BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (468 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Ent... 905 0.0 UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Ent... 430 e-119 UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Ent... 383 e-105 UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 T... 369 e-100 UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yers... 352 2e-95 UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Ente... 344 4e-93 UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=... 342 2e-92 UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 T... 328 3e-88 UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 T... 312 2e-83 UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pect... 306 7e-82 UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax... 301 4e-80 UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Ent... 292 1e-77 UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:... 292 2e-77 UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 T... 283 1e-74 UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 T... 282 2e-74 UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax... 278 4e-73 UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax... 275 3e-72 UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Prov... 265 3e-69 UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 T... 249 2e-64 UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax... 246 1e-63 UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarc... 242 2e-62 UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bord... 242 2e-62 UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 T... 238 3e-61 UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 T... 236 1e-60 UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=A... 226 1e-57 UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID... 221 6e-56 UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus... 217 6e-55 UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thio... 216 1e-54 UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Jant... 214 5e-54 UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Fila... 212 2e-53 UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thio... 211 4e-53 UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 T... 201 4e-50 UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 T... 200 1e-49 UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma p... 199 2e-49 UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:... 198 4e-49 UniRef50_UPI0001914446 flagellar capping protein n=1 Tax=Salmone... 197 6e-49 UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 193 1e-47 UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 T... 191 6e-47 UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 T... 189 3e-46 UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 185 3e-45 UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 T... 185 3e-45 UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 T... 185 4e-45 UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax... 183 1e-44 UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 T... 181 4e-44 UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betapro... 176 2e-42 UniRef50_C5A8U2 FliD n=2 Tax=Burkholderia glumae RepID=C5A8U2_BURGB 174 4e-42 UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2... 174 9e-42 UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejue... 173 1e-41 UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 T... 172 2e-41 UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 T... 172 3e-41 UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Rein... 171 4e-41 UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing pr... 169 1e-40 UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 T... 169 2e-40 UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 ... 168 3e-40 UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 T... 168 3e-40 UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 T... 168 3e-40 UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomon... 166 1e-39 UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium pe... 164 5e-39 UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carb... 163 1e-38 UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 T... 160 8e-38 UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 T... 160 1e-37 UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=mari... 159 2e-37 UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 T... 159 2e-37 UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 T... 159 3e-37 UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 T... 157 8e-37 UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament ca... 157 8e-37 UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=A... 156 2e-36 UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax... 154 5e-36 UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella mar... 154 5e-36 UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 T... 154 6e-36 UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Fi... 154 9e-36 UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=P... 153 1e-35 UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax... 152 2e-35 UniRef50_A4G682 Putative flagellar hook-associated protein 2 Fli... 151 4e-35 UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax... 151 6e-35 UniRef50_Q5ZVV2 Flagellar hook associated protein 2 FliD n=5 Tax... 150 9e-35 UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curviba... 150 1e-34 UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas p... 149 2e-34 UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 T... 149 2e-34 UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphi... 148 5e-34 UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=G... 147 6e-34 UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 T... 147 1e-33 UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alte... 145 3e-33 UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax... 144 5e-33 UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseu... 144 5e-33 UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aero... 143 1e-32 UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax... 142 2e-32 UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 ... 141 4e-32 UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 T... 141 6e-32 UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbio... 140 1e-31 UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 T... 139 3e-31 UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 T... 139 3e-31 UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas s... 138 4e-31 UniRef50_A6F9P0 Flagellar distal capping protein-like protein La... 138 6e-31 UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax... 137 7e-31 UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paen... 136 1e-30 UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 T... 136 2e-30 UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alterom... 135 3e-30 UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=A... 135 3e-30 UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax... 135 3e-30 UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfu... 131 5e-29 UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 T... 130 7e-29 UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 T... 129 2e-28 UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 ... 128 4e-28 UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacteri... 128 4e-28 UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 T... 126 2e-27 UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadale... 126 2e-27 UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 125 3e-27 UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (Fli... 124 1e-26 UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1... 123 1e-26 UniRef50_B0RKG7 Flagellar hook-associated protein 2 n=1 Tax=Herb... 123 2e-26 UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n... 122 3e-26 UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein,... 121 5e-26 UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 T... 121 5e-26 UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnob... 121 7e-26 UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp... 121 7e-26 UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterob... 120 9e-26 UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UU... 120 1e-25 UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodofe... 120 1e-25 UniRef50_B7DR51 Flagellar hook-associated 2 domain protein n=1 T... 120 1e-25 UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 T... 120 1e-25 UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17... 120 2e-25 UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Entero... 119 2e-25 UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactob... 119 2e-25 UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 T... 119 2e-25 UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herb... 118 4e-25 UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=P... 118 4e-25 UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gamm... 118 5e-25 UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD... 117 7e-25 UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cell... 117 8e-25 UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 T... 116 2e-24 UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 T... 116 2e-24 UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagell... 116 2e-24 UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacteri... 115 2e-24 UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina Rep... 115 3e-24 UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanth... 114 6e-24 UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candida... 113 1e-23 UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia ... 113 2e-23 UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei g... 112 4e-23 UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax... 111 7e-23 UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 T... 110 1e-22 UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 T... 110 1e-22 UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 T... 109 3e-22 UniRef50_A8ERB3 Flagellar hook-associated protein 2 n=1 Tax=Arco... 108 3e-22 UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. ... 108 4e-22 UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=G... 107 1e-21 UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum ... 107 1e-21 UniRef50_C0QA29 FliD n=1 Tax=Desulfobacterium autotrophicum HRM2... 105 4e-21 UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 T... 103 2e-20 UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein... 103 2e-20 UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 T... 102 3e-20 UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdello... 102 3e-20 UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersin... 102 4e-20 UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseu... 102 4e-20 UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 T... 101 5e-20 UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 T... 101 6e-20 UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photoba... 101 6e-20 UniRef50_A0LT48 Flagellar hook-associated 2 domain protein n=1 T... 100 9e-20 UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=C... 100 2e-19 UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=g... 100 2e-19 UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=... 99 2e-19 UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 T... 99 2e-19 UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=u... 99 3e-19 UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax... 99 3e-19 UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorell... 99 3e-19 UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protei... 99 5e-19 UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Cam... 98 6e-19 UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata... 98 7e-19 UniRef50_D0XTV9 Flagellar hook-associated 2 domain protein n=1 T... 98 7e-19 UniRef50_D1B250 Flagellar hook-associated 2 domain protein n=1 T... 97 2e-18 UniRef50_D1U369 Flagellar hook-associated 2 domain protein n=1 T... 96 2e-18 UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD... 96 3e-18 UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Ca... 96 3e-18 UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 T... 96 4e-18 UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkhol... 96 4e-18 UniRef50_A5V2R8 Flagellar hook-associated 2 domain protein n=1 T... 96 4e-18 UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n... 95 4e-18 UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 T... 94 8e-18 UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 T... 94 9e-18 UniRef50_A4U4K6 Flagellar hook-associated protein 2 (FliD, filam... 94 1e-17 UniRef50_B8DS30 Flagellar hook-associated protein 2 domain prote... 93 2e-17 UniRef50_Q5E3P1 Flagellar hook-associated protein 2, FliD n=4 Ta... 93 2e-17 UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax... 93 2e-17 UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacil... 93 3e-17 UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 T... 92 4e-17 UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=V... 92 4e-17 UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 T... 92 6e-17 UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 T... 91 8e-17 UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 T... 91 8e-17 UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 T... 90 2e-16 UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 T... 89 2e-16 UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Liste... 89 3e-16 UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 T... 89 4e-16 UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brev... 89 5e-16 UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Baci... 88 6e-16 UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=B... 88 6e-16 UniRef50_A6DX67 Possible flagellar hook-associated protein 2 (Fi... 88 6e-16 UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=H... 87 9e-16 UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Baci... 87 2e-15 UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromo... 86 2e-15 UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 T... 86 2e-15 UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain prote... 86 2e-15 UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 T... 86 3e-15 UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 T... 85 5e-15 UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=B... 85 6e-15 UniRef50_A6W191 Flagellar hook-associated 2 domain protein n=1 T... 85 7e-15 UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 T... 84 8e-15 UniRef50_C1F8I7 Flagellar hook-associated protein 2 n=1 Tax=Acid... 84 9e-15 UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 Fli... 83 2e-14 UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 T... 83 2e-14 UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=... 83 2e-14 UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=V... 82 5e-14 UniRef50_C7M1N5 Flagellar hook-associated 2 domain protein n=1 T... 81 8e-14 UniRef50_A6C894 Probable lateral flagellar hook-associated prote... 81 1e-13 UniRef50_C8PMN7 Flagellar hook-associated protein FliD n=1 Tax=T... 81 1e-13 UniRef50_B0MP31 Putative uncharacterized protein n=1 Tax=Eubacte... 80 1e-13 UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 T... 80 2e-13 UniRef50_Q7NRQ1 Probable flagellar protein n=1 Tax=Chromobacteri... 80 2e-13 UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 T... 79 2e-13 UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerot... 79 3e-13 UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 T... 79 3e-13 UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax... 79 4e-13 UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Trep... 79 5e-13 UniRef50_C1TL61 Flagellar capping protein n=1 Tax=Dethiosulfovib... 78 8e-13 UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 T... 77 9e-13 UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 T... 77 1e-12 UniRef50_C6BZV2 Flagellar hook-associated 2 domain protein n=1 T... 77 1e-12 UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 T... 77 2e-12 UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter k... 77 2e-12 UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 T... 76 2e-12 UniRef50_B3QDF4 Flagellar hook-associated 2 domain protein n=9 T... 76 2e-12 UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Ocea... 76 3e-12 UniRef50_Q7MAM3 FLAGELLAR HOOK-ASSOCIATED PROTEIN 2 n=1 Tax=Woli... 75 4e-12 UniRef50_UPI0001C3576C flagellar capping protein n=1 Tax=Clostri... 75 6e-12 UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 T... 75 7e-12 UniRef50_A6CX94 Flagellar capping protein n=1 Tax=Vibrio shiloni... 74 1e-11 UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 T... 74 1e-11 UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=... 73 3e-11 UniRef50_B5YGA9 Flagellar hook-associated protein 2 n=1 Tax=Ther... 72 4e-11 UniRef50_B9KJE9 Flagellar hook-associated 2 domain protein n=4 T... 72 4e-11 UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillu... 72 5e-11 UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 T... 72 6e-11 UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Ca... 71 8e-11 UniRef50_B9L8E7 Flagellar hook-associated protein 2 n=2 Tax=Naut... 71 9e-11 UniRef50_A0RM69 Flagellar hook-associated protein n=3 Tax=Campyl... 71 1e-10 UniRef50_B8FJS1 Flagellar hook-associated 2 domain protein n=1 T... 71 1e-10 UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=... 70 2e-10 UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paeniba... 70 2e-10 UniRef50_B0TE02 Flagellar hook-associated protein 2, putative n=... 70 2e-10 UniRef50_Q0B0F5 Flagellar capping protein-like protein n=1 Tax=S... 69 3e-10 >UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Enterobacteriaceae RepID=FLID_ECOLI Length = 468 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/468 (100%), Positives = 468/468 (100%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA Sbjct: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA Sbjct: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV Sbjct: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT Sbjct: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA Sbjct: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD Sbjct: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK Sbjct: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK Sbjct: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 >UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Enterobacteriaceae RepID=FLID_SALTY Length = 467 Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust. Identities = 239/464 (51%), Positives = 327/464 (70%), Gaps = 6/464 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS L L +L LT +K LTPI+ QQS+ +AKL+AYGTLKSAL FQTA Sbjct: 1 MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTAL+KADLF +T +S+T +T A AG Y I+VT LA AQ+L T+TT TK Sbjct: 61 NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKINVTQLAAAQSLATKTTFATTKEQ 120 Query: 121 I---ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + + + I+Q G K+P+ I + ++S+ IRDAIN+A +G++ASI+ V E++ Sbjct: 121 LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +T+N +G DN M ++V GD L + YD++ ++ M+ V A+NA+L VN + IE Sbjct: 181 LVLTAN-SGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQ 239 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 SNT++DA + ITL L T + T+T+T+D +KA+ AIK WV+AYNSL+DTFSSLTKYTA Sbjct: 240 SNTVTDAPQGITLTLTKKVT-DATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTA 298 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 V+ G ++ S NGALLGDS +RTIQT +++ +N+ S+S++KT+A+IGIT D + GKL++ Sbjct: 299 VEPGEEA-SDKNGALLGDSVVRTIQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKI 357 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D DKLT LK + + L+VGDGK+TGITT I + + S+L+ GII A D V+ TL Sbjct: 358 DDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADDGIIDNAQDNVNATLKS 417 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 LTK Y + S+ ID VARYK QFTQLD +M+ LN+TSSYLTQQF Sbjct: 418 LTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQF 461 >UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Enterobacteriaceae RepID=A7FJ24_YERP3 Length = 466 Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust. Identities = 230/469 (49%), Positives = 318/469 (67%), Gaps = 11/469 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASIS+LG GSG+DL+++L L+AA++ LTP++ QQ+S+ KL+AYG L+SAL +TA Sbjct: 1 MASISALGTGSGMDLNTLLSQLSAAEQTRLTPLTTQQTSYKGKLTAYGVLQSALAKLETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +TAL KAD ++T+ + S +AFSATT A AG Y+I VT+LA+AQ+L + T Sbjct: 61 STALKKADTLNSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATD-K 119 Query: 121 IATSDS--KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 + +SD+ +TI Q G K+P+ I +++ +SL+GIRDAIN + V+ASI+ + Y L Sbjct: 120 LGSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVNASIMKADDNTYYL 179 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS--SNGMEVSVAAQNAQLTVNNVAIEN 236 ++TS DTG + MT+SV+GD+ L +F+ Y S++ S + V A++A L+VN V+I Sbjct: 180 ALTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITR 239 Query: 237 SSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SNTI+DA + +T+NL VT + LTI +D + + AI+ +V+AYNSL TF SLTK Sbjct: 240 QSNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTK 299 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 YT V+ G D QS+SNGAL+GD TLR+IQTQLKS L+++ S KTLA IGIT D DGK Sbjct: 300 YTVVETGQD-QSTSNGALVGDGTLRSIQTQLKSQLASS-QSGDLKTLASIGITQDL-DGK 356 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGVSK 413 L +DADKL AL + V A VGDG+ TG T L + L TT G +K ATDG++ Sbjct: 357 LVIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALDTTLGTLKTATDGINT 416 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 +L L K A + I+ + RYK QFTQLD LMTS+NST+S+LTQQFE Sbjct: 417 SLKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFE 465 >UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 Tax=Edwardsiella tarda RepID=D0Z9J1_EDWTE Length = 471 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 210/473 (44%), Positives = 296/473 (62%), Gaps = 7/473 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L LT +K LTP + QQSS+ AKL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKLTGVEKQRLTPYTTQQSSYKAKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT---TRDDT 117 + L+K D F+ T SS FS TT+ +A+ G Y I+VT LAQAQ+LT +T ++ D Sbjct: 61 SKDLAKTDAFTITKA-SSHDQFSVTTSASAVPGNYAINVTQLAQAQSLTAKTHATSQTDQ 119 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + S +LTI G I +S +SL+G+RDAIN + AGV AS+I + + EY Sbjct: 120 LGSAGASGRELTITVGEPPKETKISLSDEQTSLTGLRDAINKSNAGVKASVIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS--NGMEVSVAAQNAQLTVNNVAIE 235 LSVT+ DTG + + ++VSGD L + YD S NGM +V ++A++T+N + I Sbjct: 180 LSVTAADTGAKSNIKMNVSGDSKLAGMLNYDGHKDSAANGMAQTVEGRDAKMTLNGIDIT 239 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSN I+DA + +TL L VT Q L I+ D+ I DWV++YNSLIDTF+SLTK+ Sbjct: 240 RSSNKITDAPQGVTLELKAVTKDTQNLVISSDSEGVSKKIHDWVDSYNSLIDTFASLTKF 299 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 T V G ++++ +NG LLGD+TLR IQ+ +K ++S+ + + K L +GI+TDP GKL Sbjct: 300 TPVKKG-EAENFTNGPLLGDNTLRAIQSGVKGVMSSAQDNPNLKGLGNLGISTDPQTGKL 358 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +D KL A+ + V VG+GK TG+ + S + S++ G+I + T ++ +L Sbjct: 359 NIDDSKLKKAIDEYPGQVQNFFVGNGKDTGMANMVHSEIQSYIKNDGVIDSTTKSINNSL 418 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 L+ ++ + ID + RYK QF QLD +M LN TSSYLTQQF SNSK Sbjct: 419 QHLSDRIDSVNQSIDETINRYKAQFVQLDKMMAKLNGTSSYLTQQFNAMSNSK 471 >UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yersinia RepID=C4UKG1_YERRU Length = 469 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 220/472 (46%), Positives = 304/472 (64%), Gaps = 13/472 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSGL LS +LD+L++A++ L P++ QQ+S+ KL+A+G L+SAL +TA Sbjct: 1 MASISSLGAGSGLQLSELLDNLSSAEQKKLVPLTQQQTSYKGKLTAFGVLQSALAKVETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL KA+ + TS +SS TAFSATT A AG Y+I+V LAQ+Q+L + + T Sbjct: 61 AAALKKANTINGTSVSSSNTAFSATTDSAASAGSYSITVEQLAQSQSLLSAKMPNATDKL 120 Query: 121 IATSDSK-LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++S+ LTI Q G K P+ + ++ +SL+ IRDAIN + V+ASI+ + Y LS Sbjct: 121 GNDNESRTLTITQPGQKKPMEVVLTKDQTSLTDIRDAINKKEGNVTASIMKGDDNSYYLS 180 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS------SNGMEVSVAAQNAQLTVNNVA 233 +TS TG ++ MT+SV+GDD L + Y + S M +V A +A+LTVN ++ Sbjct: 181 LTSKTTGTESEMTVSVTGDDDLSKVLSYTPEPAGGSGSGSGAMTQTVKAADAKLTVNGIS 240 Query: 234 IENSSNTISDALENITLNLNDVTTGN--QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 I SN I+DA E +TL L T +TL + D+ + AI+ +V+AYNSL TF+S Sbjct: 241 ITRQSNVITDAPEGVTLTLKSKTKAGEPETLNVVHDSKPTKDAIQAFVDAYNSLQTTFTS 300 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 LTKYTAV+AGAD QS+SNGAL+GD TLR IQTQLKS L+++ + KTLA +GIT + S Sbjct: 301 LTKYTAVEAGAD-QSTSNGALVGDGTLRNIQTQLKSQLASS-QAGDIKTLASLGITQEIS 358 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDG 410 GKL++D+DKL ALK + V GDG+ TG T + L L T+ G +K ATDG Sbjct: 359 -GKLKVDSDKLDKALKDKPNAVTQFFAGDGENTGFATKMDKLLNDALDTSKGTLKNATDG 417 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++K+L L K + + I+A + RYK QF QLD L+TS NST S LT QF+ Sbjct: 418 INKSLKNLDKQVVSTTANINATIERYKIQFAQLDKLVTSFNSTGSMLTAQFK 469 >UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Enterobacteriaceae RepID=C9XV84_CROTZ Length = 487 Score = 344 bits (883), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 218/477 (45%), Positives = 314/477 (65%), Gaps = 14/477 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS L L+ + D L AA++ LT I+ QQS++ +LSAY L+S+L + QTA Sbjct: 12 MATISNLGVGSNLGLADLYDKLEAAEQTKLTVITKQQSAYNTQLSAYSKLQSSLQSLQTA 71 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT- 119 L K +++TS +S+ TAF+ATT +A+ G YT++V +A+AQ LT+ + T Sbjct: 72 TATLGKTATWNSTSVSSTNTAFAATTTSDAMTGDYTVNVKQMAKAQVLTSGSIASSTTQL 131 Query: 120 -AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 A + +TI Q G P+T+ ++ ++SL+GI AIN A VSAS+I +G++RL Sbjct: 132 GATTGTTRTVTISQPGTSKPLTVSLADGDTSLNGIAKAINKAGGNVSASVIKASDGDFRL 191 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +TS TG N MT++V+GDD LQ +G+D+S + + + A+QNA++ VN++ IE S+ Sbjct: 192 MLTSKTTGTTNDMTVTVTGDDTLQGIIGFDSSTKTGALSIQTASQNAKVVVNDIEIERST 251 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N ISDAL TL L +T N+TL++T+ T + A+ DWV AYNSL T +S+TKY V Sbjct: 252 NVISDALPGTTLTLKAQSTANETLSVTRATDANKKAVTDWVTAYNSLQSTIASVTKYVKV 311 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP------SD 352 D G D+QSSSNGAL+GDS +R+IQ+QL+S L+ V S S LAQ+G+T DP + Sbjct: 312 DKG-DTQSSSNGALIGDSNVRSIQSQLRSTLTQ-VQSGSVAILAQLGVTQDPVLAADGAA 369 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT----GIIKAAT 408 G L++D KLT AL ++ V A VGDGK TG+ T + + LTS LSTT G+I+ A Sbjct: 370 GVLKIDDAKLTKALNENPDAVQAYFVGDGKTTGLATQMNNTLTSMLSTTTGKEGVIQNAK 429 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 D ++ TL L K Y + I+A +ARYK QF+ LD L++ LNSTS+YLT+QF ++S Sbjct: 430 DSINDTLKSLDKRYTSMEASIEATMARYKAQFSNLDSLVSKLNSTSTYLTKQFSSSS 486 >UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=4 Tax=Enterobacteriaceae RepID=C5BAA4_EDWI9 Length = 475 Score = 342 bits (876), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 197/468 (42%), Positives = 284/468 (60%), Gaps = 9/468 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L +T ++ LTP NQQ S+ +KL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+K D F+ T S+ F+ TT NAI G Y+IS++ LAQAQ+LT +T D +A Sbjct: 61 SKDLAKLDTFTITKA-STHDQFNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSA 119 Query: 121 IAT---SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 T S +LTI G I ++ +SL G+RDAIN + A V ASII + + EY Sbjct: 120 QGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINKSGANVKASIIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--GMEVSVAAQNAQLTVNNVAIE 235 LS+T+N TG + + L+VSGD L + Y+ + +N GM+ +V Q+A+LT+N + I Sbjct: 180 LSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPIT 239 Query: 236 NSSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 SSN I+D + +TL L T Q L I+ D I +W ++YNSLIDTF +LT Sbjct: 240 RSSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALT 299 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 K+T V G + + +NG LLGDSTLR IQ+ +K LS+ ++ + K + +GI TDP G Sbjct: 300 KFTPVKQG-QAPAFNNGPLLGDSTLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTG 358 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 KL +D KL + + V L +G+GK TGI + + ++ + G++ + T ++ Sbjct: 359 KLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRDYVKSNGVLDSTTRSINN 418 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 +L L+ ++ + IDA ++RYK QF LD LM+ LN TSSYLTQQF Sbjct: 419 SLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQF 466 >UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 Tax=Enterobacteriaceae RepID=C6C371_DICDC Length = 499 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 202/447 (45%), Positives = 298/447 (66%), Gaps = 18/447 (4%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGN 89 LT I+ +Q+S+ AKL+AYGTL+SAL TF TA ALS + L++ T+++T +F+AT Sbjct: 50 LTAITTKQTSYEAKLTAYGTLQSALETFSTATEALSDSSLYTTKKTSTNT-SFTATAEST 108 Query: 90 AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ-QGGDKDPITIDISAANS 148 A G Y++ VT LA AQTL + T T +S S T+ G + + ++ + + Sbjct: 109 ASTGSYSVQVTQLATAQTLASATQSSKTTELGDSSLSSRTVTITVGSNTAVNVTLTNSQT 168 Query: 149 SLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGY 207 +LSGI AIN+AKAGV+ASII G+ Y+L++TS+DTG A T +VS DD L +GY Sbjct: 169 TLSGIASAINSAKAGVTASIIQSGDSSYQLTLTSDDTG--EASTFTVSSDDTTLNGIIGY 226 Query: 208 D--ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISD-ALENITLNLNDVTTGNQTLTI 264 D ++++SNGM VAAQNA+LTVN ++IE SSNT++D E +TL L+ V++ +TLT+ Sbjct: 227 DGDSTSTSNGMTEQVAAQNAKLTVNGISIERSSNTVTDVPAEGVTLELSSVSSSAETLTV 286 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 ++ + A +A+ DWV+AYN+L+ +F++L+KYT+VDAG +SQSS NGAL+GDS L +I+TQ Sbjct: 287 SKSITDAVSAVSDWVDAYNTLLSSFATLSKYTSVDAG-ESQSSDNGALVGDSVLSSIKTQ 345 Query: 325 LKSMLSNTVSSSSYKTLAQIGITTDPSD---------GKLELDADKLTAALKKDASGVGA 375 LKS+LS+ SS +YK + Q+GI+ + S G L LD + L AL +DAS V Sbjct: 346 LKSLLSHAQSSDTYKVITQLGISIESSSKDDNDNTIYGTLSLDDETLINALTEDASAVSD 405 Query: 376 LIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 VG+GK TG+ T + S ++++ G+I A +GV ++KL +Y A +I+ ++AR Sbjct: 406 FFVGNGKTTGLATQMVSAISTYTDDDGVIDGAEEGVQSIIDKLADNYTATQSQIETRMAR 465 Query: 436 YKEQFTQLDVLMTSLNSTSSYLTQQFE 462 YK+QF LDVL++ LNSTS LT F+ Sbjct: 466 YKKQFVALDVLVSELNSTSDTLTSMFD 492 >UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 Tax=Enterobacteriaceae RepID=C6D975_PECCP Length = 474 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 208/485 (42%), Positives = 285/485 (58%), Gaps = 38/485 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L S+L L A+ L PI+ QQSSF A+LS LKSAL +TA Sbjct: 1 MASISSLGVGSGLPLDSLLTQLKTAENQKLVPITTQQSSFKAQLSGISALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+ ++ F ++T +S+ AFS TT A+AG Y+I V LAQA ++T+ Sbjct: 61 NDALAISESFGIVKGSIDGITSTKVSSTNKAFSTTTDSKAVAGTYSIDVKQLAQAHSITS 120 Query: 111 RTTRDDTKTAIATSDSKLTIQQGGDK---------DPITIDISAANSSLSGIRDAINNAK 161 T + ++T+D+KL I Q K + IDI A +SL+ +RDAIN Sbjct: 121 -TAKTSATEPLSTTDTKLVISQDNGKFTKVGDDYLKYLEIDIKAGETSLNDVRDAINKVN 179 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS-V 220 V+AS++ + EY L +T+ ++G ++ +S+ GDD ++ NG V Sbjct: 180 GTVTASVVKAKDNEYYLMLTAKNSGTESK--ISIGGDD----------TSVFNGTPTEKV 227 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLN-LNDVTTGN-QTLTITQDTSKAQTAIKDW 278 AA+NAQ+T N + IE SN ISDA E +T+N L TG +TLTI QD + + IK W Sbjct: 228 AAKNAQITANGIEIERQSNAISDAFEGVTINLLAQTETGKPETLTIEQDITGMKDTIKAW 287 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS-S 337 V+AYN+L DT S+ TKYTAV+AG +SQ SSNGALLGDST+R IQ++LK+ L+ S Sbjct: 288 VDAYNALQDTISAQTKYTAVEAG-ESQVSSNGALLGDSTVRGIQSKLKAQLTTVQSGGDE 346 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 ++ LA +GIT + GKLE+ KL ALK++ V VGD KTG T + L Sbjct: 347 FRILADLGITQNFKTGKLEISDTKLEKALKEEPGRVRDFFVGDNDKTGFATQTRTYLKEV 406 Query: 398 LSTT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 L T+ G+IK DG++ +L KL D I++ +A Y++QF LD MT +NST S Sbjct: 407 LDTSEGLIKTKEDGINSSLKKLDTQAARVQDAIESTIAIYQKQFVDLDKAMTDMNSTMSR 466 Query: 457 LTQQF 461 LT F Sbjct: 467 LTSMF 471 >UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pectobacterium atrosepticum RepID=Q6D6F5_ERWCT Length = 472 Score = 306 bits (785), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 205/484 (42%), Positives = 281/484 (58%), Gaps = 38/484 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L+ +L L A+ L P+++QQSSF A+L+ LKSAL +TA Sbjct: 1 MASISSLGVGSGLGLADLLAQLRTAENQRLVPLASQQSSFKAQLTGVSALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+K++ F ++T +S+ AF+ TT A+AG +TI V +LAQA ++T+ Sbjct: 61 NDALAKSESFGIVKGSIDGITSTKVSSTNKAFTTTTDSKAVAGSFTIEVNNLAQAHSITS 120 Query: 111 RTTRDDTKTAIATSDSKLTIQQGGDK---------DPITIDISAANSSLSGIRDAINNAK 161 T+ AT D+K I Q K + IDI A +SL+ +RDAIN Sbjct: 121 AAKTSATEPLSAT-DTKFVISQDNGKFTKVGDDYLKSLEIDIKAGETSLNDVRDAINKVN 179 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 V+AS++ + EY L +T+ ++G D+ +SVS +D + +G VA Sbjct: 180 GTVTASVVKAKDNEYYLMLTAKNSGTDSK--ISVSDNDGI---LGTTVE--------KVA 226 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN--QTLTITQDTSKAQTAIKDWV 279 AQNA + N +AIE SNTISDA E +TL L T + +TLTI QD + + IK WV Sbjct: 227 AQNASIVANGIAIERQSNTISDAFEGVTLTLQAKTEASKPETLTIDQDITGMKDTIKAWV 286 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-VSSSSY 338 +AYNSL DT +S TKYTAV+AG ++Q++SNGALLGDST+R IQ QLK+ L+ S + Sbjct: 287 DAYNSLQDTINSQTKYTAVEAG-ENQANSNGALLGDSTVRGIQNQLKAQLTTIQTESDDF 345 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 + A +GIT + GKLE+ KL ALK++ V A VGD K G T + L L Sbjct: 346 RIFADLGITQNSKTGKLEISDTKLDKALKEEPGKVQAFFVGDNDKQGFATQTRTYLKEVL 405 Query: 399 ST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 T GIIK DG++ TL KL + I+ +ARY++QF +LD MT +N T S L Sbjct: 406 DTNEGIIKNKEDGINSTLRKLDTQSTRMKNGIEDTIARYQKQFVELDKAMTKMNGTLSSL 465 Query: 458 TQQF 461 T F Sbjct: 466 TSMF 469 >UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax=Gammaproteobacteria RepID=Q1QVX4_CHRSD Length = 458 Score = 301 bits (770), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 184/465 (39%), Positives = 285/465 (61%), Gaps = 20/465 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M +I+SLGVGSGLDLS +LD L A+ A L PIS+Q+ S+ AKLSA+G L++AL + + + Sbjct: 1 MPTITSLGVGSGLDLSGLLDQLKEAESAKLEPISDQKQSYKAKLSAFGRLENALESLRES 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL K + F A S+ A + +T A+ G+Y + V+ LAQ+QTL + +D + Sbjct: 61 ATALGKPETFQALSSKMQGEAVTVSTDSTAVPGRYQVEVSALAQSQTLASSGFAEDAE-- 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG-EYRLS 179 +AT + TI + + +I + A N++L G+RDAIN+ AG+SASI+N G+G RL Sbjct: 119 LATGELAFTIGE----EAFSITLDADNNTLEGLRDAINDQDAGISASIVNDGSGTPQRLV 174 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-ASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +TS +TG N + +S S D LQ+ G+DA+ +++ M +VAAQ+AQL+VN + I ++S Sbjct: 175 LTSTETGEANQIGIS-STDATLQAAFGFDAADPTASDMRQTVAAQDAQLSVNGIEITSAS 233 Query: 239 NTISDALENITLNLN--DVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 N + AL+ +T +L T + LT+++D + +I D+V+AYNSL DT +SLT + Sbjct: 234 NRVEGALQGVTFDLQATHETGTSDALTLSRDDKAIKASINDFVDAYNSLQDTMASLTSF- 292 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 D++S G LLG+STLR +++QL++ + N V Y+ L +GI+ +GKLE Sbjct: 293 ------DAESGEAGQLLGNSTLRGVESQLRNAMGN-VGDGDYRLLGDLGISL-TVEGKLE 344 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 +D D L A++ + V A G G + + L + L G + AT G+ ++ Sbjct: 345 VDDDVLDEAVEGNLRDVSAFFEGSDGSDGFAAKLDAALGTMLDEGGSLDVATSGIDTSIE 404 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + Y + IDA +ARY+EQF LD ++ +NSTSSYLTQQF Sbjct: 405 RVDERYTSMQASIDATIARYREQFADLDSMVAQMNSTSSYLTQQF 449 >UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Enterobacteriaceae RepID=FLID_XENNE Length = 489 Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 188/489 (38%), Positives = 258/489 (52%), Gaps = 33/489 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSG+DL S+LD L AA+K L P++ QQ+S+ AKL+ +GTLK +L ++A Sbjct: 1 MASISSLGAGSGMDLGSLLDKLQAAEKKRLEPLAQQQTSYKAKLTGFGTLKGSLEKLKSA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D + T T F+ +T A G Y I V LA+AQ+L + T K Sbjct: 61 SEELKKFDKLNTTKTNGDHKTFTPSTDSKASPGNYEIEVQQLAKAQSLQS-TEVSGVKKL 119 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV------ 171 + + I Q G+K+P+ I + +SL IRDAIN + V+ASII Sbjct: 120 LGEQGKGTRTIIITQPGEKEPMKISLKDDETSLVEIRDAINKKEGNVNASIIKADENGTE 179 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG---MEVSVAAQNAQLT 228 G+ L +TS G + MT+ V GDD L + Y + G M V A NA+LT Sbjct: 180 EEGKSYLILTSKKAGTRSIMTIKVEGDDELGKLLNYTSDGKGGGSGAMTQKVGAANAKLT 239 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQT------------------LTITQDTSK 270 VN + IE +N I DA E I LNL V+ + L +++D Sbjct: 240 VNGIPIERQTNEIKDAPEGIILNLKKVSETEEVIVKVNGEDKKIPRPKTEILVVSRDIEP 299 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 + AIK WV++YN L TF SL K+ V G ++ S NGALLGD TL+ IQ+QL+ L Sbjct: 300 MKEAIKKWVDSYNELQTTFDSLAKFKPVGKG-EAASKDNGALLGDGTLKGIQSQLRHQLF 358 Query: 331 NTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTI 390 + TL ++GI DG LE+ +KL LK+ ++ V A +GDG K G T T Sbjct: 359 AAQDVADIATLNKLGIKQK-LDGTLEISDEKLEKNLKEKSADVKAFFMGDGAKPGSTQTY 417 Query: 391 GSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + G I AT+G++K L L + + IDA + RYK QFT+LD L+ SL Sbjct: 418 NLLKETLDGHEGTIATATEGINKRLKTLERQVEQTNRNIDATMERYKRQFTELDKLVNSL 477 Query: 451 NSTSSYLTQ 459 N+TSS L Q Sbjct: 478 NNTSSSLFQ 486 >UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN n=2 Tax=Cupriavidus RepID=Q46QZ5_RALEJ Length = 471 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 202/482 (41%), Positives = 282/482 (58%), Gaps = 25/482 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS LDL+S+LD L A++A L I + +SF AKLSA+G ++S LT +Q A Sbjct: 1 MAAISALGVGSNLDLTSLLDQLKTAEQAPLDAIDKRATSFQAKLSAFGQVQSVLTAYQAA 60 Query: 61 NTALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L A F A +T ST S TTA NA+ G Y+I+V LA AQ+L + D K Sbjct: 61 AKKLGDATTFGAVKATVGSTDIMSVTTASNAVPGNYSITVKTLATAQSLVSGQIADQ-KA 119 Query: 120 AIATSDSKLTIQQGGD--KDPITIDIS------AANSSLSGIRDAINNAKAGVSASIINV 171 AIA + ++ G DP S A N+SL IRDAIN