 |
| Job Description | P0AEH8 | | Confidence | 2.38% | Date | Thu Jan 5 11:23:22 GMT 2012 |
| Rank | 25 | Aligned Residues | 31 |
| % Identity | 16% | Template | c3h0dB_ |
| PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:ctsr; |
PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex
|
| Resolution | 2.40 Å |
|
|   |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | S | M | G | G | A | V | G | V | A | A | S | L | A | T | A | G | A | L | T | G | H | D | V | T | V | L | L | P | A | M |
| Query Conservation |   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
| Template Sequence |   |
I | S | Q | S | S | A | E | D | V | I | K | R | L | X | E | E | K | V | I | S | E | R | E | A | K | X | X | L | S | V | X |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|