BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (119 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=En... 243 2e-63 UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterob... 196 2e-49 UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Provide... 115 4e-25 UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudom... 89 4e-17 UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudom... 71 1e-11 UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudom... 42 0.006 UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudom... 39 0.047 >UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=Enterobacteriaceae RepID=YDAY_ECOLI Length = 119 Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK Sbjct: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP Sbjct: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 >UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=A8AHL9_CITK8 Length = 167 Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 93/116 (80%), Positives = 101/116 (87%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWK 63 S DNDQYRSRNALIRRHIEKMDAS VGT EF +S V E+DS DDLLIDN ARYLLKDWK Sbjct: 46 SIDNDQYRSRNALIRRHIEKMDASYQVGTSEFSLSAVGEIDSADDLLIDNCARYLLKDWK 105 Query: 64 GVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 GVGELV+G EV +EYT ERG AL+KQ P +YWQILAEAASIAQGKEQQKQ+T+KKP Sbjct: 106 GVGELVDGEEVPIEYTPERGAALMKQEPAIYWQILAEAASIAQGKEQQKQETVKKP 161 >UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q679_PROST Length = 144 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWK 63 S+++ +Y+S +A RHIE++D+ + VGT +FDISKV +D+LL+ A+YLLKDW+ Sbjct: 28 SANDSRYQSVSATAYRHIERLDSKMKVGTSDFDISKVDTSQPLDELLMFTVAQYLLKDWQ 87 Query: 64 GVGEL-VNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 GVGEL G +VA+EYT ERG LLKQ P++YW+++ A +++ + +Q +TIKK Sbjct: 88 GVGELNAKGEQVAIEYTPERGTRLLKQCPDIYWKVIDAAVELSKEESEQIDETIKK 143 >UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L750_PSEAE Length = 162 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 75/118 (63%), Gaps = 5/118 (4%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEV--DSVDDLLIDNAARYLLKD 61 S+ + ++S +A+I RH++ +DA VGT +F +++V D++DDLLI AR+++KD Sbjct: 46 STGDPLFQSHHAMINRHMQAIDAQAGVGTSQFSPLTLADVQFDNIDDLLIGLVARHIIKD 105 Query: 62 WKGV-GELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 WKGV E GV +YT ERG AL++Q+P+ YW L A IA + + Q+T+ K Sbjct: 106 WKGVQDEAAPGVPA--DYTPERGQALMRQHPDAYWLALKTGADIAVRADLRTQETVGK 161 >UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5T5_PSEP1 Length = 161 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVS--EVDSVDDLLIDNAARYLLKD 61 S N Y+S A+IRRH+ ++ VGT F I + E+++ DDL ID A ++L+KD Sbjct: 45 SIANPIYKSHQAVIRRHLAALNQQAGVGTAGFTIDAIPDVELETDDDLFIDLATKHLIKD 104 Query: 62 WKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 W+G+ E A +YT + AL++Q P +Y+ L A IA+ E+Q Q T +K Sbjct: 105 WQGIDVEERPGEPA-KYTPQLCKALIEQMPSVYFLALRTALDIAKRIEEQAQATAEK 160 >UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q884K3_PSESM Length = 131 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 11/120 (9%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVS--EVDSVDDLLIDNAARYL 58 M S D+ +Y+ +RR +++ DA G DI ++ + + + L A +L Sbjct: 1 MLVSLDSTEYQIAMERMRRRVQRNDAQFQEG----DIGVIAGEKTEYANHCLA--IASFL 54 Query: 59 LKDWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 LKDW G V+G ++YT + G +L+ N EL+ +L + +A K+ ++ +T++K Sbjct: 55 LKDWTGA---VDGDGNEIKYTEQVGAQMLEDNVELFLFVLEHSGDLAASKKVEQVETLEK 111 >UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q87XX5_PSESM Length = 132 Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 7/114 (6%) Query: 6 DNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKGV 65 D+ +Y+ ++R I + DA G+ +VSE + +L A+Y++KDW+G Sbjct: 7 DSPEYQVAIERMQRRIWRNDAVFAEGSVGVLEGEVSEKRNHCMVL----AKYIVKDWQGA 62 Query: 66 GELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 + AL Y G+++L+ + E + ++ A S A+ ++++++T++KP Sbjct: 63 QDHDGN---ALPYDEAIGVSMLESDLEFFLFVIRSAESFAKQVQEERKETLEKP 113 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterob... 