + + E + L L + A+ L +ER++ Sbjct: 239 EMESRIGSLRERERLESEIKNIELLIADLEEERLSRKIDLGRLERYRSAQTLAAPYERLS 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 LA + + E++ ++S + + + + + S+++++ + ++ + + Sbjct: 299 SIRERLAELDSSLLEIDRSIESAFSEVRARKEESERLSSDIREMEIERERFIPIWRKAKD 358 Query: 361 WNNEPAGWRAQFSQQTSDREH----LRQWQQQLTHAEQKLNALAAITLTLT--------- 407 ++ R+ S++ R+ L + ++++ E++L AL + Sbjct: 359 MDSHIGSLRSSLSERERARDDERKGLSKIEERILDVEKELEALEKSKKLWSLRMERMEGW 418 Query: 408 ----------ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 + + +E L L L ++V + L + ++ ++ +T E Sbjct: 419 DSLIPRLSDIEERLRRFRVLSSELESLEGRLPRLSKEVVERSSDLDRSRLELEGLTDEVE 478 Query: 458 QRNAALNEMRQRYKEK----------------TQQLADVKTICEQEARIKTLEAQRAQLQ 501 + R K + ++ + K + R L+ Sbjct: 479 SLEKSKVRQDSRLKRLLSGRPIAEWRAMEAFFRRSISLFEGESRSVELEKQIVTLRTDLR 538 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKK-------------------- 541 + + + +++ + R L EV++ Sbjct: 539 KKEADLMVLAEKAGLLDSLVESLDKRREDRARTLSMEVQRGSLVDGCPCPLCGALHHPYS 598 Query: 542 ---------LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 L EE + + +L + + R E ++ + + + + S+ Sbjct: 599 SKVPGFDDGLDEEWRSRKAELSRLRDEKIRLETTVETSSDQLKGMELERSELLRSIESER 658 Query: 593 QPL--DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 L L + + L + + + ++ + + ++E + + Sbjct: 659 SALMSSAKSLSLSIPSDEGKSLLEKRRLEKRLKLLDRISEIRDEKRGRLENLRSSIGEKE 718 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT----------------ALQNRIQQL 694 E E+ L +++ + + L+ I + Sbjct: 719 RAVHRIELSLSELENSLRVAREKKSRLVGDLSSIKISLEADLSPVGLDIGDDLETEISEG 778 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK----- 749 E + +S + +T +L + R++ + +L ++ + + + + + K Sbjct: 779 ALEFEKVSRSLDSLLDSQTELLADKRELEAERSSLSNRLKVISEGIKEREEEIAKRLVER 838 Query: 750 ----------AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A+ FD L+ + ++ + E+ L + + N+ + + Sbjct: 839 KTLFPGNPDVAEEDFDARLKELSSELERVKRFLAVSERQLDSYRESRGNISKEAASMKLE 898 Query: 800 VTQTAETLAQH--------------QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTS 845 + + DD L++ +E + L + + Sbjct: 899 LASAEVAFGELCRKAGLSGEPDFVASFRDQDDMEELSLWMEDWRNRKNTAETNLADRKSR 958 Query: 846 QGEI--------------------------------RQQLKQDADNRQQQQTLMQQIAQM 873 + I +L + + + + L ++ + Sbjct: 959 KASIGEFDGEDLRSVEAKAEALRSERDLKLAEKGRLNAELDRIEEMEKSRSELKSRLKEQ 1018 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 VE W L+ LIGS +G +FR FAQG+ L+ LAN +L R+ RY+L K E +E Sbjct: 1019 VSNVELWRGLHGLIGSADGKRFRSFAQGIAFKTLISLANGELRRMTDRYVLLPKEDEPME 1078 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 + V D +QA +R TR LSGGE FLVSL+LAL LSD+ S K R+DSLFLDEGFGTLD Sbjct: 1079 LLVKDFYQAGEIRSTRNLSGGERFLVSLSLALGLSDMSSRKVRVDSLFLDEGFGTLDEAA 1138 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 LD AL+AL L GK IGVISHV A++ERI +I+V+ +G G S+L ++ Sbjct: 1139 LDQALEALSELRRGGKLIGVISHVSAIRERIGARIRVEP-SGGGRSRLSGPGVLR 1192 >UniRef50_B8I3W3 SMC domain protein n=2 Tax=Clostridium RepID=B8I3W3_CLOCE Length = 1049 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 205/1073 (19%), Positives = 394/1073 (36%), Gaps = 60/1073 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + G+ IDFT +F I+GPTGAGKTT+ DAI AL+ E Sbjct: 1 MKPLKLTISAFGPYAGKQFIDFTTLT---EQIFVISGPTGAGKTTIFDAISFALFGEASG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S S E E+EFE+KG+ Y+ + + + G R A Sbjct: 58 SSRDRDSLRSDFAEPDTETFVELEFELKGKIYKIRRMPQQQQRKLRGEGYTLRNADAELL 117 Query: 121 -DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 L K+ + E L G+D +F + ++L QG+F L + +R + ++ GT Sbjct: 118 MPNGTLITKIVNVDERINQLLGIDKSQFKQIVMLPQGEFRKLLESDSSDREVIFRKIFGT 177 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQA------------SGVTLLTPEQVQSLTASLQV 227 E + +I + + S + L+ Q + + + +L + Sbjct: 178 EDFAEIQKRIDDDRASLEKSVHDLKTQINTHISHFDVGEDQTLVDMRNSKNINLEQFIYS 237 Query: 228 LTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ 287 + ++ + + + L + + +E + + + L++ E+ + Q AL Sbjct: 238 VERLLQKDKSIIDEIKAELTETIKAQGMLKEEITKCTEVNRKLSDREQTKQQYEALLSKG 297 Query: 288 PARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQS 347 + + A + ++ + +Q +V L+ R K++ E + +S Sbjct: 298 NEYSQKEKNLEYARKALPISEVDEQCRKVKQTLEVKAGELELARQELEKRTCEFKSIAES 357 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT 407 LNT+ ++ E A + + L+ Q I L Sbjct: 358 LNTYKDLEPENKKNETELALLEKMLPKVIEYEKGLKHLNAARAEYTQLTGEFERIQRELE 417 Query: 408 ADEVATALAQHAEQR--PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 +++ + + ++L QI +K L +L I+ + + +L Sbjct: 418 TNKIKESQQAETLKLIYTTEAECISLEKQISENRKLLIELDG-IRKLMGICQEEQNSLEN 476 Query: 466 MRQRYKEKTQQLADVK---TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 R + + D + + E L+ PCP+CG+ HP + Sbjct: 477 KRAEFASFEKNFCDFRSRLEVMEDNYIRGQAGILAGTLKENTPCPVCGAYDHPKPAEMPS 536 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL--TQQ 580 P Q ++ + E KL E + + ++ E + + Sbjct: 537 SIPS--QEQIRDSKAEFSKLTELRTEKSKAISELNGSVESKYKEIIIRLKALDDIIKIDN 594 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 + + S +++ + + E G+ A+ ++ Q + +++ Sbjct: 595 YAELVGSGRFETVLGQINATGTGLKEKTVELKAQYNSKKEFTGKKDAYEKEQTQIRDKVK 654 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 +++ + + L + + Q + E++ +L +E Sbjct: 655 IQEESVQKMTAQ----------KTGILESITKFQTEAQVIEKEISEDIRSASKLKARIEE 704 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 E + + E + + + + + + L + Sbjct: 705 QKTKIADFQKEYNQLKKLHESSREAVSNAEKEVAVRVSSVDESREEITRQERLLKEKLAS 764 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 S F D + FL +Q + L+Q + L E ++ Sbjct: 765 SKFGDYEQFLRMKKTQQEIDILQQEITMYYRSLNSLKDLYRHLEEETKGLEKQDILL--- 821 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 + A+ Q+ + + + ++ +Q M+++ Q+ + Sbjct: 822 -------LNTRYAELEQRQQVLQEQHNLVFSRYNNNSRTIKQLTGTMEKLKQLECKYGII 874 Query: 881 GYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-------E 930 L + + F ++ D ++ AN +LTR+ G RYLL+RK + Sbjct: 875 AKLAKVAKGDNPQRITFERYVLAAYFDEIIIAANYRLTRMTGSRYLLKRKEEKGKGRAQQ 934 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 LE+EV D + A R +TLSGGE F SLALAL L+D+V S +D+LF+DEGFG Sbjct: 935 GLELEVFDNYTGKA-RHVKTLSGGEGFKASLALALGLADVVQSYSGGISLDTLFVDEGFG 993 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 +LD E+LD A++ L + +G+ +GVISHV +KERI ++V + K Sbjct: 994 SLDPESLDGAIECLTEIQKTGRLVGVISHVTEIKERINSVLEVISSKEGSFIK 1046 >UniRef50_A0LM48 SMC domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM48_SYNFM Length = 1020 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 217/1071 (20%), Positives = 395/1071 (36%), Gaps = 85/1071 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L E DF F I GPTG+GK+TLLDA+C ALY ET Sbjct: 1 MRPLKLTLSAFGPYASEQVFDFR--VLGDRSFFLIHGPTGSGKSTLLDAVCFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV------ 114 + R + +F + YR S + R + G V + Sbjct: 59 GERDVRHLRSDYARASTPTRVTFDFSLGEAVYRITRSPEQERPRARGEGTVVQRPAAVLH 118 Query: 115 ----ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 + +G +LA + + L G +F + ++L QGQF FL A +ER Sbjct: 119 DRTGLVDESREGALLAGQWTRVTDRMEQLLGFKSSQFRQVVMLPQGQFRKFLTADSRERQ 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEK--------LQAQASGVTLLTPEQVQSLT 222 +LE L TEIY +I V E + + LE L+ A E ++ Sbjct: 179 AILEVLFQTEIYRRIEEAVKEAAREIQHALEDLGKRRRLILEQAAVESERQLAEAMEGFA 238 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 A L+ L + + L ++ +++N + EA+R Q + + + + Sbjct: 239 ARLEALGGQVEALKKSEALANEAVNKGREIRRILDEAARAQAEFAALEKRKPEIEDRRVK 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 L A+ A LR +A ++ ++ A R + A + Sbjct: 299 LDRARKAAGLRGVEANLAAREKEFGDASVRVRTAEIEIEKARAARQAAEAALAGEREREG 358 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 +++ + +Q Q E R+ + E + + + A ++ A Sbjct: 359 EREAARRDVVQLTAMIDQV-RELEAARSDLGGMKARVERVERLRGLRAAALERCRIEMAE 417 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + A A+ + +RQ + I RL + + + + AA Sbjct: 418 AGAALEETEAQAVHAERYRLEVRQAAASYRATI-----RLKTSEKHLALALAHRKKTEAA 472 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 + L E+E +L G PCP+CG+T HP+ + Sbjct: 473 AGTALAVLTDARTALDG----MEREWLEGQAAILAGRLADGLPCPVCGATDHPSPARHGG 528 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 P E KK L + + + +R E +L+ L + Sbjct: 529 ELPT---------EAAHKKARTHARELESRYEKARLESERANLEVAALQSAAANLRAEAG 579 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 V A D DA + +Q + + A ++ ++++ + Sbjct: 580 EVPA-----EGFRDLKTRLRDAWARFRTAVAARAQVTDRAVALKAVEERTAGNEKRLRRL 634 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L + E E + R ++ ++ ++ ++ Q R++ L E Sbjct: 635 ENGLRAAVRRMDGQAAVMAEREGKVPDRLRDLKALERA---ISTAQKRLRSLLDAQEAAR 691 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 E E R E + + + + + L Sbjct: 692 ARQEAAAARAAACEETLRNAVEALESAKERAGSC--------------REELRLRLAEEG 737 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F + + AA +D + + ++E+ + + R A+ + + + T Sbjct: 738 FSSVEDYRAAKLDRKDVDRMEREIADFHGRHRAARERLDRAVAAAQGLE----------T 787 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E+++++ + + LR G +R Q Q A L ++ + G Sbjct: 788 PVLEELERKAREASEALRSAIARHGALRAQSDQLARWNADLHKLAGEMEAAQNRYGIVGR 847 Query: 883 LNSLIGSKE--GDKFRKFAQGLTLDNLVHLAN-QQLTRLHGRYLLQR-------KASEAL 932 ++ + K G F++F LD+++ A+ + GR+ LQR +A+ L Sbjct: 848 ISEVANGKNAPGLTFQRFVLAALLDDVLDAASRRLRRMSRGRFDLQRSRERGDQRAAAGL 907 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 ++ V DT+ R TLSGGESFL SLA+AL L+D+V + R++++F+DEGFG+L Sbjct: 908 DLAVYDTYTG-TTRPVNTLSGGESFLSSLAMALGLADVVRAYAGGIRLETIFVDEGFGSL 966 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 D E+LD A L L + +G+ISHV ++ER+ +++V ++ Sbjct: 967 DQESLDLAFQTLVDLQEGNRLVGIISHVPELRERVDARLEVIPGIRGSDAR 1017 >UniRef50_UPI00016C0A34 ATPase involved in DNA repair n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A34 Length = 1019 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 194/1068 (18%), Positives = 372/1068 (34%), Gaps = 81/1068 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + + + +IDF + +F I+GPTGAGKT + DAI ALY E Sbjct: 1 MRPIKLVMSAFGPFREQVEIDFNG--LKNKNIFMISGPTGAGKTVIFDAISFALYGEGSG 58 Query: 61 LSNV-SQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + + T + EFE+ Y+ + + + Sbjct: 59 NNRKNEELLISDYTTNGILTFVNFEFEINKTNYKLIRYPEQ---------KNTEKKCVLY 109 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + + + E + GL +F + ++L QG+F FL KE+ E+ ++ GT Sbjct: 110 IENEQPITDILTVTEKIEEILGLSKDQFKQIVMLPQGEFNKFLTTNTKEKIEIFRKIFGT 169 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGV---------TLLTPEQVQSLTASLQVLTD 230 +++ I + E + L + + + T ++ LQ + + Sbjct: 170 QLHHAIQEDFKNRASQLEQEYKFLNTRITELITTLAFPDYITDTAIAIEYAHEYLQTIAN 229 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 E Q ++Q + L L + L Q ++ L Q E K Q + + + Sbjct: 230 ETIQRQACKEQAEDQLQTLYAEQSLIQNNNQLLLKLSQVNQELIKLQNKKVEMEQLELKI 289 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 N + + + + + L + ++ + Q Sbjct: 290 NALDTIKEFSNDYIYIQKSTDEYNRMLYDL----SEYEQLKLELTIELKNTQILFDDYEL 345 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD- 409 + +HD + E + + + +E L + + EQ+ + Sbjct: 346 KVSKHDELKIKRRELEKLIPKITHSENLKEKLNKLTTLINEKEQQKTTITTKFEENKNQI 405 Query: 410 -EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 ++ L + + AL Q + + L L ++ + M Sbjct: 406 TQINETLKSFSYIELDKVKAEALKIQTLSKYNSLKTLYTDCKSYEAAIVEH----KNMTT 461 Query: 469 RYKEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 Y K + +KT E +I + LQ G CP+CGST+HP+ + Sbjct: 462 XYISKNKNFEKLKTDYEISEKIYYNEQAGILAMSLQNGISCPVCGSTAHPSPATVKTAIT 521 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + ++ A++ ++ E LR QL + LQ + + + Q + Sbjct: 522 IPTKIQIDAMKKTLETARIENNELRDQLIELNTNLQVMLSNIELQLFLLKEPKYSNQTLN 581 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 ++ ++ D Q + + Q+ QY +++ Q Sbjct: 582 TIYDLVHSTHNECLEIDKTLDLLNTQ---MIEVKNKTLQLQTLTTHFTQYDKELITINQT 638 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L + + + ++ Q +L ++ + + E ++ Sbjct: 639 LQQMAIKKTKIQTELNLLLN-----SDVPIFLEELQTKLDSINILLTTEQQLYEEYKENF 693 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + + + ++ L S+ + + ++ F+T L F D Sbjct: 694 TNITKQILTLDTQIQSQNDYLTTLKSKIDSQHEHLSKNLAEHHISEDIFETLLPELSFKD 753 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 L Q L E Q + D L + Sbjct: 754 M------------------WVTRLNQYTSQYTELSATAQELTKQLENITYMDLKVLVKKI 795 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + + Q++ + + + L + + + L ++ + + Sbjct: 796 HKGEYLKKYLDQQITDLIKDETSKKLLLSELESLHDKFKQL-------EKKYKLISEIGD 848 Query: 886 LIGSKEG--DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVE 935 + K + F G + ++ AN +L +L R+ L R + ++ LE+ Sbjct: 849 IANGKNSFYISYETFVIGTYFEEIIDAANIRLKQLTANRFTLNRQKEIVKGRNNQGLELT 908 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + + RD TLSGGESF SL+LAL LSD++ S ++D +F+DEGFGTLDSE Sbjct: 909 VFDKYT-HSTRDATTLSGGESFQASLSLALGLSDVIQTKSKGIKLDMMFIDEGFGTLDSE 967 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 TL A+D L L + IG+ISHVE +K +I Q++V N K Sbjct: 968 TLGVAVDTLMELKQDERLIGIISHVEELKNKISTQLEVIPTNNGSSVK 1015 >UniRef50_C5RHS7 SMC domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RHS7_CLOCL Length = 1047 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 217/1091 (19%), Positives = 428/1091 (39%), Gaps = 93/1091 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L G +IDFT +F +TGPTG+GKTT+ DAIC ALY ET Sbjct: 1 MRPVKLVLSAFGPYSGVTEIDFT--LLGDKNIFLVTGPTGSGKTTIFDAICYALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAE--CLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVE 115 + + E F VKGE Y + R + G +Q +E Sbjct: 59 NMRSGKELRSDFIDEKENHLTYVEFIFNVKGEDYYIKRVPQQMRKKLSGSGETMQNATIE 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 L + A + K D + + G++ +F + +++ QG F FL A KE+ +L + Sbjct: 119 LRKLAKDEKPLTKDGDVKKSIDEIMGINAEQFRKIIMIPQGDFRDFLCASTKEKETILRK 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKL-------------------------QAQASGV 210 + TE + +I + R + +L +A + Sbjct: 179 IFNTEPFKRIQDKLALGETKIRNTVNELTLGLRETFSLVDCGDNNNLKNLIINRATTGEI 238 Query: 211 TLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL 270 L EQ+ L ++L ++++ + +N + ++ + ++ L + Sbjct: 239 VDLLKEQLLKDINEENKLKLSIEELDKVKEEKLKVINEIIETNKKFDQKEEIKKLLTGLM 298 Query: 271 AEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 ++ + + L A+ L P + E + Q+ N + Q + Sbjct: 299 NKKSEIIEKEKLLDSGIKAQKLLPFEKSYIERKQE----QAQVMLANEKGQKDLDDAKVR 354 Query: 331 RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 A ++ ++ + + + + + +W E + + L +++ QL Sbjct: 355 FLRAEEELKGIENLKSATDEKKESFVKLTEWLKEVELLEEKKNAINKSSSVLERYRTQLK 414 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQR-----PLRQHLVALHGQIVPQQKRLAQL 445 + ++ + ++ I TL E + Q+ + L G++ K + + Sbjct: 415 NEKENIISIEGIIETLLRKEKFIDENKLQHQKIIFKYKEMEENHKLLGELYKLSKFIVEN 474 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + ++ + + L + ++ Y+EK + + +I +L G+P Sbjct: 475 KQVVKESSDKLKALEENLVKDKRVYEEKNDFIINSSSIL-----------LARELVEGEP 523 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CP+CGS HP+ + P + + AL +E+ K + L ++ + ++ Sbjct: 524 CPVCGSKEHPSPRLVKGDIP--TKEEMRALTSEIDKKQRDIIGLSAVINELQGKIFASME 581 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQI 625 + + + + + I P +++ QLR + ++ Sbjct: 582 TLKQKNNELI-----VRKLLVEGLDIYDYDNVIAPVGKNIAKNKEQLRAQKE------EL 630 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELT 685 + ++I++ + LL E S LA E ++ Q + Sbjct: 631 EKEIDKSKHLTEEIDKNKGLLKGAKEKETKLNDLILEVSSKLAK---EQEALQGIYLRVP 687 Query: 686 ALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQ 745 + I L+ +E L + + + + S ++ L++ +A Sbjct: 688 KEYHEITSLSKAIEILDKEIKNNEILMEKLQNQYNDCKTYLEKAISTKEILEKNLEVATS 747 Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 L+ QF+ L F++ + + A + +LE + + + + + Sbjct: 748 QLENTYKQFEIELLKL-FENAEEYKLASGTINEIERLELEIREYNDAIKLNNDIYMNLEK 806 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 L + A V V +++E+ ++ + T + I +LK++ D Sbjct: 807 ELGE----------AKKVDVTVLEEEINMIKGQIEDMRTMRDGISSRLKRNRDILNSALE 856 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RY 922 + I ++ + G L +L K +K F F G D+++ AN +L ++ G R+ Sbjct: 857 KTEAIRTKEEEYKILGELANLALGKGAEKVTFETFVLGNYFDDVIASANIRLMKMTGGRF 916 Query: 923 LLQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---S 972 L R+ E L++++ D + A R TLSGGESF +LALAL LSD V S Sbjct: 917 YLVRREEEGSSRGRKGLDLDIFDNYTGKA-RPVNTLSGGESFKAALALALGLSDEVQNNS 975 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 ++++F+DEGFGTLDSE+LD A+ L L SG+ +G+ISHV+ +KERI Q+++K Sbjct: 976 GGIELNTMFIDEGFGTLDSESLDNAIRCLLDLEKSGRLVGIISHVDDLKERITSQLQIKV 1035 Query: 1033 INGLGYSKLES 1043 ++ + Sbjct: 1036 NAKGSSAEFKV 1046 >UniRef50_Q2FM95 Exonuclease SbcC n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FM95_METHJ Length = 1219 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 297/1214 (24%), Positives = 519/1214 (42%), Gaps = 183/1214 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L+ NLNSL G+W IDF+ F S+G+F ITGPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MKILQLKFSNLNSLAGDWTIDFSNPAFTSSGIFLITGPTGSGKTTVLDAICLALYGKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+++ N +MTR T EC AEV FE + + W+Q RA+N+PDG LQ P+ E++R Sbjct: 61 LGKVTKTNNHIMTRHTGECSAEVVFESQKGRFVCHWNQRRAKNKPDGELQPPQHEISRAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +ILA K+ E+ +TG+DY +FTRS+LL+QG FAAFL A ERA +LE++TGT Sbjct: 121 TKEILASKINQVQEIVKEVTGMDYDQFTRSILLAQGGFAAFLQAGADERAPILEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEK------------------LQAQASGVTLLTP------- 215 IY ++S +E++ S R +LE+ ++ Q + Sbjct: 181 IYSKLSEKTYERYTSEREKLEQVTRECDLISILSPEEKESIEQQIEELRKAAAGKDVMII 240 Query: 216 ---------EQVQSLTASLQVLTDEEKQLITAQQQ-----------------------EQ 243 E ++ L + + L + K L + + Sbjct: 241 RTNEAIQWIETLEKLRSEIDGLETDAKHLDEKKAAFEPSRIALLAAQKAASFQGLYAPLE 300 Query: 244 QSLNWLTRQDELQQEASRRQQALQQ---------ALAEEEKAQPQLAALSLAQPARNLRP 294 L + +E +R + +L+ A+ E Q + +R Sbjct: 301 LKRETLQKDTRQYEETARMRDSLKASLPDVESLVLSAKTEMDQAEREREEGYVLINEIRT 360 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ---------- 344 ++I E + L +++++ + L + + E Sbjct: 361 LDKQIREKESELYKKKEELKGLQDLLAGYTSEQELAEKKQQTILREKSDAARYIDQNARD 420 Query: 345 ----------QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL----RQWQQQLT 390 ++ ++ L E + N + + + + D E L + QQ L Sbjct: 421 AVIRDIYSGTEEKIHQILNEMKTIGRLNKDCSEQKRLVHSKRQDLEDLKKDREKKQQALQ 480 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 E + + + L Q + + +R + +I+ ++ ++ + A+ Sbjct: 481 VLEDQQKIREGELEKILSGTTIGELRQRRDDKKVRIEHLNRLKEILTGKREISANKEALS 540 Query: 451 NVTQEQTQRNA----ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 + + K + + L +T A+++ L +R QL G+PC Sbjct: 541 LKRDDLIHYLQSSGYEKERLGSDLKHREELLTTKRTAAFLAAKVRDLATERNQLVDGEPC 600 Query: 507 PLCGST--------------------SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEG 546 PLCGS E + + E E+K+ E+ Sbjct: 601 PLCGSLHHPFVTEQEIKPDEIISDFVEEEKKIKDLTRELTSLTAIIAEKEGELKRCTEDI 660 Query: 547 ATLRGQLDAITKQLQR--------DENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 QL+ + + + E + ++L ++ + ++ A+L Q + I Sbjct: 661 TECDAQLNELNRAWKEGAELHGIHAETDERTLESCIKSAASELGSLEATLRTAEQYDEQI 720 Query: 599 QPWLDAQ-DEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT-------L 650 + E + L E + +I + +I + Q+ I + + T+ L Sbjct: 721 KKASPLISTNRETLISLEKNYREKEFEIISGETRIGEIQELIAASESKISTSFLELQPVL 780 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL------------ 698 ++ Q+ + L T + + +Q++++ + + + +Q+L L Sbjct: 781 ADLGCSINQDTNMPALLLTLKNRQKRFQEQEDRIKSCEVGLQELHAKLSGLIARISEKTN 840 Query: 699 ------------------------------------ETLPQSDELPHCEETVVLENWRQV 722 + L ++ + + + Sbjct: 841 EITRTHEAIKEKELTLHALKNERNNKFGEKDTDCEEKRLAEAVKKASEIFETRQKEKNDL 900 Query: 723 HEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQL 782 + +L L+++ A Q + + +F + ++ + F D++A+ +ALM ++ + +L Sbjct: 901 SNRLQSLEGLLSDLEKRISEAQQDISSSLDEFLSHIRQAGFQDEEAYTSALMKQEEMVRL 960 Query: 783 EQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLREN 842 E++ +++ + + + + Q+ AL ++ +L + ++ Sbjct: 961 EKVWEDIRTEETRIRERKISAETRYVEEQKKNLTTKPAL-----DLKADLEELQKQKDLY 1015 Query: 843 TTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGL 902 G+ +++L + + +QQ+ + ++V W LN LIGS +G KFR FAQGL Sbjct: 1016 IADIGKNQEKLIRHEEMVRQQREKIAIRDARQREVNKWHRLNELIGSADGKKFRVFAQGL 1075 Query: 903 TLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLA 962 T L+ ANQ L R+ RY+L + L+++V+DTWQ VR + LSGGE F+VSLA Sbjct: 1076 TFCILLSHANQHLQRMTDRYILIQDKDLPLDMQVIDTWQGGVVRSVKNLSGGEIFMVSLA 1135 Query: 963 LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 LAL LS + S R+DSLFLDEGFGTLD + L+TAL L L GK IGVISHV A+KE Sbjct: 1136 LALGLSHMASQNVRVDSLFLDEGFGTLDDDALETALSTLSGLEQEGKLIGVISHVSALKE 1195 Query: 1023 RIPVQIKVKKINGL 1036 RIPV+I ++K + Sbjct: 1196 RIPVRISIEKGSNG 1209 >UniRef50_Q73RB9 Nuclease SbcCD, C subunit, putative n=1 Tax=Treponema denticola RepID=Q73RB9_TREDE Length = 1030 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 190/1061 (17%), Positives = 404/1061 (38%), Gaps = 49/1061 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L N+ +G IDF+ + +F + G TGAGKTT+ DAI A Y + Sbjct: 1 MKPEILKLTNIGPFRGTHTIDFSLM----DSIFLVCGKTGAGKTTIFDAISYAFYSKPLG 56 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + +++S + E+ F + YR F R Sbjct: 57 SRSQITRSLRSQFAPEEETAEVELVFTMGPAKYRIFRRLPFLRPGKKNETPEESALAQWD 116 Query: 120 AD--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + + +D + + L+ F R +LL QG+FAAFL ++ E LEEL Sbjct: 117 GKTWKDLSSTNKRDTDKKILNIINLNEKEFARIVLLPQGEFAAFLRENSSQKKETLEELF 176 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 Y +I + E+ K+ +++ Q + S + + E + + Sbjct: 177 PISRYTKIMENLKEREKAESYKIKNTQDALEALGKEFD--ADSYPSKKEGFEKEIELIKK 234 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + + + + E + +++ L E + L + A Sbjct: 235 NYNKISKKIEEKISEKEQAKVLKEKKEELVTIKTRLENLNAHKEEIGLMEEAVEKARRAA 294 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH---HAAKQSAELQQQQQSLNTWLQE 354 +A + +++ ++ I E T ++ + ++ Q E++ ++++ Q Sbjct: 295 SLAALADSVSKLKNNIAEYKTDIEKKIKDLNAVTQVLDSLKAQEKEIEAEKENNTALKQS 354 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 DR ++ + ++ ++ ++L E+ + L E+ + Sbjct: 355 LDRLKRAAEVYKEIEERSYEKKGLSLQKKENTEKLAQTEKNIQELKDKVSEYL--EIISE 412 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 L E ++ ++ + + + L + + + + Sbjct: 413 LDNRKEMAETSTQKLSYLKRLFDIAVKKEKASKLYTTHKAAAEKNYNDLQLILKDIEIEK 472 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 + +K + A L+ G+PCP+CGS HP+ ++ Sbjct: 473 ELFEKLKKEKKDLEINAEASALAVHLKDGEPCPVCGSIHHPSPAVENTESIFSLDEKIQK 532 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 E ++K + +L L A K + + L + L ++++ + Sbjct: 533 CERSIEKFNLDKDSLSNSLTARNKDADWHKEQLAELDRSFFNLNEEFKNTSFIFEEMP-- 590 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 ++ E L + E + Q + +EQ+ + T Sbjct: 591 ---------SEKTIEDLLPQAGKEAEKDSLLFKEAQTANTAKINLEQKLSSIQTQKEALT 641 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 L +ES L T E + + + + + +E + + + Sbjct: 642 DALTNIKIKESELNTILHEKKKQYDDAFKSIPSDIQKENIDDTIEGCNEMIFASDRKISG 701 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 E ++ +++ ++ + Q+Q +SL + + + + F + L +++ Sbjct: 702 YEEKLKENNDRHTSIKAGLIQRQEQLAKWEKSLLEEEENLKDSFERKGFSSLKELLDSIL 761 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 E+ ++ E+ + ++ + + + +P E+I+ E+ Sbjct: 762 PEEKISDFEETITKFKEEKITLEHSAAGLKKDIEGKTFIQP----------EKIEDEIII 811 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE--G 892 + L E EI+ L + D +++Q+L++++ Q ++ + L+ + Sbjct: 812 LQKNLDEEQDRLAEIKSSLDKLKDLFERRQSLLKELKQRAEEAQLITELSLSLNGSNKYK 871 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS------EALEVEVVDTWQADAV 945 KF + L ++ AN +L R+ GRY+L+ L++E+ D + + Sbjct: 872 LKFNIWMLSAFLREIIVYANTRLERMSGGRYVLKLSKELSGNNLSGLDMEIYDAYTGG-I 930 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R T +LSGGE+F+VS++LAL L+D + S R+DS+F+DEGFG+LD +L+ A+ LD Sbjct: 931 RPTASLSGGETFMVSISLALGLADSIQTRSGGIRLDSMFIDEGFGSLDEASLENAISILD 990 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 + + +G+ISHV +K RIP +I+++K + K+ Sbjct: 991 EVR-GNRMVGIISHVSELKTRIPQKIEIEKNSNGSTIKIRG 1030 >UniRef50_B9Z3W6 SMC domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z3W6_9NEIS Length = 1140 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 431/1144 (37%), Positives = 597/1144 (52%), Gaps = 107/1144 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEWKIDFT+ PF +NGLFAITGPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKILTLRLKNLNSLKGEWKIDFTQPPFKNNGLFAITGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++M+R TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELA Sbjct: 61 LKTISASSNEIMSRHTADCLAEVEFEVKGQVYRAFWSQRRARDKADGALQAPKVELAD-G 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G IL ++ DKL+ +TGLD+ RFT+SM+L+QG FAAFLNA ERAELLEELTGT+ Sbjct: 120 AGNILTSQINDKLKRIEAITGLDFARFTKSMMLAQGGFAAFLNASANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFEQ + A+ L++L+A+A GV LL E+ Q++ + LT + L Q+ Sbjct: 180 IYGQISQRVFEQARDAKQALDQLRAKADGVELLPEERRQAMQEQIGELTQQLTALHAEQE 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q + W + + + Q A Q A +A+P+L L + PA +RP + Sbjct: 240 QTRALRQWRYEVGQAELAEEQAQSAAQAAQDALRQAEPELQRLQRSDPAEAVRPVYLAWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMAL-----------RASIRHHAAKQSAELQQQQQSLN 349 + A R +E V +L ++ + ++ +Q + Q+ Sbjct: 300 DEMARQGQTRSALERVQEQLAASRQQSVSAHWQATTIAEGLAAREQQRGQAVQDELQASQ 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFS---------------------QQTSDREHLRQWQQQ 388 WL H F + +GW++++ + L + Q Sbjct: 360 AWLARHAHFAGLGEKLSGWQSEYGQIQQAQQAVQQLQTQQQAQQGELADIETRLARQVQA 419 Query: 389 LTHAEQKLNALAAITLTLTADEVATAL-----------AQHAEQRPLRQHLVALHGQIVP 437 L A + T A + EQ + L Q+ Sbjct: 420 LQQATARHEQSRQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQLAQQATQLRQ 479 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + Q + ++ + Q+ ++ L+ +R+ Y++ +Q+ D + + QE RI++LEA R Sbjct: 480 LAAQRVQQETSLADTHQQLAEQQTGLDALRRDYRQLKEQVDDKRKLLLQEQRIQSLEAHR 539 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G+ CPLCGS HP +++YQ L+ + L E +++L E G +GQL ++T Sbjct: 540 AALQPGEACPLCGSHEHPGIQSYQQLDSSATERALQDKEAALQRLEETGNAAKGQLASLT 599 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL---QPLDDIQPWLDAQDEHERQLRL 614 + ++ + +L Q Q +W A A L ++ Q +Q L ++ E L+ Sbjct: 600 GRQEQQQQSLAALAQSLQLAQAEWNARAAPLGLSDNEWQHESSLQQGLTTAEQQEAALKT 659 Query: 615 LSQRHELQGQI----------------------AAHNQQIIQYQQQIEQRQQLLLTTLTG 652 Q+ E Q Q +++ + QQ Sbjct: 660 TLQQAETAQQRLAEAQQQEAQSAAQRQEAAQQHELLQQSQAHAAKRLAELQQQRDVASRA 719 Query: 653 YALTLPQEDEEES------------WLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 + + WLA RQQ+ Q+WQ +Q E + + + E Sbjct: 720 AQQASERLLAAIAAAGFTVANDMAHWLAERQQDWQTWQAKQREQQQQEAELLKQQARSEQ 779 Query: 701 LPQSDE---------------------LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 + + E + Q +L Q L+ Sbjct: 780 AAKLAQVWQARWRKLGVEAPCHRADGVTDEAALARCAERVEALSAQIASLQGQHAQLEAD 839 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 + A+ + AL AS F D AF AL+ + +L+ L+Q L+ Q + Sbjct: 840 LHAQQRQGVDAETAWLAALAASPFADGDAFRQALLPGEERQRLQTLRQQLQQAVEHRQAV 899 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + TL QQ + + ++ LA + + ++ QG ++ L DA Sbjct: 900 LHTATATLLALQQQ-----ARTPLALAELDAALATLDAQRQALSSQQGALQALLNDDALR 954 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH 919 RQ QQ L QQI Q V+ W LNSLIGSKEGDKFRKFAQGLTLD+L+HLAN+ L RLH Sbjct: 955 RQGQQALFQQIEQQAADVDIWQRLNSLIGSKEGDKFRKFAQGLTLDHLMHLANRHLERLH 1014 Query: 920 GRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDS 979 GRYLLQRK + LE+E+VDTWQAD RDTRTLSGGESFLVSLALALALSDLVSHKT IDS Sbjct: 1015 GRYLLQRKPTGELELEIVDTWQADVTRDTRTLSGGESFLVSLALALALSDLVSHKTSIDS 1074 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 LFLDEGFGTLD ETL+ ALDALDA+N+SGK+IGVISHV M+ERI VQI ++K +GLG S Sbjct: 1075 LFLDEGFGTLDGETLEVALDALDAINSSGKSIGVISHVAGMQERIAVQIVIRKASGLGAS 1134 Query: 1040 KLES 1043 ++E Sbjct: 1135 RIEI 1138 >UniRef50_C8QYK7 SMC domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYK7_9DELT Length = 1087 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 324/1085 (29%), Positives = 499/1085 (45%), Gaps = 54/1085 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LRLKNLNSL GEW+ID T +AS+G+FAITGPTGAGK+T+LDA+CLALY TPR Sbjct: 1 MQIRQLRLKNLNSLVGEWEIDLTHPDYASSGIFAITGPTGAGKSTILDALCLALYGTTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q+ N++M+R T EC AE F YR WSQ+RAR +PDG LQ P+ ELA Sbjct: 61 LGKITQADNEIMSRQTGECFAEATFVTAAGRYRCHWSQHRARRKPDGKLQAPKHELAEAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ K + E T+TG+D+ RFTRSMLL+QG FAAFL A P +RA +LE++TGT Sbjct: 121 SGRIMESKQRGVAEQIETVTGMDFDRFTRSMLLAQGGFAAFLQADPDQRAPILEQITGTG 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V ++ + + +LE L+ Q +G+ LL E+ + L L + EK+L Sbjct: 181 IYSLISIKVHQRRGAEQRQLENLERQLTGIRLLPQEEEEQLQKELTAGQEREKELAEQIG 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++ WL L QE ++ + ++ + PQ L A A L +A Sbjct: 241 VGNRAIGWLDNLARLAQELAQNSRRQEELQQRRQAFAPQFTKLQRANQALELAGAHAALA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A R E L + A ++ + + Q+++ +L + R+ Sbjct: 301 ALRQAQQADRDNRESCRRALPALEAGCHQAQNELEQAEQQRQERKNNLQAAQPLLRQARE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD---------EV 411 + + T E L++ +L ++ T + Sbjct: 361 LDLQLRELAKPLKTTTEAIEELQRRLCELAEDQKSTELKQQTANTKLQEVDRELTDTAAD 420 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 + A L + ++RL + Q Q Q ++ + + R+ + Sbjct: 421 QQLVEHLAAIEERFSDFAELSRRRQEHRQRLDEAQKRQQAAEQTWQRQQQQVQKNRRDLQ 480 Query: 472 EKTQQLADVKTICEQEARIKTL---------------------------EAQRAQLQAGQ 504 + Q+LA +Q K L E R QL+ + Sbjct: 481 QAEQELASKGEKLQQLLAGKELTAWRRELLTLKEAAVRRERFLESTHSMEQARGQLRPQE 540 Query: 505 PCPLCGSTSHPA----------VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLD 554 PCPLCGS SHP LE +++ E A + L+ Sbjct: 541 PCPLCGSRSHPFANGEIPDPDPQATAACERVTKLVDTAEELEKALQRQREAMAGCKDALN 600 Query: 555 AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL 614 ++ Q + + +Q L ++ + + SL Q D + + E Sbjct: 601 RRERESQSARYQLDNAQQTVTRLLEELRDLETSLQ---QQRDRLLARIAPYGIKELTPTT 657 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEA 674 Q + Q Q + + Q+ L A Q E +Q+ Sbjct: 658 WEQARRRLTERRDRWQTRQQEKNDLTQQLAGLKLRGEHLAEQHRQVLAERHKQQEHEQQL 717 Query: 675 QSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQ 734 Q +++ ++ Q + L + E + + + ++ + ++ + Sbjct: 718 QQQRRQLSQKRQQLLGEQDPEREEQRLQHALEAAEKQVELARQALATARQEQEKVQTRSR 777 Query: 735 TLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRR 794 L Q A+ L +++A+F L A+ F D+ +LAA + E +L++ Q L ++ Sbjct: 778 ELAQAIDQRAKLLAQSEAEFKKRLAAADFADEAEYLAANLPEDQRRRLQRQAQQLADEEA 837 Query: 795 QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLK 854 + + L + Q + T E++Q +LA ++ R G ++Q+L+ Sbjct: 838 ALSAGHQEKSRQLQELQAQQI-----TTADKEELQAQLATLEEQRRTVQEQIGALKQKLE 892 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 + R+QQ+ +Q + Q+ W L+ LIGS +G KFR FAQGLT + +V AN Q Sbjct: 893 DNRQLRRQQEQQVQLLEAQRQECARWELLHELIGSADGKKFRNFAQGLTFEVMVGQANHQ 952 Query: 915 LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK 974 L ++ RYLL R + LE+ VVD +QA +R TR LSGGESFLVSLALAL LS + S Sbjct: 953 LKKMTDRYLLLRDPARPLELNVVDNYQAGEIRPTRNLSGGESFLVSLALALGLSRMASRN 1012 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 ++DSLFLDEGFGTLD E LD+AL+ L L GK IG+ISHV A+KERI +I+V Sbjct: 1013 VQVDSLFLDEGFGTLDDEALDSALETLAGLQQDGKLIGIISHVPALKERIATRIRVVPQT 1072 Query: 1035 GLGYS 1039 G S Sbjct: 1073 GGRSS 1077 >UniRef50_O83635 Nuclease sbcCD subunit C n=2 Tax=Treponema pallidum RepID=SBCC_TREPA Length = 1047 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 221/1070 (20%), Positives = 389/1070 (36%), Gaps = 60/1070 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L L N+ G +DFT +F + G TG+GKTTL DAI ALY + Sbjct: 1 MKPMRLTLHNIGPFVGTHTVDFTAL----GPIFLVCGKTGSGKTTLFDAIAYALYGKPLG 56 Query: 61 LSNVS-QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 +S + A +EF + + YR + Q ++ L + Sbjct: 57 TRAEVIRSLRSHYAAPSEAAFATLEFSLGTKIYRVHRTLTCT-LSHRKTEQPEQLYLEQK 115 Query: 120 ---ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 +I + + L L+ F R ++L QG+ A FL A KE+ E L L Sbjct: 116 KGHGWERIACAHKSETECVIHDLLKLNSKEFERVVMLPQGECAQFLKANSKEKKETLMNL 175 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT-----LLTPEQVQSLTASLQVLTDE 231 + Y + ++ A+ LE L++Q + E+ Q+L A LQ D Sbjct: 176 FPVDQYTALMERAKKKSLHAKAVLETLRSQLETLCAECMPDTYHERKQTLEAELQHARDA 235 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN 291 +Q + Q L Q + QQ + ++ A+E + A+ A Sbjct: 236 LQQTRISHAYYTQKREALEAQLKKQQLCKELRARIETYRAQEPVHAETQKRIDRARKAAP 295 Query: 292 LRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 L H + + + I +I+E + R Q + +++Q++ L T Sbjct: 296 LAAHIKHVTQCEQDAQRIHAEIQEKM----RSREQLLMKRAAHVAQQSSIEEQRRLLQTL 351 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 ++ R Q + +H+ QQ T Q+ +L + E Sbjct: 352 HSACIHIEDAHDVATSIRDISCQAHTLTQHIHTLAQQKTTLTQQEQSLCKEL-DILQREA 410 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 T + + L+ L +R A+L A T + + + Sbjct: 411 GTIDTRTSAFNDLQIQLAHAKKT-QELSQRYAELCAAHATCTAQCEKLEKIHAQKSAYST 469 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 +QL K + L+ +PCP+CGS HP R Sbjct: 470 RAREQLLQTKEQIHLQETRTHAVVLARLLEHQEPCPVCGSCIHPNPARQDIDNLEPLTRR 529 Query: 532 LLALENEVKKLGEEGATL-------RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 + +E +L + R + + + Q+Q ++ L + + V Sbjct: 530 MQRIEQTYAQLETSEKDVYHILTSERERRASYSAQMQEIQHSFSILTSCDTRSSCDIPNV 589 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 L + + D + L Q + + AH QQ Q + E Sbjct: 590 QKITVRVLDLTEKLSRAKDMLACAQHALLRKKQPEQDLQDVRAHLQQCSQELAKKETALH 649 Query: 645 LLLTTLTGYALTLPQEDEE--ESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 L TLT + + + LA+ Q Q + + + + ++ L Sbjct: 650 ALQETLTQQRVRIHALSIRLPKELLASNLLAPQKMQHEKESVAYWKEMLAHCQTLMRELH 709 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 E E + + A +Q++ + A+++ A+ + Sbjct: 710 THIEEYDREFNEIENASSALGADIAAREDALNHVQKEYMHLARTVCCART-------EAH 762 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F++ + AALM + L+ Q R L+ + G + Sbjct: 763 FNNNEEVTAALMTDAELSHAAAEIQFFNELRAADTHLLKTLEAEI----------GTEIP 812 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 ++++ + + + + L + + +Q+AQ TQ+ Sbjct: 813 SDLDELNAQCHTLVKDEENFLSRIEILSATLHTLTHQYLKYEECSKQLAQKTQESAKLIT 872 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EAL 932 L+ + K F +A L + AN +L ++ GRY L+ S + L Sbjct: 873 LSDELNGINQKKIQFDAWALISFLHEITAYANIRLQKMSEGRYHLRVADSHVNARGYQGL 932 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 + V D + +VR + TLSGGE+F+ S++LAL L+D + S +DSLF+DEGFG+L Sbjct: 933 ALLVADAYTG-SVRPSATLSGGETFMASISLALGLADSIQTRSGGIVLDSLFIDEGFGSL 991 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 D +LD A+ LD + + IG+ISHV ++ RIP +I +KK N + Sbjct: 992 DEASLDKAIGILDEIREGSRMIGIISHVHELRTRIPHKILIKKTNAGSHV 1041 >UniRef50_Q47ER6 SMC protein, N-terminal n=3 Tax=Betaproteobacteria RepID=Q47ER6_DECAR Length = 1155 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 444/1156 (38%), Positives = 602/1156 (52%), Gaps = 114/1156 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEW IDFT+ PF N LFAITGPTGAGK+TLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLKGEWTIDFTKAPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S + ND+MTR TA+CLAEVEFEVKG YRAFWSQ RAR++ DG LQ P+VELA Sbjct: 61 LKTISATDNDIMTRHTADCLAEVEFEVKGAVYRAFWSQRRARDKIDGALQAPKVELA-AG 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL+ + DKL+ A +TGLD+ RFT+SMLL+QG FAAFLNA ERAELLEELTGTE Sbjct: 120 DGTILSTQTNDKLKRIAEITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+IS VFEQ + A+++LE+L+A+A G+ LL+ EQ ++ A + L + Q Sbjct: 180 IYGEISRKVFEQARDAKSQLEQLKARADGMELLSEEQRAAMQAEVTRLDTQLTDTQRRHQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q W + +QE + Q+A A A P L L+ ++PA L+P ++ Sbjct: 240 QTQSQRQWRLDLAQGEQEVKTAEARQQEADAALTAAAPDLKKLADSEPAEALKPLHQQWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ-----------QQQQSLN 349 + SAA +++ ++ + A + + A++ SA++ ++ + L+ Sbjct: 300 QASAACQQTETELKALHAEREKLQAHQLAQHQTASQLSAQVAAQAQQALQQSQREAKQLD 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA--------- 400 + H + Q WR QF Q+ L QQ EQ++ A Sbjct: 360 DFCATHPQRAQLGERLGVWRQQFEQRVKLNRDLAAQQQAQQKLEQEIAETARQSATQASA 419 Query: 401 ---AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ------KRLAQLQVAIQN 451 A TAD R Q L L +Q ++L L + Sbjct: 420 VASAEKAKTTADAALEKTQTEQNLRLAGQTLAELRQHWQGEQAGLNRWQQLEALAQRRRE 479 Query: 452 V--------------TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 + Q+ + AL +R+++KE Q+AD + + EQE RI++LE R Sbjct: 480 LAVLQTTQATQVQQGEQKIEAQEKALVALREQHKELAAQVADKQKLLEQERRIQSLETHR 539 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 QLQ G+ CPLCG+ HPA+ Y AL+ ++ L + ++ L ++G + + A Sbjct: 540 RQLQPGEACPLCGAHEHPAIADYAALDVSATETALKEKQALLEALVQKGQQAKTEQAATQ 599 Query: 558 KQLQRDENEAQSLRQDEQALTQQW---------------------QAVTASLNITLQPLD 596 + + Q+ +W Q + ++ N Q L Sbjct: 600 ATQKEWLAQQAKTTQEIARAQAEWTEFLAGLSSETPLATDAWQEAQTLASARNAAEQALA 659 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + L A D+ E+ L + Q + ++ QQ Q QL T L A T Sbjct: 660 KLADRLKAADQGEQALNAARKTATEAAQTLLNASNQLKLLQQTAQTTQLRQTELAKAAQT 719 Query: 657 LPQE--------------------DEEESWLATRQQEAQSWQQRQNELTALQN----RIQ 692 L QE DE WL R E WQQ Q L + Sbjct: 720 LTQERAELDSKLAATLTDAGYETPDEPTIWLQERDGEWLHWQQTQKRRHELAEILIKQQD 779 Query: 693 QLTPILETLPQSDELPHCE-----------------------ETVVLENWRQVHEQCLAL 729 + Q E + T E + +Q A Sbjct: 780 RFDAAQTQAAQWLERWKTQAAKRPVAEQEPRPDEATDDPAAALTRSAETIADLTQQLAAQ 839 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 +Q L+ +++ +A + TAL AS F D A+ AAL+ +L+QLK+ Sbjct: 840 QGRQTQLETNVTQQKKAVDEASTAWQTALAASPFADLAAYAAALLPTDERQRLQQLKEAR 899 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDD--GLALTVTVEQIQQELAQTHQKLRENTTSQG 847 + ++QA+ ++ E L + Q P + + +++ LAQ RE + G Sbjct: 900 QLAKQQAEAVLKAAGEKLLRLQTTPPPQDSAESPIPPLAELEAALAQLETSRRELSEQLG 959 Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 R L +D RQ QQ L + IA T + + W L+SLIGS GDKFRKFAQGLTLD+L Sbjct: 960 AQRALLTRDEQARQSQQALFKDIAAQTAESDLWQRLDSLIGSARGDKFRKFAQGLTLDHL 1019 Query: 908 VHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALAL 967 +HLAN L RLHGRYLL+RK + LE+++VD+WQ + RDTRTLSGGESFLVSLALALAL Sbjct: 1020 LHLANSHLARLHGRYLLRRKTTGELELDIVDSWQGEVARDTRTLSGGESFLVSLALALAL 1079 Query: 968 SDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 SDLVSHKT IDSLFLDEGFGTLD++TL+ AL+ALD LNASGK IGVISHVE MKERIP Q Sbjct: 1080 SDLVSHKTSIDSLFLDEGFGTLDADTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQ 1139 Query: 1028 IKVKKINGLGYSKLES 1043 I+V+K G+GYS+L Sbjct: 1140 IRVEKGGGVGYSRLRI 1155 >UniRef50_D0J7H7 SMC protein-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J7H7_COMTE Length = 1143 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 429/1149 (37%), Positives = 566/1149 (49%), Gaps = 112/1149 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LRLKNLNSLKGEW IDFT PFA NGLFAITG TGAGK+TLLDAICLALYH+TPR Sbjct: 1 MRILKLRLKNLNSLKGEWNIDFTAAPFADNGLFAITGSTGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++S S ND+MTR T EC AEVEFEVKG AYRAFWSQ RAR +PD LQ PRVELA A Sbjct: 61 LDSISGS-NDIMTRHTGECEAEVEFEVKGVAYRAFWSQRRARGKPDAALQAPRVELALVA 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL +KDK A +TGLD+ RFT+SMLL+QG FAAFL A ERAELLEELTGT+ Sbjct: 120 DGSILTTHIKDKTRRIAEITGLDFARFTKSMLLAQGGFAAFLQATANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+IS VFE+ + AR LEK QAQA G+ LL + L + +L L Q Sbjct: 180 IYGRISQSVFERARDARQALEKQQAQAQGMQLLDAGTREQLQSQAALLQTGLTDLQARHQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q W + + +E + + A A A L L PA+ ++P R Sbjct: 240 QLQTVQRWQAQTMQAMEEVEQARNAQANAQQALSDAAQDLLRLQAHGPAQAIQPMHHRWQ 299 Query: 301 EHSAALAHIRQQIEEVNT-----------RLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + Q+++++T + Q L + Q Q +Q L Sbjct: 300 LAQDQQSEQAAQLQQLHTLRLRAQSAQWHQHQQARQLAGDQLQQSRLQLQSAQARQADLT 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 W Q H +GWR Q Q + Q + Q+T ++ L T Sbjct: 360 AWQQAHASHALLGENLSGWREQLQQGQQLQRQTVQTEGQMTQLQKLARQLQQQADAQTQQ 419 Query: 410 ---------------------------------EVATALAQHAEQRPLRQHLVALHGQIV 436 ++ + Q Q L Sbjct: 420 STQSTRQVSQTLQQQQAAEQALQQQLTTHGSLSQLRSHWQNAERQLHHWQQLQEHAALRQ 479 Query: 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQ 496 P + + A+ +V ++ A +++R +YK +++AD + + +QE I++L+ Sbjct: 480 PLDVQQQRNSQALSSVDSRIQEQLAQRDDLRAQYKALKEKVADKQALLDQERLIQSLQEH 539 Query: 497 RAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 RA LQ G CPLCGS HPA+ Y AL+ + L ++E++ L +G L L Sbjct: 540 RAALQPGDACPLCGSQDHPAITEYAALDVSATAAALQQAQSELESLQRQGEQLNTALATA 599 Query: 557 TKQLQRDENEAQSLRQDEQALTQQWQAVTAS----------------LNITLQPLDDIQP 600 Q Q+ + + Q++ Q + +W + A + I Sbjct: 600 QGQRQQQQEQHQAIAQQIEKWLSRWADLRAQSAVPLDEAAWQQPEALRTARAEAGQQIVQ 659 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + E R L Q + H QQI Q Q Q LT A L Sbjct: 660 LQQNLADAETAERQLQQSKDACQAALQHQQQIEYAQASTRQALQNNLTQQEQTAQALQAL 719 Query: 661 DEEESWLATRQQEA--------------------------------QSWQQRQNELTALQ 688 ++ L TR Q A Q+ Q+ ++ LQ Sbjct: 720 MQQAGGLQTRLQLALQTAGYALPDSADTADWLDARQQEWQQWQRQQQAMQELTQQIDLLQ 779 Query: 689 NRIQQLTPILETLPQSDELP--------------HCEETVVLENWRQVHEQCLALHSQQQ 734 +++Q E Q + Q +Q L Q Sbjct: 780 RQVEQAAQDAEHWLQRSQALPDMSADATAYTVPAAATLQDCRVLLEQTAQQLARLQGQAS 839 Query: 735 TLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRR 794 Q QS ++AQA++ ALQAS F D+ + AAL+ + L+ L L+ + Sbjct: 840 QAQATLEQLQQSTRQAQAEWQQALQASPFSDEAQYTAALLSDAEQQGLQALSNQLQGAAQ 899 Query: 795 QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLK 854 +A L ++ L Q D E I +++ Q + + G R +LK Sbjct: 900 RAAALQADASQRLTALQTQALSD-----EAPETITEQITQLETERAQQAEQLGAHRARLK 954 Query: 855 QDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQ 914 D D R QQ L+ +IA+ Q + W +L+SLIGS GDKFRKFAQGLTLD+L+HLAN+ Sbjct: 955 DDDDRRAGQQALLARIAEQEQDSDLWQHLDSLIGSARGDKFRKFAQGLTLDHLLHLANRH 1014 Query: 915 LTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK 974 L RLHGRYLL+RK + LE+++VD WQ D RDTRTLSGGE+FLVSLALALALSDLVS K Sbjct: 1015 LERLHGRYLLRRKPTGELELDIVDGWQGDVARDTRTLSGGEAFLVSLALALALSDLVSSK 1074 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 T IDSLFLDEGFGTLD +TL+ AL ALD LNASGK IGVISHVEA+KERIP QI+V+K Sbjct: 1075 TSIDSLFLDEGFGTLDGDTLEMALAALDTLNASGKMIGVISHVEALKERIPAQIRVEKAA 1134 Query: 1035 GLGYSKLES 1043 G+GYS+L Sbjct: 1135 GIGYSRLVI 1143 >UniRef50_C8Q3M6 Exonuclease SbcC n=1 Tax=Pantoea sp. At-9b RepID=C8Q3M6_9ENTR Length = 1179 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 521/1179 (44%), Positives = 665/1179 (56%), Gaps = 139/1179 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR KNLN+L+GEW IDF REPFASNGLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +SQSQN+L+TRDTAECLAEVEFE+KGEA+RAFWSQNRAR Q DG LQ PRVELARCA Sbjct: 61 LGVLSQSQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARCA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D +I+ADKV DKL+L TL+GLD+ RFTRSM+LSQGQFAAFLNAKP ERAELLEELTGTE Sbjct: 121 DNQIVADKVGDKLKLIETLSGLDFARFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS +FE++K+AR EL+ L+A+A G++LL +LT+ L+ L E L Sbjct: 181 IYGQISMQIFERYKNARAELDTLRARAGGMSLLDEAHRTALTSQLEQLNAAETTLNQQLT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QQ WL++ +L +E + QQALQ A ++A P+ L+ A+PA LR ++ Sbjct: 241 TAQQQQQWLSQSHQLAEEQQQAQQALQAAENAWQQADPERQRLARAEPAEKLRAKLQQRT 300 Query: 301 EHSAA----------------------------------------------LAHIRQQIE 314 + + +Q+ Sbjct: 301 QLQQENIALTQQYQQVQAQQQQAIAAQQQGETRYQAAQQAREQAQHAQQQLETLLTEQVI 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ +L + + + Q +QQ + +LN QE +R +Q +E WR++ + Sbjct: 361 PLDQQLTALQHQLSDQQREVTAQQQVVQQSRTALNQQQQESERLQQLWDEQQQWRSREAS 420 Query: 375 QTSDREHLRQWQQQLTHAEQKLNALA------------------------------AITL 404 S EHL +WQ +T +++ +A A Sbjct: 421 VASWGEHLTRWQSDITRLDEREQTVAQLRHQQQQQQQQLDQLQHALTARQQAAQPLAEQE 480 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 T +V ALAQH QR RQ L L Q Q + Q Q + +TQ+ L Sbjct: 481 TRDISQVREALAQHQAQRASRQQLTLLAAQWHALQPQQQQRQQKLHALTQQYQAEEQVLQ 540 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 +R+ +K + Q + DV+TIC+QE I L +RA+LQ PCPLCGS HPA+E Y+ LE Sbjct: 541 ALREEWKRENQAMLDVQTICDQERTIAQLADERARLQPNHPCPLCGSCQHPAIEQYRQLE 600 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 PG NQ RL AL+ V +L E G Q Q Q + E + + Q LT+QWQ + Sbjct: 601 PGENQQRLAALQTRVAQLKESGTAKGEQQRLSLLQQQALQQELKDIGQQLTTLTEQWQQL 660 Query: 585 TASLNIT--LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 T L +T ++ DD+ W QD+ E QL+ + + Q + Q + QR Sbjct: 661 TGELALTFAVEQQDDVIRWQQQQDQQENQLQAWLEHLQQQQLAQQQISSVQQALDDLRQR 720 Query: 643 QQLL-----------LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + L + LTLP + ESWL T Q Q WQ+ + LT LQ ++ Sbjct: 721 SETEYAAWQQLSQQLAQQLAQHQLTLPAREARESWLNTLQLRWQKWQESERLLTNLQPQL 780 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQ-------------------------- 725 + Q+ + + + Q Sbjct: 781 AKADSERHNQQQNLAREQQRLDALQQTLSALQLQNAEQHQRRQQLFGDRQVQAERQAHQA 840 Query: 726 ----------------------CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 +L Q+ L+QQ + A L+ A+ +ALQ S F Sbjct: 841 ALQAGEQELAQQLQAWQQAQSAVHSLSGQRAQLEQQQLTQAARLEAAETDLRSALQHSDF 900 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D+ A AAL+D + QL Q Q LE QR+Q L Q + L+ HQQ RP Sbjct: 901 ADEAALRAALLDVAEVDQLRQRLQALEQQRQQQTALSQQLVQRLSAHQQQRPAALSDELA 960 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 I L LR+N QGE +QQL DA R+QQQ+L+ QI+ ++ W L Sbjct: 961 A--DIGTRLENLRMALRDNARQQGEAQQQLSSDARLREQQQSLLTQISSHEAELTQWSQL 1018 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 N LIGS +GDKFR+FAQGLTLD+LV LAN+QL RLHGRYLLQR+A++ LE++VVDTWQAD Sbjct: 1019 NELIGSAKGDKFRRFAQGLTLDHLVWLANRQLDRLHGRYLLQRRATDELELDVVDTWQAD 1078 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 A RDTRTLSGGESFLVSLALALALSDLVSHKTR++SLFLDEGFGTLD+ETLDTALDALDA Sbjct: 1079 ATRDTRTLSGGESFLVSLALALALSDLVSHKTRLESLFLDEGFGTLDAETLDTALDALDA 1138 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 LNASGKTIGVISHVEAMKERIPVQIKV+K+NGLGYSKLE Sbjct: 1139 LNASGKTIGVISHVEAMKERIPVQIKVRKMNGLGYSKLE 1177 >UniRef50_A4XY70 SMC domain protein n=2 Tax=Pseudomonadaceae RepID=A4XY70_PSEMY Length = 1144 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 453/1146 (39%), Positives = 605/1146 (52%), Gaps = 103/1146 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSLKGEWKIDF EPFA +GLFAITGPTGAGKTTLLDAICLALYH TPR Sbjct: 1 MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +S +S S N+LMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ +G LQ P+VELAR A Sbjct: 61 MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVEGALQAPKVELARIA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+IL DK+++K LTA LTGLD+ RFT+SMLL+QG FAAFL A +RAELLEELTGTE Sbjct: 121 DGEILTDKIREKEHLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +YG IS V+E+ K++ L L+++A G+ LL Q L A Q L EE L+ QQ Sbjct: 181 VYGLISQQVYERTKASEQALNLLKSRAQGMELLDEAQRAELQAEHQRLNQEEASLLARQQ 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI- 299 Q W + +Q+ R + L+QA +A +L L+ ++PA L+P ++ Sbjct: 241 ALQGQRRWCEALQQAEQQCERARLGLEQAQQAHNEAAGELQRLAASEPAARLQPLYQSWQ 300 Query: 300 ----------AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 E A R E + +L + L +Q+ +L Sbjct: 301 QLQQDRQQAQQELDDMQAQQRHSSEREHQQLWLASRYARQCLSLHQSEERSLAEQRDALQ 360 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 L+ + + GWRAQF Q+ + + + ++L L L A Sbjct: 361 ARLRATPQRARLGELLGGWRAQFDQRGQLLMRQQTLRAGMAQEREQLATLQRQRDQLAAQ 420 Query: 410 E--------------------------------VATALAQHAEQRPLRQHLVALHGQIVP 437 + + Q Q L L Sbjct: 421 QTDAATRLEQAQAREAGQHSELQALLGADDEAGLRQRWQQLQVQGRALDRLEQLAQSREQ 480 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 +++A+L + + + +N + +R+RYK QQ+AD + + EQE RI+ LEA R Sbjct: 481 MAEQIAELTPRLAQLHTQHAAKNDEIIGLRERYKVLKQQVADKEKLLEQEQRIQDLEAYR 540 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G+ CPLCGS HPAV YQAL+ + L +++ +L +G TLR +L + Sbjct: 541 AHLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLESQGGTLRDELTRLA 600 Query: 558 KQL-----------------------------------QRDENEAQSLRQDEQALTQQWQ 582 Q+ + Q L Q+ Sbjct: 601 TQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQREHEQHLGQLQQRLA 660 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE-LQGQIAAHNQQIIQYQQQIEQ 641 V Q + A + +++L LL++ E LQ + N+++ +Q++ Sbjct: 661 QVETRQAELTQARSAREIAERALADMQQRLALLARDEENLQARQREQNERLQGLEQELRH 720 Query: 642 RQQLLLTTLTGYALTLPQEDE-------------------EESWLATRQQEAQSWQQRQN 682 Q LL +L G+A LP + + + ++ + + + Sbjct: 721 HDQALLASLDGFASELPADADTWLAEQASAWRDWQQAQAQHQQVQEQLRETQRLLAEAEA 780 Query: 683 ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVL 742 Q R Q P+ P +++ + AL +QQ+ Q Sbjct: 781 RAEQWQQRWQTEQAQALIEPEPVAQPEQALQGAIDSLASAQRESDALRGRQQSQQSLLQQ 840 Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 Q L +A+ ++ AL AS F D QAFL AL+D++ +L L+ L+ + Sbjct: 841 LQQRLSEAEQRWQQALAASPFTDLQAFLDALLDDEERERLTSLQARLQQALTE-----AT 895 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 T A Q + +T+ ++ ++L LRE + QGE+R QL+ D R Sbjct: 896 TLLAAADAQWQQLSTTPQTELTLAELDEQLQALQLTLRELSQRQGELRAQLQADDARRSS 955 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 QQ L +IA + W LN LIGS +G KFRKFAQGLTLD+L+HLAN+QLTRLHGRY Sbjct: 956 QQALFAEIAAQESEHALWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHGRY 1015 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 L RK+S LE+EV DTWQAD RD RTLSGGESFLVSLALALALSDLVSHKT IDSLFL Sbjct: 1016 QLARKSSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFL 1075 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLD ETL+ ALDALD LNASGKTIGVISHVEAMKERIPVQ++V K GLGYS+L+ Sbjct: 1076 DEGFGTLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLD 1135 Query: 1043 STFAVK 1048 + FAVK Sbjct: 1136 ARFAVK 1141 >UniRef50_C8NB10 ATP-dependent dsDNA exonuclease (SbcC) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB10_9GAMM Length = 968 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 293/1039 (28%), Positives = 448/1039 (43%), Gaps = 81/1039 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I ++RL NLN+L G W+ID ++ N ++A+TGPTGAGKTT+LDAI LALY TPR Sbjct: 1 MRIHTIRLANLNALTGTWEIDLDHPAYSDN-IYALTGPTGAGKTTILDAISLALYGRTPR 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ + ++ N++M+R + C AE+ F + YR+ WSQ+RAR + G LQ P+ ELA Sbjct: 60 LARIGKAGNEIMSRHSGTCHAEITFSTRTGRYRSHWSQHRARRKAGGELQNPKHELADAE 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++LA +KD LTG+DY RFTR+MLL+QG FAAFL A P ERA LLE++TGTE Sbjct: 120 SGELLATGLKDVAAAIERLTGMDYQRFTRAMLLAQGDFAAFLRAAPDERAPLLEQITGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + A + +L + +G+T L +LT L + L T QQ Sbjct: 180 IYSRISIAVHERLRDALEQQRQLATETAGITPLDAATHTALTQESAALQKQLAALATRQQ 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q +L EL E +R + A + P+ L+LAQ A L + R+ Sbjct: 240 QTAAALARAQNIAELTAELARLDEQHTAHQAALARFAPERERLALAQRAALLDADYARLD 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 R + ++ + A A+ + + A + + ++Q L + R Sbjct: 300 TLRHTQQQDRTALATLDAQAPVHTAAVAAAQQNLAAATTRVHAEKQRLAAAQPRWQQTRA 359 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 +++ LR ++QL EQ A L A E A A+ Sbjct: 360 YDH-----------------TLRHQREQLATLEQSAATHTAAQTALAAAEKHAAAARENS 402 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 R Q RL +E + ++ Sbjct: 403 ARADVARKKTETALAAHLQGRL---------------------------LREYRAEKDNI 435 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 RI LE QRA L G+PCPLCG+T HP A + Sbjct: 436 LRELAYHQRIADLEQQRAHLHDGEPCPLCGATEHPYASELPAQPDDLT------------ 483 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 E T + + + +Q + ++ S R+ +Q + + Sbjct: 484 ARLETLDTYIKRAETLGEQHENAQHALASAREKQQQTENTLALAAEKARNSAVHAEQHAA 543 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + + L + + A + I + + +E+ + T T A Q Sbjct: 544 LQQTYAQTLAARQALLVNRDPDAEETAQQRAIAEAEAAMEKARDTCQTAQTAAAANQQQR 603 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 + + L +QQE LQ QQ L+++P ++ L E Sbjct: 604 AQLHARLTAQQQE-------------LQTAEQQFAAALKSIPVNNPLRAHETETNPLPCE 650 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 + + + ++ F D+ A+ AA + T Sbjct: 651 AGEGTGIPMKKAKAFYMGTRGGGVKNRAATTD------FTETFADETAWQAARLPAATRE 704 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 L + L+ Q T A LA DD +Q + Sbjct: 705 ALARQAAALDQQTLTLHTRQQDRAARLASLTAQSTDD-----PDTATLQARQEADEHTRQ 759 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 ++ + + +L + ++ Q IA+ + W L+ LIG+ +G K+R +AQ Sbjct: 760 QHQQTLAANQHRLAEHKRASERLAAQQQAIAKQAAETRRWQNLHELIGAADGKKYRNYAQ 819 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 LT +++ AN+QL +L RYLL + LE+ ++D +Q R + LSGGESF+VS Sbjct: 820 SLTFASVIAQANRQLVQLSDRYLLTADPARPLELNIIDNYQGGETRSAKNLSGGESFIVS 879 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALAL L+ + +ID+LFLDEGFGTLD ETLD+AL+ L L GK IG+ISHV A+ Sbjct: 880 LALALGLAQMSGENMQIDTLFLDEGFGTLDEETLDSALETLAQLRTHGKHIGIISHVAAL 939 Query: 1021 KERIPVQIKVKKINGLGYS 1039 ERI +I++ NG Sbjct: 940 TERIATRIQITPQNGGNSI 958 >UniRef50_A9BQD0 SMC domain protein n=2 Tax=Comamonadaceae RepID=A9BQD0_DELAS Length = 1165 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 438/1170 (37%), Positives = 598/1170 (51%), Gaps = 132/1170 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRLKNLNSLKGEW+IDFT+ PFA NGLFAITG TGAGK+TLLDAICLALYH+TPR Sbjct: 1 MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+N+S S NDLMTR TA+CLAEVEFEVKG+ YRAFWSQ RAR++ DG LQ P+VELAR Sbjct: 61 LNNISASANDLMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDRLDGALQAPKVELAR-G 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL+ + +DKLE TA +TGLD+ RFT+SMLL+QG FAAFL A ERA LLEELTGTE Sbjct: 120 DGSILSSQTRDKLEQTAAITGLDFERFTKSMLLAQGGFAAFLQANANERAGLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VFE+ + AR L++L+AQA GV LLTPE +L A L E+ L Sbjct: 180 IYGLISQKVFERARDARQRLDQLKAQADGVELLTPEARDALQAQADSLVTEQATLQADYL 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q W + + Q + A E+A P+L L+ +PA+ L+P + Sbjct: 240 RAQAQHQWQQQLAQATQTLQAARTGCADAAQALEQATPELERLAHDEPAQALQPLHQAWQ 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALR-----------ASIRHHAAKQSAELQQQQQSLN 349 +AA RQQ++++ Q T A A + A A Q + Q+L Sbjct: 300 RSTAACDDSRQQLQQLREHEQQTQARLLLQHRHAQALSARLAQAAQDTLARQQAEHQTLE 359 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 + +H WR QF + S ++ QQ L + + +A TA Sbjct: 360 QFCTQHAAHALLGERLGSWRQQFKLRASQQQQAANQQQALRKLDAEQARMAQSAEAGTAQ 419 Query: 410 ---------------------------------EVATALAQHAEQRPLRQHLVALHGQIV 436 E+ ++ L + Q Sbjct: 420 VQAATDAQARVSAALQHAQDEQAQRLQGSGGMAELRAREQAEQDRLHLWRQAETQAAQRR 479 Query: 437 PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQ 496 ++ A L+ +++ + ++ +L +RQ+YK +Q+AD +T+ QE RI++L Sbjct: 480 ELARQQAALEQELRDGEAQARAQDTSLQALRQQYKSVKEQVADKQTLLLQEQRIQSLSEH 539 Query: 497 RAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI 556 R LQ GQPCPLCG+ HPAV AY+AL+ ++ L ++E+ L +G T R L A Sbjct: 540 RHALQPGQPCPLCGAHEHPAVAAYEALDASATEAALRRKQDELDALQTQGETARATLAAT 599 Query: 557 TKQLQRDENEAQSLRQDEQALT---------------------QQWQAVTASLNITLQPL 595 T + +A L QD QQ + AS + L Sbjct: 600 TAAQAARQRQADELEQDIARWHGTWNDTWQGLTQPLQLAPDSWQQADTLAASAQACARQL 659 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAA---------------HNQQIIQYQQQIE 640 D ++ + A ++ E+ ++ + Q H+ + + QQ I Sbjct: 660 DTLKRAVQAAEQGEQAVQQAKDAAQHSRQSLQTAQGQLALQQQALADHSARREELQQSIA 719 Query: 641 QRQQLLLTTLTGYALTLPQE-----DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 Q +L + D+ + WL R+ E Q WQQ +++L L + Sbjct: 720 GLQAEAQALNAQLQASLGEAGHTLPDDAQPWLEAREAEWQHWQQARHDLQQLAQSMALQR 779 Query: 696 PILETLPQSDELPHCEETVVLENW---------------------------RQVHEQCLA 728 E + + E Q+ + Sbjct: 780 KECEAAEADAQRWKTQSETQWEAQWEEQRTAQPHPADTAVAEPPSLPLPPVEQLPQALAE 839 Query: 729 LHSQQQTLQQQDVLA--------------AQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 S L ++ + +A++ + AL AS F D+ AFL AL+ Sbjct: 840 CASDIAALTRRQDALQGQQQQAQATLARQREEAAQAESAWQAALAASPFADESAFLQALL 899 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 +L L+Q L+ +++A TL+ A Q D E IQ L Sbjct: 900 PASERQRLAALRQQLQAAQQRAATLLEAAQREHADLQAQALTDLAP-----EAIQALLQT 954 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 ++ + G R QL D RQ QQ L + IA + W +L+ LIGS +GDK Sbjct: 955 LQERHTALSEQLGGTRAQLADDQRRRQGQQALFEHIAAQASDSDLWQHLDGLIGSAKGDK 1014 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 +R+FAQGLTLD+L+HLAN L RLHGRYLL+RK LE+++VD+WQ D RDTRTLSGG Sbjct: 1015 YRRFAQGLTLDHLLHLANLHLARLHGRYLLRRKPEGELELDIVDSWQGDTPRDTRTLSGG 1074 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 E+FLVSLALALALSDLVSHKT IDSLFLDEGFGTLD++TL+ AL+ALD LN SGK IG+I Sbjct: 1075 EAFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDADTLEIALNALDRLNDSGKMIGII 1134 Query: 1015 SHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 SHVEA+KERI VQ++V+K G+G+S+L + Sbjct: 1135 SHVEALKERIAVQVRVEKGGGVGHSRLVVS 1164 >UniRef50_UPI000196C4FF hypothetical protein CATMIT_02378 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C4FF Length = 1051 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 177/1104 (16%), Positives = 386/1104 (34%), Gaps = 121/1104 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ S + IDF+ + LF ITG TGAGKTT+ DAI ALY E+ Sbjct: 1 MKPIKLVMEAFGSYASKTIIDFSEP---NQNLFLITGDTGAGKTTIFDAIVFALYGESSS 57 Query: 61 LSNV--SQSQNDLMTRDTAECLAEVEFEV----KGEAYRAFWSQNRARNQPDGNLQVPRV 114 N + E+ F + Y G + R Sbjct: 58 TLNKKTGTLLQSQFASLDVKPYVELTFSQGYGDDEKIYTIHRIPQHYTYYKAGAKKGLRK 117 Query: 115 ELARCADGKIL-----ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 E A ++ K+ + + L +F + +++QG+F L E+ Sbjct: 118 EKAESGSIALMMPDGSEYPQKEANKKIIDIVHLTKEQFMQVAMIAQGEFMDVLRKTSNEK 177 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKL-------------------------- 203 E+ +L TEIY I + ++ K + + Sbjct: 178 KEIFRKLFHTEIYNDIVEELNQRRKETEKSIGDIKTKCMSEAGHLSVDEGYEQLVFYIEA 237 Query: 204 --QAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQ---SLNWLTRQDELQQE 258 + + S + L E + L ++++ L ++ +++ L+ + Sbjct: 238 IKRGEISYLDELVQELEVYCKIQEEKLNEQKQSLNETEKLKEEKKFQLDKGRELIDAYSN 297 Query: 259 ASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNT 318 + L +A +E + S A ++ ++ + L + +++ Sbjct: 298 LEVASKQLTALVAHKEVIENNYKMASTIDHAYKIKQAYDAYVDADKQLKLTQ---SKLDE 354 Query: 319 RLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSD 378 L+ LR+ K + + ++ + QE D+ ++ + + + + Sbjct: 355 ELKREPELRSKYEELKEKDNRADIKHEEFVRYCTQETDKTKKDLDNRKTLSDKTKEISDI 414 Query: 379 REHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQ 438 +H +QL H + +L + + + + V L Q Sbjct: 415 NKHTDDSIEQLNHIKNSKKSL--------VKKQEEGKKELDTLKDVDTEAVVLESQRKDF 466 Query: 439 QKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTLEA 495 + ++ +++ + + Y ++ I E+ +I Sbjct: 467 KLKVESYNQLVKDFNS-IQIKEKEFITTQHNYARLSENYGKKNHIYEEANKIFLDAQAGI 525 Query: 496 QRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDA 555 + L G PCP+CGS HP+ + + EE LR D Sbjct: 526 LASTLVEGTPCPVCGSIHHPSPACLKEGKVPT---------------KEELKDLRETKDQ 570 Query: 556 ITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ----PWLDAQDEHERQ 611 +Q++ +A SL+ + ++ + L L+ +D++ ++ + ++Q Sbjct: 571 ALILMQKESAKASSLKTTLDDMKTKYDLDLSKLGAILECDNDLELFEKTLVNEKQILQQQ 630 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ 671 L + E ++ + I +Q E+++ + + Y + D S L + Sbjct: 631 ADHLRDKKERFNELNTLLESIDIKLKQYEEKETAITEAIHQYEVKKASLDTTISQLKNQL 690 Query: 672 QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHS 731 +++ L+ L + E + + H+ Sbjct: 691 S---------------YASVEEAQKALDKLIKDQEAEDIAYKLFKQKVSASQTAYDKCHT 735 Query: 732 QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLEN 791 T + + +++A + ++ DD Q ++ +++++ Sbjct: 736 LINTYNESLPRLKERVEQADNHYSHLVEELQCDDWQNIISKY-----------QEKDIQQ 784 Query: 792 QRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ 851 Q + + +E ++ + + ++ E Q + + Sbjct: 785 FNEQYISYTRKFSEYTSKKETIEKGINGQPCPELTVLENEYNQAMDTYKNQAGVVQVLEH 844 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSK---EGDKFRKFAQGLTLDNLV 908 + ++ ++ ++ + L + + + Q L+ ++ Sbjct: 845 NYTNNNESLNTLDDIVTHAKKLIHKNHQLTTLYNQLSGNVSGSRMDLETYVQRTYLERIL 904 Query: 909 HLANQQLTRLH-GRYLLQRK--------ASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 AN++ + G+Y L K ++ L++ V ++ D+ R+ TLSGGESF+ Sbjct: 905 VEANRRFYDMSAGQYELHLKNIEQAGEGKNKGLDLMVY-SFVTDSEREINTLSGGESFMA 963 Query: 960 SLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 +L+LAL ++D + + +D +F+DEGFG+LD + D A+ L ++ K IG+ISH Sbjct: 964 ALSLALGMADEIKESAAGIDLDIMFIDEGFGSLDDHSRDEAVKVLMDMSEGTKLIGIISH 1023 Query: 1017 VEAMKERIPVQIKVKKINGLGYSK 1040 V +K+ I Q+ V K + + K Sbjct: 1024 VSELKQEIEDQLVVSKDDNGSHVK 1047 >UniRef50_D0MCK6 Exonuclease SbcC n=16 Tax=Vibrio RepID=D0MCK6_VIBSE Length = 1018 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 221/1069 (20%), Positives = 425/1069 (39%), Gaps = 81/1069 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ IDF + N LF I GPTG+GKT++LDAIC ALY ET Sbjct: 1 MKPIKLTMQAFGPFAKTEVIDFEK--LGRNPLFLINGPTGSGKTSILDAICFALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR----VEL 116 ++ +EF + G+ YR S + + G + Sbjct: 59 NERQGIQMRCDLSAQDLPTEVVLEFSLHGKQYRVVRSPEQEAPKARGEGMTVKKHTAALY 118 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 K++ K + + GL+ +F + M+L QG+F L A KER E+ +L Sbjct: 119 ELGETEKLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGV--------TLLTPEQVQSLTASLQVL 228 T+IY +I + ++ + ++ Q G Q++ T L+V Sbjct: 179 FQTDIYKKIEYALKDKASAISKAKDEFDNQIRGALQVAGVSSEQELLHQLEQATEQLEVD 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP 288 +E+ + + L + + + + AL+ L + + + L A+ Sbjct: 239 RKKEQASLDKLNVAKSELQKAETINGEFSKREQAENALKLHLEHSDSIKVRQQQLENAKN 298 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 A + + + +RQ+I + L A+ + + + + E + L Sbjct: 299 ANKIELPYVALQNAKTQTQELRQKIVALKESLDKANAVTKE-KENLQQSAKEAAAKVPQL 357 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + + + E A + + ++ +Q + KL A Sbjct: 358 TQLQYQLESMKDKLVEKANLERKITAGHQQKQQFEATLKQYIELKDKLAFQAQQGQKDLE 417 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + ++Q +++ ++L L + + +T + +L E Q Sbjct: 418 QARVDVALVGSIDAEIKQK-----QRLLQDLQKLHGLTLELSKLTALTVSKQQSLQEASQ 472 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 RY + Q E + +L+AG+ CP+CGS +HP + + V Sbjct: 473 RYMQCQQAADT----IELKWHNAQAAVLAQRLKAGEACPVCGSQAHPNLATFVEE--VVT 526 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + ++ A + ++ L QL+ + + +N+ L+++ L + + +++ Sbjct: 527 KEQVQAARVKEREAQTSLNQLSNQLEQHNVVIIQHQNQIDQLKEE---LGEHAASEISTV 583 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 LQ L+D L + D +L+ + NQ+ + + +I + Q + Sbjct: 584 QTELQALNDQLLRLQSID-----------IEKLEKNVEQLNQRCLVGENKIHELQNQMAA 632 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELP 708 +T Q + Q Q + + + L + + Sbjct: 633 NE-----------------STVQANQEHLTQLQASIDPKYSSVDALERDISLTKEQILTL 675 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 + +Q SQ T +Q + Q L +A+ ++ ALQAS F+D+ + Sbjct: 676 NTGLEKAQNALQQAVLAQSNAESQLVTNKQWLSESEQKLSQAELAWNEALQASKFEDESS 735 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 +L + + + L ++ N + + + + + L ++ ++ + Sbjct: 736 YLNSRVTDDELQAWQKEIDNFKQTQTKLEQTLHDLNHALKALER----------PDLDSL 785 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 L + E R ++ R+ TL ++ +++ ++ + +G L + Sbjct: 786 NDSLTTLQAQYIEVRNQLDTTRSTFERIEKVRKDIATLHEKNSKLEEEYKVFGTLYDVAS 845 Query: 889 SKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEVEVVD 938 K G + +F G+ LD+++ A+Q+L+ + GRY+L RK L++ V D Sbjct: 846 GKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLDLMVED 905 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 + RD TLSGGESF+ +LALAL LSD+V S R+D+LF+DEGFG+LD E+LD Sbjct: 906 GYTG-KTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDPESLD 964 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 A+ L L +G+ IGVISHV +KE++ ++ V+ ++S Sbjct: 965 LAIQTLVDLQQTGRMIGVISHVSELKEQMAQRVDVEPSRVGSTVSVKSQ 1013 >UniRef50_Q0HHE7 SMC domain protein n=10 Tax=Shewanella RepID=Q0HHE7_SHESM Length = 1018 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 228/1071 (21%), Positives = 400/1071 (37%), Gaps = 86/1071 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL + IDFT +N LF I GPTGAGKTTLLD IC ALY +T Sbjct: 1 MKPLSLSMSAFGPFASTQTIDFTE--LGNNPLFLINGPTGAGKTTLLDGICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 M D+ F++ YR + R + G+ + A+ Sbjct: 59 NEREGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLY 118 Query: 120 ------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 ++ I+A KV D LTGLD +F + M+L QG+F L A K R ++ Sbjct: 119 KIAPDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV--------TLLTPEQVQSLTASL 225 +L T IY +I + + R +++ +A+ G+ ++ + Sbjct: 179 SQLFQTHIYKRIEDTLKAKAADIRNLVKEQRARRDGILQTAALTSDDELTAELSRIEPEF 238 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 T ++Q + A + + + Q ++ + Q L + Sbjct: 239 AAATAAKEQSVAAHLAALKQRDSAQQLFAEFTRLQELQAEALSLNEQQAQIATQTTRLEV 298 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 A+ A ++P + + Q + L + + A + L+ + Sbjct: 299 AKQALRVKPLLDNALSREQEASVAAAQRDSAQLTLDAAKLALSHAETAAQEIIP-LEHKL 357 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + + E A +Q +H + Q+ A L Sbjct: 358 REVEQQNSHLSALVPQLAEFASLEQALAQAKEILQHTKLQGQESKTALATLVEQRGHCEN 417 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHG--QIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + + Q A + L+QH L Q ++A Q ++ V + N Sbjct: 418 QLPALQSQSEQQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGVLEQVGLQGKALNTQY 477 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 YK + +L+ +PCP+CGS++HP Sbjct: 478 QAASTAYKSLQ-----------LKWFQGQAAILARELKPHEPCPVCGSSTHPQPAVSHED 526 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 P Q + + LD + K + L +Q A Sbjct: 527 LPTDLQLQAAQDAEAL------------ALDNLNKARAEYRGLQKQLEAQQQQANDLATA 574 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + + ++L+ ER ++ Q + + QQI QQQ Sbjct: 575 LGDKVELSLESHS---------QTLERLMQQAKQADDAAQALQLLQQQIKTLQQQESTLA 625 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 Q L Y + + LA + + + L + Q Sbjct: 626 QQLELERERYREQEGKVERLSGQLAEKAL----------RIPEEYRTLDVLNQAIANNQQ 675 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 E + V+ +Q +Q +A + ++ + +AQ TAL + F Sbjct: 676 QLEQIKRQIDVLRTAQQQATQQSVAAQTALSAAIERCHATVELQAQAQQTLQTALDNAGF 735 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D+ A AL+ ++ + L + K+ Q Q+ +TQ L++ + + Sbjct: 736 IDRDALREALLTDEQMQTLAEGKETYHRQCALNQSQLTQLTTKLSE----------STSP 785 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 ++ ++ L + +L+ ++ +L + + Q + Q+ + + G L Sbjct: 786 DLDALEALLTERLAQLKNAEELWSQLNTRLTLLNNTQTQLAVVDQKAKSLEDEYAVIGTL 845 Query: 884 NSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALE 933 + G+K ++F + LD+++ A Q+L + GRY L RK LE Sbjct: 846 ADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNKASGLE 905 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 +EV D + + VR TLSGGESF+ +L++AL LSD+V + ++D+LF+DEGFG+LD Sbjct: 906 LEVEDAYTS-KVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGFGSLD 964 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 ++L+ A+ L L ++G+ IGVISHV MKE+I +I + K + K+ Sbjct: 965 QDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKV 1015 >UniRef50_A6KXN2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroides RepID=A6KXN2_BACV8 Length = 1027 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 282/1063 (26%), Positives = 476/1063 (44%), Gaps = 60/1063 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI+++R KNL SL+GE+ IDFT EP S G+FAITG TGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MKIVAIRGKNLASLEGEFMIDFTVEPLCSAGIFAITGSTGAGKSTLLDALCLALFDCTPR 60 Query: 61 LSNVSQS----------------QNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARN 103 ++ ++ ++ R TAE +EV+F + GE +R+ W+ R+R Sbjct: 61 MNKAKENNVSVMDVADRGIAQNDSRSILRRGTAEGYSEVDFVALTGEVFRSRWTVRRSRG 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + G+LQ + L G + L + L GL + +F RS+LL+QG FA FL Sbjct: 121 KVSGSLQKVEMTLTNLTSGVEQQGTKTELLSRISELIGLSFEQFNRSVLLAQGDFATFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A+ ++AE+LE+LTGTEIY +ISA ++E+ K A +E + LQ + G+ LLT EQ+Q L+A Sbjct: 181 ARQPDKAEILEKLTGTEIYSRISASIYERTKRAESEYKLLQERIKGIELLTDEQLQQLSA 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L ++ L WL + L + +++L E E A+P+ L Sbjct: 241 EKEELQVRLSVSKKKEEALSGKLKWLEEEGRLNTGCIQAEESLSGIRKEIEVARPRYELL 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + + A+++R + + R ++ E+ ++ AL+ S EL + Sbjct: 301 ARIEQAQDIRDVYMEQRNARKQIDAGRSRLGEIEVAIRQNAALQTSANVQWEAAQKELAE 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + L+ + D+ R + + R Q ++ + Q + L + + Sbjct: 361 FKTYLSQQEPQLDKARALDVQLVENRKQLAESQKEAALALQAKDNL-----RQSVCKTEK 415 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 E TAL E+ L+ I L + + Q + A Sbjct: 416 DISLLMEKQTALQTWFERYTAYSQLIPAVELITSLLTNLEMARAQSVSNRQLLDKVKKAS 475 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 QR K Q+ + + + R QL+ G+PCP+CGS HP Sbjct: 476 EAEEQRLKSVQQEAERLNRLL-----PAEVLLLREQLEEGKPCPVCGSFHHPM------- 523 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 E+ Q + + + ++ E + L+ A + Sbjct: 524 -------------------REQTNVQSLQEEELNRAKEQVAKETEQLKNTLNARQLEMAR 564 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 ++A + + +DD ++ + L ++ L+ + +Q Q+ + + Sbjct: 565 LSALIENYVAQVDDTLKKVETYVSIIPNWKDLLEQGTLKHYVQQFGRQWNARLQEQTEIK 624 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI---QQLTPILET 700 + L + +E ++Q+ + Q NE L++ + + ++ T Sbjct: 625 EALTSKSAQRDSLKKEEANAIGLYEEKKQKEERQQAELNERARLRSSLLNGESTETVVAT 684 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + + + + + Q + Q L+++ V LQ+ + + + L Sbjct: 685 HARRQKELEQQLEKAMNLHHSLTVQAESYKGQTAQLEKELVRLTAVLQQDELKINEWLTL 744 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + D+ + +Q L+ + Q ++ + + +HQQ Sbjct: 745 QKETYAELEQLLSKDKSWILAEKQALGTLKEKETTLQAILAERRQKREEHQQ--APLKPD 802 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 E + + L T +I ++ +++ + +++ + E+W Sbjct: 803 TMENKESLIETLTACTAAKEMETGRLAQIEVTIQNHIKGKERIAGIEKELEEKNSIYENW 862 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTW 940 LN L GS+ G KF++ AQG TLD L+ AN+ L L RY LQR + L +++VD Sbjct: 863 AKLNELFGSQTGAKFKEIAQGYTLDVLLLYANRHLQDLAPRYELQRIP-DTLALQIVDLD 921 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 VR +LSGGESFLVSLALAL LS L S++ ++SLF+DEGFG+LD +TL A+DA Sbjct: 922 MMGEVRSVHSLSGGESFLVSLALALGLSSLSSNRMNVESLFIDEGFGSLDMDTLRIAMDA 981 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L+ L G+ IGVISHV M ERIP Q++V K G G SK++ Sbjct: 982 LERLQMQGRKIGVISHVAEMMERIPAQVQVVKT-GSGRSKVQV 1023 >UniRef50_C6J7Z3 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z3_9FIRM Length = 1117 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 214/1117 (19%), Positives = 424/1117 (37%), Gaps = 94/1117 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L E IDFT+ GLF +TG TGAGKTT+ D I ALY ET Sbjct: 1 MKPLKLTLSAFGPYADETVIDFTQ--LGGQGLFLVTGDTGAGKTTIFDGITFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV--ELAR 118 + + AE FE K Y S + R + G + L Sbjct: 59 GVREASMLRSKYAKPETPTYAEYIFEYKDAVYTVKRSPDYERPKTRGTGMTTQKGEALLT 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +DG+ K+K+ + L GLD +FT+ +++QG F L A +ER+ + +L Sbjct: 119 FSDGRAPVTKLKEVNQAVTELIGLDMKQFTQIAMIAQGDFRKLLLADTEERSNIFRKLFH 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL------------------------T 214 T+IY I + + ++L T Sbjct: 179 TDIYKVIQEKLKFEAGGLDKAYKELLRSIRQYTEQVRYSTEDQLGQQWILMEKNGFEGNL 238 Query: 215 PEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEE 274 E ++ L L+ D K + ++ L + + + + + +Q L E E Sbjct: 239 EESLEILEQFLKADKDNLKAVNKQIKENDTELEKVNQLLGKAHKEADAKARKEQLLQERE 298 Query: 275 KAQPQLAAL-----------SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 PQL Q + + L ++R++IE V+ +++ Sbjct: 299 GLLPQLEQAQKDAENGAKEPEEIQRLILSIQKEKENLKRYTNLENLRREIENVSKQIEKL 358 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 ++++ ++ L+Q+Q+ T + + ++ + +L Sbjct: 359 AIDSIALQNRQKEKKTVLEQKQKEYQTTDSAEKEKAETDFRKEKIDTLYAGVYKNCGNLE 418 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q +++ + + + A ++ L E+ +L +V +++ Sbjct: 419 FLQTKISELK-----IQSGQEEQLAKQIKKDLTDLEEKIVSGGNLEIKENSLVVCLQQIQ 473 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 +++ + Q+ ++ + + +K ++ ++ EQ A LQ G Sbjct: 474 KIEDQQKRY-QDLEKKAESKKKAYLTASQKRAEIKEILNKMEQAYLDGQAGILAAGLQDG 532 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK---------KLGEEGATLRGQLD 554 PCP+CGS HP + P Q + E + GE L+ + Sbjct: 533 MPCPVCGSVHHPKLTQTPKEVPTEEQLKKQKKLTEAAEKAASDASVQAGEAAGLLQRCRE 592 Query: 555 AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL 614 +T+ + + + ++ L + L I Q + Q + + L Sbjct: 593 ELTEGFKSYAAQFLPQEETQEILRNELSDHELCLFIKNQESSVQTGLEEIQKQKKVYQDL 652 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP-------------QED 661 L ++ E Q H ++ + Q +E+R+ L + L Q Sbjct: 653 LKKKEEFTTQSEQHAKEFQKLQISLEKRKSQLESIQEQLNNQLKEPVLSWIYEEDARQRM 712 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 + + L +Q+ ++ + + ++ L+ E + T +LE + Sbjct: 713 KTDPELLQDHSSETVYQKETGNVSQVLLQGKKAAEWLKQQQDILEQKQKDLTALLEQRKL 772 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF--------DDQQAFLAAL 773 + Q ++ T+ Q Q +++++ + ++ Sbjct: 773 LEMQIGKTQTELTTITDQINQNQQQTAAEKSRYEQLQKQRENMEKELGERTKEEILSQIQ 832 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + + +LE + + R + +T+ +A + + +++++ E++ + Sbjct: 833 LKTEEQKKLEIHYKTVTEAREVLEKRMTELDSVIASLTEQLKE---SISISAEELNAQKE 889 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG----S 889 Q+ + + ++ EI +L+ ++D ++ + ++ + + + L+ Sbjct: 890 NFAQQKKSLSENRDEIHARLEINSDMYEKIRRQQTELLKTETRWKWMKSLSDTANGTITG 949 Query: 890 KEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE-------ALEVEVVDTWQ 941 K + Q D ++ AN +L + G+Y L R+ LE++VVD + Sbjct: 950 KARIMLETYIQMQYFDRILARANIRLMTMSSGQYELVRRKENKSRVGKTGLELDVVDHYN 1009 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 VR +TLSGGE+F SL+LAL LSD + S ++D++F+DEGFG+LD + LD A+ Sbjct: 1010 G-TVRSVKTLSGGETFQASLSLALGLSDEIQSSSGGIQLDTMFVDEGFGSLDEDALDQAI 1068 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 AL L+ + +G++SHV +KERI +I V K Sbjct: 1069 RALKDLSQGSRLVGIVSHVAELKERIDKKIIVTKKRT 1105 >UniRef50_C7N5A9 ATPase involved in DNA repair n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5A9_SLAHD Length = 1081 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 208/1110 (18%), Positives = 387/1110 (34%), Gaps = 96/1110 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + E IDFT F +GL+ I G TGAGKT + DAI ALY Sbjct: 1 MKPLHLTMSAFGPYADEVSIDFT--TFGDSGLYLICGDTGAGKTIIFDAIAFALYGTPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 + S E++F +G YR + R + G E A Sbjct: 59 ENRTSSMLRSDFADPDTPTFVELDFSYRGSTYRIRRNPVYQRPKKRGEGFTTENERAEIT 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG +A K + E + G++ +F + ++++QG F L+A + RA + + Sbjct: 119 LPDGSTIAGK-QHVDETVVGILGIERLQFMQIVMIAQGDFRKLLSADTQTRAPIFRRIFA 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASLQ------- 226 TE + E+ + + +++ A + T E +SL L Sbjct: 178 TEPLLGFQKRMAERKNALEADHDRVMASVQNYADMIAVDETDEHARSLKEELSGGVQPET 237 Query: 227 ------------------------VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 L + A + Q + + R+D Q + + Sbjct: 238 ALREAERLVEADTSAADAAKQRAAKLQAIRDEAKAALESAQTNNGLIDRRDAALQVSEQA 297 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPARN----LRPHWERIAEHSAALAHIRQQIEEVNT 318 A QA A + ++ + P ++ +A + +E Sbjct: 298 LGAKTQAKAALDADAHLDDEIAALRARERDLRSNLPSYDEYGRLQSAFDEAARVLESARQ 357 Query: 319 RLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF---RQWNNEPAGWRAQFSQQ 375 R + +Q ++ + +R R + A + Sbjct: 358 AKTQVETELTQARKRRDEAEQAADEQAKAQHNRDMLAERLKIDRANDERCAAQAKTYDNI 417 Query: 376 TSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQI 435 + + + +QQ+ A+ A+ A +D + A A+ + + L Sbjct: 418 LDADKLIGKLKQQVEEAKSAQAAINAAIEQGVSD-IEQAAAEASGLGAATEDLFDAENDK 476 Query: 436 VPQQKRLAQLQ---VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI-- 490 Q +A+L + ++ Y + + +T + + Sbjct: 477 RAAQADIARLDACSAERTELADASAAAAKDAAAAQEAYLQAQSTFLECQTKLAEARKAYL 536 Query: 491 -KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATL 549 + A L+ G PCP+CGST HPA + P + L L+ + Sbjct: 537 DEQAGIIAAGLEPGSPCPVCGSTDHPAPAQARTDIPSS--ADLDELQEHYNETLAVANEA 594 Query: 550 RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHE 609 A+ + Q+ + A+ + I A+ E Sbjct: 595 SQNSGALKSDADGKRARLDAHIQEHGRAEELAALRAAAEKALAEAEARIDRSEQAKARCE 654 Query: 610 RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 +Q + ++ + A Q + ++ + T L DE+ Sbjct: 655 QQAKTAQEKRAVVEAKRADLQNALDDLAALKSQLSAAEATRATLQDGLETTDEKTIRSQA 714 Query: 670 RQQEAQSW--QQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCL 727 +Q Q Q +E L +R+ +L + Q+ + E ++ + Sbjct: 715 QQAHEQFLLTQGAFDEAVDLLDRLSELVKQAGSAAQALDDLEAELEQATAAQQEATTASI 774 Query: 728 ALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQ 787 + Q + + +A A + F+ +Q A Sbjct: 775 TAKAAAQAAAAKLPFPTKQELEAAIDEAAAQADASFETRQKQKDAFD------------- 821 Query: 788 NLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG 847 Q + + R A V Q++Q+LA+ Q+L+E + Sbjct: 822 ---------QASIAAAEAAARAEELVRQAGDDARRQDVSQLEQDLAEAEQQLQEAQDAAN 872 Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD----KFRKFAQGLT 903 I +++ + ++ + +++ A + Q ++ ++ + + F + Q Sbjct: 873 AIERRIHTNTSLLKRIEHELKRSADIEAQYKEVAIVSDVANGRMVKASHYAFETYVQSRY 932 Query: 904 LDNLVHLANQQLTRLH-GRYLLQRKASE------ALEVEVVDTWQADAVRDTRTLSGGES 956 + ++ AN++L L GRY L R+ L+++V D + RD +LSGGE+ Sbjct: 933 FEQMISAANRRLDTLSDGRYELVRREKGFSNRQVGLDLDVKDHYTG-KTRDASSLSGGEA 991 Query: 957 FLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 F SLALAL LSD V + ++D++F+DEGFG+LD E+L AL L L+ S K IG+ Sbjct: 992 FKASLALALGLSDTVQAHAGGIQLDTMFIDEGFGSLDDESLRLALKVLTELSGSDKHIGI 1051 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 ISH+ +K+ I +I V++ +E+ Sbjct: 1052 ISHISELKDNIDRKIVVERGRDGSSIHVET 1081 >UniRef50_A8RJV9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A8RJV9_9CLOT Length = 991 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 194/1054 (18%), Positives = 369/1054 (35%), Gaps = 90/1054 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L + GE +D GL+ ITG TGAGKTTL DAI ALY Sbjct: 6 MRPTELIISAFGPYAGEVTLD--MASLGDRGLYLITGDTGAGKTTLFDAIAFALYGNASG 63 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S + R A E+ F G+ YR + R + G + A+ Sbjct: 64 DSRKPRMLRSKYARPDARTYVEMGFSYSGKEYRVRRNPEYMRTKQRGEGETREKPDAQLH 123 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG+++ K L GL+ +F++ +L+QG F+ L+ + ++R + E+ Sbjct: 124 MPDGRLV-TGDKAVTVEVEGLLGLNREQFSQIAMLAQGSFSRLLSGRTEDRGIIFREIFK 182 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T+ Y + ++ K + +IT Sbjct: 183 TKPYQLFQEKLKDRAKGLYGRYADSRKSMEQYAG---------------------GVITE 221 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 E+ L W + L A +++ + + AL + A L + Sbjct: 222 GHSEELKLRWKEVPQGSLEALLEVLDQLIGADEAQQQGRDRAMALVRDEMA-ALGMELGK 280 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + +A + + + + + + Q + L + + Sbjct: 281 MQGDAAVCRDMAAAADVLRENMPVLEQAKVRYEREKER-----QADRDGLIGAVTRMEEN 335 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 + + G + + E L + +Q E++ + + + A ++ Sbjct: 336 LKTYDRFDGLQENLKACRKETESLEKRLEQAALEERQWKERNDSDEKIL-ESLRQAGEEY 394 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 + L G+I + L Q + + + + AA E R+ Sbjct: 395 QAALTAGERLREYSGRIGLLAEELGQYGQERKKLEAARERYRAAGEESRRA--------D 446 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 D Q ++L GQPCP+CGS +HPA Y + ++ L+ Sbjct: 447 DAYREMYQRFLDNQAGILASRLTEGQPCPVCGSVTHPAPARYLEEGKEAAKDKVDRLKAA 506 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 ++ + A L + + L + Q + + ++ + Sbjct: 507 AEEKDKAAARLSLEAGRLAGSLDTRYERMK------QQIDAEVATWKEDWQQRIRQAEAD 560 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 L A+ RQ R R+ L+ Q Q ++Q +++ + Sbjct: 561 AGALVAKTGDVRQGR----RYFLEQWELMMGQLKGQLERQAAAQKEKIQEKKKRKEYKEA 616 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 E + + ++ QQ Q L Q + ++L L+ + S + Sbjct: 617 IEGRRVLGRQSLEAASELKQQAQKMLAESQAKERELESRLKEMESSLP--YENRKAAQAE 674 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 + L + ++ ++ + AQA+ + D + + D Sbjct: 675 LAEKKAFLAGLEKAFKEAEESYNRISRRVSDAQARLEALRGRMAEKDAEGRESVGEDRDP 734 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 + + + + R + L + E + ++ ++ Sbjct: 735 VNGPDTMLPGGMDVRTVMERLEARMQENRLRQ----------------------SEARER 772 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI----GSKEGDK 894 L + + +L+ + R++ + ++ ++ L+ G KE Sbjct: 773 LTGLEQEKSRLHHRLETNRMARERISEQKASMEEIQKEWTWVKALSDTAAGEVGGKEKIT 832 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR------KASEALEVEVVDTWQADAVRD 947 +AQ + ++ AN + + G +Y L+R + L + V+D + R Sbjct: 833 LETYAQMAYFERIIARANTRFMVMSGGQYELKRCTEEDNRGKNGLGLNVIDHYNG-TERS 891 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +TLSGGESF SL+LAL LSD + + R+D+LF+DEGFG+LD +TL+ A+ +L L Sbjct: 892 VKTLSGGESFQASLSLALGLSDEIQSAAGGIRLDTLFVDEGFGSLDEDTLNLAMKSLGDL 951 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 + +G+ISHV +KERI QI V K G Sbjct: 952 AEGRRLVGIISHVGELKERIQHQIVVVKDKTGGS 985 >UniRef50_D0L9F7 DNA repair exonuclease, SbcC n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L9F7_GORB4 Length = 989 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 214/1075 (19%), Positives = 377/1075 (35%), Gaps = 129/1075 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ LR+ G+ +DF +++GLF + G TGAGKTT+LDA+ AL+ P Sbjct: 1 MRLHRLRMCAFGPFAGDTTVDFDE--LSADGLFLLHGRTGAGKTTVLDAVAFALFGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 + ++ + E+E V G R S + R + G R L Sbjct: 59 ARDTNRRLHSDHALPEHVPEVELEATVGGRRLRIIRSPDHHRPKRRGTGTTKVNARASLT 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ + + L G+ +F + +LL QG+FA FL A ++R LLE L Sbjct: 119 WLDGSGPDLTRLPEIGDAVTRLLGMSADQFFQVVLLPQGEFARFLRATSEDRERLLERLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT-----------------PEQVQS 220 TE +G + + + + + L + A V ++S Sbjct: 179 DTERFGDLEEWLRTEARESSAALTRRTAVIDRVAGQIVALGGAEAPAEPDLAWAQGCLES 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + + + + Q++ + R+ EL + + + L + ++ Sbjct: 239 ARSEAEQARAALEAARREVTEAQRAHDDGRRRAELHRRGVQAAERLSRLDDGQDDLAAVT 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 A L+ A+ A L P + +A + L + A A Sbjct: 299 ATLAQARRAAPLAPLLDEHELAAADAVTAERTWSRARDALVTLPGGAALSDADDATL--- 355 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + S+++W QE R+ AG A S+ + ++L + L AL Sbjct: 356 ----RDSIDSWTQESGRWEPLAARLAGRPAIVSEIDTLTAQFDDTARRLAELSEVLAAL- 410 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 D A A+ LR + L Q +K L V Q + Sbjct: 411 -------PDRRDRAQAELTRAVELRSRVPGLEAQRERAEKVTTALLAR-ARVDQALERIT 462 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + R+ + E +QL ++++ L G+PC +CG+T HP Sbjct: 463 TQVLVAREAHLETREQLVELRSR----RVAGMAAELAGGLVDGEPCVVCGATVHPEPARP 518 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 D + DE A + Q + Sbjct: 519 ---------------------------------DERGHVGEADEAAAAAAEQAAAVARGR 545 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 ++ A+L + LD++ +D E RL ++ + +++ Q+ +E Sbjct: 546 VESEQAALEERRKSLDEVIGAATREDTEELLQRLSTELADA----RRAAERVPALQRAVE 601 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 + T A + + LA+ +++ E T + + + L Sbjct: 602 AAAAEIDTVRADVATLDSAQSRRQERLASLREDLGELDVAVAEATGGRLSVTERRQELAD 661 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L ++ + + + A +A + A Sbjct: 662 LCEAA-------------------------GRLRDAVRARDAARSRRDEAGKRLTARCVA 696 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + FDD A +AL +++ + E Q R AQ + D A Sbjct: 697 AGFDDADALRSALASPESIQEWEARVQQAIGLRAAAQETLADAD---------IQDALAA 747 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 V V + L Q +++ +A + + + Sbjct: 748 EHVDVALLATALDTVRQAHDRAAGRHTIAARRVADLERFVADFWAAADALAPLRDRHAEL 807 Query: 881 GYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA------- 928 L L+ R + L+ ++ A+ +L ++ GRY Sbjct: 808 AGLAELVSGHGQNSRRMSLRSYVLAARLEEVLVAASARLHQMSSGRYEFVHSDAVGPRGR 867 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEG 985 L +EV D + VR T TLSGGE+F SLALAL L+D+VS +D++F+DEG Sbjct: 868 RGGLGIEVRDEYTG-TVRATTTLSGGETFFASLALALGLADVVSAELGGRVLDTIFIDEG 926 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FGTLD E LD + LD L + G+ +GV+SHV ++ERIP Q++V + + Sbjct: 927 FGTLDPEALDLVMGVLDELRSGGRVVGVVSHVGELRERIPAQLEVVRRDNGSSVH 981 >UniRef50_C8PR35 SMC domain protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PR35_9SPIO Length = 1092 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 210/1092 (19%), Positives = 386/1092 (35%), Gaps = 74/1092 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L N+ GE ++DF LF I G TGAGKTTL DAI A Y + Sbjct: 20 MRPKELILHNIGPFTGEHRVDFDTL----GSLFLIYGQTGAGKTTLFDAISYAFYGKPLG 75 Query: 61 LSNVS-QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR--NQPDGNLQVPRVELA 117 + ++ D A + F + + YR + + + +V Sbjct: 76 GRSGVMRNLRSHFADDYAISDVTLTFFIGAQLYRIKRQLPYTKEGRKLETPEEVSLEYYG 135 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + ++ +L L F+R +LL QG+FA FL A+ ++ E L L Sbjct: 136 NGGWENRSSTNKRETDAAIQSLIKLSDKEFSRIVLLPQGEFAQFLRAQSSDKKETLMHLF 195 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVT-----LLTPEQVQSLTASLQVLTDEE 232 + Y + + + E + ++A + L + + DE Sbjct: 196 PIKRYSDLMQEAKLRADKLQQEAQTIEANLETLHSRFVYHRYESDRAELLNEIDRIRDEH 255 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 ++TA Q + L E ++E R + L+ EE A + AQ A L Sbjct: 256 GGVLTALQTKNTELEQEKILAEKRKELERINEELEACRVREEDILNLKAKIEKAQRATPL 315 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 H ++ E AA A +QI E R++ A +++ + +A+ +QQ+ SL + Sbjct: 316 AVHVNQLLELEAACAADERQIREKRERMEDLTARMNALQDRQSDIAAK-EQQRDSLYAVI 374 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 + E +A+ + + Q++ + A Sbjct: 375 DSLRKAAVLEQEIGTAQAEEDKLKRAAVAAQAQLQRIEAQLAAVTEKTAALTPAVDALDE 434 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 Q L + Q+ + QL + + Q L E+ + Y Sbjct: 435 REHTYRGLQSRL-----DMEKQMHDILCKHEQLNTFLHSYAQAAAHARVQLAEIARDYDI 489 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 +T+Q++ ++ + R + A QL+ G PCP+CGS HPA R+ Sbjct: 490 QTEQISRIEEEKKAAERQRAAAALAEQLEEGTPCPVCGSVHHPAPAHASEQSAFSFDERI 549 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL---- 588 A + KL E + L + + + L +++ +A Sbjct: 550 EAAKRSATKLQHEKEKAQAALAGAEASYTNYQKQIDERAAAAEELRLRYKECSADAFPDG 609 Query: 589 --NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + Q +A + + ++ L+ + ++ Y Q+ +Q L Sbjct: 610 KDAAESRIKETAQRINEALQAYNASRKAFAEHKTLESESRNLQRERQDYAQRQHSAEQQL 669 Query: 647 LTTLTGYALTLPQEDEEESWLAT------RQQEAQSWQQRQNELTALQNRIQ-------- 692 Q D+ S L + ++ + A + Q Sbjct: 670 SGVSAALQEKRRQFDQAFSQLPEDICTVRLSADTEADTAAPDTKAAGKADKQGTGGRLKI 729 Query: 693 -----------QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 LE + + + + + + T + Sbjct: 730 LDAEASGAEIPDAETALEQCEALLQELKLTINAYQTDVSEAAQNLERIRGELSTAETHGR 789 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 AQ + A + A F D + A+ E + Q + + T Sbjct: 790 ERAQQRSEKAALLEAAYIKEGFADLEDLQQAVCSEPEIAQW----------KTEIDTFYE 839 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 Q A D +++++ + ++ E + + + + Sbjct: 840 QYAAYKQAAAGLEKDVSATEPRDLDELEAAVETLRKRYDEIQARLEVLNTEKAKLEELHA 899 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR--KFAQGLTLDNLVHLANQQLTRLH 919 Q L + +A T + ++W L + K + + L + AN++L R+ Sbjct: 900 QHTELTKALAVKTAEAQNWVALAKDLCGSNPRKLQFDTWILSAFLHEVTMFANKRLERMS 959 Query: 920 -GRYLLQRKAS-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 GRY L L++E+ D + R + TLSGGE+F+ S++LAL L+D + Sbjct: 960 EGRYRLAVSEEHGTGNAYRGLDLEIADAYTG-KCRPSATLSGGETFMASISLALGLADSI 1018 Query: 972 ---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 + RIDS+F+DEGFG+LD + L+ A+ LD + + +G+ISHV ++ RIP +I Sbjct: 1019 QARAGGIRIDSMFIDEGFGSLDEKALENAVGILDEIR-GNRMVGIISHVGELQSRIPQKI 1077 Query: 1029 KVKKINGLGYSK 1040 +V K + Sbjct: 1078 EVIKTGTGSSIR 1089 >UniRef50_Q1VZW9 ATP-dependent exonuclease SbcC n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZW9_9FLAO Length = 1007 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 270/1068 (25%), Positives = 464/1068 (43%), Gaps = 88/1068 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI SL KN+NSLKGE K+ F P S GLFAI GPTG+GK++LLDAICL LY TPR Sbjct: 1 MKIESLSFKNINSLKGEHKVHFDESPLNSGGLFAIIGPTGSGKSSLLDAICLGLYGRTPR 60 Query: 61 LSNVSQSQ----NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 +S+V++S+ ++T+ E A+V+F Y A WS + RN L+ ++L Sbjct: 61 ISSVTKSKIEQDGSILTKYQKEAYAKVKFSCNLGTYEATWSISTNRNNK---LRECEMDL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 A ++K + L L GL Y +F +S+LLSQG FA L + KER+ELLE++ Sbjct: 118 WNVATEISFSEKKTEVLAEVERLIGLSYDQFVKSVLLSQGDFATLLQSNEKERSELLEKI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTL--LTPEQVQSLTASLQVLTDEEKQ 234 T T IY I V+E++ S ++++ + + ++ E +L L ++E Sbjct: 178 TNTSIYRSIGKKVYEKYMSLKSKILTQKTILDNLQDKLISKETESDFKENLNQLKEKETI 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA-QPQLAALSLAQPARNLR 293 + Q+ L+ LT +++L E + + L+ L ++ L Q Sbjct: 238 ERKKLSEYQKDLDQLTLKEKLSSEENVVKTDLKTLLDHKQSFDNENQHKLEQHQKTLEFE 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 + ++ I + + S+ + Q + + Sbjct: 298 DELQEFNSLQKDGDRLKASITREQEEITKINSNINSLHQKTEDLLKTKVEPQAVESELEK 357 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDRE------HLRQWQQQLT------HAEQKLNALAA 401 + + N + FS + L+ +Q+L + ++++ Sbjct: 358 LQETHTELNTRRSSKLHDFSAKKQLLNKELEGLDLKFQKQELDSFIGELTRKSEISSEQI 417 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQ---IVPQQKRLAQLQVAIQNVTQEQTQ 458 L +V + EQ LR L + + +L +L+ + +++++ Sbjct: 418 QNLEKELKDVENLEKRIQEQEHLRDTLKEAAHESRILKDLGDQLLRLENKRSILHKKKSE 477 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + ++K ++L ++T E + +E R +LQ +PCP+CG+ HP E Sbjct: 478 YPEQIKLKESKFKTAEKELDHLQTKKENQNLRLEVEDLRQKLQKDEPCPVCGAIDHPYSE 537 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 + + L + A + +++ LQ E SL + + L Sbjct: 538 HLPEV---------------ISDLDKTIAKAKEIAKQLSRDLQHLNAEFSSLVKQIEDLN 582 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 ++ + + ++ + D L++ +E E L + Q + + QY+ + Sbjct: 583 KEANELHSKRSLNQEEFDLKFKELNSLNEGESYANL----EQKTRQTIENYKAFKQYKVE 638 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 ++ Q + EL +Q + ++ + Sbjct: 639 LKALQSSIS--------------------------------ILEELLDIQKEGKSISEKM 666 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 ++L + D+ T ++W Q+H + ++ S + +L + Q + L Sbjct: 667 KSLYKGDD-LGRLVTSYTKSWNQLHTELKSVSSSLDKQTSDKAVLNNNLSQLQQGLKSML 725 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + F + A+ M +L K ++ + + + L + + Sbjct: 726 EGKGFANIAEANASRMKSSNYNELLLRKSDIVKNIKVKEEKLEGLENQLKSLEFVHFTEK 785 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 + ++ I+ L T +KL + I++ L +N + +T+ I ++ + + Sbjct: 786 DKTEIAIDNIKVTLNSTREKLED-------IKRVLNNQKENLTEYKTIQDSIIEVQKANK 838 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRK--ASEALEVEV 936 W LN LIG G +F KFAQ L+L L+ L N++L +L+ RY L R + ++ V Sbjct: 839 KWEVLNRLIGDATGTEFNKFAQDLSLQRLILLGNKRLNQLNDRYELDRFIAGEDKNQLYV 898 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDT 996 +D R +TLSGGE+FL+SLALAL LSDL S I+SLF+DEGFGTLD ETLD Sbjct: 899 IDNHMGGLRRSVKTLSGGETFLMSLALALGLSDLASKNVEINSLFIDEGFGTLDPETLDL 958 Query: 997 ALDALDALN-ASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD L+ L S KTIG+ISHV A+KERI QI V N GYS+LE Sbjct: 959 TLDTLERLQAESNKTIGIISHVNALKERIQTQI-VLNRNTQGYSQLEV 1005 >UniRef50_B8CQ22 Exonuclease SbcC n=8 Tax=Shewanella RepID=B8CQ22_SHEPW Length = 1022 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 218/1061 (20%), Positives = 404/1061 (38%), Gaps = 66/1061 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + G+ DF E + LF I GPTGAGKTTLLDAIC ALY +T Sbjct: 1 MRPIKLTMSAFGPFGGQQVTDF--EALGVHPLFLINGPTGAGKTTLLDAICFALYGKTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + D F + YR + R + G +Q P +L Sbjct: 59 DEREGSQMRCDIANDDVLTEVTFTFALADNQYRIRRVPEQPRAKKSGDGYTVQKPEAQLY 118 Query: 118 RCA----DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + + ++ KV + LTGLD +F + M+L QG+F L A K+R ++ Sbjct: 119 KLDADGTEHILVPSKVSEATTEIELLTGLDADQFRQVMVLPQGKFRELLMADSKDREKIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEE 232 +L T+IY +I + + + + + + + G + + E ++L+ L L + Sbjct: 179 SQLFQTQIYRKIEDKLKFKAAAIKGAVRDHRNKRDGMLHNIAVESDEALSNELNNLAPKL 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 ++ + +L + +Q E+ + + L + + + + L Q + + Sbjct: 239 AVAAEKKETAKLALIEVNKQFEMAKLLLNDFENLDKLKRTATELATRKETVDLQQSSLDA 298 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 ++ + + + + + A + + Sbjct: 299 GQKALQLKPVLEMSLARDTEASQAQHMVSQARFAKQQTENALALSLTQYSSLAELELKLQ 358 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLT-ADEV 411 Q +Q + S Q + Q +Q AL + T A++ Sbjct: 359 QTQSEQQQLVQLVPQLQGLDSAQNALALASSQREQAQEKGVAAKAALDGLLAERTTAEQQ 418 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 L A + Q ++ H +++ + + + ++ A ++RQ + Sbjct: 419 VPQLECAAAELVNAQQALSGHSELIERFTHWQKAKSEVETTETALRAAKAQGQQLRQVFT 478 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 + Q +K + QL GQPCP+CGS HP + + P + + Sbjct: 479 QAQAQHQTLKLV----WHRGQAAMLAQQLTVGQPCPVCGSAEHPNLAQSEQQLP--TEEQ 532 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L + + E R + +T +LQ A L+Q + A+ Sbjct: 533 LQQAQLAEDQAAEALTQARAKYSGLTTKLQEQIKVADELKQKIEQTAADSAAL------- 585 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 +++ + +L+ Q+A +Q+ +Q + + + L T Sbjct: 586 --------SVEQLREQQQALKKLVETASHATQQLARLREQLQTWQVKEQTLRTALDTERE 637 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 Y Q + L +Q + + L + Q Sbjct: 638 RYQGVQTQVATLQGQL----------EQLLVAIPEQYRTVDSLNSAITQSEQLFAKQQQS 687 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 V+ ++ EQ + + + + + A+ L +S F +QQA + Sbjct: 688 INVIRQSHTNALEQDASAKAALVSAEANLSQTTELADNAKISLSEQLASSGFSEQQALIQ 747 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A++ E L QL + Q + Q E L Q +E I + Sbjct: 748 AMLPEAQLQQLAAEINQYQQDCVANQANLAQLHEKLQQQS----------KPELEDIAAQ 797 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 L + ++ ++ ++ Q + ++Q Q Q+ + G L + + Sbjct: 798 LNLLQTEQQQAEQEWQALQGRVTQLTNTQKQLNDADSQAKQLEDEYAIVGTLADVANGQT 857 Query: 892 GDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQ 941 G+K ++F + LD+++ A+++L + GRY L RK LE+EV D + Sbjct: 858 GNKVSLQRFVLSVLLDDVLLEASERLQLMSKGRYRLIRKEERAKGNKASGLELEVEDAYT 917 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 + VR TLSGGESF+ +L++AL LS++V + ++D+LF+DEGFG+LD ++LD A+ Sbjct: 918 S-KVRPVATLSGGESFMAALSMALGLSNVVQAYAGGIKLDTLFIDEGFGSLDQDSLDLAV 976 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 L L ++G+ IGVISHV MKE+I +I + K Sbjct: 977 RTLMDLQSAGRMIGVISHVSEMKEQIGTRIDINKSAVGSEI 1017 >UniRef50_A3TKY1 Putative exonuclease n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TKY1_9MICO Length = 1047 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 203/1098 (18%), Positives = 352/1098 (32%), Gaps = 107/1098 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L E +DF + GLF I GPTGAGKT+LLDAIC AL+ + P Sbjct: 1 MRIHHLTATAFGPFPDEIAVDFD--ALTAAGLFLIHGPTGAGKTSLLDAICFALFADVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 L + TA E+EF +R S AR + G + Sbjct: 59 L-RDKRGIVSDHAAPTATPSVELEFTCGTRRFRIHRSPAHARPKKRGTGTIEAPATVTLS 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R + +++ + + E+ + G+ +F + +L QG+FAAFL AK +R LLE+ Sbjct: 118 ELRSSTWTVVSTRNDEAAEVLNDVLGMGKEQFAKVAMLPQGEFAAFLTAKDDDRRALLEK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQ-------AQASGVTLLTPEQVQSLTASLQVL 228 L + + + ++ +++ + L+ A+ + V + +S Sbjct: 178 LFDITRFADVEEWLVDERRASEATVSSLRSGIDTDLARLADVVAASGLAQESFDDGEAPA 237 Query: 229 TDEEK------------------------QLITAQQQEQQSLNWLTRQDELQQEASRRQQ 264 DE L + +L+ + + R + Sbjct: 238 VDERTLDGRPALDPASPDAIRALLDATGIDLDAHVSEAMVALDAAVAAESAAATDAERAR 297 Query: 265 ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTM 324 + A+ +A L Q + A +A++ I + L+ Sbjct: 298 GVMALRDRARVARTTIADLDAVQEDISAARLTHDAASRAASVRGHVAAISREASELERAR 357 Query: 325 ALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ 384 A + A + + L+ D R+ A + S + + Sbjct: 358 AAVGAASARARTMAPDACDPTTLLDDLRVHDDTLRELVRLEASRADRASLARGHLDAITA 417 Query: 385 WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 L A A AE V +A Sbjct: 418 ATAILETA-------------DADRAAVAARVSGAEVALADALEAEASRDGVEGTAEVAC 464 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 ++ + E L + Q D + + L GQ Sbjct: 465 DRLRLARRVVEDELTVTRLVAHAADARSAAQDARDHEQDIVARRLSQMAAELAESLVDGQ 524 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 CP+CG+ HPA E LD Q Sbjct: 525 SCPVCGAHEHPAPA------------------------REGDRVGPSALDDARLQHAALS 560 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQ 624 Q + L++ D+ + ER+ + R + + Sbjct: 561 RAHQQSEAAAASAQALLTEALKVLDVDAARDLDLAGLAVEVESAERRRSTVRARADKRA- 619 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 A + + + ++++ + T A ++ + A A + + +E Sbjct: 620 --ASEKVLATARTEVQRLDAAVTTAQQALARATTMAEQAQQAEAADAAAAHALLEAHSEC 677 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 L L T ++ + Q H++ + ++ Sbjct: 678 PCLSASEGTLAGRAATNTRTSVAGDAVP--AIHTLVQAHQRLTTVAQTWDEALRRSDETL 735 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 A A + F AA++ L +L + + R A ++ Sbjct: 736 ARFTSATEVGLAAAVEAGFASLDEASAAMVAPAALDRLRDRLHDHDRARASATAVLGDAD 795 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 A+ A + ++ Q L ++Q E + R + Sbjct: 796 VIAAE---------SAPAPDLAELTSAAQQARSALLTAQSAQTEASAARRSFTAVRSRLV 846 Query: 865 TLMQQIAQMTQQVEDWGYLNSLI-----GSKEGDKFRKFAQGLTLDNLVHLANQQLTRL- 918 + L + + F LD + LAN++L + Sbjct: 847 AGLDAAGPALMHHHRIKELADTFTGGGLNNTLRMRLTSFVLAARLDTVARLANERLRIMG 906 Query: 919 HGRYLLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 GRY L+ R A L + V+D W R+T TLSGGE+F+ SLALAL L+D V Sbjct: 907 DGRYTLEHTDRLAARGARSGLGLRVLDQWTG-VSRETSTLSGGEAFMASLALALGLADAV 965 Query: 972 ---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 S + +LF+DEGFGTLD E+L+ + LD+L G+ +GV+SHV ++ RI Q+ Sbjct: 966 REESGGFDLGTLFVDEGFGTLDDESLEQVISVLDSLREGGRAVGVVSHVGELRSRITSQL 1025 Query: 1029 KVKKINGLGYSKLESTFA 1046 V+K + + A Sbjct: 1026 VVRKTANGSTVDVSTPGA 1043 >UniRef50_C6DB13 SMC domain protein n=3 Tax=Pectobacterium RepID=C6DB13_PECCP Length = 1227 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 475/1228 (38%), Positives = 630/1228 (51%), Gaps = 182/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLN+LKGEWKIDFT+EPF+SNGLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+ NDLMT +T+ECLAEVEFEVKG YRAFWSQ RARN PDGNLQ P+ ELA Sbjct: 61 LGQLSEKHNDLMTHNTSECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELALIE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K+ DK +TGLD+GRFTRSM+LSQGQFAAFLNA+PK+RA+LLEELTGT+ Sbjct: 121 GGRILCEKITDKKNRVEQITGLDFGRFTRSMMLSQGQFAAFLNAQPKDRADLLEELTGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V+++H+ A L LQ +AS + LLT EQ Q + L +E+Q ++ Sbjct: 181 IYGLISERVYDKHRQALEALNMLQTRASSIQLLTDEQRQQVEVQLAERIQQEQQGNVERE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA------------------- 281 Q +L W + + Q + Q A + ++A+PQL Sbjct: 241 QALTTLRWFEQLTQQQTSVTHTQAQHTSAESAIQQARPQLDKLANSEPAEKLRPLHQEKE 300 Query: 282 --ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ-- 337 + A+ + ++A AL + QQ E+ + +R +Q Sbjct: 301 RYRQASLTLAQQIEQLNGKLAAEQLALRTLHQQEEKAEQDVSEHKQIRQQQEQLINEQVV 360 Query: 338 ----------------------------------------SAELQQQQQSLNTWLQEHDR 357 + ++Q + + ++ Q+H Sbjct: 361 PLDHRIATLEQQKNQQQNELAKTQARLHADDAKQTLVAAEQQQAKRQLEQIQSYRQQHAH 420 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL-- 415 +QW WR QF Q ++ ++ Q+ + A L A + Sbjct: 421 HQQWGELLPLWRTQFRQLRQLQDEHQKLNQKQAQHTAESTARQQEADKLAAQQREQQKVV 480 Query: 416 ------------------------------AQHAEQRPLRQHLVALHGQIVPQQKRLAQL 445 Q +Q+ + L + Q Q R Q Sbjct: 481 DAVRQQFTQHDETRQHQDTHQPLSTLHQRFNQLMDQQATCRQLATVSDQYQRLQVRKQQH 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + Q + + +++++++LAD++TI QE I LEA+R +LQAG+ Sbjct: 541 LAKLAEAQGHIDQSEILQKQQQSEHQQRSERLADLETIYRQEVHIVKLEAERQRLQAGEA 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGST HPA+E YQAL+P Q RL AL+ +V +L A +L+A +Q ++ ++ Sbjct: 601 CPLCGSTEHPAIERYQALQPSETQRRLTALQQDVNQLTIALANTTAELNARLQQREQLQS 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPL-------------DDIQPWLDAQDEHERQL 612 E + QAL Q WQ+V+ L +T + Q E+ Sbjct: 661 ELAQCDSEHQALLQHWQSVSERLQVTYSLEQQDEIAVWLTLREAEEQAIRQQIAAREQSQ 720 Query: 613 RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG-------------------- 652 +L + +L A + + Q Q+Q L T Sbjct: 721 KLWQESKDLLTAAEALLRDLEQKIALNAQQQTSLDVTQEETTQSLQNAHQQITQQTQDIT 780 Query: 653 -----YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL--------- 698 L LP D ++ WLA R E Q+W+ ++ E + L + L L Sbjct: 781 QTLATVGLLLPDTDTQDGWLAQRDSEWQNWKAKEQEQSRLTPLLATLESDLQHLRHSVSE 840 Query: 699 ---------------------------------------ETLPQSDELPHCEETVVLENW 719 E L ++ + + Sbjct: 841 ATQHIQTQQQQLAQHLAQLNTSQQERKVLFGDKQITDVREQLQRTSQQRDDALRLAQSAR 900 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 +Q L + + QQQ + + A +F ALQ S F D+ AFL AL+DEQ Sbjct: 901 QQTETALSRLTGELASTQQQYEQSTCQHESATERFTLALQQSTFVDETAFLHALLDEQER 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 L++ K+ L + +QA TL Q + L +HQQ RP E IQQ+LA L Sbjct: 961 QTLQEFKETLHQRLQQAATLRQQAEQALLEHQQKRPASLTEDATQ-EAIQQQLAALDDTL 1019 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 + N QGE ++QL D RQ QQ L+ +IAQ Q+ +DW LNSLIGS +GDKFRKFA Sbjct: 1020 KTNLRQQGEFQRQLSDDKQQRQNQQNLLNEIAQSQQKNDDWETLNSLIGSSKGDKFRKFA 1079 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LV+LAN QL+RLH RY L+RK LE+ V+DTWQADA RDT+TLSGGESFLV Sbjct: 1080 QGLTLDHLVYLANLQLSRLHDRYQLKRKPGGDLELLVMDTWQADAERDTKTLSGGESFLV 1139 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL+LALALSDLVSHK IDSLFLDEGFGTLD+ETLD ALDALD LNASGKTIGVISHVEA Sbjct: 1140 SLSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEA 1199 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERIPVQIKV+K+NGLG S+L +AV Sbjct: 1200 MKERIPVQIKVQKVNGLGVSRLAPQYAV 1227 >UniRef50_D2LF16 Exonuclease protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LF16_RHOVA Length = 1022 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 200/1082 (18%), Positives = 366/1082 (33%), Gaps = 105/1082 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ G +DF GLF I G TG+GK+++ +A+ AL+ E + Sbjct: 1 MKPIYLVIQAFGPFAGRHVVDFRHAL--DCGLFGIYGSTGSGKSSIFNAMTFALFGEAVK 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 + S E F + YR S + R G AR Sbjct: 59 EKVDNASLRSHHAAPNLPTQVEFVFAIGDHQYRVARSPEQERPAKRGGGTTSEPHRARLF 118 Query: 120 --------------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 I KV+D L G +F + +LL QG+F FL A Sbjct: 119 DVTGKPAEALNDEAPGSLIAEGKVRDVNLKVEALLGYKAEQFRQIVLLPQGRFETFLTAD 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT--------LLTPEQ 217 +R +L EL +Y I+ + E+ A E+ + + G+ Sbjct: 179 TSQRMGILRELFDVSLYRSITERMKERADDAEKEVRRQRDVCEGLLQSAGFTGMDALAIG 238 Query: 218 VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ 277 ++ ++++ +E +L +QD+ Q+ + AL + + Sbjct: 239 IEEARKNVELKLEELTACKAQGAAAFAALQTAAQQDKSFQQYAAAISALNGLKQKADAFA 298 Query: 278 PQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ 337 + +S A+ A+ L +++ +A + + + ++R A K Sbjct: 299 VKRERVSSARKAQTLVAFDDQVRIEQKGVADLAEALANAR-----------ALRSAAEKN 347 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 A+ ++ L E ++ R + R + R+ L L L+ Sbjct: 348 YADREKAHALLAGRKDEFEQKRVRERDLLKHRETLLGTAAHRDELTSAIAALDATNTTLD 407 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 A T DE +R + L I L + ++E Sbjct: 408 AG-TRAATRARDEALRCQNALDAERGNQVQRAGLRASIAGLNADLTAALT-FETKSREIA 465 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTIC---EQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 A L + + ++ L K E +L G+PC +CGS H Sbjct: 466 TAKAGLTRQTAAFDDASRSLEAAKAAMTDAESALFRNHAALLAGRLIDGKPCLVCGSLHH 525 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 P+ E + + +++ + + L+ Sbjct: 526 PSPAEG-GDESERVAADYESAREKLRVAQDHYDRASVARATAQAHHAQIARNLAELKAPA 584 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 QA TQ + A+ + D + L+ + + + Sbjct: 585 QASTQLRDTLQAAEASLKKLGVDRDLAV------------------LEATLGKAQAAVAK 626 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 IE +Q T AL Q +Q + L Sbjct: 627 ADSDIEAARQARDAAETCKALA-----------------NQRLEQALTSIPNDLRNSPAL 669 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 ++ ++ + E + E +A + A + L AQ+ F Sbjct: 670 DRAIDEAKRAIQQYDASLRAAEEAKDKAKEAFIAADRDATNAESNLAEARRKLAAAQSAF 729 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 D A A+ +A+ A+ ++ LE+ + A V + E + Sbjct: 730 DEARAAAGL-SPEAYQASKPFIASIEALEEDIRRYATAVAIASEDVRKAEEATKDLNR-- 786 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 ++ +++ Q + + + R L+ ++ ++ + ++ Sbjct: 787 --------PDIDALKKAHDGAEQAQKFADEACHDARHVLETREKLQKDVTARLRHVEKLE 838 Query: 875 QQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-- 929 + L + K+G K FA G D ++ AN ++ + RY L R+ Sbjct: 839 AETAPVRELARYMSGKDGAKVDLETFAIGAMFDRVLEAANARMRPMTANRYTLVREPETK 898 Query: 930 ----EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 + L + V D + R T TLSGGE+F+ +LALAL LSD+V + R+D++F+ Sbjct: 899 GAGRKGLGLCVDDIYTG-RTRPTSTLSGGETFIAALALALGLSDVVESTNGAIRLDTIFI 957 Query: 983 DEGFGTLDSE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 DEGFG+LD++ TLD L AL L + +GVISHV +++ IP ++ Sbjct: 958 DEGFGSLDADNESGTLDRVLTALHNLAGQTRAVGVISHVPLVRQHIPNGFEIVPAANGSM 1017 Query: 1039 SK 1040 + Sbjct: 1018 IE 1019 >UniRef50_A0YBB3 Exonuclease SbcC, putative n=2 Tax=Gammaproteobacteria RepID=A0YBB3_9GAMM Length = 1019 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 221/1071 (20%), Positives = 418/1071 (39%), Gaps = 82/1071 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL L+ G+ +DF SN LF I G TGAGK+++LDAIC ALY +T Sbjct: 1 MKPLSLTLQAFGPFAGKESLDF--AALGSNPLFLINGATGAGKSSILDAICFALYGQTTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV------PRV 114 + + +EF + + YR + + + G Sbjct: 59 AERDPAQMRCDFSEPSLLTEVNLEFALGTKHYRVRRVPQQNKPKTHGEGITNHAPEAQFW 118 Query: 115 ELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 EL DG +L K V D + L GLD +F + M+L QG+F L A +R ++ Sbjct: 119 ELDGTKDGNLLVSKKVTDATQAIKELIGLDVEQFRQVMVLPQGKFRELLLADSSDRQKIF 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP--------EQVQSLTASL 225 +L IY +I + + + +E Q Q G+ + +L L Sbjct: 179 SQLFQASIYKRIEESLKSRASGIKQAVENHQNQIRGILQAAEVNTENEVANSLATLAPEL 238 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 V D + ++ + + E S +Q+ L + + +E + L Sbjct: 239 SVALDVRTKAEAEKKASETAKEQAEWLVNRLDEFSYKQKQLAEYVEQESVINAKQQKLDK 298 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 A AR ++P + + +L + + + + + + + + Sbjct: 299 AINARAVKPMFASMQAEEGSLDSLEKALASSADQWKQAELRQVTSVQAFN----LAKTNA 354 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + L ++ Q + + + T E L + LT +Q+ L Sbjct: 355 KELGELTKQQLTLEQLEKQYHELQQAQGRLTIADEDLNASKMVLTQNQQQQATLNNELE- 413 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 A++ L E +Q L++ + ++++L +++ E+ + + Sbjct: 414 -VAEQSNQTLQGELENLAGQQILLSQLDTQLAERRQLE----ISRDLETERAESEIICQQ 468 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + +E +Q E +L+ +PCP+CGS HP+ A + Sbjct: 469 DYRVAQESFKQAEVSAKKTEMSWHAGQAALLSRELKHDEPCPVCGSVEHPSPAADNSELT 528 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 ++ V K T R +D + L + R + + L + Sbjct: 529 D---------KSAVDKARAVAETARRVMDNSREGLDTAASALTQTRAERERLAILLGPLA 579 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + + + + L L + +LQ Q+ A I Q + + + Sbjct: 580 S---------EPLAVLQAKHSANVEALNTLLAKQDLQRQLQARLAVIKAEQVLLTKTLET 630 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L ++ + ++ A Q Q ++ A+ ++ ++ + L Q+ Sbjct: 631 LAGEVSEHN------EKVVRIRAGVDQLLSVLSQVLHKPDAITEQLAEVALHMRRLSQTL 684 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E+ + +C +Q L++Q + A+ +A A + AL S+F Sbjct: 685 EVAEKAQA-------DTRSECDKAAAQHAALEKQLIEQAKQTSEATAAWHEALADSLFVT 737 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 F A++ E +L+ + + + V Q +A+ + Sbjct: 738 VDDFRLAVLAENEQLELKLTIEGYRTELSAIKGAVQQIQADIAER----------TRPDL 787 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 I+ L + ++ + T + + Q D + + + ++ + + + G L+ Sbjct: 788 IAIEAALNEKNELYKSADTLWRTLEARSNQLKDIQVKLERAHEKNELLEAEYKITGTLSD 847 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVE 935 + + G+K ++F + LD+++ A+Q+L + GRY L RK LE+E Sbjct: 848 VANGQTGNKISLQRFVLSVLLDDVLIQASQRLNLMSKGRYQLVRKEDRAKGNKASGLELE 907 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D++ R TLSGGESFL +L+LAL LSD+V + ++D+LF+DEGFG+LD E Sbjct: 908 VEDSYSG-KTRSVATLSGGESFLAALSLALGLSDVVQSYAGGIKLDALFIDEGFGSLDPE 966 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 +LD A+ L L ASG+ IG+ISHV +KE++ +++ V+ + + Sbjct: 967 SLDLAVRTLIDLQASGRMIGIISHVTELKEQMALRVDVESGRVGSHITINV 1017 >UniRef50_C0BYS9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYS9_9CLOT Length = 1053 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 189/1086 (17%), Positives = 391/1086 (36%), Gaps = 83/1086 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + S G ++DFTR +G+F ITG TGAGKTT+ DA+ ALY +T Sbjct: 1 MRPIKLVMSAFGSYAGRTELDFTR---VQSGIFLITGDTGAGKTTIFDAVTYALYDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-------LQVPR 113 + E E F + + Y + R ++ Sbjct: 58 GRRDGSMMRSQYASEDVETYVEYTFSYRRDVYTVRRNPEYIRLGKRRRADGSPRFVKEAP 117 Query: 114 VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DGK+ K ++ + A + GLD +FT+ +++QG F L+A+ +ER ++ Sbjct: 118 KVELTLPDGKVFQGKKREIDQKIADIIGLDADQFTQIAMIAQGDFLKLLHAQSRERKKIF 177 Query: 174 EELTGTEIYGQISAMVFEQHK----SARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT 229 + T Y ++ + Q ++ ++ + ++ ++L+ L Sbjct: 178 SRIFHTRFYYRVQEELKRQSTSLYIELEDNVKSVRREIGRAECEADSAYETEWSALKGLP 237 Query: 230 -------------------DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL 270 ++EK+ + Q L+ L + + +R QA ++A Sbjct: 238 IPDREETLRLLGLIIKEGGEKEKRRRAEADRLQGRLDELHGAMKEGETVNRLFQAYEEAC 297 Query: 271 AEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 + + + A + ER+ A IR EE L Sbjct: 298 ETGMRLRERKEAFREKEAGIACARRVERVRAKEAEFETIRAAAEESGQSLLRLERKEKES 357 Query: 331 RHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT 390 A + A+ + ++ L+ E+ + +Q +R+ L ++ Sbjct: 358 AAAAREAYAQEEAAREELSRKEPEYTETLVRLGDALRQYDALKEQEEERDRLSALLCKMR 417 Query: 391 HAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQ 450 +K A A + A + R L A G + + L L+ + Q Sbjct: 418 DECEKAAAEADRLEVYVRGLRKE-QEELAGSQAERDRLSAKAGILTDRASALEALEQSAQ 476 Query: 451 NVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG 510 ++ +T + + + V + + L+ G+PCP+CG Sbjct: 477 HIRAFETACREK-QQNEAECSAAYVEASAVYEQKYRAFLDEQAGVLAGVLEEGKPCPVCG 535 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 S HPA P Q + A + + + L +L+ + + Sbjct: 536 SCGHPAPAHLSDDAPS--QEEVEAAKERRNQAELVRESAAQALGEAAGRLRTEREVFERE 593 Query: 571 RQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQ 630 + A I + + D + R + + + +Q + + Sbjct: 594 CRKILGPGAGADPAEAEAEIRREAGACRREAEDTKQALCRAQKNVKRYAAVQEEYEKQER 653 Query: 631 QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 ++ +++ +Q L Y+ +E+++ L Sbjct: 654 ELSLKNNALKESRQKLQELEREYSRQNALAEEKKNKLE-------------------YRS 694 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + + E E + + + ++ +++ +KA Sbjct: 695 KDEAEKRRNEVYGLLEELRERCAKARERYERALQDQRRTEGERSGEEKRGRQLDVQRRKA 754 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 + F AL F + + A ++ ++E + +Q R + + + Sbjct: 755 EEGFREALAQEAFASAKEYEAKKPLLESAKEMESALEQYLSQVRDNEAALKLLGSQIEGK 814 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 ++ VE ++ E + +K+R+ Q + ++ + R++ + ++ Sbjct: 815 ER----------ADVEALKLEAEELSRKIRDIRGGQIRLGGMNSKNREIREELRKEFEKK 864 Query: 871 AQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-YLLQ 925 + +Q E G L+ F + Q ++ AN++L ++ ++LQ Sbjct: 865 GGLQRQYELVGNLSRTANGNLSGAVKLDFETYVQRQYFKQIIQAANKRLIQMTNNEFILQ 924 Query: 926 RKA--------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 + L+++V+ + VRD +TLSGGESF+ SL++AL L+D+V + Sbjct: 925 CRDVKSLGSQGQAGLDLDVL-HLLSGTVRDVKTLSGGESFMASLSMALGLADIVQNTAGA 983 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +D++F+DEGFG+LD + + A+ L+ L + +G+ISHV +KE+I ++ V K Sbjct: 984 VHLDTMFVDEGFGSLDDGSREQAIKVLNELAGDSRLVGIISHVNELKEQIDNKLIVTKTE 1043 Query: 1035 GLGYSK 1040 + Sbjct: 1044 KGSSVR 1049 >UniRef50_Q1QYF3 SMC protein-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYF3_CHRSD Length = 1101 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 269/1103 (24%), Positives = 430/1103 (38%), Gaps = 63/1103 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LRL NL S+ G ++DFT P GLFAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MKILALRLANLASIPGPLELDFTAAPLRDAGLFAITGPTGAGKSTLLDALCLALYGGTPR 60 Query: 61 LSN----------------VSQSQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARN 103 L + L+ R TA AEV+F G YRA W+ RAR Sbjct: 61 LRQAPGREAPLPDVEGETLNTADPRTLLRRGTASGHAEVDFLGRDGRRYRARWAVRRARE 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + DG LQ L ++L + ++ L GL + +FTR++LL+Q +FAAFL Sbjct: 121 KADGKLQKIEQSLTDLDSDRLLTTQKREFDRLLPERLGLSFEQFTRAVLLAQSEFAAFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A ER++LLE LTGT Y IS + + A+ ++ L+ + + E L Sbjct: 181 ADDNERSDLLERLTGTAEYSAISIAAYRRASDAKRAVDALETRLADDLPADSEARAELER 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 Q E + + + W +L+ Q+ + A A + PQ A Sbjct: 241 HAQQTQAELDAVQRQARHLEAQAQWHATDAKLRDARDHGQREHRDAEAHWQTLAPQRADR 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + R R AE +A + + L + + L Q Sbjct: 301 EWRRLIAPQRHRLTRQAELPHEIARLEKTHAATREDLARAETAQHGATRARDEAEQALAQ 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + R+ + A Q ++ + + L ++ Sbjct: 361 TDAARQHAEPTLRQAREQAQQLATQEQQLAELEQRHAERHRQSEALAARHRQARETQQRQ 420 Query: 404 LTLTADEVATALAQHAEQRPLRQ--------------------HLVALHGQIVPQQKRLA 443 D AT + + L + + Sbjct: 421 RQQRDDWQATLRQSMGDHARVADARQAAQQAHDQAAQRHLALGELHSRWQDVQRADDAHR 480 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEA--RIKTLEAQRAQLQ 501 L + TQ + RQR + + V+ + E+ R +++ R LQ Sbjct: 481 TLTERLDADTQRRETLLTQGQAARQRRDDCDRHYRTVREMVERNRAVRSESVTRLREHLQ 540 Query: 502 AGQPCPLCGSTSHP-AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 GQPCP+CG HP + E ++ E ++ + + + Q D + Sbjct: 541 DGQPCPVCGGLDHPWRHAPPASPESAQLAAQQAEEERQLTQAQQALDDAQQQRDELLGHY 600 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 + E RQD ++ QA +L+ L ++ + +R Sbjct: 601 RALETSLTQQRQDLADADKRRQAAHRALDAH--ALGAELAAIEPPARDDWLVRQRQDADA 