08/01/2012 04:55:20 : INFO  : Run start: Sun Jan  8 04:55:19 GMT 2012
08/01/2012 04:55:22 : INFO  : Initialised job
08/01/2012 04:55:23 : INFO  : Renaming log file 'phyre2_20120108_045519.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/886d99425902cec6/phyre_20120108_045519.log'
08/01/2012 04:55:24 : INFO  : Initialised job:
Sequence
>batch____
MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDEAQEEEGQVEAVMDAAL
RPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVV
TEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWYASIHE
TQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLIN
RIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIG
AGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK

08/01/2012 04:55:25 : INFO  : Checked sequence
08/01/2012 04:55:27 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 04:55:28 : INFO  : PSI-BLAST 3 iterations
08/01/2012 04:56:55 : INFO  : PSI-BLAST 5 iterations
08/01/2012 04:57:58 : INFO  : Finished PSI-BLAST
08/01/2012 04:57:59 : INFO  : Running Buildali to generate a3m file
08/01/2012 05:02:37 : INFO  : Converting to HMM
08/01/2012 05:02:38 : INFO  : Calibrating HMM
08/01/2012 05:02:52 : INFO  : Searching HMM database
08/01/2012 05:10:25 : INFO  : Finished buildali
08/01/2012 05:10:26 : INFO  : Predicting secondary structure
08/01/2012 05:10:29 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 05:10:29 : INFO  : Predicting Disordered regions
08/01/2012 05:10:30 : INFO  : Predicted Disorder (Disopred)
08/01/2012 05:10:31 : INFO  : Running memsat_svm check
08/01/2012 05:13:02 : INFO  : Running memsat_svm full
08/01/2012 05:14:48 : INFO  : Predicted Transmembrane (memsat_svm) ID '886d99425902cec6'
08/01/2012 05:14:49 : INFO  : Initialising fold library search
08/01/2012 05:14:51 : INFO  : Initialised search input
08/01/2012 05:14:53 : INFO  : Building Ensemble models
08/01/2012 05:14:55 : INFO  : Building hh.d1z9ha1.model.1.pdb
08/01/2012 05:15:07 : INFO  : Building d1z9ha1.1.pdb
08/01/2012 05:15:15 : INFO  : Building c3n8uB_.2.pdb
08/01/2012 05:15:24 : INFO  : Building d1tq4a_.3.pdb
08/01/2012 05:15:32 : INFO  : Building d1qs0a_.4.pdb
08/01/2012 05:15:41 : INFO  : Building d1wpga4.5.pdb
08/01/2012 05:15:55 : INFO  : Building d2id3a2.6.pdb
08/01/2012 05:16:03 : INFO  : Building d2fq4a2.7.pdb
08/01/2012 05:16:12 : INFO  : Building d2bfda1.8.pdb
08/01/2012 05:16:21 : INFO  : Building c3ku7B_.9.pdb
08/01/2012 05:16:30 : INFO  : Building c1mhsA_.10.pdb
08/01/2012 05:16:38 : INFO  : Building c2voyB_.11.pdb
08/01/2012 05:16:45 : INFO  : Building d1qhba_.12.pdb
08/01/2012 05:16:53 : INFO  : Building c3trbA_.13.pdb
08/01/2012 05:17:00 : INFO  : Building c2xykB_.14.pdb
08/01/2012 05:17:08 : INFO  : Building c2ebyA_.15.pdb
08/01/2012 05:17:15 : INFO  : Building d2icta1.16.pdb
08/01/2012 05:17:21 : INFO  : Building d2ap1a1.17.pdb
08/01/2012 05:17:29 : INFO  : Building c3fewX_.18.pdb
08/01/2012 05:17:36 : INFO  : Building c2rpaA_.19.pdb
08/01/2012 05:17:42 : INFO  : Building c1o8tA_.20.pdb
08/01/2012 05:17:57 : INFO  : Finished HH model building
08/01/2012 05:17:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 05:19:04 : INFO  : html domain output complete ID '886d99425902cec6'
08/01/2012 05:24:42 : INFO  : Run end  : Sun Jan  8 05:24:42 GMT 2012