184 6e-46 UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=En... 180 1e-44 UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Provide... 160 1e-38 UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudom... 157 8e-38 UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudom... 157 8e-38 Sequences not found previously or not previously below threshold: UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudom... 49 4e-05 UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudom... 47 2e-04 UniRef50_B0VNQ4 Putative uncharacterized protein n=13 Tax=Acinet... 43 0.003 >UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=A8AHL9_CITK8 Length = 167 Score = 184 bits (468), Expect = 6e-46, Method: Composition-based stats. Identities = 93/116 (80%), Positives = 101/116 (87%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWK 63 S DNDQYRSRNALIRRHIEKMDAS VGT EF +S V E+DS DDLLIDN ARYLLKDWK Sbjct: 46 SIDNDQYRSRNALIRRHIEKMDASYQVGTSEFSLSAVGEIDSADDLLIDNCARYLLKDWK 105 Query: 64 GVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 GVGELV+G EV +EYT ERG AL+KQ P +YWQILAEAASIAQGKEQQKQ+T+KKP Sbjct: 106 GVGELVDGEEVPIEYTPERGAALMKQEPAIYWQILAEAASIAQGKEQQKQETVKKP 161 >UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=Enterobacteriaceae RepID=YDAY_ECOLI Length = 119 Score = 180 bits (456), Expect = 1e-44, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK Sbjct: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP Sbjct: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 >UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q679_PROST Length = 144 Score = 160 bits (404), Expect = 1e-38, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWK 63 S+++ +Y+S +A RHIE++D+ + VGT +FDISKV +D+LL+ A+YLLKDW+ Sbjct: 28 SANDSRYQSVSATAYRHIERLDSKMKVGTSDFDISKVDTSQPLDELLMFTVAQYLLKDWQ 87 Query: 64 GVGEL-VNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 GVGEL G +VA+EYT ERG LLKQ P++YW+++ A +++ + +Q +TIKK Sbjct: 88 GVGELNAKGEQVAIEYTPERGTRLLKQCPDIYWKVIDAAVELSKEESEQIDETIKK 143 >UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5T5_PSEP1 Length = 161 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVS--EVDSVDDLLIDNAARYLLKD 61 S N Y+S A+IRRH+ ++ VGT F I + E+++ DDL ID A ++L+KD Sbjct: 45 SIANPIYKSHQAVIRRHLAALNQQAGVGTAGFTIDAIPDVELETDDDLFIDLATKHLIKD 104 Query: 62 WKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 W+G+ E A +YT + AL++Q P +Y+ L A IA+ E+Q Q T +K Sbjct: 105 WQGIDVEERPGEPA-KYTPQLCKALIEQMPSVYFLALRTALDIAKRIEEQAQATAEK 160 >UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L750_PSEAE Length = 162 Score = 157 bits (397), Expect = 8e-38, Method: Composition-based stats. Identities = 48/118 (40%), Positives = 75/118 (63%), Gaps = 5/118 (4%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEV--DSVDDLLIDNAARYLLKD 61 S+ + ++S +A+I RH++ +DA VGT +F +++V D++DDLLI AR+++KD Sbjct: 46 STGDPLFQSHHAMINRHMQAIDAQAGVGTSQFSPLTLADVQFDNIDDLLIGLVARHIIKD 105 Query: 62 WKGV-GELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 WKGV E GV +YT ERG AL++Q+P+ YW L A IA + + Q+T+ K Sbjct: 106 WKGVQDEAAPGVPA--DYTPERGQALMRQHPDAYWLALKTGADIAVRADLRTQETVGK 161 >UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q884K3_PSESM Length = 131 Score = 49.0 bits (115), Expect = 4e-05, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 7/118 (5%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 M S D+ +Y+ +RR +++ DA G + + + + + L A +LLK Sbjct: 1 MLVSLDSTEYQIAMERMRRRVQRNDAQFQEG--DIGVIAGEKTEYANHCL--AIASFLLK 56 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 DW G V+G ++YT + G +L+ N EL+ +L + +A K+ ++ +T++K Sbjct: 57 DWTG---AVDGDGNEIKYTEQVGAQMLEDNVELFLFVLEHSGDLAASKKVEQVETLEK 111 >UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q87XX5_PSESM Length = 132 Score = 47.1 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Query: 5 SDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKG 64 D+ +Y+ ++R I + DA G+ +VSE + +L A+Y++KDW+G Sbjct: 6 VDSPEYQVAIERMQRRIWRNDAVFAEGSVGVLEGEVSEKRNHCMVL----AKYIVKDWQG 61 Query: 65 VGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 + AL Y G+++L+ + E + ++ A S A+ ++++++T++KP Sbjct: 62 ---AQDHDGNALPYDEAIGVSMLESDLEFFLFVIRSAESFAKQVQEERKETLEKP 113 >UniRef50_B0VNQ4 Putative uncharacterized protein n=13 Tax=Acinetobacter RepID=B0VNQ4_ACIBS Length = 186 Score = 43.2 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 13/114 (11%) Query: 10 YRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSV-DDLLIDNAARYLLKDWKGV--G 66 Y+ I R A + +K +D+ E + +LL+D A +L++DWKGV Sbjct: 52 YKPFQVAIER------AGNQISSKGYDVMVKDEDAKLYHELLMDACAAHLIEDWKGVVFA 105 Query: 67 ELVNGVEVALE--YTAERGIALLK--QNPELYWQILAEAASIAQGKEQQKQDTI 116 E+V+G V E YT E LL W + E A Q + + I Sbjct: 106 EVVDGKTVESEKPYTPESASKLLNLGDIGISIWLFIKEQAQKIQEDADKDKALI 159 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterob... 170 9e-42 UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=En... 163 1e-39 UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Provide... 144 6e-34 UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudom... 144 6e-34 UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudom... 143 2e-33 UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudom... 130 1e-29 UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudom... 126 2e-28 Sequences not found previously or not previously below threshold: UniRef50_B0VNQ4 Putative uncharacterized protein n=13 Tax=Acinet... 44 0.002 >UniRef50_A8AHL9 Putative uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=A8AHL9_CITK8 Length = 167 Score = 170 bits (431), Expect = 9e-42, Method: Composition-based stats. Identities = 93/119 (78%), Positives = 102/119 (85%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 + S DNDQYRSRNALIRRHIEKMDAS VGT EF +S V E+DS DDLLIDN ARYLLK Sbjct: 43 LVSSIDNDQYRSRNALIRRHIEKMDASYQVGTSEFSLSAVGEIDSADDLLIDNCARYLLK 102 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 DWKGVGELV+G EV +EYT ERG AL+KQ P +YWQILAEAASIAQGKEQQKQ+T+KKP Sbjct: 103 DWKGVGELVDGEEVPIEYTPERGAALMKQEPAIYWQILAEAASIAQGKEQQKQETVKKP 161 >UniRef50_P76069 Putative uncharacterized protein ydaY n=6 Tax=Enterobacteriaceae RepID=YDAY_ECOLI Length = 119 Score = 163 bits (413), Expect = 1e-39, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK Sbjct: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP Sbjct: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 >UniRef50_B2Q679 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q679_PROST Length = 144 Score = 144 bits (364), Expect = 6e-34, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 4 SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWK 63 S+++ +Y+S +A RHIE++D+ + VGT +FDISKV +D+LL+ A+YLLKDW+ Sbjct: 28 SANDSRYQSVSATAYRHIERLDSKMKVGTSDFDISKVDTSQPLDELLMFTVAQYLLKDWQ 87 Query: 64 GVGEL-VNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 GVGEL G +VA+EYT ERG LLKQ P++YW+++ A +++ + +Q +TIKK Sbjct: 