658 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 + Q A + Q ++++E + L + A Q + LA + ++ Sbjct: 659 TRQQHAHLLHTLSQAERELEPLDEALRQSELTLAQLDAQRTGLDQELAQLTERLPPLREA 718 Query: 681 Q----NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTL 736 + +L L ++L + + L + L Q Q Sbjct: 719 RDACAAQLAGLLGEHASPDAWQQSLDAARDSARQARDAALTRLHDAQQHRQTLAQQAQHE 778 Query: 737 QQQDVLAAQSLQKAQAQFDTALQASV-FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 ++ D E + + E+ + E R++ Sbjct: 779 SERLDALRDEKSILDRDLAEWRAMHPDLSDALLERLLAQTEDEIQRQERQLEETERTRQR 838 Query: 796 AQTLVTQTAETLAQHQQHRP---DDGLALTVTVEQIQQELAQTHQKLRENTTSQG----- 847 + + + + L H++ + +D + + + E+A+ L Sbjct: 839 TEATLAERRQALIAHRRDQELVAEDADETALLGDAAEAEIARRRLALDHAREELAPRHDA 898 Query: 848 ------EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG 901 L D R++QQ ++ + WG ++ LIGS +G FR+ AQ Sbjct: 899 AQAARDHAAHALHDDDRRRERQQAGQAELEAARHEYRRWGRISELIGSADGKVFRRIAQA 958 Query: 902 LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL 961 L+ L+ AN L L RY L R SE L + V+D D R +LSGGE+FLVSL Sbjct: 959 YNLEQLLEHANAHLQGLSRRYRLMRGGSE-LGLLVIDHDMGDERRSVHSLSGGETFLVSL 1017 Query: 962 ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK 1021 ALAL L+ + S + I+SLF+DEGFG+LD ++L A++ALD L A G+ +GVISHV+ M Sbjct: 1018 ALALGLASMASGELTIESLFIDEGFGSLDPQSLALAMEALDGLQALGRRVGVISHVQEMH 1077 Query: 1022 ERIPVQIKVKK-INGLGYSKLES 1043 ERIPVQI+V+ NG ++L S Sbjct: 1078 ERIPVQIQVEPLGNGTSRARLVS 1100 >UniRef50_B6XA37 Putative uncharacterized protein n=3 Tax=Providencia RepID=B6XA37_9ENTR Length = 1227 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 465/1228 (37%), Positives = 640/1228 (52%), Gaps = 183/1228 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT EPFASNGLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+S+N+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+ DGNLQ P+ ELA A Sbjct: 61 LGQISKSKNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRANNKADGNLQDPKAELATVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG+I+A+KV + E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGQIIAEKVSEIREKIVQITGLDFGRFTKSILLSQGDFAAFLNATEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS +F QHK A+T+L+ L+AQAS V LLT + Q L Q + +E+QL ++ Sbjct: 181 IYSQISVYIFNQHKQAKTDLDLLRAQASSVNLLTEIEYQELVEKQQQYSAQEQQLSQSKL 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + QQ++ W + +L Q R Q A QQA + A+PQL L+ + PA LRP W + Sbjct: 241 RHQQAVTWHQQYQQLAQNTQRLQLAQQQAQQRYQVAEPQLHKLAQSSPAEALRPDWLAVQ 300 Query: 301 EHSAALAH----------------------------------------------IRQQIE 314 L I ++ Sbjct: 301 SLQTQLDEQTQKQQRITQHLEEAQKQRLPLVTQHAQAQLEQNQYNEWVQKTTVMIDNEVR 360 Query: 315 EVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 ++ RL + + ++ ++E Q++ S+ Q+ D + N+ + + + Sbjct: 361 PLDNRLSQLNQQKLQLSEQLSQLNSEYLQKKASVENAQQQIDHAKSGLNKTQLFLQEHAN 420 Query: 375 QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVA---- 430 L +WQQQ + L A ++ Q A+ + L++H A Sbjct: 421 DAQIITQLGRWQQQGQFVYELTEQLTKNQQKQHAIKLEWQTLQQAQLQKLKEHQKAQLSL 480 Query: 431 ---------------------------------------------LHGQIVPQQKRLAQL 445 L Q + +++ Sbjct: 481 ETFHSRFNQLEKQFQEYKEKHDISAINALIIQLQAQLQHAQILPLLLSQHEEKHQQVQLH 540 Query: 446 QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQP 505 + + Q + + R + Q ++ + E +I +LE +R QL G P Sbjct: 541 IQQQNQLAESIQQVEKLIAITQDRVTQLEPQRQVLEQKLQLEQKIVSLEHERQQLIEGTP 600 Query: 506 CPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CPLCGS HPA+EAY A+ P Q +L+AL +++ ++ + L A ++ Q +E Sbjct: 601 CPLCGSLKHPALEAYHAVTPNETQQQLVALNTQIESEKQQLTEHQALLQADKRRQQDNEA 660 Query: 566 EAQSLRQDEQALTQQWQAVTAS---------LNITLQPLDDIQPWLDAQDEHERQLRLLS 616 + L+ AL QW+ Q L D++ L Q + L Sbjct: 661 TQKQLQVQLDALNTQWRQACKQALTPELAKTHLAVEQCLLDLRNQLTVQQTITSEFTQLE 720 Query: 617 QRHELQ-----------------------------GQIAAHNQQIIQYQQQIEQRQQLLL 647 ++H+ Q+ + + +Q+IEQ+ Q L Sbjct: 721 RQHQEAKNHYYEQQAQTKQLLSELSLLDEKLKYHSQQLDENQAEQHALKQRIEQQTQQLA 780 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 T+L+ + LTLP +++ SWL +Q Q ++ ++ I+ L + Sbjct: 781 TSLSPFNLTLPSQEQFSSWLKEIEQRGQYYEAQKTAAQQFAKSIEVHAATLAAETTYAQQ 840 Query: 708 PHCEETVVLENWRQVHEQC----------------------------------------- 726 + +++ Q+++Q Sbjct: 841 IERQLASQQQHFEQLNQQIGHANTQRQNMLDGQAITVFTQNMQVQQAQYARKVDELTLQI 900 Query: 727 -------LALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 AL Q L +Q Q AQAQF AL+ S FD Q+ FL AL+ + Sbjct: 901 SEIDKHIAALTGSAQELDEQLKQLNQRQSVAQAQFIDALKNSPFDTQEQFLNALLPAEEK 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QLEQLKQ + Q+ +A+T ++ +LA H+Q R + L ++E IQ L + K+ Sbjct: 961 IQLEQLKQQVTQQQLEAETRYQESLLSLANHEQQRLVEFAEL--SLEHIQHVLTELDNKI 1018 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 +E QG+I QL++D R QQ+ L+ +I Q +DW YLNSLIGS EGDKFR++A Sbjct: 1019 KELNQQQGQIINQLERDQQQRHQQRELLNKIEQSQLSYDDWSYLNSLIGSAEGDKFRRYA 1078 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD LV LANQQL +LHGRYLLQR LE++V+D WQAD++RD +TLSGGESFLV Sbjct: 1079 QGLTLDCLVSLANQQLDKLHGRYLLQRSHLANLELQVIDGWQADSIRDIKTLSGGESFLV 1138 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SL+LALALSD+VSH+T+++SLFLDEGFGTLD+ETLD ALDAL++LNASGKTIGVISHVEA Sbjct: 1139 SLSLALALSDMVSHRTQLESLFLDEGFGTLDAETLDIALDALESLNASGKTIGVISHVEA 1198 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERIPVQI VKK NGLGYS+L S + V Sbjct: 1199 MKERIPVQITVKKANGLGYSELSSHYRV 1226 >UniRef50_A7VIT4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIT4_9CLOT Length = 1004 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 206/1068 (19%), Positives = 408/1068 (38%), Gaps = 90/1068 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ + + +IDF + F GLF I+G TG+GKTT+ D I ALY ET Sbjct: 4 MRPLVLTMEAFGTYIEKTEIDFRK--FGKQGLFLISGDTGSGKTTIFDGIMYALYGETSA 61 Query: 61 L------SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV 114 + E+ FE G Y+ + S R G + + Sbjct: 62 GSGKNNTGRNGEMLRSDFADPKQLTYVELLFESGGHEYKVWRSPAYERP---GYKSMKQA 118 Query: 115 ELARCADGKILADKVKDKLEL--------TATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 E+ DG+ K D + GL +F + +++QG F L A Sbjct: 119 EVRWMEDGQETELKAADIDGKRTAGVIGRVREVLGLTADQFRQVAMIAQGDFKKLLVADT 178 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 K R+++ + + T+IY I + + K A +L A+ T+ E Sbjct: 179 KTRSDIFKTIFDTKIYEYIQNRIAQDCKEAEGVYTELVAKVDR-TIEGVELPDETELYKT 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASR-RQQALQQALAEEEKAQPQLAALSL 285 L D + L L L ++++++ ++ ++ + A+ Sbjct: 238 GLQDLPEHLENRHLAFDDILEELHSLNQIEEKQAKDLHHQIESYTQTNNQYDNWYTAIEK 297 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + + ++ H A ++Q+ + S A + L +Q Sbjct: 298 NKRI--IGQTYDGYVAHLDAYRQVKQEFVSAEAQNHSMEAQS----------TEPLMLRQ 345 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 L R + E Q R+ + +++L ++L + Sbjct: 346 AELQKQADSFVRLNEMEKELLLVEQVCHQAGKKRQDILATKKKLQKQTEELEQI------ 399 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 + + + + QI + +RL +L+ + + ++ + + Sbjct: 400 ---------VNPGDTSQVKLEKVQTEKKQIAERMQRLQELEKECLEIDHLEIKKQQMVVD 450 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 R ++++ Q A+ + + + A LQ G PCP+CGS +HP Sbjct: 451 NRSAFEKRNQANANYEEAI-RNRNDQICGELAANLQEGTPCPVCGSKTHPEKAHCDG--A 507 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 V + + L + +L ++ +L+ N+ + + A T Q Sbjct: 508 VVTEEMVKKLRAAFDQADASFRRKENELGSLNGRLEEKRNQTTAAVMEMAAFTIPDQTAQ 567 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 A + I + W +E E +LR L + H H +Q+ + + QI++ ++ Sbjct: 568 ADVLID-EVRKLHVIWEKRTEETEARLRTLEKEHR---SYQEHKRQLGELRLQIKELEET 623 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + Y +++ A +QE ++ + L+ + Sbjct: 624 EVRVTEEYQEADRSYTAKQAAAAQMRQE-------------IRGDESDILKQLQQVRNEI 670 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + ++T + + ++ ++ AL + + + + + + + +AL+ D Sbjct: 671 AEVNRKKTEARDTYNKLAKELSALETNLKRDAEDQNMQYRQEWQLEKDVLSALE----TD 726 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 ++ DE + +L ++ + + + + + TV + Sbjct: 727 SGEMNTSVNDESVIQKLP------DSNQENDFADEQELEKQAGGYGECYTHFCTTSTVLL 780 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 EQI ++ +T +K I ++L ++ + + + ++ L+ Sbjct: 781 EQISGQIERTIRKKNSVAIRHDAIAERLVKNKAAYSKLKKDYGAYLNIYKKYSKLQDLSQ 840 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK----ASEALEVEVVDTW 940 K + Q + D ++ AN +L ++ ++ L+R + L++ V+D Sbjct: 841 AALGN--YKLETYIQEVYFDRIIDSANHRLRQIVCNQFELKRGQKTAGNRGLDLFVLDHR 898 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSH---KTRIDSLFLDEGFGTLDSETLDTA 997 RD +TLSGGE+F+ SL++AL L+D+VS RID+LF+DEGFG+LDS+ L+ A Sbjct: 899 TGKE-RDVKTLSGGEAFVASLSMALGLADIVSANAAGVRIDTLFIDEGFGSLDSDILEQA 957 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 L+ L L+ S +G+ISHVE +K RI QI V K + G S +E Sbjct: 958 LNVLAELSESDHLVGIISHVEELKHRIDRQILVTKDHQGG-SHVEIQV 1004 >UniRef50_Q8CPC5 Nuclease sbcCD subunit C n=7 Tax=Staphylococcus RepID=SBCC_STAES Length = 1009 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 182/1076 (16%), Positives = 414/1076 (38%), Gaps = 103/1076 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + ++N E IDF + LF I+G TG+GKT + DAI ALY Sbjct: 1 MKPLHIVMENFGPFIKET-IDFEQVETDQ--LFLISGKTGSGKTMIFDAIVYALYGMAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + +F+V + ++ + Q Sbjct: 58 KTRKEGDLRSHFADGKSPMSVIYQFKVNNQTFKIHREAPFIKEGNITKTQAKLNIYELVD 117 Query: 121 DG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + ++ KV + L G++ +F + +L QG+F FL + K++ +L L + Sbjct: 118 NQFELRESKVNQGNQFIVQLLGVNAEQFRQLFILPQGEFKKFLQSNSKDKQSILRTLFNS 177 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT---------- 229 E + +I ++ E K + ++E Q + A + L Sbjct: 178 ERFDEIRHLLLENVKQEKVQIENRYTQIENLWNDIDTFNNDELALYKELESSQTDKMIKK 237 Query: 230 ---------DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 K A+ + + L+ L + ++ E S + L+ + + + + Sbjct: 238 FPQFNDYGCKILKSFEEAKNKITKELDDLNHKYKVNVELSENTKKLKAEKIKFDDLKKEQ 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA---AKQ 337 + + + + + + L +++ +E+ + + + + + KQ Sbjct: 298 NYIDKLKQELKMIQESKVLITYFTRLQSLKKDKDELVSLHEQSKLNETNYHNEIKGFQKQ 357 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 L ++ + + Q ++ + + N+ + + Q+ E +++ + K Sbjct: 358 LEHLSTRENEITQFNQYLEKNQVFFNQLDKIISSYQQKPVIEEEIKRLYSEYNDLITKKE 417 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 L D + + E+ + ++ + +K +LQ+ + + Sbjct: 418 ELTKEMNNKNKDFA--IIEHYTEEIYKLKKIIDESERQKKDEKLFDKLQLDKSSYLSKLK 475 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 ++ LNE+ L D+ + IK+ + G CP+CG+ H Sbjct: 476 EKKEQLNEIESSITNIDATLIDLNDKKDFVNEIKSA------MSIGDTCPICGNEIHSLG 529 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E +++ LE++ K+ +E + +++ Sbjct: 530 EHIDFESIAQKNNKIKRLESKKVKIRDEIIKIETRIE----------------------- 566 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 L+ + L+ + + ++ + L ++ Q+ Q I + + Sbjct: 567 ----------------ELNHRENELNCEKQEKKDISKLQKQLNHLNQLKDEQQSINKLVE 610 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 E++++ ++ + + L L +++ ++ L + + + Q + + Sbjct: 611 NFEKQEKEIVNKIHQFDLDLSRKNTQKEKLEIQINDFERHSQF--------SSVNDFETY 662 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 + E E + +++ + + Q+ L + ++ + + + + Sbjct: 663 YSHAKKQVETYEYENEKTKDKLNELNNKLKIEMNDQKHLTENLTQTSKEINNLELKMEKE 722 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 +Q F+ +A ++E+ + + + + E + + Sbjct: 723 MQQLGFESYDQVKSAADLSAQKDEIEREINIYNKNYQSYEIEINRLKELVKGKKLL---- 778 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 +E+++Q + +T+ KL E + I ++ +++ + + ++Q + + Sbjct: 779 ------NLEKLRQSIEKTNLKLDETNSQIATISYKIDNNSNKFNKIKNIIQILDDELKVQ 832 Query: 878 EDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS----- 929 ++ L+ ++ K K + L+ ++ ANQ+L+ + G RY L R+ + Sbjct: 833 KEIFLLSEILAGKNDYKLTLENYVLIYYLEKIIFQANQRLSFMSGNRYQLIRREAISLGL 892 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 LE++V D ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGF Sbjct: 893 SGLEIDVFDFH-SNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLDSMFIDEGF 951 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 GTLD ETL+TA+D L L +SG+ +G+ISHV +K+RIP+ ++V +++ Sbjct: 952 GTLDQETLETAIDTLINLKSSGRMVGIISHVSELKQRIPLILEVTSNQYESHTQFR 1007 >UniRef50_A6BHS1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHS1_9FIRM Length = 1067 Score = 367 bits (943), Expect = e-99, Method: Composition-based stats. Identities = 199/1107 (17%), Positives = 398/1107 (35%), Gaps = 110/1107 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + S G+ +IDFT P NGLF ITG TGAGKTT+ DAI ALY T Sbjct: 1 MRPVKLIMSAFGSYAGKTEIDFTEIP---NGLFLITGDTGAGKTTVFDAITYALYDRTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 + + E F + + Y+ + R + Sbjct: 58 GTRDGNMMRSQYAGEETSTYVEYTFLYQKKEYKIRRNPEYLRLGKRRYADGSPRYVKETP 117 Query: 119 -----CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DG I K ++ + + + GLD +FT+ +++QG+F L A+ +ER ++ Sbjct: 118 KVELTLPDGSIFKGKKRETDQKISEIIGLDADQFTQISMIAQGEFLKLLLAESRERKKIF 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQAS----------------------GVT 211 + T Y +I + +Q +LE+ + + Sbjct: 178 SRIFQTRFYYRIQEELKKQAVQLYVKLEQNLQEMKLEMARVEYPSYKKDGGVWPEEVQLE 237 Query: 212 LLTPEQV--------------------QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTR 251 T E L + EK + Q L R Sbjct: 238 KCTEENELIKQWKVIAGQDIPDRERISVILKEIIDQGNRWEKVCKKESSRAQTVLEDKNR 297 Query: 252 QDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQ 311 + + ++ + ++ L+ E+ P+ A R+ + + Sbjct: 298 LLKEAELLNQLFDSYERVLSRLEEKMPEKAKYEFLTGRIQTGKKAGRVLQEEKRYLEEEK 357 Query: 312 QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQ 371 ++ E+ + +S R + + +Q+++ ++ + Q Sbjct: 358 RLTELEVQERSLQKELQECRKQLQELT---DKQKEAGREKTEKETVLTEKKVRIQDAILQ 414 Query: 372 FSQQTSDREHLRQWQQQLTHAEQKLNAL--AAITLTLTADEVATALAQHAEQRPLRQHLV 429 + + +E L + +++ + + + L E+ T L ++ + Sbjct: 415 YQSMNAKKEELDKITKEIKNYLNQSETILQKKEILQNNQKEILTFLKKYEKIETCINECR 474 Query: 430 ALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEAR 489 I Q + L + + + A E + K A+ + + Sbjct: 475 NQKKHIEEQIRHYEDLDHQEERKEELKEDCERAKKEADREQKNYENAWAE-YEMKYHKFL 533 Query: 490 IKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATL 549 + L+ GQPCP+CGS HP + A P + L E ++ + Sbjct: 534 NEQAGILALNLEDGQPCPVCGSREHPQIAALSDEAPTQAEVELAKAE------RDKKEKI 587 Query: 550 RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHE 609 R ++ AQ + Q + + + + ++ + + Sbjct: 588 RDIKTEAFRKCLAGYQAAQEICLTLQKNIKDEAEDITGIGWKEKIQSLKRTLMETEKRLK 647 Query: 610 RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 + + + L+ QI + +++ + Q L + Y + E L Sbjct: 648 QLEEIFERCRTLKENQEQIADQIEKLEEKERKTSQSLTESKLMYTKLEAEYQAMEEKLP- 706 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 +++ L + EL V + + + L Sbjct: 707 ------------------YKTMEEAEEHLREITGKLELVRNNYETVTRSLTEKQNKEKEL 748 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 QQ+T+ V + + +QK + ++ F+D++++ + M E+ L + EQ Sbjct: 749 EGQQKTVSASVVQSQEEVQKKIRSYKQIIKEQGFEDEESYHSQCMTERELEEAEQWIGAY 808 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + + ++ + T + L ++ EQI +E+ + +L E ++ Sbjct: 809 QKELQELEANRTLLEQQLEGKERK----------DTEQIAREIKEASGELEEIRKEYMKL 858 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLD 905 +++ + R + ++ + + +Q E G L+ F + Q Sbjct: 859 HNTNERNREIRDNLKRNFEKNSGLQKQYEIVGNLSKTANGNLSGSAKLDFETYIQRQYFR 918 Query: 906 NLVHLANQQLTRL-HGRYLLQRKA--------SEALEVEVVDTWQADAVRDTRTLSGGES 956 ++ AN++L R+ G +++Q + L+++V D VRD +TLSGGES Sbjct: 919 QIIRAANKRLVRMTSGEFIMQCRDVEKLGSQGQAGLDLDVY-HMATDTVRDVKTLSGGES 977 Query: 957 FLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGV 1013 F+ +L++AL LSD+V + +D++F+DEGFG+LD + D A+ L+ L + IG+ Sbjct: 978 FMAALSMALGLSDIVQNTAGAIHLDTMFIDEGFGSLDDVSRDQAIRVLNDLADKDRLIGI 1037 Query: 1014 ISHVEAMKERIPVQIKVKKINGLGYSK 1040 ISHV +KE+I ++ VKK Sbjct: 1038 ISHVNELKEQIDHKLVVKKNEKGSSVS 1064 >UniRef50_Q1WSF5 Exonuclease n=2 Tax=Lactobacillus salivarius RepID=Q1WSF5_LACS1 Length = 1033 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 202/1073 (18%), Positives = 418/1073 (38%), Gaps = 68/1073 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L LR+K E ++FT F + LF I+G TG+GKTT+ DA+ AL+ T Sbjct: 1 MKPLKLRMKYFGPYIDET-MNFTE--FDNTPLFLISGKTGSGKTTIFDAMSFALFDHTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 ++ FE G Y S + GN +V+ Sbjct: 58 DERDAKQMRSDFATPNDATEVTFVFEHNGIKYTVIRSPKMNLAKKRGNGTRDVEASVKVK 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 I K + L GLD +FT+ +LL QG+F FLNA +R ++L + Sbjct: 118 YINKEQENIEITKKNQADKFLRDLIGLDAQQFTQIVLLPQGKFRNFLNANSADREKILRK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL----------TPEQVQSLTASL 225 L GT +Y + + + EQ K +E EKL Q + E + + + Sbjct: 178 LFGTSLYQKWTEKIQEQAKIIESENEKLTTQIQTIRQQVEIEDNDETNDEEWIVKVNNQI 237 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 + +++++ Q+ L+ L + ++ + + + + + + + + L Sbjct: 238 EEKKKKQEKVNNDITISQKQLDNLVETYQNEKVLADSIKQKEDYIHKLQSLENNQDKIEL 297 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + +++ + + QI+E + +L + E Q+ + Sbjct: 298 KKIYAYRLAWYQKNQQIFNNKTDLELQIKEKSDKLVLLNQESKFLIQKHETAKIEAQELE 357 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + ++ + ++ Q E + Q + ++ + L ++ Sbjct: 358 KQQENIEDLKNKISTLEVKLPVYQDVKVNQEKMSELTKNHQDTKNNLDKSVKELEKQKVS 417 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 D++ LA+ + LV + ++ +++ L + + + + + L + Sbjct: 418 Y--DDLGKELAKLENLDEKQVELVNENNKLTRLSEKI-DLVDHLDSEIESKKLQKEKLEK 474 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 Q +E Q+ D + + QL G+PCP+CGS HP LE Sbjct: 475 KYQEQEELVQESTDTEEKLNTLWIKNQIYFLAKQLAPGEPCPVCGSKEHPLPAEIDELE- 533 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 E +VK ++ R + +L +E L Q+++ + + Sbjct: 534 -------QVTEEDVKLANKKAEVERSKAKEFKLRLTSIIDEITELEQNKKESIDKI-LLD 585 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 L L+ + + DE++++ + L + L+ ++ ++Q I +E+ + Sbjct: 586 FELGKKHSLLELKEIFQIKNDEYQKKAKDLENKVSLKEKLKGNSQLIKNEIANLEKEKDK 645 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L L + + Q+++ +L+ ++Q+ + + Sbjct: 646 LKEQYDDVYYRLKMTE-------------TTLQEQRKQLSPEFEDVKQVEEYITDTKKRV 692 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E + + + + + + + + + Q+ + L K + T ++ S + Sbjct: 693 EDYQTNKDKITKELQDTKAELIKVQADIDSNHQELESKKKGLSKINKEITTLIENSEINL 752 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + + L + L++ + + Q + + + Sbjct: 753 E-----------EIASLAKNLARLDSINNEINSYEKQILVVKTKISELDKTINNREMPNL 801 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + + ++L +I ++ +Q+ + L+++ + + + +W L+ Sbjct: 802 VERNNVIVDKRKELATFQAEFSDITTEINHIQKIKQEVEQLLREQKENYKLMAEWKQLSD 861 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEVE 935 ++ K K ++ + L ++++AN +L L GRY Q K + LE+ Sbjct: 862 VMTGKSATKLSLERYVLQMYLQRVLNVANGRLKELTQGRYSFQIKDEKGSYSSNTGLEIN 921 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 + D A VR +TLSGGESF+ +LALALAL +++ + +D+LF+DEGFG+LDS+ Sbjct: 922 IYD-DNAGKVRPVQTLSGGESFIAALALALALGEVIQANAGGIFVDALFVDEGFGSLDSD 980 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 L AL+AL + + IG+ISHV+ ++E+IP Q+K+ G F Sbjct: 981 ALQIALEALQTIEGKNRMIGIISHVKELQEQIPFQVKISSNYGKSKISYRKDF 1033 >UniRef50_Q07GQ2 Exonuclease SbcC, putative n=3 Tax=Alphaproteobacteria RepID=Q07GQ2_ROSDO Length = 1019 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 199/1075 (18%), Positives = 361/1075 (33%), Gaps = 85/1075 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + G ++FT G+F I G TGAGKTT+ D I AL+ ++ Sbjct: 1 MRPIRLTMTAFGPYAGTEVVEFTAAL--DAGIFGIYGETGAGKTTIFDGISFALFGQSSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR------- 113 ++ T E+ F++ E Y + R G+ Sbjct: 59 AERSAEDMVCHHAHATDITKVELVFDLGDERYVVQRVPKQQRAALRGSGTTTEPHQAYLF 118 Query: 114 -------VELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 E+A G I+A+K V L G + +F + +LL QG F L A Sbjct: 119 RSTGMPLAEIAGDNLGDIVAEKQVNRVDPEIEALLGYNAAQFRQIVLLPQGDFRKILTAP 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 ER+ +L+ L ++Y + + + ++ + + E + L + Sbjct: 179 SDERSPILKRLFDVQLYERFADRIKRDAADIYRQINDERVRRDTHLGDLSE--EQLADEI 236 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 + + +E L T + E ++L + + + + +A A E+ + A+ Sbjct: 237 RSMGEEVSALETTVKAETETLVQCQKALSAGEGLAEKFEARGAAETEKATLESASEAVEE 296 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 + + + +A+ ++ TR + +S + + L + + Sbjct: 297 TKSRLAKARAAQTVLVAESAMRAAGEEAGAAQTRHATAKVSLSSAQSALSVAQEALNRTE 356 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQ-LTHAEQKLNALAAITL 404 Q + H R + + + + A + N A Sbjct: 357 QQKDNRDAAHARVLELQRFEQTLGQSHTLLADLEAARSKTKAAVAEQATAERNRTNAEQS 416 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 T + H +++A R + E + Sbjct: 417 LTTLRNLQKEHPAHVRALQEVGNVLAAVEHEAEALGRFETAKSRRDLQAGEVDRLQTEYE 476 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + L EQ+ +L G+PCP CGS HP Sbjct: 477 RRSTHLEVCKNAL----ERAEQDLTEIQALHVARKLLPGEPCPACGSLDHPNPATGDPER 532 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 G + + E + + + L A L + E +L + + Sbjct: 533 RGRHD-QFEQASREFRSAERDEIEAKTALAAARASLTERQTELDAL--------DRPERD 583 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 S + L D + L+A ++ G+ +H+ + +Q + + + Sbjct: 584 RKSFDPVLAEARDRRIALEADARFVDLESKIAMAETAAGETTSHH---ERARQDVSEARD 640 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 T Y L E + + EL A Sbjct: 641 AETRAQTSYDTLLRDVPENWRQGGALASALSAAVSARGELVA------------------ 682 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + A + + AQ+ KAQA+F L + Sbjct: 683 ------AHETATNGEKAAAVALSAAEQGVTSAVAEVDRTAQAFTKAQAEFTERLGTAGL- 735 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 D+ F A D LE+ + + + + + A ++ Sbjct: 736 DEAGFKVAKADVAQSDALEEQINSFNERVAANKAQLARLANEISNRS----------PPD 785 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 VE + KL + + +++ L+ + +++ L +IA + + G L Sbjct: 786 VEALTAAKESAQTKLETSQQTHIRLQRDLEAKFETQRKVAALSIRIAALEAEYGPVGGLA 845 Query: 885 SLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEV 934 L+ K FA D ++ ANQ+L + GRY L R + L++ Sbjct: 846 DLVNGNNERKVRLPDFAIAAMFDEVLVAANQRLGPMTGGRYQLLRPEDAVGGRQKRGLDI 905 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 V D + R T+TLSGGE F SLALAL LSD+V S ++D++F+DEGFGTLD Sbjct: 906 AVFDA-NTEKSRPTKTLSGGEGFQASLALALGLSDVVQQNSGGIKLDAIFIDEGFGTLDE 964 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 +TL+TAL+ L L +++G+ISH E +K I ++ + + A Sbjct: 965 DTLNTALETLYELTNDKRSVGLISHTEQVKSMITDGFDIEVTPSGSHIHTRRSAA 1019 >UniRef50_A9BEV5 Exonuclease sbcC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV5_PETMO Length = 1039 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 192/1071 (17%), Positives = 425/1071 (39%), Gaps = 64/1071 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L+ + E +IDF + ++ LF ITGPTGAGKTT+ DAIC ALY Sbjct: 1 MKPIKLKFQAFGPFLEEQEIDFNK--LRNDTLFLITGPTGAGKTTIFDAICYALYGNGSM 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-----VE 115 + + E EF+ K + + + R++ DG + ++ Sbjct: 59 DERGDAIARSHFADENTDTYVEFEFQFKDKIIEVSRTPSYERSKKDGEGTTKQNSQASIK 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + + + VK GL+Y +F + +++ QG+F F+ A ERAE+ ++ Sbjct: 119 IYQNGELILHETGVKKVNSKVEEYLGLNYEQFKQIVMIPQGEFRKFITANSNERAEIFKK 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQA-----------SGVTLLTPEQVQSLTAS 224 + IY + + E K+ L++ Q + L E+ Sbjct: 179 IFDISIYERFEQKIDEIFKNIEKGLKEQQQKVRNILETINLESEEYKQLLKEENIDPENL 238 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 + LT E K+ T++++ ++ + + + + + + + ++E + ++ L Sbjct: 239 IDQLTKEIKKRETSKEETEKQKSQKQDKLQKLNTNLEKIKKTNELIEKKETLKKEIEELQ 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 R + + + ++ E L + K E Q+ Sbjct: 299 QNSKYIQEREELLNRLKKAKEILPYEERYVEYLKELNDKKNQLKDQQDILDKSMEEKQRI 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + L +++ + E + + + ++++ + ++K+ Sbjct: 359 DEKLPEIEKQYQKISAVEKEIEDLNQKLDKYVEYKNLIKEYNTKKKLLDEKVKESQEKDK 418 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ--EQTQRNAA 462 L+ + + ++ L +I +K L+ +N + + Sbjct: 419 ELSETQGKLEQNEKYISENEDINVEILKNEINTNEKLLSAANELSKNYEELALLHKDYKK 478 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 + + ++ + + Q L + + + L+ G+PCP+CGS HP+ Sbjct: 479 VKKQKEEIEIEIQNLREEQNKKTTDFIKSQAYHLATTLKEGEPCPVCGSLVHPSPAKSSG 538 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 + L + ++ + +E A + + ++ + E + + + + ++ Q Sbjct: 539 KLI--TEKELEEINQKLNEKEKEKAMILRNYEDVSNKY---SQEVSLFKSEYKRICEELQ 593 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 S I + I+ D ++ +++ + + + N++I + +++E++ Sbjct: 594 IPQESEYIYTHIQNLIKILEDRLNQQKQEYGQKIKIYNKVKSLKNDNKKIKEEIKELEEQ 653 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++ L + + + + + + L + + ++ ++ Sbjct: 654 RENLRKIIDESRSKIIELETKITNLKEQLENKTE---------------NEIKSEIQEKR 698 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + E ++ E + +TL + ++ A+ +FD ++ Sbjct: 699 KFIHNIKTTYEQKREEANRISEIINSSKGTIKTLTEDITKLDDQVKNAEQKFDQMVEKMG 758 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 F +QQ + + LE Q + + + QTL+ E+ ++ Sbjct: 759 FKNQQEYKILKEQINLIETLEDEVQKYKEELKNKQTLLIDLEESTKNLKKIDETP----- 813 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 I E+ Q +++ E ++ + ++K + +T++++I + ++ Sbjct: 814 -----IANEIDQLQKEIEELIKNETNLEYEIKHLKGTKTNLETVIKEIEKQEKEYSTIKN 868 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEAL 932 L + + K+ + ++ AN +L +L GRY L R + SE L Sbjct: 869 LRDVSKGDNNTRISLSKYVLAYYFEEILAQANLRLNKLTDGRYHLHRSSKVLDARKSEGL 928 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 E+ V D + R+ +TLSGGESF +LALAL L+D+V + +D++F+DEGFG+L Sbjct: 929 EIMVFDIYTGKE-REIKTLSGGESFKAALALALGLADVVQSEAGGISLDTIFIDEGFGSL 987 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 D+ +LD+A++ L LN++G+ +G+ISHV +KERI +I+V Y K Sbjct: 988 DTNSLDSAIEVLTELNSTGRMVGIISHVSELKERIKSKIEVIPGKTGSYIK 1038 >UniRef50_A9KNM3 SMC domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KNM3_CLOPH Length = 1038 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 199/1074 (18%), Positives = 407/1074 (37%), Gaps = 70/1074 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + KGE + F + +GLF I+G TGAGKTT+ DAI AL+ Sbjct: 1 MKPLELAISGFGPFKGEVNVPFEKI--GESGLFLISGDTGAGKTTIFDAIAFALFGCASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + S + ++ F KG Y + R + G+ A Sbjct: 59 ENRTTDSMRSDYATGDDKTYVKLVFSHKGRRYEVERNPLYQRAKKRGDGFTEEKPNATLI 118 Query: 121 DGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + + + +DY +F + +++QG+F L A +ER + ++ T Sbjct: 119 KWDGSVVAGYQPVTNEIMEILSIDYKQFKQIAMIAQGEFMKLLTASSEERGVIFRKVFQT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQ----AQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 Y + + R E ++L+ SG+ L +V + L Sbjct: 179 GNYEAMQKKLKSMASELRGECDQLERSMVQYLSGILLSKENEVLEEWKRKPDIHKINDLL 238 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ-PARNLRP 294 + ++ + + +E S + L + E+ + + L + +LR Sbjct: 239 ELLELDLEEDKSRYDTLEVENKELSGKLVELTTKITLVEEQEKKKQELEQRRLLLEDLRK 298 Query: 295 HWERIAEHSAALAHIRQQIEEVN---TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 E+I + L + ++ + +V + ++ +Q + Sbjct: 299 QSEQIKLNQIDLQNAKKALYQVKPVADAYHKSRVETENLVREIIEQKKRFDIVSEETKKK 358 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI--TLTLTAD 409 E+ + +Q + +Q + L AI + Sbjct: 359 QAEYHEHEKDKARLEELAIAINQCKEELAQFENLKQLEIKIQSNLKNQDAIVSNEKKIEE 418 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN--------- 460 + H+E Q +++ +I+ + L+ I + + N Sbjct: 419 QGKLLKGDHSELTKELQGYLSIDQEILECIQIGKDLKSKITKLKSLLDELNRIELESSNL 478 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 L + + + Q E + L+ +PCP+CGST HP Sbjct: 479 KVLQQEYFKKENSYQTANKEYQTLELAYFREQAGLLAMNLKGEEPCPVCGSTKHPKKAEC 538 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 P L KL E L Q +++ Q + +L + L Sbjct: 539 SKEAPTE-----AMLNQAKVKLESETVVLNQQSLSVSNQNTKISLMWDNLCVVCEEL--- 590 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 ++ I + +++ +A + + R+L + E + +I ++ Sbjct: 591 FEESFGKDKIKDRITEELSRSEEAFLQKNEEYRVLKKNQERRDWCNKRTTEISAALEENV 650 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 Q Q L A L Q + + R ++ + ++ +N+ TAL QL LE Sbjct: 651 QNIQNLNQEKIAIATVLGQMEGSREQILER-RKYATKEECENKHTALLLESNQLRSNLER 709 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L + + ++ Q AL + + + ++ +L++ + + L Sbjct: 710 LEKE--------------FHELRSQWSALKAVIEDNEIKEAKQKVTLEEEEKAYQRKLTE 755 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + FD ++++LA L E + Q +++ ++ E Q + ++ + + + Sbjct: 756 TSFDSEESYLACLWTEDKIEQTQKMIEDYEKQVSEQHLMIEKLVNEIKE----------T 805 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 +V ++ ++ + + + + E+ ++++ + + + ++ ++ ++ Sbjct: 806 DSVDIQILKDSRDEINAQKSVCERQKEEVNRRIRNNDQIYKDAKKQLEAKGEIQRKYLSI 865 Query: 881 GYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR------KAS 929 L+ K F ++ Q D ++ AN++L ++ +Y L R ++ Sbjct: 866 NELSKTANGELTGKVKIAFEQYVQAFYFDTVIEEANKRLRKMTFSQYTLHRADSVNLRSQ 925 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 LE+ V+D + R ++LSGGESF +LALAL LSD++ + +DS+F+DEGF Sbjct: 926 GGLEIFVLDHYTGKQ-RTVKSLSGGESFKAALALALGLSDVIQSYAGGIELDSMFIDEGF 984 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 G+LDSE+L+ A++ L +L + + +G+ISHV +KERI +I + K Y K Sbjct: 985 GSLDSESLEQAIETLISLTSGNRLVGIISHVTELKERIDKKILIHKTMEGSYIK 1038 >UniRef50_C8P3T8 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T8_ERYRH Length = 1021 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 217/1079 (20%), Positives = 399/1079 (36%), Gaps = 95/1079 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L ++ E +DFT+ GLF ITG TGAGKTTL DAI ALY Sbjct: 1 MKPILLSMRAFGPYFEETTVDFTQ---FHQGLFLITGDTGAGKTTLFDAISFALYDVASG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 +S + E ++ F + E YR R + G + + Sbjct: 58 SQRQPESLRSDFADASVETYVDLSFSHRNEIYRIVRKPRYERLKARGEGTTVQNATVQLY 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG+ L D +K + GLD +F + ++++QG+F LNA +R+++ L Sbjct: 118 LPDGQEL-DDIKTVNAKIIEIVGLDAQQFKQVVMIAQGEFLELLNASSNKRSDIFRTLFD 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTL--------------LTPEQVQSLTAS 224 T Y ++ + +++ + ELE + + V E L Sbjct: 177 TRFYLKLQDKLKQKNLELKRELEHTKQEVKSVLAGLPNLVESIEYTGFNLEEVYSDLKGK 236 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 QV+ D++ + Q+ Q+ + + + + + L++ E E+ LS Sbjct: 237 YQVMVDQQTAYLIEQKNLNQTRDVILESIKSWETYQQTLAHLKEKEREAEEL------LS 290 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + LR E L +R +E ++ + I + Sbjct: 291 QKEHYEKLRIKLETQTLIFNQLMPLRHGLEANKQKIFAIKHRYHDIHEKNKEVQKRFVDI 350 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 QQ T + Q + ++ Q E L+ ++ ++L L ++ Sbjct: 351 QQQYLTRNDRLKQLEQVKRQVEQYQKMLPQY----EILKSTKESYNAVIKRLGELH-LSE 405 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA-- 462 T ++ LR L + + Q+ +L + V + + Sbjct: 406 THIVKQLENQEELKNTLELLRDRSYELEKEKIVQEHQLETYLGQRELVLKRIESFDTKRE 465 Query: 463 -------LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 + + +++ ++ ++ E + L+ CP+CGS HP Sbjct: 466 LELLLENEQDAFKIAEKEYIEVNELLIQQELRYYKEQAGLLAQNLEDDSACPVCGSLDHP 525 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 +Q + ++ EV K E I ++ + Sbjct: 526 NPARLMNSVLTYDQ--IQEIKQEVFKKQEVQQNQAQTCHVINTKITSINEFIKE------ 577 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 A A LN L + D++ ++ + L L + Q + Q Sbjct: 578 ---DDENATRAELNEILIKIQDLKSLIELKRVEHETLNLKI------KTMREQQQNLEQL 628 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 ++ + + ++ L +A + +S L I+ L Sbjct: 629 KKNLVELKESLKQEHMRHAALKSEIKMIQSNLEFDN-------------------IESLL 669 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 +E L + +E LE ++ V + L +Q+ + +Q + Q QF Sbjct: 670 AKIEPLDHQIKEMEAKEQQNLELYQSVSTELEQLKTQESEIAKQLKTEEKEYQLKHQQFH 729 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 L D Q ++E TL + +N + + Q ++ + Q Q ++ P Sbjct: 730 D-LGDKYNLDIQEIEWESLNEMTLKNDALMLRNYDERIIQIRSEINQLKT---QREKKPP 785 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 LT +I+ + ++ +++ +T+ + L++ ++ TL +Q A M Sbjct: 786 HTLEYLTEEKHKIEGSIVSLNKTIQDASTNMTTLESILRRFDSIQKNSLTLERQGAIMD- 844 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA------ 928 N + K+ + Q D +V AN++ T + RY+L R+ Sbjct: 845 --GLSKTANGDLSGKQKIALEHYVQSAYFDYIVEEANKRFTPMTSNRYVLLRQEKAERLN 902 Query: 929 -SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 L+++V D + +R ++LSGGESF SL+LAL LSD+V S R+D+LF+DE Sbjct: 903 TKSGLDLDVYDQYTG-KIRSVKSLSGGESFKASLSLALGLSDVVQRFSGSVRVDALFIDE 961 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 GFGTLD +L A+ +L L + + +G+ISHV +K I QI + K K Sbjct: 962 GFGTLDEASLQQAMKSLTDLAGTAEYVGIISHVPELKTLIEQQIIISKTEKGSAIKTRV 1020 >UniRef50_B9J003 Exonuclease n=78 Tax=Bacillus RepID=B9J003_BACCQ Length = 1029 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 198/1069 (18%), Positives = 400/1069 (37%), Gaps = 82/1069 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + K + IDF + +FAI+G TGAGKTT+ DAIC LY E Sbjct: 1 MRPIQLIMTAFGPYKQKEVIDFD--DLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASG 58 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + D E+ F++KG+ Y + Q + + VEL Sbjct: 59 EERSDTSMLRSQFADDNVYTSVELTFQLKGKRYEIKRQLGH-KKQGNKTITGHAVELYEV 117 Query: 120 ADGKILAD----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 D + + V D + L GL +F++ ++L QG+F L ++ + + E+L Sbjct: 118 IDEEKIPAVDRFHVTDVNKKVEDLIGLSKHQFSQIVMLPQGEFRKLLTSETENKEEILRR 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG---------------VTLLTPEQVQS 220 + T+ Y + ++ ++ K + L++ Q + + L ++ + Sbjct: 178 IFKTDRYKLMRELLDQKRKQWKDVLQEKQKERELYFRNVFKLPIRDGSLLETLVEQEHVN 237 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 ++ L E +Q Q + T+Q + + +++ + + ++ + Sbjct: 238 THQVVEALEQETAAYKAEVEQLQVEQDVQTKQLKDAETRFHAAKSVNEKFIDLQQKNEKY 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 L + ++ + AE + L + Q EE Q +L I + Sbjct: 298 NTLQENRTVIEMKETSFKRAEQAKRLLPLEQWHEEAMQNEQKAESLLKQIIAKKENIMSN 357 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + Q+ + + + + L + Q L +AE ++ L Sbjct: 358 FELAQEKYEAVKN----IEPEREKAKKFVQRLEELQPIIASLAEKQLNLQNAEIQIGKLK 413 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT--Q 458 L ++ Q Q L Q V + + L ++ + + Q Q Sbjct: 414 EGMQNLDR-QLEEHTNQKQLMSGELQQLERALEQYVDKVEELTNMREDAKVLKQAYDVWQ 472 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + ++ K Q+ V E+ + L G+ CP+CGST+HP Sbjct: 473 EKQKFEQEKETAFTKMQEAVRVYENMERRWLSEQAGILALHLHDGESCPVCGSTNHPKKA 532 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 Q+ + L L ++ + + + + Q ++ E + + L Sbjct: 533 TEQSDAID--EKELNDLRDKKNIAEKLHVQVEEKWNFYHHQYEQVIEEVKKRGYQSEELA 590 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 + + A+ ++ ++ + + + +++ + ++ + + + + Q + Sbjct: 591 ETYSALVQKGKQLATEVNTLKASEETRKQIAVKIKSVEEKVD---ALQKQKRDVETEQHR 647 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 IE L T+ +P+ +Q Sbjct: 648 IEMDCMQLRTSYEHDKKNIPEN---------------------------LQTVQAWKVQF 680 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 + +L E V E ++ + + + ++Q+ Q A ++ +F L Sbjct: 681 DQAMHELKLMEDEWKKVQEAYQHWQNENIRIQAEQEGASNQFESAKSKKEETFTRFMKEL 740 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + S F DQ + A + + + L++ Q+ + L Q E + + D Sbjct: 741 EQSGFTDQITYKEAKLSDAEMDMLQKEIQSY---YSSLEVLAKQIEELQGELKDKEYMDI 797 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 AL ++ ++ L +K + + I + +Q + ++ E Sbjct: 798 TALGEHIKDLEINLDIIKEKRQRAQNAVTYISDLHENIRRIDEQIHEEEKAFQELVDLYE 857 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------SE 930 ++ F ++ L+ +V +AN++L +L G++ L+R Sbjct: 858 VMKG-----DNESRISFERYILIEYLEQIVQIANERLRKLSNGQFYLKRSERVEKRNRQS 912 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFG 987 L ++V D + RD +TLSGGE F SL LAL ++D++ I+++F+DEGFG Sbjct: 913 GLGLDVYDAYTG-QTRDVKTLSGGEKFNASLCLALGMADVIQAYEGGISIETMFIDEGFG 971 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 +LD E+L A+DAL L SG+ IGVISHV+ +K +P ++V K Sbjct: 972 SLDEESLTKAVDALIDLQKSGRFIGVISHVQELKNAMPAVLEVTKQKDG 1020 >UniRef50_A5EW11 Exonuclease SbcC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EW11_DICNV Length = 988 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 282/1036 (27%), Positives = 443/1036 (42%), Gaps = 62/1036 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I S+R NLN+LKG W+IDFT + +FAITG TGAGK+T+LDAICLALY +TPR Sbjct: 1 MRIESVRFHNLNALKGAWQIDFTAMA---DDIFAITGATGAGKSTILDAICLALYGQTPR 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ N +M R AEC AEV F + G+ YR FW QNRA + DG LQ P+ ++ Sbjct: 58 LGKITTKDNQIMNRSRAECGAEVVFFIAGKRYRVFWRQNRAYGRRDGKLQEPQHYISDAE 117 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G I+ +K+ A +T LD+ RFTR++LL+QGQFA FL AK +ERA +LE++TGTE Sbjct: 118 TGVIIEEKLSRTAAKVAEITHLDFARFTRTVLLAQGQFATFLQAKGEERAPILEQITGTE 177 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V ++ + L + S ++L++ E++ A Q L D A Sbjct: 178 IYSEISIAVQKRFAREHDDFSVLADKMSRISLVSAEEIARWQAEEQQLMDSICAQQKAAD 237 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++ + LQQEA Q L + + P+ A + Q W+ Sbjct: 238 DWRNAVHIHQQLHTLQQEAHATQTRLAEIDKKMNALLPEQARFAQYQKVSAGAALWDAFM 297 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A +Q + + + + A+ A Q QQ + RQ Sbjct: 298 RTQTRCAEQQQLVNNSAALAKKAAEQVKNAQIARAQAEAVWQNAQQKEEAAQPLLNEARQ 357 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + A R + + + E AL A + E + + Sbjct: 358 LQAQIAALRIYERDFP------KTLPEMVLRVEVAEAALNAALAQKSKQEYWSRQNCLLQ 411 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 ++ + Q + QI K ++ Q Q A L + +++ + D Sbjct: 412 RQHVLQDFQQKYQQITALNKTQQDVRQQWQETAQRLQAVQADLAQKTMHWQQNKARAEDK 471 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + I + +IK+L QR L+ G+PCPLCG+ HP + + E + Sbjct: 472 RQIYDLSLQIKSLNEQRQLLRTGEPCPLCGAREHPFAVSMP---------DMTTAEQLWR 522 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +E + + + +++ + QQ A+ L I + L Sbjct: 523 AAQQEAEAADEARQQLAQLALQLMERCAQIKEQSLIIEQQISALRQELVIFERDLSF--- 579 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + ++ ++ A + Q Q++ + A ++ Sbjct: 580 ----------------RAADIGREMEAVKTDLAQVVQRLTLIDEAEKNLAAARAQAFFEK 623 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 + + L Q + + + Sbjct: 624 KAKFAQLLGGQ---------------------TIEDYQAAQKRLLAECERGYQAAQQAEL 662 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 + LA + Q + A Q A+ +F L A+ F+ + AF A + Sbjct: 663 AQIKDELAQRAAYQRDAALLMQAQQEQTAAEQEFMQFLAANGFEHRAAFEALQAAARDFE 722 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 ++EQ L +++Q Q + ETL Q L L Sbjct: 723 RVEQQMAQLTEEKKQQQWQL----ETLCDRVNKAQQGLPDTMKDAAVCQTHLQTITSALA 778 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 + G +R + +Q + + + L ++ + V+ W L LIGS +G KFR FAQ Sbjct: 779 KAQEDLGAVRARRRQQENEQAENAALKERYQRQDAVVQRWQRLYDLIGSSDGKKFRNFAQ 838 Query: 901 GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 LT + ++ AN+ L ++ RY LQ + L + VVD WQ VR +R LSGGESF+VS Sbjct: 839 SLTFEAMLLEANKVLAKMSDRYQLQAEMEPPLSLVVVDLWQGGEVRSSRNLSGGESFIVS 898 Query: 961 LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 LALAL L+ L + R+DSLFLDEGF TLD++ LD ALD L ++ SGK IG+ISH+ + Sbjct: 899 LALALGLAALSGREARVDSLFLDEGFATLDAQALDVALDTLASIQMSGKMIGIISHLPLL 958 Query: 1021 KERIPVQIKVKKINGL 1036 KER+ I+V Sbjct: 959 KERVSTHIQVIAAGNG 974 >UniRef50_C7HSP3 Exonuclease SbcC n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP3_9FIRM Length = 1020 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 177/1085 (16%), Positives = 414/1085 (38%), Gaps = 116/1085 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + + K + IDFT+ + +F I+G TG+GKTT+ DAI AL+ E R Sbjct: 1 MKPVKLEMYGFMTYKNKTFIDFTKI--YDSKIFIISGDTGSGKTTIFDAISFALFGEIQR 58 Query: 61 LSNVSQSQNDLMTRDTAE-CLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA-- 117 S+ + FE+ G+ YR N+ + N+ V Sbjct: 59 EGFNSKDIRSDFLGSDDPITYVDFYFEIDGKNYRIKRIPNQKAKKTRVNVNVSHSVEFYK 118 Query: 118 -RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + +++D + + + GLDY + R M+L+QG+F+ FL + E+AELL ++ Sbjct: 119 IENKNEILISDGPQKTDKKIIEVIGLDYNQLNRVMILAQGEFSKFLKSNSDEKAELLSKI 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQAS------------------------GVTL 212 + +Y +I + E K+++ L+ + + Sbjct: 179 FSSYLYKEIEEKLKEASKNSKRNLDMISNSLENEIVKNELLGDKVDDELIKLKDFQKIID 238 Query: 213 LTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAE 272 + + + ++Q+ DE+ L + E LN+ +++E + + ++ L + Sbjct: 239 IIEDLLLESEKNIQIKNDEKLSLNKNLENENSKLNFYEKENEQIENYKNLFKEKEKLLED 298 Query: 273 EEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 E + L A+ + ++P++E + + + ++ +++ N + Sbjct: 299 ESFYKNLKKDLVYAEKSIAIKPYYESFLDLNKSQKDLKTKLDFENENSNFIEKELEENKT 358 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA 392 + + L+ + ++ + ++ N + + + E + +++ + + Sbjct: 359 YLGNKDELLKIIDKKKENIVKNLEILNKFEN-LQKIKDELDKNKKAFEDGKNYKKSIENN 417 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 ++ + +DE+ + + +I ++ I+N+ Sbjct: 418 LKEKEKINEKIRK-KSDELLDFSRNLEKITKKSHNAYQKVFEIQNFYEKAIINDEKIKNL 476 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 E+ Q + A + + + K+I + R L+ CP+CG Sbjct: 477 NDEKIQFDKANKAYEKAKILLDRAKENKKSI--------QINEFRKDLKEKGICPICGRI 528 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 +E ++ + ++K+ ++ L +++ ++ E + Sbjct: 529 YKGEIEFLESFDLD------------IEKIKKDYFDLELKINLSKDKISDLEKSIDFNME 576 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 + + + Q + + ++ + + L+ + + I Sbjct: 577 KAEDVEKNLQNYKNEHENLKKSYEKVRE---------EYEEEIKNKKALENEAFELEKII 627 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 + ++E L +E E+ +++E + + + Sbjct: 628 GDLENKLENL------------GNLNNIEELENKFKIKKEELDDFDE------------K 663 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 ++ + + E + E +++ ++ + +S+ ++L + + + KA+ Sbjct: 664 KVIENVNFDKKFVENEEGRIKKIDEKIKKLEKEKSSSNSKVESLSSYIKINQEKILKAEN 723 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 F+ ++ + F FL L + L ++ Q ++ + + + Sbjct: 724 IFENKIREN-FKCIDEFLKYLEKSKDLIDRKEEIQKYFENLNNISIRLSSLKDYANKEKF 782 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 ++I++++ L E + ++ + D+ + ++ + + Sbjct: 783 ET-----------DKIKEKIENLKNILEETNDAVFSLKLNETRLKDSENEIYSIEKNFNK 831 Query: 873 MTQQVEDWGYLNSLIGSK-------EGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL 924 + + L+ + E F F ++ LAN +L + G++ + Sbjct: 832 LKNEDGILYKLSKIADGSLSNVSGREKLNFETFVLSHYFRKILSLANIRLKEMTDGQFTM 891 Query: 925 QR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HK 974 R + + L++E++D +R +LSGGESF+ SLALAL LSD +S Sbjct: 892 IRKKQTNDKRKNYGLDIEILDANTG-KIRSEASLSGGESFIASLALALGLSDEISMENGG 950 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +ID+LF+DEGFGTL + L+ A+ ++ L+ K IG+ISHV+ +K+ I +I+V Sbjct: 951 IKIDTLFIDEGFGTLSDDYLEKAIRTIEKLSYDNKFIGLISHVKELKDAIDAKIEVSYSK 1010 Query: 1035 GLGYS 1039 G S Sbjct: 1011 TEGSS 1015 >UniRef50_A6CK38 Exonuclease, SbcC family protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CK38_9BACI Length = 1044 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 183/1081 (16%), Positives = 415/1081 (38%), Gaps = 83/1081 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ IDF +F I+G TGAGKTT+ D I A+Y + Sbjct: 1 MRPLKLTMQAFGPYPSAETIDFQ--LLGHRTMFVISGKTGAGKTTIFDGISFAIYGKASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL------QVPRV 114 D + F ++G+ Y S + + + G + Sbjct: 59 EDRHGNDLRSQFANDDDVTEVSLTFSLRGKIYLIIRSPQQEKKKARGEGFTTVNAKAELY 118 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + ++LA V+D E + LD +F + +++ QG+F L + K++ +L+ Sbjct: 119 AINENGEKQLLAANVRDVDEKIKEIIQLDANQFRQILMIPQGEFRKLLTSDSKDKEGILQ 178 Query: 175 ELTGTEIYGQISAMVFEQ----HKSARTELEKLQAQASGVTLLTPEQ------------- 217 L TE Y I + E+ + +E + G+ E+ Sbjct: 179 RLFHTEFYKIIQDKLKEESDLLKRDVEKAIEDRTRRLLGIHPEQNEELRELLLKEPLNDH 238 Query: 218 --VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 ++ L ++++ + QL +++ + + L Q Q+ + + + E+ Sbjct: 239 MILEKLQLHIEMMEENLSQLNHTYEEKHKERDQLQAQLVQAQKLVEQFEKRRALREEKRS 298 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 + + + + +++ + + ++++ V L+ +A + A Sbjct: 299 LEKRQEEIDKLKIQIKKAYQADKLVQQDEYCRRLSRELKTVERELEKLLAE----QQELA 354 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 + ++ ++ + + + + N G + + ++ + + + Sbjct: 355 DKMSKARKNWEEEQQKEEARNEAAKKVNTLEGLKEDVYSLGQLEDEVKDLDIKRNQLKNE 414 Query: 396 LNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 ++ ++ L + + LR L ++ Q +L +Q + +E Sbjct: 415 ISR-KSVELNSKKVLLNEQERKKVNLEELRLKSFELEKEVTQLQSE-EKLFTQLQKLQKE 472 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTIC---EQEARIKTLEAQRAQLQAGQPCPLCGST 512 + L +++Y +Q++ D ++ E ++L PCP+CGS Sbjct: 473 TVEVERILANRKEQYHSASQEVEDARSTLIWLEDRWNKAQAGILASKLVDKDPCPVCGSE 532 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP + Q P E ++K E +A ++ E + ++ Sbjct: 533 HHPNLAHLQDDLPD---------EKDIKAAKEMVMVKEKHENATSRAFYEIEAKYNAVHT 583 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 +Q ++ V L+ + ++++ + Q EL + Sbjct: 584 QKQEALEEIIQVREVFKEEEVDLELTSIRNNLENKNIQLKGFSLQLKELNSIVERIEAAK 643 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 +Q E+ ++L + +E + + R+ + + Sbjct: 644 TGITEQEERLEKL--------------KGDELGVSEAFHAKKGALDSRRTAIPLEIRTRE 689 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 + L+T E + ++ ++ Q + QQ +++ + Sbjct: 690 KFNAALKTAQDKLNTLKASYEKAQELYNRLLKEVSVNEVQVKDKQQSASRLQAEMEEERN 749 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 +F L+ F++ +AF A E ++ +E+ + + R + + + L Sbjct: 750 KFLQILEEQGFENYKAFQEARRAESEISLMEKKVTSYGEEVRSVHDRLEELEKALQ---- 805 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 +E++Q + +++L++ ++ ++ ++ + L +Q+ Sbjct: 806 ------DTEEPQLEKLQLIFTEINEELKKLNEEYNSLKMKISENQSIHEYVCNLNKQMKD 859 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS 929 + ++ G+L+ + + + F ++ L++++ +AN +L ++ GRY L RK Sbjct: 860 LEERYSIAGHLSEMARGQNAHRLTFERYVLASFLEDILLVANDRLMKMTSGRYRLIRKRD 919 Query: 930 -------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDS 979 LE+ V D + R +TLSGGESF +L+LAL L+D+V + + + Sbjct: 920 RSKGNVQSGLELLVFDQYTGQE-RHVKTLSGGESFKAALSLALGLADVVQQYAGGVSLAT 978 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 +F+DEGFGTLD E+LD A++AL + +SG+ +G+ISHV +KERI +++V + Sbjct: 979 MFIDEGFGTLDPESLDHAIEALMDIQSSGRLVGLISHVPELKERIDARLEVIASQHGSTT 1038 Query: 1040 K 1040 + Sbjct: 1039 E 1039 >UniRef50_B0NJH6 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJH6_EUBSP Length = 1059 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 206/1094 (18%), Positives = 397/1094 (36%), Gaps = 96/1094 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + S IDF GLF ITG TG+GKTT+ DAI ALY +T Sbjct: 1 MKPIRLVMSAFGSYAEVTTIDFQG---VQQGLFLITGDTGSGKTTIFDAITYALYDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 + + E F +G+ Y + R + Sbjct: 58 GARDGNMMRSQYASEDMGTYVEYTFSYQGKEYTIRRNPEYIRLGKRRYADGSPRYVKEPS 117 Query: 119 -----CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DG + K ++ + + GLD +FT+ +++QG F L+A+ KER ++ Sbjct: 118 KVELILPDGSVFQGKKRETDQKIEEIIGLDSVQFTQIAMIAQGDFLKLLHAESKERKKIF 177 Query: 174 EELTGTEIYGQISAMVFEQHK----SARTELEKLQAQASGVTLL---------------- 213 ++ T +Y ++ + + L +++ + V + Sbjct: 178 TKIFQTRLYYRVQEELKKNAGRLYYQLEDNLREIRQEIERVEVEKALPSKERWEEIKSLA 237 Query: 214 ----------TPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 E +Q A + +L Q + ++EL Q + Sbjct: 238 VLPYEEVKATLEEILQEGRALEKEKQKISDRLAKRLDQLKSKKLEAEARNELFQTYENMK 297 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 ++ Q+ E+E+ Q L+ A+ A E +A+ L R+ + +L+ Sbjct: 298 ESWQELGKEKERYQESERRLAQARRAEKASSAEEALAQARMNLDRGRKTLRITEEKLEEA 357 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 L +++ +K+ E + + + + Q E + Sbjct: 358 QILAEALKAVKSKKEQEFLDWKAECEAGIIRIQDALPRYEQIEALKEQQEALGKALEKKQ 417 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q+ E L + + A Q L K L Sbjct: 418 GVLQEAETKEDGLKHSREEARRAQELYEVSKMNVEALGMKKEQCSHRLLQ-----LKELK 472 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 + ++ +E ++ E R+ Y A + Q + L+AG Sbjct: 473 GSFDTLLSLEEECRRKRCRSEEDRKSYLSA----AALYEAKYQAFLDEQAGILAQGLEAG 528 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 PCP+CG+TSHPA++ + P + + + + + Q ++ Sbjct: 529 DPCPVCGATSHPALQPLKEGAPAQQEVEEARESRNLAERRRDASAAAFQ----EAAIRYG 584 Query: 564 ENEAQSLRQDEQALTQQWQA-VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ 622 + LR + + + S I + L+ + +A + + +L Sbjct: 585 SGKNAFLRGYRELTEDEPDEGMLPSEAICHRILEAERQCQEAYHKVSWAYEKADKEAKLH 644 Query: 623 GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN 682 + +QI ++++ L Q + ++ LA + Q Q Q Sbjct: 645 EEAKTLERQIEDQLAVLKEQHSKLE---AEQGELKKQYQQIQADLAAKCQGLPFLSQEQA 701 Query: 683 ELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVL 742 + R+ +L L+ L Q+ E EE + R++ Q + + L ++ + Sbjct: 702 -----KERLTELEDELQLLKQAYERAKAEEKESMVTVRRLEGQKKSSQEAVEELDREAGI 756 Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 ++ ++ AL+ F D+ A+ AA M E+ LEQ Q + + ++ Sbjct: 757 RSE-------AWNQALKVQGFADEAAYQAARMPEEETALLEQKIQEYRVKVNETAGMIKT 809 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 L + ++I +E+ + + + +++ ++ Sbjct: 810 IEAQLEGME----------PADTDKILEEIQKAETDAQAVQNESMRLYSMNRKNQGVKEH 859 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSK----EGDKFRKFAQGLTLDNLVHLANQQLTRL 918 + + + + Q E L+ F + Q ++H ANQ+L R+ Sbjct: 860 LKQYLDKKGILRSQYEMLENLSRTANGSLSGTVKMDFETYVQRQYFRQIIHAANQRLVRM 919 Query: 919 -HGRYLLQRKA--------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 ++LQ + L+++V + +VRD +TLSGGESF+ SLA+AL L+D Sbjct: 920 TSNEFILQCREVGNLSSQGQAGLDLDVY-HMASASVRDVKTLSGGESFMASLAMALGLAD 978 Query: 970 LV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 +V + R+D++F+DEGFG+LD + A+ L L + +G+ISHV +KE+I Sbjct: 979 IVQNTAGAIRLDTMFVDEGFGSLDDTAREQAIRVLHDLAGDKRLVGIISHVNELKEQIDC 1038 Query: 1027 QIKVKKINGLGYSK 1040 +++V K +K Sbjct: 1039 KLQVTKTEKGSQAK 1052 >UniRef50_B5CXJ7 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXJ7_9BACE Length = 1144 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 267/1137 (23%), Positives = 488/1137 (42%), Gaps = 107/1137 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L ++N+ S + IDF P + +F I GPTGAGK+TLLDA+CLALY+ TPR Sbjct: 1 MKLQKLIIENIAS-IEKACIDFEHGPLGEDSIFLICGPTGAGKSTLLDAVCLALYNTTPR 59 Query: 61 LSNVSQ-------------------SQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNR 100 L + LM RD+ E+ F + G+A RA WS R Sbjct: 60 LKQAANERYLDENDSFSGTGEVSIDDSRMLMRRDSVSAQVELWFTDAAGDALRAVWSVAR 119 Query: 101 ARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 ARN+ G +Q L+ DG L +K + GL + +F R+ LL+QG+F Sbjct: 120 ARNKAGGKIQKVVWTLS-LQDGTPLTNKSTETRTEIERRIGLTFEQFCRTTLLAQGEFTK 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL +K +E++ +LE+LTGTEIY +IS ++ EL++L+AQ G+ LLT E++ + Sbjct: 179 FLKSKEEEKSNILEKLTGTEIYSRISREIYVMKTEKEAELQELKAQTGGIVLLTDEELAA 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 L + +T+E L T +QEQ W+T + +L + +ALQ E + Sbjct: 239 LQTEQRQVTEETATLRTQLKQEQDLRKWMTDEQKLAHDLEETGKALQSLTERVESEDYKR 298 Query: 281 AA--LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH---HAA 335 L ++R W A + +++E++ + S + Sbjct: 299 NKSLLDDWDRTADVRFQWTEQAALQQRIRTSEKELEQLKEKYCSLSTGLGQLERMQVQCR 358 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREH-------------- 381 +Q A + + + ++ + + + Q R+ Sbjct: 359 EQWAACETYLTGVQEKVPVYESLQSLSALSDQIQRALQQSEDYRKEKAHKGAIHQKTLEV 418 Query: 382 -------LRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQ 434 Q ++ +Q++ A L +E+ + + + L Sbjct: 419 RQGATTSYEQARKVAEEKQQEVAACRTQLEELQVEELRQKKQEADARLDGWKKLREALSV 478 Query: 435 IVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEAR--IKT 492 +++ +Q + + + Q+ + +++ + + ++ +V+ + +++ Sbjct: 479 RAEKEQAWLDVQKNRKTLQDDCRQQQQTVAQLKAQAEVCRKEKEEVQQVYDKQRMSCEDW 538 Query: 493 LEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQ 552 RA+L G CP+CG +++ +A + + LE + +++ E L Sbjct: 539 AREARARLSKGDVCPVCGKEVGDDLKS-EAHFVSLLEPVRALLEEKARRVEEVLTALARA 597 Query: 553 LDAITKQLQRDENEAQS-----------------------LRQDEQALTQQWQAVTASLN 589 + ++ +E EA+ +++ ++ ++Q QA+TA L Sbjct: 598 EAEVRSLMRLEEMEAKKETAAKEAYFLAEKAVADMPLYATVKEADEVVSQVEQALTAQLE 657 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 + + + + Q R + + Q ++ + ++E ++L Sbjct: 658 VCDRLEAQWKQAEEGQQRLNRLTKEREELTTASEQWHRKVEEADKAVSRLETELRMLEEA 717 Query: 650 LTGYALTLPQEDEE-----------ESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 L+ ALT+ Q E+ E+W R+ + ++ N Q R +QL+ + Sbjct: 718 LSREALTVSQCVEKGEILIVFTPWQEAWKTDRENFITALKKETNRYVEQQTRREQLSHKV 777 Query: 699 ETLPQSDELPHCEETVVLENW-----------------RQVHEQCLALHSQQQTLQQQDV 741 E+L E +L + Q AL++ ++ Sbjct: 778 ESLASQVEQVQSVRQSILSELPAWGQATAETIPDGPCPEGLPGQWNALNTSVLSVCHAIK 837 Query: 742 LAAQSLQKAQAQFDTALQASVFDD-QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV 800 + + ++ A + L + A ++ + + + Q L+N + + Sbjct: 838 TSQKLREEKSAGVEAFLVGHPEISREYLEKLAGLEVEKVNMARRTLQKLDNDLTSRRAEM 897 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 + LAQH+ RP + +T + +++ +++ ++ G I Q L + Sbjct: 898 ERVGRELAQHRAQRPSETEGMT--LATVEETISRLEEQQTGKLARLGAIAQMLAHHEECL 955 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG 920 Q+ + + +QI ++V++W + +L GS +G KFR AQ L L+ AN L+RL Sbjct: 956 QRIRKVKEQIEVKQKEVDNWAGVAALFGSADGKKFRNIAQSYVLRQLLAGANHYLSRLTD 1015 Query: 921 RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSL 980 RY ++ L + + D +Q R T T+SGGESFLVSLALAL LS L +D L Sbjct: 1016 RYRMEC-PPGGLTILLRDEYQGGVKRPTSTISGGESFLVSLALALGLSSLNRKSLSVDVL 1074 Query: 981 FLDEGFGTLDSETLDTALDALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 F+DEGFGTLDS+ L+T ++AL+ L+ GK +G+ISHVEA++ERI QI V+++N Sbjct: 1075 FIDEGFGTLDSDYLNTVMEALEKLHQIGGKKVGIISHVEALRERIATQIHVERVNHT 1131 >UniRef50_B8HAV6 SMC domain protein n=2 Tax=Micrococcaceae RepID=B8HAV6_ARTCA Length = 1025 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 225/1090 (20%), Positives = 388/1090 (35%), Gaps = 119/1090 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I LR+ G +DF R + +GLF + GPTGAGKT++LDAIC ALY P Sbjct: 1 MRIHHLRISGFGPFAGTEDVDFDR--LSGHGLFLLNGPTGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG----NLQVPRVEL 116 + + E +EF +G + S + G Q + L Sbjct: 59 ARQDGKRLRSDHAEPSQEPAVNLEFSAQGRRFEVTRSPAWDKPSARGRNGFTTQQAKTLL 118 Query: 117 ARCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 DG + + + L G+D +FTR ++L QG FAAFL +K +R ELL+ Sbjct: 119 RERVDGTWVEKSARNDEAGAEITALLGMDRDQFTRVVMLPQGDFAAFLRSKAADRLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 +L GT+ + + + + +AR + L Q +T + SL + +K Sbjct: 179 KLFGTQRFEALEQELSREALAARESVAALSGQLELLTARAESEAASLELAEDSAPAADKA 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + + L ++A A+ EE + + L A+ RN Sbjct: 239 AERLEWLQHAVAQRLEALRGFAEDAETAAAERTLAVDEESGRRERRQRLEAAEARRNAVS 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 A ++ E + +L++ A + + + L + + + + Sbjct: 299 DAAPRLRELEARLARHRKAEVLVGQLKNVDGAAAKVASASRAAESALTFLRLAADEDPEL 358 Query: 355 H----------------------DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA 392 A + D + L+ +++ T Sbjct: 359 APFELVDAAGTGSSAASLPESVMASAADELGRLRSLLAVVEARLPDEDRLQALRKRHTDL 418 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQR-----PLRQHLVALHGQIVPQQKRLAQLQV 447 +K L A L A + + L AL + + L + Sbjct: 419 GRKQAELEAAEAKLGIRSAALLEEREGLEAGLAPLELLAGTAALRSKEAASAEELLDVVR 478 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 + + + R+R QQ D++ E AQLQAG PCP Sbjct: 479 RHASAVAARNAVKLRCDAARERQLAAKQQWLDLRE----ERLTHAAAELAAQLQAGDPCP 534 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 +CGS HPA G +G L DA + + Sbjct: 535 VCGSAEHPAP----------------------TAGGNQGPGLAQAEDAAHGAYEAADAAL 572 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 + + Q + T + E L + Sbjct: 573 ARVGAELANAEQSVAVLAGQGGDTPE---------------EEALAAAGMARTAAAEAER 617 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 + + + ++E + A + +S LA ++A + + L+ L Sbjct: 618 AVAGLSEVRGKLEALDVGIAEAAAAKAEIDAGLAQAKSSLAEVSEQATALDEA---LSGL 674 Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 + L L +L + + Q +A Sbjct: 675 RAGRPSLARRLRSLEGAVAVLDKAVA----------------------AQAALTVAQSQA 712 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 A+ Q + AL A+ F + L+D L+ + +++ + + L T AE L Sbjct: 713 DDAREQLELALPAAGFATADEARSQLLDSAEADGLQAEVRAGQDEAARVRELFT--AEDL 770 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 + + + + ++ E A+ ++ R+ + G + L A + L Sbjct: 771 VRAAEEKAGGFDPSGERLAGLESEAAEARERARQADLAAGMAARCLASLAAISRDYAALA 830 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRY 922 ++ L + + +R + L+ + A+++L + GRY Sbjct: 831 GSALGPAERARMLAGLADAAAGRGDNTYRMSLNSYVLAARLEQVAIAASERLVAMSDGRY 890 Query: 923 LLQ-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---S 972 LLQ R A L +EVVD W RDT TLSGGESF+ SL+LAL L+D+V S Sbjct: 891 LLQHTDAKAARGAKSGLGLEVVDQWTG-HRRDTSTLSGGESFMASLSLALGLADVVQQES 949 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 I++LF+DEGFG+LD ++L+ +DAL+ L G+ +G++SHV MK+RI Q++V K Sbjct: 950 GGVEIETLFVDEGFGSLDEQSLEQVMDALEGLRDGGRVVGLVSHVGEMKQRIGTQLQVLK 1009 Query: 1033 INGLGYSKLE 1042 ++ Sbjct: 1010 GRTGSTLRIS 1019 >UniRef50_C5EJR5 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJR5_9FIRM Length = 1007 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 194/1055 (18%), Positives = 379/1055 (35%), Gaps = 85/1055 (8%) Query: 23 TREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAE 82 + GL+ ITG TGAGKTT+ DAI ALY + + A E Sbjct: 4 DMDALGDRGLYLITGDTGAGKTTIFDAITFALYGNASGEARRPKMLRSKYAPMDARTFVE 63 Query: 83 VEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV--ELARCADGKILADKVKDKLELTATLT 140 + F Y + R + G + R DG+++ K + TL Sbjct: 64 MSFVYNEAGYCVRRNPEYMRAKQRGEGETKEKPDAELRMPDGRVI-TGDKAVTQEIETLL 122 Query: 141 GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTEL 200 GL +F++ +L+QG F+ L+ K ++R + E+ GT Y Q + +Q K+ + Sbjct: 123 GLSREQFSQIAMLAQGSFSRLLSGKTEDRGTIFREIFGTRPYQQFQEKLKDQAKALYGQY 182 Query: 201 EKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEAS 260 + T + +++ ++ L + +Q + Sbjct: 183 ADTRKSIGQYTDGVIPGEERADLAIRWKEAQKGSLEVMLELLEQMIT------------- 229 Query: 261 RRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL 320 EE+ ++ + L + S AL + ++ Sbjct: 230 ---------ADMEEEHAADGRMKAIREEMSALGLKLGKAQSASKALKDMEAARLVLDREA 280 Query: 321 QSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE 380 A + + Q+ ++ + + Q++ AG + + Sbjct: 281 PRLAAAQCNYNKEKEGQAER-DILMVTITKMEEAMKSYVQYDGLTAGREECLKRIAGLKA 339 Query: 381 HLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQK 440 + Q++ ++L L TA + R + L ++ + Sbjct: 340 VALRTQEEEARWREQLLKDDNELADL-----KTAGEDYQASRLAIEKLAEYRIRVDSLVR 394 Query: 441 RLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL 500 L++ +N+ Q E+ + K ++ V Q +L Sbjct: 395 ELSEYHRERKNLEQA--------QELYREADGKRRRADQVYRSLYQRFLDNQAGILAREL 446 Query: 501 QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 G+PCP+CGST HPA R + + + GE A + + Sbjct: 447 AEGEPCPVCGSTVHPAPAGT---------GRADEIRADAGQAGEIRADAGRADEIRADAV 497 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI--QPWLDAQDEHERQLRLLSQR 618 E +A + R D + + + ++ Q D++ L + Sbjct: 498 WAGEVQADTGRADTVPGGMKPETIFQGPYSDSDVTKELVDQAAKDSEARTREASELSLKA 557 Query: 619 HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ 678 L G + + + +QQI+ + L + +E +++ A S Sbjct: 558 GRLAGGLET---RYTRMRQQIDAEVGSWKESWRE-RLNQAECRADEGAVSSPSGNAASPG 613 Query: 679 QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQV-------HEQCLALHS 731 RQ+ L ++ + +L L + + + L++ ++ + Sbjct: 614 GRQHFLKVWEDMLGELKDQLARQETAAKKRSADCRARLKHKEELEKGRVGHQKSLEEAGE 673 Query: 732 QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD--------EQTLTQLE 783 ++Q + + A + + + Q F+D++ L E+ + E Sbjct: 674 RKQEALKLLIEAEEREKGLEHQIKELAGKLPFEDRKQAQEELAGKRAAFEAGEKAYREAE 733 Query: 784 QLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENT 843 ++ + + A++ + L + R L L +E++ + +L Sbjct: 734 KVYHEVNQKVADARSRMEALRAQLEDARIDREVTALGLGRQMEELSAAQGRVRAELESQE 793 Query: 844 TSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI----GSKEGDKFRKFA 899 ++ I +L+ + + + ++ QQ L+ G KE F + Sbjct: 794 QTKSRIHHRLETNRTAYGRILKQKDAMEEIQQQWTWVKSLSDTASGEVGGKEKITFETYV 853 Query: 900 QGLTLDNLVHLANQQLTRLHG-RYLLQR------KASEALEVEVVDTWQADAVRDTRTLS 952 Q + ++ AN + + G +Y L+R + L + V+D + R +TLS Sbjct: 854 QMAYFERIIARANTRFMVMSGGQYELKRCTEEDNRGKSGLGLNVIDHYNG-TQRSVKTLS 912 Query: 953 GGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 GGESF SL+LAL LSD + + R+D++F+DEGFG+LD +TL+ A+ AL L + Sbjct: 913 GGESFQASLSLALGLSDEIQSAAGGIRLDTMFVDEGFGSLDEDTLNLAMKALGDLAEGRR 972 Query: 1010 TIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLES 1043 +G+ISHV +KERI QI V K +G ++++ Sbjct: 973 LVGIISHVTELKERIERQIVVVKEKSGGSRARIQV 1007 >UniRef50_C7XXV7 Exonuclease SbcC n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXV7_9LACO Length = 1040 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 217/1079 (20%), Positives = 413/1079 (38%), Gaps = 76/1079 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ K E IDF + +F ++G TG+GKTT+ DA+C AL+ +T Sbjct: 1 MQPLKLHLQYFGPYKDE-VIDFQK--LTGTAVFLVSGNTGSGKTTIFDAMCYALFGQTTN 57 Query: 61 L-SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR---ARNQPDGNLQVPRVEL 116 + + E F KG+ Y+ + R + Sbjct: 58 DQDRDATALRSDFAPKNQETCVTFTFSHKGQTYQITRQPKQTIMGRGNKLVEHGTKVSLI 117 Query: 117 ARCADGKI-LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + K+ + L L +F + +LL QG+F FL + ++ LL + Sbjct: 118 YPLENSEPNEISKIGPANQFIEQLLNLTRDQFKQIVLLPQGKFRQFLESSSSDKETLLRD 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------TLLTPEQVQSLTASLQ 226 L T Y Q +A + Q + ++ + S T E + + ++ Sbjct: 178 LFNTHFYEQWAATLKSQLTEQQQAYKQTLDKLSVTKANLADVNGDQSTAEWLSQVEQKIK 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 + + + ++Q N L +Q Q + ++A A+ Q Q ++ Sbjct: 238 DRQSDIENISQEITRQQLVTNQLNQQLTNQHALVQAMGEKKKAAADLLDLQEQAPQINHW 297 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + ++ + ++ E + A +R + +Q +Q Sbjct: 298 RQIIERLTWYQEHQADYLNYQSLHTKLAENQRLIADKQAEVRKLRIEQKEVDTVAEQLKQ 357 Query: 347 SLNTWLQEHDRFRQWNNEPAGW--RAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + +R N+ + R Q Q E QQQL ++++ L L Sbjct: 358 QNERIRKLQERKNVLENQLPQYTRRDQLKQAVQTGEKQFNGQQQLVTSQKEKLELTQQRL 417 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 DE+ H + L + L + Q ++++Q L+ Sbjct: 418 QRVTDELDQLGEVHDHELKFENQRHQLQK-LQEIVADLQKHQRKSNELSKQQRTLQKWLD 476 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + +Q + D+K + + QL+ G PCP+CG+T HP + Sbjct: 477 QQQQLITQSQTTYDDLKDAYLR----GEIARLVHQLKPGSPCPVCGATDHPHPAPLPKDD 532 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 V + A + +L E A + Q D Q+ + L L A Sbjct: 533 RVVLNDEVEAANQRLSQLQREQAAKKSQFDDQKHQVNEEMATINELLVQLSQLMNDDFAT 592 Query: 585 TASLNITLQPLDDI--QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 ++ + + + +E + +LL+++ +L + QQ + QQ++++ Sbjct: 593 IDEAKEKVRSFSETVNKLRQNLLNEKRQTQKLLTEQSDLNQRQTEEQQQFTEAQQELDKL 652 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 Q L T Y + Q + + ++ + + Sbjct: 653 QMQLTTDRATYQAVVN-----------------DLQTEYEDAQSATAQVGEWQDEINHFQ 695 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 Q + ++ ++ E ++ L+ QTLQ+Q + + Q LQ+ A + L S Sbjct: 696 QHQQNTQRKQVMLAERVTNNQQELTGLNQLVQTLQKQIMESHQKLQQQLADYSPELDDSF 755 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + + LT L+ Q+ ++ + Q L+ + + + G Sbjct: 756 WTWAGGHIN------ELTTLQSRVQDFHTKQTRLQALIQRLEKQI----------GTQSM 799 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 VEQ QELA+ ++L E G++ +L+ Q + +Q ++V+D Sbjct: 800 PNVEQTSQELAEEQRRLAELQRQSGQLSNELQNILKTHDQVAKINRQQNSELKRVQDLQT 859 Query: 883 LNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS---------E 930 ++ ++ +K ++ L ++ +AN +L +L GRY + Sbjct: 860 VSDVMNGNTDNKLSLERYVLQSYLTEVLQVANGRLAKLTNGRYAFKLSDEAARGNGTKWS 919 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFG 987 LE+ V D A R RTLSGGESF+ SLALAL L +++ S ++++LF+DEGFG Sbjct: 920 GLEINVYD-DNAGQERSVRTLSGGESFIASLALALGLGEVIQERSGGIKVETLFIDEGFG 978 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 +LD E L+ A++AL ++ + IG+ISHV ++ +IP Q++V NG+ + + + Sbjct: 979 SLDQEALEQAMNALQSIK-GYQMIGIISHVTELENQIPNQLRVISRNGVSHVEYRQEIS 1036 >UniRef50_A8U5M1 Exonuclease sbcC n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5M1_9LACT Length = 1019 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 191/1060 (18%), Positives = 407/1060 (38%), Gaps = 60/1060 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + K + IDFT+ F LF ++GPTGAGKTT+ DAI ALY + Sbjct: 1 MRPLKLVMNAFGPYKEKVVIDFTQ--FQQQTLFLVSGPTGAGKTTIFDAIAYALYDDASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S S D C E+EFE+ G Y S + +G L+ E+ Sbjct: 59 TSRGKDSFKSQFASDEVLCFVELEFEIAGRNYFIKRSPVQIGPGKNGKLKKWSSEVEFHH 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G + K+ + + L L Y +F + ++L QG+F L + ++ ++ + T+ Sbjct: 119 NGTV-TTKISEANKEIQELLSLSYEQFKQIVMLPQGEFKKMLESNSADKEKIFRNIFQTD 177 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS---LQVLTDEEKQLIT 237 + +++ ++ + + +++ ++ + PE + L + ++L Sbjct: 178 TIKDLQSLLKDKASNLKQGMDQSESTLQQFVGMIPENSNEILREAILLYDIPTIMEELTR 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + + + L ++ S Q L E + + L + Sbjct: 238 LVESYKAKIQLLEKELATLDTLSHNNQRKIDLLVALEILEEEKEILGSNAELIEAKRLGL 297 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 +A+ + +QQ+E + Q+ + + + L + ++ ++ + Sbjct: 298 SLAKQAEECFETKQQVERIANEKQAIELELTKEQKQLTETAECLLETEKMYHSLQVAYKE 357 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 + Q Q + + + + K A+ + + + + Sbjct: 358 LPNKREALISLKEQEKQLSEKTTKEKAIGELEQENDAKQQAIKQLENQVFIGKEQLEKQE 417 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE----QTQRNAALNEMRQRYKEK 473 Q + + Q + + Q + Q + AA + + K Sbjct: 418 RTLQEIQQAKTSIMEKQRETSKLQQDQHETKRQQEVLLVFSGYLTKRAAKQKEFHEIESK 477 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 +Q+ ++L+ Q C +CGS HP+ + + V++ L Sbjct: 478 FKQVESHYQEQRLIYNRNIAGILASELKKEQACSVCGSLHHPSPA--KLGQDTVSKEILE 535 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 LE ++G++ + +L +++ +Q +E + Q + + + + + Sbjct: 536 ELEANKNEIGKQFDRISIELQGLSEAIQSNEKQLGIQSTALQDEQSKIEQRISEETMKQE 595 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 L E + + +++ + + + +Q+ + + +++Q + Sbjct: 596 KLT---------GELKALQKNIAKEEQAEKEKRDTARQVSENEAKMQQLASAVQYNTKRI 646 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + D ++ L Q E++ N I ++ + +T Sbjct: 647 IELKIEIDTLQTKLT-----LTDLSAIQIEISEKINEITRIEEEYSEAQEKKVRLEKAQT 701 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 + + +Q L ++ +++ + S ++F L Sbjct: 702 QYQTSTKAYEKQLSTLMERETDVKEVFAQ----------------KLSESQLDESFEKYL 745 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + ++ QL + + QT + + LA+ + + I+ E Sbjct: 746 VGKEAKLQLIDEIAAFDKKMWTNQTSMLEKKGNLAKEGAEQ--SIETYQTKNQAIELEST 803 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 ++LRE ++ ++ L Q N ++ ++ ++ + + + Sbjct: 804 AFKEQLRELIGTEKTVQSILSQIQFNYHAKKGQQEEYL----MYKELSEMANGSKETDYI 859 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQADAV 945 F ++ G+ + ++ AN + T++ RY+L R + L+++V D + Sbjct: 860 SFERYVLGIYFEEIIEAANTRFTQMTIDRYVLIRNKEKTKGAGPKGLDLDVFDNYTG-MK 918 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R +TLSGGESF SLALAL LSD++ S +D+LF+DEGFGTLD+E+LD+A++ L Sbjct: 919 RSVKTLSGGESFKASLALALGLSDVIQNHSGGVSVDTLFIDEGFGTLDAESLDSAIETLF 978 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 LN G+ +G+ISHVE +K RIPV I+V K + + ++ Sbjct: 979 ELNQRGRLVGIISHVEELKTRIPVHIEVTKSSEGSQAAIK 1018 >UniRef50_A7BEB9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEB9_9ACTO Length = 1024 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 218/1095 (19%), Positives = 379/1095 (34%), Gaps = 134/1095 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LR+ + G+ +DF+ F +GLF + GPTGAGK+TL+DAI ALY + R Sbjct: 1 MKIRWLRIVGIGPFAGKHTVDFS--AFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVAR 58 Query: 61 LSNVSQ-SQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRVELA 117 + S+ D+ A++ FEV YR + A + N + + + Sbjct: 59 TKDASKDRLRSNHISDSDPSEADLVFEVGTGIYRVTRTPAYTPAGKKSQRNSKSTLMRVV 118 Query: 118 RCADG-------KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 D + +A +D + GLD +F ++++L QG+F+ FLNA R Sbjct: 119 EDPDAPDGWRTVEPIASGPRDVGSEIPAIVGLDKDQFLQTIVLPQGKFSQFLNATSDARE 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 ++L ++ T+IY + + + S++ +E+ + A G + + Sbjct: 179 QILRDIFDTQIYVDFTKALVDAAASSKRGIEERRVAAIGAFERVRSLDAAFAENGTEDGS 238 Query: 231 EEKQLITAQQQEQQSLNWLT--------RQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 ++ Q +D ++ Q L A A+ A Sbjct: 239 AADGRAADAKEADQLDAGAEDSSAVTRWAEDACERAREAHAQTLHLAEVATATAREASRA 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRA-----SIRHHAAKQ 337 LS + + R++ A L I R A + A + Sbjct: 299 LSEGRALAEAQAEHARLSATLAELTSSEGAIASDRERAGQARRALAVAPLDAAEASARAR 358 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 Q +L+ L + D + P + R+ + + L A Sbjct: 359 LEAAGDQVAALSPALGDEDSIDSTSLTPEAVATLGKRAQDLRDEATRTRGSLEEALAVEG 418 Query: 398 ALAAITLTL--TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 +L + + + ALA+ A R+ L Q + + + Sbjct: 419 SLPEVRTHIDSLRSQHEQALARIASIEAERETLPLRIEQASEALRLMRADADTLPEAASA 478 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTICE----------------QEARIKTLEAQRAQ 499 N L+ Q ++ L + E ++ A + Sbjct: 479 LRALNERLDASMQADLLRSALLGASDELREATVAAKLANAAAADGHDLWIAQSASALALE 538 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L+ PCP+CGST+HP E E+ A L D Sbjct: 539 LEEDIPCPVCGSTAHPNPAPAADGEIT----------------REQVAELDQARDRAEAA 582 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 L+ + Q L + L + A T +L Sbjct: 583 LRDAQAGHQDLVRRIAQLNEVAGAPTPTLETE-----------------------RDGAA 619 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 EL ++ A + QI + + + Q + L A T A + Q+ Sbjct: 620 ELVAKLEALSPQITEIEAALAQERARLDGLTDSLASAR----------ETAASLASTLQE 669 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 R++ L A + R++ +L ++ + Sbjct: 670 RKSALAAAEARVETERADYTSLDARATAL---------------DERARRAAALAGACAD 714 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A +L +AQ AL+ + ++ L+ + LE E A Sbjct: 715 WDNARAALAQAQRSLADALEEQGLE-ADSWRTLLLPLPQVEALEARVAAHEKALFAAHEA 773 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + + A +E + + + + + G + Q Q Sbjct: 774 LAS---------ERLTRAASAPAPDLEALTETARKAEEDAAMAARASGILEQHCAQLDAA 824 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF-----RKFAQGLTLDNLVHLANQQ 914 R + ++ + + +Q L + + + + L+ ++ AN + Sbjct: 825 RASLEHALEALGRAREQAGPIHRLADIAAASGPENLASTPLSAWVLIARLEEVLAAANPR 884 Query: 915 LTRLH-GRYLLQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 L + GRY L + L + +VD DA+R RTLSGGE+F SLALAL Sbjct: 885 LAAISSGRYELVSVPDDGTASRKSGLGLAIVDHDT-DALRSPRTLSGGETFYTSLALALG 943 Query: 967 LSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 L+D+VS + ++F+DEGFG+LDS TL + L AL +G+T+GVISHVE M + Sbjct: 944 LADVVSAEAGGVELRTMFIDEGFGSLDSHTLSLVMAQLQALRCAGRTVGVISHVEEMATQ 1003 Query: 1024 IPVQIKVKKINGLGY 1038 I QI+V+ + G Sbjct: 1004 IADQIQVRPLPEGGS 1018 >UniRef50_C9P6Y7 Exonuclease SbcC n=6 Tax=Vibrio RepID=C9P6Y7_VIBME Length = 1014 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 238/1065 (22%), Positives = 403/1065 (37%), Gaps = 73/1065 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ ++L L+ + +DF+ F LF I GPTGAGK++LLDAIC ALY ET Sbjct: 1 MRPITLTLQAFGPFASQQVVDFS--AFGHAPLFLINGPTGAGKSSLLDAICYALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR------V 114 D+ E FE+ ++ S ++ + G + + Sbjct: 59 SERTGDQMRCDYAPDSVLTEIEFVFELHQRRFKIIRSPDQQVAKQRGEGTTKKSHAASLI 118 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 EL + K+LA K L GLD +F + M++ QG+F L A KER ++ Sbjct: 119 ELIANEEEKLLAHSPKRVAAAVLELIGLDVKQFRQVMVIPQGKFRELLVANSKEREQIFG 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEK 233 +L T IY QI +FE+ R + E+ Q G + ++ + L +L + K Sbjct: 179 QLFQTHIYTQIERELFERAAEIRRQKEQFDQQIKGALNVVAMASEEELQQALTSIEPSLK 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + QQ QQ L+ L +Q QE + +Q E+ + Q A L Q Sbjct: 239 NSEQSHQQAQQKLDVLKQQWHAGQELQAKFSQQEQLALEQAQLTAQQAELDEWQVRLQQD 298 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 R+ L+ +RQQ+ ++ + + + QQ +Q+ Sbjct: 299 QKAARLDLPYQQLSDVRQQLTLAEQAQKTHQQAVSQTQQQVTVATVAYQQAEQAAQQIEA 358 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL--AAITLTLTADEV 411 + Q + W Q+ L + T +Q L + Sbjct: 359 LSQQLYQLESMGKKWVELEQQRHQQTNALAALKAAQTQHQQLKKHLTDLEQQRQDQQQAL 418 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 ++Q + + L+ I +L Q ++ + Q + Q+ + Sbjct: 419 ERVISQRSGLETKQLQCSQLNEHI-----QLRVNQQSLTQQINQLQQAYQQAGQAYQQAQ 473 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 ++T Q + E +L G PCP+CGS HP + + +Q + Sbjct: 474 QQTLQASQHADQLEFYWHSNQAAELAQKLAPGNPCPVCGSEHHPHIAQFSGQMVSKDQVQ 533 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 + + E KQ Q+ EN +Q + +Q + Sbjct: 534 QARQAQQHHQANE---------TEQLKQYQKAENNLSHYQQQLKQFEEQIE--------- 575 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 P L A + L +R L ++QQ+ Q L Sbjct: 576 ----HKALPELTALQHQHQALTAEIERLTLLN--------PQTFEQQLSQITAALQQAQL 623 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 + ++ Q + S Q E+ + Q+ + + Sbjct: 624 QLEQQQHKVEQASKAEIEAQTKVTSLQ---AEVASEFTDAAQVREAYGRVKKQITALQQA 680 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 E + + + + +QQ S Q+ ++ AL S F + +L Sbjct: 681 ELQARTQLAAAQQALSSAQASLISAEQQAKHWLDSEQRLAQEWQAALNDSAFSSLEDYLQ 740 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A + E+T +EQ + E + Q A+ L + + + Sbjct: 741 AKLAEETRLSIEQKVRQFEQRLATLQGQWEALAKEL----------HNQTPPNLTEFKAA 790 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 + Q + E+R + + TL Q Q+ ++ + +G L+ + + Sbjct: 791 VEQQQAHVTLCLQQLSEVRSRYDSLRQVSDKLVTLYQNNVQLEKEYQIYGTLSDIANGRT 850 Query: 892 GDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQ 941 G K +F G+ LD+++ A+Q+L R+ GRY L+RK L++ V D + Sbjct: 851 GAKVSLHRFVLGVLLDDVLIQASQRLQRMSKGRYWLKRKEDRAKGNAGSGLDLMVEDGYT 910 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTAL 998 RD TLSGGESF+ +LALAL LSD+V S R+D+LF+DEGFG+LD E+LD A+ Sbjct: 911 G-KWRDVATLSGGESFMAALALALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAI 969 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L L G+ IG+ISHV +KE+I +++ + KL Sbjct: 970 QTLVDLQQGGRCIGIISHVAELKEQIALRLDIVTSTLGSSIKLVV 1014 >UniRef50_A1K1W2 Exonuclease SbcC, putative n=1 Tax=Azoarcus sp. BH72 RepID=A1K1W2_AZOSB Length = 1023 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 229/1075 (21%), Positives = 385/1075 (35%), Gaps = 84/1075 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L L+ G +IDFT LF I+GPTGAGKT++LD I ALY +T Sbjct: 1 MKPLKLSLQAFGPFAGREEIDFT--LLPEGALFLISGPTGAGKTSILDGITYALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV-------PR 113 ++ E EF + YR + R R Sbjct: 59 GERSAREMRSHHADAALLTEVEFEFALGARRYRVRRVPEQERAAQRATKSGDGLVKVLAR 118 Query: 114 VELARCADGKI----LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 EL R D + LA K + L G +F + +LL QGQF L A ER Sbjct: 119 AELHRLDDDGVTWLPLAHKTTEVTSELTALLGCQAEQFRQVVLLPQGQFRKLLTASSGER 178 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ--------VQSL 221 ++LE L GT Y ++ + ++ ++ + ++ + + + + ++L Sbjct: 179 EKILETLFGTAAYKRLQDALKQEAQALQKAADETRLRRDTLLQQAAAESVEGLRGQAEAL 238 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 A L L EE +A Q +L E AL A + Sbjct: 239 DAELTRLAGEESAARSADTAAQAALQQGRALAAQFAEQHAAGAALAAVEARAGEIAALRL 298 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + A+ A + P E A LA RQ+ E R+ + A R A Sbjct: 299 REAAARRALQVVPADEACAGAGRQLALARQRAAEAGERVATAAAAMQQARAGLEADKARA 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q+ + LQ Q A R ++++ + Q A + AA Sbjct: 359 PQRDTAQRELLQLEALAAQVEQLAAAERELAARRSQAAAAEQALAQARHAAAEAEQGRAA 418 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + + + A A+ R + Q + ++ E T A Sbjct: 419 LVVRVDQLAPRAAEAEALALRVAQAEQREADAQRLAARR----------KALAEATAAEA 468 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + D + + R L G PCP+CGS HP + Sbjct: 469 QARQAMDAARAALDAARDAQQALDGLWREAQAAILARHLHDGAPCPVCGSAVHPGPATHA 528 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P + R A + + + Q A+ + Sbjct: 529 GELPSESALREAAARSR----------------EAEQGFEARRAAFDRAAQARTAVEAEV 572 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 A++ +L ++ +L+ ++A Q + ++ Sbjct: 573 GALSGALRTAGDDGVQADMLVET-------------AADLRQRLAVARQAGAELTAARDR 619 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 Q L A +S + + + R+ + A L L+T Sbjct: 620 LQALEQAQRNALAAQEQAATAAQSAASALHGAERVVEARREAVPAALRPAGALAAALKTA 679 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + A H+Q+ TL Q + A +L++AQA F AL A+ Sbjct: 680 RSALDTLLAASQQAQAAHAGAEAALAAAHAQRDTLAQAETEQAAALEQAQAVFARALAAA 739 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 FDD+ + AA + + L + + A+ + + + +A Sbjct: 740 AFDDEAGYRAARLAAADIDHLAASLRQHDEDAAAARERLARADQAVAGR----------T 789 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + +++ + ++R L++ L + A + + G Sbjct: 790 PPQLAELETSAQAARAAIDAVLARSADLRGALEKTRHTLALLDELAARNADIEARYRITG 849 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EA 931 L ++ G F+++ LD+++ A+ +L + GRYLLQR+ Sbjct: 850 ELAAVANGDNGRNLTFQRYVLAALLDDVLRAASLRLKAMSRGRYLLQRREEVADARRAAG 909 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L++EV+D + R TLSGGE F+ SL+LAL LSD+V + ++D+LF+DEGFG+ Sbjct: 910 LDLEVLDDYTG-RARPVATLSGGEGFMASLSLALGLSDVVQAYAGGVQLDTLFIDEGFGS 968 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD E+LD A+ L L G+ +GVISHVE MK++I V I+V + ++ Sbjct: 969 LDPESLDMAMRTLIDLQRQGRMVGVISHVEEMKQQIDVAIEVVQGVRGSRVRVRG 1023 >UniRef50_A8VW67 Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW67_9BACI Length = 1121 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 215/1137 (18%), Positives = 425/1137 (37%), Gaps = 109/1137 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L LK ++S K IDF GLF I GPTGAGK+T+LDAI LALY + R Sbjct: 1 MKPIELSLKGIHSFKETQTIDFEE--LTEAGLFGIFGPTGAGKSTILDAITLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARN--QPDGNLQVPRVELAR 118 + ++ + E F + ++ + R+ + Q + Sbjct: 59 APVNKEG---IINHASDEMYTAFIFTLGTGNHQTSYKAERSFKLQKNGSVKQTVSRLIKG 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 LADK D + L GL+ FTR+++L QG+F+ FL K ER ++L+ L Sbjct: 116 VNSPVTLADKASDMDKSVIKLLGLELDDFTRAVVLPQGKFSEFLTLKGTERRKMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG +++A + + +L ++++ +G+ + + + L E+ Sbjct: 176 LEKYGDRLNAKLKHKLDDTAHQLAVIKSEQAGLGDASKTMISDQKKEFENLKKEQIMKKE 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + L + R DEL + Q L Q + + + A L+ A+ A N + Sbjct: 236 QFSKNSDELKKVERWDELSIKLKAVQSELYQFEQDAAEMAHEEARLNQAETALNGQERAR 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 I + + ++Q I+ + + ++Q ++ L E D+ Sbjct: 296 TILDLHRDIEALQQDIQTQLKQKDVVHNEYIEAKKTKDSSDKQMQSEKPILEKQYDEADQ 355 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLR-----------QWQQQLTHAEQKLNALAAITLTL 406 + + + ++ ++ + L+ Q L E+++ L T Sbjct: 356 AIRLIGDRKELTDKHTKLQNEEKELQFSIEQLNNTLRHHQHDLARYEKEVQKLKKDLETY 415 Query: 407 TADEVATALAQHAE-----QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 T E L E ++ L ++ L+ ++ ++ + + + + +E+ Sbjct: 416 TISEEDKRLVNQTEHIISQKKDLNNRIITLNKNLLDITEKQKETKKQTEQIEKEKELCQN 475 Query: 462 ALNEM--------------RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 L++ ++ + + D + ++ + L R +L +PCP Sbjct: 476 KLHDQYGKLQFWYDAFSSYKRTLESAKLIITDNRNRRQKHHQESLLAEIRDRLNPDEPCP 535 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAI----------- 556 LCGS H + L EV +L +E T R +L++ Sbjct: 536 LCGSVHHEVNHLEAFENADEHIPSLDTFVGEVDRLTDEVNTHRIKLESTAENIPLSPENT 595 Query: 557 ------------------TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 + L+R + + Q L + L L Sbjct: 596 SIESGDEVKVPDLYANDFEEGLRRLKQTMHASAQTIGKLYSDVHETLSQLRHHQDQLMTS 655 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHN----------QQIIQYQQQIEQRQQLLLT 648 + L +E ++QL + R + + + +Q Q ++++++L Sbjct: 656 KERLSGIEEQKKQLIMEHSRTDGEMKETEIEWRKHTASIPFKQAEAVVQSLKEKKELYHR 715 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQ----QRQNELTALQNRIQQLTPILETLP-- 702 L P +++ + + +E Q + +L +I+ + +++L Sbjct: 716 ILGRLENARPAIEKKNALINQSNEELYKLQVKKTAAETKLAFQLEQIETIDKSVQSLTDG 775 Query: 703 -----------QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + ++ +Q + + ++ L+ L + + Sbjct: 776 EQPEDIKKRVSEKILYLKERFEKADQDVQQKEKDLQRISNELIRLESNLESKNSFLNEQE 835 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 F L + F D + L + + L + ++ + + +Q + Q Sbjct: 836 QSFHNWLDETSFKDAKDVLEHTVPKAELEKQKERLNERKEAYKNSQESYRTIKNEMDNLQ 895 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 E+I+QE + +++ + G +Q+++ ++ L ++ Sbjct: 896 L--------TEAAREEIRQESRRLEKEMEDLYDRVGRKKQEIESLVKRAERYDVLEKERM 947 Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEA 931 + +ED L + G +F +F L + LA+++L L + Sbjct: 948 TVVSLLEDLEKLQIVF---RGKQFVEFIAEEQLIQVSRLASERLYELTKG-KFAIEIDSD 1003 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTL 989 + D R +LSGGE+F+ SLALALALS + + ++ FLDEGFGTL Sbjct: 1004 GGFVIRDDANGGIRRPVSSLSGGETFITSLALALALSMTIQLKGQHPLEFFFLDEGFGTL 1063 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLESTF 1045 D L+T + AL+ L S ++G+ISHV+ ++ERIP ++ V G SK+ Sbjct: 1064 DEHLLETVIGALERLQTSDLSVGIISHVKELRERIPRKLLVTSSVPGGAGSKVTIEH 1120 >UniRef50_Q9KM67 Nuclease sbcCD subunit C n=29 Tax=Vibrio RepID=SBCC_VIBCH Length = 1013 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 232/1061 (21%), Positives = 419/1061 (39%), Gaps = 70/1061 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ G +IDFT+ LF I G TGAGK+++LDAIC ALY ET Sbjct: 1 MRPLKLILQAFGPFAGREEIDFTK--LGDAPLFLINGATGAGKSSILDAICYALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV-----PRVE 115 + EFE+ G Y+ ++ + G + Sbjct: 59 SERTGDQMRCDYAAPESLTEVIFEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLV 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + +++A+K + L GLD +F + M+L QG+F L A KER ++ + Sbjct: 119 ALKSDGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQ 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG-VTLLTPEQVQSLTASLQVLTDEEKQ 234 L T++Y QI +FE+ R E E+ Q G ++++ E + L L L Sbjct: 179 LFQTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTH 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 + + EQQ + + E ++ QQ + E Q Q + + + R Sbjct: 239 AQSQLKAEQQQWDETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQ 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 R+ ++ +++ ++ + ++ A Q + QQ Q + +E Sbjct: 299 KAARLTAVHQQWHQAQKNLQQAKLKV----EQQQTLLQQAKAQQQQAQQASQQASLACEE 354 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + + + Q + ++ + + +++L A Q L + L + Sbjct: 355 VPKLNEQRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQQASEKLEQELQNQR 414 Query: 415 LAQHAEQRPL-RQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 L +QR L R + + QQ + + + ++ N Q Q + + + Sbjct: 415 LEWEQQQRQLTRLEVQKARMNQLVQQVQAREREQSLLNELQTAQQALLRFEQQHHHIQTQ 474 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 +Q E + L +PCP+CGS HP Y Q Sbjct: 475 AEQAKLTADKLEFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQA 534 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 + + + A +Q + E AQ+L LT Q A+ L Q Sbjct: 535 RQ-----QQQDWVQRQQEAFHAWQQQGFKTEQIAQNLTTLSSELTLQQVALLNELIEQQQ 589 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 L L + +QI + +Q++ + L Sbjct: 590 ILHSDIAALQQLNP------------------DLLKRQIEEGEQRLAHTKMTLEKQNQNQ 631 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + ++ LA+ +Q E+ + + L + + E+ E Sbjct: 632 QQAWQTLAQLQAELASLRQ----------EIPPELSDLDTLRSAIGRVQNQIEILQKAEH 681 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 E W Q +Q ++ + Q + + + ++ + + L S F D+ A+LAA Sbjct: 682 TAREQWVQAQKQFASVQAAYQAAIEAHRESQRQQEETTSAWQQGLLHSGFSDESAYLAAR 741 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + ++ + +E+ E + + LA+ + +E + ++ Sbjct: 742 LTDEAIVNIERQIAQYEERSAMLSGEQQALSRKLAEKNR----------PELEPLLVKVT 791 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 Q +K+ + + + ++ +Q L Q+ + + + G L+ + K G Sbjct: 792 QAEEKMALALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGTLSDIANGKTGA 851 Query: 894 K--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS-------EALEVEVVDTWQAD 943 K +F G+ LD+++ A+Q+L ++ GRYLL+RK L++ V D++ Sbjct: 852 KVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGLDLMVEDSYSG- 910 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 RD TLSGGESF+ +L+LAL LSD+V S R+D+LF+DEGFG+LD E+LD A+ Sbjct: 911 KWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTLFIDEGFGSLDPESLDLAIQT 970 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 L L G+TIG+ISHV +KE+I +++ V +L Sbjct: 971 LIDLQQGGRTIGIISHVTELKEQIGLRLDVLATRMGSTLRL 1011 >UniRef50_B0A864 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A864_9CLOT Length = 1176 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 196/1197 (16%), Positives = 451/1197 (37%), Gaps = 172/1197 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + LNS + +DF+ S GLF I G TG+GK+T+LDAI +A+Y R Sbjct: 1 MRPIRLEISGLNSYIEKQVVDFSE--LTSRGLFGIFGKTGSGKSTILDAITIAMYGNISR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKG----EAYRAFWSQNRARNQPDGNLQVPRVEL 116 + + + + FE+ Y R+++ + + E+ Sbjct: 59 D------TKEYINTSSDSAKIKYVFEIGNKHNKRRYCVERDFRRSKSGTANSSRAILTEI 112 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 ++A++ + + + GL FTRS++L QG+F+ FL +R E+LE + Sbjct: 113 HMDNTESVIAEQKMNVDKAIIDIVGLTASDFTRSVVLPQGKFSEFLQLDDSKRREMLERI 172 Query: 177 TGTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 E YG+ ++ + + + ++E L+ + E + L L + + Sbjct: 173 FNLEKYGRSLTEKIKNKRDGKKIDIEVLENSLLQYDGTSQEIFDETYSKLTELQALSRDM 232 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + ++ N QQ ++ + + + + + + A+ + PH Sbjct: 233 RRELDEAEKKYNDYKEIIGYQQSLEEKENKKLKLDEKSKIIEENKEKVERSGHAKIINPH 292 Query: 296 WERIAEHSA-------ALAHIRQQIEEVNTRLQSTMALRASIRHH--------------- 333 + + + LA + + +N +ST +H Sbjct: 293 IKNVQDFEKSISQYSTELATLESECTSLNREYESTKLKYEQAQHEKDSKLEGLISSKQKF 352 Query: 334 ---------------------------------AAKQSAELQQQQQSLNTWLQEHDRFRQ 360 AK+ L ++ ++ +++E++ Sbjct: 353 ERAIIIQEKIKDIISKIDALKSKIYDYEKEKSNLAKEIEALDEKNTQVSNFIKENESKIS 412 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 ++ + + + + +++ ++ + L +L ++ A Sbjct: 413 SLRTSEDFKEKVYKAFEVEKEYLRIKKEFEENQKDIPVLTKELDSLKSNFRYAENATKDV 472 Query: 421 QRPLRQ---------------------------HLVALHGQIVPQQKRLAQLQVAIQNVT 453 + L+ +L L+ + + +L QLQ Sbjct: 473 KTELKNANEKYDILVSKSPGTNDEIVVMSNKATNLKTLYEKTKRNESKLEQLQEKFNKDK 532 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 +E+ + + + +++ ++ + ++ +E + + +LQ G+PCP+CGS Sbjct: 533 EEKFKLDREVKSLKEELEKYKNERTSLEKNLNEEKFLNLANELKNELQDGKPCPVCGSMH 592 Query: 514 HPAVEAYQA-LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP ++ + + ++ +E +++++ ++ + Q + + E+ +++ Sbjct: 593 HPNIDKINNNDKINYIEEQIRKVEQKIEEITKDYDSSIRQQSKLLSTISMTEDSINEIKR 652 Query: 573 DE-------------------QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR 613 + +L ++ T + + + +++ + +++ E +L Sbjct: 653 EIGDSKSSDINDDLNMLSREIISLREKIADWTENKEKLEEQIKELEKTKNKREKEELELS 712 Query: 614 L-----------------------------------------LSQRHELQGQIAAHNQQI 632 L ++ E + + ++I Sbjct: 713 KDILNKSDNLNSLKENVDKIGKNYDTIKKEYLYLVSNLKIDNLKEKVEEINKNSRIIEEI 772 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 + +++ +++ + L + D+ S L + + L + + Sbjct: 773 EKENSELKLKKEGIEADLKLKRDNFIELDKNISSLNKENESNLKDKSENETEFNLITKGE 832 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 +L+ + E E + + + L S+ ++ + + + ++ Sbjct: 833 NPRHLLDNILDEIERITSTEAKLRVQVEEEKYKVEKLKSKTSEVKGKLQESKIKYKTSKE 892 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 L F D A AL+DE+ +L+ + E + R + E L Sbjct: 893 TLKDLLIEYKFRDIYAVKNALIDEEEREKLKDEIEFYEKEERALTIEIQNLKEKLHGKTI 952 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + + I+++ + + E T G + ++ N ++ + L +Q+ + Sbjct: 953 NLDEFLD--------IEKKKYKLGDDIDEITKQIGAKQNEVITLEKNLKKVKELQKQLDE 1004 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEA 931 ++E + L+ +G +F +F L+ +V A+++L + GRY+L+ + Sbjct: 1005 SEHKLELLKEIEKLL---QGKRFVEFVAKNQLEYIVIEASKRLDIMTKGRYVLEI--DDN 1059 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTL 989 L + D + R +TLSGGE+FL SLALALALS + ++ FLDEGFG+L Sbjct: 1060 LNFVIRDNYNGGLRRSIKTLSGGETFLTSLALALALSSQIQLKGSAPLEFFFLDEGFGSL 1119 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 DSE LD +++L+ L++ ++G+ISHVE +K R+PV++ V +G SK+ ++ Sbjct: 1120 DSELLDIVMESLEKLHSEKLSVGIISHVEELKNRVPVKLLVTPNDGGNGSKISIEYS 1176 >UniRef50_C0WRN7 Exonuclease SbcC n=2 Tax=Lactobacillus RepID=C0WRN7_LACBU Length = 1045 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 214/1079 (19%), Positives = 407/1079 (37%), Gaps = 73/1079 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L LKN + E IDFT+ +F I+G TG+GKTT+ DA+ ALY ++ Sbjct: 1 MKPLKLTLKNFGPYENE-IIDFTK--LDEASVFLISGKTGSGKTTIFDAMTFALYGDSAS 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ-----VPRVE 115 QS + FE +G+ YR + ++ G ++E Sbjct: 58 DDRTPQSMRSDFADTKTPTEVTLLFEHQGQTYRINRFPKQELDKKRGTGTKIFESSGKLE 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + K++D + + +F + +LL QG+F FL A ++ ++L + Sbjct: 118 IFKDGKKADEMTKMRDINLKLLDVLQISREQFVQIVLLPQGEFRRFLTASSSDKEDVLRK 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG---------------VTLLTPEQVQS 220 + T++Y + S + + K T+ + + +Q+ Sbjct: 178 IFRTQLYQRWSDALRDMLKKQNTKNKDAKQAIDNDLAKVVWLDDAPDDVKARNANDQIAI 237 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 L+ + K L Q Q+ ++ E +R+ L ++ + Sbjct: 238 LSQQQSQANTDLKDLKAQHQSAQKRYEEANQKFHADGEMNRQINQLADQRHQQVDLKALQ 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 + + + ++ + +L+ + KQS Sbjct: 298 PQYDQLREQVAQLEWAKDLKPKYEQFQELQSDVSNDQRKLKEVNETSQTQTKALEKQSK- 356 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 QQ +L E ++ + R F Q + R+ L+Q + + +KL Sbjct: 357 ---QQINLQAEKPEQEQRLSQKSVLENQRPIFKQASELRDQLKQAKAVVEKTGRKLETKQ 413 Query: 401 AITLTLTAD--EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 LT ++ L Q L + K+L +L + Q + + + Sbjct: 414 KRVADLTKQNDQITEKLTQVVGLTEQLNELTQTFQTLETASKQLTKLDLDQQTNHELKVR 473 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 + NE+ + + T + QL+ G PCP+CGST HP+ Sbjct: 474 IGHSQNELLE-LTTQVDHAQTAYTALRNNWLSNQIVNLVKQLEPGSPCPVCGSTDHPSPA 532 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 A P V+ + E +++L + AT R +++ KQ + + + S Sbjct: 533 HV-ADLPHVSDDDIKTAEAHLQQLQNQQATDRTKINEQVKQSDKQDQQINS------TFK 585 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 + + A + P D++E+ LR + Q + A ++ + +Q Sbjct: 586 ELVAELMAEHILQETPDSLAAVSQQVADDNEKNLRERHVIQKQQDDLKAEQEKQVHIKQD 645 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 ++Q + Y +T+Q+ + L + + + L L Sbjct: 646 LDQLMPQVDQLKADYQNA----------QSTQQKYDVRLDDVAHRLPSEFSDLASLDQHL 695 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA- 757 L Q+ A + + +L++Q + Q A Sbjct: 696 GKLQQAIADYDQAVETNRNQLENTKRTLAASQATEISLKKQIDHTRGKIDVIQNDITAAV 755 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L+ ++ + L L++ + ++Q + ++ + + +HQ Sbjct: 756 LKKFGTKSWDMLEKSVKNVSQLADLQKQIDHYQDQLKNVAASISTYEKIVGEHQL----- 810 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 V +++ Q +LAQ Q + E +Q + + ++ + I + + Sbjct: 811 -----VDLKEEQTQLAQLVQARDQLQDQYDEKYRQTLINDELLKRVKKNDHAIHDQQETI 865 Query: 878 EDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------K 927 L + K ++ L ++ +ANQ L +L GRY +Q + Sbjct: 866 NQLQLLVETVNGSGDAKLGLERYVLQAQLKEILKVANQHLKQLSSGRYAMQLHKEAGAYQ 925 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 + LE++V D +R TLSGGESF+ +L+LALAL +++ S ID+LF+DE Sbjct: 926 KNTGLEIDVYD-DNVGQLRSVHTLSGGESFIAALSLALALGEVIQNESGGISIDTLFVDE 984 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 GFG+LD E+L A+ AL+ + + + IG+ISHV ++ERIP QI+V+ G G S+ + Sbjct: 985 GFGSLDQESLSMAMAALENIESHNRMIGIISHVTMLQERIPYQIQVQ-TEGQGKSRTKI 1042 >UniRef50_C6XKD1 SMC domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKD1_HIRBI Length = 1022 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 203/1076 (18%), Positives = 397/1076 (36%), Gaps = 88/1076 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L+ G+ I+F + GLF I GPTGAGKT++ D +C AL+ ++ Sbjct: 1 MRPIRLTLQAFGPFAGKEVINFEQT--FDVGLFGIYGPTGAGKTSIFDGLCFALFGQSSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + E+ F++ + Y + R G ++ A Sbjct: 59 AQRDGKDFRSDHAPLDMLTEVELVFDLGDKRYVVRRIPAQERLAKKGGKTTQQLHQAWLF 118 Query: 121 D--------------GKILADKVKDKLEL-TATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D GK +A+K +E + L G +F + +LL QGQF L+A Sbjct: 119 DASGLNTQDITDANRGKAIAEKKTSVVEQTISELLGYSADQFRQIILLPQGQFRKVLDAN 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQ-AQASGVTLLTPEQVQSLTAS 224 K+R+++L +L +Y ++ + E+ K+ ++ + + + E ++L + Sbjct: 179 TKDRSQILRQLFDVSLYEKLQDKLKEEAKALHEKVNTARIRRDDRLMQSGHETFEALELA 238 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ ++ K+ A +++ + E + R L++A A+ Q + + Sbjct: 239 IKEAHEQVKKSQAALDAAKKNHSTKRDTLEKAKSNDARFVELEKAKADLITLQANQSDID 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIR---QQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 + E + A L+ + ++ + + + A + ++ Sbjct: 299 ARKADLEKVRRAESLLGLEAGLSRAKLDHKEASQRQIEAKVNLEKAEKANASAKVKLTDI 358 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q+Q + + ++ N + + + + + Q A+Q+ AL Sbjct: 359 QKQTSEIQALSETQNQLNALLNIQKSTISLATDLKTKTDQRKTSHAQANAAKQEQAALKT 418 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L+ A+ + + + + L+ +I Q QN+ + A Sbjct: 419 HLKELST-SAKNAIERGKTIANIEKEIERLNTEI-AANSVYENAQKQTQNLEAKFKSSQA 476 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + + +L + EQ ++L+ G CP+CGS HP + Sbjct: 477 NHLASKAKLENAQTELD----VAEQALANVQALHLASKLKHGDNCPVCGSKDHPKLAKGD 532 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 A G+ + A E K GEE L A Sbjct: 533 ASSQGL-DTAFRAAEKAYKIAGEEERKANDALIADKANYNSSL----------------- 574 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + + L D ++ L ++L L + +I+ ++ I+ ++E Sbjct: 575 -ELFSKLEKPKTESDALKSALHDHSIELKKLNDLPTLEAINQKISLIEREEIEVSNRLET 633 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 E E + ++ + +L LET Sbjct: 634 I-----------------LVEHEKNQLAHNTAQSRYDDAIAKIPTDYQTVGKLEKELETN 676 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + E + R+ + Q+ + A + + A F++AL + Sbjct: 677 KSKIDGFKKELENAEISERETASILSNAQTSLNDKQETENRALKRVNSETANFESALIEA 736 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 D+ +F AA + + + +N +T + Q Q+ Sbjct: 737 KL-DEASFQAAKLLFPKRDAISKAVENHSAALISVKTRIEQAKLATQNVQR--------- 786 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + +Q +++ ++ + + Q+ + Q Q++ ++ + G Sbjct: 787 -EDLTILQHQVSTAETEVDHASNILNTVTQRQLHLKTTLESVQKATQELNKLNAEYAPLG 845 Query: 882 YLNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASE-------A 931 ++ L K FA D+++ ANQ+L + R+ L+R+A Sbjct: 846 EMSDLTNGTNPYKLKLVDFAIAAMYDDVLDAANQRLGPMTDSRFELRREAGGQGGNASRG 905 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L+ + D +++R T +LSGGE FL SLALAL LSD+V S R+D++F+DEGFG+ Sbjct: 906 LDTLIFDAHT-ESLRATSSLSGGEGFLASLALALGLSDVVQQQSGGVRLDAIFIDEGFGS 964 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 LDS LD AL L L + + +G+ISHVE +K IP ++ + KL +T Sbjct: 965 LDSAALDLALQTLHTLADNNRLVGIISHVEEVKRTIPNGFSIEPSTAGSHIKLRTT 1020 >UniRef50_A1R7R6 Putative nuclease sbcCD subunit C n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R7R6_ARTAT Length = 1004 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 208/1075 (19%), Positives = 369/1075 (34%), Gaps = 111/1075 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L ++ IDF ++ GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLDIEAFGPFATPQHIDFD--HLSAQGLFLLNGATGAGKTSILDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG----NLQVPRVEL 116 + AE EF +G + S R G Q + L Sbjct: 59 ARQEGKRLRSDHAAPGAEPRVVCEFSARGRRFEVTRSPAWDRPSARGRNGFTTQQAKTLL 118 Query: 117 AR--CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + + + + + + G+D +FTR ++L QG FAAFL +K +R ELL+ Sbjct: 119 RERVAGSWEEKSSRNDEVGAELSDVLGMDREQFTRVVMLPQGDFAAFLRSKANDRLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL-----------TA 223 +L GT+ + + + Q A +++ ++ + + L T Sbjct: 179 KLFGTQRFEAVERQLVHQAAEAARAVQENASELKLLLDRVASEQDQLGLPAADTSAAGTE 238 Query: 224 SLQVLTDEEKQLITAQQ-QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 Q + + + ++ N + L Q Q+ + + Sbjct: 239 PGQEPEAWLAGVEAEVEAEWKRRQNEAAEAESLSSRLMEHFQEAQEKSQRHGRLGAAMQR 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 L + A + + A + Q+E V++ + A K A Sbjct: 299 RVLLELAAPRALENKEMLGKHRRAAVLSGQLEAVDSAARKLHTASARAAGLREKLDAAGL 358 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 + + + + L+ AE + + Sbjct: 359 DAAKPTIALETVKASCAVLEARLPEEQRLEGITVRLAARRGELAEHLSAAEAAATVVDQL 418 Query: 403 TLTLTADEVATA-LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 ++A E+ L A+Q R+ ++V R A + +T + + Sbjct: 419 REEVSAVELEIQPLEPLADQLAEREREATAAAELVGIVARHATAASELDVITGKHLHARS 478 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 A ++RQ++ + + A L++G+PC +CGS HP Sbjct: 479 ASQDLRQKWLDVRE-----------LRLANAAGELAAALESGKPCAVCGSEEHPNPAQAV 527 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + Q A E + E L + + Q Sbjct: 528 RTALSLAQEEEEARERF----------------------EASERALGLLAEQVSSAAQVL 565 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + A + + S +L+ + A ++I+ Q++ + Sbjct: 566 AGLVAQGGSADAAAAESTLADARAAALAARTAEAS-LEKLRVRHEALIKRIVLAQEEHDA 624 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + Q E+ LA + + S + R L A + +Q L Sbjct: 625 SVGAAAQASAAVHVLQEQCVALETDLAGLRGDFSSLRDRLEALEAERGLLQAAVDADREL 684 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 ++++ A A D AL S Sbjct: 685 ERAEQARQ---------------------------------------DAAASLDKALSES 705 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F ++ + LE+ + + + + L LA + + L Sbjct: 706 GFASADDARREILSPADVVGLEKDLADFDAESSRLDELFGSEDLVLAAKEASIGEHPLG- 764 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + + + A R S G + A R + Q+L Q + + + Sbjct: 765 EAELAESKLHAANAADDARAKALSAGLAGKSAAAVARFRTEYQSLAQAGREPRNRAQMLA 824 Query: 882 YLNSLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKAS 929 L + + +R + L+ + A+++L + GRY LQ R A Sbjct: 825 ELADTVRGSGDNSYRMSLNAYVLAARLEQVATAASERLVAMSDGRYTLQHTDAKAARGAK 884 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 L +EVVD W RDT TLSGGESF+ SL+LAL L+D+V + I++LF+DEGF Sbjct: 885 SGLGLEVVDEWTG-QRRDTSTLSGGESFMASLSLALGLADVVQQEAGGVDIETLFVDEGF 943 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 G+LD + L+ +DAL+ L G+ +G++SHV MK+RI Q++V K ++ Sbjct: 944 GSLDDQALEQVMDALEGLRDGGRVVGLVSHVGEMKQRITNQLQVVKGRHGSSVRI 998 >UniRef50_UPI00006A2B7F UPI00006A2B7F related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2B7F Length = 997 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 274/1057 (25%), Positives = 422/1057 (39%), Gaps = 81/1057 (7%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 KIL +R NL SL G++ +DF P A GLFAI GPTGAGK+TLLDA+ LALY +TPRL Sbjct: 2 KILQIRGSNLASLAGDFNLDFESGPLAEVGLFAIAGPTGAGKSTLLDALSLALYDKTPRL 61 Query: 62 SNVSQ--------------SQNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQPD 106 + S +L+ R LAEV F G YRA WS RARN+ Sbjct: 62 ESNSGYQIPDGPDESLGVNDPRNLLRRGEVNGLAEVRFIGTDGRRYRAHWSVRRARNKVG 121 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ+ ++L G+ LA + L T GL + +F RS+LL+QG FAAFL AK Sbjct: 122 GKLQLSDIQLFDDESGQSLARTKTEVLAATERAVGLTFDQFRRSVLLAQGDFAAFLKAKS 181 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ER+ELLE +TGTE+Y IS + + K L + + +L E +L AS+ Sbjct: 182 DERSELLERMTGTELYSAISKRAYAKVKEIEESLRLREEATKALPILDTEARAALVASID 241 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + + W + +L + ++ L A + A P+ AL+ Sbjct: 242 ELGKTVASTASHLGVLRAQKAWWIQAADLGHKLTQASARLAAATKQWTDAAPRREALADI 301 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + + LR + + L ++Q++ + L A+ S Q + Sbjct: 302 ERVQPLRAIDKEATRTADELDAAQKQLKAAESTLAQARGDDERAASVLAQASKNQTQHRA 361 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 + D+ R + L Q L Sbjct: 362 EAEVTKPQIDKARSLDQAIDERAKALGVTEKKLAEANNDLVVLVKKGQALGEQRTTVAAT 421 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 A A + + Q+ +K + + + Q N A+ Sbjct: 422 LEKLARWVEANGALVALAKGWSEGVAPQLQAFEKTHVTWKAQLAALPSLQLVHNKAVAAQ 481 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 Q ++ A K E+ V +A E Sbjct: 482 VQAQQDLFSIEAAAKAAQER------------------------------VRTAEAAEAA 511 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 S L + L A L+ Q + K + + + + +A Sbjct: 512 HPASNLAGRRTALDALRARLAKLQQQRELALKANKECLENLTHAFGEVEGWQGEIEADPK 571 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + + I+ HE + L+ Q + Q + ++ ++ Sbjct: 572 TFGA--KWIARIEKARQNTQGHESGSKQLADIDTQQEIQVNGLKHSTQQRDALDAERKQ- 628 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 Q E ++ LA RQ+ Q Q E L + + Sbjct: 629 ------------QAAERDALLAQRQEVLQGRPAAQVE---------------AALQAALK 661 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 E ++ E + + +AQ+ + A AL + D Sbjct: 662 ASEQAHAAAAEQAKRTREDATKKGEAHKIAEHAVAKSAQAKELAAKALTEALLTAGLDAA 721 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 DE + + +++ V + L+ HQ + Sbjct: 722 TLRTRLAHDEPWIRRERAALNEVDHLHSSETKAVEERQRDLSAHQAQPAPTLPLVG---- 777 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 I+ LA + E + G +Q+L QD NR + +++ Q ++ W L++L Sbjct: 778 -IEATLATLEPQHGEQSQQLGAAKQRLDQDNQNRATGEAKARELEQARKEATVWQQLDTL 836 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 IGS +G KFRKFAQ +T++ L+ AN +L L RY LQR ++ LE++VVD D +R Sbjct: 837 IGSADGKKFRKFAQSMTMELLLAHANAELASLAPRYALQRVKAQDLELQVVDRDMGDEIR 896 Query: 947 DTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNA 1006 T +LSGGE+FLVSLALAL LS L S K RI+SLF+DEGFG+LD +TL+TAL LD+L + Sbjct: 897 STSSLSGGETFLVSLALALGLSSLASEKVRIESLFIDEGFGSLDPKTLETALATLDSLQS 956 Query: 1007 SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 G+ +G+ISHV + ERI VQ+ V++ G G S + Sbjct: 957 VGRKVGLISHVPGLAERIGVQVLVER-QGQGASTVRI 992 >UniRef50_B4F2Y5 Exonuclease n=3 Tax=Proteus RepID=B4F2Y5_PROMH Length = 1241 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 420/1230 (34%), Positives = 579/1230 (47%), Gaps = 186/1230 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLKGEWKI+F +EPF SNGLFAITGPTGAGKTTLLDAI LALYH TPR Sbjct: 1 MKILSLRFKNINSLKGEWKINFDQEPFVSNGLFAITGPTGAGKTTLLDAISLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 L V+QSQN+LMTR TAECLAEVEFEVKG AYRAFW Q RA + +GNLQ P+ ELA+ Sbjct: 61 LDKVTQSQNELMTRHTAECLAEVEFEVKGVAYRAFWEQRRANYKEEGNLQAPQAELAKIN 120 Query: 120 ---ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + K+LA+K+ E ++TGLD+ RFT+SMLLSQGQFAAFLNA K RAELLEEL Sbjct: 121 RLGGEDKVLANKISQVKEKIISITGLDFDRFTKSMLLSQGQFAAFLNADDKSRAELLEEL 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKL--------------QAQASGVTLLTPEQVQSLT 222 TGT+IY IS +F+ + L L + + Q+ L Sbjct: 181 TGTDIYRHISQTIFKHWREEEQALNTLKQQAQMMALLDATTRQELLTQQANIQTQITRLQ 240 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 Q ++ A + +QQ + E QQ Q +Q+ E + + Sbjct: 241 KEQQEYQVAKQWQEKALEIQQQQQSAQAGLYEAQQALIIAQPDIQRLEKNEPAEKIRPLY 300 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQI----------------------------- 313 + ++ I QQ Sbjct: 301 DEKNRRLTEQNYLATQLTSLKTEKQAIEQQSLPINKKLAAFHEQLKTHHEKKQHTLQLIR 360 Query: 314 --------------------EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 + +L+ A A K+ QQQ LN L Sbjct: 361 EKVLPLDNQLVLLQQEISTNNQHKHKLEKICAEYLQHSQLAEKKLITTQQQVNQLNNDLT 420 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA----- 408 +H Q W+ F Q Q++ T ++K+ +L T Sbjct: 421 QHAYHAQLAENLPLWQHYFQQYNEISNQYLANQKRETAEQEKVISLEKALQQATQTLATQ 480 Query: 409 ---------------------------DEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 DE+ L Q Q+ ++ LH Q+ K Sbjct: 481 QEQLNLQQQQLQSYQTQLEARQKADKPDEIKPRLQQINLQKNALAKIINLHTQLQRNGKE 540 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 Q + Q+ + E KEK Q L D+ ++ E +RA+L Sbjct: 541 QQHYQTTLSENQQKIATLTQTIAENDLALKEKAQHLKDLNDNYLLLQKVAEYEQERARLL 600 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN--------------EVKKLGEEGA 547 +PCPLCGST HP VE Y ++P + RL AL+ ++ G + + Sbjct: 601 KDKPCPLCGSTQHPYVETYHDIKPDETKLRLEALQQQVHSLTITLAEQRTQLVNYGSQNS 660 Query: 548 TLRGQLDAITKQLQRDENEAQSLRQD---------------EQALTQQWQAVTASLNITL 592 TL + +T++ + Q+L Q EQ+L QQ +T L+ Sbjct: 661 TLSDNIAQLTQENSVLTQQWQTLAQAHHLPLVDDADNLLTLEQSLNQQELILTEKLDSYQ 720 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHE--------LQGQIAAHNQQIIQYQQQIEQRQQ 644 Q + Q Q + LQ I + QQ QQ +Q Q Sbjct: 721 QLEAQTHQKNTHFLNAKEQFNQQQQSVKQQQNDLDYLQKTIKTYQQQSEHLHQQQQQLAQ 780 Query: 645 LLLTTLTGYALTLPQEDEEESWLA----------------------------TRQQEAQS 676 + + + TLP+ ++ WLA T+ ++ + Sbjct: 781 HIQSAIEKQGYTLPEFEQFTPWLAARQQEHQQYQSQLKELQLLQQSLREQQVTQNEKKRY 840 Query: 677 WQQRQNELTALQNRI--------------------QQLTPILETLPQSDELPHCEETVVL 716 ++Q EL AL ++ Q + + L + + + Sbjct: 841 LAEKQAELEALLAKLSQQQHQQTQWQDQRQALFGSQSVEQVRSELDKHSQFLQTQIEQYT 900 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + Q+ + L Q Q ++ A Q+A + AL+ S+F D+ FLA+L+ Sbjct: 901 QEKNQLENRLNQLIGQYQENEKALQRAITQAQQATEHYQHALKESLFADENDFLASLLSV 960 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + T+L++ ++ ++ Q +T + + QH +P T EQ L Sbjct: 961 EERTRLQEQQKQRLDKLLQEKTRLETQEKAYQQHLLQQPLLSTQCTA--EQCNIHLDDLA 1018 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 ++ + + ++ QL+QD + R +QQTL+ QIA+ +DW YLN L+GS GDKF Sbjct: 1019 KQHKALQETLFSLQIQLRQDDEKRIEQQTLLAQIAKQQAHYDDWSYLNELVGSASGDKFS 1078 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 +FAQGLTLD+L++LAN++L +LHGRY LQRK + +LE+++ DTWQADA+RDTRTLSGGES Sbjct: 1079 RFAQGLTLDHLIYLANRRLEKLHGRYFLQRKTTGSLELQIADTWQADALRDTRTLSGGES 1138 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSL+LALALSDLVS+KT+I+SLFLDEGFGTLD +TLD ALDALD+LNASGK IGVISH Sbjct: 1139 FLVSLSLALALSDLVSNKTQIESLFLDEGFGTLDPDTLDIALDALDSLNASGKIIGVISH 1198 Query: 1017 VEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 VEAMKERIPVQIKVKK GLG S+L F Sbjct: 1199 VEAMKERIPVQIKVKKAGGLGISQLAPEFR 1228 >UniRef50_C4G2R3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R3_ABIDE Length = 1064 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 175/1098 (15%), Positives = 382/1098 (34%), Gaps = 96/1098 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ S +IDFT+ + LF ITG TGAGKTT+ DAI AL+ E Sbjct: 1 MRPKKLVMQAFGSYGKNTEIDFTK---SKQHLFLITGDTGAGKTTIFDAIVFALFGEASS 57 Query: 61 L--SNVSQSQNDLMTRDTAECLAEVEFEVK----GEAYRAFWSQNRARNQPDGNL---QV 111 + E E F K E Y+ R G Sbjct: 58 GYNKKSGEELQSQFVDYGNEPFVEFTFTEKVGSTEEEYKVRRIPKHIRPYKKGREGYTDE 117 Query: 112 PRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 D + +K+ + L +F + +++QG+F L ++ Sbjct: 118 KEKVSLFFPDNTEYSQNLKETNSKIEEIIKLTKNQFMQVSMIAQGEFMEVLR--GSDKQA 175 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ------------------------- 206 + +L TEIY I + + +T L++ +Q Sbjct: 176 IFRKLFNTEIYQNIIKELKLKSDDKKTLLKEFTSQCKLLISGIRVPEAMREGYNFFDTKK 235 Query: 207 ------ASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEAS 260 L + L ++ E+K+L + ++ + L + L E Sbjct: 236 ETDITDIEKARLSLFNLCKELNKIIKTKETEDKELFAKRDKKTRELAEGEQLLGLFAELE 295 Query: 261 RRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRL 320 + + +++ +++E+ + A + E + +++ ++L Sbjct: 296 KAELEVKELESKKEEIVKLTKLAKDIEAAYEINNCHTGFVEADKSFLEAATELKLKKSKL 355 Query: 321 QSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE 380 + + N ++ + + N + + + ++RE Sbjct: 356 PELTLNYEDLCKKEEVAKMGYSTAVEEFNRISEKVRKNLESFNNIEARKKDKTGKEAERE 415 Query: 381 HLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQK 440 + +++ + +L A+ + + + Sbjct: 416 KAAKEREEAKLRLENFESLEQSW--------NEAVKELSVFEKMYSVAENKVHSCEKADN 467 Query: 441 RLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL 500 L L A++ + E+ + N + ++ + ++ R L Sbjct: 468 ELKALTEAVRELALEKNKLKKYQNAYEVEFNRFKSAEDELISKRRLFYDLRAGIIARDLL 527 Query: 501 QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 + G+PCP+CGS SHP+ E + + + LE V L ++ T +L+ ++ Sbjct: 528 KEGEPCPVCGSVSHPSPCKLTEGEDEITKEEVDKLEERVSGLKDKVNTGLSKLEGCKIKI 587 Query: 561 QRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 E +TA ++ +++ + + E L Sbjct: 588 TEREGY-----------------LTADKKKLIRLINEELFAFECETSGEDNTDLEKLGAG 630 Query: 621 LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR 680 ++ H +++ + +I++ + + +++ + + + Sbjct: 631 IKLFSDKHQKELSELDIKIKEIKSIEEK-------LSTAGEKKNLLRQAEEAAREKEAET 683 Query: 681 QNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE-NWRQVHEQCLALHSQQQTLQQQ 739 EL+ + + I++L LE + + L + V+++ + ++L+++ Sbjct: 684 AKELSGIDSVIKELEAGLEYNTKEEALEAEAVKEREKIKTETVYKEFENKAKEAKSLKER 743 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ--AQ 797 L+ + ++ + + E + + + +E Q Sbjct: 744 TETLIVKLEADLPLLEKTVETKRLEYANTMENKNLSENEWQDIVKEHKKIEKDEFQSIIN 803 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 T + + + + V ++Q+E + + T E+R + K D Sbjct: 804 TYAGNKTASENMVIKMKEATKDKVKPDVSELQKEFESVEEAYKNLHTELEEMRAEYKTDE 863 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYL-NSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQ 914 D ++ + + + +++ L L G+ G + F Q L+ ++ AN++ Sbjct: 864 DILKKLDSALAERGAASEEYGIINNLYAKLSGNVSGARMDIETFVQRKYLEKILVSANKR 923 Query: 915 LTRLH-GRYLLQ--------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 + G++ L+ + L++ V RD RTLSGGESF+ +L+LAL Sbjct: 924 FANMSAGQFELRTYGLEKAGEGKNRGLDLMVYSALNG-KCRDVRTLSGGESFMAALSLAL 982 Query: 966 ALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 ++D + S ++ +F+DEGFGTLD + + A+ L + K IG+ISHV +K+ Sbjct: 983 GMADRIQERSGAVNLEMMFVDEGFGTLDDNSRNQAVKILKNMAGGSKLIGIISHVSELKQ 1042 Query: 1023 RIPVQIKVKKINGLGYSK 1040 I Q+ V K ++ Sbjct: 1043 EIEEQLIVTKDENGSRAR 1060 >UniRef50_C2EEA6 Exonuclease n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EEA6_9LACO Length = 1034 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 195/1076 (18%), Positives = 426/1076 (39%), Gaps = 73/1076 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L++KN + ++DFT+ F+ LF ITG TG+GKTT+ DA+C ALY + Sbjct: 1 MKPLKLKMKNFGPYEDA-EVDFTK--FSEAPLFLITGATGSGKTTIFDAMCFALYGRSST 57 Query: 61 LSNVSQSQ--NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR-ARNQPDGNLQVPRVELA 117 + + +D + + E+ F +G+ Y S + A + +G + + Sbjct: 58 DKDRNVFLLRSDFVKDCKEKTEVELTFSHQGKEYTVNRSFYQTAGQEKNGKITKKAILRY 117 Query: 118 RCADGKILA-DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + DG ++ + +L L +F++ +LL QG+F FL + ++ ++L ++ Sbjct: 118 QDEDGNLVELKGPNEIGVKVTSLLNLSAEQFSKIILLPQGKFKEFLMSDSNKKEKILNQI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQA------------SGVTLLTPEQVQSLTAS 224 GT+ Y + + +Q +R++ ++ Q + + +L Sbjct: 178 FGTDFYDDWVSEIKKQADESRSDSDEAQKELLFEQKQAIFSEAEPEAEPVEDWFDALDLQ 237 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 ++ + + A+++ Q+ +N ++ L + + Q ++ ++E + + A ++ Sbjct: 238 IKSDEENCAKAKEAEEETQKKVNEALKKMALAERLEQDFQEFEEVSRKKELLEREQAKIN 297 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 ++++EE+ ++ A + + +K + Sbjct: 298 EQTNYLAELNWAFGCETMVFRKKTSQKRLEELRADIERQNAEFSETKEKFSKAL----ET 353 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 +QSL + D+ + N G + + L Q Q + +KL A Sbjct: 354 KQSLLREAPQKDKVQADFNLWQGRVGIYDEAEQKNAELADLQAQADKSSKKLAEKKAELE 413 Query: 405 T--LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + + + + +++ + L Q+ +K+L +V Q Q Sbjct: 414 RKIASKNALDEFIEKNSGAADEKHCLELEIQQLKENEKKLQDYKVQQQKA-QVLKNEQVV 472 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 L + E + + + + L+ G+ CP+CGS HP+ Sbjct: 473 LEKESTEASELQKTAEQEYENIQSQWAKLQINELAKLLKPGEACPVCGSLEHPSPAFGDE 532 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 V ++++ + + + + + + + DA +K+ + + ++ Sbjct: 533 KTVYVTENQVKKAKEKHDEAVADASEKKAKADAKSKEFSERQADF----------LEKIT 582 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + SL + +++ LDA + LSQ E + ++ Q +IE+ Sbjct: 583 EFSRSLGYDTIEISELEKKLDA--KRSDNEEKLSQARETARKRTEAEVKLKTLQTEIERG 640 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++L+ + +++ LA + +L ++L L Sbjct: 641 EELVSDLKQELSECQATISGKKAGLAEL----------EKQLPKQFKTRKELQEQLNQWD 690 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + + ++ + + ++ +L S + + ++ + ++A Sbjct: 691 EFVKKYDADKENNDKEISDLDKRRASLQSLIEKENINLGNESNLFHASEKEIESACLKKG 750 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + + L +L K + R+ + A ++ + + Sbjct: 751 -----------ISAERLYELLAEKDRIAEIEREISDFQKKEATVSGEYAASQKKIDGKIR 799 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +E+++Q ++ R + L ++ + R++ + + + + + E Sbjct: 800 PNIEEMKQIQRDEQERHRRAKEFLQQSDNLLNKNRECRRKAEKVWKNSKEKLELAERKQS 859 Query: 883 LNSLIGSKEGD--KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------SEAL 932 L +++ ++G F +F +++ +AN L +L GRY L + L Sbjct: 860 LYNVLRGQKGIAPGFSRFVLANYFRSVIEVANIHLDKLTGGRYNLVLDDTAKANLKNMGL 919 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTL 989 E++V D A R TLSGGESF+ SL+LA+AL +++ I+++F+DEGFGTL Sbjct: 920 ELDVYD-DNAGVNRPVHTLSGGESFIFSLSLAMALGEVIQERNGGISIEAMFIDEGFGTL 978 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 D E L + L AL +L + + IG+ISHV+ KE+IP QI+V G+ ++ F Sbjct: 979 DDERLQSVLSALQSLENNNRMIGIISHVDKFKEQIPAQIQVTSKEGISTIGYQTEF 1034 >UniRef50_C0YU05 Exonuclease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YU05_9FLAO Length = 1011 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 193/1044 (18%), Positives = 397/1044 (38%), Gaps = 42/1044 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + IDF GLF I G G+GK+++L+AI ALY ET R Sbjct: 1 MIPVQLTIEGLYSYRERQTIDFRN--LTEAGLFGIFGAVGSGKSSVLEAISFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L+ + ++M + E +F + + +RA R + + Sbjct: 59 LNMRDKRAYNMMNLKSNSSYIEFDFVNYENKLFRATRDFKRNSKKFEEVKPNAVTFYENI 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 I + + GL Y F R++++ QGQF FL ER +++E+ Sbjct: 119 DGKWIPLEHSNA-----EAIIGLSYSNFKRTIIIPQGQFKEFLELGAAERTNMMKEIFNL 173 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + + + V + R+EL++L+ Q G + E+++ L + + Sbjct: 174 QKF-DLQNNVSALNVKNRSELDQLEGQLKGFEDINEEKIKIQKEELTEEQKKLSEANKKL 232 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL-RPHWER 298 ++ Q+ L + ++ + E+ + A L + P Sbjct: 233 EKISQTYQQLKNLKSDFESLQLNKEKFSKLSEEKPQMDALEAKAELYDHIFRIFNPLIIE 292 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + S +A R + E+ Q T I+ A + + +QS + + Sbjct: 293 KNKLSKEIADKRNEKEQQIKIWQETEKAFTVIKKKLAALEPQFKALEQS-KIQENDMNLI 351 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 Q + + E +++ + ++ ++ LA TL ++ +AL Sbjct: 352 VQILKFSEEIKTLNERTRKGSEKVKEVDLNKENIQKTIDELAVQIKTLKEQKLDSALLSE 411 Query: 419 AEQRPLRQH-LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 ++Q L + Q V + + + I + ++ R R + + Sbjct: 412 VGNWFIQQKNLKKIQQQQVEKVVQQQKQISEIGEELKPFGYHENYKDDFRIRKETLEAKR 471 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 ++ + K L A+L G+ CPLCGS HP + + + Sbjct: 472 KELSLKLDHLKIQKELSRFAAELHDGENCPLCGSKEHPHIVEFHDVNI------------ 519 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E++++ E T+ +L A+ KQ E + E+ LT + + + + Sbjct: 520 ELQEIQENITTVEQELTAVQKQESEIEKILDRKKIFEEQLTSEQKTLLRIQKDIEHHILS 579 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + D E + S L+ +I + I ++ +E+ + L + Sbjct: 580 