A GV+ASIIN Sbjct: 120 AIAGTSGEIVFDFGEALAADPTATPTSTKKVTIANNASLQDIRDAINKAGVGVTASIIND 179 Query: 172 GNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 G+ YRL +TS+ TG M +S SG AL + +G+D SA++N ME V NA L VN Sbjct: 180 GSSTPYRLVLTSDKTGTQATMRVS-SGSAALNNIVGFDPSATTNAMEQKVPPANATLKVN 238 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + I + SN + DA + +T+NL G +LT+T+D +++I+ +V AYN++ T Sbjct: 239 GIDIVSQSNAVVDAGQGLTMNLTK--EGTTSLTVTRDYDSIKSSIQAFVTAYNNIQTTAK 296 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITT 348 SLT + D+ S+ L GD TLR+IQ +L+SML T+ + + LA IGI Sbjct: 297 SLTAF-------DTSKQSSSPLTGDGTLRSIQMRLRSMLGGTMPDGNGGSISLADIGIKF 349 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 D G + +D KLT AL + +GV A+ GI + + +T G +K A Sbjct: 350 DGKTGTMSVDDTKLTKALNNNLAGVTAMFSSTTGTGGIGKQVSGYVDGLSATNGSLKTAQ 409 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE--NNSN 466 DG++KTL L K+Y+ + DRI+ + RYK QFTQLD++++ +N TSSYLTQQF NN++ Sbjct: 410 DGITKTLKDLEKNYSDSQDRINTTMDRYKAQFTQLDLMVSQMNRTSSYLTQQFTALNNAS 469 Query: 467 SK 468 SK Sbjct: 470 SK 471 >UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXS2_VARPS Length = 482 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 206/493 (41%), Positives = 289/493 (58%), Gaps = 51/493 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS LDLS++L L A+ L + +Q S+T+KLSAYGTL+S+L T Q A Sbjct: 1 MASISSLGVGSNLDLSTLLSQLQTAESQPLVALQQRQVSYTSKLSAYGTLQSSLGTLQAA 60 Query: 61 NTALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS LF SS T +A AG A AG Y I VT LAQ Q+L T Sbjct: 61 AKKLSDPALFQGVKAVSSATDVLTAAAAGTAAAGTYAIDVTQLAQPQSL---VAAGQAST 117 Query: 120 AIATSDSKLTIQQGG------------------DKD------PITIDISAANSSLSGIRD 155 A +TI G KD PI+ID S N++L+GIRD Sbjct: 118 TAAIGSGTITIDFGAITGGTLDAATGTYSGSGFTKDATRTAVPISIDSS--NNTLAGIRD 175 Query: 156 AINNAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN 214 AIN AKAGVSASI+N G+G RL +TS+ TG ++M +SV+GD ALQ+ + D + + N Sbjct: 176 AINAAKAGVSASIVNDGSGTPNRLVLTSSQTGEASSMRVSVAGDAALQNLLNNDPAGTQN 235 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 + +VA QNA+L+VN +A+ ++SNT+ +A++ TL L + TG+ +L+ DT+ +TA Sbjct: 236 -LRQTVAGQNAKLSVNGIAVTSASNTVKEAIQGTTLTL--LKTGSSSLSTQADTAAVETA 292 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 I D+V AYNSL T ++LT Y + S + AL+GDSTLR +QT+++ L+ + Sbjct: 293 INDFVKAYNSLQATANTLTAY-------NQDSKTGAALVGDSTLRNLQTRIRQALTTPQA 345 Query: 335 SSS--YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 K L++IG+ DG + +D+ KL +AL + +GV L TG T G Sbjct: 346 GGPDDMKVLSEIGVAFQ-KDGTMAVDSTKLKSALASNLAGVSGLFA---SATGSTAGYGK 401 Query: 393 NLTSWL----STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 L++ + ST G +K A+DG++ +L +L + Y R+DA+V RY+ QFTQLD+LM+ Sbjct: 402 QLSALVDDLTSTGGALKVASDGMAASLKQLDEQYADMKTRVDAKVERYRTQFTQLDLLMS 461 Query: 449 SLNSTSSYLTQQF 461 +N TSSYLTQQF Sbjct: 462 QMNRTSSYLTQQF 474 >UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KAZ0_PECWW Length = 479 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 193/474 (40%), Positives = 285/474 (60%), Gaps = 15/474 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G SG +++LD LT +++ +TP++NQ+ + ++ +A+ TLK+ALT ++A Sbjct: 1 MANISFTGSTSGF--TAVLDQLTTFEQSRITPVNNQKKIYQSRDTAFDTLKTALTKLESA 58 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT---RDD 116 N AL+KA+ + TS TS + AF+ATT+ +A +G Y++ V +LA A +L + +D Sbjct: 59 NEALAKANSINKTSITSGESKAFTATTSSSASSGSYSVEVENLATAHSLLSSEFSSSKDP 118 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T LTI Q G + P+ I ++ +SL GIRDAIN VSASII + Y Sbjct: 119 LGTTTDGGTRTLTISQPGQEKPLEIQLTDKQTSLEGIRDAINKTNGSVSASIIKADDNTY 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGY--DASASSNGMEVSVAAQNAQLTVNNVAI 234 L++T+ DTG MT+SV+GD L S + Y D A S M+ AA+NA + +N + I Sbjct: 179 YLALTAKDTGTQAKMTVSVTGDTLLNSKLNYTPDDGAGSGAMKQQAAAENAVVKLNGITI 238 Query: 235 ENSSNTISDALENITLNLNDVTTGN--QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 SNT++DA++ ++LNL + + LTI DT+ AI++WV+AYNSL T ++ Sbjct: 239 TRQSNTVTDAVDGVSLNLKAESAPGTAEKLTIATDTAPMNKAIQEWVDAYNSLQTTIGNV 298 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 T +TA D + SSNG LLG+ST+R IQ LK+ +S+ S S TL ++GI +P D Sbjct: 299 THFTAADHNTATPDSSNGVLLGNSTVRGIQATLKTQISSAQSGMSISTLNEMGIKQNPKD 358 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-----GIIKAA 407 GKLE+DA KL +L + +S V VGDGKKTG T + + L L T+ G I+ A Sbjct: 359 GKLEIDATKLQTSLAEKSSSVTEFFVGDGKKTGFATQVNTYLDGVLDTSTGNKKGAIQIA 418 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 D ++ TL + K ID +ARYK QF++LD L++ LNST +LT+QF Sbjct: 419 KDSIADTLKTIEKTRVRTQLSIDDTIARYKSQFSKLDKLVSDLNSTGDFLTKQF 472 >UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax=Cupriavidus RepID=Q1LL30_RALME Length = 498 Score = 278 bits (710), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 201/492 (40%), Positives = 296/492 (60%), Gaps = 42/492 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 IS+LGVGSGLDLSS+LD LT A++A LT I+ +Q S+ KLSAYG ++S L FQ + + Sbjct: 16 ISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQ 75 Query: 64 LSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L+ F AT+ +SS TA SA + A G Y ++VT LAQAQ+L ++ + + AI Sbjct: 76 LASQSFFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKG-QANQAAAIG 134 Query: 123 TSDSKLTIQQ--GGDKDP-----------------------ITIDISAANSSLSGIRDAI 157 T + GG D + I I +++++L GI AI Sbjct: 135 TGTIHVDFGSISGGTLDSNTSSATYGTYTGATFTANSANTGVDITIDSSHNTLQGIASAI 194 Query: 158 NNAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVS---GDDALQSFMGYDASASS 213 NNA AGV+ASIIN G+G YRL + SN+TG N++ LSV+ G AL + +GYD + + Sbjct: 195 NNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGTALANLVGYDPAGTQ 254 Query: 214 NGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQT 273 N ++ +VAAQN+QLTVNN+AI+++SNT+SDA+ +T+ L TG ++++ +DTS T Sbjct: 255 N-LQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTL--AQTGTSSVSVQRDTSSIMT 311 Query: 274 AIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV 333 I+ +V AYN+L T +SL+ Y D + + L GDSTL +Q+Q++S+L+ Sbjct: 312 GIQGFVTAYNNLQSTSASLSAY-------DPSTQTASPLTGDSTLSIMQSQMRSLLNTPQ 364 Query: 334 SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 S+++ TL+QIGI+ DG L +D KLT AL +A V L +G I + Sbjct: 365 SNNALTTLSQIGISFQ-DDGTLAVDTSKLTTALNNNAGAVANLFGNTDGVSGYGNQISTL 423 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + + S+TG + AT G++ TL L+ Y+ +I+A +A YK QFTQLDV+M+ + ST Sbjct: 424 VKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQMQST 483 Query: 454 SSYLTQQFENNS 465 S+YLTQQF +S Sbjct: 484 SAYLTQQFSTSS 495 >UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax=Cupriavidus RepID=Q1LBH5_RALME Length = 487 Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 184/499 (36%), Positives = 275/499 (55%), Gaps = 43/499 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA++ LG+GS + L ++LD L A++ L + Q +++ AKLS YGT+KS L+ FQ + Sbjct: 1 MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQAS 60 Query: 61 NTALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT-TRTTRDDTK 118 +L+K D F A + S++ + T NAIAG Y ++V LAQAQ+L + D Sbjct: 61 ANSLAKLDTFGAVKAQVSNSDVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAI 120 Query: 119 TAIATSDSKLTIQQGGDKDPI--------------------TIDISAANSSLSGIRDAIN 158 T + + G D DP T+ I ++N +L GIRDAIN Sbjct: 121 IGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAKTVTIDSSNQTLQGIRDAIN 180 Query: 159 NAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYD--ASASSN 214 A GV ASIIN G+G YRL + S TG AM++ ++G LQ+ GYD A Sbjct: 181 KANMGVKASIINDGSGTPYRLVLNSEKTG--EAMSMRITGSSPELQALAGYDPVAGPQPG 238 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 GM+ V A NAQLT+N++AI ++SN ++DA + +T+ L TG ++T+TQD + A Sbjct: 239 GMKEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKK--TGTTSMTLTQDLDSIKAA 296 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-- 332 ++ AYN+L LT + D +S + AL GD LR IQ+ L+S+L+ Sbjct: 297 VQGLATAYNNLQSATKQLTAF-------DVKSGTKAALTGDGVLRGIQSTLRSVLNTPEA 349 Query: 333 -VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 + + TLAQ+G+T DG + +D KL AAL + + V AL GDG K GI + Sbjct: 350 GMRDGAATTLAQLGVTLQ-KDGTMSVDTKKLDAALAGNLADVTALFGGDGTKGGIARRLS 408 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + + T G + +AT G+ +++ L K Y++ S+ IDA + R ++QF LD+ ++ +N Sbjct: 409 EAVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMN 468 Query: 452 STSSYLTQQFE--NNSNSK 468 T YLTQQF NN+NSK Sbjct: 469 RTKDYLTQQFSAMNNTNSK 487 >UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Providencia RepID=D1NZG8_9ENTR Length = 478 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 170/476 (35%), Positives = 256/476 (53%), Gaps = 22/476 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA IS+LG+G+ LDL+ +D L A ++ L P++ Q++S+ A++SA+G ++S+L + A Sbjct: 1 MAGISTLGIGANLDLNVQMDQLEAMERRRLDPLTQQKASYDAQISAFGKMQSSLEKLKKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K + S T +F T G AIAG + ++VT LA+AQT+ T+ D K Sbjct: 61 AEDLKKYEDISTTKVNGEYKSFDVKTDGKAIAGVHDVTVTQLAKAQTVATK-GHSDNKEL 119 Query: 121 IATSDSKLTI-----QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 + S + TI Q DKD I I + A ++SL I DAIN GVSAS+I + + Sbjct: 120 LGNSAKERTITITQPSQKEDKDKIVIKLDAGSTSLIEIADAINKTDKGVSASVIKDKDNQ 179 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-----------SASSNGMEVSVAAQN 224 Y L VTS G D+ ++++V GDD L + ++ ++GME V QN Sbjct: 180 YHLVVTSKKAGTDSRISINVEGDDQLAKVLNVESVIDDKGNVTIKDKDTSGMEQKVPPQN 239 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAY 282 A+L ++ +E+ +N D +TL+L + + L I++D A+ IK WV+AY Sbjct: 240 AELIIDGFELESQTNEAKDLFPGLTLSLKKESEEGKADHLIISEDIEPAKVKIKAWVDAY 299 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLA 342 N + LTKYT G + +NG L+GDSTLR IQ+ L++ + + +S L Sbjct: 300 NEFQNLAKELTKYTPNKNGT-TPDKTNGPLIGDSTLRVIQSTLRTHVRSPQNSGELNLLN 358 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-T 401 ++GI DG LE+D KL AALK + S V GDGK+TG T L L T Sbjct: 359 KMGIKQ-KLDGTLEIDNKKLDAALKDNPSSVKTFFAGDGKETGFATENFKFLKETLDTKE 417 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 G + ATDGV + L K + +I+ + ++ QF LD +M+SLNST++ L Sbjct: 418 GTLHNATDGVQRKKKSLDKRIEQTNKQIENTMDMHRRQFQNLDKMMSSLNSTTNSL 473 >UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAR2_THASP Length = 447 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 175/474 (36%), Positives = 268/474 (56%), Gaps = 42/474 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +IS+ GVGSGLD+ SIL+ L A ++ L+ + QQ S+ +KLSA+G L+SA++ Q A T Sbjct: 2 AISAAGVGSGLDVGSILNQLMAVERQPLSRLQEQQKSYQSKLSAFGQLQSAMSKLQDAAT 61 Query: 63 ALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQ-TLTTRTTRDDTKTA 120 AL+K+ FSAT+ ++ T AF+ ++ +A G Y I V+ LA+AQ T T+ TT D Sbjct: 62 ALTKSSTFSATTASAGDTKAFTVSSTASAQTGSYNIEVSQLARAQRTATSATTAPD---- 117 Query: 121 IATSDSKLTIQQGGDKD-------PITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 + GG D P T+++ AA +L +RDAIN A AGVSA I+N N Sbjct: 118 ---------LSGGGSIDITLGTGTPKTVNL-AAGGTLQDLRDAINAADAGVSAQIVN--N 165 Query: 174 GEY-RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 G +L ++S +TG +A L G L F +D +A + M A++A+L+++ + Sbjct: 166 GTVNQLVISSKETGAASAFKLE--GFGGLSEF-SFDPAAPAGDMVSVQQAKDAKLSIDGL 222 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 AI SSNT+SDA+E +TL L T T+T+ ++ A+ AI D+ AYN L S Sbjct: 223 AITRSSNTVSDAIEGVTLTLAKPTESETTMTVARNDETAKKAIDDFAKAYNELNSLIRSQ 282 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL---AQIGITTD 349 T Y A ++ G L GD+ +R+IQ+QL+ + +N +S S T+ A I I TD Sbjct: 283 TSYNA-------ETKKAGTLNGDTGVRSIQSQLRGVFANPISGLSGATMLSDAGISIRTD 335 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 G + +D+ KL +AL + + L G+G G T+ + + L+T G++ + TD Sbjct: 336 ---GSMSVDSTKLASALADPSKKIAELFAGNGTVDGFAKTLETRIKDMLATDGLLTSRTD 392 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 G+++T+ A R++ ARY QFT LD M+S+++TS+YLTQQ N Sbjct: 393 GINRTIKSFDSRIEAFELRLEKVQARYSAQFTALDAAMSSMSTTSAYLTQQLAN 446 >UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R090_CHRSD Length = 441 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 166/462 (35%), Positives = 263/462 (56%), Gaps = 26/462 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI+SLGVGSGLDL+ +LD L A++ L PI QQ+ AK+SAYG L+ AL+ Q++ Sbjct: 1 MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+ +LF++ ++ + SA +A G+Y + VT LA A ++ T+ D+ Sbjct: 61 ASNLNDPELFNSVTSDVEGDSVSAAATPDAPPGRYDVDVTQLATASSIATQGV-DEEAVL 119 Query: 121 IATSDSKLTIQ-QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 A +++ L + G IT++ A+S+LS +RDAIN + +GVSASI+ G+ + RL+ Sbjct: 120 NAGAEASLDVTLNDGTAQNITVE---ADSTLSDVRDAINASDSGVSASIVFDGS-QSRLA 175 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 + S TG + + SV +F G D A E+ Q+A+L VN +AI + SN Sbjct: 176 IASESTGAEAGIN-SV-------TFNGLDGLALDTATEIQ--GQDAKLDVNGIAITSDSN 225 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + +A++ TL+L++ TG T+T+ +D + AI +V++YNS+ T LT + Sbjct: 226 QVEEAIQGTTLSLSE--TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSF---- 279 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 D++S G LLGD T R +TQL+S L+++V TL+ IGI+ + DG+LE+D Sbjct: 280 ---DAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSDIGISMNV-DGELEVDD 335 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 +KL + + AL G G GI L + L G+++ A G + + +L Sbjct: 336 EKLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLD 395 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + Y++ D I + V RY+ QF +LD ++ +N TSSYLTQQ Sbjct: 396 ERYSSMQDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQL 437 >UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K917_AZOSB Length = 473 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 172/485 (35%), Positives = 274/485 (56%), Gaps = 41/485 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S GS LD+ S++ L + + L+ ++ +++S+ AKLSA+G +KSALT+ QTA Sbjct: 1 MAAITS--SGSILDIDSLVKGLMSVESRPLSLLATKEASYQAKLSAFGQIKSALTSLQTA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL+ D F+AT T + F+AT+ A AG Y+I VT +A+ Q ++T T+ + Sbjct: 59 TTALNSTDKFAATKATVAGDGFTATSDAKAAAGSYSIDVTQMAKIQRVSTATS-----ST 113 Query: 121 IATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAIN-NAKAGVSAS 167 + K+TI+ G D P T + +L +RDAIN + G+ AS Sbjct: 114 FVPAAGKMTIEYGTVKTTDGTKSFASDSPPRTATLDFEGGTLEQLRDAINKDTTLGLKAS 173 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS---NGMEVSVAAQN 224 I+N G +L ++ TG + M ++G+ L + +D SA++ + M AAQ+ Sbjct: 174 IVNNGTTS-QLVLSGTKTGAN--MAFKLTGESGLAD-LSFDPSATAAAGDKMYSVQAAQD 229 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTG-----NQTLTITQDTSKAQTAIKDWV 279 A L V+ +++ SSNTISD ++ +TL LN +G + T+T+ D S A+TA+ +V Sbjct: 230 ALLKVDGISVTRSSNTISDVIDGVTLTLNKEPSGTATSLSGTVTVAADQSAAKTAVDAFV 289 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSY 338 AYN + T SLT Y ++++ + L GD+T R+IQ QL+S L+ + S + Sbjct: 290 KAYNEVQSTLKSLTAY-------NTETDTAATLTGDATARSIQGQLRSALAQSFSGLGNA 342 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +L+QIGIT DG L +D+ K A+ A VGAL G K G L+S + Sbjct: 343 SSLSQIGITF-AKDGTLSVDSTKFNKAMSDPAMNVGALFAGTDKIDGFADVFSKKLSSMI 401 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + G+I + TDG++ T+ +TK Y+A R++A ARY+ QF+ LD L++ ++ TS+YL+ Sbjct: 402 DSGGVIASRTDGINSTIKSITKQYDAMETRLEAMEARYRSQFSSLDTLLSGMSQTSTYLS 461 Query: 459 QQFEN 463 QQ N Sbjct: 462 QQLAN 466 >UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bordetella RepID=Q2L175_BORA1 Length = 459 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 177/472 (37%), Positives = 272/472 (57%), Gaps = 30/472 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG SGL L LD L A++ L I+NQQSS+ ++SA+G ++SA+ Q A Sbjct: 1 MATISSLG-SSGLPLQETLDKLQEAEERRLKLITNQQSSYQTRVSAFGKIQSAVEALQKA 59 Query: 61 NTALSKADLFSATSTTSSTTA---FSATTAGNAIAGKYTISVTHLAQAQTLTTRT--TRD 115 A + D+ S ++ T+ T + TA A+AG Y I V+ LA AQ+L ++ +R Sbjct: 60 --AANLGDMGSTSTLTTKVTGNDGVAVATANGAMAGTYNIKVSKLATAQSLQSQAFNSRI 117 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-GVSASIINVGNG 174 D + +T G + +T+ +++SL GI +IN A G+SA+I+N G G Sbjct: 118 DN----MGTGGVITFTVDGKEKNLTL---GSDTSLGGITKSINGDDALGLSATIVNDGQG 170 Query: 175 EYRLSVTSNDTGLDNAMT-LSVSGDDALQSFMGYDASAS-SNGMEVSVAAQNAQLTVNNV 232 +Y L VTS G A+T ++V+G++ L S + YDASA ++ M+ VA +NA+L++N + Sbjct: 171 KYYLMVTSKSEGEKAAVTKIAVTGNNELASALNYDASAPDTSSMKQMVAGKNAELSINGI 230 Query: 233 AIENSSNTISDALENITLNLNDVTTGN---QTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + + +N ++ A++ +TL L VT N T+TI QD SK ++ +V AYNSL T Sbjct: 231 PVVSQTNAVTTAIDGVTLTLTAVTPENGAGSTVTIAQDNSKITPLVQAFVTAYNSLQTTI 290 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 + LT + D Q+ S AL GD R+IQ+ + + L S +TL Q+GIT+D Sbjct: 291 ADLTAFNV-----DKQTQS--ALTGDGATRSIQSSIAAALRVVTGEGSVQTLGQLGITSD 343 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 P G L+LD DKL AL ++ + A+ V K G+ + + L +G IK+ TD Sbjct: 344 PKTGALKLDNDKLIKALNENPAD--AMRVFTSKDNGLAARVSAATDKILGDSGTIKSQTD 401 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G+ KT+ L K Y + S +I+A +A Y+ QF +LD L++ L TS+YL+QQF Sbjct: 402 GLEKTIASLKKQYESTSTQIEATMANYRNQFVKLDALVSQLKVTSNYLSQQF 453 >UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 Tax=Dickeya RepID=D2BX26_DICD5 Length = 484 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 186/451 (41%), Positives = 275/451 (60%), Gaps = 24/451 (5%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGN 89 LTP + S +A+ AY +++++ + QTA T L ++T+ TS+ TAFSA+T Sbjct: 45 LTPYQTKSDSLSAQAKAYSAVEASMKSLQTATTTLQNMKSITSTAVTSTNTAFSASTDST 104 Query: 90 AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI----ATSDSKLTIQQGGDKDPITIDISA 145 A+AG Y+I V +LAQAQ+ + + + +++ S +TI Q P+TI ++ Sbjct: 105 AVAGTYSIFVNNLAQAQSQISGAFSSASTALVSGGTSSTSSTITISQSSQSTPLTISLTD 164 Query: 146 ANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM 205 +SL+ IRDAINNA GVSASI+N G Y L +T+ DTG +AMT+SVS Sbjct: 165 DKTSLNDIRDAINNAGGGVSASIMNNGTSNY-LMLTAKDTGTKSAMTISVS--------- 214 Query: 206 GYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGN--QTL 262 + S+S VAA++A T+N +++ + SNT++ A+ +TLNL + TG+ + L Sbjct: 215 -GNLSSSLGSFTEQVAAKDASFTLNGMSVTSQSNTVATAITGVTLNLKAASATGSSAENL 273 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY---TAVDAGADSQSSSNGALLGDSTLR 319 +I+ D + Q AI++WV AYN+++DT + T Y +A D +QS+SNGAL+GDST+R Sbjct: 274 SISSDATGTQQAIQNWVTAYNNVLDTIKTQTNYNPPSATDTSNGTQSASNGALVGDSTVR 333 Query: 320 TIQTQLKSMLSN-TVSSSSYKTLAQIGITTDPS-DGKLELDADKLTAALKKDASGVGALI 377 TIQ QL+S+++N S S T+A +GIT DP+ +GKL +D KLT LK A V Sbjct: 334 TIQRQLQSLMTNLQTGSGSLHTMADLGITQDPTNNGKLLVDNTKLTNTLKTSAGSVTTFF 393 Query: 378 VGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 GDG TG T G+ L+ L S+ G+IK+A G+ + +TK + D IDA + RY Sbjct: 394 TGDGSTTGFATQAGNYLSKTLDSSDGLIKSAQAGIKTSQATVTKQLASIQDSIDATMNRY 453 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 K QFTQL+ L++ L+STSSYLTQQF S+S Sbjct: 454 KTQFTQLNTLLSKLSSTSSYLTQQFNKTSSS 484 >UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 Tax=Nitrosomonas RepID=Q0AHH2_NITEC Length = 480 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 174/482 (36%), Positives = 268/482 (55%), Gaps = 32/482 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +SS G+GSGLD+S I+ L ++ LT ++ +++ A+LSA+G+LKSAL++FQ + A Sbjct: 2 LSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKA 61 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL------TTRTTRDD 116 L+K LF+ +T + TT + +T+ AG + I V LAQAQ + TT T + Sbjct: 62 LAKPALFTGFKATLTDTTVATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGN 121 Query: 117 TKTAIA--TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 IA T + T +K TI I A S+LS IR+ IN A GV+ASI+N GNG Sbjct: 122 GTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDIRNTINEANTGVTASIVNDGNG 181 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSN--GMEVSVAAQNAQ 226 RL + S DTGL NA+ ++V D S + +DAS++ M +V A+NA+ Sbjct: 182 N-RLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSL 285 + ++ +A+E SSNTI+DALE +T NL G N TLT+ QD + +TA+K +V AYN L Sbjct: 241 MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNEL 300 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS-NTVSSSSYKTLAQI 344 + +L++Y A+ Q+S L GDST+R +Q ++++ML+ N + +L+++ Sbjct: 301 EKSIGNLSRYDT----ANKQAS---VLTGDSTVRMVQNRVRAMLTGNQSAVGGINSLSEL 353 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALI---VGDGKKTGITTTIGSNLTSWLSTT 401 GI+ DG L+LD KL+A L V A +G + G T + L + Sbjct: 354 GISFQ-KDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTE-GFATQLDQLLDGMARSD 411 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G+I DG++ T+ + + A R+ R + QFT LD ++ S+ T++YL QQ Sbjct: 412 GLINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQL 471 Query: 462 EN 463 N Sbjct: 472 AN 473 >UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=Arsenophonus nasoniae RepID=D2TYE5_9ENTR Length = 469 Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 154/472 (32%), Positives = 240/472 (50%), Gaps = 24/472 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++++ LG GSG+ + LD L ++ L P+ +Q + ++SAYG+L++ L Q A Sbjct: 1 MSNMTVLGAGSGMPIGEWLDKLENSENQKLNPLKQKQQKYDKQISAYGSLRAELDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K D + TS + + TT A AG Y + V LAQAQ L T T DD K Sbjct: 61 AETLMKFDKITTTSVSKEHKTVAVTTDEKAAAGNYEVIVEQLAQAQALKTNTI-DDVKKK 119 Query: 121 I-----ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 + + + I+Q +K P+ I +S +SL IRDAIN VSAS++ + E Sbjct: 120 LGGNVTSGQERIFVIKQNSEKQPLEIKLSDEQTSLREIRDAINKTDGNVSASLVKIKENE 179 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++L ++S TG + M + V GD L +A +SN M +VAAQNAQ+ +N + IE Sbjct: 180 HQLVLSSKKTGTEAKMAIEVKGDSTL------NAIFNSNNMTETVAAQNAQVKINGINIE 233 Query: 236 NSSNTISDALENITLNL-----NDVTTGN----QTLTITQDTSKAQTAIKDWVNAYNSLI 286 +N I DA E +T NL D N +T+ IT+D + AIK WV+A+NSL Sbjct: 234 RQTNEIKDAPEGVTFNLLKTSEKDTNNNNSPIAETINITKDIEPTKKAIKGWVDAFNSLH 293 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 + + TKY G ++ S++NG LL DS+ I +Q+K + N L GI Sbjct: 294 SFYKNQTKYVPTKPG-EAPSANNGILLNDSSSAMIFSQVKDLTLNVQDMPDMNHLNHFGI 352 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIK 405 + +GK+ +D KL ALK + V +GDG+K+G T L L G + Sbjct: 353 GFN-HEGKITIDDKKLDEALKDSPAKVKQFFMGDGEKSGFATETFHYLKKTLDKLEGPLH 411 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 T+ +++ L + I A + RY+++F +D ++++ +S+ L Sbjct: 412 FTTESLNQQKKMLHLKMESVQTTIAATLKRYQKKFIAMDQAISNMKQSSNSL 463 >UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID=C4SBN1_YERMO Length = 490 Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 160/488 (32%), Positives = 262/488 (53%), Gaps = 34/488 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS+SSLG+GSG+D +++L+ + A ++ L P + Q+S+ K+SA+G + S+L+ Q + Sbjct: 1 MASLSSLGIGSGIDTATMLEQIKAGEQTRLKPYTIMQNSYKLKVSAWGGISSSLSALQGS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ +D F+ T T SS AF+AT A A ++++++ LA A + T D Sbjct: 61 VKKLT-SDAFN-TLTVSSNKAFTATATSEANADTHSVTISQLATAHKIKTDGV-DSADEM 117 Query: 121 IATSDSKLTIQQGGDKDPIT--IDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 + S+ D T +++ +SL+ I A+N + VSAS+ +G Y+L Sbjct: 118 LGESNGGTRTITITTGDGKTTEVELKDDETSLNQIAKAVNKQDSNVSASVQRTDDG-YQL 176 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN-------GMEVSVAAQNAQLTVNN 231 TS +TG D M++SV GDD L + Y + N GM+ A +A L V+ Sbjct: 177 VFTSKNTGSDGEMSVSVEGDDTLGGKLNYKEDDAGNKEGDPDKGMQQVTKALDATLIVDG 236 Query: 232 VAIENSSNTISDALENITLNLN-----DVTTGN---QTLTITQDTSKAQTAIKDWVNAYN 283 SSN ISD + +TL L D TTG + +T+T+DTS ++++KD+V+ YN Sbjct: 237 SKYTRSSNNISDIIPGVTLVLKQVSESDTTTGEKIPEQMTLTRDTSAIKSSVKDFVDKYN 296 Query: 284 SLIDTFSSLTKYTA------VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SS 335 +L+ S +KY D+ +Q++ NGAL+GDSTLR + +S ++ S Sbjct: 297 ALLKLTSEASKYVPNKTAGLSDSDVATQNAQNGALMGDSTLRGMVGDFRSAVNGVYGDPS 356 Query: 336 SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 + Y +LA IG+ DP+ G++ L+ KL A+ + G+ + +G G+K G+ T++ + +T Sbjct: 357 ADYGSLADIGVKIDPATGQMTLNESKLDEAIADNPDGIADMFIGRGEKEGLATSLSATIT 416 Query: 396 SWL-----STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 +L GIIK +T+G+ + + ID QV RY+ QF LD M+ L Sbjct: 417 EYLGDPDTKMNGIIKDSTEGLDAQIKLMDTQIEKTQKLIDNQVERYRVQFQNLDTTMSKL 476 Query: 451 NSTSSYLT 458 NS S+ L+ Sbjct: 477 NSMSNQLS 484 >UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AUT9_9ENTR Length = 309 Score = 217 bits (553), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 124/310 (40%), Positives = 173/310 (55%), Gaps = 14/310 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+SLGVGSG+ LS L L A++ L P+ Q S+ AK++AYG ++ L Q A Sbjct: 1 MAGIASLGVGSGMPLSQTLAQLEASENKRLEPLDKQMKSYEAKITAYGKIRGQLDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D AT AF TT G A G YT+SVT LAQAQTL + D +T Sbjct: 61 SEDLKKFDKIVATKVDDEFDAFKVTTDGKASVGNYTVSVTQLAQAQTLQSTKVSDVKETL 120 Query: 121 IAT----SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T + L I Q G+K+P+ I++ +S+ +RDAIN + VSA+I+ +GE Sbjct: 121 GETLGEGNKRTLVITQKGEKEPLRIELEDKQTSILELRDAINKKEGNVSATIVKAKDGEN 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L +TS G D+ M ++V GD+ L F+ ++S+ GM+ V A+NA LT+N + IE Sbjct: 181 YLVLTSRKEGTDSKMEITVEGDNKLNEFL---TTSSAKGMKEIVEAKNADLTINGIKIER 237 Query: 237 SSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +N I DA E I LNL T N + + + +D + AIK W +AYN L T+ Sbjct: 238 QTNEIKDAPEGIVLNLKKTTDSNKDNIDKPEIINVARDIEPMKKAIKAWTDAYNELNSTY 297 Query: 290 SSLTKYTAVD 299 SLTKYT V+ Sbjct: 298 KSLTKYTQVE 307 >UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII3_THIDA Length = 665 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 151/392 (38%), Positives = 226/392 (57%), Gaps = 43/392 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ SS+ LD+SSI+ L A ++ LT ++ +++ + A+LSAYG++K A+++FQ A Sbjct: 1 MATTSSV-----LDISSIVSQLMAVERRPLTKLAAREAGYQARLSAYGSVKGAVSSFQAA 55 Query: 61 NTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 AL+ F S T+T S + FSA+ A+ G Y+I V LAQ Q L + Sbjct: 56 LQALNSPSKFQSVTATASDSAVFSASATSTAVPGTYSIEVATLAQPQKLVAAGQASSSAA 115 Query: 120 AIATSDSKLTIQQG--------------------GDK-DPITIDISAANSSLSGIRDAIN 158 + + +T G GD ITID S N+SL GIRDAIN Sbjct: 116 IGGGTATTVTFDFGTISGGTLANGVYSGASFVSNGDGTKSITIDSS--NNSLLGIRDAIN 173 Query: 159 NAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME 217 AK GV+A+I+N G+G YRL++ ++ G+D ++ +SVSGD A+ S + +D N E Sbjct: 174 AAKIGVAATIVNDGSGSPYRLALAADHNGVDQSLKISVSGDAAIDSLLAHDPGGVQNLTE 233 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 + AAQNA L +N V + +SNTISDA+E +TLNLN VT+ +LT+ +DT+ + +I Sbjct: 234 -TAAAQNANLKINGVTVTKTSNTISDAVEGVTLNLNKVTSSPASLTVARDTNSIKASINS 292 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALL-GDSTLRTIQTQLKSMLSNTVSSS 336 +V AYN L T +++ Y A ++ GA+L GD+T+R++QTQL++M+ V + Sbjct: 293 FVKAYNELSGTLKNVSAYDA--------AAKKGAILQGDATVRSLQTQLRAMIGAPVEGA 344 Query: 337 S--YKTLAQIGITTDPSDGKLELDADKLTAAL 366 KTLA IGIT DG L +D KL+ A+ Sbjct: 345 PGDLKTLASIGITFQ-KDGTLGVDQGKLSTAI 375 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%) Query: 394 LTSW----LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 L SW L + II A TDG+ +++ + K + R+ RY+ QF LD ++ S Sbjct: 585 LNSWASAVLDSDSIISARTDGIDRSIKDVAKRRSEFEARLVNMEKRYRAQFVALDSMLAS 644 Query: 450 LNSTSSYLTQQFEN 463 +N+TS+YLTQQ N Sbjct: 645 MNNTSNYLTQQLAN 658 >UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXZ1_JANMA Length = 672 Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 152/406 (37%), Positives = 233/406 (57%), Gaps = 35/406 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++S++GVGSGL L +L L A+ LT ++ +++S+ AKLSAYGTL AL+ FQ+A Sbjct: 2 AVSTIGVGSGLPLDDLLTKLMTAESQPLTLMAKKEASYQAKLSAYGTLNGALSAFQSAMA 61 Query: 63 ALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTL------------- 108 L K+ F TT + T S T + A G Y I+VT LAQA +L Sbjct: 62 TLGKSSTFDNLQTTVADKTILSGTASTKAATGNYQINVTQLAQAHSLSTAGQTSKTALIG 121 Query: 109 ----TTRTTRDDTKTAIATSDSKL---TIQQGGDKDPITIDISAANSSLSGIRDAINNAK 161 TT T + + T +D K T Q + T+ I ++SL GIRDA+N A Sbjct: 122 SGATTTLTFQFGSITGGTLTDGKYTGATFTQDAKQATGTVTIKNGDNSLQGIRDAVNAAN 181 Query: 162 AGVSASIINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 GV+A++++ G + L TSN TG ++M + V GD ALQS +GYD A + ++ + Sbjct: 182 IGVTATLVSNGSDAPDHLVFTSNKTGAASSMKIDVDGDPALQSLLGYD-PAGTQSLKQNS 240 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 A QN QLTVN +++ +N + +A++ +TLN++ V GN T+TI +DT+ +T++KD++ Sbjct: 241 AGQNTQLTVNGFFVDSQTNEVKEAVQGVTLNVSKV--GNTTMTIAKDTAAVETSVKDFIK 298 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSY 338 AYN L T LT Y D+++++ G L+GDST+RTIQ Q+ LS ++ S++ Sbjct: 299 AYNDLNATIKKLTAY-------DAKTNTGGLLVGDSTVRTIQEQISKTLSASLEGLSNTN 351 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 +L QIGIT DG L +D+ KL+ A++ + + + L GK T Sbjct: 352 MSLPQIGITVQ-RDGTLAVDSAKLSKAMETNYNDIAGLFATVGKAT 396 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 8/108 (7%) Query: 362 LTAALKKDASGVGALIVGD--GKKTGITTTIG-----SNLT-SWLSTTGIIKAATDGVSK 413 L+AA DA+G+ ++G G + I + G + LT S++ + G+I T+ ++ Sbjct: 555 LSAAKGSDAAGLKIEVIGGALGSRGKIDFSQGYADRLNKLTDSFIGSEGLIAGNTNSLNS 614 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + ++T D +A R+ A ARY++QF+ LD L+ S+ +T +YLTQQ Sbjct: 615 DIKRVTDDADAFKIRLTAIEARYRKQFSALDALVASMQTTQNYLTQQL 662 >UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Filament cap protein) (Flagellar cap protein) n=2 Tax=Erwinia pyrifoliae RepID=D0FQ35_ERWPY Length = 489 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 152/488 (31%), Positives = 256/488 (52%), Gaps = 35/488 (7%) Query: 1 MASISSLGVGSG--LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + G+GSG +D SS+LD + A++ L P +++++T ++SA+G + S+L+ Sbjct: 1 MAGFAIPGLGSGGTIDFSSMLDQIKMAEQQKLVPYDKRKTAYTGQVSAWGKISSSLSAL- 59 Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + N + D F + S+ AF AT A Y I V LA+A + T + D T Sbjct: 60 SDNISKMGEDGFHGVNV-STNKAFKATAKAGAQPDSYEIYVEQLARAHKIGTGSQADKTS 118 Query: 119 T----AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 ++ T K+T+ GD +P+ I+++ +SL I IN K V+AS+ G Sbjct: 119 NLGDQSVDTRTLKITV---GDGEPMEIELAKDQTSLEQIAKKINQEKGDVTASVRPTEEG 175 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS----ASSNGMEVSVAAQNAQLTVN 230 + L +TS TG + + + VSGDDAL + +D + A SN M AQNA + ++ Sbjct: 176 GFTLVMTSKKTGEEGQIAVEVSGDDALAGVLDFDPNVQPGAGSNAMSTVTEAQNAIMVID 235 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYN 283 +E SSNTI+DA+E +TL L V+ + + L+IT DTSK + AI+++V YN Sbjct: 236 GTRLERSSNTINDAVEGVTLELQQVSEKDKDGEYAYENLSITSDTSKFKDAIEEFVKLYN 295 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSS-NGALLGDSTLRTIQTQLKSMLS--NTVSSSSYKT 340 + I S + + A A+ +++ NG L+G+ TLR + ++ + N+ S + + Sbjct: 296 AFISASDSASAWNAPTDDAEGEANPGNGPLMGNGTLRRLTNDIRFITGSDNSQLSQVFSS 355 Query: 341 LAQIGITTDPSD---GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 LA++GI D GKL +++ KL A+K + + AL +G G+ GI + + ++ Sbjct: 356 LAKLGIEVKVEDAGTGKLTINSSKLEEAVKNNPDEIEALFLGKGESEGIADKLQEMIKTY 415 Query: 398 L-------STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + TTGII T G+ + +++ + IDA V R ++ F +LD+ M + Sbjct: 416 IGDKDSIPKTTGIIGQTTKGLEEQTKQVSARMSQVQKMIDATVERNRKDFERLDLAMNKM 475 Query: 451 NSTSSYLT 458 N+ SS L+ Sbjct: 476 NNMSSQLS 483 >UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT45_THISH Length = 458 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 157/465 (33%), Positives = 260/465 (55%), Gaps = 27/465 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLG+GSGLDLS++++ L AA++ + + + +++++ A+LSA+G++K L++ +TA Sbjct: 2 AISSLGIGSGLDLSALVNQLVAAERQPVESRLFRREANYQAQLSAFGSIKGGLSSLETAL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L DL + +SS A +A A G+YT+ V LA A+T + DD T Sbjct: 62 GKL--VDLKEGRTASSSDNARLGVSAQESAFPGRYTVRVETLATAETRAS-LAFDDADTV 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 + + L + GD + + I I N++L GIRDAIN ++AGV ASIIN G G RL + Sbjct: 119 VGSGSLSLQV---GDGELVNITIDEDNNTLRGIRDAINASEAGVQASIINDGTG-ARLVL 174 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 TS TG N + L+VS DD + + + +SN ++V AA +AQ +N + + + SNT Sbjct: 175 TSGTTGAANTINLTVSDDDGDDTDLSGLSRLASNNLDVVTAAGDAQAQINGLTVTSPSNT 234 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKA--QTAIKDWVNAYNSLIDTFSSLTKYTAV 298 + A+E +TL L + ++T+ ++A ++AI ++V AYN+++D LT+Y Sbjct: 235 LDGAIEGLTLTLRGESEPGTSITVEVGKNRAAVRSAINEFVTAYNAVVDQVRELTRY--- 291 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSML--SNTVSSSSYKTLAQIGITTDPSDGKLE 356 + ++ L+GDSTLR I+++L S L S + S + L +GI +D +GKL Sbjct: 292 ----NPETQQGAVLVGDSTLRGIRSRLSSGLLASGGEAGSQFTNLVNLGINSD-RNGKLS 346 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 LD+ L AL +D G L+ + +G+ T+ + T G++ A TDG+ + Sbjct: 347 LDSAALDRALDEDFQGAIGLL--NEVSSGLRDTV----KGFTETGGLLDARTDGLLTRIR 400 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + + +R++ AR QF +D L+ L +TS YL+QQ Sbjct: 401 DIDRQREVLDNRMEQFEARLVRQFGAMDALVGQLQNTSQYLSQQL 445 >UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 Tax=Gallionellaceae RepID=C5UZY6_9PROT Length = 477 Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 164/483 (33%), Positives = 267/483 (55%), Gaps = 56/483 (11%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D+++I+ SL A ++ + ++ QQ+S+ AK+S YGT++S + +FQTA AL + S Sbjct: 14 IDVNTIVSSLMAVERLPVNRLNTQQTSYQAKISTYGTMQSQMASFQTAAAALGSSSSSSL 73 Query: 73 T---STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL-------TTRTTRDDTKTAIA 122 +++S T +A+ + A+AG Y ++VT LAQ+Q L +T D T T I Sbjct: 74 LAFKTSSSDTGVLTASASSTAVAGTYALNVTSLAQSQNLVSAGQASSTTAISDGTSTTIN 133 Query: 123 TSDSKL---TIQQGGDKDPIT----------IDISAANSSLSGIRDAINNAKAGVSASII 169 L T+ G P T I I ++N++L GI DAIN A G++A+I+ Sbjct: 134 FDFGTLSGGTLTGGVYTSPATFTSNGTATQSITIDSSNNTLQGISDAINAANIGMTATIV 193 Query: 170 NVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDAS--ASSNGMEVSVAAQNA 225 N G+ YRL++TS TG+ N++ +S SG D L + + D + ++ M +VAAQN+ Sbjct: 194 NDGSSSPYRLTLTSTATGISNSVKISTSGGDGTLDTLLANDPTGLPAAQHMNQTVAAQNS 253 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 TVN +AI N+SNT+++A++ +TLNLN ++ TLTI +DT+ TA+ ++V+AYNS+ Sbjct: 254 NFTVNGIAITNTSNTVTNAMQGVTLNLNTISAAPVTLTIARDTTAVSTAVSNFVSAYNSM 313 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 +S L +A +G+ L GD TLR +QTQ++ + + V+ + + G Sbjct: 314 ---YSMLQTASAYKSGSP--------LAGDPTLRDLQTQMRGIAAGAVTGGTLSAIGDAG 362 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 I+ + G ++LD+ KL+ AL + S V L TG T+ + + L+ G Sbjct: 363 ISFTAA-GVMQLDSAKLSTALSNNYSAVANLF---NSSTGFATSFENMAKNTLAFDGAFA 418 Query: 406 AATDGVSKTLNKLTKDYNAASDRI---DAQVA----RYKEQFTQLDVLMTSLNSTSSYLT 458 T +LN+ K N DRI +A +A RY+ Q++ L+V++ + TSSYLT Sbjct: 419 NRT----ASLNQAVKSNN---DRIGVMEANLANIEKRYRAQYSSLNVMLAEMGKTSSYLT 471 Query: 459 QQF 461 QQ Sbjct: 472 QQL 474 >UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV81_METML Length = 561 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 149/404 (36%), Positives = 239/404 (59%), Gaps = 36/404 (8%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 GVGS LD++SI+ SL + +KA LT I+ Q++++ +++SAYGTLKSAL+TFQT+ ALS Sbjct: 6 GVGSVLDVTSIVSSLMSVEKAPLTKIATQKTAYQSQISAYGTLKSALSTFQTSVNALSSL 65 Query: 68 DLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTT---RTTRDDTKTA--- 120 F+A S TSS T+ +A++ G A G Y I+V+ LA++Q L+ + D T Sbjct: 66 SKFNAQSVTSSNTSVLTASSNGTATVGSYDINVSQLAKSQKLSVGGFSSVSDVVGTGSLT 125 Query: 121 ---------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 +A + + K I I I ++N++L+G+RDAIN A A V+A+I+N Sbjct: 126 ISFGTFTPEVAVPFTASSFAPNTAKSDINITIDSSNNTLAGVRDAINAANASVNATIVND 185 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASS-NGMEVSVA--A 222 G RL +TS DTG N++ ++V+ D S + YD A++ NG ++V A Sbjct: 186 GTTN-RLVITSKDTGEVNSLKIAVTDSDGNNLDASGLSKLAYDPQATAGNGKNLTVLQDA 244 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNA 281 +NA L ++ + I SSN+ISDA++ +TLNL +T GN L++ + +T++ +V+A Sbjct: 245 KNALLKIDGIDIVKSSNSISDAIDGVTLNLLGLTAGNALNLSVATNQDAVKTSVSSFVDA 304 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKT 340 YN L T SLTK+ D +NGALLGDST R++ Q++++++ +++ SS + Sbjct: 305 YNKLDTTLRSLTKF-------DETGQANGALLGDSTARSVINQIRAVMNTAINNGSSVNS 357 Query: 341 LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 L QIG++ DGKL LD+ K +A+ + + + +L + T Sbjct: 358 LTQIGVSFQ-RDGKLSLDSTKFASAVSTNFNDIASLFAASARAT 400 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 50/77 (64%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G +G+ L S LS GI+ A TDG++ ++ +L S R+ A RY+ Q+++LD Sbjct: 479 GYAAKLGTLLDSLLSEDGILAARTDGINTSIKRLDTQSERISSRLTAIEDRYRAQYSRLD 538 Query: 445 VLMTSLNSTSSYLTQQF 461 VL+T++++TS++LTQQ Sbjct: 539 VLLTNMSTTSTFLTQQI 555 >UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z367_9GAMM Length = 493 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 158/500 (31%), Positives = 278/500 (55%), Gaps = 57/500 (11%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+ G+GSG+D+ ++ L A++ + ++ T +SA+GT K +L+ Q++ Sbjct: 2 VSATGLGSGIDIEGLVTGLVNAERVPAEQRLVQREVKVTTLVSAFGTAKGSLSDLQSSIA 61 Query: 63 ALSKADLFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L +S S T+S+++ + + +A A Y + VT+LA+ Q+ + TA Sbjct: 62 ELKSLTTYSKISATSSASSKVAVSATSSAQAASYQVGVTNLAETQSFAS--------TAY 113 Query: 122 A----------------------TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 A T D+ T K + + I+++N++LSGIRDAIN Sbjct: 114 ASTATFGTGTLTLTLGTPTYNGTTPDTYDTFTADSTKTAVNVSITSSNNTLSGIRDAINT 173 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLS-------VSGDD--ALQSFMGYDAS 210 A AGVSAS+I G +RL +T+++TG+ N++ ++ V G D +L SF A+ Sbjct: 174 ADAGVSASLIKDGT-NFRLLLTTDETGVANSVQITSGGISADVGGADVASLSSFDFDTAT 232 Query: 211 ASSNGMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTS 269 +S+G++ + AA+NA ++N +A + ++SNT++DA+ +TL L T + ++T++ + Sbjct: 233 TTSDGLQQTQAAENAAFSINGLAGLTSASNTVTDAVTGVTLTLKATTDTDASITVSANQG 292 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 +AI +V YN ID F+ LT Y A + + GAL GD + R+I + ++S + Sbjct: 293 AITSAIDKFVAGYNGYIDIFNQLTDYNAT-------AKTRGALQGDFSARSIMSNVRSAI 345 Query: 330 SNTVSS--SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG---DGKK- 383 +NTV SY++LA IGI TD + G+L +D+ KL AAL D V + +G Sbjct: 346 ANTVPGLDGSYRSLADIGIVTD-AKGQLSVDSTKLNAALAADPDAVTGMFADTTYNGTAV 404 Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 TG+ + + LT +L++ GI+++ TD +SK+L+++ D + R+D+ ARY+ QF + Sbjct: 405 TGVAARLDTILTDYLASDGILESRTDSLSKSLSRINDDRAVVARRLDSLEARYRAQFNAM 464 Query: 444 DVLMTSLNSTSSYLTQQFEN 463 D L++++ +T +LTQQ +N Sbjct: 465 DSLLSNITATGDFLTQQLKN 484 >UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HZ3_DECAR Length = 452 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 172/486 (35%), Positives = 264/486 (54%), Gaps = 65/486 (13%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+SLG GSGLDL S++ L + +KA L ++ ++S+ K+SA+GTL S L+ QTA Sbjct: 1 MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTA 60 Query: 61 NTALSKADL-------FSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRT 112 AL KA++ F+ STT + T+ ++ TAG A+AG YT++VT LA + + T Sbjct: 61 AQAL-KANIGQTALQKFATYSTTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNT 119 Query: 113 ---------TRDDTKT-AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 T DT T A AT D+ G+ TI + ++N+SL+G+R++IN A Sbjct: 120 VTSTSDPIGTAGDTLTFAFATPDAN------GNSRSKTITLDSSNNSLTGLRNSINGANM 173 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 