88 GVGELNAKGEQVAIEYTPERGTRLLKQCPDIYWKVIDAAVELSKEESEQIDETIKK 143 >UniRef50_A5W5T5 Putative uncharacterized protein n=1 Tax=Pseudomonas putida F1 RepID=A5W5T5_PSEP1 Length = 161 Score = 144 bits (364), Expect = 6e-34, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 3/120 (2%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVS--EVDSVDDLLIDNAARYL 58 + S N Y+S A+IRRH+ ++ VGT F I + E+++ DDL ID A ++L Sbjct: 42 LVASIANPIYKSHQAVIRRHLAALNQQAGVGTAGFTIDAIPDVELETDDDLFIDLATKHL 101 Query: 59 LKDWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 +KDW+G+ E A +YT + AL++Q P +Y+ L A IA+ E+Q Q T +K Sbjct: 102 IKDWQGIDVEERPGEPA-KYTPQLCKALIEQMPSVYFLALRTALDIAKRIEEQAQATAEK 160 >UniRef50_A3L750 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L750_PSEAE Length = 162 Score = 143 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 5/121 (4%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEV--DSVDDLLIDNAARYL 58 + S+ + ++S +A+I RH++ +DA VGT +F +++V D++DDLLI AR++ Sbjct: 43 LVASTGDPLFQSHHAMINRHMQAIDAQAGVGTSQFSPLTLADVQFDNIDDLLIGLVARHI 102 Query: 59 LKDWKGV-GELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIK 117 +KDWKGV E GV +YT ERG AL++Q+P+ YW L A IA + + Q+T+ Sbjct: 103 IKDWKGVQDEAAPGVPA--DYTPERGQALMRQHPDAYWLALKTGADIAVRADLRTQETVG 160 Query: 118 K 118 K Sbjct: 161 K 161 >UniRef50_Q87XX5 Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q87XX5_PSESM Length = 132 Score = 130 bits (326), Expect = 1e-29, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 7/119 (5%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 + D+ +Y+ ++R I + DA G+ +VSE + +L A+Y++K Sbjct: 2 LIAPVDSPEYQVAIERMQRRIWRNDAVFAEGSVGVLEGEVSEKRNHCMVL----AKYIVK 57 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP 119 DW+G + AL Y G+++L+ + E + ++ A S A+ ++++++T++KP Sbjct: 58 DWQG---AQDHDGNALPYDEAIGVSMLESDLEFFLFVIRSAESFAKQVQEERKETLEKP 113 >UniRef50_Q884K3 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q884K3_PSESM Length = 131 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 7/118 (5%) Query: 1 MSRSSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLK 60 M S D+ +Y+ +RR +++ DA G + + + + + L A +LLK Sbjct: 1 MLVSLDSTEYQIAMERMRRRVQRNDAQFQEG--DIGVIAGEKTEYANHCL--AIASFLLK 56 Query: 61 DWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKK 118 DW G V+G ++YT + G +L+ N EL+ +L + +A K+ ++ +T++K Sbjct: 57 DWTG---AVDGDGNEIKYTEQVGAQMLEDNVELFLFVLEHSGDLAASKKVEQVETLEK 111 >UniRef50_B0VNQ4 Putative uncharacterized protein n=13 Tax=Acinetobacter RepID=B0VNQ4_ACIBS Length = 186 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%) Query: 29 HVGTKEFDI-SKVSEVDSVDDLLIDNAARYLLKDWKGV--GELVNG--VEVALEYTAERG 83 + +K +D+ K + +LL+D A +L++DWKGV E+V+G VE YT E Sbjct: 65 QISSKGYDVMVKDEDAKLYHELLMDACAAHLIEDWKGVVFAEVVDGKTVESEKPYTPESA 124 Query: 84 IALL---KQNPELYWQILAEAASIAQGKEQQK 112 LL ++ I +A I + ++ K Sbjct: 125 SKLLNLGDIGISIWLFIKEQAQKIQEDADKDK 156 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.304 0.122 0.301 Lambda K H 0.267 0.0378 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 494,232,806 Number of Sequences: 3077464 Number of extensions: 14073036 Number of successful extensions: 34803 Number of sequences better than 1.0e-01: 8 Number of HSP's better than 0.1 without gapping: 16 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 34768 Number of HSP's gapped (non-prelim): 23 length of query: 119 length of database: 1,040,396,356 effective HSP length: 86 effective length of query: 33 effective length of database: 775,734,452 effective search space: 25599236916 effective search space used: 25599236916 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 87 (38.2 bits)