FTWKQFSHDLEEEFEKKRSDSFTLEKKIEETERNIALEREALEKENKTLEKYKSALEAFR 639 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 +E ++ + + + Q ++ + L QS++ E Sbjct: 640 LEEVSKQEQINISRSGLKILDWNLY----AQKTTSEIEDAYQKLVQSNKETEENYNKASE 695 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 + + + + ++Q + + ++ AL F + + L+ E Sbjct: 696 QEKILSPKLTEQKTIVSQTEKQITELEKEISANESAIAKALADQNFTEFKEVENILLQEI 755 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + + QN + + + + + L L +Q+L Q Sbjct: 756 NIQVVRTQIQNFKIEFEALKKFIGELELKLKGLSFDSNQFSL--------AEQQLTQAQN 807 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 + ++ + S ++++ +++ L++ +A++ ++ E+ + +L F + Sbjct: 808 EQKQISDSVVTKAAEIERLEKEFVKKEELLKALAKLQKRSENLKVMMNLFKGA---GFVQ 864 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + + L L AN + R+ R L + +E + E++D R +TLSGG++F Sbjct: 865 YVSSIYLRQLCDHANVRFHRMT-RNQLSLQLNENNDFEIIDYLNEGKSRSVKTLSGGQAF 923 Query: 958 LVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 VSL+LALAL++ V + D F+DEGFGT D+E+++ + L L + +G+IS Sbjct: 924 QVSLSLALALAESVQANAQADKNFFFIDEGFGTQDTESVNIVFETLTNLMKENRIVGIIS 983 Query: 1016 HVEAMKERIPVQIKVKKINGLGYS 1039 HVE +KE+IP + + K G Sbjct: 984 HVEELKEKIPTALNIIKDEERGSI 1007 >UniRef50_C7MLN2 ATPase involved in DNA repair n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLN2_CRYCD Length = 953 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 205/1061 (19%), Positives = 355/1061 (33%), Gaps = 128/1061 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LSL L IDF+ F +G+F I GPTG+GKTTL DA+ AL+ E Sbjct: 1 MRPLSLELCAFGPYADRVFIDFS--LFGESGVFLICGPTGSGKTTLFDAMKFALFGEASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR---VELA 117 + S T E E FE G+ YRA + +R++ G EL Sbjct: 59 TRRPTSSFASGFANATTEPFVEFIFEQAGKTYRARRVPHYSRSKKRGVGTTAAGGAAELV 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 G ++A K E L G+ +F++ ++++QG F+ L A K+RAE+ + Sbjct: 119 CETTGSVIASKANAMDEAVVDLLGITTEQFSQIVMIAQGDFSQLLTANTKQRAEIFRRIF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 TE Y I + E+ + L+ + L + T + Sbjct: 179 HTEPYQHIQERLVERKR-------TLEQHVEASEEQARIHLALLASENAPETTMPNDEVA 231 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 QQ+ +L + Q + ++++ A ++ + Sbjct: 232 GQQEVFLTLKGPIPSADKQGDPFAFERSVPSAGEQDNPFTFE------------------ 273 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 V +RL A+I H + L +QQ T LQE DR Sbjct: 274 ----------------GSVLSRLDDIEKELANIAAHDDMRKHSLTKQQAEAETRLQEIDR 317 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 + + ++ TS Q Q A + L+ D Sbjct: 318 NLGSARQTTQLEKRLAETTSYLVEHENAYQTAQANWQTAQAEEGLRHRLSEDIATATEKA 377 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 ++ + + Q + + T+ AL++ RQ+ +E + Sbjct: 378 RT------------LSEVSRLEGQHTTAQSKVAASQKAATETETALHQARQQLEEIAEAA 425 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 V Q R + E A Q + + Sbjct: 426 KRVHDAPAQLERARNDERLIAD------------------ALEQTALVDRMKQQTQTTTA 467 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E A R T + + + L Sbjct: 468 AFADAQERYAQARADTTQATNAFFAAQAGILARSLSTGTPCPVCGSKEHPHPAHLAADAP 527 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 Q ++D E+ R + + L A Sbjct: 528 TQAYIDTLQATEQTARTHLEEAG------------NKLAADKAAEDAQLKRATQALAALP 575 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 P E + R +EL A ++ +QLT L + + Sbjct: 576 PTYQSERIDTGKLATARTAIATRISELNAATDQQKQLTNEANRLSCMVPDLEEKARAASD 635 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 Q + + L +A A + ALQA D Sbjct: 636 TLIQAQRNEAEIAASINAL------------RATADYANALQAQKTID-----------D 672 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 ++LE ++ + + E +A+ ++ +A V ++++ Q Sbjct: 673 LRSRLEAAQKRFTVAQATWEEQRRAHDEHVARKKELEEQLAVAPHFNVATLEEQRILVVQ 732 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS-----KEG 892 + I + + + + Q ++ ++ YL L + Sbjct: 733 TRKNTVAEITTIESRQATNEKALVALKKIAQSSQRIEEEFSQISYLADLASGNAVGTQGK 792 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVEVVDTWQADA 944 F + Q + D+++ AN++L+ + GRY L R+ L+++V D + Sbjct: 793 ISFETYVQSVYFDSVLDAANERLSLMSEGRYTLLRRQQARDNRTQSGLDMDVFDAYTGKQ 852 Query: 945 VRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 RD +TLSGGESFL SL+LAL SD++ + ++D++F+DEGFG+LD+E L+ AL Sbjct: 853 -RDVKTLSGGESFLASLSLALGFSDVIQRQAGGIQLDTMFIDEGFGSLDTEALELALRVF 911 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 D L + +G+ISHVE +K+RI +I V+K ++ Sbjct: 912 DQLGRDKRLVGIISHVEELKDRIDHRIVVQKDQTGSTLTVK 952 >UniRef50_C4WAQ8 Exonuclease SbcC n=1 Tax=Staphylococcus warneri L37603 RepID=C4WAQ8_STAWA Length = 1009 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 191/1070 (17%), Positives = 397/1070 (37%), Gaps = 91/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L+L N E IDF N LF I+G TG+GKT + DAI ALY E Sbjct: 1 MKPMMLKLNNFGPFLNET-IDFRNID--QNQLFLISGKTGSGKTMIFDAIVYALYGEAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + EFE+ + ++ + + Sbjct: 58 KNRKENDLRSHFADGNSAMQVTFEFELNDKLFKIVRTGPFVKEGNTTKTPAKLNVFEYIE 117 Query: 121 DG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + + V + L G++ +F + +L QG+F FL + KE+ +L L + Sbjct: 118 NEFDLRESMVNAGNQFIIDLIGVNAEQFRQLFILPQGEFKKFLLSNSKEKQGILRTLFNS 177 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E + +I + E K+ + ++E+ + + L+ + + I Sbjct: 178 ERFEEIEKRLNENVKNEKIQIEERYKNIERLWNDIHTFENNDLEELKSINVHQTDKINEV 237 Query: 240 QQEQQSLNWL--TRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 ++ E ++ + ++Q L + ++ + L L + E Sbjct: 238 LHRFNEFGEKIGRKKYEQKKSHENEIEKVEQKLNDNKELESNLNELKKNENELKQLKQNE 297 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 A + +I+ ++ L A ++ + L + Sbjct: 298 SFINQHRAKLNKINEIKPLSQLLDRNEAANKKLKQAEKSIEIAVHSINNLLKEKEENQLG 357 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 Q + + + Q L ++K L++ + L Sbjct: 358 LNQLSEQEESINKEKDYLEKTNTFYNNLSQYLNSYKEK-ERLSSQLVNLNEKSELVEREL 416 Query: 418 HAEQRPLRQH------LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 ++ + L I +K + Q + ++N Q + + N+ LN+ + Y Sbjct: 417 LELNEAIKSKEINYSHVEQLSQDIFNIEKEIEQAE-KLKNDMQIKEELNSKLNDTKASYN 475 Query: 472 EKTQQLADVKTIC----EQEARIKTLEAQRAQLQA----GQPCPLCGSTSHPAVEAYQAL 523 +K ++ D+ + E + E QLQ G CP+CG+ + Sbjct: 476 QKCIEIDDLSNKLYEIDKTEINLNNKETLVEQLQQVVSLGDTCPICGNEITSLGQHIDFD 535 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + + +N QSL++D + Sbjct: 536 -----------------------------------SINKKQNLIQSLQEDLNKMNINKAK 560 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + +SLN + +++I ++ + E +S++ E + + N+ I++ +++E+++ Sbjct: 561 LESSLNHLTEQINNIYIDQNSIPDIENLYSKISRKKEEKEKQQKENEFILKTNKKVERKR 620 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 Q + ++ E + + + I + + L Sbjct: 621 QETFEIRNEVKNAESKIEQCEIRINDFESTTKH------------TEIDEFESYFKKLKS 668 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + +N ++ ++ + Q +Q + +++ Q + + Sbjct: 669 NVDHYLKSLEEHQQNRNEIVQKLSIEENNLQHHKQTKNEIQEDIKQTQQAIEAEMNRLNI 728 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D + + ++E + + Q + + + + E +A + Sbjct: 729 DSIEQVQDIVKIVNEKEEIENEIKEYDKQIHKYELEMNRLKELVAGKKL----------D 778 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 +E+IQ+ L+Q +L + QLK + + + ++ + + ++ +D L Sbjct: 779 NIEEIQKALSQLKVELEHLNHEIATLEYQLKLNQQKVDEIVSNIEYLNKELKEQQDIFNL 838 Query: 884 NSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEVE 935 ++ + K + L+ ++ AN +L + G RY LQR+ + LE++ Sbjct: 839 AEILSGRNSQKLTLENYVLIYYLEKIIAQANLRLATMSGQRYQLQRREALSQGFSGLEID 898 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D + ++ R +LSGGE+F SLALAL LS++V S + S+F+DEGFGTLD E Sbjct: 899 VFDFY-SNKARHISSLSGGETFQASLALALGLSEIVQQESGGISLQSMFIDEGFGTLDQE 957 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 TL+TALD L L ++G+ +G+ISHV +K+RIP+ ++V +K + Sbjct: 958 TLETALDTLVNLKSTGRMVGIISHVSELKQRIPLILEVTSNQYQSMTKFK 1007 >UniRef50_C6VPR9 Exonuclease SbcC n=3 Tax=Lactobacillus plantarum RepID=C6VPR9_LACPJ Length = 1061 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 216/1095 (19%), Positives = 394/1095 (35%), Gaps = 91/1095 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 MK + L + IDF++ S +F I+G TGAGK+T+ DA+ AL+ T Sbjct: 1 MKPVYLAMNYFGPH-EHSIIDFSK--LESTPIFLISGDTGAGKSTIFDAMTFALFGSTTN 57 Query: 60 --RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 ++ FE + Y+ S + + G+ + A Sbjct: 58 DGTDGRAAKEMRSQFAPADQPTSVTFYFEQGNQLYKIARSPEQYLAKKKGSGLTKKNSTA 117 Query: 118 RCA--------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 + A + + +A K D T+ L +F + +LL Q F+ FL +K ++ Sbjct: 118 KLAVVDHVGGVEIESIATKPADVGPEITTILNLTADQFKKIILLPQNDFSEFLKSKTTDK 177 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTE----LEKLQAQASGVTLLTPEQVQ------ 219 ++L+++ GT++Y +A + ++++A + L+ + T EQ Q Sbjct: 178 EKILKKIFGTQLYSDFTAELKAEYQTASKTGDQFVADLRVALASATWNDEEQAQLQAVPD 237 Query: 220 ----------------SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 + + Q + + A+ QQ+ + + D L Q + Q Sbjct: 238 NQKIPLLRAFVTTRQSAFDQAQQTTIKINRSVKAAETTYQQARDRQQQFDRLTQAQADYQ 297 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 +++ A+ QL AL+ AQP + + L +Q + + Q Sbjct: 298 TKVEEQTPAITIAKQQLHALTWAQPLQATMQALTQQTRDQKQLTLDQQAAMDNVQQAQDD 357 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 + QS Q Q L + ++ + A + Sbjct: 358 YRQAQAAVQQLHDQSEANHQHHQRLEQLATLIPQAQRVESLIAQLAKLKPSVADLKATFE 417 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 Q Q + K+ A + HA + L + + P + Sbjct: 418 QHQTVIKTLTAKITTQQANL--------PSIDDLHATKDLLIKQREQFVDTLTPLDSQWR 469 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 Q Q VT++ T A L Q Q + + + + + +L G Sbjct: 470 GAQQEQQRVTKQLTDLRAQLARDEQNQHNAQVQFEQQR----GQRQSLMIAQLQQELVDG 525 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 QPC +CGST H N++ L V A Q++A +++++ Sbjct: 526 QPCVVCGSTDH---SQMPVTTIVANEADLRQSMQAVDDAQNALAAANKQVEATQQRVEQA 582 Query: 564 ENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQG 623 E E Q Q + L T ++ D L+ + Sbjct: 583 EKEVDQATQQVTTAQTQLTSTYQQLIETNGL--ALKSPYDLTAVRAFFAEQLATITKKLE 640 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE 683 Q I +Y ++E +Q+ T + + L Q + Q Sbjct: 641 AAQRVVQAIDKYTAELEAQQKQAQQTELQLGEQQALLRNKTADLTVAQAAIGT--DLQVT 698 Query: 684 LTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 L L I+ T Q E + + L+ + +T Q Sbjct: 699 SADLLAEKAHLNQIVATYQQRLEAAQATVQTSQLTLSKHQTKLDDLNDRLKTTQATRTQL 758 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 Q++ +A A + + A LT L+ + + T + Q Sbjct: 759 EQTIAQALAAPEAPTHDQTVLENWLEELAN---GRLTALQVQIATYRQDKERLTTEIKQL 815 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 L ++ + IQ +LA SQ Q L ++ Sbjct: 816 QTALTNVER----------PNITGIQAQLADLQAHKDRALQSQTVAEQALTDAQSCLEKV 865 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGD----KFRKFAQGLTLDNLVHLANQQLTRL- 918 Q +M Q ++ + L +++ K+G+ K + L +++ AN L Sbjct: 866 QQIMHQQGTFAKRFAEITSLYNIMTGKDGNDHKLKLETYVVQNYLQRVLNYANDHFINLL 925 Query: 919 -HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDL 970 + RY + ++ L++ V D ++ R + TLSGGE+F+ +L++AL+LS++ Sbjct: 926 SNNRYTFELAAEASDNRSDHGLDINVYDNETGNS-RSSNTLSGGETFIAALSIALSLSEV 984 Query: 971 V---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQ 1027 V ++ +ID+LF+DEGFG+LD ETL+ A+ AL+ + + +GVISH+E+MK I Q Sbjct: 985 VQSSANGVQIDALFVDEGFGSLDDETLEKAMQALETI-GENRMVGVISHIESMKRTIGQQ 1043 Query: 1028 IKVKKINGLGYSKLE 1042 + +KK+ G G S + Sbjct: 1044 VLIKKM-GDGRSTVR 1057 >UniRef50_B9EBU9 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBU9_MACCJ Length = 1009 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 203/1065 (19%), Positives = 418/1065 (39%), Gaps = 91/1065 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L +++ K E IDF + ++ LF I+G TG+GKTT+ DA+ ALY Sbjct: 1 MRPIKLEIQHFGPFKNET-IDFKQG-LKNHTLFLISGKTGSGKTTIFDAMMYALYGTAST 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S ++ + D E + + +F +K + + + + + R+E+ Sbjct: 59 SSRNYKAMRNKHAYDEEETVIKFQFSIKDKQFLIIRNLPHIKA-GNKTPITSRLEVYEID 117 Query: 121 DGK---ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 D K I +K + +L + L +F + ++L QG+F FL + + + E+L L Sbjct: 118 DNKKRLISTNKKTETNQLIVDIVKLQADQFRQILILPQGEFKNFLVSDSESKNEILRTLF 177 Query: 178 GTEIYG----QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 T+ ++ V ++ + R + ++++ + + P + + ++ + + Sbjct: 178 DTKHLELMVKRLKENVDDKIDAIRMKEKEIEFHMQQLGVGFPPYMVTYDEQIRTVNLYYE 237 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL-SLAQPARNL 292 Q LN + + +L+ +A + + L + ++ + QLA L + N Sbjct: 238 ASQKVFSQNVSELNDRSNELKLKGDALKAAEILNNNIQSVKQHKHQLAILYEQREEIENT 297 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + +++ + + L+ I Q+EE+ + ++ +LQQ + +LN + Sbjct: 298 QKTVQQLVQFESYLSCI-SQLEELKKDNAHISVQKKDEEQQISENKDKLQQLKNTLNEVM 356 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 Q+ + ++ N+ ++ E +L + L+ + T + Sbjct: 357 QDDEEMKRLNHRLIELERFIDEKYQGLEEDVHTLNELKNETTALSDKLSSTHQVNE---- 412 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 + + L Q + + V Q R+ + I + E L +++ Sbjct: 413 ---SIQSSLEALIQEKTKAYEEKVDYQSRIRDNETIIS-LINEYDSYCKELEVIKENQDM 468 Query: 473 KTQQLADVKTICEQ------EARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 T++L +++ E+ + +++ RAQL+ GQ CP+C + Sbjct: 469 LTRELLSCESLIERFNFGDDLLDVDAVDSIRAQLKIGQNCPVCNHIVTEKTDGVHHEYHN 528 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 + Q R+ + + + K L ++ +D Q + Sbjct: 529 LIQRRMTLSREQEASTTKAEWIENLKKTTTDKLLAYEQFNIAYEHEDMQNTGELLIHEQE 588 Query: 587 SLNITLQPLDDIQPWLDAQDEH--ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 L L+ L++ +D Q E L+ I A+ ++II+ + E+ Sbjct: 589 MLTQKLETLNEHLNHIDHQYERLSNELKDNKISAISLKNAIDANEKKIIELNDEKERYHT 648 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + + + + A ++ ++ L L I + ++ + Sbjct: 649 FVS---------FTGFENYDEFKAQFDEKRNLYKDYDRHLNKLNEMIVSCSELIRSKENI 699 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 + + + Q+ + H + + + + ++A Sbjct: 700 VDKYNTHLIYNEKLLSQLEATKHSFHISDKIVDEYMD----------KDIEQEIEALQIT 749 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 + + E T+ LE L G Sbjct: 750 VESYYKDMHFHENTIKSLEDLI-------------------------------GGEQAPD 778 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +E++ E A+ K++E + + R QLK + Q + + + + + L Sbjct: 779 IERLTTEYAELSSKVKEFEQAINDERSQLKLMNNIIMQLEVVHSSYVKQMEDIGSEIKLF 838 Query: 885 SLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR------KASEALEVE 935 ++ K K + L+ ++ LAN++L ++ H RY L R + LE+E Sbjct: 839 EVLNGKNTLKLSIENYVLVYYLEQILLLANERLLQMTHNRYKLVRKKEVHSRKKSGLEIE 898 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDL---VSHKTRIDSLFLDEGFGTLDSE 992 V D + VRD TLSGGE+F+ SL+LAL LSD +S ++S+F+DEGFGTLDS+ Sbjct: 899 VFDYHTNN-VRDITTLSGGETFIASLSLALGLSDYVMQISGGINLESVFIDEGFGTLDSD 957 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 TL+TA++ L L +GK IG+ISHV++++E +P +KV+ Sbjct: 958 TLETAIEVLIELQQTGKLIGIISHVQSLQESMPAILKVESDGFNS 1002 >UniRef50_B8D1T5 Exodeoxyribonuclease I subunit C n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1T5_HALOH Length = 1108 Score = 344 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 194/1129 (17%), Positives = 414/1129 (36%), Gaps = 106/1129 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E I+F + GLF I GPTG+GK+++LDAI +ALY + R Sbjct: 1 MRPLLLKISGLNSFVQEEIINFKK--LTEKGLFGIFGPTGSGKSSILDAITIALYGKIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV--KGEAYRAFWSQNRARNQPDGNLQVPRVELAR 118 + + ++T E EF + + Y + N R+ + Sbjct: 59 D------TKEFINKETGELYVYFEFAMGSNQKTYCIDRKLKTSDNNG-YTTSRVRLAIKE 111 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + + +KV++ + + GL++ F R+++L QGQF+ FL + K+R ++LE + Sbjct: 112 NGKVEEVYEKVREVEDKVEKIIGLNHEDFMRTVVLPQGQFSEFLTLQGKKRRDMLERILN 171 Query: 179 TEIY-GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E + ++ + + ++L+ ++ + ++ + ++ + L+ L E Sbjct: 172 LEEFGERLMEKLRLRKNIKESQLKSVETILTSYEDVSEKSLEDILNKLENLKKEIGYKKK 231 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 Q+++ Q++ + Q+ L E+ + A+ A NL+ Sbjct: 232 RLQEKRNEYEKYKEVWTRQKQLLKYQEKLDTLEERSERISNLKNKMEQAKKALNLKKDIN 291 Query: 298 RIAEHSAALAHIRQQIEEVN-------TRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 R+ + Q++E + + K+ +L +++ + Sbjct: 292 RLERYHQERKETNQKVENLEKMIVDLREKRDRYNREYEESLRAKEKELPDLTKKKLEIKD 351 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 ++ +++ + E G + Q D+ L ++ ++ + + + + Sbjct: 352 AIKLYEQNKGIKKEVTGKAEKLKQMVQDKNSLEEYLKRGQEKSRVIKQQIKDLEDIIEKQ 411 Query: 411 -----------------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLA---- 443 + + L + + +L + + L Sbjct: 412 VINSDYRKTIMAGLNLERDYKQVQKDIKVINQGIKRLEREIWSLDEKRKDKSGELKRIES 471 Query: 444 ----QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 Q + I + + + + N ++ +K +QL D++ E + Sbjct: 472 GILYQYEKIIGDKEKAERELNGQKEKLEDDINKKRKQLEDLEKEIEDYKIRNLAGILAGK 531 Query: 500 LQAGQPCPLCGSTSHPAVEAY--------QALEPGVNQSRLLALENEVKKLGEEGATLRG 551 L G PCP+CGST HP V S+L LE + K + L Sbjct: 532 LTEGSPCPVCGSTEHPRVAEKIDKAGLQKLLNTRKEIDSKLTELEERLNKYNSGMSILNK 591 Query: 552 QLDAITKQLQRDENEAQ------------------SLRQDEQALTQQWQAVTASLNITLQ 593 +L + ++ + LR+ + + T L + Sbjct: 592 ELTRLRQEKEEVILSFDNVLSELEEYDGVLTTGPGELRRKRDRVKNELTKYTTQLETKQK 651 Query: 594 PLDDIQPWLDAQDEHERQLRL-------------LSQRHELQGQIAAHNQQIIQYQQQIE 640 L D + + L+ ++ E + + + Q+ Sbjct: 652 DLADRKDKMKELKSLNSTLKQEYFKLIGELGIDDIADELENINKKDKERENYQKRLTQLR 711 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 Q+ + + + Y ++ + + E + + Q + Q + + + L+ Sbjct: 712 QQYEKINNRIENYRVSFNETEREITIFEHKIQTLKDKYQENRKEIENKVGDRDPLHYLKE 771 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + +E + + + L+Q + + + + Sbjct: 772 VESREEELKKRVDKYKKALEDTTDLLNNKERLMERLKQNRATLIKEISDTEQYLKEKMDE 831 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 F+ L E + E+ E+ +++ ++ +T+ L Sbjct: 832 YKFESFDDVRKYLSWENQIRAWEEEITEFEDLKKEVESNITRLKMELNGQ--------SI 883 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 +I+ + + L G +Q +++ + ++ ++ ++ + Sbjct: 884 SQERWTKIKADRESLEENLSRLQEELGSCKQTIEELKRKLELKRKNQEKKEELEHDLAVI 943 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVEVVDT 939 +N LI G F +F L + A+ +L + RY L+ E + D Sbjct: 944 KDINDLI---RGKSFVEFVAMKQLRYIALEASSRLMEITNNRYKLELDNQG--EFVICDN 998 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTA 997 + RD +TLSGGE+FL SL+LAL+LS + + ++ FLDEGFGTLD LD Sbjct: 999 YNGGVRRDCKTLSGGETFLTSLSLALSLSSHIQLKGNSNMEFFFLDEGFGTLDVNLLDIV 1058 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKK-INGLGYSKLESTF 1045 +++L+ L+ T+G+ISHVE +K R+PV++ V+ GL S++ + Sbjct: 1059 MNSLERLHNEHLTVGIISHVEELKNRVPVKLMVEPAEPGLHGSRVRIEY 1107 >UniRef50_A3YYY9 Putative exonuclease SbcC n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYY9_9SYNE Length = 1002 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 198/1078 (18%), Positives = 350/1078 (32%), Gaps = 119/1078 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LR++ +I F + GLF I G TGAGKT LLDA+C ALY E Sbjct: 1 MKPHLLRIEAFGPYAEPVEIGFD--VLSQEGLFLIHGSTGAGKTFLLDALCFALYGEVSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 ++ A +EF G YR S + G + A Sbjct: 59 -DRSVKALKSDHAEPAAVPRVSLEFSSGGARYRVERSPAYTAPKTRGEGTTEKAPQAVLF 117 Query: 120 ----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A + +A + + L GLD +F + +LL QG+FA L A+ +ER LL+ Sbjct: 118 RLVSAGWEPIASRTTEVSREVQGLVGLDAAQFRQVILLPQGKFAEVLRARAEEREALLKT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----------------TPEQV 218 L T IY Q + + E+ K +R E+ + + E + Sbjct: 178 LFDTVIYEQAGSWLEERAKFSRIEVAEQNRSLEVMRQQAAHEWTPFAPEPVVAPNDQEGL 237 Query: 219 QSLTASLQVL----TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEE 274 + L + + KQ + + Q + + + + L + A++E Sbjct: 238 ERLVEQIAAVVAGTQSSLKQAVATLESAQTAKAAVEKLADRWDRRRAALTRLTELEAKQE 297 Query: 275 KAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA 334 LS A+ A LRP + AL+ + + LQS + R + Sbjct: 298 AVADFRQRLSRAERAEALRPSVDAEQAARVALSTLE---AGIKAELQSAIRARDTADALP 354 Query: 335 AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 S + E +Q + + + A+ Sbjct: 355 VSLVLLDLTALPSPEELGSARNDLAARRAELTALASQALEAGQAQARAAAAAARARAADL 414 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 +L++ ++ A A + R L L + + Q Sbjct: 415 RLSS-SSAARESRQQARQAAGAAFTKACSARDQLDGLQRAAQDAHDCARAVAAITPALHQ 473 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 E+ + R + L D + L PCP+CGS H Sbjct: 474 EKIAIATK-AKADGRLNQAQAALNDQRRR----QIAGMAARLAGGLVPEAPCPVCGSAHH 528 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 PA + + A E+E+ ++ + + A + D Sbjct: 529 PAPAQPSQDAIS--EEAITAAESELSAATTAAQQAAVAVEKAQGERKAVLERAGTAASDP 586 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 A + + +L + + HER+L LQ I + + ++ Sbjct: 587 VAADTAARQASQALTAAQALAETVASLEQEISNHERELEA------LQASIQSASTELAM 640 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 + T L + + + L + + + + A + +L Sbjct: 641 QARAATDETNRAQALSTAITRELGEGVDPKQALKSIEPLEAALKALAARCHASASASTRL 700 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 L + + + + +T++Q ++ + + Sbjct: 701 EQASSRLARDLAGSEFADGQAVVAALK-----------PETMRQLWAQRIKAFETEVIEL 749 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 L ++ D Sbjct: 750 RGLLASADLAD---------------------------------------------LPQE 764 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 D A V ++ E +Q EI++ + + + + +Q + Sbjct: 765 RPDTAAALEAVLAADAARTAAVERHSEARGAQTEIQRLTSEHSSGAGELASRREQAQLFS 824 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASE--- 930 + + +++ L ++ ANQ+L + GRY L+ Sbjct: 825 AVADRCSG-----RTAPFISLQRWVLSAYLGDICRYANQRLELMTSGRYQLRLTDEGGRG 879 Query: 931 ----ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 L + V+D + R+ +LSGGE+F SLALAL ++D V S +++LF+D Sbjct: 880 GRQAGLGLRVLDAYTG-EEREVSSLSGGETFQASLALALGVADTVEAHSGGVHLEALFVD 938 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 EGFGTLD + L A+D LD L A G+ +G+ISHV +KERI I+V + ++ Sbjct: 939 EGFGTLDPDNLQLAMDELDRLRAGGRMVGIISHVGGLKERIRYGIEVLSSDQGSRVQM 996 >UniRef50_D1BIQ7 ATPase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BIQ7_SANKS Length = 1047 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 198/1106 (17%), Positives = 382/1106 (34%), Gaps = 134/1106 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ S+ L+ + G +DF+ A++G+F + GPTGAGK+TL+DA+ ALY + Sbjct: 1 MQLHSMTLQAIGPFAGRHTVDFS--ALAASGIFLLEGPTGAGKSTLIDAVVFALYGKVAS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL---QVPRVELA 117 + D+ + ++ FE +R + R R + G Q V+L Sbjct: 59 AATSDDRLRSAYADDSTDSFVDLTFETAAGVFRVLRTPERQRAKKRGEGTTKQQASVKLW 118 Query: 118 RCAD---------------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 R G++ + ++ + GLD +F ++++L QG+FA+FL Sbjct: 119 RLPSDAVVAGAGLGEPGDVGELRSTRLDEVGLEIQRAVGLDRAQFVQTIVLPQGEFASFL 178 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQA--------------- 207 +KP++R LL+++ GTE+Y + A + K+A +L+ ++ Sbjct: 179 RSKPEDRKGLLQKVFGTELYDRAEAALVTMRKTADQQLKAARSAVQVSLETFLATSSLDP 238 Query: 208 -----------SGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQ 256 V L E LT + + L + + + +Q+++ + E+ Sbjct: 239 DDAEALRTAPPEHVGKLAAEHAHELTETARHLEVDATAVRQVHEARRQAVDTGRQTLEVA 298 Query: 257 QEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQ----Q 312 + QQ A ++ L A+ A + P + A + + Sbjct: 299 ARRDALRLEAQQLAASADEVAALGVRLDAARRASVVMPTLDAEAAARRGVGEASRTLGTA 358 Query: 313 IEEVNTRLQSTMALRASIRHHAAKQSAEL--QQQQQSLNTWLQEHDRFRQWNNEPAGWRA 370 ++ L +L +++SA + + + + A Sbjct: 359 LDAATGALGELPSLAGLALLDWSERSAAQPDEALTAAQDAAAADRSALEGRRAADAAQVV 418 Query: 371 QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT-ALAQHAEQRPLRQHLV 429 ++ + L +++ A L+ A+ A E + + Sbjct: 419 LLARVARLEDGLPARRERREQAVVALDEARTALEASAAEITERPAGRAALESQRDEARAL 478 Query: 430 ALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEAR 489 A I ++R A ++ R + + + + Sbjct: 479 AAQADIFRDRERRALATTETFARRDALARQLEEATAERTEAAALATRAVEHEREQRRRWI 538 Query: 490 IKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATL 549 A L G PC +CG+T HPA + V + + A E + + A Sbjct: 539 EGIAGELAADLVDGAPCAVCGATEHPAPAER--GDDHVGREVVEAAEAARQTAEKALAAA 596 Query: 550 RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHE 609 + + +++ + + A D+ E E Sbjct: 597 AETVTGLVERVAAQDTLLDGADPEAVAA-------------------DLVAARTGLREAE 637 Query: 610 RQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT 669 A + + ++ ++ L + +++E T Sbjct: 638 TAAASAVAAEGALSAYDAETARREAARTRLAEQVAADQARLEHDGTAIAADEKEVDLART 697 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 Q+ ++ V + V E+ + Sbjct: 698 EHQDV---------------------------------VGTDDDVTVAQVVTVLERRVEA 724 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 A +SL + + + AL+ D QA A +D + L +E Sbjct: 725 ARAVLHACDAVDAAVRSLAQREGERADALEQHDLDSPQAVRDAWLDRRELVAVEARVSEH 784 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 + + + + A + V +E ++ A+ + ++ + Sbjct: 785 RSAQDRVARGLDDPA---------VTALPDVVDVDLEALRTAAAEAEEAAQQVSARAVLA 835 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK-----FRKFAQGLTL 904 Q+ +Q + + + E + L D F Sbjct: 836 AQRAADMERGARQLADAVVALDTVRDTTESVIRMADLATGASSDNARSLTLTTFVLMRRF 895 Query: 905 DNLVHLANQQLTRLH-GRYLLQRKASE--------ALEVEVVDTWQADAVRDTRTLSGGE 955 +++V AN++L + GRY L R + L + V+D + RD RTLSGGE Sbjct: 896 EDVVAAANERLVTMSDGRYELLRSDDKEDVGTRKTGLAMRVLDHST-ETARDPRTLSGGE 954 Query: 956 SFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIG 1012 +F VSL LAL ++D+V + + +LF+DEGFG+LD ETLD L L L A G+ +G Sbjct: 955 TFYVSLCLALGMADVVTAEAGGIDLGTLFVDEGFGSLDPETLDAVLAVLGGLRAGGRVVG 1014 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGY 1038 V+SHVEA+K+ + I V+++ Sbjct: 1015 VVSHVEALKQTVADGISVRRLPDGSS 1040 >UniRef50_B5I7A6 Exonuclease n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7A6_9ACTO Length = 1002 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 196/1066 (18%), Positives = 347/1066 (32%), Gaps = 101/1066 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ +LRL+ G IDF +++GLF + G TGAGK+T+ AIC ALY + P Sbjct: 1 MRLHTLRLQAFGPFAGTHTIDFD--ALSADGLFLLHGDTGAGKSTIFAAICFALYGKPPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +E + G R + R + G + + R + Sbjct: 59 --DRDLLLRSHHAPAGLLTEVTLEVTLAGRRLRIDRIPAQMRPKRSGEGETSQKAETRLS 116 Query: 121 DGKILADKV----------KDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 + + AD ++ L G+ +F + +LL Q +F FL+A R Sbjct: 117 EWAVDADGQGRWEPSSKSHQEAAVEVTDLLGMSRDQFCQVVLLPQNEFTKFLHADAHGRR 176 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 ELL +L T + I + + ++ + +A + + + Sbjct: 177 ELLGKLFRTGRFSFIERWLNDHSRTTEKNRDAARADVLRLAERIHQAAGPDLTTEYTAPT 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-- 288 + + + + L + ++ L ++ + L Q Sbjct: 237 PDDPHTLTEPARAWAQDLLHVSHTDHARTLQAATTAKENLVRQQTFEAAARELHQQQTIY 296 Query: 289 --ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 AR + H L R Q A + H QS E ++ Sbjct: 297 ISARQQLDLLQEQTPHQDTLIQRRDQARRAQRAAPLLHAADTAADDHTRAQSVERTAREH 356 Query: 347 SLNTWLQEHD-RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 L R + A + + + + + +L + + A T Sbjct: 357 LLPEHKDLDASRLEAAEHRLRAEAAVLTALIPEEDTVHRLTAELKRTDAERQDFATQQRT 416 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA--AL 463 D + A+ R+ + Q L L+ ++ + T Sbjct: 417 A-QDWLEAEPARRGTLEARREAARQAEEESRRHQTALDGLKTRLEAAKRRDTHLAKVTKA 475 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 + + T Q ++ A L G PC +CGS +HPA A Q Sbjct: 476 EQQLADAEAVTGQTGQDYLTIRRQRTEGMAAELAATLTDGTPCLVCGSCTHPAPAAPQDG 535 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 +P R ++ + ++ L +Q Sbjct: 536 QPT-----------------------RQDEQDAEALHEQAKATQEAAAAVLHELREQAAT 572 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 T T D E L + + +Q ++ + + QQ Sbjct: 573 ATGEAGDTP-LTDLQTQHTTLTTELTDALDRAADQGTIQEELHTLDGEHTAQTQQHSTAT 631 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 L T Y Q E + L + + ++LT +R+++ +L Sbjct: 632 AGLSARNTHYDTLTQQLTELTAKLTAARATYPTVAAHADDLTRTADRLKETAEASRSLAT 691 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + + LAL Q + + + + + Sbjct: 692 AVQTLTHRTDQATQAAKDQGFDTLALAQQALLSDEDLRTIEEEITQWREA---------- 741 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 A A++D L Q + A+ A ALT Sbjct: 742 ---CAAHTAVLDNPALQQAAAQPSADLDAATAARAAADDQHAEAAAATNAAHTRSQALTA 798 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 + + + Q L + + + + + ++ + + + L Sbjct: 799 LTTDLGTAIQRL-QPLEQVHLTARHLAELVTGNSPSARVRMQLEA--------------- 842 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVE 935 + L+ +V AN +L + GRY L R A L +E Sbjct: 843 --------------YVLAARLEEVVTAANTRLHIMSEGRYTLSHSDHQAARGARSGLGLE 888 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 + D+W R T TLSGGESF SL+LAL L+D+V + +D+LF+DEGFGTLD + Sbjct: 889 ITDSWTG-RPRKTDTLSGGESFFASLSLALGLADVVTHEAGGNPLDTLFIDEGFGTLDED 947 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 TL LD LD+L A +T+GVISHV ++ RI ++ V+K Sbjct: 948 TLHKVLDVLDSLRAHDRTVGVISHVPELRRRITHRLHVRKSPAGST 993 >UniRef50_Q5HG72 Nuclease sbcCD subunit C n=54 Tax=Staphylococcus aureus RepID=SBCC_STAAC Length = 1009 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 174/1077 (16%), Positives = 377/1077 (35%), Gaps = 105/1077 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+L N + +IDF++ LF I+G TG+GKT + DA+ AL+ + Sbjct: 1 MKPLHLKLNNFGPFL-KEEIDFSKIDNNE--LFLISGKTGSGKTMIFDAMTYALFGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 EF++ Y+ + + + + ++ Sbjct: 58 EQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIK-EGNTTKTNAKFDVFEMV 116 Query: 121 DGKILADKVKDK--LELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK + K + L G++ +F + +L QG+F FL + +E+ +L L Sbjct: 117 DGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFLISNSREKQGILRTLFD 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPE--------QVQSLTASLQVLTD 230 +E + I ++ E+ K + ++E Q + ++ T + L + Sbjct: 177 SEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDDNIKGLLEVATQQIDKLIE 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQ-----------ALQQALAEEEKAQPQ 279 L ++ S+N + E ++ L + + + + Q Sbjct: 237 NIPLLQARSKEILASVNESKETAIKEFEIIEKKTLENNILKDNINQLNKNKIDFVQLKEQ 296 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI---RHHAAK 336 + + L + + I +I + T ++ + + K Sbjct: 297 QPEIEGIEAKLKLLQDITNLLNYIENREKIETKIANSKKDISKTNNKILNLDCDKRNIDK 356 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 + L++ + + + D+ R N+ ++ + R Q +L + L Sbjct: 357 EKKMLEENGDLIESKISFIDKTRVLFNDINKYQQSYLNIERLRTEGEQLGDELNDLIKGL 416 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + +D + + + + + L +L + Q + + Sbjct: 417 ETVEDSIGNNQSDYEKIIE--LNNTITNINNEINIIKENEKAKAELDKLLGSKQELENQI 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + + L + + KT + + + ++ + G CP+CG+ Sbjct: 475 NEETSILKNLEIKLDRYD------KTKLDLNDKESFISEIKSAVNIGDQCPICGNEIQDL 528 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 Q+ + + + AI + +E + + + Sbjct: 529 GHHIDFDSIAKRQNEIK--------------EIEANIHAIKSNIAVHNSEIKFVNEKISN 574 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + + + + + L +L++R + + + ++ Sbjct: 575 I-------------------------NIKTQSDFSLEVLNKRLLENENALNNQRDLNKFI 609 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 +Q+++ + L + L L + + E E ++ + N I Sbjct: 610 EQMKEEKDNLTLQIHNKQLRLNKNESELKLCRDLITEFETLSKY--------NNITNFEV 661 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 + Q + + Q+ ++ L + + Q L+ + + Sbjct: 662 DYKKYVQDVNQHQELSKEIEDKLMQLSQRKLIEQNNLNHYENQLETYNNDLELNEQSIEM 721 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 + D + +LEQ + + + + + + + + D Sbjct: 722 EMSRLNLTDDNDIDEIIAWRGEQEELEQKRDTYKKRYHEFEMEIARLESLTKDKELLDSD 781 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 +++ E K+ + Q + + + Q + + + Q + Sbjct: 782 ----------KLKDEYELKKGKMNTLIDEYSAVHYQCQNNINKTQSIVSHINYLNQELKD 831 Query: 877 VEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS---- 929 ++ L ++ K F LD ++ AN +L + RY L R+ + Sbjct: 832 QQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRYQLIRREAVSHG 891 Query: 930 -EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEG 985 LE++V D ++ R +LSGGE+F SLALAL LS++V S ++S+F+DEG Sbjct: 892 LSGLEIDVFDLH-SNKSRHISSLSGGETFQSSLALALGLSEIVQQQSGGISLESIFIDEG 950 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 FGTLD ETL+TALD L L ++G+ +G+ISHV +K RIP+ ++VK ++ + Sbjct: 951 FGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVKSDQYQSSTRFK 1007 >UniRef50_B0TDB8 Exonuclease sbcc, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDB8_HELMI Length = 1023 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 212/1078 (19%), Positives = 390/1078 (36%), Gaps = 91/1078 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L ++ G IDF LF I GPTGAGKTT+LDAI ALY +T Sbjct: 1 MKPLKLTMQAFGPFAGVQVIDFNE--LGGQSLFLIHGPTGAGKTTILDAITFALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVE----- 115 + E +F + GE YR + R + G Sbjct: 59 GEREGRQMRSHHASPKVETEVIFDFALGGEVYRIARKPEQERPRQRGEGMTTIAAAATLW 118 Query: 116 -------LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 A +G +LA + K E L GL +F + ++L QGQF L A KE Sbjct: 119 RRTGLPLDAESPEGAVLAHQPKRVNEEVLRLLGLRSAQFRQVVILPQGQFRQLLMAGSKE 178 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT--------LLTPEQVQS 220 R E+LE+L TE+Y I ++ K E+ L+ + + + E++ Sbjct: 179 REEILEKLFRTELYRLIEEAFKDRAKKLEEEVAALRQEQAFILVEAGLEKVDDLAERLDD 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + + Q +++L R E + +R + L Q L E++ + Sbjct: 239 HRRERDEKAQIVEAATASVQAAREALEQGRRDKEKLERWARLEAELDQLLKEQDGVMEKE 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 A L AQ A L RQ + + ++ + Sbjct: 299 ARLLRAQKAAGLADAESVRNSRRQEAERERQACARHEAEYGKALLRQKQAEERLVEEQSR 358 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + + ++ + + R +WQ+Q+ A++K + L Sbjct: 359 QKVRDEAQKRLT-----------VLEELAEKVATLAPLRRACEEWQRQVAEAQKKESRLQ 407 Query: 401 AITLTLTADEVATALAQHAEQRPLRQH--LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 L A + + + L Q + ++ A+L+ A Q + Sbjct: 408 MELAELQKQTDRLAKRRQTLLVEVGKAEFLETAAKQAIRASEKRAELEAARQRFRK-VEA 466 Query: 459 RNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE 518 RQ +E + R L+ G+ CP+CGST+HP Sbjct: 467 DYKRTESKRQACEENLAEARRRFDEMTDCWRKGQAAILAGALKTGEACPVCGSTAHPRPA 526 Query: 519 AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALT 578 A P + L E V+ +E L+ L + Q ++L+ + Sbjct: 527 TGGASVP--TEGDLKTAEALVRHRQKELEELQKTLADLAAQKAEVSTFGKALQAELGEKA 584 Query: 579 QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 A A+ +Q L + + + G++ + ++ + Sbjct: 585 ALSAADLAAEAKRMQALVEGARSAE------------QELATTMGELESLEKRKQAVTES 632 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 +E+ L ++ A ++R+ + R L + Sbjct: 633 LEKATVELRDCQL-----------------NAREAAAVLEEREKAIPPEVRRPDDLQRAI 675 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 + + + + +Q A + + ++ A +A F L Sbjct: 676 DDARFAWQALQKSWDAAQREAQLSAQQAAAAQAAYEAARRSSEDADGRFAAEEAAFVIRL 735 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + F D + + + + + LE+ + T A+ + Sbjct: 736 TEAGFQDIAEYERSKLTGEAIRSLEKEIREYGR----------SVERTRARRDEAEAAAR 785 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 + ++ L + + + ++ Q+ Q+ ++ + L + + Sbjct: 786 GIVAPDLDAFTAALETAESRRDDALKKEATLKDQIAQEERWLERYRQLEKYSKAREGRYR 845 Query: 879 DWGYLNSLIGS--KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS------ 929 G+L + EG F++F L +++ AN++L + GRYLL+R + Sbjct: 846 VLGHLARVANGRNAEGVTFQRFVLAAFLSDVLLAANERLKVMSRGRYLLERTSDRARANA 905 Query: 930 -EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEG 985 L++ V D + + R TLSGGESFL +L+LAL L+D+V + ++++F+DEG Sbjct: 906 AGGLDMVVFDHYTGQS-RPVATLSGGESFLAALSLALGLADVVQSYAGGIHLETIFVDEG 964 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 FG+LD E+LD A+ AL L G+ +G+ISHV ++ER+ +++++K + +K + Sbjct: 965 FGSLDPESLDLAVKALVDLQQEGRLVGIISHVAELRERVDARLELEKNDKGSSAKFKV 1022 >UniRef50_C2M1T2 Putative exonuclease SbcC n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M1T2_CAPGI Length = 1017 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 192/1050 (18%), Positives = 401/1050 (38%), Gaps = 50/1050 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L L ++ + S + + IDF++ GLF I G G+GK+++L+AI ALY ET R Sbjct: 1 MLPLYLTIEGIYSYQEKQHIDFSQ--LTDAGLFGIFGAVGSGKSSILEAITFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L+ + ++M + + EF + + R R + + R Sbjct: 59 LNKADKRGYNMMNLKSNRFYIDFEFLNFENKHIRVTRELKRNSKKFEDVRTPIVQFYERV 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 + I ++ L GL Y F R++++ QGQF FL K+R E+++E+ Sbjct: 119 GNQWIPLEQANP-----QKLIGLSYENFKRTIIIPQGQFKEFLELGAKDRTEMMKEIFNL 173 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + + +S + + + +L + + G + E +Q L+V D++K L T Sbjct: 174 QKF-DLSDNIAKLKRENNEQLSFKEGELKGYEEIHEEAIQIQQDKLKVEKDKQKSLETEF 232 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL-RPHWER 298 Q + L + ++++ ++++ ++ + + + E Sbjct: 233 DQLKTHYEHLRSLKSDFELLEQKRKEFAILYSQKKSFDELEKKVNTYEKIEKVFKNLLEN 292 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASI------RHHAAKQSAELQQQQQSLNTWL 352 + L + + +L+ +I A ++ +E +Q + L L Sbjct: 293 KTRLTKELQSYTYKKDTDTKKLKEVQEKLINISDNINYLQEAYEKLSETKQMEADLQQIL 352 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 + E + + + L+ + E ++ +L + + + Sbjct: 353 STFPLQEKLIEEKGRTIKGTEKIAAVEKELKDKKDYNNTIENEIESLKKQ--RIDSQLLL 410 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE-MRQRYK 471 + + L ++ +I +L ++ + + + + E + + Sbjct: 411 EVGNWYEKNHALSENKNKQQQKIQGTTAQLEEITHELSLFSLFKEGFVSDFKEKITIERE 470 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 ++ ++ Q + L +L G PCPLCGS+ HP + ++ + + Sbjct: 471 NIEKEKDILRQKLNQLELQRQLSHYTKELHEGSPCPLCGSSEHPNITHFEDV-----STE 525 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 L A + +K L + L+ L I K + + + + ++ +++ Q + A + Sbjct: 526 LAATQKAIKILDSQQEQLQQSLFQIEKTVDKKQFFEKQIQSEKEIALQIEKEQLAHHDKF 585 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + + ++ E L Q + +++I Q IE+ ++ L Sbjct: 586 IWSEFSKENRAVFDEKREFASALEQQIETKEALYKKGSKEIEDLQITIEKYKKGLENIFK 645 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 A ++ L E + + +Q Q +T + + Q+ E Sbjct: 646 EIATLEGHIASKKESLKVYNFE----DYKDKDFEFVQKTYQFVTKTNKYIEQTYTSLIEE 701 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 + + Q Q + +++ + +L+ AQ +L + Sbjct: 702 KNRLAPLQSQYEAQLKGTSELLEKWERELLSVEHTLESTLAQEHISL--------EEVTQ 753 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 L + + + Q+ + Q + +I+++ Sbjct: 754 ILSSPIAIEENRKKIQDFKIHYEVLQEQIQNLESKFVHVSFD--------PKAFAEIEKQ 805 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 Q+++ I +L++ ++ L++ + Q+ + E L ++ Sbjct: 806 YTLKGQEVKALHEQCIRIASELERITKALVHKKELLKSVTQLRTRNEHIKLLENIF---R 862 Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 G F ++ + L L AN + R+ R LQ + E E EV+D R +TL Sbjct: 863 GQGFVQYISSIYLQQLCQHANVRFQRMT-RGQLQLQLGENNEFEVIDFLNEGKSRSVKTL 921 Query: 952 SGGESFLVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGK 1009 SGG++F VSL+LALAL++ V K + D F+DEGFGT DSE ++ + + L + Sbjct: 922 SGGQAFQVSLSLALALAESVQSKAKADKNFFFIDEGFGTQDSEAINIVFETITGLLKDNR 981 Query: 1010 TIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 +G+ISHVE +KERIP+ + + K N G Sbjct: 982 IVGIISHVEELKERIPLSLTITKDNERGSI 1011 >UniRef50_A7V414 Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7V414_BACUN Length = 1140 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 243/1142 (21%), Positives = 445/1142 (38%), Gaps = 105/1142 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L +KNL S++ IDF P + LF I G TGAGKTT+LDAICLALY+ETPR Sbjct: 1 MKLQKLTIKNLASIEDA-VIDFENGPLSEESLFLICGETGAGKTTILDAICLALYNETPR 59 Query: 61 LSNVSQ--------------------SQNDLMTRDTAECLAEVEFEVKGEA-YRAFWSQN 99 + + LM R+T+E E+EF E Y A W Sbjct: 60 MDHAENEKYKDLSQTFSAKKEDVAINDSRQLMRRNTSEAWTELEFTGSNETPYTARWYVA 119 Query: 100 RARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 RA + G +Q R L G L +K + GL + +F R+ +L+QG F Sbjct: 120 RAHRKISGAVQDVRWTLENKKSGAQL-NKKNEIKAEIQAAVGLTFEQFCRTTMLAQGDFT 178 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 FL +K E++++LE+LTGT IY +I A ++ K RTE E + G+ +L E+V Sbjct: 179 KFLQSKESEKSDILEKLTGTSIYSEIGAEIYAATKERRTEYENQNRKLEGIHILAEEEVS 238 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ ++ K+ + +WL + EL ++++ + A+ + + + Sbjct: 239 TIKEAIATQNAGVKEANEQKTTALAKRDWLKKYSELLLTREQQKKMWEGKQAQLQSDEFK 298 Query: 280 LAALSLAQ--------------------------PARNLRPHWERIAEHSAALAHIRQQI 313 L + + A LR + R+ S L ++ Sbjct: 299 QKELLIKEWNATADARNWLSTLKQQQQQQQQNYAQAGILRASFARLDGGSKWLCGFLKEQ 358 Query: 314 EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFS 373 E+ R + + + + + + + + +L+ + A + Sbjct: 359 EDKLHRAEKYLQEHSPLLPMFEQSQSIITGLKSALDAQTRIGTYNAHLERLAAQQPVKVK 418 Query: 374 QQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHG 433 ++T L + +Q+ + ++N T+ + + R ++ Sbjct: 419 ERTDKEAALTRKEQENHTLQNEINLRNKQLETMDRPALQDKKNKLDAGRENLLQALSALS 478 Query: 434 QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTIC--EQEARIK 491 + ++ L + + + + + ++ + K D++T+ ++EA + Sbjct: 479 LLAETERTLNEAKENEKALNAKVEACQKQYVLLQTAFDSKKTSYDDIRTLYDKQKEAVEE 538 Query: 492 TLEAQRAQLQAGQPCPLCGSTSH-----PAVEAYQALEPGVNQSRLLALENEVKKLGEEG 546 + R++L G CP+CG ++ A +++ + + L Sbjct: 539 WAKETRSRLVVGDTCPVCGQEIKSLCKDEDFQSVLAPIRTSLETKEKEYKETEQALNNNR 598 Query: 547 ATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQD 606 Q +S + T + + + Sbjct: 599 TESNTYGTLAENARQSTARALRSYNLAHTDAQAKCAQCNGVGLSTTTGETLKKLLEENKL 658 Query: 607 EHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESW 666 E ++ L++ +L QI A +Q + Q+ ++ +Q + ES Sbjct: 659 EADKLNEKLTEVQKLSAQIIALQRQKDECQKHVDAARQAFNSADRVLNELKNSIVNYESL 718 Query: 667 -----------------------------------LATRQQEAQSWQQRQNELTALQNRI 691 + Q ++++ Q + L++ I Sbjct: 719 TANEKENIRATMDRVTPHILWEGWNTEWENSPLSFIDRLTQATRNYRLAQEKQRELKSAI 778 Query: 692 QQLTPILETLPQSDELPHCE--------ETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 + LE + + E + + L++Q L+Q Sbjct: 779 ALIHKELEGININKESIDAAFPDWRNAPAATQEMEIKDLGIAWNNLNTQASGLKQSISST 838 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAF-LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 A+ + + Q A+ D++ + + + L Q L+ + A T Sbjct: 839 AEQMARLQKDLTGFYAANPTLDEERITVLSAWSGSRIEALRASLQTLKEEEVAASTAFHL 898 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 + +H +P+ +E + +A +K+ S G+ + +L+++ N + Sbjct: 899 ATGQVEEHISRKPEI--EENENLETLDALIANLEEKITVGNQSIGQQKLRLEENTRNIDR 956 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 + ++ ++ ++ W L G + G FR AQ L L+ AN L RL RY Sbjct: 957 IKEEKERADRLREEYLKWDRLCRHFGDERGKNFRNIAQSFVLKELLAGANFYLQRLTDRY 1016 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 L+ +A L + + D Q A R TLSGGESFLVSL+LAL LS L +D+LF+ Sbjct: 1017 ELECQAGS-LTILLRDFHQGGAARPACTLSGGESFLVSLSLALGLSSLSRQSLSVDTLFI 1075 Query: 983 DEGFGTLDSETLDTALDALDALNA-SGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 DEGFGTL S+ L+T +D L+ L+ GK +G+ISHVE +KERI QI+V++I S++ Sbjct: 1076 DEGFGTLSSDYLNTVMDTLEKLHQMGGKKVGIISHVEGLKERIKTQIQVRRI-DSSRSEI 1134 Query: 1042 ES 1043 + Sbjct: 1135 KV 1136 >UniRef50_A6P234 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6P234_9BACE Length = 1098 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 199/1102 (18%), Positives = 379/1102 (34%), Gaps = 75/1102 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + G ID + GL+ ITG TGAGKTT+ DAI ALY E Sbjct: 1 MRPLKLTVSAFGPYAGRVTIDLEK--LGPKGLYLITGDTGAGKTTIFDAITYALYGEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + E+ F G+ Y + R G + A Sbjct: 59 DNREVSMFRSKYAQPDTPTEVELVFSYGGKTYTVRRNPEYERPAKRGEGTTTQKADAELT 118 Query: 121 -DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 L + ++ + GL+ +F++ +++QG F L A K R E+ E+ T Sbjct: 119 LPDGRLITRAREVNRALIEIIGLNRSQFSQIAMIAQGDFLKLLLADTKSRQEIFREIFKT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQ--------------------------------- 206 Y + + + + + E +A Sbjct: 179 RYYMVFQEKLKGEAGNLQRDCEAARASVQQYIGGVVCREDEPLRARLEKAQAGELPFQET 238 Query: 207 ---ASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 + E+ L L E K+ + +++ + + ++E + Sbjct: 239 TELIRQLIANGREEEGDWQKVLDRLDAELKETSILLGKAEEAQKNREKLELARRERAELV 298 Query: 264 QALQQALAEEEKAQPQLAALSLAQPA----RNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 ++ A + + L P ++ +++ A LA + I + + Sbjct: 299 PQVEAAQKALQAEMEKAPRQELLNQELGALEAELPRYQELSQREAGLAAQTEHIAALERK 358 Query: 320 LQSTMALRA---SIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT 376 + + +++ L + L + ++ + Q Q Sbjct: 359 CREQEEAQRAGAEALDAWKREAEALAPVEAEKERLLGKKNQAESRKSALEVLETQVGQWK 418 Query: 377 SDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATAL--AQHAEQRPLRQHLVALHGQ 434 + + + Q++ +++ LAA L A RQ + + Sbjct: 419 ACLRQISEGQRRREELDRQRETLAADLLRKKEQLQANRETFQATQSLTEERQEQLHRQER 478 Query: 435 IVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLE 494 + +Q L L A+ E+ A+ E+ ++ +E+++QL + + + Sbjct: 479 LRERQLALTTLASALDGYAVEEKSLQAS-QEVYRQARERSEQLEEDYRRKNRAFLDEQAG 537 Query: 495 AQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLD 554 L GQPCP+CGS HPA + E + + +L Sbjct: 538 LLAQSLTEGQPCPVCGSLHHPAPARLSGNASTEAELEASKEAWEAAQRETQEKSL----- 592 Query: 555 AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL 614 A E L ++ A TA +++ D + Sbjct: 593 AAGTARAALEERRNQLLRELAAYVDTPALDTARQQLSVCQSDVERELAQVHGALLELEGR 652 Query: 615 LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL---ATRQ 671 L+ R +L+ +I + + ++ Q Q + Q ++ E+ L + Sbjct: 653 LAHRQKLEQEIGRQEEVLEDLTKRQGQLQAAITQAEVAQGALGGQREQLEAALCRELAQH 712 Query: 672 QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHS 731 E + + + + + L + + + + ++ AL Sbjct: 713 LEPCTLEDAPKAIAGALEQTRNALSQLAEQERILQKSSQRKAELDRQIPVAEQKLRALEE 772 Query: 732 QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLEN 791 L+ + A ++ Q + + F + A A + +L+ L L Sbjct: 773 DAGRLKAELAGAVSRREEMAGQVQSLREGLSFPEPDA--AQRRMDALREELQGLAMALAK 830 Query: 792 QRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ 851 R A + Q+ V + Q ++ E + +Q I Sbjct: 831 ARETAAARQGELTAADGAIQELEHLLERTQEVDAQAQQLRSQALTRQRAEASEAQKAIHT 890 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDNL 907 +L + + + ++ Q+ L++ + KE + Q D + Sbjct: 891 RLVTNETALENILGKSADLEKLEQKYTWMRTLSNTVNGNLAGKEKIALETYIQMTFFDRI 950 Query: 908 VHLANQQLTRLH-GRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 + AN +L + G+Y L+R ++ LE++V+D + R ++LSGGESF Sbjct: 951 LQRANLRLMVMSGGQYELKRRREAENNRSQSGLELDVIDHYNGSE-RSVKSLSGGESFKA 1009 Query: 960 SLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 SL+LAL LSD V + R+D++F+DEGFG+LD E+L AL AL L + +G+ISH Sbjct: 1010 SLSLALGLSDEVQSAAGGIRLDTMFVDEGFGSLDEESLAQALQALTGLTEGNRLVGIISH 1069 Query: 1017 VEAMKERIPVQIKVKKINGLGY 1038 V +KE+I Q+ V K G Sbjct: 1070 VAELKEKIDKQVVVTKEKSGGS 1091 >UniRef50_C2BHK1 Exonuclease sbcC n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK1_9FIRM Length = 1012 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 190/1070 (17%), Positives = 407/1070 (38%), Gaps = 95/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ ++L+ + K E IDFTR +F I+GPTG+GKTT+ DAI ALY E PR Sbjct: 1 MKVRKVKLRGFLTYKDEVTIDFTR--LFDKKIFLISGPTGSGKTTIFDAISFALYGEVPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQ-NRARNQPDGNLQVPRVELARC 119 + ++D ++ D ++EF + Y+ RA + RVEL Sbjct: 59 EIAMEDLRSDYLSEDDDFTYVDLEFSLADRVYKIVRIPSQRAVELKNPKNIGHRVELYDI 118 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + ++ADK+K+ E L GLD +F++ MLL+QGQF FL +K E+A LL ++ Sbjct: 119 TGEKTLIADKIKEVDERIKDLVGLDKNQFSKVMLLAQGQFQKFLISKSDEKAALLSDIFK 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T+ I + ++ + L ++ + V ++ L + D E Sbjct: 179 TDALRAIQDELKKRANENKKMLAQVDKDLANVLSDNELLQGKISEDLILRRDFENIFQII 238 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPHWE 297 Q E +L + + + ++ L L + + + ++ + L ++ Sbjct: 239 AQTEADQEGFLKEILKSLDKLKKNEKNLISDLEKAKTLNENIVKYKKSEETYQALLVDFD 298 Query: 298 RIAEHSAALAHI--RQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 + + L + I+ RL+ T A + L ++ Q+L +E Sbjct: 299 KNTDLKRDLDLLFYALSIKIYEDRLEKTKADLGDFEENKLGIEKNLAKKNQALVEVEKEV 358 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLR------QWQQQLTHAEQKLNALAAITLTLTAD 409 ++ N+ + S++ + L + + + ++ L L + Sbjct: 359 EKLPSLKNKLDQAKISHSKKVKEIADLEEFLRVKKSYEAIKDLDKDLERLQTEIKNDERN 418 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN--AALNEMR 467 + + L + ++++++++ ++N+ ++ + E Sbjct: 419 LDELR----NLYDIISKDLARAKEEDFANKEKISEIKTRLENLAKDYQKIKENKTYEEKL 474 Query: 468 QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 + ++ ++K +++ + +L A CP+CG Sbjct: 475 ASLAKDLEKTENLKNKADEDRENLEINKLIDRLNAEGLCPVCGKAH-------------- 520 Query: 528 NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS 587 ++L + + + + Q+ + + A Sbjct: 521 --------------------------QGEREKLAVSDLDLEKISQELADIRIDLEKTKAI 554 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 L+ L + + LL +L G+ + + + +I ++ L Sbjct: 555 YERNLKDLGTAYKLGEIEKIIADNKDLLKSYQDLGGKTKEKIKTLTEKANEIGKKGVDLK 614 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + + LA + + E T + +L ++L + Sbjct: 615 KAREKKEKACEEISAKLKNLADLK-----IKYLSGEKTMAGLDMAKLLGEKKSLEEEISS 669 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 + + + + L + A + L+ Q F+ L+ F++ + Sbjct: 670 TTTFIKDKEKAHQDLVLAISKQKASLAALIENIAKANEDLKTYQKDFEDKLKEK-FENLE 728 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 A++A L E L + L + + +T +++ + + Sbjct: 729 AYMAYLSREGELKAQKDLVETYFTDLAREKTT-----------KENFSFFKDKAPEDLFK 777 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 + +L + ++++ + ++ L + + + + +++ + L+ L Sbjct: 778 FEDDLKEVTREIKVLDDDKIKLSTILNSIKKDEGKIKKIHASYLSLSKTAQIVSNLSDLA 837 Query: 888 GSKEG-------DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEAL 932 + G F F + D +++ AN + ++ G++ + R ++ L Sbjct: 838 NGQTGGVKGLERLDFETFILSVYFDRVLNFANLRFNQMTDGQFSMVRKTEAVDARSKMGL 897 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTL 989 +++++D+ R TLSGGE+FL SL+LAL LSD + + RID+LF+DEGFGTL Sbjct: 898 DIDILDSNTGKK-RPASTLSGGENFLASLSLALGLSDEIGAENGGIRIDTLFIDEGFGTL 956 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 E L A++ ++ L+ + +G+ISHV+ +K+ I +I + G S Sbjct: 957 SKEFLANAIETIEKLSKENRFVGLISHVDELKDAIEAKILITYDPSQGSS 1006 >UniRef50_Q4L655 Nuclease sbcCD subunit C n=4 Tax=Staphylococcus RepID=SBCC_STAHJ Length = 1011 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 183/1080 (16%), Positives = 420/1080 (38%), Gaps = 109/1080 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L N E IDF + LF I+G TG+GKT L D I AL+ + Sbjct: 1 MRPTKLILNNFGPFIHE-VIDFEQIN--KEQLFLISGKTGSGKTMLFDGIVYALFGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + E EF++ + ++ + + + +L ++++ Sbjct: 58 EGRNEGELRSHFADGKSPMSVEYEFKINDKKFKISRQAGFIK-EGNTSLTPGKLDVFEFD 116 Query: 121 DG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + ++ K+ L G++ +F + +L QG+F FL + ++ +L L Sbjct: 117 EESQLYELRESKISSGNGFIKDLLGINAEQFRQLFILPQGEFKKFLVSNSSDKQSILRTL 176 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-------------------EQ 217 + + ++ ++ Q K + ++E ++ + + Sbjct: 177 FNSIRFEEMQNLLLNQVKDEKKQIESRYSRIQILWEDIETFENDELIQFKSLNSMQTKDI 236 Query: 218 VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ 277 ++++ V ++ + + +L + R+ E + + L + ++ + + Sbjct: 237 IKAIPQFELVGQHLNEEYEQLKSEHNDALEAIKRKIEENNKLIESLKELDRNKDKKVQLE 296 Query: 278 PQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ 337 ++ + + +++ Q+ E +L S + + K Sbjct: 297 KNKDSIEKLKAELRKIIEIKPLSQLYNQRNTKEQKYENTKVKLNSILEELNELNDKLEKF 356 Query: 338 SAE---LQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 E L +Q + +N + D+ +Q+ + +R F++ + +L++ Q+ + Sbjct: 357 KKEKEILNEQLEDINIKSEYIDKTKQFYSNINKYREAFNEIKQNETYLKENNQKQEENKN 416 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 ++ L + + + + Q + L ++ L + + Q+++Q Sbjct: 417 LIDKLNNDIAKIDVN--------NENIDEITQEIFQLTNTF-DKKVTLRENKKKYQSLSQ 467 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADV-KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 + + ++ + +++ + QL ++ K+ + + ++ + L G CP+CG+ Sbjct: 468 KYNETENSIKKTKEQISDLKLQLENIDKSNIDLNDKQTFIQEIQNALHVGDTCPICGNEI 527 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 E + E NQ+ + + N++ K E L D I+ Q+ E + Sbjct: 528 ESLNEHIKFDEIAKNQNLIKEVNNQLNKKINELTKLETTSDYISNQMSELEINDDEICDI 587 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + Q E E+ + QR +L+ + H Sbjct: 588 NEI---------------------EQQLRTKNKEKEKLQIQIKQREKLKSALDKHK---- 622 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 + ++ + + LL+ + + + ++ T + E Q ++Q + +T ++ + Sbjct: 623 DIKHSLQIKHEKLLSLKHQFETLINEFKSYTNYDETNKFE-QCFKQYEQIVTDYVSKSEV 681 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + Q E+ +++ ++ + Sbjct: 682 LEKEINQTKQQIEIETNNLNNNKLAIKELEQEISGHSDEI-------------------- 721 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + ++ + + L + Q+E Q E+ ++ + + ++ Sbjct: 722 -NQEMKRIGLNSYKDVEILLSKLENKEQIEMKIQQYEHDHQKLTLEIERLSKLTK----- 775 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + +VE+++ + + + I+ Q++++ D + + + Sbjct: 776 -----DNKSESVEKLEATKTEIESNYNKYVEASATIQYQVQKNKDKFNSIMDHINYLEKE 830 Query: 874 TQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS- 929 ++ ++ L+ ++ K K + L+ ++H AN +L R+ G RY L+R+ S Sbjct: 831 LKEQQEIFELSEVLSGKNSKKLTLENYVLIYYLERIIHQANIRLERMSGERYQLKRRESI 890 Query: 930 ----EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFL 982 LE+EV D ++ R +LSGGE+F SLALAL LS++V S ++S+F+ Sbjct: 891 SHGYSGLEIEVFDFH-SNKSRHISSLSGGETFQASLALALGLSEVVQQESGGITLESMFI 949 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 DEGFGTLD ETL+TALD L L SG+ +G+ISHV +K+RIP+ ++V +++ + Sbjct: 950 DEGFGTLDQETLETALDTLVKLKTSGRMVGIISHVSELKQRIPLILEVTSNQYQSHTRFK 1009 >UniRef50_Q0S485 ATP-dependent dsDNA exonuclease SbcC n=4 Tax=Rhodococcus RepID=Q0S485_RHOSR Length = 993 Score = 338 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 203/1078 (18%), Positives = 368/1078 (34%), Gaps = 123/1078 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L ++ G ++DF R ++GLF + G TGAGKTT+LDA+ ALY P Sbjct: 1 MRLHRLEVEAFGPFAGSVEVDFDR--LGADGLFLLHGHTGAGKTTILDAVAFALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ---VPRVELA 117 + + +E + G R S R + G+ + L Sbjct: 59 ARKDGKRLLSDHAPAGSVPTVTLEATIAGRHLRLVRSPEFERPKRRGSGTIKENAKATLT 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ D + L G+ +F + +LL QG+FA FL A +ER +LLE L Sbjct: 119 WLDGRGENLSRIPDIADEVGRLMGMSADQFFQVVLLPQGEFAKFLRADNEERGQLLERLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ------------------VQ 219 T +G + ++ +++ +L++ Q + Sbjct: 179 DTTRFGTVEEWFLDRRRTSAHDLDEHQRAVDVLLARVATAAGIEGGADADPVTWAHKLEA 238 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 + + D+ + + + + +L R ELQ R + L+ A ++ Sbjct: 239 EARETRDLAADDLQTAKSQAKVTRDALTEARRVLELQNRRRRAEAELEAHAAGADRRAVL 298 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 +A L+ A+ A + A A + +E + L+ST+ + + +A Sbjct: 299 VAELADARRAEPVATVARDADAARAKAAAAARNVEAITDGLRSTVGGADLVSELSWPPTA 358 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 + ++ +S D + + A A + + + LR Q +L A L+ Sbjct: 359 DEREHIRS--RIRAWRDEIVRLDGALAESLAA-DRLAVEVDRLRTRQVELAEAGDALSR- 414 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 L L E AL + R LV + A L+ E+ + Sbjct: 415 EREQLPLALREAEKALDSAQKARAAVPGLVDARDRAADAASAAADLRTRR----AERDRL 470 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + + R+++++ + D+ Q L+ G PC +CGS+ HP Sbjct: 471 ERGVLDARRQHQDAREHWLDL----LQRRIAGMAAELAGTLEDGVPCQVCGSSEHPQPAE 526 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 L K + T++L E L Q Sbjct: 527 PSELSVTKTDE---------DKALAAEQKAAAAMTTATEKLGAVERAIGVLVQ------- 570 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 + Q A+ L + + + Q++ Sbjct: 571 --------RGGDGDADELAQALTAAETAVGEATALGDEVERRSASLTELRDRESHLQERS 622 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 T + Q E + ++ + S + R+ L AL +L Sbjct: 623 RDLGVDAATVAERITASTTQLGEIRARVSEAAGDDPSVEARRARLDALAESASELLDA-R 681 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 E E E Sbjct: 682 DAGAGAESAARELAAKAETLA--------------------------------------G 703 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 + FD +AA+ ++E + + A++++ Sbjct: 704 DAGFDSTADAVAAVRTAARQGEIEAVLTAARDAEVGARSVLDDPE---------VVAVAE 754 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 A V + +Q + + + + ++L Q + IA M E+ Sbjct: 755 ADPVELASVQHAHDVAAEVVNVAVAAASDAERRLLDLERFVGQLDKAAEAIAPMQAAHEE 814 Query: 880 WGYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS----- 929 L +I R + L+ + A+ +L R+ GRY Sbjct: 815 LAALAEVIAGRGQNARKMSLRSYVLAARLEEVAVSASARLGRMSAGRYEFVHSDEAGPRG 874 Query: 930 --EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 L +++ D + VR +TLSGGESFL SL+LAL L+D+V S +D++F+DE Sbjct: 875 RRGGLGLDIRDDYTG-VVRSAKTLSGGESFLASLSLALGLADVVAAESGGVVLDTMFIDE 933 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 GFGTLD++TLD+ + LD L G+ +G++SHV+ M++RIP ++ V + ++ Sbjct: 934 GFGTLDADTLDSVMGVLDELRDGGRVVGIVSHVDEMRQRIPSRLHVIRGRTGSTVEVV 991 >UniRef50_B1HUN1 Nuclease sbcCD subunit C n=2 Tax=Bacillaceae RepID=B1HUN1_LYSSC Length = 1026 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 206/1074 (19%), Positives = 397/1074 (36%), Gaps = 91/1074 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + K IDF + + LFAI+G TGAGKTT+ DAIC ALY Sbjct: 1 MKPLKLTITAFGPYKNTEIIDFQQ--LGEHRLFAISGKTGAGKTTIFDAICYALYGAGSG 58 Query: 61 LSN-VSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + D E+ FE+ G Y+ + + + +VELA Sbjct: 59 EDRQDTALLRSGFADDDVYTAVELIFEMHGRVYQILRQPGHIKGK-NKTATGKKVELAEV 117 Query: 120 ADGKILAD-----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 +G + + + + + + GL +F++ ++L QG+F L + + +L Sbjct: 118 REGMLDYNIVEKQQTLEVDKKIQEIIGLTKDQFSQIVMLPQGEFRKLLTSDSTNKEVILR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVT---------------LLTPEQVQ 219 ++ T+ +G ++ ++ + K A ++LE+ + + + + Sbjct: 178 KIFKTDRFGAMTKLLDAKRKEAESDLERAKQLKEHLLGQIVGALPQRSSPLFKQIADNTE 237 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ Q L +E + Q+ + +QE R + L + E+ K Q + Sbjct: 238 NMFQLKQALEEELTYYKKCFEDIQRQYEEAYNHHQKEQEFYRLAKTLNEQFEEQSKRQER 297 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 L L Q + + +AE + L + QQ ++ Q+ + Q+ Sbjct: 298 LQMLLDEQDKYHAKEREIALAEQAERLLLLEQQCMDLRAE-QNLKEQAYQQAQSSQLQTK 356 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 EL Q+ Q + + RQ + + + Q Q + Sbjct: 357 ELLQRAQEKYEAEEAKESERQLLLQQEMQLQALLPKFEAYDSHVQQLQIAEQYVKTAKQG 416 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ--LQVAIQNVTQEQT 457 AA + L E A + + G + K Q L + ++N T+ Sbjct: 417 AADNIVLIEKESAQLEQLSQSIEHYEKQMEPYEGYLEKLPKLQEQVTLLMQMENYTKTVE 476 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + + RY++ +L + EQ QL+ GQPCP+CGST+H Sbjct: 477 IAKQDVIATKARYQDSRLELQQL----EQRWLTSQASVLAQQLKEGQPCPVCGSTAHQQT 532 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + + + TLR ++ + + E +S +Q +Q Sbjct: 533 HNEKLEIVEL----------------AQVETLRVKVSSDERLYLEKEAMLRSAQQLQQET 576 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 +Q A + Q + ++ + L+Q + Q + +Q+ Q Sbjct: 577 LKQLDAHSIKQQDQAQIIASLEKMEKEITSLRVINQQLAQTRKNQKEQRLTIEQLQNKQL 636 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 ++E+ + + + +++ ++ + QL Sbjct: 637 KLEEY--------------------LSEQMKSWTRLQAIVEEQHKQMPTNIPTLPQLKQT 676 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 L + Q + + E + +Q + + QF T+ Sbjct: 677 LTDVSQQKMDFQKLWQESQHHLHAMKEADSNAKLAVEIAKQNFEELKLKMNDKREQFSTS 736 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 +Q + F + + AA L +L + + Q + +++ + L ++ Sbjct: 737 MQEAGFVSYEDYAAAKRSATQLEELRRACSDYTLQVHTLKIQISEGEKHLQGKEEQ---- 792 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + ++ + + +I +K + + +++ + + Sbjct: 793 ------DLALMEATVKSLRIAYEDAFKQLQQIDGFVKSCQSFMNKVEETERELRLLESEA 846 Query: 878 EDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA------ 928 L L+ + K F ++ Q LD + AN +L L G++ L+R Sbjct: 847 GRVKELYGLLNGQNSKKLSFERYIQINYLDQITEAANIRLNHLSNGQFELRRSDRLEKHA 906 Query: 929 -SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDE 984 L ++V D + D +RD +TLSGGE F SL+LAL ++D++ I+++F+DE Sbjct: 907 KQSGLGLDVYDAYT-DQLRDVKTLSGGEKFNASLSLALGMADVIQSFQGNIHIETMFIDE 965 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 GFG+LD E+L+ A+D L L SG+ IGVISHV +K +P + V+K Sbjct: 966 GFGSLDEESLNKAIDTLIDLQDSGRMIGVISHVPELKSAMPAVLHVEKTLNGHS 1019 >UniRef50_A8UUY7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUY7_9AQUI Length = 975 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 213/1046 (20%), Positives = 445/1046 (42%), Gaps = 78/1046 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ K IDF+R F F I G TGAGKT+++DAI ALY + PR Sbjct: 1 MRPLKLELEGFTVYKKPQSIDFSRLNF-----FIIQGKTGAGKTSIVDAITYALYGKVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + ++++ + +EF V G+ YR + + Sbjct: 56 YGRSRSTTSMVLSKGSNRLKVSLEFSVGGKRYRIERFYR---------EKPKEDIVRVEE 106 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN-AKPKERAELLEELTGT 179 +G+ L K + E ++TGLDY FT+ +LL QG+F FL + P+ER E+L +L Sbjct: 107 EGRRLDLKKAEVEEWVESITGLDYNTFTKVILLPQGEFDRFLKPSSPRERREILIDLLNL 166 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 EI+ ++ + + + EL L+ + + L+ E+V+ + + L + ++L Sbjct: 167 EIFDRVRELASRNYSALEGELNALKTELESLEGLSEEEVKEIENRRKALQERSEELKRVI 226 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + ++ L ++E ++E ++ L + L+EEE + ++LA+ P+ ER+ Sbjct: 227 SELEERLRRAREREETRRELEEAKEKLSKLLSEEENFKALRERINLAKKVLPYLPYIERV 286 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ---QQQQSLNTWLQEHD 356 E L +R Q E+V +I + + ++ L + E + Sbjct: 287 EELGRELRELRLQKEKVLKDRVRVEGELKNIESEKEEVERAYASLPKLREELQSLAGERE 346 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 R E R+ L + ++ L E+KL A + + Sbjct: 347 RLSLAGEEIRSIEELAESLREKRKQLEEKEEVLKDREEKLQKGEAYIRQIEEELKELGYD 406 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 + +R L++ V +++ L + Q ++N+ E + E + +E + Sbjct: 407 EEEYERLLKE---------VERKRTLLEDQKKLENLKIELKELEGKRKEKLRELEELRAE 457 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 L + ++ + R L G CP+CG+ A E + + SR+ L+ Sbjct: 458 LKQAEEELQKRSLKVYAHRIREHLHDGDTCPVCGNIYSGAYEEVEGADIEELSSRVKELQ 517 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 ++ +E +TL ++++I+ + + ++ + + Sbjct: 518 GKLITSEKELSTLEAKIESISLEAESLSSKLKGWENVLK--------------------- 556 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 +D + + ++ EL+ ++ ++++ Q ++ E+ + + + A Sbjct: 557 -----IDIEGRLGELEKKKLKKKELEDKLRKYSERYNQRLKEREEALREVERLRSELASL 611 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 E+ + L + + Q+ +N L+ L+ + L +E + + E + + + Sbjct: 612 ERSLSEKRNKLEGMLGKVPTLQEVENRLSELKRKESDLRDKVEEIERRREEVNSYQEELT 671 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + + + ++ +++ + L + D + M++ Sbjct: 672 RKLVALDTRLKEIEGSLESKEREKRENNRKLAPLFEELG---------DIERVREYSMEQ 722 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + L+ LE+ +N ++ + + + LA ++ T VE++++EL Sbjct: 723 EKLSSLEKELENYLTEKNSLEERIRELESKLASVEE---------TEAVERLEEELVGKK 773 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 +L E GE++ +Q + ++ L ++++++ +++ + ++ + S ++ + Sbjct: 774 GELEELIRRAGELKSLAEQKREMLDKKDNLTRRVSEIEKEIGLYSRISEDLKS---NRLQ 830 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 F L L +V A++ L Y L E+ V+DT Q RD ++LSGGE+ Sbjct: 831 DFVASLMLKRVVERASEYLHEFTNAYYLGMDEKG--ELVVIDTVQG-TERDVKSLSGGET 887 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVIS 1015 FL SL+LAL +SD++S ++SLF+DEGFG+LD ET + D L+ + + +G+IS Sbjct: 888 FLASLSLALGVSDVLSADAHLESLFIDEGFGSLDEETRERVSDILEVIKQRINRMVGIIS 947 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKL 1041 H+ + +R +I VKK ++ Sbjct: 948 HIPDLADRFHQRIVVKKHGDFSTVEV 973 >UniRef50_C4L2Q2 SMC domain protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2Q2_EXISA Length = 1002 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 195/1061 (18%), Positives = 410/1061 (38%), Gaps = 76/1061 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ IDFT+ +F ++G TGAGKTT+ DA+ ALY Sbjct: 1 MRPVELMIQAFGPYAERETIDFTQ--LVGRSMFVVSGRTGAGKTTIFDAMTFALYGRASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + + F ++GE YR + + + + Sbjct: 59 ALRNASDFRSQYAQPELKTEVDFSFTIRGERYRIVRQPQQPHPKNKTPIPHEAILYEWED 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K LA KV + E ++ L Y +F++ +LL Q QF L++ E+ ++L+ + TE Sbjct: 119 GWKPLATKVNEVQERIESILQLSYEQFSQILLLPQNQFRQLLDSNSNEKQQILQSIFKTE 178 Query: 181 IYGQISAMVFEQHKSARTE----LEKLQAQASGVTLLTPEQV--QSLTASLQVLTDEEKQ 234 Y E++ + R + +E+ + + + + E+V QS+ + L + E+ Sbjct: 179 AYRTFQEKWGERYSAYRKQVEWAVERTRLKLLELEDESIEEVSTQSIDEIQRWLDEREEH 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 LI + E ++A + +AL E E+ LA + RN Sbjct: 239 LIATCETALAQKQTYATALEEARDALEKAKALITLFKEREETDRALAIFLNGESIRNETR 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 E +A + + ++++E+ ++ + + + + T ++ Sbjct: 299 ELLTNLEVAANIRPVFERLQELEQLVRRLTMEEQTSSTKLEHLQSTQSKLVERQATIEKD 358 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + + +R L + QL + ++L + + + Sbjct: 359 KEEVISRKERLRIVDEMMPRI-KERTTLVTLRDQLMNRAKQLATFSK--ESRLQELQEKE 415 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 + + V + LA L+ + ++++ + +++++Y + Sbjct: 416 QQLVESVKSEPSERAVDAERHVDRLVHLASLETKARELSKQLDECERTGKDVQRQYVTQQ 475 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 + V + + + ++ L G+PCP+CGS H + + + Sbjct: 476 E----VVSTFKHQEQLLLARQLSETLVDGEPCPVCGSRHHDIPQHEETVTNI-------- 523 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 E +LD ++ +L + +S Q +A+ Q+ + + Sbjct: 524 ---------TERDAAVARLDDLSTRLIEARADYRSFYQQLEAIRQELDQASIDIQFDGDI 574 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 +++ W + +R+ R+ + Q++A +Q+ Q ++Q + ++ +++ L Sbjct: 575 TEELNKWRTRAERLQREERIRQENERTLRQLSAEIRQLEQERRQQFEERERVVSELEATQ 634 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 L Q E ++ Q E L+ RI L +E E Sbjct: 635 QNLHALG---------QSEETTFDALQRERADLEQRIAMLMKQVEAYEHEFETMKKALWK 685 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 E + EQ Q + + ++ T + F +Q + Sbjct: 686 EEERLSLIREQLSEASKQYD------AQQTIWVNQLESSHLTRERYESFANQIDKRTMIR 739 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 ++ + E ++ Q + + + D + + V+++ + Q Sbjct: 740 EQLQREEEEGVRLRHLKQMIE------------EKLENQERPDLHGMEMKVKEVNEWSEQ 787 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 ++L + R + + R+Q +++ + + +N + Sbjct: 788 ASKQLITAQDALSRHRHVISEWNTLREQTAQEERKLETIKLIADTGKGIN-----PQKMT 842 Query: 895 FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK-------ASEALEVEVVDTWQADAVR 946 F + Q D ++H AN L ++ G++ L+RK A LE+ V D + + R Sbjct: 843 FETYVQTAFFDQILHAANIHLDQMTSGQFRLERKVETAKGNAKSGLELLVFDAYTGQSRR 902 Query: 947 DTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 + LSGGE F SL+LAL L+++V S ++++ +DEGFGTLD+E+LD A++ L + Sbjct: 903 -VQNLSGGEGFKASLSLALGLAEVVQQLSGGISLETMLIDEGFGTLDAESLDQAIELLMS 961 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 L A+G+ +GVISHV+ +K+R+ +I+VKK +L Sbjct: 962 LQATGRLVGVISHVQELKDRVDARIEVKKSRSGSSIQLIVE 1002 >UniRef50_Q97FK1 Nuclease sbcCD subunit C n=1 Tax=Clostridium acetobutylicum RepID=SBCC_CLOAB Length = 1163 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 187/1183 (15%), Positives = 424/1183 (35%), Gaps = 157/1183 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + +R+K LNS + E +I+F + GLF I GPTG+GKTT+LD+I L+LY E R Sbjct: 1 MKPIRVRIKGLNSFENEQEINFEK--LTKRGLFGIFGPTGSGKTTILDSITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGE---AYRAFWSQNRARNQPDGNLQVPRVELA 117 S+ + M + EF++ G+ Y R + ++ Sbjct: 59 KSS------NFMNTNCNSLNVSFEFQISGKEIKRYLVEREFRRDNKTGSVRSKSAKIVDI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + ++L + K E + GL FTR+++L QG+F+ FL + KER +LE L Sbjct: 113 TGDEVEVLEEGAKSVNEKCQEIIGLSLDDFTRTVVLPQGKFSEFLKLEGKERRNMLERLF 172 Query: 178 GTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 + YG ++S + + + R + L + G + + ++ L+ D + Sbjct: 173 NLQEYGDELSFKLARKIRKEREKENVLVGELKGYENINEDVLKERRELLKENNDFFNEAS 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + ++ N LQ E + + + + ++++ + L + + ++P+ Sbjct: 233 KEYLKAEEEYNEGKEVWGLQIEIEEKNRVRKDLMEKKDEIDLKEKRARLGESSSKVKPYI 292 Query: 297 ERIAEHSAALAHIRQQI-------EEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + +++QI + ++ + + + + K + + + Sbjct: 293 DNYENTLKQIDILKEQILSRENTMKAISLEKEDMEKKLSIAKDNKEKALPKFMIKHHIIL 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQ-----------LTHAEQKLNA 398 ++E D E + + + + + + + +Q + + E K++ Sbjct: 353 DAIKEKDLLDNIKLEKKRLQGKIEKLSLEASNKEELIKQNIKDIDSLTLKIQNLESKIDN 412 Query: 399 LA-------------------AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 L L + + L ++ ++ Sbjct: 413 LKVPEEYKNKINEGIFLLRNYDEKLKHKNKLGLDCDKFQVDFEKAKSKKEMLFNKLEEER 472 Query: 440 KRLAQLQVAIQNVTQE-------------------------------------QTQRNAA 462 +L +Q++ ++ Sbjct: 473 SKLDTYTKKLQDLNKDFPKDDVLLTFQEKLNDSRQKWAKYSEYNESLKASLRVVENSEQV 532 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH-------- 514 L ++ + +++ V E R +L++G+ CP+CGS H Sbjct: 533 LRTKKEEMTKLEDKISKVNIKIESLETENMAHVLREKLKSGEACPVCGSVHHIKEGFKEV 592 Query: 515 ---------------PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLD----- 554 ++ E + ++ + E +KKL E L + Sbjct: 593 DLKALETLKSELEGFEKKRKFENEEIVMCEASIKVEEKNIKKLNESINNLGEEFKEVSLE 652 Query: 555 ---------------------AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 + ++ + + + Q + + Sbjct: 653 SMEKKFNYLKEKVNKFNLEKIQLDDNIKDLSERSNKIEVEYQKEKTVEKQCEKRIVDLKS 712 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQ---GQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 L++ + L+ + + + +I + ++ + +I+ + LL Sbjct: 713 ELEEAIKEFNEVAYTIENLKAELKIQDFKFEMKEILEKERVRVEAEGEIKDLRNLLNIRH 772 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR----IQQLTPILETLPQSDE 706 T + + + L+ + E + + NE L + L + E + + + Sbjct: 773 TEKEQLMDKCSRLKEELSKNKAELKEKDKIINEKIELIKNKVGVLDNLYELKEKIEGTIK 832 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 + + + ++ ++ + + + L F++ Sbjct: 833 KIEEQYNLCDKKMNEIEDKYRKCSDEIIKYHSNLSSLKDRKVNDIDKLNKILMEEKFENI 892 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 + ++++ + L+ + +N+ + V ++ L + VE Sbjct: 893 EKAKENYLNDKEINLLKSDVEKYKNELSKVNGAVEVLSKKLKNRKLTEEKWIEIQNNRVE 952 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 + + + ++ +++K ++ L++ ++ ++ L L Sbjct: 953 KASKA--------KALQERSIKLEEEVKNIEIKLKELGKLLKTKQELEHKLSLLDDLEKL 1004 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVR 946 +G KF +F L + A+++L + G + + + + D A R Sbjct: 1005 F---KGKKFVEFVALNQLKYISIEASKRLKEITGGNY-GLEVDDNGKFIIRDYKNGGAKR 1060 Query: 947 DTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 D TLSGGE+F+ SLALAL+LS+ + ++ FLDEGFGTLDS L+ +D+L+ + Sbjct: 1061 DASTLSGGETFVTSLALALSLSNQIQLRGSAPLELFFLDEGFGTLDSNLLEVVMDSLEKI 1120 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLESTFA 1046 ++ ++G+ISH+E +KER+PV++ V G+G SK++ + Sbjct: 1121 HSERLSVGIISHLEVIKERMPVRLIVSPAEAGVGGSKVKLEIS 1163 >UniRef50_UPI0001C34C0F ATPase involved in DNA repair n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C0F Length = 1061 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 197/1099 (17%), Positives = 400/1099 (36%), Gaps = 94/1099 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + S + +IDF +G+F ITG TGAGKTT+ DAI ALY ET Sbjct: 1 MKPLRLVMSAFGSYLKQTEIDFEAL---GDGIFLITGDTGAGKTTIFDAIAFALYGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-------LQVPR 113 E E+ F +GE YR S + R P Sbjct: 58 QRRDGSMMRSQSALPKQETRVELVFSDRGEVYRIVRSPSYERPSLRKKKDGEQAMTTQPA 117 Query: 114 VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 DG K+ D E + G+D G+F+++ +++QG++ L A +ER E+ Sbjct: 118 RVSLFLPDGSEFPGKISDVNEKIREIVGVDRGQFSQTAMIAQGEYMRLLTAGSRERKEIF 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKL-----------------------QAQASGV 210 + T +Y +I + E++ +LE + S + Sbjct: 178 SRIFDTGVYERIQRKLRERNSELAKKLEDNGKFCLREAERIRVPEESGLAPRWEQAVSSL 237 Query: 211 TLLTPEQVQSLTA-------SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQ 263 E + + E+++L+ + + R EL+++ + Sbjct: 238 ESCPEEILAVSKEACSFSRMEAEKERREDERLVDELHRLGSRIERARRVSELKEQEKAAE 297 Query: 264 QALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 + L+ + +E + + L L + A + + + +++ E+ +L + Sbjct: 298 EHLRLLQSSQEVFEEKKRRLKLGRQAAPVWQKEDEARKKEGEWIEAGERLGEIKEKLSAL 357 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 + + + + +Q L QE R E A + RE + Sbjct: 358 SEDFLQAEKDSGEAESRYRAEQPGLLEQEQELKRSLPLYRELEQCMASIRAEEVRRERTK 417 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 + ++ ++ A ++ + L R + L + + +L Sbjct: 418 REEEASAEGQEDCLKRLAALKAEREEKRDSGLN----LERCRAEIERLKKR-KDEVTQLG 472 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 + ++ + + L + Y++ + I + +L+ G Sbjct: 473 RKLKELEEREKRLKEEQDILGRESRNYEQAAADYDRLYRIF----ILSQAGLLAEELREG 528 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 +PCP+CGS SHP E+ + + + + Sbjct: 529 KPCPVCGSLSHPCPARLLDERVTA----------------EQLDRAKKVRETADRAARER 572 Query: 564 ENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQG 623 ++L+ + + Q +A+ ++ D Q+ + L + E Q Sbjct: 573 LACVRALKAETGVVKSQCEAMYEAIRKPGADEVKEHAVFDRQNAFQEMRELFFELQEEQR 632 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE 683 Q ++ + + ++ + L+ + E LA + S + R E Sbjct: 633 QREREEKEWEKARIRLSEIDVLMEKEEKKREDLERKRKELSGELAGTESRLSSLKARYEE 692 Query: 684 LTA--LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 L +Q L + ++ E+ + ++ Q L + + ++++ Sbjct: 693 QKKQLLFETGEQAEERLSRIQEAAGKLLAEKEKAEKRKEELGRQTGLLKGRLASEEEKER 752 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 ++ ++ LQ F ++ + +A++ E +LE E A + Sbjct: 753 KLLSQKEQIYGEWQELLQKMGFSGEEEYRSAILKEGEQERLEADISQYEQSLTAASS--- 809 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 Q + + + ++ Q+ R + E +L ++ + Sbjct: 810 -------ALLQCQKSLEGLEEEELSPLLEKEEAMKQERRLASFRLSESASRLAENEGACR 862 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSK----EGDKFRKFAQGLTLDNLVHLANQQLTR 917 + + L+ + ++ ++ L K F+ + Q ++H AN +L R Sbjct: 863 ELERLLGKRRRLLEEYGPVNRLCLAADGKVSGTARMDFQTYVQRQYFSQMIHAANIRLRR 922 Query: 918 LHGRYLLQR---------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 + L R + L+++V D+VRD +TLSGGE+FL +L++ALA++ Sbjct: 923 MTQGQFLLRCREFGDLSLRGEAGLDLDVYSVDT-DSVRDVKTLSGGEAFLAALSMALAMA 981 Query: 969 DLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 D++ + +D+LF+DEGFG+LD E A+ L L+ + IG+ISHV ++E++ Sbjct: 982 DVIQNTAGSVEMDALFIDEGFGSLDDEARARAISVLKELSGGKRMIGIISHVAELREQMG 1041 Query: 1026 VQIKVKKINGLGYSKLEST 1044 +I VKK + +LE+ Sbjct: 1042 RKIVVKKGEEGSFIRLETE 1060 >UniRef50_A5N4G0 Predicted exonuclease, sbcC related n=2 Tax=Clostridium kluyveri RepID=A5N4G0_CLOK5 Length = 1164 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 206/1183 (17%), Positives = 426/1183 (36%), Gaps = 160/1183 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL++K LNS + +IDF + G+F I GPTG+GK+T+LD I L+LY E R Sbjct: 1 MKPISLKIKGLNSFESSQEIDFEK--LTERGIFGIFGPTGSGKSTVLDGITLSLYGEVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGE---AYRAFWSQNRARNQPDGNLQVPRVELA 117 S+ + + + +F++ + YR R + + R+ Sbjct: 59 KSS------NFINVNCNNLYVSYKFQISEKKVKTYRVEREFRRDQKSGSVRSKTARIISI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 KIL + K+ E + GL FTR+++L QG+F+ FL + K+R +LE L Sbjct: 113 EDNIEKILEEGSKNVTEKCQEILGLKLEDFTRTVVLPQGKFSEFLRLEGKDRRNMLERLF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G + YG +S + ++K + + +L+ Q G + E ++ ++ L + ++ Sbjct: 173 GLQKYGDNLSFKLNLKNKEEKMKFHELEGQLKGYEGINEEILEVKMMQMKQLENSYEETK 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 ++ N +LQ E ++ L+ E + + + LA+ ++P+ Sbjct: 233 KEYNYLEKKYNDENDLWKLQLELEQKSYELELLTKRENEIKNYEKKIKLAEGTLKVKPYA 292 Query: 297 ERIAEHSAALAHIRQ-------QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + SA + + +I + L R K+ EL+ ++Q + Sbjct: 293 DNFKNTSAQIKITKDNLSNLNIKINSIKKNKNEIEILLNEARDKKDKKLPELKVKEQKIK 352 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTS---------------------DREHLRQWQQQ 388 ++E + E + + + + Sbjct: 353 DAIEEQKLLEKLRQEKILLENDIESLKEKFNNKNDQVITNENYTSNLLNEMKTKEKLIET 412 Query: 389 LTHAEQKLNALAAITLTLT---------ADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 L +E+ + +TLT + + + L I + Sbjct: 413 LKISEEYREKINEGIITLTNYENKILQRDKLIESIKNCEENIKAAVYRKEILLKHINEIE 472 Query: 440 KRLAQLQVAIQNVTQE--------------------------------------QTQRNA 461 K L+ + + + Sbjct: 473 KTLSHCNTRLNILIKTCPGDENTLLNFHQRLSYFKTKWDKYNEYMDLLDKNKGMVENLEK 532 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE--A 519 L + + +++ Q R L+ G PCP+CGS H E Sbjct: 533 DLRNITAFESNMRNSIEELEKKIYQFERDNMAIMLIHTLREGDPCPVCGSVYHEKKEMGK 592 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL--------- 570 +S L +N+++K +E +R + K ++ ++ + + L Sbjct: 593 IDRDNLEKLKSHCLEKKNKIEKSTKETIEIRTNIALKRKNIEENKKKIEELGEDFKSTPI 652 Query: 571 -----------------RQDEQALTQQWQAVT-----------ASLNITLQPLDDIQPWL 602 ++++ + ++ +A+ L I ++ + Sbjct: 653 KILQDKFYKLKQQIYEFKREKSLIEEEIKALKDNKNSLDIDYNKELTIEIENSTQLIKLQ 712 Query: 603 DAQDEHERQLRLLSQRHEL-------------QGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 E Q++L+ + L +I ++ ++++++ ++ + Sbjct: 713 QDLKLEEEQIKLIKDQLSLLKADLSVEDLKNKANEIIETQKRTSSLEREVKKIRKTIEVK 772 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQS----WQQRQNELTALQNRIQQLTPILETLPQSD 705 + E + L+ +Q + +++ + I L + Sbjct: 773 QSEKDEIRYYITELKEKLSEKQTRTREMNKSIVEKEYNIKNKVGEITDLNHFNREVCNLI 832 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E E + R++ ++ ++++ Q V + K + + L F+D Sbjct: 833 EKIESEYIKTEKTARKIIKEYDEINNKIILAQSNLVNLNERNIKEEKNLKSILYEQGFED 892 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 M++ + +L + Q N + + + + + Sbjct: 893 IYEVEKFFMNKSEIEKLNKEIQEYRNSISRIKGAIENIYKNMKGR--------TLTKDQW 944 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 + Q + + +L + + + +++ + + L+ + ++ ++ L Sbjct: 945 YKTQNDKNKKSYELEKLYEDKITLNKEVTSINTRLLELKDLLNKKKKIEHKLALLSDLEK 1004 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADA 944 L +G KF +F L + A++QL + G Y L+ + D Sbjct: 1005 LF---KGKKFVEFIAANQLKYISLEADKQLREITCGNYGLEVDEDG--RFFIRDYKNGGK 1059 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 RD TLSGGE+F+ SLALALALS + ++ ++ FLDEGFGTLD L+ +D+L+ Sbjct: 1060 ERDASTLSGGETFVASLALALALSSQIQLKGRSPLELFFLDEGFGTLDDNLLEIVMDSLE 1119 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGL-GYSKLEST 1044 ++ +IGVISH+E +KER+PV++ V G SK+ Sbjct: 1120 KIHNDKLSIGVISHLEVIKERMPVKLIVTTAESGMGGSKVRIE 1162 >UniRef50_B9JT07 Exonuclease protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JT07_AGRVS Length = 1024 Score = 333 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 212/1077 (19%), Positives = 385/1077 (35%), Gaps = 89/1077 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ G IDF + GLF I G TG+GK+T+ A+ AL+ E R Sbjct: 1 MRPVRLVMQAFGPYAGRQSIDFREA--VAAGLFGIYGQTGSGKSTIFSAMTFALFGEAAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S E F++ Y + R + G + A Sbjct: 59 AEQDTISLRSDHASPDLATEVEFVFDLGARRYVIRRRPEQMRPKQRGGGETRDAHEAWLF 118 Query: 121 D--------------GKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D GK+LA+K + E L G +F + +LL QG+F AFL AK Sbjct: 119 DATGLGESEITAAQPGKVLAEKKIGLVREKITDLLGYGPEQFKQIVLLPQGRFEAFLAAK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ-ASGVTLLTPEQVQSLTAS 224 +ER ++L L +Y +++A + +SA + + +A + + +Q+L Sbjct: 179 TQERQDILSALFDVSLYRRLAAKLKSDAESAERLVREERAVCLRRLGADGFDSMQALMDG 238 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 + A+Q + + + ++ + +++ A ++K Q ++ Sbjct: 239 IAEAASSLTDRQQAEQHLRAEADAARASLQAARDTDNQFKSMDAARQAKQKTLDQATDMA 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 Q +A+ + +++ ++ L M ++ S + A + A QQ Sbjct: 299 ALQAQVTSAERARTLADAENRVIEAQRECKDAEAALSLAMQIQTSTQATAQQAQAAYLQQ 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI-- 402 QS + Q + S R+ Q++ LA + Sbjct: 359 IQSKSEIEALRRTIDQMERDRDVLEKATGLTASVEAAKRRVQEEQAAFRTAEAGLAELTG 418 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 + + A H ++ L +L AL Q+ + + + + +Q Q+ Sbjct: 419 KRQVREQALKQARLAHERRQSLTANLTALQAQVKQAE-IVERAEKDLQQAYQQLNHSANI 477 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 E + + + + A+L G PCP+CG+T HP + Sbjct: 478 HAERQAQTTKAAALFDQAERRLA----SAQALHLAAKLGPGLPCPVCGATDHPTPAMGDS 533 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 E G++++ A + K EE + Q +E Q D + QQ Q Sbjct: 534 AEAGLDKAFREAKQALEKARLEEQHSA-----TAHASAQATVDERQGRLGDLERPEQQIQ 588 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + + + L + P +D L + Q ++ H ++ + + Sbjct: 589 ELRQDMEGMERALRGLGPAIDIAAAETALENLGKAITDAQARLDQHRDRLAALKTETSNG 648 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L L+G A L L L+ Sbjct: 649 ETRLAEMLSGIAAHL-------------------------------RDKAALERQLQQSK 677 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 E E + H + + +K F+ L+ + Sbjct: 678 ALMTSRETALKRSEEAATATREAAFSAHKDSEAAENILTERQARFEKENQGFEDRLRDAG 737 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + L +L+ LE + +T Q + + Sbjct: 738 -----------LTRDDLNRLKPAIMTLERDKATIETHQRQLQRDSEKLLELETALTGKQP 786 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + Q+ LA T + +L + R++ + +++ + Sbjct: 787 PDLLAHQEALASAEAAFDTAVTLRAATAARLDHLQNLRKELAGIAKRLDEAEATSGPLRE 846 Query: 883 LNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR------KASEALE 933 L L ++ K FA G + ++ AN +L + GRY L+R + L Sbjct: 847 LAGLFDAQNRQKLKLETFAIGAMFEQVLQAANLRLGPMTNGRYRLERDIESGGRGKRGLG 906 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLD 990 + D A R T TLSGGE+F+ +LALAL L+D+V S K R+D++FLDEGFG+LD Sbjct: 907 ILAFDVHTGKA-RPTATLSGGETFIAALALALGLADVVESASGKVRLDTIFLDEGFGSLD 965 Query: 991 SE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 +E TLD L AL++L + +T+G+ISHV ++E IP V+K + + + Sbjct: 966 TENGSGTLDLVLQALNSLASQNRTVGLISHVPLVQEAIPNGFYVRKDSDGSHVEARG 1022 >UniRef50_A5ZTK9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTK9_9FIRM Length = 1061 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 190/1092 (17%), Positives = 400/1092 (36%), Gaps = 87/1092 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+++ S E IDF + + LF ITG TGAGKTT+ DAI ALY E Sbjct: 1 MKPLRLKMQAFGSYGKETTIDFEK---VNQNLFLITGDTGAGKTTIFDAIVFALYGEASS 57 Query: 61 LSNVSQS--QNDLMTRDTAECLAEVEFEVKG----EAYRAFWSQN------RARNQPDGN 108 N + +E E+ F E Y R N+ Sbjct: 58 SLNKKEGVVLQSQYVDFDSEPYVELVFSEGRDEKREIYTVRRVPRHLKTITRGANKGKPK 117 Query: 109 LQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 V L + + K+ + GL +F + +++QG+F L AK + Sbjct: 118 ENTGSVSLIMPDGMEYPS---KETDRKLQEIVGLTKSQFMQVAMIAQGEFMDLLRAKSDD 174 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 + + +L TE+Y I + + ++ E+ L+ Q G + +L+ L Sbjct: 175 KKVIFRKLFNTEMYQDIVTELGNRKRAKEKEIAVLKTQCQGEVSRIRIPETYESETLKQL 234 Query: 229 TDEEK-----QLITAQQQEQQSLNWLTRQDELQQEASRRQ-----QALQQALAEEEKAQP 278 + + +L ++ ++ +WL + +L ++ R+ + ++ EE + Sbjct: 235 KKQLEDGEMTRLTDFLEEVEKLCDWLEKHTDLAEKDYRKSGKSRDEKREEYTRAEEVLKW 294 Query: 279 QLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNT--RLQSTMALRASIRHHAAK 336 + Q + +I E +A ++ IR E T L A + Sbjct: 295 FIQLEDAEQKLQECADDESKIVETTALISRIRNAYEIRETGVLLNDAERRLAELEQSLKT 354 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWN-NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQK 395 Q +L +++ T + ++ + E + + E L Q + AE Sbjct: 355 QEKQLPILEETRKTAEKAEEQKKLIRDQELQSYSKIAEKVQKALELLNQIKSLRVQAEAD 414 Query: 396 LN--ALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT 453 ALA+ + T + + + + L + ++V + + + +Q + Sbjct: 415 RKNCALASENTQKVRKQQETLEQKEIQWKKQSEELAEVDKKLVLAENKKQEADAVLQEIK 474 Query: 454 Q------EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEAR---IKTLEAQRAQLQAGQ 504 + Q + R+ Y + T++ V T E+ A+L+ G+ Sbjct: 475 DVRVLGNQAEQCRKNAIKTRENYAKITEKYNAVNTEYEEVRLYFLNAQAGFLAAELEPGK 534 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 PCP+CGS HP +++ +L ++ V KL ++ G A + + Sbjct: 535 PCPVCGSIEHPHPAKKDVESVDISEEKLQNMQTNVDKLRKDQEKAAGDAAAARSEYDTRK 594 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH-ELQG 623 + + Q Q + + + + + ++ W E L+ ++ +++ Sbjct: 595 DTYIASVQKLQERLHRSVSSITEQSSVTEMSNALENWKQELAEELNNLQRSARLLVKIRE 654 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE 683 + +Q Q Q ++ + + A + + + + + +E + + Sbjct: 655 ALQNMEKQKKQLQDTYDECTEKEKAAVEKLAGSEAALENVKGSVEFKTEE-----EARAA 709 Query: 684 LTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 L ++ Q + + + + + + ++ + + Sbjct: 710 LIQAESSKNQAEEVYQKVLSEAKKAANAQKQAETLISRYQQEIPEQKKCVEDRKTSYTEV 769 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 + Q ++++ ++ ++ E ++ + Sbjct: 770 MEIKQMTESEWKELVETYS-----------------------REAAEEFQKTVNAYYEKK 806 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 + LAQ G +E+IQ+E + +E ++R + D + Sbjct: 807 SVALAQKDSAESAIGEEQKPVLEEIQKEREAAETEYQEKEKIYNQLRMDNRDDREVFDAL 866 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSK---EGDKFRKFAQGLTLDNLVHLANQQLTRLH- 919 +++ + ++ L + + Q L+++++ AN++ + Sbjct: 867 SGRLEERKTIVEEHARIDTLYRMTSGNVSGSRMDLETYVQRYYLEHILYAANRRFQEMSA 926 Query: 920 GRYLLQRKA--------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 G++ L+ + L++ V T R+ RTLSGGESF+ +L+LAL ++D + Sbjct: 927 GQFELRMYDLEKAGEGKNRGLDLMVYSTVTGKE-REVRTLSGGESFMAALSLALGMADQI 985 Query: 972 ---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 S +D +F+DEGFG+LD + + A+ L + + IG+ISHV +K+ I Q+ Sbjct: 986 QQSSAAINLDMMFIDEGFGSLDEHSRNQAVRVLQEMAEGSRLIGIISHVSELKQEIEDQL 1045 Query: 1029 KVKKINGLGYSK 1040 V K + K Sbjct: 1046 LVNKDENGSHVK 1057 >UniRef50_B9DP77 Putative ATPase involved in DNA repair n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DP77_STACT Length = 1011 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 196/1081 (18%), Positives = 402/1081 (37%), Gaps = 110/1081 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+L L+N+ E IDFT+ +N LF I+G TG+GK+ L DAI ALY + Sbjct: 1 MKPLNLHLQNVGPFMEET-IDFTQ--LKNNELFLISGKTGSGKSMLFDAIVFALYGKAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S + + E+ F++K + ++ Q + + N P + + Sbjct: 58 SSRKETALRSHFADGKSPMEVELVFQLKDKQFKVVR-QGAFIKEGNKNPTNPNLSVYELE 116 Query: 121 DGKI--LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DGK KV L G+D +F + +L QG+F FL +K + E+L L Sbjct: 117 DGKYELRESKVTAGNNYIEGLLGVDIEQFRQLFILPQGEFKKFLFSKSSAKQEILRTLFN 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL---------- 228 T + + M+ Q+K + ++E Q + + + + L Sbjct: 177 TNRFETLQQMLVNQNKEEKKKIEARHQQIEQLWNKAEDFDDESLQAYKTLPSIQTEKLLD 236 Query: 229 ----------------TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAE 272 E+ Q + + + + ++ + L+ Sbjct: 237 AIPDFERIGKDIYKHLEKEKTQQEEVKHKAETAYRDAEDLNQKINDRKTLTDELEALEKH 296 Query: 273 EEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 + + L + R L E I+ HS L + + E++ +Q A I Sbjct: 297 ASEIKILETKLKKIREVRPLHQIIENISAHSKKLDELNVKCEKIEHNIQQYQASLQKITD 356 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHA 392 A L + + + + + + + ++ + + E Q ++ L Sbjct: 357 E----QAALSEAEDDIEAKRKFINETQYFYQNIKQYQIAYDSKNQVHEDYNQSKKDLNDN 412 Query: 393 EQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 EQ L+ + A+ D L Q +Q + + + + +++ Q ++ + Sbjct: 413 EQLLDEMKAVHQNERPDY--ERLHQLTQQLFDLKQEIKDTKEAIEKKEEYDQRVKKLKAL 470 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 QE TQ NE+++ + E + + ++ ++ LQ G CP+CG+T Sbjct: 471 EQEMTQNMRKSNEIQEAISQFNTNQ------LEFDNQEAMIKKLQSMLQPGDQCPICGNT 524 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 + + + +L L + + + L + + + Sbjct: 525 IDSPSDHLDFEQLKAQKEKLNDLNENKEAIRAAYSKLEAEYSMLKNE------------- 571 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 T P ++ Q D ++++E+ + + +I QI Sbjct: 572 ------------TDKFEHQEVPENNEQILADLKEKYEKTEADKKHQEKRNKEIEKKQTQI 619 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 + +++I+ Q L + E+ N+I Sbjct: 620 QEIKEKIQNLQLALTQKKAESEKINRLIEAFENG-------------------TTFNKIN 660 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 ++ + + + + + + ++ ++ Q + + Sbjct: 661 DFIKGFSEKEEAVKAHQTKIEALKQQETEAKQNIAVEQTKFKSAQDNRKETQKEKTNLEQ 720 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 Q + +Q L Q+E+ ++ ++ + + + + Sbjct: 721 QSQSEMQNIGIQSTDEVQEILDLMPEKEQIEERIKSYHEKQNNLSHKIAELKALIGNQE- 779 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 +E++ + L +L E + E +++ + N ++ + + + + Sbjct: 780 ---------KPDLEKLFKNLELQKTELEEKSKRLNEHEFKMQLNTSNFKEIKEHIDVLEK 830 Query: 873 MTQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKA- 928 + ++ L ++ K K + L+ ++ AN++ ++ RY+L+R Sbjct: 831 ELSEQQEIFDLAEVLSGKNIQKLTLENYVLVYYLEMILEFANKRFMKMTNNRYILKRSDV 890 Query: 929 ----SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLF 981 LE+ V D+ ++ R TLSGGESF SLALAL LS++V S ++S+F Sbjct: 891 VTQGYSGLEIVVFDSH-SNKTRHISTLSGGESFQASLALALGLSEVVQQESGGITLESMF 949 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +DEGFGTLD ETL+TALD L + ++G+ +G+ISHV +K+RIP ++VK ++ Sbjct: 950 IDEGFGTLDQETLETALDTLLNIKSTGRMVGIISHVSELKQRIPTILEVKTDAYQSTTQF 1009 Query: 1042 E 1042 + Sbjct: 1010 K 1010 >UniRef50_B2GFI4 Nuclease SbcCD subunit C n=2 Tax=Actinomycetales RepID=B2GFI4_KOCRD Length = 1079 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 222/1082 (20%), Positives = 387/1082 (35%), Gaps = 50/1082 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHE--T 58 M++ + + G+ +DF G+F + G TG+GKT++LDAIC ALY T Sbjct: 1 MRLHRMEITAFGPFAGQEVVDFEG--LNRAGVFLLNGETGSGKTSVLDAICFALYGTGPT 58 Query: 59 PRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR----ARNQPDGNLQVPRV 114 ++Q+ +VEF G + + +R + V Sbjct: 59 TAAKGGRKAQHSDHADPHTGPRVDVEFSAGGRRWHVSRTPAWREPSSRAASGWTERHATV 118 Query: 115 ELARCADGKILADK--VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 L +G+ + D + GLD +FT+ M+L QG+FA FL A KER EL Sbjct: 119 LLRESVEGQWMERGYRPDDVGQQIHHAIGLDREQFTQVMMLPQGRFARFLQAGSKEREEL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 LE L GT++Y I + + A+ +L A+A T E ++ A L +E Sbjct: 179 LETLFGTDVYAGIQDELKARADHAKQQLRDAGAEAQR----TEELLERFRARLLAAVEEL 234 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQE-ASRRQQALQQALAEEEKAQPQLAALSLAQPARN 291 + + +W R+ + + S E A + AR+ Sbjct: 235 PARAQDEVEGTPVASWAPREQAVDETGPSDGPAQWTDPTGETPSATGNEDDGRGPEDARD 294 Query: 292 LRPHWERIA----EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA---------KQS 338 + W +A A+ RQ+ E T Q A + R ++ Sbjct: 295 VTARWADLAGAGGALVDAVDRARQRAAEEFTVAQRRAAGLEAARERLDHFDSLTRRREKL 354 Query: 339 AELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 +E ++ Q LQEHD Q + R ++T + + + +L + Sbjct: 355 SEEHERAQDAARTLQEHDAAHQLQDVVQASRTATREETEAAQRVSDLRTELAPQSPPGRS 414 Query: 399 LAAITLTL--TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + DE A A A R + V + L + + ++ T+ Sbjct: 415 GRQVLAEHAPLLDEQLAARAFSASLRDAAVAAREAARRAVERAGALERDRADMERETRHL 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 Q A ++R+R + + LA+ + EQ EA + + S + Sbjct: 475 QQLEGAEQQLRERMEGERVALAEREHDLEQLRSDTRDEALVRERARSARAAVEASRDYEH 534 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 A + G + R E + E LR + L + Sbjct: 535 -ARATAEQRGRDYERDETARREAARHVEGLEALR--FEHAASALAEELAPGAPCPVCGST 591 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + +T+ L+ + DA + QR + A Sbjct: 592 CHPEPATAAPGDEVTVADLERARAARDAAQDTADASHATWQRAQHAAAEALGRGAEEDLD 651 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 +E+ ++ A E + + R+ A+ ++ + + ++ Sbjct: 652 AVVERARRAAEEETELVARLERAERIARAVASGRETLAEVEERAASTSAEAASARIRVDA 711 Query: 697 ILETLPQSDELPHCEETVVLENWRQVH--EQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + + E + R + EQ L ++ + A + + + Sbjct: 712 AAQHCDREREQLAQSLRGFRDAPRFLEHAEQLLEHLDAWESAHRAHEQAREHARLSTHAL 771 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV--TQTAETLAQHQQ 812 + A+ AS FD AL++ +L + E + + A Sbjct: 772 ERAVSASPFDGAADVSRALLEPGEARELRTWWEAHERDAAALDAELATEEMRRAAALDGP 831 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 R + A + +L +L + + + A Q + I + Sbjct: 832 EREELSDAALSRAALARDDLDMLRDRLTRQLGGLHALVEDITATASQIPDQDARHRGIRE 891 Query: 873 MTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA- 928 + + + S+ + F L+ + +A++ L+R+ GR+ L Sbjct: 892 RAATLGGLADVATATSSENSLRMTLTSFVLAAKLEQVAAVASEHLSRMSSGRFTLVHTDQ 951 Query: 929 -----SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSL 980 L +E+ D+W R T TLSGGESF SLALALAL+D+V + ID+L Sbjct: 952 TRGGGKSGLGLEIDDSWTG-VRRGTETLSGGESFFTSLALALALADVVRAEAGGRDIDTL 1010 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 F+DEGFG+LD +TL+ L+ LD L G+ IGV+SHV MK+RI Q+ V K + Sbjct: 1011 FVDEGFGSLDEQTLEQVLETLDGLRRDGRVIGVVSHVSEMKQRIDTQLVVTKTPQGSHLG 1070 Query: 1041 LE 1042 +E Sbjct: 1071 IE 1072 >UniRef50_A0AJ97 SbcC protein n=19 Tax=Listeria RepID=A0AJ97_LISW6 Length = 1023 Score = 331 bits (849), Expect = 9e-89, Method: Composition-based stats. Identities = 212/1085 (19%), Positives = 420/1085 (38%), Gaps = 107/1085 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L ++ + + IDF + + +F I+G TGAGK+T+ DAI A++ + Sbjct: 1 MRPIKLTMQAFGAYAKKEVIDFEK--LGTEQIFVISGKTGAGKSTIFDAISFAIFGKANT 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV-----PRVE 115 S S D + F +K + Y+ + + GN + Sbjct: 59 FDRESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELY 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K+LA V+D L L+ +F + +++ QG+F L + KE+ +L+ Sbjct: 119 ELIGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEAILQR 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT------------------PEQ 217 L T Y ++ +++E+ K A + + + + + + L+ E Sbjct: 179 LAHTVYYEKVENLLWEKQKEAEILVVEARKKVAELAELSLPDVEITGKTTSEISVLQTEA 238 Query: 218 VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ 277 +Q L L E + + + + Q Q + + + AE+ + Sbjct: 239 IQKEQTVLAELESELSIIRKQTSEAVEKVTLAKEQLLDWQNLDLYIEEVAKLEAEQGVYR 298 Query: 278 PQLAALSLAQPARNLRPHWE---RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA 334 + A+ A N+R R+ E H +Q+ ++++ + Sbjct: 299 AIEGRIEAAKRASNIRSQDALCIRLKEQLETAEHTEKQVATATEQVKAQFLHAKKQKETL 358 Query: 335 AKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 A+Q EL+ +++L + + ++ R + +HL + + Sbjct: 359 AEQEKELETNKRTLFQLEEMEPKIMEFETVIIQKRRAEMEWKEATDHLEKVMKTEQDVIA 418 Query: 395 KLNALAAITLTLTADEVA--TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV 452 ++ + + E+A A+ +H + L + L + + Q Q + Sbjct: 419 EIKLAESQLTEINQAELAHLEAINKHTTVKALIEKNQELVNKRAKMAAWDLEKQTEEQTL 478 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 Q T++ ++Q+ ++ + L G CP+CGS Sbjct: 479 AQLLTEKTTIETTIKQQETNLQKE---------------QAASLATHLHEGDACPVCGSV 523 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 SHP + + L + ++ +S+ Q Sbjct: 524 SHPKLAEFGE--------------------TANFEILEAAKGQLHEKELAINEAEKSINQ 563 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL-SQRHELQGQIAAHNQQ 631 E L + +L+ T Q L + + + + QL+ +Q+ +Q + + Sbjct: 564 LEWQLNEWADVTEVNLDETKQILAENKLLAENLAKKIDQLQTKTAQKATVQSNVETLKNK 623 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + + + + L + E + ++ + +++NELT Sbjct: 624 QNETETVKNHIALQVENSHQQVQLATGKLSYLEESIPVDLRDKVMFDKKKNELTT----- 678 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 S E + V ++RQ + L S Q+ Q+ A ++LQ + Sbjct: 679 ------------SIETHLKQAEQVDASFRQADKDITRLESTLQSAQKTTADAQEALQVQR 726 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 F A++ + F +++ ALM L E+ N E +R A + E L Q Sbjct: 727 EIFKEAMKQNDFPTYESYKQALMSVDELKVQEEKVTNFERKRHLAISRQADLTEKLKNKQ 786 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 +EQ++ + + Q+L + S + R+ + + + Q +Q + Sbjct: 787 ----------KPNLEQLEFSMKEKQQQLTKAEESTMKQRELVTKQKEVVLNYQNSIQAVE 836 Query: 872 QMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKA 928 + + D G L K + F ++ + LD ++ AN +L+++ GR+ LQRK Sbjct: 837 KAEEDYADIGLLADAARGKNARRLTFERYILAMFLDTIIQRANHRLSKMTSGRFELQRKM 896 Query: 929 S-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRID 978 LE+EV D + R +TLSGGESF SLALAL+L+++V + ++ Sbjct: 897 EKAKGNVQSGLELEVFDEYTG-LTRHVKTLSGGESFKTSLALALSLAEIVQEMAGGISLE 955 Query: 979 SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 ++F+DEGFGTLD E+L+ A++ L +G+ +G+ISHV +KERI +++V N Sbjct: 956 TMFIDEGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGST 1015 Query: 1039 SKLES 1043 +K + Sbjct: 1016 TKFVT 1020 >UniRef50_B2AI05 Exonuclease SbcC n=4 Tax=Cupriavidus RepID=B2AI05_CUPTR Length = 1020 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 226/1063 (21%), Positives = 376/1063 (35%), Gaps = 68/1063 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ IDFTR I GPTGAGKTTLLDAIC ALY +T Sbjct: 1 MRPLHLTLQAFGPFAATEAIDFTR--LGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV-----PRVE 115 +Q+ + F + + +R S + R + G V +++ Sbjct: 59 GERSAQAMRSANAAAGLRTEVTLTFSLGAQRWRVVRSPVQERPKQRGEGWVTEPARAQLD 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 L A + + L G D +F + ++L QG+F L A + R +LE Sbjct: 119 LHDGNGWVSKASQPGKVTDAVRELLGFDSAQFRQVIVLPQGRFRELLTASSQARQAILER 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQ-AQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L TE+Y ++ ++ + S R E++ + + E +L + + + Sbjct: 179 LFRTELYRRVEELLKTEAASIRRGAERIAIQREEALRQAGVESAPALADGIATMHAALQA 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L +Q + + ++ + R Q QQA A + AA+ + Sbjct: 239 LQGQEQGARAAQAAAQAALAAGEQVAARLQERQQAQAAHAALLARQAAMDDQRGRLQAAQ 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 R+ A ++ L A A + +A LQ Q Q + Sbjct: 299 RAARVMPAVQAAQAAQRDHAAGAAALAQATGHAARAGQRAMEAAAALQAQVQQADARQAA 358 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA-ITLTLTADEVAT 413 R Q + + Q + E + T ++ L A T +TA+ Sbjct: 359 QRRVAQLEAMLPRAQRLGALQRALHEAEARQAAAATARDRAAARLEACRTAAVTAESALG 418 Query: 414 ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 A Q +A + Q +R Q ++ + A RQ+ Sbjct: 419 QAQLAAAQAQASALQLAALQERARQFERYRQAARSLDAANMQAAGYAQAEQHARQQRDRC 478 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLL 533 LA+ E R L +G CP+CGST+HP + A Sbjct: 479 RTALAEA----EAAWRAGQAARLAQTLASGDACPVCGSTAHPEPARHIAQPLSDL----- 529 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ 593 L+A + L E EA QA L Sbjct: 530 ------------------ALEAARQALLEAEAEAVRCAGQHQAAQLAIAQARERLEELAA 571 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 L D A + + Q +A Q+ Q+ + Sbjct: 572 ALGDASEAAAA--------GVSADIATRQAALAQQRQESASLAQREAAIAASRAARDSAE 623 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 A ++ WQ ++ L L + Sbjct: 624 AGHRNAVAAADAAAQALAHCRGEWQAESAQVPDDSRDPVALGEALRQAQAALAGLEQALA 683 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 RQ + + + +Q A+ L A A AL F D +A A Sbjct: 684 TAQAAERQAAAEAAGAQAALVSARQSQAQVAERLASADAALAHALAQHGFADARAHADAC 743 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 +D+ + L+ + + +Q A + ++ ++ ++ LA Sbjct: 744 LDDDAMQALDATLRTFD----------SQLAAAADRRERAEAAAQALDAPDLDGLRAALA 793 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 + + + Q E + +Q+ Q L ++ + + G L + Sbjct: 794 ASAATVEDLVRQQAERGRSRDALLQCQQRLQQLDREGRDIEARFAVLGRLAEVANGNNPR 853 Query: 894 K--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVEVVDTWQAD 943 + F++F LD ++ A+ +L + GRY+LQR +++ L++EV D Sbjct: 854 RMTFQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVREQADQRSAGGLDIEVFDHDTG- 912 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 A R TLSGGE FL SL+LAL L+D+V + ++D+LF+DEGFGTLD E+LD AL Sbjct: 913 AARPANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGTLDPESLDFALRT 972 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L L +G+ +G+ISHV ++ERI V+++V+ +G L Sbjct: 973 LLDLQQAGRLVGIISHVTELRERIDVRLEVRPGSGGSRVVLSG 1015 >UniRef50_Q2B7M6 SbcC n=4 Tax=Bacillales RepID=Q2B7M6_9BACI Length = 1046 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 184/1076 (17%), Positives = 389/1076 (36%), Gaps = 72/1076 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L ++ G +IDF+ S +F I+G TGAGKTT+ D I A+Y + Sbjct: 1 MKPLKLAMQAFGPYAGTEEIDFSS--LGSKTMFVISGKTGAGKTTIFDGISYAIYGKASG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 + ++F ++ Y S + + + G R EL Sbjct: 59 EDRNGPELRSQFAENNLLTEVSLQFSLRDRTYYITRSPQQEKKKERGEGFTTIGARAELY 118 Query: 118 ---RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 + +LA V+D E + +D +F + +++ QG+F L + KE+ +L+ Sbjct: 119 MYDEKNEKVLLAANVRDVDEKIKEIMLIDSSQFRQILMIPQGEFRKLLTSDSKEKEVILQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQ------------ASGVTLLTPEQVQSLT 222 L TEIY +I + + R +EK + + E + + Sbjct: 179 RLFHTEIYKKIEEKLRTEATELRKSVEKQADRRNHLLHGIHASYQEDLIEALEEDTLNDS 238 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 L++L E + L + + + Q+ +A+ + LA++E+ + + Sbjct: 239 RILRLLEKEIELLNGEMDKLVYEGRKKQEERDSLQQKIYEAEAVLKQLAQKEELKAKKEE 298 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 L + + +A+ +A L + ++ + L S A + LQ Sbjct: 299 LESRKEWSEAKEQEIILAQKAAILEQQEELCHKLKSDLDSCKAEFERLEKSTEALYQLLQ 358 Query: 343 QQQQSLN---TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 Q++ + E + + + + + + +++L + Q + L Sbjct: 359 QKEAAYQHEKNREAERNESAEAVSRLQAMKEDVLALSKTKSEAEILKKRLDSSRQTIENL 418 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQ--HLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 A + L Q + + + + + Q + Sbjct: 419 EAGQKQWEETLKRLNAEKKEADGSLLQSVEMERKLEGSQSLLENINKYESQEQKLADSLE 478 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + + ++ + EQ+ +LQ G+ CP+CGS HP Sbjct: 479 KLEQQKQLLEKQQARAED-ARQLVAELEQKWLHGQAAILAGKLQDGEACPVCGSMEHPLP 537 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 + ++A KQ E + + Sbjct: 538 AVSGGPDFPD----------------------EKDIEAAKKQQLSCEEDRSKAESRYYEI 575 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 ++ S+ + + +P L + LLS+ ++ ++A ++ Q + Sbjct: 576 QSAATSLKESIAELAARVAEQKPGLSEDSITSYKQELLSESSRMESELAGFRRKAAQADR 635 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 ++ ++ + + ++ + + Q Sbjct: 636 LEQEIKRAESEKSRQADELRQAAADNQEAGILFAEKNTVLSRMMETVPENLRSRQAYEEE 695 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 L+ Q + + E+ ++ + + Q L + F Sbjct: 696 LQAAQQHQQKLTQRLEEAQAAYTDTREKHSNEKTRLEVAENQLKQTGDKLSAERELFRDR 755 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 + F Q + A +E+ L L+ ++ + R A + E L + Sbjct: 756 MVGQGFTVYQDYHHAKRNERELEGLQAELRSYREELRSAADRYHELTELLKDVK------ 809 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 ++ ++++ + + L + + +++ + ++ + + I + +Q Sbjct: 810 ----EPDIQALKEQFGEVDKLLAALQEQYTGLLVKKRENGEIHKKVTEINEDIKLLEEQY 865 Query: 878 EDWGYLNSLIGSKE--GDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS----- 929 G+L + + F ++ LD+++ AN +L ++ GRY L RK Sbjct: 866 HLLGHLFEISKGQNTFRITFERYVLAAFLDDILREANGRLGKMTSGRYRLLRKTDRSKGN 925 Query: 930 --EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 LE+ + D + R +TLSGGESF +L+LAL L+++V + ++++F+DE Sbjct: 926 VQSGLELLIFDQYTGQE-RHVKTLSGGESFKAALSLALGLAEVVQQYAGGVSLETMFIDE 984 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 GFGTLD E+LD A++AL + ++G+ +G+ISHV +KERI V+++V ++ Sbjct: 985 GFGTLDPESLDQAIEALIDIQSTGRLVGIISHVPELKERIDVRLEVTATQQGSRTE 1040 >UniRef50_B1YES7 SMC domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YES7_EXIS2 Length = 1002 Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 208/1060 (19%), Positives = 394/1060 (37%), Gaps = 74/1060 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+ E IDF +F I+G TGAGKTT+ DA+ ALY ET Sbjct: 1 MRPERLTLRAFGPFADEQTIDFR--ALGGRTMFVISGNTGAGKTTIFDALTFALYGETSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARN-QPDGNLQVPRVELARC 119 + + E+EF++KGE YR + + Sbjct: 59 GEREMSDLRSHFAKPEQKTEVELEFQLKGERYRIIRQPGQPHPVNKTDYGHEAELARHDG 118 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 K LA K+ + + L LD+ +F++ +LL Q +F L A+ K++ ++L++L T Sbjct: 119 TSWKPLALKIPEIRQQVQELLQLDHKQFSQILLLPQNKFRELLMAESKDKLQILKQLFKT 178 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E YG+ + + +++ + + P + A+ + + L+ Sbjct: 179 EHYGEFQQRLHRKALDLAATIKETKTKQLAKLEELPLDLNWSEATETTIRHQTDTLLATL 238 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 ++ + + + Q + + L+QA E+ L L Q P R Sbjct: 239 DEKIEQAKTVEQAGR--QTLEQLTERLRQAEQLEQTFTEYDQLLHLEQQLALTLPETMRQ 296 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 E A + I+ V QS + +EL+ QQ L+ + +R Sbjct: 297 KEQYDAASRAA-AIQGVYETFQSEEQTVRQLTGTKQTVESELEHLQQQLDQVNRTVERLT 355 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 E + Q + + L+ +Q + + A+A + ++ + Sbjct: 356 VQEPEMREASRRLEQIADELKRLQDQEQLIRQQQDLQRAVAQLNPDALREQRTRQRSDRT 415 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR--QRYKEKTQQL 477 + L + Q+R LQ Q + Q L + R K + +Q Sbjct: 416 RLQAEIARLSDDSSTRLSLQERRFVLQSIEQKQQEWQRNEAERLRLIEHGTRVKAEKEQA 475 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 T Q R + L G+ CP+CGS +HP + Sbjct: 476 ERTYTAGRQHERRQLAAELAGHLDDGEACPVCGSATHPQLAVKTEPLD------------ 523 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 ++A+ + ++ Q L+ + ++++ + + L Sbjct: 524 ---------------VEALHQAYLTAQSAHQELQATYRTVSERKRQLEHELATLADGQPV 568 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + E S+ + Q + QQ+ + +EQ + + + Sbjct: 569 PNDVTAIRTEINDLKNQESRLQQQQERKQQLEQQLRTIETALEQADRKIEEETDRQSKLQ 628 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 + E L + L +TL + T Sbjct: 629 LELARLEGILNRNPDAPSR---------------RDLETEQQTLTKRLAEFEAARTASQN 673 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 +++ + A + Q ++++ + +A+A +LQ F+ + F A M Q Sbjct: 674 QKQRLDQDIAARRGRLQHVEEELTIHMAKRTEAEAALARSLQEERFETVEQFEQARMSRQ 733 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + QL + + +R+ ++ + + + + Q + + ++ + Q Sbjct: 734 AMEQLAERLEADRRKRQDVESGLERIRQLILQQDR----------PDLAALRPVVRQAEA 783 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK--F 895 +L T + + ++ L QQI + G L + + + F Sbjct: 784 ELVTATDGRIGVEKERLHIKQLVDAWSGLQQQIEAEDARYGIIGELARVGVGENAQRMTF 843 Query: 896 RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEA-------LEVEVVDTWQADAVRD 947 + Q D ++ AN+ L + GR+LL+RK L++ V D + + R Sbjct: 844 ETYVQTAYFDEILQAANRHLHGMTSGRFLLERKTEAGKGLKKYGLDLNVFDAYTS-QTRH 902 Query: 948 TRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +TLSGGESF SLALAL LS++V S ++++F+DEGFGTLD E+L+ A++ L ++ Sbjct: 903 VKTLSGGESFKASLALALGLSEVVQEASGGVSLETMFIDEGFGTLDPESLEQAIETLLSI 962 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 ASG+ +G+ISHV+ +K R+ +I+V + +L Sbjct: 963 QASGRMVGIISHVQELKSRVDAKIEVTQGKTGSTIRLVVE 1002 >UniRef50_A0JY32 SMC domain protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0JY32_ARTS2 Length = 1023 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 217/1085 (20%), Positives = 380/1085 (35%), Gaps = 110/1085 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I L + G IDF R +++GLF + G TGAGKT++LDAIC ALY P Sbjct: 1 MRIHRLEISAFGPFAGTEHIDFDR--LSAHGLFLLNGATGAGKTSVLDAICFALYGSVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG----NLQVPRVEL 116 + AE EF KG + R G Q L Sbjct: 59 ARQEGKRLRSDHADAAAEPRVTCEFSAKGRHFEVSRIPAWNRPSARGRNGFTEQKANTLL 118 Query: 117 ARCADGKIL--ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 DG+ + + + + +++ G+D +FTR ++L QG FAAFL +KP ER ELL+ Sbjct: 119 RERVDGQWIEKSGRNDEAGAEISSVLGMDREQFTRVVMLPQGDFAAFLRSKPAERLELLQ 178 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L GTE + + + + AR ++ L +Q + +V L + + Sbjct: 179 SLFGTERFEAVEQELARRAADARAQVASLNSQLDLLLAQARSEVTPPEQELPDVPAAPED 238 Query: 235 LITAQQQEQ-QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + Q + EA+ + + L E + L+ A+ R+ Sbjct: 239 ADLLLEWLQDTAAARAVTAHAEADEAAAGRAGAARRLEAAEAHAARQVKLAAAERRRSAA 298 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 A + ++ E + +LQ+ + A +A + + + ++ + Sbjct: 299 DAAAPELRDKARQLGLHRKAEVLGGQLQALDKADIAEERAARAMAAAVDELRAAVLVDAE 358 Query: 354 EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA---------AITL 404 E F R L + + E++L A A Sbjct: 359 LAALSAYARQESGSADEHFFDAAVVRSELSRLRSLRAVLEERLPDEARLSGMVARGAELR 418 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT----------- 453 + A A LR L + P ++ A+ Q+ + Sbjct: 419 KTLTELRERRRAGAAALEGLRAEAAELLAGVKPLEELAAEAQLRTKEAAAAEELVAVVGR 478 Query: 454 -QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST 512 + ++ + E + ++ Q +E +QL+ +PCP+CGS Sbjct: 479 HAAAVRVSSGVAERHRLARDDHQNHRQRWLDLREERLANAAAELASQLRPTEPCPVCGSP 538 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ 572 HP+ V + A E + E +L + Sbjct: 539 EHPSPAPAATAALAVADAERAAQEAC----------------------EAAEAVLAALGK 576 Query: 573 DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQI 632 + Q + A + Sbjct: 577 ELAEARQLVAVLAAQGGDLP--------------------------------LEEARADA 604 Query: 633 IQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 Q +++ ++ + ++ ++ + + + ++ L + + Sbjct: 605 AQAKERADEAVRAAADLAASRERQAELDEHIDAAESAQAAADSGMAKTESTLMEVLEQTD 664 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 L L L + + E+ AL + + A + A+ Sbjct: 665 ALDDALGKLRAGYPTLGSRLSSLDES--------TALLERTDAARSGLEQAGLRTRDARQ 716 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 Q D AL S F+ A + L+ LE + +++ + L LA + Sbjct: 717 QLDKALPESGFESAAAARSVLLPVPEAAMLEAAIRAGQDEEARVGELFASEELILATRE- 775 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 DDG +EQ++ E A + R+ + G + + + L Sbjct: 776 -LEDDGPVEASVLEQLRAEDAAAERMARQAVVAAGLAEKSVLTLRRIAEDYGRLAASGQG 834 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFR----KFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-- 925 ++ + + +R + L+ + A+++L + GRY LQ Sbjct: 835 PRERAALLTAVAEAARGAGDNTYRMSLNSYVLAARLEQVAIAASERLVGMSDGRYTLQHT 894 Query: 926 -----RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRI 977 R A L +EVVD W RDT TLSGGESF+ SLALAL L+D+V S I Sbjct: 895 DAKAARGAKSGLGLEVVDQWTG-HRRDTATLSGGESFMASLALALGLADVVQQESGGVDI 953 Query: 978 DSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 ++LF+DEGFG+LD + L+ +DAL+ L G+ +G++SHV MK+RI Q++V K Sbjct: 954 ETLFVDEGFGSLDEQALEQVMDALEGLRDGGRVVGLVSHVPEMKQRISTQLQVVKGRNGS 1013 Query: 1038 YSKLE 1042 + Sbjct: 1014 TLHIS 1018 >UniRef50_C6I6N0 ATP-dependent exonuclease SbcC n=5 Tax=Bacteroides RepID=C6I6N0_9BACE Length = 987 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 265/1054 (25%), Positives = 467/1054 (44%), Gaps = 93/1054 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL S++G ++IDF EP S G+FAI+GPTGAGK+T+LDA+CLALY +TPR Sbjct: 1 MKILTIRLKNLASIEGTFEIDFQAEPLRSAGIFAISGPTGAGKSTILDALCLALYDKTPR 60 Query: 61 LSNVSQSQ---------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQ 104 S +S +++ R T E AEV+F G YR+ WS R ++ Sbjct: 61 FSASVESLYMSDIGESRVNQADVKNILRRGTGEGFAEVDFLGASGHCYRSRWSVRRTGSR 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 +G L+ +++ + L K+ L TL GL Y +FTR++LL+Q FA FL + Sbjct: 121 ANGALRSQTIQVTDLTANQELQGTRKELLAQLVTLVGLTYEQFTRTVLLAQNDFATFLKS 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 + +AELLE+LTGTEIY +IS+ ++ + K+A EL +L++ A+ + LL+ E++ L Sbjct: 181 RESAKAELLEKLTGTEIYSRISSEIYLRSKTADAELNQLKSNATLIELLSEEEITLLRTE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 + LT+ +Q A L+ L Q++ ++ Q ++ + +K + + Sbjct: 241 KESLTNLREQGSKALIDLNAQLSVLHTLKLQQEQRDKKVQDMRLDEEKSKKLREEYTR-- 298 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + R E + + + QI+ + ++ + + Q+ +LQ Sbjct: 299 QSDSLIRFRGQCEAVQPDLSRARELDVQIQSLVSQSKQVEEILQGAEKAVNAQANKLQSV 358 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 Q +L+T E S R L++ + QL ++K A Sbjct: 359 QGALHTSCHSLKNLTGEI-ELPVTEETGLFLESVRNRLKEQEDQLAILQEKNEARVNRLN 417 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + V A+ +++ Q+ + +L+ + + +Q Q + Sbjct: 418 AFGIEAVTDEQARWMQEQTRLQNARQQMLEWRKAGTEAERLKAQQEEMGHKQEQMRKEIT 477 Query: 465 EMRQRYKEKTQQLADVKTICEQEARI--KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 + R EK +L ++ + E K + R L+ +PCP+CG T HP Sbjct: 478 LLTTRLSEKEAELKVLQRLFENARIAMGKDVRTLRQNLRENEPCPVCGGTDHPY------ 531 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 NE + + + + + + Q+ N +L+QD L++ Sbjct: 532 -------------RNEEQVVHSLYQNIEQEYQTASAEYQQLNNRNIALKQDLLHLSELSG 578 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 +T L LQ +++ + + + ++ + Sbjct: 579 EITVQLQAFLQE---------------------AEQKRPSSEEEQNPDYFEKQLHTVQGK 617 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 LL + Y + + E + T + ++ ++ L ++ E L Sbjct: 618 LNLLAEKMHQYHQLYKEWQQHEGQIRTARSACEALREGVARCHLLMQQVLAAKEQFELLK 677 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 ++ + VV E + ++ L + A +++K + Q + +++ Sbjct: 678 TAETTAREQFRVVSEQLITLRQERAPLLK-----GKSVEDAEAAIRKKEKQLNDSVEQVR 732 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + ++ + + QL L ++ Q Sbjct: 733 KEGEEVQSRISGMQGEIRQLNSSIDELMLRKEQI-------------------------- 766 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 E + + +A+ +E + +L Q NR++ + L Q++ + + WG Sbjct: 767 ADPEHLPETIARRQATNQETERRLSTVEARLLQQEQNRKKLKQLEQELTEKQETANRWGK 826 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 LN LIGS +G KF+ AQ TL+ L+ AN+ L+ L RY LQ+ L ++V+D Sbjct: 827 LNKLIGSADGTKFKVIAQSYTLNLLLMHANKHLSYLSKRYRLQQVP-GTLALQVIDCDMC 885 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 D VR +LSGGESFL+SLALAL LS L S+ +++SLF+DEGFG+LD+++L T ++AL+ Sbjct: 886 DEVRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSLDADSLRTVMEALE 945 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 L G+ IGVISHV+ M ERI VQ+++ + Sbjct: 946 QLQMQGRKIGVISHVQEMSERIAVQVQLHRAANG 979 >UniRef50_A3WLJ3 Exonuclease SbcC, putative n=1 Tax=Idiomarina baltica OS145 RepID=A3WLJ3_9GAMM Length = 1022 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 239/1075 (22%), Positives = 414/1075 (38%), Gaps = 87/1075 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+++ + I+FT + LF I G TGAGKTTLLDAI ALY ET Sbjct: 1 MKPLVLKMQAFGPFPTQQSINFT--LLGEHPLFLINGATGAGKTTLLDAISFALYGETTG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 + + D E F V + YR + GN +V R A Sbjct: 59 QDRIGKQMRCDHAADDCATEVEFIFAVGEKTYRVMRQPTQHILGQRGNSKVERRTTASLY 118 Query: 120 ---------------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 + KV + + TL GL +F + ++L QG+F LNA Sbjct: 119 QLQGEWSNDQLPNAMDWQPLETRKVTEVNKHIETLLGLRAEQFRQVVVLPQGKFRELLNA 178 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-EQVQSLTA 223 ER +L +L T+ + + + +Q + E+L+ Q + + + E + L Sbjct: 179 DANERETILSQLFQTQRFKRYEELFKQQASELKKSFEQLEQQKAHILDGSECEDLTQLEQ 238 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L + + T Q QQ +N Q + Q + + + LQ A +++ + + A + Sbjct: 239 HIADLKPQLEAKQTVLNQLQQQINDTDYQLKQQHTRNAKYKDLQHAKHQQDALKAKQADI 298 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q R+ + ++ + + LQ+ Sbjct: 299 DYKQQQIKAAQAAIRLLPTYNEWQQNEKHVKTSQEKQLQLETRQQQQAKTLKVAQTSLQE 358 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + T L+++ R Q + + Q Q +L E++ L A Sbjct: 359 AK----TKLEQNHSLRTTLQRLEELLPTVEQLEGLTKQVEQHQSKLALQEKEGKQLRASY 414 Query: 404 LTLTADEVATALAQHAEQRPLRQ--HLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + D Q Q + + L + Q+K+L + Q + T + + Sbjct: 415 DAVQLDIKRLRSEQLQVQSKIDELPELEVRVQALSEQRKQLLKKQQLTEQATTVKNDQAK 474 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + +R +K + + EQ +QL+ QPCP+CGS HPA Sbjct: 475 LQHALEKRLDDKQKAYNRANEL-EQRWLASQAPLLASQLKPQQPCPVCGSKQHPAPAQSD 533 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 V+Q L + + + L + ++ + +AL +Q Sbjct: 534 TTAL-VSQHELEHARATYRAAEQAFYDEQTALTKANEHERQLNQQLSEFTDLSEALIEQ- 591 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + +E + LL++R LQ ++ QQ + + Q+EQ Sbjct: 592 ------------------QEVQLNEERRTRAELLTRRQTLQSKLDQAEQQRSELEHQLEQ 633 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + +A + Q WQQ + ++ RI Q+ L L Sbjct: 634 