G++A+II G+ +L V + + GLDN +TL G+ A Q + + A Sbjct: 174 GITATII-TGSAGAQL-VLTGEQGLDNKITL--GGNLASQ-------------LTQTATA 216 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD-TSKAQTAIKDWVNA 281 +A TVN +A +++N S ++ +TLNL TG+ TLT+ + +S TA+ ++ A Sbjct: 217 DSAAFTVNGIAATSNTNAASKVIDGVTLNLTK--TGSTTLTVAAEYSSNLSTALNSFIKA 274 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYK 339 YN T +++ Y A A GAL G+S L+ + Q +S++ T +S+Y+ Sbjct: 275 YNDANSTMATMGAYNATTKVA-------GALQGNSLLQDARQQTRSLVFGTTVGGTSAYQ 327 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI--VGDGKKTGITTTIGSNLTSW 397 L+ IG++ +DG L LD KL AL D V L+ VG T + +G Sbjct: 328 RLSDIGVSVG-TDGSLSLDTTKLNKALASDTVSVATLVDKVGSAFNTTLEQVVG------ 380 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 TTG IK ATD + + +L K +A +D ARY+++FT +D L+ LNSTS+YL Sbjct: 381 --TTGKIKIATDSANSMIKELQKREDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYL 438 Query: 458 TQQFEN 463 T Q N Sbjct: 439 TTQLAN 444 >UniRef50_UPI0001914446 flagellar capping protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. J185 RepID=UPI0001914446 Length = 239 Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 114/238 (47%), Positives = 159/238 (66%), Gaps = 4/238 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS L L +L LT +K LTPI+ QQS+ +AKL+AYGTLKSAL FQTA Sbjct: 1 MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTAL+KADLF +T +S+T +T A AG Y ISVT LA AQ+L T+TT TK Sbjct: 61 NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQ 120 Query: 121 I---ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + + + I+Q G K+P+ I + ++S+ IRDAIN+A +G++ASI+ V E++ Sbjct: 121 LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 L +T+N +G DN M ++V GD L + YD++ ++ M+ V A+NA+L VN + IE Sbjct: 181 LVLTAN-SGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIE 237 >UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUD0_9GAMM Length = 682 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 157/410 (38%), Positives = 225/410 (54%), Gaps = 53/410 (12%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQ----QSSFTAKLSAYGTLKSALTT 56 MA ISSLG+GSGLD+ ++D L AA++A P+ N+ ++ A+LSAYG LKSAL+ Sbjct: 1 MAGISSLGIGSGLDIGGLVDKLVAAEQA---PVQNRLNRREAQVQAELSAYGNLKSALSG 57 Query: 57 FQTANTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQ--------- 106 FQ LS+A F TSS + A + + + A G+ + V LAQ+Q Sbjct: 58 FQDKVQGLSQASDFRVLKATSSNSEAVAVSASSAATVGRLDLEVNQLAQSQAVASAAFAT 117 Query: 107 --------TLTTR--TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDA 156 TLT R T D A+ +Q DK TIDI AA +SL+GIRDA Sbjct: 118 SATPVGSGTLTLRFGTVTTDVDGAVNG------FKQNPDKAVATIDIPAAVNSLAGIRDA 171 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD------ALQSFMGYDAS 210 INNA AGVSASIIN G GE RL + DTG N + V+ DD A S + ++ S Sbjct: 172 INNADAGVSASIINDGVGE-RLIFNTTDTGATNGFVIEVADDDGNNTDAAGLSQLAFNTS 230 Query: 211 ASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSK 270 A+ + + + A Q+AQL VN +A+ +SN I+D +E +TL++ TT + +TQDT Sbjct: 231 ATQS--QQARAGQDAQLIVNGLAVSRASNQITDLIEGLTLSVQATTTSAARIDVTQDTDT 288 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 + I+ +V+A+N L S LT + D++ G L GD+T+R I ++L + + Sbjct: 289 VKEKIQGFVDAFNQLRQQISQLTSF-------DAEKKQGGVLQGDATVRGIDSRLFRLTT 341 Query: 331 NTV---SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 + + S + ++LA +GITT SDG L +D KL+ AL+ VGAL Sbjct: 342 SEIPGLSGRAIRSLADLGITT-ASDGTLAIDDAKLSGALEAHFDEVGALF 390 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 12/148 (8%) Query: 325 LKSMLSNTVSSSSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVGD- 380 L S+ +NT SS + + Q G D DG L + +L AA + A G+ I G Sbjct: 521 LNSVATNTPSSLGFSS-GQTGTGADVEGTIDGAAALGSGRLLAAQEGRADGLKIEITGQS 579 Query: 381 ----GKKT---GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQV 433 G T G++ I + L +L+ G++ + T+ +S+ ++ + +D + + R++ Sbjct: 580 TGPLGTLTFTRGLSDQIDTTLGVYLNGDGLLDSLTESLSERIDAIGEDRDQLAARMEQVR 639 Query: 434 ARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY QF +D L+ LN+T+S+L Q Sbjct: 640 QRYLNQFNAMDALVAQLNTTASFLDNQL 667 >UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 Tax=Ralstonia RepID=B2UJT2_RALPJ Length = 680 Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 147/407 (36%), Positives = 232/407 (57%), Gaps = 34/407 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + IS G+G+ +D+++++ SL + LT + NQQSS+ +LSA GTLKSAL+TFQTA Sbjct: 13 VPPISIPGIGTSIDVNTLVSSLMKVESQPLTLLQNQQSSYQTQLSAVGTLKSALSTFQTA 72 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + L+ A +SA + T+ SA+ A AG Y ++V+ LAQ+Q L + + T T Sbjct: 73 LSNLTTASNYSAMKASGYDTSVLSASVTSAAAAGSYAVNVSQLAQSQVLAAQ-GQTSTTT 131 Query: 120 AIAT------------------SDSKL---TIQQGGDKDPITIDISAANSSLSGIRDAIN 158 AI + S+ K T Q G +I I+++N++L+GIRDAIN Sbjct: 132 AIGSGTSTTVSFSFGTVSGGTFSNGKYSGATFTQNGSLAGGSITINSSNNTLAGIRDAIN 191 Query: 159 NAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME 217 +A GVSASI+N G+G YRL +TS G ++ M +SVSGD LQS + D + + N E Sbjct: 192 SANLGVSASIVNDGSGNPYRLVLTSTAGGSNSEMKISVSGDSTLQSLLAQDPAGTQNMTE 251 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 V+ QNA T+N +A+++ +NT+S+ + + L TG+ T+T+ D + A+ Sbjct: 252 VTT-GQNALATINGIAVQSPTNTLSNVVTGTSFTL--AKTGSTTVTVANDPTATTNAVNS 308 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS 337 +VN YN+L ++LT +D S S++NG L GD + +T+ Q+ +L + + + Sbjct: 309 FVNGYNALRTQLNTLTN---ID---TSNSANNGPLAGDVSTKTLINQITDVLGQAIGTGT 362 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 Y++L +G+T + +DG L +D KL+AA+ S V L G G T Sbjct: 363 YQSLGSVGVTMN-ADGTLSVDNTKLSAAIAASPSQVTGLFAGTGTAT 408 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 T+ LS++G+++ TD ++ +L+ L + R+D + A Y QF L L+ S+ +TS Sbjct: 604 TNLLSSSGMVQNETDAINNSLSSLASQISVMQTRLDNKQALYYAQFNALSALVASMTNTS 663 Query: 455 SYLTQQF 461 +YLT Q Sbjct: 664 TYLTTQL 670 >UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID1_PSEAE Length = 478 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 156/473 (32%), Positives = 247/473 (52%), Gaps = 36/473 (7%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G SGLD+ +I+ +L AA+KA + +S TAK + G LKSA++ QT L+K Sbjct: 9 GYNSGLDIKNIVSTLVAAEKAPKEAQLKRLESDTTAKFTGIGQLKSAISDLQTILKELNK 68 Query: 67 ADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD 125 +LF S ++S F+ TA +A+ G Y + VT LA + T + D KT TS Sbjct: 69 PELFQKRSASTSDEKFATATATKDALPGIYKLEVTQLASVSKVATASFADGYKT---TSG 125 Query: 126 SKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIIN-VGNGEYRLSVTS 182 LTI+QG D +T+++ AA ++L+ +RD++N G++A+I+N G+G RL T Sbjct: 126 GTLTIKQGADDAGVTVNV-AAGATLAEVRDSLNAQLKDKGITANIVNNPGDGTSRLVFTG 184 Query: 183 NDTGLDNAMTLSVSGDDALQSF----MGYDA----------SASSNGMEVSVAAQNAQLT 228 D+G + V G L++F +G D S+SS+G A+NA+ + Sbjct: 185 KDSGA--GKDVFVQGSSGLENFNIGSVGADGKLTLSQLDGTSSSSSGY--ITQAKNAKFS 240 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLI 286 ++ + +E+ +NT+ + +T L VT N+ +TI+ QD + IK +V AYN L+ Sbjct: 241 IDGLTLESPTNTVDKVINGVTFELKTVTDTNKPITISVEQDRGGVKDNIKKFVEAYNKLV 300 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 S LT T V D ++ GAL+GDS++R + T +++ + + + LA +GI Sbjct: 301 GVTSELTGVTKV---GDDKAPVVGALVGDSSVRNLLTTMRNEMVQPGQGTDVRMLADMGI 357 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 TT DG LE+D KL LK V AL GD TG+ + LT + T G+++ Sbjct: 358 TTK-KDGTLEIDDKKLDKVLKDKFESVSALFTGD---TGLMKRLDDKLTPYTQTGGVLQQ 413 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 DG+ T+ + A + R++ R +QFT +D L+ LN TS + Q Sbjct: 414 RLDGLQDTIKSVDTQREALNRRVEQLQDRLLKQFTAMDQLIGQLNQTSGRMAQ 466 >UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitrosococcus oceani ATCC 19707 RepID=Q3J8M3_NITOC Length = 677 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 141/405 (34%), Positives = 220/405 (54%), Gaps = 39/405 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I+S G+GSGLD+ S+++ L AA+ + ++ Q++ A LSA GTLKS L +F+ A + Sbjct: 2 ITSTGIGSGLDVESLVNQLVAAEGRPQQLRLNRQEAKMQATLSAMGTLKSELASFKDAVS 61 Query: 63 ALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L F A ++ + +A+ A A G Y++ V LAQAQ L ++ D ++ Sbjct: 62 KLDSPSAFQAIKASVGNRDLLTASAAAKAATGTYSVEVQQLAQAQKLASKAFAD---SSA 118 Query: 122 ATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 A L+ + G D+ + I +A++SLSGIRDA+N A GV A+II Sbjct: 119 ALGTGTLSFRFGSYDNNTNTFTGNPDRTAQIVTIDSAHNSLSGIRDAVNEADIGVQANII 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNG----MEVS 219 N G G+ RL T+ GL N++ ++VS +D S + YD + + +G + + Sbjct: 179 NDGTGD-RLVFTAQTMGLANSLEITVSDEDGNNLDESGLSQLAYDPTGADSGSGKSLTET 237 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDW 278 VAAQ+A+L V+ + + NTI+ +E +TL LN + TLT+ D A ++ + Sbjct: 238 VAAQDARLVVDGLTVTRPQNTITGMIEGVTLELNSAELDSPTTLTVAADGHIASKSVNGF 297 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SS 336 V A+NSL T +SL+ Y + ++ G LLGD++LR I+ +L+ + S+TV+ S Sbjct: 298 VEAFNSLAKTLNSLSSY-------NPETQEKGPLLGDASLRGIENRLRRVASDTVTGLSG 350 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDG 381 Y+TLA IGITT DG L+LD KL ++ D V L G G Sbjct: 351 PYRTLADIGITTQ-RDGTLKLDESKLQQVVESDPEAVARLFTGGG 394 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ + + L L + G ++ DG++ + ++ R+DA RY+ QFT LD Sbjct: 592 GVAAHLNTYLDQVLDSEGFLENRIDGLNHRIGDFSEQREDLVQRLDAIEKRYRAQFTVLD 651 Query: 445 VLMTSLNSTSSYLTQQFEN 463 L+ L +TSS+L+QQ N Sbjct: 652 SLLGQLQTTSSFLSQQIAN 670 >UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 Tax=Gammaproteobacteria RepID=Q0AAT0_ALHEH Length = 477 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 149/487 (30%), Positives = 241/487 (49%), Gaps = 42/487 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASISSLGVGSGLD+ ++D L AA++ + Q+S A++S G L+ A+T F Sbjct: 1 MASISSLGVGSGLDIRDLVDQLVAAERQPGQNRLDRQESRLEAQISGLGRLQQAITDFGG 60 Query: 60 ANTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT-TRDDT 117 A +S ++D S +T+++ +A S + +A G Y ++VT LAQAQ L T + +D Sbjct: 61 ALGNVSAESDFRSVVATSNNESAVSVSAGRDAPPGSYDVNVTQLAQAQRLATNSDLFEDV 120 Query: 118 K------TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 + T++ T + Q G + T + +L +R AINN V AS+++ Sbjct: 121 EDFSAGTTSLGTGSFTIEYQDGSAE---TFQLEEGADTLQDVRAAINNQSENVRASVVDD 177 Query: 172 GNGEYRLSVTSNDTGLDNAMT-----LSVSGDDALQSFMGYDASASSNGMEVSV------ 220 G G RL +TS +TG NA++ D L + +DA + E V Sbjct: 178 GEGP-RLVITSRETGDQNAVSAITVDPDDPDSDPLLERLAFDAENLAEPDEDGVRAGDNF 236 Query: 221 ----AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 AAQ+A+L V+ + I N IS ++ +TL L+ V + + + ++ A +A+ Sbjct: 237 SQLRAAQDAELFVDGLRITRPGNEISGVIDGVTLTLSAVDSAR--INVAEEPGSAASAVS 294 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 D+V AYNSL T L + D +S G L GDSTLR++Q +L+ M+S + + Sbjct: 295 DFVGAYNSLQRTLGELNAF-------DPESGEAGELKGDSTLRSVQARLRQMISEPLPGA 347 Query: 337 --SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 +TLA +GITT DG LE++ +L AL ++ V L ++ G+ + + Sbjct: 348 GGPVQTLADLGITTR-RDGTLEINDARLDDALSENRLDVIRLFT--DEENGLAARLQGAV 404 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 + +I + T+ + L L R+D AR QF+ +D ++ +N TS Sbjct: 405 DEFTGRDSVINSRTESLQDRLAALAPQQERLDRRMDQLEARLIRQFSAMDSMIAQMNQTS 464 Query: 455 SYLTQQF 461 +L Q Sbjct: 465 EFLDNQL 471 >UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y379_LEPCP Length = 479 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 158/490 (32%), Positives = 268/490 (54%), Gaps = 44/490 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISS G+GSGLD+SSI+ L A +K+ L + + S +KLSAYG ++S ++ + A Sbjct: 1 MASISSAGIGSGLDVSSIVTQLMAVEKSPLQQMQTEASKIQSKLSAYGKVQSYVSALRDA 60 Query: 61 NTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+K+D + +T+ +S + F+ATTA A AG Y+++V +A AQT+ + T Sbjct: 61 ALNLTKSDTWGSTTASSGDASVFTATTASGATAGNYSLTVQQMASAQTVASAAWPASVST 120 Query: 120 A-----------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 A + T + G +T+ AA+ +L+ +RD IN AK+GV ASI Sbjct: 121 VGSGVLRLELGTWAAGQTGFTPKSGTSSVDVTV---AASDTLADVRDKINAAKSGVMASI 177 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNGMEVSVAA 222 +N +G RL + S++TG +NA ++ + DD S + +D SA +N M S AA Sbjct: 178 VNDTSGS-RLVLRSSETGAENAFRVTATDDDGNNTDASGLSALAFDPSAGANAMVQSQAA 236 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 NA+ T+N +++ ++SN ++D ++ +T+ L V++ L+++ +T +TA+ + +AY Sbjct: 237 VNARATINGLSVSSASNLLTDVVDGVTIKLGKVSSTPVDLSVSSNTESVKTAVTAFADAY 296 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTL 341 N+L + TKY A + S L GDS +++ +++++ T + ++ L Sbjct: 297 NNLSKYLAEQTKYNAA-------AKSGATLQGDSGTNALRSAMRNIIGGTSGVTGAFNRL 349 Query: 342 AQIGITTDP-SDGKLELDADKLTAALKKDASGVGALI----VGDGKKTGITTTIGSNLTS 396 AQ+G+ DP SDG L++D+ KLT++L K A + AL G+ G ++ S Sbjct: 350 AQVGL--DPQSDGTLKVDSTKLTSSLGKLAD-LKALFANKDAGNEANNGFAVSLQKWGDS 406 Query: 397 WLSTTGIIKAATDGVSKTLN---KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 LS G + + + + ++ K +D+N +R+ AR + Q+T LD M LN Sbjct: 407 LLSFDGSLSTRSSSLQRQIDANAKKQEDFN---ERMTGVEARIRAQYTALDTQMAKLNGL 463 Query: 454 SSYLTQQFEN 463 S+Y+TQQ N Sbjct: 464 STYMTQQITN 473 >UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT6_METFK Length = 668 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 158/443 (35%), Positives = 251/443 (56%), Gaps = 44/443 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS S + + D+ SI+ SL A ++ LT +S Q++S+ +K+SAY TL+S+L++FQTA Sbjct: 1 MASTSGISASTNFDIDSIVSSLMAVEQKPLTLLSQQKTSYQSKISAYATLQSSLSSFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + F+ S TS +A F+AT++G+A Y I V LAQ+ + T + +T Sbjct: 61 LANLSTSSKFNVQSATSGDSAVFTATSSGSATVSNYAIKVGQLAQSHKVAT-SNFSNTSA 119 Query: 120 AIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 A+ T +TI G DK ++ ISA+N+SL+GIRDAIN GV+A+ Sbjct: 120 AVGT--GTITIALGTYDEATNTFTANPDKAAKSVTISASNNSLAGIRDAINAGDMGVTAT 177 Query: 168 IINVG-NGEYRLSVTSNDTGLDNAMTLSVS---GD----DALQSFMGYDASASS----NG 215 I+N G +G RL +TS ++G N++ +S++ GD D L S + YD +A+S N Sbjct: 178 IVNDGQSGGGRLVLTSKESGEVNSIKVSIADADGDNTDSDGL-SRLAYDPAAASGAGKNL 236 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 +E+ A+NA+L ++ + +E++SN ++ L ITLNL + ++ + +K TAI Sbjct: 237 VELQ-EARNAKLNIDGIDVESASNVVTGVLSGITLNLFKASPDT---AVSLNVTKNVTAI 292 Query: 276 KD----WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 KD +VNA+N++ T +LTK+ D+ + NGALLGD+T R+I +Q+K L+ Sbjct: 293 KDSVTAFVNAFNAVNTTLRNLTKFD--DSTTTAADRKNGALLGDATARSISSQIKMALTK 350 Query: 332 TVSSS-SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT-- 388 +V + ++ +L+QIG+ DG L LD+ KL A++ + V L G + + T Sbjct: 351 SVGGTDNFSSLSQIGVAIQ-RDGSLALDSSKLEKAIETNLDDVAKLFAAVGSASDVETRF 409 Query: 389 -TIGSNLTSWLSTTGIIKAATDG 410 T GS I +AAT G Sbjct: 410 VTQGSKTQPGNYAINITQAATRG 432 Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 43/65 (66%) Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 ++S TG++ + TDG+ ++ ++TK A R+ A ARY+ QF LDVLMT + +T SY Sbjct: 597 FVSDTGLLASRTDGLQDSIKRVTKQEEAIQVRLAAVEARYRAQFVALDVLMTQMQTTQSY 656 Query: 457 LTQQF 461 LTQQ Sbjct: 657 LTQQL 661 >UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BQ50_DELAS Length = 473 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 166/488 (34%), Positives = 255/488 (52%), Gaps = 49/488 (10%) Query: 1 MASISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA++SS G+ GSGLD +++ L A Q+ +L P+ + S +K+S +G +KS ++T Q Sbjct: 1 MATLSSAGISGSGLD-ETMIAKLVALQRQSLVPLQQKASVLDSKISTFGQIKSLMSTLQD 59 Query: 60 ANTALSKADLFSAT--STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 A T+L+ AD + T +TT+S A S T A NA+ G ISV LA++Q++ T DT Sbjct: 60 AATSLANADTWRLTNAATTNSAVAVSVTDA-NALPGSSVISVNKLARSQSVATGIMPKDT 118 Query: 118 KTAIATSDSKLTIQQGG----------DKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 + KLTI G P+ IDI AA + L + AIN+ AGV AS Sbjct: 119 QFGAG----KLTITMGAWNANGTQFSNPGTPLDIDI-AAGAKLEDVVQAINSKGAGVVAS 173 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 ++ GE RL + S TG D+ T+ SGD +L S + ++ +A+S V+ AQNA+L Sbjct: 174 VLKDAQGE-RLVLRSRSTGADSGFTVDASGDSSL-SALAFNGAATSG--SVAQYAQNAEL 229 Query: 228 TVNNVAIENSSNTISDALE--NITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 TVN + +++++N L NIT+N T+T++ DT + I+ +++AYN+L Sbjct: 230 TVNGITVQSTTNEFKQTLPGLNITVNQETAPATPVTVTVSSDTDGMKKKIQAFMDAYNAL 289 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQ 343 D SS TKY D++S G L GDST + L+S++S TV + + K L+ Sbjct: 290 NDALSSSTKY-------DAESKVAGLLQGDSTTVGMTNSLRSVVSGTVDGGADTLKRLSD 342 Query: 344 IGITTDPSDGKLEL-----DADKLTAALK--KDASGVGALIVGDGKKTGITTTIGSNLTS 396 +GI GKL D KL AALK + S + A + DG+ T + + + Sbjct: 343 MGIQIQKG-GKLAYGTTASDKTKLDAALKDPESMSKMFAAVGTDGQPN--TQGLAARMKD 399 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQV----ARYKEQFTQLDVLMTSLNS 452 + D SK+L +L K + DRI+ Q R +EQ+ LD M+ ++ Sbjct: 400 FTRKALEFDGTFDTKSKSLQELKKSNGKSQDRINDQADSLEKRLREQYASLDKKMSGYSA 459 Query: 453 TSSYLTQQ 460 S+Y+ QQ Sbjct: 460 LSAYMNQQ 467 >UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betaproteobacteria RepID=Q2Y9C9_NITMU Length = 669 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 141/403 (34%), Positives = 226/403 (56%), Gaps = 42/403 (10%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +I++ G GS LD++ I+ L AA++ L + ++S + AKLSAYGTLK AL+ FQTA Sbjct: 2 AITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQ 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTA---GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ ++A S +++ ++ T G A+ G Y++ V LAQ Q + + + T Sbjct: 62 GLADPAKYNAVSASAADSSLLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSST 121 Query: 120 AIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 LTIQ G K TI I ++++LSG+RDAIN A AGVSA+ Sbjct: 122 ---VGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTLSGVRDAINAANAGVSAT 178 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDAS----ASSNGME 217 I+N G G +L +T+ D G +++ ++VS DD S + +D + + N ++ Sbjct: 179 IVNDGAGN-KLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQ 237 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIK 276 V AAQ+A+L ++ + I SSNTI+DA+E +TL+L G+ TL ++ DT+ A+TA++ Sbjct: 238 VQ-AAQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVE 296 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALL-GDSTLRTIQTQLKSMLSNTVS- 334 +V +YNS+ T S+L+ Y + GA GA+L GDS +IQ ++S L+ + Sbjct: 297 AFVKSYNSINQTLSNLSAY---NPGAK-----KGAILQGDSAAFSIQRGIRSALTAMMGD 348 Query: 335 SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 S + +L+QIG+T DG L +D+ KL A++ +G L Sbjct: 349 SRGFTSLSQIGVTLQ-KDGSLAVDSAKLQASMDTGFEQIGRLF 390 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 +L+T G+I +G++ ++ L + S R++ ARY+ QF+ LD ++ SL TS + Sbjct: 596 FLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSALDAMLGSLTQTSQF 655 Query: 457 LTQQF 461 L QQ Sbjct: 656 LQQQL 660 >UniRef50_C5A8U2 FliD n=2 Tax=Burkholderia glumae RepID=C5A8U2_BURGB Length = 518 Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 160/479 (33%), Positives = 264/479 (55%), Gaps = 50/479 (10%) Query: 15 LSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSAT 73 ++++++S TAAQ + L T I+ Q+ K AY L++ALTT Q++ T LS Sbjct: 45 VTALVNSKTAAQASLLSTAIAQNQN----KSQAYTALQTALTTLQSSLTTLSDGSFAQTF 100 Query: 74 STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQG 133 + T+S T +AT A+AG Y I VT +AQ+Q+L++ + + T LT+ Sbjct: 101 TATASGTGLTATAGSGAVAGTYQIGVTQIAQSQSLSSPAFGANKQLGAGT----LTLSIN 156 Query: 134 GDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAM 191 G T++I++ N++L+GI+DAINNA GV+A+I+N +G + L ++S ++G NA+ Sbjct: 157 GKSS--TVNINSNNNTLAGIKDAINNASDNPGVTATIVNGADGAH-LVLSSANSGAANAI 213 Query: 192 TLSVSG--DDALQSFMGYDASASSNGMEVSV---------------AAQNAQLTVNNVAI 234 ++SV+ D+ L S +G + +S+ G + ++ AAQ+AQ TV +A Sbjct: 214 SVSVNATTDNGL-SELGVTSKSSTTGGQSTITSAGTTAATSWTQSTAAQDAQFTVGGIAN 272 Query: 235 ENSSNTISDALENITLNLND--VTTG----NQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 +++NT++ A+ +TLNL V+T QTLTI DT+K AI +V YN+L+ Sbjct: 273 SSATNTVTSAIAGVTLNLTQAAVSTATPATTQTLTIAADTTKQTAAITTFVQNYNALVTA 332 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY-KTLAQIGIT 347 ++ Y+ A S + + G L GDS L +IQTQL SML +VSS+ TL+ +GI+ Sbjct: 333 MQTVGSYSTT---AGSSTPTVGTLFGDSALNSIQTQLSSMLGGSVSSNGVTATLSSLGIS 389 Query: 348 -TDPSDGK----LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 +D SDG L ++ LT L GV A + G+ + + +TS +ST G Sbjct: 390 VSDGSDGATAGDLVINQATLTTTLSSKP-GVAASLFNS--TNGLGAKMNNAITSIMSTHG 446 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + + V+ TL L+ +A + +Y QFTQL+ ++ ++ + +YLTQ F Sbjct: 447 VLTQSENSVTSTLTSLSSQQSALAAYAKTLTTQYNAQFTQLNTVLAAMTTNQNYLTQLF 505 >UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2 Tax=Photobacterium profundum RepID=Q6LTP9_PHOPR Length = 457 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 136/464 (29%), Positives = 233/464 (50%), Gaps = 38/464 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTP----ISNQQSSFTAKLSAYGTLKSALTTFQ 58 +I + G SGLD++S++ S+ A++ TP I+ Q+ LSAYG LK +L T + Sbjct: 2 NIGAAGTASGLDINSMVKSIVDAER---TPKESRINQQRDQVDVSLSAYGKLKGSLDTMK 58 Query: 59 TANTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + D+ SA S + + +A + AI GKYT++V LAQ+ + + + D Sbjct: 59 NLMADFRRNDVMSARSVSIDNDEVLAANVSSEAIPGKYTVNVQQLAQSHKIVSSSF--DE 116 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGE 175 K I KL++ GG P T+DI A S + + IN A GV AS+I NG Sbjct: 117 KEKIGAG--KLSMALGGK--PFTVDIPADESKILDVVRLINRAPDNPGVMASVIKDDNGA 172 Query: 176 YRLSVTSNDTGLDNAMTLSVSGD--DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 RL + S+ TG N++ +++ LQ F G++ + +N M A ++++ ++ +A Sbjct: 173 -RLVLASDKTGEQNSIKVNIDAPAFSTLQKF-GFNINNDANSMREMQPAVDSRVLIDGLA 230 Query: 234 -IENSSNTISDALENITLNLNDVTTGNQT----LTITQDTSKAQTAIKDWVNAYNSLIDT 288 + +S+N+I DA+ + ++L +T G +T + + D ++ +I+ +VNAYN D Sbjct: 231 SVTSSTNSIEDAINGVDIDLKKLTDGVETPDVVVNVGYDRNQVGGSIEQFVNAYNQFFDV 290 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGI 346 L ++ D +S G L+GDS +R+I QL+ +N V + S +TL+++GI Sbjct: 291 SQELGRF-------DPESKEKGPLVGDSIIRSITNQLRGAFANPVEGAPESIQTLSELGI 343 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 TT G+LE+D D L ++ + VG G + G I + S+ TG IK Sbjct: 344 TTTMG-GRLEVDYDIFDKQLDQNFNDVGEFF---GDQNGFARRIEDLIHSYTGITGSIKG 399 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + ++ + +L D R++ R +QF +D M + Sbjct: 400 RENSLNDQVMRLNTDQTNLDRRMEGVKQRTHDQFVAMDAAMGQM 443 >UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCW2_HAHCH Length = 656 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 137/412 (33%), Positives = 235/412 (57%), Gaps = 35/412 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS+SS+G+GSG+ S +++ L +A++ T + ++ TAKLS LKSA+T + Sbjct: 1 MASVSSIGIGSGVLTSDLIEQLASAEREPTEKRLDLKEDEVTAKLSDLSRLKSAITDLRL 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + LS + S+ + TSS ++ T +A G Y ++V++LA AQ+L++ T D T Sbjct: 61 SARTLSTPESMSSNTATSSGSSIGVTANTSAKTGSYALTVSNLAVAQSLSSGTFADKDTT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + T T+ GG + +T+D ++N++L G+ DAIN+ V++S+I G+ Y+L Sbjct: 121 TVGTGTLSFTV--GGVTENLTVD--SSNNTLQGLSDAINDMGLDVNSSVIYNGS-SYQLV 175 Query: 180 VTSNDTGLDNAMTLSVSGDDA-------LQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 ++++ TGL NA+++S + +D + F+ Y+A+ + + VAA++A T+N V Sbjct: 176 LSASKTGLANAISISATDNDGNSTDASGISQFI-YNAT--NQNLTQDVAAEDAAFTLNGV 232 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 AI S NT+ D ++ +TL LN T +T+++D + ++D V+ YN+L + + + Sbjct: 233 AITRSLNTVDDVVDGLTLTLNAETASAVNVTVSKDLNAVTERVQDLVDKYNALQEIINEV 292 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIGITTD 349 T + DS + G LLG ST+RTI TQL+S LS+ V SS+ ++L+++GITT+ Sbjct: 293 TAF-------DSDTGEKGTLLGSSTVRTISTQLRSTLSSIVPGLESSNVRSLSELGITTN 345 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKT---------GITTTIGS 392 G+LE ++ + L+ + V AL G+ T GI T IGS Sbjct: 346 SESGQLEFNSLTFQSKLQSYPNDVAALFADQGRTTDAQVKYVSAGINTKIGS 397 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 40/67 (59%) Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 S+LS+ G+I A +G + L K+++D DRI A R QFT D++++ L +T + Sbjct: 579 SYLSSEGLITVAINGFNSQLEKISEDRTELDDRITALTDRLARQFTAADLIISQLKNTEN 638 Query: 456 YLTQQFE 462 +L+ Q E Sbjct: 639 FLSTQLE 645 >UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNY5_9GAMM Length = 452 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 139/468 (29%), Positives = 250/468 (53%), Gaps = 33/468 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLGVGSGLDL+ ++ L AA++ NQ + A++SA+G L S++ + Sbjct: 2 AISSLGVGSGLDLNQLVGQLVAAEREPKEQRLNQREERIDAQISAFGELTSSVDQVGSVL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT----TRDDT 117 LS + + S + A + T G+A +++ V LAQ+Q + + + DD Sbjct: 62 GDLSGFEPTQSASVADDSVA-NVTVTGDAENSDFSLEVNQLAQSQIVASAAGDFDSADDE 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 A +L IQ G + + +TID+ ++L +R+AIN+++AGV+ASI+N GNG R Sbjct: 121 VGA-----GQLQIQVG-NGNAVTIDVEEG-ATLRDVRNAINDSEAGVTASIVNDGNG-AR 172 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +++N+TG DN ++++ + D D SSN E AAQ+A+ +N + + +S Sbjct: 173 LVLSANETGADNTISVTATEDPEGSGLGRLD---SSNLTETR-AAQDAEAVINGLTVTSS 228 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 SNT+SD +E + + L V++G T+++++D + ++ ++ +V YN+LI + LT Y Sbjct: 229 SNTLSDTIEGLEIELTGVSSGPTTVSVSEDRDELESLLQSFVENYNALIGQTNQLTAY-- 286 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDPSDGKL 355 D + L GDST+R I+++L + L + S +TLA++GI ++ DG L Sbjct: 287 -----DPEEDEAAVLTGDSTVRGIRSRLGNALIQPAEGAGGSNQTLAELGIISN-RDGTL 340 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 D+ + + A+++D G + D + I + S+ G+I+ DG+ L Sbjct: 341 SFDSTRFSEAMERD----GFENISDTVRN-IAGQMRDVTDSFTGRDGLIQVRQDGLQSDL 395 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 +++ + RI+ A + QF+++D ++ + +T L Q N Sbjct: 396 SRIERQREDLEARIERLEANWVRQFSRMDSMVAQMQATGDQLMAQLAN 443 >UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 Tax=Marinobacter RepID=A1U3U6_MARAV Length = 657 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 149/442 (33%), Positives = 234/442 (52%), Gaps = 52/442 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAK----LSAYGTLKSALTT 56 MA+IS+LG+GSG+ S ++D L A++A P N+ + T K +SAYGTLKSA+T Sbjct: 1 MANISALGIGSGVLNSDLVDQLVEAERA---PTENRLDTRTQKAELLISAYGTLKSAITE 57 Query: 57 FQTANTALSKADLFSATSTTSSTTAFSATT-AGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 + LS D A S TSS S T + A G Y ++V LAQ+Q+L + T D Sbjct: 58 LRLPMRQLSAPDNLKAFSATSSNEDVSVTVDSTKASRGTYNVNVLSLAQSQSLASSTFAD 117 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 T++ T TI G +TID +N++L G+ D IN A GVSA +I+ G+G Sbjct: 118 RDSTSVGTG--SFTISSGDKSATLTID--GSNNTLQGLADEINEAGIGVSAGVIDTGSG- 172 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDA-------LQSFMGYDASASSNGMEVSVAAQNAQLT 228 +RL ++S +TG NA+++SV+ DD L F+ D ++ M+ ++AA++A++ Sbjct: 173 FRLVLSSEETGEANAISVSVTDDDGNNDDAAGLSQFVFND---TTQNMQETIAAKDARVE 229 Query: 229 VNNVAIENSSNTISDALENITLNL--NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 +N + I S+N+ +D ++ ++ VT+ T+ + QD + +V +N+L Sbjct: 230 INGIEITRSTNSFTDVIDGLSFEAKAEGVTS---TIKVEQDFGAVADRVGAFVEKFNALQ 286 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQ 343 T L+ + A ++ G L GD+T+R+IQ QL+++L V ++S +TLA Sbjct: 287 TTIKGLSGFNA-------ETGQGGILSGDTTIRSIQAQLRNVLGRVVPGLENASIRTLAD 339 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK---------KTGITTTIGS-- 392 +GITTD G L D K LKK+ V AL G+ +G TT G+ Sbjct: 340 VGITTDYETGGLSFDRAKFEEQLKKNPDDVTALFAEQGRTSSADVEFLGSGSGTTRGNYA 399 Query: 393 -NLTSWLSTTGII--KAATDGV 411 N+T + G++ A TDGV Sbjct: 400 INITQAATQGGVLGDSALTDGV 421 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 +T + GI+ A TD +S+ L ++ ++ DRI + R QFT D L++ LNST Sbjct: 579 VTDIVGADGILDAKTDSLSRDLERIQEERIRLEDRIASYRERLVSQFTAADSLISQLNST 638 Query: 454 SSYLTQQF-----ENNSN 466 YLTQQ +NNSN Sbjct: 639 GDYLTQQLAALAPQNNSN 656 >UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Reinekea blandensis MED297 RepID=A4BEP0_9GAMM Length = 1303 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 138/434 (31%), Positives = 241/434 (55%), Gaps = 33/434 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA I SLG+GSGL S +++ L A++A + + + + AK++AY +++ L + Sbjct: 1 MAGIQSLGIGSGLLTSELVEQLVEAERAASDLRLDTRTARVEAKITAYAEVRNMLDGLSS 60 Query: 60 ANTALSKA-DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR--TTRDD 116 + ++LS+A + S+++T+S+ + +A+T+ A G Y I+V +A++ +L ++ + DD Sbjct: 61 SISSLSQAATIQSSSATSSNDSVLTASTSSTAEPGSYRINVDEIAKSHSLASKQYNSVDD 120 Query: 117 T-----------KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T T T +S L+ +Q D + +I+I++ N++L G+RDAINNA GVS Sbjct: 121 TIGTGTLTFKFGTTNYDTDNSYLSFEQSADSEVTSIEINSENNTLGGVRDAINNADFGVS 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG--MEVSVAAQ 223 AS++ G G YRL +TS++TG + +M ++ SGD LQ+ + Y+ + ++ G ME + Sbjct: 181 ASVVYDGTG-YRLLLTSDETGEETSMEITASGDAGLQA-LAYNGAQNTAGTNMEETQKGS 238 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 +A + +N +AI ++ N++ ++ +T+NL + + TL +++D S I +V YN Sbjct: 239 DASVRINGLAITSTDNSLDQVIKGVTINLTETSDSAVTLNVSRDVSDIADKIDTFVEKYN 298 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKT 340 + LTKY D G LLGD+ LRT+QTQL++ +S + + SSY + Sbjct: 299 EYKGLYDELTKY-------DPSDEIGGILLGDNVLRTVQTQLRAGISEVITGLTGSSYSS 351 Query: 341 LAQIGITTDPSDG-KLELDADKLTAALKKDASGVGALIVGDGKKTGI---TTTIGSNLTS 396 + +IG++TD +D L + K A+ DA V L+ D + + T+G N Sbjct: 352 MIEIGLSTDQNDDFNLVFNRAKFEEAMANDAKSVVGLLATDKQASDAQISVVTVGPNTQP 411 Query: 397 WLSTTGIIKAATDG 410 I KAAT G Sbjct: 412 GSYDVNITKAATQG 425 >UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKQ6_9BURK Length = 523 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 162/480 (33%), Positives = 248/480 (51%), Gaps = 52/480 (10%) Query: 15 LSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATS 74 ++++++S TA Q AT I+ +Q++ +SAYGTL + L+ Q A LS + Sbjct: 49 VTALVNSKTAGQAAT---IAAEQTADNTLISAYGTLSAGLSALQAAILPLSDGQTLNTFK 105 Query: 75 TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGG 134 +T S T +AT A+AG Y+++V +A +Q LT+ T A + LT+ Sbjct: 106 STLSGTGVTATATTGAVAGSYSLNVAQVATSQVLTSAGYNASTNLASGAATMTLTV---- 161 Query: 135 DKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTG------ 186 + TI ++++NS+++GI AIN+A GV+A+++ +G + L + SN TG Sbjct: 162 NGKSSTISLNSSNSTIAGIASAINSANDNPGVTATVVTGADGAH-LVLQSNSTGASGGIS 220 Query: 187 -----------LDNAMTLSVSG------------DDALQSFMGYDASASSNGMEVSVAAQ 223 L+ + +G D + ++ ++ S +G + AAQ Sbjct: 221 ISVSDSTSSDDLNKLAVATTAGKSISSASDLTATDSSGNTYNPSQSTISGSGWTQTQAAQ 280 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAY 282 ++ T+ V + +S+N + AL +TLNL G QTLTI QDTS QTAI ++V Y Sbjct: 281 DSYFTLGGVGVSSSTNAVKTALSGVTLNLTSAAVGTTQTLTIAQDTSAEQTAIDNFVTVY 340 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-TL 341 N+L+ T SLT Y + S+S G LLGDSTL IQ QL ++ + V S S K TL Sbjct: 341 NTLVTTMGSLTSY-------NKNSTSQGVLLGDSTLSVIQNQLAKIVGSGVGSGSTKTTL 393 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 A IGIT SDG L +D KL AL+ + S V ++ TGI + ++T++ S T Sbjct: 394 AAIGITLQ-SDGTLSVDDTKLGDALQNNQSAVASVF---NPTTGIAAQLDDSITNYTSPT 449 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 GIIK TD ++ L L + ++Y QFT LD LM ++N+ S YLTQ F Sbjct: 450 GIIKNRTDAINSDLASLANQQTTLTAWQAQLTSQYTAQFTALDKLMATMNNNSQYLTQLF 509 >UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XW72_PSEMY Length = 487 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 157/487 (32%), Positives = 253/487 (51%), Gaps = 46/487 (9%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G+GSG+D+ SI+ L +++A T + + + A++SA GTL AL TF+TA +L+K Sbjct: 6 GIGSGVDIDSIVKVLVDSERAPKTAQLDRLEKTTVARISALGTLTGALNTFKTAIDSLNK 65 Query: 67 ADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD 125 A LF A T+++S+T T A A AG Y++ V LA + + ++ + AT + Sbjct: 66 ASLFEARTASSSNTNVLKVTAATTAPAGNYSVQVQQLASSSKVGLQSV---SGGGAATFN 122 Query: 126 SK-LTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTS 182 S ++I G ++I+ N++L+G+RDAIN A +GVSASII +G RL +TS Sbjct: 123 SGVMSISAG--STSFDVEITEGNNTLAGMRDAINEAGRSSGVSASIITDDSGS-RLVLTS 179 Query: 183 NDTGLDNAMTLSV------SGDDAL--QSFMG----------YDASASSNGMEVSVAAQN 224 TG N + +SV SG +AL Q+F S+++ V AQ+ Sbjct: 180 TKTGAGNDIQVSVTEDGVTSGSNALTSQAFTPAVDPDNANAFLPPSSTTGAAGVISKAQS 239 Query: 225 AQLTVNNVAIENSSNTISDALENITLNL------NDVTTGNQT-LTITQDTSKAQTAIKD 277 A+LT++ + + +N I DALE +TL+L D G LT+ D + ++ ++ Sbjct: 240 AKLTIDGLQLVRDTNKIDDALEGVTLDLVAAQSSADRLEGKTINLTVGVDKAGVKSNLQK 299 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS 337 +V+AYN+LI + S LT VD + G LLGDS++R + + L++ + Sbjct: 300 FVSAYNALITSTSQLTAVVPVDG----SNPVTGPLLGDSSVRNVLSALRNEMVKMTGEGG 355 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV-GALIVGDGKKTGITTTIGSNLTS 396 + LA +GITT+ DGKL L+ LTA L + V G L GD G+ + ++ Sbjct: 356 VRALADLGITTE-KDGKLTLNDSALTATLDNNFDQVAGYLTGGD----GLMERLAKAVSG 410 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 ++ST G++K TD ++ T + + A R++ R Q+ +D L+ L TS Sbjct: 411 YVSTDGVLKQRTDALNGTKKNIDEQRKALDLRVEKIQTRLYAQYNAMDSLVGQLKRTSES 470 Query: 457 LTQQFEN 463 L+ N Sbjct: 471 LSGMLAN 477 >UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 Tax=Burkholderia RepID=A4JAB2_BURVG Length = 530 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 163/503 (32%), Positives = 264/503 (52%), Gaps = 81/503 (16%) Query: 11 SGLDLSSILDSL----TAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 S +D++S++ +L TA Q A LT QQ++ +SAYGTL + L+ Q +LS Sbjct: 43 SSMDVNSLVTALVNAKTAGQAAALTA---QQTTDNTTISAYGTLSAGLSALQAGLKSLSN 99 Query: 67 ADLFSATSTTSSTTAFSATTAGNAI---------AGKYTISVTHLAQAQTLTTRTTRDDT 117 + AF+AT +GN I AG Y+I V+ +A AQ LT++ Sbjct: 100 GTTLN---------AFTATASGNGITAAAASGAVAGSYSIDVSQVATAQVLTSK--GYSA 148 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGE 175 TA+A+ S L++ GG I++D +NS+++GI AIN+A GV+A+++N +G Sbjct: 149 TTALASGPSALSLSVGGASTTISLD--GSNSTIAGIASAINSASNNPGVTATVVNGTDGA 206 Query: 176 YRLSVTSNDTGLDNAMTLSV----SGDDALQSFMGYDASASSNGMEVS------------ 219 + L + + TG NA++++V +GDD + + A + NG+ + Sbjct: 207 H-LVLHATATGSSNAISIAVTDSNAGDDLNKLAVQGSAGVALNGVSKATSSQLTANQSSL 265 Query: 220 ----------VAAQNAQLTVNNVAIENSSNTISDALENITLNLN----DVTTGN-----Q 260 AAQ+A T++ A+ +++NT++ AL +TLNL+ D G Q Sbjct: 266 PQGTVNWTQTTAAQDAYFTIDGTAVTSATNTVTSALSGVTLNLSAASVDSAAGTTNASPQ 325 Query: 261 TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT 320 TLTI QDT+ AI ++V+ YN+L+ T +LT ++ S S + G LLGDSTL Sbjct: 326 TLTIAQDTTSQAAAINNFVSLYNTLVTTMGTLTSFS-------SSSKTQGPLLGDSTLNM 378 Query: 321 IQTQLKSMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 IQ L S+++N V S + +L IGI+ +DG L +D+ L +AL+ + + V L Sbjct: 379 IQNALASVVANGVKSGGTTSSLGAIGISLQ-ADGTLSVDSTTLNSALESNQATVAKLF-- 435 Query: 380 DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR-YKE 438 GI + S++ +L T G I+ T+ +++ L ++ AA AQ+ Y+ Sbjct: 436 -NSTNGIAAQLNSDIAGYLGTNGPIQTRTNTLNRDLTSISTQ-QAALSTYQAQLTNMYQA 493 Query: 439 QFTQLDVLMTSLNSTSSYLTQQF 461 QFT L+ LM+++N+ S YLTQ F Sbjct: 494 QFTALNTLMSTMNNNSQYLTQLF 516 >UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4S8_THIIN Length = 653 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 132/382 (34%), Positives = 230/382 (60%), Gaps = 16/382 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+S+S G+ SG+++ S++ SL+AA + +T + NQ+ S+ + LSA+G+++S+L++ Q+ Sbjct: 1 MSSVSISGLVSGINVQSLITSLSAAYQQPITLLQNQEQSYQSTLSAWGSVQSSLSSLQST 60 Query: 61 NTALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L L + T S+++A S T + NA G Y++S LAQ Q++ + T T Sbjct: 61 VAGLQNITSLNNRTVNLSNSSAVSGTASANAPLGTYSLSNIVLAQTQSIYSGDFASATNT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 A+ T ++ + G I+I + N+SL+GI AIN + +GV+A++I G G YRL+ Sbjct: 121 AVGTGTLQIQV---GSGSVTNINIDSTNNSLNGIAAAINQSGSGVNAAVIYDGTG-YRLT 176 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +T N+TG NA T+S SG + Y A AS GM S A+NA +++N + + +++N Sbjct: 177 LTGNNTGAANAFTVSTSGATGSLGSLSYSAGASG-GMTESQTARNASVSINGLTVTSATN 235 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 +S A+ ++LNL + +G+ TLT+ DTS +++ +V+A+N+ + T + LT YT Sbjct: 236 AVSGAIPGVSLNLLEA-SGSTTLTVANDTSAFVQSVQSFVSAFNTTMGTLNQLTAYTP-G 293 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLS----NTVSSSSYKTLAQIGITTDPSDGKL 355 +GA Q G L+G++ ++T++TQL +++S T S+Y +L +GI+ DG L Sbjct: 294 SGASGQG---GPLIGNAGIQTLRTQLLNLISGQGIGTTPGSAYTSLGAVGISL-AQDGTL 349 Query: 356 ELDADKLTAALKKDASGVGALI 377 LD+ KL++AL+ + + V L Sbjct: 350 ALDSGKLSSALQSNYNAVAGLF 371 >UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 Tax=Shewanella RepID=Q0HKR3_SHESM Length = 455 Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 151/468 (32%), Positives = 250/468 (53%), Gaps = 34/468 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++S+G+GSG+D+ I+ +L A+ A + + A++S G LKSA++ F Sbjct: 3 LTSVGIGSGMDIGGIVTALVNAESAGKIAKFDVNEGKLNAQISGIGALKSAMSEFNDKLK 62 Query: 63 ALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+KA+ F S TSS SAT A++G Y I V LAQ+Q + T D T Sbjct: 63 TLAKAETFGSQKVVTSSKDYLSATVDKTAVSGTYQIKVEQLAQSQKVGTAVATDTTS--- 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLS 179 + L+I+ G ID+SA +S L+ I + IN + V+A+I+N G +L Sbjct: 120 PIGEGALSIKVGSGT-AFNIDVSATDS-LTDIMNKINKSDDNTDVTATIVN-GELGPQLV 176 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 + S TG DN ++++ A S G S + EV+ A+NA + V+ V + + SN Sbjct: 177 LGSKKTGEDNQISVT-----ATDSGAGTGLSDTFTMSEVT-PAKNAIVYVDGVKVVSDSN 230 Query: 240 TISDALENITLNLN----DVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 T+ A+ ++L L D TT T+T+++DT+K +TAI+ +V +YNSL+ T +LTKY Sbjct: 231 TLDKAITGVSLTLTAADVDKTT---TMTVSKDTAKTKTAIEGFVESYNSLMTTIQNLTKY 287 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-TLAQIGITTDPSDGK 354 D+ + G L GD+ R+IQ+QL++M+S+ +S K LA +GI T +G Sbjct: 288 -------DADTKQAGILQGDALPRSIQSQLRTMVSSEFDTSDGKQVLANLGIKT-TREGL 339 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 LE+D+ KLT +LK D + L + TG++ + + +++ + GII + + + Sbjct: 340 LEIDSTKLTESLKNDKGTISELFTSE--NTGLSAKMSGLVDTYIKSGGIIDGRDNSLDEQ 397 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 L ++ S R+ A R +QF +D+++ +LNS SS L + + Sbjct: 398 LARIADSREQLSTRMAAYSDRLYKQFNAMDLVVANLNSQSSMLLSRLD 445 >UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKN6_PSEU5 Length = 451 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 141/443 (31%), Positives = 233/443 (52%), Gaps = 40/443 (9%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G+GSG+D+ SI+ S+ AA++A ++N + T +++A G LKSA++ FQTA AL+K Sbjct: 6 GIGSGIDIDSIVKSMVAAERAPKEAQLANLEKKTTTQITAIGALKSAISEFQTALRALNK 65 Query: 67 ADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD 125 +LF A S TSS T +A A AG Y + V LA + + + D+ + Sbjct: 66 PELFQARSATSSKTDLVGVSASPKAGAGSYQVEVRSLATSSKVALKAFPDNAGAPATFAG 125 Query: 126 SKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYRLSVTSN 183 +T++ G PITID S +++L+GIRDAIN + G++A+I+ G RL ++S Sbjct: 126 GTMTVKVGEKSLPITIDQS--SNTLAGIRDAINAGGKEMGLTATIVTDDAG-ARLVLSSA 182 Query: 184 DTGLDNAMTLSV-SGDDALQSF----MGYDAS-------------------ASSNGMEVS 219 TG +T+ S D AL ++ +G+D S A +G Sbjct: 183 TTGAGEDITVEAKSTDAALGAYSLEDLGFDGSTVEPKPNEDDPEAYAAAMTAYRSGPMTL 242 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKD 277 AQ+AQ++V+ + I + SN I A+E +TL+L T N+ LTI+ +D + + I+ Sbjct: 243 TQAQSAQVSVDGLLITSKSNKIEGAIEGVTLDLKGKTAANEPLTISVAEDKAGVKKQIQS 302 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS 337 +V++YN LI ++ TK T V +G + GAL+GD++ R + ++S L N + Sbjct: 303 FVDSYNKLIGVINAQTKVTPVGSGG---APLAGALVGDASARLVLGTIRSELVNVQGEGA 359 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 + L +GITT DG L+ D