CRAKYTEVKAQHARVNADLEHLN----------QRWQQSDINVAEVKPRIDQIKQQLRQL 683 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + E E + H Q A + + L AQ+L+ A+ + L +S Sbjct: 684 EKQFEQAQHAMQQQSEQYHATHTQLKAEVEENKRL-------AQALEAAEKAWQAQLASS 736 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F F +A + E L QL + + ++++ + + Q Sbjct: 737 PFATYNEFQSAHVSEPELEQLNSAVAEHNQRMVELRSMIAELQRYVDDIQ---------- 786 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 EQ+ L + + T + + L + Q+ + L Q ++ + + G Sbjct: 787 PADTEQLTLRLEKLRKDFESEQTQFNQQQSALFNNEKAAQRLRQLATQNKELEAKYANIG 846 Query: 882 YLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRL-HGRYLLQR-------KASEA 931 L +L + + +F + LD+++ +A+Q L ++ H RYLL R +++ Sbjct: 847 TLANLTNGQNDQRLSLHRFILSVLLDDILIVASQHLAQMTHHRYLLVRENEVNDARSASG 906 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L + V D + R T+TLSGGESF +LALAL LS++V S ++D LF+DEGFG+ Sbjct: 907 LNLAVTDAYTG-IQRSTKTLSGGESFQAALALALGLSEVVQQYSGGIKLDMLFVDEGFGS 965 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD + LD A+D L L ASG+++G+ISHV +KERI ++I V K + Sbjct: 966 LDEQALDAAIDVLANLRASGRSVGIISHVRELKERIDMRIDVHKGQYGSHITTRV 1020 >UniRef50_A6LCR2 ATP-dependent exonuclease sbcC n=6 Tax=Bacteroidales RepID=A6LCR2_PARD8 Length = 993 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 284/1053 (26%), Positives = 451/1053 (42%), Gaps = 84/1053 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++L++R +NL SL+GE+ IDFT EP AS G+FAI+GPTGAGK+TLLDA+CLAL+ TPR Sbjct: 1 MRVLAIRGRNLASLEGEFSIDFTEEPLASAGIFAISGPTGAGKSTLLDAMCLALFSRTPR 60 Query: 61 LSNVSQS----------------QNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNRARN 103 ++ L+ R TA AEV+F + G YRA WS +RAR Sbjct: 61 TELAKENNVRLRDVQEDVLPQSDPRFLLRRGTASGYAEVDFVALNGCRYRARWSVSRARE 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + G LQ R+ L GK KD L GL + +FTRS+LL+Q F+ FL Sbjct: 121 KESGRLQAARLTLYNIDAGKEEPGTNKDLQARIIELIGLTFDQFTRSVLLAQNDFSTFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A+ E+A LLE+LTGTE Y +IS +F ++ A+ E+L A+ + LL+ E+V++ Sbjct: 181 AEQGEKASLLEKLTGTEQYSEISRRIFAKNAEAKEAYEQLYARVQDIELLSEEEVEASQT 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 L L E +L A+ + +QSL + E+Q + +Q+ E A + + Sbjct: 241 RLSALEVELARLEKARAE-RQSLREAVKAAEVQIASKEKQREENARFLERALASLETSRK 299 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q L E L QQ +++ +L+S + R+ S Q+ Sbjct: 300 EYEQGEVRLARTDEESKGLRLEL----QQARKLDVQLESALKARSEADERMKDFSRRKQE 355 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 ++ L + + + ++ WR ++ + E L L A+ Sbjct: 356 AEEKLRKVEERQKKASEEWDKLTSWRERYRSKEGIAEQLSALLIHLDTCLTARRAVERSD 415 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 L A ++ LR+ + V ++ + +A+Q + E Sbjct: 416 KALLAIRQK-IQRLEVRRQSLRREAETHAKEQVKIEEERKSVALALQELEPE-------- 466 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 + + + + + Q +++ R +L AG PCP+CGS HP Sbjct: 467 -ALDRSIETCRTERERLLLEQAQFVTTGDIKSLRDKLTAGTPCPVCGSLEHPFASHEAHE 525 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 R+ +K+L + + Q++ + L DE A T+ Sbjct: 526 RLLALADRISEATLRLKRLLDRKERQEACGKQLAALQQKELELHKQLAADENARTE---- 581 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 L +Q L QI + Q+++ Q Sbjct: 582 ------------------------------LRNQLQSLSEQIDREELDKREQQEKLSQSL 611 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 A + ES+ T A+ WQ L L+ E+ Sbjct: 612 SAANALFGNDAWQTGWNKDPESFRETLTDFARQWQANGERLRELERERSAHQAERESYEA 671 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + + ++ L S++ L + + + Sbjct: 672 FLPPLRKQYEDAAKAYDEKNQSYTRLRSERNLLLGGQPADQVE-RTFHERVEALKSHLKQ 730 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + A EQ EQ+K++L + + +Q++ Sbjct: 731 LQESTTRHAGEVEQYRGGTEQIKKDLAETSGLLSARRQELDNWMVAYQENSEG------- 783 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 + L E T + E +L+ +N+++ Q++++ E W L Sbjct: 784 ---------KTLEESLSEMTAQKSECSFRLRTHEENKRKIAGFQQELSERRAMSERWAKL 834 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 N L GS +G KFR+ AQG TLD L+ AN QL +L RY L+R + L ++V+D D Sbjct: 835 NELAGSADGAKFRRIAQGYTLDVLLSYANVQLRQLSRRYRLERVP-DTLALQVIDQDMCD 893 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +R +LSGGESFLVSLALAL LS L S++ +++SLF+DEGFG+LD+ETL A+DAL++ Sbjct: 894 EIRTVHSLSGGESFLVSLALALGLSSLSSNRMKVESLFIDEGFGSLDAETLRVAMDALES 953 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 L G+ IGVISHV+ M ERIPVQI+V + Sbjct: 954 LRTQGRKIGVISHVQEMTERIPVQIRVNRAGNG 986 >UniRef50_C7TAC3 DNA repair ATPase n=8 Tax=Lactobacillus RepID=C7TAC3_LACRG Length = 1043 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 210/1073 (19%), Positives = 389/1073 (36%), Gaps = 60/1073 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ L ++ E E F + LF I+GPTG+GKTT+ DA+ ALY ET Sbjct: 1 MKLKQLHMQFFGPYADETV---NFEDFRTTPLFLISGPTGSGKTTIFDALVYALYGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-----VE 115 + F+ G+ YR + + + G+ + Sbjct: 58 -ERDGMQMRSNFASHHDLTKITLTFDHDGKHYRVVRQPQQIQQKKRGDGLTEVKAKAILA 116 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +A K + LD +F + +LL QG F FL+A + +LL + Sbjct: 117 IADADKQVAEYTKKNQVQSQLDAILHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRD 176 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP-----EQVQSLTASLQVLTD 230 L GT++ + + Q K ++ + + +T ++ L ++ Sbjct: 177 LFGTQLIQRWQTAMQAQTKQQGAAIQDQERMLNLLTSQFEFATPPSDNATMADKLALMRQ 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 E Q T Q + + + Q A + + L QA + ++ LA L+ + + Sbjct: 237 EVTQQATTVTNLQTMADQRHQCYQTAQTALQTGKQLAQAFEDRKQTAAALAQLAEQKQTQ 296 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 R Q+++ L + + Q Q LN Sbjct: 297 QDRLKLMERLTWVQEHEAAEQRVQRAARDLTIAKTQLVQTQTAMKTAQQAMDQAQTKLND 356 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 Q+ + ++ Q + + +Q QQ Q A L D+ Sbjct: 357 LQQQDSAIEAKKTQLDQLQSVKQQLVAIADQEKQVAQQTAAVAQAEAASVQAQKKLANDQ 416 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 Q + L L + Q+ E Q + L + + Sbjct: 417 KKLDQYQTELNQLAVSDLADRAADHKQLVAALKPVAANYQDAHAEAEQLASKLTDTKTLL 476 Query: 471 KEK---TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 + +Q +Q + + A+L G PCP+CGS HP EP V Sbjct: 477 IQATNVSQSAEQQLNQLQQTQIRQQIAQLAAKLTPGTPCPVCGSVEHPHPA-VALDEPLV 535 Query: 528 NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS 587 ++ + ++ + TL+ Q+ + +Q + ++ A W V++S Sbjct: 536 TEAEVKQATQARQQAAAKETTLQAQVSNLEEQHAA------ATKKSNVAKNSFWAQVSSS 589 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 ++ + E+ + Q + A + I Q + Q + Sbjct: 590 IDAVSPQSEQSDVLKQLAILEEKAQAAVQALSAAQIRQDALKKAITVGQTVVSADDQEIQ 649 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 T + + + S L T + L A ++ +T L ++ + Sbjct: 650 ATQSALNTAKIEAAKANSVLTT----------MKASLPAGTTDLKTVTEQSHVLTEAIKT 699 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD-Q 766 + + Q LH+ ++ Q + Q+A+ F +A+ D Sbjct: 700 YQEQLKTAQRQLSEFDRQLAGLHADERHATDQIATLKKEHQEAEDGFLSAVTDYFGSDGV 759 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 F A L L+Q Q ++ + QTL+ +T+ G ++ Sbjct: 760 AKFAAMREQLGQLPLLQQQTQRYKDDVLKQQTLLAAANKTI----------GNQPQPALD 809 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 Q++ + + + + T+ E +Q+ +Q ++ D L ++ Sbjct: 810 QLEAQASAAEAEATKAQTAFIEAKQKHDTAQKLLEQAADILAANQTALAAYADLQTLTAV 869 Query: 887 IGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-------EALEVEV 936 + K ++ L +++ +AN +L L RY LE++V Sbjct: 870 MNGNGPKKLSLERYVLQAYLQDVLDVANTRLQVLSNQRYQFVLHTDLGTQKIHSGLEIDV 929 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSET 993 D Q R +TLSGGESF+ +L+LALAL +++ S ID+LF+DEGFG+LD+ + Sbjct: 930 YD-DQVGERRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEGFGSLDTNS 988 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 LD A++AL++L + IG+ISHV +++ IP Q++V+ G G S+++ Sbjct: 989 LDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVQPA-GTGRSRIKVMHM 1040 >UniRef50_UPI0001B5666E putative ATP-dependent dsDNA exonuclease n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5666E Length = 987 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 203/1062 (19%), Positives = 372/1062 (35%), Gaps = 97/1062 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L ++ G +DF ++GLF + G TGAGKTTLLDAI AL+ P Sbjct: 1 MRLHLLEVEAFGPYAGREVVDFD--ALGTDGLFLLHGDTGAGKTTLLDAIAFALFGVVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + + +E V+G+ R S R + G Q RV L Sbjct: 59 ARGDVKRLRCDLAEPDRQTEVVLELTVQGQRLRIVRSPEYQRPKKRGDGFTTQQARVSLT 118 Query: 118 RCADGKILAD-----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 + ++ + L G+ +F + +LL QG+FA FL + ER +L Sbjct: 119 WVGEPPAGLPPDGSIRIDEVARTVERLLGMTAPQFFQVVLLPQGEFAKFLRSDTTEREKL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 LE L GTE + + + LEK Q + + ++ Q E Sbjct: 179 LERLFGTERFSDVERWFADLRAERGRALEKRQQEVRELLARYAQEAQQEPPEDGQPEWVE 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 L + + + + + A + ++ + + + L+ Sbjct: 239 AVLTEVAARAEAAETEAAQARSAAKSAEVALREAEEDAEKIRRVRTAHTRLTQVAEQAAE 298 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE-LQQQQQSLNTW 351 R W + A + + E ++ R + + + S+ Sbjct: 299 RAEWTEEIAAARRAAAVVPETELMDRRTGELGDAQVLVADRIRDLADLGFDAVGLSVADL 358 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + R+ A A+ +QQ SD + + ++ +A +++ LA L Sbjct: 359 RERAGSVREEAGALAELAAEANQQKSDEQRRAERRKVAENAAEQVAGLAERLAEL----- 413 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 LA + + A + + L L A + + + + ++R+ Sbjct: 414 PGLLAAARSEATVAGEAAAKLDGAKSRVEELTALTRAAEELPPAEARVARGEAKLREVVD 473 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 E Q + + A L G CP+CGS HPA + A + R Sbjct: 474 E-HQAARQRRLDLRERRLDGMAAELAAGLADGTACPVCGSAEHPAPANHDAPLVDAAEER 532 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 + + L ++ Sbjct: 533 AAEEAEQTAAALRQRVV--SALGEAKARVVSLRERLDG---------------------- 568 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + A E + LS + + + Q+ A ++ + +Q+ ++++L Sbjct: 569 ----RTAEEIATALTEARTVVSELSGKAQRKDQLNAKVAELERGAEQVAEQRRL------ 618 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCE 711 E + + Q + E + R Q L L + E Sbjct: 619 AEQTVTEATSEIRALDERMAEREQRLAAGRGEFPDVPARRQHLLTFAGALDLAAEAHAA- 677 Query: 712 ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLA 771 A L + + + +L A F + A Sbjct: 678 ----------------------------VSGAEARLAEQRDLVEISLHAKGFSTLEEMRA 709 Query: 772 ALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQE 831 A+ ++ +T+LEQ + A+ ++ Q + PDD + + E+ ++ Sbjct: 710 AVRTDEQITKLEQGLAEADAMAAGAREMLAQP-----ELFGISPDDTVDVAPLAERAKET 764 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 A+ + R+ +K + L + + +N + Sbjct: 765 RARAETAFAAQQAVSAQHRELVKLAGRLSKALSELEPLEEEYAELRALSEVVNGRGQNAR 824 Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTWQAD 943 R + L+ + A +L + GRY R L ++V+D + Sbjct: 825 KMSLRSYVLAARLEEVALAATARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSG- 883 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSH---KTRIDSLFLDEGFGTLDSETLDTALDA 1000 VR +TLSGGESFL SL+LAL L+D+V+ +D+LF+DEGFGTLD+ETLD ++ Sbjct: 884 TVRPAKTLSGGESFLASLSLALGLADVVAGETGGALLDTLFVDEGFGTLDAETLDVVMNI 943 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 LD L A G+ +G++SHVE +++RIP +++V+K +L+ Sbjct: 944 LDELRAGGRVVGLVSHVEELRQRIPTRLRVRKSRTGSRVELQ 985 >UniRef50_Q49XE1 Nuclease sbcCD subunit C n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=SBCC_STAS1 Length = 1009 Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 190/1072 (17%), Positives = 405/1072 (37%), Gaps = 91/1072 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L N E IDF +N LF I+G TG+GKT + DAI AL+ E Sbjct: 1 MRPIKLNLTNFGPFLNET-IDFNNVE--NNQLFLISGKTGSGKTMIFDAIVFALFGEAST 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR-NQPDGNLQVPRVELARC 119 + E EF+++ + ++ + + L V Sbjct: 58 KDRKESDLRSHFAESKKPMVVEFEFKLRNQYFKIQRQGAFIKEGNKNKTLGQLAVYQYEQ 117 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D + K+ + L G++ +F + +L QG+F FL +K E+ ++L L + Sbjct: 118 DDYALRESKINSGNQFIKALLGVNAEQFRQLFILPQGEFKRFLLSKSVEKQDILRTLFNS 177 Query: 180 EIYGQISAMVFEQHKSARTELE----KLQAQASGVTLLTPEQV-QSLTASLQVLTDEEKQ 234 + + +I + + K R ++E L+ + E + + S + + K Sbjct: 178 QRFEEIQKKLSDDVKEVREQIEKRYNDLENHWKELETFDDETLCEHKVISARQTNNIIKV 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L + + Q + ++ E+ + + + E A +L Q L Sbjct: 238 LPDFKMKAQIIRDDFEQKKEILKNKVNSTENALNNNIKLEDALNKLN--ENQQKYEALLV 295 Query: 295 HWERIAEHSAALAHIRQQ--IEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + I E + I + I + ++T++ + + ++S + + + Sbjct: 296 NENEIQEKVKRVTEINEVRPITNLLEVKENTISKKGKVAQSIEEKSKSIFDLEDKIKQSN 355 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA--DE 410 E D ++ ++ R Q E +++ + + A + LT +E Sbjct: 356 LEADNLKEKQDDIEELRRFIEQTQLFFEKANKYKDAYNNYQFTKTAFTDLEAHLTQKNEE 415 Query: 411 VATALAQHAEQRPLRQHLVALHGQI------VPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + A+ +++P + + + I + Q K+ + ++ + + + Q+ L Sbjct: 416 IKDTTAKLNQRQPDYRKIEQITEAIYNLNNDIKQLKQNEKDKIEYDALEKRKMQKQRNLK 475 Query: 465 EMRQRYKEKTQQLADV-KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 ++ Q+ + ++ ++ K+ + + + +A L G+ CP+CG+ H Sbjct: 476 DLSQKRVQLNEEYNNIDKSKLDLNNKQDVIATVQAALHTGETCPICGNEIHTLSSHVDFD 535 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 E +L LE ++ + + +L I +Q Sbjct: 536 EIMERHQQLTLLEEKIATVKGDIIKCESELSHIEEQ------------------------ 571 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 L+ + + +DE E++ + + E +I Q+ QY++ Q Sbjct: 572 ----LSKYTIASLENINYEALEDEVEKKYQEKKKIDEENNEIEKLKDQLQQYEKSSHDLQ 627 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + ++ E+ + + + N+I+Q L + Q Sbjct: 628 MNIQKKEHILKENETAINDFEN-----TTGYKRVDEFLTKFEDAYNQIRQFDQTLNEIEQ 682 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + + + ++ + + + +Q F Sbjct: 683 KIQNYKSTLAIEKNSVTYLKNNLAEIETEI--------------NETDMKINEEMQRIGF 728 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + LE+ + + +++ + + Q + Sbjct: 729 TSIEQVEKVTAQASEKQNLEKEIETFKKEKQSYELYIAQLKAETNNKKL----------D 778 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 +Q+++ + Q +T + +++ ++ + ++ ++ Q ++ L Sbjct: 779 DTQQLKERFEEMQQVYETASTELSQHDYKMEFNSKKITEINKIIDELNSELQSQQEVFQL 838 Query: 884 NSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-----EALEVE 935 ++ K K + L+ ++ ANQ+L + G RY L R+A LE++ Sbjct: 839 AEILAGKNEQKLTLENYVLIYYLERILTQANQRLAIMTGQRYQLTRRAQISQGYSGLEID 898 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 V D ++ R +LSGGE+F SLALAL LS++V S +DS+F+DEGFGTLD E Sbjct: 899 VFDAH-SNQSRHITSLSGGETFQASLALALGLSEIVQQESGGISLDSMFVDEGFGTLDQE 957 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 TL+TALD L +L ++G+ +G+ISHV +K+RIP+ ++V + + Sbjct: 958 TLETALDTLLSLKSTGRMVGIISHVSELKQRIPLILEVTTEQYQSTTHFKKQ 1009 >UniRef50_B5CKX6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CKX6_9FIRM Length = 1083 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 214/1088 (19%), Positives = 421/1088 (38%), Gaps = 75/1088 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + G +IDFT+ G++ ITG TGAGKTT+ DAI ALY E Sbjct: 9 MKPEKLVISAFGPYAGRTEIDFTK--LGGQGIYLITGDTGAGKTTIFDAITFALYGEASG 66 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S + E E F +G++Y+ + + G R A Sbjct: 67 QVRDSAMFRSKYAAEEIETYVEFLFSWRGKSYQVIRNPEYLARKKRGTGYTVRKSDATLV 126 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D ++ K K+ L GLDY +FT+ +++QG F L A +R E+ +L Sbjct: 127 YPDERLPVTKAKEVTRAVTELLGLDYRQFTQIAMIAQGDFQKLLLAGTAQRGEIFRQLFH 186 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVT--LLTPEQVQSLTASLQVLTD------ 230 TE+Y + + + K + ++L+ S + ++ + LT L+ + Sbjct: 187 TELYQSLQLKLKDAVKMQWKQYDELRRSISQYLNGIRYGQEAEELTEKLEEMKKSGFDGR 246 Query: 231 --------------EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA 276 E++ L+ +Q+E+ ++ ++ Q+ ++Q+ +EE+ Sbjct: 247 VVEGLELLLELTEREKEFLMQLEQKEKVLEESISESEKRLQKCMQKQELESSLRLQEEQR 306 Query: 277 QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAK 336 +P L A A+ R P +R AE ++ E R+++ + K Sbjct: 307 EPLLQAAGKAEEERKKNPELQRKAEELEGEIRKIRERMERILRIETLGQKAEKLGEELEK 366 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 + Q+ +E DRF + Q + + L + +K Sbjct: 367 VQKKCQEHTAQKEQLQRELDRFGALEAVREKYCGQLANLQEQADRLESAKDAYGTRMKKE 426 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQ-----HLVALHGQIVPQQKRLAQLQVAIQN 451 AL L + + + + Q + Sbjct: 427 AALTEKMRQLQEELDNRKEMLKKMGEEIEKSGDAGEIRLSLYQKKNNLTVQLNQAERLIE 486 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPL 508 +EQ+ L RY + + VK E+E R+ L+ G CP+ Sbjct: 487 AKEEQSSLQKKLEFTTGRYLKARENYLPVKEAYEREFRLFLDTQAGILAEGLKEGMACPV 546 Query: 509 CGSTSHPAVEAYQALEPGVN-----QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 CGS HP + + E ++ E V+ +L+ QL+ + K+ ++ Sbjct: 547 CGSVHHPVLAEKCSEEISKESVDQKKAAADEAEKNVRNYSAMAGSLKEQLERLKKKAEQM 606 Query: 564 ENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQG 623 E +A +D + + ++ Q + ++++ + + E+ ++ Q+ Q Sbjct: 607 EKDAGYHLEDAEWVKERLQKEIRTCG------EELKKAEETLVQREKLVKAEEQKKAEQL 660 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNE 683 Q+ + + + + ++ L + ++++ +S + + Sbjct: 661 QVEQLLHEQEKKMAEAQAQKSSAREILCQILGKMEKDEKRKSDSLKDSEVQELTVSAMKR 720 Query: 684 LTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLA 743 L + I + +E Q E EE + Q E+ + L +++++++++ Sbjct: 721 LKSCTGEISEKKSAVEQEIQRREELKKEEGRLRAIVEQEKEKTVQLQAEKKSVEERIKE- 779 Query: 744 AQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 Q A+++ + L+ + Q+ + + +++ + ++ + Sbjct: 780 EQEKNGAESEREEILKEQILQKQEEQKKLKALQ-------------QKNQQEYEQILQKK 826 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 AE A Q R V E+I +E ++ ++ + + E+ + + + + Sbjct: 827 AENEATIQTIRVQLEQLEDVNEEEILKEKSRMTEEKSQMAEEKKELYVRYSGNREIYDKV 886 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIG----SKEGDKFRKFAQGLTLDNLVHLANQQLTRL- 918 + ++ ++ L G K+ + + Q D ++ AN + + Sbjct: 887 NVQRDLLEEVEKKYVWMKSLADTAGGNLNGKQKVELETYIQMAYFDRILRRANLRFMTMS 946 Query: 919 HGRYLLQR-------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 G+Y L+R K LE+ V+D + R +TLSGGESF SL+LAL LSD + Sbjct: 947 SGQYELKRQKAPEDKKGKSGLELNVIDHYNGSE-RSVKTLSGGESFQASLSLALGLSDEI 1005 Query: 972 ---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 + ++++F+DEGFG+LD E L+ A+ AL L +++G+ISHV +KERI +I Sbjct: 1006 QANAGGICLEAMFVDEGFGSLDEEALEQAIKALGNLTQGNRSVGIISHVAELKERIENKI 1065 Query: 1029 KVKKINGL 1036 V K G Sbjct: 1066 IVTKERGG 1073 >UniRef50_C4V2E3 Exonuclease Sbcc n=2 Tax=Selenomonas RepID=C4V2E3_9FIRM Length = 1026 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 222/1065 (20%), Positives = 408/1065 (38%), Gaps = 77/1065 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR++ S E +DF A I G TG+GKTT+LDAI ALY E+ Sbjct: 1 MRPLKLRIQAFGSYVDEQILDF-ETALADAPFLLIHGVTGSGKTTILDAIVFALYGESSG 59 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR-NQPDGNLQVPRVELARC 119 E F + YR S R ++ + +L R Sbjct: 60 DIREGAMLRSSTASPDRTTEVEYVFALGQRRYRVLRSPAYFRMSRGKMTRRAATGQLFRL 119 Query: 120 ------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + K+LA + D E + L G D +F + +LL QGQF FL A+ K+R+ ++ Sbjct: 120 PNVGKTGEEKLLAANITDVSERISQLIGFDADQFRQVVLLPQGQFQRFLLAEVKDRSAIM 179 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 + + TE Y +I ++ ++ + + + +A G+ AS L Sbjct: 180 QRIFRTERYQRIEEVLTKEAQQLERTAQAERERAEGIL------RAEGMASSDELRTRLS 233 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA-ALSLAQPARNL 292 +L +++ + L + + + A A QQ L+ + AQ L A+ RN Sbjct: 234 ELSEEIRRQDEILREHEKVQKSARRAREEGAAAQQKLSARDAAQSDLEKKREQAESVRNF 293 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ--QSLNT 350 R R L R IE +NT A ++ + AA ++ + + + Sbjct: 294 RVRLSRAQRAQPVLYKERSYIEALNTERTRREAYASAAKDCAAAKTEHDASIECLKKVEA 353 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 EH + + + ++ LR + + E+K + AA LT + Sbjct: 354 HADEHTQNVEQLRRMRDYAPLANRYQECTSALRDLRVRAAEGEEKYESGAAEIERLTEAQ 413 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + + L + Q Q + Q I+ + T + + +++ Sbjct: 414 KKYEEERARLHQILVG--SEIVQQEKKQLEHCQQASDQIRELEDALTSARTRVKKSQKKL 471 Query: 471 KEKTQQLADVKTICEQEARI---KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 + + L+DV+T + + + LQA PCP+CGS +HP+ + P Sbjct: 472 QTAEEALSDVRTTQRRLRTLYDMGSAARLAQTLQADTPCPVCGSLAHPSPAVHAEEIPSA 531 Query: 528 NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS 587 E+ + T +L T Q ++++ L Q+ ++ + + A Sbjct: 532 ---------QEMDVCMQHVETAEKELQKCTAQAEQEKAACLRLEQELLHEQKRIKELLAD 582 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 E + E + Q+ ++ + QQ L Sbjct: 583 ---------------------ETMEAFCVRVAERENQLRRAQNACKALEKTYAEEQQQLF 621 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + + + + E + + +L + + L + + Sbjct: 622 ARKEQQKEQEALLQKNRNLIGLHEGEKNALE---RQLPEEYRDAEAVREAAALLEREVKT 678 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 + + ++C S + Q+ A + Q AQ + A A+ F ++ Sbjct: 679 AETARAEAEKREKAAAQKCARTESAKAAAQRVLKEAEEVRQAAQEAYTAAYCAADFLTEE 738 Query: 768 AFLAALM-DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 + A++ D LE++++ + Q A + P D E Sbjct: 739 EYHHAIVGDWAKSDYLEKVRERITAYDTAFQAAEELVKAAKAAAEGLCPPDM-------E 791 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 + + Q+++++ +QG ++ ++ L + A ++ G L ++ Sbjct: 792 ALTEAERIADQRVQDSARAQGVRMERWALYTRMTKEMDALERAGAARDKRYRVIGKLANV 851 Query: 887 IGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE------ALEVEVV 937 +K + F+ + L +++ AN++L + GRY LE++V Sbjct: 852 AAAKPPYQIHFQTYVLRSILSDVIDAANERLMMMSRGRYRFIHGEGGQKKKWWGLEIDVF 911 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETL 994 D + R RTLSGGE+FL SL+LAL LSD+V + +D +F+DEGFG+LDSETL Sbjct: 912 DEYTG-FPRLARTLSGGETFLASLSLALGLSDVVQHYAGGMHLDMIFIDEGFGSLDSETL 970 Query: 995 DTALDALDALN-ASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 D A+ AL + G+ +G+ISH+E ++ RIPV ++V + Y Sbjct: 971 DVAIRALLDVQREGGRLVGIISHIEELRARIPVHLEVCRGQNGSY 1015 >UniRef50_C3WDH6 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WDH6_FUSMR Length = 1016 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 190/1048 (18%), Positives = 432/1048 (41%), Gaps = 45/1048 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ L S K + I+F + NGLF I G TG+GK+T+LDA+ +LY + PR Sbjct: 1 MRPLLLEIEGLQSYKEKQVINFEK--LCENGLFGIFGETGSGKSTILDAMIFSLYGKIPR 58 Query: 61 ---LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 L S+S + + + + +F + + Y A + G + E Sbjct: 59 TAELDQDSKSLKNFLNTSSKKMEVYFKFALDEDIYEVSR--KYALGKSKGEEVLKEKETI 116 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +G+I+AD +K ++ A GL FTR+++L QG+F+ F+ K ++ E+LE++ Sbjct: 117 LRKNGEIVADSIKKLEKIIAEDFGLSDDDFTRTVVLPQGKFSEFVKLKGADKREMLEKIF 176 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E YG+ + + ++ + + E+L+ + + + +T E+++ L + +E ++ Sbjct: 177 TMEKYGKALQDKMKKEMDFWKKKDEELEEELAELVDITAEKIEELEKEKSNIVEEIERKT 236 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 ++ ++ L E ++ + + + + E+E + A L+ + A +R + Sbjct: 237 KEHKEIEKRYYELKNLKEEIEKYNEQLERKSRLELEKESIEYIRAQLTKGRNANEIREYI 296 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 E++ + Q+ E+ T+ + Q E+ +++ + + Sbjct: 297 EKLEISQGEKRKVENQLRELETQEVQYQEGIKKLEEDTKVQKEEIYKKELEKSQIYFDKS 356 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 N + L + ++ L ++++ T + Sbjct: 357 EEDTLNEVI----GYKGNLEYVEKGLERAKRNLEEIQKEIGVHTQDLANNTNELEEKERE 412 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 R++L +I Q+ + + E R L ++ KE+ ++ Sbjct: 413 LANLPEVSRENLSNYRDEIEEYQRVIRDYREKKSQKE-EYLLRLEELERKLEQLKEEERE 471 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 + I E+E R +L+ G+PCP+CGS H +E + + Q L Sbjct: 472 IDSQLEILEEERRENLAYELAKELKEGEPCPVCGSIHHNKIEHNSSEDIEKIQRDLKKAS 531 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 + + + G + ++ + ++R E + D +Q + + + ++ Sbjct: 532 EKKSSNIADIGKVSGSILSLKESIERLEVIYKERVVD----ESYYQEIISDKDRVIEEYR 587 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + + LD + ++ + +L+ + + I + + ++++ + A Sbjct: 588 EEERKLDTLAKERERVNSIV--IQLKEKCKNTQKNIEKSESRLQEYLAEIDEHSIRKASL 645 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 +++E ++R++EL A +I++ + ++ + + + Sbjct: 646 EKSIARLGESFVDKRKE--ELEKRRDELKANYQKIRKYEEEIASINRIIAKNDSQIVEIK 703 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + ++ + ++ ++ Q +++++ +++ F + + + Sbjct: 704 DRLEKIRLGINSYQVKRDSVNSQIEELNKTIEELISKY-------HFMTVEEVRDSYISG 756 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + Q ++ E ++ L+ + + + ++ E++ QE+ T+ Sbjct: 757 LEEREYSQKIESYEESWKEVNVLLRDLESRVQG-KDFSIELWEEISQLKERLNQEILDTY 815 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 Q++ + ++ + QL + R++Q+ + ++ A + + F Sbjct: 816 QRIEQISSDIALQKTQLADSKEKRKEQKEIRRKRAMAEDLYKKFS----------KGGFV 865 Query: 897 KFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE 955 F L ++ A+ +TR+ GRY L + V+D + R TLSGGE Sbjct: 866 NFLTTKKLKGVIENASHYITRITNGRYKL--YTDDECNFYVIDMFNDGIKRKVGTLSGGE 923 Query: 956 SFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDAL-NASGKTIG 1012 F+VSL LALALS + K ++ FLDEGFG+LDS+ LD ++A++ + IG Sbjct: 924 IFVVSLCLALALSKQLQLKGKIPLEFFFLDEGFGSLDSKLLDKVMEAIENIRREENIKIG 983 Query: 1013 VISHVEAMKERIPVQIKVKKINGLGYSK 1040 +I+H+E +K RI +++V+K Sbjct: 984 IITHLEDLKVRIDRKLQVEKAISGERGT 1011 >UniRef50_C5RC54 Exonuclease SbcC n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RC54_WEIPA Length = 1068 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 211/1087 (19%), Positives = 395/1087 (36%), Gaps = 70/1087 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L+L N IDF+ F + LF ITG TGAGKTT+ D + AL+ E Sbjct: 1 MRPIKLQLNNFGPY-DHAVIDFSN--FTESKLFLITGDTGAGKTTIFDGMTYALFGEGTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG-------NLQVPR 113 + +E FE G Y + + + G Sbjct: 58 -ERQPEDMRSEFADTVSETKVIFWFEHNGHFYEIKRTPTQMLKKKRGAKSDLDLTAHKAT 116 Query: 114 VELARCADG-----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKE 168 V L + L DK + L L+ +F + +LL Q +F FL+A+ E Sbjct: 117 VSLLEVDNTLKTPVAALGDKATVVNDQIKELLHLNAEQFRKIILLPQDKFREFLSAQSDE 176 Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKL-------QAQASGVTLLTPEQVQSL 221 + +L +L GT I+ Q + + +Q K + + LEK+ Q S + Sbjct: 177 KKVILRQLFGTAIFDQFTNELKQQQKISDSNLEKIVFQRNERLNQISWPQDDIETSAPTA 236 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 L VL K + ++ L ++ + Q+ + + + + K Q L Sbjct: 237 EEKLAVLIQMNKDMRVTITEQGNQLAVARKKLQSVQQEYQDGRRIADLYTQLAKRQQDLQ 296 Query: 282 ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAEL 341 +P + + W R AA I + +++N +L T + I + + Sbjct: 297 EKKTFKPEIDQKTVWLRTLRWGAAQRSIVDKQDQLNAQLNETSENKQQIDKAISVLKQQQ 356 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQF----SQQTSDREHLRQWQQQLTHAEQKLN 397 + + ++ + + ++ Q T +E L+Q + EQ Sbjct: 357 SSLKDAQAKHNEQQENIAEKRVTLQQIQSDLLPKSRQLTKAQEKLQQAIAAIKSGEQTQQ 416 Query: 398 ALAAITLTLTADEVATA--LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 L T +D L+ + +L L QI ++ ++ + + Sbjct: 417 VLTGQCQTAQSDLATQQKHLSDKQKIAVNEINLTRLISQIASLNEKSSEYDSRQITLKEI 476 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGST--- 512 + Q ++ + QL +K + R ++ + +LQ G+PC +CG Sbjct: 477 KAQATELAGQVATAENNQALQLQKLKE-QQSLRRDILIQQLKQELQVGEPCIICGQIYQG 535 Query: 513 ---SHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQS 569 H + ++ + E V+K + A ++ ++ ++ S Sbjct: 536 QQHEHEMDSSISYIDLKNAIQAVEETELAVRKATAQLAKVKTDHQTSLTKIDSEQVWLTS 595 Query: 570 LRQDEQALTQQWQ-AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAH 628 + + L +Q + + Q + D E L + + QI Sbjct: 596 RKNEIAHLYEQLKTDWQQIMGTLDQSFSQLPTAFDNNLLKETGQLALDFMRDTKAQIDVL 655 Query: 629 NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ 688 +Q I+ QQQ++Q + ++ L + + + ++ Sbjct: 656 SQDIVTKQQQVQQIKDKIVENNQTLVLQKNTKQDLTEEIEQLTGTSEGLLSEMA------ 709 Query: 689 NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 +E L + T + E Q +QQ+ + L Sbjct: 710 -----YEQKIERLQTEIKQYEGLGTKLREQLLTNENSQQEKQQQLTDVQQKLQQIQEDLV 764 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 Q + ++ D AF +T L+Q + + T + Sbjct: 765 NEQKILNESIDEGPVKDWTAFSDL------MTHLQQNPDEINQLHDEIMAYQTSIKNLSS 818 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + + G +E++Q + + + + + QL Q Q L Sbjct: 819 EVADLQHQIGNENHPDLEKLQGLVNEQQTFVEKQVADYTAKKAQLDQQIKIELSVQKLQD 878 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKF--RKFAQGLTLDNLVHLANQQLTRL--HGRYLL 924 + +D L + + F L +++ AN+ + GRY Sbjct: 879 EWLAQQAAGKDLFALVQAVDGNNDKRLRLESFILRRFLYDVLEYANRHYIGVLSAGRYQF 938 Query: 925 QRKA-------SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 L++++ D +R T TLSGGESF+ +L++AL+++++V + Sbjct: 939 ILSDRQAGRANQNGLDIDIYDQD-GGKIRATSTLSGGESFIAALSIALSMAEIVQHRAGG 997 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +ID+LF+DEGFG+LD +TL A++AL + SG+ +G+ISHV +MK++IP Q+ VKK+ Sbjct: 998 AKIDALFIDEGFGSLDEQTLSQAMEALSMVEQSGRLVGIISHVTSMKQQIPQQLAVKKL- 1056 Query: 1035 GLGYSKL 1041 G G SKL Sbjct: 1057 GNGRSKL 1063 >UniRef50_C9LWI8 Putative exonuclease SbcC n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LWI8_9FIRM Length = 1024 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 214/1067 (20%), Positives = 386/1067 (36%), Gaps = 68/1067 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L ++ S + +DFT + F I G TG+GKTTLLDAIC A Y E Sbjct: 1 MRPLRLTMEAFGSYGKKTVVDFTE--LGARSFFLIHGRTGSGKTTLLDAICFAFYGEASM 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-------- 112 A + F + + Y + + R + DG P Sbjct: 59 AGRTGTMMRTDEAPREARTSVDFVFALGTQKYHICRTPSYERMKKDGTGLTPVQASAMLW 118 Query: 113 --RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERA 170 A + ++LA + + L G F + +LL QG F L AK ER Sbjct: 119 QVEEGEAAENEERVLAQRPSSVTQKMTELLGFGPAEFRQVVLLPQGAFRDLLTAKVDERE 178 Query: 171 ELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTD 230 LL L TE Y ++ + + K+ +++AQ + L SL A V + Sbjct: 179 ALLAMLFKTERYRRLEELFKSRAKAMEARRAEIKAQEGAL--LAGGAADSLDAHRAVSEE 236 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 +EK L ++Q +QE R + L + + + R Sbjct: 237 KEKTLAVLEKQAAALQEKQEAAQCAEQEGIRAAEILTRWEKARKTLADHEKKRGSVERYR 296 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 +R A+ A + E+ R ++ A + R AA + + Sbjct: 297 AQLEEAQRAAQIEDVAAGAARDREKAKER-EAECAAQEKRREKAAHELKRAEDALVHEKA 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 E + + + + A R + ++ A +K A L A+ Sbjct: 356 REGELEEGKAKVRKLEEYGACAIDLAQARARAKSREEAAHEAAEKAAQAKAAQEKLAAEL 415 Query: 411 VAT-ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 +A + +R + ++L +++ Q ++ + + E + Sbjct: 416 LALGTREKELAERAAKAEGLSLALAQKEKEREARQNLALLKKRAAKAQEAAEIAGEKARA 475 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 +E+ + + E L+ G+ CP+CGST+HP A + P Sbjct: 476 AREEHETKRRNQRALEHVYMEGQAALLARSLEDGKACPVCGSTAHPHPTASKDEVPEK-- 533 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 + + +E +K + A L E + ++ T+ ++ A++ Sbjct: 534 ADVERARSEAEKAEKAREKAEKAQTAAEADLAAVRGELAAAQKSLTQTTEDAGSLAAAI- 592 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 LQ ++ A Q + ++R+ L Sbjct: 593 -----------------------------ASLQAEVKAAGQAAAAQKAAADERETLASRL 623 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 A E+ Q A + Q++ L + + L + Sbjct: 624 AQAEAAEKEAAKGAEAAKGEAAQAAGALQEKSASLPEAYREPKAVEMALAAARRGVAERE 683 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 + + ++ A + + + L + +K+ A L+ + F D+ AF Sbjct: 684 KALAAAQDAFSGAGKELAAAKAAAEAAKTTAALTQEEARKSAALLAERLKGAGFSDEAAF 743 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 A L + + + + + + ++ + + +++ Sbjct: 744 RAVLTGHFATAEGRKEVSD------RIRAYEDKRTAFAEAEKKAAEEAAGIAPPDLAKLK 797 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 + T + Q+LK+ +Q Q L + A + G L + Sbjct: 798 AAREEAAAAWTAGTREAAALAQELKERRSREEQLQKLTLEAASLEAAYHTTGRLAEVAAG 857 Query: 890 KEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKAS-------EALEVEVVDT 939 + + F+ + L ++ ANQ+L R+ HG+Y L+RK L++E+ D Sbjct: 858 QNPHRMHFQTYVLRSILADVADAANQRLLRMTHGQYRLERKEGVVDMRRSAGLDLEIFDE 917 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDT 996 A R TLSGGESFL +LALAL L+D+V + R+D++F+DEGFGTLD+ETLD Sbjct: 918 NTGYA-RPMATLSGGESFLAALALALGLADVVTNYAGGIRLDTIFIDEGFGTLDAETLDL 976 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 A+ L L G+ +G+ISHVE +K RI V+++V+K ++ Sbjct: 977 AIKTLMDLQKGGRLVGIISHVEELKNRIDVRLEVEKGEDGSTARFVV 1023 >UniRef50_C9KJP6 SbcC exonuclease family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP6_9FIRM Length = 1023 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 202/1056 (19%), Positives = 379/1056 (35%), Gaps = 62/1056 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + + + +DF+ + F I G TGAGKT++ DAIC ALY E Sbjct: 1 MKPEILTICAFGPYQKKVCLDFS--ILSEQPFFLIHGATGAGKTSIFDAICYALYGEAAT 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL---QVPRVELA 117 + + + + ++ F V+ + + R G Q P V L Sbjct: 59 EARTPRMLRNREAGPEVDTYVDLTFCVRDTHWHIRRNPEYMRKAKRGTGLARQAPEVVLE 118 Query: 118 RCADGKILADKVK--DKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 R DG++ + + L G +F + +LL QG+F FL A R E+++ Sbjct: 119 RLEDGRVAESWTRDGEVQARIVRLLGFQCKQFRQVVLLPQGEFRRFLMADTSARKEIMKV 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKL-QAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 L TEIY ++ + E+ + + + Q + + A L + Sbjct: 179 LFNTEIYQKLEDKLKEKATEVSKSYDGIAEKQRMYLAEANAKDEAEFAALLAAREQQTAA 238 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L+ Q ++ + +E + + +A E +K + + A+ + Sbjct: 239 LVKRTAALQSRKEACEKERDAARETMAKFTQVDKAAEELQKWERIVPEDEEAKAMLDRAD 298 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 + + + L RQ + L++ + + QQ E Sbjct: 299 RAAALMDLANQLQAARQDAAKRGQGLEALKQQGKKLATAYKQAEERFVMVQQQKPAHAAE 358 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + R + R+ + + ++ A + + Sbjct: 359 REELIVLQGLLKVARELE---QAKRDAVAKQTASEKGQQEAAAAKQQLLAAEQEFKALQQ 415 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 + ++ L + L Q + ++ A + + +E + ++ + + Sbjct: 416 EVEALQKEALNVDALKLRQQNLLAEQEKAAAAARSEALVREAAAGYEQAEQAAKKAETEW 475 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 Q + A+ L+ G+PCP+CG+T HP + V L A Sbjct: 476 QAARAELAHLRELAKEARAVLLAEHLEEGEPCPVCGATHHPKLAEAVTEI--VTDEMLKA 533 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 E +V + + + L + EA++L + +P Sbjct: 534 KEADVSGFEQRHQAAAARAQEKSGMLAAAKAEAEALVKQLAG---------------REP 578 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 + + + + + L I Q+ Q Q++ +Q + A Sbjct: 579 AELAAELAKVKTALQGAQKAAEEYGSLMKAIERKQQEQAQLQEKAAALEQKAAASAAEAA 638 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 ++++ LA R L ++L + + + Sbjct: 639 AAKALVQDKQAQLAGR---------------ELPAEPKELAHQYQQREAAWQAAEKAAVA 683 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 +++ + + A S +T +++ + + Q Q F L + F D+ A+ AAL Sbjct: 684 AEQDYHSLDTRYHAAQSAWKTKREELLRSQQQAAALQQSFAGRLVQAGFADEAAYEAALQ 743 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 + + + + + + + + Sbjct: 744 GSWRASDYRDKVRR------ELLSHEQALHTARTNLTDCQKTIEKLEKPDLAAAEDAASA 797 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 ++ L+ ++ L +Q ++TQ L+ L K G + Sbjct: 798 AQAAWQQALRESSAAETVLRSWQKRQKALDALREQSGELTQTYARITGLSELASGKTGSR 857 Query: 895 --FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK------ASEALEVEVVDTWQADAV 945 F+ + LD+++ +ANQ+L + G+Y L L++E+ D + A Sbjct: 858 VSFQTYVLHSLLDDVMEMANQRLLIMSRGQYELHAGQRQRANQQGGLDMEIFDHYSGYA- 916 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R TLSGGESFL SLALAL L+D+V + R+D++F+DEGFGTLDSETLD AL AL Sbjct: 917 RPLATLSGGESFLASLALALGLADVVQACAGGVRLDTMFIDEGFGTLDSETLDVALKALF 976 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L SG+ IG+ISHVE ++ RIP +++V K G Sbjct: 977 ELQKSGRLIGIISHVEELRSRIPARLEVTKTKSGGS 1012 >UniRef50_Q03JT5 ATPase involved in DNA repair n=4 Tax=Streptococcus RepID=Q03JT5_STRTD Length = 1059 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 200/1087 (18%), Positives = 405/1087 (37%), Gaps = 85/1087 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L N + + I+FT+ F LF I G TGAGK+TL DA+ +AL+ T Sbjct: 1 MRPVQLELTNFGPYR-KEVINFTQ--FDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 NV + ++ + F+ YR + R + G + + + Sbjct: 58 DRNVEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVI 117 Query: 120 ------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + + L DK+K+ + + GL+ +F + +LL Q F+ FL K + ++L Sbjct: 118 VDKIGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQIL 177 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------------TLLTPEQV 218 +++ GT I+ + + E+ + + +++K QAQ + E++ Sbjct: 178 KKIFGTGIFDRFQKSLEERLRQSNKDMDKRQAQIDSHFASQVWSEEELTVLASTPASEKL 237 Query: 219 QSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQP 278 L L + + + + + L L + + Q+ ++ Q L+QA Sbjct: 238 ARLEEFLSQRQESLTEQKSILKAAHEDLAQLQKSFQTAQDLAKIFQELEQAKERYRLEIE 297 Query: 279 QLAA--------LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI 330 + A L Q A+ L+ + ++ L + Q +E L + Sbjct: 298 EGAQGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDV 357 Query: 331 RHHAAK---QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQ 387 + + QS + Q+++ L TW ++ + E + + E +Q ++ Sbjct: 358 KAKKEELAIQSEDFLQKEEELETWKEDIIYSQSLAQEQEKIKRSTTNYKQLEETYQQARK 417 Query: 388 QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 ++ + L+ L A L+L + A L Q ++ Q+ K + L Sbjct: 418 EVEMLNKSLSDLEANRLSLESLHEAEKLFQIVG--------YSVENQLAQDLKEIENLNQ 469 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 + + + ++ + +E ++L + R + +A+L+ G PC Sbjct: 470 ELTKTEKRHQTLSFDID----QAQEILKELEEELRRTLVSRRQLMIVQLQAELEEGHPCM 525 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 +CG+ HP V QA E +K L ++ L+ Q + L + Sbjct: 526 VCGALEHPNVGGAQADEV------------ALKNLMDQVEKLQAQKEKQVATLSNRQATL 573 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAA 627 + Q L Q V A+L Q L++ + + + + Q + Sbjct: 574 SEVASKRQDLLDQVTKVKATLEKHYQELEE-----HVKGRFDFDFSIDYETDRGQALLLK 628 Query: 628 HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 Q + Q++ ++ + + + + + Q+R +L Sbjct: 629 VEQYYQELQKRYDKEETDYIRYQDELGKAQKKATDLAKTYQEAKAVLDQAQERLEDLQEA 688 Query: 688 QNRIQQLT---PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 ++ + + Q L + + E + Q+H + Q +++ + Sbjct: 689 HPELESVEVYQERISLAHQELNLYNKQVKENSEAYNQLHADIKGIKGQIESITKSKDKVN 748 Query: 745 QSLQKAQAQFDTALQASV-FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQT 803 Q +++ A+ + +L+A + + + E + L+ L Q L Q Sbjct: 749 QDVKRLSAELEQSLKAEGALANDLEQVELWLIEVNNQAIPMLQAKLTTYATLKQELQAQI 808 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 + Q D +L V+ Q+ + + + + + Sbjct: 809 RKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQLAQFSVMEKGLKDATATYQAAKTLQDSN 868 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL--HGR 921 Q + +++ V+ N+ + + ++ AN L R Sbjct: 869 QEAFKAHQELSDLVKVVKGENTALTG--RLNLEVYVIRQYFQQILDYANANYIGLLTDNR 926 Query: 922 YLLQRKASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV--- 971 Y L++ V D R ++LSGGE+F+ +LA+AL+LS++V Sbjct: 927 YSFVLSEEGRRARDHFGLDINVYDQLTGSE-RSVKSLSGGETFIAALAIALSLSEVVQNT 985 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 S +++LF+DEGFG+LD E L A+ L+ + + +GVISHV+ MKE I Q+ + Sbjct: 986 SKGAVVEALFIDEGFGSLDKEALTKAISVLEQI-GENRMVGVISHVDDMKEGIAQQLVII 1044 Query: 1032 KINGLGY 1038 K + Sbjct: 1045 KSHDGSS 1051 >UniRef50_O67124 Probable DNA double-strand break repair rad50 ATPase n=1 Tax=Aquifex aeolicus RepID=RAD50_AQUAE Length = 978 Score = 321 bits (824), Expect = 8e-86, Method: Composition-based stats. Identities = 191/1044 (18%), Positives = 423/1044 (40%), Gaps = 71/1044 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L +K K IDFT F F I G TGAGKT+++DAI ALY + PR Sbjct: 1 MRPLKLEVKGFTVYKKPQVIDFTPLKF-----FVIQGKTGAGKTSIIDAITYALYGKVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ +++R E ++F ++G YR ++ Sbjct: 56 YGASVATKY-VLSRGEKELKVALDFSLRGRNYRVERYYR---------EFPEDSQVRVYE 105 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G+ L K + + ++GLDY FT+ +LL QG+F FL + ER ++L L G E Sbjct: 106 EGRRLNIKANEVEKWLFKISGLDYKTFTKVILLPQGEFDRFLK-ESSERKKILINLLGLE 164 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 ++ + E K+ + E L+ + + TP + + L +L+ L +E K+L ++ Sbjct: 165 ELEKVRQLASETFKNLEGKREALKKEYELLKDYTPTKKEVLEKTLKNLEEELKELKETEE 224 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +Q L +D L++E S+ L++ E++ + L ++ P +RI Sbjct: 225 KLRQELKKAEEKDSLERELSQVVTKLKELENLEKEVEKLREKLEFSRKVAPYVPIAKRIE 284 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 E L ++ + ++ L + + + AE ++ ++ + R ++ Sbjct: 285 EIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKFKEEKEREKELEHRLKK 344 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + + + L++ +++ A+Q+ L+ T Sbjct: 345 LQE----IKEILKELSQLSSSLKEKEREYEQAKQEFEDLSERVEKGKKLVAETEEKLEKI 400 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + + L + ++ + E ++ +++ +L ++ Sbjct: 401 KELFSEEEYTSLKMKERLLVELQRKLKELKEKEGQLENLTQKYKEKKKVHEKVLNELKEL 460 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + ++ + L G CP+CG V+ + L++ + Sbjct: 461 ERELKERELHYHAHMVASYLSPGDTCPVCGGIYRGKALE------NVDAEGISELKHAKE 514 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +E + L +++ + E + LR + + L ++ Sbjct: 515 LKEKEEREIDTTLKLYAQKINSLKEEMEKLRNEVEELRKEIPE----------------- 557 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 + ++ ++ L ++ +L+ ++ + + + Q+Q E+ Q L T L + Sbjct: 558 --NLKERIKKLEELRIEKEKLEHKLNKYRKALEDRQKQKEEAQAKLHKAQTELELLKEKI 615 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 E+ + ++ + + L++ + L + + + +E + +++ Sbjct: 616 REKSRLVKEFKELYR--------VERLEDYEESLKEEINYINSKLQEIEEKEKKLRKHFE 667 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 ++ + L + L + + ++ + + + + L E Sbjct: 668 ELSSRKSKLEGELSALNESINSLEEERKEKLKELANIYEVAKSPREVVELYLGDKEAE-- 725 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 LE+ + E + + ++ E L +++ R + I+ E +L Sbjct: 726 -LERKIKEFEESFQSLKLKKSEIEEKLKEYEGIR---------ELSDIKGEYESVKTQLE 775 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 E GE++++L+ + ++++ L ++I+++ +++E + +++ GD+F+K+ Sbjct: 776 EKHKKLGEVKRELEHLGERLKRKEELQKEISELEKKLEVYRVISNDF---RGDRFQKYVS 832 Query: 901 GLTLDNLVHLANQQLTRLHGRY--LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 + L +V A++ + G Y L+R + VV R +LSGGE+FL Sbjct: 833 EIMLQKVVDRASEYFYKFTGNYFFELERATKGRDKDIVVVESSTSQRRPVSSLSGGETFL 892 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVISHV 1017 SL+ A A+SDL+S ++SLF+DEGFG+LD + + + L+A+ + K IG++SH+ Sbjct: 893 ASLSFAFAVSDLLSGSANLESLFIDEGFGSLDQDMRERVSEILEAIKTNVNKMIGIVSHI 952 Query: 1018 EAMKERIPVQIKVKKINGLGYSKL 1041 ER +I V+K ++ Sbjct: 953 PDFAERFTERIVVEKKGDYSEVRV 976 >UniRef50_D2SG48 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SG48_9ACTO Length = 986 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 193/1064 (18%), Positives = 339/1064 (31%), Gaps = 107/1064 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ SL + G +D + A +GLF + GPTGAGKTTLLDA+ ALY P Sbjct: 1 MRLHSLSITAFGPFAGTETVD--VDAVARDGLFLLWGPTGAGKTTLLDAVVYALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-----RVE 115 + E + GE + R + G + V+ Sbjct: 59 ARGEEKRLRSDHADAATRTEVACELTLAGERLLVVRRPEQTRPKKRGAGETTEQAKLTVQ 118 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A + ++ ++ + E GL +F + +LL QG FA FL A+P++RA LL Sbjct: 119 RWDGAAWEPVSTRIDEGSEYLRVRLGLSAEQFCQVVLLPQGDFARFLRAEPEDRARLLRT 178 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L + + + + ++A L + + + + Sbjct: 179 LFDVGRFARAEDWLAAERRAAEETLRTDRERLGRLLDRVAHAADVAVPEELAPELVGARP 238 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + ++ D A+ A A + E A+ + A A+ R + Sbjct: 239 GASVNAWVAAVRSRAAGDLTAATAAAEAAAAASARLDGELAEARGLADRHARRDRARQEL 298 Query: 296 WE-RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 E + E L R L+ + A + L + + Sbjct: 299 AELTVEEEQLGLLRARADAGRRAEALRDVLESAGRTALAAEAAATALAAARAAWAEVADG 358 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 D E A + + ++L + + AL A + Sbjct: 359 RDADALTARELRDEAAAARALAPEADRAAGLARELGRLGRVVEALTARCEEGVRTAASWP 418 Query: 415 LAQHAEQRPLRQHLVALHG-----QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 QR L A + + V R Sbjct: 419 GRVAEAQRRLDAASAAAVRLPGLTAAADAARTALDAAHRAERVAAHLAAARETAEAARTA 478 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 + + + L +++ A L G CP+CG+T HP + + Sbjct: 479 WVDAREALVELRA----ARLDGMAAELAAGLAPGADCPVCGATEHPRPAEHTGPRVSADD 534 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 R +D ++ + ++ L ++ + Sbjct: 535 EE----------------RARAVVDTAEERTAAARRTVEERERELAVLRERAGEL----- 573 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 P + E+ ++ L G + A +++ + + L Sbjct: 574 ----------PAAELAACAEQARAERAEVAALAGDVDAARRELADREAGRDAATTRLAAD 623 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 + D L + T L R+++LT E + Sbjct: 624 REELQRRTAERDGRADALTELTA---RLDAARGADTDLPARVRRLTRTAERCEAALSAEA 680 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 E A+ A+ F D Sbjct: 681 EELRARAAA-----------------------------DAAREAAARRATAAGFADLVDA 711 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 AL+D L +LE+ + + R A + T L V +Q Sbjct: 712 ADALLDAGELARLERRLRQHDEARSVAAATLADPELT-----------DLPARPDVPALQ 760 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 Q AQ E + R+ + + ++A+ L L+ Sbjct: 761 QRCAQLTAHREEAVARLEQARRCAGALDALAGEVVSAEVELAERRAWAGRVAGLADLVNG 820 Query: 890 KEGD----KFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA-------SEALEVEVV 937 + + + + F L+ + +A+++L + GRY L ++V Sbjct: 821 RGANTLRMRLQSFVLAARLEQVAEVASRRLQEMSGGRYTFLHSDAQARHGARGGLGLDVF 880 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETL 994 D + R T+TLSGGESF+ SLALAL L+D+V + ++D+LF+DEGFGTLD+ L Sbjct: 881 DEYTG-TRRPTKTLSGGESFMASLALALGLADVVTAEAGGIQMDTLFVDEGFGTLDALAL 939 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 D ++ LD L G+T+GVISH+E ++ RIP +++V Sbjct: 940 DAVMNVLDELRRGGRTVGVISHLEELRTRIPTRLEVVAGRHGSR 983 >UniRef50_C8XHA7 DNA repair exonuclease, SbcC n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHA7_NAKMY Length = 995 Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats. Identities = 195/1085 (17%), Positives = 347/1085 (31%), Gaps = 131/1085 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L L G +D +++GLF I G TGAGKT+LLDA+ AL+ P Sbjct: 1 MRLHELELSAFGPFAGTETVDLD--AVSADGLFLIHGDTGAGKTSLLDAVAYALFGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 N ++ + + G R + G LQ +V L Sbjct: 59 PRNEARRLRCDRAPADVVTQVRLVATLGGHRVEIIRRPEYLRPKARGSGSTLQRGKVSLR 118 Query: 118 RCADGKILA-----DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 A +V + + L G+ +F + +LL QG+FA FL A ER +L Sbjct: 119 WLDRTPAGARPEGLTRVDEVGDAVIDLLGMSADQFFQVVLLPQGEFARFLRADTAERGDL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----------------TP 215 LE L T+ +G+I + + A L + + Sbjct: 179 LERLFDTQRFGRIEDWFAQTRRVAGQRLRECDDHIREIAARVAEAARVEAAPEPDDRWLA 238 Query: 216 EQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 L ++ + + ++ L T++ + ++ L + Sbjct: 239 GLRDRLADRAELAREAAQDAARQREVSAAVLRAATQRAARTARLAELRRRLVDLERRAPE 298 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 + L A + A RQQ RL + A Sbjct: 299 IEQDRRRLDAHTRAGPVVAAARAQQAAGEVRADRRQQRVAAGRRLHALAEAAADPDRLDL 358 Query: 336 KQSAELQQQQQSLNTWLQEHD-RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ 394 A+ ++ ++ E + + + R + + EQ Sbjct: 359 GLLADDPVAIRAAAGVDRDRAGALIPLVGEAQEQQRDQAALAAARRRHHRDENAAVDVEQ 418 Query: 395 KLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 +L AL L + + + + +++ + VA+ Sbjct: 419 RLAALPPRLAELDRR---------VDLARSARDRLPAAQAELAAAEQIREAAVAVP---- 465 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 E +R ++ Q D + Q L AG CP+CGS H Sbjct: 466 ELAERRRRAEAAAVAATDRHQVAVDERQALVQRRIDGMAAELAGTLSAGDGCPVCGSVEH 525 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 P+ A + D+ T + +NE ++ Sbjct: 526 PSPARPLAAPVDAGLIEAAQVRE---------WRAAADRDSATGRRWEAQNELAVAQER- 575 Query: 575 QALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 A + +A A + +D RQ R+ + L G A + + + Sbjct: 576 -ACGRLAEAAEAQVRTHRATVD-------------RQTRIAANLDALVGLREAAAKSLFE 621 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 + + ++ L+ A + D+ + L + + S +QR+ L A + + Sbjct: 622 QELRRDELGTLVALGAAEIASLAARVDQRAARLRSARGAHPSIRQRREYLLARAAALDAV 681 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + +D V Sbjct: 682 AQACAAVTDADAQDERARATVT-------------------------------------- 703 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 L F D AA + +L + + E + + Sbjct: 704 -RLLADFGFGDLAEVTAAADLDA--PRLAERIRTAEVDAAALRAQLADPE---------L 751 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 + V V + A ++ + + + +Q A + + A + Sbjct: 752 AGLDESDRVDVAAAEAAAAADARRAQAAQQQALVLDDRFRQVATAAHRLVAAWRAAAPVR 811 Query: 875 QQVEDWGYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKAS 929 Q L ++ G R + L + A +L R+ GRY + Sbjct: 812 AQERQVAVLTEVLLGRGENALGMTLRTYVLAHRLAQVAQAATDRLARMSAGRYSFVHRTD 871 Query: 930 -------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDS 979 L +E++D W VR +TLSGGESFL SLALAL L+D+V+ ++D+ Sbjct: 872 RESRGRAGGLGLEIMDGWSG-LVRPAKTLSGGESFLASLALALGLADVVAAEAGGRQLDT 930 Query: 980 LFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 LF+DEGFG+LD + LD + +D L A G+ +GV+SH++ ++ RIP QI+V + Sbjct: 931 LFIDEGFGSLDPDALDLVMATMDELRAGGRVVGVVSHLDELRLRIPRQIRVDRTPQRSTL 990 Query: 1040 KLEST 1044 + Sbjct: 991 AVVGQ 995 >UniRef50_C7M6V9 SMC domain protein n=2 Tax=Capnocytophaga RepID=C7M6V9_CAPOD Length = 1182 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 298/1183 (25%), Positives = 487/1183 (41%), Gaps = 141/1183 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+ L N+ S++G + ++ EP S GLFAITG TGAGK+T+LDAICLALY++TPR Sbjct: 1 MKILSVSLHNIASIEGPFTLNLEAEPLKSVGLFAITGATGAGKSTILDAICLALYNDTPR 60 Query: 61 LSNVSQSQ--------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 L+ S +L+ + A+V F+ V G+ Y A W RA N+ Sbjct: 61 LATTKNSVAIADGSAEVQVNNVKNLLRKGAISGYAKVVFQAVDGKTYEAEWQVRRAYNKL 120 Query: 106 DGNLQVPRVELARCADGKILA-DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G +Q ++L D +++A ++ LE GL + FT+S++L+QG F +FL A Sbjct: 121 SGAIQPETLQLTCLTDNQLIAENRKTLVLEKIKECVGLTFDEFTKSVILAQGDFTSFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R+++LE+LTGTEIY +IS V+E +K + EL+ L+ Q + LT E+ +LT Sbjct: 181 NDDKRSDILEKLTGTEIYTRISKQVYELNKQHKNELQLLEKQLENIVFLTEEERSALTEQ 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 L + K L + ++ W Q Q+ ++A E+ + L+ Sbjct: 241 LTADEERLKTLQASLATLKEQQQWFDNQKLYTQQWQEAIANKEKAEQEKTSQAERFGELA 300 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHA---------- 334 + + + ++ LA +Q ++E + A +A + Sbjct: 301 IIEQLQAIKGDILTEQREKELLATAQQHLKEATAEKERLTANKAKVSEQKLLTENDLATA 360 Query: 335 -----------------------------------AKQSAELQQQQQSLNTWLQEHDRFR 359 + LQ +++SL + + Sbjct: 361 KKAYEIAKPFIARAKELDVRLAELTQIFEQKQQQQEAKETALQAKKESLEKVTEHIQKGE 420 Query: 360 QWNNEPAGWRA---QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA---- 412 ++ + W +Q + L+Q ++ +KL A + L Sbjct: 421 RYIQQEEQWLNTHPDEAQLYRNALWLKQLVEEQQQLNEKLTAHSQAEERLRQQLNELKAQ 480 Query: 413 -----------TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 LA+ + + +I K+ +V + + QE + Sbjct: 481 YPIQALPSTDIEMLAKQQKAYLTALQVYQADREIAKHIKQYTDAKVQREALLQEMQNTQS 540 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEA------QRAQLQAGQPCPLCGSTSHP 515 + E QR K + E+ + +E R L G+ CP+CGS HP Sbjct: 541 QILETLQRLKTEKIATQIACDTAERIYQRAQIENTKDVAFLREHLVEGEACPVCGSVHHP 600 Query: 516 AVEAYQALEPGVN-QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 A Q L + +++ L +E T +L + K+++ E Sbjct: 601 NAHKAVAEHLIDTVQQEFLTAKKQLETLTKEVITKETELKELQKRIESQTAENAERTDLW 660 Query: 575 QALTQQWQA-----VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 Q +++ S+ I D I E+ER +L++ L ++ Sbjct: 661 QQESERLSQSVYYTTYPSVKIEEYITDKIAKTEHLLAENERLFEVLNRLKSLTDELNTLA 720 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 + + Y+QQ ++ Q L + A + + + W+ + + Sbjct: 721 KDVENYKQQRQKYSQQLQSLQLSDAWLNLWKTDIVQFQTQITTAKTDWEAHSACIEKYKK 780 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ--QDVLAAQSL 747 R+ +LT L S ++ E T + + Q L ++ L + + +S Sbjct: 781 RLAELTQERTELASSQQVLRQELTELTTTIDKEQAQLQTLKEERAGLLEGKSVQVIEESY 840 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQN------------------- 788 Q+ Q T L+ + L +E+TL L +Q Sbjct: 841 QQHLEQLTTLLEQTQQQYNAILLEMTANEKTLETLAMQQQQSQAHIAESTHKIEEWLTAY 900 Query: 789 ----------------------LENQRRQAQTLVTQTAE-----TLAQHQQHRPDDGLAL 821 L+++R+ Q+L + A+ Q + L Sbjct: 901 KPAQIEHIRRKMQEWANRSHEWLQSERQALQSLNDRIAQYNTIANEKQQALETLKEKRPL 960 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 T E I Q+LA+ + + + +L D R L + + W Sbjct: 961 NFTEEDIVQQLAEQTAEEDTFRDTVVTQKSRLLNDEQQRAIAVELHTAKEEKEKLAHRWS 1020 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 LN LIGS G+ FRK+AQ TLD L+ AN Q+ L+ RY LQR + L ++V+D Sbjct: 1021 LLNDLIGSSTGNAFRKYAQEYTLDMLLQYANVQMRYLNRRYTLQRIPNS-LSLQVIDNDM 1079 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 VR +LSGGESFLVSLALALALS L S K +++LF+DEGFG+LDSETL ALDAL Sbjct: 1080 GAEVRSVYSLSGGESFLVSLALALALSSLSSTKMNVETLFIDEGFGSLDSETLSVALDAL 1139 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 ++L GK +GVISHV+ M ERI V++ V+K G G SK+ + Sbjct: 1140 ESLQNQGKKVGVISHVQEMVERIAVKVVVQK-EGNGKSKIVVS 1181 >UniRef50_Q8EP67 Exonuclease n=1 Tax=Oceanobacillus iheyensis RepID=Q8EP67_OCEIH Length = 1029 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 199/1073 (18%), Positives = 429/1073 (39%), Gaps = 90/1073 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+L K IDFT+ LF+I+G TGAGKTT+ D I ALY Sbjct: 1 MRPLYLKLTAFGPYKDTEIIDFTK--LGDVQLFSISGNTGAGKTTIFDGIAFALYGRASG 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 D E+ F +K YR + + + + EL Sbjct: 59 SDREDNRLLRSDFAEDHTHTSVELTFTIKERTYRVLRQPGHIK-KGNKTKTGEKYELFEL 117 Query: 120 ADGKILA----DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K ++ V + + L GL +F + ++L QG+F L ++ + + +L Sbjct: 118 TEQKEISIVDRQIVSEVDKKIEELIGLTQDQFKQIVMLPQGEFRKLLTSETENKEAILRR 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASG----------------VTLLTPEQVQ 219 L TE Y ++ ++ ++ + ++ Q + + + + Sbjct: 178 LFKTEHYKYMNEILRQKKNTFEQSYNRVSDQLTQTMKQVSSTFPLRENSKLQYVFQTEYY 237 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 ++ L+ L +E+ +++ Q ++ ++ Q+ + + + + + + + Sbjct: 238 NVQQVLEALNEEKTYYHQEIEKKTQQYTSSYKKHDIAQKEYYAAKHINEQFDQLQVKKQR 297 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASI---RHHAAK 336 L Q L + + AE + + I Q +LQ ++ AA+ Sbjct: 298 SQELMNKQAEIRLIENQLKAAEQAQRIEPIEQFALNYQQQLQEKEIQLKTLTEKEQQAAE 357 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 Q + + ++ ++ ++ + ++ + Q S+ ++ + Q EQK+ Sbjct: 358 QLKLVTAKYKNEEEKSEQREKISIYISQLESYLPIVEQLDSESNEIQSLKNQNVQQEQKI 417 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 + ++ +L++ ++ + + + + + +++ +L + ++ +E+ Sbjct: 418 REDGQLLERKEKEQ--ESLSEEIKKLTKQVEKASDLNKRLTELRQVGKLLQRLISLQKEE 475 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + +Q Y+ +Q EQ + L + CP+CGST+HP Sbjct: 476 AYIQNKYQQTKQDYENSEKQY----QEIEQNWINNQAFVLASHLHDEEECPVCGSTTHPN 531 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + + E + R Q + K Q + S + Sbjct: 532 KASIENQSVT----------------KEALESFRIQKEEKNKNWQEQQVALSSTKTSLTE 575 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 ++ + SL+ D+I ++ Q E + I ++ Y+ Sbjct: 576 VSAELNEWGISLDNPSITFDEI-------------VQEGKQLAEQKKNIQHAKEKRNNYE 622 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 ++EQ+++ + + E+ S L ++Q +++ E ++ +L Sbjct: 623 AKVEQQKREDKKNKEAFEQLKQKYQEQVSLLKSKQASHIEKKKQVPEEFH---QLSKLKD 679 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 L Q + + + ++Q+ ++ L + S+ + Q Q ++ ++KA +F+ Sbjct: 680 SLRIQKQQKQEMEQAWKEIQQEYQQITQRHLEIRSEVKNYQTQITDLSKQVEKANKEFEQ 739 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 + + F ++ + A ++E L Q +Q +N + +++Q V + LAQ ++ Sbjct: 740 KISEAGF-TRETYQEAKLEESILLQRKQQVENYKQEKQQIDNQVKELEAILAQQERQDLG 798 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 +++ L +N +++ ++ +++ + L ++A+ + Sbjct: 799 F----------LEERLRDLKHDFEQNLNELNTLKKFDQEIRSIKERMEVLHNEVAETENK 848 Query: 877 VEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA----- 928 + + ++ + K F ++ Q L+ ++ AN +L L G++ L R Sbjct: 849 LMVITEVYDVLRGQNQKKVSFERYLQMEYLEQIIEAANYRLKDLSNGQFYLTRSDRQESH 908 Query: 929 --SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLD 983 L ++V DT+ RD +TLSGGE F SL LAL +SD++ I ++F+D Sbjct: 909 GRQSGLALDVYDTYTG-QTRDVKTLSGGEKFNASLCLALGMSDVIQSFQGNVMIQTMFID 967 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 EGFG+LD E+L A+D L L SG+ IGVISHV+ +K+ +P I+VKK Sbjct: 968 EGFGSLDEESLTKAIDTLVQLQKSGRLIGVISHVQELKDILPATIEVKKTKEG 1020 >UniRef50_C9XND8 Exonuclease subunit C n=7 Tax=Clostridium difficile RepID=C9XND8_CLODC Length = 1179 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 201/1196 (16%), Positives = 429/1196 (35%), Gaps = 171/1196 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L LNS + IDF + GLF I G TG+GK+T+LDAI +A+Y R Sbjct: 5 MRPIRLELTGLNSYIDKQVIDFEK--LIERGLFGIFGTTGSGKSTILDAITIAMYGNISR 62 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + + + EFE+ + R + +R + + L Sbjct: 63 ------NTKEYINSVCDKAIISYEFEIGSKNTRRRYIVDRTIARSKTGTKTSNARLIEVL 116 Query: 121 DGKI---LADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + I LADKV + E A + GL FTRS++L Q +F FL +R ++LE + Sbjct: 117 NDNIQNVLADKVVEVNEKVAQVVGLTANDFTRSVVLPQDKFNEFLRLSRADRRDMLERIF 176 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E YG+ + V ++ L+ L+++ S +T E ++ L L + EK Sbjct: 177 NLEKYGRSLGEKVKKRKNIQLQNLKDLKSKLSQYDGITEEVYNNINQELIELKNLEKDKN 236 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 A Q+S E Q + + + + + + + ++A + A+ + P+ Sbjct: 237 NALDLAQKSYEESKTVYEEQLKLEKNELRKNELDLKNSEIKEKIALVENDSNAKKVDPYI 296 Query: 297 ERIAEHSAALAH-------IRQQIEEVNTRLQSTMALRASIRH-------HAAKQSAELQ 342 + + + +++ +N L+ T I +++ LQ Sbjct: 297 SSVQNLEKKIDEDSFVVSNLEKKLAILNQELEVTKNRYEKINKIKNEEVPKLSEEKIRLQ 356 Query: 343 QQQQSLNTWLQEHDRFRQWNN--------------------------------------- 363 Q + + + Sbjct: 357 QAIKLEEELVLLDRELKDLKESGINLNKTKVELEKVKQVSESRKDAVTKSIKEVEGKIDK 416 Query: 364 --EPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQ 421 A + + + ++ KL + T + ++ Sbjct: 417 VNISAELKQKIFLAYEYEKDYNNVLEEKNQKLNKLEEILKETENINLKVRYIDKDKNDVN 476 Query: 422 RPLRQ---------------------------HLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 R L L + + + + +Q ++ + + Sbjct: 477 RNLENLSLHLDVLLKKCPGKSADLLLKSEYVTELRSKANNTKENEIKKSSIQDELKIILE 536 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 + +N + ++ + + D++ E+ + R +L+ PCP+CGS H Sbjct: 537 SKFNTEREVNLLNEKLENNRKNRDDLEKELEELKYLNLASELRRELKENMPCPVCGSKHH 596 Query: 515 PAVEAYQALE---------------PGVNQSRLLALENEVKKLGEEGATLRGQLD----- 554 + E ++ + L +V +L+ Sbjct: 597 ENHNITKYDENISFVKEKLEKLEKEKISIRNNIEELNAKVSGYLSIEKMKTKELEDVKGK 656 Query: 555 -------AITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDE 607 + K+L ++ + L+ + Q ++ ++ + + + + I+ E Sbjct: 657 LGGIPSSQLLKKLDEEQRKLALLKSNIQEWEKEKESTENKVTLAKEEKNKIEKEELKIRE 716 Query: 608 HERQLRLLS-----QRHELQGQIAAHNQQIIQYQ------------QQIEQRQQLLLTTL 650 + L+ + L+ + Q+ + + ++I + ++ L Sbjct: 717 SLNNYKKLTRDLNIEIEGLENKCKKLKQEYLGLKTITKVSNLLSKVKEIRENEKELELLS 776 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ----------------- 693 TG++ L D + + + + + + L + Sbjct: 777 TGHSNLLKNRDSLDIKIRENESKLHEIEIELIKARELYVEKKLSRDNKYKEVINITKGDL 836 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 +L + ++ +E + + + +++ + + A + + ++ Sbjct: 837 AKNLLHNVEENICKILEQEESSKKKLEEQRLEYEKNIAEKHNIDGRLKTAKEQYKDQKST 896 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + L + F+ A AL+D + +L + E +++ + + E L Sbjct: 897 LNKLLAENKFESIYAVKRALLDTDAVKKLIEEILEHEEEQKLLSFKIKSSKEKLNGRSIK 956 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + EQ++ E+ ++ + G + QL D+ + +Q+ + Sbjct: 957 K--------EYFEQLKDEIYNLKVEIGNISKDIGANQNQLITLKDSLDKINDFNKQLKVV 1008 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEAL 932 V+ L+ +G+KF ++ L + A+++L + GRY L+ L Sbjct: 1009 EHNVDLLEELDK---CVQGNKFVEYVSTNQLKYIALEASKRLDGITKGRYALEI--DSTL 1063 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLD 990 + D + R TLSGGE+FL SL+LALALS + ++ FLDEGFG+LD Sbjct: 1064 NFVMRDNFNGGERRSIDTLSGGETFLTSLSLALALSSQIQLKGSAPLEFFFLDEGFGSLD 1123 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 SE L+ +++L+ L+++ ++G+ISHVE +K R+PV++ V SK++ ++ Sbjct: 1124 SELLEIVIESLERLHSNNLSVGIISHVEELKNRVPVKLLVSSSEAGIGSKVKIEYS 1179 >UniRef50_C6D8R3 Exonuclease, putative n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8R3_PAESJ Length = 1030 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 206/1068 (19%), Positives = 389/1068 (36%), Gaps = 79/1068 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L + + + +DF+ + LF I+G TGAGKTT+ DAIC ALY Sbjct: 1 MRPLKITMTAFGPYRDAETVDFSE--LGEHRLFVISGSTGAGKTTIFDAICFALYGTASG 58 Query: 61 LSNVS-QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + D E++F V YR F R + + + EL Sbjct: 59 EDRSEPRMLRSHFADDEKHTAVELDFAVGRRMYRVFRQLPH-RKGANKSETGGKAELYEL 117 Query: 120 ADGKILAD----KVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 G+ + V D T+ GL +F + ++L QG+F L + + E+L Sbjct: 118 TGGEAVPAVDRFMVGDVNAKLETIIGLTKEQFNQIVMLPQGEFRKLLTSDTDNKEEILRR 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQV---------QSLTASLQ 226 + TE+Y ++ +Q++ +L++ + + + + Q+L L Sbjct: 178 IFRTELYQRLETRFQQQNRELGDQLKEAKIRVDHFMKQAADNLPRREDSQLAQTLAQELY 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 + L +Q + Q Q+ Q + +LA+ Sbjct: 238 NAAQLSEALEQEIGYYRQLIAEGESGKRELQRQLGEQEQALQGELALQARFAELASEQAK 297 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + + E LA + + A+ + + + ++ Sbjct: 298 RERLAAQSGEHAERERRLLLAERAALLAPYAEQAVRAERDAAAKQQARDMRRQAAEAAKE 357 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 +L + + R + E + + ++ + Q EQ A + L Sbjct: 358 ALAAAEERYRREEERGAERQAAERELHRLAELAPAVQTLEAQRVAVEQLAAAEQSGAAKL 417 Query: 407 TADEVATALAQHAE-----QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 T+ E A A+ A+ Q + V +V Q+ ++ Q I + + + + + Sbjct: 418 TSAEALIAEAKEAKLTLATQLKAIEGAVEALPSVVEQRNQVLQTGKYISKLIELEKELVS 477 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + +R Q + + E+ A L GQPCP+CGS HP Sbjct: 478 HSSVIEERALSLAQ-IREEHDRLERNWIEGQASLLAAHLHDGQPCPVCGSQEHPGKAVAA 536 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 P R QL +QL R E E + A W Sbjct: 537 EAVPS-----------------------REQLQQAKEQLSRYERELNEAKLQAAATRSSW 573 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + A L + + Q E ++ + L++ E G +Q+ Q ++IEQ Sbjct: 574 EGSAAELAEYG---AEASGLAEQQGELRKRWKQLNEEAERLGAQVEQGKQLKQRAEEIEQ 630 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + + LL Q R + + ++ + +Q+ L+ Sbjct: 631 KLEQLLQEKDKLQAEQQQIAV------ERGAKQSALEKELERIPEELRSPKQMELRLKQQ 684 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 E + ++ + + + +QQ A + A +F+ L + Sbjct: 685 RSLAESLAAAWKEAQDGLLRMRAKFAEEQAHAEQTEQQLAEARVNAALAAKRFEEELAKA 744 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 F ++AF A + +Q L++ + A+ + + + L+ QQ Sbjct: 745 EFSSEEAFREAHLPDQERRALKEQLEAYNTALAAARKRIEELEQELSGKQQ--------- 795 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 +E ++ +A+ +++ T + + + R ++ ++ ++E Sbjct: 796 -ADIEALKAAIAELKERIEAATNALQIASRFAEDAGKLRTAIDQAAAKVKELEAKLEQVL 854 Query: 882 YLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHGRY--------LLQRKASEA 931 L ++ K F ++ L+ ++H AN +L L G L R Sbjct: 855 DLYQMLKGDNALKISFERYILIEYLEQILHAANVRLRHLSGGQFVLQRSDRLETRGKQSG 914 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGT 988 L ++V D + RD +T+SGGE F SL LAL ++D++ I+ +F+DEGFG+ Sbjct: 915 LGLDVYDAYTG-QNRDVKTMSGGEKFNASLCLALGMTDVIQSFQGGVSIEMMFIDEGFGS 973 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 LD ++L+ A++AL L SG+ IGVISHV+ +K P ++V K Sbjct: 974 LDEDSLNKAIEALVDLQRSGRMIGVISHVQELKAAFPATLEVYKTKEG 1021 >UniRef50_C7RGF7 SMC domain protein n=2 Tax=Anaerococcus RepID=C7RGF7_ANAPD Length = 1011 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 191/1075 (17%), Positives = 411/1075 (38%), Gaps = 96/1075 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L+++ + K E IDFT +F I+G TG+GKT++ DAI ALY + R Sbjct: 1 MRPRRLKMRGFITYKEEIDIDFT--TLFEKKIFLISGATGSGKTSIFDAINFALYGKVAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPD-GNLQVPRVELARC 119 + + + D ++ + ++FEV YR + + G V L Sbjct: 59 DISADRLRCDFLSEEDPYTYVSLDFEVGERTYRIERIPRQVAKKTKIGQNIGNAVSLYDI 118 Query: 120 ADG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG +L++K + E+ + GLD +F++ MLL+QG+F FL+AK ++A+LL ++ Sbjct: 119 TDGVTLLSEKKTETDEMIKNIIGLDDKQFSKVMLLAQGKFQEFLSAKSTDKAKLLGDIFK 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T Y + E K + ++E + + L E++ L ++T + ++ Sbjct: 179 TYEYKNFQDKIKEMAKDSIQKMEYIDNDLENI-LSYNEEISGLIDRDSIITHDFPEMEKV 237 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 ++ + + D L++ +A++ L + +KA+ + Q Sbjct: 238 IEERKLVYE--NKSDLLKESEQNIDKAIKSDLRDLQKAELDNTNIEKYQEIEKKLRAERE 295 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 L + ++ E+ + K + L+ ++ T L+ + Sbjct: 296 KESEYKKLRDLIRK-SELANNISIFEKNYQGTLTDIDKNKSNLEILKKDEKTALKTKEEV 354 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT--LTADEVATALA 416 R + A R + + E + L ++ A +I L + Sbjct: 355 RGKYEKLAEDRLKLDKLKRKAEEIENTILSLEKFKEAEIAYKSIEERTKLLDQTQKEIES 414 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ-------- 468 + R+ + + ++ + N+ + + L +R+ Sbjct: 415 LEKDLAKERELFDLNNELLGEITEKGRSESKNLSNLMENIRKEEEDLKMLREIKSYEESL 474 Query: 469 -RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGV 527 ++ +L + ++ + + + CP+CGS A+ + + Sbjct: 475 LSLTKEKDKLESSELKAKENEDLLIINKLIDRTNEEGICPVCGSKHDEAIGKHPIEDYD- 533 Query: 528 NQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTAS 587 + L + + + + Q+++ E Sbjct: 534 -----------LDNLRKSLISSKEAIKLRQDQVEKIRKEI-------------------- 562 Query: 588 LNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLL 647 ++ + +++++ L ++ E++ I A + + Q ++ L Sbjct: 563 --VSDKNINELEKILT---------ENYKRKDEIEKNIEALRENYKKKSQDKIDFKKKLD 611 Query: 648 TTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDEL 707 + +ED + ++ ++ +++++ L + L + L + Sbjct: 612 KIYHDLEVKKKKEDGLKRDAQDNKEIEIAYLSQKDKMKDLSK--ESLVDEKKILEKEILD 669 Query: 708 PHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQ 767 + T V ++ + + ++ + +++ K + +FD L+ + FD+ Sbjct: 670 LDKDITEVNRKYQNAELKIKEIQTKIENIKENIKDLDLRRDKYKEEFDKKLEEN-FDNIA 728 Query: 768 AFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ 827 ++ AL + + L K+ +E + L+ +++ +++ Sbjct: 729 SYKEAL---ENYSGLAGKKEGMEEFFNNLEKLMIS--------EENFASYKDMEVRDLDK 777 Query: 828 IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLI 887 ++ ++ + + EI +L + + + L + ++ E L+ + Sbjct: 778 LRGKIKSKEDERDIIRNQKSEIHTRLDNFSKVIARLKLLRKDYEMNMKENESLARLSKVA 837 Query: 888 GSKEGDK-------FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEAL 932 G F F D ++ LAN +L + ++ + R ++ L Sbjct: 838 DGSFGKVKGREKIDFETFVLTYYFDKVLKLANMRLLAMTDNQFSMVRKSDTTDQRSKTGL 897 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTL 989 ++E++D R TLSGGESFL SL+LAL LSD +S RID+LF+DEGFG+L Sbjct: 898 DIEILDANTGKM-RPVSTLSGGESFLASLSLALGLSDEISMENGGVRIDTLFIDEGFGSL 956 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 + L+ A+ A++ L K IG+ISHV+ +KE I +I V G SK+E Sbjct: 957 SKDYLENAVSAIEKLAYEDKFIGLISHVDELKEAIDAKILVFYEPSEG-SKVEVE 1010 >UniRef50_A1ZW09 ATPase involved in DNA repair, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZW09_9SPHI Length = 1028 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 179/1058 (16%), Positives = 405/1058 (38%), Gaps = 55/1058 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L L+ + S + + +IDFT+ +GLF I G G+GK+T+L++I ALY + R Sbjct: 1 MIPVKLTLQGVYSYQKKAEIDFTK--LTDSGLFGIFGMVGSGKSTILESISYALYGQVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ + +LM + E L + EF+ Y F + + ++ ++ + Sbjct: 59 LNKQDKVTYNLMNLKSNELLIDYEFKASDNEYYRFVVEGKRNSKNFEKIRTFDRSHYQMV 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+ + L Y F R++++ QG+F FL +R +L+++ G Sbjct: 119 KGEWTPTDKTA-----QDILELSYDNFRRTIIIPQGKFQEFLQLGDTDRTRMLKDIFGLG 173 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + + K ++ +++ + GV +T E + L+ L + Q Sbjct: 174 KY-DLGQKLRPVEKENDEKITQVETKLQGVAEVTEEGINEQRGILKELVASLEAQQNQLQ 232 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPHWERI 299 ++ L + L E + +++ L + + + + + E Sbjct: 233 EKSTKKTALEQIKALFAELAHQKEELARLKQQADDFNSLERRVKEYETCLYQFSDLLETH 292 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + +++ I++ T + + + ++ +++ + E + Sbjct: 293 KLTQVKIKQLQELIQQKETHFEQIQQKLVQDEQSFEEVKTQYNER-ETIKQKIDEFTKII 351 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE--------- 410 N + + +++ ++++ + ++ + Sbjct: 352 SINELNKELVTLEERVEKGKPVIKESEKKIVKLQTEIEDKTFFIKRQKENLPDNNVLLAV 411 Query: 411 ---VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 A + + + Q + +I +K +L + + E+ Sbjct: 412 SSWFAEKKKILSSIQKVNQETRHIEREIEKIRKEKKELYEEHLRDLLPEAHPKTIIGELA 471 Query: 468 QRYKEKTQQLADV----KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 +K +L D + L+ L G+PCPLCGS HP Sbjct: 472 DMILDKRDELKDKLMHTQHKLSGLTIKLKLQEYAENLSDGEPCPLCGSVHHPDPLKP--- 528 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 ++ A + ++ E L + ++++ + + ++ + ++ QA Sbjct: 529 ------DKIDAALHAFQEARETQDVQISLLTDLLDKVRQLKVQIDEKKKQLERRDEEAQA 582 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 ++ L + + D E + ++ LQ I +++ Q Q+ +E+ + Sbjct: 583 EANKFDLHLYKFNWKPAFD--PDHDEDVEKKKAKASRLQNAIDDADKEREQMQRSLEEER 640 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + L T A Q+ + + L T +++ + + A QL + +L Sbjct: 641 KKLDKYKTAIADLENQQLTKTTQLKTLKRQLRVFDLEDYAQHAA----SQLKQEIRSLED 696 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 E + + + Q + L S + ++ + Q+LQ Q++ L S F Sbjct: 697 LYERLERKYKNLETQINEDRNQKVRLESDLRNSRENLLQDEQNLQTNQSKLQDRLAKSDF 756 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D + L ++ + + Q + + + +A+ + A + Sbjct: 757 DTLETVENILQNKLDIERENQKIKEFQTKLHRAEDECHKLERQTAGK--------VYNEA 808 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 +Q+ ++ + ++ +G ++ ++++ + ++ L + + + +D L Sbjct: 809 EYQQVLTDIQSLKEDIQVKQDRRGGLKSEIERLESDLARKFKLQKHADALHLRRDDISTL 868 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 + F + + + NL +LAN++ RL + L+ + +E + D Sbjct: 869 KKMFRES---GFVNYISSVYMQNLCNLANERFYRLTKQ-QLKLEVNEDNTFYIRDYLNNG 924 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSETLDTALDAL 1001 R +TLSGG++F +L+LALAL+D + K+ + FLDEGFG+ D E+LD + L Sbjct: 925 QTRSVKTLSGGQTFQAALSLALALADNIQQFTKSNQNFFFLDEGFGSQDEESLDAVFETL 984 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 +L + +G+ISHVE+++ I V +KV+ G Sbjct: 985 TSLRKENRIVGIISHVESLQREISVYLKVRNQEETGSV 1022 >UniRef50_D1VDP9 DNA repair exonuclease, SbcC n=8 Tax=Actinomycetales RepID=D1VDP9_9ACTO Length = 1068 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 214/1098 (19%), Positives = 369/1098 (33%), Gaps = 91/1098 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L + GE ++D R + GL + G TG GKTTLLDA+ ALY P Sbjct: 1 MRPHRLELVAFGAFPGEVELDLDR--LGAGGLVLLCGETGGGKTTLLDAVGFALYGTVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV-----E 115 L + +E+ V +R + R + G+ + E Sbjct: 59 L-RGVRDLRSHHAAPDVAPRVRLEYSVPAGRFRVTRTPGWDRPRRRGDGTQRQHPTALLE 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + A + +D G+ +F + ++L QG+FA FL+A R LL++ Sbjct: 118 RWTGSGWAAEATRNEDVGHEVNGHLGMRPEQFFQVVMLPQGRFADFLHADNDAREALLKQ 177 Query: 176 LTGTEIYGQISAMVFEQHKSA-------RTELEKLQAQASGVTLLTP----EQVQSLTAS 224 L + ++ + ++ K A R +L+++ A+ + E Sbjct: 178 LFSVGRFERVEQWLADRAKRAADDHGLARQDLDRVHAKVTEAAGPPEAGDTEAAVPAGTE 237 Query: 225 LQVLTDE----EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 TDE + A + + R+DE QQ ++ L +A+ + Sbjct: 238 SATATDEPPAPDWARALAAGAAEAAQAADRRRDETQQVRDLAERGLAMTREAVRRAEERA 297 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHI----RQQIEEVNTRLQSTMALRASIRHHAAK 336 L P E +A AA R E Q+ A A AA Sbjct: 298 QLLRRLAELDEQAPQVEELAAELAAATRAGAVSRAIAETQRRAAQAAQAETAQAAARAAV 357 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 +A L A + + + L + Sbjct: 358 AAAALPDAGDPPRETADATADELAALAADAHAESGRLEPLALVLVAAHEDAALADLADRE 417 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 A + E+ T L + + G + P L + + ++ Sbjct: 418 ALEHAQAAAVREAEITTTLPARRQAAQEQADAARRAGHLAPA---LTERSEQLADLADAV 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 +R AL E + T+ A + +Q A L PCP+CG+ HP Sbjct: 475 RERRRALAESTEAAASATRARARAVELRQQ-RFDAITAELAAALADDTPCPVCGALDHPD 533 Query: 517 VEAYQALEPGVNQSRLLALENEVK-----KLGEEGATLRGQLDAITKQLQRDENEAQ--- 568 +A + R + ++ A L GQ+ + L R Sbjct: 534 PAEVRADHVSKDAERDADAAATRREAAAGTARDQVAGLTGQVRTLLAALLRSPAALADGP 593 Query: 569 ---------SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 ++ + + V L L D L +D+ + Sbjct: 594 RPGGGASDAAVAGADSSGDDAAATVAGMLADLRGTLLDEAVLLTDEDDL-----GAAGPD 648 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 +I A + Q L G A + + + LAT + E ++ Sbjct: 649 RTAAEIDAVARAFGAAAGQAASSAADLTGAQAGLAALVEAQTRAHADLATHRAEERAAGL 708 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 R R + + ++ V + + + + Sbjct: 709 RAAAARDRAARA----------LATVPSALRDPALLASRVDAV-ARFARACAHAEQAVRA 757 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A L++A A A + F D A LAA+ + L + Q ++R QA++ Sbjct: 758 AAQARDELRRADADAAEAATEAGFADPGAALAAVREPDWLADAQTRIQGHRDERIQARSR 817 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + +++ ++ A E + Q+ ++ Sbjct: 818 ---------LAAPELAAAADDPSARLDEHERAAAAAKAAHEEAWATAATAAQRARRLEAL 868 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGS-----KEGDKFRKFAQGLTLDNLVHLANQQ 914 ++ ++ L L + G + L+ + H A+++ Sbjct: 869 VEEYAGAHAALSPRRAAAAQLRQLADLAIGRAPANQHGMPLSSYVLAARLEEVAHAASRR 928 Query: 915 LTRLHG-RYLLQ--------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 L + G RY L R+ L + V+D W R T TLSGGE+F +L+LAL Sbjct: 929 LAAMSGGRYTLVHDTGERRDRRRKAGLGLLVLDAWTG-RSRPTATLSGGETFQAALSLAL 987 Query: 966 ALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 L+D+VS ID+LF+DEGFGTLD ++LD ++ LD L A G+ +GV+SHV ++ Sbjct: 988 GLADVVSAEAGGHAIDALFVDEGFGTLDPDSLDEVMNVLDELRAGGRLVGVVSHVADLRL 1047 Query: 1023 RIPVQIKVKKINGLGYSK 1040 RIP QI+V+K + Sbjct: 1048 RIPTQIQVRKGPSGSTVE 1065 >UniRef50_B4U8J8 SMC domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8J8_HYDS0 Length = 961 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 195/1041 (18%), Positives = 398/1041 (38%), Gaps = 88/1041 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ S K + +DF+ LFAITG TGAGKTT++DAI ALY + PR Sbjct: 1 MRPLVLELEGFLSYKEKTVVDFS-----DLSLFAITGMTGAGKTTIIDAITFALYGKCPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S+ D +++ + F + + Y +N V L Sbjct: 56 FEKGA-SKEDYISKGKDFFRVSLTFSLNDKTYTVGRYLKSGKN--------IVVSLKENG 106 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN-AKPKERAELLEELTGT 179 I +K K + E + +DY FT+ ++L QG+FA F+ P+ER E++ L+ Sbjct: 107 KEIITEEKNKLREERIKEILNMDYDTFTKVIVLPQGEFAKFIKPESPQERREIIMRLSNL 166 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 + ++ + Q K + E++ + + E V+ L L L E + + Sbjct: 167 DKIDKMRELAASQKKDLKNEIDSISLTIDNLK-SNQENVEELQKKLDSLEQELSVKTSEK 225 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + + ++ EL+ E S+ + ++EK + + +P +L+ ER Sbjct: 226 KVLLERFEKAKKKQELKNELSKLMIEYENLENQKEKMELIKKRIEFLKPKLSLKSDIERY 285 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + L ++++ N + + A+ +Q + + + Sbjct: 286 IKLKNELEKTTLELDKKNKEYFLKEQEYNKLLINFETIKADYEQTKYQEERVERGYKIIS 345 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 N + S T+D +R +QQL +++ + L A E + Sbjct: 346 ILENAL----SIESYITNDEARIRDLEQQLKTKKEEKSKLLAEIEHY---ENLSKEENKE 398 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 ++L A+ Q+ ++K + + + + +E N L + ++ + Q+L Sbjct: 399 AIEKDIENLTAIISQLELKEKEKDKKLLEQKKLMEEVDNINKELLKYKEEQRNLDQELNA 458 Query: 480 VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEV 539 K + + L+ CP+CG H Sbjct: 459 NKNNI----VLYYSNMLKTLLKENDICPVCGGVYHEKEHTTMLDI--------------- 499 Query: 540 KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ 599 E + ++ I ++ E+ +S ++ + L+++ +++ L Sbjct: 500 ----EVEEDIIKNIEDIKSKIALSEDRLKSKKEALEKLSEEIESLEKELL---------- 545 Query: 600 PWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQ 659 E E L + + + + + + + + ++ + +L Sbjct: 546 -------EKETLQSRLKELKQRREFQDNIQKNLEKLKSKKDKLENEILLLNKQKEGLEKD 598 Query: 660 EDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 ++ L T ++E S+ ++ L +N I Q L+ + + E Sbjct: 599 LYNKKESLKTLEKELLSYGVKEGHLQNKKNAIDQYKNKLDEIRNEIQNKRKIYEDTKEMI 658 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 + + L Q +L + ++ L + + + + + Sbjct: 659 NTYEKSIMLLKEQVSSLSVKKSTISEELNELETKLSSI-------------------EDK 699 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV-EQIQQELAQTHQK 838 ++ + LEN R + + + Q Q + ++++ L + Sbjct: 700 EKVLEELNRLENYERTYNEYMVKLSNLKEQIQLKENEIVNITEEAPPQELENMLEVLEEY 759 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 ++ G I ++ Q +N +Q + L + I + ++ + L + S D + + Sbjct: 760 VKTLNQEIGSISSKINQAKENEKQIKELEETIKDLEKKYNIYERLEQDLKS---DALQAY 816 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFL 958 ++ LV AN +++ YL + + + +V R ++LSGGE+F+ Sbjct: 817 ISQKIIEELVKYANVYASKMEFPYLFKVEEKSREKDSIVVEDAFGNTRPIKSLSGGETFI 876 Query: 959 VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS-GKTIGVISHV 1017 SL ALALS+ V + SLF+DEGFGTLD ETL+ +AL+ L+ + K +G+I+HV Sbjct: 877 TSLCFALALSEAV-GSKHLKSLFIDEGFGTLDKETLEKVGNALELLSQNINKMVGIITHV 935 Query: 1018 EAMKERIPVQIKVKKINGLGY 1038 E++ E+ P ++ V K Sbjct: 936 ESLAEKFPNRLIVTKTKDGSS 956 >UniRef50_C5PSW5 ATPase involved in DNA repair n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PSW5_9SPHI Length = 1012 Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 194/1044 (18%), Positives = 389/1044 (37%), Gaps = 42/1044 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + + +IDFT+ GLF I G G+GK+++L+AI ALY T R Sbjct: 1 MLPIYLSIEGLYSYQEKQEIDFTK--LTEAGLFGIFGNVGSGKSSILEAISFALYGNTER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L++ +++ +A +F A + + R A Sbjct: 59 LNSKENRSYNMLNLKSAAATIIFDFINFEN-----RRFRFAVHWKRKKKFDQTSTIERVA 113 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + V + +T L Y F R++++ QGQF FL+ K K+R+++++E+ + Sbjct: 114 YEWLQHNWVPMESADATHITNLTYQNFKRTIIIPQGQFKEFLDLKGKDRSDMMKEIFNLD 173 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + V ++E LQ SG + ++ L QL +A Q Sbjct: 174 KY-DLGPKVSLLQIENNRKIEHLQGALSGFEEINSGTIELKKNGLSEAKVLLDQLRSAYQ 232 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL-RPHWERI 299 Q + S L+ ++ +++ Q ++ + + + +L R +RI Sbjct: 233 QTENSYKVLSEAKANRENLKEKEEQFAQLKLKQPEILHLEKEMDEYEKLVSLFREPLDRI 292 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + +I+ + Q T K + + + + L + + Sbjct: 293 QSLQRDQDQLEIKIQNLLQEKQQTSLTLKEKELSFQKVEKDFR-KIEELRIKISDLKNLI 351 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 Q + + S+ L Q +++ +N L + + T+ Sbjct: 352 QIRTQQSEKSNLQSRLAKGTPILEQTRKEEQAFIADINLQETTLEQLKSVRIDTSELMEI 411 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAI--QNVTQEQTQRNAALNEMRQRYKEKTQQL 477 + R L+ + + ++ L +LQ + T + +E+ + ++ T + Sbjct: 412 DNWYQRHDLLLKNKSALIEKVDLLKLQQEELTNSFTVNGYTVDNWESEITNQLRQITTDI 471 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + K L L + CPLCGS HP Q + + L A + Sbjct: 472 KALTNQETDLQVQKELGRFADNLHHEEACPLCGSLDHPHP--MQIHDVSIQLGELKAKQT 529 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E+ + ++ +L Q+ + Q + + ++ ++ Q +Q + + DD Sbjct: 530 EITERQQQLQSLLSQMTRWSTSYQDKKIQLEAAAKELQQADEQLTELRTRFSWENFRWDD 589 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + + + + + + L + + + E+ + + Sbjct: 590 RTLFDEQKTALRQSEIQIKEAELLLKSLRVQLAETQSKAAKFERSLNEFTQQIAVIDGLI 649 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 Q + + S Q E+ + I + +TL + H V Sbjct: 650 TQHKMQIQAIQIEDYNHNSDQDLLAEIQNAEELIIRTEEQHKTLQAAINQLHTIVASVQG 709 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 + E + L Q+ + + A + Q Sbjct: 710 KHTEALENYQNTVQKIDKLNQEILAHIEQ-----------------QHLPGVRAIQLVLQ 752 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + + ++ + + + +TL Q E + E+ + EL + Sbjct: 753 KNLPVIENRKRIHDYKVAYETLQKQITELMQS-----SAVQDFDEALFERTKIELEEKKS 807 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 G + ++L++ D +++ L+ +++ + ++ L+++ +G F Sbjct: 808 AHELQIAHTGALERELQRLEDEFEKKGKLLTAFEKLSHRKDNLRTLDNMF---KGSGFVN 864 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + + L L +ANQ+ RL L +EA E EV+D R +TLSGG+ F Sbjct: 865 YVSSIHLQRLCDIANQRFHRLTKN-QLSLIINEANEFEVIDYLNNGYHRSVKTLSGGQGF 923 Query: 958 LVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SL LALAL++ + + D F+DEGFGT D+E+++T + L LN + +G+IS Sbjct: 924 QASLCLALALAENIQSLNKADKNFFFIDEGFGTQDAESMNTVFETLQYLNKENRIVGIIS 983 Query: 1016 HVEAMKERIPVQIKVKKINGLGYS 1039 HVE +KERIP+ + V K G Sbjct: 984 HVEELKERIPMSVTVIKDLERGSI 1007 >UniRef50_A4ENU5 Exonuclease SbcC, putative n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ENU5_9RHOB Length = 1024 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 208/1077 (19%), Positives = 390/1077 (36%), Gaps = 101/1077 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L+ IDF S GLF I G TG+GK+TL A+ AL+ + Sbjct: 1 MRPVQLTLQAFGPYPNHTVIDFRDA--VSTGLFGIYGQTGSGKSTLFSAMTFALFGVPAK 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + S + E F++ G+ Y ++ R + G + A Sbjct: 59 PEQDAPSLRSDHAAPDLQTKVEFIFDLGGKRYLVQRRPDQLRPKTRGTGETRSSHEAYLF 118 Query: 121 D--------------GKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 D GKI+A+K V++ + G +F + +LL QG+F +FL AK Sbjct: 119 DATGLSLDEINSGKCGKIIAEKKVREVDTAITGILGYSVEQFRQIVLLPQGRFESFLTAK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL--------TPEQ 217 +ER ++L EL ++ + A Q A ++ + +A L Sbjct: 179 TRERLQILRELFDVSLFEALMAKFKTQADQAEQQVREERAIYKRHLLAEGFEDHLDLANH 238 Query: 218 VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQ 277 + + L L E+ + + L R EL +A++ + + + + Sbjct: 239 LTAEVLHLSDLEQREEAALAKFDIATKELQKAERTAELFSQAAKYKTLFSNLDRRKAQIE 298 Query: 278 PQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ 337 + + A + +R+ + L + + + R + K+ Sbjct: 299 VLSEKVQKVEQASPILDAEQRLRDAHIDLETAQNALVKAAERAAQAQDATRIADKNLKKE 358 Query: 338 SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN 397 A +E + R + + + + E + ++ A+Q+L Sbjct: 359 EAR-----------CEEGETLRCNLEDLTRFEKLLATSAAGEEAAKTARKIQQQAKQELE 407 Query: 398 ALAAITLTLT-ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 L+ A + A R ++ + + + ++ A+ + + Sbjct: 408 KAEHQHAALSGARSAKAEALKLARIRMEQRQQIVIRLTALASHQKAAEAYEQAEEEIRTA 467 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + A L + + +K + + EQ+ + L+ G PCP+CG+ HP Sbjct: 468 EETAAQLQQEYEHASQKVESARQDLAVAEQKLSDEQALHLAQHLEDGAPCPVCGALEHPE 527 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 A +E +++ ++ G ++ +L + L + S + Sbjct: 528 PAAG-TMETADRDAQVQQARAHRERAGLNFQNIKDKLTRLEATLADRKKRLAS----MEL 582 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 ++ A A I L ++ + D ++ + Q + A +Q Sbjct: 583 PSESAAACVAKTAIEQLALKELGAEANIADAEAELEAFDAKLVQSQHGLEALRRQYETSS 642 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 Q + L L+ L L + QE Q+ + ++E AL Sbjct: 643 SQAAEATGTLAGMLSEIPLELRDTSVLAAKSKATAQELQALLKARSEAEALA-------- 694 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 RQ+ E + +++ ++ + +Q A F T Sbjct: 695 -----------------------RQLREDAIKSEKDRESAEKLLAASQDRIQSATHDFQT 731 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 L A+ + EQ L L+ L ++ +Q Sbjct: 732 RLSAAG-----------LTEQALADLKPAMSTLVVDKQTITAFWQDHKSAQDAAEQTALA 780 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 + +++ L R+ T + + ++ Q Q +Q+I + Sbjct: 781 VAGLSQPDLAALREVLTAALDHSRQVTEGRVSSQGRIAQLKKLTTNLQETIQKIEEFETA 840 Query: 877 VEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRK------ 927 L++L+ + + +A G D ++ AN +L + GRY L R+ Sbjct: 841 TGSLRELSALLNGQNEQRLTLETYAIGAMFDQVLEAANLRLGPMTSGRYRLDREIGGSGR 900 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDE 984 S L ++V D + R TLSGGESF+ +LALAL L+D V S K R+D++F+DE Sbjct: 901 GSRGLGIQVFDFHTGKS-RAANTLSGGESFIAALALALGLADTVESSSGKVRLDTIFIDE 959 Query: 985 GFGTLDSE----TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 GFG+LD+E TLD L L+AL + +++G+ISHV ++E IP V+K G Sbjct: 960 GFGSLDTENGSGTLDQVLQVLNALVSQNRSVGLISHVPLVQEMIPGGFHVRKGLGGS 1016 >UniRef50_Q5YQ97 Putative ATP-dependent dsDNA exonuclease n=3 Tax=Actinomycetales RepID=Q5YQ97_NOCFA Length = 1060 Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 176/1096 (16%), Positives = 365/1096 (33%), Gaps = 86/1096 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + +DF ++GLF + G TGAGKTT+LDAI ALY P Sbjct: 1 MRLHRLEMTAFGPFAQPTVVDFD--ALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 S+ + +E + G R S R + G + P+ L Sbjct: 59 ARGESKRLHSDHAPAQTPPRVVLEATLGGRRLRLTRSPEFERPKLRGSGMRTEQPKATLE 118 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 ++ D E L G+ +F + +LL QG FA FL A+ ++R +LLE+L Sbjct: 119 WLDGRGENLSRIPDIGEEIVRLLGMSADQFFQVVLLPQGDFARFLRAENEDREKLLEKLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL---------------------TPE 216 T +G + E+ +++ +LE+ + + + E Sbjct: 179 DTRRFGVAEQWLAERRRASAADLEQRKQGIERLIAQIRGAAGLSVTESVGVLECVDWSQE 238 Query: 217 QVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKA 276 + + L T + ++ L D+L++ + L + A ++ Sbjct: 239 LLATARDELAAATADAAAREQECAHLRKEAEELRTLDDLRRRMTAAHDQLTRYHATADQR 298 Query: 277 QPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAK 336 + A L A+ A+ + + H + L + +A+ + A Sbjct: 299 GARRAELEAARRAQPVTEAIDEARAAVMESRHRENEARTAARALATALAVPEAADLRADL 358 Query: 337 QSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL 396 ++ + + + + L Sbjct: 359 LVSDEGAVGPDSSREGAPVAETIGMTSALGSQEPEDTAAGRAAAGSETTDPHLRD----- 413 Query: 397 NALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 L +T + R ++ + L + + + Sbjct: 414 ----GADLDAAVRRWSTLIGALDAVRADATTAAESTAELANLRAEDDDLARRTAELIERR 469 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 ++ + +R +E A + + + R+++ + +L + Sbjct: 470 AALPESITAVDRRLREAGDAAAALPALAAECERLQSAASAAVELAKRRTA---------- 519 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + E +R + + + + Sbjct: 520 --------LDATRVEFETARAAHNDARERVLEVRER--RLAGMAAELASALVDGQPCAVC 569 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQ----- 631 +++ A + + + + +R+ + ++ L+ +I A + Sbjct: 570 GSREHPAPAEPADRAVSKEAEDAAVAAERAAEQRRDEIGARIAGLEREIEALIARGGDTD 629 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 ++ + A + E + + + + +A+ RI Sbjct: 630 RVELAAALRSATARYEDAADTAAQREAAQAELDRLRGEEARSHDDLRAAEARRSAVAARI 689 Query: 692 QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALH------SQQQTLQQQDVLAAQ 745 L +S +T V + ++ + T +Q + A+ Sbjct: 690 AATEDRLARATESLRRAAGADTDVEQRRTRLEALIDTATVLLRARAAVATARQHVTVVAK 749 Query: 746 SLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAE 805 ++ A D+ A + + +E + + A Sbjct: 750 RVENLAAAAGFVPDEVPEDEVARLTAFARVVNAAARPRPRQDEIEAELTA--ADRARAAA 807 Query: 806 TLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 + A + ++Q L Q+ ++ E ++++ + Q T Sbjct: 808 EAVLAEPEIQAAAAAEPGDLVAVEQALTHAQQRSNAAVAAKAEAGRRVQLLEELGTQLWT 867 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLHG- 920 + ++A + + ++ L ++ R + L+ + + +L R+ G Sbjct: 868 EVDRLAPLQRAHDELDRLADVVAGRGENNRRMSLRSYVLAARLEEVALAGSVRLRRMSGG 927 Query: 921 RYLLQRKAS-------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV-- 971 RY L +++ D + AVR +TLSGGE+F+ SLALAL L+D V Sbjct: 928 RYEFVHSDKAGPRGRRGGLGLDIRDDYTG-AVRPAKTLSGGETFMASLALALGLADTVAA 986 Query: 972 -SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKV 1030 S +D+LF+DEGFG+LD++TLD + LD L A G+ +G++SHV+ M++RIP ++ V Sbjct: 987 ESGGVVLDTLFIDEGFGSLDADTLDAVMGVLDELRAGGRVVGIVSHVDEMRQRIPSRLHV 1046 Query: 1031 KKINGLGYSKLESTFA 1046 + S+LE+T A Sbjct: 1047 IRGRDG--SRLETTVA 1060 >UniRef50_Q48FW7 Exonuclease SbcC n=12 Tax=Pseudomonas RepID=Q48FW7_PSE14 Length = 1214 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 311/1219 (25%), Positives = 493/1219 (40%), Gaps = 183/1219 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++RLKNL SL G ++IDFT EP AS GLFAITGPTGAGK+TLLDA+CLAL+ PR Sbjct: 1 MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR 60 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQPD 106 LSN+ QS+ L+ R T AEV+F + YRA W NRAR+ Sbjct: 61 LSNIGQSKVPDIDGDITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAT 120 Query: 107 GNLQVPRVELARCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 LQ R L ++L+++ ++ +L GL++ +FTR+++L+Q +F+AFL A Sbjct: 121 KKLQASRQILTDLDSEQVLSNQSKREFEQLIEHRLGLNFEQFTRAVMLAQSEFSAFLKAD 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA-- 223 KER+ELLE+LT T IY Q+ + + K A L+ L AQAS + L PE + L Sbjct: 181 DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPELLAELEQRL 240 Query: 224 ---------------SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQ 268 L++ +L + ++ + +TR + + S +Q L Q Sbjct: 241 NDAQQQLKAHQAQQRQLEIKQQWLIELHRLRDEQLAAQEAITRAQQAWDDQSGARQTLGQ 300 Query: 269 ALAEEEKAQPQLAALSLAQPARNL------------------RPHWERIAEHSAALAHIR 310 + ++L L R R + A+L + Sbjct: 301 LERLGPQRHRFARRVTLNAQLNPLAEQILQHQQQQASLQDQQRQLETRRTQAQASLLEAQ 360 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAK---------------------------QSAELQQ 343 Q LQ + ++ H A + Q + Q Sbjct: 361 QNHSSAKPLLQQAFDTQNTLNHLAQELAKVSDLHLQTGQLCTEGQASLHILLDQQQLVSQ 420 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + + L+ + WR + T L+ Q +L +Q+ + Sbjct: 421 RLERIAGQLEHSSELAPLAQAWSAWRDRLKSLTLIANRLKHGQSELPALQQRASTADQQL 480 Query: 404 LTLTADEVAT--------------------ALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 L + +Q+ + L L ++LA Sbjct: 481 TEQRNALELLYREADCEVDAVTEQVQILGSLLQDNRKQQRAFEDLARLWTSQQDVDRQLA 540 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTL--EAQRAQLQ 501 L Q+ Q++ Q N+ +R Q L + + E++ ++ E R QLQ Sbjct: 541 DLAQQQQSAQQQREQLNSEGIRVRDELTVAEQTLTVTRQLLERQRLARSASVEELRVQLQ 600 Query: 502 AGQPCPLCGSTSHPAVE---------AYQALEPGVNQSRLLALENEVKKLGEEGATLRGQ 552 QPCP+CGS HP + + E Q + L + +L E+ + + Sbjct: 601 DDQPCPVCGSIEHPWHQPEALLESLTQHDDNEQASAQKAVDQLTEQRNQLREQVGGVIAR 660 Query: 553 LDAITKQLQRDENEAQSLRQDEQA------------------LTQQWQAVTASLNITLQP 594 + +Q ++ Q+L D ++ L+QQ ++ + Q Sbjct: 661 QKELLRQHEQLTLRHQALAPDLESHPLAAQLLDHDPGKRDSWLSQQLNNLSEVITRDEQR 720 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHE-----LQGQIAAHNQQIIQYQQQIE--------- 640 + + ++QL+ ++ + + Q+ + + +++ Sbjct: 721 QEALLTLHKDAARLQKQLQAATEASQTAASHVAEQLKQLDVDRQRLDEELSAFTPLVSPH 780 Query: 641 --------------QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTA 686 Q +Q + L ++ E+ +++ Q R + T Sbjct: 781 VLEGLRSDASATVMQLEQQVTQRLDQLEQQHEEQQEQSERQQKIEKQQIEQQTRLHRQTE 840 Query: 687 LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 L + +L + Q+ E + + + + + Sbjct: 841 LAQEVARLGEQQQASQQALTGLLGEHATAEHWQQALENAIEQARQTESSAAEALQQIQSQ 900 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTL----------------------TQLEQ 784 L + A+ +A Q Q+ + + QL Sbjct: 901 LIQLAAELKSAQQQQQSLQQELAELDVQISEWRGQHPELDDTALDTLLTYDDAHVEQLRL 960 Query: 785 LKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTT 844 + QA+ L+ + + L QHQ D + Q+ L Q H++ Sbjct: 961 QLNATDKALEQAKVLLQERDQRLQQHQAQHSDLSDST-----QLAAALQQAHEQSALGEQ 1015 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 ++R +L +D R L +I + W L SLIGS EGDKFRK AQ L Sbjct: 1016 QCADLRAELSEDQRRRNANSELQARINDANDEYLRWARLASLIGSAEGDKFRKIAQAYNL 1075 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 D LVH AN QL +L RY L+R L + V+DT D +R +LSGGE+FLVSLALA Sbjct: 1076 DLLVHHANAQLRQLVRRYRLKR-GGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALA 1134 Query: 965 LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L L+ + S RI+SLF+DEGFG+LD E+L A+DALD L A G+ +GVISHV+ M ERI Sbjct: 1135 LGLASMASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERI 1194 Query: 1025 PVQIKVKKINGLGYSKLES 1043 PVQIKV++ G G S +E Sbjct: 1195 PVQIKVRR-QGNGLSTIEV 1212 >UniRef50_B5HAZ2 SMC domain-containing protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HAZ2_STRPR Length = 1117 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 218/1131 (19%), Positives = 364/1131 (32%), Gaps = 101/1131 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L L + +DFT + FA+ GPTG+GK+T+LDA+ ALY R Sbjct: 1 MRPVRLELNGFAGFRAPTVVDFTNADY-----FALVGPTGSGKSTVLDALTFALYGSAYR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ--------VP 112 + L + C + F+V + Y+ R Q Sbjct: 56 WGRSNAIAYAL-APTSNRCTVSLTFDVASQRYQVAREVRRVGQQIQQKTVSLVKFADPTA 114 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 V A ++LA ++K+ L GL + F + ++L QG FA FL+A ++R ++ Sbjct: 115 VVTDADGPQPEVLAGEIKELNAAIEQLLGLSFDDFCQCVVLPQGDFARFLSANARDRQQI 174 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L +L G Y I Q A E+ L Q S TP+ A L L Sbjct: 175 LLKLLGAAHYEGIGKRAGAQAAEAAKEIAVLTDQLSRHADATPQAEADAQARLSALGQLA 234 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQAL------AEEEKAQPQLAALSLA 286 + + ++ + L + +A A A Sbjct: 235 ATVDQLVPRVAEAHSRADDAHARVATLRTELARLTPLRTPDGIGELQRRAVEAQTAAHKA 294 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + A + A +A R + R L A Q+ Q Sbjct: 295 RDAADAAAQTLADATKAAQSGPQRAVLNIARDRYTEKAGLAGRRDAVIAAAQRARQELAQ 354 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLT---------HAEQKLN 397 S D + R + + L++ QQ L + Sbjct: 355 SEERLRALADAVTKARRTAEETRGRRDRVQQAYAALQRRQQMLAPVRTPDGASDLTSRAA 414 Query: 398 ALAAITLTLTADEVATALAQHAEQRPLRQHLV-ALHGQIVPQQKRLAQLQVAIQNVTQEQ 456 ALA A + L + + +L + ++ + T E Sbjct: 415 ALARQADAAATQLAAARDRHNQSASALTAAGDGSRLTEAREVLDQLLHVTSSLTDATSEL 474 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 A+ + +L E+ + R QLQ G CP+C + Sbjct: 475 DDAVEAVAQADSAVTGAQVRLDAATAALEEARTLAGAAQLRPQLQVGHACPVCEQSVTIL 534 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 Q+ A E + L + + A + L + Sbjct: 535 PPPLSDPALAAAQAARDAAVREHRDLLSQRQAATRTVAAKQRAADTLTQRRTLLDERLGT 594 Query: 577 LT-QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 L + + LD+ D E+Q R Q E + + Sbjct: 595 LLPDRPADTERDCDADRAHLDERAAARDQLVAAEQQARAAVQEAEAAH--TSATAAVATL 652 Query: 636 QQQIEQRQQLLLTTLTGYALT----------LPQEDEEESWLATRQQEAQ-SWQQRQNEL 684 Q++I++ + L T L A + ++W ++ + Q E Sbjct: 653 QREIDRTRSGLHTQLGALAELDPPAVDTHDVTAAWSDLQAWAQAQRSTVEDDLSAAQAEA 712 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 Q T LE Q+ H T+ ++ L + LQ A Sbjct: 713 ATSHQAHQDATATLEVAEQAHATAHSVHTIAVQQSAAADHAQSTLTDRLSELQTLLDQAP 772 Query: 745 QS-----LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 + L + + + A++ + + Q A E Q + ++ A+ Sbjct: 773 PADALPGLLEECDRLEAAVETATAEASQTREALKAAEAEQQQWQARTATAWSELTAARDA 832 Query: 800 VTQTA--------------------------ETLAQHQQHRPDDGLALTVTV-------- 825 V + Sbjct: 833 VAALKPPSLDTDDLAAAWASLAAWAIRAADDRQADTLRAQADAHTAHSEADQLLGQLEGL 892 Query: 826 --------EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + + + Q R + R +++ + + +I Q Sbjct: 893 LRDHDLDPQDLGDGSERAAQAPRVVAVAAERARGRVEMIQRSLADAAAIQDKIDSARTQQ 952 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASEALEVEV 936 + L L+ S +KF ++ LD LV A+Q L RL G R+ L E V Sbjct: 953 QVAAELARLMRS---NKFPQWLADSALDILVAGASQSLRRLSGDRFDLSHHKG---EFYV 1006 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSET 993 +D AD+ R RTLSGGE+F SL+LALALSD ++ T+++S+FLDEGFGTLD ++ Sbjct: 1007 IDHSDADSQRSVRTLSGGETFQASLSLALALSDQLAGMGGATKLESIFLDEGFGTLDPDS 1066 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 L+ D L+ L + +GVI+HV + ER+PV+ +V + E T Sbjct: 1067 LEMVADTLENLAQGERMVGVITHVTGLAERVPVRFQVHRDPHTSVVTREGT 1117 >UniRef50_D1X3K2 DNA repair exonuclease, SbcC n=18 Tax=Bacteria RepID=D1X3K2_9ACTO Length = 1020 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 195/1074 (18%), Positives = 350/1074 (32%), Gaps = 91/1074 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + ++DF +S GLF + GPTGAGKT++LDA+C ALY P Sbjct: 1 MRLHRLSITAFGPFGATQEVDFD--ALSSAGLFLLHGPTGAGKTSVLDAVCFALYGAVPG 58 Query: 61 LSNV-SQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 S ++E V G S + R + G+ +R Sbjct: 59 ARQSPGASLRSDHAPADLPTEVQLELTVGGRRLEVTRSPAQPRPKKRGDGFTLEKAQSRL 118 Query: 120 AD------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + L+ ++ E L G+ +F + +LL QG FA FL + + R +LL Sbjct: 119 RGHDPERGWQALSKSHQEIGEELTRLIGMSRDQFCQVVLLPQGDFARFLRSDAEARGKLL 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 L T + + + E + + + + + A + Sbjct: 179 GRLFDTRRFAAVEERLAELRRGGEARVTAADERILALAQRIAQAAGPAGAEATPIAARPG 238 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + + L W +E + E + + AL + L+ Sbjct: 239 EPG----LAEAVLEWAAVARSTARERLDIAHRV--LTGAEGRQRTARHALDTERELARLQ 292 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 +E +AAL R + + L+ ++ AEL ++ Sbjct: 293 ERYEETVRRAAALEERRPEHDRCQEELERARKADRVAPALELREEAELAHRRADAALDRA 352 Query: 354 EHDRFRQWNN----EPAGWRAQFSQQTSDREHLRQWQQQLT------HAEQKLNALAAIT 403 + + A +F Q+ E R+ + + ++ + T Sbjct: 353 RAQLPSDLADAGPDQLAELERRFRQELGGLESARRAEARSAGIDGERERLERESRADDAT 412 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + +A A HA R + LA + ++ + + L Sbjct: 413 VRDADAWLAGWDAVHAGLRERIATAQEAATRAERLAGLLAPARRRLEAARRRDALADELL 472 Query: 464 NEMRQRYKEKTQQLADVKT--ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 + + + L ++ + A L G PC +CGS HPA Sbjct: 473 AAGETLAEARERALDAHESWLGLRERRLRDIAAELAAGLVDGTPCTVCGSAEHPAPATEG 532 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 ++ E A L + ++ EA A Sbjct: 533 DGHVDRATEE--TALTAHRRAEETRARAEQALGLVRERHATAHAEALDAAAPAAADGSSA 590 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 P D + +D +R + H L A + + +++ Sbjct: 591 AVADGEAQGAPGPSVD-----ELRDTVDRLAAEHAAEHLLAAGTHAAREALDAAEREHAD 645 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 R +L A + + + E + + + A +R+ + +L Sbjct: 646 RLELRQEAERRAAARTSRREALDREQTALHDELAAVRGASGSVAAHADRLTRRVELLAEA 705 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 ++ E A + A + Sbjct: 706 AEAVRAERDAARRRKE--------------------------------ADDRLSDAAFRA 733 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 FD +A A L+D L+ + + + + Sbjct: 734 GFDTPEAAAATLLDAAAQRDLQHRIDAWQAEAAAVADRRAERDAR---------EAAEQP 784 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 Q LRE +++ Q+ + +Q ++ + + Q+ E Sbjct: 785 AARPSAAQGAFETAEWLLREASSALAAADQRCGELTRLSRQAADEVRMLGPVRQEYERVA 844 Query: 882 YLNSLIGS-----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE----- 930 L L + + + L+ + A +L R+ GRY L + Sbjct: 845 RLAGLAAGTSADNERKMRLEAYVLAARLEQVAAAATARLQRMSSGRYTLVHSDARTGGRR 904 Query: 931 -ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGF 986 L + VVD W RDT TLSGGE+F SLALAL L+D+V + R+D+LF+DEGF Sbjct: 905 AGLGLHVVDAWTGSE-RDTATLSGGETFFASLALALGLADVVTEEAGGVRLDTLFIDEGF 963 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 G+LD +TLD LD LD+L +++G++SHV ++ RIPV+++V K + Sbjct: 964 GSLDDQTLDEVLDVLDSLRERDRSVGIVSHVADLRRRIPVRLEVVKERQGSSVR 1017 >UniRef50_A5VKB7 SMC domain protein n=8 Tax=Lactobacillus RepID=A5VKB7_LACRD Length = 1033 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 195/1068 (18%), Positives = 384/1068 (35%), Gaps = 70/1068 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L++ L IDFT+ F LF + G TGAGKTT+ DA+C AL+ +T Sbjct: 1 MRPLTIELHYFGPY-EHQVIDFTQ--FTERSLFLVAGNTGAGKTTIFDAMCYALFGQTTN 57 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL----QVPRVE 115 + + E + + FE + Y+ + NL Q + Sbjct: 58 DRDRSAAALRSDFAPADQETMVKFTFEHQDLKYQIMRRPKQVLKGRRDNLVEHNQAVDLI 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +D K+K+ L L +F + +LL QG+F FL++ + LL + Sbjct: 118 YPLESDHPQKITKIKEADTFITDLLNLTRDQFKQIVLLPQGKFRQFLDSDSNTKEALLRD 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV---------TLLTPEQVQSLTASLQ 226 L T Y Q + + + + L + + + L T E + L Sbjct: 178 LFNTSRYEQWATQLKNDLREQKKSLTTQETKLQSLKETVTAIDAQLTTKEWLAEAKNYLS 237 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + L +QQ+Q+ ++ L Q +QE + + L + + + Q Q + Sbjct: 238 RLKANLEHLGDDEQQQQKKVDQLDAQLHTEQELKKNIEELAELIKVGKTLQAQAGEIQET 297 Query: 287 QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 + + ++ ++++++ + +++ +LQQ + Sbjct: 298 KQQVKVLEWYQEHQTEYQRWKDGEKRLQKLTLDNKFLHEDLRNLQKQQQTIETDLQQTSK 357 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 Q N+ + + +++ E +QQ L L Sbjct: 358 QQEEIDQLQTEVADLTNKLPFFDDRDKLKSAVDELQTNLKQQEKQQAASQKKLQDAQQQL 417 Query: 407 T-ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 T E + L ++ K L QL+ + + + + + Sbjct: 418 TVVTNNLKEHENLGEVQVYIAKQEGLQEKLTTAGKDLKQLETKLLSEKKNCAKLEQKQGD 477 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + ++ +L D+ + + +L+ PCP+CGS HP + Sbjct: 478 AEKLVQKSQGELDDLNDRFAR----HQIAILAQKLKPATPCPICGSLDHPHPASLADDGE 533 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 V ++++ A + ++ R +LD + +Q+++ + +L + + Sbjct: 534 LVTEAQVKAATVKAQQN-------RSRLDQLKEQVRQSVAQIANLTTQVETRQANLAELL 586 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + I+ E + L + Q+ + Q QQ ++ Q E+ ++ Sbjct: 587 GDNELPSDWEGQIESHAQKLAEMKTDLDRIEQQVKEWRQEEEELQQESKFSQ--EELDKI 644 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + + ++ + A+ + + + + Q +I+ LE+L Q Sbjct: 645 DESVNRCKQDLIAKQTILKEKAASLPAKFPTKEAADKRIQTDQLKIKAFNNQLESLQQQR 704 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + + Q E+ +QQ L + V Sbjct: 705 QENAKKLAGTNSRIDQTKEELATQTTQQDNLHRYLVNLLAQYD----------------- 747 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + + + L + R Q T Q + +Q ++ + Sbjct: 748 ------VQLKWNFWQEASEQVATLSSLREQVTTFENQVQDNQSQQERLTKAINSHPMPDI 801 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 Q +L ++LR+ G++ Q KQ + Q+ +++ ++ Q++ + L Sbjct: 802 TSTQTKLNAEREQLRQYQQEIGQLTAQYKQLEETDQKIIKAVEKTGKLDQEINELQTLTD 861 Query: 886 LIGSKEGD--KFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS--------EALEV 934 ++ + ++ +++ AN QL RL RY + LEV Sbjct: 862 VVTGNTENHVSLERYVLQAYFQDVLVAANIQLDRLTNSRYQFELATESHGAGAKWSGLEV 921 Query: 935 EVVDTWQADAVRDTRTLSGGESFL---VSLALALALSDLVSHKTRIDSLFLDEGFGTLDS 991 V D A R RTLSGGESF+ + S +ID+LF+DEGFG+LD Sbjct: 922 NVYD-DNAGRTRSARTLSGGESFMASLALALALCQIVQEQSGGIKIDALFIDEGFGSLDQ 980 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 + L+ AL +L L + IG+ISH+ ++E+IP Q+ V+ NG Y Sbjct: 981 QALEDALHSLQEL-EGHRMIGIISHITELEEQIPDQLIVRSRNGRSYV 1027 >UniRef50_A4F8B2 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8B2_SACEN Length = 984 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 192/1065 (18%), Positives = 377/1065 (35%), Gaps = 105/1065 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + +DF S+GLF + G TGAGKTTLLDA+ A+Y P Sbjct: 1 MRLHHLEVTAFGPYRDTQSVDFD--TLGSDGLFLLHGDTGAGKTTLLDAVAFAIYGAVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + +E V+G R S R + G Q + L Sbjct: 59 ARGEVKRLRCDTADPEVTTKVALELTVQGHRLRLERSPEYQRPKKRGEGFTTQQAKASLT 118 Query: 118 RC-----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 + ++ + L G+ +F + ++L QG+FA FL A ER +L Sbjct: 119 WLDAVPDGQPREGLSRIDEVARTMQRLLGMSVEQFFQVVMLPQGEFARFLRADTAEREQL 178 Query: 173 LEELTGTEIYGQISAMVFE----QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 LE+L T+ +G + + + + ++ ++++ + ++ ++ + L Sbjct: 179 LEKLFATQRFGGVEQWFVDRRRERGRELESQTQQVRELLARLSQVSGNEPAEDEDHPSWL 238 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP 288 + EK+ I + + RQ + + ++ + KA LA L+ + Sbjct: 239 EELEKRGIRELESTRTEHAQRGRQRDAAEAKLAERREFADKVRRVRKANADLAELASNRE 298 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 + + A+ + RQ ++ L+ + ++ ++ + + + Sbjct: 299 QHDAWRAEQDAAQRVLPVLTARQSVDRSAAALEQARSELSAAAAACSEVGDD-----EPI 353 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 + R+ A Q QQ +DR L + ++ ++ L A L Sbjct: 354 DRLRTLAGAHREQAGALAQLLPQAEQQEADRRRLAELADRIEADSRREAELTAQQAAL-P 412 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + +A A + E + L L ++ +L + + +E T + A Sbjct: 413 ERIAEARRELDESKQSELRLETLVPKLDDLSAKLTAAR-ELPAAERESTTASQAAQRAVD 471 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 +++ +L D++ L G+PCP+CGS HP + + Sbjct: 472 EHQQARDRLQDLRER----RLAGMAAELAGGLTTGEPCPVCGSAEHPDPRRPVDDQVSAD 527 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + Q+ + + + Q Q + + L Sbjct: 528 DE-----------------------ERAQAVEQQAQARREKAAAEAQRAQQACERLRERL 564 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 + D E + + + ++A + Q+ + + L T Sbjct: 565 GEHTEEQ-LTTELADLTAERDALRDKAGRSEQRTQRLADLEASTERLSTQVAEVRTRLAT 623 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELP 708 + ++ DE E+ L + E R+ L L ++++L + Sbjct: 624 SRAEHSSLSSTVDEREARLEEARGEFPGIGARREHLLDLAGKLERLVDA----RVACADA 679 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 R+ + ++ L +A ++ + + + A Sbjct: 680 ETRVEDQRNALREAATAAGFETVESAFAAERSDDRLTELSRALSEVEQRAAGARATLESA 739 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 L+ + + + E ++ + A +A + R D L + Sbjct: 740 ELSGVDPDAEVGLEEA------TEQATVAREAAERAAAMAHRAEQRHRDVAQLAERLRAA 793 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 +L + E + + + Sbjct: 794 WAQLGPAQAEYEELAALADVVNGRGQN--------------------------------- 820 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTW 940 R + L+++ A ++L R+ GRY R L ++V+D + Sbjct: 821 -ARKMSLRSYVLAARLEDVAEAATRRLQRMSDGRYSFVHSDAAGARGTRGGLGLDVLDDY 879 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTA 997 +R +TLSGGESFL SL+LAL L+D+V+ +D+LF+DEGFGTLD++TLD Sbjct: 880 SG-KIRPAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFIDEGFGTLDADTLDLV 938 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 +D LD L G+ +G++SHVE M++RI V+++V+K LE Sbjct: 939 MDTLDDLRTGGRVVGLVSHVEEMRQRIAVRLRVRKSRTGSTLVLE 983 >UniRef50_Q9CFZ0 Nuclease sbcCD subunit C n=4 Tax=Lactococcus lactis RepID=SBCC_LACLA Length = 1046 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 179/1082 (16%), Positives = 390/1082 (36%), Gaps = 91/1082 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + + +DF + +F I+G TGAGK+T+ DA+ AL+ T Sbjct: 1 MKPIYLEMNYFGPHENS-VVDFR--LLDESPIFLISGDTGAGKSTIFDAMTYALFGTTTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ F+ YR S + ++ G+ + A+ A Sbjct: 58 -DRDAKEMRSQFATADDRTSVTFYFKQGNLLYRIERSPEQKLSKKRGSGSTLQKSTAKLA 116 Query: 121 --------DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 + +A K+ E L L+ +F + +LL Q F+ FL + ++ + Sbjct: 117 IVDRVKGIEKNNIAINPKNVGEEITRLLHLNAEQFKKIILLPQNDFSRFLKSSTPDKEAI 176 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L+ + GT I+ S + ++ + + + + L E+ Sbjct: 177 LKRIFGTYIFTSFSNEIKAKNSEMNAVYLEYDRKQQNLYESSIWNPIELKELEDAAEQEK 236 Query: 233 KQLITAQQQEQQSLNWLTRQD--ELQQEASRRQQALQQALAEEEKAQPQLA-ALSLAQPA 289 L+T+ +++ + E +++ + A + AL E + + Q Sbjct: 237 LDLVTSLWKDRVARKNEIEGQTFEQEEKVISIEIAYKSALELENQFKNLNNLENDYQQNI 296 Query: 290 RNLRPHWERIAEHSAALA---HIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ 346 +E +E+ L +++ I E+ ++ + +++ +I ++++ + ++ Sbjct: 297 IEKSAIFEENSEYLKKLKWAFPLKESIHELEQDIKQSKSVKNNIAGIISEKAKDEILLKK 356 Query: 347 SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 N + + N F Q + + Q ++ + + + + Sbjct: 357 LTNEKEDLNKQQENINENKKVAEKIFIQI-QLSLQVEKKQSKVEELKLEQADNLTLLESF 415 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ------EQTQRN 460 A+ A Q + ++ + Q L I + + Sbjct: 416 KANLGQAAENISTLQDDVISDDYFINKREERNQLELTFRGKLIPTFQKVKHSKDDIVGLE 475 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQE---ARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 L E E L K ++ R + +++LQ G+ CP+CG+ HP Sbjct: 476 LKLKENTIALSENKDNLEKAKFAYNEKLKGRRRLMIAQLQSELQEGEACPVCGALEHPFT 535 Query: 518 EAYQA---LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 E + E G + + + L E+ L+ + L + EA ++ Sbjct: 536 ETIEESSYKELGNLLKEIDESQKKQTVLLEKNKQLQQLKTELKTSLDLKKIEADEFEKEL 595 Query: 575 QALTQQWQAVTASL--------NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIA 626 L ++ A + + +I L+ + + +++ L+ + ++ Sbjct: 596 SILYSEFIADYSQIFPDSFDEVSIDESLLNLTKSLELEEVKNDETKVKLADLESKKLELQ 655 Query: 627 AHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTA 686 + Q+ ++ + L +T +T + + R + + + L+ Sbjct: 656 EKVKDFEYSNQEFNRQIENLNAEITEIGITETSY----NLIRKRNRLMEKADLFEKHLSE 711 Query: 687 LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 L ++ + + + S +E +LE E+ S+Q+ Sbjct: 712 LMAQLSDIKIKISSQTASLNSFESQEATLLERISANKEKIKEKFSEQEA----------- 760 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 F + L + L Q+ Q + + + + + + + Sbjct: 761 ----------------FTTEFQILKEWAYDDDLIQISQKVEQYKADKARLKVEIKNIQQL 804 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 + Q + + + +Q + +KL + + L + +QQ Sbjct: 805 I---QNKKRPNLALIEEEKKQTNENYVFLQKKLVSAENEVEQAKSILSELKKVIKQQDKD 861 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL--TRLHGRYLL 924 + + +T+ S++ + + L+ ++ AN + RY Sbjct: 862 ASKKSAITKLYNAISGRA----SEDKLRLETYVVQNYLEKILDYANLHFINQLSNNRYRF 917 Query: 925 Q-------RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 + R+ L++ + D A R TLSGGE+F+ +L++ALALS++V ++ Sbjct: 918 ELAGEGNNRRMDHGLDINIYDNETG-AARSADTLSGGETFIAALSIALALSEVVQNTANG 976 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +I++LF+DEGFG+LD ETL A+ AL+ + + +GVISHVE MK I +I + K+ Sbjct: 977 VQIEALFIDEGFGSLDQETLQKAMQALEQI-GENRLVGVISHVEEMKATIGQRIIINKMG 1035 Query: 1035 GL 1036 Sbjct: 1036 DG 1037 >UniRef50_C6VSY3 SMC domain protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSY3_DYAFD Length = 1032 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 205/1062 (19%), Positives = 387/1062 (36%), Gaps = 58/1062 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L++K L S + E +IDF P LF I G G+GK+++L+AI ALY +T R Sbjct: 1 MIPKRLKIKGLYSYQTEQEIDFD--PLTDASLFGIFGSVGSGKSSILEAITFALYGDTER 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN---LQVPRVEL 116 L+ + ++M + + L + E A R ++ RN + + + Sbjct: 59 LNKSGDDRTYNMMNLRSDDLLIDFECIAGKNADRYRFTVRGKRNSKNFKDVKTFERKGYI 118 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + D LA+ E T ++ GL Y F R++++ QG+F F+ K ER +++EL Sbjct: 119 WQEEDWVPLAE-----NESTESIIGLSYDNFRRTIIIPQGRFQEFIELKDAERTRMMKEL 173 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E Y +S V L + Q G+ +T E + L+ + + +Q+ Sbjct: 174 FQLEKY-DLSRNVGSLSNRNNLALSNVDGQLMGLGEVTQEMLAESEQRLEQIRLQIQQVS 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP-ARNLRPH 295 + + + L + ++ Q L ++ Q + AAL + + + + Sbjct: 233 AELNVQTELESNLQKLKLAGEKTQMLQNRLATLDSQRAAMQEREAALKTFETCSLHFKSI 292 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 +++ A+A + +L AL + +++++ L T +E Sbjct: 293 FDQKNNLLTAIARDERISSANQAKLTELAALLEKQQETLQMLKPRFEKREELLATA-EEL 351 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE----- 410 ++ + + EHL++ + + +Q+ L A A Sbjct: 352 EKVIRIIEHSQSVIKRKDALQRGEEHLKERENAIELQKQQKQELEAANEQRKAGLGDVLE 411 Query: 411 ---VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ-LQVAIQNVTQE-------QTQR 459 V + + + RQ + + + K L + L +Q +T E + Sbjct: 412 MGLVKSWFVKTDDLMADRQSIKTEAETLAAEIKTLTEGLTQRLQEITGEFGIPFDGEMLL 471 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + + ++ L L+ G PCPLCGS HP V Sbjct: 472 ENFQKRITSYLETCETDRRELNRQLLHINTRVALHRYAGNLEDGAPCPLCGSLHHPEVLI 531 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 A+E + L E+ LR + ++R N+ ++L + + ++ Q Sbjct: 532 ADGALSAET----AAIEKRLNALDEKERLLRK----LQSPIERVFNQIENLERQKTSIKQ 583 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 ++ A L + + + E + ++ +QG+I A + QI Sbjct: 584 RYADAQAKLKAHDEGFAWP---AFNKADREGFDKRFAESSRVQGEIKAGETILKGLTAQI 640 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 E L L +E Q R + ++ + Sbjct: 641 E---AALTEKAEKIEKPLQVLKDEILRFENTVQTLSEQLSRVSLADFANADKADISLKIN 697 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 L + + ++ L Q + L Q + D L Sbjct: 698 ALRTDYTQLSAAFADAEKQADALEKERNTLSGSQAAMLTALEGNRAELVAVQVKIDEQLT 757 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 A F+ + L + Q + E A Q Sbjct: 758 AYAFESEAQVAEILQKPLRIETERQAIDEFRLALETTNAELKNMLEDHAGEQ-------- 809 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 E++ + L +G I +LKQ A++ ++ L+ + A++ + E Sbjct: 810 YDAARHEEVIALKIALTENLNAQRKEEGNIGGRLKQMAEDLAKKAALLAEKARLQLRKEH 869 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDT 939 L L S F +A + L NL+ AN + ++ + L + E V D Sbjct: 870 LDDLAKLFRSS---GFVDYASSIYLQNLIQAANHRFHQMTHQ-QLHLELGEGNSFWVRDL 925 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLV--SHKTRIDSLFLDEGFGTLDSETLDTA 997 +R +TLSGG+ F +L+LALAL+D + ++++ + FLDEGFG+LD L T Sbjct: 926 LNGGHMRLLKTLSGGQKFQAALSLALALADHIHVRNESKHNFFFLDEGFGSLDKNALQTV 985 Query: 998 LDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 + L +L + +G+ISHVE +++ I +++ + Sbjct: 986 FETLKSLRKENRIVGIISHVEDLQQEIQTYLRITESEEGSRI 1027 >UniRef50_B0K215 SMC domain protein n=11 Tax=Thermoanaerobacteraceae RepID=B0K215_THEPX Length = 1180 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 215/1197 (17%), Positives = 449/1197 (37%), Gaps = 173/1197 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L++ LNS E IDF E GLF I GPTG+GK+T++DAI L++Y + PR Sbjct: 4 MRPLKLKIAGLNSFVEEQIIDF--ELLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPR 61 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK----GEAYRAFWSQNRARNQPDGNLQVPRVEL 116 S D + + +FE+ + Y + R + R+ Sbjct: 62 NS------KDFINTQSTSMSLTYQFEIGVDGARKRYIVERNVKRDAKSGGYKTTLARLRE 115 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + ++LA+K ++ + L GL FTRS++L QG+F+ FL KER ++LE + Sbjct: 116 IGESGERVLAEKDREVQQKIVDLIGLTAEDFTRSVVLPQGKFSEFLKLTGKERRDMLERI 175 Query: 177 TGTEIYG-------------------QISAMVFEQHKSARTELEKLQAQ---ASGVTLLT 214 G E YG +++A + + + LE L+ + Sbjct: 176 FGLEKYGSKLLVRIRDVKREKSNLLNEVNAKLSQHEGVTKEALEDLKKKFEILKEEEKTL 235 Query: 215 PEQVQSLTASLQVLT---DEEKQLITAQQQEQQSLNWLTRQDELQQE------------- 258 EQ L + L +++++L +++ L ++ +++ Sbjct: 236 KEQKDKLDKEREKLKGIWEKQQELNQFLHKKEVLDQQLKEIEDKKEKLKKAEKALSVKPY 295 Query: 259 -----------------------------------ASRRQQALQQALAEEEKAQPQLAAL 283 + +L++ + + L Sbjct: 296 IDSLVETEKKLILNQKDVEKYSKELEEAEKLLEKVEKEYEASLKEKEEKIPLIIEKEERL 355 Query: 284 SLA-QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 A + ++ + +++QI+ + +++ + ++ + Sbjct: 356 KRAFKLRDEIKKINSEREKLVKEYKDLKKQIDGIEREIKALSDSIDIAKRQLGEKEKRIN 415 Query: 343 QQQQSLNTWLQEHDRFR---QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 + + N + F ++ + + + +E + + Q+ + + L Sbjct: 416 EIKVDSNKREKIFAAFEIQKEFERADKEKKEKEKRILELKELIGKQQKDIEKIDNLLKRK 475 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRL------AQLQVAIQNVT 453 + + + + L +L + V + + + ++ + Sbjct: 476 EKEIQEVDNNIKKLEMQKPPTNEDLLDLQKSLERKRVEILELKEKEKLKNEAENNLKEIL 535 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 + + + N + E+ ++ K K L +VK E+ + L+ G PCP+CGS Sbjct: 536 KIKEEINNEIKEIEEKLKNKNNSLEEVKKDIEELVKNNMAGELAEGLKEGVPCPVCGSIH 595 Query: 514 HPAVEAYQALEPGVNQSRLLA--------------------------------------- 534 H + + + + A Sbjct: 596 HVRLAQKVEEDLIKEKQEIKANLEKDIMDYQSKLFKLKGELSGIEVKEEMYKKEYDKLWD 655 Query: 535 ---------LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 LE E+ K+ + + +L+ K + E + L++++ +L + + Sbjct: 656 ILKDINLLKLEEELNKMESDFIQWKEKLEKWNKSKEGLETLIKKLKEEKASLDLEHTRLK 715 Query: 586 ASLNITLQPLDDIQPWLDAQD----EHERQLRLLSQR------HELQGQIAAHNQQIIQY 635 +N + L + + L+A E E QLR+ + E +I ++I Sbjct: 716 EGINKDISLLKEFESSLEAISITYSELEGQLRISREELGISDFKEKVEEINQKEREIEGL 775 Query: 636 QQQIEQRQ---QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 + +IE + + L + L + + +E + + + + + Sbjct: 