KL AL + + + L G+ G+ + S L + Sbjct: 360 IRALFDLGITTQ-KDGTLKTDDTKLDDALSNNFADLPGLFTGN---NGLAARLDSKLKPY 415 Query: 398 LSTTGIIKAATDGVSKTLNKLTK 420 T GI++ +++T++ + K Sbjct: 416 TETGGILEQRNKVMTETISGIGK 438 >UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJT0_METPP Length = 477 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 158/482 (32%), Positives = 253/482 (52%), Gaps = 31/482 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD+SSI+ L A ++ L + + ++SAYG L+S ++ A Sbjct: 2 AISSPGLGSGLDVSSIVSQLVALERKPLEKMQTAATFMQTQVSAYGQLQSLVSAVGDAAK 61 Query: 63 ALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K L+ A S TS T+ +AT + A G Y++SV+ +A+AQ+L + T Sbjct: 62 ALAKPTLWQAASAGTSDATSVAATASAGAAIGSYSVSVSQIARAQSLASAVFTAPTDVVG 121 Query: 122 ATSDSKLTIQQGG---DKDP--------ITIDIS-AANSSLSGIRDAINNAKAGVSASII 169 A K+TI+ GG DP T+++ A ++L ++ IN A AGVSA+I+ Sbjct: 122 A---GKMTIELGGYNVANDPAFTPKTGSTTLELEFAEGTTLEQVKTQINAANAGVSAAIV 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 NG RL++TS TGLD+ + ++VS + + YD ++ +N M + AA NA ++ Sbjct: 179 RDANGA-RLTLTSTTTGLDSTLRVAVSDATGALTGLAYDPASGANPMTQTQAAVNALASI 237 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N +AIE+ +N ++ L+ +TL+L VTT T+ +T +T + AIK + +AYN+L Sbjct: 238 NGLAIESPTNRLTGTLDGVTLDLVKVTTAPVTVNVTTNTGTMRDAIKKFSDAYNALNTYL 297 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS-NTVSSSSYKTLAQIGITT 348 + TKY D ++ G L GDS ++ Q ++ML ++ +S+ L+ IG Sbjct: 298 VTQTKY-------DEENKIGGTLQGDSAAVGLRNQFRAMLRQDSAASAELTRLSDIGFNV 350 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL----STTGII 404 DG + LD KL AAL K A + L + +T +G T G+I Sbjct: 351 Q-RDGSIVLDNAKLDAALAKPAE-LSKLFTTNDTANPASTGLGVRFQKLADMSTGTEGVI 408 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + G+ L + D + +DR D R +Q+T LD M L++ S+Y+TQQ + Sbjct: 409 ASRNAGLKARLERNQDDQDKVNDRADRMQVRLTQQYTALDTQMAKLSALSTYMTQQLDGL 468 Query: 465 SN 466 SN Sbjct: 469 SN 470 >UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADF2_CARHZ Length = 476 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 150/487 (30%), Positives = 250/487 (51%), Gaps = 59/487 (12%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGLD + I++ L ++ L + ++++ A A+ +K+ L+T + +L A Sbjct: 7 GLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQSLQSA 66 Query: 68 DLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLA--------QAQTLTTRTTRDDTK 118 L+ S T+T+S TT +A+ A+ G YTI V +A Q ++T + T Sbjct: 67 SLYTSLTATSSDTTILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATLNLNPTS 126 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 IA +Q+ + I I I + +S L IRD INNAKAGV+ASI+ + RL Sbjct: 127 FKIAIGG---VVQKDSQGNDIVISIDSTDS-LVSIRDKINNAKAGVTASIV-----DNRL 177 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +T+N TG N+++ + DALQ+ +G A A+ N + V + +A+L +N + + SS Sbjct: 178 LLTANVTGSANSISFTAVSGDALQA-LGI-ADANGNAVNVVQSGVDAKLIINGLTVIRSS 235 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 NTISDA+ +TLN+ + G ++T+ DT+ IK +VN YN L++ ++ T Y Sbjct: 236 NTISDAIYGVTLNVKKI--GTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAY--- 290 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS----SSSY-------KTLAQIGIT 347 D + + G L GD+T + I QL+ ++ + VS +++Y +L IGI+ Sbjct: 291 ----DPNTKTKGVLQGDATAQQIMFQLRQIVGSAVSGLTDTATYNGKTVTLNSLMAIGIS 346 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 T + L LD +KLT +K++A VG I + GI NL ++ + + A Sbjct: 347 TSGKEATLSLDENKLTELIKQNAQAVGK-IFTNTANNGII----DNLKPYVESLAVY-AT 400 Query: 408 TDGVSKTLNKLTKDYNAAS---------DRIDAQVARYKEQ----FTQLDVLMTSLNSTS 454 +GV +TKD + A DR + + R +E+ FTQL+ +M+ L + S Sbjct: 401 ANGVHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQS 460 Query: 455 SYLTQQF 461 ++L Q Sbjct: 461 NWLAAQV 467 >UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z883_9NEIS Length = 463 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 139/470 (29%), Positives = 250/470 (53%), Gaps = 40/470 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI++ VG+ LD+ SI+ L ++ +T ++ S F +LSA G + S L++ QTA Sbjct: 1 MASITT-SVGA-LDVQSIVSQLMTIEQQPMTASQSRVSKFNTQLSAVGKISSGLSSLQTA 58 Query: 61 NTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD---- 115 +L+ S +++S +T S T+ +AG Y +++T LAQ + L D Sbjct: 59 IRSLASGSFLQSYKASSSDSTIASVATSAATVAGSYALNITSLAQPRQLVFDKYADGTAI 118 Query: 116 -DTKTAIATSDSKLTIQQGGDK-DPITIDISAANS-SLSGIRDAINNAKAGVSASIINVG 172 D IA++ LT GG PI++ + +S +L+ +RD IN A GV+A+I+N Sbjct: 119 TDPTAVIASAPDSLTFTVGGKATTPISLRDNPGDSVTLNSMRDRINQAGVGVTANIVN-N 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSG----DDALQSFMG--YDASASSNGMEVSVAAQNAQ 226 NG Y+L +TS ++G DNA +S G D + + +G ++ +++ + S AAQNA Sbjct: 178 NGNYKLVITSTNSGSDNAFLISAGGAEPADASSPASLGGLTQSTGTASAISESHAAQNAA 237 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LT+N V++ +SN ++DA+ +TL+L+ TG ++ + QD+ TA++ +V+AYN + Sbjct: 238 LTINGVSVSTASNHLTDAIAGLTLDLSK--TGEASINVVQDSDGITTALQAFVDAYNQV- 294 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS----SYKTLA 342 ++A ++S+ ++ G++++ I++Q+ S+L+ VS + SY LA Sbjct: 295 --------HSA------AESARTDSMKGNASVLAIESQMTSILATPVSGANPYNSYAYLA 340 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 Q+GI+ DG L+LD AL D + V L G+ G + + L G Sbjct: 341 QVGISIQ-KDGTLKLDKTAFNTALSADPAAVKNLF-GNSNNDGFADRFNAVINQLLGPDG 398 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 II+++ ++ ++ T ++D +Y +Q+T L+ ++ + S Sbjct: 399 IIESSKSSINSRIDFETNYQTGLQSKLDRLKTQYTQQYTNLNAILAKMQS 448 >UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAZ6_AMMDK Length = 462 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 142/479 (29%), Positives = 238/479 (49%), Gaps = 41/479 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA + +G+ SGLD SI+D L ++ + + +++ + +A+ + L Sbjct: 1 MADMRIVGIFSGLDTQSIIDKLMQLERKPIELLQQKEARLEQQKAAWQKIGQDLNALNAV 60 Query: 61 NTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ A ++A + TSS T+ +A + A G Y I+++ LAQAQ++ + D T Sbjct: 61 LFDLTLASTYAAKAATSSNTSVLTAQASNTAQPGTYNITISQLAQAQSVASGAFSDPT-- 118 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 A + T Q G IT+ SL+ IRD IN A AGV+A+++ G YRL Sbjct: 119 --AALNLSGTFQINGKS--ITV---VTTDSLNSIRDKINAAGAGVTATVVLQQTGSYRLI 171 Query: 180 VTSNDTGLDNAMTLSVSGDDA----LQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +TS TG A++ DDA LQS +G S + +++ AQ+A TVN + + Sbjct: 172 ITSQTTGSAGAISFV---DDATTKVLQS-LGILTSTGAIANQLT-PAQDAVFTVNGLQLT 226 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSNT++DA+ +TL L + G+ TLT++ D + IK++V+ YN+L+ + TKY Sbjct: 227 RSSNTVTDAISGVTLKLQSL--GSATLTVSTDVQAIKDKIKNFVDKYNALMQDIAEYTKY 284 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDG 353 D + + G L+GD++L +Q+ L+ LS+ VS S Y +L+ IGITT Sbjct: 285 -------DPNTKTAGILMGDASLYQLQSSLRRWLSDFVSGLSYPYNSLSGIGITTSGEAP 337 Query: 354 KLELDADKLTAALKKDASGVGALIVGD------GKKTGITTTIGSNLTSWL-----STTG 402 L +D KL+ AL + V L D + G+ + L WL + G Sbjct: 338 TLSIDDTKLSQALSQAPDQVAKLFNADSGSAYPSQADGVAVRLRKILKLWLTGTGTTGVG 397 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++A + S+ + + + +R+ + +QF ++ + LN+ SS+L Q+F Sbjct: 398 FLQAKDNYFSQEIRSIEDQIRSMEERLKVREQVLWQQFNAMEEFLAQLNAQSSWLAQKF 456 >UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG73_9GAMM Length = 479 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 147/484 (30%), Positives = 249/484 (51%), Gaps = 42/484 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISN-QQSSFTAKLSAYGTLKSALTTFQTANT 62 I+++G GSG+DL +++ L AA++ N +++ AK S+ G LKS ++ F+ + Sbjct: 3 ITAIGTGSGIDLETLVTDLIAAEREPREISLNLKETVANAKFSSLGNLKSNVSEFRDSLA 62 Query: 63 ALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 +L +SA T+T+ +T+ F+ T NA G YTI V LA A + T + + + Sbjct: 63 SLKDITSYSARTATSGNTSLFTVTAEANANVGSYTIEVNTLANANKVATNASFTSPNSTV 122 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSS-LSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + G T D++ A++ L+ +RDAINNA GV+AS+I +G L Sbjct: 123 GQGTLTIGFLAGS-----TFDVTVADTDDLTAVRDAINNATDNVGVTASLITAASGT-EL 176 Query: 179 SVTSNDTGLDNAMTLSV--SGDDALQ-----SFMGYDASASSNG------MEVSVAAQNA 225 +T+N TG N + +SV +GD Q S + YD S +N M+ AAQ+A Sbjct: 177 VITANKTGAANQLNISVIDTGDTTNQDANGLSRLFYDGSDPANSINGVNQMQQIDAAQDA 236 Query: 226 QLTVNNVAIENSSNTISDALENITLN-LND----VTTGNQTLTITQDTSKAQTAIKDWVN 280 Q+ V+ A +S+N S LE +T+ L D T + + ++ D + ++ ++++V Sbjct: 237 QIYVDGFAATSSTNEFSTVLEGVTITALADDGGAATLPSANMVVSADKTLIKSGLENFVA 296 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSY 338 YNSL+ + LT Y S+++G L G++ + ++TQ++ +L TV S S+ Sbjct: 297 GYNSLVTVLNELTDYNVA-------SNTSGLLSGETVIAGMETQIRRLLGATVESADSTL 349 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 LA +GI+T+ DG + LD L ++ + S +G L+ GD GI T + L +L Sbjct: 350 NNLALLGISTN-RDGSIALDETALNNTIENNFSNIGTLMSGD---DGIITRMDDLLGGFL 405 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 G+ ++ L+ + R+ RY+ F +LD+L++ LNST ++LT Sbjct: 406 DRGGLFATKEATLTTQLDDVADQRLNLELRLSVIEERYRSAFGKLDILVSRLNSTGNFLT 465 Query: 459 QQFE 462 QQ E Sbjct: 466 QQLE 469 >UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WCE3_ACISJ Length = 479 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 160/489 (32%), Positives = 242/489 (49%), Gaps = 53/489 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQS---SFTAKLSAYGTLKSALTTFQTA 60 +SS G+GSGL + I+ L A ++ PI+ QS S KLS + +KS ++T A Sbjct: 3 LSSTGIGSGLQVEDIVSKLVALER---QPIAKLQSVALSMQTKLSIFSQVKSMMSTLSDA 59 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LSK + +T+S++ A S + G A A + I V LA+AQ+ + + Sbjct: 60 AAKLSKNSTWGGMVATSSNSAAVSVSVIGAASATSFGIGVQQLARAQSAASASL---GAP 116 Query: 120 AIATSDSKLTIQQG----------------GDKDPITIDISAANSSLSGIRDAINNAKAG 163 + L+IQ G P+ ID A SL+ I IN AKAG Sbjct: 117 GASVGGGSLSIQLGTWTGTDTASPQFTEGAAGAVPVQID---AGDSLATIASKINGAKAG 173 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF--MGYDA-SASSNGMEVSV 220 V+A+++ NGE RL V S+ TG + + V+ D A + +D A GM + Sbjct: 174 VTATVLRDANGE-RLLVRSDSTGASSGFRIRVTEDGAAPGLSNLAFDPQGAPGAGMAANA 232 Query: 221 A--AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 AQNAQ TVN +A+E+++NT +D + ++ + +TT + + DT + I+D+ Sbjct: 233 IQYAQNAQATVNGIAVESATNTFTDTIPGLSFTASQITTAPVEVAVGSDTETLKKNIQDF 292 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSS 337 VNAYN L D + TKY DS S + GAL GD T +Q L+SM+++T + + Sbjct: 293 VNAYNGLNDLLGASTKY-------DSASKTAGALQGDGTTVALQNTLRSMIASTAEGTGA 345 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI---VGDGKKT-GITTTIGSN 393 ++ LA IGI + GKLE+ ADKL AAL K+ + AL VG G + G+ + + Sbjct: 346 FQRLADIGIDIK-TGGKLEVSADKLDAAL-KNPEALKALFATNVGSGSQANGLAVKMKAL 403 Query: 394 LTSWLSTTGII--KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 L G++ KA+ G S NK D + +R R + Q+T LD M SL+ Sbjct: 404 ADQMLLPEGLLDNKASALGASIKRNK--SDQDRVDERASIMEKRLRAQYTALDAKMASLS 461 Query: 452 STSSYLTQQ 460 +Y+ QQ Sbjct: 462 GLGAYVGQQ 470 >UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSH1_9PROT Length = 469 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 152/482 (31%), Positives = 249/482 (51%), Gaps = 54/482 (11%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA---------NT 62 G+D++SI+ L ++A LT ++ +++ F AK+SA G+L+ A++ QTA T Sbjct: 7 GIDVNSIVTQLMTVEQAPLTALAKKEAGFQAKISALGSLQGAVSALQTAAGNLVPAIGTT 66 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT----TRDDTK 118 AL K +F A T SA+TA +A+AG Y++ VT LA+ ++ T T T Sbjct: 67 ALQKFSVFKAA--LGDATIASASTAASAVAGTYSLEVTRLAKQHSIMTATGAATPFSGTG 124 Query: 119 TAIATSDSKLTIQ----QGGDKDPITIDISAAN-SSLSGIRDAINNAKAGVSASIINVGN 173 + + T KLTI G + D++ A+ ++ IRD+IN+A GVSA +IN G Sbjct: 125 STLPTG-GKLTISLDSVPPGASPFKSTDVTIADGATPEAIRDSINSASTGVSAVVIN-GT 182 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS----NGMEVSVAAQNAQLTV 229 +L +TS+ G + + LS + S + YD +A + S AAQ + + Sbjct: 183 AGKQLVLTSDTAGSNQFIKLS-----GIAS-LAYDPNAVPVPLTDPFVQSQAAQGSAFKL 236 Query: 230 NNVAIENSSNTISDALENITLNL-----NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 N +AIE ++NT++ AL+ +TL L VT+ + TLTI++DTS + V A N Sbjct: 237 NGIAIEATTNTVTTALDGVTLTLLKGPEAPVTSLSTTLTISKDTSSLTAGVNALVKALND 296 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT---VSSSSYKTL 341 T + L Y D+ + G L GD+TLR+ Q +++ ++ + + L Sbjct: 297 FNSTANGLGSY-------DAATRKAGTLNGDNTLRSAQNAIRTAFGKVPTDLAGAKLQRL 349 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 + IG++ DGK+ +D KL A+ +D GV L+ G T + + + T Sbjct: 350 SDIGVSLQ-KDGKVTVDTAKLGKAISEDLPGVAKLVAAYGSATKLAAD------TLVGTG 402 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G+I A ++G+S ++ L K +A S R+ ARY+ QF+ LD L+ + +TS++L QQ Sbjct: 403 GLIAARSEGLSASIQNLGKQSDAISSRLTQIEARYRRQFSSLDTLIAGMTTTSTFLEQQL 462 Query: 462 EN 463 N Sbjct: 463 AN 464 >UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUC9_HALHL Length = 476 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 128/475 (26%), Positives = 229/475 (48%), Gaps = 36/475 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 S + VGSG+D + ++ L A++A T + ++ KL A G ++ + Q A Sbjct: 13 SQMDVGSGIDTNKMVQDLVRAERAPTEQRLDRREQELQEKLEALGQMRGTIGELQEAVQG 72 Query: 64 LSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRT-TRDDTKTAI 121 L +S SS +A +A A G+Y + V LA+ Q L T + +D+ A+ Sbjct: 73 LGDPSAYSGIDAESSNAGVAAVSASEEARPGQYDVEVEQLARTQRLATASGAFEDSADAV 132 Query: 122 ATSDSKLTIQQG-GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 T +L I G G++ +TID + +L GIRDAIN G+ AS+++ G G RL++ Sbjct: 133 GTG--RLVITDGEGNEQAVTID--EESGTLLGIRDAINAQAEGLRASVVDDGAG-PRLAI 187 Query: 181 TSNDTGLDNAMTLSVSGDD---------ALQSFMGYDASASSNG--MEVSVAAQNAQLTV 229 + TG NA+ + D ALQ + S G EV A+ +A +T+ Sbjct: 188 ATEQTGRANAIAQIRAEQDPEDDQGNLSALQYNVADPQSGEPMGAFQEVRPAS-DAVVTI 246 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + + I N I A+E TL+L + G ++I Q T A+ I+ V+++N + Sbjct: 247 DGMQITRPENRIEGAIEGATLSLKE--EGRSRVSIEQQTGLAEENIQRLVDSFNQVRAQL 304 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGI 346 + L+ Y D ++ G L GD TLR + +QL ++ V + + +L +G+ Sbjct: 305 NQLSDY-------DPEAEKAGPLQGDHTLRNLLSQLSRAVNEPVEALDGAPISSLGDLGV 357 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 T+ DG L+LD +++ + + + V ++ ++G+ + + L + L +I Sbjct: 358 RTN-RDGTLDLDGERMQQMVGEHSELVTRMMT--DPESGVMSRLEGVLENALGRDSVIDM 414 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 TDGV L+++ D R++ + + + +F+++D + LN TS +L Q+ Sbjct: 415 RTDGVESRLDRIADDRERLDRRMERREDQLRSEFSRMDSRVAELNQTSEFLEQRL 469 >UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament cap protein) n=2 Tax=unclassified Gammaproteobacteria RepID=A4A604_9GAMM Length = 680 Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 124/400 (31%), Positives = 223/400 (55%), Gaps = 56/400 (14%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISN----QQSSFTAKLSAYGTLKSALTTFQT 59 +++ G+GSGLD+ ++ SL A++A P N Q++ T++LSA+GTL+ AL+ Q+ Sbjct: 2 VAATGIGSGLDIEGLVTSLVNAERA---PAENRLLTQEAELTSELSAFGTLQGALSGLQS 58 Query: 60 ANTALSKADLF---SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD 116 + L+ + F SATS+ ++ + SA+T NA Y I V LAQAQ+L + + Sbjct: 59 SVAGLTNQNTFNQRSATSSNAAAVSVSAST--NAAPSSYQIQVDQLAQAQSLASGSFTSL 116 Query: 117 TKTAIATSDSKLTIQQG---------------------GDKDPITIDISAANSSLSGIRD 155 T T + LT + G D+ ++ I ++N++L G+ D Sbjct: 117 TDT---VGEGTLTFRFGTTDYTPAADLNPANYNGFTVNADRASASVTIDSSNNTLQGLSD 173 Query: 156 AINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS-------GDDALQSFMGYD 208 AIN A GV+A+I+N G G +RL ++S TG N++ + V D+ S + ++ Sbjct: 174 AINEADIGVAAAIVNDGTG-FRLLLSSEQTGASNSIEVQVDDTGDGLDNDNEGLSRLAFN 232 Query: 209 ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDT 268 ASA + +E +VA Q+A ++N +++ + +N++++ ++ ++L L D T TL+++++T Sbjct: 233 ASA--DNLEQTVAGQSAAFSINGLSLSSETNSVANVIDGVSLTLRDTTDTPATLSVSENT 290 Query: 269 SKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSM 328 S ++AI +V AYNS + T ++LT + A ++ + L GD T R++ Q++S Sbjct: 291 SAVRSAIDGFVTAYNSFVSTANNLTAFNA-------ETGAAAPLQGDFTARSVINQVRSA 343 Query: 329 LSNTVS--SSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 LS++ + TLA++G+TT ++G L ++ L AAL Sbjct: 344 LSSSADGFEGPFSTLAELGVTTQ-ANGTLSVNDSTLDAAL 382 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%) Query: 362 LTAALKKDASGVGALIVGD--GKKTGITTT--IGSNLTSWLS----TTGIIKAATDGVSK 413 L+AA A GV + G G + IT + IG L L T G++ TDG+ Sbjct: 561 LSAAAGSSAEGVRLTVSGGALGARGDITVSNGIGIALNGVLEGLTQTNGVLDLRTDGLQS 620 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++++ D +A R++A +RY+ QF LD L+ +++ST S++TQQ N Sbjct: 621 GVDRIADDRDALDRRLEALESRYRRQFNALDTLLANISSTGSFITQQLAN 670 >UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWM3_9GAMM Length = 644 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 131/379 (34%), Positives = 220/379 (58%), Gaps = 34/379 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+S G+ SG+D+ S++ +L+AA + +T + Q+ S+ LSA+GTL+S+L++ Q+A Sbjct: 2 SVSLSGLVSGIDVQSLISNLSAAYQQPITLLQKQEQSYQTSLSAWGTLQSSLSSLQSALG 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIA--------GKYTISVTHLAQAQTLTTRTTR 114 AL +S+ + S + AG A A G Y++S LAQ+Q++ + + Sbjct: 62 ALQNLG-------SSNNRSVSLSNAGVATASVTNGAQLGSYSLSNIVLAQSQSIYSSSFA 114 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 + TA+ T ++ + G + I I+ N +L+GI AIN A GV+A++IN G+G Sbjct: 115 SASNTAVGTGTLQIQVGSGAVSN---IVINGGNDTLNGIASAINQANLGVNAAVINDGSG 171 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 YRL++T TG++NA T++VSG + + Y A S GM +S AAQNA L++N +A+ Sbjct: 172 -YRLTLTGTGTGVNNAFTVAVSGASGSLAELSYSPGA-SGGMTLSQAAQNASLSINGLAV 229 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +SSNT+S A+ +TLNL T+G+ TL ++ S +A++ + +A+N + T + LT Sbjct: 230 TSSSNTVSGAIPGVTLNLQ--TSGSTTLQVSASNSAFVSAVQSFTSAFNKTMGTINQLTA 287 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT---VSS-SSYKTLAQIGITTDP 350 Y A Q+ S G LLG + ++ ++TQL +++S VS+ S+Y +L +G+ Sbjct: 288 YNA-------QTGSGGPLLGSAAVQGLRTQLLNLISGPGLGVSAGSAYNSLGAVGLGLT- 339 Query: 351 SDGKLELDADKLTAALKKD 369 S G + L+ L+ AL D Sbjct: 340 SSGTITLNTGTLSTALNSD 358 >UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWZ3_SODGM Length = 486 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 141/475 (29%), Positives = 232/475 (48%), Gaps = 39/475 (8%) Query: 12 GLDLSSILDSLTAAQKAT----LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ ++ I DSL Q L P +Q + +K+SA+G ++S+L T + AL K Sbjct: 3 GISVTGISDSLMEMQAKKNTLLLQPYQLRQKNIESKISAWGKIRSSLQTLLEKSNAL-KN 61 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD-DTKTAIATSDS 126 D F A S AFSA+ + A+AG + I V+ LA TL+ + DT + + Sbjct: 62 DAFYAMKM-SENKAFSASASSGAMAGTHNIRVSQLAHNHTLSLTMEKGIDTPLGNSAATR 120 Query: 127 KLTIQQGGDKDPI---TIDISAANSSLSGIRDAINNAKAGVSASIINVGN-GEYRLSVTS 182 L I Q G+ I I ++ +SL+GI +IN AG+ A + +V N G RL + + Sbjct: 121 NLKISQKGENGQIKETVISLAQEETSLAGIAKSINGKNAGIRAEVKSVDNEGTQRLILRA 180 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGY-----------DASASSNGMEVSVAAQNAQLTVNN 231 D+G M LSV GD L + M Y D+ S ++ + A +A + V+ Sbjct: 181 QDSGSAGEMALSVEGDTTLAAIMNYTTPPEEPGDSTDSGEVSEKIKQDLPATDAIIWVDG 240 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 SSNTI+D L +TL L + +++ LT++ D S Q A++++V A+N I Sbjct: 241 NKYTRSSNTINDILTGVTLTLKQTSKDDESEALTLSPDESAVQEAVEEFVTAFNDYITQS 300 Query: 290 SSLTKYTAVD---------AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT 340 SSL+K+T + A D+ +NG L G+S L +Q L+ + + + Sbjct: 301 SSLSKFTTANYSNLKTDTVALPDA---TNGPLAGESLLTDLQALLRRDAGSNYGNDDVTS 357 Query: 341 LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST 400 +A +GI D GKLELD+ KL + + V L +G +K G+ + ++ ++ Sbjct: 358 IADLGIKVDAKTGKLELDSTKLKNKIHTNPEEVQRLFLGTEEKPGLAGVMSDHIKGYVGR 417 Query: 401 TG---IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 G IIK T+ + K + K I+A++ +++Q+ Q++V +T L S Sbjct: 418 DGKGNIIKDETEKLEKDKKEAKKQLERTEATIEARMRAFQKQYQQMEVAITKLQS 472 >UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y1_9GAMM Length = 1315 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 131/403 (32%), Positives = 220/403 (54%), Gaps = 41/403 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASI SLG+GS L S +++++ A KA + +Q A++SAYG ++S L F Sbjct: 1 MASIESLGIGSDLLTSDLVENIINADKAAGELRLDTKQQIIDAEISAYGEIQSKLFDFSE 60 Query: 60 ANTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ AD AT+ TSS + +AT + +A G Y++ V +A+A +L +++ T Sbjct: 61 SIVALADADNVGATTATSSDDSILTATASSSAPEGNYSVEVQRIAKAHSLVSQSFSSTTA 120 Query: 119 T-AIATSDSKLTIQQGG------DKDPIT------IDISAANSSLSGIRDAINNAKAGVS 165 T T + K D D T I+I A N++LSG+RDAINNA GV Sbjct: 121 TVGTGTLEFKFGTTSYTGGGGYDDFDLNTEAASKEIEIDAGNNTLSGLRDAINNADFGVK 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA--------LQSFMGYDASASSNG-- 215 ASII G+G Y L ++S +TG + M++ + DA L +F Y+ + + G Sbjct: 181 ASIIFDGSG-YVLQMSSEETGEN--MSMEIVAKDASGALATTGLSAFA-YNKNQDTPGTN 236 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTA 274 M + Q+A + +N + + SSNT+ + ++ +TLNL G Q T++++ D Sbjct: 237 MTQTQQGQDALINLNGLTVTRSSNTVDELIDGVTLNLKGEDVGKQVTVSVSPDIEGISEK 296 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV- 333 I+ V+ YN+ + + LT + AD Q S LLGDSTLR+I TQ++S++++TV Sbjct: 297 IQKMVDTYNAYKEVYDDLTSFN-----ADRQQGS--LLLGDSTLRSIDTQIRSLMTSTVE 349 Query: 334 --SSSSYKTLAQIGITTDPSDG-KLELDADKLTAALKKDASGV 373 + +++++ +++GI TD +D K++ DA +++++ V Sbjct: 350 GITGTNFRSFSELGIYTDQNDSYKMKFDASLFLKGIRENSEAV 392 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 353 GKLELDADKLTAALKKDASGVGALIVGD--GKK------TGITTTIGSNLTSWLSTTG-I 403 G+ + +A K DASG+ + G G++ TGI + L +L G + Sbjct: 1189 GRGDGEAGKAKVGDVDDASGLRIKVTGGALGERGSVSYVTGIADRLKDILQGFLDPEGGL 1248 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + D + K +L +D + RI AQ AR K QF D ++ +L +T +YL QQFE Sbjct: 1249 LDTKFDTLDKQQEQLDEDRESFEARISAQEARLKSQFLYNDSIIATLKTTENYLKQQFE 1307 >UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 Tax=Burkholderia RepID=Q0BJF7_BURCM Length = 475 Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 159/484 (32%), Positives = 234/484 (48%), Gaps = 89/484 (18%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSF-TAKLSAYGTLKSALTTFQTANTALSKADLFS 71 LD+SS++ +L A+ A T + + +LSA G LKSAL+ QTA L+ S Sbjct: 33 LDVSSLVSALVTAKTAGQTQTLTTKQTHDNTELSAVGKLKSALSALQTAIAGLANGSTLS 92 Query: 72 ATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTR-TTRDDTKTAIATSDSKL 128 + T+S T +A+ G A+AG Y ++VT LA A L++ T DT IA + Sbjct: 93 GLAATASGTGITASVKNGGGAVAGSYAVNVTQLATANKLSSAGITASDT---IAAGSLSI 149 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSVTSNDTG 186 T+ G +++ AA +SLS I +IN GV+AS+I +G++ L + SN+TG Sbjct: 150 TL---GSNAAFNVNV-AAGASLSDIATSINTTAGNPGVTASVITGSDGQH-LVIQSNNTG 204 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALE 246 N T+SVSG G +A +S G A +AQLTV+ + ++SN++S L Sbjct: 205 AAN--TVSVSG-------TGVNAKLTS-GYSTVTKAADAQLTVDGTPVSSASNSVSGVLT 254 Query: 247 NITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQ 305 +TLNL QT+T++QDT+ +AI +VNAYN + T SL+ Y D Sbjct: 255 GVTLNLTPAALNTTQTVTLSQDTTATTSAINAFVNAYNGYVTTAKSLSSY-------DPN 307 Query: 306 SSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT---LAQIGITTDPSDGKLELDADKL 362 +S+ G LLGD+ L TI + L + +S V + S T LA IGI +DG L++D+ L Sbjct: 308 TSTAGPLLGDAMLNTISSGLATAISGGVKTGSPSTTYSLAAIGINLQ-ADGTLQVDSTAL 366 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDY 422 AL ++ V AL T+GV +TLNKL Y Sbjct: 367 NTALTSNSPTVAALF----------------------------NTTNGVGQTLNKLVNTY 398 Query: 423 NAASDRIDAQ-------------------------VARYKEQFTQLDVLMTSLNSTSSYL 457 A+ ID + A+Y QFT L+ LM ++ + + YL Sbjct: 399 TQANGLIDQRTTALNADLKNLSNQATQLKNYSDQLTAQYNAQFTALNNLMATMANNTKYL 458 Query: 458 TQQF 461 TQ F Sbjct: 459 TQLF 462 >UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Filament cap protein) n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZCP1_9GAMM Length = 687 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 131/396 (33%), Positives = 209/396 (52%), Gaps = 31/396 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+S++S G+GSGLD+++I+ ++ A+K L+ I+ + + TA +SAYG L L F++ Sbjct: 1 MSSVTSTGLGSGLDINAIVGAIVGAEKDPALSKITKEDAKATAIISAYGLLNGDLDDFKS 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + L+ + FSA S +SS T+ T G A G + + AQAQTL + + Sbjct: 61 SYKDLAYSSTFSAASASSSDTSILDTKLGVGAQTGTWQFEIKQKAQAQTLVSGANSSFSS 120 Query: 119 TAIATSDSKLTIQQGG------------DKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 + ++++ G D+ I I N+SL G+R+ INN V+A Sbjct: 121 VKDPIGEGVISLRFGAYNEDGSDFSVNADRPIEKITIDGKNNSLEGLRNTINNGDYSVNA 180 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVS--GDDALQS---FMGYDASASSNGMEVSVA 221 SIIN GN YRL +TS TG +NA+ ++V+ DAL S + +A+ +E + Sbjct: 181 SIINDGN-NYRLVLTSKTTGKENALEITVADANGDALPSSNALNNFTYTATQKNLEQTSL 239 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWV 279 AQ+A + +N + I SN I+ +E +TLN+N T + TL I D SK + I+ +V Sbjct: 240 AQDAIIVMNGIQITRDSNEITSVIEGVTLNINGETAPGKKVTLKIDADNSKVKEQIEAFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 YN+ + LT Y +++ +NG L GDST+R I++ ++ +L+ V S Sbjct: 300 ENYNATFAKMNELTSYKG------AKADNNGVLNGDSTIRNIKSMMRGVLNTQVKHIQGS 353 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 + A +GI T DG LEL++ K ALK D G+ Sbjct: 354 IHSFADLGILT-KRDGTLELNSSKFEDALKNDMQGI 388 >UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=Photobacterium RepID=D0YZ92_LISDA Length = 462 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 135/463 (29%), Positives = 238/463 (51%), Gaps = 31/463 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+ G+ SGLD++ + L AA++A I QQ +LS YG +KSA++ + Sbjct: 3 LSAGGLASGLDITGMTQQLVAAERAPKEQRIKEQQQKVGVQLSGYGQIKSAVSGLEDMVK 62 Query: 63 ALSKADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRD-DTKTA 120 ++ +F+ S SS ++F A A G Y I V LA++ + + D D K Sbjct: 63 KFTEDKVFAGQSAESSESSFVDVKASAEAKNGTYNIEVLALAKSHKIVSNNAFDSDPKAE 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + + +T+ D +++ I SSL + AINNA GV+A++IN G ++ Sbjct: 123 LGSGTLDITV----DGKTMSLTIDKNKSSLKEVVSAINNASDNPGVTATVINDEKGA-KI 177 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-ASSNGMEVSV-AAQNAQLTV-NNVAIE 235 +S+ TG+ N +++ S D + +D S ++N + + A +AQ+ + N+ + Sbjct: 178 VFSSSQTGVKNQISIDASKMDGELKKLSFDPSNITANPEMIQMQAGVDAQIRIDNHTVVS 237 Query: 236 NSSNTISDALENITLNLNDVTTGNQT----LTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 N SN D +E +TL++ +T + IT +TS A+ AIK++++AYN IDT S Sbjct: 238 NDSNKFEDVIEGLTLDIKKLTNTEDVKSAKIDITNNTSGAKKAIKEFIDAYNGFIDTSES 297 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN--TVSSSSYKTLAQIGITTD 349 L+KY ++++ S+G L GDS R+I +Q+++++++ V++ SY L+ G+TTD Sbjct: 298 LSKY-------NTETKSSGPLNGDSLTRSIISQMRNLMNSGVEVNNQSY-YLSDFGVTTD 349 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAAT 408 GK+E+D +KL ALK + A K G + S+ S+T G I Sbjct: 350 RY-GKIEIDDEKLDDALKDNFKAFNAFF--HTKDDGFLDKSEAIFKSFTSSTDGSITQKE 406 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + + +L D + ++R+ A R +QF+ +D + +N Sbjct: 407 KSLKEQQQRLNDDMSDLNERMKAYEERTYKQFSAMDAAIGKMN 449 >UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IYG0_COMTE Length = 480 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 139/484 (28%), Positives = 234/484 (48%), Gaps = 42/484 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 3 ISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQLDK 62 Query: 64 LSKADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L+K + + TSS +A A TA NA+ Y + V+ +A QT+ + +T Sbjct: 63 LAKPATWLGNTLTSSNSAQVAGTATSNAVQATYDVKVSQMASGQTIGSSLVTSNTTLGAG 122 Query: 123 TSDSKLTIQQG-----------------GDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T LTI G G T+ I+ ++SL+ I IN K VS Sbjct: 123 T----LTISMGQWDSKAIGGFKANTNKDGSDVKFTVTITDTDNSLAKIAAKINAEKGDVS 178 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM--GYDASASSNGMEVSVAAQ 223 A+++ GE RL + S TG ++A + +G LQ F G DA+A+ GM+ S AQ Sbjct: 179 ATVLTDHTGE-RLVLQSKTTGTNSAFKVEATG-AGLQQFAYNGTDAAANETGMKRSAIAQ 236 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLND---VTTGNQTLTITQDTSKAQTAIKDWVN 280 + T+N + + + +N + +TL ++ +TI DT+ A+TA+K+ V Sbjct: 237 DTLATINGIEMASHTNVFEEVAAGVTLTVSQKMAAADAPVRITIANDTATAKTALKNLVE 296 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-VSSSSYK 339 +YN+L + ++T Y D S + G L GDST +Q+ ++ +LS ++ Sbjct: 297 SYNALSNALKTMTAY-------DKDSKTAGTLQGDSTAVNLQSAMRRLLSGPGGEGGAFT 349 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI---VGDGKKTGITTTIGSNLTS 396 +L+Q+GI +DG L++D KL AL KD + V D + G+ + + Sbjct: 350 SLSQMGIAFQ-TDGTLKIDDTKLDKAL-KDPESMSKFFTADVADANQDGLAVRMKDFTSG 407 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 L+T G + + L + T D + R+ A AR + Q+++LD M SL S +Y Sbjct: 408 LLATGGTFSTKDETLKNALKRNTADQERQTARVTAYEARVRAQYSRLDTQMASLKSLDTY 467 Query: 457 LTQQ 460 ++QQ Sbjct: 468 VSQQ 471 >UniRef50_A4G682 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G682_HERAR Length = 662 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 134/398 (33%), Positives = 214/398 (53%), Gaps = 39/398 (9%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 +L VGS +D+++I++ L A++ L ++ +++S ++LSAY +L SAL+TFQ L+ Sbjct: 2 ALTVGSAMDVNAIVEQLMVAEQKPLKLLATKEASHKSRLSAYSSLSSALSTFQGKLADLT 61 Query: 66 KADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTR------------- 111 F + ++S + TAG+ A AG+Y I VT LAQAQ+L++ Sbjct: 62 NLSRFQKNTISTSEAGIATVTAGSTAKAGQYNIDVTQLAQAQSLSSAGQASANGSIGSGA 121 Query: 112 ---------TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 T T T + S + T G + ITID +N+SL GIRDAIN A Sbjct: 122 TTTITFQFGTIAGGTLTGGSYSGASFTSAAGKNSGSITID--GSNNSLQGIRDAINKADL 179 Query: 163 GVSASIINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GV+ASI++ G + +RL +TS +TG ++++ ++V GD AL S + D + + + A Sbjct: 180 GVTASIVSDGSDTPHRLVLTSTETGANSSLKITVDGDAALSSLLSQDPVGTQQ-LRENAA 238 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 ++A T++ + I+N SNT+ +E + + L + G T+++T+DTS +A+ +V A Sbjct: 239 GKDALATIDGIEIKNPSNTLDKNIEGLNITLAKI--GKTTVSLTRDTSSITSAVNAFVTA 296 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYK 339 YN L T T Y A ++ + G L+GD+T RTIQ ++ M S + K Sbjct: 297 YNELHGTLKYQTSYNA-------ETKTGGPLVGDATARTIQLGIQRMFSTQPEGLTGELK 349 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 L+QIGI+ DG L LD KL A+ K +G L Sbjct: 350 NLSQIGISFQ-KDGTLALDNAKLQTAVTKFPDDIGRLF 386 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 52/82 (63%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G T + L ++L ++G+I TDG+++ + +L A + R+ ARY++Q++ LD Sbjct: 578 GYATNLQGLLGNYLGSSGMIAGRTDGINENIKQLNNQRTAINTRLIDIEARYRKQYSSLD 637 Query: 445 VLMTSLNSTSSYLTQQFENNSN 466 VL++++ +TS+YLTQQ SN Sbjct: 638 VLLSNMGATSNYLTQQLAALSN 659 >UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax=Anaeromyxobacter RepID=Q2IQN2_ANADE Length = 452 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 145/468 (30%), Positives = 230/468 (49%), Gaps = 35/468 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 AS + G+ SG+D ++I+D L A + L + +Q++F ++SA G + ++L+ A Sbjct: 3 ASFRAGGLASGMDTNAIIDQLVALESRPLDQLRRRQAAFRTQISALGDIAASLSGLSAAA 62 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + AT S++TAFSA +AIAG Y ++V LAQ R+ + Sbjct: 63 ADLGDHGVL-ATQARSTSTAFSAAPGADAIAGSYRLAVKALAQPAKW--RSAAFAAGAGV 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 A +LT+ QG PI + A SL+ + AI + A VSA +++ G + LSVT Sbjct: 120 AGGTLRLTV-QGTAVAPIAVPDGA---SLADVAYAIRQSGAAVSAVVLDDGTSSW-LSVT 174 Query: 182 SNDTG--LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA----AQNAQLTVNNVAIE 235 + DTG LD A DAL + + SA + G A A+NAQ+ V+ + Sbjct: 175 ARDTGHPLDGAPA------DALS--ISFTPSAGAVGQAPGFAELQPARNAQVEVDGLTFT 226 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 + N I+DAL +TL L + L + D + Q ++ V+ YN ++ L ++ Sbjct: 227 RTGNVIADALPGVTLTLAAAGGPAEDLVLGTDPAGTQARLQKLVDGYNGVMRL---LQRH 283 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDG 353 AV +D ++ L GDSTLRT+Q +L+ +L V SS +TLA +G+ T DG Sbjct: 284 LAVAKDSDRATT----LAGDSTLRTLQARLQRVLVTEVPGLSSGVRTLADLGVRTG-RDG 338 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW-LSTTGIIKAATDGVS 412 L +DA L++AL +D + AL G TG+ + + + + G + DG+ Sbjct: 339 SLSVDAATLSSALARDPAAANALFSTSG--TGLAAVVKALVADHTRAGDGALVLRQDGLG 396 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 +T+ L A RIDA QFT ++ ++ L S S+L Q Sbjct: 397 RTVKDLDGQAAALQLRIDAFQQNLIRQFTAMESTVSGLKSIGSFLAGQ 444 >UniRef50_Q5ZVV2 Flagellar hook associated protein 2 FliD n=5 Tax=Legionella RepID=Q5ZVV2_LEGPH Length = 541 Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 157/550 (28%), Positives = 243/550 (44%), Gaps = 108/550 (19%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP----ISNQQSSFTAKLSAYGTLKSALTTFQT 59 +SS GVGSGLD+ +++D++ A+ +TP Q +S +LSA G LKS LT QT Sbjct: 3 LSSPGVGSGLDVKNLVDAIVTAE---ITPSQVRHDKQLNSVNTELSALGQLKSYLTNLQT 59 Query: 60 ANTALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL----TTRTTR 114 + LS + ++ ST S FSAT A Y I + LAQ +L T T Sbjct: 60 SLAKLSSLSQFYTMKSTISDPNYFSATLGTGATKNTYQIEIQKLAQQHSLASSYMTNTGS 119 Query: 115 DDTKTAIATSDS-KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 T +S K T + I I+ N SL +RDAINN +G++ASI+ Sbjct: 120 GTITIDFGTYNSDKTTFTPNPSATSVNITITPGNDSLVAVRDAINNTNSGITASIVQDSQ 179 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 G RL++TS+ TG + AM +SG A + YD + N + +VAAQN+ + +N + Sbjct: 180 GS-RLTITSSKTGENYAM--KISGGVA---SLNYDPTMGVNSLTETVAAQNSTVKINGLT 233 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA--IKDWVNAYNSLIDTFSS 291 + SSN +++A+ +T++L G + +T+T D +K Q I +++ YN DT + Sbjct: 234 LVQSSNQLNEAITGVTIDLKKAEIG-KIVTLTVDDNKDQLTGLINEFIKQYN---DTMTF 289 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTD 349 LT T G ++++ G GD R ++ L + +++ ++LA +GI T+ Sbjct: 290 LTNLT----GYNNETKQGGVFQGDPQFRNLKLNLNKWATTPLANQEGPIRSLADLGIITN 345 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGK---------------KTGITTTIGSNL 394 G LE+ DK AL +GAL K K+G + + Sbjct: 346 -KQGLLEIKQDKFKTALDNHYKEIGALFAKTAKANDTGINVKSINSTVKSGTYDVVLTEF 404 Query: 395 TSWLSTTGIIKA------------------------------------ATDGVSKTLNKL 418 T +S +G I TDG++ L+ L Sbjct: 405 TPGVSMSGTIGGLSAISSDGITLTGSADLSGLSINVFSGSAGSRGQITVTDGIAVQLSSL 464 Query: 419 TKDY-------NAASDRIDAQVA------------------RYKEQFTQLDVLMTSLNST 453 Y D+++ QV RY +QFT LD L++ L ST Sbjct: 465 LDAYIEIKGDLEQRKDQLNNQVKQLNKIQNEIDIRRKSIETRYLKQFTALDTLLSQLQST 524 Query: 454 SSYLTQQFEN 463 S +L+QQ N Sbjct: 525 SVFLSQQLAN 534 >UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEJ5_9BURK Length = 472 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 152/472 (32%), Positives = 250/472 (52%), Gaps = 24/472 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD++SI+ L+A +K L + + ++ +LS G ++S ++T +A + Sbjct: 2 AISSTGLGSGLDVTSIISQLSALEKQPLKSLQTKATTLQTQLSTVGVIQSQVSTLASAAS 61 Query: 63 ALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + T+ TSS T+A SAT A A Y+I V+ LA+AQ+L TT T Sbjct: 62 KLGSVLSWKGTTATSSNTSAVSATAGTGAAAASYSIEVSKLAKAQSLALPTTVGSTALPA 121 Query: 122 ATSD---SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-GVSASIINVGNGEYR 177 AT L+IQ G + ++I+I+ +L+ I IN GV+AS+I+ G+G+ Sbjct: 122 ATDQLGYGTLSIQVGSNA-AVSINIADGEGTLAQIAAKINGVSGLGVAASVISDGSGKVN 180 Query: 178 LSVTSNDTGLDNAMTLSVS----GDDALQSFMGYDASASSN-GMEVSVAAQNAQLTVNNV 232 L + + +TG D A T++ + G ++ S + + + N M + A QNA+ T+N V Sbjct: 181 LMLRATNTGSDGAFTVTATEGTGGSVSVPSNLSRLSYTTGNFAMAQNQAPQNAEATINGV 240 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 A+ +S NT+++ ++ + L L+ VTT +T+ +DT+ I+D++ AYN+L T + Sbjct: 241 AVSSSKNTLTNVVDGLNLTLSQVTTTAVDVTVAKDTAGMTKTIQDFIGAYNALNQTLNDA 300 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPS 351 T Y D+ + + GAL GDS +Q L+S++ T S+ S++ LA IGI+ Sbjct: 301 TAY-------DAATKTAGALQGDSVATGLQRALRSLVGATSSTGSTFSRLADIGISAKLG 353 Query: 352 DGKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 G LEL++ KLT+A D S + L G G I L+ TG + T Sbjct: 354 -GDLELNSTKLTSAF-SDVSNLQLLFTNFGGSDASNGFGLRIKDFANGLLAATGTVTNKT 411 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + V K ++ + + + R R K Q+ LD M SL + +SY++QQ Sbjct: 412 NAVKKAIDLNSTEQTKVNTRASNLETRLKAQYAALDTKMASLTALNSYVSQQ 463 >UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas putida KT2440 RepID=Q88ES7_PSEPK Length = 452 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 146/461 (31%), Positives = 242/461 (52%), Gaps = 31/461 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS + G+GSG+D SI+ +L A+KA I+ QQ + T ++SA G +K+AL TF++ Sbjct: 1 MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60 Query: 60 ANTALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A L+ + F+ + TSS + AT +A AG Y + VT LA + +TT Sbjct: 61 AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVS 120 Query: 119 TAIATSDSK--LTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNG 174 + + S LTI Q +TI A +L +RD IN G++A+I+ G Sbjct: 121 SVVNNSGDPQTLTISQSSADYNVTIPDGA---TLQQVRDLINKQLGSQGINANILTDAKG 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 RL ++S+ TG + +TLS GD +L A A QNA+ T++ + + Sbjct: 178 S-RLVMSSSTTGEGSDITLS--GDSSLVQNATPGAPA-----------QNAKYTIDGLEL 223 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 E+ SNT++ A+ + L + G L++ +T+ +T+++ +V+AYN+LI ++ TK Sbjct: 224 ESKSNTVTGAISGVNFEL--LAEGKSRLSVATNTTTLKTSVQSFVSAYNALITAINTQTK 281 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 TA D+ +++ GAL GD+T+R + + +++ L + + S L+Q+GI TD G Sbjct: 282 VTAT---GDASTTTAGALTGDATMRALVSTVRNELVKSTGAGSISMLSQMGINTDQQTGL 338 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 L LD K A+ K A+ + A+ GD G+ + + ++ TTGI+ T ++ Sbjct: 339 LVLDDTKWDKAVAKGAADIAAVFTGD---KGLIKRMTAATDAYTGTTGILATRTKNLNDN 395 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 L +LTK A RI+ A ++ +D L+ LN+TSS Sbjct: 396 LTELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSS 436 >UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYF4_HALNC Length = 468 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 148/468 (31%), Positives = 235/468 (50%), Gaps = 29/468 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS G+GSGLD+ I+ L A+ A I +N+Q++F LSA G LKS+L++ QTA Sbjct: 16 ISFSGLGSGLDIQGIVTQLVNAEGAPQQQILTNRQTAFNTTLSALGQLKSSLSSIQTAVD 75 Query: 63 ALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 A D F + T+T S+++ SA+ G Y + V LA AQ + + T T + Sbjct: 76 AFQNLDTFRTRTATVSNSSILSASAIPGTALGTYQVEVDQLATAQKMASAGYASATST-V 134 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNGE---- 175 + T+ G ++ + AA +L+ IRD IN A GV ASIINV NG Sbjct: 135 GSGTLNFTVGSG----SFSVSV-AATDTLTNIRDNINAATGNTGVQASIINVDNGSGGTV 189 Query: 176 YRLSVTSNDTGLDNAMTL-SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 +L +T+ +TG N T+ +V D +G A AS+N ++S AAQ++ + ++ + + Sbjct: 190 SKLVMTALNTGTSNGFTVTAVDSDGNNTDAVGLSALASNNLTQIS-AAQDSIIKIDGMQV 248 Query: 235 ENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 ++SN++S A+ +TLNL G +T+ D S TA++ V YN T +SLT Sbjct: 249 TSASNSVSTAVTGLTLNLTQAQVGTSVAVTVGTDNSPITTALQTLVTNYNKYQSTNASLT 308 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN--TVSSSSYKTLAQIGITTDPS 351 Y D ++ GALLGD T + L+S++ T S++ + LA IGI D Sbjct: 309 SY-------DQTANQAGALLGDVTATGVNNALRSLMGQNYTTGSTTIQNLADIGIQVD-K 360 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 +G + LD KL AL D + V L+ G++ + S L +L G+ + T + Sbjct: 361 NGVMSLDTTKLNQALAADPNVVKTLLT--DPTNGVSAKVDSVLNPYLQYNGVFDSRTASI 418 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + L +T R++ QFT +D + +N + S+L++ Sbjct: 419 NSQLKTITTQQADLQARLNQYQTSLMAQFTAMDSYVAQMNQSMSFLSK 466 >UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK2_9SPHN Length = 471 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 155/478 (32%), Positives = 258/478 (53%), Gaps = 31/478 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++LG GSG+D SS++ SL +A + + I+++QS ++++SA + S+L TF A T Sbjct: 9 LTALGAGSGIDTSSLVSSLVSATRDPKESAITSRQSLNSSRISALASAVSSLDTFADALT 68 Query: 63 ALSKADLFSATSTTSSTTAFSATT-AGNAIAG-KYTISVTHLAQAQTLTTRTTRDDTKTA 120 + ++ T+ ++ ++ S T +G + AG + V LA A+ L++ T T ++ Sbjct: 69 EVLSGAAYTGTAASNDSSIASVTLLSGGSPAGLPAQLIVDQLATARVLSSTATAGATGSS 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 + S G+ ITID S N+S +G+ AIN A GV+A ++ NG RL V Sbjct: 129 AVGTGSFTITNAAGEATTITIDSS--NNSFAGLASAINAAGTGVTARVVTDTNGT-RL-V 184 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDAS-ASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TG N ++S S DD+ G S A S M + A QNA++T++ VA E +SN Sbjct: 185 FKGETGAANDFSVSTSADDSGSVLAGLGWSGADSATMSSTSAPQNAKITLDGVAYEYASN 244 Query: 240 TISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 T+ A++ + ++LN + G TL++TQ T+ +K++V+AYN+L+ + TA Sbjct: 245 TVDGAIDYLRIDLNKASPGTTVTLSMTQPTAGLSDLLKEFVSAYNTLMTALN-----TAT 299 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSSSYKTLAQIGITTDPSDGKLEL 357 GAD SSS G L G S +R ++ QL ++ S + S+ +YKTLA IG+ T+ DG L L Sbjct: 300 ATGAD--SSSAGVLNGVSGVRDMKRQLAAITSTPLGSTGTYKTLADIGVATN-RDGTLSL 356 Query: 358 DADKLTAALKKDASGVGALI---VGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 D D L A++ D GV ++ V G+ + + S S G +K A + Sbjct: 357 DTDMLAKAMEADPEGVTNMVNPKVSTAANPGLASLMDSVRDSIEKDDGPLKLA----QER 412 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQ----LDVLMTSLNSTSSYLTQQFE--NNSN 466 L +D+ ++D Q+ Y+E T+ ++ +++L +T SYL QQ + NNS+ Sbjct: 413 YGALAEDFTEQLSKLDDQMTNYQEHLTKVYAAMETRLSALKATQSYLEQQIKVWNNSD 470 >UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICA8_VIBHO Length = 458 Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 126/461 (27%), Positives = 245/461 (53%), Gaps = 31/461 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+ G+GSG+D++SI++ + A+++ I + +SAYG LK++L T + Sbjct: 3 VSATGLGSGIDINSIVNKIVEAERSPKQERIVKGLNDVETNISAYGRLKTSLDTMKDLMY 62 Query: 63 ALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + + F+A ST SS A SA+ A+ G Y+I V LAQ+ L + DT Sbjct: 63 DFRRNNTFAARSTVSSNEEAVSASADHQAVTGVYSIDVQQLAQSHKLVSDGLDADTDFGA 122 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLS 179 +LT+ GG TIDI A +S+L + +IN++ G+ AS+IN +G RL Sbjct: 123 G----QLTLSLGGRT--TTIDIDANSSTLLDVVRSINSSANNPGIKASVINDDSGA-RLI 175 Query: 180 VTSNDTGLDNAMTLSVSGD--DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA-IEN 236 + + TG +N ++++V+ LQ+ + Y+ ++++N M AA +A++ ++ +A + + Sbjct: 176 LGGDKTGAENQISVTVNAPVSSPLQA-LAYNPASATNSMNEMQAALDARILIDGLASVTS 234 Query: 237 SSNTISDALENITLNLNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +NT SDA+ + +++ +T+ G+ T+ + +D K + +++++V+AYN+ +L+ Sbjct: 235 DTNTFSDAIRGVNIDVAQLTSAPEGSVTIKVEEDRDKVKASLEEFVDAYNAFYQVTKALS 294 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPS 351 KY D ++ G L+GDS +R+ Q++S+ S+ + + +S +TL+++GI+T Sbjct: 295 KY-------DPETRQGGPLVGDSVIRSAVNQMRSLFSSPIEGAPNSLRTLSELGIST-TM 346 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 +G+LE++ D L L ++ GAL G G + + ++ G I+ + Sbjct: 347 EGRLEINYDLLDKQLTRN---YGALEGFFGGNQGFARKLEETVQNFTGVDGAIRNRETSL 403 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 +L + + R++ R +QF+ +D M + S Sbjct: 404 GDQRIRLQDEQDNLDRRMEDLENRTLKQFSAMDSAMAQMQS 444 >UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID2_PSEAE Length = 474 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 142/474 (29%), Positives = 243/474 (51%), Gaps = 30/474 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA IS +GVGS D + +++ + + A T ++ + + T +L+A G KSA++ FQT Sbjct: 1 MAGIS-IGVGS-TDYTDLVNKMVNLEGAAKTNQLATLEKTTTTRLTALGQFKSAISAFQT 58 Query: 60 ANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A TAL+ +F A T+ +S+ A+ +A+AG Y I V LA + + + D Sbjct: 59 ALTALNSNAVFMARTAKSSNEDILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPAN 118 Query: 119 TAIATSDSKLTIQQGGDKDP-ITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGE 175 + L I G K P IT+D ++N++L+G+RDAIN A +AGVSA+II +G Sbjct: 119 AKF--NSGTLNISVGDTKLPAITVD--SSNNTLAGMRDAINQAGKEAGVSATIITDNSGS 174 Query: 176 YRLSVTSNDTGLDNAMTLSV----SGDDALQSFMGYDASASSNGMEVSVA-----AQNAQ 226 RL ++S TG + + V SG + S + +D + + + + A A N + Sbjct: 175 -RLVLSSTKTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLSDGAAAGYVTKAANGE 233 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNS 284 +TV+ + +SN++SD ++ ++ ++ VT + TLT+++D + + +K +V AYN+ Sbjct: 234 ITVDGLKRSIASNSVSDVIDGVSFDVKAVTEAGKPITLTVSRDDAGVKDNVKKFVEAYNT 293 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI 344 L + T T V + ++ GALLGD+++R + ++S L + + S + LA + Sbjct: 294 LTKFINEQTVVTKV---GEDKNPVTGALLGDASVRALVNTMRSELIASNENGSVRNLAAL 350 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 GITT DG LE+D KL A+ D GV + GD TG+ +G + + GI+ Sbjct: 351 GITT-TKDGTLEIDEKKLDKAISADFEGVASYFTGD---TGLAKRLGDKMKPYTDAQGIL 406 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T + KTL+ + + R+ A + QF L + + +T Sbjct: 407 DQRTTTLQKTLSNVDTQKADLAKRLAALQEKLTTQFNLLSAMQDEMTKRQKSIT 460 >UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alteromonadales RepID=Q485N1_COLP3 Length = 478 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 130/492 (26%), Positives = 249/492 (50%), Gaps = 52/492 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISN-QQSSFTAKLSAYGTLKSALTTFQT 59 M ++ G+GSGL +S I++++ A+KA +N QQ+ T +SA G LKSAL + ++ Sbjct: 1 MPDLTFTGIGSGLKVSEIVNAIVGAEKAPFISRANKQQAEMTTDISAIGALKSALESVES 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + ++L+ AD + + + + + + + +A G Y++ V L+Q+ L + +D + Sbjct: 61 SISSLADADNYQLRTASGADSFVGLSASKDAQIGNYSVKVDVLSQSHKLMSGAMAEDEQV 120 Query: 120 A-----IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVG 172 IA +++ I +A+ +LS IRDAIN++ V A+I+ Sbjct: 121 GEGTLNIAVAETNFNIA------------VSASDTLSDIRDAINDSDDNESVIATIVTDD 168 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDD--------ALQSFMGYDASASSNGMEVSVAAQ- 223 G++ L +TS +TG+ NA+T +V+ D S + YD S + + + Q Sbjct: 169 AGQH-LIMTSKETGVANAITTTVTDLDDNNNVDGLVGLSRLAYDVSDPDDSLHIKNLTQI 227 Query: 224 ----NAQLTVNN-VAIENSSNTISDALENITL---NLNDVTTGNQT--LTITQDTSKAQT 273 +AQ+T++ + + +S+N + ++ + + ++DV + ++ ++ ++ Sbjct: 228 DEAVDAQITIDGTLVVTSSTNEFKNVIDGVDITAKKMHDVDDNDDVSRISFKENNGNIKS 287 Query: 274 AIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT- 332 ++ +V +YN L L+K GA +S S G L GDS LR + +L+ S Sbjct: 288 GLEGFVKSYNEL----QVLSKQL----GAAGESGS-GPLAGDSLLRGVMGKLRQQFSQAF 338 Query: 333 -VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 + + + +L+Q+G+ +D G L LD + L + D +GV VG + G +++ Sbjct: 339 DMGNGNSMSLSQLGVESDQY-GVLSLDTETLNEYIDSDVAGVQQFFVGTDSENGFASSLE 397 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + T G+I+ D + L++L DY A R+D+ AR +Q+ +D+++ +LN Sbjct: 398 ELTGFYTDTDGVIQNRIDSGTSQLDRLDDDYLAFERRMDSLEARLFKQYNAMDLIVANLN 457 Query: 452 STSSYLTQQFEN 463 STSS+L Q +N Sbjct: 458 STSSFLLAQLDN 469 >UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTZ6_9BURK Length = 549 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 128/399 (32%), Positives = 200/399 (50%), Gaps = 53/399 (13%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M ISS G+GSGLD+ I+ SL AA++ LT +S ++++ K+S YG +K++ + A Sbjct: 1 MVGISSAGIGSGLDIEGIISSLMAAERIPLTKVSQERTAINTKISIYGIIKNSFADLKAA 60 Query: 61 NTALSKA-DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS +L +T+S SA+ + G Y+I V+ LA+AQ++ + Sbjct: 61 ADKLSSLNNLNPLKATSSDEKIVSASASAAGAKGSYSIEVSQLAKAQSVAAQ-------- 112 Query: 120 AIATSDS-----KLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKA 162 +AT+D+ LTI G DK P+TI+I +L GI+ AIN++ A Sbjct: 113 GVATADTTVGTGSLTITLGSYDSGTNTFTNNADKTPVTINIGTGQQTLDGIKQAINDSDA 172 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASAS---- 212 GV+ASI+N G G RL +TS +TG N L V+ D S + YD +A+ Sbjct: 173 GVTASIVNDGAGS-RLVLTSKETGAVNGFKLEVTDADGNNTDTTGLSRLAYDPTAAVGAG 231 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQ 272 N + V AQNA T+NN+ + +SNT++DA+ +TLNL TT L + D + + Sbjct: 232 KNADTLQV-AQNANFTINNLPVSKASNTVTDAVAGLTLNLKAQTTSPVNLEVGLDDTALK 290 Query: 273 TAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 T + +V AYN + Q + L ++T T++ L+++L Sbjct: 291 TTLDGFVTAYNKIRGNLK-------------DQQQKDATLSRETTPSTLERGLRNILREQ 337 Query: 333 VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 V+ L+ IG++ D DG L L+ KL A+ D S Sbjct: 338 VAQYGIG-LSDIGLSFD-KDGVLSLNKTKLDTAVAADPS 374 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 21/122 (17%) Query: 345 GITTDPSDGKLELDADKLTAALKKDASG-VGALIVGDGKKTGITTTIGSNLTSWLSTT-- 401 G T DPS+G L ++ + ASG +G + G + L+ W+ + Sbjct: 437 GATGDPSEG--------LQFSVVQGASGNMGTITFSKG--------LAERLSDWIGSLTD 480 Query: 402 --GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 G + + TDG++ ++L + + R++ RY+ QF+ LD ++ S+ TSSYL+Q Sbjct: 481 EGGTLVSRTDGLTSRKSRLDDQEDRLNLRLEQVEKRYRAQFSALDSMLASMQQTSSYLSQ 540 Query: 460 QF 461 Q Sbjct: 541 QL 542 >UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseudomonas RepID=Q4KG76_PSEF5 Length = 484 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 159/493 (32%), Positives = 256/493 (51%), Gaps = 48/493 (9%) Query: 1 MAS--ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTF 57 MAS + G+GSGLD +I+ +L AA KA I ++ +A +S GTL+S L+TF Sbjct: 1 MASPILPGTGLGSGLDTGAIVKALVAADKAAKQGQIDRATTTNSASISGIGTLQSLLSTF 60 Query: 58 QTANTALSKADL----------FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT 107 Q+ LS A L F+ATS+ S T AT A+AGKY+++V +LA + Sbjct: 61 QST---LSVAGLGSSVNPAFAGFAATSSDSKT--VDATADNYAVAGKYSVTVKNLATSSK 115 Query: 108 LTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAK---AG 163 + + +AI + L I Q G P+T+ AN++L +RD+IN ++K AG Sbjct: 116 VASAAFSGGNTSAIPSG--TLNITQNGINYPLTV---GANATLQSVRDSINADSKMNMAG 170 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ----SFMGYD---ASASSNGM 216 +SA+I+ G RL + S TG +SVSG L+ M D ASA+S+G Sbjct: 171 LSANIVTDSFGS-RLVIGSEKTGA--GTDISVSGIAGLEIDGTQPMSSDTNPASAASSG- 226 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 + A++A +V+ + + + +NT++ A+ + LNL TT T+T+ +T +T+I+ Sbjct: 227 NIGGLAKDAVFSVDGMQLTSKTNTVTQAISGLKLNLVAPTTTPITVTVATNTEGLKTSIQ 286 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 +V+AYN++ + ++LTK + D+G + + L GDS R+I +++ LS T + Sbjct: 287 KFVDAYNAVANGITTLTKPSLDDSGNPTIPAQ---LTGDSLPRSILAAIRAPLSETGAGD 343 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAAL--KKDASGVGALIVGDGKKTGITTTIGSNL 394 LAQ+GITT+ G L+ D K TAA+ KK V L GDG G+ + + + Sbjct: 344 KLTVLAQLGITTNQKTGALDFDDKKFTAAMTDKKLGGEVQKLFTGDGTNPGLLERMTNAI 403 Query: 395 TSWLS-----TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + T GI+ T + T KL+ +A R+ A +++ +D L+ Sbjct: 404 KPFTQGVGSMTEGILTTRTKTLDITKKKLSDQQDALDRRVATLTAVLTKKYNDMDTLVGK 463 Query: 450 LNSTSSYLTQQFE 462 L +T+S +T FE Sbjct: 464 LKATASNITSMFE 476 >UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aeromonas RepID=FLID_AERPU Length = 464 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 142/471 (30%), Positives = 243/471 (51%), Gaps = 34/471 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+S G GSG+DL S++ + +A+KA L PI +Q+S LS G LKS+++ F Sbjct: 2 AITSAGAGSGIDLESVISASVSAKKAQLQQPIITKQNSTQITLSGIGQLKSSISAFTDIL 61 Query: 62 TALSKADLFS--ATSTTSSTTAFSATTAGNAIA--GKYTISVTHLAQAQTLTTRTTRDDT 117 LS F+ A + T S G + A G+Y I V L A+T D + Sbjct: 62 DKLSAPGAFNKRAINITQSKDDPILKVEGKSGASNGQYNIIVNKL--AETSRQEGIFDSS 119 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGE 175 T +AT D +LT + GDK +D+ A + +L IR +IN+ G+S +I+N +G+ Sbjct: 120 TTPLATQDGQLTF-KAGDK-TFKVDVKAGD-TLQDIRKSINSNGDNFGLSVNIVNTADGK 176 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 +L + S +G + L+++GD+A L F A M + AA +A++ V+ + Sbjct: 177 AKLVIDSGISG--DGKDLTITGDNAELGVF-----EAGGGVMSQTRAASSAEINVDGNVL 229 Query: 235 ENSSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYNSLID 287 ++ +NT D+++++ + + V+ + + IT D + Q ++ +V+ YN+L D Sbjct: 230 KSDTNTFDDSIQDLKVTVLRVSDKDSAGDLKANKVDITTDKTSIQELVQQFVDGYNTLQD 289 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-SNTVSSSSYKTLAQIGI 346 +SL K G + GAL GDST R I++ + ++L S + +S +Y T+ +IGI Sbjct: 290 KMNSLGKRNTFVGGV--KQDDGGALAGDSTTRAIESFMSNLLVSPSQNSGTYSTVFEIGI 347 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 D + GKL LD K A+ K+ V AL G + G+ +T+ S L + + G++ Sbjct: 348 KMD-NKGKLSLDKTKFGEAVDKNFDQVVALF---GGEKGLASTLNSGLKEYTKSGGMLAQ 403 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 D ++ L LT+ A+ ++ A + Q+ LD L+ +NS++S L Sbjct: 404 REDVLNSDLRALTQKTATANAQLTKYEAALRAQYGSLDALLVKMNSSASAL 454 >UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax=Geobacter RepID=Q39YI7_GEOMG Length = 487 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 62/496 (12%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G+ +GLD SSI+ L ++ + +Q + ++S + +++AL +FQ Sbjct: 16 MANISISGLVTGLDSSSIISQLMQLERTPERIMKAKQQKYQNQISEFQKIETALKSFQKV 75 Query: 61 NTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + F + TT + + +A+ + A G +T+ VT LA+ Q + T Sbjct: 76 VKGFNTLGNFKSMQTTVADNSVLTASGSSTATPGTHTVQVTTLAKNQRQVSMGVASQTDK 135 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG-EYRL 178 T +T G T+ I+ +SL I AIN + A V+ASIIN G+ YRL Sbjct: 136 VFNTGSFTITDSAG---KTTTVSIAEGQNSLGDIVSAINTSGANVTASIINDGSPTPYRL 192 Query: 179 SVTSNDTGLDNAMTLSVSG---------DDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 VT DT N TL SG L + +G + G A L V Sbjct: 193 VVTGKDT---NNYTLDFSGLTTPPAGGTGSLLPTMLGPSDPSYQAGTA-------ATLVV 242 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAIKDWVNAYNSLIDT 288 + + + +SNT++DA++ ITLNL + G+ T + + DTS I +++++YN +I+ Sbjct: 243 DGITMTKTSNTVTDAIQGITLNL--LKEGSTTTVNVANDTSAVTNKINEFISSYNDVINL 300 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGI 346 + + Y + + + G L GDST+RTIQ++L+S+LS TVS + Y +LA +GI Sbjct: 301 VNKQSIY-------NPDTKTAGVLSGDSTVRTIQSKLQSLLSTTVSGVTGPYTSLASLGI 353 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN------------- 393 T+D DG L +D+ L++AL + V L TG TT+ SN Sbjct: 354 TSDKKDGTLSVDSTALSSALSTNFEAVADLFT---HNTGTYTTLPSNQYGIAQQFNLAID 410 Query: 394 ------LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 + + +ST G+I+ G++ +++ + ++ RI+ + + QFT ++ + Sbjct: 411 SMVSPYIGTGVSTNGLIETRIKGLNTSISDINDQIDSLESRIEKMQSNLQLQFTNMETTV 470 Query: 448 TSL----NSTSSYLTQ 459 + L NS SYL++ Sbjct: 471 SKLQTQGNSLLSYLSK 486 >UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 Tax=Shewanella RepID=A8FXV4_SHESH Length = 457 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 135/460 (29%), Positives = 238/460 (51%), Gaps = 28/460 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTAN 61 ++++ G+GSGLD+++I+ L A+K + ++ + + AK+SA GTLKSAL+TFQ A Sbjct: 2 ALTATGIGSGLDINTIVGVLVDAEKIPKEAMFDKTEKTIDAKVSAIGTLKSALSTFQDAL 61 Query: 62 TALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L L T +T ++ +AT + +G Y + V LAQ + D + Sbjct: 62 EKLQDGGSLNQRTVSTGESSYLTATADKTSQSGSYNVKVEQLAQQHKVAGINVAD---PS 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + + L + G+ +T+ A SL I IN+A GV+A+II G RL Sbjct: 119 LPVGEGSLDLTVNGENFSVTV---GATDSLEDIAKNINSATDNVGVTATIITSDAGS-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 ++S+ G D+ +SV +D + + + D +N E+ V A+N+ + V+ + + + Sbjct: 175 VLSSDTEGTDSQ--ISVVANDTVGTGLN-DMFGGANLTELQV-AKNSIVHVDGQQLTSQT 230 Query: 239 NTISDALENITLNLNDVTTGNQTLT-ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 N + A+ +TL+L D T+ + D + ++ +V+AYNSLIDT L+ Y Sbjct: 231 NEVKGAITGVTLSLTDADLNETTVVKVELDKDAVKDNVQGFVDAYNSLIDTVDKLSSY-- 288 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT-LAQIGITTDPSDGKLE 356 D+ AL GDS +R+I++QL+SM+S+ V L IGI D GKL Sbjct: 289 -----DADKKEAAALQGDSMIRSIESQLRSMISSRVDVGGETVALYDIGIEADRY-GKLS 342 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTL 415 +D+DKL A++++ +G+ L K TG+ + + + S++ TTG+I + + + Sbjct: 343 VDSDKLDTAIEENMTGIEGLF--STKDTGLANRLDTLVESYVKPTTGLIDSRNNAYTSDK 400 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 +L A + +++ AR +QF +D+++ +LN S+ Sbjct: 401 QRLDDQREAFTLKMEQLEARLMKQFNAMDLIVGNLNQQSA 440 >UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WT49_ALIAD Length = 514 Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 125/365 (34%), Positives = 197/365 (53%), Gaps = 35/365 (9%) Query: 10 GSGLDLSSILDSL-TAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+GL ++ + L T Q+ P+ +Q S+ T++ SA +L+SAL TFQ A L+ Sbjct: 31 GNGLPVTQYVQDLQTILQQELEKPLQSQISTLTSQQSALSSLQSALQTFQQATETLASLQ 90 Query: 69 LFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA-----IA 122 +S ++TS+++ S T + A G Y+I VT LAQAQT T T TA +A Sbjct: 91 SWSTVQASTSNSSVLSVTASAGASVGTYSIQVTSLAQAQT--TFQTSGLQSTANGASTLA 148 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + +T P++I+I A SL I +AIN + GV+AS+I+ G Y L++ Sbjct: 149 SGTLVITPNTLNKAQPVSINI-AQGESLQDIANAINEKTTQTGVAASVISNGQNSYFLAL 207 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA----AQNAQLTVNNVAIEN 236 +S TG T++ + + SNG +++ AQNA + V + + Sbjct: 208 SSIQTGQAYGFTVT-------------ETNVGSNGAQIAFQTDTQAQNATIVVGGQTLSS 254 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 S+NT + + N+T+ LN++ T N +T++ DTS A+ A++ W+NAYN+LIDT T YT Sbjct: 255 STNTFQNYIPNVTIQLNNIGTAN--VTLSNDTSGAEKAVQTWMNAYNTLIDTIRQDTAYT 312 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDPSDGK 354 +GA + SSS G L GD + + Q+ + +S+ SS + Y +LA IGI DP+ G Sbjct: 313 PA-SGAKT-SSSAGPLFGDPLTQGLLQQIPAAVSSVASSVASQYNSLASIGIVLDPTTGH 370 Query: 355 LELDA 359 LE + Sbjct: 371 LEFQS 375 >UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K38_SYMTH Length = 476 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 132/494 (26%), Positives = 235/494 (47%), Gaps = 58/494 (11%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SG D +++ +L ++ + +Q AK A+ ++SALT Q+ L Sbjct: 7 GLISGADTETLISALLELERVRIYRQEEKQEQLEAKQKAWRDVRSALTNIQSKLDQLRFP 66 Query: 68 DLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 LF + S + + TA A YT+ V LAQ+ +TT++ + A +D Sbjct: 67 TLFRSRKVELSDNSVATVTADAGAAQTSYTLQVVKLAQSHVITTQS-----EAAYKAADE 121 Query: 127 KL----TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 +L T G D + + +LS + IN A +GV A ++ V G++RL +T+ Sbjct: 122 QLGWAGTFDIGTDPNALKTITVEETDTLSSLAAKINAADSGVLAHVVMVSEGKFRLVLTA 181 Query: 183 NDTGLDNAMTLS--VSGDDA--------LQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +G N + L V G L+ +G +N + +S AQ+A++ +N Sbjct: 182 AKSGSANVIRLENEVPGQPPQGQTYGNLLEDILGL---TGANQLVLS-EAQDAEIILNGE 237 Query: 233 AIENSSNTISDALENITLNL-----NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 ++S+NT + L I + + +DV + +T++ D K +KDWVNA NSL D Sbjct: 238 PYKSSTNTFDNILPGIKITVKKPSGDDVVS----MTVSSDIDKIVQVVKDWVNAVNSLQD 293 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIG 345 L+ Y D + + AL G+S +R+IQ++++ S V+ +S K L+QIG Sbjct: 294 LLKKLSAY-------DVEKKTGAALTGESLVRSIQSRMRQFFSTEVAGMPASMKMLSQIG 346 Query: 346 ITTDPSD----GKLELDADKLTAALKKDASGVGAL--IVGDGKKTGITTTIGSNLTSWL- 398 ++T GK+ +D +KL L++D GV L + DG+K GI + + S L Sbjct: 347 VSTGAYGTADFGKIVVDEEKLREVLQRDPEGVARLFGLNEDGQK-GIAVQMNDYIKSLLD 405 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKE----QFTQLDVLMTSLNSTS 454 S +G ++ +S+ ++++ +D +RI+ Q+ + ++ QF +++ M L Sbjct: 406 SQSGALEVRDKSLSQQIDRI-RD---TIERIEVQLEQREKVLRLQFARMEEAMARLQGQG 461 Query: 455 SYLTQQFENNSNSK 468 +YL S S+ Sbjct: 462 NYLALMLLGRSQSQ 475 >UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 Tax=Pseudomonas RepID=A5W0I8_PSEP1 Length = 470 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 150/481 (31%), Positives = 240/481 (49%), Gaps = 39/481 (8%) Query: 1 MAS--ISSLGVGSGLDLSSILDSL----TAAQKATLTPISNQQSSFTAKLSAYGTLKSAL 54 MAS +SS+G G+GL+++ ++ +L TAA+KA +T Q S+ TA +S G+L+SAL Sbjct: 1 MASTLVSSIGQGTGLNITEMVAALVNADTAAKKAQIT---RQTSNNTAMISGVGSLRSAL 57 Query: 55 TTFQTANTAL--SKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTR 111 T FQ A L S + F+A + S+ + TAGN A+AG Y I V LA + + Sbjct: 58 TAFQDAMAKLNSSTSPAFNAYAAKSANESVVKVTAGNTAVAGSYDIVVNKLATGSKVASA 117 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASII 169 A + LTI+Q G+ + ++ A SL +RD IN A G+SA+I+ Sbjct: 118 PIAG--GAAATVTGGTLTIEQNGNTYELEVEDGA---SLQSVRDQINKELAVQGISANIV 172 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 N +G RL +S TG D L VSG L+ S + G ++ AQ+A+LT+ Sbjct: 173 NGKDG-ARLVFSSTTTGADT--DLMVSGVPELEIDGTQQMSDTGAGF-ITAMAQDAELTI 228 Query: 230 NNVAIENSSNTISDALENITLNLNDVTT-----GNQT-LTITQDTSKAQTAIKDWVNAYN 283 + + + N NTI+DA+ ITL L V+ G T ++++QD + +++ +V+AYN Sbjct: 229 DGLVVTNKKNTITDAISGITLELTGVSARSGADGVPTNVSVSQDNDGLRKSVQSFVDAYN 288 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQ 343 +L T ++LT T + + S G L D T R++ ++ +LS + TL+Q Sbjct: 289 TLQKTITALTTSTR----DEDDNLSLGPLSNDPTTRSLVNDIRKVLSEVGAGDQLTTLSQ 344 Query: 344 IGITTDPSDGKLELDADKLTAAL--KKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 +GI T DG LE ++ K TAA+ KK S V L G G+ + + + ST Sbjct: 345 LGINT-TKDGTLEFNSTKFTAAMNDKKLGSEVQELFTG---SNGLIERMNKAIDPYNSTD 400 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G + + K L A R +A +++ +D + LN+ + + F Sbjct: 401 GSLATRKSNLDKVAKNLADQQTALDRRTEALTESLTKKWVAMDTAVAKLNAQADQIKSVF 460 Query: 462 E 462 + Sbjct: 461 D 461 >UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 Tax=Zymomonas mobilis RepID=C8WBS7_ZYMMN Length = 564 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 131/376 (34%), Positives = 209/376 (55%), Gaps = 27/376 (7%) Query: 8 GVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G GSGLD +++++ L AA Q + Q ++ + ++SA GT+ S L+ T+ ++L Sbjct: 39 GAGSGLDTTNLVNELVAASQDPIQQQLDTQSTTNSNRISALGTITSDLSALNTSLSSLVS 98 Query: 67 ADLFSATSTTSSTTAFSATTAGNA----IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + S T+ +AT + ++G +I V LAQAQ+++T T D +KT A Sbjct: 99 GGSLLTQPSVSDTSVLTATAESGSRLSNLSG--SIKVEQLAQAQSIST-TAYDSSKTFDA 155 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 LT ++ID A SSLS + AIN +AG +A+++ +G+ +L +T Sbjct: 156 ---GTLTFTNSYGSATVSID---AGSSLSDVAKAINKKQAGFTATVLTQSSGQQQLMITG 209 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 TG +A SVSG S + YD SA+S M V+VAAQ+A+L+ NNV + SSNT Sbjct: 210 M-TG--DAYGFSVSGSGG-ASDINYDKSANSGSMTVNVAAQDAKLSYNNVEVTRSSNTFD 265 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 D + +++NL ++ TL T+ TS + A+ ++V+AYN L +S ++ TA+ Sbjct: 266 DLISGVSINLKSASSQPVTLGSTRQTSNVRQAVLNFVDAYNEL---YSDISTNTAI---- 318 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS-SYKTLAQIGITTDPSDGKLELDADK 361 + SSS GAL D+ +RT+++ L SM++ +SS+ SY TL +IG++ + DG L D + Sbjct: 319 GTSSSSAGALANDAGVRTLKSSLNSMINQKLSSTGSYSTLGEIGVSIN-RDGTLTADTTQ 377 Query: 362 LTAALKKDASGVGALI 377 L AL D V AL Sbjct: 378 LDTALANDPDSVEALF 393 >UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VJE6_PSEU5 Length = 468 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 145/470 (30%), Positives = 242/470 (51%), Gaps = 33/470 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAK----LSAYGTLKSALTT 56 M+ I+ G+G+GLD+ ++ ++ A+KA P Q T K LSA GTL SA+ T Sbjct: 1 MSGITISGLGTGLDIGGMVTAIADAEKA---PKQAQIDRLTTKTETSLSAVGTLTSAVET 57 Query: 57 FQTANTAL-SKADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTR 114 F+ + TAL S + F SS ++ TAG A+ G Y + V LA + + + + Sbjct: 58 FEASLTALESSSSSFEGLGVQSSADGVASATAGAGAVPGSYEVEVISLASSSKVASASLE 117 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINV 171 T S LTI G D + + A +SL+ IRDAIN+ A AG+SA+II Sbjct: 118 GGASTTF-DSGGTLTIDVG-DNASYEVQV-APGASLTEIRDAINSQLSATAGISANIITD 174 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASA-----SSNGMEVSVAAQNA 225 +G RL ++S TG + + +GD AL + D + S G A NA Sbjct: 175 ASGA-RLVLSSEVTGEGTDLYVKGTGDLAALNINVDEDGNHDLTQQSGTGAGSITLASNA 233 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 ++ + + +S+NT++ AL +++ L G TLT+ +T +T+I+ +V+AYN+L Sbjct: 234 SYKIDGLELSSSTNTVT-ALSGLSIKLT--AEGTTTLTVAPNTEGLKTSIEAFVSAYNNL 290 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK-SMLSNTVSSSSYKTLAQI 344 I ++LT+ T + D S+ GAL+GD+ +R++ ++ ++ + S LAQ+ Sbjct: 291 ITVTNALTRVTTSE---DETSTDAGALVGDALVRSLLGSIRNELVQPSTGSGELSVLAQL 347 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 G+TT+ DG L +D KL++AL+ V A VGD G+ + S + + G++ Sbjct: 348 GVTTN-KDGTLSIDDAKLSSALETHYDEVQAFFVGD---DGLIPRLKSVTEPYTAPGGLL 403 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 T+ + KT+ +L++ A RID+ ++ +D+L+ L +TS Sbjct: 404 AGRTESLQKTMTQLSEQQQALDRRIDSLTTSLYTKYNNMDILVAQLQATS 453 >UniRef50_A6F9P0 Flagellar distal capping protein-like protein LafB n=1 Tax=Moritella sp. PE36 RepID=A6F9P0_9GAMM Length = 450 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 140/460 (30%), Positives = 233/460 (50%), Gaps = 49/460 (10%) Query: 13 LDLSSILDSLTAAQKATLTPISN-QQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D +S L AA +A L +N QQ++ K+ A+ L + TA LSK+ Sbjct: 3 IDPASFSSQLVAATRAGLDKHNNTQQATVNNKIRAFKALDGKVDNLSTALKDLSKSSDLR 62 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 AT T SS A+T AI G Y+I V+ LA+A + ++ + D LTI Sbjct: 63 ATDTKLSSEGIIKASTTDGAIVGDYSIEVSQLAKADRIGLTFADENWQPP---RDGSLTI 119 Query: 131 QQGGDKDP------ITIDIS--AANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + G D DP IT+D+S AN++L +R+AIN+A GV ASII G + +L + Sbjct: 120 KLGPDPDPTGSGKSITLDLSTLPANANLMDLRNAINSAADNPGVQASIIRTGT-DVKLVL 178 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S +TG + + +++SG + ++ D +A +N ++S A QNA+LT N +AI + SN Sbjct: 179 SSEETGTAHKLDITLSGGTS-GAYTELD-TALTNQTQLSTA-QNAKLTFNGIAITSQSNK 235 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + + +N+TL L G LT+ +D +++ V+AYN L+ + T + V+ Sbjct: 236 LENITDNLTLELTKTNVGEPLRLTVGRDDDAITKSLESLVSAYNGLMGRVKTAT-ISKVE 294 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 GA +++ + L GDST ++ QL+S+ SN + Y L Q+G+ D +G++ LD Sbjct: 295 TGA-TKNITRAPLSGDSTASSMMRQLRSVFSN-LPDGGY--LGQVGLKFD-KNGEISLDK 349 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 + L +L KD + +++G K GI + + L + + GI Sbjct: 350 EALAKSLDKDPDILNNMLLG---KDGIVDRLSTTLKPYSQSKGI---------------- 390 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 Y+ +++++ R +++ QLDV M SL YL Q Sbjct: 391 --YDNRVSSLNSEIDRLQDKTAQLDVQMESL--YQRYLKQ 426 >UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IM1_SACD2 Length = 692 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 117/406 (28%), Positives = 217/406 (53%), Gaps = 41/406 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFT-AKLSAYGTLKSALTTFQTANT 62 I S+G GSG+D ++++ LT+ +KA ++ T +K+S +G LKSAL+T + A Sbjct: 7 IQSIGAGSGIDTNNLVKQLTSIEKAAPQNRIDKTRDLTESKISDFGKLKSALSTLKDATK 66 Query: 63 ALSKAD-LFSATSTTSSTTAFSATTAGNAI-AGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ + LFS T++ + + A G + G YT V +A++Q+L++ + T T Sbjct: 67 TLTDPEGLFSKTASFTESDALVPVELGTDVQTGSYTFEVNAIAKSQSLSSTSFASITDTV 126 Query: 121 IATSDSKLTIQQGG----------------DKDPITIDISAANSSLSGIRDAINNAKAGV 164 + LTI+ G ++D I I I ++N+SLSG+RDAINN+ +G+ Sbjct: 127 ---GEGTLTIRLGAVTTDVNGEMTAFSADVEEDAIEIVIDSSNNSLSGLRDAINNSDSGI 183 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVS-------GDDA--LQSFMGYDASASSNG 215 A+I+N G+G Y+L + + +G N + ++V+ +DA L F ++ + S Sbjct: 184 QATIVNDGSG-YKLQIKAA-SGAANELEITVAESGGTPTNEDANGLSRF-AFNTTVSQ-- 238 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTA 274 + + Q+A LT+N +AI +N + D +E +TL++ G + +TI+ D + A+ Sbjct: 239 LTENQGGQDASLTLNGLAITRETNKVEDVVEGLTLDILKAAPGEEINITISDDKAFAEQN 298 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 I+D+V AYN ++ + + V+ ++ G+L DS ++I +Q++S +++++ Sbjct: 299 IRDFVEAYNLFLEVLEPIFGTSEVENDEGETTTVTGSLAKDSLAKSILSQIRSTIASSIP 358 Query: 335 ---SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 +S + +L +GI T+ DG L +D D ++A + V L Sbjct: 359 GLGNSDFTSLTNVGIRTE-LDGTLSIDEDDFSSAFDTNFEDVQKLF 403 >UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2J7_9BACL Length = 466 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 140/482 (29%), Positives = 236/482 (48%), Gaps = 50/482 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +S G+ SGLD S+++ L +K T + +++++ + + + + L T + A TA Sbjct: 3 VSLTGLASGLDTSTLITQLMNLEKVPYTNLESKKTAISNNKTIFNNINLKLKTLRDAATA 62 Query: 64 LSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQT-------LTTRTTRD 115 LS F+ +S TSS +T +AT NAI G Y++ V LA+ Q +T D Sbjct: 63 LSDLGAFNVSSATSSDSTKLTATGGENAINGSYSVKVIQLAKQQVNATAGMQVTDANGED 122 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITI---DISAANSS--LSGIRDAINNAKAGVSASIIN 170 T+ A +++K +I+ GG IT+ D + S LS I IN V AS++ Sbjct: 123 IEFTSAALAEAK-SIKIGG--QSITLNDDDFTGKTYSEALSLIASQINKQFGDVQASVVQ 179 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 G L +++ +TG T+ +SG + + M VAAQ A L VN Sbjct: 180 RSEGVKSLVISAKETG----KTVDISGTGSFK-------------MWEKVAAQPAILEVN 222 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDT 288 N+++ ++SNT+++A+ +TL L N T+ + QDT K + + D+V AYN ++ Sbjct: 223 NLSVTSTSNTVANAIPGVTLQL---LAENSTVNVEVKQDTDKLASKVDDFVKAYNDVVKL 279 Query: 289 FSSLTKYTAVDAGAD-SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS-SYKTLAQIGI 346 TK G+D S ++ L GDSTLR +Q++L ++++ V SS + K L+ IG+ Sbjct: 280 IRENTKKIENTKGSDGSYTNFKTNLQGDSTLRDLQSELYDIVNSVVGSSDNLKLLSDIGL 339 Query: 347 TTDPS-------DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 D G+L D DK L ++ V L G+ G+ T L W S Sbjct: 340 EIDKGVTSASLMTGELSFDKDKFKKKLAENPEAVAELFQGE---NGLGTLAKDRLYGWTS 396 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 T G+I G+ ++ +T + ++R+ + +QF+QL+V +++L + S+L Sbjct: 397 TNGLIAMRIQGLQSDIDFITDQMESMNERLKLKEEALNKQFSQLEVALSNLQNQQSWLAG 456 Query: 460 QF 461 Q Sbjct: 457 QL 458 >UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 Tax=Stenotrophomonas RepID=B4SIK7_STRM5 Length = 472 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 149/490 (30%), Positives = 239/490 (48%), Gaps = 52/490 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISN----QQSSFTAKLSAYGTLKSALTT 56 MA G+GSGL++S I++ L AA + P N QQS +LS+ GT+ SA Sbjct: 1 MADFGYGGIGSGLNISDIVNKLVAADR---KPADNALNLQQSKTKMQLSSVGTVTSAFDK 57 Query: 57 FQTANTALSKADLFSATSTTSSTTAFS----------------ATTAGNAIAGKYTISVT 100 +TA TAL F + T++ A T+ A G + I V Sbjct: 58 LKTALTALKATTAFDTRTVTATGKAGPNNADDVLTASVALYDLGTSKAAAANGTHKIDVK 117 Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA 160 +LA A L T+ T T A + + LT+ G + I++ A ++ L+ +R+ I+ A Sbjct: 118 NLASAHKLIADTSVPKTDTFGAGTLT-LTVGVGDKAKTMNIEVEAGDT-LTTVRNKIDAA 175 Query: 161 --KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDASASSNGME 217 K GV A++I+ G+ +Y LS+ TG +A+ L G D L + +G ++ Sbjct: 176 GRKEGVQATLISSGDNQY-LSIAQEKTGAASAIKLEYGGSDPKLGALVG--------SLK 226 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 + A +A LT++ V + ++SNT++DA+ +TLNL G T+ I+ DT+ A +++ Sbjct: 227 ENSPATDALLTIDGVEVVSASNTVTDAVPGLTLNLK--VKGLSTVVISTDTTAATKVMQE 284 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS 337 +V AYN+ I ++ TKY D+++ AL GD+ +R QL+S +S + + Sbjct: 285 FVTAYNAAIAAINTETKY-------DAKTKEASALTGDAQMRGALAQLRSTMSGVLLDLA 337 Query: 338 YKTL--AQIGITTD--P-SDGKLELDADKLTAALKKDASGVGALIVGD-GKKTGITTTIG 391 L +G+ T P +DG L LD K AAL + I GD G + T + Sbjct: 338 GDKLDAKALGLQTRGYPNADGTLVLDTTKFAAALAAQPEKIRQAITGDTGGAGRLYTMVD 397 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 +++ + G A T G++ TL+ + K R+ ARYK+QF LD LM L Sbjct: 398 GYVSTTVGKEGAFVARTKGLNSTLDNIDKRRKDLDARMVGVEARYKKQFVALDSLMGKLQ 457 Query: 452 STSSYLTQQF 461 +S+ L+QQ Sbjct: 458 QSSNTLSQQL 467 >UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alteromonadales RepID=Q15R99_PSEA6 Length = 486 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 135/491 (27%), Positives = 240/491 (48%), Gaps = 49/491 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTP----ISNQQSSFTAKLSAYGTLKSALTTF- 57 SI SLGVGSGLDL +++ L A++ TP + +Q+ S+ A++S+ GTLKS + F Sbjct: 2 SIQSLGVGSGLDLEALVSQLLEAER---TPKQARLDSQEESYDAEISSIGTLKSKMKEFL 58 Query: 58 QTANTALSKADLFSATST----TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT 113 + + S A+L T + + F+A + +A+ Y I+VT LA + T Sbjct: 59 DSVDELRSDANLKGREPTIKNPSENIEPFTAEASNSAVEADYAIAVTQLANGSRIETDNA 118 Query: 114 RD----DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSAS 167 D T +++ LT + G D +I+++A +L + AIN++ GV +S Sbjct: 119 VDGGFSSTSDSVSAQAGSLTFKIGATTDTFSINVTAG-MTLQQLSSAINSSDDNFGVRSS 177 Query: 168 IINVG--NGEYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDASASSNGMEVSVAAQN 224 II+ G +G +L TS+ G N + + + A L D++ ++ ++ +AQN Sbjct: 178 IIDTGTASGGAKLVFTSSVQGEGNDLMIVNDNNIADLNRVATTDSTETAAYLDPVKSAQN 237 Query: 225 AQLTVNNVAIENSSNTISDALENIT--------LNLNDVTTGNQTLTITQDTSKAQTAIK 276 ++ T++ +A+E+S+ + +EN++ L+ + +T L I D + I+ Sbjct: 238 SKATIDGIAVESSTTEFENVIENVSFTVSQLSELDEDGITPKTSNLKIGFDAEGLEGKIR 297 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 D+V+ +N+L ++LT+Y A D D GAL GDS +R IQ L +M+S VSSS Sbjct: 298 DFVDNFNALNTQITTLTRYGASDLEED------GALAGDSMIRGIQQGLSNMISANVSSS 351 Query: 337 SYKTLAQIGITTDPSDGKLELDA----------DKLTAALKKDASGVGALIVGDGKKTGI 386 TL Q+GI + DG LE+ + D+L AL+ + AL + G+ Sbjct: 352 GLGTLFQLGIEFN-EDGDLEIGSSDKFGFGSGEDRLKDALEDSFDDIAALFA--DSENGV 408 Query: 387 TTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVL 446 + + + + +G++ + V ++L + R+ + ++++ LD Sbjct: 409 AVRMHDYIEQYTNYSGLLTSREKSVQDQKDQLADEREQFELRMASTEQILRDKYLNLDQT 468 Query: 447 MTSLNSTSSYL 457 + LN T S L Sbjct: 469 VAQLNQTGSAL 479 >UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYH3_9GAMM Length = 543 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 127/377 (33%), Positives = 202/377 (53%), Gaps = 32/377 (8%) Query: 11 SGLDLSSILDSLT-AAQKATLTPISNQQS---SFTAKLSAYGTLKSALTTFQTANTALSK 66 SG+ SS + SL AA+ PI+ Q+ ++SAYG L S L Q+A L Sbjct: 4 SGVLSSSQIQSLVKAAENQYNAPIATLQAEAKPLETEISAYGNLSSVLGGLQSAVQGL-- 61 Query: 67 ADLFSAT---STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 DL S T + ++ SAT + A G Y+++V+ LA AQ+L + T +AI T Sbjct: 62 MDLSSLTQVQANVGNSAILSATASNAAPTGSYSVTVSGLATAQSLYSSDYSSQT-SAIGT 120 Query: 124 SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSN 183 L+IQ G + + ID++++N +L G+ +AIN + AGV+AS++ G G YRL+V N Sbjct: 121 G--TLSIQVG-NGAAVNIDVTSSNDTLDGLANAINQSGAGVTASVVYDGTG-YRLTVIGN 176 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISD 243 TG NA ++S +G + G+ ++ ++GM S AAQNA +VN +++ ++SNT S Sbjct: 177 QTGSGNAFSISTTGS----ALSGFSYASGASGMTESQAAQNATASVNGISLTSASNTFSG 232 Query: 244 ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT------A 297 A+ ++ ++ TG+ ++++ TS AQ+AI+D+V A+N S T YT A Sbjct: 233 AIPGVSFTVS--ATGSTSISVGVSTSDAQSAIQDFVQAFNKASSFIQSATAYTPASGTAA 290 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT-----LAQIGITTDPSD 352 V A S + G L+GD ++ I+ QL S++S + S IGIT S Sbjct: 291 VSATGTVASGTAGPLIGDPVVQGIENQLLSIISTATAIGSGGAADAIGFGNIGITLT-SS 349 Query: 353 GKLELDADKLTAALKKD 369 G + +D L +AL + Sbjct: 350 GTITVDQSALNSALSSN 366 >UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FN2_THICR Length = 781 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 27/350 (7%) Query: 41 TAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIA-GKYTISV 99 T +L A+ L++ L F + T LS LFS +T+SS + TA N+ A Y I Sbjct: 47 TTELDAFKYLQTNLEAFNSYVTDLSSPTLFSQKNTSSSNETLVSVTATNSAALASYQIES 106 Query: 100 THLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 LAQA T+ + T + S LTI GG IT+D A+N++L G++ INN Sbjct: 107 RQLAQAHTMVAN--KGFTSPSDTLSTGTLTIDVGGQVSNITVD--ASNNTLEGLQKVINN 162 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 GV+ASIIN G G Y++ TS ++G T+S D +D +NG + Sbjct: 163 GDYGVTASIINNG-GSYQMMFTSKESGAAGEATISGIAD--------FD----TNGFTTT 209 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDW 278 AQ+A + +N V + NS+NT ++ +T LN + G T+++ QD+ + I + Sbjct: 210 SQAQDAVMVLNGVTVTNSTNTFDQVIDGVTFQLNSASIGTTSTVSVGQDSQSVKDTITSF 269 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSN----GALLGDSTLRTIQTQLKSMLSNTVS 334 V+ YN L L KY D + +S G L G+S LR+++ Q++ +S +S Sbjct: 270 VDVYNQLDTILDELGKYDTSDLTEEELASEEYKYYGDLAGNSLLRSVKYQIRESMSGAIS 329 Query: 335 ---SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDG 381 SY++LA IGI DG LE+D+ KL AL D S + + G Sbjct: 330 QLAGGSYQSLADIGINF-TRDGALEVDSAKLDTALSTDMSALSTMFAKGG 378 >UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZP6_DESAC Length = 488 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 141/513 (27%), Positives = 248/513 (48%), Gaps = 86/513 (16%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ +GL+ I+ L ++A L + Q+ + +L+A+ L S L + A Sbjct: 1 MAGITFSGLATGLETDDIITELMTLERAPLDRLEAQKEAEATRLAAFKQLDSRLEDLRAA 60 Query: 61 NTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ +++ ++ + SS A +A++ G A +G Y I+V LAQ Q + DT Sbjct: 61 VGDLNITSEVRTSRISLSSEDALTASSNG-AASGSYDITVVQLAQMQKSVSVGVSSDTVA 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 + T T G TI + +N+SL G+ D+IN + K GV ASIIN G+G Sbjct: 120 GLGTG----TFTVAGK----TITVDESNNSLQGLADSINALSEKTGVEASIINDGSGA-- 169 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV------AAQNAQLTVNN 231 NA L ++G DA SF S G + +AQ A V+ Sbjct: 170 -----------NAYHLVLTGQDAQTSFTASSNLVDSEGAVLPFNLTETRSAQQAVAYVDG 218 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQT----------------------LTITQDTS 269 + + + +NT+S + +T++L+ V+ + + +T+ DT Sbjct: 219 IQVVSDTNTVSGVIPGVTMHLSSVSDTSYSGTYEAGVDPWEWADPPQYDSTLMTVEPDTE 278 Query: 270 KAQTAIKDWVNAYNSLIDTFSS-LTKYTA-------VDAGADSQSSSNGALLGDSTLRTI 321 + + +V++YN+++D S+ ++ A ++AGA+ S + GDST+ I Sbjct: 279 ALKEKVSTFVSSYNAVMDWISAGYDEFGAAAPSAEDIEAGAEDILSD--VVRGDSTVNGI 336 Query: 322 QTQLKSMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD 380 + QL+++LS+ + ++ S L+Q+GI+T DG + L+ AL+KD GV +L+ G+ Sbjct: 337 KRQLQNILSSQIDTTGSMSVLSQLGISTQ-RDGSINLNDSAFNEALEKDFDGVVSLLAGE 395 Query: 381 GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR----- 435 G+ + L L TG AT G+ + + Y++A R+D Q+AR Sbjct: 396 NDTEGVMKKFNTKL---LEMTG----ATSGM---YAEKQERYDSAIKRLDNQIARTEPLI 445 Query: 436 ------YKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + +F+ L++L++ +NS SS+LTQQ + Sbjct: 446 DKKEATLRAKFSALELLVSDMNSQSSFLTQQMD 478 >UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXZ9_COMTE Length = 470 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 134/478 (28%), Positives = 231/478 (48%), Gaps = 40/478 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 3 ISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQVDK 62 Query: 64 LSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L+K A T T+S++T + T +A+ Y + V+ +A QT+ + + T A Sbjct: 63 LAKPATWLGNTLTSSNSTQVTGTATSSAVQATYDVEVSQMAAGQTIGSGLVTNSTLGA-- 120 Query: 123 TSDSKLTIQQG-------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 KLTI G G + I+A ++SL+ I IN AK VSA+++ Sbjct: 121 ---GKLTISMGTFGTTGLTPNTKDGKDVSFEVTITAEDNSLAKIAAKINAAKGDVSATVL 177 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 GE RL + S TG+++A ++ G LQ F Y+ + S M SV A++ + Sbjct: 178 KDHTGE-RLVLQSKTTGVNSAFSVKAEG-AGLQQF-AYNGTDGS--MTRSVDAKDTLAKI 232 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLI 286 N + + + +N + +TL + + N +TI DT+ A+TA+K+ V +YN+L Sbjct: 233 NGIDMASHTNVFEEVAAGVTLTVAQKSAENTAPVRITIANDTATAKTALKNLVESYNALS 292 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS-NTVSSSSYKTLAQIG 345 +++T Y + + + G L GDST +Q+ ++ +LS + + +L+Q+G Sbjct: 293 SALATMTAY-------NKDTKAAGTLQGDSTAVNLQSAMRRLLSGHGGEGGEFTSLSQMG 345 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALI---VGDGKKTGITTTIGSNLTSWLSTTG 402 I DG L++D KL AL KD + V D + G + + L+T G Sbjct: 346 IAFQK-DGTLKIDDTKLDKAL-KDPESMSKFFTADVADASQDGFAVRLKDFTSGMLATGG 403 