776 RNEIENFKNTIEELTNKKETLSNNLNALSIRKGQIEEIGKEKSKNLRERQQEFDSLSEGR 835 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 + L+ + + E E+V+ E + + + S++ + + L ++ Sbjct: 836 DIEEYLKEIQYNKEKITKMESVLKETLEKARKDKQNIESKKISACKSRDLLNNMFREQSE 895 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 + + AL F D++ L L+D + + ++E+ +N EN+ + + E L + Sbjct: 896 KLENALLEKGFKDKKEALEYLLDSENIKKIEEEIKNFENEYVSVNKSIDRLMEILKGQKI 955 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + Q+++ + Q L E G + + +N Q+ + +Q + Sbjct: 956 N--------EEEWNQLEESIKGLEQVLNEKRKEIGATEKAISDMQENLQKVEEFTKQKKE 1007 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEA 931 + + V+ L++L +G+KF F L + A+++L + GRY L+ + Sbjct: 1008 LERVVDILNELDNLF---QGNKFVDFIAARQLKYITFFASKRLKEISRGRYALEIDSDNN 1064 Query: 932 LEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTL 989 + D + R TLSGGE+FL SL+LALALS + + ++ FLDEGFG+L Sbjct: 1065 --FVMRDDFNGGVRRSVDTLSGGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFGSL 1122 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG-YSKLESTF 1045 D+E LD + +L+ L +G+ISHV+ +K R+PV++ V G SK+ + Sbjct: 1123 DAELLDIVMTSLERLKKDKMVVGIISHVDELKGRVPVKLIVTPPAVSGEGSKVRIEY 1179 >UniRef50_A6LS35 SMC domain protein n=3 Tax=Clostridium RepID=A6LS35_CLOB8 Length = 1163 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 206/1182 (17%), Positives = 446/1182 (37%), Gaps = 159/1182 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E IDF + G F I GPTG+GK+T+LD I LALY R Sbjct: 1 MRPIKLRIKGLNSFMDEQIIDFDK--LTDRGFFGIFGPTGSGKSTILDGITLALYGNVSR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 S+ + + + EF++ G R + + + DG + + ++ Sbjct: 59 KSS------NFINTNCDRLNVNFEFQISGSEIRKYIIDREFKRKKDGGISSGKCKIVEVT 112 Query: 120 -ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 ++ +ILAD VK + + GL+ F+R+++L QG+F+ FL + K+R ++LE L Sbjct: 113 SSEEEILADGVKTINKKVEEIVGLNLEDFSRTVVLPQGKFSEFLKLEGKDRRDMLERLFN 172 Query: 179 TEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + +G +S + + RT+ L Q SG + ++ E+++ +L+ L + + L Sbjct: 173 LQQFGDNLSRKLSAKISKERTDSNILAGQLSGYSDVSQEKLKEKENALEELKNNLEALKK 232 Query: 238 AQQ-------------QEQQSLNWLTRQDELQQEASRR---------------------- 262 + Q L + +++ +E Sbjct: 233 ELDIIEKKHKENEEIWKLQLDLLYYKNKEQTLKEKEENINSYIEKIKLGEAGAKVLPYLN 292 Query: 263 -----QQALQQALAEEEKAQ-------------------PQLAALSLAQPARNLRPHWER 298 ++A + E E+ + + + + Sbjct: 293 AFESTRKAFDKNEIELEELKSKIGKIKEEKEKIEQLWCMAKDKKENKLPQLMMQEQKVKD 352 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 E + I +I+ + +++ A +I+ K E+ + + + + +D Sbjct: 353 AIEEKNLIREIENKIDLLKAQIKECDAKNNNIQSELIKIEEEISNKNKLIKEDEKTYDNL 412 Query: 359 RQWN-------------NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + + + + + + + + L + Sbjct: 413 KIEESLKEAVQEGIIVEEKLEKINGILVKDKQKKAVIEKENSETILKGKALREVLDKEKK 472 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA---QLQVAIQNVTQEQTQRNAA 462 D+ ++ LV L IV +++ + +L I +E Sbjct: 473 SLEDKDKQYEFLLKNSPGEQKDLVNLKQLIVENEQKWSSYVKLNKEIDFSREEIKNLQID 532 Query: 463 LNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH--PAVEAY 520 + R+ K+ ++L ++K + R R +L+ G CP+CGST H + + Sbjct: 533 ILSRREEEKQLEKELEEIKNTQREVMRENLAHTLRQELKDGDTCPVCGSTHHMKENIRIF 592 Query: 521 QALEPGVNQSRLLALENE----------------------------------------VK 540 + + + ++ EN ++ Sbjct: 593 EVQDVKNVEEKIKLKENSIKIISSKITQGETKVNSFNEKIKVNLEEIEKLGTAFNEKPLE 652 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 +L +E L L++ +K + E LR + T + + A + + L+D++ Sbjct: 653 ELKQEFINLEKALESYSKAKEELEKSVNKLRNEINIKTGEINELRAVVRTNQRQLEDLEK 712 Query: 601 WLDAQDEHERQLRLLSQRHELQ----------GQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 + E L+ + +I A ++ + + I+ ++L+ Sbjct: 713 SITENTEELNILKNRLDSLRAKTLVTDFNKKSEEIKAVEKERERLSEVIKVNRELIEKLE 772 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI----QQLTPILETLPQSDE 706 + + L E ++++ + E L +L + ++ E Sbjct: 773 KNKENLTSEVILAKENLTRYNTELSNYEKSKEEKIQAIKNKVDNTDDLVSLLHKIQENIE 832 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 + E N ++ ++ + + + + ++ + +AQ + A+ + F+ Sbjct: 833 NINSEFKESENNKNKIEKEFNENNERLISAISKYKELSKRKKDEEAQLEVAIDSEGFNSL 892 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 ++ ++ + + ++ +++ + + + + + Sbjct: 893 DDVKKNIIGKEEINDYKLKVESYKSEVSKVNGAIESLLNKIDGKELSEKE--------YT 944 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 +I+ ++ E + ++ ++LK + ++Q+ L+ + ++ ++ G L L Sbjct: 945 EIKLLKDIKEKEFNEINEDKIKVDEELKNIKNKLEEQKDLLDKKMKLEHKLALLGDLEKL 1004 Query: 887 IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEALEVEVVDTWQADAV 945 +G KF +F L + A+++L + HG Y L+ + + D A Sbjct: 1005 F---KGKKFVEFVAVSKLKYVSVEASKRLKEITHGNYGLEVDDNS--RFIIRDYKNGGAK 1059 Query: 946 RDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 RD+ TLSGGE+FL SL+LALALS + ++ FLDEGFGTLD + L+ +++L+ Sbjct: 1060 RDSTTLSGGETFLASLSLALALSAQIQLKGTAPLELFFLDEGFGTLDDDLLEVVMNSLER 1119 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGL-GYSKLEST 1044 ++ +G+ISHVEA+K R+PV++ + G SK+ Sbjct: 1120 IHNEKLKVGIISHVEAIKNRVPVKLMITPAESGMGGSKVRIE 1161 >UniRef50_B2GF12 Exonuclease SbcC n=3 Tax=Lactobacillus fermentum RepID=B2GF12_LACF3 Length = 1034 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 205/1066 (19%), Positives = 388/1066 (36%), Gaps = 64/1066 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L + + IDFTR F ++ L+ I G TG+GKTT+ DA+C+ALY Sbjct: 1 MKPLKLTMHYFGPYED-TTIDFTR--FDASPLYLIAGDTGSGKTTIFDAMCVALYGNASN 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVP-----RVE 115 ++ FE KG Y+ + + G + + Sbjct: 58 ERRSAEMFRSDFATPKQVTEVTFLFEHKGVTYQVYRRPRQVLTMTRGKGEKQYDPKVSLV 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 A+ K+ + + L G++ +F + ++L QG+ FL A K + E+L Sbjct: 118 YPVGAENPRELTKITEVNQFVQDLLGVNASQFRQLIILPQGEVQRFLMADSKTKEEILTT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLT--DEEK 233 L T++Y + E+ KS R + + + +Q + L + D Sbjct: 178 LFQTQLYTNWVTKLDERAKSMRDQTQDITSQLKVLMGQVDGVSDQLELDQWQVAVGDLLT 237 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + + + + + + Q ++ L + A + Q L P Sbjct: 238 EKKAELRAVTEQVTTAQKAADQLQAQLTAERRLAEDHAALVSCETQQLELKERAPQIKRL 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 + + + T+L +A+ A +Q+ Q + Sbjct: 298 ADENEETAWAQQHQTAYHEWQAGTTKLADLTKQQAACEQKQAAVKVRVQELTQVAERLKE 357 Query: 354 EHDRFRQWNNEPAGWRAQF---SQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 + ++ + A R + + + + L + ++ E+ ++ + L A+ Sbjct: 358 QEPAVQERQRQVANIREKLPLFEEVAALSKRLEKERRAQVEQERTVSDQTSALTKLQAEL 417 Query: 411 VA--TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 L + + Q+V Q+ + L + + ++ ++ + Sbjct: 418 DRVDQELQAAPDLTQAAVTIATRVQQVVRWQQAVTALGEQAKELANQEQALRDLNAQLAE 477 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 K AD+K ++ + ++L+ G+ CP+CGST+HP V V Sbjct: 478 AKKTAQAAQADLKEK-KKARLAAMIATLASELEEGEACPICGSTTHPHVATAVQTGQEVT 536 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + L + +V K ATL + QL++ + + + L Q + L Sbjct: 537 EVTLDTAQAKVTKAETTLATLTTRQANQDSQLEKGR---ATFQDELATLCQAVASPAGDL 593 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 + + LD + + ++ E Q + + +QI Q + ++ Q + Sbjct: 594 EAVTAAVAEAVAALD--HDRQELQNAQAKETENQQRQVSLTKQIQAGQAKYQELQAAVNE 651 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELP 708 T +Q +L A + L+ Q+ Sbjct: 652 GRLNVNQT-----------------QTELVNKQGQLPAELPDLASAERWLKEEEQALADF 694 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 ++T + + Q L + Q L A + + + + AL + Sbjct: 695 ASQQTQNQDALSRAQTQLTQLTTTSQQLADSAKATAAEVDQRKRELTAALAERQAAWEVF 754 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 A L ++R+ + A Q Q+ VE+ Sbjct: 755 ERAL-----------ARVPELAARQREVNDYRQRLASLADQRQRLVEQIAGRPKPDVEKT 803 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 +L + KL + + E L + + +QQ + + +Q+ + L +L+ Sbjct: 804 AGQLKKAQVKLDQLKGAVIEQGNALTRIKEIKQQVEKKAAKQGDTERQLRELSSLCALLK 863 Query: 889 SKEGD--KFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQRKASEAL-------EVEVV- 937 + G +++ Q ++ +ANQ L +L HGRY + +E+ Sbjct: 864 GQGGTQLGLQRYVQRHYFTEVLAVANQWLAKLTHGRYQMHLDGEADFKGRQNKNGLEIYA 923 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETL 994 D A R ++LSGGESFL +LALALAL ++V I++LF+DEGFG+LD + L Sbjct: 924 DDDYAGKARKVQSLSGGESFLTALALALALGEVVQRHHGGVEIEALFVDEGFGSLDQDAL 983 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 LD L +L + IG+ISHV ++E+IP Q++V NG K Sbjct: 984 GEVLDTLQSL-DGNRMIGIISHVTELEEQIPDQLQVIAENGRSKVK 1028 >UniRef50_D2QSS5 ATPase-like protein involved in DNA repair n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QSS5_9SPHI Length = 1029 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 200/1061 (18%), Positives = 398/1061 (37%), Gaps = 60/1061 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + +IDF + + +F I G G+GKT+LL+AI ALY ET R Sbjct: 1 MIPIKLSIQGLYSYQDLQEIDFQQ--LIGSSVFGIFGKVGSGKTSLLEAISFALYGETER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVK--GEAYRAFWSQNRARNQPDGNLQVPRVELAR 118 L++ Q ++M + + + +F+ + Y+ + R + R R Sbjct: 59 LNSRDNRQYNMMNLKSKHLIIDFQFQAGPEQQLYKFVYEAKRHPKKHHEIGPGERRMFIR 118 Query: 119 CAD-GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 D + + ++ +D L+ + GLDY F R++++ Q QF FL P ER +++ +L Sbjct: 119 QGDEWQPIGNEKEDIAVLSKQILGLDYDNFKRTIIIPQNQFREFLELSPTERTKMMNQLF 178 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + Y ++A V + K+ +L +L+ S + +TPE ++ + V+++ + Sbjct: 179 KLDQY-DLAARVSKLSKANDDQLAELRGLLSPLEAVTPETIEQAKTDITVISESLSRKEA 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + L + Q QQ L Q L Q + AL++ + Sbjct: 238 EINDLSPAEKRLLENQQRSQTLVSTQQELTQVLNRAPLYQQREQALAIYET------CLL 291 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 A L + + + + Q+ + + + +Q+ T + + Sbjct: 292 VFQADFANLDKLNSRKTRLIEQEQAAQRQLLFVTKRLVGLRSLYEAAKQAYETRDELQQK 351 Query: 358 FRQWN--NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA- 414 + + + + QQT +R+ L ++ A A + + + Sbjct: 352 IDELDTVQQIRTLQQTIGQQTRNRDTLASQLHHQATLIERHKATRAKHRLILDNGIGRTS 411 Query: 415 -LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ-------------RN 460 L + + + L Q Q + AI+ + Q++ Sbjct: 412 DLERLYKVKNWFTAYKPLKKQADDLQLAVDNYDRAIEKLKQQKNDALLGFPPDWTDLTLK 471 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 + + + ++ + D + + L L GQPCPLCGST HP + Sbjct: 472 TLPDAIEEALEKFKEVREDREDKHRKLLVQDELRKYADALNEGQPCPLCGSTHHPN--RH 529 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 + E ++ A +V + E + L+ + +T +L+ + + + L Q+ + +Q Sbjct: 530 KGDEESIDVKGSEAGLQKVIQRIEVTSKLQLAIKELTTKLRSEHDNGKRLMQERTEIVRQ 589 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIE 640 + + ++A + + + + + + + Sbjct: 590 LTEHEDNFMWPEFSKEQEGEVINAIQKESDAQKQILDAQKAIQDLEKLIGEAEAAHNDLN 649 Query: 641 QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 ++ + G + L E + + Q + +L +Q + Sbjct: 650 KKVVDAGNAIAGLSGQLKTAAESLEHFRLEEVKNWGLDQIADLRESLTKTYRQAKIHFDD 709 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + E+ E +Q H Q + ++Q+ L+ + + Q LQ+ Sbjct: 710 TAKQQGEAEKEQATAEEQIQQFHNQLAEIVAEQEGLEVTIAQNLANQNLTRKQVKQILQS 769 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 ++ Q+ Q +R Q V LA+ Sbjct: 770 NLNIGQE---------------RQQINEYNEKRSSLQGQVDTLQTELAEQ--------PF 806 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 V + +QQ+LA + G L QQ+ ++ ++ + +D Sbjct: 807 DPVELATVQQQLATLQTEKDALNKEHGRATSVLAALESQWQQKLEHQKRHDELDLRKQDL 866 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTW 940 ++ + F + + L NL AN++ +L L+ + + V D Sbjct: 867 KKMDEMF---RAQGFVNYVSSVYLKNLCESANERFFKLTNN-QLRLELDDKNNFLVRDFL 922 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSETLDTAL 998 + VR +TLSGG++F +L+LALALSD + H K + + FLDEGFGTLD ++L T Sbjct: 923 NSGEVRSVKTLSGGQTFQAALSLALALSDNIQHLTKAKQNLFFLDEGFGTLDKDSLQTVF 982 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 L AL A + +G+ISHVE +++ + I+ + Sbjct: 983 KTLKALRAENRVVGIISHVEELQQEVEHFIRAESTENGSRI 1023 >UniRef50_B5IJR2 SMC domain protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJR2_9CHRO Length = 1021 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 221/1098 (20%), Positives = 376/1098 (34%), Gaps = 140/1098 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ I F +GLF I G TG+GKT LLDA+C ALY E Sbjct: 1 MRPHLLEMEAFGPYAEPVTICFD--TLCRDGLFLIHGSTGSGKTYLLDALCFALYGEVSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR-----VE 115 + A +EF G +R + G + + Sbjct: 59 -ERSLKGLRSDHAPPQALPQVSLEFSAAGGRWRVERQAACEVPKSRGQGTTSKGAKAGLW 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + + +A V++ A L GLD +F + +LL QG+FA L A+ ++R LL+ Sbjct: 118 RLLGGEPQPVAAGVQEVGREVARLVGLDAAQFRQVILLPQGRFAEVLRARDEDREALLKT 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ---------------- 219 L T +Y + + Q K+A EL + Q Q + + Sbjct: 178 LFDTSLYERAMGWLAGQAKAAEEELRERQRQQRHLLEQIAAAWEPWQREGQSSEKPPGEA 237 Query: 220 ----------------------SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQ 257 ++ A Q + Q Q L L + EL Sbjct: 238 PEEASPDLPSELLPEHLPTVQGAMEALQQQAALHLDRAEARFLQAQAGLAELRSRAELWD 297 Query: 258 EASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN 317 R Q LQ+ ++E A L+LA+ A +R A+ + + Sbjct: 298 RRQRAQARLQELAQQQEPMVALQARLALAERAETVRASMLSEADARQRREEAETRCRQRL 357 Query: 318 TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS 377 RL+ + L T L + + + Sbjct: 358 ERLRRQRDAADQAPDAVMALGLLELPEPARLTTALNALAVRQGELEQVLALAERRRGARR 417 Query: 378 DREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 + E RQ Q+ + L A + L + + L Sbjct: 418 EEERARQELQEANGRIARGQELLAQEQSRLDGLQQPLLQARSARDGL-----TGLELAAR 472 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQR 497 Q R++ + ++ Q AA+ + D++ Q Sbjct: 473 QAARISTALQQQEEAVRQLQQATAAVLAAEAAQHQARTHQLDLRERQLQ----GMAARLA 528 Query: 498 AQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT 557 A LQ G+PCP+CGS HP + V + L A E+++++ G R + Sbjct: 529 ADLQEGEPCPVCGSRQHP--QPAPVAADAVADAALAAAEHQLEETGRALVAARATQAGLQ 586 Query: 558 KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ 617 QL+ ++ P + AQ E R + L Sbjct: 587 AQLEALADQL--------------------------PEGPLPSLQAAQAEAARAVAELEG 620 Query: 618 RHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW 677 L G + + Q + +++Q QQ L E++ LA Q + Sbjct: 621 ARRLAGALDGLEAERQQAEHRVQQFQQRLRQREEETIGCRQVLAEKQKGLADLNQRITAG 680 Query: 678 QQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQ 737 ++ L +IQ L LETL ++ + ++ E R++ Sbjct: 681 LGGDHDPATLLLQIQGLMQALETLIEAAQQRALALSLETEAQRRLAGD------------ 728 Query: 738 QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 L + F+D QA + AL E + Q R AQ Sbjct: 729 --------------------LARAGFNDPQALVQALAPEAERLAWSRTLQQHAADRALAQ 768 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 ++ + A + L ++ + LA R+ + Sbjct: 769 GVLAELAGQ----------ELPELRPDLQAAETGLASADAARRDALARFTRAETAVTAIT 818 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG--DKFRKFAQGLTLDNLVHLANQQL 915 Q+ T ++A+ +Q + + + + +++ L+ + AN +L Sbjct: 819 GLIQRHGTGAAELAEQQRQADLVQGVAARCLGQSDPHISLQRWVLSAYLEEICGYANHRL 878 Query: 916 TRLH-GRYLL--------QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 +++ GRY L +R + L + V+D + R+ +LSGGE+F SLALAL Sbjct: 879 SQMTAGRYELRLSDASGQRRGSKAGLGLRVLDAYTG-EEREVSSLSGGETFQASLALALG 937 Query: 967 LSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKER 1023 ++D V S +++LF+DEGFG+LD ++L A+D LD L G+ IG+ISHV A++ER Sbjct: 938 VADTVQAHSGGVVLEALFIDEGFGSLDPDSLHLAMDELDRLREGGRMIGLISHVAALRER 997 Query: 1024 IPVQIKVKKINGLGYSKL 1041 I ++V + Sbjct: 998 IRTGLEVVASERGSRVVV 1015 >UniRef50_B6G1C0 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1C0_9CLOT Length = 1172 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 189/1184 (15%), Positives = 418/1184 (35%), Gaps = 150/1184 (12%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L +K LNS + IDF + GLF I G TG+GK+T+LDAI L+LY R Sbjct: 1 MRPIKLEIKGLNSYVNKQTIDFEK--LTERGLFGIFGKTGSGKSTILDAITLSLYGSIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + + + EFE+ Y R++ +E Sbjct: 59 ------NTKEYINSLSEKAEISYEFEIGSRRYVVDRHIIRSKAGGIKTSYARVIEKLGDG 112 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +LADKV + E + GL FT+S++L Q +F FL +R +LE + E Sbjct: 113 SENVLADKVNEVNETIIKIIGLTANDFTKSVVLPQDKFNDFLKLGGIDRRNMLERIFNLE 172 Query: 181 IY-GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 Y ++ V + +T ++ LQ S +T E+ + L++ ++ + Sbjct: 173 KYGKKLIENVRHRKNKTKTHVDMLQVSLSHYEEVTDEKYDEMIKKLEIDKEDCRVKNRLY 232 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 +++ + + E Q+ + ++ L+ ++E+ + + +S A+ A + P+ + + Sbjct: 233 KEKVEKYDIDKIIYENQKRYNEAKELLKVYEDKKEEIEEKRKKMSRAENANMIDPYIDNV 292 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + + Q++ + ++ R A+ + L+ + +R Sbjct: 293 EKLRKQFEDSKNQLKIIEEEIRLIKKDLEISRGKFAEIERKKDDTIPRLSEDKVKFERAI 352 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH- 418 E + ++ + E L +++L + + A + D + Sbjct: 353 HLLEETNKLSERLTRLKVEGEKLESKKKELLKNIEDIKAQQNLYAGKIKDSENRLYEINV 412 Query: 419 -AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 A R + + ++ +K L + ++ +Q E ++ N AL + + +++ Sbjct: 413 PAAFRQNIEKGYSHIKELNEVKKELEKSEIDLQKCEAEYSENNIALKLVGRDRASVKERI 472 Query: 478 ADVKTICE-------------------------QEARIKTLEAQRAQLQAGQPCPLCGST 512 +V+ + +K LE +R LQ L Sbjct: 473 EEVENRINIMIKNSPLTAEEITKKTEYVTEMKSELKTLKQLEEERDNLQHELNDCLEKRH 532 Query: 513 SHPAVEAYQALEPGVNQSRLLALENEVKKLG--EEGATLRGQLDA--------------- 555 + + + + +++ + +R +L Sbjct: 533 RVSREISTSEDRLSKVRKDMETAKKNIEEFRYLNRVSDIRKELQDGKPCPVCGSLDHMRT 592 Query: 556 ----ITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD---DIQPWLDAQDEH 608 +++ E + +E+ ++ ++ + + + A+ Sbjct: 593 DSTNYDDRIEYYEGILNKEKANEREEIERLDSLKIKRSGYISEEKIKTEAINKKKAEIGE 652 Query: 609 ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEES--- 665 + L + + A + + + + ++ ++ L Y+ + + Sbjct: 653 RNSIELSKKYDSETRNLEAEKRAVSDWNIEKDRLEEDLKRYKDDYSRNDKEFTRIDELLK 712 Query: 666 -----------------------------------------WLATRQQEAQSWQQRQNEL 684 L + + + EL Sbjct: 713 GIMRRRLSLSENVSELKSKKDNLELEIVSIKRITKVDDIFSKLEEIKANEIESENVEKEL 772 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + +N ++ + S E + + +++ +Q + + Q + + Sbjct: 773 SEFRNIKFEIDKEFDDCKTSIHSIEVEISSIEKDFEGNKKQYIEKTDEAQRITR--GKNP 830 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQ----NLENQRRQAQTLV 800 L + Q + +S D ++ F + L Q E Q + ++ Sbjct: 831 NELLEKTEQEINKINSSYADLKKEFDDKSKAREDKDSLRSKVQGECNTTEEQLDYYKKVL 890 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 + + TV +E +++E++ + + ++ ++L Sbjct: 891 KDMLAKYRFDSAYTVKKFVMPTVDIEIMRKEISDYDEGRKNLDFKIDDLEKKLDGRKVKE 950 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG--------------------------DK 894 ++ L ++I + ++ + N+++ + D+ Sbjct: 951 EEFDRLNEEIVLLKDEIGELEKNNAVLFDRITAMKKDLEKKKKIKSEYDEVSNDYRLLDE 1010 Query: 895 FRKFAQGLTLDNLVHLANQQLTRL----HGRYLLQRKASEALEVE------VVDTWQADA 944 + QG + ++A L + R ALE+ + D + Sbjct: 1011 IDRIIQGNKF--VEYVATNHLKYIALEASKRLSTITNGRYALEINDALEFVMRDNFNGGE 1068 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R TLSGGE+FL SL+LALALS + ++ FLDEGFG+LD E LDT +++L+ Sbjct: 1069 RRGVDTLSGGETFLTSLSLALALSSQIQMKGNAPLEFFFLDEGFGSLDVELLDTVMESLE 1128 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 L++S +IG+ISHVE +K R+PV++ V SK++ ++ Sbjct: 1129 KLHSSNLSIGIISHVEELKNRVPVKLVVTAGEIGEGSKVKIEYS 1172 >UniRef50_Q3ICS6 Exonuclease sbcCD subunit C n=2 Tax=Alteromonadales RepID=Q3ICS6_PSEHT Length = 1217 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 286/1215 (23%), Positives = 473/1215 (38%), Gaps = 178/1215 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI ++R+ NL S+ +IDF P GLFAITG TGAGK+T+LDAICLALY +T R Sbjct: 1 MKITAVRIHNLASIVDA-EIDFLAAPLKDAGLFAITGDTGAGKSTILDAICLALYAKTAR 59 Query: 61 LSNVSQSQ-------------NDLMTRDTAECLAEVEFEVKGEA-YRAFWSQNRARNQPD 106 L ++ +L+ R T+ AEV+F + + YRA WS NR+R + D Sbjct: 60 LGGDRGNKVEFQGDSIRLNDARNLLRRGTSNGYAEVDFVGQDKESYRACWSVNRSRGKSD 119 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 GNLQ + L D +++ ++ GL + +F+R++LL+Q +FAAFL A Sbjct: 120 GNLQAAQHTLHLLPDDTLISSDKSKTVKQIEAKIGLTFDQFSRAVLLAQHEFAAFLKATG 179 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ERA+LLE LTGT+ + +I +FE++K + + E LQA + TLL+ +++ + SL Sbjct: 180 DERAQLLECLTGTDKFSRIGVRIFERNKELKEKFELLQASLASYTLLSEDELAAKQTSLN 239 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA 286 L + + +Q+LNW + + L+Q + QQ QQA E Q A Sbjct: 240 ELKLQIEHTKKTLTTTEQNLNWYKQANTLEQALKQAQQNQQQAQNELNAIAQQSEQAKQA 299 Query: 287 QPARNLRPHWERIAEHSAA--------------------------LAHIRQQIEEVNTRL 320 Q A ++ + R +A L+ ++ ++ + Sbjct: 300 QSALEIKDNRSRFKSLTAQNIELNTKVSDLKSIDHTAIITAHANTLSKHQEILQTAKEQK 359 Query: 321 QSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDRE 380 Q+ + A R ++ + + Q +E + + ++ + T Sbjct: 360 QTAEPIIAKARELDSQLAIQAQTIANLTQQSEKEQLQLNDLQQQFKQSQSVLDEATKLSA 419 Query: 381 HLRQWQQQLTHAE------------------------------QKLNALAAITLTLTADE 410 +QW T + QKL A A TL + Sbjct: 420 QHQQWLTTHTQLKPLANDWNYYQHSFNQFLNATEQLKTTAHQNQKLVAEQAKQATLLTAQ 479 Query: 411 VATALAQHAEQRPLRQHLVALHGQ------------------IVPQQKRLAQLQVAIQNV 452 A +Q +++L L+ Q + Q++R Q ++ Sbjct: 480 NAKVESQEQLLASEQKNLNQLNEQQRQFNIEQCDAKLKNIDYLKDQRERYKQFNHELKYS 539 Query: 453 TQEQTQRNAALNEMRQRYKEKTQQLADVKTICE---------QEARIKTLEAQRAQLQAG 503 TQ+QT+ L + Q Q LA + + + + +E R QL Sbjct: 540 TQQQTRVAEKLIQSEQAQNALLQNLASCEQTLKHNEYTLSQARLRASENVEHLRTQLAPN 599 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLG----------EEGATLRGQL 553 +PC +CG+T HP + A N ++ + A L + Sbjct: 600 EPCLVCGATEHPYASTQNQQLNNLIADFETAYNNAKQQRDSAQTQLHQHQTQHAVLVAEQ 659 Query: 554 DAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL--NITLQPLDDIQPWLDAQDEHERQ 611 ++ +Q + + ++ Q + +T Q + + Q + Sbjct: 660 TQHSQAIQIAQAKQLEIKTTMQDARTELNDLTTEKLDETYKQLSEQKTQYFAVQTQLRTL 719 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ 671 ++Q+ QQ+ ++ + L + ++ + + + Sbjct: 720 QEKVNQQLNALKTEQHAQQQLQNQHVELTNQLNQLSSKHNELSVQINELSAALNAQFEHS 779 Query: 672 QEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE-------------- 717 Q Q L+ L +++Q L L QS + + + Sbjct: 780 DFWQQLQSESLTLSDLNKQVEQYQQTLTQLEQSQKQLDSANQQLQQLTPLITKSDHALKA 839 Query: 718 ---------------------------------------NWRQVHEQCLALHSQQQTLQQ 738 Q Q A + Sbjct: 840 LNDDLAKAQQQQNITQSQRLALFNNEQISASDYQTKLAMQLEQCQTQLNASQQAHDNAIK 899 Query: 739 QDVLAAQSLQKAQAQFDTALQASV---------FDDQQAFLAALMDEQTLTQLEQLKQNL 789 Q A +L+ + + Q F D +A + EQ L + + Sbjct: 900 QRDEHAITLKNVEQRLQEHAQELTSLEARYLEWFTDFKAQHSDASHEQVTILLTLSSEQI 959 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV-----EQIQQELAQTHQKLRENTT 844 + +Q + + +T A +Q + +++ ++L + + E Sbjct: 960 KAHLKQFEQVSQTLTDTNAALKQQQKSYTEHQNTDKPSKNHDELTEQLNVLNTQQTELQN 1019 Query: 845 SQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTL 904 S ++Q N + + ++ + QV+ W LN ++G G R AQ TL Sbjct: 1020 SLLATNTAIEQHNQNAKTLKGKQAELTTLKTQVDQWHLLNKVLGDATGKTMRNLAQTQTL 1079 Query: 905 DNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALA 964 L+H AN L L+ RY L L++ ++D AD R TLSGGESFLVSLALA Sbjct: 1080 KILLHYANSHLKTLNKRYELTAIEHS-LDIAIIDRDMADEQRSVNTLSGGESFLVSLALA 1138 Query: 965 LALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERI 1024 L L+ L S+K +I+SLF+DEGFGTLDSETL A+DALD+L A G+ +GVISHV M ER+ Sbjct: 1139 LGLASLSSNKVQINSLFIDEGFGTLDSETLSVAMDALDSLQAQGRKVGVISHVSEMSERV 1198 Query: 1025 PVQIKVKKINGLGYS 1039 Q+ V K G S Sbjct: 1199 ATQVHVAKKPGGYSS 1213 >UniRef50_C5D6P9 SMC domain protein n=3 Tax=Geobacillus RepID=C5D6P9_GEOSW Length = 1116 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 223/1126 (19%), Positives = 440/1126 (39%), Gaps = 103/1126 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL + L+S + + IDF G+F I GPTG+GK+T+LDAI LAL+ R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFQS--LCEGGVFGIFGPTGSGKSTILDAITLALFGSVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR--VELAR 118 N +Q +M E FE++ ++ R+ + D + Sbjct: 59 APNHTQG---IMNHAENELFVSFTFELENATCTKRYTVERSFKRGDEWRLKSGICRLIEV 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 A+ +LADK+ + + L GL FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 GAETVVLADKLTEVNKAIEQLLGLTMKDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFH 175 Query: 179 TEIYGQISAMVFEQHKSA-RTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG ++ +A EL ++ A+ +G+ + E ++ L+ L D ++ Sbjct: 176 LEPYGDKLNKKLKEKLAAISNELNEVIAEKTGLGDASEEALERAKQELETLWDLLQKRKA 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + ++ + Q+E + L + +EE + A+ A + P+ E Sbjct: 236 ELHDMEVTMERTKQLWAWQREKEELEAELARLASEESHIRLLENRKERAEQAERMWPYLE 295 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + E + + ++ +E+ +L L H + E + L ++ + Sbjct: 296 QYEEARRFVINAEEKQKELQKKLVQAKELYEKATHRYERIRQEKAASEPHLLAKKEQLTQ 355 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQ------------------------------ 387 +Q + + ++ L + ++ Sbjct: 356 AKQLAAQIHALETELNEMRKQIHLLEEEERKKLVEWQEAAKLYERGLEKQQMLKAELQKY 415 Query: 388 ----QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLA 443 + ++ +T +Q+ +Q + + Sbjct: 416 AASIEQKEVVERAYDEKQQIERITDALQDIQQRLAQKQKAQQQANKEREKRKQRAETAKE 475 Query: 444 QLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 +L V Q + + ++ +R QQL + EQ + QL+ G Sbjct: 476 KLHVLFQKIEKVYHSVCERQWQLEKRLYRYEQQLEQEREKAEQAKTAEMAAILARQLRQG 535 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE-NEVKKLGEEGATLRGQLDAITK---- 558 +PCP+CGS HP Y+ + +L + + + + TL+ QL+ + + Sbjct: 536 EPCPVCGSCEHPNPYVYEHNNVSSGKIAILEQQVKQGQTYMQVLHTLKAQLEQLAQFIGN 595 Query: 559 ----------------------QLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 +++ + + L++ Q Q+W+ +S Q L Sbjct: 596 EWTFQRFDVSKLKVEEDIDIAVEVKALQQDCLQLKEALQQALQKWRDAESSQQAIEQELR 655 Query: 597 DIQPWLDAQDEHERQLRLL-----------------SQRHELQGQIAAHNQQIIQYQQQI 639 ++ + L+ Q+ H + + + Q++I Sbjct: 656 LLEKDVQELQTEREYRFNEYNQLEASWREKYTDFSFDTIEALRNQMRKHEEIVRKLQKRI 715 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL---QNRIQQLTP 696 + L T L Q+ E E+ ++ QQ ++ + +Q+ Sbjct: 716 DDSIPFLETKLNEKERLAQQQRELETEKVRLVSLWKAKQQLADDYKQQLMEKAGGKQVEE 775 Query: 697 ILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDT 756 L + + EE + W Q +Q AL ++ + +QQ + ++A+ ++ Sbjct: 776 QLLQVEKQLLYLKKEEEEAYQRWLQTQKQYQALETEAKAIQQSLEEGKERYEEAKLRWLN 835 Query: 757 ALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPD 816 L+ + F D+ A E+ + EQ ++ + + AQ + Q E + Sbjct: 836 ELKKTTFADENEVKEAKAAEELRLEWEQQIKHYWQKVQHAQHRLQQLTEAIGGE------ 889 Query: 817 DGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQ 876 + EQ+Q Q Q++ E G + ++++ + ++ L ++ ++ Sbjct: 890 --MIDQQQWEQLQTVYEQIKQQVDEAMQQVGAAQNKVEELTEKHKRFTELEKKQQELAAL 947 Query: 877 VEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEV 936 ++ + +L S++ +G+ F +F L + +A+++L+ L R + + Sbjct: 948 MDRYKHLQSIL---KGNSFVEFMAEEQLIQVTRMASERLSSLT-RQRYSLEVDSQGGFLI 1003 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETL 994 D R TLSGGE+FL SL+LALALS + + + FLDEGFGTLD+E L Sbjct: 1004 RDDANGGVKRPVTTLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDAELL 1063 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 DT + AL+ L++ ++GVISHV+ ++ R+P ++ V+ G Sbjct: 1064 DTVISALEKLHSQRLSVGVISHVQEIRSRLPKRLIVEPAEPSGRGT 1109 >UniRef50_Q03P50 DNA repair ATPase n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03P50_LACBA Length = 1049 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 224/1079 (20%), Positives = 402/1079 (37%), Gaps = 72/1079 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M ++L L+ + IDFTR F + LF I+G TG+GKTT+ D +C AL+ +T Sbjct: 1 MTPVTLHLEYFGPYRDAT-IDFTR--FMTTPLFLISGKTGSGKTTIFDGMCYALFDQTSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV-----PRVE 115 + + F + Y + N+ G + Sbjct: 58 TDRKAPAMRSDFATAADRTRVTFTFTHRDRRYEIIREPAQTLNKKRGQGLTDVAAAVTLT 117 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + K + L +D +F++ +LL QGQF FL A +E+A +LE+ Sbjct: 118 VYADDREVTQLTKTNQVRDYLQELLQMDGKQFSQIVLLPQGQFRQFLIAPSEEKAAVLEQ 177 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L TEI+ + + + +Q K + + A+ + + ++ A+ ++ + + Sbjct: 178 LFNTEIFARWTEQLKQQLKKDQATSQTTAAEVTRLLASLQWTSENEEAAQTLIAAQRPEP 237 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 + QQ+ +Q +L++ + Q + + + ++E+ Q L R Sbjct: 238 VVTLMAAQQA-TTREQQAQLERRLATAQATVDRLVRQDEQEQSLLKDRQQLTQYRQQATE 296 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQS-------------TMALRASIRHHAAKQSAELQ 342 + A L +E V TR + A + + L+ Sbjct: 297 LAQQAPAMDDLQTTVTALEWVQTRQPAWQEREQAQQAQQQRQADQQQAQQDLMAAQTALK 356 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 Q Q ++ + A WRA + QQ AE++ A Sbjct: 357 QAQAAVEQHQTLSAKITATTETLAQWRALEPIYQRVATLEQDLQQAQQDAEKRQIAYQQA 416 Query: 403 TLTLTADEV-----ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQT 457 T ++ L Q AE + L+ + Q + A LQ + + T Sbjct: 417 QTAWTTNQQAQTQQRAILDQQAEIYARQTKLLQQANDLADAQSQAATLQQQVAQ-QADLT 475 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 Q+ + + Q + Q D+ Q + + AQL G PCP+CGST+HP Sbjct: 476 QQISQITGRLQTAQSAAQTAHDLAAARYQVFLRQQIVTLSAQLTPGTPCPVCGSTTHPQP 535 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E A E++VK+ ++ Q D + QL + + + +Q+ Q Sbjct: 536 AQATVTE--------TATEDDVKRAQDQATHATQQADQLAAQLTTLQQQLNANQQEHQTA 587 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 Q +A + L + L + + +++ ++Q E Q + QI Q + Sbjct: 588 LQALRAQLSV--ADTMDLTAMGAILTQRCQEQQRAEQVNQ--EQQAALKQAQTQITQLTE 643 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 + Q + T D+ + L T E Q + R+Q+L Sbjct: 644 AAVELQAKVTQTQQAVQQQNTTVDKLATTLTT---EQQRLPADASTRAEYLTRVQKLQDQ 700 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 L Q + + ++ + Q+ A L A Sbjct: 701 LAADQQMWTAIEQQYQTAQQTVLVAQDRLATATKEVTQSDQRVARAQADLAAQLAHPVAP 760 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L D + L TL + Q + Q+ + TL+ ++ L Sbjct: 761 LA---TDTEAQVARWLPQVATLPVKREQLQTFQAQQARLATLIETLSKRLQG-------- 809 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 E Q L + Q + + +++ L+Q+ Q+ + ++ Q A QQ Sbjct: 810 --QAKPDREATQSALIEASQAVTTLREQERQLKNLLEQNEQATQRLRAVLDQQATALQQT 867 Query: 878 EDWGYLNSLIGS---KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKA----- 928 ++ L ++ ++ L ++ + NQ+ +L GRY Sbjct: 868 QELTELAGVVNGDGPNSKLGLERYVLQTYLRQILTVGNQRFQQLTNGRYQFVIDETPAAS 927 Query: 929 --SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLD 983 LE+ V D R TLSGGESF+ SLALALAL +++ +D+LF+D Sbjct: 928 KKRSGLEINVYDDHVG-EQRSVHTLSGGESFIASLALALALGEVIQQTTGSVDVDALFID 986 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 EGFG+LD + L TAL++L+ + + IG+ISHV +++++ Q++V NG G S + Sbjct: 987 EGFGSLDEDALMTALESLETIEGRHRMIGIISHVSELRDQVANQLQVV-ANGNGESTIR 1044 >UniRef50_C8XKJ6 Exonuclease SbcC n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKJ6_NAKMY Length = 1099 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 218/1117 (19%), Positives = 364/1117 (32%), Gaps = 91/1117 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++ + + E +DF F F + G TG+GK+T++DA+ ALY PR Sbjct: 1 MRPVRLQMNGFAAFRDEAVVDFADADF-----FVLVGATGSGKSTVIDALTFALYGTVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR-----NQPDGNLQVPRVE 115 ++ S L + + F+V Y R R + Sbjct: 56 WNHRSMVMYGL-APTANQGKVALLFDVGDTRYLIARELRRTRTGVHVRNARLERLLDPTA 114 Query: 116 LARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 D L GL Y F + ++L QG+FA FL AKP ER +L + Sbjct: 115 TGTIDDATESIATDSGVTAAVEKLLGLPYEHFCQCVVLPQGEFADFLRAKPAERRTILLK 174 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 L G +Y I + A E L Q +G+ T + Sbjct: 175 LLGAGLYTDIGQRANGRASLAGQRAELLTEQLAGLADATDAAETQAAQRESDFQSLVAAV 234 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQAL---------QQALAEEEKAQPQLAALSLA 286 + + + L + + L A E +Q L A Sbjct: 235 EQQVPRLRTAATALDAARSERDRLIAERDLLAGLVVPHGIADLDAAHEASQATLTRAGEA 294 Query: 287 QPARNL--RPHWERIAEH--SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 + A L R ER+A A L ++ E+ T + +A R A + +A + Sbjct: 295 EAAARLVDRQARERLAGAPDRAPLERALREHAELATVEAARPPAQAQARAAADRLTAAIT 354 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQW---QQQLTHAEQKLNAL 399 + + + A Q + T++ + L + A + A Sbjct: 355 DAGAATTALERARSARDVARSTVADLSDQVDRLTAEVDQLTAVVVPDGLVELAGRTAAAA 414 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 AA+T A A A+ + + V LA Q A+ +T E T+ Sbjct: 415 AAVTAAAEALAAAQDREVRAQDLLAQAPARGPIEESVRLVTDLATAQAALAPLTAEHTRS 474 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 +AA + + + E A R++L AGQ CP+C A Sbjct: 475 SAARQAADNALAQAERAAEQARATREHARITHRAAALRSELVAGQACPVCDQPVATVPAA 534 Query: 520 YQALEPGVNQSRL---------------------LALENEVKKLGEEGATLRGQLDAITK 558 A E + AL + E+ A + +L Sbjct: 535 AHAPELADADEAVLARERAVARARAAQSAAATAETALATRLAAAQEQLAAVTARLAGRPT 594 Query: 559 QLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS-- 616 L + + E + + S + + R LR Sbjct: 595 DLAELRAGLAQIDRLEADAREAATHLRRSRGAHDGAVAAARSLDADTAAARRALRAARDP 654 Query: 617 ---------QRHELQGQIAAHNQ----QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE 663 +L G A Q + Q+ +Q L T T A + + Sbjct: 655 LVAFGAPGVDEADLLGAWTALADWAGAQAGARRTQLRAQQAALATAHTAQARARDEFNAA 714 Query: 664 ESWLATRQQEAQSWQQRQNELTALQNRIQQ---LTPILETLPQSDELPHCEETVVLENWR 720 + Q+ + A Q E + + E Sbjct: 715 DDAAGAAQRAVNAATAAAERAAATAQHWQDRHAELAAAVAGAPGVEAATADLRRIDELTA 774 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 V AL S A + + + L+A+ L +E L Sbjct: 775 AVRTSDAALQSAAADRAAAAAAVASLTDQVRQAWRG-LRAARDTVIGLGAPDLPEESVLA 833 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQ--IQQELAQTHQK 838 L R + L +HR LT + ++ + + Sbjct: 834 GWSALSAWATAAARAGSAAAPDVEDALLAATRHRDAAADQLTGELAARGLEVDGDLADRA 893 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 + + R + + A+ R Q + ++ + Q + L +L+ S F ++ Sbjct: 894 PAAAAAALAQARAERARIAERRAQAAAVQGELDRARQDHQVASTLGTLLRSNN---FPEW 950 Query: 899 AQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + LD LV A+++L L G++ L + E VVD AD++R RTLSGGE+F Sbjct: 951 LESAALDTLVIDASRRLGELSGGQFELTHRDG---EFMVVDHADADSIRSVRTLSGGETF 1007 Query: 958 L----------VSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNAS 1007 L+ S R+DS+FLDEGFGTLD TL+ L+ L Sbjct: 1008 QASLALALALSTQLS-----SMAAEGAARLDSIFLDEGFGTLDDATLEVVAGTLENLAQG 1062 Query: 1008 GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 + +GV++HV A+ +RIPV+ V++ + + E++ Sbjct: 1063 DRMVGVVTHVGALADRIPVRFVVRRDSRTSSIEREAS 1099 >UniRef50_C0EV37 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV37_9FIRM Length = 1149 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 225/1159 (19%), Positives = 448/1159 (38%), Gaps = 129/1159 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L+LK +NS + E IDF E S GLF I GPTG+GK+T+LDA+ LALY + PR Sbjct: 1 MRPLQLKLKGINSYREEQVIDF--ETLTSQGLFGIFGPTGSGKSTILDAMTLALYAKLPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV---KGEAYRAFWSQNRARNQPDGNLQVPRVELA 117 + + + F + + Y A S N ++ L Sbjct: 59 D------TKNFINTNETTASVSFLFSITTDRTRKYLAERSFRYHNNTYTSTVRNTTGRLI 112 Query: 118 --RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 + +LADK + L GL F R+++L QGQF+ FL+ K KER +L+ Sbjct: 113 VCDGENETVLADKPTEVTAECIRLLGLTSEDFMRTVVLPQGQFSEFLHLKNKERRIMLQR 172 Query: 176 LTGTEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 + E YG ++++ + + L KL + ++ Q+ L + T + + Sbjct: 173 IFHLEKYGIELTSKIGRAKQKQELLLSKLDGEKKNFEEISSVQLSKLQKQEKSDTKQHSR 232 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 L + ++S QQE ++A ++ + + L++ + A LRP Sbjct: 233 LSKKLAKLEKSFQKTEELYNTQQELLPLKKAQKEKELLLPSIKEKENNLNITKKANQLRP 292 Query: 295 HWERIAEHSAALAHIRQQIEEVNTR-------LQSTMALRASIRHHAAKQSAELQQQQQS 347 +++ +A +++E V + T + ++ LQ ++Q Sbjct: 293 FSIQVSNAQSAYDQACEKLETVQKETACLQSHFEKTEKEYHAAASAQKEELPLLQAREQV 352 Query: 348 LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKL-NALAAITLTL 406 L+T D W + + + + L++ Q+Q E+++ + + ++ Sbjct: 353 LHTAQSAADTIHTWEQTKGNAQKELQEILASLAPLKETQEQHFKKERQIHSEIVESEKSI 412 Query: 407 TADEVATALAQHAEQRPLRQH---------------LVALHGQIVPQQKRLAQLQVAIQN 451 AD ++ Q E+ + + L L+ +I + + Q +++N Sbjct: 413 EADRISPERKQLLEKGNVMEETYREKRENYNTNANALSTLNTEIKEEHDAFSIQQKSLKN 472 Query: 452 VTQEQTQRNAALNEMRQRYKEK----TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 + + R +ALNE K++ + K + + + R +L+ G CP Sbjct: 473 IYTQLCHRRSALNEQHSAAKKELGIIKGKEEQAKQKQKSWQQNHMAQLLREELEEGALCP 532 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR----- 562 +CG+ V E S ++ + ++ +L Sbjct: 533 VCGTPYKEHVSQSHIAENVKTSSETISDVTTKRDTEAFSKNDSETIEKKEAELSEISFKN 592 Query: 563 DENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ 622 E + L + +Q Q + L + +++ L+ DE + + + Sbjct: 593 LEKGLKKLEKQQQTQQNLIQQLEQELFSLDTHISNLKDALEITDEDTIEDNETDRHFTIN 652 Query: 623 GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN 682 I+ + I++ + + T L Q+++ E AT +++ + Q Sbjct: 653 ENISQASPVIVEKPIDYFSISKQISTYLQAKGDLRRQKEQCERQAATLKEQHSALQNYAE 712 Query: 683 ELTAL-------------------QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVH 723 E+ L + QQ ++ Q E + V+ + Sbjct: 713 EILTLRKDNNIENFSNTLETLRQKEQERQQKEITIKEQRQHLEKLRSDIKVLSAQIAGLE 772 Query: 724 EQCLALHSQQQTLQQQDVLAAQSL-----------------QKAQAQFDTALQASVFDDQ 766 + +L + + ++ + Q+ Q + +TAL+ + D Q Sbjct: 773 NKSSSLTANIENCEKVIAEQTEKFPKTLSINMDFVSEITKNQQRQQEINTALKHTEKDYQ 832 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 Q+ + LT + ++ E +Q Q L + L + +P+ + Sbjct: 833 QSLKELQKKNKELTSCQSTSRSSETHLKQVQELYLTQKKELGFSKTDQPELYYMEEKELT 892 Query: 827 QIQ--------------------------------------QELAQTHQKLRENTTSQGE 848 +++ +ELA Q+++E +S Sbjct: 893 KLEKDITSYYDDVRQNEERIRYLQEKLGKKEIEESEWIRQKEELADIKQQIKELDSSILL 952 Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 + Q++ + +++ L Q+ + + + L L +G+ F ++ L + Sbjct: 953 LTHQIETMTKDLAKKEELEQKWETESHKKDMIKELEQLF---KGNAFIEYVAQSKLSYIA 1009 Query: 909 HLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 A+ L+++ G + +++ E + D A+R + TLSGGE F+ SL+LALALS Sbjct: 1010 REASVILSKISGGNY-ALEINDSAEFIIRDNKNGGAIRPSDTLSGGELFITSLSLALALS 1068 Query: 969 DLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 + ++ FLDEGFG+LD + LDT +++L+ L + ++IG+ISHVE ++ R+P+ Sbjct: 1069 SSIQLNGAAPLEFFFLDEGFGSLDDDLLDTVMNSLERLQSKKRSIGIISHVETIQARVPL 1128 Query: 1027 QIKVKK---INGLGYSKLE 1042 ++ V +LE Sbjct: 1129 KLLVTPSDLSQKGSQIRLE 1147 >UniRef50_A8MJ39 SMC domain protein n=2 Tax=Alkaliphilus RepID=A8MJ39_ALKOO Length = 1174 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 212/1187 (17%), Positives = 411/1187 (34%), Gaps = 171/1187 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L++K +NS E I+F R GLF I GPTG+GK+++LDAI LALY R Sbjct: 1 MRPSLLKIKGINSFHNEQIINFNR--LVEKGLFGIFGPTGSGKSSILDAITLALYGNIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 S + + + EFE+ + R + R + V R+ Sbjct: 59 DS------KEFINTEADRGEVSFEFEILDGSLRKTYRLERGIKRKKNGGIETTVARIIEI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 + +LAD V + GL+ FTRS++L QG+F+ FL +ER +LE + Sbjct: 113 NGEEVTVLADSVTSVNNEVIRVIGLNAEDFTRSVVLPQGKFSEFLKLTGRERRNMLERIF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G E YG+ I + + K + L+ Q + + ++ L +L EEK L Sbjct: 173 GLEQYGKNIVEKINAERKKYDAKRMDLEGQLKSYEGVNESYYKEVSEKLHLLLVEEKALK 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP-- 294 + + + ELQ E + + + + + + L + A L+ Sbjct: 233 KEIEDLDKEYQQSKKIWELQGEMASYKGMEVLLREKRTEIEEKRKTFILGEKANQLKAYV 292 Query: 295 -----HWERIAEHSAALAHIRQQIEEVNTRLQSTM------------------------A 325 ERI ++ AL + +++ +++ L+ Sbjct: 293 QNLKSLEERINQNQLALDALEKELPKISKLLKELEDRYQNALICKEEKFPKFIAKIENCK 352 Query: 326 LRASIRHHAAKQSAELQQQQ-----------QSLNTWLQEHDRFRQWNNEPAGWRAQFSQ 374 I + E++ + + + ++ Q E + Sbjct: 353 QAEKIEQQNLILAKEIEGLEKIYHYHCNLSKEKSQELEKSKNKVAQLQREVVVIEKTLEE 412 Query: 375 ----------------QTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 DR L+ + + + L+ + DE+ Sbjct: 413 IYLEPSHREALEEGYTLNKDRNRLKVEKNEAEKILRDLDKVIEENKVQLKDELEARQQLE 472 Query: 419 AEQRPLRQHLVALHG------------------------QIVPQQKRLAQLQVAIQNVTQ 454 + + + +L + + L AIQ + + Sbjct: 473 SVLKSFFEEKTSLENSPLKEEGTIFAKKTELDQKKNQWKALEQNLSQKIDLNKAIQQLVK 532 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 + + ++ QL +K L G+ CP+CGS H Sbjct: 533 TRESLQEQQEKYIVDIQQAESQLEGLKEESRNIEIEYLALKLSEHLHHGEACPVCGSKDH 592 Query: 515 PAVE------------------------------------------------AYQALEPG 526 P LE Sbjct: 593 PNPAVGGEVASTADYHHRIQEMTTVTSTLKEKKVDLDIRIAEILKEEELKRSDLAILENL 652 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 + L L E++KL E L + +A + + E + ++ + ++ Sbjct: 653 MKDVNLEVLLEEIRKLEVEIPALMKEREAYLQGKNKLEEGIERYKEKISLANTRITELST 712 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + + D I+ LD + + + L + ++ +I + + ++ ++R + Sbjct: 713 KIEKDGENQDTIRLKLDERSQRIKYLSAIIEKINKDLKIEDIAVEYERIKEMDKERSKKE 772 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE------- 699 + ++E+ + Q +L + ++ ++ Sbjct: 773 KELKDLRKAVEMENRQKETLQNEVNALNLEKVKNQQQLDGNKEKLSLAREEIKMLTDGNN 832 Query: 700 ------TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 L + EE + + + ++ + V Q + Sbjct: 833 PTAYKTALQNEMQKVEAEEKELKGRVEKGRGIQQSKLEEKAIAENNKVNLVQEYALKVQE 892 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 + + F + L ++Q L LE +++ ++ + + + L Sbjct: 893 LEKLSKEKGFSSIEEIQGYLFEDQKLDILEDEITAYDDEVKKVNQNLERIQKAL------ 946 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 D E +++ L E GE++Q LK + + L ++ ++ Sbjct: 947 --DGRAITVDQWETLEKSLTTKKNIQEEKAKEIGEVQQTLKDTNVKLEAMKQLKKEENKI 1004 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASEAL 932 T Q++ L+ ++ EG++F ++ L + A++ L + GRY L+ +S Sbjct: 1005 THQLDLLSELSKML---EGNRFVEYVAINQLKYIAREASKWLKDITRGRYALELDSSGN- 1060 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLD 990 + D + R T TLSGGE+FL SL+LALALS + ++ FLDEGFGTLD Sbjct: 1061 -FIMRDDFNGGIRRATNTLSGGETFLTSLSLALALSSHIQLKGSAPLEFFFLDEGFGTLD 1119 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 S+ L+ + AL+ L++ ++G+ISHVE +K R+P+++ V G Sbjct: 1120 SDLLEIVMTALERLHSEKLSVGIISHVEELKNRVPIKLMVFPPEFGG 1166 >UniRef50_C2C1D7 SbcC family exonuclease n=1 Tax=Listeria grayi DSM 20601 RepID=C2C1D7_LISGR Length = 1014 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 205/1064 (19%), Positives = 406/1064 (38%), Gaps = 86/1064 (8%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 ++ + G+ IDFT +F I+G TGAGK+T+ DAI A++ + S Sbjct: 1 MQAFGAYAGKETIDFTE--LQHEQIFIISGKTGAGKSTIFDAISFAIFGKNNTSDRDGIS 58 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNL-----QVPRVELARCADG 122 + F++ +R + + + G Q + + Sbjct: 59 MRSHYASADELTEVSLLFKLGTRIFRIERTPQQEITKKRGEGTRTVNQKAVLYEIMDGEE 118 Query: 123 KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIY 182 K+LA ++D + L L +F + +++ QG+F L + KE+ +L+ L T IY Sbjct: 119 KLLASAIRDVDSKISELMQLTVDQFRQILMIPQGEFRELLTSDSKEKEAILQRLAHTYIY 178 Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTL------------LTPEQVQSLTASLQVLTD 230 Q+ ++E+ K E+++ + + T E Q + + Sbjct: 179 KQMEDKLWEKEKKLADEIQQKRQAVILLAENGLDEKAMLSGMTTEEISQQFQTEISQKEE 238 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 E+ + ++ ++ + + L + Q L++ AE + + + A+ Sbjct: 239 EQIESELQLKKVRKEADEAAEKWTLAKNIQTDFQYLERYQAELAQFEAKQEAVESQIHTL 298 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 R+ A ++ ++ + L A E + Sbjct: 299 QRAKQALRLQSQDANCIQLKARLTKRERELAEIERELAEATTRLQTIRKESDAIEAKAGW 358 Query: 351 WLQEHDRFRQWNNEPAGWRA-QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 + F N + + ++ E L + L Q++ L Sbjct: 359 IEERRKTFYYLENLEPKIIKWEALKTKAEDEQLAKLAAALEQNAQQIKDLEQQKAGFDRQ 418 Query: 410 EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQR 469 + + + + R + A + + ++ Q + ++Q L Q+ Sbjct: 419 KEQLVDVEINQLK--RANESAQQERELEIWRQKKQQLAELTIYREKQASTLGQLAAYEQQ 476 Query: 470 YKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 +Q+ + E + + + L G+ CP+CGST+HP + + Sbjct: 477 LAPLEEQVEAL----ESQQKNQQAAVLAGHLHEGEACPVCGSTTHPELAVFSNEVDLEL- 531 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN 589 + + E+ L+ + + + + Q+ + L ++E ++ A ASL Sbjct: 532 ---------LAQTQEDLQHLQSKKEQLKAENQQITWQMSQLTREELPNAEEINANIASLT 582 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTT 649 LQ L + R+L + L +I + +Q I ++QQ T Sbjct: 583 EALQKLAS---------QAAEAERMLQTKQTLHLEIEKAIAAQQELEQTITKQQQSYETL 633 Query: 650 LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 + E E+ A +Q+ + L + Sbjct: 634 KQQSEQIAAERTFLE-----------------QEIPAEYQNLQKFQQEKQQLQEQIVSHD 676 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 + + E + E+ + + ++Q Q L + +A F L+ F A+ Sbjct: 677 KQAKQLQEELHSIIEEVSRKDAAKGNVKQDMARTQQELDEERASFKQLLKEQEFASYDAY 736 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 A + ++ + +LE+ Q +N A++ + LA ++ ++ Sbjct: 737 KQASLTDEEMDKLEKQIQAFQNDFEIAKSRYQDLSTKLAN----------TTYPDLDHLE 786 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 + + Q+ ++R +L +N Q+ + M +A+ Q+ + G+L Sbjct: 787 EVWQEKQQQRERLEEQTVKLRDRLTFKRENFQRFEKEMHHVAKQEQKYAELGFLADTARG 846 Query: 890 KEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK-------ASEALEVEVVDT 939 K K F ++ G LD ++ AN +L ++ GR+ L RK A LE+EV D Sbjct: 847 KNERKLTFERYVLGAFLDTIIERANLRLAKMTGGRFQLSRKLDRSKGNAQSGLELEVYDA 906 Query: 940 WQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDT 996 + +R RTLSGGESF SLALAL+L+++V + ++++F+DEGFGTLD E+L+ Sbjct: 907 YTG-YMRHVRTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFIDEGFGTLDPESLEM 965 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 A++ L SG+ +G+ISHV +KERIPV+++V N ++ Sbjct: 966 AVECLLETQESGRLVGIISHVPELKERIPVRLEVTATNHGSTTE 1009 >UniRef50_C0VZX1 Exonuclease n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZX1_9ACTO Length = 983 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 208/1066 (19%), Positives = 385/1066 (36%), Gaps = 117/1066 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETP- 59 M+++ L + E +I F F S GLF + G TG+GK+T++DA+ ALY E Sbjct: 1 MRLIELNFAAIGPFPEEHRIRF--ADFESAGLFLLRGATGSGKSTIIDAVLFALYGEAAI 58 Query: 60 RLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRVELA 117 ++++ S R AE+ FEV YR S A N+ +L Sbjct: 59 KITSSSLRLRSNFARKEMNSYAELIFEVPSGIYRIQRSPAYVKAGNKNATAATAVLEKLV 118 Query: 118 RCADG----KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 D + LA K +D L + G+ +F ++++L QG+FA F+ A P R +LL Sbjct: 119 VVEDEVISREPLAAKPRDVNALIPEIVGIQADQFLQTVVLPQGKFAEFVRATPDARKQLL 178 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS---LQVLTD 230 +++ T+ + + + E+ ++AR + E+ +A +T +L + + Sbjct: 179 QQIFKTQHFNTFTEKLKEKARAARAQYEETSLRAQQLTATILGAENNLQDATVISVEVDS 238 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR 290 K L + L+ + L+ AE + + A+L+ Sbjct: 239 LLKNLKAEVSTQTALLHGTKTLLREAKFTYAEVSELKGLQAEFTLVEAEYASLNQRVAEM 298 Query: 291 NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 +A + + + + E+ T LQS + + +++ + + Sbjct: 299 QELAETIELARQAQPVLSVAEAFEKAQTNLQSLHIRLEAECDYHLEET-----VNTAWES 353 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 Q A Q R+ L ++ + ++ L + A Sbjct: 354 AEALLTEKTQTEATLTQQLAVIKQLNEKRQTLVNKVAEVAQLKATVSE-QEQLLEMAAAP 412 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + L E L + Q+ + RLA ++ ++ + E+ Sbjct: 413 MEQQLKNITELEAEVTQLPLVAEQLTEFKNRLA-----FVDLADQKRKELVECAELIGTR 467 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS 530 + + + + + T A QL+ G+ C +CGS HPA+ E Q Sbjct: 468 VRQLESAKRESQVIWERWKENTAGALATQLKDGEACFVCGSVEHPALAMESNCEAVSTQ- 526 Query: 531 RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI 590 ++ ++ E + L+ + + E L + A+ + A Sbjct: 527 -------QLAEVAEAENEAKLLLEKTQDKHVQLNTEIAELNKQAGAMRLHLEDGIAEREQ 579 Query: 591 TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 L+ L + + L+ S Q+ QQ+ + + E+ Q+ + + Sbjct: 580 LLRDLQAKEAAV---------LQAKSDYDAALAQLTEIRQQVSLAKVRSEEIQKTITSLE 630 Query: 651 TGYALTLPQEDEE-ESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPH 709 A E L + Q + + L L +++Q LT I + Sbjct: 631 AEIATAEATTLGLSEVDLVAKTQSLSAEVTKLRALVNLLSQLQSLTEIASQTEAELQQAL 690 Query: 710 CEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 E SVF Sbjct: 691 TE-------------------------------------------------SVFSSVNEA 701 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQ 829 A+ + L + QL + + Q +T + L ++ D L + +Q Sbjct: 702 KQAVEAVEPLDEKLQLVASFHAKHAQVKTRFLELRSVLETVRE--LPDLEHLKTVISSLQ 759 Query: 830 QELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS 889 ++ + E T +LKQ + Q L+ +++ + + L++ Sbjct: 760 EQQDNFYALQAEAT-------AELKQVQNQAVQLDNLLAELSDLEARNGVVLRLSAFAAG 812 Query: 890 KE-----GDKFRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKASE--------ALEVE 935 + + + ++ AN + G R+ L R + L + Sbjct: 813 AKTVTGVEIPLSTWVLMERFEAVIAAANPFIASFSGSRFKLVRVDDDANSQARHGGLGIA 872 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSE 992 V D+ D R ++TLSGGE+F VSLALAL L+++VS S+ +DEGFGTLD E Sbjct: 873 VYDSET-DQQRPSKTLSGGETFYVSLALALGLAEVVSAEAGGIDFRSMLIDEGFGTLDPE 931 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 TLD L+ + +N SG+T+G++SHVE ++ RI I+V + G Sbjct: 932 TLDKVLEGIKKINQSGRTVGIVSHVEELRRRISDGIEVFPRSEGGS 977 >UniRef50_C2BSE3 ATP-dependent dsDNA exonuclease SbcC n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSE3_9ACTO Length = 1058 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 179/1080 (16%), Positives = 366/1080 (33%), Gaps = 77/1080 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L L+ + S +D A +GLF ITG TG+GK+T+LD I ALY + Sbjct: 1 MKFHRLTLEGVGSFYERTTLDLD--TLAESGLFLITGKTGSGKSTILDGIVYALYGDVAG 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG------NLQVPR 113 + + + F + Y + + L+V Sbjct: 59 ERESTTDRILSYYWDKDYPPEVVLVFSAHDKFYELQRTVTFTKPGRKTPVPSIAQLKVSD 118 Query: 114 VELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELL 173 + I K D ++ + GL+ F ++++L QGQ FL A +R E+L Sbjct: 119 TSVFTKVTEPIATGK--DVTKMVVEILGLEKSHFLQTVILPQGQIQQFLTAGAGQRHEVL 176 Query: 174 EELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEK 233 L G + + E+ + + + + + ++ + + T Sbjct: 177 SNLFGASNFIALEKAAKERASQGKETTAEYTRRLDELLTTAYADLSNIEIAGENETAWHD 236 Query: 234 QLITAQQQEQQSLNWLTRQDELQQEA---------SRRQQALQQALAEEEKAQPQLAALS 284 L + + ++ D Q S Q+ A +E L+ Sbjct: 237 TLEEFAAAKDAAAQSISALDRAGQPLFASATKILCSETAQSKDAAEQAQEHYLAAQTELT 296 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 A+ + + ++A+ + L +IE+++ R Q + A I A Q Q Sbjct: 297 KAETEQRVILEARQMADKLSQLTAKTTEIEQLDQRNQKALHANAVIDADDAAQEP-YQSA 355 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + L + + + A +R + S + L+ W + + + A Sbjct: 356 RHQRANILDTLAQLVDNDTDLARFRDRVSALSD--TDLQNWLE-----DADFSPHLADLR 408 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + EV + + + ++ +L L + + A L+ Sbjct: 409 DEISAEVNASQKKLETIKANLSLQREKTTAAHSKESKLESLHNQMHQLADNAKTTKATLD 468 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 + RQ +E+ + + + A ++ L E Sbjct: 469 QKRQSLREQKSLADGLVSRQTELANVQELHEWAKS------------------AEKLTTE 510 Query: 525 PGVNQSRLLALENEVKKLGE-EGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 Q + +L+ + E + LR +L + +S A Sbjct: 511 LKAAQENVASLQAHYDQAQENAASVLRKWSSTAASRLAARLKDGESCPVCGSRNHPHPAA 570 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR-HELQGQIAAHNQQIIQYQQQIEQR 642 T + ++ AQD ++ +LQ + ++ Sbjct: 571 ETTNQTTFQDYEAAVRDAKKAQDRLTHGNETKTEINTKLQTATDQLQGRDVESLAADLAV 630 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ-NELTALQNRIQQLTPILETL 701 L T + +PQ +E + L ++ Q+ ++ + L I+ L ++ L Sbjct: 631 ATQALAAATAASEQVPQLEETIAALEESRERNQTEREILIQQEAGLSTEIKNLHADIQEL 690 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALH--SQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 + + + L+L Q + Q + A +L Sbjct: 691 ADKIQAELAAFNPDSDPKDLLETNQLSLDTVKQLSKFYDSWLAIRQEWIISHAALCKSLT 750 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 F+ Q L ++ + + + D Sbjct: 751 DHGFESVAEAQTYAKSRQQLETDQETVTSHHKAVADLRAKLDT---------DAYRDKAA 801 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 A +E ++ +A Q+ R T + + + +++ Q+ ++ Sbjct: 802 ATIPDLESLRAAVATGEQEYRSLTQRTAAMDRSHENLCRLQEKYAQTKQEWDTKVSEIAG 861 Query: 880 WGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE------- 930 + L+ ++ K + L ++ +ANQ ++ + G Y R + Sbjct: 862 YERLSQVLNGDNAKKTTLSAYYLSKRLGQVIFVANQLISDVSGGYYQIRHNDQYEADRNQ 921 Query: 931 ---ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDE 984 L +E+ + + D V ++LSGGE F SLA+A+ALS++V ++++F+DE Sbjct: 922 KYHGLGIEMYNGAE-DQVVPPKSLSGGEKFYCSLAIAMALSEVVQRERGGITLENIFIDE 980 Query: 985 GFGTLDSETLDTALDALDALNAS-GKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 GFG+LD++T + + AL L G+ +G+ISHV ++ IP+Q++V+ ++L+ Sbjct: 981 GFGSLDNDTREAVMSALHHLQQDGGRCVGIISHVSELQGEIPLQVQVRNYQSGNTTELKP 1040 >UniRef50_C7MH53 ATPase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MH53_BRAFD Length = 1022 Score = 303 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 210/1092 (19%), Positives = 349/1092 (31%), Gaps = 119/1092 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK+ LRL + G IDF + G+F + GPTG+GK+T+LDAI ALY + Sbjct: 1 MKLHHLRLTGIGPFAGTVSIDF--AALGAGGMFLLEGPTGSGKSTILDAIVYALYGQVAG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV---PRVELA 117 + + T + ++ FE YR R + G + L Sbjct: 59 TATSADRIRSQFAPPTEASVVDLVFETASGLYRVRRQPEFQRPKMRGTGTTKEHAKAVLW 118 Query: 118 RCADGKIL-----------------ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA 160 R +++ A ++ + GL +FT+++LL Q +FA Sbjct: 119 RIGSPQLIDEVIADTAGGGSGVEAIATRIDEVGREIQRAVGLSRDQFTQTVLLPQNEFAR 178 Query: 161 FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS 220 FL A ER +L+ + GTE Y ++ + E K A+ E++ Q E Sbjct: 179 FLRAGTGERQAVLQRVFGTETYARVEKQLEEMRKQAKREVDAAQQTLGTALARFTEATAL 238 Query: 221 LTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL 280 + L + L + + A A Sbjct: 239 EGEQVTTLQEHATALRLDALAALAGEHLAAVAARADDARTAATAAGTTEQEARAAADAAT 298 Query: 281 AALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 + R L R+ A+ R +++ T + L A+ + Sbjct: 299 RTRTRIDRRRELDALAARLERERPAVERSRTALQQDETARP-VVELLRRRDSAASAAAEA 357 Query: 341 LQQQQQSLNTWLQEHDRFRQWNNE-------------PAGWRAQFSQQTSDREHLRQWQQ 387 ++ T EH + E G S+ L + + Sbjct: 358 IETLTALATTTRAEHPQLVDLLEEDAPEEALTAAAEEATGRAGALSELVDLEAGLPERET 417 Query: 388 QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 L L TA+ + A G + A +V Sbjct: 418 TLAARRDTLATQQKNLEAATAELGERPAQRAALVEQRDGARATAAGLGDARAAHRAAQEV 477 Query: 448 AIQNVTQ-EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 Q + + ++ A+ + + A L+ C Sbjct: 478 ERARTAATAQEKTVETARAAAEAALRTAREHAETEAALRRRRFAGIAAELAADLEDETAC 537 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 P+CG+ HP Q++A Q QR E Sbjct: 538 PVCGALEHPHPADPAEDAVSP-----------------------EQVEAAEAQRQRSEQA 574 Query: 567 AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIA 626 Q Q+ + + P A+ + +Q L+ QI Sbjct: 575 QSRAEQAHALARQKLEQLQEEAGEHT-PDSARAAVAQAKQAVDAAAAAETQVAALEEQIT 633 Query: 627 AHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTA 686 AH+Q Q E+ + T + + + +A + + S R+ +A Sbjct: 634 AHDQHTQQLTAAKEETALAVERERTAIDEAARLLEADRAKVAAARGDDSSIADRRRAHSA 693 Query: 687 LQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 L L A Q Sbjct: 694 RARAATALCQALRR---------------------------------------RADAEQR 714 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 A A+ D AL +S A AA++ + T++++L Q + L AE Sbjct: 715 AADASAEADRALASSALVTADAARAAVLPAEERTRVQKLLQARAVDESR---LADGLAED 771 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 + + V + L RE ++ A R +T Sbjct: 772 GIEDTTATDEAREQAQAAVLATTEALTSAQTAAREAAGIAARAEGVAERSAAARTALETA 831 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDK----FRKFAQGLTLDNLVHLANQQLTRLHGRY 922 Q+ +++ + L + D + LD ++ AN +L G Sbjct: 832 SAQVRAVSESAGVTVRVADLATGRSADGDRVQLSTYVLMWRLDAVIEAANARLALFSGSD 891 Query: 923 LLQRKASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---S 972 L + + L++ V+D D VR TLSGGE+F VSLALAL L+D+V + Sbjct: 892 LELLRDTGARGARKTGLDLLVLDRRT-DQVRVPETLSGGETFFVSLALALGLADIVMGEA 950 Query: 973 HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKK 1032 ++++LF+DEGFG+LD ETL+T + + L SG+ IG++SHV MK +I QI V++ Sbjct: 951 GGVQMETLFIDEGFGSLDPETLETVVREIGRLAESGRVIGIVSHVGDMKAQIAEQIHVRR 1010 Query: 1033 INGLGYSKLEST 1044 S L T Sbjct: 1011 -GAYSRSSLSVT 1021 >UniRef50_B0RFM2 Putative nuclease n=2 Tax=Clavibacter michiganensis RepID=B0RFM2_CLAMS Length = 1010 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 186/1067 (17%), Positives = 350/1067 (32%), Gaps = 81/1067 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L L+ + E IDF +GLF + GPTG+GK+TL+DA+ ALY Sbjct: 1 MDLHRLTLQAIGPFADEHVIDFAE--LGRSGLFLLEGPTGSGKSTLIDAVVFALYGSLAS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQV--------P 112 + + E E+ FE +R S R + G Sbjct: 59 EGSSRDRLHSHHASPGVEPYVELVFETAAGIHRVRRSPQHQRPKARGTGTTNQNAAATLV 118 Query: 113 RVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 R+ G+++ ++ + GL +F ++++L QG+FA FL + ++R + Sbjct: 119 RLSSPDADAGEVVGTSTQEVGTEIQRIVGLTRAQFVQTVVLPQGEFAEFLRSTGEQRRLV 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 L+ L GT +Y + + + E +A+ + A+ + E + + D Sbjct: 179 LQSLFGTAVYDRTAKQLAEMRTAAKARTDAADARVAEALTGLREATRVDALEVADAPDTV 238 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 + L +++ R + A + + +AL + + A + Sbjct: 239 RLLAELADAAEEARTDHERARQDAATALADAERVSRALDRRRALIAREETVRA--EAAEI 296 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 R+ E A A A AA ++ + Sbjct: 297 AGLARRVEEARRAAAVAGPLAARDRADAARVAAEAEDDAARAACRAERTALADATAPALA 356 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 + D A A+ R +R + + E + A A + Sbjct: 357 ERRDALVAELTTLADAEARERGLPRRRADVRAAEDAVAAREAAADEAEAALAERPAGRIP 416 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 A+ A A + R + ++ + T AL+ Sbjct: 417 LVEARDAAAAAAGGVDAARAAVAEAEATR--RRVAELEELEARITAAREALDARSATATT 474 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 + A+++ Q +L+ PCP+CG+ HP P ++ Sbjct: 475 AVRHEAELR----QRKIRGLAGELARELEDDAPCPVCGAVDHPHPAPSAPGHPDDDEIER 530 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 A + + L A T + + E + + +A + Sbjct: 531 AAEARARAERTQ--GDAAAALAAETARHEVAEAALDGITVEAADAEVAARAARLAEAEAA 588 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 + ++ ++ + + ++++ + ++LL Sbjct: 589 GGALRAAEAAVVAHD--------AETERIRTRRDDARAALSGLRERVIRARELLAEDEAA 640 Query: 653 YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEE 712 + D +E EA + AL +++ L Sbjct: 641 VRAVHAERDADEG--EAGGHEADDADADAPRVAALVADRAAERAVVDRLIALAAARERTA 698 Query: 713 TVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 A+F AL F AA Sbjct: 699 ADAA--------------------------------ARAAEFAQALADHDFATADGARAA 726 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL 832 + L + + E ++ + +A D A ++ Q Sbjct: 727 ALPPAELEAVARRVAAHEREQAVVAEGLVDPE--IATLTGAEHPDPDAARAALDAAQAAA 784 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 + ++ + L + R++ Q + E + + G Sbjct: 785 RTSAERAARARDRAERSAEALARHDAARRESARAGDQARAAIRMAEVANAI--TPENTRG 842 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRL-HGRYLLQ---------RKASEALEVEVVDTWQA 942 + +++V AN +L + GRY L+ R L +++ D Sbjct: 843 TTLGTYVLLRRFEDVVQAANARLRIMSSGRYELEVSEEREATSRSRKTGLALQIRDHVV- 901 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALD 999 D VR+ + SGGE+F SLALAL L+D+V + ++ +LF+DEGFGTLD ETLD + Sbjct: 902 DRVREPASFSGGETFYASLALALGLADVVQAEAGGLQLGTLFVDEGFGTLDPETLDAVMS 961 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 L L++ G+T+G++SHVE +K+R+ +I+V++ S L ST A Sbjct: 962 ELGRLSSGGRTVGIVSHVEELKQRVADRIEVRRRPDGS-STLTSTVA 1007 >UniRef50_B7GM49 ATPase involved in DNA repair, SbcC n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GM49_ANOFW Length = 1119 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 227/1129 (20%), Positives = 409/1129 (36%), Gaps = 106/1129 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L + L+S + + IDF + GLF I GPTG+GK+++LDA+ LALY R Sbjct: 1 MKPIRLTIAGLHSFRQKETIDFEK--LCEGGLFGIFGPTGSGKSSILDAMTLALYGNVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVE--LAR 118 SN + +M E FE++ + ++ RA + D V + Sbjct: 59 ASNQTNG---IMNHAENELFVSFTFELQNASGAKRYTVERAFKRADALRIRSVVSRLIEE 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + ++ADK + E L GL+ FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 GTERVVIADKTRLVDEQVKQLLGLEMKDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG +++ + + A +LE ++ + +G+ + EQV+ +L +E ++ Sbjct: 176 LERYGDELNKKLKHKLAEASAKLEAIKGEQAGLGDASKEQVEKQKQALAEKKEELERAKN 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 + + + + Q E + + L + +EE+ + ++ A L P+ E Sbjct: 236 KLRHIHEQYEKEKQLWQWQCEKEKVEHELNKWREQEEQMKQLAQTYERSKEAERLVPYME 295 Query: 298 RIAEHSAAL-------AHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 ++ + + + + Q+++V + R ++ + Q+Q+ L Sbjct: 296 QVERSAQEVVSWNKKASELTSQLQQVRMMYEQANKQYEQCRAKKNEEEPKALQKQEQLKQ 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQ----QLTHAEQKLNALAAITLTL 406 LQ R + A RA + + Q + + T K L Sbjct: 356 ALQTLALMRSLEQQQAKLRASLREIEQQEQQALQMVETCTKEYTTWSAKQAELKKQWEEK 415 Query: 407 T-----ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + + A + +Q L L + +QK L+ V ++ + A Sbjct: 416 KVDVHVKERLEQAYEIKKRIQLQQQQLEELEREKENKQKVYETLKQTYDEVMKQMKESEA 475 Query: 462 ALN--------------EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP 507 E ++ Q + K E +L+ G+ CP Sbjct: 476 RFVATFRYVESLYHRVCEREKQVAVLIYQKKEEKKQMEAARLHDLAATLAERLRDGEACP 535 Query: 508 LCGSTSHPAVEAYQALEPGVNQSRLLA---------------------------LENEVK 540 +CGST HP + + + + Sbjct: 536 VCGSTHHPNRAKGKEMASDEEAMERMEHSIQHGEQLMVAMQQMKMQVEQLAELMARQPLP 595 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 + + R + LQ E E ++L QD ++ + + Q Sbjct: 596 QHVDVEKVKREVEETPLCSLQEAEVEQKALYQDYVECRERVRHYMEQWDEQKQKQQQYAY 655 Query: 601 WLDAQDEHERQLRLL------------------------SQRHELQGQIAAHNQQIIQYQ 636 ++ + R+ Q + + ++ Q Q Sbjct: 656 QMETIGQQIREWEEKCLEKRARVEEEKKMWHKTFSDVSFEQVDAMLSDLREREREAQQLQ 715 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTP 696 Q+IE+ +L + A E ++Q+ + Sbjct: 716 QRIEKSVIVLDDKRAELERWKETYQDMTKQKAQCMTEWNMYKQQYEQYKRTLPEEIDEER 775 Query: 697 ILETL---PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + + + QS + EE W + +Q L + +Q A + ++A Sbjct: 776 VQQQIVFMEQSLQRMKREEEEAYARWMNLQQQLQTLQADKQAAHVALQEAEKRKKEAAYA 835 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 LQ S F A+ +DEQT Q+ Q Q + + Q + E + Sbjct: 836 LAEQLQTSSFTAVDDVRASRLDEQTKQQIAQRIQQYNDVLTKLQNEWQRLHEAMNG---- 891 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + E+ Q Q++ E+ G + + + L Q+ Q+ Sbjct: 892 ----AVMTKQQWEETMYAYEQVKQQVDEHMRQLGSLEAIVADLETKHARFVQLQQERMQL 947 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + V + L ++ G+ F +F L ++ A+++L L R + Sbjct: 948 EKVVGQYEELQKVL---RGNSFVEFIAEEQLVHVTRYASERLGELT-RQRYAIELDSEGG 1003 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDS 991 + D R TLSGGE+FL SL+LALALS + + + FLDEGFGTLD Sbjct: 1004 FVIRDDANGGVRRPVTTLSGGETFLTSLSLALALSAQIQLRGEYPLQFFFLDEGFGTLDQ 1063 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 E LD + AL+ L A IGVISHV+ + R+P ++ VK G Sbjct: 1064 ELLDVVMSALERLRADNMAIGVISHVQELHARMPKRLIVKPAEPSGKGT 1112 >UniRef50_D0WRP2 Putative nuclease sbcCD subunit C n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WRP2_9ACTO Length = 1006 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 178/1081 (16%), Positives = 347/1081 (32%), Gaps = 113/1081 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + + IDF + GLF + GPTG+GK+T++DA+ ALY Sbjct: 1 MRLRRLTVSGIGPFADTFSIDFD--ALTAGGLFLLEGPTGSGKSTIIDAVVWALYGGVAG 58 Query: 61 LSNVSQ-SQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 + + + E ++ F V+ +R + + + N +L R Sbjct: 59 GRDSTDARMRSTHASPSRESFVDLVFSVEAGTFRVRRTPQWTKA-GNKNPTNASAKLWRL 117 Query: 120 AD----------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKER 169 ++ G+IL K A L GL +F ++++L QG+FA FL +R Sbjct: 118 SESAVEAQQFDAGEILEAKPAGTGAEIARLVGLSREQFLQTIVLPQGKFADFLTLDSTKR 177 Query: 170 AELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ----ASGVTLLTPEQVQSLTASL 225 LLE++ T Y +++ ++ E+ +A+++++ + + G+ + ++ Sbjct: 178 TALLEQVFDTSAYRRVAELLKERAAAAQSKVDSARGEWASSVEGLATALKLEGEAKAELA 237 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 + + + L ++E + A ++A AQ S Sbjct: 238 EAADAAGDPADAVRTAALAAAAVLRAEEESESAEEESALAAKRARERAVAAQEAADLASR 297 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR------LQSTMALRASIRHHAAKQSA 339 Q L +R+ + + + + L + +A + + + Sbjct: 298 LQKRSRLLACRDRLRAEEPEIDKLDESLAAHALAAGVASFLAAFDRAKAELGQAERRFAL 357 Query: 340 ELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 + + + + ++ + + L +++ T A + L Sbjct: 358 LDASDRSPHDVDAATLESQTALLETMTSLTGRLTELAAVEKELAASRRERTAAREVLRRA 417 Query: 400 AAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 A A A + + L A + + + + + Sbjct: 418 QEKVAAARAQASALPQAILR----VEERLTAEEAEASRVESMELEAASLAKAAARFADLD 473 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 A ++ ++ L G+ CP+CGST HPA Sbjct: 474 RARSASKEANAAAAFEEARLLRDEQTLAWTASMSAIIAGGLSEGEACPVCGSTEHPAPAP 533 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 ++ R ++ K + Sbjct: 534 PSNVKAT-----------------------REDVEDAEKGAAAARGLLAETEKRAVRAQA 570 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 + + A L + + Sbjct: 571 EVASAEADLKGLTRESVASA---------------------------------------L 591 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 E+ + L + + E + S Q+E A + RI L +E Sbjct: 592 ERTRSELASARRAQRKAAASQVELRDLRERSEAAGSSLSAAQSEQAAAEARIAGLDAAVE 651 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 + E + H + + ++ + A L + + AL Sbjct: 652 RAQARIVPELAGYETISERL-KAHVERANAQRRLVEAVRELLGARGQLDAREGELSAALS 710 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 + F D A A M + + +A+ D Sbjct: 711 EAGFADATAARKAFMPREAAEAARTRVAEHRQASHDVARDLAAPE--IAELTGDEAPDVE 768 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 E+ + ++ R QL ++ + L + + Sbjct: 769 GTARLAEEAAETSRAAQRRAAVANERSLGARAQLGVVSEREEAWARLQSSAGPVLRLANL 828 Query: 880 WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------- 930 N+ S F + ++ AN++L + GRY L R + Sbjct: 829 A---NAGSDSITKIPLATFVVRHRFEQILDRANERLADISLGRYQLARSDEKERGSREII 885 Query: 931 -ALEVEVVDTW---QADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 L V V+D A R R+LSGGE+F VSLALALAL+D+V + +++L +D Sbjct: 886 TGLSVTVIDRDGEADGAAKRSPRSLSGGETFYVSLALALALADVVRAENGGIALETLLID 945 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFG+LD +TL + L L G+ +G++SHV MK+ I ++ V+ + G G S++E Sbjct: 946 EGFGSLDEDTLGLVMSTLTGLARDGRAVGLVSHVAEMKKMIAERVTVRPL-GDGSSRVEI 1004 Query: 1044 T 1044 Sbjct: 1005 R 1005 >UniRef50_Q826W9 Putative ATP-dependent dsDNA exonuclease n=6 Tax=Streptomyces RepID=Q826W9_STRAW Length = 999 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 195/1094 (17%), Positives = 353/1094 (32%), Gaps = 154/1094 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + G +DF ++ GLF + GPTGAGKT++LDA+C ALY P Sbjct: 1 MRLHRLDITAFGPFGGAQTVDFD--DLSAAGLFLLHGPTGAGKTSVLDAVCYALYGAVPG 58 Query: 61 LSNVSQSQ--NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR 118 Q + +E V G AR + G +R Sbjct: 59 ARQSGQGMTLRSDHAAPSTRTEIRLELTVAGRRLEITRQPPWARPKKRGAGTTTDKAQSR 118 Query: 119 C-------ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 K L+ ++ E L G+ +F + +LL QG FA FL A + R + Sbjct: 119 LREHDAAAGSWKDLSRSHQEIGEEITQLLGMSREQFCQVVLLPQGDFARFLRADAEARGK 178 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQ-------------- 217 LL L T + ++ + E+ ++ E+ A + Sbjct: 179 LLGRLFDTHRFAEVEKRLAERRRAVEAEVRAGDATLLADAHRMQQAVGDVVEVPLPDLAP 238 Query: 218 ----------------VQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASR 261 + L + +AQ + L+ + LQ+ + Sbjct: 239 GDPGLAETVLTWAAVARSTARERLTLAHCARTAAESAQAAADRVLDDVREVARLQRRYTE 298 Query: 262 RQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQ 321 ++ + + + + A + P + A T L Sbjct: 299 ARERAALLEERSDAHREAQTRMERGRKAEAVAPALDLRDAAEAEHRRAATDEARARTALP 358 Query: 322 STMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREH 381 T A + AA + A + L R+ + Q+ +D + Sbjct: 359 ETFADAGAPGLAAAARKAA-----EELGGLESARRAERRLGELTEERASLDRQERADDDV 413 Query: 382 LRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 L+ + L E L A + + Sbjct: 414 LQDAESWLATWEATRADLQAGIESAQEAATRAEQ----------------LAVRRDPAQA 457 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 ++Q+ + A R+ + D+K C Q A L Sbjct: 458 RLAAARRRDRLSQDTDEARARALAAREHATDARVHWLDLKEQCLQ----GIAAELAAGLV 513 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 G PC +CGS HPA ++ E +L ++ ++ Sbjct: 514 DGAPCAVCGSLDHPAPARKITGHVDRETEE--RALTAYQRADETATVDERRLGSVREE-- 569 Query: 562 RDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHEL 621 P E R ++ Sbjct: 570 ---------------------------LAAATAEAGDAPTAHLAQEAAELERQHAEARAA 602 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 + Q++ Q + + E+R A + D + A+ ++E + Sbjct: 603 ASGLHTARQRLAQAELEHERRVADQQQAALRAAARVSHRDTIDRERASLEEELAKARGAA 662 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + + A ++++ T +L + Sbjct: 663 DSVAARAAQLERRTALLTDA--------------------------------ADAVRTAE 690 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 AQ L+ A A+ A + FD AAL+D+ L++ +++ + ++ Sbjct: 691 DTAQRLKDADARLADAAFRAGFDTPGDAAAALLDDAAHRDLQRRLDAWQSEEAAVRAVLA 750 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + A Q T ++LR+ ++Q ++ + Sbjct: 751 EADTAAAARQPAAGLAAAEETAE---------LAARRLRDTASAQDAAARRCAELDRLST 801 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGS-----KEGDKFRKFAQGLTLDNLVHLANQQLT 916 + T ++++A + ++ + + L + + + L+ + A +L Sbjct: 802 RALTSVRRLAPLREEHDRVARMAGLAAGTSADNERKMRLESYVLAARLEQVAAAATARLR 861 Query: 917 RLH-GRYLLQRKAS------EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 R+ GRY L L + VVD W RDT TLSGGE+F SLALAL L+D Sbjct: 862 RMSSGRYTLVHSDDRAGRGRSGLGLHVVDAWTG-RERDTATLSGGETFFASLALALGLAD 920 Query: 970 LV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPV 1026 +V + R+D+LF+DEGFG+LD +TLD LD LD+L +++G++SHV ++ RI Sbjct: 921 VVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERDRSVGIVSHVADLRRRITA 980 Query: 1027 QIKVKKINGLGYSK 1040 Q+++ K + Sbjct: 981 QLEIVKGRTGSVVR 994 >UniRef50_C6WKU1 DNA repair exonuclease, SbcC n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WKU1_ACTMD Length = 962 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 186/1052 (17%), Positives = 337/1052 (32%), Gaps = 104/1052 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L L G +DF ++GLF + G TGAGKTTLLDA+ AL+ + P Sbjct: 1 MRLHRLELSAFGPYPGREVVDFD--ALGADGLFLLHGDTGAGKTTLLDAVAFALFGQVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + E + +E V+ S R + G Q + LA Sbjct: 59 ARGEVKRLRCDYASPDVETVVSLELTVRERRLVITRSPEYERPKKRGGGTTRQNAKAALA 118 Query: 118 RCADGKILADK-VKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 + + + + +L G+ +F + +LL QG+FA FL A ER +LLE+L Sbjct: 119 WVSGWEGEGHGRIDEVAREVESLLGMTAHQFFQVVLLPQGEFARFLRADTGEREKLLEKL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 GTE + + E+ EL +L + E ++ + L+ Sbjct: 179 FGTERFLAVEKWFRERRAERGRELRELTEANVRLAGNVAEAARAEQPEDGGDPAWLEALL 238 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 + R EL + + ++A + + + A Sbjct: 239 GGLAE------EAGRAQELAGTTAEARTGAERAWQGARDLEALVGRVRRAHDELVRCAED 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 E + A ++ V L+ R ++ A + A + + + + Sbjct: 293 EPERKRLLDEAEAARRAAPVVQALRGGDRARVALEGAEAAELASAKAVGALMGGVVADDP 352 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 R R + T E R+ ++ L + ++ E+ AL Sbjct: 353 RAEG-----ERCRDEAGGLTRLAEEAREQREALRALDAVVSRR--EVAAARLAELTAALE 405 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 E+ + V + A + + A R + Q Sbjct: 406 GAPERLRSAREAVEAAKLARAALPEASARAKAATALPAAVRASDEA-EAARSVAVDVHQA 464 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 D + Q +L G PC +CG+ HPA A+ Sbjct: 465 AVDARQAVRQRRLDGMAAELAGELVDGLPCQVCGAGEHPAPAAFDGEAVTAVDEDRAGAA 524 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 V A+ ++ ++ ++L + + A L + L Sbjct: 525 EAV---------------ALERRRAAEDAAYRALGAVDALRSAVGDRDPAELVAEHRELA 569 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + ++ R L + L + A + ++ + + + Sbjct: 570 GLAALTAERESALRGLETGT--AALTEERAELERDVVGLEARGSELAATTAERAARLEQA 627 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 + + A A + + + ++ + + + Sbjct: 628 REGFPDVAARRAHLLSAADALDELARRRAEVLGAAERAAQLAGEVAEQVAEAGFATAADA 687 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + EQ L + + A + + + Sbjct: 688 REAVRTAEQVAGLERRVREADAARAAAEAVVADHPDVDPSVEVDAGGA------------ 735 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 +R + + A + R L + LA Sbjct: 736 --------------ERRFREAGREAEAAAGASSAAVGRLARAEELAERLRAAWARLAPVE 781 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 + RE I + + + L ++ + Sbjct: 782 AEYRELDAFTDVINGRGQNTESMTLRTYVLAAKLEE-----------------------V 818 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQ-------RKASEALEVEVVDTWQADAVRDTR 949 A LD + GRY R A L ++V+D + R T+ Sbjct: 819 AVAASERLDRMSQ----------GRYRFVHSTEAGPRGARGGLGLDVLDDYSG-HQRPTK 867 Query: 950 TLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGK 1009 TLSGGESFL SLALAL L+D+VS +D+LF+DEGFGTLD++TLD ++ LD L A G+ Sbjct: 868 TLSGGESFLASLALALGLADVVSQGAVLDTLFVDEGFGTLDADTLDLVMNTLDDLRAGGR 927 Query: 1010 TIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +G++SHVE +++RIP +++V+K ++ Sbjct: 928 VVGLVSHVEELRQRIPTRLRVRKARAGSTLEV 959 >UniRef50_B0VTC7 ATP-dependent dsDNA exonuclease (Suppression of recBC) n=15 Tax=Acinetobacter RepID=B0VTC7_ACIBS Length = 1198 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 276/1191 (23%), Positives = 476/1191 (39%), Gaps = 156/1191 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILS+R+KNL SL E IDF P A GL AI G TGAGK+T+LDA+CLAL++ PR Sbjct: 1 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR 60 Query: 61 LSNVSQSQNDL-------------MTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPD 106 L + D+ + R T AE+ F + + Y A W RAR P+ Sbjct: 61 LKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPN 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ + L DG +LADK K E +T L + +FTR++LL+Q + AFL A+ Sbjct: 121 GKLQSVQRHLKCLTDGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARN 180 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ER ELLE LT + I+ +I + F + + ++L+ + +L+ E++ + T Q Sbjct: 181 SERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQ 240 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL--- 283 +QL + + W R+ +L+QE +QQ Q ++ + L Sbjct: 241 QAEQNYQQLEQQKHVLDKQQQWFERKAKLEQEVQAKQQLFQTQQNHHQQLASEREQLKRL 300 Query: 284 --------------SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRAS 329 Q + L P ++ L I + ++ + + Sbjct: 301 EVFSEIRPQVFQQAQNLQTLQQLEPQIQQAQTKFNELVQIFETGQKQYQLAEQQLKQTID 360 Query: 330 IRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA------------------- 370 +++Q Q E+ + ++ + + Sbjct: 361 FEQQHQHTLNQVRQSIQERAFIADEYKKCKEKRHVLEQKLSPLQQQQNAVQQQIAQLEQN 420 Query: 371 --------------------------QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 Q Q + + + + T A QKL+ + Sbjct: 421 KIHLQQQLIQTQQYAVLDKGLSAHLHQLGQFIQNYQAIEEQLGNPTFARQKLSEAKSELE 480 Query: 405 TLTA-----DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 LTA +++ L Q + + + V I + K +L +Q T++ TQ Sbjct: 481 QLTASLGTVEQIELKLEQQRKDKDQKLAQVTQLDLIQQKIKIYHELYAELQQFTEKHTQA 540 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKT---------LEAQRAQLQAGQPCPLCG 510 +A +++ + Q K E+ I +E RA L+ G+ C +CG Sbjct: 541 SAQEEQLKTVCQLAEQDYQTAKNEREKLQHILQQQRLLHTENIEQLRANLKEGEACLVCG 600 Query: 511 STSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQ---LDAITKQLQRDENEA 567 ST HP A+ + + + V + + Q L +L++ + Sbjct: 601 STHHPYRIDDSAVSKALFDLQQQQEQQAVALEQTKFNVWQTQQHALTQCRAELEQVQKYL 660 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL-----SQRHELQ 622 L+ + L Q+ + + ++ + L +E + + S+ L Sbjct: 661 AQLQAKQTNLQQELEQAFNLNQLHIELNQAPEQILQTLNELRQATQTAISLFDSENLRLT 720 Query: 623 GQIAAHNQQIIQYQQQIE----------------------QRQQLLLTTLTGYALTLPQE 660 I HNQ I Q+ ++ + T Sbjct: 721 QAIKQHNQLIQTIQRNESLLNTAQQWQQQVQHIVECLSETEQHAWQQASSQTAKQTWAIL 780 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 D L ++Q +Q ++Q+Q EL L ++Q+T ++ + Q+ + + E Sbjct: 781 DARAKQLEQQEQLSQRFEQQQQELKMLTASLEQMTKQIDEIDQNLQEITLKGQQNNEKAV 840 Query: 721 QVHEQ------------CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 + +Q + +++Q Q A Q ++ + F+ QA Q Sbjct: 841 SLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTRQHFEQQKQALDQLKHQH 900 Query: 769 FL----------------------AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 A + +Q++ N+ A+ L+++ + Sbjct: 901 QHTEQHQQQIDGQIQNWLKAHTDFQASDLTALIQINSAQEQDIRNRLNHAERLLSEVSSA 960 Query: 807 LAQHQQHRPDDGL-ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQT 865 L Q+ + + E++ + KL+ + ++ +L+ N +QQ Sbjct: 961 LKTMQEQLSEHLQTQPDIEYEKLFTLIQDNIAKLKAQLEVRDGLKLKLELHQQNLAKQQK 1020 Query: 866 LMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQ 925 +QI + Q+ W ++ LIG +G +FR +AQ LD LV ANQQL L RY L+ Sbjct: 1021 YAEQIQNIQQEEHRWSRISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLK 1080 Query: 926 RKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEG 985 R L + ++D R +LSGGESFL +LAL+LA++++ S +I+SLF+DEG Sbjct: 1081 RLDQS-LSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEG 1139 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 FGTLD+ +L ++ALD L G+ + +ISH++ M ERIPVQI+VK + Sbjct: 1140 FGTLDASSLHMVMNALDQLQNQGRQVILISHIQEMHERIPVQIQVKPLGAG 1190 >UniRef50_A7Z370 YirY n=2 Tax=Bacillus subtilis group RepID=A7Z370_BACA2 Length = 1130 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 206/1140 (18%), Positives = 431/1140 (37%), Gaps = 117/1140 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L +K L+S + E IDF + G+F I GPTG+GK+++LDA+ LALY + R Sbjct: 1 MKPILLTIKGLHSFREEQTIDFAG--LSGAGVFGIFGPTGSGKSSILDAMTLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +N + ++ + F ++ ++ + + + ++ L Sbjct: 59 AANNTHG---ILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIK 115 Query: 121 DGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D + +LADK + + L GL FTR+++L QG+FA FL+ K ER +L+ L Sbjct: 116 DEQTVLADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNL 175 Query: 180 EIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E YG ++ + + + A + ++ A+ SG+ + ++ + ++ Sbjct: 176 EQYGDRLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKQAEQQFHEANERLEEAEKK 235 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + + ++ LQ E ++ ++ L A+ A L P+ +R Sbjct: 236 RVRAKERFENHQEIWNLQTERDEYERREKKLEERHPYITDLTERLKEAETALALEPYADR 295 Query: 299 IAEHSAALAHIRQQIEEVNTRLQ-------STMALRASIRHHAAKQSAELQQQQQSLNTW 351 E H ++ E + + + R H A+Q +L ++++ Sbjct: 296 YTEAVRRKQHAEREHELAKRKSEAETVSFTRQNEAYEAWRAHKAEQEPKLVKEEELYQRL 355 Query: 352 LQEHDRFRQWNNE-----------PAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA 400 + + E + A Q ++ L + Q + +++L A+ Sbjct: 356 SAIEQKLLEAKKEAEKTNAEHSKKEEEYEAASKQLAGVKDRLTRGQNRQNELKEELKAVQ 415 Query: 401 AITLTLTADEVATALAQ--HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 + A LA Q + + L Q+ +K + + E+ Sbjct: 416 VTADERKKCQTAAQLAAGFQQTQEQITKERANLTTQLKNVEKLNGESESLTAKAKTEEED 475 Query: 459 RNAALN--------------EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 A ++ + + AD++ E+ + +L G+ Sbjct: 476 ITHAYQTLQTVYHMVCETERSLKAAAERADKTQADLRRRSEEARTAALTKELSEKLIEGK 535 Query: 505 PCPLCGSTSHPAVEAYQAL-----EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 PCP+CGST H + ++ AL +E L +E T + L+ + + Sbjct: 536 PCPVCGSTQHDRPRSAHETFSPDTAVQEQLQQVEALLSEAAALSQEVLTAKVALEEQSGR 595 Query: 560 LQRD------------------------------ENEAQSLRQDEQALTQQWQAVTASLN 589 + E + ++QD ++ ++ + ++ Sbjct: 596 FTEECPFLQSVRVPELEAASSISGRPLDEAFSAVRLEWKQMKQDMLSVKEKVTRLISAHQ 655 Query: 590 ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN----------QQIIQYQQQI 639 T++ + + + +++ +LR + E + + QI +Q I Sbjct: 656 QTVKQAEQLAERIRYEEKEAGRLRHSLEELESLSESRLNQYNEVCGDIPPNQIDAWQASI 715 Query: 640 EQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ------ 693 +++ + ++ E E Q+ ++ + EL R+QQ Sbjct: 716 DEKDRQAEECEKRIETSIAFLKEHEEEKERLQEMKHRLERERLELHYASERLQQVIDGYE 775 Query: 694 -----------LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVL 742 ++ LE + Q +L +E + + +Q + ++ Sbjct: 776 QELGTAAEETSISAKLEAVRQELQLLKSKEQSLFDALKQAQQSLNDAKGRESGSLMSLRD 835 Query: 743 AAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ 802 A SL+KAQ + + + F + +L+ + ++++ + +Q +++ Sbjct: 836 AETSLEKAQNDWRVRSKNTGFTEPDQVKKSLLPQGRAEEMKKEIDEFLDTSKQLSANISR 895 Query: 803 TAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQ 862 + LA+ + + ++++ L Q + +G + ++ Sbjct: 896 VTDKLAERRISEEEWTASVSL--------LKQAEAESGAAMEEKGAQAKAFAVMQKQHKR 947 Query: 863 QQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRY 922 + + ++ Q++ L S+ +G+ F ++ L+++ A+ +L L + Sbjct: 948 FKEIEAELKSWQTQIDRLDKLQSVC---KGNTFVEYLAEEQLESVARDASARLGALTRQR 1004 Query: 923 LLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSL 980 SE + D R +LSGGE+FL SL+LALALS + + + Sbjct: 1005 YAILVDSEG-GFVMRDDANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFF 1063 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FLDEGFGTLD LDT + AL+ L + ++GVISHV+ ++ R+P ++ V G Sbjct: 1064 FLDEGFGTLDQGLLDTVVTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEPGGKGT 1123 >UniRef50_A0PY82 Exonuclease, putative n=3 Tax=Clostridium RepID=A0PY82_CLONN Length = 1176 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 204/1202 (16%), Positives = 464/1202 (38%), Gaps = 182/1202 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L++ LNS + E I+F R GLF I GPTG+GK+T+LDAI +ALY + R Sbjct: 1 MKPRVLKISGLNSFEREQVINFNR--LTEKGLFGIFGPTGSGKSTILDAITIALYGKITR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKG----EAYRAFWSQNRARNQPDGNLQVPRVEL 116 + + T + + EFE+ G + Y A + +N N + R+ Sbjct: 59 TNKG------FINTTTKDLIVSYEFEIGGAKDRKVYLAERNIKINKN-DRYNTKYARLIE 111 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 KI+A+ + + GL FTRS++L QG+F+ FL +E+ +LE + Sbjct: 112 KNGDKSKIIAEGPTELQNQIHKIIGLTVDDFTRSVVLPQGKFSEFLKLGGREKRNMLERI 171 Query: 177 TGTEIYGQ-ISAMVFEQHKSARTELEKLQAQAS-----------------GVTLLTPEQV 218 E YGQ + + + + E + LQ + + L E++ Sbjct: 172 FALEKYGQSLVEKIKKVRNTNLKERDVLQGELKKYENLTEEDYKAKQQELQLELQNEERL 231 Query: 219 QSLTASLQVLTDEEKQLITAQQQEQQSLNW------------------------------ 248 ++ + + K++ T Q++ ++ Sbjct: 232 KNEKKQIDEKYEMYKEVWTLQKELDAFIDKKLKLQEKLEDINLKRESLKRGQNAIKIKPF 291 Query: 249 LTRQDELQQEASRRQQALQQALAEEEKAQPQLA---------ALSLAQPARNLR------ 293 + + + ++ L++A+ E ++ + LR Sbjct: 292 MDEVEATNKNIKDNREKLKEAIDNLEGISEKVKVTEENYIVSEKEKDERIPELRNMERDF 351 Query: 294 ----PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + + +R + + + ++ + I + K + E++ ++ LN Sbjct: 352 LLAIDTINKTEKLEMEVNSLRNEYKSIKSKRDKIVKQLKEIDDNKKKLAIEIKDIEERLN 411 Query: 350 T--------------------WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQL 389 + + + ++ NN+ + + + + + Sbjct: 412 EIKIDPEYREKLQYALQIENDYKKSLNNKKELNNKLQEKEKNLKEVSKEYNGVLSSKNSQ 471 Query: 390 THAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI 449 + ++L I + + L + E + + + + +I + + L+ I Sbjct: 472 DNLVKQLEEKNKILKENNPGDNSLLLEKSQELNVIAKKVEEVINEINRK----SDLEKII 527 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLC 509 +++ + L E++ + ++L ++ E + ++L G PCP+C Sbjct: 528 KDINDRKNPLTTKLEEVKNDLDKNKKELQELDNKTENIKKNNLASLLASELVEGSPCPVC 587 Query: 510 GSTSHPAVEAY-QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQ 568 GS H + E ++ L+ ++ L + L ++ I+K+ + E + Sbjct: 588 GSIHHTDIAKKIDNNEILKHEENRKKLQQIIEDLNNKMTQLSIEVAGISKEEEHSREELK 647 Query: 569 ------------SLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS 616 L +++++ +++ + ++ +DI+ L + E + ++ L Sbjct: 648 SVLESLENVDITELNKEKESKEAKFKELKEKIDKYNSEKNDIESTLQIEREKKSKIDLAE 707 Query: 617 QR------------HELQGQIAAHNQQIIQYQQQIEQRQQ-----LLLTTLTGYALTLPQ 659 + EL+G++ N+ + E ++ + + Sbjct: 708 SKLSENVKNEILLIKELKGELEKENKNFHGLSNEYESLKEYFCAEEISLKAKEVLKIEKE 767 Query: 660 EDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET------------------- 700 + ++ + +++ + L ++ ++ ++ Sbjct: 768 SERLKNKEKELRSIVENYDVNKQTLADEDKKLIEVLSQIQQSGIEKSNVIKENKEDIKRL 827 Query: 701 ------------LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 + + + T + + + E + +++ TL++ + ++L+ Sbjct: 828 CGDKNPKEYLPKIKKEIKEISDRNTKLKKQLDEEKELKEKISNEKLTLEKAANIFDETLK 887 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + Q++ + +L+ + F+D L+DE TL +E +++ ++ ++ + + E L Sbjct: 888 QQQSKLEMSLKDNEFNDVLEVKKYLLDEVTLLSMENEINIFDDEVKEVKSNIKRIEEKLQ 947 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 E++ ++ + + +N +++ + ++ + L + Sbjct: 948 G--------NRIEKEAWEELTSYKSEIDKHISDNIKKIATLQKIIDDFKEDLKNLMELRK 999 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRK 927 + Q+ ++ L L+ EG+KF +F L + A+++L + RY L+ Sbjct: 1000 REKQLDHKLSLIRDLMKLV---EGNKFVEFVAMNQLKYIAREASKRLKDITRDRYALEID 1056 Query: 928 ASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEG 985 + + D + +RD TLSGGE+FL SL+LAL+LS V ++ FLDEG Sbjct: 1057 SEGN--FAIRDDFNGGQIRDASTLSGGETFLTSLSLALSLSSQVQLKGSAPLEFFFLDEG 1114 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI-NGLGYSKLEST 1044 FGTLD++ LD + +L+ L++S ++G+ISHVE +K R+PV++ V G G SK+ Sbjct: 1115 FGTLDTDLLDIVMSSLEKLHSSRLSVGIISHVEELKNRVPVKLIVSPAKPGEGGSKVTLE 1174 Query: 1045 FA 1046 ++ Sbjct: 1175 YS 1176 >UniRef50_C6RPI9 ATP-dependent dsDNA exonuclease n=2 Tax=Acinetobacter radioresistens RepID=C6RPI9_ACIRA Length = 1200 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 300/1200 (25%), Positives = 489/1200 (40%), Gaps = 159/1200 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI+ L+L+NL SL GE +I+F +P GL AITG TGAGK+TLLDA+CLAL+++ PR Sbjct: 1 MKIVRLKLQNLASLAGEQEINFEADPLQHAGLIAITGATGAGKSTLLDAMCLALFNKIPR 60 Query: 61 LSNVSQSQND-------------LMTRDTAECLAEVEFEVKG-EAYRAFWSQNRARNQPD 106 L D ++ R TA +E+EF + + Y A W RAR + Sbjct: 61 LKTHEGKLKDVSGQDVQIDSTLNILRRGTAHAYSELEFIAQNQKRYIARWELKRARGHAE 120 Query: 107 GNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKP 166 G LQ + L DG +L DK K+ + L GL + +FTR++LL+Q + AFL AK Sbjct: 121 GKLQAVQRALVCVTDGNMLTDKAKECDKQVLELIGLSFEQFTRAVLLAQSEVGAFLKAKD 180 Query: 167 KERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQ 226 ERA+LLE LT + I+ + FE+ K R + EKL V LL+ EQ+ L + Sbjct: 181 NERADLLEYLTNSNIFSLVGKAAFERTKMVRVQREKLNELIGHVELLSTEQMAQLEDQYK 240 Query: 227 VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA---- 282 + +QL +Q + L W D L + +Q+ Q L +K Q Sbjct: 241 ARQQQVQQLEQHRQILRNELQWHKSHDLLYTQIQAKQEFYQVQLDANQKLGEQRQRLQQL 300 Query: 283 ----------LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRH 332 L + + L+ ++I++H + +Q + Q+ + + Sbjct: 301 EQFASIRPILLQQKRCEQQLQNLEKQISQHQQLFQQVCEQYQAAQKSCQAARTAVENEKL 360 Query: 333 HAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQF-------------------- 372 + + L Q +Q L+ ++ Q N+ A+ Sbjct: 361 RQNQLAPYLNQAKQFLDQRKLIESQYTQVRNKLKEKTAEQQQQLEQLQQAQQQYQQLENI 420 Query: 373 ------------------SQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 S+ + +HL+ + Q A + I L + D + Sbjct: 421 QQQLQQQLAQSQQLCGFDSEPQASLQHLKAYIAQAQQASELYTQDQIIHLQIQQDSIEQQ 480 Query: 415 LAQHAE----QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ------EQTQRNAALN 464 L + + L Q L L+ Q Q +R+ Q + + + E + ++ Sbjct: 481 LHKLVQHAGDANQLEQKLRDLYQQREQQLERIYQFEQLQHQLERWQIHYIEHQSLDQNIH 540 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKT----------------LEAQRAQLQAGQPCPL 508 +++ +E + + ++ E + + + +E RA LQ +PC + Sbjct: 541 QLKSEIQELHNAMLEQQSAYEHDKKERELLQKQLQQQRLLFSENIEQLRAALQPDEPCMV 600 Query: 509 CGSTSHPAVEAYQALEPGVN---QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDEN 565 CGS HP E LE + + + + ++ + R Q L + Sbjct: 601 CGSQQHPYREQQHLLEKSLLAIQEQQEKNYLQKEQEAQNQWLAARQQYLKQETVLSHLQQ 660 Query: 566 EAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHER-QLRLLSQRHELQGQ 624 + Q + Q L QQ Q + + L + L E ++ QL++ Q + Sbjct: 661 QQQYSLEQIQQLQQQLQHKYSFSGLELLWEQPPEQLLLKLGELQQVQLKVREQLDFNITE 720 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE---------ESWLATRQQEAQ 675 Q + +Q+E+ + + L P + ++ L Q Q Sbjct: 721 TQKTQSQYNELVRQLEKLRAQCIRAQQLQQLATPILKKLPSSQHSDWHDNSLQEAQHIYQ 780 Query: 676 SWQQRQNELTALQN------------------------RIQQLTPILETLPQSD-----E 706 +Q R +L L +I QL LE L Q + Sbjct: 781 VFQNRLLQLEQLNTHKGSVEQLNLKLQPQQLQYQYLNTQIVQLEQELEQLKQQGLDNVTQ 840 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ----------------KA 750 + V + + Q L Q L+Q + Q + +A Sbjct: 841 VKELTLKVAGQTYEQAQHWLDDLTQQLSILEQSCLEKQQYFEGLQQNYQQQQSKISQFQA 900 Query: 751 QAQFDTALQASVFDDQQAFLAAL------MDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 Q +++ Q +L + E + Q +Q + + +++ Sbjct: 901 TRQHVQQEYTNIYAQVQHWLNDHPDYSPELIEFLVLQDATEEQRIRQLIQANDRGLSEAK 960 Query: 805 ETLAQHQQHRPDDGLALTV-TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ 863 L Q+ EQ+Q L +L + ++R +L+ N +Q Sbjct: 961 TALNTLQEQFEQHLATKPAHEFEQLQNLLENLEIQLEHTYQERDQLRTKLEIQQHNLHKQ 1020 Query: 864 QTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL 923 Q +QI Q+ Q+ W ++ LIGS +G +F+K AQ LD LV ANQQL L RY Sbjct: 1021 QQFQKQIVQVQQEEYRWSRISELIGSADGARFKKLAQEHHLDILVEYANQQLQPLAPRYQ 1080 Query: 924 LQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLD 983 LQR L + ++D VR +LSGGE+FLVSLALALA++++ S +I+SLF+D Sbjct: 1081 LQRIEDS-LGLAIIDHHMNGEVRPVLSLSGGETFLVSLALALAIANMASGSMKIESLFID 1139 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 EGFGTLD +L +DALD L G+ + +ISHV+ M ERIP+QI+V K G G S+++ Sbjct: 1140 EGFGTLDPASLHVVMDALDRLQGQGRKVTLISHVQEMHERIPIQIQV-KAVGSGASRIQI 1198 >UniRef50_C9RXI5 SMC domain protein n=4 Tax=Geobacillus RepID=C9RXI5_GEOSY Length = 1114 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 217/1124 (19%), Positives = 433/1124 (38%), Gaps = 101/1124 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK +SL + L+S + + IDFT G+F I GPTG+GK+T+LDA+ LAL+ R Sbjct: 1 MKPISLTIAGLHSFREKQTIDFT--ALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG--NLQVPRVELAR 118 +N +Q+ ++ E FE++ A ++ R+ + D + Sbjct: 59 AANRTQA---IINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEH 115 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 ++ +LADK+ + + L GL FTR+++L QG+FA FL+ K ER ++L+ L Sbjct: 116 RSEPVVLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFH 175 Query: 179 TEIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 E YG Q++ + ++ +AR E EK++A+ +G+ + ++ A ++ L + Sbjct: 176 LERYGDQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALEQAEADVRELAGLFAKRKK 235 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 ++ + + ++ QQE +Q L E + A+ A + P+WE Sbjct: 236 ELEEVEADVERTKQRWAWQQEKEAVEQELAALRQHESAIRELEVKKERAEQAERIWPYWE 295 Query: 298 R-------IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNT 350 + AE + +++EE + R A++ EL Q + L Sbjct: 296 QCEQACRLRAEAFRRYEGLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQ 355 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 Q + E A + + + + + ++ + ++ Sbjct: 356 AAQLEQQMEVLGQELAALSEERKRLIAQEKAAARRFEEASVWYERGAKRQRELKEELKQH 415 Query: 411 VATALAQHAEQRPLR--QHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA------- 461 + +R R QH+ I +L Q + + +E+ +R Sbjct: 416 EEALDGKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGS 475 Query: 462 ------------------ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAG 503 + ++ + + + E+ + A +L+ G Sbjct: 476 RLQELFRRVERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLRPG 535 Query: 504 QPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRD 563 +PCP+CGS HP A S L A ++ + + + QL+ + + Sbjct: 536 EPCPVCGSREHPHPAAAPHDVQLERLSELEAERQRYEQDWQMIISFKAQLEQLAELAAGH 595 Query: 564 E-----NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQR 618 E E++S+ + + + + + W +A+ + Sbjct: 596 EAPPLFAESRSVEEVVDLTVEVRALAQDVIELKEAVYRVLAQWNEAESARREAEKACQWI 655 Query: 619 HELQGQIAAHNQQIIQYQQQIEQRQQL------LLTTLTGYALTLPQEDEEESWLATRQQ 672 + Q++ + ++Q+EQ+ + L T Y +E+ + Sbjct: 656 AADIEALQVEKQRLEEERRQLEQQWRQMYPFLSLETIDAVYEQLCERENVRRDVQKRLED 715 Query: 673 EAQSWQQRQNELTALQNRIQQLTPI----------------------------------L 698 +++Q +L L Sbjct: 716 SVLFLEEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGSGPAAVHL 775 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 + E E W++ + L S+ + +Q + ++A A++ AL Sbjct: 776 QKAEAEWRQLQNGEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEALARWRGAL 835 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 ++F D + A ++ + ++ + Q QA+ + Q A + Sbjct: 836 LDTMFADAEQVKQAKAEKAQRDEWDEAIRRYWRQIEQAEHRLAQLAAAIGG--------A 887 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 E +Q+ A+ +++ T G + ++++ + L ++ ++++ +E Sbjct: 888 AVSAEQWETMQRVYAELKEQVEAMTQQLGAAQAKVEELKKKHSRFVELEEKQTELSRHIE 947 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVD 938 + L +L+ G+ F +F L+ + +A+++L RL R+ + + D Sbjct: 948 RYKQLQALL---RGNSFVEFMAEEQLEQVTAMASERLQRLT-RHRYSLELDSQGGFLIRD 1003 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDT 996 R TLSGGE+FL SL+LALALS + + + FLDEGFGTLD+E L+T Sbjct: 1004 DANGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLET 1063 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 + AL+ L+ +GVISHV+ ++ R+P ++ V+ G Sbjct: 1064 VISALEKLHTERLAVGVISHVQEIRHRLPRRLIVEPAEPSGRGT 1107 >UniRef50_C2KSA6 Exonuclease sbcc n=2 Tax=Mobiluncus mulieris RepID=C2KSA6_9ACTO Length = 1064 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 185/1116 (16%), Positives = 359/1116 (32%), Gaps = 148/1116 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L ++ + S +DF S GLF I G TGAGK+T+LDA+ ALY P Sbjct: 1 MRFHRLTMEGVGSFAHREVVDFD--ALGSQGLFLIHGDTGAGKSTILDALFCALYGSVPG 58 Query: 61 LS-NVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR--ARNQPDGNLQVPRVELA 117 S N + + ++F V + YR + + N +E++ Sbjct: 59 GSENNERRMVSWYLPPKTKPRLTLDFSVGNKFYRLTRTLWSYNELGEKLSNYHAATLEVS 118 Query: 118 RCAD---GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D V + + GL+ F ++++L QG+ FL A ER +L+ Sbjct: 119 VKPDFCEIDETISGVNAVADRVVRVLGLESKHFEQTVMLPQGKAQEFLTANGTERYGVLK 178 Query: 175 ELTGTEIYGQISAMVFEQHKS--------ARTELEKLQAQASGV---------------- 210 L +EIY + + K +LE+L SG+ Sbjct: 179 SLFKSEIYSDLEEAAKARQKQGADESKQYNAAQLERLSTLVSGLVNNPVLEGCGIDLDSI 238 Query: 211 -------------------TLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTR 251 L + L + + ++ + ++ Q+ + Sbjct: 239 QEALHPKQDGKKGWQPRVFDTLYSQVKPQLDQVKEFIANQSQHTRQQLEEAQKLADKAAD 298 Query: 252 QDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQ 311 + ++ QA + + + + ++ + + + L + Sbjct: 299 DFSGAKATFQKIQAAHALQDQLQVLEARTEEIANLREENAQAARAATVITAADNLQSPQL 358 Query: 312 QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR------------FR 359 Q + L S + S + A+ WL F+ Sbjct: 359 QASQKVAELSSLVQQILSKDPVLSNVQAQGLVLVADTKAWLSADSTMDFQRSDSWKSWFK 418 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + + + Q + +L L L + + AQ A Sbjct: 419 RARELVQSQGNRLQTVAGELTQCHQQAEINQGYSVQLGELTQEQAKLLSQQDNLRKAQDA 478 Query: 420 EQRPLRQHLVALHGQI-VPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 + L Q ++ + +QK+ + + + ++ L+++ K+ + A Sbjct: 479 ARAKLEQAQQLAAARVGLAEQKQESDKALEQARDLERLQKKTQKLSQLVATNKQAVKSQA 538 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 + L G+PCP+CGS +HP + Sbjct: 539 RLVKQALDAWIAADAPRLAETLVLGEPCPVCGSCAHPHPATSRGTVAD------------ 586 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 E + +L+ + +LQ E + +L + Q L + + Sbjct: 587 ----YAEFESGSARLEELQAKLQESEKQLSTLNGEIQNLEKILAGQS------------- 629 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 + + Q Q QQ +E+ Q + + L Sbjct: 630 ----------------RQDLEKTNRDLNTRLQAATQAQQDLEKTQIEVQSLEKQLQDVLA 673 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 E E LA + L + ++QL ++ E + Sbjct: 674 TTLELEKSLAA----------TRANLETGEVALRQLQAAIKADLGEKPGEVSVEDYAAKL 723 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQT 778 R + L + Q+ + A + Q Q AL+ + +D A E+ Sbjct: 724 LRHNQQSVQTLE-HIDAIYQEWLTARERWLTRQEQLQQALRENGYDTVTAARDDFKPEKI 782 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 L E ++ + + L + + ++Q QK Sbjct: 783 LESDCATVSQWETDMTSTKSKLEVLRDLLNKKI-----------PDMHVLEQAQLAAKQK 831 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE--GDKFR 896 L + + + ++ ++ ++ + ++Q+ L + + G Sbjct: 832 LSDLQSLEKDLALVSRKFEESLAGIAAKEAAWVESSKQIATLNELVAALSGNNPKGPSLS 891 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLL----------QRKASEALEVEVVDTWQADAVR 946 L ++ +AN + + YL + ++ E L + + + + Sbjct: 892 SAYLSTRLKQVIEIANDTVKDISNGYLEMSFTSHSLDDRSRSKEGLGINIYNAAEDSTTS 951 Query: 947 DTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 +LSGGE F SLA+ALALS +V +D++F+DEGFG+LD T D + L Sbjct: 952 PL-SLSGGEKFYCSLAIALALSAVVQAERGGVELDNIFIDEGFGSLDDTTRDIVISTLKR 1010 Query: 1004 L-NASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L S +++G+ISHV +K IP+Q++VK Sbjct: 1011 LYQDSKRSVGIISHVNELKVDIPLQLEVKNYRSGSG 1046 >UniRef50_A3XLA0 ATP/GTP-binding site motif A (P-loop):ABC transporter n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLA0_9FLAO Length = 1007 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 275/1070 (25%), Positives = 465/1070 (43%), Gaps = 91/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL + KN+NSL+GE++IDFT+EPF N LFAITGPTG+GKTT+LD I LAL++ PR Sbjct: 1 MKILKIAFKNINSLRGEYEIDFTQEPFLQNSLFAITGPTGSGKTTILDVISLALFNHVPR 60 Query: 61 LSNVSQ----SQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL 116 L +S + ++TR+ + A++ ++ + + W + RN GNL+ +EL Sbjct: 61 LGKMSTNEVLKKGAILTRNQEDANAQITYQCNQGIFTSRWEISTNRN---GNLRDYHMEL 117 Query: 117 ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 +IL K D L GL+Y +F +S++L+QG+FA FL KER LLE++ Sbjct: 118 INTVSNEILDLKKSDVPGKNEELIGLNYDQFIKSVVLAQGEFAKFLQVPKKERGALLEKI 177 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQAS--GVTLLTPEQVQSLTASLQVLTDEEKQ 234 TGT+IY +I VF ++K E++ +A+ LL + + + L + +K+ Sbjct: 178 TGTDIYRRIGIEVFLRNKERAKEIDAKRAKIETFREQLLEEDSFAAKQKEAETLAERQKE 237 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQL-AALSLAQPARNLR 293 L + +Q + + + + E + Q+ L + ++ +E + + AL + + Sbjct: 238 LKQSIEQFTKEIELKKKLQVEEGELQKTQKELSEVVSLQENFEKEKGDALKHHEAIQLFA 297 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS----------AELQQ 343 + +I L++ R + ++Q ++++ Sbjct: 298 EELNHWQSLQEKQKEKQTEITRATEALEAAKTRRERLTQQLSEQFKLTVTPTDFPEKMER 357 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + + + E + R +++ R L+ + T ++K + Sbjct: 358 YKAEVRALIDERNALRTAFETSKNPLQTAAREFDLRLDLKDLKGFETALQEKFTKTKSAY 417 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVP------QQKRLAQLQVAIQNVTQEQT 457 L + ++ L + + + + + ++Q Sbjct: 418 ADLENRFDLKNASVAERLAAIQSKLKNIRAAEKAHTALSTLETQRKERSKEHVALQKQQA 477 Query: 458 QRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + +++Q+ + K Q + E K LE R LQ +PCPLCGS HP Sbjct: 478 PLPEEIKQLKQQIELKEAQHTAKQKTLEVAQLQKQLEDYRKDLQNNEPCPLCGSLDHPFA 537 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 E G+ + L LE+E+K L +E AT L +T+Q Q+ E + L ++ A Sbjct: 538 AHIPQEENGLKAAVL-QLEHELKTLNKELATKESSLQQLTQQTQQLEQRIKVLDEELSAQ 596 Query: 578 TQQWQAVTASLNITL--QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 + A +L T ++++ L+ Q++ L Q + GQI + Sbjct: 597 QTTFDAQFKNLMQTKGNATFNELELQLEQQEQELNSAEKLQQNIKTLGQIEQQTSDLKAL 656 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 + ++ + +G + + QL Sbjct: 657 LAKGKKIAASISAVYSGK--------------------------------DFEQDVSQLE 684 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 Q+ + E R + ++ +L Sbjct: 685 TSWNRNEQTAKQQEQLLNAAKEAERDLAKKLESLTVS---------------------LL 723 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 L+ +D + L ++ T + + ++ + +TL + E + + Sbjct: 724 DQLKEKGYDAIEDALQMRLNAATAQTWKHELEQIKQDALRLKTLRNKLIEEIQILKDTVG 783 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 + +E +Q+E + + ++N S + +QL DN +Q + L +QI Q + Sbjct: 784 E------TPLEALQEEHQKQTEAHQQNEHSASVLSRQLLNHKDNLEQIRKLQKQIDQELE 837 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL-QRKASEALEV 934 + W L LIG +GDKF FAQ LTL L+ LAN++L RL RY + Q E + Sbjct: 838 SSKHWQVLFDLIGDSKGDKFNNFAQDLTLQQLLQLANKRLMRLTDRYQIDQPAEDEDDSL 897 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETL 994 +D R +TLSGGE+F++SLALALALSDL S I+SLF+DEGFGTLD ETL Sbjct: 898 VAIDEHMGGQRRSIKTLSGGETFILSLALALALSDLASRNIEINSLFIDEGFGTLDPETL 957 Query: 995 DTALDALDALN-ASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 D LD L+ L S K IGVISHV+++KERI QI++ NG GYS L+ Sbjct: 958 DQTLDTLEVLQAESSKMIGVISHVDSLKERIATQIQLT-QNGQGYSSLKV 1006 >UniRef50_Q830T3 Exonuclease SbcC n=23 Tax=Enterococcus faecalis RepID=Q830T3_ENTFA Length = 1045 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 220/1075 (20%), Positives = 423/1075 (39%), Gaps = 59/1075 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK LSL LKN E IDFT+ F + LF I+G TG+GKTT+ D + AL+ E+ Sbjct: 1 MKPLSLTLKNFGPYINET-IDFTK--FEDSSLFLISGKTGSGKTTIFDGMSYALFGESSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 + + + + F+ Y + + G + Sbjct: 58 KLRLGKEMRSTFADPSEATEITLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLI 117 Query: 120 -----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 K ++ EL L L+ +F + +LL QG+F FL AK E+ ++L Sbjct: 118 VKDAQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT-----PEQVQSLTASLQVLT 229 L GTE+Y S + E+ K A E+++ Q + T PE +L LQ+L Sbjct: 178 NLFGTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLE 237 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 ++++ E++ + L + + +++ + Q ++E+ + A + + Sbjct: 238 SQQQEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETV 297 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + S + +++ E + Q S + + L Q ++ Sbjct: 298 IERLKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMS 357 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL--- 406 ++ + + Q Q + +Q + + + + Sbjct: 358 ELEEQQPLIAEKQERLQTIQRQLPQYQEYEQLAQQQIAEQANYQAIQKEYESCQQEKITL 417 Query: 407 --TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + Q ++ +R + Q A Q ++Q Q + + Sbjct: 418 ADKVATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQGELHELTQ 477 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 ++K+ + A ++T Q A + ++ L+ G+PCP+CGS HP + +Q Sbjct: 478 RFAVEQQQKSAEEAKLQTKKSQWASL-QIQRLSLLLEEGEPCPVCGSLEHPKQQTHQ--- 533 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 V+ + E E+ ++ + L A+ + Q+ E++ Q +Q A Sbjct: 534 -EVSLEEIDQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQ 592 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 A L + L L Q E E QL Q QIA +I + + + ++ Sbjct: 593 FADLQLPLTGLTFSQVTPAEIAEVESQLAKEKQ------QIAQKLTEISVEKDHLAELEE 646 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 + + + Q + + L + Q ++L +++T L + Sbjct: 647 QVAENSQRFEVLRQQVETMQQSLERITIQQQMI---ASQLLDATVTYEEMTKQQTLLQEE 703 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 ++ V + ++ + L S L+++ Q++ + ++Q + L Sbjct: 704 LSAFERQKENVTTQGETLKKEEMILESTLTHLEKEQQTLQQTVAQLESQLNAVLTEQG-- 761 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 + E LT+ + LE+Q+ Q + + Q + Sbjct: 762 ---------VTEDQLTEWLKEVPTLESQQEQIALFEQEQTQLTIQLAEIEKKLSSDTFPE 812 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 + I E+ Q Q++ E ++ ++++ + Q+ I ++V L Sbjct: 813 LSLITTEIEQITQQIEEQEKKYYQLHEKMQNNQQLVQEINAQRTTIEDKFEEVAALQQLA 872 Query: 885 SLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQR-------KASEALEV 934 + K F ++ L+ ++ +ANQ+L RL RY + + LE+ Sbjct: 873 DTVNGNNPKKISFERYMLQTYLERVLTVANQRLDRLTNSRYQFELNHEAGSYRNQTGLEI 932 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 + D + VR TLSGGESF+ +LALAL+L++++ + ID+LF+DEGFG+LD Sbjct: 933 NIYD-DNSGTVRSAHTLSGGESFIAALALALSLAEVIQEQAGGVLIDALFIDEGFGSLDE 991 Query: 992 ETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 E L+ A++AL+ + G+ IG+ISH+ +K RIP Q+++ K NG G S + A Sbjct: 992 EALEMAMEALETIENEGRMIGIISHIGELKARIPQQLQI-KSNGNGQSTVHYQLA 1045 >UniRef50_B6FJZ8 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJZ8_9CLOT Length = 1026 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 203/1056 (19%), Positives = 422/1056 (39%), Gaps = 40/1056 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L++K LNS E IDF + G F I GPTG+GK+T+LD + LALY Sbjct: 1 MRPIKLKIKGLNSFVEEQTIDFEK--LTKQGFFGIFGPTGSGKSTILDGMILALYG---- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +S+ N+ + ++ EF++ + + + + G L Sbjct: 55 MKAMSRGTNEFVNKNCKSAQVSYEFQITSAQVKRYRVEREFKAGEKGTKSGKCRLLDVTD 114 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +L + V + GL F R+++L QG+F+ FL K+R E+LE L E Sbjct: 115 GETVLEESVTGVDRACVEIIGLTADDFMRTVVLPQGKFSEFLKVSGKDRREILERLFRLE 174 Query: 181 IYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 YG ++ + K ++E +L QA + E+++ E + L A Sbjct: 175 EYGVRLEERIASAIKKEQSEHTRLCGQAEVYGDCSEEELRDARERKDNYQTEIELLEKAL 234 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 ++ ++ LQ+E +Q + +E+ + + +L+L+ A ++ P + Sbjct: 235 RERRKEAEIYKEIWNLQEEQQLLKQKEKMLFEKEQIIEEKKRSLTLSDKAGHVMPILRSV 294 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 E + Q++E+ R + + H +K E + ++ L + ++ Sbjct: 295 TELEDKETELLQKLEQETARYEKRKEDVKVRKKHFSKLETEKESKESGLLSSIERAKEAL 354 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQ--KLNALAAITLTLTADEVATALAQ 417 + E + + + + R +Q L Q +L + +E+ + Sbjct: 355 KDYRELPQLQKEQNCSEALWNESRTQEQSLKEKVQKTQLKKESQTEELRKTEEMLSRRMI 414 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 +E R + + ++ + + + + + + ++++ +QL Sbjct: 415 TSEYREALEQFTLRYNELTGILRERKEKEQKTDQKKVQLQVQKQEIVALKEKMTVLEKQL 474 Query: 478 A---DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 + + ++ + R +L+ G+PCP+CGS E E G L Sbjct: 475 ELWKEEEAEFNKDMEQTQILNLRKKLKRGEPCPVCGSRHFVYEENDGGEEKGQESVDLEK 534 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 LE LR Q++ + E E Q + A ++++ + + Sbjct: 535 LET-----------LRKQIENRESVYKAAEQEYQVKQSLLLAAQEEYKELEEKTAAIAKE 583 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 +++ + L + L ++R ++ + +++ + +I ++Q + L Sbjct: 584 MEEKKDSLQEELLAYGIQSLKAERERVRN-LDQERERLEIERNRIYRQQTEVEQILGRAQ 642 Query: 655 LTLPQEDEEESWLATRQQ-EAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 ++++ L + Q+Q ++ A L+TL S Sbjct: 643 EEWKNKEQQTRQLEILLIPLKEKVTQKQEQIRAKIGTETNPEVYLQTLEDSLSNLRKIYQ 702 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 + Q LQ ++L+ A+ + L+ F +++ AL Sbjct: 703 EAKRKKEEAENLLKQSEEVWQILQGTKTGNEEALKNARTYLEEELKQQGFLNREEVRKAL 762 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 + ++ + + + Q +Q Q + + LA + V E+ Sbjct: 763 LSKECQERYREEIEEYVRQLQQTQAQIENVEKRLAGRK--------IEKVIYEEAVTNCE 814 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGD 893 ++ RE RQ++K+ ++ +QQ + + I+++ ++ L S+ G Sbjct: 815 MLDREKREKEEILIATRQEIKRMEEHLKQQSEIRKVISEIEHRLAILEDLRSVT---RGK 871 Query: 894 KFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSG 953 +F +F L + A+++L + + + +E E + D R T TLSG Sbjct: 872 RFVEFLATERLRYISKSASKRLYEITNGNY-ELEINEDGEFIIRDNKNGGVRRQTATLSG 930 Query: 954 GESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 GE+F+ SLALALALS + ++ FLDEGFG+LD LD +++L+ ++ + Sbjct: 931 GETFVTSLALALALSAEIQLKGTAPLELFFLDEGFGSLDDMLLDIVMESLEKIHNDHLKV 990 Query: 1012 GVISHVEAMKERIPVQIKVKKIN-GLGYSKLESTFA 1046 G+ISHVE++K R+P+++ V G+ S++ ++ Sbjct: 991 GIISHVESVKARVPIRLMVTPAETGVSGSRVNIEYS 1026 >UniRef50_B5Y7X7 Probable DNA double-strand break repair Rad50 ATPase, putative n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7X7_COPPD Length = 972 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 168/1036 (16%), Positives = 369/1036 (35%), Gaps = 78/1036 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + N LK F G+F ITGP G+GK+++L+A+ ALY +T R Sbjct: 1 MKPKKLEVTNFLGLKN------LSLEFPEQGVFVITGPNGSGKSSILEAMYFALYGKTMR 54 Query: 61 LSNVSQSQNDLMT------RDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRV 114 L ++ + + A + F +G+ Y R ++ D + Sbjct: 55 LPGDVKNTAVINRNAQHSSDNPARAVVSFTFVQQGKEYLVRRELVRGVHKKDDVSHNAWL 114 Query: 115 ELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 G + V + GL F ++ L QG+ + AKP +R ++ + Sbjct: 115 YDLSGHAGLVPETGVVKVNNKVEDILGLTPEVFAATVFLGQGKITELVEAKPDKRRKIFD 174 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 + T+ ++ +V + +T+++ L + + + L LQ + + KQ Sbjct: 175 AILETDHLVKMQELVRGDLRELQTKVKALLERKEILEQGPS--AKDLEKELQDVEENMKQ 232 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 +I Q +Q+ L ++ + + + +E EK + + + + LR Sbjct: 233 VIERVQVFEQAAKELEEVQRIKGDMENTEADIAALRSEIEKLKEAAERDTRIRLIKELRS 292 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 + + + L + + +++ L + ++ + +L + ++ +E Sbjct: 293 KYAELEQWQIQLEELTKNKDKLGKDLSNWSERINELKLRVVQIEGQLNSLEDDVH-LSKE 351 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 + Q + R+ + + +L + + L L ++ + Sbjct: 352 KEILAQSLEDLKALRSYLEEAWNAIVQC------------RLTSEEVLQLVLEERKLKSE 399 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 + + + L ++ + +++ Q V +E + +++R + Sbjct: 400 INKLEHFVEVVSSSDGLINSYFSAKQNMEKVEKEKQEVEKELFILEQSQATLKERISILS 459 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 Q +++ + L G CP+CGS E + + Sbjct: 460 QDYPNLEQDFL-------VSRLAEPLHVGDTCPVCGSEITKLREIPLPEDVLM------- 505 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP 594 E +L E L Q I ++ + + E LR+ + + +++ Sbjct: 506 ---EFSQLEMERYHLEQQQRIINERKAKLDKEEIELREVIKECESRLDLAVLEKMGSVKS 562 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 D Q WL AQ E + NQ++ Q ++QI+ ++ L +T Sbjct: 563 FDAFQMWLSAQRE----------------ALLERNQRVSQLEEQIQSKRDRLKSTYCSTL 606 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 L + E + L + Q + ++ R ++L + + + + Sbjct: 607 KRLCNQKEIKEALLK-GSVEEQLSQADQGIAEMERRKKELEAFSQQVREQRQDLMLALAE 665 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 R+ E+ + + Q + + + ++ L + + L Sbjct: 666 TNVELRKTQEREEDIRNTLQETIHRMKQLSGQVSTLLSELKEELSRAHISYEDYELLKSE 725 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 E +Q R + + + L + ++ V E++ +L Q Sbjct: 726 QESGAA----------DQLRALKGKLDVLEKRLEEQRKKYLSLLENRDVASEELPVQLEQ 775 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 + +G ++ ++Q + + Q+ + +++ L+ + + D+ Sbjct: 776 AKSEYEVLLGERGRLQASIEQALQKEAELNQVEVQLDALEKELNILSRLSDDL---KADR 832 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 F F +G ++ +V A+ L + G S++ +VV + D +LSGG Sbjct: 833 FPDFYRGEMMNEIVSSASSLLWEMSGGQFNLTFDSDSFRFDVV--FDDGLSSDISSLSGG 890 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 E LV+L+LA A+S + ++S+FLDEG LD E L L +G++ Sbjct: 891 EKVLVALSLAFAISQHFAG--SLESIFLDEGLAWLDKENNTKLAQYLQNLEDGAILVGIV 948 Query: 1015 SHVEAMKERIPVQIKV 1030 +H E ++ V Sbjct: 949 THSEEFAINFQRRLYV 964 >UniRef50_O06714 Nuclease sbcCD subunit C n=3 Tax=Bacillus RepID=SBCC_BACSU Length = 1130 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 218/1147 (19%), Positives = 416/1147 (36%), Gaps = 125/1147 (10%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK ++L +K L+S + E IDF + G+F I GPTG+GK+++LDA+ LALY + R Sbjct: 1 MKPIALSIKGLHSFREEQTIDFEG--LSGAGVFGIFGPTGSGKSSILDAMTLALYGKVER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +N + ++ F ++ ++ + + + ++ Sbjct: 59 AANNTHG---ILNHAEDTLSVSFTFALQTNHQISYKVERVFKRTDEMKVKTALCRFIEIK 115 Query: 121 DG-KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 D +LADK + + L GL FTR+++L QG+FA FL+ K ER +L+ L Sbjct: 116 DEHTVLADKASEVNKRVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNL 175 Query: 180 EIYG-QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E YG ++ + Q + A ++ A+ SG+ + E V+ L+ + + Sbjct: 176 EQYGDRLVKKLRRQAQEANARKNEMLAEQSGLGEASSEAVEQAEKVLEQAEARLEAMRKN 235 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + Q ++ +Q+E S ++ ++ E+ L A+ A L+P+ +R Sbjct: 236 RDQAKERFTEHQEIWNVQKEKSTYEEEEKRLAEEQPHIDSMQKRLLEAETAAALKPYADR 295 Query: 299 IAEHSAALAHIRQQIEEVNTRL-------QSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 AE ++ L Q + R H +++ EL +Q+ L+ Sbjct: 296 YAEAIQHEEQAEKEQTLAQKDLADRTAFFQQKHEEYEAWRQHKSEKEPELLAKQEQLSRL 355 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDRE----HLRQWQQQLTHAEQKLNALAAITLTLT 407 + + + E +A Q+ + L +LT + + L +L Sbjct: 356 QEIEIKLSEAKQEEERKKADLRQKEEALQSVMNELETVTDRLTRGQNRQTELKQQLKSLQ 415 Query: 408 ADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 Q A + LR + QI ++KR +L + +Q + +E+ Sbjct: 416 VTSDERKSCQQAAEMALR--IRQTEEQIKKEKKRSEELNLVLQKMNEEKNTLVQKTEAEE 473 Query: 468 QRY-------------------------KEKTQQLADVKTICEQEARIKTLEAQRAQLQA 502 +E + + E+ + +L A Sbjct: 474 NNIIQAYEAVQTVYHLVCETERSLTRMTEEARKSQHTLHLQREKARVALLTKELAQKLTA 533 Query: 503 GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQR 562 G+PCP+CGST H + E S L L E A L ++ + L+ Sbjct: 534 GKPCPVCGSTDHDPSASV--HETYEADSHLEEDIKRTDVLLTEAAALSQEILSAKIMLEE 591 Query: 563 DENEAQSLRQDEQALTQQWQAVTASLNIT---------------------------LQPL 595 Q + Q AS Q + Sbjct: 592 QSARFIEQCPFLQTIQAQNLEAAASFEHQPVYEAFETAKFEWKRIKQDILSVKTRMAQMI 651 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQ--------------------QIIQY 635 Q L ++ ++ + + I + Q + ++ Sbjct: 652 GAYQESLKKAEQLNEKIGFEKREADRIESIISELQSSMDSSLNMFKEAFQNQSVDEAEKW 711 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ-- 693 QQ IE++ + ++ E E+ ++ ++ + EL RI+ Sbjct: 712 QQAIEEKDRAAEECEKRIEKSIAFLAEHEAQKEKLRESGHRLEREKLELHYAAERIKSVI 771 Query: 694 ---------------LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQ 738 + L ++ Q +L +E + E + + S+ + Sbjct: 772 ADYEHELGDYAKGDSIQIKLRSVQQDLKLLKEKEQSLYEELQSAQMKLNQAKSRASASEL 831 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 A L+KA+A + + + + +L+ L +++ ++ +Q Sbjct: 832 TLQEAKGRLEKAKAAWLEHTKNTSITRTEEVEQSLIPADELEKMKTGIDQFMDKLKQNAA 891 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 + + AE LA + L + +G + L D Sbjct: 892 NLKRVAEILAGR--------ALSESEWNETVAALQEAEDAFGAAIEEKGAAAKALAVIRD 943 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRL 918 + ++ + ++ + ++ L ++ +G+ F +F L+++ A+ +L+ L Sbjct: 944 HHKRFNEIEAELKKWQMHIDRLDKLQAVF---KGNTFVEFLAEEQLESVARDASARLSML 1000 Query: 919 HGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTR 976 R + + D R +LSGGE+FL SL+LALALS + + Sbjct: 1001 T-RQRYAIEVDSEGGFVMRDDANGGVRRPVSSLSGGETFLTSLSLALALSAQIQLRGEYP 1059 Query: 977 IDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 + FLDEGFGTLD + LDT + AL+ L + +GVISHV+ ++ R+P ++ V Sbjct: 1060 LQFFFLDEGFGTLDQDLLDTVVTALEKLQSDNLAVGVISHVQELRARLPKKLIVHPAEPS 1119 Query: 1037 GYSKLES 1043 G S Sbjct: 1120 GRGTRVS 1126 >UniRef50_Q0SWG0 Exonuclease SbcC n=9 Tax=Clostridium perfringens RepID=Q0SWG0_CLOPS Length = 1172 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 190/1190 (15%), Positives = 421/1190 (35%), Gaps = 166/1190 (13%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L +K LNS + ++F + GLF I GPTG+GK+T+LD I LALY + R Sbjct: 1 MKPIKLEVKGLNSFIDKQVVEFDK--LTERGLFGIFGPTGSGKSTILDGITLALYGDIAR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKG---EAYRAFWSQNRARNQPDGNLQVPRVELA 117 S+ + + + EF++ G + YR R + ++ Sbjct: 59 KSS------NYINTNCDGVYVSYEFQITGNEVKRYRVDREFKRDNKSGGIRNKSSKIIDI 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +L +K K + GL F R+++L QG+F+ FL + KER +LE L Sbjct: 113 TGGVENVLEEKAKAVTSKCEEIIGLKLDDFMRTVVLPQGKFSEFLKLEGKERRNMLERLF 172 Query: 178 GTEIYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 YG +S+ + + + + ++ L+ Q G ++ E +++ + + K Sbjct: 173 NLRKYGDDLSSKLSLEIRKEKDKMNVLEGQLKGYEGVSEEALKAKEEEINEINLSIKSKE 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA------- 289 + ++ + Q+E ++ + ++ E+ + + ++ A Sbjct: 233 ELLNKIKKEFEEAEKVWNTQKELYDKRIEEESLVSRSEEIKSFKERVEISNKADKVIVFI 292 Query: 290 -------RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 + + + E + L + EE + + + + +L Sbjct: 293 NNLEEILKEINKEDLKFNELNKKLEELTNLREENKLKFEEVSKKKEEKLPDLRLKKEKLL 352 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ------------------ 384 + Q+ + Q + S+ + + + Sbjct: 353 ESQKERDILFQIKADGVKLKEACKKIFEDRSKCDTKLNSIEENEKRLNEELKEKEERKEE 412 Query: 385 -----------------------WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQ 421 +Q + + L LT D+ + + Sbjct: 413 LFVHEEFKNKINSGLFILSSYEGLDKQFNEIKSEEIELKKYIKNLTEDKEKSEKDLKVKI 472 Query: 422 RPLRQHLVALHG--------------------QIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L + L + + + +++ +++ + + Sbjct: 473 ESLSKTRDKLESLLKKTPGDSNSILEKQIKLGEYREKLNKYKEIKNSLEESLKSKNNFEE 532 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP--AVEA 519 L + +++ ++K + + R L G+ CP+CGST H VE Sbjct: 533 KLKAFENQKLLLEKEVRELKEYINKVKVEELAHKLRENLVDGECCPVCGSTHHELNKVEK 592 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL----RQDEQ 575 E + L + E ++K+L E + + L+ K+++ + + + + Sbjct: 593 INLEESNEKTTLLESKEEKLKELILEFSKIEATLEYENKKIEELNISIEEVGEVNEERLK 652 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLR------------LLSQRHELQG 623 +L +++ + + ++++ L+ E + L + + E+ Sbjct: 653 SLEEEFNTLKEKVEEFNLKKENLEKDLEKLKEEKNNLENIFNKAEVILCEKIVREKEIAS 712 Query: 624 QIAAHNQQIIQYQQQIEQRQQLLL------------TTLTGYALTLPQEDEEESWLATRQ 671 +I ++++ ++ + L L + + L Sbjct: 713 KIKEVDKELKLKNSELNSIKNELKIEDIKLENELILKKEKEKNLLEKEIRILRTQLEESN 772 Query: 672 QEAQSWQQRQNEL----------------------------------TALQNRIQQLTPI 697 + +++++ L AL + + Sbjct: 773 KIKDELREKRDALKEDYLSQKSLLDGKVEVYREKERMIKGSLKGLIDEALPIEKIDIKGL 832 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 LE L + + E ++ + ++ + +++ + + + + A Sbjct: 833 LEDLQLEIDYIEKAYLNLSEEKEKLEKAFNNMNQEVAVTKERVNSLNLRKENEEKKVNLA 892 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L+ F ++ + +L+ L + +N + + + + L Sbjct: 893 LEEEGFKTILEVKEGILSKDEKEKLKTLIEEYDNNLIKVRANIELLIKKLNGKSL----- 947 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 ++ QE T ++L+E + + + + ++Q+ ++ A+ ++ Sbjct: 948 ---TEEEWTRVLQEKNNTEKELKEVEELKIRLVTENESIKKKLEEQRDILHIKAKQEHKL 1004 Query: 878 EDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVV 937 L L +G KF +F L + A+++L + + E + + Sbjct: 1005 ALLSDLEKLF---KGKKFVEFIAANQLKYISIEASKKLKDITNGVY-GLEVDENGKFIIR 1060 Query: 938 DTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLD 995 D A RD TLSGGE+FL SLALAL+LS + ++ FLDEGFGTLD LD Sbjct: 1061 DYKNGGAKRDASTLSGGETFLASLALALSLSSQIQLKGTAPLELFFLDEGFGTLDDNLLD 1120 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLEST 1044 +++L+ L+ ++G+ISHVE++K R+PV++ + G+G SK++ Sbjct: 1121 VVMNSLERLHHERLSVGIISHVESIKNRVPVKLILTPAEAGIGGSKVKIE 1170 >UniRef50_A7HCA0 DNA repair exonuclease, SbcC n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HCA0_ANADF Length = 1006 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 205/1063 (19%), Positives = 353/1063 (33%), Gaps = 80/1063 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ LSL L+ K+DF LF I GPTGAGKTTL DA+ ALY + P Sbjct: 1 MRPLSLELQAFGPYARAQKVDFD--ALGGADLFLIHGPTGAGKTTLFDAMTFALYGDVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQ---VPRVELA 117 + + D A F + YRA + R + G P L Sbjct: 59 TRGTGRLRADRAAEGAAP-RVVFRFRLGAAVYRAERTAAWQRPKKRGEGTIEEAPTASLW 117 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 R LA K E L G+ +FTR +LL QG F L A +ER ELL++L Sbjct: 118 REGAEAPLATKPTAVTEKVTELLGMGAEQFTRVVLLPQGDFKRLLCADAREREELLQQLF 177 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGV-----TLLTPEQVQSLTASLQVLTDEE 232 GT +Y + ++ + +L + V ++L A L E Sbjct: 178 GTAVYKDVEELLVRKKNELEAAARRLAERREEVLGGADAGALASGREALEARLAEARGEA 237 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 +L + + +R ++ +A A L+ A A + Sbjct: 238 AARAVDDAAALDALAAGRQLAARLEALARAREESARAQAGAADLARDRERLARASAAERV 297 Query: 293 RPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 R + A + R +A A AK AE ++ + L+ + Sbjct: 298 REKLAAARKAEVARVAREKDEALAAGRRDEAVAALARAGEALAKAEAEAPRRTE-LSARV 356 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 Q +R A ++ + + +A + A Sbjct: 357 QLLERVLPELERLAAADRAVAESRRAA-----ASARAEDERARAALASAEARPAALEAEA 411 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 L A + A + + + I + Q + + Sbjct: 412 ARLRPVAAEEGACAERSARLETGLRAARERDARRAEISKLEQALAGEEREARHAAEAARR 471 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 T + + +L G PC +CGS HPA + P + Sbjct: 472 ATAHADGLAA----ARERELAAWLAKKLAPGHPCAVCGSAEHPAPARSRERVPER--EEI 525 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 ++L E A + L A + + T + + L Sbjct: 526 DEARAAERRLSERAAEAEKRRATTAGLLAEAHQRATGAAEGDARATAAIEGESREAAAAL 585 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 + + + A D + + ++E + Sbjct: 586 KRAREAAARVRALDV-----------------------EATSARGEVEAARARQEAAGAR 622 Query: 653 YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEE 712 A E+ A ++ Q+ + L ++L + + Sbjct: 623 RAAAEQHVAAAEAAGAELARQVQAAGAGPDTPAELAAARRELDALEAAAATARRAAGEAG 682 Query: 713 TVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 + + ++ A + +A A A A+ FD A AA Sbjct: 683 AGHASALE-----------RLASCSEEAARAEAAATEAHAAAAEACAAAGFDGLAACEAA 731 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL 832 L+ + + LE+ + + + A + ++ Sbjct: 732 LLAPEQRSALEE----------SLEARTVAARAAAERAGALEAELSGASAPDLPALEARR 781 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 A T + + + ++ + L + A++ +++ G + + Sbjct: 782 AATAGAAGAARDAVVRLEKDHERLRQLEARLGELEARAAELARELAVAGKVAEIARGHNA 841 Query: 893 --DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLL-------QRKASEALEVEVVDTWQA 942 ++F L+ + A+++L ++ GR+ L +R + L + V D W Sbjct: 842 LNMSLQRFVLAARLEEVAEAASRRLLQMSRGRFRLRHDTAVARRNQASGLSLVVEDAWTG 901 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALD 999 R LSGGESFL SLALAL LSD+V S R+D+LF+DEGFG+LD ETLD A+ Sbjct: 902 VTDRPVGALSGGESFLASLALALGLSDVVLRRSGGLRLDALFVDEGFGSLDEETLDDAVR 961 Query: 1000 ALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 L+ L SG+ +GVISHV ++ RIP +I++++ + + Sbjct: 962 TLEDLRKSGRVVGVISHVAELRRRIPARIEIQRKAEGSVAVVR 1004 >UniRef50_B4S800 SMC domain protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S800_PROA2 Length = 1226 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 183/914 (20%), Positives = 366/914 (40%), Gaps = 40/914 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL+G W IDFT P+AS+G+F ITGPTGAGK+T+LDA+C+ALY +TPR Sbjct: 1 MKILQLCFRNLNSLQGTWSIDFTAPPYASDGIFLITGPTGAGKSTILDAVCIALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M+R + +C AEV FE +R WSQ+R+R QPDG LQ PR E++ Sbjct: 61 LGRLTKSSNEIMSRMSGDCFAEVTFETDAGMFRCHWSQHRSRRQPDGELQNPRHEISDVH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GK++ K++D L TG+D+ RFTRSMLL+QG FA FL + +RA +LE++TGTE Sbjct: 121 TGKVIESKMRDVLLAIEERTGMDFDRFTRSMLLAQGSFAVFLQSDADKRAPVLEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + + L+ + + + ++ + +L + EKQL+ + Sbjct: 181 IYSEISRRVHERSREEKNHLQLKRIELETIDMMGESERCALEEQINEDRRSEKQLLERLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +EQQ+L WL + +L +E ++ ++ + E+ +P L L+ A+ A ++ + + Sbjct: 241 KEQQALQWLHQLRDLNEERVSIERESRELVVRRERFEPSLQRLNRAEKASHIEGMYRELL 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 R +E L + + + ++ L + R Sbjct: 301 SLREEQEEARSARDEAAALLPPAEERCDASAKAVNDAVRQHAEHERLLKGSRKLFSTVRL 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 ++ A + + LR A +A E TA + E Sbjct: 361 LDSRIADAHSSLDTLKTRHAGLRAKADDFLAAIA-----SAEQERQRVQEHLTASVAYLE 415 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + LV+ ++ R ++ + +++Q + +++ Sbjct: 416 ANACDKALVSELSTLLELFGRCNAFVFQLREAEEASEAARKHQLDLQQEKETIDEKVRKA 475 Query: 481 KTICEQEA-RIKTLEAQRAQLQAGQPCPL-CGSTSHPAVEAYQALEPGVNQSRLLALENE 538 + E+ + + + L +Q G+ P + A + + L L + Sbjct: 476 SSALEEASCQQQQLYSQLEATLDGRSLPEWRNEAALIARHEALFDAATIVAASLKDLRQQ 535 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 E+ L + E + L+Q+ L ++ + + ++ + + Sbjct: 536 HTICKEKIINAGDLLSKTVSGIAESETLREQLQQEVLHLEERVRLESRIRDLEDERSRLV 595 Query: 599 QPW-----------------------LDAQDEHERQLRLLSQRHELQGQIAA-HNQQIIQ 634 + + D R+L+ L + Q + A + + IQ Sbjct: 596 KGRPCPLCGSLHHPLVQATLPFHDDTATSLDSARRELKTLDDKIAGQKLLQAGYEKDRIQ 655 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQ----EDEEESWLATRQQEAQSWQQRQNELTALQNR 690 ++++ Q + + L + LP D E + + ++R + + Sbjct: 656 AEERLGQIVSAIASDLERFEQYLPLPGFPGDNAEPSIDAISLARAAVEERAEMTARVLGK 715 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + + L+ + + + + + ++ Sbjct: 716 AESIEEQLKRAGDRHGVLRDSLLALKSQAEKAGYRKEQALDELGRAEELVAKCIDDKAAC 775 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 + T L+ + + + + + + K ++ + + L + + Sbjct: 776 DERLITLLKPYRVKVETDEELSAVPD-----ILRSKHAAWDEENRRKELHERQLHDIDAF 830 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 + AL + + E+++ + + E + E+ + D + L Sbjct: 831 ILQQHLLLDALQTDIIEQDDEISRMKKDICELEEGRLELFDRKDVDRQEALLDERLAAAA 890 Query: 871 AQMTQQVEDWGYLN 884 ++ ++ ++ +N Sbjct: 891 EEVGRRQDEHAAVN 904 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 166/890 (18%), Positives = 326/890 (36%), Gaps = 58/890 (6%) Query: 190 FEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWL 249 E+ +L + +L L + + A +Q + Sbjct: 344 HERLLKGSRKLFSTVRLLDSRIADAHSSLDTLKTRHAGLRAKADDFLAAIASAEQERQRV 403 Query: 250 TRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHI 309 + ++E + LR E + Sbjct: 404 QEHLTASVAYLEANACDKALVSELSTLLELFGRCNAF--VFQLREAEEASEAARKHQLDL 461 Query: 310 RQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWR 369 +Q+ E ++ +++ + + ++L+ + +R A Sbjct: 462 QQEKETIDEKVRKASSALEEASCQQQQLYSQLEATLDG-----RSLPEWRNEAALIARHE 516 Query: 370 AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT-----LTADEVATALAQHAEQRPL 424 A F T L+ +QQ T ++K+ + ++ + L Q Sbjct: 517 ALFDAATIVAASLKDLRQQHTICKEKIINAGDLLSKTVSGIAESETLREQLQQEVLHLEE 576 Query: 425 RQHLVALHGQIVPQQKRL------------------------AQLQVAIQNVTQEQTQRN 460 R L + + ++ RL ++ + +E + Sbjct: 577 RVRLESRIRDLEDERSRLVKGRPCPLCGSLHHPLVQATLPFHDDTATSLDSARRELKTLD 636 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCP-LCGSTSHPAVEA 519 + Q+ + + ++ + + + + + P P G + P+++A Sbjct: 637 DKI--AGQKLLQAGYEKDRIQAEERLGQIVSAIASDLERFEQYLPLPGFPGDNAEPSIDA 694 Query: 520 YQALEPGVNQS---------RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL 570 V + + ++E ++K+ G+ LR L A+ Q ++ + Sbjct: 695 ISLARAAVEERAEMTARVLGKAESIEEQLKRAGDRHGVLRDSLLALKSQAEKAGYRKEQA 754 Query: 571 RQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE-LQGQIAAHN 629 + + + L + + E + +L + N Sbjct: 755 LDELGRAEELVAKCIDDKAACDERLITLLKPYRVKVETDEELSAVPDILRSKHAAWDEEN 814 Query: 630 QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 ++ +++Q+ +L E++ ++ +++ ++ + EL Sbjct: 815 RRKELHERQLHDIDAFILQQHLLLDALQTDIIEQDDEISRMKKDICELEEGRLELFD--- 871 Query: 690 RIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 + + L + E + V+ + + QTL + Q L Sbjct: 872 -RKDVDRQEALLDERLAAAAEEVGRRQDEHAAVNTSLQEIRHELQTLDVSMLKRHQRLAA 930 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 QF ++L S F D+ F A + ++ L LE ++ + Sbjct: 931 MSEQFRSSLHRSGFHDENDFSNARLTQEDRESLL-----LEEKKLNTDASLLDLRSAACV 985 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + + +E+++ +A +++RE G + Q+L+ D R +Q+ Q Sbjct: 986 KKHETLVSKNLTSSGIEEVEHSMADIEEEIRERGKRLGALEQRLQDDDMARSRQKEKADQ 1045 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKAS 929 IA + + W + LIGS +G K+R F Q LT + ++ AN+QL ++ RY L Sbjct: 1046 IASLVEGCRLWEQMYELIGSADGKKYRNFVQSLTFEMVIVHANRQLIKMTDRYFLVPDRK 1105 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTL 989 L++ VVD +Q VR TR LSGGESF+VSLALAL LS + S K R+DSLFLDEGFGTL Sbjct: 1106 NPLDLNVVDNYQGGEVRSTRNLSGGESFIVSLALALGLSSMSSRKVRVDSLFLDEGFGTL 1165 Query: 990 DSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 D ++L+TAL+AL L +GK IG+ISHV +++R+ Q+ V+ ++G S Sbjct: 1166 DEDSLETALEALSGLQQTGKLIGIISHVAVLRDRLTTQVFVRPLSGGKSS 1215 >UniRef50_A3HX95 Probable exonuclease n=1 Tax=Algoriphagus sp. PR1 RepID=A3HX95_9SPHI Length = 1010 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 167/1043 (16%), Positives = 403/1043 (38%), Gaps = 44/1043 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + L ++ L S + + I+F + + GLF I G G+GK+++L+ I LALY T R Sbjct: 1 MIPIRLEIQGLYSYREKQVIEFDQ--LTAAGLFGIFGAVGSGKSSILEGILLALYGSTER 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAF--WSQNRARNQPDGNLQVPRVELAR 118 LS+ + N ++ + E + EF+ + + + ++ Sbjct: 59 LSDRGEK-NSMLNLQSEELIINFEFQSGKNNVNTYLGRYAAKRNPKKFEEVRPAEHTFYE 117 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 +G+ + G+ F +++++ QG+F F++ P RAE+++EL G Sbjct: 118 KVEGQWEP-----ISAKAEEIIGMKKEHFKQTVIIPQGKFREFIDLTPGPRAEMMKELFG 172 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 E + +S K + E +L+ Q SG+ + E ++ + S ++ + ++L+ Sbjct: 173 LERF-DLSGKTGSLLKVVKEEKIRLETQLSGLEGFSKEILEEKSNSQKIQKKDHEELMLK 231 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARN-LRPHWE 297 Q + + + Q+ Q ++ ++ + + + A+ L+P W+ Sbjct: 232 LQLSETQMKQQEEIQKKAQQLKVFQTNFRELSNKKPEIEEKRLLHKEFITAKTYLKPIWD 291 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 +I + L + + + ++ + ++ QQ+ +++ + Sbjct: 292 QIHDTQKELEKYTTSVVDCERFKLRYIEEVKTLEDEEVELKSK-NQQRPDREAKIRDLKK 350 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 + + + + L + E +++ L + L + ++ Sbjct: 351 VLEVKRLQVKLDEANQKLETLKPELESKKASQNQLEAEVSTLEKQSEDLESPDIKVLSEL 410 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 R +++ ++ N+ Q ++ + + K + Q + Sbjct: 411 QTALRDWGIWEEDRAKLEKIKKQLQEEIVAVKNNLEQIFSKLPSEEKSLETWQKSQKQLI 470 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 ++++ +Q + + L L+ G+PCPLCG+ HP+ + + L A Sbjct: 471 LNLESERDQVMQKQGLGIHVHLLEDGKPCPLCGAVEHPSPLKSEKEKV-----ELKAKNE 525 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 E+ + + + + + EN ++ E+ + + +++ + + Sbjct: 526 EINQEKNKLEGILTLIQKEKENQIHLENHQRNSASKEEEILKIEKSLETMMEMISSH--G 583 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 I + +++ + ++Q QI + Q + IEQ ++ T Sbjct: 584 ISDASELKEKVVSLTNAGRDKEKIQQQIKSLRQSWNSQRGDIEQIEKSYQTAQLSQNTVF 643 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 ++ + Q + + +++ A + + + ++ +L ++ V+ E Sbjct: 644 SSISSKKEEIKDPTFCKQFFSKTADQIEA------TILKVEADIEEAIKLLEGKQKVLRE 697 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 +L ++ A L+ +A+++ F+++ A + Sbjct: 698 KREAQASNLTSLKG----FEKLKADAQSKLETLRAEYEKQKVKFGFENEAALVRLFEHSL 753 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 +++ ++ + + ++ + + + + + E++++ + Q + Sbjct: 754 DAEKVDLEIRDFDQKFAITESRINELKAEDGVLEFN--------EIAFEELKELVIQLKE 805 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 + S + +++K + ++ L++ Q+ + + L L +G F K Sbjct: 806 NASSSQNSLLLLSEEIKTIQSQLENKKLLLETFGQLENRESNLKELERLF---KGSGFVK 862 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + + L L + AN + +L L + + V+D R +TLSGG++F Sbjct: 863 YVSSIYLKELCNTANVRFMKLSKN-SLSLEIDDDNTFWVIDYLNGGKRRLLKTLSGGQTF 921 Query: 958 LVSLALALALSDLVSHKTRID--SLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SL LALAL++ V + D FLDEGFG LD L + L +L + +G+IS Sbjct: 922 QASLCLALALAEKVKALNQADQSFFFLDEGFGALDRNALRVVFETLKSLRHENRIVGIIS 981 Query: 1016 HVEAMKERIPVQIKVKKINGLGY 1038 HVE +++ I V ++ G Sbjct: 982 HVEELQQEIGVYAQITLDPEKGS 1004 >UniRef50_C9BXS9 Exonuclease SbcC n=12 Tax=Enterococcus faecium RepID=C9BXS9_ENTFC Length = 1042 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 195/1072 (18%), Positives = 405/1072 (37%), Gaps = 60/1072 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L+LKN E LF I+G TGAGKTT+ D I AL+ ET Sbjct: 1 MKPKKLQLKNFGPFINETV---DFSRLTEAPLFLISGKTGAGKTTIFDGITFALFGETSG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC- 119 + L E FE + +Y + + GN + Sbjct: 58 RLRSGKEMRSLFATPDEETSVTFSFEHQQMSYEIERKPEQVLAKRKGNGTKKQAAKVTLT 117 Query: 120 -----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 K + +L L LD +F++ +LL QG+F FL + ++ +L Sbjct: 118 IFDGKGKEIKQITKRTEADQLIRELMNLDAKQFSQIVLLPQGEFRNFLVSSSSDKETVLR 177 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLL-----TPEQVQSLTASLQVLT 229 L GT+ + Q + + E+ K + +L+ L+ + + E A L T Sbjct: 178 HLFGTQFFQQFNERLKEKAKQQQQKLDHLEQELHLLQKRFVLVKEEEPAAGFEAVLAQWT 237 Query: 230 DEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA 289 + + L +E+++L L + + + + R ++L+++ E+ + L+ + Sbjct: 238 NHQAILEKQITEEKEALTELQEKQKQLENSYYRFESLKKSYEEKTILINKQKELAAQKDE 297 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + W E + L Q+++E+ + A + ++ Q++ Sbjct: 298 IEEKKRWIGYYEFTQRLVEPIQRLQEIKVEKIELSQKSSEQTKKLAMTTQNYEEWQKNEA 357 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 ++ + ++ + + S R + +Q +++ + L Sbjct: 358 NRVRRQTKIKEAAQKLQNKQMMVPIVESLRSKKQDAEQLTISLDKEELNAEKLYQNLAIY 417 Query: 410 EVATALAQHAEQRPLRQHLVALH----GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 + T + Q + L + +Q+ + + + + + E Sbjct: 418 QERTRILQENLLDQEKLQEDRLAFGQLKYLDEKQQEIEKQKAKDTGSLAQIREELKKATE 477 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 + + ++ + + + + + + L+ G+PC +CGST HP + Sbjct: 478 EITKNSQLLKEQTEQAEQLKSQWAKQQIARLQLFLRPGEPCLVCGSTEHPIQQLKHEQPN 537 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 + ++ K+ ++ A ++ + + + E +L+Q L Q+ A Sbjct: 538 ----------KEDILKVEQQLAEAESAVERTQQIIAKSEAHENNLQQQLSDLEQKIMATN 587 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 L + L + ++ L ++ + ++ + ++E+ +Q Sbjct: 588 IQLAEQEEHLQQALKKAFPEITEQKTKTTLV---VIEQSLDRRKSKMANARIELEEIRQQ 644 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 A+ Q+ E+ + L Q E +S +Q+ + L + L + Sbjct: 645 AEKLEQQLAVYKQQQTEKNNQLQQLQGEIKSLEQQLQD-----TDSNCLEEEIRRLEKQL 699 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E + V + Q+ + L +Q +Q + ++K Q + L++ Sbjct: 700 EEDSNQLAVEQKAGVQLLQDLHTLRTQLDLQHEQIEKIDEKIEKEQERIAKKLESQ---- 755 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 + + + Q + + +R + + T + +Q Sbjct: 756 -----SYFSTIEEICAFAQQQAQYKENQRTVTSYHEEQLVTADRLRQLENIQLTETFPDT 810 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 E+I Q+L + + + +++Q + + ++ ++ L+ Sbjct: 811 EEISQQLEEIRRMIEIKQEKIYGLQEQKISNQKIYDECLSIYHTSQTKLDELTQLQQLSQ 870 Query: 886 LIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVE 935 + K ++ + L ++ +AN L RL RY + + LE+ Sbjct: 871 TFNGENPKKTSLERYVLQVYLQEVLQVANDHLQRLTKNRYQFELADTIGSYRGKTGLEIN 930 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSE 992 + D QA R TLSGGESF+ +L+LALAL+D++ + ID+LF+DEGFG+LD E Sbjct: 931 IYD-DQAGMSRSAHTLSGGESFIAALSLALALADVIQTQAGGVAIDALFIDEGFGSLDEE 989 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 L+ A++AL+ + + G+ IG+ISHV +KER+ QI++ G G SK+ Sbjct: 990 ALEMAMEALETIESEGRMIGIISHVRELKERVLQQIRID-TEGSGQSKIRYQ 1040 >UniRef50_Q58718 DNA double-strand break repair rad50 ATPase n=1 Tax=Methanocaldococcus jannaschii RepID=RAD50_METJA Length = 1005 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 151/1062 (14%), Positives = 383/1062 (36%), Gaps = 78/1062 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + +R+ N S G+ AI G G+GK+++ +A+ AL+ Sbjct: 3 MILKEIRMNNFKSHVN-------SRIKFEKGIVAIIGENGSGKSSIFEAVFFALFGAGS- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + + ++T+ E++FEV G Y+ + R Sbjct: 55 ----NFNYDTIITKGKKSVYVELDFEVNGNNYKIIREYDSGRGGAK-----------LYK 99 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GK A + + + G+D F S+ + QG+ A FL+ KP E+ E + +L G + Sbjct: 100 NGKPYATTISAVNKAVNEILGVDRNMFLNSIYIKQGEIAKFLSLKPSEKLETVAKLLGID 159 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPE------QVQSLTASLQVLTDEEKQ 234 + + + E K LE+++ + + E Q++ L + D+ + Sbjct: 160 EFEKCYQKMGEIVKEYEKRLERIEGELNYKENYEKELKNKMSQLEEKNKKLMEINDKLNK 219 Query: 235 LITAQQQEQQSLNWLTRQDELQQE-ASRRQQALQQALAEEEKAQPQLAALSLAQPARNLR 293 + + ++ N + L ++ ++ ++ + + ++ + L+ AR Sbjct: 220 IKKEFEDIEKLFNEWENKKLLYEKFINKLEERKRALELKNQELKILEYDLNTVVEARETL 279 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN--TW 351 + E +L ++IE L+S + ++++ ++ +N + Sbjct: 280 NRHKDEYEKYKSLVDEIRKIESRLRELKSHYEDYLKLTKQLEIIKGDIEKLKEFINKSKY 339 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + D N+ + E L+ +++ E+ ++ Sbjct: 340 RDDIDNLDTLLNKIKDEIERVETIKDLLEELKNLNEEIEKIEKYKRICEECKEYY--EKY 397 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE--------QTQRNAAL 463 + E L + L + +K + L+ I + +E + Sbjct: 398 LELEEKAVEYNKLTLEYITLLQEKKSIEKNINDLETRINKLLEETKNIDIESIENSLKEI 457 Query: 464 NEMRQRYKEKTQQLADVKTIC-EQEARIKTLEAQRAQLQAGQ-PCPLCGSTSHPAVEAYQ 521 E ++ + ++ ++ E + IK L+ +L+ + CPLC + P E + Sbjct: 458 EEKKKVLENLQKEKIELNKKLGEINSEIKRLKKILDELKEVEGKCPLCKT---PIDENKK 514 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 ++++L E++++ ++ + ++ + K++ ++EN ++L+ Q Sbjct: 515 MELINQHKTQLNNKYTELEEINKKIREIEKDIEKLKKEIDKEEN-LKTLKTLYLEKQSQI 573 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + + L + LD+I + + + + + + +++ Q+ QY + Sbjct: 574 EELELKLKNYKEQLDEINKKISNYVINGKPVDEILE--DIKSQLNKFKNFYNQYLSAV-S 630 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + + + ++E ++ + E+ L++++ +L + L Sbjct: 631 YLNSVDEEGIRNRIKEIENIVSGWNKEKCREELNKLREDEREINRLKDKLNELKNKEKEL 690 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + + E + + ++ D + Sbjct: 691 IEIENRRSLKFDKYKEYLG-----LTEKLEELKNIKDGLEEIYNICNSKILAIDNIKRKY 745 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 +D + +L + E + + ++E + + + +H++ + Sbjct: 746 NKEDIEIYLNNKILE-----VNKEINDIEERISYINQKLDEINYNEEEHKK--------I 792 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 E +QEL ++ E T +++ ++ ++ L ++ ++T+ VE Sbjct: 793 KELYENKRQELDNVREQKTEIETGIEYLKKDVESLKARLKEMSNLEKEKEKLTKFVEYLD 852 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQ 941 + + G + F+ + + + + N+ + Y + EV Sbjct: 853 KVRRIFG---RNGFQAYLREKYVPLIQKYLNEAFSEFDLPYSFVELTK---DFEVRVHAP 906 Query: 942 ADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 + LSGGE V+L+L LA+++ + R++ + LDE LD + Sbjct: 907 NGVL-TIDNLSGGEQIAVALSLRLAIANALIGN-RVECIILDEPTVYLDENRRAKLAEIF 964 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 + + + I +I+H +++ V I VKK + K+ Sbjct: 965 RKVKSIPQMI-IITHHRELEDVADVIINVKKDGNVSKVKING 1005 >UniRef50_Q2LRE3 Exonuclease n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRE3_SYNAS Length = 1223 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 191/912 (20%), Positives = 365/912 (40%), Gaps = 23/912 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL +R KNLNSL GEW++DFTR + S+G+FAITGPTG+GKTTL+DA+CLALY TPR Sbjct: 1 MRILGVRFKNLNSLAGEWQVDFTRPAYISDGIFAITGPTGSGKTTLMDAVCLALYGSTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T EC AEV FE YR WSQ RA +PDG LQ R E+ Sbjct: 61 LGKVTKSGNEIMSRQTGECFAEVTFETAKGRYRCHWSQQRAYKKPDGELQQARHEIVDAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G++L K+ + +TGLD+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTE Sbjct: 121 SGRVLKSKINEVGTFIEKVTGLDFERFTRSMLLAQGGFAAFLQAPPHERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ +LE LQA+ G+ +L+ E+ ++L +L+ D E +L + Sbjct: 181 IYSRISMKVHERRSEELDKLELLQAELKGIAILSEEEERALQDTLRKKQDWETELAGRIK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +++L WL L++E + Q ++ +P L + A +L + IA Sbjct: 241 EGEKALAWLEGMAVLEKELEELDRKRQDFELRQKAFEPDSHRLERSLLAMSLEGDFRGIA 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 +++ + L K + L + + ++ + + R Sbjct: 301 TLRELQTQEMEELHDAVATLPEKEKTATEGLFARKKAESLLNETRTRQHSEGEVLKKVRD 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQ----LTHAEQKLNALAAITLTLTADEVA---- 412 ++ Q ++ + +++ L +QK + A + A Sbjct: 361 LDSRLGEQEKQLVEKDRAIAEIESQEKEYGNLLEQGKQKWKEVHAALEAIYAYREKFAAD 420 Query: 413 --------TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 A R + ++V + + + E + Sbjct: 421 EALIANFSAIERGFASLRDVEAKWNKACRELVAAAAQKDSALAELADREGEHEKIRRVFE 480 Query: 465 EMRQRYKEKTQQLADVKTICE--QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA 522 + R+ +++ ++L+ + E + +R +L L Sbjct: 481 KTRKAHEDVREELSVILQGREFSTWRNEMDVLRERERLLIQTEEILKRIDRIAPALVSLK 540 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 + + + + +E+K + A L A+ Q+ N + L ++ + L Sbjct: 541 TQLEILNADRDRIISELKACSDHKALLEKTTAALEAQV-SLLNRIRDLEEERKRLADGRP 599 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 +I + ++E ++ L+ L ++ A + Q + Sbjct: 600 CPLCGATEHPYARGNIPAPNEVEEELQKTKNELNSASNLLNRLEAERARTEAGIQHSKNE 659 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++ L A+ + A + + A+ ++++ E Sbjct: 660 REEKAEALKADEKQAADFLSRLQIEASPPERAIRIRAELATVMAITAEMEKIIRQAEGKD 719 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + ++ V + + + + + + + + D A + Sbjct: 720 KQEKSAQDALDKVRKTFERAEKALQEARHNAEKAAADHERSERDCATLTEEMDKARADA- 778 Query: 763 FDDQQAFLAALMDEQTLTQL---EQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 D + F + + + L + ++ + R +TL +T + L + R Sbjct: 779 LADVKPFGITRLPLEKIDVLLNGLRARKEAWHARENEKTLQQKTLDELKAGIEKREALLA 838 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 +L + +++ + + ++ + + D + ++ + + + + E+ Sbjct: 839 SLEEDLAARRRDREKLVRDRESLFGARRALFGEKIADEEEKRLTAEVEKAGNALEKAREN 898 Query: 880 WGYLNSLIGSKE 891 G + I Sbjct: 899 CGKIEKEISMLR 910 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 187/884 (21%), Positives = 340/884 (38%), Gaps = 41/884 (4%) Query: 189 VFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNW 248 ++ +S E Q V + L + L ++++ + + QE++ N Sbjct: 333 ARKKAESLLNETRTRQHSEGEVLKKVRDLDSRLGEQEKQLVEKDRAIAEIESQEKEYGNL 392 Query: 249 LTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA-RNLRPHWERIAEHSAALA 307 L + + +E +A+ + + +A S + +LR + + L Sbjct: 393 LEQGKQKWKEVHAALEAIYAYREKFAADEALIANFSAIERGFASLRDVEAKWNKACRELV 452 Query: 308 HIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ--EHDRFRQWNNEP 365 Q + L IR K + ++ L+ LQ E +R + Sbjct: 453 AAAAQKDSALAELADREGEHEKIRRVFEKTRKAHEDVREELSVILQGREFSTWRNEMDVL 512 Query: 366 AGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA--TALAQHAEQRP 423 Q + + + L + +L L A + ++ A A + Sbjct: 513 RERERLLIQTEEILKRIDRIAPALVSLKTQLEILNADRDRIISELKACSDHKALLEKTTA 572 Query: 424 LRQHLVALHGQIVPQQKRLAQLQVAI--------------------QNVTQEQTQRNAAL 463 + V+L +I ++ +L V +E + L Sbjct: 573 ALEAQVSLLNRIRDLEEERKRLADGRPCPLCGATEHPYARGNIPAPNEVEEELQKTKNEL 632 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 N + A + + + +A+ + Q A +A+ Sbjct: 633 NSASNLLNRLEAERARTEAGIQHSKNEREEKAEALKADEKQAADFLSRLQIEASPPERAI 692 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + ++A+ E++K+ + Q + L + + + Q + Sbjct: 693 RIRAELATVMAITAEMEKIIRQAEGKDKQEKSAQDALDKVRKTFERAEKALQEARHNAEK 752 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRL--------LSQRHELQGQIAAHNQQIIQY 635 A + + + +D L + L + A + Sbjct: 753 AAADHERSERDCATLTEEMDKARADALADVKPFGITRLPLEKIDVLLNGLRARKEAWHAR 812 Query: 636 QQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI---Q 692 + + +Q+ L G E LA R+++ + + + L + + + Sbjct: 813 ENEKTLQQKTLDELKAGIEKREALLASLEEDLAARRRDREKLVRDRESLFGARRALFGEK 872 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 + L E EN ++ ++ L + +LQ + A L K + Sbjct: 873 IADEEEKRLTAEVEKAGNALEKARENCGKIEKEISMLRERIVSLQIRTKQRAGELMKTKQ 932 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 +D L+ S F D+ FL++ + E+ L + KQ L ++ + +TLA Q+ Sbjct: 933 HWDDRLRRSGFADESDFLSSCLTEEERQGLLEKKQILLREKAELDARRQDRLDTLAVQQE 992 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 + D + E +++++ +L++ G + Q L + R+ Q +Q+I + Sbjct: 993 KKLTDQSS-----EVLKEQIRTGDMELKQLRLDIGGMVQNLSDNESRRKNLQERLQRIDR 1047 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEAL 932 ++ W L+ LIGS +G KFR FAQGLT + + AN++L + RYLL + L Sbjct: 1048 QKRECARWDDLHQLIGSADGRKFRNFAQGLTFEMMTVHANRRLREMTDRYLLIHDEAHPL 1107 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSE 992 E+ V+D +QA +R T+ LSGGESF+VSLALAL LS + S R+DSLFLDEGFGTLD + Sbjct: 1108 ELNVIDNYQAGEIRSTKNLSGGESFIVSLALALGLSQMASRNVRVDSLFLDEGFGTLDED 1167 Query: 993 TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 L+TAL+ L L GK IG+ISHV A+KERI QI+V G Sbjct: 1168 ALETALETLAGLRQDGKLIGIISHVAALKERIGTQIQVIPETGG 1211 >UniRef50_B5YJS0 ATPase involved in DNA repair, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJS0_THEYD Length = 1031 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 204/1069 (19%), Positives = 432/1069 (40%), Gaps = 73/1069 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M +SL + LNS E KIDFT+ F LF I G TG GK+T+LDAI L++Y +TPR Sbjct: 1 MLPISLIFEGLNSYAREVKIDFTK--FYRTKLFGIFGITGGGKSTILDAIILSIYGKTPR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L++ + + E FE+ ++ ++ R+ Sbjct: 59 LAST--KIKEAINPQRGVINIEFTFEIGRRRFKIQRGIDQ-------RETQIRLYRLEED 109 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +A+K + E + GL Y F + ++L Q QFA L +P +RAEL+ L Sbjct: 110 KEIPIAEKSNEFNEKIKEIIGLSYEEFCKVVILPQNQFAELLRLEPAKRAELIGNLFDLN 169 Query: 181 IYGQ-ISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 +G+ + + E+ + ++ Q + + ++ ++ E + + + +T +L Q Sbjct: 170 YFGEPLYSKFSEKFLKLESTIQDKQRRLNELSEISQESIINKEREVDEITKALGELRQKQ 229 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 ++ + LN L +L + ++ LQ+ ++ + + + + + +E + Sbjct: 230 KELMEKLNILRNFKQLSDKKKELERELQKMETKKIEIESLKNKIQMDDELAPYKKSFEEL 289 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 ++ +Q+ EE+ L+ + R + Q+ + L ++E ++ Sbjct: 290 KNLKKSIEANKQKHEELARELKIIESRFEKQREQKEEFEKFFSQRNEELIGKIKESEQLV 349 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLN-------------------ALA 400 + E + Q+ + + L +++ ++++ Sbjct: 350 ELEQEIKSLLDKEQQRAKEMKKLNLEFKEVDEQLKRIDTETTQLMKNIEKNKALFENTQL 409 Query: 401 AITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRN 460 D + AL + E + L++ + L + ++K+ + IQ +++ Sbjct: 410 NDEELRLYDLLPNALLKLNEIKNLKEEIEILIKKTERERKKWEESFAQIQKEFRDRFNLT 469 Query: 461 AALNE-----MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 A E + + +E + + ++ L G+PCP+CGST HP Sbjct: 470 IATYEEIDSVIVAKTEEIKELKDKLLRELDEFKVKNLAFTLSKTLLEGKPCPVCGSTEHP 529 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 ++ + E ++K++ E + I +++ ++ + Sbjct: 530 KPAE------SIDDKNIALREEKLKEVDENIFKIEDVKAKIKPLMEKVFISKTNIETYAK 583 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ- 634 ++ + +T + L + ++ W +A+ E+ + E+ ++ N + + Sbjct: 584 EISDKKSKLTKA-EHELSQIISVKLWANAEQLFEQIKNKKKKNDEVMKELNYLNSEFHEK 642 Query: 635 --YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQ 692 + + Q++ + T + L + ++ + E + T + ++ Sbjct: 643 MKLKNDVTQKRVEIFTKIQQTHKELEEIKKDTKEKKDKLNEKTGGKTSYEIKTEAEKELE 702 Query: 693 QLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQA 752 + L + ++ L ++ E +Q+ ++ L A+ ++ Sbjct: 703 IIKKRSLQLENELKDLDIKKQNTLIAMERITEGIKKDEQKQKEIKASLDLKAKEMR---- 758 Query: 753 QFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQ 812 D A ++DE+T L+ + E + +A+ + + L + Sbjct: 759 -----------IDVSELAAIILDEETKKSLKNTVEEFEKEFNKAKGALDNILKNLEEI-- 805 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 +++ ++ +A+T+ K+ ++ G +++Q++++ D +++Q L ++I Sbjct: 806 ---PIKAIQPDELQETEKFIAETNDKIAQSNEKLGTLKEQIRKEKDMLKEKQLLSKEITL 862 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEAL 932 M + E+ L +L KE KF + L +V L N L L GR + L Sbjct: 863 MENEFENVKLLKNLTYGKEMVKFFSWQL---LKEIVKLTNGILRTLIGR-RFSINVNPNL 918 Query: 933 EVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHK--TRIDSLFLDEGFGTLD 990 E V D + R TLSGGE+F+VS ALALALS + K I F+DEGF +LD Sbjct: 919 EFTVSDLLY-NKERSVNTLSGGETFIVSFALALALSSYIQSKRMRAIQFFFIDEGFSSLD 977 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 E LD+ L+ L + + +G+ISH+E +K+ IP I +K+ Sbjct: 978 RELLDSVCAVLNELKSQDRLVGLISHIEELKQVIPNSINIKRDITGSSI 1026 >UniRef50_Q5SIS6 Exonuclease SbcC n=3 Tax=Thermus RepID=Q5SIS6_THET8 Length = 966 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 226/1043 (21%), Positives = 389/1043 (37%), Gaps = 82/1043 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L L L+ + +DF+ LFAITGPTG+GK+TLLDAI ALY + PR Sbjct: 1 MRPLRLELEGFGPYRERQAVDFSDVE-----LFAITGPTGSGKSTLLDAIAFALYGQVPR 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + + A+ + F V YR S++ R RV L Sbjct: 56 VGRQVGTLK---HPAAAKAWVSLTFRVGERVYRVERSRSEKRG-------DARVYLLEGG 105 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + + ++ A L GLDY FTR++LL QG+F FL +PKER +LL EL Sbjct: 106 ERLLDLPTLEAVNRALADLVGLDYEAFTRALLLPQGEFDRFLKGEPKERRQLLLELFELS 165 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 + E+ E +L+ + +G++ TPE ++ L +L E +L + Sbjct: 166 RLERARQKAAERRGLLLEEKGRLEGELNGLSAATPEALEELERALAASRAEAARLEEEAR 225 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++L E + L+ A E+ LS A+ A P W Sbjct: 226 GVRKALAEAEALLEDLRRRQALAARLEALKARAEEMARVEERLSRAEEAERALPLWRDYQ 285 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + AAL + +EE RL++ A R ++ S E ++ Q+ Q+ F Sbjct: 286 KKRAALQATEKALEEAEGRLRALEARREAL-----GFSPEALERAQAAYAEAQDLKAFEA 340 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA--DEVATALAQH 418 +A S Q +L + L AL A L L A + A+ Sbjct: 341 LLARAPAGKAPASGPDPATA-----QARLEEVLKALEALGAELLRLRAWAEAWEALRAKE 395 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ-EQTQRNAALNEMRQRYKEKTQQL 477 A + + L L + ++ L + ++ +Q AL R+ ++ + L Sbjct: 396 AALAEVGEALARLEAEGKEAREARDALALRLKEAEAHALSQALKALEAERKALEKAQEDL 455 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + +E R L A L+ G+PCPLCG H + + Sbjct: 456 DRRREALLREERRLGLLAYHDLLEPGKPCPLCGGVVHALPPLPEVPD------------- 502 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 L L + A+ ++L R E EA L +AL + + L+ Sbjct: 503 ----LAGARRALEEEAQALARRLARLEAEAGDLAARLRAL--EVEPRPGDPEALKGALEA 556 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + L + + LR ++ E + + + E L Sbjct: 557 AEARLQDLRDRYQALRGEARALEREVAALRAREAEARGGASREDLASRLEAAEARRLALE 616 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLE 717 + + L + L L+ +++L E+ + E Sbjct: 617 EEAGRLAAGLRRHLEAKTGGLGVGPYLRRLKEEVERLKG-----------LAAEDARLRE 665 Query: 718 NWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 + + AL ++++ + A + + + + Sbjct: 666 EAGALRAELSALRARKEEQAKALAEAEAATR-------------GLMPEAEAQGLALSPG 712 Query: 778 TLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 L + +A+ VE +++ LA+ Sbjct: 713 EREALRAELEAFRKDLAEAEAAWRSL-----PPLSGPAPTLEEAQGRVEALRKALAELEG 767 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 +L E +G + ++++ + +++ + +A++ ++ W L + F Sbjct: 768 RLEEKRKEEGALEDRVERLRKDLARRREVEGALARLVAELALWEKLA---LDLQAHNFPA 824 Query: 898 FAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESF 957 + GL +LV A++ L L G R A++ E VVD W R RTLSGGESF Sbjct: 825 YLLGLKQRSLVERASELLYTLSGGRY--RFAAQGDEYLVVDLWAEATARQVRTLSGGESF 882 Query: 958 LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 L S + ++++LFLDEGFGTLD E L+ L++L G+ +GV++HV Sbjct: 883 LAS-LALALALSEELSRGKLEALFLDEGFGTLDPEALELVAGILESLPTRGRLVGVVTHV 941 Query: 1018 EAMKERIPVQIKVKKINGLGYSK 1040 EA+ ER P +++V+K + Sbjct: 942 EALAERFPARLRVRKHPWGSRVE 964 >UniRef50_B8FHR0 SMC domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHR0_DESAA Length = 1223 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 215/961 (22%), Positives = 392/961 (40%), Gaps = 109/961 (11%) Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQ-AQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 G E Q A E+ AR +L++L+ + + +++Q L + + + L Sbjct: 258 GLENLKQQQAAFDEKQAQARPDLDRLKTGRQAHDLEADYDKLQDLRKRQEEGSKVQAALE 317 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 +Q+L + + A + Q Q+ A K L L +L Sbjct: 318 EKLANNRQALKDGSAAKDAAAAALKSTQENQEKEARIIKDVRTLDT-RLKSAGEDLEQAE 376 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 +++ E + ++I +++Q+T + + +++ + + +SL Q Sbjct: 377 KKVLERKDSTRKQEKEIAAARSQIQATKEKLSE-KEAFIRKNKDCESLGKSLTGIEQIAG 435 Query: 357 RFRQWNNEPAGWRAQFSQQ-----------TSDREHLRQWQQQLTHAEQKLNALAAITLT 405 RF++ +N+ AG + +Q + +QQL +E L A Sbjct: 436 RFQEASNDHAGKKKSLTQAKAAASKAKTKHEKLHKQYESEKQQLEKSENSLKARKKELER 495 Query: 406 LTADEVATALAQHAEQRPLRQH----LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 + + ++ LR L + + +K+ + +Q + + + Sbjct: 496 ILQGKSWEDWKENNSSLNLRLEKLTNLNSTCARADEAKKKTLIDKKTLQVNQGKLPELSK 555 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA----- 516 + ++++ + + + + ++ +E +R +L G PCPLCG+ HP Sbjct: 556 TIESLKEKRSVQEALVCNAEEKHLDACKVYDMEKERKKLSDGAPCPLCGALEHPYAVGNV 615 Query: 517 -VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLR---- 571 + + E ++ L + ++K ++ + L ++ + L + + + + Sbjct: 616 PQKEDTSRELEQSRKILNEINQSIQKASQDYSLLESEIQQLNNGLNALKADLKKEQDKIL 675 Query: 572 --------------------QDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ 611 +D + Q+ + ++ D ++ E E++ Sbjct: 676 DGLKSLELPADLKDATLTVMEDIERCNQENKTCLDIISKARHKKDAVEELEKKFHEAEKK 735 Query: 612 LRLLSQRHE--------LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE 663 + + Q+ E + + Q + +E+ Q L + Y Sbjct: 736 IPDIRQKAESALHARESALENQKRSEEDLAQLELSLEKSQSELQLAIAPYGSFEISAKSV 795 Query: 664 ESWLATRQQEAQSWQQRQNELTALQNRIQQLT---------------------------- 695 + L + + + + +R E L + L Sbjct: 796 KVILDSLKSRLKEYDERLKEKDELSKELSGLEASLKSFAALLEASQKELESALKEKTERK 855 Query: 696 --------------------PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQT 735 + L Q+ + + ++ + +L + + Sbjct: 856 AGFDALSKERRSLFGGKDPDQEEKALAQAVKEAALRLEAAQKKCAELESEKQSLEDRLKE 915 Query: 736 LQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQ 795 L + A L+KA A F L AS FDD++A+ AAL+ ++ L +LE LK+ L ++ + Sbjct: 916 LAKSLEEGANKLEKAGAAFQANLSASGFDDEKAYAAALLPKEELKRLEDLKKGLNQEKIR 975 Query: 796 AQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQ 855 TL+ Q +TL + + +E + E A+ K + G I Q+L Sbjct: 976 LATLMEQQTKTLQEEK-----SLNKTNRDMESLTGENAELSDKAKAVQEKIGAIAQELSA 1030 Query: 856 DADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL 915 ++Q+ L+ I +++ WG L+ LIGS +G KFR FAQGLT + +V AN+ L Sbjct: 1031 HEKLAEKQKGLLNDIEAQSKECGKWGRLHDLIGSNDGKKFRNFAQGLTFEIMVSHANKHL 1090 Query: 916 TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKT 975 + RYLL R +E L++ V+D +QA VR T+ LSGGESF+VSLALAL LS + S Sbjct: 1091 QTMSDRYLLIRDPNEPLDLNVIDNYQAGEVRSTQNLSGGESFIVSLALALGLSGMASRNI 1150 Query: 976 RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKING 1035 R+DSLFLDEGFGTLD ETLDTAL AL L GK IGVISHV+A+K+ IP QI+V+ N Sbjct: 1151 RVDSLFLDEGFGTLDDETLDTALSALSNLKQDGKLIGVISHVQALKDCIPCQIQVEPDNS 1210 Query: 1036 L 1036 Sbjct: 1211 G 1211 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 176/905 (19%), Positives = 349/905 (38%), Gaps = 21/905 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR KNLNSL GEW+IDF + S+G+F I+GPTG+GKTT+LDAICLALY +TPR Sbjct: 1 MRILRLRFKNLNSLPGEWEIDFNSVDYTSSGIFTISGPTGSGKTTVLDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MTR T EC +EVEF Y WSQ RARN+PDGNLQ + ELA Sbjct: 61 LPSITGSSNEIMTRHTGECFSEVEFSANSGHYLCHWSQRRARNKPDGNLQGYKHELAYAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+I+ +K TG+++ RFTRS++L+QG FAAFL K ER+ LLE++TGT+ Sbjct: 121 SGEIIENKPSKTASCVEEATGMNFKRFTRSVMLAQGNFAAFLKEKSDERSGLLEQITGTD 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ ++ ++L+ + + L +PE++Q L + + E + + + Sbjct: 181 IYTTISIAVHERKRAENETKDRLEERLGEIRLRSPEEIQELKNTRIIKQKEVEAVSAQAK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q+ ++WL D+L + +Q ++ +A+P L L + A +L ++++ Sbjct: 241 EVQEKISWLENLDKLSKGLENLKQQQAAFDEKQAQARPDLDRLKTGRQAHDLEADYDKLQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + + +L + +A L+ Q++ + R Sbjct: 301 DLRKRQEEGSKVQAALEEKLANNRQALKDGSAAKDAAAAALKSTQENQEKEARIIKDVRT 360 Query: 361 WNNEP----AGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA-----DEV 411 + + ++ R+ ++++ A ++ A A + Sbjct: 361 LDTRLKSAGEDLEQAEKKVLERKDSTRKQEKEIAAARSQIQATKEKLSEKEAFIRKNKDC 420 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 + + ++K L Q + A + + + +Q+ + Sbjct: 421 ESLGKSLTGIEQIAGRFQEASNDHAGKKKSLTQAKAAASKAKTKHEKLHKQYESEKQQLE 480 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRA-----QLQAGQPCPLCGSTSHPAVEAYQALEPG 526 + L K E+ + K+ E + L+ + L + + + L Sbjct: 481 KSENSLKARKKELERILQGKSWEDWKENNSSLNLRLEKLTNLNSTCARADEAKKKTLIDK 540 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 E+ K E R +A+ + +A + E+ + Sbjct: 541 KTLQVNQGKLPELSKTIESLKEKRSVQEALVCNAEEKHLDACKVYDMEKERKKLSDGAPC 600 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 L L+ + +D + +E+ I +Q + +I+Q L Sbjct: 601 PLCGALEHPYAVGNVPQKEDTSRELEQSRKILNEINQSIQKASQDYSLLESEIQQLNNGL 660 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ---LTPILETLPQ 703 + + L + ++ + + Sbjct: 661 NALKADLKKEQDKILDGLKSLELPADLKDATLTVMEDIERCNQENKTCLDIISKARHKKD 720 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + E + + + ++ + +++ + + + L + + + + Sbjct: 721 AVEELEKKFHEAEKKIPDIRQKAESALHARESALENQKRSEEDLAQLELSLEKSQSELQL 780 Query: 764 DDQQA---FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 ++A + L L+ + + + ++ L + + A + A Sbjct: 781 AIAPYGSFEISAKSVKVILDSLKSRLKEYDERLKEKDELSKELSGLEASLKSF-AALLEA 839 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 +E +E + + + + D + + Q + + ++ + Sbjct: 840 SQKELESALKEKTERKAGFDALSKERRSLFGGKDPDQEEKALAQAVKEAALRLEAAQKKC 899 Query: 881 GYLNS 885 L S Sbjct: 900 AELES 904 >UniRef50_A6G5S8 Nuclease SbcCD, C subunit n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5S8_9DELT Length = 646 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 118/360 (32%), Positives = 173/360 (48%), Gaps = 21/360 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL G +++DF P GL AITGPTGAGKTTLLDAICLAL+ TPR Sbjct: 1 MKILAVRGKNLASLHGHFEVDFRAPPLDRAGLVAITGPTGAGKTTLLDAICLALFDRTPR 60 Query: 61 LSNVSQ-------------------SQNDLMTRDTAECLAEVEF-EVKGEAYRAFWSQNR 100 +N ++ + AEV+F V + A W R Sbjct: 61 FANRGGVTIGRAPGGAPGEGGLRANDVRGILRHGAVDGWAEVDFLGVDDRVWTARWEVRR 120 Query: 101 ARNQPDGNLQVPRVELARCADGK-ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 AR + DG +Q +++L+ G+ + AD+ D LE GLD+ +F RS+LL+QG+FA Sbjct: 121 ARGRHDGRIQGQQMKLSDAVTGRAVEADRKLDVLEAIEARLGLDFDQFRRSVLLAQGEFA 180 Query: 160 AFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQ 219 AFL A +RAELLE +TGT +Y ++ FE+ K A EL+ L+ + G+ L Sbjct: 181 AFLEASGSDRAELLERMTGTRLYRELGRAAFERAKQADAELDLLRRELDGLDSLDEAART 240 Query: 220 SLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQ 279 L A ++ LT +L A+ Q + W R EL++ A+R + ++ A Sbjct: 241 QLKAQVEALTQARAELTRARAQAEADRTWHARLGELERGAARAKAEVEGAEQALRALDGD 300 Query: 280 LAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSA 339 L + A R E + ++ + L + RA + A + Sbjct: 301 ARTLGWIEAALPWRERAAERGEWTREADEREEERRFITGELGGMVEQRARLVRDGAAREE 360 >UniRef50_UPI00016C3AE4 exonuclease SbcC n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3AE4 Length = 1044 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 164/1057 (15%), Positives = 353/1057 (33%), Gaps = 34/1057 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M ++L S K E +I F P L+ ++G G+GK+++ DA+ AL+ Sbjct: 1 MIPQRVKLSGFLSYKDEQEIRFDGAP-----LWMLSGTNGSGKSSIFDAVTFALFGHHRG 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 SQS +L+ ++ E +F + + YR + + ++ QV + + Sbjct: 56 ---GSQSAAELINKEATTLSVEFDFTSERQLYRIKRTVRKRQSGVASTQQVLKHTHSEIT 112 Query: 121 DGKILA----DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 A + GLDY FT S+LL QG+ L++ P RA +L + Sbjct: 113 GETWEAVAGTEYRAKFDAWVKDKIGLDYETFTSSVLLLQGKSEKLLDSTPAGRAGVLARI 172 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 E Y ++ ++ ++ ++ELE L Q GV +T E+ + A + L + ++ Sbjct: 173 VDLERYQKLHGKADDKRRALKSELEGLTNQLLGVKEVTNEEYAEVEAQILELDEARLRVQ 232 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 R + Q + + LQ A A + + R++ P Sbjct: 233 ERIDHLNALELRARRWTDTQAKLQGVRAKLQGAEKLLGTAVAIEKDHTRLRELRDVLPAV 292 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 I + + + + + R + ++ +L + + + Sbjct: 293 NTIVTERGRVNASERNTDRLTKEREEVTETRRKTDNTLSQLRKKLAALKTTQTENEAKKG 352 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 E + Q + + +L + +A + T E LA Sbjct: 353 HLETRLRELTAVLEKVKQVEDAESEIARLDDELKPFPKDTDAR--VREFQTEHERLALLA 410 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV-TQEQTQRNAALNEMRQRYKEKTQ 475 QH + + V ++++ + ++ + + + + +++ Sbjct: 411 QHVALLDRLHQDRSELTKAVTAERQVRADESRLKAEGIKAKEDFTQLEADAKAAREDRAA 470 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLAL 535 + + + L + + C CG P + A E ++ Sbjct: 471 KDQATAEARALARQARELADEFKSMTGVTKCRACGQKLTP---EHFADEKKARETEAKKA 527 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 E +K L R + D + + + LR + + TA + + Sbjct: 528 EERLKTLTVGAEKARTREDELAAKEVSERKRLTDLRDRWKDADAALKQTTADIKRLTEAC 587 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 L + + + + + + + IE ++ L Sbjct: 588 RQTYFALPDEFKQKLGPSEPADWSAVTYPNRQDLAALNDEARGIELTRRRLKAAQEEAKK 647 Query: 656 TLPQEDEEESWLATRQQEAQSW-----QQRQNELTALQNRIQQLTPILETLPQSDELPHC 710 + +S + ++ + E A Q+ + + LE + Sbjct: 648 AEALRAKLDSARERLARAQRALPGGDPGALRQEYVAKQSEEKSVKAALEAGKKEITATEG 707 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFL 770 + ++ + + + + + + +S+++A+ A Q + Sbjct: 708 DIERYQRAVNNAEQELVTIAGKLELEESSRRQSGESIERAKKALPAAWQK-PLETAGLTD 766 Query: 771 AALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ 830 A ++ + + + Q + A+ + + Q + + + ++ Sbjct: 767 RARWQDELDELVTKNTEARYTQLQAARGGLDPLRAEIKQLEGEADAFPEEERRSPDDVRN 826 Query: 831 ELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSK 890 E+A ++L + + + D R+Q+ L ++ + L L+G Sbjct: 827 EVAAARKELDLRNQQHLDALGRRRVLDDYRRQRFELAERFRAVDADHNRHKVLAELLG-- 884 Query: 891 EGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR------KASEALEVEVVDTWQADA 944 D+ ++ +V AN L RL G L R +AL++E + Sbjct: 885 -RDRLQRHLVRQAERQIVDYANAVLDRLSGGQLFMRLVESEAGTDKALDLECANRVTGGG 943 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVSHK-TRIDSLFLDEGFGTLDSETLDTALDALDA 1003 + LSG + F V++ALAL + S + I+S+ +DEGFG LD + L Sbjct: 944 AINVAFLSGSQRFRVAVALALGIGQYASKQHRPIESVIIDEGFGCLDRAGRQVMIQELQN 1003 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 L I ++SH E + P K + +G Sbjct: 1004 LRGHLHCILLVSHQEEFADAFPDGYKFELQDGATRVS 1040 >UniRef50_A6UUX2 SMC domain protein n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UUX2_META3 Length = 994 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 146/1058 (13%), Positives = 370/1058 (34%), Gaps = 84/1058 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I ++ +KN S I F + G+ I G G+GK+++ +A+ AL+ Sbjct: 1 MIIKNINIKNFRSHSN-TDISFKQ------GITTIIGENGSGKSSIFEAMNYALF----- 48 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +D + R T EFE+ G+ Y+ R + + N Sbjct: 49 -APRRIKLSDAIKRGTDFFSISFEFEINGKRYKVIR----GRGKKNIN--------YLYE 95 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + K ++ + + +D F+ ++ + QG ++ + P ER +L+ +L G E Sbjct: 96 NDKPYSENNDEVNNKIKEILNMDDEVFSNAIYIKQGDISSLIQITPAERKKLIGKLLGIE 155 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLL---TPEQVQSLTASLQVLTDEEKQLIT 237 Y Q+ + K+ +L+K++ + + +++ + ++L + + + Sbjct: 156 RYEQVWDKLKTPLKNMELDLKKIEGELIQKEDINTNINNLKENMEKNSKILKELQDKFNH 215 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP--- 294 A + + L + ++ + E + Q L++ E ++ + L A N Sbjct: 216 AVELRDRKEKLLKKWEKKEIENNNLQNNLKELKYGVETSENNIKILISDLGAINTHNNIL 275 Query: 295 -----HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 ++ + E L + ++ + L ++ K E+ ++ N Sbjct: 276 NSNYLNYSKYKEIENKLKKLANELLQYKKYYDKFNELNGEMKG-LEKTIKEIDKKLIDKN 334 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA- 408 + + Q N+ + + + L ++LT E L Sbjct: 335 PKNKSNSEIEQEINDINKELNKLDDILNKLKDLELLNKELTKIENSKKELNKNKENYLKY 394 Query: 409 ----DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + + E +++ L QI + ++ QL+ +++ + N Sbjct: 395 LELSKKSKELNNKLMELSGIKEKENDLKQQIKSTEYKIKQLKQDLKDFNNIDIEINKEKE 454 Query: 465 EMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ--AGQPCPLCGSTSHPAVEAYQA 522 + + + I + A I + +L+ CP+C S Sbjct: 455 IKTKYEDIVNKIDLLKEKIAQNNAEINQTKDAIEKLKGTTEDKCPVCQSN-------IDG 507 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 L+ + L E K+ + + + K ++ ++ +L+ L ++ Sbjct: 508 LKKQELLKQYNQLIEERKQKSNKLQIKYNKYLSEKKDIKDKLDKINNLKNKYGQLKEKNN 567 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + N ++ +D+ +E+ + + + + ++ + ++ + ++ Sbjct: 568 NLIEEENKLIKLNNDLNVIGKDLEEYNKIIENIKTKENKLKELEQYYKKYEYCENFLKDS 627 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L L + + +S L T + EL + +L ++ Sbjct: 628 NEQELVDNKNKLLDIIGNNTNKSILNT-----------KKELNNKVGELNELLNLIRNKE 676 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 Q+ + + + +V L ++ + +++ + + + + Sbjct: 677 QNMKKLNVVNKEIDNLKDKVATN-SQLEIEKNSNEKELIKYKDGYNQYNDSYAVLKNYAD 735 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 A+ E+ ++ +L + N + ++ + Q+ ++ + Sbjct: 736 -------KYAVSIEEIRNKVNELLKKENNNLNNLNNEIQNIKLSIEKL-QYNIEEFEDIK 787 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 +I ++ + ++ + + T+ + L + + +Q + L + Q+ + + Sbjct: 788 KDYNKINNKVNEINEDIIKLDTTIKNENKLLSEFENKLKQLEKLESKKEQLNNAIHNLAN 847 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 + + SK G F+++ + + + N+ Y + ++ V D Sbjct: 848 IREAVFSKNG--FQQYLRQKYIPIIQRHTNEVFNEFELPYS-HIEIKNDYDITVDDN--- 901 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 +TLSGGE V+LA+ + ++ V ++ + LDE LD L Sbjct: 902 ----PVKTLSGGEQIAVALAIRIGIAKAVCS--DLNCIILDEPTAFLDENRRHNLLRVFR 955 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 + + I VISH +++ I V+K G + Sbjct: 956 NIKSLS-QIFVISHHSELEQVANNTITVEKNMGNSIIR 992 >UniRef50_C0W8J1 Exonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8J1_9ACTO Length = 1070 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 193/1090 (17%), Positives = 385/1090 (35%), Gaps = 66/1090 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + + G IDF R FA++G F +TGPTGAGKTT++DAI ALY + Sbjct: 1 MRLHRLTMTAVGPYPGTEVIDFDR--FAASGRFLLTGPTGAGKTTIIDAIVFALYGDVAG 58 Query: 61 LSNVSQSQ-NDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVEL 116 + S+ + + E + E+ F YR + R + G Q +++ Sbjct: 59 DKDSSKDRIRSRLAGPGTETVVELVFSTSAGTYRVRRTPAYERLKLRGSGTTTQKASLKV 118 Query: 117 ARCAD-----GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAE 171 R D + A + + GL +FT++++L QG+FA FL A ER + Sbjct: 119 WRLTDPAGRPSQDAALRPDEAGAELLRAIGLSREQFTQTIVLPQGKFATFLRASSDERHK 178 Query: 172 LLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDE 231 LL ++ GT ++ + E+ + Q+ L E + + + Sbjct: 179 LLRDVFGT----RVYDELQEELRRRSLAARGQVEQSHQRLLAAAEAFAEVISPEEADQHS 234 Query: 232 EKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLA---QP 288 ++ + Q ++ + +E + + L++A+ Q + ++ + Q Sbjct: 235 PERTASQQAGASEASPSPSAPEEAEALHPTAAERLRRAVEAATPGQEVIIEITSSVTGQT 294 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 A LR + +A R +++ L +A R ++ + A Q + Sbjct: 295 AARLREAQDEVACAQRRRETARGALDKAQA-LTELLAQRRALLQAHDELEAGAQDAALTA 353 Query: 349 NTWLQEHDRF------RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 T + + +Q+ + L A + Sbjct: 354 RTLELAQRAASVAVMVERARKDAEAASQVLTQEPGQQPQDEATTVLLAQALSECEQALGT 413 Query: 403 TLTLTADEVATA---LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQR 459 A Q L HL A + Q LA+ + V+ + Sbjct: 414 VRDWDQVAHAPQPGTALQLPASDRLLAHLEAQAREQRDQAAALAEAEATESQVSGRREHL 473 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 +A E ++ ++ Q + ++ ++ +++ L A Q Q P L + A Sbjct: 474 DALRQEQERQSEQTEQTRQALASLPQRGEQLRALLATAHQAQERLPD-LRSAYEAAGRRA 532 Query: 520 YQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ 579 A + + L ++ +E + Q A+ + SL + Sbjct: 533 EAAEQAQPVSTALAQARECAEQARKEADAVEKQAHALRS--AWINATSASLVGELSPGQP 590 Query: 580 QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQI 639 ++ + + D + R + ++ A ++ Q Sbjct: 591 CPVCGSSEHPHPASAVAEPVSRADLDAADQSSARARQNLEAARAEVTALQARLTQLSAAA 650 Query: 640 E-----QRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 E Q L T + + + + +L+ + Sbjct: 651 EGRSPEQAAAQLTAARTALTGAQEEAEPRTRLQEELDSLTARESELRQQLSEHKEAAAAT 710 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA---- 750 L + Q+ + + + V + L + + + +++ Sbjct: 711 AATLASEQQALDRDLEQIATARGTYTTVASRRAEL-GRLAQVAEALTAHWRTIGALVQTS 769 Query: 751 ---QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETL 807 Q + + F + AA E + L L + + + + + + + Sbjct: 770 RSSQQDLAGEMTKAGFSSRTGLEAARRSEAEVKHLSSLVRERDAEAARVRAGLARPE--- 826 Query: 808 AQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLM 867 +EQ + LA+ Q + + ++ Q + ++ + Sbjct: 827 ------ISMLTGQEEPGLEQARTVLAEAEQAWQSAVSQHASVQAQAESVRTRARRLRQAA 880 Query: 868 QQIAQMTQQVEDWGYLNSLIGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLL 924 + + ++ +L + + + +++ AN +L + G RY L Sbjct: 881 ADLTTVVGDNAALLHVAALAAGENPEATPLATWVLTERFKDVLTFANHRLETMSGGRYEL 940 Query: 925 QRKASE-------ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHK 974 + E L + V+D + RD RTLSGGE+F VSLALALAL+D+V S Sbjct: 941 IQVDEEKNSARRRGLGMGVLDRLGGERTRDPRTLSGGETFYVSLALALALADVVATESGG 1000 Query: 975 TRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN 1034 +++LF+DEGFG+LD +TL L+ L L G+T+G++SHVE ++ +IP Q++V Sbjct: 1001 ILMETLFVDEGFGSLDPQTLQDVLNELGQLQQGGRTVGIVSHVEELRRQIPDQVRVTATP 1060 Query: 1035 GLGYSKLEST 1044 + ++ Sbjct: 1061 EGSRLTVVAS 1070 >UniRef50_D1PAG1 Putative exonuclease SbcC n=1 Tax=Prevotella copri DSM 18205 RepID=D1PAG1_9BACT Length = 1151 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 255/1155 (22%), Positives = 440/1155 (38%), Gaps = 118/1155 (10%) Query: 1 MKILSLRLKNLNSL--KGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHET 58 MK L L + NL SL +G I+F + +F+I GPTG+GK+TLLDAICLALY+ Sbjct: 1 MKFLQLEILNLASLDKQGGEVINFEEGALGESTIFSIVGPTGSGKSTLLDAICLALYNRA 60 Query: 59 PRLSNVSQSQ-----------------------NDLMTRDTAECLAEVEF-EVKGEAYRA 94 PR + +++TR E +++ F G YRA Sbjct: 61 PRYPRKKGDKNQNIEIFGAADASESNRLAPTDSRNILTRGKKEGYSKLTFLANNGSIYRA 120 Query: 95 FWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLS 154 W R + + + L + + + GLDY +F R++L++ Sbjct: 121 EWHVRFQRVRYE----NAKTALYKITRNGEEITEETADWNELPNIIGLDYDQFLRTVLIA 176 Query: 155 QGQFAAFLNAKPKERAELLEELTGTEI-YGQISAMVFEQHKSARTELEKLQAQASGVTL- 212 QG FA FL AK ER ELLE+L G E Y I+ + + A ++ A V Sbjct: 177 QGSFANFLTAKENERYELLEKLIGCEETYTNIATEIKKAKDQATDAYNQMAASVEAVKQN 236 Query: 213 -LTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALA 271 L E++ L + L EK+L + Q + L W D+ ++ + Q ++QA Sbjct: 237 LLNDEELAQLKEEIARLEKAEKELDSQLQAISKDLQWFEENDKQIKQITICQTDMEQAAD 296 Query: 272 EEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIR 331 + Q Q+ L L + + + + ++ + I + ++S + + Sbjct: 297 AIKAMQAQILRLQLHDEVQPAVNLLQEVERQTQSIHEQEENILKAEGNIKSQESAISESE 356 Query: 332 HHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTH 391 A + + Q+ L L R + ++ E ++ Q Sbjct: 357 KTLASLKEAVSKAQEQLEKALPVIAEARALKAKMEAAMPNLKEKKEALELAQKENQTAQK 416 Query: 392 AEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ--KRLAQLQVAI 449 ++ T E +Q L +R I Sbjct: 417 DVEENARNIQKWEAETEKANLALKTTQEEIAKQKQVLHEATQAAEQAWETERNKTAGQNI 476 Query: 450 QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI------------------- 490 + + ++ L +++Q K K + E RI Sbjct: 477 EELQSHKSAAEKKLQDVQQAIKVVAHLDTATKEKQKNEERILVLGKRNAEIDAALGKLTI 536 Query: 491 -------------------KTLEAQRAQLQAGQPCPLCGSTSHP---------------- 515 + E RA L G+PCPLCGST+HP Sbjct: 537 EALTQETLTLRNAYTLMVSEKWEIHRANLTEGKPCPLCGSTTHPYHTDNRQFEEATTELS 596 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 + + + Q L E K+ E TL+ Q + +++++ E + ++L Sbjct: 597 QLLKVKENLLKLQQKEEKVLSGERKQNDGEVQTLQKQQEKLSEEIATYEEDWKALIAQYP 656 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQY 635 + + + + L I D L ++ ++++ L+Q + + A + Sbjct: 657 KIPKAEAELKSLLPIYENKAKDASSKLSLFNKIQKEIERLTQLKDKAVKDEAAYESKAST 716 Query: 636 QQQIEQRQQL--LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 Q Q ALT +++S + Q+W + E+ Q + QQ Sbjct: 717 IQNKAQESTSTCATKLAEQKALTSNLISQQKSKEEAYVKALQAWNSAKKEMEEWQAQYQQ 776 Query: 694 L------TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 + + L + + EN ++ + QT+ Q+ ++L Sbjct: 777 ILNGEEPDAAEQRLTAAKDEATKAADKQNENINKLKAELANSKGSHQTMLSQNKTMKENL 836 Query: 748 QKAQAQFDTALQASVFDDQQAFLAALMDEQT----------------LTQLEQLKQNLEN 791 + + D ++ ++ + E+ + ++ ++ Sbjct: 837 LAKEKELDLWIEEYNKQLEEKSIEGKDSEEEGIEERSIEPSLIDRNTIREMLHSAEDWNA 896 Query: 792 QRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRE--NTTSQGEI 849 RR+ A T A +Q L Q + L Q+ +E Sbjct: 897 IRREKDEKEKAVASTTALYQSAEKAHQQHLEHQPAQTRDALLAIQQEYQERSQRNELIAA 956 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 +++ + +Q + + +TQ+ +DW + IG +G RK AQ TL L+ Sbjct: 957 NARMQNHQEAVKQLGDKAEALNLVTQEKDDWTAITDAIG-ADGKTLRKIAQCYTLSFLIA 1015 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 ANQ++ + + RY LQ + +L + V+D +AD +RDT +LSGGE+F+VSL LAL LS Sbjct: 1016 HANQEIRKFNSRYELQ-QVKHSLGIRVIDHDRADDIRDTTSLSGGETFIVSLGLALGLSA 1074 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALN-ASGKTIGVISHVEAMKERIPVQI 1028 L S ++LF+DEGFGTLD +TL T +D+L L + GK +GVISH + M ERI QI Sbjct: 1075 LSSRNISFENLFIDEGFGTLDPDTLATVIDSLAMLQSSQGKKVGVISHTDTMSERITTQI 1134 Query: 1029 KVKKINGLGYSKLES 1043 ++ K G S +E Sbjct: 1135 RIIKNGNSGSSHIEI 1149 >UniRef50_A0KMP6 Exonuclease SbcC n=2 Tax=Aeromonas RepID=A0KMP6_AERHH Length = 1251 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 287/1243 (23%), Positives = 478/1243 (38%), Gaps = 207/1243 (16%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NL SL G++ IDF + GLFAITG TGAGK+TLLDAICLALY E PR Sbjct: 1 MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR 60 Query: 61 LSNVSQSQ-----------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRAR 102 ++ +++R A AEV+F G + A W+ RAR Sbjct: 61 FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 N+ +G Q L A G++ + ++ + L GL + +F R+++L QG+FAAFL Sbjct: 121 NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 + ER+ LLE +TGTE+Y IS E+ + + +L + + V L+ + Sbjct: 181 KSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAIGQRLGDVALMDEATREQWV 240 Query: 223 ASLQVLTDEEKQLI---------------------------------------------- 236 + L K Sbjct: 241 SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEAAHGAAAPEREE 300 Query: 237 -TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPAR----- 290 +Q Q + L E ++++AL + E K + Q +L + Sbjct: 301 FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEQTQQSALTEQQLLAKKI 360 Query: 291 -------NLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 L+P +R E + +QQ++++ ++ ++ +Q +++Q Sbjct: 361 AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQRQQVEQ 420 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 + W + ++ W+ + E + QQ LT E KL AL + Sbjct: 421 LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ 480 Query: 404 LTLTADEVA-------------------------------TALAQHAEQRPLRQHLVALH 432 L + EQ + L+ L Sbjct: 481 HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLVKAQEQWQGQTEQLGQLRQLLELA 540 Query: 433 GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKT 492 ++ +LQ I + Q + +E+ + Q + + EQ I + Sbjct: 541 DYGHNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS 600 Query: 493 LEAQRAQLQAGQPCPLCGSTSHPAVEAYQA-----------------------LEPGVNQ 529 E R L+ G+PCPLCG+ HP ++ + + Sbjct: 601 FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE 660 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRD------------ENEAQSLRQDEQAL 577 S L ++ + L + + +T++ Q+ + L Sbjct: 661 SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQRPIEWNELMSTL 720 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS---------------QRHELQ 622 + Q++ L + Q L + Q +QL L+ QR L+ Sbjct: 721 LGRGQSLEQGLARSQQQLREAQQGQQQLQAVRQQLSQLTSQHQQFEQQWQEADRQRIALE 780 Query: 623 GQIAAHNQQIIQYQQQIEQRQQLLLTT--------------------------------- 649 G++ A +Q +Q++EQ L Sbjct: 781 GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE 840 Query: 650 --LTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI----------QQLTPI 697 A P +E+ L T+++ ++ E + + +++ + Sbjct: 841 RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIAQV 900 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 Q + E + R + E+ L ++ L+Q+ ++++ ++ ++ Sbjct: 901 EIRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH 960 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR--- 814 + + M L Q LE+ R +A+T +T+ LA + R Sbjct: 961 ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY 1020 Query: 815 -PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + +++ L R + + L Q + +L +++A Sbjct: 1021 REHHPELAALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGSLQEELAAQ 1080 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + W L LIGS G K R FAQ LTL+ L+ AN QL L RY L+R L Sbjct: 1081 QAVADHWQRLCDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA 1140 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 ++VVD D VR +LSGGESFLVSLALALALS L S +T+++SLF+DEGFGTLD ++ Sbjct: 1141 LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS 1200 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 LD AL +LD+L A+G+ IGVISHV+ + ERI VQ++V+ + G Sbjct: 1201 LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGG 1243 >UniRef50_D2NSE4 ATPase involved in DNA repair n=2 Tax=Rothia mucilaginosa RepID=D2NSE4_9MICC Length = 1097 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 208/1103 (18%), Positives = 382/1103 (34%), Gaps = 66/1103 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M + SL + + +I+F + G+F + GPTGAGKTT+LDAIC ALY ET Sbjct: 1 MILHSLEFEAFMAYPKRQEINFD--TLNNAGVFLLNGPTGAGKTTILDAICYALYGETSS 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVEL---- 116 ++ + + ++ + G+ R + + G + E Sbjct: 59 DRESAKLHSTYAAHSGTKPRVLLDVTLHGKRLRIDRTPAYNKPITRGARKGQMREESAKA 118 Query: 117 -----------ARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 A ++ V + A T L +F + +LL QGQFA FL +K Sbjct: 119 TLAELAPGADPADEKAWTPISSSVAEVNRTIAERTHLTKEQFLKVVLLPQGQFAQFLKSK 178 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 PKER ELL+++ E Y Q+ A + E+ K+A+ E+ + + G ++ +L A L Sbjct: 179 PKERKELLKKMFPVEHYEQLFAALTEEAKTAQQEVAQDENTQRGYLERARVEMLALQALL 238 Query: 226 QVLTDEEKQLITAQQQEQQ--SLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 V + + + + A A + + + Sbjct: 239 DVADPDAEDAAGEGSATEDPVEAETSEQLTAESVTAENVTAETLDAWVAGGVERARETSA 298 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 Q + L +R A A ++ E + L H A++ Q Sbjct: 299 REKQEQQRLTDEADRNTRLLAERAQLQADWREYEQLCERRTRLTVRADEHKAQREELAQA 358 Query: 344 QQQS--LNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 + + + Q H + A S L + + + + Sbjct: 359 RAAAPLHAQYAQVHAESQALAARQQEQAACASALDETGRALLAALRDEETSAEVIFPEET 418 Query: 402 ITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNA 461 L E A Q + L Q+ ++ A L + Q++ + Sbjct: 419 TFAALPDFEPAEQETQLEALLDTLRALQKKDAQLTDEEAAAAALLKQANALEQDRARAEK 478 Query: 462 ALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 L+++ + ++ ++LA T E+ L + Q + A A Sbjct: 479 RLSDLTAQAEQLAEELAGYSTADEERTLAAHLVTEAQQKHDAAQQMQQKLDAASAAVAAA 538 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + + + + + ++ + + + + + Sbjct: 539 QKQSKRTATAEQKAQEKWQASAQQALAATEEFKNLQVLRLAQASSLLARELKDGEPCAVC 598 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 +V + + + D ER+ + Q + + + + + Sbjct: 599 GSVEHPAPARIAEGEQLVERADLDAAKEREDKAHKQARTHELAKDRATKAHQEASEALAA 658 Query: 642 RQQLLLTTLTG----YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 + T + T Q ++ LA Q + ++ ++ Q+ Sbjct: 659 ARTQYETLVAQGECDVEQTAAQLQHAQTRLAQAQSRVTARDGVLVKVERVRAEQQKAQEA 718 Query: 698 LETLPQSDELPHCEETVVL-------------------ENWRQVHEQCLALHSQQQTLQQ 738 L T+ + + E A H + Sbjct: 719 LRTIESAAVEAQTRHRDAAARCEAAAAQLAPARAAVGFAQRVEAVEGYRAAHQRLARAVL 778 Query: 739 QDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT 798 A + A AQ + L S F+ + AA+ + + LEQ E + + Sbjct: 779 LLGQARERHALAAAQAERLLAESSFESAELVQAAVRTPERVDALEQAVAAYELEHAR--- 835 Query: 799 LVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDAD 858 L+ R G ++ +++++ Q T +GE L+ Sbjct: 836 LLEGFGREAIVAVAARAAAGEQAPDDLQGVREQVEQLRAAAHRLTLREGERESMLRSLHV 895 Query: 859 NRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR------KFAQGLTLDNLVHLAN 912 R + + AQ + + L + + + G + ++H A+ Sbjct: 896 LRGEYAAFRAKTAQRYDRAQMLANLAAAARGDTLGGYEHQVDLVSYVLGAEFERILHSAS 955 Query: 913 QQLTRLH-GRYLLQR--------KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLAL 963 L R+ GRY + ++ L +E+ DTW R+ +LSGGESFL SL+L Sbjct: 956 LHLDRMSEGRYGMVFSDHRAKGSRSGGGLNLEITDTWTG-EPREASSLSGGESFLASLSL 1014 Query: 964 ALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020 AL L+++V +D+LF+DEGFGTLD+ETLD + +++L SG+TIG+ISHVE M Sbjct: 1015 ALGLAEVVQANNGGIELDTLFIDEGFGTLDAETLDMVMGTIESLRDSGRTIGLISHVEEM 1074 Query: 1021 KERIPVQIKVKKINGLGYSKLES 1043 K RIP QI V+K ++ S Sbjct: 1075 KNRIPAQIVVEKGQNGSSVRVNS 1097 >UniRef50_C9L5R9 Putative exonuclease SbcC n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5R9_RUMHA Length = 1076 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 216/1094 (19%), Positives = 431/1094 (39%), Gaps = 75/1094 (6%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 +++K LNS +IDF + S GLF I GPTG+GKT++LD + LALY T R S Sbjct: 1 MKMKGLNSFLEVQEIDFEK--LTSQGLFGIFGPTGSGKTSILDGMTLALYGTTSRNST-- 56 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGK-- 123 + + +T + E F ++ + + + DG ++ + A + + Sbjct: 57 ----NYINVNTDKAFVEYIFSIQEKQQHKYLVARSFKRTKDGGIRSDSAKFADITEEEPV 112 Query: 124 ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIY- 182 ILAD+V + GL F R+++L QG+F+ FL + ER ++LE L E Y Sbjct: 113 ILADRVGTVNAKCQEVLGLSKDDFFRTVVLPQGKFSEFLKLEGMERNKILERLFHLEKYG 172 Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 +++ +V EQ + ++ + S +T E +Q+L L + A ++ Sbjct: 173 ERLAFLVKEQAGQWEGKRKEQEGALSRYEAVTTEAIQALEQKETELEKNLAKKEEALKKM 232 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 +++L Q L +E + E++ L A+ A L P++ E Sbjct: 233 RKNLEDSKGQILLWEEYDAVCEKENSLAKEQDDITALQENLKKAEIANGLFPYFSDYQES 292 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 A Q+ + + K Q Q+ L + Sbjct: 293 IAKEKSYTQKAAALTELWTEKRKSFTFTQLELQKAEERKQAQKPVLEQRRNNLLEAVKLA 352 Query: 363 NEPAGWRAQFSQQTSDREHLRQ----WQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 E + +F Q +RE + + Q+++ Q ++A + + V T ++ Sbjct: 353 EERDIQKNRFHTQKKNREEITKKLLDAQEKMKALLQDIDARKLQKTAMQQEIVKTTISAE 412 Query: 419 AEQ------------------------------RPLRQHLVALHGQIVPQQKRLAQLQVA 448 +Q + +R + +++ A+ Sbjct: 413 IQQMIMNGFQKTERLNQQKCRRTAIEEGLKEDIKNIRNKEREKQELLQRLKEKEAEKAEY 472 Query: 449 IQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL 508 +QN + Q ++ A L+ ++ + ++ K EQ A L+ G PCP+ Sbjct: 473 LQNAWENQKKKCAKLSAEIEKAQVNQIEIQGKKETQEQLYMENMAAILAASLEDGMPCPV 532 Query: 509 CGSTSHPAVEAY-QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEA 567 CGS H + Q + Q + ALE E++ + E A LR QL + + + Sbjct: 533 CGSIHHEKPQTLRQKEDIQALQKQKEALEEEIQAIYETLAGLRTQLQQEQQITFENLPIS 592 Query: 568 QSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE------- 620 L ++ Q L + +N + + + +A+++ Q + + Sbjct: 593 PKLTEELQKLQTEAAKKETEINGLQKRYTERKQEWEAENKEILQKENELEIQKQTAMVED 652 Query: 621 ---LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLAT----RQQE 673 + N++ + Q+ +E +Q L + E ++ ++Q Sbjct: 653 FQIAYEALQEKNRKREELQKLLETLEQKLDARIKNREKGEGIIQELKAQQTEASFLQKQA 712 Query: 674 AQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ 733 + + + ++ + + L+ S + + Q + + Q Sbjct: 713 EEKLLEIKEKILEKAQTEENILEKLKETEASIAALEKQYETSKALFEQASTEEQEVARQL 772 Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 ++ + + + A +++ ++ +EQ L+Q+ + +N + ++ Sbjct: 773 AAVKALAEASQKDSIQKYALLQEKMKSCSVTEETYIAKYHTEEQKLSQMREKLENFQKEK 832 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQL 853 + Q + Q + L + + + L +++E+ + E S G +R++L Sbjct: 833 IRVQEQLLQIKKKLKSKRMEQGEFAL--------LEKEVQTLETETTEENKSFGAVRKEL 884 Query: 854 KQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQ 913 +Q ++++ + + ++ +++ L L G +F ++ L+++ A+ Sbjct: 885 EQMKTAWKEKENVCVLLEKIHHKLDILSELEGLF---RGKRFVEYISRYYLEHIAREADT 941 Query: 914 QLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS- 972 L + G + E + D A R TLSGGE+F+ SLALALALS + Sbjct: 942 GLKEMTGN-TYGLEIDENTAFIIRDYKNGGASRPASTLSGGETFMASLALALALSSQIQM 1000 Query: 973 -HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 ++ FLDEGFGTLD L+ ++AL+ + +++GVI+HVE +K RIPV + ++ Sbjct: 1001 KGAAPLELFFLDEGFGTLDENCLEVVMEALEKIRNKKRSVGVITHVEEIKNRIPVHLLIE 1060 Query: 1032 KIN-GLGYSKLEST 1044 G G SK+ Sbjct: 1061 PAKAGEGGSKISIE 1074 >UniRef50_A9WFV4 SMC domain protein n=3 Tax=Chloroflexus RepID=A9WFV4_CHLAA Length = 1032 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 205/1067 (19%), Positives = 387/1067 (36%), Gaps = 59/1067 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L L L+N + D R + ++G GAGK+TLLDAI AL+ E R Sbjct: 1 MIPLQLALRNFMCYRATENGDPLRLDLDGLHVLCLSGENGAGKSTLLDAITWALWGEARR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +DL+T+ E + E+ F + G YR + R R+ G + Sbjct: 61 PD------DDLITQGETEMMVELVFALDGRKYRVIRQRQRGRSSGRGTGAGKTWLDLQQF 114 Query: 121 DGKIL----ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 DG + +++ L + Y F + L QG+ F + P ER E+L E+ Sbjct: 115 DGTTWRPIGENTIRETQRKITELLRMSYTTFVNASFLLQGRADEFTSKTPAERKEVLAEI 174 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLT------PEQVQSLTASLQVLTD 230 Y ++ E+ + +L +++ Q + + + V L Sbjct: 175 LDLAEYAELERRARERVRLLEADLIRVRGQLETLQPIANQVPFWQQAVAEAEQRQHTLQQ 234 Query: 231 EEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEE-EKAQPQLAALSLAQPA 289 + L Q + L L ++ Q+E R L + + + A ++ A+ Sbjct: 235 QRTALEAEFTQASEKLRHLEQEAHRQREVQNRIAILTGEIQRYSNELRELNARIAQAEQT 294 Query: 290 RNLRPHWE----RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 RP E + A L + Q + + L+ ++ + L Sbjct: 295 IAQRPLIEAGLAELHAARADLERLEQLRTRYDELMARKRELQQELKAELNLLNERLSHAI 354 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 Q L+ E R A R + + E L Q Q Q T EQ LN + Sbjct: 355 QQLDRLYAEAQRLVGLQQRVAAIRQRLRELAPVHERLVQCQHQRTALEQHLNHI----RD 410 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 L + ++ L+ L H ++ ++L+ ++ + Q + Sbjct: 411 LVMRQRLLQNQLEQQRNTLQSELNRSHQELARLDRQLSDVETWRNALRAAQDAQARVQIL 470 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEP 525 ++ + Q+ + + A LQ Q G P + L Sbjct: 471 EAEQLNRRQQEQVVLDRLSAARAEAAQARRDIETLQTNQALLATGKGECPVCRRH--LAA 528 Query: 526 GVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVT 585 E+++L + + + A ++L++ + S Q+ L QQ Sbjct: 529 NEADHVYAHYRQELERLQAQETQAKAAIQAAEQELKQIRSTLTSTEQELTRLRQQAAT-- 586 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + L+ W +D+ +++ L+ + A ++ +E Sbjct: 587 --IESLHHQLNQAATWQTERDQLAQRIATLTGQLTTGSINPAVQAELDTLITDLE----- 639 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 + + L E + +Q+ E + L+ + +E + + Sbjct: 640 ----------AAGDIESVQRDLRMLNDEMMTLEQQLREHSRLEGELSTCQNDIERIEHAL 689 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 E V E RQ+ E + Q L + + + + AL S+ Sbjct: 690 RDLPAAEATVAELQRQIAENDFGHEIRVAGRQVVAELESLNYRPEDLEATRALVRSLTRW 749 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 +QA L+ EQ +L++ + A+ A+ H+ + TV Sbjct: 750 EQAERDLLLAEQRYATDLKLREQTQQLCDHAERERQTL-HAEAEALAHQLRVLPTVQATV 808 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 Q++Q+L+ Q L+ E + +Q + ++L Q Q++++ + L Sbjct: 809 NQVKQQLSANEQALQAAGRDLAEKQAYYRQAESAAAEVESLQTQERQLSERTALFAELAE 868 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-----RYLLQRKASEALEVEVVDTW 940 G + + L AN+ L RL R+ +QR + VE ++ Sbjct: 869 AFG---KKGVQAMLIETAIPQLEDEANRLLARLTDGQMHLRFEMQRDTKKGDTVETLEVR 925 Query: 941 QADA--VRDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSETLDT 996 ADA RD SGGE+ V+ A+ +ALS L++H R+++L +DEGFG LD++ + Sbjct: 926 IADALGTRDYAAFSGGEAMRVNFAIRMALSRLLAHRAGARLETLVIDEGFGVLDADGRER 985 Query: 997 ALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 ++A+ A+ I VI+H++ +K+R P ++++K +L Sbjct: 986 MVEAITAVQRDFARIIVITHIDDLKDRFPATLEIRKTPLGSRWELRG 1032 >UniRef50_C7P7E8 SMC domain protein n=3 Tax=Methanocaldococcus RepID=C7P7E8_METFA Length = 1007 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 147/1058 (13%), Positives = 392/1058 (37%), Gaps = 71/1058 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I S+ + N S KI F ++G+ AI G G+GK+++ +A+ AL+ Sbjct: 1 MIINSITINNFKSHVN-TKITF------NDGIIAIIGENGSGKSSIFEAMFFALFGADA- 52 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L + + ++++T+ E++FEV G +Y+ + R Sbjct: 53 LRRMGLTYDEIITKGKKAMSVELDFEVNGNSYKVVREYD------------GRSSAKLYK 100 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + ++ A V + + + G+D F S+ + QG+ A LN P +R E++ +L G + Sbjct: 101 NNELYAKTVNEVNRAISEILGVDKDMFLNSIYIKQGEIANLLNLPPADRKEVIGKLLGID 160 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVT------LLTPEQVQSLTASLQVLTDEEKQ 234 + + + + R +L++++ S Q+ L+ + + Sbjct: 161 DFEKCYQKMRDVINEYRNQLKEVEVNLSYKEKFEKDLKEKENQLAEKEKELERIKANIDK 220 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALA-EEEKAQPQLAALSLAQPARNLR 293 + T + +++ + L ++ + + ++AL E+ K + L A + Sbjct: 221 IKTEYETAKKNFVEWKEKKSLYEKLINKLEEREKALELEKNKLKNLKYDLDEVLKANEIL 280 Query: 294 PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQ--SLNTW 351 + +L + ++IE LQ + ++++ ++ + + Sbjct: 281 KSHKGEYGEYKSLTNRIKEIERRLRDLQPAYEEYIKLSKTLENIEKDIKELKEFVDKSKY 340 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA-----ITLTL 406 D + + + L Q+L E+ Sbjct: 341 KDRLDELNEILESIKKRIEEVEKTAELLGELEILSQKLNEIEKYKKIANECKKYYEEYLK 400 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT-QEQTQRNAALNE 465 +++ + E L Q+ ++ I + ++ + + +E + + + Sbjct: 401 LEEKINEYNKLNLEYTKLLQNKESIEENIKNLNCEIENIEKELNGINIEEIKKSLEEIEK 460 Query: 466 MRQRYKEKTQQLADVKTIC-EQEARIKTLEAQRAQLQAGQ-PCPLCGSTSHPAVEAYQAL 523 ++ + ++ ++K E I L+ +L+ + CPLC + P E + Sbjct: 461 KKEELSQLQKEKEELKQKIGEINNEINRLKKILDELKDVEGKCPLCKT---PIDENKKLD 517 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 ++S+L NE++++ + + ++D I ++ + E + + + ++ + Sbjct: 518 LINSHKSQLDNKYNELEEIKRKIKEIENEIDKINNEIAK-EKQFREIETKYYEKKKRLED 576 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 +T +N + L I+ L + + + + + + ++ ++ + +Y + Sbjct: 577 LTLKMNGLKKELIMIENKLSSYIVNGKPINEILEEYK--TKLNEIRDKYNEYISA-KNYL 633 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + +E + + ++E + + + E+T L N+I++L Sbjct: 634 DSVDEENLRRNFEDIKEKVKGWFKEKCKEEIKKLRDEEKEITYLINKIEELKKKENEFKN 693 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + + + E + ++E + + L+ + A+ + + Sbjct: 694 VENKMLLKLGMYKE-YLSLNEALNDCRKRVEELENIYKIC----NSAEITLNNIKRKYGK 748 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 +D + ++ + E + + + + + + L + + ++ + Sbjct: 749 EDIENYINNKILE------------VNEKIKDIKERIDYINQKLNEI-NYSEEEFKKIEE 795 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 E+ Q++L + + + +R ++ ++ L ++ ++ + ++ + Sbjct: 796 EFEKKQEKLKNAEIEKGKIESEIKYLRDDIETLNLKLKELSDLEKEKEKLIKFIDYLNKV 855 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQAD 943 S+ G D F+K+ + + + N+ Y ++E+ Sbjct: 856 RSVFG---KDGFQKYLRKIYTPLIQKYLNEAFNEFDLPYSFVELTE---DLEIKLHSPTG 909 Query: 944 AVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDA 1003 + LSGGE V+L+L LA+++ + +++ + LDE LD + Sbjct: 910 VL-TIDNLSGGEQIAVALSLRLAIANALIGN-KVECIILDEPTVYLDENRRAKLAEIFRK 967 Query: 1004 LNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 +N+ + I +I+H ++E + V K G+ K+ Sbjct: 968 INSVPQMI-IITHHRELEEVADTIVNVTKERGVSKVKI 1004 >UniRef50_C5NXT7 Nuclease sbcCD subunit C n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT7_9BACL Length = 1008 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 185/1070 (17%), Positives = 408/1070 (38%), Gaps = 90/1070 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK + L LK K E + + +F ITG TG+GK+TL DAI ALY++T Sbjct: 1 MKPIRLELKEFGPYKNEII---EWDKIINEPIFLITGKTGSGKSTLFDAITYALYNKTTG 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +++ S D + +FE+ G+ YR + + + NL +V L + Sbjct: 58 GKDIA-SLRTKTALDKDKTQVNFDFELSGKKYRIERTLAYLKA-GNKNLTSGKVALMQYN 115 Query: 121 DG--KILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 DG ++LA K ++ E L GLD +F + ++L QG+F FL +K E+ E L L Sbjct: 116 DGKLEVLATKEQEVKEKVEELIGLDDKQFCQIIILPQGKFKEFLLSKSSEKKETLRSLFN 175 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T Y + + EQ K + ++ + + + + + E+ L Sbjct: 176 TYFYQKFVEQLQEQAKKIDSSHKQKEKELITRFEQFDIEEELTKFEYLKDENFEEILGII 235 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 QE+ N +L++ S+ ++ + +K + ++ R Sbjct: 236 NSQEETVKNEKKELLKLERSFSKEKEKFIELSKLNDKFTQLKNNKLELEELSKKEDYYSR 295 Query: 299 IAEHSAALAHIRQ------QIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL 352 + L +++ + + T+ L ++ + K +L ++ Sbjct: 296 LKLEVEKLKELQKSKDKIIEYASLLTKKMKLKKLEEALLNEEDKYKLDLDTNKKLALELN 355 Query: 353 QEHDRFRQWNNEPAGWR------AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL 406 + + E ++ + ++ E + ++LT ++ L + Sbjct: 356 AQKTDIEELRKETIDYKFFYNNFNELILAKNNIEIYSKTLEELTLKKETYKELDSSLKVA 415 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 + ++ + + + + + +K L + + V + + ++ Sbjct: 416 KESYLEDIEEKNILDGSIGKLKLEVLKKEQDVEK-LEEYNNKLSEVNDKSVKLTVDKKQL 474 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 ++ EK + +V+ + + + + + L +L G CPLC + Sbjct: 475 KELELEKKKLEQEVELLNKNKEQ-EILNDFLLKLHEGDDCPLCKQKIEHLPDIPDLAVVD 533 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 ++I K LQ+ + L + ++ ++ Sbjct: 534 ---------------------------ESIEKSLQKVNKDIIQLETLIKKDEEEIGKIST 566 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 L ++ Q E E + + + ++ I +I ++IE+ +L Sbjct: 567 LLKNLGDTINFKAKEELLQLEDELKAENI-KLTDISKVIRTSEDKIKGLNREIEELSELF 625 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 L +++ E + + E + ++ Q+++++ L + Sbjct: 626 KNEDDIKQKHLEAKNKIEQFEKNVKVELDEFAGYYEKI---QSQVEEFDNTYNVLQNNSN 682 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 +T + + L + + + + + + Sbjct: 683 ELLVRKTKLETEQKNNKTNLLEVSKRIENIVDSFTNSKLN-------------------- 722 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 + ++ M E+ + +L NLE+ Q + ++ + +E Sbjct: 723 KYYVTLEMAEEDIEKL----NNLEDYESQINKFEDTKKIIVNSIEKLEEELKELNQPGLE 778 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 + QQ+L ++ + + +L+ + ++ + ++ + ++++ + + + Sbjct: 779 EEQQKLQDIESQVNDFIEKVVILNTRLENNKKLYKKIHSEYIELLESSKEIREIVAFSDV 838 Query: 887 IGSKEGDK--FRKFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKAS-------EALEVEV 936 + K ++ + QG LD ++ ++L ++ RY R+ + LE+E+ Sbjct: 839 VSGKTENRKSLETYVQGYYLDLILVAGTKRLLQMTNDRYRFIRRDEKSKGGGLQGLEIEI 898 Query: 937 VDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSET 993 D + ++ R +LSGGE FL SLALAL L++++ S ++++F+DEGFG+LD+ET Sbjct: 899 HDIYL-NSTRIISSLSGGELFLASLALALGLAEVIQNESGGISLETIFIDEGFGSLDAET 957 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 LD AL L L + G+ IG+ISHV +KERI +++V + K+ Sbjct: 958 LDIALTTLIDLQSYGRNIGIISHVSELKERIRPKVEVYSKDNYAKIKMTG 1007 >UniRef50_B7VP61 Nuclease sbcCD subunit C n=4 Tax=Vibrionales RepID=B7VP61_VIBSL Length = 1240 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 210/884 (23%), Positives = 375/884 (42%), Gaps = 13/884 (1%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL +NLNSLKG WK+DFT+ PFA NGLFAITGPTGAGKTT+LDAICLAL+H TPR Sbjct: 1 MKILSLEFENLNSLKGRWKLDFTQSPFAENGLFAITGPTGAGKTTILDAICLALFHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++++ N+LMTR T EC AE+EFEV+G+ YR+ + Q RAR + DG LQ P E A Sbjct: 61 LKSIAKGNNELMTRGTGECFAELEFEVQGKTYRSNFHQKRARGKHDGALQTPTCEFADAD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+L + K +L +TGLD+ RFT+S++LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 TDKVLETMLTKKTKLVEQVTGLDFSRFTKSIMLSQGEFAAFLNANANDRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 +Y IS +++ KS+ L L+A+A GV+LL+ EQ+Q LTA + L E+K+L + Sbjct: 181 VYSLISERIYDHFKSSEESLNHLKAKAEGVSLLSEEQIQELTAERETLEAEQKRLAEQLK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q L+W + +Q + + L+ A E ++ QP L L+ ++PA LRP + + Sbjct: 241 EWQAHLSWWKDVTKAEQTIATSEHDLKTAQDELDRNQPSLERLANSEPAEKLRPMHKGLK 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + ++ + L A + + + SA ++Q + + D R Sbjct: 301 RCEQEVNTTQAHLDNSSKLLAVRDAEKQDAQTKLTQSSAIVEQVKTEQQDQEKIIDLVRP 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 +N+ A + + + + L + Q + + L L H Sbjct: 361 LDNQIAVLKDKQTAAVNAANTLNEQHTQQRNQQIVLVQKIDALKQQ-DQLSTEYLNTHQT 419 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + L ++L ++ + Q + + Q + +A ++ + K Q + Sbjct: 420 DQHLEKYLGQWQAKVEQVRTLERQHAEQLNSAKQTLSAVDAQQTIIKSAQEAKATQDKTL 479 Query: 481 KTI-CEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEV 539 + + + + A + + + + LE + Sbjct: 480 SELVVLESSAKQQWVALQGNISEQVLNAQKDLLEYWNRNTHSLLEINRGFLNAQQQLHAK 539 Query: 540 KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD--D 597 + + L +L + L E ++ + L Q + + Sbjct: 540 TQAHQTNTQLVDKLSKEREVLVERYKEKETSLERLTRLIDQEGELAKYRAALESGSECPL 599 Query: 598 IQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 + ++ + L++Q+ ++ A ++ +++QQ++ ++ Sbjct: 600 CGSTDHSIEQSQDTANLVAQKETENLELTAIKKEGQEHRQQLDSLAPMIAALNDDIQRAQ 659 Query: 658 PQEDEEESWLA----TRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + + Q + EL L I+ T Q E+ + + Sbjct: 660 ADIQQAQLNWQGVVGKLQHSLSDFVGTAPELALLTINDLGNEAIVATFAQQCEVQLSQFS 719 Query: 714 VVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAAL 773 L+ Q+ + A +L+ A+ + + + ++Q A Sbjct: 720 QQLKALADAKAHYAEAEKQRLSASVMADKAQSNLELAEQRLADLNKQNHSTNEQVAQIAQ 779 Query: 774 MDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA 833 EQ L++ + + + + + I+++L Sbjct: 780 TKEQQWNALKESI-----VQTAIEAPELEHIDDWFTAKSQASSTWQQTKQQQADIEKQLI 834 Query: 834 QTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + +L+ + ++L + + +I+ ++ Sbjct: 835 TQNAELKTLDDKLSSVEKELATLTQQSESLVLELTRISAERTEL 878 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 260/976 (26%), Positives = 412/976 (42%), Gaps = 118/976 (12%) Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE 232 LE L +E ++ + + K E+ QA + L + + LT Sbjct: 280 LERLANSEPAEKLRP-MHKGLKRCEQEVNTTQAHLDNSSKLLAVRDAEKQDAQTKLTQSS 338 Query: 233 KQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNL 292 + + ++Q + L + + + A+ Q Q Sbjct: 339 AIVEQVKTEQQDQEKIIDLVRPLDNQIAVLKDKQTAAVNAANTLNEQHTQQRNQQIVLVQ 398 Query: 293 R-PHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTW 351 + ++ + S + Q + + L A +R + + +L +Q+L+ Sbjct: 399 KIDALKQQDQLSTEYLNTHQTDQHLEKYLGQWQAKVEQVRTLERQHAEQLNSAKQTLSAV 458 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV 411 + + A S+ +Q L ++ + Sbjct: 459 DAQQTIIKSAQEAKATQDKTLSELVVLESSAKQQWVALQG-------------NISEQVL 505 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 L+ ++ + Q++L A Q TQ + + + +RYK Sbjct: 506 NAQKDLLEYWNRNTHSLLEINRGFLNAQQQLHAKTQAHQTNTQLVDKLSKEREVLVERYK 565 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS- 530 EK L + + +QE L RA L++G CPLCGST H ++ + Sbjct: 566 EKETSLERLTRLIDQE---GELAKYRAALESGSECPLCGSTDHSIEQSQDTANLVAQKET 622 Query: 531 ---RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ--------------- 572 L A++ E ++ ++ +L + A+ +QR + + Q + Sbjct: 623 ENLELTAIKKEGQEHRQQLDSLAPMIAALNDDIQRAQADIQQAQLNWQGVVGKLQHSLSD 682 Query: 573 -------------------------------DEQALTQQWQAVTASLNITLQPLDDIQPW 601 +QQ +A+ + + Sbjct: 683 FVGTAPELALLTINDLGNEAIVATFAQQCEVQLSQFSQQLKALADAKAHYAEAEKQRLSA 742 Query: 602 LDAQDEHERQLRLLSQR-HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 D+ + L L QR +L Q + N+Q+ Q Q EQ+ L ++ A+ P+ Sbjct: 743 SVMADKAQSNLELAEQRLADLNKQNHSTNEQVAQIAQTKEQQWNALKESIVQTAIEAPEL 802 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 + + W + Q + +WQQ + + ++ ++ L+TL E + + Sbjct: 803 EHIDDWFTAKSQASSTWQQTKQQQADIEKQLITQNAELKTLDDKLSSVEKELATLTQQSE 862 Query: 721 QVHEQCLALHSQQQTL-------------------------------------------- 736 + + + +++ L Sbjct: 863 SLVLELTRISAERTELFGDKDIQATSNAMKQKVTEAVNAFDAAQLVLNRSELEHRTEQTK 922 Query: 737 ----QQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQ 792 ++ S +A + AL+ S F+D+ F AAL+DE+ TQL+ LK++L+ Sbjct: 923 HISFSEELTSKQSSYTQASNAWLEALKTSPFEDEVNFEAALLDEEVRTQLQSLKKSLDEA 982 Query: 793 RRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELA-QTHQKLRENTTSQGEIRQ 851 AQ + T + Q H +Q +E + + + T G I Sbjct: 983 IVSAQARLNTAKATQVELQNHVNAKAWQEQEQDQQQVEEATTECQNAQQSHATKIGAISA 1042 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 L+ D+ NR QQ L +QI + + +D LNSLIGSK GDKFRKFAQGLTL+NLV+LA Sbjct: 1043 NLETDSQNRSNQQDLFKQIDEQQVEFDDISRLNSLIGSKNGDKFRKFAQGLTLENLVYLA 1102 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 N+QL RLHGRY L+RKA + LE++V+DTWQ D +RDT+TLSGGESFLVSLALALALSDLV Sbjct: 1103 NKQLQRLHGRYELKRKADDGLELQVLDTWQGDVMRDTKTLSGGESFLVSLALALALSDLV 1162 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 S+KT IDSLFLDEGFGTLDS+TLD AL+ALD LNASGK IGVISHVEA+KER+PVQ+KV Sbjct: 1163 SYKTSIDSLFLDEGFGTLDSDTLDIALNALDNLNASGKMIGVISHVEALKERVPVQLKVT 1222 Query: 1032 KINGLGYSKLESTFAV 1047 K +GLG S++E + V Sbjct: 1223 KHSGLGVSEMEKQYKV 1238 >UniRef50_A6FAU1 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Moritella sp. PE36 RepID=A6FAU1_9GAMM Length = 1223 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 273/928 (29%), Positives = 392/928 (42%), Gaps = 94/928 (10%) Query: 205 AQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQ 264 +QA ++ Q+L S+ + Q L+ +Q + Q+ Q Sbjct: 299 SQADTKLAELEQKQQALQTSVVSAQTAVADNQLKLRSSQAQLDACKQQSQAQEILINEQI 358 Query: 265 ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTM 324 + + Q L+ + +A + + + T Q Sbjct: 359 MPLDNECAQLSKEQLQCQSQQQQQNSELQTTQQNLAALTQTAETAKTTVNACQTYQQQHA 418 Query: 325 ALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQ 384 QS Q QQ N + + AQ + ++ + Sbjct: 419 QDAQLSTRLPLWQSQIQQCNQQQANVATLQQQVITNQQSLQQSLTAQQQLANNVTANVER 478 Query: 385 WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 Q ++ + + ++ A +Q + + + + L L + + + + Sbjct: 479 ESAVKNAVNQAQQQVSDLLVGDDLPDLEQAFSQQSRLQGIVEQLSGLQQRYLTESQEFEA 538 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 Q ++ + Q++ N + R+ +K K +L DV+ + EQE +I +LE R+QL+ GQ Sbjct: 539 NQASMVALEQQRAGINVEITAKRELFKTKKNELNDVQRLLEQEQKIASLEQLRSQLEPGQ 598 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 C LCGST HP +E YQ + + R LE +K++ +G L+ +L +L+ Sbjct: 599 ACQLCGSTEHPLIEEYQHIADSLTVQRKTQLELNLKQIETDGGELKNRLVEANTKLEHFN 658 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLD---------------------------- 596 + +L+Q + QWQ LN L D Sbjct: 659 HRNATLQQQLDSFVAQWQTYNEQLNANLMITDSANTQVFVQQQGVQLAQLSQRIQALKAA 718 Query: 597 --DIQPWLDAQDEHERQLRLLSQRHEL--------QGQIAAHNQQIIQYQQQIEQRQQLL 646 +Q A E ++ L + EL Q Q Q Q + + QQ L Sbjct: 719 NMQLQSAQQALTEFDKNSAQLQHQIELVNRDVKATQDAEQKLTQDAQQQGQVLTELQQTL 778 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 + +T LTLP+ ++WL T QQ Q W Q+ L A ++ L L + Sbjct: 779 INNVTELGLTLPEWSLLDNWLVTCQQALQKWDQQSQLLQAANEQLLLAESQLTPLREQLV 838 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQ------QQTLQQQDVLAAQSLQKAQAQ------- 753 LE + + A Q Q+++ Q L A+ Sbjct: 839 KLELAIAQTLETLSNLSDNLTAKQQQRQQLFGQRSVADARQTMQQQLTTAEQAHQACSTQ 898 Query: 754 -----------------------------------FDTALQASVFDDQQAFLAALMDEQT 778 + AL AS F F AL+ + Sbjct: 899 DHALSNQLHAQQGELTTLQQGLVQQQQESSDCLATWQHALDASPFATDVEFNQALLPAEE 958 Query: 779 LTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQK 838 +L LK L + Q L Q E L QQ + + +T + +L + + Sbjct: 959 KQRLVVLKSQLTANLTRCQALFEQARERLLTLQQTQLTELDIVT-----LVTQLDEITTR 1013 Query: 839 LRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKF 898 L + QGE++Q+L D QQI +D YL SLIGSK+G KFR+F Sbjct: 1014 LNQGLQRQGELKQRLADDTTRSADLADFYQQIKACEADYDDKAYLQSLIGSKDGSKFRRF 1073 Query: 899 AQGLTLDNLVHLANQQLTRLHGRYLLQRKASEA---LEVEVVDTWQADAVRDTRTLSGGE 955 AQGLTLD+LV LANQQL RLH RY LQRK + L ++VVDTW ADAVRDT+TLSGGE Sbjct: 1074 AQGLTLDHLVTLANQQLNRLHSRYQLQRKLASGSEALALQVVDTWLADAVRDTKTLSGGE 1133 Query: 956 SFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SFLVSLALAL LSDLVSHKT IDSLFLDEGFGTLD+ETLD ALDALD LNASGK IGVIS Sbjct: 1134 SFLVSLALALGLSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDNLNASGKMIGVIS 1193 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLES 1043 HVEA+KERIPVQ++V K +GLG S Sbjct: 1194 HVEALKERIPVQVRVNKGSGLGLSSFTV 1221 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 256/918 (27%), Positives = 398/918 (43%), Gaps = 31/918 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI L KN+NSLKGEW+++F +EPF SNGLFAITGPTGAGKTT+LDAICLALYHETPR Sbjct: 1 MKIKRLSFKNINSLKGEWQLNFDQEPFLSNGLFAITGPTGAGKTTILDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S+SQN++MTR+TAEC AEVEFEV+G+ YRA WSQ RA+N P GNLQ +VELA Sbjct: 61 LV-ISKSQNEVMTRNTAECAAEVEFEVQGKGYRASWSQRRAKNSPQGNLQEMKVELAEVV 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA +VK K +L A +TGLD+ RF +SMLLSQG+FAAFLNA +RAELLEELTGTE Sbjct: 120 SGNILASQVKLKKQLVAEITGLDFSRFRKSMLLSQGEFAAFLNAPANDRAELLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFE H A+ EL+KL+A+A GV LLT EQ + L Q Sbjct: 180 IYGQISQAVFESHNLAKAELDKLRAKADGVNLLTDEQRAEIVGEQTGGETLVTDLTQQQT 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 QQ W + ++ Q + Q +L E QP L L A+PA LR + ++ Sbjct: 240 SLQQQKQWREQLEKAQVGVTEAQTSLVNTEQETTAQQPALDRLEQAEPAEALRLPFTHLS 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ-QQQSLNTWLQEHDRFR 359 + LA + Q+ + + T + S A + A+L +QQS + +++ Sbjct: 300 QADTKLAELEQKQQALQTSVVSAQTAVADNQLKLRSSQAQLDACKQQSQAQEILINEQIM 359 Query: 360 QWNNEPAGWRAQFSQQTSD-----------REHLRQWQQQLTHAEQKLNALAAITLTLTA 408 +NE A + Q S +++L Q A+ +NA Sbjct: 360 PLDNECAQLSKEQLQCQSQQQQQNSELQTTQQNLAALTQTAETAKTTVNACQTYQQQHAQ 419 Query: 409 DEVA-----TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 D +Q + + ++ L Q++ Q+ L Q A Q + T Sbjct: 420 DAQLSTRLPLWQSQIQQCNQQQANVATLQQQVITNQQSLQQSLTAQQQLANNVTANVERE 479 Query: 464 NEMRQRYKEKTQQL------ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAV 517 + ++ + QQ+ D+ + + ++ L+ QL Q L S A Sbjct: 480 SAVKNAVNQAQQQVSDLLVGDDLPDLEQAFSQQSRLQGIVEQLSGLQQRYLTESQEFEAN 539 Query: 518 EAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQAL 577 +A + + + + + L + ++ + E + + Sbjct: 540 QASMVALEQQRAGINVEITAKRELFKTKKNELNDVQRLLEQEQKIASLEQLRSQLEPGQA 599 Query: 578 TQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 Q + L Q + D ++ + EL+ ++ N ++ + Sbjct: 600 CQLCGSTEHPLIEEYQHIADSLTVQRKTQLELNLKQIETDGGELKNRLVEANTKLEHFNH 659 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEE--ESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 + QQ L + + + Q + + A Q Q + +L+ ++ Sbjct: 660 RNATLQQQLDSFVAQWQTYNEQLNANLMITDSANTQVFVQQQGVQLAQLSQRIQALKAAN 719 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 L++ Q+ + V+ A +Q L Q Q L + Q Sbjct: 720 MQLQSAQQALTEFDKNSAQLQHQIELVNRDVKATQDAEQKLTQDAQQQGQVLTELQQTLI 779 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 + + + + L +Q Q + Q + Q Q +Q R Sbjct: 780 NNVTELGLTLPE----WSLLDNWLVTCQQALQKWDQQSQLLQAANEQLLLAESQLTPLR- 834 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 + + L + + Q + L+ L + ++ Q + QQ L Sbjct: 835 EQLVKLELAIAQTLETLSNLSDNLTAKQQQRQQLFGQRSVADARQTMQQQLTTAEQAHQA 894 Query: 876 QVEDWGYLNSLIGSKEGD 893 L++ + +++G+ Sbjct: 895 CSTQDHALSNQLHAQQGE 912 >UniRef50_B2UXL2 Exonuclease SbcCD, C subunit n=3 Tax=Clostridium botulinum RepID=B2UXL2_CLOBA Length = 1180 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 194/1200 (16%), Positives = 430/1200 (35%), Gaps = 176/1200 (14%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + LR+K LNS E KIDF + G F I GPTG+GK+T+LD I LALY + R Sbjct: 1 MRPIELRVKGLNSFIEEQKIDFNK--LTERGFFGIFGPTGSGKSTILDGITLALYGQVSR 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKG---EAYRAFWSQNRARNQPDGNLQVPRVELA 117 S+ + + + +F++ G + Y R + ++ Sbjct: 59 KSS------NYINTNCDSLNVSFKFQISGVEKKIYIVSREFKRDNKTGNPRTSRAKIIDT 112 Query: 118 RCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 +ILADK + E + GL FTR+++L QG+F+ FL + K R E+LE L Sbjct: 113 TNGIEEILADKAQKVTEKCEEIIGLGLEDFTRTVVLPQGKFSEFLKLEGKSRREMLERLF 172 Query: 178 GTEIYGQI-SAMVFEQHKSARTELEKLQAQASGVTL-------LTPEQVQSLTASLQVLT 229 + YG I S + + +TE L + G L E+++ L Sbjct: 173 NLQKYGNILSIKLSREIGKEKTESNLLTGELKGYDEVSSEKFNLKNEELECARNQLSNAN 232 Query: 230 DEEKQLITAQQQEQQS-------------------------------------------- 245 +E K++ + ++ Sbjct: 233 NELKEIEKKYKSSEEIWNLQFELNSYKEQEKVLNYKSSEIEEDKIKLKLAEAALKVNPYV 292 Query: 246 ---LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQ-----PARNLRPHWE 297 N L +E+Q+E + ++ E E ++ +L ++ + + Sbjct: 293 LAYENTLNEGNEIQKEKESLEINFKKLKVERESSEKKLLEITEKKDKEIPELKLREQKVS 352 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 + E L + ++IEE+ +++Q ++++ ++ ++ ++ + Sbjct: 353 DVIEEKNKLDILDKEIEEITSKVQVLREKYKKEKNNSVIIEDSIRNTTINIKELEEKFES 412 Query: 358 FRQWNNEPAGWRAQF------------------------SQQTSDREHLRQWQQQLTHAE 393 + + A + + + + + + Q+ Sbjct: 413 LKIDDELKAKIQNGLLITEKYNLFKKNISNNKNKLTNINKEIENLKVNFDELQKIYKVKS 472 Query: 394 QKLNALAAITLTL------TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQV 447 LN L +++ + +I + + +L+ Sbjct: 473 NSLNKNKDELENLIKHCPGNQEDLLILQKNLTNCNEKWEKFNQYSDEIKKSKLLIKELEE 532 Query: 448 AIQNVTQEQTQRNAALNEMRQRYKEKTQQ------------------------------- 476 ++ ++ + L +++++YK+ + Sbjct: 533 LLKKGKDKKFSIDNELLDLKEKYKKCEIENLAFKIRMNLKNGEACPVCGSLEHDTKSKDK 592 Query: 477 ---LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG------- 526 D + + +I E L+ S + L+ Sbjct: 593 LIDDIDDDIVNQLNNKINEYEINLKVLEQDITIYNTKINSEEDKIREKNLQIENLGEEFK 652 Query: 527 -----VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 +S+ L+ +++ + L L + + + EN+++ + + Q Sbjct: 653 NIVPKDLESQFNRLKKDLENYDLKKEILENTLIQLKDENHKLENDSEIISTLIKEKETQV 712 Query: 582 QAVTASLNITLQPLDDIQPWLDAQ----------DEHERQLRLLSQRHELQGQIAAHNQQ 631 + L I ++ L++ + L+ + + + + +R L +I Sbjct: 713 NLINEELAIDIEELNNTKEKLNIIIRETKVSDFNKKSQEIVNIEKEREILSKKIKEFRIN 772 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 I ++ +Q Q+ L +E+ + + + +++ L N I Sbjct: 773 IETLIKEKDQVQENLNLITEEGTHARTSLNEKNKNREEKIKIIKDKLEKEFNLIDDSNNI 832 Query: 692 QQ--LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 + L +L+++ + E E + E + + + + + ++ ++ + + Sbjct: 833 DENKLFMLLDSIKKEIECIEKEFKSIHELKDIICIKYESCNEKFISIVAKENQIIKRCEI 892 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 + + +L++ F+ + A ++ + L+ + + + + + + + L Sbjct: 893 EKENLNKSLKSENFESIEEVKANIIGFNDIEILKAKIEKYKEDLSKIKGAIESSVKKLNN 952 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + IQ + + + + ++ ++ K + ++ + L+ + Sbjct: 953 RE--------VTEQQWINIQNSVKEKKLEFESLNEMKIKLEEECKFIDNKLKELKDLLIK 1004 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKAS 929 ++ ++ L +G KF +F L + A+++L + + + Sbjct: 1005 KEKIDHKLALLDD---LDKLFKGKKFVEFVAITQLKYISMEASKKLKDITNG-IYGLEVD 1060 Query: 930 EALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFG 987 E + + D A RD TLSGGE+FL SLALALALS + ++ FLDEGFG Sbjct: 1061 ENGKFIIRDYKNGGAERDASTLSGGETFLTSLALALALSSQIQLKGTAPLELFFLDEGFG 1120 Query: 988 TLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN---GLGYSKLEST 1044 TLD + L+ + +L+ L+ IG+ISHVE++K R+PV++ + G +LE + Sbjct: 1121 TLDDDLLEVVMSSLEKLHNDKLKIGIISHVESIKNRVPVKLILTPAESGKGGSKVRLERS 1180 >UniRef50_C8ZZD9 Exonuclease SbcC n=4 Tax=Enterococcus RepID=C8ZZD9_ENTGA Length = 1052 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 225/1068 (21%), Positives = 431/1068 (40%), Gaps = 50/1068 (4%) Query: 8 LKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQS 67 +KN E + F GLF ++G TGAGKTT+ D + AL+ ET + Sbjct: 1 MKNFGPYIHE---ELDFGDFQEGGLFLVSGKTGAGKTTIFDGMTFALFGETSGNLRSGKE 57 Query: 68 QNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC------AD 121 T E F+ + Y + + G+ + R Sbjct: 58 MRSTFASPTEETSVRFSFDHQHLHYEIERRPEQVLAKKRGDGVTNQAAKVRLTIYDQQGK 117 Query: 122 GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEI 181 + K + L LD +F + +LL QG+F FL A E+ ++L + GTE+ Sbjct: 118 ERKQISKKNEVDIFIKDLLQLDAKQFFQIILLPQGEFRNFLIASSNEKEKVLRNIFGTEM 177 Query: 182 YGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQS----LTASLQVLTDEEKQLIT 237 Y + + + EQ K ++EK Q A + + L +L + ++ + Sbjct: 178 YQRFNEWLKEQVKKQTKQIEKQQTAADHLVTRFEWTEPATPVSLVETLAYWQTDLEKQRS 237 Query: 238 AQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWE 297 QQ + ++ + QEA + + +ALAE+++ Q A L+ + Sbjct: 238 HQQTIEAKKFQAEQEKKTAQEAFYLAKEIHKALAEQQELSQQAANLAAKESQILDDKLRL 297 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALR---ASIRHHAAKQSAELQQQQQSLNTWLQE 354 + + ++ I +Q +E + + + + ++ E Sbjct: 298 QQLDWASEHQEILRQKDERTAEVAQAIQQLTFNQQSLEQWQESQEIWDKSREVQVDRKDE 357 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATA 414 H +Q A + Q + + Q+ +T E++ L E Sbjct: 358 HTAAKQRLQILAQLKPLAEQVQQQEKQVASLQETVTQQEKQAQHLKEQQNLAMNQEQGLK 417 Query: 415 LAQHAEQRPLRQHLVALH-GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEK 473 Q + + ++ Q + L + + + + Q+ T + L E +Q+ K Sbjct: 418 EEIQKHSIYQVQEVQLVRGENLLYQWQMLKKEEQQLTDTQQQLTDQQRKLQEKQQQLVSK 477 Query: 474 TQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVE---AYQALEPGVNQS 530 +L + + + L G+PCP+CGS HPA + Y E ++ Sbjct: 478 YDELTEELVQEKSRNAKMQIARLSLLLVEGEPCPVCGSFEHPAAQKHTEYSNEEIIDSEQ 537 Query: 531 RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI 590 +L +LEN+++++GE+ +T L+ + Q Q + + +L++ +Q Q + + L Sbjct: 538 QLESLENQLQQVGEDRSTNLLLLEQVNDQFQTIKQKMSALKEKQQTTYQTLREILQPLME 597 Query: 591 TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 + ++ + + L+++ E+ Q Q ++Q +Q L Sbjct: 598 NMLGQTVLKEGAGKEPADPLLVEGLTEK-EISTTYFKCQQINQQLKEQFALDRQKLTEVQ 656 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN--RIQQLTPILETLPQSDELP 708 T + E+ L T + + + + L ++QL E L Sbjct: 657 TNSQHLTEELTALEASLKTASDALRLEEGKLSSLKEQTEGVSLEQLNEEQEQLAAQSSRL 716 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 +++ EQ L QQ+ LQQ Q+ Q AQ + + L A+ Sbjct: 717 AALIEADQLEEQRLKEQYTILTEQQRNLQQFLADKQQAAQLAQERLEEVLPAA------- 769 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 EQ + L + + R +T Q + + +E + Sbjct: 770 -----CTEQQMRSLLNDLEERQELRSTIKTYEQQQRFVQQRQLELAQFLQNKAVPDLEVL 824 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 Q+++ Q+ + + ++Q+KQ+ ++ Q + QQ + +++ L+ +I Sbjct: 825 QEQVDQSETAVEQLQEQVIRGKEQIKQNQRLLEELQIIYQQNTKQLEKISHLQQLSEVIN 884 Query: 889 SKEGDK--FRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR-------KASEALEVEVVD 938 + K ++ L ++ +AN +L RL GRY + ++S LE+++ D Sbjct: 885 GENEKKTSLERYVLQRFLTEILEVANVRLARLTRGRYQFELADKVGSYRSSTGLEIDIYD 944 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLD 995 A ++R TLSGGESF+ +LALA++L+D++ S I++LF+DEGFG+LD E+L+ Sbjct: 945 -DNAGSLRRAHTLSGGESFIAALALAISLADVIQNRSGGIEIEALFIDEGFGSLDEESLE 1003 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 A++AL+ + G+ IG+ISHV ++ERI Q+ V+ +G G SK+ + Sbjct: 1004 MAMEALEMIENEGRMIGIISHVRELRERILQQVVVQ-TDGSGQSKIRT 1050 >UniRef50_A5WEF8 SMC domain protein n=8 Tax=Proteobacteria RepID=A5WEF8_PSYWF Length = 1346 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 208/909 (22%), Positives = 357/909 (39%), Gaps = 25/909 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW+IDF+ E + + G+FAI G TGAGKTT+LDAICLALY ETPR Sbjct: 1 MRLIELRLKNLNSLKGEWRIDFSDEAYINEGIFAIIGHTGAGKTTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +SN+S+S N++MTR T ECLAEV ++ G YR W Q RA +PDGNLQ EL+ + Sbjct: 61 ISNISKSTNEVMTRQTGECLAEVVIDINGTHYRCHWYQRRAHGKPDGNLQDATHELSLAS 120 Query: 121 D------GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLE 174 D G +L +K + LT +D+ +FTRS+LL+QG FAAFL+AK ERA++LE Sbjct: 121 DHEGQKAGTVLEEKSSLTKKRIVELTRMDFQQFTRSILLAQGSFAAFLSAKADERADILE 180 Query: 175 ELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQ 234 ++TGT+IY IS V E+ + L LQ + G+ LL E L L+ T + Sbjct: 181 KITGTDIYATISERVHEKKRQEEALLNTLQTKLQGLELLDVEAETQLKQQLEANTKQLTD 240 Query: 235 LITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRP 294 Q + L W+T ++L ++ + ++ + + L A A + Sbjct: 241 HRAIVSQLEDQLTWITEVEQLTEQVVTLNADVAVSIQAKTAFEEDAKRLERANKALEIES 300 Query: 295 HWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE 354 H+ ++ A+ + Q++ ++ + + Q LN L Sbjct: 301 HYTQVCNLRASKHQLDQELSNKQQQIPVLQQQLDEQQTQMTQAQKREASANQVLNDTLPV 360 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD--EVA 412 ++ RQ +N+ + QQ + +Q + +L + + T A+ Sbjct: 361 IEQTRQLDNQIEQTQLTLKQQQQLQHTHQQSLAEFKATITRLISDKSQTQQQLAEVDSYL 420 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 H++ L L + + + +L QE LN ++Q Sbjct: 421 QQYQHHSQLNVDISGLNTLGLTLKAELENNYKLYQQQHLKEQENKDLTQQLNALKQEQAT 480 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 + + + LQ L H + Q + Sbjct: 481 NQALYETKQAKLNELYHAQQAL-----LQGQPLAALRQQQEHSDALSTQLSILQQHLDNK 535 Query: 533 LALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 L ++ + + +++ E + + L +Q Q + + + Sbjct: 536 AELATQISAEKAVTTQFDSDMADLKSVIEQAEQDLEMLNCHQQDKQSQVEQQQKIIELEA 595 Query: 593 QPLDDIQPWLDAQ-------DEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + D I+ Q EH S E ++ ++ Q +I + +Q Sbjct: 596 KLEDYIELLAHNQPCPLCGSTEHPSVANKKSNSSEAHTKLHQLKDELSQIVAKINRAKQN 655 Query: 646 LLTTLTGYALTLPQEDEEESWL-ATRQQEAQSWQQRQNELTALQNRIQQLTPILET--LP 702 L Y T ++ + + L Q+ + Q + L ++ +L+ L Sbjct: 656 LDDAKLAYKNTEYKQQQSHAQLTNQLQRLNTTLSQILSHANTLSEQLSAAPTVLQQQLLN 715 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 S L + Q +Q A Q S Q +Q Q + L Sbjct: 716 SSAHLHETDPQSSHPKNHQNDQQPAAPKPALLLKLSQLTAGFDS-QPSQQQLEALLAKGK 774 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 + A Q++Q + ++ Q T + + + + Q + Sbjct: 775 QITACIYDAQQRLHHQKQQIKQSLEE-QDALTQQITDIEKRHKVIEADNQRLMMHIKDIE 833 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + Q + Q + + + GE QQL+ D + + +T + Sbjct: 834 AKQQLNQHSITQATAFIDQGFSKLGESAQQLQGLLDKYKDSAAINDASQTLTDCEQSLAQ 893 Query: 883 LNSLIGSKE 891 L + +++ Sbjct: 894 LRHCMNNQQ 902 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 190/890 (21%), Positives = 316/890 (35%), Gaps = 74/890 (8%) Query: 216 EQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEK 275 E L + E K L +Q E +Q QQAL + + Sbjct: 448 ENNYKLYQQQHLKEQENKDLTQQLNALKQEQATNQALYETKQAKLNELYHAQQALLQGQP 507 Query: 276 AQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAA 335 + ++ ++ A LA + V T+ S MA S+ A Sbjct: 508 LAALRQQQEHSDALSTQLSILQQHLDNKAELATQISAEKAVTTQFDSDMADLKSVIEQAE 567 Query: 336 KQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT------------------- 376 + L QQ + +++ + + + + + Sbjct: 568 QDLEMLNCHQQDKQSQVEQQQKIIELEAKLEDYIELLAHNQPCPLCGSTEHPSVANKKSN 627 Query: 377 --SDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQ 434 L Q + +L+ K+N T Q L L L+ Sbjct: 628 SSEAHTKLHQLKDELSQIVAKINRAKQNLDDAKLAYKNTEYKQQQSHAQLTNQLQRLNTT 687 Query: 435 IVPQQKRLAQLQVAIQN----VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI 490 + L + + Q+ +A L+E + D + + A + Sbjct: 688 LSQILSHANTLSEQLSAAPTVLQQQLLNSSAHLHETDPQSSHPKNHQNDQQPAAPKPALL 747 Query: 491 KTLEAQRAQL-----QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEE 545 L A Q L A + ++ E L ++ Sbjct: 748 LKLSQLTAGFDSQPSQQQLEALLAKGKQITACIYDAQQRLHHQKQQIKQSLEEQDALTQQ 807 Query: 546 GATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ 605 + + I QR + + +Q TA ++ L + L Sbjct: 808 ITDIEKRHKVIEADNQRLMMHIKDIEAKQQLNQHSITQATAFIDQGFSKLGESAQQLQGL 867 Query: 606 DEHERQLRLLSQRHELQGQIAAHNQQII-------------------------------- 633 + + ++ + Q+ Sbjct: 868 LDKYKDSAAINDASQTLTDCEQSLAQLRHCMNNQQHLDDKQCYDSLQPLRNLSQWMGALN 927 Query: 634 ----QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN 689 +Q + T T Q D+E S LA +L + + Sbjct: 928 NSYVAKLASKQQLFTEIQTLDTQLKSNQAQADKEHSQLALLTDTIHQLSHEMTQLQSRRR 987 Query: 690 RI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQS 746 + +Q+ L + + + + + Q L ++ L+ Q Sbjct: 988 DLFGDKQVNSEDSRLRAALDSAKDQLNQINKEHSHTQHQLSTLQAESLRLEAQLSELQSQ 1047 Query: 747 LQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET 806 L + + T L A FD + +LAA + ++ L Q +Q + N AQ + Sbjct: 1048 LAQQEHALSTQLVAHDFDSEADYLAARLPKEQRDALNQRQQEIVNALNYAQNALKTV--- 1104 Query: 807 LAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 +HQ T T E +Q + Q + E G I QQL+ + + Q++ Sbjct: 1105 --EHQLQHKTANPQTTDTKENLQAQRQQQQDLVDELIEQVGGINQQLQTNEARKTDQRSQ 1162 Query: 867 MQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQR 926 +++IA+ Q+++ W L LIGS +G K+R FAQGLT + +V AN QL ++ RY+L R Sbjct: 1163 LEKIAEQKQKLKVWQELYGLIGSADGKKYRTFAQGLTFEIMVSNANTQLRKMSDRYILVR 1222 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGF 986 + LE+ V+D +Q +R T+ LSGGE FL+SLALAL LS + S R+DSLFLDEGF Sbjct: 1223 DENSPLELNVIDDYQGGLIRSTKNLSGGEGFLISLALALGLSSMASQNIRVDSLFLDEGF 1282 Query: 987 GTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 GTLD ++LD AL+ L L GK IG+ISHV+A+K+RI QI+V K++G Sbjct: 1283 GTLDEDSLDVALNTLTNLQQEGKLIGIISHVQALKDRIHTQIRVDKLSGG 1332 >UniRef50_D0MI39 SMC domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI39_RHOM4 Length = 1019 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 222/1065 (20%), Positives = 411/1065 (38%), Gaps = 80/1065 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M ++LRLKN S + F + ++G G GK+ LLDAI AL+ E + Sbjct: 1 MVPVALRLKNFMSYGEAAPV----LDFEQFQVACLSGNNGQGKSALLDAITWALWGEARK 56 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQP--DGNLQVPRVELAR 118 S+ + L+ + E F+++G+ Y R+ + L++ E Sbjct: 57 TSDSRKPDEHLLRVGAQQMEVEFTFDLEGQRYCVLRRYTRSSSGKTSKSELELQVYEPET 116 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 + A V + E L GLDY F + L QG+ F KP ER E+L + Sbjct: 117 GTYRALTASSVSETQERLNQLLGLDYQTFINASFLLQGRADEFTRKKPSERKEILARILN 176 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 + Y +++ + E+ + A+ E+++ Q + E+ +L + L + L Sbjct: 177 LDRYERLAELAREEVREAKARAEQIERQLEQIQEALQEE-SALKTRHEALRERRHALEAE 235 Query: 239 QQQEQQSLNWLTRQDELQQE---------------ASRRQQALQQALAEEEKAQPQLAAL 283 ++ Q+ L L Q +E +R Q+ ++ + E + Q L Sbjct: 236 RETRQRHLQTLQEQRVRLEENRRRLEELQEQERQQTARLQEERERLVRLEAELQDLEQLL 295 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 + + + E L R+Q + +L + R K+ A +++ Sbjct: 296 ARREEIEQAHARERTLQEERRQLEAKREQYWGIQKQLDQVQSELERQRSELEKKLALVRK 355 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT 403 +Q+ + LQE Q A Q + L Q +QQ + E+++ ++ Sbjct: 356 EQEHVQRQLQELTTRLQERPRIAQRLKAAEQARQEMARLEQQRQQRSALEEEIRHVSETL 415 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 L E+ L Q + + + + L Q + + + +E + Sbjct: 416 LAA-QKELEGQLRSLQRQLEQEADVPEQLAALEARCRELEQQEARYRALQEELERLKETG 474 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 + + +L +++ + + Q CP+CGS P Sbjct: 475 QGKKAAIEALQARLQELERQQQDLQQRYDTFRQAEA----DVCPVCGSELGP-------- 522 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + E QL+ + + L +L Q+ +AL QQ+ Sbjct: 523 ----------------EHREEVERHYEEQLEELARGLDEGRRRLAALEQEREALRQQY-- 564 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A L+ + + A+ + E R ++R L Q++A Q+ Q + Q Q Sbjct: 565 -IARLSEAKRLEKAPEELARARAQLEELQRRNARREALARQLSALQTQLEQ--RAFAQEQ 621 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + L L +P ++++ L + EA S ++R EL LQ R + L L Q Sbjct: 622 RRRLEELHRKLEAIPFDEQKFEVLRQQAAEAASLRERLQELETLQGRRESLESEQRRLAQ 681 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 ++ E +Q+ ++ AL + Q + A+ Q ++ Sbjct: 682 LEQQYRQELDQ-GPALQQLLQRKRALQEKLQAI---------GFDPARLQQVQQELEALG 731 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 D L E+ L + Q ++ L+ + RQ + + +T Q + +D + Sbjct: 732 DVGAQVHRLLHAEENLKKGRQERETLQRRIRQ-EEQALERLQTQLQQLRQELEDLPRVQA 790 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 E+ +Q+LA T + LR GE + +++Q R Q++ L Q++ + + +L Sbjct: 791 ACEEARQQLAATEEALRGVQQEIGECQARMEQLQALRAQRKQLRQELESVRHRERLHRHL 850 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR--------YLLQRKASEALEVE 935 G TL L AN+ L RL ++ ++ Sbjct: 851 QQAFG---KHGIPSLIIEQTLPELEARANELLERLTDGRMHVYLRTQRAKKSGGTKETLD 907 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSET 993 ++ T + A R T SGGE+F V AL LAL+ L++ R+ +L +DEGFGT D + Sbjct: 908 IIITDEQGAARPYETFSGGEAFRVDFALRLALAQLLAERSGVRVRTLVIDEGFGTQDPQG 967 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 L ++A+ A+ + I VI+H+ +K+ PV+I+V+K G Sbjct: 968 LQHLVEAIQAVQSDFDKILVITHLSELKQVFPVRIEVEKDPVEGS 1012 >UniRef50_Q7N0H5 Nuclease sbcCD subunit C n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N0H5_PHOLL Length = 1228 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 315/981 (32%), Positives = 465/981 (47%), Gaps = 114/981 (11%) Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 LT E Q+ + A L + Q + E ++L L + + Sbjct: 248 LTREEELEQLVTENNAILQQAEKALTHAEPQLQKLA--NSEPAETLRPLLDDKNRTQYEH 305 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL----------SL 285 +Q ++ L + + ++ A AE ++ + Q L + Sbjct: 306 QRTSKQLEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVIPLDHQI 365 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQ-------- 337 A + L ++I E L + QQ + N R S R + ++ +Q Sbjct: 366 AVQIKELNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPYHQYFGE 425 Query: 338 -----SAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQ-TSDREHLRQWQQQLTH 391 + +Q+ + + + E ++Q ++ + Q Sbjct: 426 KLAFWQHQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQQIENNQPLELA 485 Query: 392 AEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQN 451 EQ + + +++ L Q+ EQ PL+ L L QI+ Q +A + +Q Sbjct: 486 FEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHHIRLQQ 545 Query: 452 VTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 + + + + ++ +K Q L+D+ + E +I +LE +RAQL+ G PCPLCG+ Sbjct: 546 PEKLLKEFPVQIESIDKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQLKEGSPCPLCGA 605 Query: 512 TSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLR 571 HPA++AYQ +E ++ RL L + + L +L + + ++ E Sbjct: 606 EHHPAIQAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEYDHILQEITDAE 665 Query: 572 QDEQALTQQWQAVTASLNITLQPLDD---------------------------------- 597 LTQQWQ A L + D Sbjct: 666 PRLNILTQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTEFELAEKTYQKT 725 Query: 598 ---IQPWLDAQDEHERQLRLLSQRHE-LQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 + + E ER + L +H L+ Q++ +I Q Q ++ + + + L Y Sbjct: 726 EKTVTAHQEYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKMTSELQQY 785 Query: 654 ALTLPQEDEEESWLATRQQEAQ-------SWQQRQNELTALQNRIQQLTPILET------ 700 L+LP ++ E+WL R++E Q +WQQ Q E +QN+I+ L E Sbjct: 786 NLSLPMLNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKEEYLSHLN 845 Query: 701 -----------------------------------LPQSDELPHCEETVVLENWRQVHEQ 725 L Q + L + +Q Sbjct: 846 RLNQTAQQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEEMHKQALSHLQQAQSS 905 Query: 726 CLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQL 785 L ++ D + Q Q+A+ F+ AL S F DQ A +AL+ ++ +L QL Sbjct: 906 INQLTGAIHETEKNDNQSEQQKQQAEQNFNAALAKSPFADQHAVESALLSQEQRKELRQL 965 Query: 786 KQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTS 845 K+ LE Q+ QA L + AETL QH+++RP+ T + Q+ ++L +L+ NT Sbjct: 966 KEQLEQQQIQANALCQKAAETLQQHRKNRPELLNQYTKS--QLTEQLENMTDELKRNTLQ 1023 Query: 846 QGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLD 905 QGE++ L DA RQQQ++L+++I+ Q +DW YLN+LIGS +G KFR+FAQGLTLD Sbjct: 1024 QGELKNLLGNDAIRRQQQKSLLEEISHCRQNYDDWSYLNNLIGSADGAKFRRFAQGLTLD 1083 Query: 906 NLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 +LVHLANQ+L +LHGRY LQRK S+ LE++VVDTWQADA+RDT+TLSGGESFLVSLALAL Sbjct: 1084 HLVHLANQRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLALAL 1143 Query: 966 ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 ALSDLVS+KT IDSLFLDEGFGTLD ETLD ALDALD LNASGKTIGVISH+EAMKERIP Sbjct: 1144 ALSDLVSNKTCIDSLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHIEAMKERIP 1203 Query: 1026 VQIKVKKINGLGYSKLESTFA 1046 VQIKVKKINGLG SKL F Sbjct: 1204 VQIKVKKINGLGISKLSPEFR 1224 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 273/934 (29%), Positives = 423/934 (45%), Gaps = 57/934 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFAS+GLFAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQP+GNLQ P+VELA + Sbjct: 61 L-TISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQAPKVELALSS 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKILADK++DK E +TGLDYGRFT+S+LLSQG FAAFLNA+P ERA+LLEELTGTE Sbjct: 120 SGKILADKIQDKKEKIIEITGLDYGRFTKSILLSQGDFAAFLNAQPNERADLLEELTGTE 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S +++QHK A++ L+ LQA+AS + LLT EQ Q Q LT E QL + Sbjct: 180 IYGILSQQIYQQHKQAQSVLDILQAKASTIDLLTAEQHQQYLEQQQQLTHAESQLNQQIK 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q S WLTR++EL+Q + LQQA A+PQL L+ ++PA LRP + Sbjct: 240 TVQHSAQWLTREEELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRPLLDDKN 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF-- 358 +Q+EE++ +LQ I+ A + + QQ + Sbjct: 300 RTQYEHQRTSKQLEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVI 359 Query: 359 ---RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA------- 408 Q + Q + L QQ A Q+ + L Sbjct: 360 PLDHQIAVQIKELNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPY 419 Query: 409 -----DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 +++A Q + ++ +Q + ++ + QL + ++ Q+ Sbjct: 420 HQYFGEKLAFWQHQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQQIENN 479 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ--LQAGQPCPLCGSTSHPAVEAYQ 521 + +++ QQ ++ E K L + Q LQ A A Sbjct: 480 QPLELAFEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASH 539 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ- 580 + + L +++ + ++ + + L +T+++Q E + SL ++ L + Sbjct: 540 HIRLQQPEKLLKEFPVQIESIDKQLSDKQQHLSDLTQRIQ-LEQKIVSLEKERAQLKEGS 598 Query: 581 -----------WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHN 629 ++ + + ++ L++++ Q + Sbjct: 599 PCPLCGAEHHPAIQAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEYDHIL 658 Query: 630 QQIIQYQQQIEQRQQLLLT--TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTAL 687 Q+I + ++ Q + ++L + E ++ Q + Q + E Sbjct: 659 QEITDAEPRLNILTQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTEFELA 718 Query: 688 QNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSL 747 + Q+ + + + + + +Q L + Q Q + + + Sbjct: 719 EKTYQKTEKTVTAHQEYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKM 778 Query: 748 QKAQAQFDTAL--------------------QASVFDDQQAFLAALMDEQTLTQLEQLKQ 787 Q++ +L Q + QQ + + + L + K+ Sbjct: 779 TSELQQYNLSLPMLNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKE 838 Query: 788 NLENQRRQAQTLVTQTAETLAQHQQHRPDD--GLALTVTVEQIQQELAQTHQKLRENTTS 845 + + Q + LA+ QQ R ++T + +QQ+ + + ++ + Sbjct: 839 EYLSHLNRLNQTAQQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEEMHKQALSH 898 Query: 846 QGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 + + + Q + + Q Q QQ E Sbjct: 899 LQQAQSSINQLTGAIHETEKNDNQSEQQKQQAEQ 932 >UniRef50_C4FEI1 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FEI1_9BIFI Length = 1104 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 203/1163 (17%), Positives = 392/1163 (33%), Gaps = 177/1163 (15%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK++ L+ + + KGE+ IDF + +F I G TGAGKTT+LD I ALY Sbjct: 1 MKLIGLKFQGVGPYKGEFSIDF--AALTRSHMFLIDGETGAGKTTILDCITFALYGNISG 58 Query: 61 -------LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPR 113 + + ++ + + ++ FE G Y+ + S R + Sbjct: 59 NTEGRNGAGDKQRLRSRFLDGTEEKTYVDLIFEEGGHYYKVYRSPEYPRAKARSEGFTSE 118 Query: 114 VELARC--------------------------------------ADGKILADKVKDKLEL 135 A A + + KV + Sbjct: 119 KSKANMMRIAGDYEAEFRSLIDEVPQNAENGREAERYYAFFDMPARAEAITSKVSEVSVE 178 Query: 136 TATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQH-- 193 L GL+ +F+++++L+QGQFA FL +P++R EL+++L + Y I + Sbjct: 179 VTGLLGLNRSQFSKTIMLAQGQFAEFLRMRPEQRTELVKDLFCAQEYEDIQNQLNVMRQQ 238 Query: 194 --KSARTELEKLQAQASGVTLLTPEQVQSLTASLQ------------------------- 226 + + L A ++L A Sbjct: 239 YGRRVDEQRHDLAAAIRDNQANAGRIREALNAYRDIDGGSSDLTAASDAAQPEAMPFGDD 298 Query: 227 ---------------------------VLTDEEKQLITAQQQEQQSLNWLTRQDELQQEA 259 L T + + Q Sbjct: 299 ARWGLNEAGDIDEPAYSADQIVARLDGTLESVRSDAQTLVTKAETQFAEADSAWRESQRR 358 Query: 260 SRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 + A+++A + AQ ++ L++ + A + + + + + + Sbjct: 359 NDTANAVRKAQGDLRSAQVRMEELNVLEQENKRDEQRVEQAMQANPIMDLARDRKRQDEL 418 Query: 320 LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR 379 + S + R ++ Q L + LQ + E + + Sbjct: 419 IASNVRDRERLQAELD-QYESLDSLNRDHAQALQAAGVAQAAEREMEIAQTHGKLVGQMQ 477 Query: 380 EHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 + Q+ T Q L + + L Q ++ R + V + Sbjct: 478 QAQHALQKAETAWRQCQGKLEHAQRAIGQFPEESRLEQQLDEIATRLGAQGQLTETVNRA 537 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 + L + + + E+ + A + + + +++ + + Sbjct: 538 RELLEHAQRHETLLPERDRAEATVKALERSHEDAVAAYERAQRQL----YAAGAVRYVQE 593 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L G+PCP+CGS HP Q E ++ + AL+ + ++ E R L + + Sbjct: 594 LHDGEPCPVCGSREHPHPA--QQPEQTPTKAGIDALKVQAERRAGELGEARIALAELGQN 651 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 ++ D+ + E +R L+ L Sbjct: 652 IEA--------------------------EHEASGGCDVLEAENRLAEAKRALQKLEPLR 685 Query: 620 ELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQ 679 + G++ +Q ++ ++++ +Q + A + Q+ ++ Sbjct: 686 DEYGKLKRSREQRRAFKNELDRAKQDCVAVQAQCAAARQALE-------------QAAER 732 Query: 680 RQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQ 739 + + ++ Q E + L+ + + L + +TL QQ Sbjct: 733 AEGITAQSVEQERERAERRLAEAQRQERRAQQIEQKLKERNAIETRITELTAHNETLNQQ 792 Query: 740 DVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTL 799 A++L+ L +S F D A A +DE+++ QL+Q + + AQ Sbjct: 793 RGTIARALR-------EKLASSAFADLDAACHAALDERSIQQLKQRIDSYKRNHAAAQGE 845 Query: 800 VTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADN 859 + + + L + + G ++E+ + L + + E Q + Sbjct: 846 LERADDELTRQRHAWKAIGGQY--SIERTAEALEASRLRRDEAMRLQSTAATLDAERRRY 903 Query: 860 RQQQQTLMQQIAQMTQQVEDWGYLNSLIGS------KEGDKFRKFAQGLTLDNLVHLANQ 913 Q + + Q + L +A +++ AN+ Sbjct: 904 ASQLRVMASDWRQAMVSYAPIRTMALLAMGDRNSPAAHKVSLITYAVTERFRDVLDRANE 963 Query: 914 QLTRLHGR-YLLQRKASEA-------LEVEVVDTWQADAVRDTRTLSGGESFLVSLALAL 965 L + G Y L+ E L +EV+D D + TLSGGE+F VSLALAL Sbjct: 964 LLKDIRGGIYELRLGDHEGRAGGKTGLPIEVLDRRT-DIATEPSTLSGGETFFVSLALAL 1022 Query: 966 ALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKE 1022 AL+D++ +D+LF+DEGFGTL E LD +D L + G+ IG+ISHV +K Sbjct: 1023 ALADVIQAENGGVSMDTLFIDEGFGTLSDEFLDDVMDVLRGIA-RGRDIGIISHVGRLKG 1081 Query: 1023 RIPVQIKVKKINGLGYSKLESTF 1045 +I +I V++++ S+L T Sbjct: 1082 QIAERITVERVSENAESRLSVTI 1104 >UniRef50_A4C536 Exonuclease SbcC n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C536_9GAMM Length = 1232 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 242/914 (26%), Positives = 389/914 (42%), Gaps = 22/914 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSLKGEWKIDFT+ PFA+NGLFAITGPTGAGKTTLLDAIC+ALYH TPR Sbjct: 1 MRILSLRFKNINSLKGEWKIDFTQPPFANNGLFAITGPTGAGKTTLLDAICMALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L+ +S++ N+LMTR TAE LAEVEFEVKG+ YRAFWSQ R+R +GNLQ +VELA+ + Sbjct: 61 LNAISKTSNELMTRGTAESLAEVEFEVKGQGYRAFWSQRRSRGSSEGNLQEAKVELAKIS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG ILA ++K K + ++TGLD+ RFT+SM+LSQGQFAAFLNA P ERAELLEELTGTE Sbjct: 121 DGSILASQIKQKNQQIESITGLDFARFTKSMMLSQGQFAAFLNADPNERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V + A+ L +L+AQA GV LL+ E + + + LT + Q Sbjct: 181 IYGLISEQVHIEFSQAKQALAELKAQAQGVELLSEEALATYKSQQSELTLTLQNAEAEQT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q L WL + + Q + Q + +A + Q QL LS ++PA LRP ++ Sbjct: 241 TLQTQLTWLKQYQQAQSVLTDLQLQVTKAEQALLEHQSQLTRLSNSEPAELLRPAYQVYQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFR 359 +H + Q+ + + + + L + QQ + + Sbjct: 301 DHKNQADKLIAQLASLESVTAKQQLAVQLQQTQHDEAKIRLLELQQQQQQQDKLLNEEVI 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD---------E 410 + E + +Q +D E + QL + L A + A Sbjct: 361 PLDLELKSIVSDLTQNQTDLEQYIKQHNQLNTDTEALQAQQQNIVEKLAQCDKYLALHHA 420 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + + Q +VA H + + R+ + Q+ + V ++ Q L Q + Sbjct: 421 DEQLASLLPRWQDQLQQVVANHELLADKSARINEQQLQLNKVVEQAKQAATELTIATQTH 480 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRAQLQ---------AGQPCPLCGSTSHPAVEAYQ 521 + Q+ + E T+ + + +Q P L A + Sbjct: 481 SQNEQKQLSQQQALEHLLGQHTVASLQDSVQNMQQQQILSQQLPPILQRLKRCLAQKQQL 540 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 ++ ++ + ++++L R Q++ + + ++++ A + Q Q Sbjct: 541 SISIEQATAQTAQCDQQLQQLRTTYKLQREQINLLEQLQRQEQQIADFTQARLQLQPDQA 600 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + S L Q + + + L++ + QI + Q + Sbjct: 601 CPLCGSCEHPLINEYRALDVNINQSKLNQAKQQLAEIEQQANQIKEQKAVAVAMHLQHAE 660 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 + L+T + Q ++ + L + + + + L + Sbjct: 661 QYTQLITDIEQLQQNWHQINQSLA-LNLLWDDEVQLTEYLAQQQQALMSSKTLITQAQQF 719 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA- 760 + + E + + Q L ++K Q Sbjct: 720 ESALKQSLLNTQASFEKVKDIKHQHALLEQTITQQHAAITQQGTEIEKNQQLLHKQSTQL 779 Query: 761 -SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGL 819 S D L L + +T + K Q++ + +T + + + Sbjct: 780 SSELDKLGLVLPDLAEIETWYNHQHAKVAQWQQQQMQKKTLTDNQQKIQLQVTEKTTQLH 839 Query: 820 ALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED 879 LT ++ ++AQ + + + + K + Q + Q +QV Sbjct: 840 QLTKLLDDYSSKIAQQMASQAQLQHKRQALFGEQKVETARSAMTQHVQQSQQLFDEQVNA 899 Query: 880 WGYLNSLIGSKEGD 893 L S +G+ Sbjct: 900 LNQLTQQWQSAQGE 913 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 247/868 (28%), Positives = 374/868 (43%), Gaps = 13/868 (1%) Query: 188 MVFEQHKSARTELEKLQAQASGVTLL--TPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 + L+ L E +Q+ ++ + + + ++Q Sbjct: 365 ELKSIVSDLTQNQTDLEQYIKQHNQLNTDTEALQAQQQNIVEKLAQCDKYLALHHADEQL 424 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA 305 + L R + Q+ + L A + Q QL + Sbjct: 425 ASLLPRWQDQLQQVVANHELLADKSARINEQQLQLNKVVEQAKQAATELTIATQTHSQNE 484 Query: 306 LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEP 365 + QQ + Q T+A + +Q QQ L + + +Q + Sbjct: 485 QKQLSQQQALEHLLGQHTVASLQDSVQNMQQQQILSQQLPPILQRLKRCLAQKQQLSISI 544 Query: 366 AGWRAQFSQQTSDREHLRQWQQ-QLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPL 424 AQ +Q + LR + Q + L Sbjct: 545 EQATAQTAQCDQQLQQLRTTYKLQREQINLLEQLQRQEQQIADFTQARLQLQPDQACPLC 604 Query: 425 RQHLVALHGQIVPQ-----QKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 L + Q +L Q + + + Q+ Q + + +Q Sbjct: 605 GSCEHPLINEYRALDVNINQSKLNQAKQQLAEIEQQANQIKEQKAVAVAMHLQHAEQYTQ 664 Query: 480 VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEV 539 + T EQ + Q L + + + + + + Sbjct: 665 LITDIEQLQQNWHQINQSLALNLLWDDEVQLTEYLAQQQQALMSSKTL----ITQAQQFE 720 Query: 540 KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQ 599 L + + + + + Q++ Q A+TQQ + + + + + Sbjct: 721 SALKQSLLNTQASFEKVKDIKHQHALLEQTITQQHAAITQQGTEIEKNQQLLHKQSTQLS 780 Query: 600 PWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQ 659 LD L + + Q A QQ ++ + QQ + +T L Q Sbjct: 781 SELDKLGLVLPDLAEIETWYNHQHAKVAQWQQQQMQKKTLTDNQQKIQLQVTEKTTQLHQ 840 Query: 660 EDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 + +++ + + Q + Q++ + Q + + Sbjct: 841 LTKLLDDYSSKIAQQMASQAQLQHKRQALFGEQKVETARSAMTQHVQQSQQLFDEQVNAL 900 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 Q+ +Q + +Q+ LQQQ + Q ++ L SVF D +FLAAL+ + Sbjct: 901 NQLTQQWQSAQGEQKGLQQQLLQLQSDTLAHQTYWNEVLSNSVFADLDSFLAALLPQDQK 960 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 QL+QLKQ+L+ ++ +A L+TQ T QH + +Q+ ++L QK Sbjct: 961 QQLQQLKQDLQTEQTKAVALLTQANNTFEQHL-LDAQSPTWCDLDWQQLSEQLHHIQQKE 1019 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 RE G+I+Q L+ D R Q L ++IA + +D YL+ LIGS++GDKFRKFA Sbjct: 1020 RELVEQTGQIKQALQDDQKRRLNQTHLFEKIALCQIEYDDLAYLHGLIGSQKGDKFRKFA 1079 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 QGLTLD+LV+LAN+QL RLHGRYLL+RK SEALE++V+DTWQ D+VRDT+TLSGGESFLV Sbjct: 1080 QGLTLDHLVYLANKQLARLHGRYLLERKPSEALELQVLDTWQGDSVRDTKTLSGGESFLV 1139 Query: 960 SLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA 1019 SLALALALSDLVSHKT IDSLFLDEGFGTLD ETLD ALDALD L+ASGKTIGVISH++A Sbjct: 1140 SLALALALSDLVSHKTSIDSLFLDEGFGTLDRETLDMALDALDNLHASGKTIGVISHIDA 1199 Query: 1020 MKERIPVQIKVKKINGLGYSKLESTFAV 1047 MKERI VQI+VKK NGLGYS+L +A Sbjct: 1200 MKERIAVQIEVKKQNGLGYSRLAPQYAF 1227 >UniRef50_Q8KDA7 Exonuclease SbcC n=1 Tax=Chlorobaculum tepidum RepID=Q8KDA7_CHLTE Length = 1222 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 204/916 (22%), Positives = 358/916 (39%), Gaps = 41/916 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I LR NLNSL+GEW+IDFTR + S+GLFAITGPTG+GK+T+LDAICL LY +TPR Sbjct: 1 MIIQKLRFANLNSLQGEWEIDFTRPEYLSDGLFAITGPTGSGKSTILDAICLGLYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++S N++M R + +C AEV F AYR WSQ+R+R++ G LQ + E++ Sbjct: 61 LGRITKSSNEIMARHSGDCFAEVTFATASGAYRCHWSQHRSRHKRGGELQSQKHEISDAV 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ++ K+++ L+ TG+D+ RFTRSMLL+QG F AFL A +RA +LE++TGT+ Sbjct: 121 TGALIQTKLQETLQEVEARTGMDFDRFTRSMLLAQGAFTAFLQADADQRAPVLEQITGTK 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ + LE+LQ + G+ LL E+ ++L ++E++L + Sbjct: 181 IYSVISMKVHERRRDELARLERLQLECEGIRLLGDEERRALETERAECIEKERELNAGVE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 E + WL L+ + AE E + L LA+ A + P + + Sbjct: 241 TESAAQRWLQEIARLEAALAAIGSEAAALDAEREAFRTDEERLRLARSAAAVEPQYAVLK 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A L +++ L Q+S+ + + RQ Sbjct: 301 LKRAQLRRDSEELAAKEAGRPKMEQRWLEAEAQHEATEKALASAQESVTSARPLIAQVRQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA- 419 + G R + ++ + E L + + +L +A A HA Sbjct: 361 LDAVIEGKRQEAERRKRELEALEERRGRLDAERAAASASVESARNGLQKLRAWQTEHHAD 420 Query: 420 ---------------EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 E P + A+ I Q+ + QL+ I + E AA + Sbjct: 421 ASLVGALSGIRHAFDELHPAAERERAVASGIASVQQAIGQLRDEIAKIELESKASQAAFD 480 Query: 465 EMRQRYKEKTQ---QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 E R+ E+ D T+ + L +R L+ G P + Sbjct: 481 EARKALDERKASFTARLDGSTLKALRVELDLLRDRRHLLEEIVALYKSGKELLPKITELG 540 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQ-- 579 A + A + E + A + L R + +SL ++ + L Sbjct: 541 ANIETLESEEADATRKL--EHARELLAHAEREAAAQENLARMADRVRSLEEERRRLVAGQ 598 Query: 580 -------QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLL----SQRHELQGQIAAH 628 + + + A E+ R +R L ++R Q+ Sbjct: 599 PCPLCGSEHHPYVEEQVLPESDEAALDVAKRAVQEYSRSVRELEISVAERRTEIEQMRQW 658 Query: 629 NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ 688 + ++ ++ LL A E LA +++ + R +L L+ Sbjct: 659 RDDLAAMRETSGRQCLALLEKAGVEAPAKEAEPVVLENLAENKRKVEELAGRIEQLDVLE 718 Query: 689 NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 RI+ L+ L ++ ++ R L +++ Q + Q L+ Sbjct: 719 QRIRDDEARLQQLNEAARSDKRRLEQAVDQQRVNRFDLDRLEREREAAQCELAERRQLLR 778 Query: 749 KAQA----QFDTALQASVFDDQQAFLAALMDEQTL-TQLEQLKQNLENQRRQAQTLVTQT 803 + + S+ + +A A E+ LE+ + E R + Sbjct: 779 RLVEPYGVAVGDEIAESLVAELEARRDAWRREEERGRSLEESLRIGEVSLRNVAEQIAAL 838 Query: 804 AETLAQHQQHRPDDGLALTVTVEQIQQELAQT--HQKLRENTTSQGEIRQQLKQDADNRQ 861 LA ++ + + ++ ++ + + + R +L ++ Sbjct: 839 DADLAMRREEVEAAFAGVETSKKERRELFGEKLPDAEEERLESLVQAARDRLAASSERFN 898 Query: 862 QQQTLMQQIAQMTQQV 877 + + + ++ Sbjct: 899 AARQALAVLDTSIAEL 914 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 189/907 (20%), Positives = 338/907 (37%), Gaps = 42/907 (4%) Query: 162 LNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL 221 L AK R ++ + E + + + + T L AQ + + + Q Sbjct: 313 LAAKEAGRPKMEQRWLEAEAQHEATEKALASAQESVTSARPLIAQVRQLDAVIEGKRQEA 372 Query: 222 TASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLA 281 + L E++ + + + Q+ Q + Sbjct: 373 ERRKRELEALEERRGRLDAERAAASASVESARNGLQKLRAWQTEHHADASLVGALSGIRH 432 Query: 282 ALSLAQPARNLRPHWER-IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAE 340 A PA IA A+ +R +I ++ +++ A R ++ A Sbjct: 433 AFDELHPAAERERAVASGIASVQQAIGQLRDEIAKIELESKASQAAFDEARKALDERKAS 492 Query: 341 LQQQQQ--SLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNA 398 + +L E D R + A + + + + E + Sbjct: 493 FTARLDGSTLKALRVELDLLRDRRHLLEEIVALYKSGKELLPKITELGANIETLESEEAD 552 Query: 399 LAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAI--------- 449 T + LA + +++L + ++ ++ +L Sbjct: 553 -----ATRKLEHARELLAHAEREAAAQENLARMADRVRSLEEERRRLVAGQPCPLCGSEH 607 Query: 450 ----------QNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 ++ A+ E + +E +A+ +T EQ + + A + Sbjct: 608 HPYVEEQVLPESDEAALDVAKRAVQEYSRSVRELEISVAERRTEIEQMRQWRDDLAAMRE 667 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 Q L A N + E+ E+ L ++ + Sbjct: 668 TSGRQCLALLEKAGVEAPAKEAEPVVLENLAENKRKVEELAGRIEQLDVLEQRIRDDEAR 727 Query: 560 LQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRL----- 614 LQ+ A+S ++ + Q + L+ + + Q L + + R+L Sbjct: 728 LQQLNEAARSDKRRLEQAVDQQRVNRFDLDRLEREREAAQCELAERRQLLRRLVEPYGVA 787 Query: 615 --LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQ 672 L ++ A + +++ ++ L Q ++ LA R++ Sbjct: 788 VGDEIAESLVAELEARRDAWRREEERGRSLEESLRIGEVSLRNVAEQIAALDADLAMRRE 847 Query: 673 EAQSWQQRQNELTALQNRI---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 E ++ + + + E L + E + + L Sbjct: 848 EVEAAFAGVETSKKERRELFGEKLPDAEEERLESLVQAARDRLAASSERFNAARQALAVL 907 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 + L++ + +++ +A+F AL F D+ AF+AA + E +LE +L Sbjct: 908 DTSIAELRRAVEEEREEVERREAEFGAALAGKGFADEAAFVAACLPEAERERLESAATSL 967 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 E+++R + L + R A +++ + + +LR+ G I Sbjct: 968 EHRKRDLDLKRSDREARLRDELERRLTTLSA-----DELAVRIGELQAQLRDVQGRVGAI 1022 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 +L+ + ++ M + + W L+SLIGS +G KFR FAQG+T + ++ Sbjct: 1023 ASRLEAHRQAADEHRSKMAAVEAQKAECRRWEMLHSLIGSADGKKFRNFAQGITFEIMIA 1082 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 AN+QL R+ RY+L S ALE+ V+D WQA VR TR LSGGESF+VSLALAL LS Sbjct: 1083 HANKQLMRMTDRYVLLHDLSGALELSVIDQWQAGEVRSTRNLSGGESFIVSLALALGLSQ 1142 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 + S +DSLFLDEGFGTLD E L+TAL L L SGK IG+ISHV A+++RI IK Sbjct: 1143 MSSRNVSVDSLFLDEGFGTLDEEALETALKTLGTLQQSGKLIGIISHVPALRDRIATHIK 1202 Query: 1030 VKKINGL 1036 V + G Sbjct: 1203 VTPLTGG 1209 >UniRef50_Q5E5N3 Exonuclease, dsDNA, ATP-dependent n=3 Tax=Aliivibrio RepID=Q5E5N3_VIBF1 Length = 1226 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 232/894 (25%), Positives = 388/894 (43%), Gaps = 21/894 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSL NLNSLKGEWKIDF+ PFA NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTTILDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S S N++MTR TAEC AEVEFEVKG+AYRAFWSQ R+R + DGNLQ VELA Sbjct: 61 LGGISTSSNEIMTRGTAECSAEVEFEVKGKAYRAFWSQRRSRGKVDGNLQAATVELAEVD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA +VK K EL T+TGLD+ RFT+SM+LSQGQFAAFLNA +RA LLEELTGTE Sbjct: 121 SEKVLATQVKKKDELINTITGLDFSRFTKSMMLSQGQFAAFLNADANDRAGLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS V E + +++ +L +L+A+A GV LL+ E Q+L L +KQ Sbjct: 181 IYGQISEKVHEHYTASKQKLAELKAKAEGVELLSEEDKQALIDEQTELQANQKQQQAQLV 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + Q + W + + QQ+ + + Q AL +E++A L L+ ++PA LR ++ Sbjct: 241 EWQAHVEWWNAEVKNQQQHQQAIEHHQLALDKEKQASEPLHRLAQSEPAEKLRAPYQLWQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFR 359 E + +++ Q + + ++ H + + T D + Sbjct: 301 EAQERFDEVVKELSLTEVSHQQKTSDKLTLESHVTQLKQVFDDIKVESKTLEALINDSVQ 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + + + Q ++ + HL ++ +Q L + A + + Sbjct: 361 PLDTKISQLTQQSQEKQQNIAHLTTRYEESYKKQQHLTVTLSDVTETLAQLTSYVEKHQS 420 Query: 420 EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLAD 479 + L GQ Q ++Q + + + T A L+ + +K +L Sbjct: 421 DV-----QLERYLGQWKRQVSYISQQDKEVSALNSKVTSAKATLDALLANMTKKETELHQ 475 Query: 480 VKTICEQEARIKTLEAQRAQ--LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + + + E Q + G L + +E + L Sbjct: 476 AQVVVKTEVDALKAAELVLQQSQEKGTEAQLAEQVAALTNRHQYRVELTHVNNEYLRAIK 535 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD---EQALTQQWQAVTASLNITLQP 594 E++ L T ++ + Q ++ + L Q L +Q + ++ Sbjct: 536 ELQTLEMMQKTQSSEIQTLEAQRAELGSQFKQLEQQVIDLTTLIEQEGELAKYRAELMKD 595 Query: 595 LDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 D E+ L + + Q+ + +Q + ++ L + Sbjct: 596 QDCPLCGSTHHPLLEQSQSL--DLNATMQRKKEAEQKRAEIVEQGKSVREQLDSLKVKQE 653 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQN------ELTALQNRIQQLTPILETLPQSDELP 708 Q + ++ + + QQ+ + + + + I + +L L + + Sbjct: 654 HCQSQCVQFQNIVKSTQQQWSTLLEATQLTLNLGDTDTINQSITECEALLTALNEQVKQV 713 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 + + Q+ + L + L+ + + Q L+ D + Sbjct: 714 RQADEKYRAHQNQLQQAQHRLDTVTAGLEYDRKSHQVA-AQLQLDDSVKLEQLQQHDAEL 772 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 + + + +E+ Q + + + + +++ QQ L + Sbjct: 773 KQQLVAEIEQTGFNAPKLAEIESWFTQKEQDLQRIQQQISE-QQRFIQQQQKLQSEHGHL 831 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 ++L++ +L+ + L+Q R + + + ++ V+ G Sbjct: 832 SEQLSELTNQLKTTQAENVLLTSDLEQQKAKRVELFGMQEVKVARSEMVKKLGD 885 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 271/930 (29%), Positives = 424/930 (45%), Gaps = 97/930 (10%) Query: 209 GVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQ 268 + E+ + L + +Q + + + + L + + + S+ +AL Sbjct: 297 QLWQEAQERFDEVVKELSLTEVSHQQKTSDKLTLESHVTQLKQVFDDIKVESKTLEALIN 356 Query: 269 ALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRA 328 + + + +N+ R E H+ + +V L + Sbjct: 357 DSVQPLDTKISQLTQQSQEKQQNIAHLTTRYEESYKKQQHLTVTLSDVTETLAQLTSYVE 416 Query: 329 SIRH--HAAKQSAELQQQQQSLNTWLQEHDRFR-QWNNEPAGWRAQFSQQTSDREHLRQW 385 + + + ++Q ++ +E + + A A + T L Q Sbjct: 417 KHQSDVQLERYLGQWKRQVSYISQQDKEVSALNSKVTSAKATLDALLANMTKKETELHQA 476 Query: 386 Q----QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKR 441 Q ++ + L T ++A +A + R L ++ + + K Sbjct: 477 QVVVKTEVDALKAAELVLQQSQEKGTEAQLAEQVAALTNRHQYRVELTHVNNEYLRAIKE 536 Query: 442 LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQ 501 L L++ + + E A E+ ++K+ QQ+ D+ T+ EQE L RA+L Sbjct: 537 LQTLEMMQKTQSSEIQTLEAQRAELGSQFKQLEQQVIDLTTLIEQE---GELAKYRAELM 593 Query: 502 AGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQ 561 Q CPLCGST HP +E Q+L+ R E + ++ E+G ++R QLD++ + + Sbjct: 594 KDQDCPLCGSTHHPLLEQSQSLDLNATMQRKKEAEQKRAEIVEQGKSVREQLDSLKVKQE 653 Query: 562 RDENEAQSLRQDEQALTQQWQAVTASLNITL---------QPLDDIQPWLDAQDEHERQL 612 +++ + ++ QQW + + +TL Q + + + L A +E +Q+ Sbjct: 654 HCQSQCVQFQNIVKSTQQQWSTLLEATQLTLNLGDTDTINQSITECEALLTALNEQVKQV 713 Query: 613 RLLSQRHELQGQIAAHNQ-----------------------------QIIQYQQQIEQRQ 643 R +++ Q ++ Q QQ + + Sbjct: 714 RQADEKYRAHQNQLQQAQHRLDTVTAGLEYDRKSHQVAAQLQLDDSVKLEQLQQHDAELK 773 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQR--------------QNELTALQN 689 Q L+ + P+ E ESW ++Q+ Q QQ+ Q+E L Sbjct: 774 QQLVAEIEQTGFNAPKLAEIESWFTQKEQDLQRIQQQISEQQRFIQQQQKLQSEHGHLSE 833 Query: 690 RIQQLTPILETLPQSDELPHCEETVV---------------------------------- 715 ++ +LT L+T + L + Sbjct: 834 QLSELTNQLKTTQAENVLLTSDLEQQKAKRVELFGMQEVKVARSEMVKKLGDSEQRYQAG 893 Query: 716 LENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 + + ++ + + +L+Q + + + AL S F+ + F AAL+ Sbjct: 894 QQKLQIRVQELAVIEGKLTSLKQSHANNDKLTAERSGVWKEALLHSPFETLELFQAALIS 953 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT 835 E+ QL LK ++ + L+ +T QH Q L + ++ ELAQ Sbjct: 954 EEERQQLLDLKTEIQQAIERTSALLDSAKQTKEQHYQMPKATEWQLMPK-DTVESELAQV 1012 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKF 895 +GEI Q L+ D + + Q+TL + I + +D YL+SLIGS++GDKF Sbjct: 1013 KSISESLVKREGEIAQALRSDDERKTNQKTLFEAIEAYQSEYDDIQYLHSLIGSQKGDKF 1072 Query: 896 RKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGE 955 RKFAQGLTL+NLV+LAN+QLTRLHGRY L+RKAS+ LE++V+DTWQ D VRDT+TLSGGE Sbjct: 1073 RKFAQGLTLENLVYLANKQLTRLHGRYELKRKASDGLELQVLDTWQGDVVRDTKTLSGGE 1132 Query: 956 SFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVIS 1015 SFLVSLALALALSDLVSHKT IDSLFLDEGFGTLDSETLD ALDALD LNASGK IGVIS Sbjct: 1133 SFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLDMALDALDNLNASGKMIGVIS 1192 Query: 1016 HVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 H+EAMKERIPVQIKV K +GLG S+LE + Sbjct: 1193 HIEAMKERIPVQIKVTKRSGLGVSELEKQY 1222 >UniRef50_C7BK95 Nuclease sbccd subunit c n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BK95_PHOAA Length = 1229 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 303/951 (31%), Positives = 454/951 (47%), Gaps = 92/951 (9%) Query: 184 QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQ 243 Q+ + + A L + + +Q++ + LQ + Sbjct: 279 QLQKLANSEPAEALRPLLDDKNRTQSEHQKISKQLEDMRQQLQQQQQILTPIQQKVTNAD 338 Query: 244 QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHS 303 + + Q+ Q + + L + + ++ + Sbjct: 339 SVREAHQQHRQQQETLISEQVIPLDHQIDIQIKDLNLTQQHINEQKAEFETANQQYNAAN 398 Query: 304 AALAHIRQQIEEVNTRLQST--MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQW 361 + Q +++ + Q + LQ+QQQ +N W Q+ D+ Sbjct: 399 QHSLSLTSQRKQLENYFEQQPHHQYFGEKMTFWQHQFSWLQEQQQHINQWTQKADKLTTE 458 Query: 362 NNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQ 421 + + QQ ++ + Q EQ L + + +++ ++ ++ Sbjct: 459 LTQFND--SLNKQQKDLKQQIENSQPLKLAFEQAEQQLFNLQKQYSQEKLKKQFIEYQQK 516 Query: 422 RPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK 481 L+ L L QI+ Q +A + +Q + + + + ++ EK Q L D+ Sbjct: 517 LTLQHKLEVLSPQILQLQATIANNNLRLQQPEKLLKELPIQIEAVNKQLSEKQQHLEDLS 576 Query: 482 TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKK 541 + E +I +LE +RAQL+ G PCPLCGS HPA++AYQ +E ++ RL L + ++ Sbjct: 577 QRIQLEQKIVSLEKERAQLKEGDPCPLCGSEHHPAIQAYQHIELPKSEQRLKDLRQQSEQ 636 Query: 542 LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD----- 596 L +L + + +Q E +L QQWQ + L I + PLD Sbjct: 637 LQTTKISLVNKKEFQQQQYNHILQEIADAEPQLNSLAQQWQQICEILQIEISPLDKPALE 696 Query: 597 -------------------------DIQPWLDAQDEHERQLRLLSQRHEL-QGQIAAHNQ 630 + Q H+ ++ + +R EL + Q A + Sbjct: 697 AFVQQNQSAYQLSQTQLTEFELAEKEYQKTEKTLTVHKEHIKEIERRVELDKQQYDARKK 756 Query: 631 QIIQYQQQIEQRQ-------QLLLTTLTGYALTLPQEDEEESWLATRQQEA-------QS 676 + + Q +I+Q+Q + + + L Y L LP ++ E+WL R+ E ++ Sbjct: 757 YLSELQPEIQQQQCKLTDVIEKIRSELQEYDLLLPMLNDAENWLQQRKHEWKIYQNCREN 816 Query: 677 WQQRQNELTALQNRIQQLTPILET------------------------------------ 700 WQQ Q E +QN+ + L E Sbjct: 817 WQQLQKEQAVVQNQTESLNKQKEEYASRLNILHQKEQQQKQQLEKAQQQRQALFGEQSVA 876 Query: 701 -----LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 L Q + E L + +Q L ++ A Q A+ F+ Sbjct: 877 KITQALQQHSQKLEEEYQQALSHLQQAQSHINQLTGAIYETEKNRSQAEYQRQLAEQNFN 936 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 + L+ S+F +Q F AAL+ + +L QLK+ LE Q+ QA+TL + AETL QH ++RP Sbjct: 937 SVLEKSIFANQSIFEAALLPPEQRKELRQLKEQLEQQQVQAKTLCQKAAETLQQHMKNRP 996 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 T Q+ ++L + ++L++NT QGE+R L DA RQQQ++L+++I Q Sbjct: 997 KLLDQYTKP--QLIEQLKNSTEELKKNTLQQGELRNLLSNDATRRQQQKSLLEEIDHCRQ 1054 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 +DW YLN+LIGS +G KFR+FAQGLTLD+LVHLANQ+L +LHGRY LQRK + LE++ Sbjct: 1055 NYDDWSYLNNLIGSADGAKFRRFAQGLTLDHLVHLANQRLEKLHGRYYLQRKNCDGLELQ 1114 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 V+DTWQADA+RDT+TLSGGESFLVSLALALALSDLVS+KT I+SLFLDEGFGTLD ETLD Sbjct: 1115 VIDTWQADAIRDTKTLSGGESFLVSLALALALSDLVSNKTCINSLFLDEGFGTLDPETLD 1174 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 ALDALD+LNASGKTIGVISHVEAMKERIPVQIKVKKINGLG SKL F Sbjct: 1175 IALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKINGLGISKLAPEFR 1225 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 271/934 (29%), Positives = 417/934 (44%), Gaps = 29/934 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSL+GEWKIDFT EPFASNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLQGEWKIDFTTEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG AYRAFWSQ RARNQPDGNLQ P+VELA Sbjct: 61 LMTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPDGNLQTPKVELAYKE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GKILADK++DK E +TGLDYGRFT+SMLLSQG FAAFLNAK ERA+LLEELTGTE Sbjct: 121 NGKILADKIQDKEEKVTEITGLDYGRFTKSMLLSQGDFAAFLNAKANERADLLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S ++ QHK A++ELE LQ +AS + LLT EQ Q Q L + E QL + Sbjct: 181 IYGVLSQQIYLQHKEAQSELEILQVKASAIDLLTKEQHQQYLEQQQQLANCELQLNQQIK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +Q S WLTR++ELQ+ + +LQQA A+PQL L+ ++PA LRP + Sbjct: 241 TQQYSEQWLTREEELQKFLTENNASLQQAEKALTHAEPQLQKLANSEPAEALRPLLDDKN 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF-- 358 + I +Q+E++ +LQ + I+ + + QQ Sbjct: 301 RTQSEHQKISKQLEDMRQQLQQQQQILTPIQQKVTNADSVREAHQQHRQQQETLISEQVI 360 Query: 359 ---RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVAT-- 413 Q + + + QQ A Q +L + L Sbjct: 361 PLDHQIDIQIKDLNLTQQHINEQKAEFETANQQYNAANQHSLSLTSQRKQLENYFEQQPH 420 Query: 414 ----------ALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 Q + + +QH+ + L Q ++ ++ Q+ Sbjct: 421 HQYFGEKMTFWQHQFSWLQEQQQHINQWTQKADKLTTELTQFNDSLNKQQKDLKQQIENS 480 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ-- 521 ++ +++ QQL +++ QE K + +L + Sbjct: 481 QPLKLAFEQAEQQLFNLQKQYSQEKLKKQFIEYQQKLTLQHKLEVLSPQILQLQATIANN 540 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 L + L L +++ + ++ + + L+ +++++Q ++ ++ Q Sbjct: 541 NLRLQQPEKLLKELPIQIEAVNKQLSEKQQHLEDLSQRIQLEQKIVSLEKERAQLKEGDP 600 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + S + ++ + + Q + + + Q I Q Sbjct: 601 CPLCGSEHHPAIQAYQHIELPKSEQRLKDLRQQSEQLQTTKISLVNKKEFQQQQYNHILQ 660 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L A Q E + + + + + + Q E Sbjct: 661 EIADAEPQLNSLAQQWQQICEIL-QIEISPLDKPALEAFVQQNQSAYQLSQTQLTEFELA 719 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 + + TV E+ +++ + Q ++ +Q+ Q + ++ Sbjct: 720 EKEYQKTEKTLTVHKEHIKEIERRVELDKQQYDARKKYLSELQPEIQQQQCKLTDVIEKI 779 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLE---------NQRRQAQTLVTQTAETLAQHQQ 812 + Q+ L M L+Q K + Q ++ Q +V E+L + ++ Sbjct: 780 RSELQEYDLLLPMLNDAENWLQQRKHEWKIYQNCRENWQQLQKEQAVVQNQTESLNKQKE 839 Query: 813 HRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQ 872 L +Q +Q+L + Q+ + Q + +++ ++ Q ++ Sbjct: 840 EYASRLNILHQKEQQQKQQLEKAQQQRQALFGEQSVAKITQALQQHSQKLEEEYQQALSH 899 Query: 873 MTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 + Q L I E ++ + Q + Sbjct: 900 LQQAQSHINQLTGAIYETEKNRSQAEYQRQLAEQ 933 >UniRef50_B5VUC1 SMC domain protein n=4 Tax=Cyanobacteria RepID=B5VUC1_SPIMA Length = 1044 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 195/1078 (18%), Positives = 390/1078 (36%), Gaps = 87/1078 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L LKN S + +DF+ A I GP GAGK++LL+AI +++ + Sbjct: 19 MIPQKLTLKNFLSYRDA-SLDFSGLHTA-----CICGPNGAGKSSLLEAIAWSIWGHS-- 70 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +++DL+ + + F G YR ++ R ++ P + Sbjct: 71 ---RAGTEDDLIQIGETQMRVDFIFISHGNLYRVIRTRRRGQSGTLDFQIAPLEPDKKAE 127 Query: 121 DGKILA---DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELT 177 K A V+ + LDY F S L QG+ F+ +P +R E+L L Sbjct: 128 QIKFTALSQGGVRSTQQKILEHLRLDYDTFINSAYLRQGKADEFMLKRPSDRKEVLGSLL 187 Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLIT 237 + Y + + K + ++E+L+ + + L +++ + A + L +L Sbjct: 188 KLDEYDTLVEKAKDISKEYKFKIEQLEQTLT-IGELETQKLPEIVAQMTQLEATLGKLQK 246 Query: 238 AQQQEQQSLNWLTRQDELQQEASRR-----------QQALQQALAEEEKAQPQLAAL--- 283 Q+ EQ+ L Q + +Q + +Q + E Q QL L Sbjct: 247 QQESEQKQLQAYREQQQYRQTCEQLLEGQRQQYHGIKQECDRLQQEIIVTQTQLQQLDCI 306 Query: 284 -SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 + ++ + ++ Q +++ +L+ + H + ++ Sbjct: 307 RQQQEEINAGIVEFQTLQATEETMSLQFQTHQKIQQQLRELQQQQQDKIHQLQRDKDTIE 366 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAI 402 + +SL+ QE+ + E AQ Q L + Q ++T Q+ + Sbjct: 367 TRLESLHKQEQEYQKVLVEQPEVEAGMAQLFQARLRLNELDKLQIEVTPILQEHQRIQGE 426 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAA 462 A A + ++ L ++ + + L Q I+ Q + A Sbjct: 427 IDRAQARLSARFDELYTSMHKMQNRLENNRPKLEQELQNLHQTIEEIEKKRTYQNRVTAK 486 Query: 463 LNEMRQRYKEKT-QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQ 521 ++ QQ + E + +++ L ++ G P+C P E + Sbjct: 487 GQSRHNHLEKLAHQQQEYESKLAELDKKMEMLGRSFSEENRGDSAPVCPLCDRPLDEHHW 546 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 L G +Q++ + + + + E+ A ++ A+ + + + + + L +Q Sbjct: 547 NLVMGKHQNQQQEIRDRLWIIREDLARSEQEIAALRVEYTTLQRQISN----YEELREQR 602 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + A L +Q W D + ER L S L Sbjct: 603 GQLQARLEGFGSDELQLQQWGDEASQIERSLSDGSHSATL-------------------- 642 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETL 701 L L L + D E A + E + W+ + + +++ Q+L + Sbjct: 643 -----YQQLQQLDLQLQELDYNEQSHALARNEEKRWRWAEMKQIQIRDSQQKLGQLQADK 697 Query: 702 PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQAS 761 P ++ + L + L++Q + +L+ +A Sbjct: 698 PPMVAQLQSALDQII-----YLQTASELQQRIIQLKKQLNESGYNLEDHNQVRVRLREAQ 752 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + + E Q++Q L Q ++ ++ + +D Sbjct: 753 --QWVRKAEQLKVAESQYPQIQQRLTELRQ-LNQVRSQDLSGVKSQILLLTKQLEDTPNP 809 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 + + ++ ++ Q Q+L + + G+++QQ + QQQ Q++++ Q + Sbjct: 810 RLYISNLEGKIKQQRQQLDQYLSQLGKLQQQRIHLENLSQQQSQQKQELSEYRHQALIYK 869 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG-----RYLLQRKASEALE--- 933 L G + + L L NQ L RL +++ QR Sbjct: 870 ELAQAFG---KNGIQALMIENVLPQLEAETNQILARLSANQLHVQFVTQRSGRSGSAKRK 926 Query: 934 ----VEVVDTWQADAV--RDTRTLSGGESFLVSLALALALSDLVSHKTR--IDSLFLDEG 985 ++ +D ADA R T SGGE+F ++ A+ LAL+ L++ + + L +DEG Sbjct: 927 KAKLIDTLDILIADARGTRPYETYSGGEAFRINFAIRLALAKLLAQRAGCALQMLIIDEG 986 Query: 986 FGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 FGT D+E D + A++A+ I ++H+ +KE +I+V K L Sbjct: 987 FGTQDAEGCDRLIAAINAIAPDFSCILAVTHIPHLKEAFQAKIEVTKTATGSQLHLSV 1044 >UniRef50_A5Z5M9 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5M9_9FIRM Length = 934 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 125/871 (14%), Positives = 297/871 (34%), Gaps = 54/871 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ + L + IDF + + GL+ ITG TGAGKTT+ DAI LY ++ Sbjct: 1 MRPIKLIISAFGPYAECETIDFEK--LGNKGLYLITGDTGAGKTTIFDAITYVLYGKSSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQ--PDGNLQVPRVELAR 118 + S + ++EFE + + Y + R + +G Sbjct: 59 KTRSSSMLRSKYAKPDVPTFVKMEFEYRNKKYVIERNPEYERPKIHGEGTTTQGANATLI 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D + L GLDY +FT+ +++Q F L A ER ++ ++ Sbjct: 119 YPDKDTPVTGSSNVTVAINELIGLDYEQFTQIAMIAQNDFLKLLLADTDERRKIFSKIFN 178 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T Y ++ + ++ K R ++ + K Sbjct: 179 TYPYEKLQLKLGDEAKRLRRLVDDQNKSIGQYIDGIRCGDSFVARQQLEAIKNNKTENGI 238 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + + +L + + R ++AL++ +K ++ + A+ + + Sbjct: 239 ENTIDFIEELINNDQDLLKVINERIIKTEKALSDVDKKLVEVNRDNSAKKQK--LNAEQF 296 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 I + L + +++E ++++Q+Q + + + D Sbjct: 297 IESNKPNLEVLEKRVELCKEEEPVRKE-----------LEYKIKEQEQLMPRYDKLFDTE 345 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 +++ NE + + S+ S + + + L ++ L L L Sbjct: 346 KEYVNELKLIKTKGSEFESLCKDIENLNKVLATNKENLQKLKDADAVLV-----KIENAK 400 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 ++++L + Q + + +L++ Q + NE Sbjct: 401 TGYDNVKKNLSNIINQCNDYEGKNHELELLQQRAIKANDSWETKSNE------------- 447 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 E+ + L+ G+PC +CGST HP ++ ++ + + + +N+ Sbjct: 448 --CAAVEKTFLNQQAGILAGNLRDGEPCIVCGSTVHPNP--FKLMDKQITEKMVEDAKNK 503 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 V +L + + +++ + ++ + L+ I Sbjct: 504 VNELKAIATNYSNKAGMQKGIVDTL----------YESIVENFRNLKEIFKEVLEE-RAI 552 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 D + + +L + + + +Q ++QIE++ + Sbjct: 553 NTVSDIKAWSDEKLVKVEEAISKNNGYYEIAKNNVQVKEQIEKQISETEEQINNNNNKKD 612 Query: 659 QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLEN 718 + + S L + +E ++ E Q+R + L L + + T L + Sbjct: 613 ILNSDISNLKIKNRENAILLEQLREKLEFQSR-KDAESNLNQLKINLSELENKATQALNS 671 Query: 719 WRQVHEQCLALHSQQQTLQQQDVLAAQ-SLQKAQAQFDTALQASVFDDQQAFLAALMDEQ 777 + + + ++ +T+++Q + L++ ++ + + + Q ++ E Sbjct: 672 YDKCKKSIDDANATIKTIEEQLKDSKNYDLEQLISESNKLQEEKKAVNNQRNDVSIRIEI 731 Query: 778 TLTQLEQLKQNLENQRRQAQTLV--TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQT 835 LE +K NL + A+T + + L V + ++ + + Sbjct: 732 NTGALENIKTNLNKLVTTEEKYKWVNALAQTANGNINGKSKIALETYVQISYFERIINRA 791 Query: 836 HQKLRENTTSQGEIRQQLKQDADNRQQQQTL 866 + + + T Q E+++ + D + L Sbjct: 792 NLRFMKMTNGQYELKRSTESDDQRSKTGLEL 822 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 112/721 (15%), Positives = 258/721 (35%), Gaps = 35/721 (4%) Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 L+ + N +D++ L+ +++ E+ L+ + + + Sbjct: 223 RQQLEAIKNNKTENGIENTIDFIEELINNDQDLLKVINERIIKTEKALSDVDKKLVEVNR 282 Query: 409 DEVATALAQHAEQ-RPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 D A +AEQ + + + + V K ++ ++ +EQ Q +++ Sbjct: 283 DNSAKKQKLNAEQFIESNKPNLEVLEKRVELCKEEEPVRKELEYKIKEQEQLMPRYDKLF 342 Query: 468 QRYKEKTQQLADVKTI-CEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 KE +L +KT E E+ K +E L + + ++ Sbjct: 343 DTEKEYVNELKLIKTKGSEFESLCKDIENLNKVLATNKE-----NLQKLKDADAVLVKIE 397 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA-VT 585 ++ ++ + + + G+ + QR S + + Sbjct: 398 NAKTGYDNVKKNLSNIINQCNDYEGKNHELELLQQRAIKANDSWETKSNECAAVEKTFLN 457 Query: 586 ASLNITLQPLDDIQPWLDAQD-------EHERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 I L D +P + + + + + ++ Y + Sbjct: 458 QQAGILAGNLRDGEPCIVCGSTVHPNPFKLMDKQITEKMVEDAKNKVNELKAIATNYSNK 517 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 ++ ++ T E + ++ + + ++++ Sbjct: 518 AGMQKGIVDTLYESIVENFRNLKEIFKEVLE-ERAINTVSDIKAWSDEKLVKVEEAISKN 576 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 + + + + + + EQ ++++ L ++ + Sbjct: 577 NGYYEIAKNNVQVKEQIEKQISETEEQINNNNNKKDILNSDISNLKIKNRENAILLEQLR 636 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 + F ++ + L Q L +L+ + A + Sbjct: 637 EKLEFQSRKDAESNLN--QLKINLSELENKATQALNSYDKCKKSIDDANATIKTIEEQLK 694 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 + +EQ+ E + ++ + + ++ +++ + + +T + ++ ++ + Sbjct: 695 DSKNYDLEQLISESNKLQEEKKAVNNQRNDVSIRIEINTGALENIKTNLNKLVTTEEKYK 754 Query: 879 DWGYLNSL----IGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQR------- 926 L I K + Q + +++ AN + ++ G+Y L+R Sbjct: 755 WVNALAQTANGNINGKSKIALETYVQISYFERIINRANLRFMKMTNGQYELKRSTESDDQ 814 Query: 927 KASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLD 983 ++ LE+ V+D + RD RTLSGGESF SL+LAL LSD + + +ID+LF+D Sbjct: 815 RSKTGLELNVIDHYNG-TERDVRTLSGGESFKASLSLALGLSDEIHCAAGGIKIDTLFVD 873 Query: 984 EGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKIN-GLGYSKLE 1042 EGFGTLD ++L++A++AL+ L + +G+ISHV+ +K RI +I V K +E Sbjct: 874 EGFGTLDEDSLNSAIEALNTLTEGDRLVGIISHVQELKTRIDRKIIVSKNKVKGSKVAVE 933 Query: 1043 S 1043 Sbjct: 934 I 934 >UniRef50_B3QNJ6 SMC domain protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QNJ6_CHLP8 Length = 1226 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 195/914 (21%), Positives = 350/914 (38%), Gaps = 37/914 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR NLNSL+GEW+IDFTR + ++G+FAITGPTG+GK+T+LDAICLALY ETPR Sbjct: 1 MKILTLRFANLNSLQGEWQIDFTRPEYVADGVFAITGPTGSGKSTILDAICLALYGETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++ S N++M+R EC AEV F +R WSQ+R+R +P G LQ + E+A A Sbjct: 61 LGKITVSSNEIMSRHAGECFAEVTFAAASGTFRCTWSQHRSRKKPGGALQAQKHEIADAA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G I+ +V++ TG+D+ RFTRSMLL+QG FA FL A +RA +LE++TGTE Sbjct: 121 TGAIIQSRVQETRLEVEARTGMDFDRFTRSMLLAQGDFAKFLQADADQRAPVLEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E+ ++ L++L+ + G+ LL E++ +L A ++E ++ + + Sbjct: 181 IYSLISMKVHERKRAELERLQRLEIEVGGIRLLGAEELAALEAERSEALEQEAKMSASLE 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + +L WL L++ + + + E E L AQ A + + + Sbjct: 241 SDSAALRWLEEIARLEEAVAANSREAEALNTEREAFAADARRLERAQTAALIEVAYAEVR 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 L ++ + + + QQ+L RQ Sbjct: 301 LMREELQRNAGELAGKEVQHPESERAVREAGEAFEAAERGVASAQQALQDGRPLIAHARQ 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + + AG + + D E L + Q QL +++ + A + Sbjct: 361 LDEQIAGKSGEVERLQHDAETLEERQAQLRSERAEVSTALGSIRIALQNLQAWQNQHQTD 420 Query: 421 ---------QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 R L + V + Q ++ + E A + + Sbjct: 421 ASLAGALSGIRHALDELRPAAEREVAAASGITDTQHNLEVLQGELVLAEADARASQSAFD 480 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQL--QAGQPCPLCGSTSHPAVEAYQALEPGVNQ 529 + L +K + +L + R +L + L + A + Sbjct: 481 DARMALGKMKESFALQLDGASLSSLRGELDRLRERHRQLEAIVALYAEGKQFVPKIDKIW 540 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA--- 586 + E ++L + R L+ + L + E L ++L ++ + + Sbjct: 541 VEIQQTERRQEELSLKFDHARQLLEHAERDL-VSQEELARLADRVRSLEEERERLVDGQP 599 Query: 587 --------------SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ-GQIAAHNQQ 631 + + + + + E + L+ L +I + Sbjct: 600 CPLCGSPSHPWADGASELLERSQEALHEARRIVQERSKALKELELALAKTGTEIDERRKS 659 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEE---ESWLATRQQEAQSWQQRQNELTALQ 688 + + + E + L L + +P + E E L + + R +L L+ Sbjct: 660 LQELAELRESSGRKCLALLKEVGVNVPAREAEPVVEEALQQTASQRDALAGRIEQLETLE 719 Query: 689 NRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 RI+ + L ++ V E R + L + QQ +S Sbjct: 720 QRIRDHEADVAQLNETAHTAQRRLEQVTERQRSLLLDLARLKKELGLAQQNVAERQRSFS 779 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + F + A + E+ + LE + Q+ + + LA Sbjct: 780 RLVEPFGVREIDDP---AEIVSALALRSTEWASNEKRIRTLEQEELAGQSRLKNLDDQLA 836 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + + V ++ ++ L+ + E + + R + L + Sbjct: 837 TISADFLEKDRDVKAAVTSLEALKSKRAGVLQGHDPDVEE-ERLERTLQAARTKLDELTE 895 Query: 869 QIAQMTQQVEDWGY 882 + + + Sbjct: 896 KRNAAREALSVLET 909 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 178/871 (20%), Positives = 328/871 (37%), Gaps = 46/871 (5%) Query: 198 TELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQ 257 +L++ A SG ++L L E ++ TA + +L L Q Sbjct: 359 RQLDEQIAGKSGEVERLQHDAETLEERQAQLRSERAEVSTALGSIRIALQNLQAWQNQHQ 418 Query: 258 EASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN 317 + AL ++ +P A + + L Sbjct: 419 TDASLAGALSGIRHALDELRPAAER--EVAAASGITDTQHNLEVLQGELVLAEADARASQ 476 Query: 318 TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS 377 + ++ A LQ SL++ E DR R+ + + A +++ Sbjct: 477 SAFDDARMALGKMKESFA-----LQLDGASLSSLRGELDRLRERHRQLEAIVALYAEGKQ 531 Query: 378 DREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 + + ++ E++ L +L D L ++ L L ++ Sbjct: 532 FVPKIDKIWVEIQQTERRQEEL-----SLKFDHARQLLEHAERDLVSQEELARLADRVRS 586 Query: 438 QQKRLAQL--------------------QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 ++ +L ++ + + + E + KE L Sbjct: 587 LEEERERLVDGQPCPLCGSPSHPWADGASELLERSQEALHEARRIVQERSKALKELELAL 646 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 A T ++ + A+ + + L + + + Sbjct: 647 AKTGTEIDERRKSLQELAELRESSGRKCLALLKEVGVNVPAREAEPVVEEALQQTASQRD 706 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 + E+ TL ++ + + A + ++ + +T++ +++ L + L Sbjct: 707 ALAGRIEQLETLEQRIRDHEADVAQLNETAHTAQRRLEQVTERQRSLLLDLARLKKELGL 766 Query: 598 IQPWLDAQDEHERQL------RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 Q + + +L R + E+ +A + + +++I +Q L + Sbjct: 767 AQQNVAERQRSFSRLVEPFGVREIDDPAEIVSALALRSTEWASNEKRIRTLEQEELAGQS 826 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQN---RIQQLTPILETLPQSDELP 708 Q + + ++ ++ L + + + E L ++ + Sbjct: 827 RLKNLDDQLATISADFLEKDRDVKAAVTSLEALKSKRAGVLQGHDPDVEEERLERTLQAA 886 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQA 768 + + E E L + L Q L++ + F L+ F + Sbjct: 887 RTKLDELTEKRNAAREALSVLETAIAGLHQALQERRLVLERREEAFTLELKQKGFIGEAV 946 Query: 769 FLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQI 828 FL A + +LEQ +L + + + + L + ++ + E++ Sbjct: 947 FLEARLPIGERQKLEQKADSLNKRAHELEARRKERQTKLHEVRERQLTSESN-----EKL 1001 Query: 829 QQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIG 888 + +A+ ++LRE G I QL+++ + + + + + W L+ LIG Sbjct: 1002 SERIARRQEQLREVRGRIGAIANQLRENEQAAGEHRIKLHAVEAQKSEYRRWELLHDLIG 1061 Query: 889 SKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDT 948 S +G KFR FAQG+T + ++ AN+QL ++ RY L + LE+ V+D WQA VR T Sbjct: 1062 SVDGKKFRNFAQGITFELMISHANRQLRQMTDRYQLLHDPNNPLELSVIDQWQAGEVRST 1121 Query: 949 RTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASG 1008 R LSGGESF+VSLALAL LS + S R+DSLFLDEGFGTLD E L+TALD L L SG Sbjct: 1122 RNLSGGESFIVSLALALGLSQMSSRNVRVDSLFLDEGFGTLDEEALETALDTLAGLQQSG 1181 Query: 1009 KTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 K IGVISHV A++ERI I+V G S Sbjct: 1182 KLIGVISHVAALRERISTHIRVAPKTGGRSS 1212 >UniRef50_A1BG58 SMC domain protein n=2 Tax=Chlorobium RepID=A1BG58_CHLPD Length = 1224 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 209/1034 (20%), Positives = 401/1034 (38%), Gaps = 94/1034 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KNLNSL GEW IDF+ + S+G+FAITGPTG+GK+T+LDAI LALY +TPR Sbjct: 1 MKILSLRFKNLNSLVGEWFIDFSAPEYVSDGIFAITGPTGSGKSTILDAISLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V+ S N++M+R T EC AEV FE +R W+Q+RAR P G LQ + E+A Sbjct: 61 LEKVNSSTNEIMSRHTGECFAEVVFETGTGRFRCHWAQHRARRHPLGILQAQKHEIADAL 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+++ K++D L+ TG+D+ +FTRSMLL+QG FA FL + P ERA +LE++TGT Sbjct: 121 TGRVIETKLQDTLQAVVERTGMDFDQFTRSMLLAQGGFAVFLQSPPDERAPVLEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V E++++ + ELE L+ + SG+ LL + +Q+ A LQ DEE +I Q Sbjct: 181 IYSAISVKVHERNRAEQQELETLRVECSGIILLDDDALQAAKAELQAKLDEEAGIINRQS 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + + SL WL + ++ E + + ++ + + LA+ A P + I Sbjct: 241 EAEASLRWLRQILVMKGELADMESDFEKLELSDRDFSGDRERMELARRAAGFEPAYMIIR 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + ++ L+ + +L+ + R Sbjct: 301 QQQELQDRELREKSGAEHELERLNTDFTEHTERFREAEQKLEIFKGQEKELSMVVREVRA 360 Query: 361 WNNEPAGWRAQFSQQTSDREHL---------------RQWQQQLTHAEQKLNALAAI-TL 404 + +G R Q + ++ + L R+ +Q+ T AE + LA T Sbjct: 361 LDIRISGKREQCDEMAAEIKALCERISASDSIICGIKREMEQERTEAEDSESYLAEHGTD 420 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 + A ++ A + + + + K + + N E + A + Sbjct: 421 SRLAASLSGIEALVLQYEEAQAEERDAGVLLAERHKLFENAKTLLLNFQPETVRAGEAFD 480 Query: 465 EMRQRYKEKTQQLA-------------DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS 511 + R R++E + LA V+ + E+ ++ L + A + + + Sbjct: 481 QSRFRWEELSATLASLLQGTDISNLRMAVQELEERSRNLEILSVRIAAMAEREKRIVTLR 540 Query: 512 TSHPAVEAYQA------LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAIT-------- 557 + PA+++ Q+ + Q + + +++ E +R D Sbjct: 541 ETLPAIDSVQSRVAEEIDRLVLLQEKAEQVVEALQREAELYLKIRSLEDERKVLLYGSPC 600 Query: 558 ----------------------KQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 ++LQ + + + AL + + + Sbjct: 601 PLCGSRHHPWADGAVPEPSAEGEELQHAKASVLEISEKITALRIEAAGAIKDRAHNEEQI 660 Query: 596 DDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL 655 +++ L +D R L + + + + + E+ + L + Sbjct: 661 AELRILLSGEDAVCRNLAVQLEIAGDLNA-EQVLRLLSEAHCAAEKEAERLGKAILLEKQ 719 Query: 656 TLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVV 715 L E E + + ++ ++ + E+ +++ + + + Sbjct: 720 LLFSESEAQRLHRLFTEAVRAEEKAEYEVKTAGMEVERAMDVQRKIQERKAAIRESLNRE 779 Query: 716 LENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMD 775 + + V + + L + ++ ++ + + Q + + Sbjct: 780 YDGYGIVPQAARSCRDVLLILHSRLERWHRANERRTSAYQRIAILEGNLKMQEEM-LMTR 838 Query: 776 EQTLTQLEQLKQNLENQRRQAQTLV---------TQTAETLAQHQQHRPDDGLALTVTVE 826 + + E+L + L + LA + D T E Sbjct: 839 KGEHAEKEKLLAACTAEFTTLNELRIARFGEKNPDEEEHRLAIMLKCSEVDLDGARRTCE 898 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQ------------------QTLMQ 868 ++ Q ++ +S E ++++ Q+ + ++ Sbjct: 899 AASTQILQLSTRIAMLASSLTERAMKIREKEALFLQELSESGFDGMGGFVSSRLDREELE 958 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKA 928 Q+ Q + + + + K R +N ++L L GR + R Sbjct: 959 QLEQQAKDLAARRLELETLRGERQYKLRMEEDRALTENSPEELQEELDALFGRLDIVRSD 1018 Query: 929 SEALEVEVVDTWQA 942 + ++++ + + QA Sbjct: 1019 TASVKLHLYEHEQA 1032 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 192/922 (20%), Positives = 342/922 (37%), Gaps = 103/922 (11%) Query: 207 ASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL 266 L +++ + + L ++ +++ L ++E S + + Sbjct: 299 IRQQQELQDRELREKSGAEHELERLNTDFTEHTERFREAEQKLEIFKGQEKELSMVVREV 358 Query: 267 QQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMAL 326 + + Q + A ++ ERI+ + + I++++E+ T + + + Sbjct: 359 RALDIRISGKREQCDEM-----AAEIKALCERISASDSIICGIKREMEQERTEAEDSESY 413 Query: 327 RAS--IRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT-SDREHLR 383 A A + ++ E E + + Sbjct: 414 LAEHGTDSRLAASLSGIEALVLQYEEAQAEERDAGVLLAERHKLFENAKTLLLNFQPETV 473 Query: 384 QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQH----LVALHGQIVPQQ 439 + + + + L+A +L + L ++ R L + ++ Sbjct: 474 RAGEAFDQSRFRWEELSATLASLLQGTDISNLRMAVQELEERSRNLEILSVRIAAMAERE 533 Query: 440 KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ 499 KR+ L+ + + Q++ ++ + ++ Q + ++ E +I++LE +R Sbjct: 534 KRIVTLRETLPAIDSVQSRVAEEIDRLVLLQEKAEQVVEALQREAELYLKIRSLEDERKV 593 Query: 500 LQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQ 559 L G PCPLCGS HP EP L + V ++ E+ LR + K Sbjct: 594 LLYGSPCPLCGSRHHPW-ADGAVPEPSAEGEELQHAKASVLEISEKITALRIEAAGAIKD 652 Query: 560 LQRDENEAQSL--------------------------RQDEQALTQQWQAVTASLNITLQ 593 +E + L Q + L++ A + Sbjct: 653 RAHNEEQIAELRILLSGEDAVCRNLAVQLEIAGDLNAEQVLRLLSEAHCAAEKEAERLGK 712 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQG-----------QIAAHNQQIIQYQQQIEQR 642 + + L ++ E +R RL ++ + ++ + Q++ Sbjct: 713 AILLEKQLLFSESEAQRLHRLFTEAVRAEEKAEYEVKTAGMEVERAMDVQRKIQERKAAI 772 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 ++ L GY + L + W + T+ RI L L+ Sbjct: 773 RESLNREYDGYGIVPQAARSCRDVLLILHSRLERWHRANERRTSAYQRIAILEGNLKMQE 832 Query: 703 QSDELPHCEETVVLENW------------------------------------------- 719 + E + Sbjct: 833 EMLMTRKGEHAEKEKLLAACTAEFTTLNELRIARFGEKNPDEEEHRLAIMLKCSEVDLDG 892 Query: 720 -----RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 Q L L ++ L A +++ +A F L S FD F+++ + Sbjct: 893 ARRTCEAASTQILQLSTRIAMLASSLTERAMKIREKEALFLQELSESGFDGMGGFVSSRL 952 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQ 834 D + L QLEQ ++L +R + +TL + L +D + E++Q+EL Sbjct: 953 DREELEQLEQQAKDLAARRLELETLRGERQYKL-----RMEEDRALTENSPEELQEELDA 1007 Query: 835 THQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDK 894 +L + ++ L + + + + W L+ LIGS +G K Sbjct: 1008 LFGRLDIVRSDTASVKLHLYEHEQAAVMLREKTIALVARQIECSRWSLLHELIGSSDGKK 1067 Query: 895 FRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGG 954 FR FAQGLT + +VH AN+QL + RYLL R LE+ V+D +Q +R T+ LSGG Sbjct: 1068 FRNFAQGLTFEIMVHHANRQLMNMTDRYLLVRDVQRPLELNVIDNYQGGEIRSTKNLSGG 1127 Query: 955 ESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVI 1014 ESFLVSLALAL LS + S +DSLFLDEGFGTLD + L+TAL L L+ SGK IG+I Sbjct: 1128 ESFLVSLALALGLSQMSSRNVSVDSLFLDEGFGTLDEDALETALQTLAGLHESGKLIGII 1187 Query: 1015 SHVEAMKERIPVQIKVKKINGL 1036 SHV ++ERI +I+VK +NG Sbjct: 1188 SHVPVLRERIGTRIEVKPLNGG 1209 >UniRef50_D1NTD8 Exonuclease SbcC n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NTD8_9BIFI Length = 1224 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 187/1227 (15%), Positives = 381/1227 (31%), Gaps = 190/1227 (15%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 K++ L + + + +D R + N +F I G TG+GK+ +LDA+ ALY + L Sbjct: 4 KLIGLCFEGIGPYASAFSLDLAR--LSRNHMFLIEGCTGSGKSMILDALVFALYGDVSSL 61 Query: 62 SNVSQSQN---DLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVE--- 115 + + + E ++ FE G+ Y + + G Sbjct: 62 NGGEEKARLRSRFLDHSRRETSVKLVFENNGDYYYVHRTPKYMVPKQSGTGATEHKPSGT 121 Query: 116 -----------------------------------LARCADGKILADKVKDKLELTATLT 140 + + L +V + + Sbjct: 122 LLKVAPHMRDAFESLVDRHMVADTDEHSADEYFEFCEHADNAEPLCVQVGAVGTMIEQIV 181 Query: 141 GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTEL 200 GL+ +F ++++L QGQF+ FL KP+ER+ ++++L Y +I + + ++ Sbjct: 182 GLNRQQFCQTVILPQGQFSRFLRLKPEERSSMVKDLFAAADYERIQHELRDMRLERGAQV 241 Query: 201 EKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEAS 260 + + + S D E + ++ + + Sbjct: 242 ATRRTRLESAIATARDAALRCLNSTDADLDAEAGAMDCAAAVVEAQAQSEAAARDAERDA 301 Query: 261 RRQQALQQALAEE--------------EKAQPQLAALSLAQPARNLRPHWERIAEHSAAL 306 ++ + L ++ + A + +E+ L Sbjct: 302 LARECVDNLLDSLLPAGDSTQVAPTDCDEFAADHGHSAQDAAADVIESPYEQSTPIGDNL 361 Query: 307 AHIRQQ-------------------------IEEVNTRLQSTMALRASIRHHAAKQSAEL 341 A R E+VN + + H Q A+ Sbjct: 362 ADERAWCVDVDGALLEPAMDVAAIEHQLTHVAEQVNAHAEEQHDRTSGQLHERETQVAQA 421 Query: 342 QQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAA 401 Q L Q NE AQ + R + + Q + A+ A Sbjct: 422 QHVHDQLQQITSVLQDIAQTVNEQHELAAQSPRMDQLRAWIERSNQAKPVSILHYQAIEA 481 Query: 402 ITLTLTADEVATALAQHAEQRPL-------RQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 L + E A+ Q +I ++ + + + Sbjct: 482 ARLQHESGEELQAVDQQIATLTEPYGGIDGLHAAHDELNRIAQREPAIVAGLELVVEKER 541 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 + Q + ++ + E RI L Q +++ + T Sbjct: 542 KLAAVAQTKARTEQLAADLQAAEDHYRSCVDDEQRIGALGNQVERIEHYEQLLEARGTRE 601 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE-----AQS 569 ++ Q L +++ + + + + + +L + Sbjct: 602 RELQDAQTLVSDWDET--DRMREALLDAQARLHDAQSRRAQVRGRLDAALQDRLVVGLVQ 659 Query: 570 LRQDEQALT-------QQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ 622 + + + + + + E RL ++ E Sbjct: 660 IADQLEPGQPCPVCGSLEHPKLAQMREASTAGGATEHVTNAEINYREELERLRAEHDEAL 719 Query: 623 GQIAAHNQQIIQYQQQIEQR--------QQLLLTTLTGYALTLPQEDEEESWLATRQQEA 674 +A Q+ + Q ++++ ++ + + + +E + LA +Q A Sbjct: 720 AGESAQQIQVTRMQTRLDELTAAIAGRSREQAIQWRDEAQRAVNESNEARAHLAQARQIA 779 Query: 675 QSWQQRQNELTALQNRIQQLTPIL-------------------ETLPQSDELPHCEETVV 715 + + + ++ + + + +L E L E Sbjct: 780 KQIVEVREQVQHAKEKAETTAAMLDTEHQHYQAAQQAAQGLEPEALQAERSRLEQERHDA 839 Query: 716 LEN------WRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAF 769 L+ + E+ ALH ++ L + + A A+F A + + F D + Sbjct: 840 LQAAGQLPGLQNTIERVSALHKERTLLATKLAERTAVSEHANAEFLRACKEAGFADGTSA 899 Query: 770 LAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH------------------- 810 AA++ + L + + +R + Q LA Sbjct: 900 AAAVLSDVDLDHYAGQLKEYDERRAALASQAHQLRTQLAILLSPESVSSLRLALPTALYI 959 Query: 811 --QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + A + ++++ L + Q + +Q A+ + Sbjct: 960 SDEARETAILAAASASLQRATATLHEAQASRDAAIRDQQSAMECWEQCANANRTMLAEAS 1019 Query: 869 QIAQMTQQVEDWGYLNSLI------GSKEGDKFRKFAQGLTLDNLVHLANQQLTRL-HGR 921 Q AQ E + L+ G++ +A +++ AN L + G Sbjct: 1020 QWAQAMHAYEPLRRMAELVTGGRDSGAERKTTLITYAVTERFRDVLARANDLLRDIRDGY 1079 Query: 922 YLLQRKASE---------------------ALEVEVVDTWQADAVRDTRTLSGGESFLVS 960 Y L+ + L + + D + D D TLSGGE F VS Sbjct: 1080 YELRLGDQDNESADGTMSVNAPRMRANHKTGLPILIYDR-RCDTCADPDTLSGGERFFVS 1138 Query: 961 LALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHV 1017 LALALAL+D++ + R+++LF+DEGFG+L ++ LD +D L+ + S +TIG+ISHV Sbjct: 1139 LALALALADIIEGENGGVRMETLFIDEGFGSLSADVLDEVMDVLEEVGRS-RTIGIISHV 1197 Query: 1018 EAMKERIPVQIKVKKINGLGYSKLEST 1044 ++ ERI I V + G S + Sbjct: 1198 GSLVERIGDCIMVSREREDGPSTISVR 1224 >UniRef50_B4RWA1 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=B4RWA1_ALTMD Length = 1238 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 231/900 (25%), Positives = 367/900 (40%), Gaps = 15/900 (1%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 LRLKNLN+LKGEWKIDFT+ PF NGLFAITGPTGAGKTTLLDAICLALYH+TPRL +S Sbjct: 3 LRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPRLGPIS 62 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKIL 125 S ND+MTR TAECLAEVEF++KG+AYRAFWS RAR + DGNLQ VELA G +L Sbjct: 63 TSNNDIMTRGTAECLAEVEFDIKGKAYRAFWSMRRARGKVDGNLQSADVELAEVESGDVL 122 Query: 126 ADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQI 185 A +V+ K E LTGL++ RFT+SM+LSQG FAAFLNA +RAELLEELTGTEIYGQI Sbjct: 123 ATQVRPKNEEIEKLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTEIYGQI 182 Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 S V +Q A+ + ++ + GVTLL+ EQ+ L + + + QQ Sbjct: 183 SQAVHQQFSEAKQKKKEFAIKLEGVTLLSNEQITQLEEDQDGINGQVAAFNQTLTELQQQ 242 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA 305 W + ++A A ++A+ +L L+ ++PA LR + + Sbjct: 243 QQWQQSFNTNALALKEAKEAQLAANNAIDEAKQELNVLTHSEPAEKLRLPFLQRNGLQQD 302 Query: 306 LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFRQWNNE 364 L+ ++++ E +L + + L Q +Q + + ++ +N Sbjct: 303 LSGYKEKLNEKAAQLPELKTQKEQLSSEVTNAERALLQTKQQSSELEKRINEQVVPLDNN 362 Query: 365 PAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL--TADEVATALAQHAEQR 422 A A + + LT ++ +A + + Sbjct: 363 IAQSTAAQQKANDSAAQFTRSINALTKKRTEIENASADNKKKLGELEAYLNENHSLSSMA 422 Query: 423 PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT 482 I +QK++A L+ + Q + + A+ + Q K TQ + Sbjct: 423 EFISGWSETARHIESEQKQIATLKQSAQEHRHALSSIDEAITQTNQALKTLTQTFDNATA 482 Query: 483 ICEQ-EARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKK 541 E + + + A L ++ G Q + LALE + Sbjct: 483 NVATCEEALNAALSNADKNSATSKTSLQQERDTKLHHWDNLIQIGHIQQQYLALEQDKVS 542 Query: 542 LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPW 601 L + L +L Q + + R + + + + A+ A + L +P Sbjct: 543 LSAQKEDLSKKLAQQQSDRQALVDAYKQTRSNLKDI-EALIALDAEVAHLRAQLKSGEPC 601 Query: 602 LDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED 661 + E + + +Q+ +QQ Q ++ + T Q D Sbjct: 602 PVCGANEHTTASVAIDIPETVQKRDSLKEQLDDIEQQGAQAKESVTHTELTLTQVNKQLD 661 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 + + ++ + + + L I + QS + L++ Sbjct: 662 QTNAKRDALVEKWKQFS------SVLSADISSFEKVDINTSQSVAQFTEQFKTRLDDISA 715 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ 781 + T Q A Q+LQ Q+ ++Q ++Q E Sbjct: 716 QLTRIEQCEQALNTAMQSKNEAQQALQAKQSDVAVSMQRRETLEKQLTERNAEVENKTKG 775 Query: 782 LEQLKQNLENQRR----QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQ 837 + L + L + T + + +EL + + Sbjct: 776 VNDSIATLRETMTAHGAEVHNLPIEGIATWLNEEAEALKTYKHNHQLHTNLNEELQEVSR 835 Query: 838 KLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRK 897 L QLK ++ Q + + ++ + V G ++ + + + Sbjct: 836 TLLVLNRDIESAETQLKSVSEELMQLDSTLIELRKSRMAVFPEGNISEVRSKASAAQVQA 895 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 231/936 (24%), Positives = 398/936 (42%), Gaps = 62/936 (6%) Query: 169 RAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVL 228 + +L E+ + + +A L + + Q+S + EQV L ++ Sbjct: 307 KEKLNEKAAQLPELKTQKEQLSSEVTNAERALLQTKQQSSELEKRINEQVVPLDNNIAQS 366 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQD-ELQQEASRRQQALQQALAEEEKAQPQLAALS--- 284 T +++ + Q +S+N LT++ E++ ++ ++ L + A + + Sbjct: 367 TAAQQKANDSAAQFTRSINALTKKRTEIENASADNKKKLGELEAYLNENHSLSSMAEFIS 426 Query: 285 -LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 ++ AR++ ++IA + R + ++ + T ++ +A + Sbjct: 427 GWSETARHIESEQKQIATLKQSAQEHRHALSSIDEAITQTNQALKTLTQTFDNATANVAT 486 Query: 344 QQQSLNTWLQEHDRFRQWNN------------------EPAGWRAQFSQQTSDREHLRQW 385 +++LN L D+ + + + Q+ D+ L Sbjct: 487 CEEALNAALSNADKNSATSKTSLQQERDTKLHHWDNLIQIGHIQQQYLALEQDKVSLSAQ 546 Query: 386 QQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIV--------- 436 ++ L+ + + + + + L L + L Q+ Sbjct: 547 KEDLSKKLAQQQSDRQALVDAY-KQTRSNLKDIEALIALDAEVAHLRAQLKSGEPCPVCG 605 Query: 437 --------------PQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT 482 ++ L+ + ++ Q+ Q ++ + +QL Sbjct: 606 ANEHTTASVAIDIPETVQKRDSLKEQLDDIEQQGAQAKESVTHTELTLTQVNKQLDQTNA 665 Query: 483 I-----CEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALEN 537 + + L A + + + + +R+ E Sbjct: 666 KRDALVEKWKQFSSVLSADISSFEKVDINTSQSVAQFTEQFKTRLDDISAQLTRIEQCEQ 725 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDD 597 + + + L A + ++L + + + T +N ++ L + Sbjct: 726 ALNTAMQSKNEAQQALQAKQSDVAVSMQRRETLEKQLTERNAEVENKTKGVNDSIATLRE 785 Query: 598 IQPWLDAQDE---HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYA 654 A+ E L++ E ++Q +++++ + LL Sbjct: 786 TMTAHGAEVHNLPIEGIATWLNEEAEALKTYKHNHQLHTNLNEELQEVSRTLLVLNRDIE 845 Query: 655 LTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETV 714 Q L ++ + + ++ + + + + Sbjct: 846 SAETQLKSVSEELMQLDSTLIELRKSRMAVF----PEGNISEVRSKASAAQVQAEQKLSE 901 Query: 715 VLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALM 774 Q L ++ L +Q Q+L +A F+ L S F D+QAF AL+ Sbjct: 902 CQSRLHQTDTILSRLEAEIAQLNEQIREKEQALTEATENFNRQLANSPFADEQAFSNALL 961 Query: 775 DEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV---EQIQQE 831 DE+T +L +L++ L Q++QA + T + + ++ + Sbjct: 962 DEETRNKLLELQKQLTQQKQQADLKLENALATQQSLTARDHAQQWQRKLEEHGMQWVENQ 1021 Query: 832 LAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKE 891 + + Q+ ++ G+I+QQL + + R++Q+TL++++A +D YL+SLIGS Sbjct: 1022 ITEQAQQKDALLSTLGQIKQQLNANNEAREKQRTLVEEMAAFETYYDDITYLHSLIGSAS 1081 Query: 892 GDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTL 951 GDKFR+FAQGLTLDNLV LANQQL +LHGRY L RK ++ L + V+DTWQ D VRDT+TL Sbjct: 1082 GDKFRRFAQGLTLDNLVQLANQQLEKLHGRYQLIRKENDGLGLSVLDTWQGDVVRDTKTL 1141 Query: 952 SGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 SGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLD+ETLD ALDALD LNASGK I Sbjct: 1142 SGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDVALDALDNLNASGKMI 1201 Query: 1012 GVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 GVISH+EAMKERIP Q+KV K NG+G S LE +AV Sbjct: 1202 GVISHIEAMKERIPTQLKVIKRNGVGLSALEKPYAV 1237 >UniRef50_Q12L91 SMC protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12L91_SHEDO Length = 1265 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 261/901 (28%), Positives = 392/901 (43%), Gaps = 25/901 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT PF NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKDEWKIDFTLSPFKENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S+S N+LMTR T LAEVEFEVKG+AYRAFWSQ R+R+ DGNLQ +VELA Sbjct: 61 LSVISKSTNELMTRGTGSALAEVEFEVKGKAYRAFWSQRRSRDLADGNLQDAQVELAELE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G ILA ++K K EL ++TGLD+ RFTRSMLLSQG FAAFLNA ERAELLEELTGTE Sbjct: 121 SGVILASQIKQKTELVESITGLDFARFTRSMLLSQGDFAAFLNASANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY IS V + + L L+ Q V LL+ E+ ++ AS L + Q Sbjct: 181 IYSLISERVHLEFGEQKHRLNLLKVQLDSVKLLSAEEREAKLASALALKETLAQKQQQLL 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 L W Q + +Q LQ A + QL L+ ++PA+ L P +ER Sbjct: 241 ALVDCLTWCDAMQAQTQLVEQSEQGLQAAEEAIRDEKNQLQRLADSEPAQGLAPLFERKQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD-RFR 359 + S + +Q+ E+ +L S + + + L ++Q+ D + + Sbjct: 301 QLSQQHQALDKQVAELGQQLVSAQQTLKELSEQQSAAATALIVEKQAQQALHHLIDTQVQ 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 + A R + +Q + R + +L H + A TL E++T L+Q+ Sbjct: 361 PLEQKLAQSRFKLTQCQQALDKSRTTEDELNHELSAVQARKQDL-TLEIKELSTLLSQYP 419 Query: 420 EQRPLRQHL---VALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN-EMRQRYKEKTQ 475 + + L + L Q++ +++ +L + + + Q T L +Q + + Sbjct: 420 QGQALGEQLSGWKTQVAQLIELEQQRGELDIQQRQLQQSSTLCKQNLETNQQQLTQAQQV 479 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA------VEAYQALEPGVNQ 529 Q+ + A+I L + R Q Q C + H E Y+ L + Sbjct: 480 QINASHLLAATTAQINELLSGREIHQLQQEYQQCLDSQHGRSELAKTFEQYRKLYATWLE 539 Query: 530 SRLLALENEVKKLGEEGATLRGQLDAITKQLQ------RDENEAQSLRQDEQALTQQWQA 583 A ++ ++ + + +L K Q E D + Q Sbjct: 540 LTQKAADDALQTIELTSELAKVRLQWRDKNQQVKDVTGLLSQEKHISSLDAERAKLQPGE 599 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A PL ++ D +RQ +LL + +L+ N + + + E Q Sbjct: 600 PCALCGSIEHPLVSEYQGINVSDTEQRQQKLLQELEQLKLAGEGLNLALSKLELSWEHTQ 659 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQS---WQQRQNELTALQNRIQQLTPILET 700 Q L ++ + L E W++ + A N LE Sbjct: 660 QQLTHCISEQQELRNHWHALFAQLGLSLNEFALPAPWRRASDGDKASINPGVNEAAYLEA 719 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 L + T + Q + +Q+ T + A Q+ + D Sbjct: 720 LESQLRSFIVKATEEQHKLSECITQLSGMQNQEATELKALQQAEAQAQRLVSARDVLSAE 779 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 Q + Q + L QNL + Q + + +++Q Sbjct: 780 QCNITQGIEEQIRRINRLEEQQQMLIQNLNTECGQFGVTLPARESSASEYQ----HWLNE 835 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 L+ ++Q + Q K ++ Q +Q NR Q +T QQ+ + +++ Sbjct: 836 LSANLQQWRLAQQQLILKQQQLEVLQQSSSSISQQLNKNRTQIETDKQQLMTIEAELKAL 895 Query: 881 G 881 Sbjct: 896 N 896 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 237/885 (26%), Positives = 381/885 (43%), Gaps = 32/885 (3%) Query: 192 QHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEE------KQLITAQQQEQQS 245 Q + A + + + + + Q LT ++ L+ + L + Sbjct: 375 QCQQALDKSRTTEDELNHELSAVQARKQDLTLEIKELSTLLSQYPQGQALGEQLSGWKTQ 434 Query: 246 LNWLTRQDELQQEASRRQQALQQ------ALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + L ++ + E +Q+ LQQ E + Q A + L +I Sbjct: 435 VAQLIELEQQRGELDIQQRQLQQSSTLCKQNLETNQQQLTQAQQVQINASHLLAATTAQI 494 Query: 300 AEHS--AALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR 357 E + ++Q+ ++ L + + + L+ Q++ + LQ + Sbjct: 495 NELLSGREIHQLQQEYQQCLDSQHGRSELAKTFEQYRKLYATWLELTQKAADDALQTIEL 554 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQ--QQLTHAEQKLNALAAITLTLTADEVATAL 415 + WR + Q L Q + L KL L + + + Sbjct: 555 TSELAKVRLQWRDKNQQVKDVTGLLSQEKHISSLDAERAKLQPGEPCALCGSIEHPLVSE 614 Query: 416 AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 Q Q L ++ + L +A+ + L +E Sbjct: 615 YQGINVSDTEQRQQKLLQELEQLKLAGEGLNLALSKLELSWEHTQQQLTHCISEQQELRN 674 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLAL 535 + L A + G + + A + + Sbjct: 675 HWHALFAQLGLSLNEFALPAPWRRASDGDKASINPGVNEAAYLEALESQLRSFIVKATEE 734 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 ++++ + + + ++ Q K LQ+ E +AQ L L+ + +T + ++ + Sbjct: 735 QHKLSECITQLSGMQNQEATELKALQQAEAQAQRLVSARDVLSAEQCNITQGIEEQIRRI 794 Query: 596 DDIQPWLDAQDEHERQL---------RLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 + ++ ++ S E Q + + + Q++ +Q Sbjct: 795 NRLEEQQQMLIQNLNTECGQFGVTLPARESSASEYQHWLNELSANLQQWRLAQQQLILKQ 854 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI------QQLTPILET 700 + + + + Q + EL AL + + + Sbjct: 855 QQLEVLQQSSSSISQQLNKNRTQIETDKQQLMTIEAELKALNAERFDCFGDKDIEHEKDQ 914 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + + ++ + + ++ +L +Q SL + Q + AL A Sbjct: 915 AEINKQQAENVNAALVSKQLEASTLENTIKTRLDSLNEQLTHLVTSLTEHQQHWQNALDA 974 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 S F D+ +F AA + + L+ LK L+ + Q Q L Q L + QQ Sbjct: 975 SPFSDEASFSAACLSQADRQALQTLKNELDTRLHQQQALAQQAKLGLEKLQQRGLAAEYQ 1034 Query: 821 LTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDW 880 L++ ++ E + Q ++ T +I + L +D++ + Q +L+ Q+ Q +D Sbjct: 1035 LSLAP-ALRIEHGELEQLQQQLTQELWQIERVLTEDSEQQAAQGSLVSQLEAAKQSYDDM 1093 Query: 881 GYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTW 940 YL++LIGS++GDKFRKFAQGLTLD+LV LAN+QL RLHGRYLL+RK S+ALE++V+DTW Sbjct: 1094 AYLHALIGSQKGDKFRKFAQGLTLDHLVALANRQLGRLHGRYLLERKGSDALELQVIDTW 1153 Query: 941 QADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDA 1000 Q DA+RDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLDSETLD ALDA Sbjct: 1154 QGDALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLDMALDA 1213 Query: 1001 LDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 LD LNASGK IGVISH+EAMKERI VQIKV K+NGLG S+L+S + Sbjct: 1214 LDNLNASGKMIGVISHIEAMKERIDVQIKVNKMNGLGISRLQSQY 1258 >UniRef50_B5HB14 Exonuclease SbcC n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HB14_STRPR Length = 1069 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 183/1095 (16%), Positives = 352/1095 (32%), Gaps = 103/1095 (9%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK L + + S G IDF + FAI G TGAGK+TLL+ LY + Sbjct: 1 MKPSRLIVSGMRSYPGTCTIDFAGKRR-----FAILGRTGAGKSTLLEGFTFGLYGASS- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 S+ + +L++ + EF V G +R + R +P +E Sbjct: 55 WSSKPEEAYELISTGSPSMHVTFEFSVNGRPWRVRRTLYANRRKP-----QAVLESMAEG 109 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + D ++ + L GLD+ F ++LL QG+F L A +RA++L + G Sbjct: 110 GADLRVDNMRAVTDAVTQLIGLDWKGFVSTVLLPQGKFDNLLKANRGDRADILRHVFGIN 169 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 ++ + +S + L + L Sbjct: 170 ELERVRKHAGVRLESLSAGI------------------------LDARSARADLLRDPHA 205 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q+ + R + + R AL+ A + + AAL A R + Sbjct: 206 VATQAALDVERTRGIAESRRERLAALRAAQGRAVAHKHRKAALDKAARLLRERSVPDAAV 265 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 A LA + +++ ++ + A Q ++ + Sbjct: 266 TL-ATLAKAKTELDAEAAAQEAAGRDLSLKLDAAQAALEAATQAGDTVRSLSGAVTVLSG 324 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 AG + ++ + +Q+ T A+Q+L L + A Sbjct: 325 LPGRAAGLDTLMQRLEQEQLQHGEHEQEHTQAQQELAEHEQRLAVLVEEADLAQHAVTQA 384 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 + Q A+ G + A LQ A + ++ ++++ ++ + Sbjct: 385 RAHTDQIQEAVRGPLQEATAAAAHLQSANTALET-VEEQRGRVDKLEAELRQLRGAREEA 443 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGS---TSHPAVEAYQALEPGVNQSRLLALEN 537 + R + + L G CP+C T + +L Sbjct: 444 EEALAAVERGEAAHTAGSALAPGDACPVCVRPLPTDFTPPSPLDGKALDKARGQLTKSSK 503 Query: 538 EVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV------------T 585 V A QL+A + Q+ + + + Q Q + Sbjct: 504 AVNTAVTAAAEATAQLNATGQGAQKHQRAHLAALERMDTSLLQLQELVDTMRPNVVPGVA 563 Query: 586 ASLNITLQPLDDIQPWL------------------------DAQDEHERQLRLLSQRHEL 621 +L+ Q L + ++ Sbjct: 564 TTLDTLSQQTAAQARALAGSDPKNRAQITRAVKTLVQPLRDTEAETLAAHTSAQAELATA 623 Query: 622 QGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQ 681 Q + + + + + ++++ ++ L T Y L E + L + AQ Q Sbjct: 624 QAEKESARADLKRQRGRLQRERKRLEKTQLQYESDLQTLLSEVTELPASIRPAQDTPQDL 683 Query: 682 NELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + + ++ L L Q+ + + + E+ + +T + + Sbjct: 684 PSPKDIASALETAGQRLAQLEQTAQARDEAQQALTEHTEHRQALDGRRRRKVETPTRNLI 743 Query: 742 LAAQSLQKAQAQFDTALQ--------------ASVFDDQQAFLAALMDEQTLTQLEQLKQ 787 + A ++ L F D A + +Q L+Q Q Sbjct: 744 KKLERWADAATDAESLLDSEAPKELPPAPDGSDLAFVDAYYQALASLSQQLAGTLKQSGQ 803 Query: 788 NLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG 847 + + +T A A H P + + + + + + Sbjct: 804 RATDAIHAFEKDLTLQAGAAADETDHDPGFPVPEKSDLLAPALLDPLSRKT-SDAEAAHD 862 Query: 848 EIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNL 907 + + L+ + L I +Q W + + KF + L Sbjct: 863 KAKSDLRTAQSQIPYAEALDAAITAADEQAAVWRRVRDQL---TDTKFLTYLTDQRTHAL 919 Query: 908 VHLANQQLTRLH-GRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALA 966 + ++ L ++ G Y + ++V++ + R TLSGGE F SLALALA Sbjct: 920 LRYGSRILQQISTGLYGFTE------DFKIVESAT-NLTRGRETLSGGEKFQTSLALALA 972 Query: 967 LSDLVSH-KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIP 1025 +L + ++++SLFLDEGFG+LDS+ L+ L L KT+ VISH+ + + + Sbjct: 973 FVELHNRSNSKLESLFLDEGFGSLDSDRLEATLPVLSNAAIQDKTLAVISHLYPVADAVE 1032 Query: 1026 VQIKVKKINGLGYSK 1040 + V+K + Sbjct: 1033 DVLFVEKTAQGSTAT 1047 >UniRef50_A6VXU8 SMC domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VXU8_MARMS Length = 1247 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 230/930 (24%), Positives = 372/930 (40%), Gaps = 53/930 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI LRLKNLNSLKGEW+IDFT+ PF G+FAI GPTGAGK+TLLDAICLALYHETPR Sbjct: 1 MKICKLRLKNLNSLKGEWEIDFTKAPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS SQND+MTR T+ECLAEVEFE+KG+ YRAFW Q RAR Q DG LQ EL Sbjct: 61 L-KVSPSQNDVMTRHTSECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCER- 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I+ K+ +K++ A +TGLD+ RFT+SMLL+QG F+AFLNA +RAELLEELTGTE Sbjct: 119 DGTIITTKINEKIDKIAEITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG +S VF++HK + + L++ LLT E L + +EK + + Sbjct: 179 IYGDVSKWVFDKHKQEKQSIAALESFNEQTQLLTNEAFAELKQTESSFEAKEKANAQSLK 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + L W + +L ++ QQ + +A PQ L A A+ L+P +E+ Sbjct: 239 THRTVLEWRRTEQKLHEQVVIYQQQVDEANQALADFAPQQRQLEQALTAQVLQPDYEKQQ 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL-----QEH 355 + L + I + Q+ + + + A L + L+ + Sbjct: 299 GLKSRLDQNQADIAQYTETQQAQLKQSQILTESVEQAKANLVNARTELDALNNKINDEIQ 358 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV---- 411 + + A + ++ E + Q QL K + A Sbjct: 359 PILSRQESMKAQHQDVVARLKQASEKVESQQSQLKTVTDKQTDIDKACEDSKAILSRWTS 418 Query: 412 -ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 Q + + Q + A + + +A + A L + + Sbjct: 419 PEKIENQLSSWQHQAQSIAANTQAVAELESNIASTTKSYDVARSSCASNQAKLEQDQAGM 478 Query: 471 KEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQS 530 ++ Q L + Q + + + + + YQ + + + Sbjct: 479 LDRQQALQNTLDTFMQLSSQRDYADWQKSYHQIERAQYNAQSLWKQFHQYQEQQSQL--A 536 Query: 531 RLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI 590 L A+ N + ++ + Q K R + + L + E+ + Q Sbjct: 537 ELDAILNAMTNGIQQQQSQLEQQRQAYKDKFRHQKSVEKLAEAERHIVALTQLRNELGEQ 596 Query: 591 TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 PL A ++ + L ++ + Q +Q +E Q+ L + Sbjct: 597 DACPLCGSAEHDLANALYQADSGSQEEFSRLGKELDSLKGQGMQLAADLESMQRELTSGQ 656 Query: 651 TGYALTLPQEDEEESWLAT-------------------------------------RQQE 673 T E+ L Q+ Sbjct: 657 TRRQQLTESLITAENELKEWLASLNHYVNSQDASFNLFDKGQVSSLVQRVNQDWNVLQEI 716 Query: 674 AQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQ 733 A + Q L+ +Q L +T+ Q + ++ + + ++ +Q Sbjct: 717 APKLEALQQSRLVLEAELQNLNVRHQTMQQQVTKDESQCQLLWQALETHQQNLISKKGEQ 776 Query: 734 QTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQR 793 + + Q ++ FD +L ++ Q A + L Q ++ L + Sbjct: 777 EQIIGHLRNEMQQAGVPESYFDLSLTEALVQLQDAMTQWRDSKTGYDALLQQREQLSYEC 836 Query: 794 RQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL--AQTHQKLRENTTSQGEIRQ 851 + Q + ++ + A+ + + +L V EQ+ + L + +E + Q Sbjct: 837 QGLQAALKESQQLQAETRDKVVEFDTSLKVIAEQLHELLGGKSIGELRQEMQSQNDHAHQ 896 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 L + RQQ + + + Sbjct: 897 MLDKVESERQQVAQALASSNATLEALNKTQ 926 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 217/916 (23%), Positives = 372/916 (40%), Gaps = 49/916 (5%) Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 TE Q A + K+ + + + L +++ + Sbjct: 329 TESVEQAKANLVNARTELDALNNKINDEIQPILSRQESMKAQHQDVVARLKQASEKVESQ 388 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQP-QLAALSLAQPARNLRPHWE 297 Q Q + + T D+ +++ E + Q A S+A + + Sbjct: 389 QSQLKTVTDKQTDIDKACEDSKAILSRWTSPEKIENQLSSWQHQAQSIAANTQAVAELES 448 Query: 298 RIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ--QQSLNTWLQEH 355 IA + + R +L+ A + Q Q+ W + + Sbjct: 449 NIASTTKSYDVARSSCASNQAKLEQDQAGMLDRQQALQNTLDTFMQLSSQRDYADWQKSY 508 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD-----E 410 + + QF Q + L + L + + Sbjct: 509 HQIERAQYNAQSLWKQFHQYQEQQSQLAELDAILNAMTNGIQQQQSQLEQQRQAYKDKFR 568 Query: 411 VATALAQHAEQRPLRQHLVALHGQIVPQQK----------RLAQLQVAIQNVTQEQTQRN 460 ++ + AE L L ++ Q L A +E ++ Sbjct: 569 HQKSVEKLAEAERHIVALTQLRNELGEQDACPLCGSAEHDLANALYQADSGSQEEFSRLG 628 Query: 461 AALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAY 520 L+ ++ + + L ++ + + + S +H V + Sbjct: 629 KELDSLKGQGMQLAADLESMQRELTSGQTRRQQLTESLITAENELKEWLASLNH-YVNSQ 687 Query: 521 QALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQ 580 A ++ ++ +L V + + +L+A+ + E E Q+L Q + QQ Sbjct: 688 DASFNLFDKGQVSSLVQRVNQDWNVLQEIAPKLEALQQSRLVLEAELQNLNVRHQTMQQQ 747 Query: 581 WQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQG---------QIAAHNQQ 631 + + Q L+ Q L ++ + Q+ + Q + Q Sbjct: 748 VTKDESQCQLLWQALETHQQNLISKKGEQEQIIGHLRNEMQQAGVPESYFDLSLTEALVQ 807 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + Q + L + ++ L QQ + + E I Sbjct: 808 LQDAMTQWRDSKTGYDALLQQREQLSYECQGLQAALKESQQLQAETRDKVVEFDTSLKVI 867 Query: 692 QQLTPIL----------ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 + L + + ++ H V +QV + + ++ + L + + Sbjct: 868 AEQLHELLGGKSIGELRQEMQSQNDHAHQMLDKVESERQQVAQALASSNATLEALNKTQL 927 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 A + A + + L + F+ + +L A + + ++Q +++++ L+ + TL+ Sbjct: 928 SLASEYEAALSHWQKRLAETGFESEVVWLQASLSTEEVSQRQEVQKKLQEAVSRLHTLLN 987 Query: 802 QTAETLAQHQQHRPDDGLA----------LTVTVEQIQQELAQTHQKLRENTTSQGEIRQ 851 Q+ E+L +H + + + ++E+++++ A+ + + G I Q Sbjct: 988 QSEESLLKHTESKSKLAVFGGAAFDGSVFEKSSLEELEEKYAELDLERQALHRQWGVITQ 1047 Query: 852 QLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLA 911 Q++++ R Q + + LN LIGS +G KFR+FAQ LTLD+LV+LA Sbjct: 1048 QIQEEVQRRDQVAKSKEALEARRGSFVHLERLNHLIGSADGAKFRRFAQSLTLDHLVYLA 1107 Query: 912 NQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV 971 NQ L LH RY L R +AL + VVDTWQA+A RDT+TLSGGESFLVSLALALALSDLV Sbjct: 1108 NQHLDILHRRYQLMR-NEDALSLLVVDTWQANASRDTKTLSGGESFLVSLALALALSDLV 1166 Query: 972 SHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK 1031 SHKT IDSLFLDEGFGTLDSETL++ALDALD L++SGKTIG+ISH+ A+KERIPVQIK+ Sbjct: 1167 SHKTSIDSLFLDEGFGTLDSETLESALDALDNLHSSGKTIGIISHINALKERIPVQIKLT 1226 Query: 1032 KINGLGYSKLESTFAV 1047 K +GLG S+L + FAV Sbjct: 1227 KQSGLGVSRLSAEFAV 1242 >UniRef50_Q15Q89 SMC protein-like n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Q89_PSEA6 Length = 1232 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 257/914 (28%), Positives = 404/914 (44%), Gaps = 31/914 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSL+ NLNSLKG+WKIDF + PFA NG+FAITGPTGAGKTTLLDAICLALYHETPR Sbjct: 1 MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S + N++MTR TAEC AEVEFEVKG AYRAFWS R+ +PDG LQ VEL A Sbjct: 61 LGALSANNNEIMTRGTAECSAEVEFEVKGMAYRAFWSMRRSHGKPDGKLQAAVVELGDVA 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 K+LA ++K K EL +TGLD+GRFT+SM+LSQG+FAAFLNA K+RAELLEELTGTE Sbjct: 121 SEKVLASQIKKKSELIEQITGLDFGRFTKSMMLSQGEFAAFLNADEKQRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS V + + A+ +L +L+AQA GV LL+ +Q Q+L Q L ++K+ Sbjct: 181 IYGLISERVHQHYSQAKQQLAELEAQAKGVQLLSEDQKQALMDEQQDLQGQQKERQIHIS 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +Q+ +NW + D Q + L QA E+E+ + L L+ + P+ LR +E + Sbjct: 241 AKQEHVNWWQQLDSAQSAQQQATLQLTQAQHEKEQQKEALQRLANSHPSEALRAPFELLT 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DRFR 359 + A + + + + +LQ++ A A + + S E Q + + + + Sbjct: 301 DAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAVSNEFQAIKATYHAQETLLNEEVI 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV--ATALAQ 417 +NE + Q +Q + L QL + TA Sbjct: 361 PLDNEIRQHQDQLTQTNAQHAQLSTKHAQLVQDVENTQTGINSQQQSLKQANDYLTARPS 420 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 + QI +Q QL + ++ +Q++++ QQ Sbjct: 421 DEALKQYLGQWQLQAQQIKKEQTSYQQLAEKCKQEQRQLHLAQQDAQLNQQQHEKINQQT 480 Query: 478 ADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQA---------LEPGVN 528 +++ +Q+ + + + + + P++ A + E Sbjct: 481 RELENEFQQQTERLSKLEEHGAIDPQERQLSTLQSLTPSLLALKNTQQQWQQQTQELTEK 540 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE---QALTQQWQAVT 585 Q++L + K L E ++ Q A ++Q++ Q AL + Sbjct: 541 QTQLADNLAQQKNLSNEREVIKRQYLAKSQQVKLLSQLISQEEQLIHFRAALKDEHPCPL 600 Query: 586 ASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQL 645 + D + ++Q L+Q E +I A ++ + ++ QR Sbjct: 601 CGAKEHPLTSEMAVDIPDTVTQKQQQESELAQLEEQGKEIRAKLDAFLRGETELRQRIDW 660 Query: 646 LLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD 705 L T + T P+ + S L+ +Q Q + L A++N+ Q L+ + Sbjct: 661 LSTQQAQLSQTWPEMCQALSPLSDQQTNLQLTIDNADSLIAIENQFNQQIQQLQKQIEKL 720 Query: 706 ELPHCEETVVLENWR--------------QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQ 751 + V E W+ + L + Q L A ++L Sbjct: 721 KTQARTLLVSKEKWQHSQSQSQSASSALLLAQQSAKNLENSAQNLSNDIQQAGETLTSLS 780 Query: 752 AQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 T +Q + +A L+ T + + + + +R T+ + QHQ Sbjct: 781 QSLLTHIQQHGYTPPEA--DNLLQWLTSKEQDAKQWEHHDNQRNEATVQIDKLTSAQQHQ 838 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 D + +EQ +Q L + L S + + + +TL + Sbjct: 839 LSLSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSLFADKSVKTERETLSETLRTLEARHE 898 Query: 872 QMTQQVEDWGYLNS 885 QQ+ ++ Sbjct: 899 HAQQQMRQKEQEHN 912 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 261/960 (27%), Positives = 401/960 (41%), Gaps = 99/960 (10%) Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 + + A +L A + + + LQ Q T Sbjct: 278 EALQRLANSHPSEALRAPFELLTDAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAV 337 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 + Q+ + + + Q AQ + + + Sbjct: 338 SNEFQAIKATYHAQETLLNEEVIPLDNEIRQHQDQLTQTNAQHAQLSTKHAQLVQDVENT 397 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 + +Q +++ N L + + +++ + + + QQ ++ ++ Q ++ +Q Sbjct: 398 QTGINSQQQSLKQANDYLTARPSD-EALKQYLGQWQLQAQQIKKEQTSYQQLAEKCKQEQ 456 Query: 363 NEPAGWRAQFSQQTSDREHLRQWQQQLT-HAEQKLNALAAITLTLTADEVATALAQHAEQ 421 + + E + Q ++L +Q+ L+ + D L+ Sbjct: 457 RQLHLAQQDAQLNQQQHEKINQQTRELENEFQQQTERLSKLEEHGAIDPQERQLSTLQSL 516 Query: 422 RPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK 481 P L Q Q + L + Q + + +Q + ++++Y K+QQ+ + Sbjct: 517 TPSLLALKNTQQQWQQQTQELTEKQTQLADNLAQQKNLSNEREVIKRQYLAKSQQVKLLS 576 Query: 482 TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA-------------VEAYQALEPGVN 528 + QE L RA L+ PCPLCG+ HP + Q E Sbjct: 577 QLISQEE---QLIHFRAALKDEHPCPLCGAKEHPLTSEMAVDIPDTVTQKQQQESELAQL 633 Query: 529 QSRLLALENEVK-------KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + + + ++ +L + L Q +++ L + L Sbjct: 634 EEQGKEIRAKLDAFLRGETELRQRIDWLSTQQAQLSQTWPEMCQALSPLSDQQTNLQLTI 693 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLS------------------------- 616 + + I Q IQ ++ + Q R L Sbjct: 694 DNADSLIAIENQFNQQIQQLQKQIEKLKTQARTLLVSKEKWQHSQSQSQSASSALLLAQQ 753 Query: 617 QRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQS 676 L+ + I Q + + Q LLT + + T P+ D WL +++Q+A+ Sbjct: 754 SAKNLENSAQNLSNDIQQAGETLTSLSQSLLTHIQQHGYTPPEADNLLQWLTSKEQDAKQ 813 Query: 677 WQ----------------------------QRQNELTALQNRIQQLTPILETLP------ 702 W+ +++LTA++ + Q L LE+L Sbjct: 814 WEHHDNQRNEATVQIDKLTSAQQHQLSLSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSL 873 Query: 703 --------------QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 ++ + RQ ++ + Q Q Q L+ Sbjct: 874 FADKSVKTERETLSETLRTLEARHEHAQQQMRQKEQEHNTHLANVQNAQTQLQQNQTRLK 933 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 Q ++ T L AS F DQQAF AAL+DE T L+ LKQ L++ + Q L+ Q + Sbjct: 934 TRQNEWQTKLLASPFADQQAFEAALLDEATRATLQTLKQTLDDNLAKYQALLEQANTQVK 993 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 H L I+ L ++ + +GEI Q L D +QQ+L Sbjct: 994 TLLAHNNATQWQLQTRDAVIEA-LNALTEEQHKGNKREGEISQALNFDKQRSSEQQSLFS 1052 Query: 869 QIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKA 928 QI + E YL+SLIGS++GDKFR FAQGLTLDNL++LAN+QL RLHGRYLL+RKA Sbjct: 1053 QIELQRNEFEHIHYLHSLIGSQKGDKFRTFAQGLTLDNLMYLANKQLERLHGRYLLKRKA 1112 Query: 929 SEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGT 988 +L + V+DTWQ D RDT+TLSGGESFLVSLALALALS+LVSHKT IDSLFLDEGFGT Sbjct: 1113 DASLALSVIDTWQGDIQRDTKTLSGGESFLVSLALALALSELVSHKTSIDSLFLDEGFGT 1172 Query: 989 LDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 LDSETLD ALDALD L+ASGK IGVISHVEAMKERI Q+ V K +GLG S+L+ +AV+ Sbjct: 1173 LDSETLDIALDALDNLHASGKMIGVISHVEAMKERIVAQLAVTKKSGLGVSELDQRYAVR 1232 >UniRef50_C6N6P2 Multidrug transporter n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6P2_9GAMM Length = 1203 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 209/958 (21%), Positives = 364/958 (37%), Gaps = 83/958 (8%) Query: 168 ERAELLE-ELTGTEIYGQISA--MVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 +R EL + EL E Q V + R E E + + L P + L + Sbjct: 250 QRRELFKPELERLERAKQALEISAVHADISALRREQESANQECNDRRLALPGREAELKTA 309 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQ-------------------- 264 LT L + +++ +L + + L + +++ Sbjct: 310 ADALTLAVADLEQKRIEQKSTLAVIRKVQALDIKLQEKEEPMIKVNEVILAIKRSLSTLL 369 Query: 265 -----ALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTR 319 + + L L + L + I L + +Q Sbjct: 370 AKNNDDCRDLAIKSIAFTEVRERLRLKKADEGLIANLAGIGSRFDILRDLNEQHGNKAAE 429 Query: 320 LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNE------PAGWRAQFS 373 L A + +Q+ L +++ LN + ++ + A WR Sbjct: 430 LSIAEMQMAELDRTWHEQTVMLATKEKELNACQHDFVHYQNQLKKTLAGRAMADWRGASM 489 Query: 374 QQTSDREHLRQWQQQ---LTHAEQKLNALAAIT--LTLTADEVATALAQHAEQRPLRQHL 428 L++ + L + L AL LTL D + + EQ + Sbjct: 490 LLKERSASLQKTMKAIHSLADLKANLEALNNRQAMLTLAQDGLVNKIQVQVEQCGAYERE 549 Query: 429 VALHGQIVPQQKRLAQLQVAIQNVTQEQ--------------------TQRNAALNEMRQ 468 V L + KR+ L + EQ + L R+ Sbjct: 550 VHLLETQLSLFKRIQDLTDIRHQLEDEQPCPLCGAKEHPFATGTIPVPDETMTLLKGARE 609 Query: 469 RYKEKTQ-----QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCG---------STSH 514 YK+ ++ + + + E + ++ + + Sbjct: 610 NYKQANAMHSGLKIKQAENVKDLEQLLLQRNECIDRIAIEEAEIQDAFSIFALDVSAQER 669 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDE 574 V E N L + V + ++ R L+ + + E E Q+ + Sbjct: 670 ETVLVNLVQETDKNLENTLQVVQVVDEYEQKMELAREALEKSKESFAQSERENQTASHKK 729 Query: 575 QALTQQWQAVTASLNITL-QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 + Q + L+ Q + L A + + L +Q ++AA Q + Sbjct: 730 ISAEQDVTRIAKELSTLDFQRQKTLDKELAALATYGIKSLALDALAHVQLELAARRDQYL 789 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI-- 691 Q+Q ++ + + + Q E L +Q + + Q+ L +N + Sbjct: 790 DLQKQNSDLEKQIASLQSQTKYQAEQISNLEIDLKNQQNMLMALKADQDLLMHERNSLFG 849 Query: 692 -QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 + + L E + + ++C L S +++++ + LQ+ Sbjct: 850 DRNPHEVETHLVAVIEAGEKRIEGLRQTLSVTEQECAKLKSAIESIEKTIFSRSLKLQEV 909 Query: 751 QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 F T L F D+ +++ A + E L Q LEN+ + +T A+ L Sbjct: 910 ALVFKTQLDKFNFADEASYINACLSEDERKNLMLNAQKLENEYTELETRRKDKADLLEIE 969 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 +Q + E + QE + +L+E + G ++Q+L+ + R++QQ +Q I Sbjct: 970 RQKKVTAQSP-----EFLVQERSGLISRLKEIQQAIGAMQQKLEGNERLRKKQQERVQAI 1024 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 ++ W L++LIGS +G K+R FAQGLT + ++ AN+QL ++ RYLL R S+ Sbjct: 1025 NLQKRESLRWDTLHALIGSSDGKKYRNFAQGLTFEMMIGHANRQLLKMTDRYLLIRDESQ 1084 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 LE+ VVD +QA +R T+ LSGGESF+VSL+LAL LS + S R+DSLFLDEGFGTLD Sbjct: 1085 PLELNVVDNYQAGEIRSTKNLSGGESFIVSLSLALGLSHMASKNVRVDSLFLDEGFGTLD 1144 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 + LDTAL+ L L +GK IGVISHV +KERI +I++ G S + + Sbjct: 1145 EDALDTALETLAGLQQAGKLIGVISHVPTLKERISTRIQIS-HQTGGRSLISGPGCRR 1201 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 186/853 (21%), Positives = 329/853 (38%), Gaps = 19/853 (2%) Query: 23 TREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAE 82 T F S+G+FAI GPTG+GKTT+LDAICLALY TPRL+ V++S+N++M R T C +E Sbjct: 2 THPAFVSDGIFAIIGPTGSGKTTILDAICLALYGRTPRLNKVTKSENEIMARQTGACFSE 61 Query: 83 VEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGL 142 V FE + +R WSQ RAR +PDG LQ P+ E+A +IL K++ E +TG+ Sbjct: 62 VLFETQAGRFRCHWSQRRARKKPDGELQTPKHEIADADSNQILDAKLRGVAEQIEMVTGM 121 Query: 143 DYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEK 202 D+ RFTRSMLL+QG FAAFL A P ERA +LE++TGTEIY QIS V E+ R L+ Sbjct: 122 DFDRFTRSMLLAQGGFAAFLQAVPDERAPILEQITGTEIYSQISMCVHERRSDERKTLDL 181 Query: 203 LQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRR 262 + A+ +GV LL E+ Q L SL ++E L ++ ++ WL + + L+++ Sbjct: 182 MMAELAGVQLLGDEEEQQLNVSLDHHNNQEVLLQQEITKKNLAMTWLEQLNSLEKDLGFI 241 Query: 263 QQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQS 322 + L E +P+L L A+ A + I+ Q+ + L Sbjct: 242 IEQQHDLLQRRELFKPELERLERAKQALEISAVHADISALRREQESANQECNDRRLALPG 301 Query: 323 TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL 382 A + A+L+Q++ + L + + + + + + Sbjct: 302 REAELKTAADALTLAVADLEQKRIEQKSTLAVIRKVQALDIKLQEKEEPMIKVNEVILAI 361 Query: 383 RQ-WQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE-QRPLRQHLVALHGQIVPQQK 440 ++ L LA ++ T L + E + + + + Sbjct: 362 KRSLSTLLAKNNDDCRDLAIKSIAFTEVRERLRLKKADEGLIANLAGIGSRFDILRDLNE 421 Query: 441 RLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL 500 + + + + + +E K ++L + + L Sbjct: 422 QHGNKAAELSIAEMQMAELDRTWHEQTVMLATKEKELNACQHDFVHYQN-----QLKKTL 476 Query: 501 QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL 560 G++ + + L L+ ++ L A L D + ++ Sbjct: 477 AGRAMADWRGASMLLKERSASLQKTMKAIHSLADLKANLEALNNRQAMLTLAQDGLVNKI 536 Query: 561 QRDENEAQSLRQDEQALTQQW---QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQ 617 Q + + ++ L Q + + +I Q D+ L EH + Sbjct: 537 QVQVEQCGAYEREVHLLETQLSLFKRIQDLTDIRHQLEDEQPCPLCGAKEHPFATGTIPV 596 Query: 618 RHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSW 677 E + + Q + + L Q +E +A + E Q Sbjct: 597 PDETMTLLKGARENYKQANAMHSGLKIKQAENVKDLEQLLLQRNECIDRIAIEEAEIQDA 656 Query: 678 QQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQ 737 + Q R L +++ ++ E VV E +++ ++ L+ Sbjct: 657 FSIFALDVSAQERETVLVNLVQETDKNLENTLQVVQVVDEYEQKMELA-------REALE 709 Query: 738 QQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 + AQS ++ Q + A + A + +D Q L++ L + Sbjct: 710 KSKESFAQSERENQTASHKKISAEQDVTRIAKELSTLDFQRQKTLDKELAALATY--GIK 767 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 +L + R D L L +++++A + + + LK Sbjct: 768 SLALDALAHVQLELAARRDQYLDLQKQNSDLEKQIASLQSQTKYQAEQISNLEIDLKNQQ 827 Query: 858 DNRQQQQTLMQQI 870 + + + Sbjct: 828 NMLMALKADQDLL 840 >UniRef50_Q080L9 SMC domain protein n=2 Tax=cellular organisms RepID=Q080L9_SHEFN Length = 1232 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 304/953 (31%), Positives = 452/953 (47%), Gaps = 89/953 (9%) Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 +++ + + L + Q +A T + EQ++ LT + V +Q Q Q Sbjct: 278 DELTRLEHSEPAQQIQPLFEQQQKAQLSTRVLSEQIEQLTEQVSVAEQTLRQHTHKQTQA 337 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 +QS++ + + +Q + Q LS Q A E+ + Sbjct: 338 KQSVDKTNQAHKDLLNLIDKQVLPLDQHISQLNYQLSQVILSHQQTAEQQHKTIEQQQQL 397 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 A + +++ +L + + + AA Q+ Q Q + + R +Q + Sbjct: 398 MALQQQLSSAKQDIQQQLDNLPQGQEVAKKFAAWQTQYSQVLQLNQQLSQLDTQRVQQQH 457 Query: 363 NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQR 422 N + Q L A+ + +++ Q EQ+ Sbjct: 458 NIEQTQTTLTELSPQIKLAKTTVTQALAQQADSQQAITTLLAGQDENQINHDYQQLVEQQ 517 Query: 423 PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKT 482 R L L V QQ++ QL + +L+ +R ++ EK QQ+ D++T Sbjct: 518 AGRYQLTQLFSHFVRQQQQCQQLSSQSVQFNTDLQALAQSLSLVRTQWSEKNQQVKDLQT 577 Query: 483 ICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKL 542 I +QE +I L +RA+L+AG+PC LCGST HP VE Y+AL V + R+ L+ E+ + Sbjct: 578 ILQQEQQIANLTLERAKLKAGEPCALCGSTDHPLVERYEALNVSVTEQRMQQLQIELDAI 637 Query: 543 GEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWL 602 ++G L+ Q A+ + + + Q QQWQ T +L +T + + Q L Sbjct: 638 KQQGEQLKNQQTALQVNYDNSLMQLSQAQTELQTTEQQWQQHTQALAVTFELHEQQQHKL 697 Query: 603 -----DAQDEHERQLRLLSQRHELQGQIAAHN---------------------------- 629 ++ + ++ + +SQ ++ Q + H Sbjct: 698 TDYIAQSEAKQQQLAQTISQLNQCQKTLHQHQHNATQAEQALAVLVNQQGLLQQQLDNLS 757 Query: 630 -------QQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQ---- 678 QQI +Q++Q L + LT P + ++WL QQ+ + W Sbjct: 758 QGLVSQQQQIESINKQLQQLNSALDAHIIATGLTPPTLENADTWLHHLQQQLERWVAAQQ 817 Query: 679 ------------------------QRQNELTALQNRIQQLTPILETL------------- 701 + +L + ++ L L+ + Sbjct: 818 QAIDNQQQLSVTAEKLTANNLHSTEMATKLAEVTEQVVTLNEQLDAVLAQRKAVFGDKIV 877 Query: 702 -------PQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + + + + + + L +Q Q+ QQ A Q LQ+ QA++ Sbjct: 878 EDEKLFSQHAVDQAQQVFVSIQQQLQTADKHFAGLQAQLQSTTQQVTKANQELQQLQAKW 937 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 ALQ+S F DQQ+F AL+ + L+QLKQ L+N +A TLV Q + Q Sbjct: 938 QMALQSSPFTDQQSFEQALLTPKERHTLQQLKQQLDNDIVKANTLVEQAKIKQTELAQQA 997 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 G + I + K +++ + + +L+QD + R QQ L+ + AQ+ Sbjct: 998 EQHGYDIAQHGN-IMLQHQTMEAKHQQDKQTLWRLSHELEQDTNKRAGQQQLLAEQAQIQ 1056 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEV 934 Q +D YL+SLIGS++GDKFRKFAQGLTLD+LV LAN+QL RL GRYLL+RK S+ALE+ Sbjct: 1057 QDYDDLAYLHSLIGSQKGDKFRKFAQGLTLDHLVALANRQLERLQGRYLLERKESDALEL 1116 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETL 994 +V+DTWQ DAVRDTRTLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFGTLDS+TL Sbjct: 1117 QVLDTWQGDAVRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSQTL 1176 Query: 995 DTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 DTALDALD LNASGK IGVISH+EAMKERI VQIKV K+NGLG SKL+ FAV Sbjct: 1177 DTALDALDNLNASGKMIGVISHIEAMKERIDVQIKVTKMNGLGISKLQGEFAV 1229 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 246/916 (26%), Positives = 378/916 (41%), Gaps = 24/916 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLR KN+NSLK EWKIDFT+ PFA NGLFAITGPTG+GKTT+LDAICLALYH TPR Sbjct: 1 MKILSLRFKNINSLKNEWKIDFTQSPFAENGLFAITGPTGSGKTTILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LSN+S++ N+LMTR TAECLAEVEFEVKG AYRAFWSQ R+R++ DGNLQ +VELA+ + Sbjct: 61 LSNISKTTNELMTRGTAECLAEVEFEVKGVAYRAFWSQRRSRDKADGNLQDAQVELAKLS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILA ++K K EL +TGLD+ RFT+SM+LSQGQFAAFLNA+ ERAELLEELTGTE Sbjct: 121 DGKILASQIKRKTELIEEITGLDFARFTKSMMLSQGQFAAFLNAEANERAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY ISA V + A+T L+ L+A+ V L +QV + ++ L Sbjct: 181 IYSLISARVHQHFSDAKTNLKVLEAKLGSVELFDEQQVVAQQLQIEQLNQALVIDQQQLA 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q Q + W ++ QQ Q QQAL+ ++ +L L ++PA+ ++P +E+ Sbjct: 241 QLSQFITWADNTEQSQQTLVNIQAQQQQALSSVQQHSDELTRLEHSEPAQQIQPLFEQQQ 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR- 359 + + + +QIE++ ++ H + + + Q+ L D+ Sbjct: 301 KAQLSTRVLSEQIEQLTEQVSVAEQTLRQHTHKQTQAKQSVDKTNQAHKDLLNLIDKQVL 360 Query: 360 -----------QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 Q + + QQ E +Q + L Sbjct: 361 PLDQHISQLNYQLSQVILSHQQTAEQQHKTIEQQQQLMALQQQLSSAKQDIQQQLDNLPQ 420 Query: 409 DEV-----ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + A Q+++ L Q L L Q V QQ + Q Q + ++ + + Sbjct: 421 GQEVAKKFAAWQTQYSQVLQLNQQLSQLDTQRVQQQHNIEQTQTTLTELSPQIKLAKTTV 480 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 + + + Q + + ++ + Q QAG+ + + Sbjct: 481 TQALAQQADSQQAITTLLAGQDENQINHDYQQLVEQ-QAGRYQLTQLFSHFVRQQQQCQQ 539 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + L+ + L + + + E Q + + Sbjct: 540 LSSQSVQFNTDLQALAQSLSLVRTQWSEKNQQVKDLQTILQQEQQIANLTLERAKLKAGE 599 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A T PL + L+ +R +L + ++ Q Q Q + Sbjct: 600 PCALCGSTDHPLVERYEALNVSVTEQRMQQLQIELDAIKQQGEQLKNQQTALQVNYDNSL 659 Query: 644 QLLLTTLTGYALTLPQEDEEESWL----ATRQQEAQSWQQRQNELTALQNRIQQLTPILE 699 L T T Q + L +Q+ + A Q ++ Q L Sbjct: 660 MQLSQAQTELQTTEQQWQQHTQALAVTFELHEQQQHKLTDYIAQSEAKQQQLAQTISQLN 719 Query: 700 TLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 ++ T + + Q L Q L Q V Q ++ Q Sbjct: 720 QCQKTLHQHQHNATQAEQALAVLVNQQGLLQQQLDNLSQGLVSQQQQIESINKQLQQLNS 779 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAET--LAQHQQHRPDD 817 A L E T L L+Q LE Q + + A+ Sbjct: 780 ALDAHIIATGLTPPTLENADTWLHHLQQQLERWVAAQQQAIDNQQQLSVTAEKLTANNLH 839 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + + ++ +++ +++L + + + + Q + Q Sbjct: 840 STEMATKLAEVTEQVVTLNEQLDAVLAQRKAVFGDKIVEDEKLFSQHAVDQAQQVFVSIQ 899 Query: 878 EDWGYLNSLIGSKEGD 893 + + + Sbjct: 900 QQLQTADKHFAGLQAQ 915 >UniRef50_C8PYK7 Exonuclease SbcC n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYK7_9GAMM Length = 1261 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 215/927 (23%), Positives = 356/927 (38%), Gaps = 60/927 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL LR +NLNSL+GEW+IDF +A G+FAITG TGAGK+T+LDAICLALY TPR Sbjct: 1 MRILKLRFQNLNSLQGEWEIDFRHAAYADEGIFAITGSTGAGKSTILDAICLALYGATPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++QS+NDLM+R T ECL+EV F K +YR W Q RAR P+GNLQ P E+A Sbjct: 61 LGEITQSKNDLMSRHTGECLSEVIFTTKSGSYRCTWLQKRARKNPEGNLQSPTHEIAPFT 120 Query: 121 DGK----ILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 D L + + +L A TG+D+ RFTR+MLL+QG FAAFL A ER+ LLEE+ Sbjct: 121 DDAADLPPLETQTRKTRKLVAEFTGMDFDRFTRAMLLAQGSFAAFLQANSDERSNLLEEI 180 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 TGTEIYG IS V E + EL+ L + SG+T+L+ E+V SLT+ L D + Sbjct: 181 TGTEIYGDISKKVHEFKTQSDAELKTLTDRLSGMTVLSDEEVHSLTSQKNALVDIVNETK 240 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 TA + + W D + + + + +E + PQ L A A + Sbjct: 241 TAMTKIESDKLWRQNLDAYTHQIHKLKHEARDLAEQESQFSPQKIQLQRALKALEVSGDI 300 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 +++ L+ + RL + + + ++ A+ QQ + + Sbjct: 301 KKLDYQRDLLSTQLSDLASYQHRLPTAEHHCQLAQKNQDERQAKAQQTENDWQQAQPLLN 360 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 + R+ + + L + + + Sbjct: 361 QVRKLDTTLGQKNQYAQEIAQQLSQLSEELAHNAQSIDSQQQQLVSQQVEREQLIQAQQQ 420 Query: 417 Q---------HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMR 467 A L++ L Q+ + QLQ + Q+ + + L +++ Sbjct: 421 IPHATTLPQTLASLTQLQETSQTLSEQLQAFASQQQQLQGEFKRNEQQASALQSQLTQLQ 480 Query: 468 QRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQA--GQPCPLCGSTSHPAVEAYQALEP 525 + E Q L + + ++ A R Q++ L S Sbjct: 481 SQISEHRQNLESQTSQLHHLTQGQSAAALRQQVETYWQTDQQLAAIQSDVQTWQTNLQHY 540 Query: 526 GVNQSRLLALENEVKKLGEEGA-------------TLRGQLDAITKQLQRDENEAQSL-- 570 +L + ++ ++ + L + + ++Q +E L Sbjct: 541 QQFVQQLADGQTQLAQIASQRLTMEQQQQAAEQTVDLLNRNLILLAKIQDLTDERDKLRH 600 Query: 571 -------------------------RQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ 605 Q Q+ + L L + + Sbjct: 601 GEPCPLCGSTAHPFATHQPYTPDDTEQQLAIAKQRLDNINHQLQQLLLEEHALTNSQQQR 660 Query: 606 DEHERQLRLLSQR----HELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQED 661 +E+ + L+ +QR +L Q H Q + Q + + + Sbjct: 661 NENLQHLQAHNQRLLNQLQLASQYLIHAQPVQQAIEALPPVAAPSTDDDIDHQALQRLAT 720 Query: 662 EEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQ 721 ++ QQ + Q ++ A+Q+ QQ L +L + ++T++ + Sbjct: 721 IIKAEQTNNQQSLAALQDSLTQIEAVQSEQQQTQQRLASLSEQYNDVLQQQTLLHNQQQH 780 Query: 722 VHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE-QTLT 780 ++ + +QQ + + Q + K F T + F Q A L TL Sbjct: 781 RQDRIRGIDAQQLVIADKQHQVIQRIDKLLMPFATRERTFSFATTQDVNAQLNQHIDTLA 840 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 QL Q Q LE + +T +TL + + ++ Q + Sbjct: 841 QLLQRYQGLETKLSHINDTITGIEQTLTRLVADQQHLTQNQHQARQRQQALAQEISDLQA 900 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLM 867 + GE + A + + Q L Sbjct: 901 QRYALFGEQAVDIVSHALVQAKNQALQ 927 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 184/895 (20%), Positives = 323/895 (36%), Gaps = 65/895 (7%) Query: 198 TELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQ 257 +L+ Q + +Q+ L+ L +Q L + + Sbjct: 363 RKLDTTLGQKNQYAQEIAQQLSQLSEELAHNAQSIDSQQQQLVSQQVEREQLIQAQQQIP 422 Query: 258 EASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVN 317 A+ Q L +E +Q L + + E A+ + + Sbjct: 423 HATTLPQTLASLTQLQETSQTLSEQLQAFASQQQQLQGEFKRNEQQASALQSQLTQLQSQ 482 Query: 318 TRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTS 377 + + H Q +Q + T+ Q + ++ W+ Sbjct: 483 ISEHRQNLESQTSQLHHLTQGQSAAALRQQVETYWQTDQQLAAIQSDVQTWQTNLQHYQQ 542 Query: 378 DREHLRQWQQQLTHAEQKLNA--LAAITLTLTADEVATALAQHAEQRPLRQHLVALHG-- 433 + L Q QL + T D + L A+ + L L Sbjct: 543 FVQQLADGQTQLAQIASQRLTMEQQQQAAEQTVDLLNRNLILLAKIQDLTDERDKLRHGE 602 Query: 434 ------------------QIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 +++LA + + N+ + Q + + +++ + Sbjct: 603 PCPLCGSTAHPFATHQPYTPDDTEQQLAIAKQRLDNINHQLQQLLLEEHALTNSQQQRNE 662 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLAL 535 L ++ ++ L +Q P+ + A + + ++ L L Sbjct: 663 NLQHLQAHNQRLLNQLQLASQYL----IHAQPVQQAIEALPPVAAPSTDDDIDHQALQRL 718 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPL 595 +K L Q++ ++E Q +Q +L++Q+ V + Sbjct: 719 ATIIKAEQTNNQQSLAALQDSLTQIEAVQSEQQQTQQRLASLSEQYNDVLQQQTLLHNQQ 778 Query: 596 DDIQPWLDAQDEHERQLRLLSQR------------------------HELQGQIAAHNQQ 631 Q + D + + + ++ Q+ H Sbjct: 779 QHRQDRIRGIDAQQLVIADKQHQVIQRIDKLLMPFATRERTFSFATTQDVNAQLNQHIDT 838 Query: 632 IIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI 691 + Q Q+ + + L + Q +QRQ L + + Sbjct: 839 LAQLLQRYQGLETKLSHINDTITGIEQTLTRLVADQQHLTQNQHQARQRQQALAQEISDL 898 Query: 692 QQLTPIL----------ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDV 741 Q L L Q+ + + + + Q L Q +L Sbjct: 899 QAQRYALFGEQAVDIVSHALVQAKNQALQDYQISQTAFHEQLSQLQILQQQIASLTTSTN 958 Query: 742 LAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVT 801 + Q Q F D + A++ + +L+QL L + +++ L++ Sbjct: 959 HLKTAQQTLQDDIQQRFATLGFVDDADYRTAVLVDTERERLQQLANQLHDSQQRNHNLLS 1018 Query: 802 QTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQ 861 + Q H +++EQ+ L Q Q+ E G + QQL + +Q Sbjct: 1019 EAKRIQQQLLNH-----PQTALSLEQLLDALGQLQQQFSEQQKQLGAVEQQLAANEALKQ 1073 Query: 862 QQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR 921 QQ L+ I Q E+W L+ LIGS +G KFR FAQGLT + +V AN+QL ++ R Sbjct: 1074 NQQQLLDAINQQRNHTEEWKVLHQLIGSSDGKKFRNFAQGLTFNIMVAHANEQLKKMSDR 1133 Query: 922 YLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLF 981 YLL + + L + V+D +Q +R ++ LSGGESF++SL+LAL LS++ SH+ ++DSLF Sbjct: 1134 YLLIADSEQPLMLNVMDNYQGGQIRTSKNLSGGESFIISLSLALGLSNMASHRMQVDSLF 1193 Query: 982 LDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 LDEGFGTLD E LD ALD L L SGK IGVISH++A+K+RI QI+V G Sbjct: 1194 LDEGFGTLDEEALDVALDTLTNLQQSGKLIGVISHIQALKDRISSQIQVVPQTGG 1248 >UniRef50_Q4FSU3 Possible exonuclease SbcCD, C subunit n=2 Tax=Psychrobacter RepID=Q4FSU3_PSYA2 Length = 1307 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 190/946 (20%), Positives = 359/946 (37%), Gaps = 73/946 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+++ LRLKNLNSLKGEW IDF+ F + G+FAITG TGAGKTT+LDAICLALY +TPR Sbjct: 1 MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +++ S N++MT+ T EC AEV E+ + Y+ W Q+RA + GNL + E++ Sbjct: 61 LGDITGSTNEIMTQGTGECSAEVIIEIDAKRYQCSWYQHRAHKKAKGNLLPIKHEISEVK 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL +K L G+D+ +FTRS++L+QG FAAFL + +RA +LE++TGT Sbjct: 121 SGKILEEKKSKTSAYIQALIGMDFSQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L KLQA G++LL+ E A L+ L ++ + + Sbjct: 181 IYAKISLNVHEKKRFEEDVLSKLQAGVDGLSLLSIEDENLQAAELKALNQQQSTQRQSFK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + L WL +LQ S Q A ++ P+ LS+A A + + ++ Sbjct: 241 TLSEQLQWLNNVQQLQNNLSIYQSEFATAQQAQQAFVPEAKRLSIANKALEIDSQFRELS 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + + + + +++ + A H + +Q +L T L + R+ Sbjct: 301 YSRETVKKLDVEQQSLLSQIPAQQQALAQAACHLDDANTLGKQAADNLQTNLPVIAQVRE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHL----RQWQQQLTHAEQKLNALAAITLTLTA-------- 408 ++ + ++ L + Q++ + +Q + + Sbjct: 361 LDHNIRQQSQSLVEYNQRKDLLVGNAQILCQEIQNHQQTADRTKTQLNNIDQYFSSYPEL 420 Query: 409 --------------DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ 454 + L +++ R +L Q+ + L++ Q ++ Sbjct: 421 SDLDTDMTIFDSSCQRLRALLEDNSDFSAARISQHSLACQLQADFEILSKQQNTDLSLIA 480 Query: 455 EQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSH 514 ++ ++ L + + + + E +E R +++ Sbjct: 481 QRREQLLNLQQQQAVVTQNQPLAIMRGEQEQIEHISAQIEQVRFKIKQRFE-LTRQIHKI 539 Query: 515 PAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQ-- 572 E V + +++ + + L A+ +++ R E+ L+ Sbjct: 540 NLALPVLNQELTVLDDLIATHRVDIQSTKLKKHDKQTHL-ALLQKVARLEDYIVELKDGT 598 Query: 573 -------------DEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRH 619 L +L++T Q I + E+ L H Sbjct: 599 PCPLCGAHEHPYGQHHPLLDGQIDNKQALSLTQQTQQQISELETLIEHLEQALSKHHIDH 658 Query: 620 ELQGQIAAHNQQIIQ--------YQQQIEQRQQLLLTTLTGYALTLP------------- 658 + + H QQ + + I+ LL ++ + Sbjct: 659 ATKNEAINHQQQQLAPLQQQCEMLGKDIQDSLLLLFDANKNHSKAIAGSVHPLYQLSEDI 718 Query: 659 ------QEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEE 712 + ES L+ Q +++ L L + LT + L + + ++ Sbjct: 719 NKPDIDSNSDIESTLSLLDSAKQKLLEQKQSLKDLLIQHDDLTASISELNIAIKSDENQQ 778 Query: 713 TVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 V++ + + T++ + +L + + D + Sbjct: 779 QVLMSKLNNLTTDIKLHSQKAGTIEDKIAANFLALAAITSSILSLADKYPADS---YREY 835 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL 832 L + T ++ + L+ + L + E + + L + + Sbjct: 836 LSIDFQRTDIQSALKQLDASIDEQTILDSSDYERHINRLRQQRSMLSQLKKHFNEQKNSQ 895 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 Q L + QL D ++ + L+ +QV+ Sbjct: 896 QQLSNTLSTVRAQIDTKQAQLTSDESALKRLEHLIADKNVALEQVK 941 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 166/848 (19%), Positives = 338/848 (39%), Gaps = 46/848 (5%) Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS----LAQPARNLRPHW 296 Q Q L++Q +++ L +++ Q L+ + ++ Sbjct: 460 QLQADFEILSKQQNTDLSLIAQRREQLLNLQQQQAVVTQNQPLAIMRGEQEQIEHISAQI 519 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ---QQQSLNTWLQ 353 E++ + +QI ++N L + A ++Q ++ T L Sbjct: 520 EQVRFKIKQRFELTRQIHKINLALPVLNQELTVLDDLIATHRVDIQSTKLKKHDKQTHLA 579 Query: 354 EHDRFRQWNNEPAGWRA---------------QFSQQTSDREHLRQWQQQLTHAEQKLNA 398 + + + + Q + +Q +Q+++ Sbjct: 580 LLQKVARLEDYIVELKDGTPCPLCGAHEHPYGQHHPLLDGQIDNKQALSLTQQTQQQISE 639 Query: 399 LAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQ 458 L + L + + + L + +Q ++ + Sbjct: 640 LETLIEHLEQALSKHHIDHATKNEAINHQQQQLAPLQQQCEMLGKDIQDSLLLLFDANKN 699 Query: 459 RNAALNEMRQRYKEKTQQLA--DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 + A+ + ++ + D+ + + E+ + L++ + +L + H Sbjct: 700 HSKAIAGSVHPLYQLSEDINKPDIDSNSDIESTLSLLDSAKQKLLEQKQSLKDLLIQHDD 759 Query: 517 VEAYQAL---EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 + A + ++++ L +++ L + + I ++ + ++ Sbjct: 760 LTASISELNIAIKSDENQQQVLMSKLNNLTTDIKLHSQKAGTIEDKIAANFLALAAITSS 819 Query: 574 EQALTQQW--QAVTASLNITLQPLDDIQPWLDAQDEH-ERQLRLLSQRHELQGQIAAHNQ 630 +L ++ + L+I Q D E+ + S ++ Sbjct: 820 ILSLADKYPADSYREYLSIDFQRTDIQSALKQLDASIDEQTILDSSDYERHINRLRQQRS 879 Query: 631 QIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 + Q ++ +++ + Q D +++ L + + + + + + Sbjct: 880 MLSQLKKHFNEQKNSQQQLSNTLSTVRAQIDTKQAQLTSDESALKRLEHLIADKNVALEQ 939 Query: 691 IQQLTPIL----------ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQD 740 ++ + L + + ++ + L S+Q+ + Sbjct: 940 VKSDRTAIFADKNTESEDTLLRSAVDDAKAKQANAQRQLDSTQQVLAQLQSRQRQILAAL 999 Query: 741 VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV 800 A +L QA F L+A+ F D+ AF+ A + ++ L K +++ +QA++ + Sbjct: 1000 QSATTALNTQQAVFLEHLEAAQFMDEDAFIRARLPKEERDALHLRKLAIDSALQQAKSQL 1059 Query: 801 TQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNR 860 T ++L Q+ + E I + ++ + + G I Q+LK + + + Sbjct: 1060 DSTQQSLEQNL-----SLAMTNASQETIAAQHQHIQMEIDQLSQQIGAIVQKLKDNENQK 1114 Query: 861 QQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHG 920 Q+ + I ++++ W L+ LIGS +G K+R FAQGLT + ++ AN QL ++ Sbjct: 1115 GQRAAQLTAINVQKEKLKIWQQLHILIGSADGKKYRTFAQGLTFEVMISHANSQLQKMSD 1174 Query: 921 RYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSL 980 RYLL S LE+ V+D +Q +R T+ LSGGE F++SLALAL LS + SH R+DSL Sbjct: 1175 RYLLIHDDSNPLELNVIDNYQGGDIRSTKNLSGGEGFIISLALALGLSQMASHNIRVDSL 1234 Query: 981 FLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSK 1040 FLDEGFGTLD E+LD ALD L L GK IG+ISHV+A+K+RI QIKV+KI+G G+S+ Sbjct: 1235 FLDEGFGTLDEESLDIALDTLTGLQQEGKLIGIISHVQALKDRILTQIKVEKISG-GFSQ 1293 Query: 1041 LESTFAVK 1048 + + Sbjct: 1294 ISGQGCRR 1301 >UniRef50_B2Q6W2 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q6W2_PROST Length = 1225 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 273/935 (29%), Positives = 418/935 (44%), Gaps = 29/935 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKN+NSLKGEWKIDFT+EPFAS GLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNINSLKGEWKIDFTQEPFASQGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 LS +S QN+LMTR T ECLAEVEFEVKG AYRAFWSQ RA N+P+G LQ P+ ELA + Sbjct: 61 LSTLSVKQNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRASNKPEGKLQPPKAELATVS 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKI+A+KV D E +TGLD+GRFT+S+LLSQG FAAFLNA KERA+LLEE+TGTE Sbjct: 121 DGKIIAEKVSDIREQIVQITGLDFGRFTKSILLSQGDFAAFLNASEKERADLLEEITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY QIS+ ++ QHK + +LE L+A+A + LLT + Q+L VL D+E+QL + Sbjct: 181 IYSQISSYIYRQHKQVKNDLEILKARAQSIHLLTESEHQALIEQQTVLADQERQLNQKRT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q QQ+L W RQ +L + + QQA + A+PQ LS PA NLRP W+ + Sbjct: 241 QNQQALYWQQRQQQLTARLHQLELDQQQAEKAYQDAEPQFKKLSDNLPAENLRPLWQDVE 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL-------- 352 AL + ++ + ++ + ++ ++ A+ E Q Q + Sbjct: 301 RQQQALNELLEKQQSLSQQCENNTQQLTPLQAQLAQVQHEHSQHQNYVQQQTVLIDTHVR 360 Query: 353 ----QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 +Q ++ S + + Q Q ++L + Sbjct: 361 PLDNAILHLHQQIKEISEQKEQYHTEYQSKHSLITRTQHQAHLDREELQQIEHYLQQHPQ 420 Query: 409 -----DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 ++ Q L Q + AL + Q+ + L Q ++ Q L Sbjct: 421 DAAITQQIGLWRQQGQFIDELSQKVQALEQKQQLLQQEQSALVSEQQQQIEQNAQTQHQL 480 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGS--TSHPAVEAYQ 521 + Y+ + + + + E +++E + Q Q PL S + Sbjct: 481 EQDTAAYQLVESRYLEWQEKQDIEQLNQSIEQLHTRSQHAQLLPLLLSQWQEQQNQLKIK 540 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 + + E +++ + L+ L + +L+ ++ ++ +Q + + Sbjct: 541 QHQQEELTQSISQAEKQLQLTETQITHLQPHLTDLNARLRLEQKIVSLEKERQQLIAGEP 600 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + S + + L + + Q + Q+ +Q Q + +Q Sbjct: 601 CPLCGSTEHPAIEQYQSVEPTQTEQRLIALTKQLEELKQTQVTQQSLLQREMQRQAENQQ 660 Query: 642 RQQLLLTTLTGY------ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLT 695 QQ L+ A E + A +Q Q++ +E L Sbjct: 661 AQQQLIAQERQLRTQWMTACQKALAPELTTTHAAVEQLLTDIQKQLSEKQQSLQAFTALE 720 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 + L + + E+ H Q++ V+ Q + Q Q Sbjct: 721 REYQQLKHRLHEQQSLNKQQQSSLALLTERIKHQHQLIDETQKEHVVHQQRHNQQQQQLH 780 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQL----EQLKQNLENQRRQAQTLVTQTAETLAQHQ 811 AL + ++F + QL +Q Q++ + A+ + Sbjct: 781 EALAEFRLPESESFEPWFTLLEQRGQLYAAKKQSAQDISQKIAVAEATLQVELAQQTHLS 840 Query: 812 QHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIA 871 + + L +Q++Q+ A L + SQ R Q +Q+ QQQQ Q Sbjct: 841 KRLENTQQQLQQLQQQVEQKQAARQLLLDGQSISQFMGRLQDQQNKLAHQQQQLNEQVTH 900 Query: 872 QMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDN 906 G LN +I + E +++ ++ Sbjct: 901 HEKHLASLKGSLNEVITTIEKTRYQLTTAQQRFEH 935 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 233/860 (27%), Positives = 370/860 (43%), Gaps = 21/860 (2%) Query: 207 ASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQAL 266 EQ + Q + +++ L + + + + Q + Sbjct: 369 LHQQIKEISEQKEQYHTEYQSKHSLITRTQHQAHLDREELQQIEHYLQQHPQDAAITQQI 428 Query: 267 QQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMAL 326 + + + + + L + + + + Sbjct: 429 GLWRQQGQFIDELSQKVQALEQKQQLLQQEQSALVSEQQQQIEQNAQTQHQLEQDTAAYQ 488 Query: 327 RASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQ 386 R+ ++ +++Q QS+ + + W+ Q +Q + + Sbjct: 489 LVESRYLEWQEKQDIEQLNQSIEQLHTRSQHAQLLPLLLSQWQEQQNQLKIKQHQQEELT 548 Query: 387 QQLTHAEQKLNALAAITLTLTADE--VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQ 444 Q ++ AE++L L + L + L + L + Sbjct: 549 QSISQAEKQLQLTETQITHLQPHLTDLNARLRLEQKIVSLEKERQQLIAGEPCPLCGSTE 608 Query: 445 LQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQ 504 Q + E TQ L + ++ +E Q +++ ++E + + Q Q Q Sbjct: 609 HPAIEQYQSVEPTQTEQRLIALTKQLEELKQTQVTQQSLLQREMQRQAENQQAQQQLIAQ 668 Query: 505 PCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE 564 L A + A E + + L +++K E A+ ++ Q+ + Sbjct: 669 ERQLRTQWM-TACQKALAPELTTTHAAVEQLLTDIQKQLSEKQQSLQAFTALEREYQQLK 727 Query: 565 NEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQ-- 622 + + + +T + Q +D+ Q + Q + + Sbjct: 728 HRLHEQQSLNKQQQSSLALLTERIKHQHQLIDETQKEHVVHQQRHNQQQQQLHEALAEFR 787 Query: 623 -----------GQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQ 671 + Q +Q + Q + + L Q+ L Q Sbjct: 788 LPESESFEPWFTLLEQRGQLYAAKKQSAQDISQKIAVAEATLQVELAQQTHLSKRLENTQ 847 Query: 672 QEAQSWQ---QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLA 728 Q+ Q Q +++ L Q ++ + L ++ + E + + Sbjct: 848 QQLQQLQQQVEQKQAARQLLLDGQSISQFMGRLQDQQNKLAHQQQQLNEQVTHHEKHLAS 907 Query: 729 LHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQN 788 L + L AQ +F+ AL S F QQAFLAAL+ QLEQL+Q Sbjct: 908 LKGSLNEVITTIEKTRYQLTTAQQRFEHALSTSPFATQQAFLAALLAPDEKLQLEQLQQR 967 Query: 789 LENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGE 848 L R QAQT + +H +PDD + ++E+ QQ + Q ++++ QG+ Sbjct: 968 LLQSRLQAQTRYKEGERARQEHLAQKPDD--HIEASLEEWQQAIIQLDEEIKNLNKQQGQ 1025 Query: 849 IRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLV 908 I QL+ D R QQ+ L+Q+I Q EDWGYL LIGS EGDKFR++AQGLT D L+ Sbjct: 1026 IFSQLEADKQQRHQQRGLLQEIEQSQSHYEDWGYLCELIGSAEGDKFRRYAQGLTFDCLI 1085 Query: 909 HLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALS 968 LAN +L +LHGRYLL+R + LE++V+D WQAD +RD +TLSGGESFLVSLALALALS Sbjct: 1086 SLANLRLDKLHGRYLLKRNHNADLELQVIDGWQADTIRDIKTLSGGESFLVSLALALALS 1145 Query: 969 DLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQI 1028 D+VS+KT+++SLFLDEGFGTLD ETLD ALDAL++LNASGKTIGVISHVEAMKERI VQI Sbjct: 1146 DMVSNKTQLESLFLDEGFGTLDPETLDIALDALESLNASGKTIGVISHVEAMKERISVQI 1205 Query: 1029 KVKKINGLGYSKLESTFAVK 1048 VKK NG G+S+L S + ++ Sbjct: 1206 PVKKTNGFGFSELPSRYRIR 1225 >UniRef50_C7PNB0 SMC domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PNB0_CHIPD Length = 1244 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 199/893 (22%), Positives = 354/893 (39%), Gaps = 50/893 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL++R KNL SL+ +IDFT+EP + G+FAITGPTGAGK+TLLDA+CLALY TPR Sbjct: 1 MKILAIRFKNLASLEDTNEIDFTKEPLSKAGIFAITGPTGAGKSTLLDALCLALYARTPR 60 Query: 61 LSNVSQ----------------SQNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARN 103 + ++ TAE AEVEF V G Y+A W+ RARN Sbjct: 61 YLQAKETGIEIQDQGGNKISQGDVRGILRDGTAEGFAEVEFAGVDGNNYKARWAVKRARN 120 Query: 104 QPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLN 163 + DGNLQ VEL + K + L + GL++ +FTRS+LL+QG F AFL Sbjct: 121 KIDGNLQADTVELFNLTTNGVFPGKKTETLREIERVVGLNFEQFTRSVLLAQGDFTAFLK 180 Query: 164 AKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTA 223 A +A LLE+LTGT IY +IS ++ + K A TEL L+ Q +G+ LT E+ +L A Sbjct: 181 ADKDAKASLLEKLTGTNIYSEISVGIYNKFKEADTELRNLKQQVAGIERLTEEERMALHA 240 Query: 224 SLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAAL 283 + L + + +++W D L++ + QQA E A ++ Sbjct: 241 QQEELGAKISSQQITIAELGAAISWYQLLDTLEKNREQATDQYQQATLAMENAGERIRNF 300 Query: 284 SLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQ 343 +L + + R E H LA + ++E++ R+ T + A + Sbjct: 301 TLVEHVQAARGPVEARRSHEQQLAEKEKALQEIDARIMRTTEAQQQAATALETAHAAVLH 360 Query: 344 QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQ-LTHAEQKLNALAAI 402 QQ + R R+ + Q Q ++ + ++ Q L E+K + + Sbjct: 361 AQQEAAKHQPDITRARELDTLTGEKDRQLQQAVTEAANAQKQQDAHLKAFEEKEKEIHTL 420 Query: 403 TLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRL---AQLQVAIQNVTQEQTQR 459 ++ ++ H ++ + ++++ + Q+ K L + Q + Sbjct: 421 AQAIS--KLEDWQRDHLGRKDIAENIIEISAQLGHTAKLLPVQQEALKEQQENASFIRKA 478 Query: 460 NAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA 519 + +++++ ++ + A ++T ++ ++ L+ A + Sbjct: 479 QEQITDLQEKADKEQAESARLQTELDEANKLLQAVPL-ETLKEKDTRLDQQIREGEAAKI 537 Query: 520 YQALE---PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + + LEN ++L E+ A L+ + +T + E + L Q Sbjct: 538 HWERLFGSLQEKEKTARQLENCAQELKEKTAALQEKQAELTIAQAKKEQSDKLLHQARLQ 597 Query: 577 LTQQWQAVTASL-----------NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQI 625 + + +++ A L D+ + E L + L G I Sbjct: 598 VAENVESLRAQLVQDEPCPVCGSKAHPFVTDNPLAHAMLKTLEEEYNAALRYYNTLSGDI 657 Query: 626 AAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDE-----------EESWLATRQQEA 674 ++ Q + E + L +T A + +E+ +++ Sbjct: 658 SSLEQFCKKLLLDSETFNKSLQERVTQIASLEEKWAGFSLAAASKAAPDENKAQWLEEQV 717 Query: 675 QSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQ 734 Q Q Q E+ +ETL ++ + E + + + Q+ Sbjct: 718 QQLQTAQKEIAVQLKAYDAQRNAVETLKSQLDIKQQALSANKEQLKDRQREKTSKEEAQE 777 Query: 735 TLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRR 794 + +Q +SL+ Q + D + + + +Q KQ E Sbjct: 778 RIARQLEHITESLRTMTEQLAPHFSNPDWVDNWKKDPQGFNAKIVAFAQQWKQQAEAIIA 837 Query: 795 QAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQG 847 Q L + L + + P AL+ + +QQ+ A + +E Sbjct: 838 NNQQLR-EHQSALQEMGRQGPAIAAALSEKINALQQQQAAFNALQQERQALLN 889 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 178/882 (20%), Positives = 325/882 (36%), Gaps = 52/882 (5%) Query: 206 QASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQA 265 +A + LT E+ + L ++ + +KQ + ++ + + + Q+ Sbjct: 374 RARELDTLTGEKDRQLQQAVTEAANAQKQQDAHLKAFEEKEKEIHTLAQAISKLEDWQRD 433 Query: 266 LQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA-LAHIRQQIEEVNTRLQSTM 324 E A L ++ + + +A+ + ++QI ++ + Sbjct: 434 HLGRKDIAENIIEISAQLGHTAKLLPVQQEALKEQQENASFIRKAQEQITDLQEKADKEQ 493 Query: 325 ALRASIRHHAAKQSAELQQ-----QQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR 379 A A ++ + + LQ ++ Q+ ++ Sbjct: 494 AESARLQTELDEANKLLQAVPLETLKEKDTRLDQQIREGEAAKIHWERLFGSLQEKEKTA 553 Query: 380 EHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQ 439 L Q+L L A A + + H + + +++ +L Q+V + Sbjct: 554 RQLENCAQELKEKTAALQEKQAELTIAQAKKEQSDKLLHQARLQVAENVESLRAQLVQDE 613 Query: 440 -------------KRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQ 486 ++ + +E N + Q + E Sbjct: 614 PCPVCGSKAHPFVTDNPLAHAMLKTLEEEYNAALRYYNTLSGDISSLEQFCKKLLLDSET 673 Query: 487 EAR-IKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEE 545 + ++ Q A L+ + S A + +A +L + E+ + Sbjct: 674 FNKSLQERVTQIASLEEKWAGFSLAAASKAAPDENKAQWLEEQVQQLQTAQKEIAVQLKA 733 Query: 546 GATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQ 605 R ++ + QL + + ++ + ++ + + + L+ I L Sbjct: 734 YDAQRNAVETLKSQLDIKQQALSANKEQLKDRQREKTSKEEAQERIARQLEHITESLRTM 793 Query: 606 DEH---------------ERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTL 650 E + ++ Q + II QQ+ + Q L Sbjct: 794 TEQLAPHFSNPDWVDNWKKDPQGFNAKIVAFAQQWKQQAEAIIANNQQLREHQSALQEMG 853 Query: 651 TGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHC 710 E+ + L +Q + QQ + L + + L Q E Sbjct: 854 RQGPAIAAALSEKINALQQQQAAFNALQQERQALLN----GATVISFEQRLKQVIEQAVL 909 Query: 711 EETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA------SVFD 764 + E + E A + + T ++ K +A L+ S Sbjct: 910 TQQTATEVFNTGKEDLRAYTASKDTTTADITNIRSNIDKERAAIGAWLKNYTATYGSTLT 969 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 ++ + + L + Q + + + L+ HQ+ R D + Sbjct: 970 EETLTQLLSHTAAWIETERKAITALRDAVNTTQATLIERSLQLSNHQEKRVSD-----QS 1024 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 +E + + Q L + + + +L+QD +N+ + L I T E+W LN Sbjct: 1025 LEALTASSNEAKQVLEDLGREKNNLAYRLRQDEENKLKIGDLQYTIDAKTAVHENWSKLN 1084 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADA 944 LIGS +G KFR+ AQ TLD L+ AN L+ L RY L R L ++V+D D Sbjct: 1085 ELIGSADGKKFRQIAQEYTLDMLLDHANMHLSMLTRRYKLLRIP-GNLALQVLDKDMGDE 1143 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 +R +LSGGESFLVSLALAL L+ L S K +++SLF+DEGFG LD +TL+ A+DAL+ L Sbjct: 1144 LRTVFSLSGGESFLVSLALALGLASLSSSKMKVESLFIDEGFGALDPDTLNIAMDALERL 1203 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFA 1046 + G+ +GVISHV+ M ERIP QIKV ++ G SK+E T A Sbjct: 1204 HNQGRKVGVISHVQEMTERIPTQIKVIRMAN-GKSKVEVTGA 1244 >UniRef50_C5CAA1 Exonuclease SbcC n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5CAA1_MICLC Length = 1009 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 190/1059 (17%), Positives = 332/1059 (31%), Gaps = 77/1059 (7%) Query: 6 LRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVS 65 +RL+ L +DF R + GLF + GPTGAGK+T+L A+C ALY P + Sbjct: 1 MRLEGLGPYAQAQDVDFDR--LNAGGLFLLDGPTGAGKSTVLAALCFALYGTVPGGRSAE 58 Query: 66 QSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGN-------LQVPRVELAR 118 L +VEF V+G + S R + + V L Sbjct: 59 SLVTTLREPGAVIPEVQVEFTVQGRRFEVVRSPKHERPRRRRSAAGGATVTTQATVSLRE 118 Query: 119 CADGKILA--DKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEEL 176 DG+ A + + + A + LD +F + +LL QGQFA FL AK ER LL L Sbjct: 119 RVDGEWTAPLTRADEVGQQIAAVLHLDAEQFMQVVLLPQGQFAQFLIAKSDERRVLLRRL 178 Query: 177 TGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLI 236 GT+ + + + R E +L + L +L + Sbjct: 179 FGTQRFDGVEEHL-------RVETARLDTAVAVDADAARTARAQLAEALHEALGPDWHAP 231 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 L L + + + L A A E++A+ + L W Sbjct: 232 EPSPDTDDRLLVL-AAERAGRAHEDARAGLATARAAEQRARVTVRELETRGRDLAAAEAW 290 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 A A + + + + A A + D Sbjct: 291 ASRRRDHDAEAETAAARRRAVDAHERAGRVLTAGQRATAAADAAGTTSEAVTEVLAHVED 350 Query: 357 RFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 A + + R L + ++ + + + A Sbjct: 351 EPTAAAWLAAARADGAADAPASRRALGEAERAAEAVARSVRDRDRMRELEQEAAAAAERR 410 Query: 417 QHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQ 476 ++ R LV + L + + A++E R Sbjct: 411 AEIDR--DRAALVESRPEREAAVAALRSAVERGTERLGVREAVDRAVDEAAARRTAAEAA 468 Query: 477 LADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 A + + + +R++ L A E + L PG + + E Sbjct: 469 AARAVEVETAARAHREAQERRSEAAERHVGLLRARYEQAASELAERLVPGEPCAVCGSPE 528 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLD 596 + + + + + A +A Q + + Sbjct: 529 HPAPAATADTTVTEADVRDAEQARTAADRAATDAETALRAAEQTLRTAREA-----AAGL 583 Query: 597 DIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALT 656 + +A D E + L Q + + ++ L A Sbjct: 584 APEAAREALDRAEAERAALDQAAKDLAADRRRLAAAEKEHAGADETAATLTAEDGRLAEA 643 Query: 657 LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 S L + A + L Sbjct: 644 AAHRAARLSELRDAVEAA-----------------------------------RGDAETL 668 Query: 717 ENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + R + + Q +D A + AL FDD A AA ++E Sbjct: 669 DARRDQVTAARRVLAALAAAQDEDARARAVADETGQALTAALAEQHFDDVDAARAARLEE 728 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 Q + +R + L + + LA Sbjct: 729 TEAAARTAAVQEWDAERARLAELEASEPVRRGRALAE-AGVEPPTEEQTRAAAEALAAAE 787 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 T+ G + + ++++ A + + L L+ + + Sbjct: 788 AASSSRATAVGRLDSLVATVRRQSAALTEVLERSAGLIAEHTRVRGLLDLVRGGGENLLK 847 Query: 897 ----KFAQGLTLDNLVHLANQQLTRLHG-RYLLQRKA------SEALEVEVVDTWQADAV 945 + L+ + A ++L + RY ++ ++ LE+ + D + D Sbjct: 848 MPLTSYVLAGRLEEVAAAATERLLAMTDQRYSIEYSDAVGGRGNKGLELVIRDHYV-DET 906 Query: 946 RDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 R TLSGGE+F+ SLALAL L+D V + +D+LF+DEGFG+LD++TLD LD +D Sbjct: 907 RHPATLSGGETFMASLALALGLADTVQAEAGGIELDTLFVDEGFGSLDADTLDDVLDVVD 966 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 L G+T+G++SHVE M++ I V+++V+K + Sbjct: 967 TLRTGGRTVGLVSHVERMRQEIGVRLEVRKDRRGSSLAV 1005 >UniRef50_C6CBT2 SMC domain protein n=1 Tax=Dickeya dadantii Ech703 RepID=C6CBT2_DICDC Length = 1227 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 324/979 (33%), Positives = 475/979 (48%), Gaps = 109/979 (11%) Query: 178 GTEIYGQISAMVFEQHKSARTELEKLQAQASGVTL-LTPEQVQSLTASLQVLTDEEKQLI 236 + Y + A +Q + L + Q Q + E+++ L + E+ L Sbjct: 250 QLQHYQEALATSVQQRSALDIALIQSQPQMDRLARSEPAEKLRPLYNERERCAREKSLLT 309 Query: 237 TAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW 296 +Q + +L + + + + Q+A AE + Q L + +++ Sbjct: 310 RQITSVKQQIGQYQTALKLLKTQAEKTLSDQKAHAEHRQQQEDLVNERILPLDQHIATQQ 369 Query: 297 ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN------T 350 A+ L + ++ + + L + + + R A QQ + Sbjct: 370 ALRAQRQQTLDQLNERQKNLIASLDNLQRQQQATRLRLEDIDAYRQQNAIHQHWGSHIPL 429 Query: 351 WLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE 410 W + + ++W + + + +QQ E+L Q +Q L+ +Q + A++ Sbjct: 430 WQAQFPQQQKWQQDRQIQQEKANQQQVQAEYLEQQRQTLSEQQQAQSDAQERARQRLAEQ 489 Query: 411 ---------------VATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQE 455 + LA++ QR RQ L + + L+ Q+ Sbjct: 490 QQHYEQQEAALPISDLQQQLARNVAQRHDRQQLATSAAVLQRLLSQRTLLETQRLGSRQQ 549 Query: 456 QTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHP 515 Q A R Y+ + + L D++ E E I +LE++R QLQ G+ CPLCGST HP Sbjct: 550 LEQLEDAQVRQRLDYQRQAEHLRDLEKRYELEQHIVSLESERQQLQLGKECPLCGSTHHP 609 Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 AVE YQAL P Q RL L EV+ L Q++ + Q Q+ +N S++QD Sbjct: 610 AVERYQALRPSETQIRLQTLRQEVETLRATVVQTDTQINLLQHQRQQQQNALDSVQQDLS 669 Query: 576 ALTQQWQAVTASLNIT--LQPLDDIQPWLDAQDEHERQLRL------------------- 614 AL QQ A++ L I Q L+ + WL + +E E+ L+ Sbjct: 670 ALEQQCVALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQAHIADRERQSRQIQESKDLL 729 Query: 615 -----------------LSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTL 657 QR L + Q + + Q++++ Q + TL G+ L+ Sbjct: 730 TSASQLLQQTEQQLALNQQQRDALTLAQSELQQTLEKITQELQRLHQAISQTLEGFGLSA 789 Query: 658 PQEDEEESWLATRQQEAQSWQQRQNELTA-------------------------LQNRIQ 692 P+ +++ WL RQ E WQ+ ++E ++++ Q Sbjct: 790 PELTQQDDWLRQRQLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREETNLAIKSQHQ 849 Query: 693 QLTPILETLPQSDEL-----------------------PHCEETVVLENWRQVHEQCLAL 729 QL + +L Q+ + E W+ L Sbjct: 850 QLAELQRSLEQAQQQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQNSQSHISHL 909 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNL 789 + + +L+QQ A +L A QF AL+ + F D+ F AL+DE T QL LK+ L Sbjct: 910 NGELGSLEQQHQRADDALNAATEQFGAALRETEFQDEADFRQALLDESTRHQLMMLKERL 969 Query: 790 ENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEI 849 +++Q +++ Q TL H Q++P ++ I Q LA L+ QGE+ Sbjct: 970 NQRQQQVESVHQQAENTLDHHLQNKPASMPE-GISHHDIHQLLAGLGDMLKNEVRHQGEL 1028 Query: 850 RQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVH 909 RQQL D R +QQ L+ ++ + Q+ EDWG LN LIGS+ GDKFR+FAQGLTLD+LV+ Sbjct: 1029 RQQLAGDQQLRDKQQALLNEVERSRQRSEDWGCLNQLIGSQRGDKFRRFAQGLTLDHLVY 1088 Query: 910 LANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSD 969 LAN+QL+RLHGRYLLQRKA++ LE++V DTWQADAVRDTRTLSGGESFLVSLALALALSD Sbjct: 1089 LANRQLSRLHGRYLLQRKAADTLELQVADTWQADAVRDTRTLSGGESFLVSLALALALSD 1148 Query: 970 LVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIK 1029 LVS+KTRIDSLFLDEGFGTLD ETLDTALD LD LNASGKTIGVISHVEAMKERI VQI+ Sbjct: 1149 LVSNKTRIDSLFLDEGFGTLDEETLDTALDVLDNLNASGKTIGVISHVEAMKERIQVQIR 1208 Query: 1030 VKKINGLGYSKLESTFAVK 1048 V+K NGLG S+L+S +AVK Sbjct: 1209 VRKRNGLGISQLDSEYAVK 1227 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 275/941 (29%), Positives = 408/941 (43%), Gaps = 33/941 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKILSLRLKNLNSL+GEWKIDF R PF +N LFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MKILSLRLKNLNSLQGEWKIDFARAPFVNNSLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS SQN++MTR TAECLAEVEFEV+G AYRAFWSQ RA + P+GNLQ PRVELARCA Sbjct: 61 L-KVSPSQNEVMTRHTAECLAEVEFEVQGTAYRAFWSQRRAHDNPEGNLQPPRVELARCA 119 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKIL D+V DKL L A +TGLD+GRFT+SM+LSQGQFAAFLNA ERAELLEELTGT+ Sbjct: 120 DGKILTDRVNDKLALIADITGLDFGRFTKSMMLSQGQFAAFLNADANERAELLEELTGTD 179 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYGQIS VFE+HK ++ LE LQAQ + + L++ EQ SL L VL +E L + Sbjct: 180 IYGQISEQVFEKHKQSQARLETLQAQVATIELMSDEQRTSLEQQLAVLQQQENDLALQRD 239 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + W + Q+ + Q ++QPQ+ L+ ++PA LRP + Sbjct: 240 EILAHQRWYEQLQHYQEALATSVQQRSALDIALIQSQPQMDRLARSEPAEKLRPLYNERE 299 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE-HDRFR 359 + + + +QI V ++ ++ A K ++ + + ++R Sbjct: 300 RCAREKSLLTRQITSVKQQIGQYQTALKLLKTQAEKTLSDQKAHAEHRQQQEDLVNERIL 359 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD---------- 409 + A +A +Q+ + L + Q+ L + L T D Sbjct: 360 PLDQHIATQQALRAQRQQTLDQLNERQKNLIASLDNLQRQQQATRLRLEDIDAYRQQNAI 419 Query: 410 ------EVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 + AQ +Q+ +Q + QQ + L+ Q ++++Q ++ A Sbjct: 420 HQHWGSHIPLWQAQFPQQQKWQQDRQIQQEKANQQQVQAEYLEQQRQTLSEQQQAQSDAQ 479 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 RQR E+ Q + + L AQ Q + + L Sbjct: 480 ERARQRLAEQQQHYEQQEAALPISDLQQQLARNVAQRHDRQQLATSAAVLQRLLSQRTLL 539 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 E SR LE + + Q + + +R E E + + + Q Sbjct: 540 ETQRLGSR-QQLEQLEDAQVRQRLDYQRQAEHLRDLEKRYELEQHIVSLESERQQLQLGK 598 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 T P + L + R L + L+ + + QI Q Q +Q+Q Sbjct: 599 ECPLCGSTHHPAVERYQALRPSETQIRLQTLRQEVETLRATVVQTDTQINLLQHQRQQQQ 658 Query: 644 QLLLTTLTGYALTLPQEDEEE---------SWLATRQQEAQSWQQRQNELTALQNRIQQL 694 L + + Q L Q S ++++ L A ++ Sbjct: 659 NALDSVQQDLSALEQQCVALSKHLLIDFDPQQLERLTQWLTSCEEQEQSLQAHIADRERQ 718 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + ++ + +Q AL Q LQQ Q LQ+ Sbjct: 719 SRQIQESKDLLTSASQLLQQTEQQLALNQQQRDALTLAQSELQQTLEKITQELQRLHQAI 778 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 L+ + Q + + ++N ++ ++ + Sbjct: 779 SQTLEGFGLSAPELTQQDDWLRQRQLEWLRWQENEHEHHQK-----QPYLSAVSADIESS 833 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 + ++ Q+LA+ + L + + + + + +Q + Sbjct: 834 QRQREETNLAIKSQHQQLAELQRSLEQAQQQRWQWFGNKVVNETLTELRQRSQLLERENQ 893 Query: 875 QQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL 915 Q W S I G+ Q D+ ++ A +Q Sbjct: 894 QAQIQWQNSQSHISHLNGELGSLEQQHQRADDALNAATEQF 934 >UniRef50_B2HL37 Chromosome partition ATPase protein n=1 Tax=Mycobacterium marinum M RepID=B2HL37_MYCMM Length = 1002 Score = 251 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 183/1041 (17%), Positives = 357/1041 (34%), Gaps = 63/1041 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L LR+K L S + E +I+F+ AI G TGAGK+++L+AI ALY+ T Sbjct: 1 MRPLRLRIKGLRSFRSEVEINFSELALV-----AIVGDTGAGKSSILEAITYALYNATTW 55 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + L++ +++F G+ YR S +R + P G+L Sbjct: 56 EQRGVK---QLISDGATTMTVQLDFACDGQRYRITRSTSRGQYPPPGHLLE-----YLSD 107 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 D + L GLD+ FT +++L QG F L A P +R E+L+ + Sbjct: 108 PTIRPLDGEEAIKREIFRLVGLDWKGFTSAVILPQGSFQTLLQAPPADRTEILKGIFRLH 167 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 G + R LEKLQA + + +L + Sbjct: 168 ELGLVREQAQTLAGEYRGSLEKLQADRVQLLPDPKAAANEAAGRKRKAEKFANKLREFRT 227 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q + Q E ++QA A + LRP E + Sbjct: 228 QVTEQQKAANMQTEAAARLRDTATLVEQANTHPAAA------------LQALRPVLEELD 275 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + L ++++ + R + + + A + + L+ + + Sbjct: 276 KRAVGLDRDERKLQRSDERASAAIERAEAAGESEATLARAQTVLSRLLSDLPELAAEKTR 335 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 E + Q SD E L+ + E+ L + L + Sbjct: 336 LEEERQALELEAKQLVSDEESLQLLRAAALEKERALKTIEKEVLAAS------------- 382 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 Q + + + EQ L + R + + Sbjct: 383 --NALQKASERLEEYRRLALEERTAAKTLAALEVEQQGAEKNLAKARAAEHQARSEAETA 440 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 R L G CP+CG T + +A + + + Sbjct: 441 AAALAHIQRKHAAAHAAQGLGPGDGCPICGQTIPAGFKPPRAQR----ERAASKTNEDAR 496 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 ++ E +R +L+ +QL ++A++ Q T+ + D+ Sbjct: 497 RVQTEARDVRVKLEERCRQLGESIDQARTTSQTASRATKNAFRGLRAALGDADADPDVSK 556 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 ++ R + + + +G+ A + ++ R+ L T + + Sbjct: 557 AALLEELTTRLHKQEAAAAKARGKAEAARLAFERRAAALQPRRDALSTRRQALERSNVKH 616 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 ++ LA ++ + A +R+ + L E + + Sbjct: 617 SKQAEALAA--DRLTLPERFRPAANASVDRMGSVAERLRKRLDEVSGIRLERERIQRRFA 674 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 ++ + AL ++Q + + L++A + L + + A A ++ Sbjct: 675 ELRSERNALAERRQ---EDFESPRRRLEQAALMLHSRLSDAA---EIAHTEAPSFPESDI 728 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQ-ELAQTHQKL 839 + + A ++ + Q + + + + ++L Sbjct: 729 DFGAFVEAVAALEASAARVLDGLHGRASDADQAAERARQTIGTLLAKADAPTIDALDEQL 788 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFA 899 + + + + L +++ + + G L++L +F F Sbjct: 789 IAARATFTRAKDDEVYAREQIPKVVALEEKLGPLREA---IGTLDTLASMLTDGRFIGFV 845 Query: 900 QGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLV 959 L+ +A++ + G + A + ++D + R RTLSGGE+FL Sbjct: 846 VARRQRALLGVASEIFGSMTG-----MRYGFAEDFRIIDR-ISGQPRGARTLSGGETFLA 899 Query: 960 SLALALALSDLVSH-KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVE 1018 SL+LAL L +L + R+++LFLDEGFG+LD++ L AL L+ A+G+ + VISH+ Sbjct: 900 SLSLALGLVELAARSGGRLEALFLDEGFGSLDADALQEALGELERRAATGRLVAVISHIR 959 Query: 1019 AMKERIPVQIKVKKINGLGYS 1039 A+ E I ++V Sbjct: 960 AVAESIESVLRVNYRPEGSEI 980 >UniRef50_Q480G6 Exonuclease SbcC n=5 Tax=Gammaproteobacteria RepID=Q480G6_COLP3 Length = 1308 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 260/930 (27%), Positives = 408/930 (43%), Gaps = 66/930 (7%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR +N+NSLKG WKIDF+ PF +NGLFAITGPTGAGKTT+LDAICLALYH+TPR Sbjct: 1 MRILSLRFENINSLKGSWKIDFSEAPFDNNGLFAITGPTGAGKTTILDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L VS+ QN LMTR T+ C+AEVEFEV+G+ YRAFWSQ RARN+ DGNL P ELA+ Sbjct: 61 L-TVSKKQNQLMTRHTSHCMAEVEFEVRGQGYRAFWSQKRARNKLDGNLLEPVAELAKL- 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG I++DK+K + LTGL++ RFT+SM+LSQG+FAAFL ++P +RA+LLE+LTGTE Sbjct: 119 DGTIVSDKLKMVRSDISELTGLNFSRFTKSMMLSQGEFAAFLTSQPNDRAQLLEQLTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG IS VF+ H+SA L+ LQAQ+ GV+LL EQV++L L +T++EK + Q Sbjct: 179 IYGDISKQVFDNHRSASEALKLLQAQSQGVSLLDDEQVKALEQQLTEITEQEKTVNAQLQ 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW---- 296 Q QQ W T +Q + L + +E A+ L L+L+ A ++ + Sbjct: 239 QAQQVKAWCTNFSVNEQNQHAAKTQLLEIEKKELAAKQDLDLLTLSSLAEPIKAPYEKMV 298 Query: 297 ---ERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQ 353 E+ + + +Q+ ++ + + +++ + A+ + +Q L+ +Q Sbjct: 299 HYREQYQQTLQQVTSQTEQLAILDQDIVVSDEALTLLKNRHVEAEAQRKVIEQVLHDKIQ 358 Query: 354 --------EHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL--AAIT 403 + + + N A + L Q+ Q+ A Sbjct: 359 PLDHNITHQQNALTETKNTIAEQSETLGVNANALTALEAEHQKAQETVQQQQAYLSQGQA 418 Query: 404 LTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNV-------TQEQ 456 L +++ Q+ + L+ ++VAL + +K L LQ Q E Sbjct: 419 LAKLPEKLPLWQNQYQQLSQLQANVVALVNEQDNTEKALLTLQTRQQEQQLQITQSEDEL 478 Query: 457 TQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPA 516 Q N+ M ++ ++ Q + I + G L G + A Sbjct: 479 KQLNSRKQLMGEKTQQLIQHSQAAQAILSSRVTSTSTSTGNNDKGEGVVNELTGGMLNQA 538 Query: 517 VEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQA 576 + Q + + Q++ LA V L +E L Q +QL E LRQ A Sbjct: 539 ILDRQNQQLALKQAQQLAQRFHV--LTQEQQGLSAQQSQDKQQLVITEQALVKLRQRYSA 596 Query: 577 LTQQWQAVTASLNITLQPLDDIQPWLDAQ-------------------------DEHERQ 611 QQ + V L + + Q + +R Sbjct: 597 TQQQKKDVETLLAQQQTIMALSEHRAKLQPEESCPLCGSTDHPAINEYRSLDSDEHQQRL 656 Query: 612 LRLLSQRHELQGQIAAHNQQIIQYQQQIE---QRQQLLLTTLTGYALTLPQEDEEESWLA 668 +L +R +L+ Q N Q+E R Q + + + A + + L Sbjct: 657 SQLTLERAQLEKQGKELNGVQANLTAQLEMQTNRLQGITSEQSNLAQNWQSLNINQYVLL 716 Query: 669 TRQQEAQSWQQRQNELT---------ALQNRIQQLTPILETLPQSDELPHCEETVVLENW 719 ++ +++ S Q E + + L L+ Q+ + + + + Sbjct: 717 SQNEQSFSLQNVDVEQSINHQLTMVFGQLEELLLLQTSLQENSQNQQQNSEQISHCEKQL 776 Query: 720 RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTL 779 + Q L Q + Q + L+ Q F L A + D + L Sbjct: 777 STLFNQLQLLEEQGKNQQGSKQKFTEELRLKQQAFLE-LNAQLLADIKTTEITLPLGGVN 835 Query: 780 TQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL 839 ++++ Q ++ QA+ LV E + + D T + + +L L Sbjct: 836 EKIKEQDQEQNLEQEQARKLVICIDEKWLESLSKQGADYQQTVTTHQAAKTQLDSLVNDL 895 Query: 840 RENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + Q+ Q QQ+ + Q Sbjct: 896 GLLKQQVVHQQNQVTQIKSQLTQQENDLIQ 925 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 228/890 (25%), Positives = 383/890 (43%), Gaps = 32/890 (3%) Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 GQ A + E+ + + ++L + V L EQ + +L L +++ Q Sbjct: 416 GQALAKLPEKLPLWQNQYQQLSQLQANVVALVNEQ-DNTEKALLTLQTRQQEQQLQITQS 474 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEH 302 + L L + +L E +++ QA ++ + S + E Sbjct: 475 EDELKQLNSRKQLMGEKTQQLIQHSQAAQAILSSRVTSTSTSTGNNDKGEGVVNELTGGM 534 Query: 303 SAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWN 362 RQ + + Q + SA+ Q +Q L Q + RQ Sbjct: 535 LNQAILDRQNQQLALKQAQQLAQRFHVLTQEQQGLSAQQSQDKQQLVITEQALVKLRQRY 594 Query: 363 NEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQR 422 + + + ++ + L+ KL + L + D A + + Sbjct: 595 SATQQQKKDVETLLAQQQTIM----ALSEHRAKLQPEESCPLCGSTDHPAINEYRSLDSD 650 Query: 423 PLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK- 481 +Q L L + +K+ +L N+T + + L + Q + Sbjct: 651 EHQQRLSQLTLERAQLEKQGKELNGVQANLTAQLEMQTNRLQGITSEQSNLAQNWQSLNI 710 Query: 482 -TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 ++ Q ++ L N ++ Sbjct: 711 NQYVLLSQNEQSFSLQNVDVEQSINHQLTMVFGQLEELLLLQTSLQENSQNQQQNSEQIS 770 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQ------P 594 ++ +TL QL + +Q + + Q ++ + Q + + A L ++ P Sbjct: 771 HCEKQLSTLFNQLQLLEEQGKNQQGSKQKFTEELRLKQQAFLELNAQLLADIKTTEITLP 830 Query: 595 LDDIQPWLDAQDEHERQLRLLSQR------HELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 L + + QD+ + + +++ + ++ Q + + L + Sbjct: 831 LGGVNEKIKEQDQEQNLEQEQARKLVICIDEKWLESLSKQGADYQQTVTTHQAAKTQLDS 890 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQ-----------NRIQQLTPI 697 + L Q +++ + + + + + +L+ +Q + Sbjct: 891 LVNDLGLLKQQVVHQQNQVTQIKSQLTQQENDLIQDYSLRVTHFVELGITGEDMQDSVLL 950 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 E++ EL E TV + + Q T + A+ + Sbjct: 951 RESINSQRELSEAEFTVADQRHNEKKAAQQLNRGQLTTSKSLLDNLFPKNDNAKKDWLAL 1010 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDD 817 L S F D++ FL AL+ + L +L ++++ ++QA+ L++Q+ + + + Sbjct: 1011 LTDSKFTDEEEFLLALLSAERKHDLTKLANDIDDSKKQAKILLSQSEKITLELNVQKDTL 1070 Query: 818 GLALTVTVEQ--IQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 V + + + L L++ + G+ QQ++QD N+ QQ+TL++QI Sbjct: 1071 SEKGAVDFVESSVSESLVNLSDLLKQCQQNIGQFSQQIEQDNSNKIQQKTLLEQIKLAQD 1130 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 ++D +LN+LIGS +G KFRKFAQGLTL NLVHLAN QL RL GRY LQ + ++ LE+E Sbjct: 1131 ALDDLSHLNALIGSADGAKFRKFAQGLTLANLVHLANAQLERLFGRYQLQCQQNDTLELE 1190 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 V+DTWQ D RD +TLSGGESFL+SLALALALSDLVS+KT IDSLFLDEGFGTLD+ TL+ Sbjct: 1191 VLDTWQGDTARDIKTLSGGESFLISLALALALSDLVSNKTSIDSLFLDEGFGTLDNNTLE 1250 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTF 1045 ALDALD LNASGK IGVISHV+A+KERI VQIKVKK++GLG S L+ + Sbjct: 1251 VALDALDNLNASGKMIGVISHVDALKERIGVQIKVKKLSGLGVSSLDKQY 1300 >UniRef50_Q10XV9 Exonuclease SbcC n=2 Tax=Oscillatoriales RepID=Q10XV9_TRIEI Length = 1016 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 188/1073 (17%), Positives = 368/1073 (34%), Gaps = 87/1073 (8%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L+LKN S +DFT A I GP GAGK++LL+AI A++ Sbjct: 1 MIPQKLQLKNFLSYHQAT-LDFTGLHTA-----CICGPNGAGKSSLLEAIAWAIWG---- 50 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 ++ + +++D+++ E + F G YR + R ++ + Sbjct: 51 -NSRAATEDDIISLGEKETRVDFTFSTHGNIYRVIRGRRRGQSPTLEFQVNTGSQFK--- 106 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + V+ + LDY F S L QG+ F+ +P ER E+L L + Sbjct: 107 --SLTQKGVRATQQSIIEYIKLDYETFVNSAYLRQGRADEFMLKRPNERKEILASLLKLD 164 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + + + + ++E L+ EQ +++ L QL Q+ Sbjct: 165 QYDTLGEKAKDIARQFKAKVEILEQSLEANEKQL-EQKEAIAQQQNNLKAILAQLQQKQE 223 Query: 241 QEQQSLNWLTRQDELQQE-----------ASRRQQALQQALAEEEKAQPQLAAL-SLAQP 288 ++Q L L + +Q + Q + E + Q Q L ++ Q Sbjct: 224 TDRQQLKELQTKQHERQTWQKLLQGQQQQYDKLVQECSRLKQELKATQQQQDELIAVLQQ 283 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 + + A + + ++ L+ + L+ R K +QQ + L Sbjct: 284 ENEINAGYVHFQNLQATEESLSAKFKKHQNALKQSQQLQEKQRQELQKLENNIQQFRGQL 343 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDR---EHLRQWQQQLTHAEQKLNALAAITLT 405 N+ ++ ++ ++ + R L + Q ++T Q+ L Sbjct: 344 NSLKEQEQENLNVLSKRTDIETALAELQAARVKLNELDKLQVEVTPLVQQRQKLQTELEK 403 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 A ++ LRQ Q+ + + + N Q + E Sbjct: 404 RQARLSVRLEELNSRVCQLRQTQQQKQPQLQATLQEVVAEIAVLDNKRVYQERVREKGQE 463 Query: 466 MRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQ--LQAGQPCPLCGSTSHPAVEAYQAL 523 Q + D +T + + L + + P C P E + L Sbjct: 464 RHQFLERLIGNKKDYETRLAELGQKLQLLNIGSNNGKVEVKEYPPCPLCDRPLDEHHWHL 523 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 +Q++ + + + E+ ++ + + ++ + E L + Sbjct: 524 VVDKHQTQQKEIRDLLWVTREQLTISEREIQVLRTEYRQIDEEL----GKYDQLRESRGG 579 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + L+ Q +Q ++ + ER L L +++ QQI Q+ Sbjct: 580 LQVQLDNIKQDESLVQELVEEVAKVERSLHTGDFAVNLYAELSTLEQQIQQFNYD----- 634 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQ 703 + EEE L + + + + +L ++ + ++ + L Q Sbjct: 635 ----------ERSHSLAREEEKKLRWAEIKYGQIKDAEIKLGKVRALMPEIEEKIVGLKQ 684 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 E + +Q + + ++++ L+ +A + Sbjct: 685 DLE---------------LQKQSSQIQQEIVVIEREIAEIGYDLELHNNVRLELRKAQFW 729 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + L + L+ Q +T ++ + + L Sbjct: 730 LT--KIEKLRQAHKQYPYLIERINELKAVIENRQQDLTDIKSQVS-ILNQQLEKTPELDE 786 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 + + +++ Q+L E S G + QQLK + + Q ++++ +Q + L Sbjct: 787 KIIYLDKKIQVRRQELDETLGSLGSLEQQLKHLENLQLQNGKQLEELQTTKRQYRVYQEL 846 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL---------LQRKASEALEV 934 + G + L L NQ L RL L + A + Sbjct: 847 SLAFG---KKGIQALMIENILPQLEAETNQILARLSANQLHIQFVTQKATKGSKKNARWI 903 Query: 935 EVVDTWQADA--VRDTRTLSGGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLD 990 + +D ADA R T SGGE+F V+ A+ LALS L++ T + L +DEGFGT D Sbjct: 904 DTLDILIADAKGTRPYETYSGGEAFRVNFAIRLALSKLLAQRSGTALQMLIIDEGFGTQD 963 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 +E D + A++A+ I ++H+ KE +I+V K L Sbjct: 964 AEGCDRLIAAINAIATDFSCILTVTHIPHFKEAFQARIEVSKTAQGSQIILSV 1016 >UniRef50_A5URR1 SMC domain protein n=2 Tax=Roseiflexus RepID=A5URR1_ROSS1 Length = 1022 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 183/1064 (17%), Positives = 369/1064 (34%), Gaps = 74/1064 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L L+N + F + + G GAGK+ LLDAI AL+ E Sbjct: 1 MIPRKLALQNFMCYREG----LPPLEFDGMSIACLAGENGAGKSALLDAITWALWGEA-- 54 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +S +DL+ E + E+EF + G+ YR + R + L + Sbjct: 55 ---RLKSDDDLVALGATEMMVELEFTLDGQDYRVIRRRIRGKRGGQSQLDFQVRDG--NE 109 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + +++ +L +DY F S L QG+ F +P +R ++L ++ G Sbjct: 110 WRSLTPGGIRETQQLIIRTLRMDYEMFANSAYLRQGRADEFTRKEPAKRKQVLADILGLS 169 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTP------EQVQSLTASLQVLTDEEKQ 234 IY ++ E+ +S ++ L+ Q + E+V + + + Sbjct: 170 IYEELEGRAKERARSTEGQIRGLEGQIGELRRQAERYDLLVEEVHTAEERVADAMKRVEA 229 Query: 235 LITAQQQEQQSLNWLTRQDELQQEA-----SRRQQALQQALAEEEKAQPQLAALSLAQPA 289 A ++ S+ L + ++ RR++ QA + + + Q A S Sbjct: 230 ARLALEEATASVQKLEQVRTIRDNLHTQTQRRRREREDQAQWLDRQMETQKRAESWIARR 289 Query: 290 RNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLN 349 + + A + +E + AL ++ + ++L+ + + Sbjct: 290 AEIEEGIRLLRAAKAECDRLAALRDEYDHLQSRRAALAQALANAEHAIRSDLRVAETQVQ 349 Query: 350 TWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD 409 T + R + E AQ ++ E L + + ++L + + T Sbjct: 350 TLRERAARRPKLAAELQRLAAQLAEHPPIAEALSAARTRRATLTERLRRVNELLRRRTEL 409 Query: 410 EVATALAQ------HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAAL 463 E L EQ+ + L + LA+ + QE + Sbjct: 410 ESDIKLKHDSLVATREEQKRTLRTLAEQLKHEARWRTELAEATAERARLEQEAAHLDTLR 469 Query: 464 NEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS-HPAVEAYQA 522 ++ R ++ A+ +T+ +Q +I + CPLC S H + QA Sbjct: 470 DDERALAEKIGAIRAECETVKKQGDQINEKLRLLGP--DLKVCPLCKSELGHDGIAHIQA 527 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQ 582 E LR Q A ++ E + LR D + + + Sbjct: 528 E------------------YERERQALRQQYAAAKREADHLEAHLKRLRNDIRTIEARVN 569 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 + + ++ + + RL + + E Sbjct: 570 TLPDVQGRIARLESELAKCDVCRQQQIEAQRLHDDVA------------LRLLKNDYEPA 617 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L + L D E +A +++ + + R E ++Q +I L ++ + Sbjct: 618 AREELKRIDAEINALGSVDALEREIAAVERQVAALEDRSREQASVQAKIDGLQREIQQID 677 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 D H +E +V Q+ + A + +AA + + A ++ Sbjct: 678 SEDPALHEQEQIVAALSAQLAQGDFAHTERAALADIDRQIAALGYSRERYDQAQADVQAL 737 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 ++ + E+ L + + RQ + E + + R D Sbjct: 738 VHWEEDLIRLQRAEEWLAENRDELARAAERLRQLDAQIAADEEEVRSLDE-RLCDLAPAA 796 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 + L + + ++ GE + L++ + + ++ + Sbjct: 797 RARAEAAARLDELNHEVMARQKDLGERQADLRRAQEATSALAEAEAHRQALLERKGLFDE 856 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGR-----YLLQRKASEALEVEVV 937 L G + L L AN+ L+R+ + QR + E + Sbjct: 857 LTQAFG---KKGIQAMLIETALPELEREANRLLSRMTDNQLHLTFETQRDTKKGEVAETL 913 Query: 938 DTWQADA--VRDTRTLSGGESFLVSLALALALSDLVSH--KTRIDSLFLDEGFGTLDSET 993 D ADA R SGGE+F + A+ +ALS L++ R+++L +DEGFG+ D+ Sbjct: 914 DIKIADALGTRVYDAYSGGEAFRLDFAIRIALSKLLARRAGARLETLIIDEGFGSQDARG 973 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLG 1037 + ++A+ ++ + + VI+H++ +K+ PVQI++ K Sbjct: 974 RERLVEAIISVQHDFRRVLVITHIQELKDMFPVQIEIVKTPNGS 1017 >UniRef50_D0ZEW9 Exonuclease n=2 Tax=Edwardsiella RepID=D0ZEW9_EDWTE Length = 1233 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 271/911 (29%), Positives = 395/911 (43%), Gaps = 30/911 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+NSL+GEWKIDF+ PF +GLFAITG TGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +S SQN+LMTR TAE LAEVEFEVKG YRAFWSQ RA N+PDG LQ R ELAR Sbjct: 61 LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAIRAELARLD 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DG IL DK+ DKL+ A LTGLD+GRFT+SM+LSQG+FAAFLNA +RAELLEELTGTE Sbjct: 121 DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGEFAAFLNADAGKRAELLEELTGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG++S VF + K A+++L+ L+ +A+GV LL+ Q ++L ASL +E+ L Sbjct: 181 IYGRLSEAVFARFKQAKSDLDALRERAAGVELLSDAQREALQASLTHAQTQEQALRAQLT 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q QQ WL RQ E +Q S+ Q QA QPQL L+ A+PA LRP+++ + Sbjct: 241 QAQQQQAWLRRQQEQRQALSQAQTQAAQAEQHWLALQPQLLRLTHAEPALRLRPYYQSLT 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDR--- 357 + L Q ++ RLQ+ A RA ++ + QQ +Q + Sbjct: 301 QAEEDLRQADAQQHQLEARLQAAAAQRAPLQQALQQAQQAWQQLRQRRDETQALIAERVL 360 Query: 358 -FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALA 416 ++ + SQQ + + Q Q ++ A Sbjct: 361 PLDNALSKQEEAEQRLSQQWQESQRQLQDLQAQQQQLSAQQEAQRQQHAALQRQLDAARQ 420 Query: 417 QHA------EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRY 470 + L + L + +LQ IQ++ +++ R L ++Q Sbjct: 421 HAQWGERLPRWQMLLERRGVLSDDGLRLSAERTRLQQEIQHLCRQRDARQETLLGLQQDE 480 Query: 471 KEKTQQLADVKTICEQEARIKTLE---AQRAQLQAGQPCPLCGSTSHPAVE------AYQ 521 + Q L + + R E R LQ G P Sbjct: 481 QRLRQALETQEAELQAWQRHHPAEHVTQARTTLQQGDDDRQQLIALQPLALQEMARIQAL 540 Query: 522 ALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQW 581 G Q L LE ++ + + A R L + +Q+ + + Sbjct: 541 QARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRLISLETERASLREGEP 600 Query: 582 QAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQ 641 + + + L D+Q +R + + + G ++ Q Q+E Sbjct: 601 CPLCGACDHPLAASYQPPALSDSQRRRDRLSQEVERLGREGGALSERAAQAAAQCAQLES 660 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQE------AQSWQQRQNELTALQNRIQQLT 695 Q L TLT Q + + E Q QR+ EL +LQ + + L Sbjct: 661 EAQQLQQTLTQQRARWQQICDALGLALALEDETALADYLQRCAQRRRELDSLQAQGEALA 720 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 L+ + + + + +++ ++Q Q Q Q Sbjct: 721 QRLQRARDALTQASGRLSQEQHAQSLLLQTLQTQETRRAECERQWQQTEQEQQSLTQQIA 780 Query: 756 TALQASVF-----DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQH 810 L + +LAA DE Q Q + + + + + Sbjct: 781 DDLADGELTAPDAAQSERWLAARRDEWQRWQQAQAQHQQLQTQALSLEQQLRLLQQQLTT 840 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 Q + T+++ L + L + + L Q+ Q+Q + + Sbjct: 841 QTQHHETLTRERQTLDEQLALLLAQRRALLDGRPIADVQAELLHQEQALEQRQSAALAES 900 Query: 871 AQMTQQVEDWG 881 + QQ E Sbjct: 901 QRWQQQYERLE 911 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 310/943 (32%), Positives = 439/943 (46%), Gaps = 88/943 (9%) Query: 191 EQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLT 250 E R + L + +Q Q QQ +Q Sbjct: 287 EPALRLRPYYQSLTQAEEDLRQADAQQHQLEARLQAAAAQRAPLQQALQQAQQAWQQLRQ 346 Query: 251 RQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIR 310 R+DE Q + R L AL+++E+A+ +L+ + R L+ + + SA R Sbjct: 347 RRDETQALIAERVLPLDNALSKQEEAEQRLSQ-QWQESQRQLQDLQAQQQQLSAQQEAQR 405 Query: 311 QQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRA 370 QQ + +L + Q ++ S + +R R R Sbjct: 406 QQHAALQRQLDAARQHAQWGERLPRWQMLLERRGVLSDDGLRLSAERTRLQQEIQHLCRQ 465 Query: 371 QFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVA 430 + ++Q + + Q+ E + L A A+ V A + RQ L+A Sbjct: 466 RDARQETLLGLQQDEQRLRQALETQEAELQAWQRHHPAEHVTQARTTLQQGDDDRQQLIA 525 Query: 431 LHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI 490 L + + R+ LQ + +E+ L E R++Y +K Q L D++ + R+ Sbjct: 526 LQPLALQEMARIQALQARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRL 585 Query: 491 KTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLR 550 +LE +RA L+ G+PCPLCG+ HP +YQ +Q R L EV++LG EG L Sbjct: 586 ISLETERASLREGEPCPLCGACDHPLAASYQPPALSDSQRRRDRLSQEVERLGREGGALS 645 Query: 551 GQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV------------TASLNITLQPLDDI 598 + Q + E+EAQ L+Q +WQ + +L LQ Sbjct: 646 ERAAQAAAQCAQLESEAQQLQQTLTQQRARWQQICDALGLALALEDETALADYLQRCAQR 705 Query: 599 QPWLDAQDEHERQLRLLSQRH-----ELQGQIAAHNQQIIQYQQQIEQRQ---------- 643 + LD+ L QR + G+++ Q ++ ++ Sbjct: 706 RRELDSLQAQGEALAQRLQRARDALTQASGRLSQEQHAQSLLLQTLQTQETRRAECERQW 765 Query: 644 -----------QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN---------- 682 Q + L LT P + E WLA R+ E Q WQQ Q Sbjct: 766 QQTEQEQQSLTQQIADDLADGELTAPDAAQSERWLAARRDEWQRWQQAQAQHQQLQTQAL 825 Query: 683 ------------------ELTALQNRIQQLTPI--------------------LETLPQS 704 L Q L L Sbjct: 826 SLEQQLRLLQQQLTTQTQHHETLTRERQTLDEQLALLLAQRRALLDGRPIADVQAELLHQ 885 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFD 764 ++ ++ L ++ +Q L + +QQ Q L + ++ +AL S F Sbjct: 886 EQALEQRQSAALAESQRWQQQYERLEGELSAARQQQQTLTQRLLPLRQRWQSALADSPFS 945 Query: 765 DQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVT 824 D A LAA++ E+ QL L+ + + QR+Q+ L+ Q + +AQ + RP + Sbjct: 946 DDAALLAAMLTEEEQRQLTALRDDAQRQRQQSAALLAQAQQAVAQGEATRPQELHIDDDD 1005 Query: 825 VEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLN 884 ++Q + Q+LR+++ QGE++QQL D R QQ + +IAQ + +DW YLN Sbjct: 1006 P-WLEQRCSALTQQLRQHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQRERAYQDWSYLN 1064 Query: 885 SLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADA 944 LIGS GDKFRKFAQGLTLD+LV+LAN+QL RLHGRY L R+ + LE+EVVDTWQADA Sbjct: 1065 QLIGSSSGDKFRKFAQGLTLDHLVYLANRQLMRLHGRYQLLRREGDTLELEVVDTWQADA 1124 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDAL 1004 RDTRTLSGGESFLVSL+LALALSDLVSHKTRIDSLFLDEGFGTLD+ETLDTALDALD L Sbjct: 1125 RRDTRTLSGGESFLVSLSLALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTL 1184 Query: 1005 NASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAV 1047 NASGKTIGVISHVEAMKERIP+QI+VKKINGLG+S+L+S + V Sbjct: 1185 NASGKTIGVISHVEAMKERIPLQIRVKKINGLGFSRLDSRYRV 1227 >UniRef50_A1AS54 SMC domain protein n=2 Tax=Desulfuromonadales RepID=A1AS54_PELPD Length = 1230 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 213/946 (22%), Positives = 364/946 (38%), Gaps = 44/946 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL L +NLNSL G+W +D T + S+G+FAITGPTGAGKTT+LDAICLALY +TPR Sbjct: 1 MKILRLSFRNLNSLAGDWDLDLTHPAYVSSGIFAITGPTGAGKTTILDAICLALYGQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L ++Q +N++M+R + +C AEVEFE +R WSQ+R+R +PDG LQ PR E+A Sbjct: 61 LGRITQGENEIMSRQSGDCSAEVEFETGHGRFRCHWSQHRSRRRPDGQLQQPRHEIAEAE 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 GKIL ++K +TG+D+ RFTRSMLL+QG FAAFL A+P ERA +LE++TGT Sbjct: 121 SGKILESRLKGVATRVEEVTGMDFDRFTRSMLLAQGGFAAFLQARPDERAPILEQITGTA 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ R L +++A+ G+ LL+PE+ Q L + E L + Sbjct: 181 IYSRISIKVHERTTEERNRLTEMRAELEGIRLLSPEEEQELLLAKTERKQRESTLNSEAG 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++L W R LQQE + Q E A PQL L+LA A L + Sbjct: 241 AIRETLAWQERIALLQQELLQLDNEQQAFQERREAAAPQLEKLALAGRALKLGGDHAHLL 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + ++ RL + + A Q +Q+ + R+ Sbjct: 301 LLRSQQQEEQTELRTAMERLPRLQSQWQEAFEGLERADAGCAQARQTQEREAELIRLTRE 360 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + G +AQ T++ E R+ A + + + A QHA+ Sbjct: 361 LDLRIGGLQAQLRDLTAETEATRRQASGYRLAMEGYHRRMTESGEELRHVAAFLEEQHAD 420 Query: 421 --QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 + + ++ +++ A + + +++ + Sbjct: 421 AGLVEALTGIEQQLKGLGTTVRQHDEIRAAREQQAAVLEDATRSFARTEEQWHKAHTAAT 480 Query: 479 DVKTICEQEARIKTLEAQRAQLQA--GQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALE 536 + + + + +L A + L G + N RL L Sbjct: 481 EAEERLATIRGQRQALLKGRELSAWRDETQFLAGRLTRLESIGQLLERIEENGHRLTELR 540 Query: 537 NEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNI------ 590 +L + L + ++ + Q E + L+ L + + Sbjct: 541 GRQHELEQRQQALILRERSLAGECQLRERIVRELQDKLLLLNRVRSLEEDRKQLVDGVAC 600 Query: 591 -------TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 + A+ E E L + EL ++ + + Q+ Q + Sbjct: 601 PLCGATRHPYAAGTVPQPDQARQELETALEESGKAGELLSRVRQEQVAVQKDLQRAGQDR 660 Query: 644 QLLLTTLTG-------------YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNR 690 L L Q + ++W +E ++ ++R E A+ Sbjct: 661 GELEARLLDDRTIRDNASHELGIGPEADQAADGQAWTLLIDRETRACRERLAERLAVIRE 720 Query: 691 IQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA 750 ++ + E E + + +++ L+QQ + Sbjct: 721 GERQEGDERGAGELVERLKGELAARDQARLSARLGRESAQTERMRLEQQVAALGAERDRV 780 Query: 751 QAQFDTALQ-------------ASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQ 797 + L + A + + LE+ + + + + Sbjct: 781 LEEMGRVLAPFGIPEIAPTGGDELLAALTGRRDAYVRHLRARDLLERGRTECAAEGEKQR 840 Query: 798 TLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA 857 L+ +T L +Q + VEQ + + E + +RQ K+ Sbjct: 841 ALLAETERALCDREQQLREMTAHRGALVEQRLERYGERDPDKEEKRLA-DALRQADKRRE 899 Query: 858 DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLT 903 ++Q L ++ + QQ+E G + + F L Sbjct: 900 QALREQSRLQDELGGLKQQIERMTSSRDRRGEEISRREAAFLAQLQ 945 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 199/895 (22%), Positives = 338/895 (37%), Gaps = 43/895 (4%) Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSL---TASLQVLTDEEKQLITAQ 239 + A + + + LQAQ +T T + +++ + Sbjct: 348 QEREAELIRLTRELDLRIGGLQAQLRDLTAETEATRRQASGYRLAMEGYHRRMTESGEEL 407 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 + L L + + +Q L+ + + Q A L Sbjct: 408 RHVAAFLEEQHADAGLVEALTGIEQQLKGLGTTVRQHDEI--RAAREQQAAVLEDATRSF 465 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 A E RL + R ++ ++ + + + Q L L + Sbjct: 466 ARTEEQWHKAHTAATEAEERLATIRGQRQALL--KGRELSAWRDETQFLAGRLTRLESIG 523 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 Q + ++ + L Q QQ L E+ L + + + L + Sbjct: 524 QLLERIEENGHRLTELRGRQHELEQRQQALILRERSLAGECQLRERIVRELQDKLLLLNR 583 Query: 420 --EQRPLRQHL------------------------VALHGQIVPQQKRLAQLQVAIQNVT 453 R+ L ++ + + + V Sbjct: 584 VRSLEEDRKQLVDGVACPLCGATRHPYAAGTVPQPDQARQELETALEESGKAGELLSRVR 643 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTS 513 QEQ L Q E +L D +TI + + + + Q GQ L Sbjct: 644 QEQVAVQKDLQRAGQDRGELEARLLDDRTIRDNASHELGIGPEADQAADGQAWTLLIDRE 703 Query: 514 HPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQD 573 A A V + E + + GE L+G+L A + +S + + Sbjct: 704 TRACRERLAERLAVIREGERQ-EGDERGAGELVERLKGELAARDQARLSARLGRESAQTE 762 Query: 574 EQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQII 633 L QQ A+ A + + L+++ L E + + + Sbjct: 763 RMRLEQQVAALGAERD---RVLEEMGRVLAPFGIPEIAPTGGDELLAALTGRRDAYVRHL 819 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 + + +E+ + L + + + +E + + E + + Sbjct: 820 RARDLLERGRTECAAEGEKQRALLAETERALCDREQQLREMTAHRGALVEQRLERYGERD 879 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 + L + L ++ ++ L Q + + + + + +A Sbjct: 880 PDKEEKRLADALRQADKRREQALREQSRLQDELGGLKQQIERMTSSRDRRGEEISRREAA 939 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 F LQ S F D+ A+L A + ++ +L + L T + ETL + + Sbjct: 940 FLAQLQESGFSDETAYLHACLPQERFDELTRWADELARDETSITTRLRDRQETLRRETER 999 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 ++EQI +E A +L E G I QQL+Q A+ Q+ Q+ +Q+I Q Sbjct: 1000 NL-----TAKSLEQIHEEHAALASQLGELQKELGAIDQQLRQHAEQLQRHQSRLQEIRQQ 1054 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 + + W L SLIGS +G KFR FAQGLT + +V AN+QL+++ RY+L R +E LE Sbjct: 1055 GHECQRWELLRSLIGSSDGKKFRNFAQGLTFELMVAHANRQLSKMSDRYILVRDTAEPLE 1114 Query: 934 VEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSET 993 + V+D +QA +R T+ LSGGESF+VSLAL+L LS + S R+DSLFLDEGFGTLD + Sbjct: 1115 LNVIDNYQAGEIRSTKNLSGGESFIVSLALSLGLSRMASRNVRVDSLFLDEGFGTLDEDA 1174 Query: 994 LDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 L+TAL+ L L GK IG+ISHV A+KERI +I+V+ G S L + Sbjct: 1175 LETALETLAGLQQEGKLIGIISHVPALKERIGARIQVE-AGNGGRSTLSGPGCRR 1228 >UniRef50_B6QZR1 Exonuclease SbcC n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR1_9RHOB Length = 1249 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 172/901 (19%), Positives = 326/901 (36%), Gaps = 39/901 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R +NL SL ++ID +EP GLFAITG TGAGK+TLLDA+CLAL+ + PR Sbjct: 1 MRILAVRGENLASLAAPFEIDLEQEPLDGAGLFAITGETGAGKSTLLDALCLALFGQCPR 60 Query: 61 LSNVSQSQ---------------NDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQ 104 LS S ++TR A AE +F G YRA W+ RARN+ Sbjct: 61 LSAAGSSDSVPDVAGADLKETNPRTVLTRGAASGFAEADFIGADGTGYRARWTVRRARNK 120 Query: 105 PDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNA 164 G LQ L R D + +K GL Y +F R++LL+QG F AFL A Sbjct: 121 ASGRLQNVERSLVRIEDNAAVESGIKQVDAAVEERLGLTYDQFKRTVLLAQGDFDAFLKA 180 Query: 165 KPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTAS 224 ERA LLE++TGT+ Y IS +F++ A+ + KL+ ++ LL E+ +L Sbjct: 181 NDNERAALLEKVTGTQRYRDISKQIFQRFSEAKDAVGKLEEKSDVAGLLEDEERTALVGE 240 Query: 225 LQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALS 284 L + + + +SL L + DE + + + A E AQ + + Sbjct: 241 QSELEKQSASVQSDMDAIAKSLGHLQKLDEAKTKLASAHDEFVALKARHENAQAKRDLKA 300 Query: 285 LAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQ 344 + ++L P +R+ + +A R E+ L++ A+ A + A + Sbjct: 301 QFERIKSLEPVNQRVVDAERDVAGTRAAAEKSQVMLEAVRTDLAAKDEQAKQADALFNEL 360 Query: 345 QQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL 404 + L E Q + + + Q + +Q A Sbjct: 361 EAELTKLTPEWSAAEQLDTKLGELETEGKQLRERSDAANLDAKQAEDALAAHTKSLEEQK 420 Query: 405 TLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALN 464 L A + + + + L + + ++Q+A+ + + N Sbjct: 421 ALQA-----TVKEQMARLSATKVLKERRDSLFADLEEYDRVQIALSKDAERLVEMRKREN 475 Query: 465 EMRQRYKEKTQQLADVKTICEQ-EARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL 523 E+ + + + +LA + + E+ + + + + + L A S + +A Sbjct: 476 ELSEIQSKLSAELAQFASDLDGCESDVASKKGEISALGANDA---RKSMEQLSAFRQRAE 532 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 + + + + L Q++ + + ++ E + + Sbjct: 533 KLQETSRNFVKAKRNKQAESATWQKLVNQMEGLQEAKEKATQELTFREEALEKARGLSTL 592 Query: 584 VTASLNITLQPLDDIQPWLD------AQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQ 637 A+ ++ L + D + L G + ++ + + Sbjct: 593 AEAAQGDQVKLLRAGLVEDAPCPVCGSDDHPVDTQEGRAALDALFGDVFLQRKEAEEART 652 Query: 638 QIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPI 697 ++ + L + E+ ++ QRQ + Sbjct: 653 AAQRSLSDIERELAACEASKKNAFEQAERFEAETSALEADAQRQWSSLEAPFDLSFALDA 712 Query: 698 LETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTA 757 L P + + T + R V Q AL + + L + + KA Sbjct: 713 LLDAPDLLDAVLAQVTSKADALRAVLAQDDALRKELEQLDAKLCELRDAHTKAAGD---- 768 Query: 758 LQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQ--TAETLAQHQQHRP 815 + ++ + + + E + L ++R ++TL+ +L Sbjct: 769 --QAGKAEEVSSIKVELSGVEGRHNENSEARLRLEQRLSETLLAGGMVFGSLGDELPALK 826 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 T EQ++Q+ T L+ + ++ Q ++++ + Q Sbjct: 827 ASLQDRISTWEQLEQQEGTTSAALQSLEQKTSGLSERHGGLTKTAADLQGQLEKLRALHQ 886 Query: 876 Q 876 + Sbjct: 887 E 887 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 181/881 (20%), Positives = 324/881 (36%), Gaps = 41/881 (4%) Query: 195 SARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDE 254 SA +L+ + E+ + + D + ++++ + Q Sbjct: 372 SAAEQLDTKLGELETEGKQLRERSDAANLDAKQAEDALAAHTKSLEEQKALQATVKEQMA 431 Query: 255 LQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIE 314 ++ A+ E+ ++L++ A L +R E S + + ++ Sbjct: 432 RLSATKVLKERRDSLFADLEEY--DRVQIALSKDAERLVEMRKRENELSEIQSKLSAELA 489 Query: 315 EVNTRLQSTMALRASIRHH-----AAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWR 369 + + L + AS + A ++Q + + R + + Sbjct: 490 QFASDLDGCESDVASKKGEISALGANDARKSMEQLSAFRQRAEKLQETSRNFVKAKRNKQ 549 Query: 370 AQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLV 429 A+ + + Q+ A Q+L AQ + + LR LV Sbjct: 550 AESATWQKLVNQMEGLQEAKEKATQELTFREEALEKARGLSTLAEAAQGDQVKLLRAGLV 609 Query: 430 ALH--------GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVK 481 V Q+ A L +V ++ + A ++ + ++LA + Sbjct: 610 EDAPCPVCGSDDHPVDTQEGRAALDALFGDVFLQRKEAEEARTAAQRSLSDIERELAACE 669 Query: 482 TICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKK 541 + S P ++ L A+ +V Sbjct: 670 ASKKNAFEQAERFEAETSALEADAQRQWSSLEAPFDLSFALDALLDAPDLLDAVLAQVTS 729 Query: 542 LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPW 601 + + Q DA+ K+L++ + + LR ++ L ++ Sbjct: 730 KADALRAVLAQDDALRKELEQLDAKLCELRDAHTKAAGDQAGKAEEVSSIKVELSGVEGR 789 Query: 602 LDAQDEHERQLRLLSQRHELQG---------QIAAHNQQIIQYQQQIEQRQQLLLTTLTG 652 + E +L L G ++ A + EQ +Q TT Sbjct: 790 HNENSEARLRLEQRLSETLLAGGMVFGSLGDELPALKASLQDRISTWEQLEQQEGTTSAA 849 Query: 653 YALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL----------ETLP 702 + + A Q + +L AL +L Sbjct: 850 LQSLEQKTSGLSERHGGLTKTAADLQGQLEKLRALHQERFAERKLLLGGMATGAHRAAFT 909 Query: 703 QSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASV 762 + + + + + + A +L + + L Sbjct: 910 EKHSNAKERIKNASNAHSNAKAEFGRVEAGLAAAKDAEAKAGAALTDCVERLNAELAGLG 969 Query: 763 FDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALT 822 L L + L++ AQT V+ + LA Q D Sbjct: 970 LTKDAYDGLRERSSHELEALLAELKALDDAHVAAQTAVSTWEKELAAVQAQPLPDKAQP- 1028 Query: 823 VTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGY 882 ++ +L T Q E +G + ++L+ DA+ R++ Q +M + + + + WG Sbjct: 1029 ----ELSSQLEATKQAFSELQVKRGVLSEKLRVDAEAREKAQQIMGLLLEAKETAKTWGA 1084 Query: 883 LNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQA 942 ++ IGS +G KF+K AQG+TLD LV LAN+QL +L RY L+R A L + V+D Sbjct: 1085 ISEAIGSADGSKFQKVAQGVTLDLLVELANKQLHQLKPRYQLKR-ADFGLGLFVIDRDMG 1143 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 D R TR+LSGGE FL+SL+LALALS L ++ +D+LF+DEGFG+LD+E+LD A+DAL+ Sbjct: 1144 DTPRSTRSLSGGERFLISLSLALALSGLEGRQSFVDTLFIDEGFGSLDAESLDLAIDALE 1203 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLES 1043 L G+ +GVISHVEA+K+RIPVQ++V + G G S++ Sbjct: 1204 MLQGQGRKVGVISHVEALKDRIPVQVQVVR-QGAGRSRVAV 1243 >UniRef50_A6UPY6 SMC domain protein n=1 Tax=Methanococcus vannielii SB RepID=A6UPY6_METVS Length = 1019 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 147/1060 (13%), Positives = 385/1060 (36%), Gaps = 59/1060 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I S++++N S + + + G+ I G G+GK+++ A+ AL+ Sbjct: 1 MIIKSIKIENFKSHRNT-------KLQLNKGITTIIGHNGSGKSSIFQAMNFALF----S 49 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +++M + + E+EFE++G +Y + + + E Sbjct: 50 PRGANFKIDNMMQKGSKSFSIELEFEIRGNSYLVKRKRYQN-----------KTEDKLYI 98 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +G + + + + + LD F+ ++ + QG+ A + +R E++ +L G E Sbjct: 99 NGILNVESSSEVNKKIEEILELDNSIFSNAVYIKQGEIANLIQMTSGDRKEVIGKLLGIE 158 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y ++ + K+ L ++ + +T ++ L + L +K++ Sbjct: 159 RYEKVYEKINIIKKAYEERLFEINGELKQEIEVTN-LLEKLNLEILRLETLKKEINNEII 217 Query: 241 QEQ----QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH- 295 + + N LT ++ + ++ ++ LQ+ ++E + +L L + + + Sbjct: 218 NLENIKVEKNNELTEFNQKFIKITKLREDLQENISEIKNISLELQNLENSLKSVDYESLK 277 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE- 354 E E+ + +I+E++ +++S + + K+ + + + + Sbjct: 278 LENNQENYFKYLKVESRIKELSEKIKSHKLEYDAFQKLKLKEESLSMEILEIGKKINEYS 337 Query: 355 -HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADE-VA 412 + F+ N + + + ++ L +++ L I ++ E V Sbjct: 338 FQESFKDLNLNEVQILKNINNKDLKSHSIEDLKKYLVILNEEILKLDFIKEKISELEFVE 397 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQ------EQTQRNAALNEM 466 + + Q+ L++ +++++L + E +R N Sbjct: 398 KQILEINNQKKLKKEFEIDSKNYDIAVEKISELNLKKNQYANSLKEKIELEKRLNIENNE 457 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 + + + ++ D++ E K Q + + + G+ E Sbjct: 458 KMQLNKSLKEFMDIELKINLEKNTKDKYDQICEKISKLTEVIAGNEIVLKNSLVSKAELE 517 Query: 527 VNQSRLLALENEV--KKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 ++++ K E + + + K ++ +N+ + L + ++ L + + + Sbjct: 518 KTVDECNICKSKITNDKKQELLLAYELEQENLEKVIESLKNQVEILNRKKEILNSELKII 577 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 + L+ L ++ L+ + + ++ Y+ Q + ++ Sbjct: 578 NGLKPKYGELLEKKNSILKVENSINELELKLTDMKKNLCEYEVIKSELSNYELQKSRLKE 637 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQN-ELTALQNRIQQLTPILETLPQ 703 + ++ + L T+ + + ++ ++ ++ L L+ + Q Sbjct: 638 INNKYQYCIQFLNNIDEN--NVLTTQSELLKVIGDYDVLKIQLMKKDLETLKDNLKEILQ 695 Query: 704 SDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVF 763 + E + ++ + L Q + + L + ++ +++ Sbjct: 696 NLEREKVLNFELTNVKNNIYSKL-GLVEQYLEWETEKSNLEVELSMHKKYYEEFMESMAV 754 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTV 823 + ++ + L + + + TL + + + + + L + Sbjct: 755 LKSHSKAYSIEITKLNDYLREKTFEKYSVLTKKNTLRNKLINDIQEI-NYNEERHKELNI 813 Query: 824 TVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYL 883 E I +EL + +K ++ ++ + ++ ++ ++ E + Sbjct: 814 YFENILKELHEFSKKFERISSELTVKKENSESLNKKIKELALKKEEKQKIESFKEYLEKI 873 Query: 884 NSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYL-LQRKASEALEVEVVDTWQA 942 + SK+G F+K+ + + + ANQ Y +Q K +L +VD Sbjct: 874 RREVFSKDG--FQKYLREKYIPLIQRHANQIFQEFELPYSHIQLKEDYSL---IVDGL-- 926 Query: 943 DAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALD 1002 TLSGGE VSLAL L +S V + I+ + LDE LD E L+ Sbjct: 927 ----PVETLSGGEQIAVSLALRLGISKAVCNN--IECIILDEPTAYLDEERRKNLLNIFR 980 Query: 1003 ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 + + +I+H + +++ + V+KI + LE Sbjct: 981 NIKTISQM-AIITHHQELEQIADNILTVRKIGEISKVTLE 1019 >UniRef50_D0ICU8 Exonuclease SbcC n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICU8_VIBHO Length = 1255 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 187/933 (20%), Positives = 350/933 (37%), Gaps = 61/933 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKIL+LR +NL S++ ++IDF GLFAITG TGAGK+TLLDAICLALY PR Sbjct: 1 MKILALRGENLASIQHPFEIDFVNSRLGEAGLFAITGKTGAGKSTLLDAICLALYDRMPR 60 Query: 61 LSNVSQSQ-----------------NDLMTRDTAECLAEVEFEVKGEA-YRAFWSQNRAR 102 L ++ +++R AE AEV+F+ + +RA W RAR Sbjct: 61 LQANKKNDAEIGLGDEAARLKANDVRSILSRGKAEGYAEVDFKANDGSCWRAHWHVRRAR 120 Query: 103 NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFL 162 + DG +Q L +G+ + K ++ L L GL Y +F R+++L QG FAAFL Sbjct: 121 GKADGRVQASEQWLENLENGQRFSGKKQEVLGEIERLVGLSYEQFRRAVMLPQGDFAAFL 180 Query: 163 NAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT 222 A ERA LLE +TG EIY ++S +E+ K+ + LE L+ + G+ +L E+ L Sbjct: 181 KASTDERAALLERMTGGEIYSRLSVAAYEKSKAEKNALETLREKLGGICILPEEEKTELR 240 Query: 223 ASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA 282 L+ + ++ + L EL+ + ++A ++A P+ Sbjct: 241 EKLEAEKASLEGVLAQLDTLKNYRQTLASHAELENALAAAIAQSEEAEKALKEATPRRDE 300 Query: 283 LSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQ 342 LS+ + + + ++ +L ++ IE LQ+ + L Sbjct: 301 LSMVEKVQPAHADFTQLQHTRLSLTQLKNNIESRTAALQTLTGEIITATDALTASQNILS 360 Query: 343 QQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQT-SDREHLRQWQQQLTHAEQKLNALAA 401 Q + R + + E + Q +E + + EQK A Sbjct: 361 TAQAQWVEAEPKLRRASEMDTEHRAIKQQLDDMQGQLQERDGKINKARAEFEQKRRAHYQ 420 Query: 402 ITLTLTADEVATAL--------AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVT 453 + + A + A Q+ + + + Q + + +LQ Q V Sbjct: 421 LEEQIAALKHELAQFGDFSGIAEQYQPVLDNLEQYLVANRQYAEAEAEIQKLQHFQQQVE 480 Query: 454 QEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLE--AQRAQLQAGQPCPLCGS 511 ++ + + + + +QLAD T ++A+ + Q Q S Sbjct: 481 RDLAGISHQQEILAKERGQLEEQLADADTDTLEKAQKEDYARYEQLQQRHEHFRKLQYAS 540 Query: 512 TSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLR 571 + ++A S +E+ K+L + T ++ + + + Sbjct: 541 NEWLNLLEHKARLIQEKNSLTSVIESATKQLSDIEPTFNTRVAQYEEAERALNQSMAVVS 600 Query: 572 QDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAH--- 628 E + P + P ++ +RQ Q Q + H Sbjct: 601 LAEYRSQLEEGQPCPLCGSGHHPYREHNPVVEGVLGSQRQRLQTLQSELRQLESERHYFH 660 Query: 629 -------------NQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWL------AT 669 QQ + +++++ LL L + ++ + Sbjct: 661 QQRQQAQQQMPHWEQQWQELDYHVQRQKALLAPLLEEAGEVTEYLEHDDPNAFGSWVDES 720 Query: 670 RQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLAL 729 Q+ +++Q+ ++ L+NR Q+L ++ Q E + + QV +Q Sbjct: 721 HQKAKENYQEMESLYHTLENRRQRL-GYVQRWQQQLMQLGQRENQLQTHAHQVAQQKTQS 779 Query: 730 HSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQ-------L 782 + + LQ++ V A +S++ D S + + A + + Q L Sbjct: 780 DERIKALQERLVAAKESIRSRHNALDDLYGDSSWLNMLQHYGAERYIREMQQRIKHYLSL 839 Query: 783 EQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKL--R 840 + Q E Q + + L Q H+ + A + E+ Q + L Sbjct: 840 REKLQECEKQLTPLVPDMAALEQALKTLQLHQNEAIDAYHILAEKAQLQYKARRAVLDVD 899 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + + ++ L+ ++ + ++ + + Sbjct: 900 DLAGYEASLKSALETARSREKECEAVLSSLTEK 932 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 182/886 (20%), Positives = 334/886 (37%), Gaps = 30/886 (3%) Query: 184 QISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQ 243 + ++ + +H++ + +L+ +Q Q + + + ++ I A + E Sbjct: 374 RRASEMDTEHRAIKQQLDDMQGQLQERDGKINKARAEFE-QKRRAHYQLEEQIAALKHEL 432 Query: 244 QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPA--RNLRPHWERIAE 301 + E Q + A + +A+ ++ L Q R+L + Sbjct: 433 AQFGDFSGIAEQYQPVLDNLEQYLVANRQYAEAEAEIQKLQHFQQQVERDLAGISHQQEI 492 Query: 302 HSAALAHIRQQIEEVNTR-LQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + + +Q+ + +T L+ + ++ ++ Q + N WL + + Sbjct: 493 LAKERGQLEEQLADADTDTLEKAQKEDYARYEQLQQRHEHFRKLQYASNEWLNLLEHKAR 552 Query: 361 WNNEPAGWRAQFSQQTSDREHLR-QWQQQLTHAEQKLNALAAITLTLTADEVATALAQHA 419 E + T + + ++ E+ AL ++ E + L + Sbjct: 553 LIQEKNSLTSVIESATKQLSDIEPTFNTRVAQYEEAERALNQSMAVVSLAEYRSQLEEGQ 612 Query: 420 -------EQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 P R+H + G + Q++RL LQ ++ + E+ + + +Q+ Sbjct: 613 PCPLCGSGHHPYREHNPVVEGVLGSQRQRLQTLQSELRQLESERHYFHQQRQQAQQQMPH 672 Query: 473 KTQQLADV-----KTICEQEARIKTLEAQRAQLQAGQPCP----LCGSTSHPAVEAYQAL 523 QQ ++ + ++ L+ P + S + Sbjct: 673 WEQQWQELDYHVQRQKALLAPLLEEAGEVTEYLEHDDPNAFGSWVDESHQKAKENYQEME 732 Query: 524 EPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQA 583 V++ ++ L + + + + + + +AL ++ A Sbjct: 733 SLYHTLENRRQRLGYVQRWQQQLMQLGQRENQLQTHAHQVAQQKTQSDERIKALQERLVA 792 Query: 584 VTASLNITLQPLDDI---QPWLDAQDEH--ERQLRLLSQRHELQGQIAAHNQQIIQYQQQ 638 S+ LDD+ WL+ + ER +R + QR + + Q+ + Sbjct: 793 AKESIRSRHNALDDLYGDSSWLNMLQHYGAERYIREMQQRIKHYLSLREKLQECEKQLTP 852 Query: 639 IEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPIL 698 + L L L + + LA + Q ++ ++ L L L Sbjct: 853 LVPDMAALEQALKTLQLHQNEAIDAYHILAEKAQLQYKARRAVLDVDDLAGYEASLKSAL 912 Query: 699 ETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTAL 758 ET ++ + + E A +Q++ +Q K Q F+ Sbjct: 913 ETARSREKECEAVLSSLTEKRAADRAALEAAEAQRKDTDKQHREVVHRWLKWQQTFNLTE 972 Query: 759 QASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDG 818 A + + + L L+ Q R + + + ++ E + Q + G Sbjct: 973 SALIQLLAKDANWVTSERAALKALDDAMQVASTLRNEREGRLRESQEAVDQALTWLTERG 1032 Query: 819 LALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVE 878 ++ L ++ E S +R+ L+ Q L Q+ + Q E Sbjct: 1033 ADDDEKATALKNALDVQKAEIEE---SVFSVRRTLEASEQAEAQAGELRSQLEKQQQHAE 1089 Query: 879 DWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVD 938 W + LIGS G+KFR AQ LTL LV AN L L RY LQ S L ++VVD Sbjct: 1090 MWMKIADLIGSASGNKFRNLAQSLTLQQLVLEANVHLQELAPRYALQTVPSSPLSLQVVD 1149 Query: 939 TWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTAL 998 D VR +LSGGESFLVSLALALAL+ L + ++ SLF+DEGFGTLD ++L+ AL Sbjct: 1150 HDMGDEVRSVESLSGGESFLVSLALALALASLAADTRQLGSLFIDEGFGTLDPDSLEMAL 1209 Query: 999 DALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 LD L A G+ IGVISHV + ERI Q+ V+ G G S+++ Sbjct: 1210 ACLDTLQADGRQIGVISHVGTLVERIGTQVTVE-ALGGGVSRVQVR 1254 >UniRef50_A8SR38 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR38_9FIRM Length = 923 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 106/749 (14%), Positives = 243/749 (32%), Gaps = 47/749 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ L+L + G ++D T+ + GL+ +TG TGAGKTT+ DAIC ALY E Sbjct: 1 MRPLNLTMSAFGPYAGVQELDMTQ--LGAEGLYLVTGDTGAGKTTIFDAICYALYDEPSG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELAR-- 118 ++ + E+ FE G+ YR + + R + G + Sbjct: 59 AGRDARMMRSTYADVDTDTYVELTFEHIGKIYRVKRNPSYERRKKKGEGTTLQEAAVELY 118 Query: 119 CADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D ++ ++ K L G+D +F++ +L+QG+F L A+ +R ++ +L Sbjct: 119 LPDDSVIVNRTKA-NSYLQELMGVDREQFSQISMLAQGEFKELLVAESSDRQKIFSKLFH 177 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 T Y + + ++ + ++E + ++ V L + + K Sbjct: 178 TSRYFFLQKRLQDETRKLQSERDDMKKSIEQY---ISGIVCGEDDPLGLSVQKAKAGQMP 234 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + + L ++++ + +Q + + + L ++ Sbjct: 235 VDEVLALIEKLIGMEKVRTASYEKQIGVLE---------------TRIGGLDTLIGKAQQ 279 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 + L ++ V + A + + + ELQ+Q +N L ++++ Sbjct: 280 TEKARVQLGKAHSELANVQNDRTTAEAELNRTKDALPE-TKELQRQAAVINNELPDYEKL 338 Query: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQH 418 A + +Q E R KL + + + Sbjct: 339 DAKRRNIADGEQRLQRQNQQAEKGRTLVADKQKLIGKLK-----MEQVQLADAGEKIVAF 393 Query: 419 AEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLA 478 R + I ++ + A+ ++ N + Y+ + Sbjct: 394 TASREKMADAIDYLNGINRLLMEYSRRKQAVDKAQKQYLLDNEMYTRKQDMYEHMSTLYR 453 Query: 479 DVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENE 538 + L+ GQ CP+CG+T H + + P ++L + + Sbjct: 454 N-----------AQAGILAKDLKEGQACPVCGATEHKILASLPKEAP--TDAQLEDAKKD 500 Query: 539 VKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDI 598 + + + + + + + + ++ Sbjct: 501 TDRARDRANASATDAKVKLASVTEIRTSIIEQAGRKFDAPEDIDGLPEKVEKNIGYYNEK 560 Query: 599 QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLP 658 D Q E ER + +S+R EL ++ + + Q ++ ++ + A Sbjct: 561 IADTDRQIEAER--KRVSRRDELAAKLPQEEETLAGMQTKLADIEKNISALTAKLASDRE 618 Query: 659 QEDEEESWLATRQQEAQSWQ--QRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVL 716 Q E + L R + + + LQ+ + + Q+ + + + Sbjct: 619 QVTELAAGLRFRNRSEAEMKMNEILGRAKKLQDSFEASEKRYNAVIQNIKALEGQIKALT 678 Query: 717 ENWRQVHE-QCLALHSQQQTLQQQDVLAA 744 + + + L + + + Sbjct: 679 DTLESAEKLELAKLEEDKVAARNELGRIR 707 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 117/826 (14%), Positives = 271/826 (32%), Gaps = 39/826 (4%) Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + ++ T E E ++ + +L + Q ++ Sbjct: 99 ERRKKKGEGTTLQEAAVELYLPDDSVIVNRTKANSYLQELMGVDREQFSQISMLAQGEFK 158 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWL------QE 354 E A + RQ+I L+ ++ K +E ++S+ ++ ++ Sbjct: 159 ELLVAESSDRQKIFSKLFHTSRYFFLQKRLQDETRKLQSERDDMKKSIEQYISGIVCGED 218 Query: 355 HDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT--LTLTADEVA 412 AG + + + + E+++ L L + Sbjct: 219 DPLGLSVQKAKAGQMPVDEVLALIEKLIGMEKVRTASYEKQIGVLETRIGGLDTLIGKAQ 278 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 + L + + L + + A+ T+E ++ A +N Y++ Sbjct: 279 QTEKARVQLGKAHSELANVQNDRTTAEAELNRTKDALPE-TKELQRQAAVINNELPDYEK 337 Query: 473 KTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRL 532 + ++ ++ R + L A + + A + + Sbjct: 338 LDAKRRNIADGEQRLQRQNQQAEKGRTLVADKQKLIGKLKMEQVQLADAGEKIVAFTASR 397 Query: 533 LALENEVK------KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 + + + +L E + + +D KQ D + + ++ ++ A Sbjct: 398 EKMADAIDYLNGINRLLMEYSRRKQAVDKAQKQYLLDNEMYTRKQDMYEHMSTLYRNAQA 457 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLL 646 I + L + Q + L L + Q+ + + + ++ Sbjct: 458 --GILAKDLKEGQACPVCGATEHKILASLPKEAPTDAQLEDAKKDTDRAR---DRANASA 512 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 A + + ++ + + +++ Sbjct: 513 TDAKVKLASVTEIRTSIIEQAGRKFDAPEDIDGLPEKVEKNIGYYNEKIADTDRQIEAER 572 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQ 766 + Q E + ++ +++ L + Q F ++ Sbjct: 573 KRVSRRDELAAKLPQEEETLAGMQTKLADIEKNISALTAKLASDREQVTELAAGLRFRNR 632 Query: 767 QAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVE 826 + + L + ++L+ + E ++ ++ Q + A + + Sbjct: 633 SEAE--MKMNEILGRAKKLQDSFEASEKRYNAVIQNIKALEGQIKALTDTLESAEKLELA 690 Query: 827 QIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSL 886 +++++ +L + +++ + +++ ++ L Sbjct: 691 KLEEDKVAARNELGRIRLFMQDGNSRIRANETVMANISRKSDELSAKEKEYVSVKSLYDT 750 Query: 887 IGS----KEGDKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQRKASE-------ALEV 934 K + Q D ++ AN + ++ G+Y L R L++ Sbjct: 751 ASGNVSGKNKINLEAYIQMSYFDRIIQRANLRFLKMSDGQYELSRVTDSSDKRSQIGLDL 810 Query: 935 EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLV---SHKTRIDSLFLDEGFGTLDS 991 VVD + + RD ++LSGGESF+ SL+LAL LSD V + +ID++F+DEGFG+LD+ Sbjct: 811 CVVDHYNG-SRRDVKSLSGGESFMASLSLALGLSDEVQASAGGIQIDTMFVDEGFGSLDT 869 Query: 992 E-TLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 E TL A AL ++ K +G+ISHV +KE+I QI V+K Sbjct: 870 EKTLPQAYKALVSVTEGCKLVGIISHVTELKEKIDKQIVVEKDRTG 915 >UniRef50_P62134 DNA double-strand break repair rad50 ATPase n=4 Tax=Methanococcus maripaludis RepID=RAD50_METMP Length = 993 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 147/1051 (13%), Positives = 365/1051 (34%), Gaps = 67/1051 (6%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M I +++++N S + I+F++ G+ +I G G+GK+++ A+ AL+ Sbjct: 1 MIIKNIKMENFRSHRN-TSINFSK------GITSIIGQNGSGKSSIFQAMNFALF----A 49 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + +LM + A E+EFE+ G Y + + + Sbjct: 50 PRGNNFRIENLMQQGAASFSVELEFEMMGNTYLVKRKRFQHKTDDK-----------LYV 98 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 +GK+ A+ + + + +D F+ ++ + QG+ A + P++R E++ +L G E Sbjct: 99 NGKLNAESASEINKKIEEILEIDNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIE 158 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y + S + KS L KL+ + L+ L + ++ ++ Sbjct: 159 KYEKASEKMNIVKKSYEETLLKLEGEL-----------TQEPEILENLEKLKNEVSESEI 207 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 +++ L ++L+ E + +++ AE + + L + +N+ + Sbjct: 208 LKEEILKKYENLEKLKLEKNSEILQMEEKFAENNQLKENLKDI--ISEIKNINLEIQNFK 265 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 +A + I E + + L I+ K + E ++ Sbjct: 266 NSLNLVAEESKNISENEENYKKYLELELKIKELNNKLIGHKSNYESYNKLKTIEESLLKE 325 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 + +E+L++ +++ ++ + + ++ + H + Sbjct: 326 LGVLKESLKDNKKNPDELKENLKENDEKILILDKIKEKIKELE---FIEKQIYEIKIHKK 382 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 V ++ + + L + + +N+ +E+ L + +L D Sbjct: 383 TVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFDLEKKLQNETDEKTKLISELTDF 442 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + I E+ L+ + L + + + + Sbjct: 443 EKIEEKINLENELKEKYEDLSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQS 502 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 K+ EE + L+ ++Q ++ +SL++ + + + + + LN Sbjct: 503 KITEE--KKQELLEKYNSEIQNEQLSTESLKKQLEIILNKKEKMKVKLNEIDSFKLKYGE 560 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYAL----- 655 + ++ + + + E ++ + +I + L Y Sbjct: 561 LKEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNCNYSS 620 Query: 656 TLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVV 715 +++E +L + + ++ + + ++N + L + + L + E + Sbjct: 621 QFLTKNDESEFLTKKLELSKIIGDYDS--SKIENEKKSLENLKDELKNTIYNLEREI-NL 677 Query: 716 LENWRQVHEQCLALHSQQQ---TLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAA 772 + + + + + + + L + + ++ +++ + + Sbjct: 678 KKELKNIQNDISSKIGIVECYVKWETEKSDFENKLSECKENYEKYMESLAVLKNYSKTYS 737 Query: 773 LMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQEL 832 + L Q + + T+ + + + P+ E I E Sbjct: 738 VEINNLNEFLNQKIAEKQQFCEKLLETRTEIEKNIQTV-NYNPELHENAKRLYENILNEF 796 Query: 833 AQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEG 892 + L ++ + + + Q ++ ++ + E + I SK+G Sbjct: 797 NDILRTLERISSELKLKNENISYLNEKIQNLSNKKEEKKKIEEFKEYLDKIKREIFSKDG 856 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLHGRYL-LQRKASEALEVEVVDTWQADAVRDTRTL 951 F+K+ + + + NQ Y +Q K +L V+ + TL Sbjct: 857 --FQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL---------PVETL 905 Query: 952 SGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTI 1011 SGGE VSLAL L +S V + I+ + LDE LD + L+ + + Sbjct: 906 SGGEQIAVSLALRLGISKAVCNN--IECIILDEPTAYLDEDRRKNLLNIFKNIKTINQM- 962 Query: 1012 GVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 +I+H + +++ +KV+KI LE Sbjct: 963 AIITHHQELEQIADNIVKVRKIGENSKVSLE 993 >UniRef50_B6WT34 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WT34_9DELT Length = 1230 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 223/948 (23%), Positives = 396/948 (41%), Gaps = 40/948 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+I ++R +NLNSL G W+ID TR F S G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MRIQNIRFQNLNSLTGVWEIDLTRPDFVSAGIFAITGPTGAGKTTILDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEV-KGEAYRAFWSQNRARNQPDGNLQVPRVELARC 119 L +S S+N++M+R T EC+AEV F++ G YR WSQ RAR P+G LQ R E+A Sbjct: 61 LKTLSDSENEIMSRQTGECMAEVVFQIASGRRYRCHWSQRRARKSPEGRLQAARHEIADA 120 Query: 120 ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGT 179 G+I+ + +D + +TGLD+ RFTRSM+L+QG F+AFL+A RA +LE +TGT Sbjct: 121 DSGQIICAQKRDMARVVTEITGLDFDRFTRSMMLAQGGFSAFLDASADSRAPILESITGT 180 Query: 180 EIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQ 239 E Y +IS +V E+H+ + LE ++ + +G LL ++ Q+L L L D+ +Q Sbjct: 181 EKYSRISMLVHERHRQEKLLLEDMRKELAGKPLLPVDEEQALRQQLSRLEDQSRQSKIRL 240 Query: 240 QQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERI 299 QQ QQ+L WL D + + ++ + ++ + +E+ +PQ L AQ A L + + Sbjct: 241 QQLQQALQWLQGLDTARGQLAQIEAEEEKLVLKEQAFRPQALRLEQAQRAARLEGSYSAL 300 Query: 300 AEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFR 359 + + +Q + T L RH + + +L+Q + + R Sbjct: 301 LQLRHQQNLLTEQRQNHATELPRLQEKLQEARHKQDECARQLEQAKAEQARQTPLLHQVR 360 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEV--ATALAQ 417 + + + + +RQ +Q L + + ++ + + + L + Sbjct: 361 ALDIQLESSEKEVRRV---LLEVRQQEQALASLKARCDSRRQALDDILRQQASVESWLEK 417 Query: 418 HAEQRPLRQHLVALH---GQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 HA L + L + + +++ Q +A++ ++Q+ + NA L E + + Sbjct: 418 HAADAGLVEQLSGIEAGIQRAHDLEQKQQQRDMALRQISQQLEKGNARLAERLRHQEVAA 477 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCP------------LCGSTSHPAVEAYQA 522 +LA V+ +Q K + L Q + S + + Sbjct: 478 AELAQVENRRQQLVEEKEKLLEGRSLLQWQEEYNGIQKKILLLQAVEKSLKDVFLYHAEL 537 Query: 523 LEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDE---NEAQSLRQDEQALTQ 579 + + K L E+ LR L+ L+R+ SL Q +L + Sbjct: 538 QRWRQQLQQWQEQREQSKALLEQQQALRDALEISLASLERERMLALRIASLEQHRASLEE 597 Query: 580 -QWQAVTASLNI--TLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQ 636 + SL LQ L W +D R Q L+ ++ Q ++ Sbjct: 598 GHACPLCGSLEHPYLLQGLPASDNWQQVEDVRRRFAMTDQQCAALRERLTGLEQNLLVGM 657 Query: 637 QQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ--- 693 + Q L + A + + A +++Q LT L ++ Q Sbjct: 658 ENARSLQDKLQGSQEYLAQLAEKAGLPSLLREPPESAATFVREQQERLTELLRQLYQRIS 717 Query: 694 ----LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQK 749 L L + ++T++ + Q + ++QQ ++Q+ Q ++ Sbjct: 718 AAGKLEETCRMLESNVPRMQEQKTMLDQAVEQFKHELALATAEQQRMRQELAQLRQEGEQ 777 Query: 750 AQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQ 809 + DT L A L + + E ++ A + + + + L Sbjct: 778 GRQALDTMLAAYGLGIAGGELLHISSALKTRRTE------WERQTAALSRLAASRQELEL 831 Query: 810 HQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQ 869 + + +E Q+E + + ++ + + + Q + + Sbjct: 832 AASQHDQEVKSQQAHLESQQREAREREGQWKKLHEQRLALFAEKDVQEVEADLAQAVTRD 891 Query: 870 IAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTR 917 ++ Q ++ ++ E K A ++ A Q + Sbjct: 892 EQRLADQTAAVSRMSDVVTMTESAIREKDALLASIAEQTVHAGQAFAQ 939 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 183/871 (21%), Positives = 326/871 (37%), Gaps = 23/871 (2%) Query: 183 GQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQE 242 + Q ++ +LE + + V L +Q Q+L + + L +Q+ Sbjct: 349 QARQTPLLHQVRALDIQLESSEKEVRRVLLEVRQQEQALASLKARCDSRRQALDDILRQQ 408 Query: 243 QQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAA-LSLAQPARNLRPHWERIAE 301 +WL + + + Q Q ++L Q ++ L R+AE Sbjct: 409 ASVESWLEKHAADAGLVEQLSGIEAGIQRAHDLEQKQQQRDMALRQISQQLEKGNARLAE 468 Query: 302 HSAALAHIRQQIEEVNTRLQSTMALRASI---------RHHAAKQSAELQQQQQSLNTWL 352 ++ +V R Q + + + + ++ Q + Sbjct: 469 RLRHQEVAAAELAQVENRRQQLVEEKEKLLEGRSLLQWQEEYNGIQKKILLLQAVEKSLK 528 Query: 353 QEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVA 412 + + Q+ + L Q Q E L +L + Sbjct: 529 DVFLYHAELQRWRQQLQQWQEQREQSKALLEQQQALRDALEISLASLERERMLALRIASL 588 Query: 413 TALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKE 472 E+ +L + Q + +++V + + +R+R Sbjct: 589 EQHRASLEEGHACPLCGSLEHPYLLQGLPASDNWQQVEDVRRRFAMTDQQCAALRERLTG 648 Query: 473 KTQQLAD-VKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 Q L ++ + +++ + AQL P + + + Sbjct: 649 LEQNLLVGMENARSLQDKLQGSQEYLAQLAEKAGLPSLLREPPESAATFVREQQERLTEL 708 Query: 532 LLALENEVK---KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 L L + KL E L + + +Q + + + + T + Q + L Sbjct: 709 LRQLYQRISAAGKLEETCRMLESNVPRMQEQKTMLDQAVEQFKHELALATAEQQRMRQEL 768 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 Q + + LD + + + + + + + Sbjct: 769 AQLRQEGEQGRQALDTMLAAYGLGIAGGELLHISSALKTRRTEWERQTAALSRLAASRQE 828 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI---QQLTPILETLPQSD 705 + + +++ L ++Q+EA+ + + +L + + + + + L Q+ Sbjct: 829 LELAASQHDQEVKSQQAHLESQQREAREREGQWKKLHEQRLALFAEKDVQEVEADLAQAV 888 Query: 706 ELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDD 765 ++ + S + A+ A F LQ F D Sbjct: 889 TRDEQRLADQTAAVSRMSDVVTMTESAIREKDALLASIAEQTVHAGQAFAQGLQQEAFTD 948 Query: 766 QQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTV 825 +++FL A + + LE+L Q L R + E LA T Sbjct: 949 ERSFLQACLPAEEREGLERLSQELHEVRMELAGRSRAAREHLATETAKAL-----TTKNR 1003 Query: 826 EQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNS 885 E++ QELA + QG Q+L + RQ+Q+ L+++I Q + E W L Sbjct: 1004 EELGQELATLEHQQAALQQEQGSCLQRLADNERVRQEQRLLVERIEQQERVFEQWSALQE 1063 Query: 886 LIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAV 945 LIGS +G KFR Q + L+ +V AN+QL ++ RY+L+ + LE+ + D +QA + Sbjct: 1064 LIGSADGKKFRNIVQQMNLELMVAHANRQLVKMTDRYVLE-VGNGPLELNIHDNYQAGEL 1122 Query: 946 RDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALN 1005 R T+ LSGGESFLVSLALAL LS + S TR+DSLFLDEGFGTLD + LDTAL L +L Sbjct: 1123 RSTKNLSGGESFLVSLALALGLSQMASRTTRVDSLFLDEGFGTLDEDALDTALSTLASLQ 1182 Query: 1006 ASGKTIGVISHVEAMKERIPVQIKVKKINGL 1036 GK IG+ISHV+ +KER+P QI+V + G Sbjct: 1183 QRGKLIGIISHVQGLKERVPTQIEVLPVGGG 1213 >UniRef50_Q2BJK3 Nuclease sbcCD subunit C n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJK3_9GAMM Length = 1231 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 252/912 (27%), Positives = 398/912 (43%), Gaps = 23/912 (2%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLR KN+N+L+ EWKIDFT FA NGLFAITGPTGAGKT++LDAICLALYH TPR Sbjct: 1 MRILSLRFKNINALRDEWKIDFTSGEFAENGLFAITGPTGAGKTSILDAICLALYHRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L +SQS N+LMTR TA+ LAEVEFEVKG++YRAFWSQ R+R++ +GNLQ +VELAR Sbjct: 61 LRTISQSTNELMTRGTADALAEVEFEVKGQSYRAFWSQRRSRDKAEGNLQEAKVELARLG 120 Query: 121 D--GKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTG 178 D +ILA +VK K +L ++GLD+ RFT+SM+LSQGQFAAFLNA +RAELLEELTG Sbjct: 121 DQGDEILASQVKVKNQLIEQISGLDFERFTKSMMLSQGQFAAFLNADANDRAELLEELTG 180 Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 TEIYG IS V+E+ KSA E++ L+A+A GV LL+ EQ+ L+ V++ + K Sbjct: 181 TEIYGLISERVYERFKSASDEVKHLEARAEGVELLSVEQLAELSEQQTVISTQLKSTEQQ 240 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 +Q Q W + +Q + Q QQ E E L L+ ++PA LR ++ Sbjct: 241 HKQLQAEQRWWNDYSKAEQTLTEAQLGQQQVAKEREAHAEDLDRLAASEPAEKLRAPYQI 300 Query: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH-DR 357 + + + QQI E ++ +A +S L + +Q + D+ Sbjct: 301 LKAVQQRVTSLVQQIAEQTPQITMLNQQKADAEVQLKSKSVALDEAKQKAQDQERLINDQ 360 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTAD--EVATAL 415 ++E A ++QF+ +S++++ R +L L L E +A Sbjct: 361 VVPLDSEIARLQSQFADASSEQQNTRSQVDKLNQQLADLKQRGEADLEQLKAITEHLSAQ 420 Query: 416 AQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQ 475 + A Q + Q L Q+ V++Q ++Q++ A + + E+ Sbjct: 421 THLNDLTERLPLWRAQLDQELQLQAELKQIAVSLQQRAEQQSKDQAEHAALELQISEQQS 480 Query: 476 QLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEA--YQALEPGVNQSRLL 533 L ++T + + L+ + P + + A + Sbjct: 481 LLEPLETELRDCLQQLQVSLAGRNLEVLEADFSRLQAQQPLLTEMRHSAEQFAQLSQEQT 540 Query: 534 ALENEVKKLGEEGATLRGQLDAITKQ-----------LQRDENEAQSLRQDEQALTQQWQ 582 +++ L + QL + +Q + E E + + + Q Sbjct: 541 MATAQLQTLQNQLNLTDSQLAGLREQWPLKNQAVKDLKKLLEQERKINSLEAERAKLQAG 600 Query: 583 AVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQR 642 PL LD D +R + EL+ Q N Q + Sbjct: 601 EACPLCGSHEHPLVAEYQTLDVSDTEQRLQVEEAALDELKQQGTTLNSQRQLLVETQIPE 660 Query: 643 QQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLP 702 + L+ L L Q + + + + ++ QL LE L Sbjct: 661 LEQKLSQLADQLSQLQQRWQSVQQQMGTELSLNDQPAIISHIDGSTGQMAQLQGELEALR 720 Query: 703 QSDELPHCE---ETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQ 759 + + + +++ + +QQ QQQ +Q Q+ Q D Sbjct: 721 ALYKQEQQQTLALQTAEQTLQKLQAELALQLQKQQANQQQSAAESQRQQQLNEQLDALQV 780 Query: 760 ASVFDDQQAFLAALMDEQTLTQLEQLKQNLEN--QRRQAQTLVTQTAETLAQHQQHRPDD 817 + + L + + LEQL + Q+ + Q +++ ET + Sbjct: 781 QLKAEVEAYQLVMPEPTEAIIWLEQLSKQCLELRQQHELQAELSKRTETQSVEIGQIEIQ 840 Query: 818 GLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQV 877 + + + + ++ L + + + + Q Q+ L AQ Q+ Sbjct: 841 IVEANKRLAERDERVSGLTSTLADKQSLRKALFSDQIVTDVREQMQKDLSTAEAQHQAQL 900 Query: 878 EDWGYLNSLIGS 889 + S Sbjct: 901 HLLQEAETASKS 912 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 283/963 (29%), Positives = 418/963 (43%), Gaps = 102/963 (10%) Query: 186 SAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQS 245 + E+ A ++ + + ++++ + L + + Q Sbjct: 269 QQVAKEREAHAEDLDRLAASEPAEKLRAPYQILKAVQQRVTSLVQQIAEQTPQITMLNQQ 328 Query: 246 LNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAA 305 Q + + A + Q Q +A+ + Sbjct: 329 KADAEVQLKSKSVALDEAKQKAQDQERLINDQVVPLDSEIARLQSQFADASSEQQNTRSQ 388 Query: 306 LAHIRQQIEEVNTRLQSTMALRASIRHHAAKQS------AELQQQQQSLNTWLQEHDRFR 359 + + QQ+ ++ R ++ + +I H + Q+ L + L+ LQ + Sbjct: 389 VDKLNQQLADLKQRGEADLEQLKAITEHLSAQTHLNDLTERLPLWRAQLDQELQLQAELK 448 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLT--------HAEQKLNALAAITLTLTADEV 411 Q Q S+ ++ L + L L + + Sbjct: 449 QIAVSLQQRAEQQSKDQAEHAALELQISEQQSLLEPLETELRDCLQQLQVSLAGRNLEVL 508 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 ++ Q+PL + Q + +Q + + ++ L +R+++ Sbjct: 509 EADFSRLQAQQPLLTEMRHSAEQFAQLSQEQTMATAQLQTLQNQLNLTDSQLAGLREQWP 568 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 K Q + D+K + EQE +I +LEA+RA+LQAG+ CPLCGS HP V YQ L+ + R Sbjct: 569 LKNQAVKDLKKLLEQERKINSLEAERAKLQAGEACPLCGSHEHPLVAEYQTLDVSDTEQR 628 Query: 532 LLALENEVKKLGEEGATLRGQLDAI-TKQLQRDENEAQSLRQDEQALTQ----------- 579 L E + +L ++G TL Q + Q+ E + L L Q Sbjct: 629 LQVEEAALDELKQQGTTLNSQRQLLVETQIPELEQKLSQLADQLSQLQQRWQSVQQQMGT 688 Query: 580 -------------------QWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHE 620 Q + L Q A E+ L+ L Sbjct: 689 ELSLNDQPAIISHIDGSTGQMAQLQGELEALRALYKQEQQQTLALQTAEQTLQKLQAELA 748 Query: 621 LQGQIAA--------HNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQ 672 LQ Q +Q+ Q +Q++ Q L + Y L +P+ E WL + Sbjct: 749 LQLQKQQANQQQSAAESQRQQQLNEQLDALQVQLKAEVEAYQLVMPEPTEAIIWLEQLSK 808 Query: 673 EAQSWQQRQNELTALQNRIQQ--------------------------------------- 693 + +Q+ L R + Sbjct: 809 QCLELRQQHELQAELSKRTETQSVEIGQIEIQIVEANKRLAERDERVSGLTSTLADKQSL 868 Query: 694 ---------LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 +T + E + + + L ++ + + LQQQ V Sbjct: 869 RKALFSDQIVTDVREQMQKDLSTAEAQHQAQLHLLQEAETASKSAQAALAQLQQQHVAET 928 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 + +K A++ L +S F D+ F+AAL+DE T+L+ L L+ + Q L+ Q Sbjct: 929 EGQEKQLAEWQQILGSSQFADEAEFVAALLDETERTELKALADRLKQAQEHNQALLKQAQ 988 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 A Q AL +Q++LA L++ +GE+ QL+QD R QQ Sbjct: 989 AQHADLQAQGEAAKYALEHA-TPLQEQLASIETALKDLIHQRGEVSSQLEQDKQRRNSQQ 1047 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 L QI ++ +D YLNSL+GS+ GDKFR+FAQGLTLD+LV+LAN QL RLHGRY L Sbjct: 1048 QLFAQIEAAKRRYDDLAYLNSLVGSQRGDKFRRFAQGLTLDHLVYLANNQLDRLHGRYQL 1107 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 QRK SEALE++VVDTWQAD VRDT+TLSGGESFLVSLALALALSDLVS KT IDSLFLDE Sbjct: 1108 QRKQSEALELQVVDTWQADTVRDTKTLSGGESFLVSLALALALSDLVSQKTSIDSLFLDE 1167 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFGTLDSETLDTALDALD+LNASGK IGVISH+EAMKERIP+QIKV+K +GLG S+LE+ Sbjct: 1168 GFGTLDSETLDTALDALDSLNASGKMIGVISHIEAMKERIPLQIKVRKQSGLGISRLENQ 1227 Query: 1045 FAV 1047 + V Sbjct: 1228 YQV 1230 >UniRef50_C9M6Q3 Putative ATP-dependent dsDNA exonuclease n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6Q3_9BACT Length = 895 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 154/738 (20%), Positives = 291/738 (39%), Gaps = 23/738 (3%) Query: 2 KILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRL 61 ++ + L+NLNSL G W ++F ++ GLFAI GPTGAGK++LLDAICL LY TPRL Sbjct: 9 RLCRVSLENLNSLAGSWSVNFEEPAYSG-GLFAILGPTGAGKSSLLDAICLGLYGATPRL 67 Query: 62 SNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARC-- 119 ++Q N+LMT C A V F GE ++A WSQ+R+ N P G LQ R L R Sbjct: 68 GAITQGTNELMTHGAGSCKASVTFCAAGETWQAVWSQHRSGNHPSGALQPQRHRLGRVKR 127 Query: 120 ----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEE 175 +++A+K+ D L G+D+ +FTRS+L+ QG++A+FL+A P ERA LLE+ Sbjct: 128 ENGVDTVELVAEKINDVRAKITELLGMDFVQFTRSVLIPQGKWASFLSAPPSERAALLEK 187 Query: 176 LTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQL 235 LTG E Y +IS V E K T A+ + + + E QSL A ++ L K Sbjct: 188 LTGAEKYSKISERVSESWKINETLFAAKNAELDALNVPSCEDAQSLQAEVEELRSRRKIS 247 Query: 236 ITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPH 295 Q+ ++ +++++ + ++ ++ L + A L Sbjct: 248 SDELQEVEEKRGNAALWAAYERDSAALEADRKKFESDLSAFAADRLRLERHEAAEPLFLA 307 Query: 296 WERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEH 355 + + + A ++ ++ L+ R + Q AE Q+ L ++ Sbjct: 308 QKELEKKRDASLSLKNELAAREKELKEARLSLDEKRAAYSAQEAERQRALDELREERRQT 367 Query: 356 DRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAIT-LTLTADEVATA 414 + + Q + ++ + A QK+ T DE A Sbjct: 368 REALSELEDRSALEGTLFQLSQLELEEKELSEAEKTAAQKIAGTNDEIKEAATEDERVRA 427 Query: 415 LAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 AE+ L L +V + Q + + A + + Sbjct: 428 ALAQAEKGLEASCLSKLRSSLVEGLPCPLCGALHHQPIAGQPQDVQAGEEPV---LSARN 484 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 L + + E R+KTLE + + Q A + + + G + A Sbjct: 485 AVLKAGRRLAMLEERLKTLENELGTIHRRQ-----------ADWSERRRKFGEPDLLISA 533 Query: 535 LENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSL-RQDEQALTQQWQAVTASLNITLQ 593 L V+ + + L +++ ++ Q+ ++ + D +++ ++ + + + Sbjct: 534 LSRRVEAVISQHDALTEKMEKLSAQIDELQSGTNDAPKSDMRSMEERTNRLEGLIEGIKK 593 Query: 594 PLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGY 653 + + + + +R L ++ + E +L + Sbjct: 594 TIAETDRTAEEALRERDAEKNKLERRGLPTSLSELRLSDGEAAALKETAGELSRRAASFE 653 Query: 654 ALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEET 713 + + E + ++A++ L + + E +++ + Sbjct: 654 GRSGEVKKRAEGLPSRPAEDAEALAAECETLREKMGALDRELGQTEERLNAEKRLSEKRG 713 Query: 714 VVLENWRQVHEQCLALHS 731 ++ + +++ Q L Sbjct: 714 LLQKEVQEMKGQLELLRE 731 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 145/709 (20%), Positives = 261/709 (36%), Gaps = 39/709 (5%) Query: 364 EPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRP 423 E A + + + + + E A A L A + AE Sbjct: 180 ERAALLEKLTGAEKYSKISERVSESWKINETLFAAKNAELDALNVPSCEDAQSLQAEVEE 239 Query: 424 LRQHLVALHGQIVPQQKR---------LAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKT 474 LR ++ +++ + A++ ++ +A R R + Sbjct: 240 LRSRRKISSDELQEVEEKRGNAALWAAYERDSAALEADRKKFESDLSAFAADRLRLERHE 299 Query: 475 QQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLA 534 E E + + + +L A + S A + + Q L Sbjct: 300 AAEPLFLAQKELEKKRDASLSLKNELAAREKELKEARLSLDEKRAAYSAQEAERQRALDE 359 Query: 535 LENEVKKLGEEGATL--RGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITL 592 L E ++ E + L R L+ QL + E E + L + E+ Q+ + Sbjct: 360 LREERRQTREALSELEDRSALEGTLFQLSQLELEEKELSEAEKTAAQKIAGTNDEIKEAA 419 Query: 593 QPLDDIQPWLDAQDEHERQLRLLSQRHELQGQI------AAHNQQIIQYQQQIEQRQQLL 646 + ++ L ++ L R L + A H+Q I Q ++ ++ + Sbjct: 420 TEDERVRAALAQAEKGLEASCLSKLRSSLVEGLPCPLCGALHHQPIAGQPQDVQAGEEPV 479 Query: 647 LTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDE 706 L+ + E L T + E + +RQ + + + + + ++ L + E Sbjct: 480 LSARNAVLKAGRRLAMLEERLKTLENELGTIHRRQADWSERRRKFGEPDLLISALSRRVE 539 Query: 707 LPHCEETVVLENWRQVHEQCLALHSQQQTL-QQQDVLAAQSLQKAQAQFDTALQASVFDD 765 + + E ++ Q L S + + + + + + D Sbjct: 540 AVISQHDALTEKMEKLSAQIDELQSGTNDAPKSDMRSMEERTNRLEGLIEGIKKTIAETD 599 Query: 766 QQAFLAALMDEQTLTQLEQ---------------LKQNLENQRRQAQTLVTQTAETLAQH 810 + A A + +LE+ L+ + + Sbjct: 600 RTAEEALRERDAEKNKLERRGLPTSLSELRLSDGEAAALKETAGELSRRAASFEGRSGEV 659 Query: 811 QQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQI 870 ++ E + E +K+ G+ ++L + +++ L +++ Sbjct: 660 KKRAEGLPSRPAEDAEALAAECETLREKMGALDRELGQTEERLNAEKRLSEKRGLLQKEV 719 Query: 871 AQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASE 930 +M Q+E L L+GS KFRKF Q LT L+ AN L L GRY L +E Sbjct: 720 QEMKGQLELLRELYGLVGSAT--KFRKFVQTLTFHFLLRQANVHLDELSGRYALVPDKNE 777 Query: 931 ALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLD 990 ++ V+D WQ VR R+LSGGESFLV +L+L+ + + LFLDEGFG LD Sbjct: 778 PMDFAVMDRWQGGTVRSARSLSGGESFLV----SLSLALALGRRRSGGVLFLDEGFGNLD 833 Query: 991 SETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYS 1039 E+LD L AL+AL +G +GVISHV A+K+RI +I+V + +G Sbjct: 834 EESLDGVLTALEALKGAGGLVGVISHVSALKDRISCRIQVSRSSGWSSV 882 >UniRef50_Q0AW76 Exonuclease n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW76_SYNWW Length = 1223 Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats. Identities = 200/925 (21%), Positives = 373/925 (40%), Gaps = 40/925 (4%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MKI +R +NLNSL GEW IDF+ + S+G+FAITGPTGAGKTT+LDAICLALY TPR Sbjct: 1 MKIKQIRFQNLNSLVGEWIIDFSHPAYLSDGIFAITGPTGAGKTTVLDAICLALYGRTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 L V++S N++M+R T C AE+ FE + YR WSQ RAR P G LQ R E+A Sbjct: 61 LERVNKSSNEIMSRHTGSCYAEISFETREGYYRCHWSQQRARKNPQGELQPHRHEIADAH 120 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 G+IL +K++D +TG+++ RFTRS++L+QG FAAFL A ERA +LE++TGTE Sbjct: 121 SGQILENKIRDVAARVERITGMNFTRFTRSIMLAQGGFAAFLQAPADERAPILEQITGTE 180 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IY +IS V E+ + L+ LQA+ SG+ LLT E+ ++L +Q K+ + Sbjct: 181 IYSEISRKVHERQREENDRLKILQAEISGIKLLTTEEEEALRQDMQAKIARGKERQEELK 240 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 Q L+WL R + E ++ QQ L ++ Q + L A+ A L + R+ Sbjct: 241 GLQLVLDWLDRMVGWENEIKDIEEQWQQYLKRQQAFQGEAWRLEKARQAMVLDAPYIRLK 300 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 + +IE + L EL + + + + + R+ Sbjct: 301 DLRDLQKSNLSEIERIREELPRQKEAAGKAAERWENSRQELIELKLLRKSEGETAKKVRE 360 Query: 361 WNNEPAGWRAQFSQQTSD----REHLRQWQQQLTHAEQKLNALAAITLTLTA-----DEV 411 + Q ++T +K + L + + Sbjct: 361 MDILLKQQGQVIKGMEVAIGTSENECSALQGEITSGVEKAKEMGQALLAIEEYRRKNAQD 420 Query: 412 ATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYK 471 A LA + + L L + + +A+Q++ + + A ++ + Sbjct: 421 AALLANLTGISRVFKRLEELLSTWQQKGLERQRAALALQSLLDARKEIAATHESNKELQR 480 Query: 472 EKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSR 531 ++ L + E+ + + R +L+ + + Sbjct: 481 QQYDVLQAEQDKLEEALQGYEIAWWRDELEQFKE-----QNDKLQNLGQVWDWMVQLEDN 535 Query: 532 LLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNIT 591 + +++L E+ L +++ K+ L L + + + Sbjct: 536 IRNGRESIQQLDEQQKRLVWEIEQGEKEAGHLAARIDGLETRVLLLN-RIRDLEEERAQL 594 Query: 592 LQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLT 651 + + + + + Q ++++ + ++ E + L + Sbjct: 595 EDGKACPLCGATEHPYAQGNIPQMDESQKELNQARKQHKKLSEDLKKKEILRGKLDKEVE 654 Query: 652 GYALTLPQEDEEESWLATRQQEAQSWQ-------QRQNELTALQNRIQQLTPILETLPQS 704 + + +++ + ++E + + ++EL L N+ +Q + Sbjct: 655 HSGAAVKEAEQQLEKESKLRREGMNELGLDLSVVKTRDELERLANQSRQNIINHSRQLKM 714 Query: 705 DELPHCEETVVLENWRQVHEQCLALHSQQQTL---QQQDVLAAQSLQKAQAQFDTALQAS 761 E + ++ + + + Q Q+Q + LQ+ L+ Sbjct: 715 IETWQKNIGTLTLHYEKSRTAFIQSDKELQAAILQQKQADQEDERLQQEYLSLQGELEQL 774 Query: 762 VFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLAL 821 + + M + L QL +++ L+ ++++ + + L L Sbjct: 775 QEETLREISPYGMADLPLEQLAAIQKVLDERKKRWEAKEKE---------------KLDL 819 Query: 822 TVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWG 881 V+++ E+ Q L++ ++ R++LKQ + ++QQ ++ ++ Sbjct: 820 EKAVDKLHNEVEQKRILLKDKASALQSERERLKQQQEQYRRQQETRFELYGKRDPDKEEA 879 Query: 882 YLNSLIGSKEGDKFRKFAQGLTLDN 906 L+ IG E R + L Sbjct: 880 RLDEEIGLAEELVNRTYEDMQELQR 904 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 186/920 (20%), Positives = 359/920 (39%), Gaps = 95/920 (10%) Query: 206 QASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQA 265 + + L + + + L +++ A ++ + S L L++ + Sbjct: 298 RLKDLRDLQKSNLSEIERIREELPRQKEAAGKAAERWENSRQELIELKLLRKSEGETAKK 357 Query: 266 LQQALAEEEKAQPQLA--ALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQST 323 +++ ++ + +++ I + Q + + Sbjct: 358 VREMDILLKQQGQVIKGMEVAIGTSENECSALQGEITSGVEKAKEMGQAL-LAIEEYRRK 416 Query: 324 MALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLR 383 A A++ + S ++ ++ L+TW Q+ ++ + + E + Sbjct: 417 NAQDAALLANLTGISRVFKRLEELLSTWQQKGLERQRAALALQSLLDARKEIAATHESNK 476 Query: 384 QWQ-QQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRL 442 + Q QQ + + + L L Q EQ Q+L + +V + + Sbjct: 477 ELQRQQYDVLQAEQDKLEEALQGYEIAWWRDELEQFKEQNDKLQNLGQVWDWMVQLEDNI 536 Query: 443 AQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQA 502 + +IQ + ++Q + + + + ++ ++T RI+ LE +RAQL+ Sbjct: 537 RNGRESIQQLDEQQKRLVWEIEQGEKEAGHLAARIDGLETRVLLLNRIRDLEEERAQLED 596 Query: 503 GQPCPLCGSTSHP----------------AVEAYQALEPGVNQSRLLALENEVKKLGEEG 546 G+ CPLCG+T HP Q + + + L ++ K E Sbjct: 597 GKACPLCGATEHPYAQGNIPQMDESQKELNQARKQHKKLSEDLKKKEILRGKLDKEVEHS 656 Query: 547 ATLRGQLDAITKQLQRDENE--------------AQSLRQDEQALTQQWQAVTASLNITL 592 + + ++ + E L + Q + L + Sbjct: 657 GAAVKEAEQQLEKESKLRREGMNELGLDLSVVKTRDELERLANQSRQNIINHSRQLKMIE 716 Query: 593 QPLDDI--------QPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 +I + + + Q+ + + Q+ + Q ++EQ Q+ Sbjct: 717 TWQKNIGTLTLHYEKSRTAFIQSDKELQAAILQQKQADQEDERLQQEYLSLQGELEQLQE 776 Query: 645 LLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQS 704 L ++ Y + ++ + + + W+ ++ E L+ + +L +E Sbjct: 777 ETLREISPYGMADLPLEQLAAIQKVLDERKKRWEAKEKEKLDLEKAVDKLHNEVEQKRIL 836 Query: 705 DELPHCEETVVLENW--------------------------------------------- 719 + E Sbjct: 837 LKDKASALQSERERLKQQQEQYRRQQETRFELYGKRDPDKEEARLDEEIGLAEELVNRTY 896 Query: 720 ---RQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 +++ L L +++TL A LQ ++ F LQ + F+ ++ + A + Sbjct: 897 EDMQELQRHQLRLEEREKTLAVTVQNRAPELQSSEESFTRQLQQAGFEQEEDYRQARLSL 956 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + L Q + L + + QT + E L + ++ + E ++++ Sbjct: 957 EEQQALAQKAEALTKEATELQTRLKDRQEKLQREKEQKLSGEAR-----EVLEEKQRLGE 1011 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFR 896 Q+L + G R+ L+ +R++ QT +Q++ + ++++ W L+ LIGS +G K+R Sbjct: 1012 QELIDLREEIGAARRTLEDSEQSRRRMQTQLQRVEEQKKELQRWQLLHDLIGSADGKKYR 1071 Query: 897 KFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGES 956 FAQGL+ D ++ AN+QL ++ RY+L R + LE+ ++D +QA +R T LSGGES Sbjct: 1072 NFAQGLSFDIMIKHANRQLHKMSDRYILLRSQEQPLELNIIDNYQAGEIRSTANLSGGES 1131 Query: 957 FLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISH 1016 FLVSLALAL LS + S K +DSLFLDEGFG LD + LDTAL+ L L GK IGVISH Sbjct: 1132 FLVSLALALGLSQMASRKVSVDSLFLDEGFGALDEDVLDTALNTLAGLQQDGKLIGVISH 1191 Query: 1017 VEAMKERIPVQIKVKKINGL 1036 V A+KERI QI+V +G Sbjct: 1192 VPALKERISTQIEVITQSGG 1211 >UniRef50_C1SG11 Chromosome segregation protein SMC n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG11_9BACT Length = 1111 Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 138/1139 (12%), Positives = 357/1139 (31%), Gaps = 131/1139 (11%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 MK SL ++ S + I+F G+ + GP G+GK+ +LDAI ++ + Sbjct: 1 MKFKSLVVQGFKSFVDKTVIEFP------GGITCVIGPNGSGKSNILDAIRWIFGEQSAK 54 Query: 61 LSNVSQSQNDLM-----TRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVE 115 + + + + T + E+ A W + + Sbjct: 55 ELRGADMDDVIFAGSQHRKPTGFAEVSLTLSELPESLTAKW--------GSFSEITVSRK 106 Query: 116 LARCADGKILADKVKDKLELTATL---TGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 R D + + K +L+ + +G+ ++ QG+ + + P++ Sbjct: 107 HYRTGDREYRINGKKCRLKDIREIFYDSGIGA---RSISIIEQGKVEKIIQSTPEDLRAF 163 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLT--ASLQVLTD 230 EE G + + + + L ++ + + + L+ Sbjct: 164 FEETAGVMRFKERKKEAERRLYQTKDNLSRVTDIIAEIRAQMETLSVQTDRVKRYRELSA 223 Query: 231 EEKQLIT------------AQQQEQQSLNWL--------TRQDELQQEASRRQQALQQAL 270 ++ L ++ +++N L + +L + L + Sbjct: 224 KQSALSKSVIFHRYSKSFSDLKEITETVNQLKIDLSGYTEKFTKLTNIETEISSKLSTSR 283 Query: 271 AEEEKAQPQLAALSLA--QPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRA 328 E + + ++R I + + IE + +L R Sbjct: 284 KEYNSKNELILQAESESGKTEADIRLLENEIEAAEKSKDSLHGDIEFLQKKLNELTERRV 343 Query: 329 SIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHL------ 382 ++ ++Q+ +L++ ++ ++ + + + + Q + Sbjct: 344 NVLESKSEQTEKLKETEEKIDEFNERIADYETMREDIKEEMFALDDQYLELAQRASDTRN 403 Query: 383 -----RQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVP 437 + +++L + + Q ++ L L + + Sbjct: 404 AIFENETLLTRSEKDKERLRNEKEESEKDSQFARKNIEDQSSDVDRLTLELETIAETLEH 463 Query: 438 QQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKT----- 492 ++L+ I + E + + + + R K TQ L + + ++ Sbjct: 464 YSDEHSELRDEISVIETELSDKQIEVKSINSRIKMLTQSLDAESASDDIKQILEATGGTL 523 Query: 493 -----LEAQRAQLQAGQPCPLCGSTSHPAVEAYQAL------------EPGVNQSRLLAL 535 E +L P T + ++ + A Sbjct: 524 LLPKLTEELTRELGDLIIIPENVKTDIAEILRDVKQSVRFVYENDVDALIDYAENNIDAG 583 Query: 536 ENEVKK-----------LGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAV 584 EN V+ E L+ Q++ +L + + + + L Q LT++ + + Sbjct: 584 ENIVRNGFIHRKPGADDKRENVIRLKKQIEGYETELTKAQKDCEELEQSLPELTEKLELL 643 Query: 585 TASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ 644 + L+ LD +D L S+ L + + + +I +IEQ ++ Sbjct: 644 ADKKDELLEQ--KQTTTLDLKDRERSLNDLKSRHERLSKRSSIIDSEIQNIDSEIEQAKE 701 Query: 645 LLLTTLTGYALT----LPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET 700 + +E+E+++ + + ++ ++EL+A + ++ + + Sbjct: 702 KIEYLKEQNKELSVSIAAKEEEKDAMQSKLEDIDNMYEDVRDELSAYRVEMRGIQEKMNA 761 Query: 701 LPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQA 760 + + + L + V +L+K + + ++ Sbjct: 762 VTNELHFIDRDLDESSTKLTAAKNRLSKL------VTSDIVTLKDNLEKKRIDYQNVIKK 815 Query: 761 SVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLA 820 + + + QLE ++++ +++ + + ++++ + Sbjct: 816 RQSLNDEKLRLDHQIAEMEKQLEDFGRDIDKMNLHIKSIEDDIFDAEKKMERYQTEVSAQ 875 Query: 821 LTVTVEQIQQELAQTHQKLRE-----NTTSQGEIRQQLKQD----ADNRQQQQTLMQQIA 871 +E+ ++ L + I + ++ + Q ++++ Sbjct: 876 TEAFLEKFNDDITSFEMDLTDFQPNKAKNELSTIERDIESLGPLNMAAENEYQEVVERNE 935 Query: 872 QMTQQVEDWG----YLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRK 927 ++ Q ED + LI + + F T + + ++ + L G K Sbjct: 936 FLSAQKEDLEGAVTSIYELIREMDENTSALFL--ETFEGVKKNFSRVFSILFGNGNCDLK 993 Query: 928 ASEALEV-----EVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFL 982 S+ ++ E+ +++ LSGGE + + L AL FL Sbjct: 994 LSDPDDILHSGVEIFVQPPGKKLQNMNLLSGGEKAMSACTLLFALFLY----RPTPFCFL 1049 Query: 983 DEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKL 1041 DE LD ++ + L+A + + +ISH + V + G S++ Sbjct: 1050 DEIDAPLDDNNVERFTKIVKTLSADTQFV-IISHNQKTMAEADSIYGVT-MQEPGVSRI 1106 >UniRef50_C7MYM8 ATPase involved in DNA repair n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MYM8_SACVD Length = 986 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 139/825 (16%), Positives = 277/825 (33%), Gaps = 31/825 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M++ L + G +DF ++GLF + G TGAGKTTLLDA+ AL+ P Sbjct: 1 MRLHRLEVCAFGPYAGREVVDFD--ALGADGLFLLHGDTGAGKTTLLDAVAFALFGAVPG 58 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDG---NLQVPRVELA 117 + + +E V+G R S R + G Q + L Sbjct: 59 ARGQVKRLRCDLADADTPTEVVLELTVQGHHLRIVRSPEYERPKRRGEGYTTQPAKASLT 118 Query: 118 RC-----ADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAEL 172 ++ + + L G++ +F + +LL QG+FA FL A ER +L Sbjct: 119 WLSPPPDGGTAEAVTRIDEVGRIVERLLGMNAQQFFQVVLLPQGEFAKFLRADTTEREKL 178 Query: 173 LEELTGTEIYGQISAMVFEQHKSARTELEKLQAQ----ASGVTLLTPEQVQSLTASLQVL 228 LE L GTE + + + R ELE ++ + + + E++ + Sbjct: 179 LERLFGTERFAVVEQWFRDLRAERRAELEHRRSGVRDWVARLAQVAGEEIPEDPDR-DWV 237 Query: 229 TDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQP 288 +++ ++ + E Q + ++A + L A +LA L Sbjct: 238 VTLQRRAAAEVDTARREESDARLAWEEAQARLQERRAAAERLRRVRAAHTRLAELEQRSE 297 Query: 289 ARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSL 348 R A +A +A + + E + +A + + + + Sbjct: 298 ERVRWSTELEAARRAATVAELVAEAEAGEEQYDREVAEEEAAARICREL--GFTELDLDV 355 Query: 349 NTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTA 408 R+ +G Q +Q +DR+ L + + ++++ + + L Sbjct: 356 AELRDRAGALREEAGGLSGLVDQAQRQHADRQRLDVLDKLIADDKERIAIVQSKLDGL-P 414 Query: 409 DEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQ 468 + V L Q L + + L + + + +E AA N Sbjct: 415 ERVGELLRQRELAVEAEAKLEGVRAKEAELTALLVDAEA-LPELERELEDARAAENTAFA 473 Query: 469 RYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVN 528 Y E Q L D++ AQL AG+PCP+CGS HP + Sbjct: 474 AYNEAKQALLDLRER----RLAGMAAELAAQLAAGEPCPVCGSEQHPEPAVATDDAVSED 529 Query: 529 QSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASL 588 + R+ A + + AT + + +A ++ + + + Q + L Sbjct: 530 EERVAAEREAEAERRRDEATAK-RYEAQRRRDAAAQRVGERRVDELAEELAQVRDERDRL 588 Query: 589 NITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLT 648 + ++A + E+ L +++R + ++ + + ++I +R++ L Sbjct: 589 GEHAGKSEAFAASVEAAKKEEQSL--MAERASCERSLSENEAERSLLAERIVERERALAE 646 Query: 649 TLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELP 708 + + D + + A + R + + + Sbjct: 647 ARGEFPDVSARRDHLLALGRAVDRLADARTAVSAAGRQRDERRRSIAEAARRAGFASVDE 706 Query: 709 HCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD-----TALQASVF 763 E ++ +++ + + + D A Q + Sbjct: 707 ALAAARPSERIAELERLITDADAEEAAARGVLDEPDLAGVSPDDEVDVDSAEAAAQEAQK 766 Query: 764 DDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + A A E+T +L L Q E + + + + AE A Sbjct: 767 RSETAVAAVHAAERTARELNTLAQRFEAALAELEPVEWEFAELDA 811 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 105/757 (13%), Positives = 248/757 (32%), Gaps = 47/757 (6%) Query: 313 IEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQF 372 + + + R + A LQ+++ + + + + Sbjct: 241 QRRAAAEVDTARREESDARLAWEEAQARLQERRAAAERLRRVRAAHTRLAELEQRSEERV 300 Query: 373 S-----QQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQH 427 + + + + E++ + A + + Sbjct: 301 RWSTELEAARRAATVAELVAEAEAGEEQYDREVAEEEAAARICRELGFTELDLDVAELRD 360 Query: 428 LVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQE 487 + L Q + + + ++R +L + + Sbjct: 361 RAGALREEAGGLSGLVDQAQRQHADRQRLDVLDKLIADDKERIAIVQSKLDGLPERVGEL 420 Query: 488 ARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGA 547 R + L + G + + A + L Sbjct: 421 LRQRELAVEAEAKLEG----VRAKEAELTALLVDAEALPELERELEDARAAENTAFAAYN 476 Query: 548 TLRGQLDAITKQLQRDENEAQSLRQDEQA-----LTQQWQAVTASLNITLQPLDDIQPWL 602 + L + ++ + + ++Q + + + ++ Sbjct: 477 EAKQALLDLRERRLAGMAAELAAQLAAGEPCPVCGSEQHPEPAVATDDAVSEDEERVAAE 536 Query: 603 DAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDE 662 + R+ ++R+E Q + A Q++ + +++++ + L + Sbjct: 537 REAEAERRRDEATAKRYEAQRRRDAAAQRVGE--RRVDELAEELAQVRDERDRLGEHAGK 594 Query: 663 EESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQV 722 E++ A+ + + Q E + + + + L + + V Sbjct: 595 SEAFAASVEAAKKEEQSLMAERASCERSLSENEAERSLLAERIVERERALAEARGEFPDV 654 Query: 723 HEQCLALHS------QQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDE 776 + L + + + A + + + A + + F LAA Sbjct: 655 SARRDHLLALGRAVDRLADARTAVSAAGRQRDERRRSIAEAARRAGFASVDEALAAARPS 714 Query: 777 QTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTH 836 + + +LE+L + + + A+ ++ + V V+ + + Sbjct: 715 ERIAELERLITDADAEEAAARGVLDEPD---------LAGVSPDDEVDVDSAEAAAQEAQ 765 Query: 837 QKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGS----KEG 892 ++ + + ++ Q+ + + ++ + + + L ++ Sbjct: 766 KRSETAVAAVHAAERTARELNTLAQRFEAALAELEPVEWEFAELDALTDVVNGRGQNARR 825 Query: 893 DKFRKFAQGLTLDNLVHLANQQLTRLH-GRYLLQ-------RKASEALEVEVVDTWQADA 944 R + L+ + A +L + GRY R L ++V+D + Sbjct: 826 MSLRSYVLAARLEEVAVAATARLRSMSQGRYSFVHSDAAGSRGTRGGLGLDVLDDYSG-M 884 Query: 945 VRDTRTLSGGESFLVSLALALALSDLVS---HKTRIDSLFLDEGFGTLDSETLDTALDAL 1001 VR +TLSGGESFL SL+LAL L+D+V+ +D+LF+DEGFGTLDSETLD + L Sbjct: 885 VRPAKTLSGGESFLASLSLALGLADVVAAETGGALLDTLFVDEGFGTLDSETLDVVMGVL 944 Query: 1002 DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGY 1038 D L A G+ +G++SHVE +++R+P +++V+K Sbjct: 945 DELRAGGRVVGLVSHVEELRQRVPTRLRVRKSRSGST 981 >UniRef50_B4WQR3 RecF/RecN/SMC N terminal domain, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQR3_9SYNE Length = 1007 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 187/1052 (17%), Positives = 396/1052 (37%), Gaps = 61/1052 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M L+L+N S + FA + + GP GAGK++LL+AI ++ ++ Sbjct: 6 MVPKQLKLQNFLSYQEVV------LDFAGLHVACVCGPNGAGKSSLLEAIAWCIWGQS-- 57 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 +++D++ + + E FE G++YR ++ R +N Sbjct: 58 ---RVSAEDDIVRQGSLEAQVSFCFEQGGQSYRIIRTRRRCQNSTLEFQIETAA-----G 109 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 + V+ + + +DY F + L QG+ F+ +P ER ++L +L G Sbjct: 110 FRSLTQKGVRATQQYISQQLKIDYETFVNAAYLRQGRADEFMLKRPAERKQVLADLLGLG 169 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 Y Q+S Q K + +++ + ++ E ++ + L + AQ Sbjct: 170 RYDQLSEQAKAQAKDYKAQIQPIALLVDQLSSQL-ETRAAIEQDYRQLQAQIDAGKAAQS 228 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + ++LN L + E + ++ L Q ++ + + + A+ E+I Sbjct: 229 LKIKALNQLRKHQEKRLHLQQQLALLDQEQRHQQDVLSTVG--NALEQAQTQLSSIEQIL 286 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360 +++ + +Q+EE+ + + +K+ QQ Q + T + Sbjct: 287 KNAPTIQQQYEQLEELRRLEEEQSKQFQRYQRIQSKRLRYQQQHTQRVQTRQLRLAQIET 346 Query: 361 WNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420 +E Q + + + + L A+ +L IT +A + Sbjct: 347 QFSELTQQENSLQQSLEQKAEISRRLEALKVAKAQLRQF-DITQAKSAPLRQRFQQLQGQ 405 Query: 421 QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480 R L ++ +++++ QV + + T+ + L + QR + V Sbjct: 406 IAQARTRLATRIEELGSRREQILTQQVQAPQLAESATEISHRLAYLEQR----KKYQEAV 461 Query: 481 KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540 + + + + + L + + + Sbjct: 462 REKGVERRSFMERLRESQRNCEVELGKLDQTLALLEDPDESHCPLCAQALEGANWQKLGD 521 Query: 541 KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600 ++ E+ ++ Q+ AI +QL E+E Q LRQ+ +AL + + ++ L Q + + Sbjct: 522 RVREQREDVQNQIWAIREQLAVSESEIQVLRQEYRALEAELASYSSFLEEKGQLKEKLAS 581 Query: 601 WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660 Q + + +Q + + +++ Q+IE++ + +AL Q Sbjct: 582 VDTWQGQLQEMGAERAQLERCLQE-NDYAEELQGELQRIEKQLAEISYDDRDHALVRSQV 640 Query: 661 DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720 + L + + +Q + L +Q + QL +++ + E + + + Sbjct: 641 E----RLRWSELKHSELKQAERRLIQIQAQRSQLEVEAQSVHAAIEAA--DHHPTAKELK 694 Query: 721 QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780 ++ +Q A Q Q+ ++ ++++ QA + + A L+ T Sbjct: 695 ELDQQLAATRYSLSKHNQIRDELKQA-RQWESKYQRLQQAQMQHIEAARKVNLLSTDYAT 753 Query: 781 QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840 Q +LK +E Q + +T +E +Q L + Sbjct: 754 QTTKLKAVIEKVTTCTQQVFE----------------LRDVTGDIEALQAWLDSYRESRD 797 Query: 841 ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900 + ++ G + Q+L Q ++Q Q +++A + + L G + + Sbjct: 798 QQLSTLGRLDQKLSQLDVVQEQHQAQQKKLADFQHRYLVYKSLADAFG---RNGIQALMI 854 Query: 901 GLTLDNLVHLANQQLTRLHG-----RYLLQRKASEALE-VEVVDTWQADA--VRDTRTLS 952 L L NQ L RL R++ QR + + ++ +D ADA R T S Sbjct: 855 ENLLPQLEATTNQILGRLSHYQLHVRFVTQRTGRDKKKLIDTLDILIADAKGTRPYETYS 914 Query: 953 GGESFLVSLALALALSDLVS--HKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKT 1010 GGE+F V+ A+ LA++ L++ T + L +DEGFGT D + + A++A+ Sbjct: 915 GGEAFRVNFAIRLAIARLLALRSGTALQMLIVDEGFGTQDKAGCERLIAAIEAIAPDFAC 974 Query: 1011 IGVISHVEAMKERIPVQIKVKKINGLGYSKLE 1042 I I+H+ +E +I V K N + + Sbjct: 975 ILTITHMPHFREAFQTRIDVYKDNDGSHILIS 1006 >UniRef50_Q6IEE1 SbcC exonuclease n=7 Tax=Bacteria RepID=Q6IEE1_BRAJA Length = 1261 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 181/911 (19%), Positives = 321/911 (35%), Gaps = 51/911 (5%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+IL++R ++L SL ++ID EP A +GLFAITG TGAGK+T+LDA+CLALY E PR Sbjct: 1 MRILAIRGESLASLGAPFEIDLAAEPLAGSGLFAITGETGAGKSTILDALCLALYGEYPR 60 Query: 61 LSNVSQ--------------SQNDLMTRDTAECLAEVEFE-VKGEAYRAFWSQNRARNQP 105 +S + ++ R AEV+F GE YR W NRAR + Sbjct: 61 VSVGRRENAPDPSGEGISIHDGRAILRRGAGSGYAEVDFVGQDGERYRVRWEANRARGRA 120 Query: 106 DGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAK 165 +G LQ + L R DG +A E T L + +F R++LL+QG+F AFL A Sbjct: 121 NGRLQNEQRSLYRLDDGSAVATGKTQVREAVGRRTDLTFDQFRRTVLLAQGEFDAFLLAA 180 Query: 166 PKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASL 225 ERAELLE++TGTEIY IS V + + R +E+L+ + + LL E Q+L Sbjct: 181 ESERAELLEKITGTEIYAAISVRVHDGTDARRRSVEQLERRRDDIGLLDDEARQALLDEQ 240 Query: 226 QVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSL 285 L Q + Q + L+ R + + +R + A A E A + +L+ Sbjct: 241 SQLASTIAQKGAERDQHNERLDHFKRVAAARSDLARAEAQAVAAHAAREAAADEYQSLAE 300 Query: 286 AQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQ 345 LRP + A + +++ + + L + A + Sbjct: 301 LDLGEPLRPLAGDLQNARRTAAKAQTRLDGLLIAREEAQKLHSESTTQLADAVTANGAAE 360 Query: 346 QSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT 405 + L + + + + E A R T + L + QQ +K +ALA I T Sbjct: 361 EVLKNFGPLWNEAERLDAELAAAR------TGVNDTLEKSQQAEATLREKADALATIDET 414 Query: 406 LTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNE 465 L + + + A Q R V L ++ LA+ Q + A Sbjct: 415 L--GQTSESYRTTAAQLKSRSDRVLLADRLGDAMDLLAKRGALQQEHAAARVTAAGAEET 472 Query: 466 MRQRYKEKTQQLADVKTICEQE-ARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALE 524 E T L + E++ + + +RA L L + E Sbjct: 473 ATLSQNEITALLEKLTEDRERKDGLSREIGDRRASLAGIDEATLHERDVNLQRALEALRE 532 Query: 525 PGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQL-QRDENEAQSLRQDEQALTQQWQA 583 + ++ + E + Q+ + + ++ + + + A Sbjct: 533 ASTVCDQYTRASADLTRRESEHTLAAQAVSTAKSQIVEAEADQLRDRTARAEIVPIAELA 592 Query: 584 VTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQ 643 A + + + P L L+ L A ++ + + Sbjct: 593 DEAVSSEAIHLRSLLAPNLACPVCGSTDHPHLAHPSTLNEIAARLRRRREELDTALTATG 652 Query: 644 QLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRI------------ 691 Q L + ++ E + + + + E + N + Sbjct: 653 QRLDAATRALSAGEARQAETNRGIDVARGQVLAANSAFGEQWSSLNDLCTKAGIEGNAPP 712 Query: 692 ---QQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQ 748 Q L L L + R++ + +L + L + A+S+ Sbjct: 713 VLDDQAASKLAALISVAIAERSAIASPLASARRLRTEIDSLQRKHDALGEVIETTARSID 772 Query: 749 KAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLA 808 + ++ F A + + AA + E+ ++ + + + L Sbjct: 773 QRRSNFH---AAQLKATEYTVQAAGLAERLIS--------ISREITPFLAAAGLAVDHLD 821 Query: 809 QHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQ 868 + +++++ Q L+ + L+ L+ Sbjct: 822 VDPAGVSLTLSTVATEYAALREQVGQLEMTLQRLAPERAAADASLRHAQAQVTAAALLLD 881 Query: 869 QIAQMTQQVED 879 Q + Sbjct: 882 QRRLAEGEKAR 892 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 171/900 (19%), Positives = 314/900 (34%), Gaps = 54/900 (6%) Query: 187 AMVFEQHKSARTELEKLQAQASGVT---LLTPEQVQSLTASLQVLTDEEKQLITAQQQEQ 243 V + E E+L A+ + T E+ Q A+L+ D + Q Sbjct: 360 EEVLKNFGPLWNEAERLDAELAAARTGVNDTLEKSQQAEATLREKADALATIDETLGQTS 419 Query: 244 QSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHS 303 +S Q + + + L A+ K + A+ ++++ Sbjct: 420 ESYRTTAAQLKSRSDRVLLADRLGDAMDLLAKRGALQQEHAAARVTAAGAEETATLSQNE 479 Query: 304 --AALAHIRQQIEEVNTRLQSTMALRASI----RHHAAKQSAELQQQQQSLNTWLQEHDR 357 A L + + E + + RAS+ ++ LQ+ ++L D+ Sbjct: 480 ITALLEKLTEDRERKDGLSREIGDRRASLAGIDEATLHERDVNLQRALEALREASTVCDQ 539 Query: 358 FRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQ 417 + + + + ++ + + + + + A + + ++ Sbjct: 540 YTRASADLTRRESEHTLAAQAVSTAKSQIVEAEADQLRDRTARAEIVPIAELADEAVSSE 599 Query: 418 HAEQRPLRQ-------------------------------HLVALHGQIVPQQKRLAQLQ 446 R L L + +RL Sbjct: 600 AIHLRSLLAPNLACPVCGSTDHPHLAHPSTLNEIAARLRRRREELDTALTATGQRLDAAT 659 Query: 447 VAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPC 506 A+ Q + N ++ R + + + +E + Q Sbjct: 660 RALSAGEARQAETNRGIDVARGQVLAANSAFGEQWSSLNDLCTKAGIEGNAPPVLDDQAA 719 Query: 507 PLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENE 566 + A+ A+ + +R L E+ L + L ++ + + + + Sbjct: 720 SKLAALISVAIAERSAIASPLASAR--RLRTEIDSLQRKHDALGEVIETTARSIDQRRSN 777 Query: 567 AQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQ--LRLLSQRHELQGQ 624 + + T Q + L + + +H + + + Sbjct: 778 FHAAQLKATEYTVQAAGLAERLISISREITPFLAAAGLAVDHLDVDPAGVSLTLSTVATE 837 Query: 625 IAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNEL 684 AA +Q+ Q + +++ Q L R+ + + EL Sbjct: 838 YAALREQVGQLEMTLQRLAPERAAADASLRHAQAQVTAAALLLDQRRLAEGEKARARAEL 897 Query: 685 TALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAA 744 + + ++ + E A ++ A Sbjct: 898 LDGEAT----ASHRARITEACQTTREALARARETKSTTDAAFQAAGARCDEAAAGLETAK 953 Query: 745 QSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTA 804 A+ F+ A Q D L + ++ A T V Sbjct: 954 GRNALAEKAFNAACMDIARPPDQVAALIATDPALSGALRVRIREIDRGVNDAGTAVLTRQ 1013 Query: 805 ETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQ 864 L + + + T VE++ +A ++ + G + L +D + R+ Sbjct: 1014 NDLNRALEGFNE-----TTDVEELAAVVATLGTEIGDMQQLTGGLAATLARDDEARRAAA 1068 Query: 865 TLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLL 924 L QI ++ W ++ IGS GD+FR+F QG+TLD++V LAN L L RY L Sbjct: 1069 NLSAQIETAKAELVIWHAVDDAIGSASGDRFRRFVQGITLDHMVQLANDHLHALTPRYRL 1128 Query: 925 QRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDE 984 R A+ L + ++D D VR TR+LSGGE FLVSLALALALS L + +D+LF+DE Sbjct: 1129 ARGAASDLTLHIIDRDMGDEVRGTRSLSGGERFLVSLALALALSGLEGRSSFVDTLFIDE 1188 Query: 985 GFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLEST 1044 GFG+LD+ETLD A+DAL+ L G+ +GVI+HV AM ERI VQ++V+K G G S++ + Sbjct: 1189 GFGSLDAETLDLAVDALETLQGRGQKVGVITHVAAMIERIAVQVRVEK-RGAGRSEIRVS 1247 >UniRef50_Q2SNI5 ATPase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNI5_HAHCH Length = 1229 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 263/913 (28%), Positives = 411/913 (45%), Gaps = 30/913 (3%) Query: 1 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60 M+ILSLRLKNLNSLKGEWK+DF +PF SNGLFAITGPTGAGKTTLLDAICLALYH+TPR Sbjct: 1 MRILSLRLKNLNSLKGEWKVDFRADPFHSNGLFAITGPTGAGKTTLLDAICLALYHQTPR 60 Query: 61 LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120 + NVS + N++MTR TAECLAEVEFEVKGEAYRAFWSQ RARN +G Q P VELA A Sbjct: 61 I-NVSPTNNEIMTRHTAECLAEVEFEVKGEAYRAFWSQRRARNLAEGRFQPPHVELAT-A 118 Query: 121 DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180 DGKILADKVKDKL L A LTGLD+ RFT+SMLL+QG FAAFLNA ERAELLEELTGTE Sbjct: 119 DGKILADKVKDKLTLIAELTGLDFARFTKSMLLAQGGFAAFLNAPANERAELLEELTGTE 178 Query: 181 IYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQ 240 IYG+ISA VFE+ + A+ ELE+L+A+A G LL+ +++ + L +EK + Sbjct: 179 IYGKISARVFERQRDAKGELERLRAKAEGQDLLSDDELTAYYEESTALETQEKTEAERLE 238 Query: 241 QEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300 + WL R + QQ + L +A A E+ + L L+L++PA LRP ++ Sbjct: 239 SLRTQKQWLDRVTQAQQSFKEAELRLTEATARLEQEKTDLGRLALSEPAEKLRPFYKDYQ 298 Query: 301 EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQE-HDRFR 359 + A A + I+ + L+ A L Q Q ++ Sbjct: 299 QAHDAYAQTERHIKSLTESLELARVELERKSSELALAKKALMQLQTQREELESLVAEKVM 358 Query: 360 QWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLT--LTADEVATALAQ 417 + + QQ + + + + + E+ L+ A+E + Sbjct: 359 PLDQAIEQLNSLMGQQQETVAEVVRRRDESSEQEKALSVQLKALREEIQAANEYLESRRS 418 Query: 418 HAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477 H Q + L +L AI+ EQ ++ +++ E + L Sbjct: 419 HKLLPESLPLWRERLAQRTKARGELTKLAEAIKAREAEQRKQEVESGRLQEAQTEALKVL 478 Query: 478 ADVKTICE--QEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLAL 535 + + + Q+A + L + + S + A + G + L L Sbjct: 479 EEHRRVVADTQKAILGVLSGETDAELRECLASMQKSRTDRFRLGRLADDYGKRRQELAEL 538 Query: 536 ENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLN------ 589 + ++++ E A + L + KQ + ++ L + Q Q Sbjct: 539 KAQLQEREGELAQGKQSLLMMRKQYKAEKAHLDDLDRLMQKERQIASLSEHRSRLSPGEP 598 Query: 590 ---------------ITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQ 634 Q D + + + + + + +E ++++ + Sbjct: 599 CPLCGSHEHPGIAAYEAQQESDTEKRLQEKRKQLQELEEKGKKLNEAAARLSSELEIGAG 658 Query: 635 YQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL 694 + ++E+ L T ++ + Q+ + + AL R++ L Sbjct: 659 ARGKLEREMTALQAEWTQLCGEFGVNLVIDAPAGAQNAVDVYLQKEEAKENALAERVRSL 718 Query: 695 TPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQF 754 + L Q+ E E + E R++ Q L + + + Q A+ A + Sbjct: 719 EQTEKQLQQAKESATAAEQELGEILRKLELQQRDLQNLSKEINAQLTQQAEQ-SAALSAL 777 Query: 755 DTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHR 814 + + + A + L + + ++ + + V Q + L + +H Sbjct: 778 EQGVSEAFATLGYAMPRDEEQDAWLETRNAEAREYQARQEKLEQGVKQAGD-LERQLEHA 836 Query: 815 PDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMT 874 + + T++ +Q+ L QT L E + + + ++ Q+ L + T Sbjct: 837 AEKATEIAQTLKGLQENLTQTQAALAEKKAQRQALFGDKSPTEERKRMQEQLAAAEKRWT 896 Query: 875 QQVEDWGYLNSLI 887 ED ++ + Sbjct: 897 TLQEDKERADTAL 909 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 246/893 (27%), Positives = 379/893 (42%), Gaps = 28/893 (3%) Query: 179 TEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITA 238 + L++ Q + + E V + +++EK L Sbjct: 339 LMQLQTQREELESLVAEKVMPLDQAIEQLNSLMGQQQETVAEVVRRRDESSEQEKALSVQ 398 Query: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 + ++ + E ++ ++L + L+ A R +R Sbjct: 399 LKALREEIQAANEYLESRRSHKLLPESLPLWRERLAQRTKARGELTKLAEAIKAREAEQR 458 Query: 299 IAEHSA-ALAHIRQQIEEVNTRLQSTMALRASIR------HHAAKQSAELQQQQQSLNTW 351 E + L + + +V + +A A+ L Q+S Sbjct: 459 KQEVESGRLQEAQTEALKVLEEHRRVVADTQKAILGVLSGETDAELRECLASMQKSRTDR 518 Query: 352 LQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTL----- 406 + + +Q L Q +Q L ++ A A L Sbjct: 519 FRLGRLADDYGKRRQELAELKAQLQEREGELAQGKQSLLMMRKQYKAEKAHLDDLDRLMQ 578 Query: 407 TADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEM 466 ++A+ + P + + AQ + + QE+ ++ L E Sbjct: 579 KERQIASLSEHRSRLSPGEPCPLCGSHEHPGIAAYEAQQESDTEKRLQEKRKQLQELEEK 638 Query: 467 RQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPG 526 ++ E +L+ I E Q + Q C G A Sbjct: 639 GKKLNEAAARLSSELEIGAGARGKLEREMTALQAEWTQLCGEFGVNLVIDAPAGAQNAVD 698 Query: 527 VNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTA 586 V + A EN + + QL + E E + + + + Q ++ Sbjct: 699 VYLQKEEAKENALAERVRSLEQTEKQLQQAKESATAAEQELGEILRKLELQQRDLQNLSK 758 Query: 587 SLNITLQPLDDIQPWLDAQDEHERQLRLLS-----QRHELQGQIAAHNQQIIQYQQQIEQ 641 +N L + L A ++ + + E + N + +YQ + E+ Sbjct: 759 EINAQLTQQAEQSAALSALEQGVSEAFATLGYAMPRDEEQDAWLETRNAEAREYQARQEK 818 Query: 642 RQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQL------T 695 +Q + ++ T + ++ Q Q L + + Q L T Sbjct: 819 LEQGVKQAGDLERQLEHAAEKATEIAQTLKGLQENLTQTQAALAEKKAQRQALFGDKSPT 878 Query: 696 PILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFD 755 + + + T + E+ + +++ L+ Q L A+ + Sbjct: 879 EERKRMQEQLAAAEKRWTTLQEDKERADTALQQHLGREELLKTQLGSQRALLSDAERLWS 938 Query: 756 TALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP 815 AL AS F DQ AF AL++E+ L LKQ L+ Q+ +A TL + L + Sbjct: 939 EALAASRFADQTAFEQALLNEEERQALAVLKQELDQQKDRAATLKQRAEAELNELLATPA 998 Query: 816 DDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQ 875 ++ ++L L+ + QGEIRQ L+ D R +Q L+ I Q Sbjct: 999 TQLSEP-----ELAEQLQTVADGLKAVSQKQGEIRQLLQSDQTRRMSRQKLLVDIESQQQ 1053 Query: 876 QVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVE 935 + +DW YL+SLIG+ +G KFR++AQGLTLD+LV+LANQ L+RLHGRY L+R+ EALE++ Sbjct: 1054 RYDDWAYLSSLIGAADGAKFRRYAQGLTLDHLVYLANQHLSRLHGRYELERREGEALELQ 1113 Query: 936 VVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLD 995 VVDTWQAD VRDT+TLSGGESFLVSLALALALSDLVSHKT IDSLFLDEGFG LDSETL+ Sbjct: 1114 VVDTWQADTVRDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGALDSETLE 1173 Query: 996 TALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK 1048 ALDALD LNASGK IGVISHVEAMKERI VQIKVKK++GLG S+L++ + ++ Sbjct: 1174 VALDALDCLNASGKMIGVISHVEAMKERISVQIKVKKMSGLGVSRLDNRYCLE 1226 Score = 44.5 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 52/420 (12%), Positives = 118/420 (28%), Gaps = 12/420 (2%) Query: 516 AVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQ 575 A E + ++ + L Q ++E + ++ Sbjct: 165 NERAELLEELTGTEIYGKISARVFERQRDAKGELERLRAKAEGQDLLSDDELTAYYEEST 224 Query: 576 ALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAH--NQQII 633 AL Q + L + AQ + L++ Q + Sbjct: 225 ALETQEKTEAERLESLRTQKQWLDRVTQAQQSFKEAELRLTEATARLEQEKTDLGRLALS 284 Query: 634 QYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQ 693 + +++ + YA T L + E + ++Q Sbjct: 285 EPAEKLRPFYKDYQQAHDAYAQTERHIKSLTESLELARVELERKSSELALAKKALMQLQT 344 Query: 694 LTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQ 753 LE+L +P +E + Q ++ + + ++L Sbjct: 345 QREELESLVAEKVMP---LDQAIEQLNSLMGQQQETVAEVVRRRDESSEQEKALSVQLKA 401 Query: 754 FDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQH 813 +QA+ + L+ E E+L Q +A+ +T+ AE + + Sbjct: 402 LREEIQAANEYLESRRSHKLLPESLPLWRERLAQR-----TKARGELTKLAEAIKAREAE 456 Query: 814 RPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQM 873 + + E + L + R +Q I L + + + + + + Sbjct: 457 QRKQEVESGRLQEAQTEALKVLEEHRRVVADTQKAILGVLSG--ETDAELRECLASMQKS 514 Query: 874 TQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALE 933 G L G + + AQ + + Q L + +Y ++ + L+ Sbjct: 515 RTDRFRLGRLADDYGKRRQELAELKAQLQEREGELAQGKQSLLMMRKQYKAEKAHLDDLD 574 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.146 0.352 Lambda K H 0.267 0.0450 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,210,804,718 Number of Sequences: 3077464 Number of extensions: 195519853 Number of successful extensions: 2978923 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 30889 Number of HSP's successfully gapped in prelim test: 59932 Number of HSP's that attempted gapping in prelim test: 1669657 Number of HSP's gapped (non-prelim): 595760 length of query: 1048 length of database: 1,040,396,356 effective HSP length: 139 effective length of query: 909 effective length of database: 612,628,860 effective search space: 556879633740 effective search space used: 556879633740 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 99 (42.6 bits)