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + + L + T D S R+ A AR + Q+++LD M SL + +Y+ QQ Sbjct: 404 TFSTKDETLKNALKRNTADQERQSARVTAYEARLRAQYSRLDTQMASLKALDTYVAQQ 461 >UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVP3_9DELT Length = 465 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 124/479 (25%), Positives = 229/479 (47%), Gaps = 45/479 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + SIS+LGVGSGL+L SIL+ L +K L P+ + A+L A+ +++ L ++ Sbjct: 3 VGSISTLGVGSGLELQSILEDLRGIDEKQRLDPLKKNIDRYEAQLEAFTVVQNKLLDMRS 62 Query: 60 A--NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + L L SA S+ S+ + +AT A ++ V LA TL + D Sbjct: 63 HVRDLGLETTYLTSAASS-SNESVATATAAAGVAEQSLSMEVERLASRSTLLSEGVAD-- 119 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGN-- 173 + + + D+ + + GD D +T+++ ++L G+ INN A AGVSA II+ G+ Sbjct: 120 RGTVISDDASVFSYRVGDGDLVTVEVPEG-TTLEGLVQLINNDPANAGVSARIIDNGDMD 178 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV-----AAQNAQLT 228 ++L + +N+TG +N + + D +S M+ + AA NA Sbjct: 179 NPFQLILRANETGSNNFIQIEELPD-------------ASPAMDTRLEGEEPAALNASFI 225 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 ++ ++ NT+++ ++ +T L TG TL+++QDTS + + D V AYN ++ Sbjct: 226 LDGISYRRQGNTVANVIDGLTFELQ--QTGLTTLSVSQDTSNVRELVVDLVAAYNEVVQE 283 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIG 345 + +++ D ++ G +L +T+ ++ +L+++++ T S + + + +G Sbjct: 284 IAGKSRF-------DEETGKPG-VLARTTVSGLRHELQNLMTATYQGDESGAIRNMFDLG 335 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKK--TGITTTIGSNLTSWLSTTGI 403 + DG + L+ + L AL + V ++GD K+ G + L S S G Sbjct: 336 LEFQ-RDGSIVLNEEMLDEALAANPQAVRDFMLGDFKREAPGFADRLQDRLGSIASYGGQ 394 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 I + + L + +R+D + A QF +LD M+ + S YLT QF+ Sbjct: 395 ISTERNSAEDRIRDLETRIESERERLDRRYAVLTRQFIELDSYMSRMTQMSDYLTSQFD 453 >UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 Tax=Citrobacter RepID=D2TJ96_CITRO Length = 439 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 55/432 (12%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTAL-SKAD---LFSATSTTSSTTAFSATTAG 88 + QQS A+ + TL SAL FQTA AL S D FSAT+ S T T Sbjct: 23 LQKQQSELDAESNGLDTLSSALNDFQTAIDALNSDTDGPVTFSATANNDSATI---TANS 79 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS 148 A AG Y+ V LAQAQ +T DDT +A T +LT+ GD + ID++AA+ Sbjct: 80 QAQAGTYSFYVEQLAQAQQ-STFDLSDDTFSATGTF--ELTM---GDS-TMDIDLAAADQ 132 Query: 149 SLSG--------IRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 + G + AIN++ GVSA+++ +G + +TS TG +A ++S+SG Sbjct: 133 NGDGDGYIDASELVSAINHSDDNPGVSAALVKT-DGATTIMLTSETTGAQSAFSVSISGH 191 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV---AIENSSNTISDALENITLNLNDV 255 DA D SA++ + AAQ+A + + + AI NS+NT +D + +++ ++V Sbjct: 192 DA-----SGDTSATAPTLTEMTAAQDAIIHLGSATGPAITNSTNTFNDVIPGVSMTFSEV 246 Query: 256 TTGNQ---TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGAL 312 T N T T+ +D+S Q ++ +V+AYN+L+DT SLT +G+DS S+ G Sbjct: 247 TGENDDLTTFTVAEDSSGTQAKVQTFVDAYNTLVDTVDSLTS-----SGSDSTSA--GIF 299 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSSSYK--TLAQIGITTDPSDGKLELDADKLTAALKKDA 370 GDS L+++ +QL + + +SY ++ GIT D + G L++D+D A++++ Sbjct: 300 AGDSGLKSLTSQLDDL-----AHASYGGVSIVDYGITLD-AHGHLQIDSDAFNEAMEENP 353 Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRI 429 G+ A+ VGD + + + S+L S+ GI+ + +K+ + + ++ Sbjct: 354 EGLTAIFVGDDS---MVAQMDELMESYLDSSNGILTLRQQNIDDQQDKIQSEADRLTETY 410 Query: 430 DAQVARYKEQFT 441 + RY E++T Sbjct: 411 NNNYERYVEEYT 422 >UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN7_CHRVO Length = 458 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 130/419 (31%), Positives = 216/419 (51%), Gaps = 37/419 (8%) Query: 4 ISSLGVGSG-LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SS+ +G LD+ SI+ L A L + S++ ++LS G + SAL+ Q+A + Sbjct: 1 MSSISASAGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSAAS 60 Query: 63 ALSKADL---FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD---- 115 L FSATS+ S+ + S ++ G AG Y ++V+ LA+++ L + Sbjct: 61 TLQSGSFLQQFSATSSDSTVASVSTSSGG--AAGTYVLNVSQLAKSRQLVFDQNPNGSAI 118 Query: 116 -DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 D AI+ + S L+ GG + + +N+SLS I ++IN A GV+ASI+ N Sbjct: 119 TDQNAAISGAPSSLSFSVGGASSTVQL---GSNASLSSIANSINGAGIGVNASIVQY-NN 174 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDD----ALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 Y L ++S G NA +++ G D + + G SA++ S AQ+A +TVN Sbjct: 175 TYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATA--ASESANAQSALMTVN 232 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 V + + SN+++ + T+NL TG T+ + Q T+ ++ ++NAYN +I T + Sbjct: 233 GVNVSSDSNSVTSVVNGATINLEK--TGQVTINMAQSTTNITNTLQTFINAYNQVITTTA 290 Query: 291 SLTK-YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQIG 345 S T+ +T V + + +N + GD L ++Q + S+L V ++SSY LAQ+G Sbjct: 291 SATQSHTTVGS-----TPTNTDISGD--LTSLQEHMASILGTPVKGVDATSSYAYLAQVG 343 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 I T +DG L LD+ AAL + S V L G+ + TG+ + + S L G+I Sbjct: 344 I-TQKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINSLLGPNGLI 400 >UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCR5_LARHH Length = 423 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 122/465 (26%), Positives = 224/465 (48%), Gaps = 60/465 (12%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 ISS GVGSGLDL SI++ L A +K L + Q+ ++S G +K+AL+ + + A Sbjct: 3 ISSAGVGSGLDLESIINGLMAIEKRPLQKLEQQKKDLDTQVSDLGKIKNALSNLKEKSDA 62 Query: 64 LSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 ++K+D F+ +SS T T G+++AG Y ISV+++AQ +R D Sbjct: 63 ITKSDFFNTIKASSSDDTIGRVTVNGSSVAGTYNISVSNIAQ-----SRVDSLDVSVFSQ 117 Query: 123 TSDSKLTIQQ----GGDKDPITIDISAANSSLSGIRDAINNAKAG--VSASIINVGNGEY 176 +D KL + + G K IT+ ++ S+ + I NA+ G +SAS++ G+ Sbjct: 118 DADGKLLLPEEITVAGTK--ITLGVAPVAMSVEDLVGKI-NAETGSKLSASLVKSAGGD- 173 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA----AQNAQLTVNNV 232 ++ T+ +G + GY + + G+ V+V Q+A +T+N V Sbjct: 174 KIVFTAKHSG----------------AAPGYSDADFNFGVGVTVQNSQLGQDAVVTINGV 217 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 I +++N I DA+ I+L+++ G ++++ QD ++D+VNAYN ++ Sbjct: 218 EIRSATNKIEDAIPGISLSIS--KPGIFSVSVEQDNDAISKGVEDYVNAYNEVV------ 269 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 G +Q S+ G+ GD +R+I+ L + ++ LA +G+ +D Sbjct: 270 --------GLTAQMST-GSFKGDGLMRSIKNDLYLTMYQPSGATGLAPLASLGVEIG-TD 319 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 GKL+ K A K D V +V ++ + S + S LS G++ + + Sbjct: 320 GKLKFTKSKFEKAFKDDPDIVKQNLV------AVSKGMKSTVDSMLSGDGLVSGRQEVLD 373 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + ++ ++ + R++ A ++Q+T LDV + + + S L Sbjct: 374 GRIRNNSRQQDSMNTRLEKTEAALRKQYTALDVALAKMQQSLSRL 418 >UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadales RepID=B4RV22_ALTMD Length = 471 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 140/490 (28%), Positives = 246/490 (50%), Gaps = 57/490 (11%) Query: 1 MASISSLGVGSGLDLSSILDS-LTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+I++ GVGSGLDL +I+ + L A+ + L ++++S +L+ G +KS ++ Q Sbjct: 1 MATITNAGVGSGLDLEAIISATLQASNQPKLQKFASRESELEVQLTGIGGIKSVMSKLQD 60 Query: 60 ANTALSKADLFS---ATSTTSSTTA-----FSATTAGNAIAGKYTISVTHLA---QAQTL 108 L+ + F+ A+ S +A S ++ A G + I+V LA +AQT Sbjct: 61 VFEELASPEEFNQRVASVRQPSNSAELGDLVSVSSDKTATTGAFEINVLQLAKGSRAQTD 120 Query: 109 TTRTTR--DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVS 165 T + + TS LT G ++ IDI A S+L IR AIN ++ +G+S Sbjct: 121 ATNPANAFNSADEVVTTSAGILTFTAG--ENSFDIDIEAG-STLEDIRQAINSDSSSGIS 177 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA--AQ 223 A+IIN G + L + + +TG N + ++ + + L + G+E+ AQ Sbjct: 178 ANIINTGT-QTLLVIEAAETGSGNDLVIT-NNNAELDRLSTVANGGGAGGLEIGAEDQAQ 235 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNA 281 +A + V+ + I N+SN S+A++ +T+ + N+T + + D I ++++A Sbjct: 236 DAIIEVDGIQISNTSNVFSNAVQGLTITAERQSETNETANVNVAFDREGVTEKIDEFISA 295 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSS-NGALLGDSTLRTIQTQLKSMLSNTVSSSS-YK 339 +N+ ID QSS+ + L GD+T+R I+ QL + L+ TV ++ ++ Sbjct: 296 FNNTIDMIGQ-------------QSSAVSSPLFGDATVRAIKDQLTNALTTTVGNAGDFE 342 Query: 340 TLAQIGITTDPSDGKLELD--ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 T+ IG++ + +GKLE + L+ AL + S +G L G GI T GS L ++ Sbjct: 343 TIFDIGLSLN-ENGKLEKENVVRSLSEALDTNFSDIGKLFTNPG---GIADTFGSILENY 398 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQV------ARYKEQFTQLDVLMTSLN 451 + ++G++K D LN L KD + DR+D Q + ++++ LD L+ S+ Sbjct: 399 VDSSGVLKQRQD----ILN-LQKD-DLEDDRLDHQFRMEQLESSLRKKYASLDTLIASMR 452 Query: 452 STSSYLTQQF 461 S+ YL Q Sbjct: 453 SSGDYLMGQL 462 >UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 Length = 427 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 125/434 (28%), Positives = 212/434 (48%), Gaps = 45/434 (10%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA-DLFSATSTTSSTTAFSATTAGNAI 91 + Q + SA TL + L+TFQT L+KA +L + +T S + T+ G A Sbjct: 24 LKKQMDGIKGQQSALSTLNTKLSTFQTMLKDLNKASNLQAQKATMSQDGVMTVTSNGKAS 83 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDIS----AAN 147 +G+Y V LAQ+ + D++TA +D ++ G TIDI A Sbjct: 84 SGQYNFFVEQLAQSHQIGLSL---DSETAPLPADGVFSLTVKGK----TIDIDLATLPAG 136 Query: 148 SSLSGIRDAINNAK--AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM 205 S++ + IN+AK GV A+++ +G+ + +TS D+GL+NA+ ++ GD A S Sbjct: 137 STVKDLVSHINDAKDNPGVKATLVRT-DGKVNMVLTSKDSGLENAIVVNYRGD-ASNSL- 193 Query: 206 GYDASASSNGMEVSVAAQNAQLTV---NNVAIENSSNTISDALENITLNLNDV-TTGNQT 261 A+ +G AQ+A+L + N + I ++SN I + ++ +TL L G+ Sbjct: 194 ----GAAISGKTDITKAQDAKLRMGGDNPLTITSASNKIENVVDGLTLQLTKAQKNGDAP 249 Query: 262 L--TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 L I QD ++K +V++YN LID + +T S + GAL DS +R Sbjct: 250 LLVNIEQDKEAVTGSLKKFVDSYNELIDELAKMTS---------SDPKAPGALSSDSGVR 300 Query: 320 TIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV 378 + LKS+LSN+V + +L+ +GI TD + GKL AL+KD +G ++ Sbjct: 301 S----LKSVLSNSVRDLPNGLSLSSLGIKTDKA-GKLSFSETDFNKALEKDPELLGKALM 355 Query: 379 GDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKE 438 GD G+ + +L + G +K G+ + ++ + A R+D+ RY Sbjct: 356 GD---DGLLKRMSDSLDPYTKRDGALKGRKSGLEASEKRVNERMEALDRRMDSAYKRYLN 412 Query: 439 QFTQLDVLMTSLNS 452 QFT ++ ++ ++ S Sbjct: 413 QFTTMNQMLQTMGS 426 >UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (FliD-like) n=8 Tax=Enterobacteriaceae RepID=Q5DY02_ECOLX Length = 438 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 135/436 (30%), Positives = 222/436 (50%), Gaps = 64/436 (14%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTAL-SKAD---LFSATSTTSSTTAFSATTAG 88 + +Q+ A+ S +L SAL+ FQ+A AL S D F+ATS S AT + Sbjct: 23 LQEKQTELDAESSGLDSLSSALSDFQSAVDALNSDTDGPVTFAATSNNDS-----ATVSA 77 Query: 89 N--AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA 146 N A AG Y+ V LAQ Q TT + DD +A T +LT+ GD + ID+SAA Sbjct: 78 NSQAQAGSYSFFVEQLAQGQQ-TTFSMGDDAFSATGTF--ELTM---GDS-TMDIDLSAA 130 Query: 147 NSSLSG--------IRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS 196 + + G + +AIN++ GVSA+++ +G + +TS+ TG +A ++SV+ Sbjct: 131 DQNGDGDGFIDASELVNAINDSDDNPGVSAALVKT-DGTTTIMLTSDSTGAQSAFSVSVT 189 Query: 197 GDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV------AIENSSNTISDALENITL 250 G +DAS S V+ +AQ + ++ AI NSSNT D + +T+ Sbjct: 190 G---------HDASNDSTSAPVATVVSSAQDAIIHLGSATGPAITNSSNTFDDVIPGVTM 240 Query: 251 NLNDVTTGNQTLT---ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSS 307 +V+ + LT I++D+S +Q ++ +V+AYN+LIDT SLT + G DS S+ Sbjct: 241 TFTEVSDSDSDLTTFNISEDSSSSQEKVQTFVDAYNTLIDTVDSLTTH-----GDDSTSA 295 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK--TLAQIGITTDPSDGKLELDADKLTAA 365 G GD+ L ++ QL + ++ +SY ++ GIT D S G L++D+D+ Sbjct: 296 --GVFAGDAGLSSLANQL-----DDIAHASYNGVSIVDYGITLD-SHGHLQIDSDQFNDE 347 Query: 366 LKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAA 425 + K+ G+ ++ VGD + + T S+ GII + ++K+ + + Sbjct: 348 MAKNPDGLTSIFVGDNSMVAQMDDLINTYTD--SSNGIITLRQQNIDDQMSKIQDEGDQL 405 Query: 426 SDRIDAQVARYKEQFT 441 +D +A RY E++T Sbjct: 406 TDTYNANYDRYLEEYT 421 >UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRZ4_TERTT Length = 693 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 41/408 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D ++ LT ++A I +++ +++S +G L SAL T Q A Sbjct: 7 IQSLGAGSGIDTKNLTKQLTEIERAAPQNRIDSKRDKAESQISDFGLLSSALATLQDAAK 66 Query: 63 ALSKAD-LFSATSTTSSTTAFSATTAGNAI-AGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ D +FS T++ + +TA T + G Y +V +A +Q+LT+ + D T Sbjct: 67 VLTDPDGMFSKTASYTESTALVPTGLDTTVQPGSYNFTVEDIAASQSLTSLSFSDPTD-- 124 Query: 121 IATSDSKLTIQQGG-------------------DKDPITIDISAANSSLSGIRDAINNAK 161 A + LT + G D + + I I + N+SL G+RDAIN+A Sbjct: 125 -AVGEGVLTFRFGNVAVDGAGAMLGTNGFTPDLDTEEVQITIDSENNSLEGLRDAINDAD 183 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS--------GDDALQSFMGYDASASS 213 GV A+I+N G Y L +T+ ++G++N + +S + D+ S ++ +AS Sbjct: 184 FGVQATIVNDGLNGYVLQITA-ESGVNNQLEISAAESGGTPTDNDNTGLSRFTFNETASQ 242 Query: 214 NGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQ 272 + A +A LT+N + I SNTI D +E +++++ G++ T+T++ D + A+ Sbjct: 243 --LTQLQAGADAHLTLNGLNIYRESNTIDDIVEGLSMDVLQAAPGDKVTITVSDDKAFAE 300 Query: 273 TAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 I+ +V AYN +D T + G+L D+ +++ +Q+++ +++ Sbjct: 301 QNIRAFVEAYNLFLDAVKPAMGITDQENDEGESVKVTGSLANDALAKSMMSQIRTTIASA 360 Query: 333 VSS---SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 V +S+ +L IGI T+ DG + +D + + K+ V L Sbjct: 361 VPGIGDASFSSLGAIGIRTE-LDGTMSIDEETFGKTMDKNFEDVQKLF 407 >UniRef50_B0RKG7 Flagellar hook-associated protein 2 n=1 Tax=Herbaspirillum seropedicae RepID=B0RKG7_HERSE Length = 690 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 110/329 (33%), Positives = 176/329 (53%), Gaps = 26/329 (7%) Query: 147 NSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG 206 N L+ ++ AINNA AGV+ASI N G+ ++ L +T + A++L+ + D + G Sbjct: 370 NIDLTQVKLAINNANAGVTASITNDGSNDH-LVLTPTGSSATAAVSLTGTSD-----YAG 423 Query: 207 YDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTI 264 S GM + A+L+++ V + + +N + + + +TLNL+ VTT N TL I Sbjct: 424 LSMS----GMGQLSRRRTAKLSIDGVNVTSPTNKVENVISGVTLNLSKVTTSADNFTLNI 479 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 + DTS TA +V AYN+L + +T T + Q++++ L +S+++TI +Q Sbjct: 480 SNDTSGITTAANSFVTAYNTLAKAVAGMTAQTP--STTLGQANTSAPLASESSVQTIMSQ 537 Query: 325 LKSMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK- 382 L++ L +TV + TL+ IGI+ DG L LD+ KL+ A + +G+ L G Sbjct: 538 LRNTLFSTVDGGNGINTLSDIGISFQ-KDGTLALDSTKLSTAATNNFAGIANLFAGTDPD 596 Query: 383 -------KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN-AASDRIDAQVA 434 K GI T + + +TS LS GII T G+ +L K+ +D A R+ Sbjct: 597 PTNTTSSKNGIVTKLQTLMTSLLSDNGIIATKTSGLQASL-KINQDRQTAVQSRLSNLKD 655 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 Y QF QL++ ++S+ ST SYLTQQ N Sbjct: 656 AYTNQFNQLNLTLSSMQSTQSYLTQQLAN 684 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 118/209 (56%), Gaps = 27/209 (12%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 LD+++++ L +A+ ++ LTP++ Q SS+ +SAYG+LKSA++T+Q+A A++ A + Sbjct: 15 LDVATLVSQLISAESQSQLTPLTTQASSYNTLISAYGSLKSAMSTYQSAIKAMTSASFSA 74 Query: 72 ATSTTS--------STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 S+ S +T FSA G+ T + Q+ +++ TT + Sbjct: 75 QKSSVSNAGTGSNLTTDPFSADINGD----DSTKILAQKIQSAGISSGTTFN-------- 122 Query: 124 SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSN 183 + + I+ G + P+ + + ANS+L+G+RDAIN K G +ASI+ G G++ L + SN Sbjct: 123 AGDSIAIKIGTNS-PVFVTLQ-ANSTLAGVRDAINAGKTGATASIVTDGAGDH-LVLESN 179 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASAS 212 G N T+ V+ +++L F YD S+S Sbjct: 180 TGGTAN--TIKVTANNSLSGFF-YDPSSS 205 >UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n=1 Tax=Desulfotalea psychrophila RepID=Q6AMN7_DESPS Length = 485 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 140/505 (27%), Positives = 226/505 (44%), Gaps = 74/505 (14%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS G+ +GL ++ L A+ L + Q+++ L AY L + + Sbjct: 1 MGDISFGGLATGLPTEDLIAGLMKAESKPLDRLEKQKTNDATHLEAYEEYNDLLDELRES 60 Query: 61 NTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 +A+ +D+ + S+ SA+++G A G Y ++VT LAQ Q T ++ Sbjct: 61 VSAMHLTSDVRTTDVKLSNEDTLSASSSG-AATGSYNVAVTQLAQVQKNVTAGVSSQSEA 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGN--GE 175 S+ LTI + I ++L G+ +AIN+ K GV+ASIIN G Sbjct: 120 MF--SNGHLTI------NDTKIVFDGDKTNLDGMLEAINSVADKTGVTASIINDGKETDN 171 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 Y L D D ++S D ++ G ++ V AQ + V+ + I+ Sbjct: 172 YHLVFAGKDASTD----FTISTDLKVKGAEGETVDFANTRTSV---AQQSIAYVDGIEIQ 224 Query: 236 NSSNTISDALENITLNLNDVTT-------------GNQTLTITQDTSKAQTAIKDWVNAY 282 ++SNT+ + +TLNLN+V+ + +T ++ + I+ +V+AY Sbjct: 225 SNSNTLKGVVGGLTLNLNEVSKVISPADGDTPAVYATTVVELTANSDSLKEKIEGFVSAY 284 Query: 283 NSLIDTFSSLTKYTA-----VD-----------AGADSQSSSNGALLGDSTLRTIQTQLK 326 N +D S +Y A +D AG S+ SN L GD TL + +L+ Sbjct: 285 NKAMDWIVSGYEYKAENDKKIDASSSDAEKEAAAGQKSKKLSN-LLRGDPTLNKAKRELQ 343 Query: 327 SMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 S+L + +SS + L++IGI T DG L ++ KL AL ++ V L GD K G Sbjct: 344 SILGESADNSSKFNILSEIGIKT-QRDGTLLVNKTKLDKALDENYGDVVTLFAGDASKDG 402 Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVA----------- 434 + + S L S T + A G Y A RID Q+A Sbjct: 403 LMDKLNSKLLEQTSATRGVYAEKKG----------HYKATGKRIDKQIANQKTQLESIEK 452 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQ 459 RY+ QFT L++L++ +NS SSY++Q Sbjct: 453 RYRAQFTALELLVSKMNSQSSYISQ 477 >UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein, enables filament assembly n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5J6_PELCD Length = 442 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 134/476 (28%), Positives = 229/476 (48%), Gaps = 54/476 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++I+ G+ SG+D SI+D+L +K L + + + FT++ A+ TL++ L T Sbjct: 1 MSTINFGGLASGMDTGSIVDALMEIEKQPLERLESDKEYFTSRQDAFDTLETKLKTLLGK 60 Query: 61 NTAL-SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L S ++ + +++ S FS + +G+A+ G Y I V LA+ Q + D + Sbjct: 61 FEDLDSSGEVRAYSASAVSDEYFSVSASGSALGGSYNIEVQSLARQQ----KDVSDGSYE 116 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-----AGVSASIINVGNG 174 + + ++ G D ITID N SL + D IN A GV+ASII G+G Sbjct: 117 SRSEANFTTGTLTIGTTD-ITID----NDSLDSLVDKINAANTGDSATGVAASIIQDGSG 171 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 YR+ +T D + + SVSG GY A S + A + V+ V I Sbjct: 172 -YRMILTGEDAS--STFSASVSGGTTAN---GYAALTFS----TTQTQSQASIVVDGVTI 221 Query: 235 ENSSNTISDALENITLNLNDVTT--GNQT-LTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 SNT +A+ +++ LN V G+ T + +++D +T +KD V AYN++I+ S Sbjct: 222 TGGSNTFEEAIPGVSITLNKVHPNAGDTTVMNVSEDVDAVKTKVKDMVTAYNAVINYIS- 280 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YKTLAQIGITTDP 350 D + S G DS + ++ L+ ML++ +++ TL+Q+G+ T Sbjct: 281 -----------DQKDSDWGR---DSGMMAVKRNLQKMLTSQIATGGDLTTLSQLGLET-Q 325 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-----GIIK 405 DG + +D L A+ D + + L+ G GI+ S T +L +T G+ Sbjct: 326 RDGTITIDNTLLEEAITTDMNIMDKLLAGGEGFDGIS----SLFTEYLDSTTDRVDGLAA 381 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 +TL + + + R++ + + QF +++L+++LNST SYLTQQ Sbjct: 382 TRQTSTDRTLKTINANISKMETRLEKREEMLRAQFDAMELLISNLNSTGSYLTQQL 437 >UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 Tax=Comamonadaceae RepID=A1WR42_VEREI Length = 482 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 142/487 (29%), Positives = 241/487 (49%), Gaps = 42/487 (8%) Query: 1 MASISSLGVGS-GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+ISS G+GS GLD+ +I+ L A ++ L + Q ++ K+SA+G LKS + T Sbjct: 1 MATISSPGIGSSGLDVKNIISQLVALERKPLDALKQQATTVNTKISAFGQLKSLVATLDD 60 Query: 60 ANTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ +++ ST SS + + SAT G + ++ + V LA+AQ T T Sbjct: 61 STRALASVTGWNSVSTASSDSKYVSATAPGGTLPTRFDVEVQSLAKAQA-TASGTLLPVG 119 Query: 119 TAIATSDSKLTIQQ---------GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 A+ +L + Q P+ I ISA + L + IN A A VSA+++ Sbjct: 120 AALRAGTLRLELGQWSVAPHSFIPASGQPVDIRISAGDK-LVDVASKINGAGAAVSAAVL 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA---- 225 + +GE RL + S +TG LSV S A+A + +++S A ++ Sbjct: 179 SDPSGE-RLLLRSQNTGQAAGFRLSVL-PQGAASGGADGAAADTAALDLSSLATDSSTVT 236 Query: 226 ------QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 Q TVN +A+ ++SNT + + + VT +++++D S I D+V Sbjct: 237 QAAADAQATVNGIAVTSASNTFASTVSGVGFQALQVTQAPVEISVSKDDSATVARIGDFV 296 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-SNTVSSSSY 338 AYN++ D TKY D+++ + G L GD+T +Q L +L S + S ++ Sbjct: 297 KAYNAINDLLQDATKY-------DAKTRTAGLLQGDATALALQNSLLRVLRSVSTSGGAF 349 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI--VGDGKKTGITTTIGSNLTS 396 + LA +GIT G L +D +L AL + V L+ G G GI + + ++ Sbjct: 350 QRLADVGITQQ-LGGGLSVDTGRLNRALAERPGDVKNLLSSTGGGSANGIAVQMKALTSA 408 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKD---YNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 LS TG ++ D + ++L + ++D NAA+D + R +++ LD ++SLN Sbjct: 409 LLSGTGFFQSKYDTLQQSLARNSRDQAQVNAAADAFE---QRITQRYNALDTQLSSLNGL 465 Query: 454 SSYLTQQ 460 ++Y++QQ Sbjct: 466 NAYISQQ 472 >UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5Y9_9LACT Length = 496 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 150/507 (29%), Positives = 244/507 (48%), Gaps = 66/507 (13%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 SI+ LG SG+D S+ +D++ A+ + +N+QSS TA+ +A+ + + L + T Sbjct: 4 SINFLGSYSGID-SATIDAMIEAESGKVVQYTNKQSSITAEKNAWKDINTRLDSLFTKLG 62 Query: 63 ALSKADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + F + S TSS A TAG +++A Y+I V LA + +T+ I Sbjct: 63 TLGEDKTFKSKSATSSDATKVAITAGTDSLASDYSIEVNRLATSNKVTSGEIPLAEGATI 122 Query: 122 ATS---DSKLTIQQGGDKDPIT--------IDIS-AANSSLSGIRDAINNA--KAGVSAS 167 S T+ P+ DIS A SL I IN ++G+ A Sbjct: 123 KGSLKLSGTFTLTSQATSGPVEEKEASIGKFDISIEAKDSLKDIVGKINEKTKESGIQAK 182 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS--ASSNGMEVSVA---A 222 I++ R+ +T + G T++ G+ +S + D S A + G E A Sbjct: 183 IVD-----NRIIMTDSKMG---ERTMTFGGNLTDESGIAIDNSDMAKALGFEKDKAYEGG 234 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLT--ITQDTSKAQTAIKDWVN 280 Q+A+LTV+ + + +SNTI+DA+E +T++L VT ++ +T I +DT A + +V+ Sbjct: 235 QSAELTVDGIKVTRNSNTITDAVEGLTIDLKGVTEASKPVTIGIKEDTDTTVKAFQSFVD 294 Query: 281 AYNSLIDTFSSLTKYTAVDAGADS-QSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 YNS + TF +D G S + + GAL GDS+L +Q+ L+S+++ +VSS + Sbjct: 295 QYNSTL-TFVG----DQLDVGDPSAEKNKTGALAGDSSLIRLQSSLRSLMTQSVSSGNPA 349 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI-------------------V 378 YK L IGI+ D G LD KL AL D + V ++ V Sbjct: 350 YKNLEAIGISVDRF-GAATLDTAKLKTALADDPTAVKKMLFQTTTTETPGVDENGAPTTV 408 Query: 379 GDGKKTGITTTIGSNLTSWLS-TTGII--KAAT-DGVSKTLNKLTKDYNAASDRIDAQVA 434 K+ G+ + + + +++S TGII K+AT D +S+ + K +N +R+ + Sbjct: 409 KTEKEVGMAQKMRALVDTYISDKTGIIVTKSATYDKLSEDITKSIAKFN---ERLVKKRE 465 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 Y FT+LD M S +YL QF Sbjct: 466 NYVAMFTRLDTAMMQAESQMAYLQSQF 492 >UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8V2_9GAMM Length = 474 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 119/493 (24%), Positives = 227/493 (46%), Gaps = 58/493 (11%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQ-SSFTAKLSAYGTLKSALTTFQTAN 61 S+ +LG GSG+DL S++ L ++Q+ + Q+ S + +LSA G+ +S +F A Sbjct: 2 SVGALGTGSGMDLESLVSGLVSSQRDSKIAAYEQKISDLSVELSAVGSAESVAFSFHEAV 61 Query: 62 TALSKADLFSAT----STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT----TRTT 113 ++ LF++ + A + +G+A G+Y++ V +A + + Sbjct: 62 KKVNDPRLFNSRIADIEQPDTGDALAVEASGSARNGQYSLGVDQVASGSRMELLPNVFES 121 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINV 171 DD TA+ + +T G + I +D + LSGI I A+ G+SASII+ Sbjct: 122 PDDVLTALGGT---MTFAAGNESFTINLDGGTTLAELSGI---IAQAEKNFGISASIIDT 175 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG----YDASA-----------SSNGM 216 G G+ RL + S+ TG N + +SV+ + L MG YD ++ + N + Sbjct: 176 GEGDVRLIIESDKTGDGNDLNISVN-ERTLVDIMGTDTRYDFASLPQKYTDLLKSTKNNL 234 Query: 217 EV-------SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTS 269 + + AQN + V+ V IE +NT A++ + + + T G +I+ D+ Sbjct: 235 SMIPDNLISTQFAQNGIINVDGVEIEGDNNTFDKAVQGLEIEALNKTEGQVAASISTDSE 294 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 + +IK ++YN ++ TF+ LT+ G L G+S LR +++ L S L Sbjct: 295 TIKESIKTLTDSYNKMVSTFNDLTQM-------------GGTLQGNSLLRNLESSLVSTL 341 Query: 330 SNTVS-SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 T ++T+ +GI + S G +++D+ KL A+ + G+ G+ Sbjct: 342 GRTFEGGGEFRTMFDLGIEVERS-GLIKVDSYKLDNAISSGFKNFADMFTGE---RGVAK 397 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 + ++ +G+ ++ D + + + A R++ ++Q++ LD + Sbjct: 398 AFDELMQPYMGASGLFRSTEDSIQSQITSNDESREAFDLRMEQYEKTLRKQYSSLDSSIA 457 Query: 449 SLNSTSSYLTQQF 461 +N++ +YL Q Sbjct: 458 EMNASGAYLRSQL 470 >UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8AKF6_CITK8 Length = 442 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 131/453 (28%), Positives = 222/453 (49%), Gaps = 58/453 (12%) Query: 31 TPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL--SKADLFSATSTTSSTTAFSATTAG 88 T + +Q S+ A+ A +L++AL+ F++A T L S + T+T + + T + Sbjct: 23 TSLKSQTSTLEAQKKALSSLRTALSDFRSAITGLNSSSTSVLKNTATMNQEGIATITASA 82 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS 148 +A G Y+++VT LA AQ D+ AI + L I G+ I +D Sbjct: 83 SARKGTYSLNVTQLASAQQKGFDGLDDE---AIKNASGTLKINLNGESLEIEMDDL---D 136 Query: 149 SLSGIRDAINNA--------------KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLS 194 SL+ DAINNA + GV+AS++ + +G+ L ++S+ +G + L Sbjct: 137 SLADFADAINNADFPSASDTATSDDGQNGVTASLMRI-DGKVTLMMSSDQSGEKYDIQLD 195 Query: 195 VSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS--NTISDALENITLNL 252 SG Q NG V A ++A+ TV + + SS NT+ + ++ +++ L Sbjct: 196 TSGMTNGQDIF--------NGENVITAGKDAKFTVGDSSTVYSSSSNTLDNLVDGVSIKL 247 Query: 253 NDVTTGNQTLTITQDTSKAQTA--IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNG 310 T N+ L I+ DT T I+ +++AYN+L DT S LT S S S G Sbjct: 248 TGTTEANKPLVISVDTDATGTKEQIQAFIDAYNTLQDTISGLT-------ATGSSSDSRG 300 Query: 311 ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDA 370 A GD+++ ++ L ++L T + + + GIT D DGKL +DAD L LK + Sbjct: 301 AFAGDASISSLTNDLSNILRGTFGD---QNMTKFGITADK-DGKLSIDADTLNEQLKSNP 356 Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRI 429 V G+ G+ + +L +L+T TG++K G +TL++ +D + ++++ Sbjct: 357 QSVADFFNGN---NGLIKAMDKSLDKYLNTSTGLLK----GRQETLDRQQRDIDTKTEKM 409 Query: 430 DAQVA----RYKEQFTQLDVLMTSLNSTSSYLT 458 + + RY +QFTQL +MT +N+T S + Sbjct: 410 NTRYESSYNRYLKQFTQLQSIMTQMNNTMSMFS 442 >UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UUH2_XANC8 Length = 442 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 138/458 (30%), Positives = 225/458 (49%), Gaps = 41/458 (8%) Query: 11 SGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA-NTALSKAD 68 SGLD+ +++ +L + QK I+ ++ T +LSA +KS++TT ++A + +S AD Sbjct: 10 SGLDIPTVVSTLVSRQKDPEQARINKAGTAATTQLSAISQIKSSMTTLKSALDKVVSSAD 69 Query: 69 LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 + ++ + F+ATT +A G Y++ V LA AQ L + D T L Sbjct: 70 TNAYKASVPTDAGFTATTTSSAAPGNYSVEVVSLASAQKLASGAFTADATVGSGT----L 125 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNGEYRLSVTSNDTG 186 TI GDK IT+DIS + L+ I AIN A GV+AS++ +G++ L + DTG Sbjct: 126 TIGY-GDKS-ITVDISGTD-KLADIAAAINKAAGGKGVTASVVTANDGQH-LVFNAVDTG 181 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALE 246 A+T+S S D S + + A + G+ VAA +A + V+ +SSNT++D + Sbjct: 182 TKGALTVSAS--DPSLSALTFGAGV-TGGLTQQVAAADALVRVDGFERTSSSNTVTDIVP 238 Query: 247 NITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQ 305 + LNL G + TL +T DTS + + + AYN+ + + Y A + Sbjct: 239 GVVLNLTKAAEGTKVTLGVTADTSGLKGNLTAFAAAYNTANTLLKNSSSYNA-------E 291 Query: 306 SSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAA 365 + + AL GDS +R +Q QL+ +S ++S L +G+T D DG + D K A Sbjct: 292 TRTASALTGDSLVRGLQQQLRGQVSGSISE-----LKALGLTID-KDGVMSFDGGKFDTA 345 Query: 366 LKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV-SKTLNKLTKDYNA 424 + D + D K GS LT L + T + S +LNK K + A Sbjct: 346 IAADGGAAAEALGKDSK-------FGSGLTKLLDANVNVNNGTLTLRSDSLNKQIKGFEA 398 Query: 425 ASDRIDAQVA----RYKEQFTQLDVLMTSLNSTSSYLT 458 D +DA++ RY QFT ++ +++ + + L+ Sbjct: 399 DLDNLDARMEKLTDRYTAQFTAMETMISKMQGATGSLS 436 >UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221C0_RHOFD Length = 495 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 138/501 (27%), Positives = 243/501 (48%), Gaps = 56/501 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISS G+GSGLD++SI+ L A +K L ++ + ++ ++SA+G ++S Sbjct: 1 MATISSTGIGSGLDVNSIVSQLVALEKTPLKTLALKATNTQNQISAFGEIQSQFAALTDV 60 Query: 61 NTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +S A + A + +SS T+A + T G A A +++ V LA++Q+ ++ T Sbjct: 61 ASRISVASTWGARNASSSNTSAATITATGTANATSFSLDVDQLARSQSGSSAAVAPGTMP 120 Query: 120 AIATSDSKLTIQQG-----------GDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T LT+Q G G + + + A + ++S I IN A AGV A++ Sbjct: 121 GAGT----LTLQLGTWTAGGAAFTPGAAASVNVTVLATD-TISDIASKINGANAGVVATV 175 Query: 169 INVGNGE--------------YRLSVTSND-TGLDNAMTLSVSGDDA-LQSFMGYDASAS 212 N G E +R++V D T DNA +S D A + G + + Sbjct: 176 FNDGTNERLLLQSKTTGAAAGFRMTVADADTTNNDNAGLSRLSFDPATVDPLTGLASGMA 235 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT----------GNQTL 262 + G+ V AQ+A+ +N +A+ +++NT++D + +T+ L TT T+ Sbjct: 236 TAGIPVQY-AQDAKARINGLAVTSATNTLTDNIPGVTIKLVATTTTGYGLPGEVKSPLTM 294 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 I++D + A + D+V AYN L + + LTKY D+ + + G GDS++ +Q Sbjct: 295 AISEDVTPAVKNVSDFVTAYNKLNKSLTDLTKY-------DAATKTAGLFQGDSSVVGLQ 347 Query: 323 TQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 L++ML + +S + L+ +G+ DG L ++ KL+AA + + + L D K Sbjct: 348 NILRNMLGSASLGASSQRLSDVGLERQ-LDGSLVINTAKLSAA-ANNGTTLQQLFTNDNK 405 Query: 383 KT---GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 G S+ G +K + + K L+ TK+ +DR R ++Q Sbjct: 406 DPLTNGFALKFRDLGRGVASSGGSVKNKAEALQKNLDNNTKEQTKVNDRAALFETRLRKQ 465 Query: 440 FTQLDVLMTSLNSTSSYLTQQ 460 ++ LD M LN+ ++Y+TQQ Sbjct: 466 YSALDAQMAQLNALNAYVTQQ 486 >UniRef50_B7DR51 Flagellar hook-associated 2 domain protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DR51_9BACL Length = 509 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 122/365 (33%), Positives = 189/365 (51%), Gaps = 39/365 (10%) Query: 10 GSGLDLSSILDSL-TAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+GL +S + L T Q+ PI NQ SS +++ SA +L+SAL FQ A L+ Sbjct: 30 GTGLPVSQYVQDLQTILQQELEKPIQNQISSLSSQQSALTSLQSALQAFQQATETLASLQ 89 Query: 69 LFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS- 126 +S +SS ++ + TA A G Y ISVT LA AQT + + T +T S Sbjct: 90 SWSTVQASSSDSSVLSVTASAGASIGTYQISVTQLASAQTTFQNSALQTSATGASTLASG 149 Query: 127 -----KLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLS 179 T+ QG ++I+I N SL I +AIN ++ GV+A++++ G Y L+ Sbjct: 150 TLVITPKTLNQG---QSVSINI-VQNESLQSIANAINQYTSQTGVAAAVLSTGQ-SYFLA 204 Query: 180 VTSNDTGLDNAMTLSV----SGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++S TG T++ S DAL + AQ+AQ++V + Sbjct: 205 LSSVQTGAAYGFTVTETNVGSSGDALT-------------FQTDTQAQDAQISVGGQTLS 251 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 + +NT ++ + +TL +N +TG T+T++QDTS A A++ W++AYN+LIDT T Y Sbjct: 252 SPTNTFANYIPGLTLQVN--STGTATVTVSQDTSGALKAVQTWMSAYNTLIDTIRQDTAY 309 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDG 353 T GA + + G L GD + + ++ + +S+ VS +S Y +LA IGI DPS G Sbjct: 310 T---PGAGTSAGQAGPLFGDPLAQELLQEIPAAVSSVVSNATSPYNSLASIGIVLDPSTG 366 Query: 354 KLELD 358 LE Sbjct: 367 HLEFQ 371 >UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KR01_PSEPG Length = 463 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 132/484 (27%), Positives = 243/484 (50%), Gaps = 41/484 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GSG+D +I+DSL AAQKA I+ Q T LS+ G +++AL F+ Sbjct: 2 MAGTTVSGIGSGIDTQAIVDSLVAAQKAPKQAQINTQTLKATTTLSSIGKIQAALDAFRG 61 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIA-GKYTISVTHLAQAQTLTTRTTRDDTK 118 A T ++ + F S SS + T G A G + + V LA A ++T+ + Sbjct: 62 ALTNMTDTNSFGGLSLKSSDEKVATVTMGTGAANGSFKLIVDKLATASKVSTKVYANGAG 121 Query: 119 TAI--ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNG 174 + + ++ + LT+ Q G +++ A ++L +RD+IN+ AG+SA+++ NG Sbjct: 122 SVVNPGSTPTTLTMTQNGKAYDLSV---PAGATLQQVRDSINSQFGVAGLSANVLTDANG 178 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 RL VTS G + +TLS G+ + + G V +A+ T++ VA+ Sbjct: 179 S-RLVVTSTKMGEGSDITLS--GNSGIDT-----------GYTVVEEPADAEYTLDGVAM 224 Query: 235 ENSSNTISDALENITLNL-----NDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLI 286 ++ +N I+DA+ + + L + T+G +T L++T ++ ++ +K +++ YN+L+ Sbjct: 225 KSKTNDINDAVSGLNIKLVGTSPTNATSGEKTATILSLTTSSATLKSGLKGFIDTYNALL 284 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 ++ TK T G S + AL GD+T+RT+ T ++ L+ + + K+LA G+ Sbjct: 285 TVMNAETKVTKNADG----SMTAAALTGDATMRTLMTSIREELNAVSGNGTLKSLAAFGV 340 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIK 405 T+ G L LD K A +A+ + ++ G K G+ + + ++TG + Sbjct: 341 TSAQDGGALSLDDKKWEKAASTNAADLTSIFNG---KDGLLARLQKVTEPFAKASTGTLA 397 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE--N 463 + +S++L KL + + R++A ++++ +D L+T L S + N Sbjct: 398 ERSKVLSESLTKLKTEQDTLDARMEALKKSLQDKYNNMDTLVTQLRQQQSSVLSTLNALN 457 Query: 464 NSNS 467 SNS Sbjct: 458 KSNS 461 >UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17 Tax=Vibrionaceae RepID=FLIDL_VIBPA Length = 445 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 125/469 (26%), Positives = 233/469 (49%), Gaps = 51/469 (10%) Query: 15 LSSILDSLTAAQKATLT--PISN----QQSSFTAKLSAYGTLKSALTTFQTANTAL--SK 66 +SSI + AAQ A + P Q +++ ++LSA G ++SA+ F+TA + S Sbjct: 1 MSSIDPATFAAQFAQIEIQPFKQRYQLQTNTYQSQLSALGKVESAMREFRTALNEMNSST 60 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD-DTKTAIA-TS 124 + +++ S F+A A++G Y I V +A + ++T D D T I T Sbjct: 61 NSIIKNSTSISQEGYFTANADAKALSGSYQIFVEQVATSHQVSTGMPADLDATTEIPKTG 120 Query: 125 DSKLTIQQGGDKDPITIDISAANS------SLSGIRDAINNA--KAGVSASIINVGNGEY 176 + + TI + +TID+S ++ ++S + AINN GV+A+++ NG+ Sbjct: 121 NLEFTI----NGKTMTIDLSTVDTDGDGVTTVSDLTKAINNNSDNPGVNATLVR-SNGQT 175 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NV 232 ++S +TG+ N + +S +G + + A +N ++S A Q+A + + + Sbjct: 176 HFMLSSTETGVANQINVSATG-----TGQAWFEDAFTNLSQIS-APQDAVIWLGAEKTGL 229 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + NSSNT ++ + + + T +T L I D + + +V+AYN+LI Sbjct: 230 KLTNSSNTFEGVIDGVDITVTKAQTSGETAIGLGIGADDEATKEQLNKFVDAYNTLI--- 286 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 S++ ++T + S+ G L D T+R+I++QL S++ L++IG+T D Sbjct: 287 STIDEHTQIG----SEDKKRGVLASDPTMRSIESQLSSLVR---GEHGGMRLSEIGVTLD 339 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAAT 408 GKL++D +K A K +++G+ A+ GDG + ++ + +L ++G K+ Sbjct: 340 -RHGKLKVDQEKFAEAQKNNSAGLEAMFNGDG---ALLDSMDAMAEPFLKFSSGAFKSRK 395 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + + L++L+ + D RY +QFTQ++ LMT +N T S Sbjct: 396 EALQANLDRLSDKQTTLERKYDMSYKRYLKQFTQMNTLMTQMNQTMSMF 444 >UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Enterococcus RepID=C9A954_ENTCA Length = 473 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 150/498 (30%), Positives = 238/498 (47%), Gaps = 57/498 (11%) Query: 1 MASISS-------LGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSA 53 MAS++S LG SG+ S ++ L AA T N+ +S A+ +A+ + + Sbjct: 1 MASVTSSSGISTTLGSYSGV-TSEDIEKLLAADAINKTRAENKITSLKAQKTAWSDISTR 59 Query: 54 LTTFQTANTALSKADLF---SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 LT F + AL K D + AT+T SS + + TT A G Y + V LA A +T Sbjct: 60 LTNFLSKVDALQKDDAYQTKKATTTNSSIASIAGTT--EAPEGTYDLKVNQLATATKVTG 117 Query: 111 RTTRDDTKTAIATSDSKLTI---QQGGDKDPIT--IDISAANSSLSGIRDAINNAKAG-- 163 +KTA+ S +L++ + D PIT I+I+A +S L + IN+ Sbjct: 118 SQVAQSSKTALNVS-GQLSLTSSEVDEDGKPITASIEITAEDS-LKDVAAKINSQSKTTF 175 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 V+ASI+ + RL +T+ G N + + G+ A +G ++A++ Q Sbjct: 176 VAASIV-----DNRLILTNTKMGDKNFL---IDGNAA--EGLGIGSTATT------TQGQ 219 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 A ++ + I SN+++D ++ +TL L + + TL++ DTSK A++ V+ YN Sbjct: 220 PAIFELDGMKITRDSNSVTDVIDGVTLTLAKKSEEHVTLSLANDTSKVVDAVQGLVDQYN 279 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQ 343 SL+ S S+++ G L+GDS L +QTQL+++++ S S T + Sbjct: 280 SLM----SFIDDNLTVGDPSSENNKTGTLVGDSALTRLQTQLRNLITIPAVSGSKLTANK 335 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIV-------GDG----KKTGITTTIGS 392 +GI+T +DG L LD KL AL +D + V + DG K+TG T + Sbjct: 336 LGISTVDNDGTLGLDTTKLKEALAEDPAAVKSFFYASTKTKEADGTASTKETGYTLALKE 395 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ----FTQLDVLMT 448 S++ T K S T + KD N R D +A KE+ FT+LD +M Sbjct: 396 LANSYVVNTSANKGIIATKSATYDSTIKDLNKQITRFDDILAMKKERYITMFTKLDSVMM 455 Query: 449 SLNSTSSYLTQQFENNSN 466 + SYL+ QF N SN Sbjct: 456 EAENQLSYLSNQFANTSN 473 >UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED65_9LACO Length = 491 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 150/502 (29%), Positives = 238/502 (47%), Gaps = 80/502 (15%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 ++S S +G +G+ S +D L + + T I N+ K A+ + + L+ + Sbjct: 16 ISSSSYMGQYTGI-TSDTIDQLLQSDELRKTVIQNKIDKINTKSQAWTDISTRLSNLTSK 74 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAG--NAIAGKYTISVTHLAQAQTLTTRT-TRDDT 117 L + TSS AT +G +++ G Y + V LA A +T ++ D Sbjct: 75 LDVLQDEATYQTKKVTSSDDTI-ATISGTSDSMEGSYDLVVKQLATASKITGGVVSKADG 133 Query: 118 KTAIATSDS-----KLTIQQG---GDKDPITIDISA-ANSSLSGIRDAINNAK------- 161 T I+T D+ KLTI G G +T++I A SL I +AINNAK Sbjct: 134 TTKISTKDALGYSGKLTITNGATDGSDAALTVEIDVKATDSLKDIANAINNAKDPSDSTG 193 Query: 162 ---AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV 218 AG+ A+I+N +L V+S + G TL++ GD L+ +G+ S ++ G Sbjct: 194 TKGAGLKATIVN-----NQLVVSSEEMG---DRTLTIGGD--LKDSLGFANSQTTRG--- 240 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 QNA+ T++ + +E +SN+ +D ++ +TLN TL +T DT K +A+KD Sbjct: 241 ----QNAKFTLDGIEMERNSNSPTDVVDGVTLNFKKADASKTITLGLTNDTDKELSAVKD 296 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQS-SSNGALLGDSTLRTIQTQLKSML-----SN 331 +V+ YNS++ S +D G S+S ++ GAL GDSTL ++Q++L+S + N Sbjct: 297 FVSQYNSVMSFLSE-----KMDVGDPSKSDNTTGALAGDSTLISLQSKLQSTVLGGKSVN 351 Query: 332 TVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD--------GKK 383 VS+S+ +G++ D +G L LD K A L K+ + V D Sbjct: 352 GVSAST------LGLSVD-RNGTLSLDEAKFKAQLAKNPNAVKDFFFKDTSTKYATEKTG 404 Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGV----SKTLNKLTKDYNAASDRIDAQV----AR 435 TG T + L + ST K+ ++GV + KDYN +RI Q+ AR Sbjct: 405 TGYTADFKAVLDRYTST----KSGSEGVISLRKSSYQSEIKDYNKQIERITEQIATKRAR 460 Query: 436 YKEQFTQLDVLMTSLNSTSSYL 457 Y FT LD + +L S SY Sbjct: 461 YVTMFTNLDTAIGNLQSQFSYF 482 >UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A1RF91_SHESW Length = 448 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 55/442 (12%) Query: 43 KLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL 102 +L AY L++ + T + L S +T + A +AT +A G Y +SV L Sbjct: 36 QLDAYTLLENNMKKMATKLSELGGDAAKSKIATVTGENA-TATVKSDAPKGNYDLSVHKL 94 Query: 103 AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDK-DPITIDISAANS----SLSGIRDAI 157 AQA LT + ++ + + ++IQ G D + ID++ N S+S +RD I Sbjct: 95 AQAHQLTKAYS---SENELLPTSGVISIQVGSDPTKRMEIDLATVNGGAAISVSQLRDLI 151 Query: 158 NN--AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG 215 N GV AS++ GN + ++S ++G+ N M + +G D G Sbjct: 152 NKQAGNPGVQASLVRTGN-QIEFMLSSKESGVANQMKVEFNGADW--------------G 196 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQT 273 M AQ+A+LT+N + I +SSN + + ++ ++L L V ++ + +T D + Sbjct: 197 MTERRVAQDAELTLNGINITSSSNYLENVVDGVSLELVKVHAAGESSMIKVTDDFEANKK 256 Query: 274 AIKDWVNAYNSLIDTFSSLTKYTAV---DAGADSQSSSN----------GALLGDSTLRT 320 A+KD+V+++NSL+ + LT+ V D+G + + G L GD+++R Sbjct: 257 AVKDFVDSFNSLMTQINQLTRSMGVKTSDSGTSDKDKEDKTTAVSEAQIGVLKGDTSIRL 316 Query: 321 IQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD 380 +Q++L+ + T ++ L+ IGI DGKL++D KLT + K D V A+ G Sbjct: 317 LQSRLRDSVFATAANGM--RLSDIGIEIG-RDGKLKIDDAKLTDSFKSDPEKVQAMFTG- 372 Query: 381 GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR----Y 436 +I L + G I D + LNK K N + R D Q+ + Y Sbjct: 373 --PDSYVKSIEKTLKPFTQFNGYI----DQKQEALNKQIKSVNDSMARHDYQMNQKYQIY 426 Query: 437 KEQFTQLDVLMTSLNSTSSYLT 458 QFT ++ + NS S + Sbjct: 427 LAQFTAMESTINQFNSASQLFS 448 >UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herbaspirillum seropedicae RepID=B0RKG2_HERSE Length = 676 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 107/329 (32%), Positives = 173/329 (52%), Gaps = 25/329 (7%) Query: 137 DPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS 196 +P +D S A L+ + AIN+A GV+ASI N G+ ++ L +T + T +A+ L+ + Sbjct: 362 NPTDLDGSGA-IGLNDVMKAINDANTGVTASITNDGSKDH-LVLTPSGT---DAVKLTGA 416 Query: 197 GD--DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLND 254 GD D S MG A A Q+A+LTV+ V + ++SN +++ + +TLNL+ Sbjct: 417 GDYSDLAGSSMGQLAKA-----------QDAKLTVDGVTVTSTSNKVTNVISGVTLNLSK 465 Query: 255 VTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGAL 312 VTT N +L+I DTS TA +V AYN+L ++LTK T + Q+S+ L Sbjct: 466 VTTSADNFSLSINNDTSGLSTAANTFVTAYNTLAKAVANLTKQTP--STTKGQASTGSPL 523 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASG 372 +S++ + Q+++ + + + L+QIGI+ DG L LDA KLT A KD G Sbjct: 524 ASESSVLALMGQVRNTMLGALGDNGATNLSQIGISFQ-KDGTLALDATKLTNAANKDFDG 582 Query: 373 VGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQ 432 + L G+ + + L +G++ + T G+ +L +T AA+ R+ Sbjct: 583 ITQLFTS--ATNGVVPKLQKLMDGILGESGVLASKTKGLQDSLKIVTDQQTAANARLQDL 640 Query: 433 VARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 Y QF +L+V + ++ S SYLTQQ Sbjct: 641 KDTYTNQFNRLNVTLATMQSRQSYLTQQL 669 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 154/284 (54%), Gaps = 29/284 (10%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 LD++++++ L + + K+ LTP+ N++SSF +SAYG+LK+A T++Q+A L+ A FS Sbjct: 15 LDVATLVNQLISVESKSRLTPLKNKESSFNTLISAYGSLKNAFTSYQSALKTLTAAS-FS 73 Query: 72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ 131 A TT S +A T N +T T+ ++ + + + TA T ++ ++ Sbjct: 74 AQKTTLS----NAGTGTNLTTDPFTAD-TNTDESTKVLAQKLQSAGFTAGQTFNAGDSVA 128 Query: 132 -QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNA 190 + G P I + AN++L+G+RDAIN AKAGV+ASI G+G++ L + SN G N Sbjct: 129 IKVGTNQPTFITLQ-ANATLAGVRDAINAAKAGVTASITTDGSGDH-LVLESNTGGTAN- 185 Query: 191 MTLSVSGDDALQSFMGYDASASSNGMEVSV---------AAQNAQLTVNNV--AIENSSN 239 T+ ++ +++L S + YD S++ + + AA + VN + A++ SS Sbjct: 186 -TIKITANNSLSS-LAYDPSSNVSSTVTQIQAPRDASKAAAGKYNIAVNQLAQAVKVSSA 243 Query: 240 TISDA--LENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 I+ +N L + TGN + I Q + + ++D +NA Sbjct: 244 GIAPGSTFDNGVL---AIKTGNGSTAIIQPKTNSLAGVRDAINA 284 >UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=Pseudomonas syringae group RepID=Q48GD5_PSE14 Length = 492 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 147/489 (30%), Positives = 243/489 (49%), Gaps = 43/489 (8%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 S+ G+GSGL +++I++ L A+KA I Q ++ TA LS L SAL FQ Sbjct: 7 STTGLGSGLAITAIVEGLVGAEKAPKQNQIDKQTAATTASLSGVSQLTSALAAFQKTLDT 66 Query: 64 L--SKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L S F + TS+ A TAGN A+ G Y I +T LA + T +A Sbjct: 67 LGSSTTPAFQGFAATSANEAVVKATAGNTAVNGTYAIGITQLATPSKVATAALNSTQASA 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 I + K+T Q G + ID S+L +RD IN++ G++A+IIN NG RL Sbjct: 127 IPSGTLKIT--QNGTDYSVVID---KTSTLQEVRDKINSSLQGKGITANIINDDNGA-RL 180 Query: 179 SVTSNDTGLDNAMTL-SVSGDDALQ----SFM-----GYDAS--ASSNGMEVSVAAQNAQ 226 +S TG + +++ SG +AL M G DA+ A ++ A++A Sbjct: 181 VFSSTTTGKGSDISVVGASGQEALNIDGTKLMSDTSTGTDANGKAIPGAGAITATAKDAA 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQ----DTSKAQTAIKDWVNAY 282 TV+ +++ + +NT+S A+ +T +L T T T+T D KA +++ +V++Y Sbjct: 241 FTVDGLSLTSKTNTVSTAISGLTFDLVAPTAAGATTTVTVATNTDGLKA--SLQSFVDSY 298 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLA 342 N+L +SLTK + D G + + AL GD+T R + ++ L++ SS+ L+ Sbjct: 299 NTLATLVTSLTKGSISDKGVYTAA----ALTGDATPRALLATIRDQLASASSSAGLSALS 354 Query: 343 QIGITTDPSDGKLELDADKLTAAL--KKDASGVGALIVGDGKKT-------GITTTIGSN 393 Q+GI T S+G L LD TAAL KK S + + G G G+ + + Sbjct: 355 QLGIKTQQSNGTLSLDTATFTAALNDKKLGSQIQTMFTGTGATNADGTVDGGLVSRMTKA 414 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 L + + G++ + T ++K ++ D +A RI + A +++ +D+++ L +T Sbjct: 415 LLPYTKSDGVLASKTSSLNKIQTRIASDQDALDRRITSLTASLTKKYNAMDLVVGQLKAT 474 Query: 454 SSYLTQQFE 462 ++ +T FE Sbjct: 475 ATSITSIFE 483 >UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gammaproteobacteria RepID=Q2BI11_9GAMM Length = 695 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 51/401 (12%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D +S++ L +KA ++ +Q + A++SAYGTLKS+L+ FQ A Sbjct: 6 IRSLGAGSGIDTTSLVSQLVEIEKAPQEQRLNTRQETLEAQISAYGTLKSSLSEFQNAMA 65 Query: 63 ALSKADLFSATST--TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +L+ D F+A S ST + A G Y I V +AQAQ+L T + D K A Sbjct: 66 SLASNDTFNARSVAFPDSTVITPNSVDPGAQTGTYQIEVVDVAQAQSLATGSYAD--KDA 123 Query: 121 IATSDSKLTIQQG--------------------------GDKDPITIDISAANSSLSGIR 154 LT+ G ++ + I + A++ SL I Sbjct: 124 ALGETGTLTVSFGTWTYDEDAAPGADADAINEPYSFVSNDERAALNISVEASD-SLDDIA 182 Query: 155 DAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYD 208 D IN A A V AS++ V +G+Y+L +T+ +G +NA L +S DDA + S ++ Sbjct: 183 DKINAADADVQASVLLV-DGQYQLLLTA-PSGKNNA--LRISSDDATKGDATGLSVFEFN 238 Query: 209 ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQD 267 + S E ++A+L VN + + +N I+D ++ +LN GN T T++ D Sbjct: 239 ENEHSQVTETQ-QGKDAELKVNGLTVLRETNEINDVIQGFNFSLNKADPGNSLTFTVSAD 297 Query: 268 TSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 S AQ A +D V AYN T +L T+ D ++ + G L D T +T+ ++++ Sbjct: 298 KSGAQQAARDLVEAYNLFYQTSQNLVG-TSTD---ENNQTVKGDLSTDGTAKTLINRIRT 353 Query: 328 MLSNTVS--SSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 ++ V+ S + L IGI T+ DG L ++ D + A Sbjct: 354 AVTAEVTGLSGGFTALTNIGIRTE-LDGTLSINEDDFSNAF 393 >UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0V2_PSEFS Length = 467 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 130/475 (27%), Positives = 237/475 (49%), Gaps = 44/475 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GS +D +I+ SL A+K T I+ T LS+ G +++AL F+ Sbjct: 1 MAGSTVSGIGSNIDTQAIVKSLVDAEKVPKQTQINTASQKATTTLSSIGKIQAALDAFRG 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A ++ + F+ + +SS + TA N A G + + V+ LAQA L+T+ T Sbjct: 61 ALDNMTASSSFTGLTGSSSDEKVATMTASNTASNGSFRLIVSQLAQASKLSTKNFAGGTS 120 Query: 119 TAIATSDSK--LTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNG 174 T + +D LTI Q G + I A ++L +RD+IN +G+SA+I NG Sbjct: 121 TVVNATDKPTTLTISQSGKNYDVNI---PAGATLQQVRDSINTQFGTSGLSANIQTDSNG 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 RL +TS G + +TLS G+ L G V ++AQ +++ VA Sbjct: 178 S-RLILTSTTMGTGSDLTLS--GNSGLDV-----------GSTVVDHPKDAQYSIDGVAS 223 Query: 235 ENSSNTISDALENITLNLNDVT----------TGNQT---LTITQDTSKAQTAIKDWVNA 281 + +N I AL + + L V+ T +T +T++ + + ++ +K ++++ Sbjct: 224 VSKTNNIEGALSGVNIKLLSVSATKTVGDTSDTAERTATLITVSTNNTALKSGVKGFIDS 283 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+LI ++ TK T G S++ AL GDST+R++Q +++ + + ++K+L Sbjct: 284 YNALITAMNAETKITKNLDG----STTAAALTGDSTMRSLQASIRNEFNTISGTGTFKSL 339 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-ST 400 AQ G++T + G L +D K AA K +A+ + ++ G K G+ + S + ++ Sbjct: 340 AQFGVSTSSTTGLLTMDDKKWDAAAKTNAADINSMFTG---KNGMLARMKSATDDFAKAS 396 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 TG++ + +S +L L+K + ++R+D +++ +D L+ L S+ Sbjct: 397 TGVLATRSTSLSDSLKDLSKQQDTLNERMDLLTKSLSDKYNAMDTLVAQLRQQST 451 >UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGR3_CELJU Length = 684 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 112/372 (30%), Positives = 194/372 (52%), Gaps = 31/372 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS+LG GSG+D +++ + L KA T ++ +++ ++S YG L+S+L ++A Sbjct: 17 ISALGTGSGIDTNALTNQLVEINKAAQTQRLTTRKTLLETQISDYGLLRSSLAKLESAAA 76 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIA--GKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL +D F+A + + +T+ + T NA A G Y + V +AQAQ+L++ T Sbjct: 77 ALGSSDTFNAKAVSLPSTSLLSITKLNASANAGDYQLKVEQIAQAQSLSSGTF---ASMN 133 Query: 121 IATSDSKLTIQQGGDKDPIT------------IDISAANSSLSGIRDAINNAKAGVSASI 168 LTI+ G D +T I I +N+SL G+RDAIN A GVSASI Sbjct: 134 APIGKGTLTIRLGEWNDDLTSFGVDSTKTGAEIVIDDSNNSLMGLRDAINKAGIGVSASI 193 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 ++ G G Y+L +T+ +G N + +SV+ D + + S+ + +A++ Sbjct: 194 VSDG-GSYKLLLTAK-SGAKNEIEISVAEADGSSGLSSFSFNESTQNLTQQQGGLDAKIR 251 Query: 229 VNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 VN + + SN + D +E + +L + T T+ IT+D + A+TAI+D+V AYN+ Sbjct: 252 VNGLLVSRESNQVKDVVEGLEFDLFAASTTETITINITEDKTVAETAIRDFVTAYNTFKT 311 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIG 345 L G D++ G+L D + + ++++LS++V+ S + L+ +G Sbjct: 312 EVEKLV-------GFDAEKKDYGSLRTDPLAKNLVQGIRNILSSSVAGLSGGFTNLSYLG 364 Query: 346 ITTDPSDGKLEL 357 I T+ DG L++ Sbjct: 365 IRTE-LDGSLKI 375 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 43/73 (58%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + T+ + + +L ++G+IK D +++ + ++ KD A R +A AR QF ++ Sbjct: 598 GFSGTMSNLINDYLKSSGVIKEREDSINRDITRVGKDEEALERRSEAYRARLMSQFQAME 657 Query: 445 VLMTSLNSTSSYL 457 ++ SLNST S+L Sbjct: 658 AIVRSLNSTGSFL 670 >UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNP4_PSEMY Length = 431 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 121/438 (27%), Positives = 210/438 (47%), Gaps = 42/438 (9%) Query: 27 KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD--LFSATSTTSSTTAFSA 84 + L + Q+++ A+LSA TL +AL TF++A + L A + +++ S SA Sbjct: 21 QGQLAKANRNQAAYKAQLSALTTLDTALKTFKSAASGLKLAGSSMLVNSASFSQEGYASA 80 Query: 85 TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDIS 144 T A+AG Y V LA L + +D LTI QGGD ID+ Sbjct: 81 TVGSKAVAGSYDFFVQQLASKSQLALQGLQDGD-----LGSGTLTIGQGGD--SFEIDLG 133 Query: 145 AANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 A S+L + AIN A GV A+++ NG+ L +TS TG D A++LS G+ A Q Sbjct: 134 AV-STLDELAAAINGAGDNTGVKATLVR-SNGQVNLVLTSEKTGADQAISLSAGGNAAFQ 191 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDV-TTG 258 A + E+SV A++A + + + + ++SNT + ++ ++L + G Sbjct: 192 -------GAVAGRQELSV-ARDAIVRLGGETGIELSSTSNTFDNIIDGVSLTFSKAHKAG 243 Query: 259 NQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDS 316 + LTI QD + + +V+A+N+L+ +F SLT + +S G L GD+ Sbjct: 244 DTPLTIEIGQDQKATKEKAQTFVSAFNALMTSFDSLT-------ASGGESGGRGPLAGDA 296 Query: 317 TLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGAL 376 ++R I+T L ++ + +S L + GI + +GKL +D + A+ + G L Sbjct: 297 SVRAIETMLNQLVRTSFGGAS---LTEFGIVAN-RNGKLTIDNARFEKAVAANPEGFEKL 352 Query: 377 IVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 G + T+ NL + S+ G++ D ++ L ++ + ++ + D+ +R Sbjct: 353 FTDKGN---LLDTLDKNLAVYTSSAGGLLTNRKDTLNTQLRRVDQQFDNIQKQYDSYYSR 409 Query: 436 YKEQFTQLDVLMTSLNST 453 Y Q+T L M ++ T Sbjct: 410 YLRQYTGLMQTMAAMEQT 427 >UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 Tax=cellular organisms RepID=A1TVF1_ACIAC Length = 478 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 135/473 (28%), Positives = 232/473 (49%), Gaps = 53/473 (11%) Query: 20 DSLTAAQKATLTPISN-----QQSSFT-AKLSAYGTLKSALTTFQTANTALSKADLFSAT 73 D + A+ A PI+ QQ++ T +K+SA+G LKS ++T A L+ ++ Sbjct: 19 DLIKASVDAVKLPITRTNGLSQQAAVTNSKVSAFGQLKSLVSTLSDAANKLTSVTGWNGV 78 Query: 74 STTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT--------- 123 + TSS+T F +A G A A + + V +LA+AQ+ + + K+A+ Sbjct: 79 AATSSSTDFVTVSAVGGAAATSFNVQVQNLAKAQS-SISDSLTPAKSAVGAGTLTLTTGT 137 Query: 124 -SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 S S + G D + + ID+ AA +L + IN +KAGV+A+++ +G+ RL + S Sbjct: 138 WSGSPKSFAAGAD-EGVKIDV-AATDTLEDVASKINGSKAGVTATVLTDASGQ-RLMLRS 194 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA-AQNAQLTVNNVAIENSSNTI 241 TG LSVS D S DA+ S + S AQNA TVN VA+ + +N Sbjct: 195 KTTGESAGYQLSVSDADGNNS----DAAGLSRLLSGSTEYAQNANATVNGVAVTSGTNVF 250 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 ++ + +T TT + ++T+T+D S + I+ +V AYN++ + TKY Sbjct: 251 ANTVAGVTFTAVKPTTTDVSITVTKDNSAVKANIQAFVTAYNAVNSALNESTKY------ 304 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITT-------DPSDGK 354 D + + G L GDS T+Q L+ L + S + ++L+++G+ + P DG Sbjct: 305 -DKDTKTAGLLQGDSGAVTLQNTLRMALQSVNQSGALRSLSEVGVVSAGGSGNLSP-DGS 362 Query: 355 LELDADKLTAALKKDASGVGALIVG-DGKKT--GITTTIGSNLTSWLSTTGIIKAATDGV 411 L LDA K A+ ++ V A G DG G + + L++ G G Sbjct: 363 LTLDATKFDKAM-QNPDDVKAFFRGADGGSVTDGFAGKFKAVTSRLLASDGFFA----GK 417 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKE----QFTQLDVLMTSLNSTSSYLTQQ 460 ++ ++ K A +RI+ + + ++ ++T LD M+++N+ +SY+ QQ Sbjct: 418 DQSYKEMLKRNAADIERINERASEVEKNLTARYTALDTKMSNMNALNSYIQQQ 470 >UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagellar hook-associated 2-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS91_9DELT Length = 572 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 102/372 (27%), Positives = 172/372 (46%), Gaps = 28/372 (7%) Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINN 159 HL + T+D+T+ A+ K I GG + TID+ +L + + IN+ Sbjct: 209 HLKLDANVRLAITKDETEIGFASPGFKYEIGSGGALN--TIDVPLEEGLTLEQLVERINS 266 Query: 160 A-KAGVSASIINVGN--GEYRLSVTSNDTGLDNAMTLSVSGDDALQSF-MGYDASASSNG 215 GV+ASI++ G+ YR+ + +NDTG +N + + + D LQ M A +G Sbjct: 267 EDNPGVTASIVDTGDPVAPYRMVMRANDTGENNRIRILNNPD--LQGLTMNEQQGADDDG 324 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 +VS+ NA+L V+ + + NTISD ITLNL G TL ++ T + + Sbjct: 325 NKVSL---NAKLRVDGITYQRQDNTISDIFPGITLNLQ--GEGTSTLNVSGRTEDVREMV 379 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS- 334 + V YN LI +Y D +S GAL ++ + ++ QL+ ++++ Sbjct: 380 VEMVELYNELIQEVGDKVRY-------DEESGQPGAL-ARTSAQGLRHQLEGIMTSRFEG 431 Query: 335 --SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT--GITTTI 390 S +++ +G+ DG + LD L L +D+ V A + GD ++ G + Sbjct: 432 DESGQVRSMFDLGMEFQ-RDGSITLDTQVLDRQLAEDSDAVRAFLQGDAQREQQGFADNL 490 Query: 391 GSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 L S S G++++ + + L + + + R+D + A QF QLD M + Sbjct: 491 QDRLGSIASMGGVMESEKNNAQDRIRDLERRIESETMRLDRRYAAMTRQFIQLDSYMQRM 550 Query: 451 NSTSSYLTQQFE 462 S YL QFE Sbjct: 551 QSMGDYLEGQFE 562 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + S+S+LG+GSGL+L I+D L ++ + P+ N + +L A+ +++ L + Sbjct: 3 VGSMSALGLGSGLELQGIVDDLRKVDEQQRIDPLKNNITRLEDRLEAFNGVQNKLLEMRA 62 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIA 92 LS + +SS TAG+ A Sbjct: 63 HARELSLESTYLRRDVSSSNENVFTVTAGDGAA 95 >UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRA7_CHRVO Length = 456 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 137/475 (28%), Positives = 234/475 (49%), Gaps = 44/475 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S VG+ LD+ I+ L A ++ L + + +LS G L S+L+ QTA Sbjct: 1 MAAITS-SVGA-LDVQGIVSQLMAIERRPLNESQQRADQYNTQLSTVGKLSSSLSALQTA 58 Query: 61 NTALSKA---DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT----RTT 113 T LS +F AT + +S A S T+ +G Y I V +LA ++ L +T Sbjct: 59 LTGLSSGRFLQVFKATVSDASMGAVSTTSG--GSSGTYQIDVKNLATSRQLVFDQVGTST 116 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSASIINVG 172 D K AI+ + ++ Q G +T+ + SL I D IN A G++AS++ G Sbjct: 117 ITDPKAAISGAPDSISFQVNGKTQTVTLRSKPDDVVSLQTINDKINAAGIGINASVVQNG 176 Query: 173 NGEYRLSVTSNDTGLDNAMTL------SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 + +Y+L + S ++GLDN + S SG + + G S ++ G E S A NA Sbjct: 177 S-QYKLVLGSVESGLDNQFKIVAGSNSSDSGGTSGSTLAGLSQSPTA-GTE-SRDASNAS 233 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LTVN VAI SN ++ A+ + ++L G+ T++++ D++ ++ +V+AYN +I Sbjct: 234 LTVNGVAISAGSNKVTSAVAGVEIDL--YKAGSFTVSLSPDSAGVAKNLQSFVDAYNQVI 291 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLA 342 D +++ +GAL G++++ IQ +L+ +L+ V+ +S L+ Sbjct: 292 ---------------GDVKAARSGALKGNASILDIQGKLQQVLATPVAGVDPVNSIAYLS 336 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 Q GI+ DG L+LD A+KKD V L G+ TG + L G Sbjct: 337 QAGISLQ-KDGTLKLDQTAFNDAMKKDKQAVVNLF-GNASNTGFAQRFNLEINGMLDPKG 394 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 +I+ + + ++ T+ ++ R+D + A+ Q+T L+ + + S SS L Sbjct: 395 VIETSKATIRTKVSTETQLQSSLQSRLDTKQAQLIRQYTALNKTLAEMQSGSSSL 449 >UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina RepID=Q5QZT2_IDILO Length = 463 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 124/483 (25%), Positives = 230/483 (47%), Gaps = 49/483 (10%) Query: 1 MASISSLGVGSGLDLSSILDS-LTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M +SSLG SGLDL I+ + L A + + Q+ +LSA G +KS L+ Q Sbjct: 1 MPLVSSLGARSGLDLEGIVSATLNAERVPKQNRLDQQEGRLQVELSAVGEMKSVLSKLQE 60 Query: 60 ANTALSKADLFSATSTT----SSTTAFSATTAGNAIAGKYTISVTHLAQA-QTLTTRTTR 114 A LS +LFSA + S + + +A G + ISVT LA+ + ++ Sbjct: 61 AAEKLSSGELFSAMKASVKQPESGDVITVESTEDAGVGNFDISVTQLAKGSRAVSADGAF 120 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVG 172 +++ + T+ LT G + T++I A SSL IR A+N+++ GV+A IIN G Sbjct: 121 ANSEDEVNTNAGSLTF--GAGDESFTLNIEAG-SSLEDIRKAVNSSQDNFGVTADIINTG 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA------SASSNGMEVSVA--AQN 224 E +L SN +G N +T V+ D+A +DA + GM ++ A A + Sbjct: 178 T-EAKLIFRSNVSGEGNDLT--VTNDNAE-----FDAISTQANGGGAGGMSIAAADKATD 229 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAY 282 A + ++ + +N +N D ++ T+ + +T L+I +D + +I +V AY Sbjct: 230 AIIEIDGIQAKNDTNIFEDVIQGSTITAVKESEDAETAKLSIARDEDGVKKSIDAFVKAY 289 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLA 342 N + + + + N L GD+T+R ++ QL ++L++T +TL Sbjct: 290 NGAVASLNEI-------------GGENSMLQGDATVRNLKGQLNNVLTSTFGEGG-QTLF 335 Query: 343 QIGITTDPSDGKLELD--ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST 400 +G D +GKLE + + LK + + + ++ G + G+ + + S L ++ Sbjct: 336 DLGFGLD-KEGKLEAENPVTSFSEVLKNNPAALESVF---GGENGLASRMDSFLDGYVGG 391 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 G ++ D ++++L+++ + R+++ + ++ LD L+ L S + ++ Q Sbjct: 392 GGSLELRKDTINQSLDRVAESREDLKLRMESMEETLRAKYQALDSLVGQLQSRGNAVSAQ 451 Query: 461 FEN 463 N Sbjct: 452 LSN 454 >UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanthomonas albilineans RepID=D2UAA1_XANAL Length = 454 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 134/463 (28%), Positives = 232/463 (50%), Gaps = 38/463 (8%) Query: 13 LDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLF 70 LD+ + + +L A ++A I+ ++ TA+LSA GT+K A++ QTA +LS AD Sbjct: 15 LDIPTFVANLVAQERAPQQDRINKDGTASTAQLSALGTIKGAMSNLQTAIKSLSTSADTG 74 Query: 71 SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 + +T + ++A+ NA AG Y + V LAQAQ LT+ + + LTI Sbjct: 75 AFNATVADGAGYTASVTSNATAGNYNVEVVSLAQAQKLTSAA----YASTATVGNGTLTI 130 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNGEYRLSVTSNDTGLD 188 G + +TI S+L+ I AIN A GVSAS++N +G + L + + TG Sbjct: 131 AYGTNSLNVTI---VPGSTLNDIAAAINKAAGGKGVSASVVNADDGNH-LVLNAVSTGTA 186 Query: 189 NAMTLSVSGDDALQSFMGYD--------ASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 A+T+ SG D + + Y +S+S++GM + AA +A + V+ +SSN+ Sbjct: 187 GALTVKASGGDGGLAALTYPSSSSSSSSSSSSASGMTQNTAATDAVVRVDGFTRTSSSNS 246 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 I+D + LNL G+ L I D S + + V+AYN+ +S + Y A Sbjct: 247 IADLAPGVVLNLTKAIPGSTFKLNIANDNSALKGNLTALVSAYNATNTVLNSSSDYNAT- 305 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 +++SS L GD+ +R +Q L+ +S+ +++ L +G+T D DG + D+ Sbjct: 306 ----TKTSS--PLTGDAMVRGLQQSLRKQVSDNITA-----LGALGVTID-KDGVMSFDS 353 Query: 360 DKLTAALKKDASGVGALIVGDGKKT-GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKL 418 K +A+ +++ ++ +G T G+ T + NL T G + T+ ++K ++ L Sbjct: 354 GKFDSAMASNSASAKSMFGANGSFTSGMNTLLNGNLD---GTNGTLTQRTNALNKHISDL 410 Query: 419 TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 T + R+ +Y +F+ ++ L+ + S S L QQF Sbjct: 411 TDQLSDLDKRMSTLSDQYTARFSAMNTLVAQMQSIQSSLAQQF 453 >UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMG3_ACIBL Length = 446 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 139/478 (29%), Positives = 228/478 (47%), Gaps = 62/478 (12%) Query: 5 SSLGVGSGLDLSSILDSLTAAQ-------KATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 +SL G G D+ S+++ + AQ K+ T + NQ S+ TA ++S + TF Sbjct: 8 TSLYSGKGFDVQSMVNQILNAQRTQEDQWKSQQTLVQNQTSALTA-------IQSEIGTF 60 Query: 58 QTANTALSKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 TA+T L+ + L + +++S T A AT A GK+ ++V LA TT Sbjct: 61 YTASTNLTDFNGVLGAKIASSSDTGALVATADSYATTGKHVLAVEQLA--------TTGS 112 Query: 116 DTKTAIATSDS------KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 TAIA+ DS LT+ T+ + NS+LS + DAIN GV+A++ Sbjct: 113 AYSTAIASGDSLDSGCFDLTV----GSTTKTVTLGDDNSTLSDVADAINKLGMGVTAAVQ 168 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 G RL++ SN +G +A LS+SG + SF QNA + V Sbjct: 169 TDAAGS-RLTIVSNTSG--SAGALSISGGTSQLSFN-------------VTKGQNAIVDV 212 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDT 288 + V E++SNT+ A+ +TLNL Q TL+++QD ++ AI DWV++YN+L+ + Sbjct: 213 DGVPYESASNTVDGAISGVTLNLATANPDKQVTLSVSQDATQVAQAIGDWVDSYNALVKS 272 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSSSYKTLAQIGIT 347 ++ Y +S ++ GAL GDS+LR +Q L + ++ + Y TL IGI Sbjct: 273 VNTQFSY-------NSTTNRAGALSGDSSLRLLQDSLLHLAPFSMDGNGDYGTLRSIGID 325 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 + DG L +D+ L AL S + + G+ ++ L S T G I Sbjct: 326 ME-DDGTLSVDSTTLNDALANHFSNLTSFFQGENSFGTTLSSAAQMLES--PTVGPISLD 382 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + +T LT + + R+ +Q Q++Q++ + L S + ++Q ++ S Sbjct: 383 LQTLRQTNQDLTNEISDFETRLASQQQTLLLQYSQINAALQELPSLQNQISQMLDSTS 440 >UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3D8_WIGBR Length = 505 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 120/518 (23%), Positives = 208/518 (40%), Gaps = 65/518 (12%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS LG+ S + ++ + + + I ++ + K+S++G + L Sbjct: 1 MNEISMLGISSQGATAELIKKIEEIETHKINNIKLKEDKISYKISSWGKINFLLQNLSDK 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD----- 115 L + FS + S F A + N G + I V LA+ L+ + Sbjct: 61 LNNLGEKS-FSFLKS-SDNECFKAVS--NDFYGSHKIKVIQLAKKHVLSLSVPKSMNEIL 116 Query: 116 DTKTAIATSDSKLTIQQGGDKDP-----ITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 K I + I G + P I I + SSL GI AIN + A + A I Sbjct: 117 GNKEPIRY----INIIHGKEIKPGLKNNTVIKIKRSESSLRGIEKAINQSGAKIKAEIKK 172 Query: 171 VG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--------------- 214 +G + RL +TSN G + + + V GD+ L + + + + N Sbjct: 173 IGLKNKNRLILTSNILGEEGKINIHVEGDEKLNRMLCFPYNENVNEKSKLEYKKENKNFN 232 Query: 215 --GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLN--------DVTTGNQTLTI 264 +E + N+ + V+N +N I D L+N+TLNL ++ G +TL+ Sbjct: 233 EPKLEEIQRSDNSIIKVDNNLYYRKTNIIRDVLKNVTLNLKKTSKESSKNLEDG-ETLSF 291 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSN-------GALLGDST 317 + K KD+V ++N I+ + L ++ + N G +GD Sbjct: 292 YFNKEKFLKFFKDFVKSFNLFINESNKLREFEINEKSISPYQKRNDKLLYNIGPFIGDYL 351 Query: 318 LRTIQTQLKSMLSNTVSSSSYKTL---AQIGITTDPSDGKLELDADKLTAALKKDASGVG 374 L I +LK ++ K + +GI +P +G L LD DKL ++ + + Sbjct: 352 LNNITNKLKFLIRKNFDDYKNKNIIFIEDVGIKINPKNGNLILDNDKLIKNMQNNWKNLR 411 Query: 375 ALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK--TLNKLTKDYNAASDRIDA- 431 + K+ + I S + + G I + +S+ LNK K N ++ + Sbjct: 412 NFFL----KSNFISDISSFIEDNIYKKGTINSNKSIISEINNLNKQKKIINKEIEKSEML 467 Query: 432 ---QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ++ YKEQF +LD+ M+ + L+ F NN N Sbjct: 468 SYNKINMYKEQFKKLDLFMSKTDYIRKQLSALFSNNKN 505 >UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei group RepID=A3NFW3_BURP6 Length = 441 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 121/425 (28%), Positives = 191/425 (44%), Gaps = 51/425 (12%) Query: 44 LSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS--ATTAGNAIAGKYTISVTH 101 LS G+L LTTF+ L + T S AF+ ATT+G A G Y V Sbjct: 40 LSGLGSL---LTTFRDKQRELVAGGSMIQNTVTQSNDAFASVATTSG-AKPGSYQFHVEQ 95 Query: 102 LAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA-----NSSLSGIRDA 156 LA A LT D + I +D+ + D T+D++AA N S + Sbjct: 96 LATAHQLTI-----DVPSGIPAADAGSVKIKLADGSEFTVDLTAAKGEDGNVSAEELARV 150 Query: 157 INN---AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS 213 IN+ A V A++I +L +TS +TG D+ ++ + L A A Sbjct: 151 INSSSGASGNVHAAVIG-----GQLMLTSANTGADSKISFEIDSTSPL-------AGAFD 198 Query: 214 NGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTS 269 + +S AQNA++ + N IE NT+ D++E +++ V +G T+T+ D Sbjct: 199 GAVTIS-EAQNAKVKIGDPTNGKTIELQGNTL-DSIEGLSITFRQVGSG--TITVASDKE 254 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 K ++K +++AYN LID + LT+ G ++ G D+ +R + +QL+S L Sbjct: 255 KTTESVKAFIDAYNELIDKLAELTR-----VGDAAKGDPGGPFSSDAGVRALVSQLRSEL 309 Query: 330 SNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 + +V L ++GI TD GKL LD + A K L GD +TG+ Sbjct: 310 NKSVDGVK---LYELGIDTDKK-GKLVLDEKRFEQAFKASPDRFDKLF-GDA-QTGLVGN 363 Query: 390 IGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 +G L WL G +K + V++ +L R RY ++FT+L VL Sbjct: 364 LGKALDGWLNEKNGQLKTRNESVAQAEKQLLAKQQEYDRRYQDVFERYTQEFTRLQVLQL 423 Query: 449 SLNST 453 +++T Sbjct: 424 QMDNT 428 >UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GNZ5_SPHAL Length = 456 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 137/478 (28%), Positives = 219/478 (45%), Gaps = 58/478 (12%) Query: 6 SLGVGSGLDLSSILDSLT-AAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 SLG GSG+D+ ++D L+ A+++ + ++ + ++SA ++ L F + + + Sbjct: 8 SLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQM 67 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKY--TISVTHLAQAQTLTTRTTRDDTKTAIA 122 +T T S + AT+ A + T+ V LA+AQT + D T AI Sbjct: 68 IGDGTLRSTPTVSDDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRT-AAIG 126 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 T LT+ GG ITID N++L G+ DAIN + AGV+ASII G +RL + Sbjct: 127 TGTMTLTV--GGVAKTITID--GTNNNLDGLADAINASAAGVTASII-ADEGGHRL-ILK 180 Query: 183 NDTGLDNAMTL--SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 TG N TL D L SF A+ GM + +A +A+ T++ +A ++N Sbjct: 181 GPTGEANGFTLVADAGADPGLASF------ATDGGMTLGQSAADAEFTIDGIAFNRATNI 234 Query: 241 ISDALENITLNLNDVTTG-------NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 + D + ++L L G N+ L + + T + D+V YN L +SLT Sbjct: 235 VDDVVPGMSLTLKKAAPGQPVDIGANRPLDMIKQT------VGDFVAVYNQLK---ASLT 285 Query: 294 KYTAVDAGADSQSSSNGALLGDST-LRTIQTQLKSMLSNTVSSS-SYKTLAQIGITTDPS 351 ++SN L G +T LR ++ L ++ +SS S L+ IGI+ Sbjct: 286 ------------AASN--LPGATTSLRELERDLGGLIHQVISSHGSINQLSDIGISV-TK 330 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT---IGSNLTSWLSTTGIIKAAT 408 +G L +D +L AL+ DA V AL T TT I L + A Sbjct: 331 EGLLSVDNARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAI 390 Query: 409 DGVSKTL----NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 D VS++L L + +R DA R ++Q+ L+ + + +T +YL QQ + Sbjct: 391 DRVSRSLETRQRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIK 448 >UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A819_NATTJ Length = 487 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 112/502 (22%), Positives = 216/502 (43%), Gaps = 73/502 (14%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SG D +++ L ++ + + + + + L L +F ++L Sbjct: 5 GISSGFDTHGLVERLMEIERQPIQRMEKEIEQLESTKEEWRELNKTLQSFMDELSSLQDK 64 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR-----DDTKTAIA 122 DL+ + SS S T + +A Y + V+ +A+A +++ DD + Sbjct: 65 DLYFSMEAESSHEDISVTAERDVMARTYDLEVSQIARAHRISSGPIESIQDLDDVDEPLE 124 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-------------NAKAGVSASII 169 + L + G +++P TI+I + +S L+ IRD IN N + + A II Sbjct: 125 L-EGDLELYLGDEEEPYTIEIESEDS-LADIRDKINDGDLKETGDEELDNRELPLEAQII 182 Query: 170 NVGNGEYRLSVTSNDTGLDNAMT-----LSVSGDDALQSFMGYDASASSNGMEVSVAAQN 224 G+ RL + + TG +++T +V G D L + + SN ++ AQ+ Sbjct: 183 --GD---RLVIEAEQTGESHSITKIGGSENVWGQDGL-NLWNAEEDYFSNEID---KAQD 233 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-----TLTITQDTSKAQTAIKDWV 279 A+ +N + EN SNTI ++ +T+++ ++ + ++I D +KA+ I ++V Sbjct: 234 AKFQINGLDFENESNTIDHIIDGVTIDIGAISADQELPVSSLISIELDDNKAEEEISEFV 293 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 +YN + + T D D G L GDS LR + ++ +++ +++ Sbjct: 294 ESYNEIFSKLQDKGRITLADDEID-----RGPLQGDSLLRNLTRNFRTRVTDPINAEGLG 348 Query: 340 ------TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 L+Q GI D G++ D D+ A + S V G+ IG+ Sbjct: 349 LKNDRLVLSQFGIEIDRY-GEMTFDKDRFKEAQDESVSQVYEAFGGE-------HGIGAR 400 Query: 394 LTSWLSTTGIIKAATDGVSKTL----NKLTKDY--NAASDRIDAQVARYKE--------Q 439 L ++L + A + + KLT D + DR+D Q+ R E Q Sbjct: 401 LQNYLEGLSFSEGAREADMRETAIGNRKLTLDRQIDRNEDRMD-QMERRLESREDHLWSQ 459 Query: 440 FTQLDVLMTSLNSTSSYLTQQF 461 F++++ + ++ S ++L Q+ Sbjct: 460 FSRMEQALNNVYSEGNWLQHQY 481 >UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4T2_9NEIS Length = 444 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 133/449 (29%), Positives = 219/449 (48%), Gaps = 51/449 (11%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLFSATSTTSSTTAFSATTAGNAI 91 +S Q SS A+ L+SAL F++A T+LS K + + +++ S + A + + +G A Sbjct: 25 LSMQNSSAKARSDGLSKLQSALQDFRSALTSLSAKKSMVAMSASFSQSNAGTVSASGTAQ 84 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA----- 146 AG Y++ V LA AQ L D A S LT+ GG+ P ++D+++A Sbjct: 85 AGSYSLFVEQLASAQQLAY----DGVSGA---SGGTLTVSLGGN--PFSVDLASADRDGD 135 Query: 147 -NSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS--GDDAL 201 N + S I AIN A AG +++ NG RL +TS TG N + + S D AL Sbjct: 136 HNLTTSEIALAINQAAGNAGKVNAMVLTANGISRLVLTSGKTGAANTIGVDASQASDPAL 195 Query: 202 QSFMGYDASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDVTT 257 Q+ A ASS+ + AQ+A++ + + V ++ +SNT + A++ +T+ ++ Sbjct: 196 QT-----AFASSSQLS---PAQDAKVWLGGQGSGVLMQQASNTFT-AIDGVTMTFGAMSA 246 Query: 258 GNQTLTITQDTSKAQTA--IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 G Q+LT+ S + T ++++V+AYN+L+ + SLT GAD + G D Sbjct: 247 G-QSLTLNVARSDSDTGGNVQNFVDAYNTLLKSLGSLT----ASGGADKDQKA-GPFATD 300 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 + +R+++ L +++ + LA +GIT DG L LD KL L + + Sbjct: 301 AGVRSLRDHLNTLIRQSFGGVR---LADMGITA-ARDGTLSLDRSKLDKLLADQPTALDG 356 Query: 376 LIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVA 434 G G+ GS L WL +++G+I D + N L ++ D Sbjct: 357 FFNGS-NADGLLAQAGSYLDKWLNASSGLITQRKDSAQRMQNDLDAQQTRIDNQYDQAYK 415 Query: 435 RYKEQFTQLDVLMT----SLNSTSSYLTQ 459 RY QFTQL + +L+S +SY +Q Sbjct: 416 RYLAQFTQLQTMQAQMSQTLDSLNSYFSQ 444 >UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3S0_MAGSM Length = 479 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 129/488 (26%), Positives = 234/488 (47%), Gaps = 52/488 (10%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 SI+ G+ SGL + I+D L +++A LT ++ + +A S Y +L+S L ++ Sbjct: 5 SITFGGLASGLP-ADIVDQLMQSEQARLTKMNQTSNQVSATKSTYSSLESQLLALKSKAE 63 Query: 63 ALSKADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + AD F + TSS + +A +A G ++I+V LA T ++ + T TA Sbjct: 64 DMQSADFFRPHTATSSDEDVATISADSDAQEGNHSITVNQLATYDTFVSKGSVT-TTTAG 122 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-------AGVSASIINVGNG 174 ++D+ + G + + A +L+ I DAI N GV+AS++ G+ Sbjct: 123 LSADTTFSFDYNGTSYSVAL---TAGDTLADIADAITNTTYDNEDDGEGVTASVLYDGS- 178 Query: 175 EYRLSVTSNDTGLDNA---MTLSVSGDDALQSFM----GYDASASSNGMEVSVAAQNAQL 227 YRL + + D+G ++ + LS + D A S G S ++ SVA +A L Sbjct: 179 NYRLLLNARDSGTNSGASRLDLSGAADLAFDSGETITGGVTGSNDNSAWWNSVAGVDASL 238 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 TV+N+A+ +++N +SD L I ++L +TGN T++IT D +T ++ +V+++NS+I Sbjct: 239 TVDNIAVTSTTNEVSDVLAGIKMSLK--STGNFTISITNDEETLKTNVQSFVDSFNSVIS 296 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLAQ 343 + +++SS G L +T+ ++ ++ + S++ S S+Y TL+ Sbjct: 297 FIN------------NNKSSFGGDSLARNTINMLRAEINTPTSDSSSPYSELSTYSTLSS 344 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD---GKKTGITTTIGSNLTSWLST 400 IGI TD S G L +D+ + A+ S + ++ +T T G+ S+ Sbjct: 345 IGIKTDRSSGLLSIDSTDFSEAMSNGFSKIASIFTSKPSSADETAFETAGGNEGLSYRME 404 Query: 401 TGIIKAATD----------GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + + TD G+ L+ + R++ R +Q+ L+ LM+ + Sbjct: 405 SLVYSLTTDTDNPFDAKSSGLQARLDSMATSIEREESRLEKVRDRLTKQYANLEQLMSQM 464 Query: 451 NSTSSYLT 458 ST S LT Sbjct: 465 QSTQSALT 472 >UniRef50_A8ERB3 Flagellar hook-associated protein 2 n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERB3_ARCB4 Length = 445 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 144/479 (30%), Positives = 225/479 (46%), Gaps = 67/479 (13%) Query: 1 MASISSLGVGSGLDL-SSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + LG L ++++ L A KA+ +TP+ KL + T K + Q Sbjct: 1 MAGVLGLGSSGSTSLNEALIEKLKEADKASSVTPLE-------KKLEKFTTEKEVVANIQ 53 Query: 59 T-ANTALSKADLFSATSTTSSTTAF---SATTAGNAI-----------AGKYTISVTHLA 103 T N LS +FS TT + AF SA G+ + +G ++ V LA Sbjct: 54 TKVNELLSAVKVFSLNQTTGAN-AFQQKSANVTGDGVVFDSDDLSALKSGSLSVKVEQLA 112 Query: 104 QAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG 163 Q ++ T T+ S L Q + + +ID + N S S + IN +G Sbjct: 113 QKDVWQSKQFDGTT-----TTKSSLVNQGTLNINGTSIDTT--NKSYSDLVTEINKI-SG 164 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 V AS++ G++RLS+ S++TG N + + S AL F G+D + ++ + AQ Sbjct: 165 VQASLVEDSTGKFRLSIKSSETGESNKINFTGSDSTALSHF-GFDDTTNN-----VLKAQ 218 Query: 224 NAQLTVNNVAIENSSNTIS-DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 + ++ V+ V SSNTI+ D L+ IT + +TG T+ I D S +T ++ +V AY Sbjct: 219 DMKMKVDGVDYSGSSNTITIDGLK-ITAS---KSTGESTINIEDDNSNIKTQMQAFVTAY 274 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD-STLRTIQTQLKSMLSNTVSSSSYKTL 341 N+L T + S SS LGD +++R + +QLK L T S KT+ Sbjct: 275 NTL---------NTLISGEVYSTDSS----LGDKASIRNVMSQLKEQLFGT--GSGDKTI 319 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 G + D S+G L L + + A+K D G+ L VG +K GI TT L +S + Sbjct: 320 FSYGFSFDSSNGNLVLSSTEFDNAIKNDKEGLQNLFVGVAEKKGIATT----LDELISNS 375 Query: 402 GIIKAATDGVSKTLN---KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 GI K D S L+ KLT+ +AA + +DA+ EQF ++T + ++ S L Sbjct: 376 GINKDLIDYESNMLSRETKLTEQKDAAQEALDAKYKLMSEQFAAYTTIITQMENSFSGL 434 >UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. PE36 RepID=A6FHX7_9GAMM Length = 465 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 131/497 (26%), Positives = 227/497 (45%), Gaps = 77/497 (15%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA ++ G+GSG+DL SI+ + A+KA ++N++ S T +LS GTL++AL FQ Sbjct: 1 MAGMTMAGMGSGMDLESIIKTFVTAEKAPKEARLNNKEISITTELSGVGTLRAALADFQN 60 Query: 60 ANTALSKADLFSATST-------------------TSSTTAFSATTAGNAIAGKYTISVT 100 L D F + T +++ + T G G + + VT Sbjct: 61 ITNKLGNTDTFYQSKTNIQYQGRSVDSSAVRQAGESNAILPITIETKGVVPKGSFDVKVT 120 Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA 160 LAQ L + D T + + G KD +D++ A+ +L I+ IN A Sbjct: 121 KLAQGARLESDFMPDRT---VKLGQGIMYFDAG--KDSFEVDVNVAD-TLQDIQKKINEA 174 Query: 161 K--AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV 218 G+ A+IIN G ++ TS+ TG+ N +T+ S D +L A SS V Sbjct: 175 PNNYGIGANIINSDLGA-KMVYTSDKTGVANDLTVFTS-DSSL-------AMISSK--MV 223 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA--IK 276 AA +A + ++ I SNT + A+ +T+ N +T N + + T A + + Sbjct: 224 GKAASDAIIAIDGNIITQESNTFTHAVSGVTITANSLTANNDVVNFSTATDHAAVSDLVH 283 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 ++++ YN LI T ++LT D ++ G+L DST R+++ Q++S+ V+ + Sbjct: 284 EFIDGYNRLISTINTLT---------DPET---GSLKFDSTARSVKQQMQSITGGVVNGA 331 Query: 337 SYK--TLAQIGITTDPSDGKLELD----------ADKLTAALKKDASGVGALIVGDGKKT 384 S K TL GI+ + G L ++ A +L A+ +G L G+ Sbjct: 332 SSKLNTLYAAGISLEEG-GVLAINPFGSHGSQSGAQRLDHAVNNALDDLGKLFSGN---N 387 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARY----KEQF 440 G+ I + L + L+ G I ++ L L D D++D ++ Y ++++ Sbjct: 388 GVAAQINAVLDNSLNNKGTITQRQSLLNTNLRSLEDD----RDKLDRHISSYEDTLRKKY 443 Query: 441 TQLDVLMTSLNSTSSYL 457 T +D ++ N+T Y+ Sbjct: 444 TAMDNTVSRYNATGDYI 460 >UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I428_VIBHO Length = 520 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 127/530 (23%), Positives = 239/530 (45%), Gaps = 99/530 (18%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSF-TAKLSAYGTLKSALTTFQTANTAL-S 65 G+GSG+D +++ ++ AA++A + N+Q TA++ A ++ AL +F+ L + Sbjct: 5 GLGSGIDYEAMIQAIVAAERAPVENQLNRQEGMNTAEMDALKEIQGALNSFRNTVEDLNA 64 Query: 66 KADLFSATSTTSSTTAFSATTAGNAIAG-------------------------------- 93 +L + S+T +G A++G Sbjct: 65 YTELNKLKAELSNTDVMGVAVSGGAVSGEYNFDVTQLAQAARDKVLTMKKGSYLTTGKVE 124 Query: 94 ----KYTISVTHLAQAQTLTTRTT------RDDTKTAIAT--------------SDSKLT 129 K T+SV A A L T+ R DT T +A +++KL Sbjct: 125 FTTDKGTVSVDIAALATELKTKEESKKAQYRTDTLTEVAKEHNIDTSEDGWEAKAEAKLA 184 Query: 130 IQQGG----DKDPITIDISAANSSLSGI-----RDAINNAK--AGVSASIINVGNGEYRL 178 Q D D + A G+ + AIN + G +++ G+ + + Sbjct: 185 EDQEAKASFDARIKEYDQNIARYDEKGVTAEELQSAINRHENADGAKVTLVQTGD-QLTM 243 Query: 179 SVTSNDTGLDNAMT-LSVSG----DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 + + DTG+ NA+ LSV+ DD G D + S G+ + AAQ+A + N+ Sbjct: 244 VLNAKDTGVANAVKGLSVTNVTAKDDN-----GSDVAVSDLGVPLQ-AAQDAVVKFGNME 297 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 + + +N + + ++ ITL L + TG + I +D + +K ++++YN +++T ++ T Sbjct: 298 LTSPTNKMENVIDGITLTLKE--TGTVNVNIQRDEDGVKETVKTFIDSYNKVVETVNTYT 355 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 K S AL GD+ R++ ++L+S++S+ +SS+ TL+Q+GITT DG Sbjct: 356 K---------SSEEMAAALSGDAATRSMISRLRSVISDQYASSTLGTLSQLGITT-KMDG 405 Query: 354 KLELDADKLTAALKKDASGVGALIVGDG------KKTGITTTIGSNLTSWLSTTGIIKAA 407 LEL++DK A++ + + L +GD K+TGI ++ + L + G+ Sbjct: 406 TLELESDKFDKAMEDNFDEIAKLFMGDPASSVPEKQTGIMGSMLTVLDDYHKNGGLFDVR 465 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 D + +L ++ A R++A+ ++ + ++D + +N T S L Sbjct: 466 IDRLDADNQRLQEEREALDARMEAKALSLRDYYAKMDSQIAQMNQTQSML 515 >UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0G4_PELTS Length = 518 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 130/511 (25%), Positives = 230/511 (45%), Gaps = 69/511 (13%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-K 66 G+ SG+D SI++ L A++ L + + + Y L ++L TF+ ++ + Sbjct: 15 GLASGIDTDSIIEELMKAKRIPLQKLEQNKQILLWQQEDYRELNTSLRTFRDKVFSMKLQ 74 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD-------TKT 119 A + + +S+ +A A+ A+ G Y+++V LA ++ ++ D TK+ Sbjct: 75 ATYMTKKAVSSNESAIGASAGTGAVPGIYSVTVNQLAAGVSVGSQAGLPDEANGSGGTKS 134 Query: 120 AI------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 D T++ G K T + ++ + AIN A G+SAS N Sbjct: 135 LADQFFGGVVKDISFTLE--GSKGSKTFTFNTGTDNIYSVVSAINAAGLGISASYDATLN 192 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV-------AAQNAQ 226 R +T+ TG + ++ DD F+ A A + +++ + A Q+A Sbjct: 193 ---RFFLTTTSTGAAAKIKVTNDTDD----FLADAAGAGGSKLKLLLKDDGTVYAGQDAV 245 Query: 227 LTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 + + A + +S+NT++ + ITL L + T+T++ DT AIKD+V+AYN L Sbjct: 246 FSFGDAAGLTSSTNTVT--VNGITLTLKQGGGASSTVTVSNDTDAVFNAIKDFVSAYNDL 303 Query: 286 IDTFS---SLTKYTAVDAGADSQ--------------SSSNGALLGDSTLRTIQTQLKSM 328 I + S T+Y+ D Q + +G L DS L +I +++ Sbjct: 304 IGKINGKLSETRYSDYLPLTDEQRKELTDEQEKKWEEKARSGLLRNDSLLESIVIKMRMT 363 Query: 329 LSNTVSSSS----YKTLAQIGITTD--PSDGKLELDADKLTAALKKDASGVGALIVGDG- 381 +S V S Y +LA IGITT GKL +D DKL AL+KD GV L Sbjct: 364 MSAVVPGLSAGEGYNSLAGIGITTGSYSEKGKLYIDEDKLKEALQKDPEGVMNLFTKSSD 423 Query: 382 --KKTGITTTIGSNLTSWLSTTGIIKAATD---------GVSKTLNKLTKDYNAASDRID 430 + GI + ++ + ++ KA +D + + + ++ ++ + DR+ Sbjct: 424 VYSEKGIAARLYDDVNNGITLIS-EKAGSDSSYTSVDNSAIGRRIKQIDEEIDRMEDRLA 482 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY QFT L+ ++ +N+ S++L QQF Sbjct: 483 EMEDRYWRQFTALEQAVSRMNAQSAWLFQQF 513 >UniRef50_C0QA29 FliD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QA29_DESAH Length = 577 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 14/248 (5%) Query: 224 NAQLTVNNVAIENSSNT-ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 NA+ TV+ +A + SNT I+D ++ I+LN+ + TG T++ T+D +TAI++ V + Sbjct: 340 NARFTVDAIAYQRQSNTAITDVIQGISLNMTE--TGTSTISATEDLGDVKTAIQELVESL 397 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTL 341 N+L S Y DS + + G L G++ + I +L + + N +++ SS L Sbjct: 398 NTLKTEIDSNNTY-------DSDTQTKGVLFGENAVNRIDDELLTFMGNAITTGSSITNL 450 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD--GKKTGITTTIGSNLTSWLS 399 +G+ D DG +D L A L +A V +GD + TG + L ++ Sbjct: 451 FDLGLEID-EDGVFSIDETVLDAMLSANAREVQTFFIGDLESETTGFADLLNEKLRAYTG 509 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + G+I TD ++++T + + R+D + QF QLD+ M + + S YLTQ Sbjct: 510 SDGLIPTETDAAQDRIDRITTEIADDTARLDKRYEIMANQFVQLDIFMQQMTAQSDYLTQ 569 Query: 460 QFENNSNS 467 FE++++S Sbjct: 570 IFESDTDS 577 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 6/196 (3%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SIS+LG+GSGLDL ILD L A + T+T +Q+ K+ + L S L + ++ Sbjct: 4 GSISTLGIGSGLDLQGILDDLRAVDQTTITNQETEQTGIKEKVQEFNQLNSTLLSMKSTA 63 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LS F T+S A +AT+ A +++ VT LA + + + T ++ Sbjct: 64 LDLSLGSNFLNREITASGNAVTATSVSGAKTMSHSMEVTALASHSSWNSEGISEKTD-SV 122 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIIN--VGNGEYR 177 A +D + + G ++I+I A ++L G+ D IN +A GV+ASI + VG+ YR Sbjct: 123 AVADGTFSFRMGETGSSVSIEIPAG-TTLQGLADLINESDANPGVTASIADTGVGDEPYR 181 Query: 178 LSVTSNDTGLDNAMTL 193 L +TS++TG DN + + Sbjct: 182 LVLTSDNTGEDNRIFI 197 >UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A8GYK4_SHEPA Length = 472 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 113/490 (23%), Positives = 222/490 (45%), Gaps = 64/490 (13%) Query: 11 SGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 SG+ ++ + L A++A I + + + A+L AY L+ +L + + A+ Sbjct: 3 SGMGGATFAEQLIVAERAGKDQIFKSNMTKYEAQLDAYKILERSLDSMSSKLEAIDGDAF 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 S TS+ S A + +G A G Y + + LAQA +T +D+ + + + Sbjct: 63 ESKTSSVSDDNASISVESG-APTGDYDLHIEQLAQAHQVTKSFASEDS---LLPTTGVIN 118 Query: 130 IQQGGDK-DPITIDISAANS-------SLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 IQ G D D I++D+S N+ L+G+ ++ ++ GV AS++ G G+ L ++ Sbjct: 119 IQLGSDPSDSISLDMSKLNAGGTATVKDLTGMINS-HSGNPGVQASLVRTG-GQVELMLS 176 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S +TG N +++++ D A GM AAQ+A++ +N + I +SSN + Sbjct: 177 SKETGAANNISVTMDPMDG--------TGAKDWGMTERRAAQDAKVNLNGIDIVSSSNNL 228 Query: 242 SDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + ++ +++ LN ++ + I DT ++ AI+D+V+ +N L+D + LT+ + Sbjct: 229 VNVIDGVSIELNKAHKPGESSNIKIESDTDASEQAIEDFVDIFNDLMDEINKLTRSMGSE 288 Query: 300 AGADSQSSSN--------------------------------GALLGDSTLRTIQTQLKS 327 A D + N G L GDS++R +Q ++ Sbjct: 289 A-LDELNQENADKDDNSDEDKEDEDKEDDEDDSNSSITEDQLGVLKGDSSIRMLQQNMRD 347 Query: 328 MLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 + + + L+ IG+ DGKL++D++KL+ ALK + + V + G Sbjct: 348 AIFDAAPNG--MRLSDIGVEF-GRDGKLDVDSEKLSKALKDNPNAVQDMFTDTGSYVDKL 404 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 I T + G + D + + ++ + +++ + Y QFT ++ + Sbjct: 405 DKIIEPFTQF---QGSMDLKKDNLEMQIERVETSMDNHDRQMEQRYQIYLAQFTAMEATI 461 Query: 448 TSLNSTSSYL 457 + L S+S+ Sbjct: 462 SQLQSSSALF 471 >UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30U48_SULDN Length = 462 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/479 (26%), Positives = 223/479 (46%), Gaps = 34/479 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTA 60 ++ISSLG+GSG+ + ++D L A + + P+ N+ + K AY L S + TF+ + Sbjct: 3 SNISSLGIGSGVLTADVIDQLKEADTSRIVKPLENKITLNNQKQDAYKLLDSLMKTFKAS 62 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +ALS +F + S SS A AG+ + +++ LA+ + +T + + Sbjct: 63 ASALSYDTIFDSKSVKSSGKAEVKVDAGSTVE-SFSLETVALAK-KDITKFGSVATPAST 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IA+ L I T +SA S++ I A + VSAS++ GNG Y L + Sbjct: 121 IASGAGVLKINNFEIPYDGTTTLSALAQSITEI------AGSSVSASVLQTGNGSYNLVL 174 Query: 181 TSNDTGLDNAMTLS-----VSGDDALQS--FMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +S TG A+++S +G +L + F Y+A + NG E A +A N +A Sbjct: 175 SSKSTGASQAISVSDTDDGTAGAGSLNAALFDPYNAITNPNGYEKVQTASDATFKYNGIA 234 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLT-ITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + ++N +SD + + + L G+ +L I+QD++ +K + ++YN+LI + Sbjct: 235 MTRATNEVSDLILGVNIKLKQ--EGDFSLVDISQDSTAISDELKLFTDSYNALIANLHDM 292 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 T D + + G G+S +++I L + T +++ +L GI D S Sbjct: 293 TL-------KDEATGAEGIFNGNSFVKSISRDLTRTI--TSLNTNNNSLINYGIDIDRS- 342 Query: 353 GKLELDADKLTAALKKDASGVGALIVG----DGKK-TGITTTIGSNLTSWLSTTGIIKAA 407 GK+ + L LK+D V G +G K TG TT+ L S+ ++ Sbjct: 343 GKMSFNKATLETKLKEDPDAVKLFFTGGTNSEGNKVTGFFTTVDEKLKSYTGYGNLLSNF 402 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L+K++ AA +D + ++FT D +++ +NS S L + +N Sbjct: 403 ETDLKNEGKSLSKNHAAAKASLDTRYEIMAKRFTAYDGMISRINSQFSSLQMMIDAEAN 461 >UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3B5_BURCC Length = 453 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 124/434 (28%), Positives = 199/434 (45%), Gaps = 59/434 (13%) Query: 50 LKSALTTFQTANTALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT- 107 L+ AL +FQ A LS + ++ S+ AT + N +G+Y V LA A Sbjct: 44 LQGALNSFQNALKGLSGVGGIVKQKASLSNQALGEATASANPQSGRYAFFVKQLASAHQV 103 Query: 108 ----LTTRTTRDD--TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSG------IRD 155 L++ +D A+AT +S +D+SAAN+ SG + Sbjct: 104 AFKGLSSYAAKDAGTLGIALATGES------------FRVDLSAANADASGNVSPAELAR 151 Query: 156 AINNA---KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSG--DDALQSFMGYDAS 210 AIN A K VSASI+ + GE RL +TS TG +A++L SG D AL + + Sbjct: 152 AINQAVDNKGKVSASIVTI-EGEQRLVLTSGGTGEASAISLDTSGIGDAALSAVL----- 205 Query: 211 ASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDALENITLNLND-VTTGNQTLT--I 264 S E+S+A ++A + V I+ SSNT + ++ +++ + G+ L I Sbjct: 206 -SGPPDELSMA-RDAIFKLGGESGVDIKQSSNTFT-GIQGVSVTFKQSMVEGDAPLLLDI 262 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 D A++ +V+AYN + + LTK D S+ G +GD+ +R +Q + Sbjct: 263 KLDQVGTTDAVQAFVDAYNKAMGVLAELTKVNPDD------PSNAGPFVGDAGVRHLQQR 316 Query: 325 LKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 + ++L TV + + GI+ D + GKL LD KL AAL K+ +G+ AL D +K Sbjct: 317 MNALLRATVGE---RRMLDYGISADRA-GKLSLDTGKLNAALAKNPNGLDALFA-DPEK- 370 Query: 385 GITTTIGSNLTSWLSTT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 G+ + + L +W S+ G +K + L K + + RY QFT++ Sbjct: 371 GVVARMDAYLKTWTSSVDGQVKRRQESAELIEQSLKKKERSLEVQYRQVYGRYLTQFTRV 430 Query: 444 DVLMTSLNSTSSYL 457 L + T L Sbjct: 431 AELQKRMEYTKQLL 444 >UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQ71_BDEBA Length = 455 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 89/380 (23%), Positives = 167/380 (43%), Gaps = 33/380 (8%) Query: 87 AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA 146 G+AI G Y I V LAQ + D +T I K +G + + I+ + Sbjct: 88 PGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQTQIGVGYIKFETPEGTKE----VYINGS 143 Query: 147 NSSLSGIRDAINNAKAGVSASIINVGNGE---YRLSVTSNDTGLDNAMTLS----VSGDD 199 NS+L G+ IN A G+ A ++ + ++L V+ TG D+ +T + GD Sbjct: 144 NSTLDGVMKQINAANVGLKAQVVEDRKDQENPFKLLVSGLSTGNDSQVTFPKIYLLDGDQ 203 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN 259 + Y E S AQNA++ V+ IE N +D + +TL+ G Sbjct: 204 DM-----Y--------FEESRKAQNAKVKVDGFEIELPDNKSTDLVPGVTLDFKSAAPGR 250 Query: 260 Q-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTL 318 + L++ ++ IK +V++YN+ ++ K A + ++ + G L GD L Sbjct: 251 EIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNKLQA----GNGKNPALGPLGGDGML 306 Query: 319 RTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGAL 376 R+I+ L+ ++ N S + + ++GI + +G L DK L+ + V A Sbjct: 307 RSIENSLRRVILNPQMGVESPIRRVGELGIEFN-RNGTLNFSQDKFNKVLQANPKAVAAF 365 Query: 377 IVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 + GDG TG +T+ + + ++ G I G+ + ++ +++ + Sbjct: 366 LRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGLEDRIKQVNNRIETKERQLERKEDS 425 Query: 436 YKEQFTQLDVLMTSLNSTSS 455 + +F L+ M++LN+ + Sbjct: 426 LRRKFADLEQKMSALNAQQA 445 >UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4V0A4_YERRO Length = 445 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 51/446 (11%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD--LFSATSTTSSTTAFSATTA 87 L + Q S F ++ + ++S L F+TA + ++K D + + TS + T Sbjct: 22 LNRLKGQHSQFKSEQDSLNKIQSGLNDFRTALSGINKKDEGILKLKTNTSDEKIATVTAN 81 Query: 88 GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAAN 147 A+ G Y + VT LA + L + +D + AT +L I D I ID S Sbjct: 82 HKAVKGSYDLFVTQLASSHQLALKDL-NDAAVSSATGAFELEI----DGKTINIDTSGL- 135 Query: 148 SSLSGIRDAIN--------NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD 199 SS++ + +AIN + K V+AS+I G GE L+++SN +G NA+T+ + Sbjct: 136 SSVAELAEAINKNKDNQGSDKKELVTASLIRTG-GEVVLTISSNKSGAANAITIP---NG 191 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAIENSSNTISDALENITLNLNDV 255 A F G ++ +E+S AA +A++++ N + I + SNT+ ++ +T+NL V Sbjct: 192 AATIFTG------ASEVELSAAA-DAKVSLGNENSGIEITHPSNTLDTVVDGVTINLVKV 244 Query: 256 -TTGNQTLTI--TQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGAL 312 TG+ L I DTS Q +K +V+A+NS+ + + T D G D+ + + Sbjct: 245 QKTGDTPLHIDVEMDTSATQEQVKKFVDAFNSVKKLVTPV--RTKADEGKDNTGKPSYSR 302 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASG 372 + + + + L S++ +V+ K + GI T+ DG LE+D+ K A+K D G Sbjct: 303 NSNEGISALSSALNSLVRQSVNG---KRILDYGIKTN-RDGGLEIDSKKFEQAIKADPKG 358 Query: 373 VGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 + L+ GD G+ + S + +++ + G+IK G +++L + T DR++ Sbjct: 359 LQDLLNGDA---GLLNKLDSAIEPYINKSNGLIK----GRTESLERRTTSIRDQLDRLEK 411 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYL 457 Q Y+++ V T++ +T+ + Sbjct: 412 Q---YEQKIIFYTVKFTTIKNTADKM 434 >UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6F7_9GAMM Length = 561 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 23/323 (7%) Query: 146 ANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV-TSNDTGLDNAMTLSVSGDDALQSF 204 A ++ + D IN A V+AS+ + G ++L +SND G N S D ++ Sbjct: 247 AGETIEQVVDKINAAGINVTASLEDDNAGGFKLVYQSSNDYG--NHQVAITSADASMSKL 304 Query: 205 MGYDASASSNGMEVSVAAQNAQLTVN-NVAIENSSNTISDALENITLNLNDV--TTGNQT 261 + + +N E + AA AQ+T+N ++ + + +NT +A+ ++L + T + Sbjct: 305 L--KSHEYANFTE-NTAASKAQITLNGSIVVTSETNTFENAVAGLSLEVKKAHDATASDN 361 Query: 262 LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTI 321 + I D + A+K +V +YN + + LT+ ++ + G L+GDST+RT+ Sbjct: 362 IKINLDKGSTEEAVKKFVESYNEMFAVVAELTQV--------NEDGTAGQLVGDSTIRTM 413 Query: 322 QTQLKSMLSNTVSSSSYKT--LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 QL+ L V+ + T LA IGI T+ DG L L+ LT L + GAL G Sbjct: 414 MNQLRGALGGIVTIDKFSTQSLASIGIKTE-RDGTLSLNEATLTKQLNSNFEQFGALFAG 472 Query: 380 DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 D GI + + ++ + GI+++ + +++++ ++ +R+ AR Q Sbjct: 473 D---EGIGKALSNVVSEYKGIGGIVESKIKSATSSIDRINEERTDFDERMGRYEARLFSQ 529 Query: 440 FTQLDVLMTSLNSTSSYLTQQFE 462 FT +D+L++ L +T YLT Q + Sbjct: 530 FTTMDLLVSQLQATGDYLTAQLD 552 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 15/207 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQ----QSSFTAKLSAYGTLKSALTT 56 MA++SS G+G+G ++ + SL AA++ P + ++ T ++S G LKSAL+ Sbjct: 1 MATLSSPGIGTGFKVTETVQSLVAAERE---PFDKKKLAAENKLTEQISGLGKLKSALSD 57 Query: 57 FQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD 116 L FS S+ F+A A Y + V +A Q +TT D Sbjct: 58 LDDTIFDLKLPTTFSKRQVDYSSDFFTAEAGSAASVSSYDVQVNKVAAGQKVTTGPI--D 115 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNG 174 AI + L I+ G +I + A +++ I IN + A GV+AS++ +G Sbjct: 116 ASAAIGS--GTLEIRSLGLNKGFSIAVEAGQ-TINDIAAQINGSSANFGVTASVVKGDSG 172 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDAL 201 Y L+++SN TG ++ ++L+V+ D Sbjct: 173 SY-LTLSSNQTGDNSVLSLNVTDSDGF 198 >UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 Tax=Desulfovibrio RepID=B8DS94_DESVM Length = 577 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 113/411 (27%), Positives = 197/411 (47%), Gaps = 54/411 (13%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+G+G D S ++D L + ++ ++ ++ + + A+G L++ + + + ++S Sbjct: 13 GLGNGTDFSKVIDQLKSIEQIPQKRLTLWKADWQRRQDAFGELRTEIASLKDIVDSMSTM 72 Query: 68 DLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI--ATS 124 + F T ++S+ T SATT + + G Y I V LA + T T D KT + + S Sbjct: 73 NKFLVKTGSSSAETVASATTDSSVLEGNYKIEVGQLASSSIWTYNTAFADKKTKVNDSGS 132 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSVTS 182 D + G IT+ + +++ +++ INN GV A ++ G G Y Sbjct: 133 DQQFVYTYMGKTRSITV---PSGTTIDALKNMINNDPQNPGVKAMLVQNGTG-YTFQFRG 188 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA----IENSS 238 D G NA TLSV D+ + G +A++ ++ A+QNA+ VN +E++S Sbjct: 189 MDLGA-NA-TLSV---DSGTTVTGLPGTAATWTVQ---ASQNAKYRVNGWPAATWLESAS 240 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 NT++ A+E +TL L DV G +++ DT K + +K +V+A N++ S + + TAV Sbjct: 241 NTLTGAVEGMTLTLKDV--GTTQISVATDTEKIKENVKSFVDAMNAV---RSKIKELTAV 295 Query: 299 DAGADSQ---------SSSNGALL-GDSTLRTIQTQLKSMLSNTVSSSSYK--------- 339 ++ D S G++L G+ ++ + TQLK ++ + Y+ Sbjct: 296 NSSKDVDNPDDASSLYSMQKGSILTGNYGVQLLSTQLKMATADRAAGFEYQYKDGNLLRG 355 Query: 340 ----TLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGDG 381 +LA IGI T+ G LELD KL LK + + V L DG Sbjct: 356 DEFSSLAHIGILTNAETNSLNAGLLELDEAKLDEVLKNNPTAVAELFAADG 406 >UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8H4_KINRD Length = 523 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 143/538 (26%), Positives = 242/538 (44%), Gaps = 93/538 (17%) Query: 1 MASISSL---GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 M++ISS G+ SGL SSI+ SL A AT T + + SS K++AY ++ S + Sbjct: 1 MSTISSSSVDGLVSGLQTSSIISSLIAVDSATQTRLKSSVSSTQLKITAYQSVSSKMLAV 60 Query: 58 QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 Q A T L A ++ T TSS + + +T A AG + SVT +A +T+T+ Sbjct: 61 QEAATKLQAATAWTPTKATSSDKSVAVSTTEAASAGSVSFSVTGVAAGRTVTSAI----F 116 Query: 118 KTAIATSDSKLTIQQGGDK------DPITIDISAANSSLSGIRDAINNAK-AGVSASIIN 170 + A ++LT GG D + I+ ++ L + A+N+A G+ A I Sbjct: 117 NSKAADKGAELTSALGGSPLDVVRSDGKFVTITPSSGDLEAVAKAVNDAADLGIKAVAIR 176 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG--MEVSVAAQN-AQL 227 VG+G+YRL +TS TG GD + +G +AS +G EV AQ+ A L Sbjct: 177 VGDGQYRLQITSTKTGASE-------GDFKIVPSVGGNASTGRDGKLREVGFDAQDFADL 229 Query: 228 TVNNV------------------------AIENSSNTISDALENITLNLN-------DVT 256 V +V + + +NT SD + ++ ++ D Sbjct: 230 NVQDVTRTGGTGYTASSSKDASILLATGDPMTSPTNTFSDIIAGLSFTVSAESPFKADAP 289 Query: 257 TGNQ--TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLG 314 T + T+++ +++ ++K V+A N+ +D + ++ +V AD + G L G Sbjct: 290 TEREKATVSVAPNSAAVAASMKALVDAANAALDDVALQSRAASVS--ADGSVTGGGTLRG 347 Query: 315 DSTLRTIQTQLKSMLSNTVSSSSYKT-LAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 D LR++++Q+ ++ ++++ T A G+ + DGKL AA +KD +G+ Sbjct: 348 DPALRSLRSQIIEAVTGNITATGINTSAASFGVES-TRDGKLVFKEGSFLAAYEKDPTGL 406 Query: 374 -------------GALIVGDGKKTGITTTIGSNLTSWLST---TGIIKAATDGVSKTLNK 417 G +V D K GI T + + + + T I A DG T+ + Sbjct: 407 KDLVAKRSTTVVDGKTVVADDGKDGIATRLRNVVDQAIGRKEDTAIGLKALDG---TITQ 463 Query: 418 LTKDYNAA----SDRI--------DAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + N + +RI D Q A Y++ + L+V + L S SS+L Q N Sbjct: 464 IITNQNISIADLKNRIADWDVKLKDKQ-AYYQKYYGALEVQLGKLQSQSSWLAGQLSN 520 >UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LW28_PHOPR Length = 514 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 83/310 (26%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 153 IRDAINNAKA--GVSASIINVGNGEYRLSVTSNDTGLDNAM---TLSVSGDDALQSFMGY 207 ++ AIN+ A GV A+++ G+G + + DTG+ NA+ T++++ D + + Sbjct: 215 LQSAINSDPANDGVKATLVRSGDG-ISMVLNGKDTGVTNAIGAITVAIAPADIKGNTL-- 271 Query: 208 DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD 267 D + NG + A++A + ++ + +++N + + ++ ITLN+ + T N + + +D Sbjct: 272 DLALPVNGQKSLQTAEDATVQFGSMTLTSATNKMENVIDGITLNIKEKGTVN--VKVERD 329 Query: 268 TSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 + + IK +V YN +I+T ++ TK S AL GDS R++ ++L+ Sbjct: 330 EASVNSTIKSFVADYNKIIETVNTYTK---------SSEDKAAALSGDSATRSMVSRLRG 380 Query: 328 MLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 ++ SS+Y TL+Q+GITT G LE+D KL AL+ D V L +GDG +TG+ Sbjct: 381 VIGAEYGSSTYNTLSQLGITT-TRQGTLEIDQKKLDKALEDDFDAVSKLFIGDGVQTGMM 439 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 + L + G D + ++ +D R++A+ + + ++D + Sbjct: 440 DKMMVVLDDYHKNGGTYDRRIDQLEYNNKQIAEDREKLDSRMEAKTLSLRAYYARMDSQI 499 Query: 448 TSLNSTSSYL 457 +N T S L Sbjct: 500 ARMNQTQSML 509 >UniRef50_A0LT48 Flagellar hook-associated 2 domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT48_ACIC1 Length = 664 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 105/355 (29%), Positives = 177/355 (49%), Gaps = 22/355 (6%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGL+ ++I++++ T + NQ + AKL+AY + L Q+A A++ Sbjct: 33 GLISGLNTTAIINAIMQQAAQPQTNLKNQLTVEQAKLTAYQGINQQLAALQSAADAVTSP 92 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 + A + TSS+ + +A+ + A AG +T VT LA QT + T T T I T+ S Sbjct: 93 TTWQAMAVTSSSASVTASVSAGAQAGTFTFDVTQLASGQTSVSANTVSSTST-IVTTGSP 151 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 +T+ G P+TI+ + SL+ + IN+A GV ASI+ VG YRL ++S TG Sbjct: 152 VTLTV-GSGSPVTIN--TGDGSLAAVAAGINSANLGVQASIVQVGTSSYRLQLSSTSTGA 208 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALEN 247 D A T+S L SF + ++++ ++V A T I + +NT + L Sbjct: 209 DTAFTISGLNGGPLGSF---NNTSTAQDAVITVGAG----TPGQYTISSHTNTFNQVLPG 261 Query: 248 ITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSS 307 +T ++ V +G +LT+T D S IK V+A N+++ + + T Y D + Sbjct: 262 LTFTVSQVASG-VSLTVTPDASGIADKIKAMVDAANAVLSSIDTATAY-------DPSNQ 313 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKL 362 L GD T+ I+ + S +S+ V ++ T + +T DG++ DA+ Sbjct: 314 QASVLTGDLTVNQIRNSILSAVSSIVGANQSATSVGLSVT---KDGQITFDANAF 365 >UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=Campylobacter jejuni subsp. jejuni 1336 RepID=D2MS44_CAMJE Length = 647 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/378 (28%), Positives = 178/378 (47%), Gaps = 58/378 (15%) Query: 1 MASISSLGVGSGLDLSSILDSL-TAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 S+SSLG GSG+ LD L A QKA + P + + T K LK+ L+ FQ Sbjct: 3 FGSLSSLGFGSGVLTQETLDKLKEAEQKARIDPYTKKIEENTTKQKDLTELKTKLSAFQA 62 Query: 60 ANTALSKADLFSATSTTSSTT----AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 A ++L + F+ +S T A + T+G A+ I+VT LAQ ++ + Sbjct: 63 AVSSLGDSTAFAKRKVIASITDNPPASLSVTSGVALQS-MNINVTQLAQKDVYQSKGLVN 121 Query: 116 DTKTAIAT--SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVG 172 DT A+ + LT G + +TID N++ S + D IN A G + A ++N G Sbjct: 122 DTGIINASLKEPTNLTFFSNGKEYSVTID---KNTTYSDLVDKINTATGGEIVAKMVNTG 178 Query: 173 --NGEYRLSVTSNDTGLDNAMTLSVSG-------------------------DDALQSFM 205 + YRL++TS +TG D+A++ +DAL++ Sbjct: 179 EKDAPYRLTLTSKETGEDSAISFYPGAKDSDGKYKVDENAKSVFESLGWKLDEDALKA-E 237 Query: 206 GYDASASSNGMEVS---------VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT 256 +D + S G+ + AQ+A+ T++ + + SSNTI+D ITL LN Sbjct: 238 DFDPAKSKKGVGIIDSEDNPLHIQKAQDAKFTMDGIKMTRSSNTITDLGVGITLTLN--K 295 Query: 257 TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDS 316 TG + QD+ A++D V+AYN L+ ++ T Y +S++ + G+L G + Sbjct: 296 TGEINFDVQQDSESVTKAMQDMVDAYNDLVLNLNAATDY-------NSETGTKGSLQGVT 348 Query: 317 TLRTIQTQLKSMLSNTVS 334 + +I++ + S L T S Sbjct: 349 EVNSIRSSIISALFKTQS 366 >UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVA5_9GAMM Length = 482 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 135/482 (28%), Positives = 221/482 (45%), Gaps = 51/482 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-----LTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 +++L GSG+D+ S+ +LT A+K T I N + A++S YG + S L+ Q Sbjct: 21 MTALDAGSGVDVVSLARNLTDAEKVPKQALIQTAIDNAE----AQVSGYGLISSQLSLLQ 76 Query: 59 TANTALSK----ADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT 113 TA +L+ A+ + AT+ T+ TAF G + G Y ISV LA Q + + Sbjct: 77 TAFESLNDSSEVANSYGATTDTALGFTAFD----GTEVDGSYAISVEKLALEQIMISDE- 131 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 + + AI T DS G T I+ ++ + +G+ AIN A GV+AS+++ G Sbjct: 132 YNASDYAIGT-DSFDISITVGSSSTTTTAITVSSLTPAGVVSAINTADTGVTASLVDTGT 190 Query: 174 G--EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 G YR+ +T TG + T+S + D +G+ + N ++ AAQ+A++ + Sbjct: 191 GGTNYRIILTGK-TGSEGVFTISSNPD------LGF--GDTGNTLQ---AAQDAEIEFDG 238 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 + I SN SD + TL L + TT T+ I DTS QT +++ V YN D Sbjct: 239 LTITRDSNEFSDVVTGATLTLYETTTSAATVAIYSDTSALQTKLENIVTVYNDFRDLMDE 298 Query: 292 LTKYTAVDAGADSQSSSNGALLGD-STLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITT 348 LT T D +G L D ++ R I Q++ L S++S + IG+T Sbjct: 299 LTTST-----IDEDIEHSGDLQRDFASARYITNQIRDALREDSSTASGEISAFRDIGVTI 353 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGD--------GKKTGITTTIGSNLTSWLST 400 + S G L D A++ + + V ++ + G+ + S + + L++ Sbjct: 354 N-SKGDLTFDEATFDEAVEDNYNDVVMMLTANTNDQTLYGSSSVGMAQDVASVIEALLAS 412 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 GI+ + ++ R++ RY QFT ++VL LN YLT Q Sbjct: 413 DGIVATRESNAEDLGEEYEEELATLETRMELLYDRYISQFTAMEVLTEKLNGIKDYLTGQ 472 Query: 461 FE 462 E Sbjct: 473 LE 474 >UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGD3_9PROT Length = 458 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 119/472 (25%), Positives = 217/472 (45%), Gaps = 43/472 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS+GVGS + +LD L AA + +TPI+ ++ K A + +++T + Sbjct: 3 ISSVGVGSSILTQDVLDQLRAADEGGQITPITLSLANEGDKKDALALIDASMTNLIDSIN 62 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT--TRDDTKTA 120 + L+ TT + ++ + T A N+ +T++VT LA Q + + + DD + Sbjct: 63 EIKSQSLYDERKTTLTGSSVAVTAAANSDIQDFTLNVTTLATKQIEQSGSFGSEDDLVSG 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLS 179 A I D ID +A ++L +++ IN+ A V A+++ +G ++RL Sbjct: 123 GAGQ-----INLNIDGQDFAIDYTAT-TTLKELKNLINDVAGDKVDATVVQIGASDFRLF 176 Query: 180 VTSNDTGLDNAMTLS-VSG--DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 ++S DTG +T++ V+G D L + +DA A +G+ NA T N AI Sbjct: 177 ISSADTGTTQNITITDVTGTIDSKLST--DFDAVAIQSGV-------NAAFTFNGQAISR 227 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 +SN + D + + + L TG+ +++ QD + +V YN+ I +TK + Sbjct: 228 TSNQVDDLITGLKITLQ--ATGSTDVSVQQDRENILSKFDSFVEKYNATITELDKMTKPS 285 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 + S G G+ST++ ++ ++ M+ + +L G D S G + Sbjct: 286 -------TDSDERGIFSGESTIKNMKRAIEDMIGSIGGGVG--SLLDYGFDVDKS-GTMT 335 Query: 357 LDADKLTAALKKDASGVGALIVG------DGKKT---GITTTIGSNLTSWLSTTGIIKAA 407 LD L + +++S V G DG T G T + + + + Sbjct: 336 LDKTVLETKMDENSSNVEIFFAGGDFDNGDGTTTTVDGAFTEFSAKVEEYTKYNATLDQF 395 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 D +S+T++ L A++R+DA+ K+QF D++++ +NS SS Q Sbjct: 396 KDSISETISSLEDRKAKATERLDAKYEILKKQFIAYDLMISRINSASSMFVQ 447 >UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEL3_ARTCA Length = 444 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 72/476 (15%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGLD +++++SL + A I + ++ ++SA L SA+ T L++ Sbjct: 7 GLSSGLDTTTLINSLMTLEAAPQNLIKTRAAAVQNRISALQGLNSAVADLATKAAKLAEP 66 Query: 68 ---DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR--TTRDDTKTAIA 122 +L++ATS++ T A AG A G +V+ LAQ Q T+ + DT I Sbjct: 67 KGLELYTATSSSPKVTI--AVGAG-AKPGTVDFTVSQLAQMQVSVTKNLSAWPDTTLTIT 123 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 D K T ++ +++SL + A+N + AGV+AS I+VG GEYRL S Sbjct: 124 GQDGKAT------------SVTPSSTSLDDVVSAVNASGAGVTASKISVGGGEYRLQFAS 171 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL-----TVNNVAIENS 237 TG T+S G A + AQ+AQ+ T + + Sbjct: 172 AKTGAAGGFTVSGLGGPA--------------DLTTVQTAQDAQIKLWTGTSAEATLSSP 217 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY-T 296 +NT +D L+ ++ +++V+ +T+ +D ++ A D V+ N ++ S+ T T Sbjct: 218 TNTFADLLQGVSATVSEVSATPTRVTVVRDNAQISRAATDLVSTANGVLAQISTKTAVVT 277 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 + DA + +S+ G GDS +RT+ T + + S + ++ ++ GI+ + G +E Sbjct: 278 STDAAGNPITSA-GIFTGDSAIRTVSTAVLAAASAPIGG---RSPSEFGISVTKT-GTVE 332 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS---- 412 DA K + AL KD +G A + +TI + S K A+D V+ Sbjct: 333 FDATKFSEALAKDPAGTMAAV----------STIAGRVAS------AAKQASDPVNGLIS 376 Query: 413 ---KTLNKLTKDYNAA----SDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 K KDY A DR+ + + ++ L+V ++ + + S++L+ Q Sbjct: 377 TKIKGQQSTAKDYAAQIESWDDRLQTRRETLQRTYSALEVALSGMKAQSAWLSSQL 432 >UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMQ7_9BACT Length = 542 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 101/388 (26%), Positives = 191/388 (49%), Gaps = 30/388 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SSL VGSGL+ I+D+L A++A + I+ + T ++S+ G +K TF + Sbjct: 6 LSSLNVGSGLNTKEIIDALVEAERAPKASEITTAKEKRTVEISSLGQVKQGFETF---DN 62 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYT--ISVTHLAQAQTL-----TTRTTRD 115 +L+ + S +SS T+ + + +A ++ I +T +A QTL ++ T Sbjct: 63 SLTPVKEITGLSASSSGTSMAVEISDAKVASNFSNSIEITAVASGQTLVFGGYSSETAST 122 Query: 116 DTKT---AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T T + T +S + + + + ++ +L+ +RDA+N A V+ASI+ G Sbjct: 123 GTGTLTFSFGTWNSDNSFTANSSRSDVAVQLATGAGTLADLRDAVNAANMDVTASILKTG 182 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 + Y L + + + G +AM ++ S D + + +N ++ +VAA +A T++ V Sbjct: 183 SSTYALVLKARE-GAAHAMRVTASEDTGAAGLANFAYTTPNNSVQ-TVAAADAAFTMDGV 240 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 A+ +N ++D ++ + L + T+ +T++ + DT+ AQ A++ V+ NS+ T L Sbjct: 241 AVTRETNEVTDLIKGVKLTVKSTTSAAETISGSYDTTLAQAAMQIMVDQINSIGTTLRDL 300 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS----YKTLAQIGITT 348 +K A AG + + L GD+ + ++ QL+ + ++ Y L G+TT Sbjct: 301 SKRGA--AGEE-----DAPLAGDAYVMMLRRQLRGYTTTPITGFGDNDIY--LTDFGVTT 351 Query: 349 DPSDGKLELDADKLTAALKKDASGVGAL 376 + DG L LD K + D AL Sbjct: 352 N-RDGTLSLDTAKFQKTYEADPDAFAAL 378 >UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P7_NITSB Length = 452 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 127/458 (27%), Positives = 209/458 (45%), Gaps = 48/458 (10%) Query: 11 SGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLF 70 +G D ++ LD L + L + QQ AK +A +KSAL+ F + T L + ++ Sbjct: 13 TGFDYNAYLDKLAQLKSIPLQQMQAQQQKIIAKSTAIVQVKSALSDFLSPLTTLQDSSIY 72 Query: 71 SATSTTSSTTAFSATTAG--NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS-K 127 T S ++ + A G Y + V LA+A + ++ T A +DS Sbjct: 73 DKLDATLSNDNIASVSVDGTKAQPGSYNLEVVQLAKASSFLISPAQNVTDPNAAFTDSGT 132 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN---GEYRLSVTSND 184 LTI D ++DI SL+ I + IN + A + A++IN G+ +YR+ VTS Sbjct: 133 LTINYKLDGTATSLDIDYTGKSLADIVNEINQS-ADLEATMINSGSSTSPDYRILVTSKK 191 Query: 185 TGLDNAMT-LSVSGDDALQSF-MGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 TG+DN +T +S S D F D S + AAQNAQ+ +N + IEN++NT S Sbjct: 192 TGIDNEITGISDSDGDNTTGFDTNSDPSTDPRASYTTQAAQNAQIKLNGIIIENATNTFS 251 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 D L + + +V G +LT+ +D S + ++ V+AYN+L DT + +T Sbjct: 252 DVLSGVEITAQEV--GTSSLTVAKDFSDIENSLDTIVSAYNTLKDTINQVT--------- 300 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKL 362 + L G+ +L I T + + L++ + Y L G + + GKL L D L Sbjct: 301 ----AKGQPLQGEGSLSRITTTIFNKLNSVL--GQYGLLDTTG-EGEAATGKLVLKKDAL 353 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDY 422 +L D + D K T T + +L S++ + + + + + Y Sbjct: 354 -ESLFNDPN-------FDAKTT--FTNMARDLESYV----------NNYTDNMTLINERY 393 Query: 423 NAASDRIDAQVARYKEQF-TQLDVLMTSLNSTSSYLTQ 459 SDRI ++ E+ ++D L T + YL+Q Sbjct: 394 LEQSDRIQKEIEEKSERIQKEIDALRTRYAKINVYLSQ 431 >UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKF6_MOOTA Length = 632 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 56/367 (15%) Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAIN--------NAKAG--VSASIINVGNGEYR 177 TI G + ITI+ N SL I IN AG V+AS+I ++R Sbjct: 280 FTITVGSETRNITIN---ENDSLQSIASLINAVPSEGETGPGAGDIVTASVI-----DHR 331 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +TS TG + A++ S D L DAS V A++A TV+ + I S Sbjct: 332 LVITSKTTGSNGAISFS-DPDGVLNKLGLVDASGVILPRAVIQDAKDAVFTVDGLTITRS 390 Query: 238 SNTISDALENITLNLNDV--TTGNQT--------LTITQDTSKAQTAIKDWVNAYNSLID 287 +NTI+D ++ +TLNL V T GN T L I+ DT KA AI+ V+ YNS+++ Sbjct: 391 TNTITDVIQGVTLNLLAVTDTNGNGTIEPAETLNLEISHDTQKAVDAIQAMVDQYNSVME 450 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIG 345 S +++ G L GD TL + L ++++ V+ + +Y+T IG Sbjct: 451 FIS-------------TKAGDKGDLQGDPTLARFKNDLWQLMTDRVAGLTGTYQTPWSIG 497 Query: 346 ITTDP----------SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 I+T +GK+ LD KLT+AL+ D + V A I + +TG+ + S LT Sbjct: 498 ISTGAVVGSGSLTFDRNGKITLDTTKLTSALETDPTAVMA-IFTNSSETGLVDKLDSYLT 556 Query: 396 SWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 S + S GII + + ++ + DR+ + + + QFT ++ + +L S Sbjct: 557 SLVRSGDGIIPSREQSLQNIMDDIDDQIARMEDRLTMREEQLRRQFTAMEQALAALQSQG 616 Query: 455 SYLTQQF 461 ++L Q Sbjct: 617 NWLAGQI 623 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGLD SI+ L ++ LT + +++ + + +A+ + + L++ Q+ L A Sbjct: 9 GLASGLDTESIITQLMDLERIPLTRLQQRKNQYNVEKNAWHDIYTRLSSLQSKLGDLKLA 68 Query: 68 DLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 F+ TSS T A +AT A NA AG Y +S+ LAQA + ++ Sbjct: 69 STFTGMKATSSNTLALTATAASNAPAGSYQVSIIQLAQAHKVASQ 113 >UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31230 Length = 475 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 128/498 (25%), Positives = 209/498 (41%), Gaps = 55/498 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ SGL+ I++ + A +K + N+Q K ++ L Q A Sbjct: 1 MAGINFSGIASGLNTGEIIEQMMAIEKRPRILLDNKQVLIETKQGLLRDFQTKLRALQLA 60 Query: 61 NTALSKADLFSATSTTSST--TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 T L L++ T + S+ T SA++ A G Y I V+ LA A T TR Sbjct: 61 ATDLRSVSLWTQTQSVESSDATKVSASSTSGAGVGGYQIEVSQLANAAQRTYTFTR---- 116 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-AGVSASIINVGNGEYR 177 +D +T+ G I ++A + AIN + A V A+ + G Sbjct: 117 ---PAADGTITVD--GHSTAIRAGMTAQE-----VATAINTDRDAKVYAAATDDGT---- 162 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L ++S TG A + V+ D A G + ++A T++ V++ +S Sbjct: 163 LVLSSRATGDTGAGFIDVTSDGG-----AIAAKLDRGGARIERQGRDALYTLDGVSLRSS 217 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKA-----QTAIKDWVNAYNSLIDTFSS- 291 SN I D L +TL L VTT + +TI+ A + ++ +V AYN+ ID Sbjct: 218 SNVIRDGLAGVTLTLRGVTTASGPVTISVGAPGANVEAIRRKLEAFVEAYNATIDLIRGK 277 Query: 292 LTKYTAVDAG---------ADSQSSSN---GALLGDSTLRTIQTQLKSMLSNTVS--SSS 337 L + T D AD ++++ G L GD L + + L+ + + VS + Sbjct: 278 LEERTVPDPRSQQDIKNGVADPRTTAQKKAGTLFGDRQLAGMLSDLRQGIYSPVSGLPTG 337 Query: 338 YKTLAQIGITT---------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 +L+ IGI+T D G+L +D D+LT AL +D +GV L+ G G Sbjct: 338 MDSLSSIGISTGAFSASTSRDTLAGRLTIDTDRLTKALTEDPTGVRNLLQGVNNTDGWAR 397 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 L + G++ DG L L + R+ + QFT L+V ++ Sbjct: 398 RFEGLLNDRTKSDGMLDNRIDGADDELRMLRRQMEQMDVRLALREKNLNAQFTALEVAIS 457 Query: 449 SLNSTSSYLTQQFENNSN 466 + +L+ Q +N Sbjct: 458 RARTQGDWLSGQLAGLNN 475 >UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Campylobacter RepID=FLID_CAMJE Length = 642 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 114/421 (27%), Positives = 192/421 (45%), Gaps = 66/421 (15%) Query: 1 MASISSLGVGSGLDLSSILDSL-TAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 S+SSLG GSG+ +D L A QKA + P + + T K +K+ L +FQT Sbjct: 3 FGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQT 62 Query: 60 ANTALSKADLFSATSTTSSTT--AFSATTAGNAIAGK-YTISVTHLAQAQTLTTRTTRDD 116 A ++L+ A +F+ S + ++ T + +A + I+VT LAQ ++ +D Sbjct: 63 AVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLAND 122 Query: 117 TKTAIA----TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINV 171 A T+D LT G + +T+D N++ + D IN A G + A I+N Sbjct: 123 GGFVNAQLNGTAD--LTFFSNGKEYTVTVD---KNTTYRDLADKINEASGGEIVAKIVNT 177 Query: 172 GNG--EYRLSVTSNDTGLDNAMTLSVSGDDALQSFM--------------GYDASAS--- 212 G YRL++TS +TG D+A++ D+ + G D SAS Sbjct: 178 GEKGTPYRLTLTSKETGEDSAISFYAGKKDSNGKYQKDINAEKIFDDLGWGLDVSASIDP 237 Query: 213 ---SNGMEVSVA------AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLT 263 G + A AQNA+ T++ + + SSNT++D +TL LN TG Sbjct: 238 DKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLN--KTGEINFD 295 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQT 323 + QD A++D V+AYN L+ ++ T Y +S++ + G L G S + +I++ Sbjct: 296 VQQDFEGVTKAMQDLVDAYNDLVTNLNAATDY-------NSETGTKGTLQGISEVNSIRS 348 Query: 324 QLKSML--------------SNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKD 369 + + L N V++ ++ G++ + + G L D+ K +K+D Sbjct: 349 SILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDA-GTLSFDSSKFEQKVKED 407 Query: 370 A 370 Sbjct: 408 P 408 >UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4332 Length = 666 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 120/379 (31%), Positives = 207/379 (54%), Gaps = 32/379 (8%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK- 66 G+ +G+D ++D L + + +++Q+++ T K +A+ TL++ L Q+ AL++ Sbjct: 15 GLATGIDTQKVIDGLNKINQQRIDRLNSQKTALTTKQTAFVTLQAQLFDLQSKTNALARS 74 Query: 67 -ADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 F T+T+S +TA +A A+ G YT++V LA+ + + D TA+ T Sbjct: 75 AGSAFDGRTATSSDSTAATAVAGTAAVPGTYTVNVVKLARGAQVASAGFADP-NTALKTG 133 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII-NVGNGEYRLSVTSN 183 K+T+ T+ + + N++L G+ D+IN A V A+++ + G E +L VTS+ Sbjct: 134 TLKITVGS---GTTTTVTVGSQNNTLQGVADSINAAGGDVRATVVTDSGTSEAKLLVTSS 190 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGME-VSVAAQNAQLTVNNVAIENSS--NT 240 TG NA+++ SG L G D + G+ V AAQ+AQ+TV A+ SS N Sbjct: 191 KTGAANAISVDASG---LTGGSGQD--LFTGGVPTVLQAAQDAQVTVGGGALSVSSPTNQ 245 Query: 241 ISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 I++ + ++LNL + G QT+T++ DTS A A++D+V +YN++ D +S T+Y Sbjct: 246 INNVIAGVSLNL--LKEG-QTVTVSVAADTSGAVKAVQDFVTSYNAVKDLIASQTQY--- 299 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDGKLE 356 +S++ + G LLG+ + + L S L++ V + S L+ G++ + S GKL Sbjct: 300 ----NSETQTAGTLLGNRDVTALSDALASALTDAVPGLTGSTNRLSVAGLSFNDS-GKLV 354 Query: 357 LDADKLTAALKKDASGVGA 375 D+ KLT+AL D SG A Sbjct: 355 FDSSKLTSAL-NDPSGTAA 372 >UniRef50_D0XTV9 Flagellar hook-associated 2 domain protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XTV9_9CAUL Length = 563 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 58/382 (15%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-- 65 G SGLD S++++ A + A + + ++ T K+S+Y TL+S L ++ ++L Sbjct: 18 GTISGLDTDSLIEAAVAQKTARADTLDAKVTANTTKISSYQTLQSLLDDITSSMSSLKST 77 Query: 66 ---------------KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 K +A+ + +T + + +A+A YT++V+ LA+A Sbjct: 78 TYSSLSTSTGNAFDDKTAYLTASDGSDATDIIAVSAESDAVAASYTVTVSQLAKAM---- 133 Query: 111 RTTRDDTKTAIATSDSKLTIQQGGD-------KDPITIDISAANSSLSGIRDAINNAK-- 161 K A + DS + QGGD P TI +++ + +LS + +AIN Sbjct: 134 -------KVASDSLDSSTALGQGGDFTIGVAGGTPATIAVTS-DMTLSDLAEAINEQSDT 185 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GVSA+++ V G Y+L +++ DT +D A++ SG + + +G S + V A Sbjct: 186 TGVSATLLKVSAGAYKLVLSAADTNVDIALS-DTSG---VAAAIGL-VDDSGDFTNVLQA 240 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLT--ITQDTSKAQTAIKDWV 279 AQ A T++ V I + SN ++D + + ++L +TT +QT+T + D + +TAI D++ Sbjct: 241 AQPAIATIDGVTITSDSNQLTDTIPGLAISLLQITTTDQTVTLDVEADYADIKTAITDFI 300 Query: 280 NAYNSL---IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS- 335 +AYN+L +DT S+++ AD + + L DS LR + QL + LS S Sbjct: 301 DAYNALRDFLDTNSAVS--------ADGTVAEDAVLFADSLLRGVTKQLSATLSTKAGSD 352 Query: 336 SSYKTLAQIGITTDPSDGKLEL 357 + +LA +G+T +D KLEL Sbjct: 353 ADANSLAALGVTL-TADNKLEL 373 >UniRef50_D1B250 Flagellar hook-associated 2 domain protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B250_SULD5 Length = 554 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 107/351 (30%), Positives = 177/351 (50%), Gaps = 33/351 (9%) Query: 18 ILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTT 76 ++D L K A +TPI + +S + K + TL S +T + + +ALS + +TT Sbjct: 21 VIDQLKEVDKTAQITPIDTKITSNSTKQTDLSTLTSLASTLKASTSALSDEISYLQRTTT 80 Query: 77 SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDK 136 S A S + G + I+V+ LAQ Q + T + A+++ ++I+ G Sbjct: 81 VSNDAISVSVDGGTNIQDFKINVSQLAQ-QDIYQSNAYAATTSTFASAEDTISIEFDG-- 137 Query: 137 DPITIDISAANS-SLSGIRDAINNAKAG-VSASIINV-GNGEYRLSVTSNDTGLDNAMTL 193 T D S +++ +LS + D IN+ G V+AS++NV G+ Y+L + S++ G DNA+T Sbjct: 138 --TTYDFSVSSATTLSDLTDMINDKMDGKVTASLLNVGGSNPYKLVLKSDEMGADNAIT- 194 Query: 194 SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLN 253 +Q+ DA +N + A++AQ T N V+I SSNTI D + +TL LN Sbjct: 195 -------IQAGTAADALGLTNIQQ----AKDAQFTYNGVSITRSSNTIDDLMVGVTLTLN 243 Query: 254 DV--TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGA 311 + +T + ++ITQD S + + + V+AYN+L+ +S T Y DS + + G Sbjct: 244 EAQESTESTQVSITQDWSDVKEQLNNLVSAYNNLMSNLTSATSY-------DSSTETAGV 296 Query: 312 LLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKL 362 G + L T+ L+ L ++L GI+ + S G LE D D Sbjct: 297 FQGVTQLTTLSASLRKDL--LALDEEGRSLMDYGISLNSS-GSLEFDEDTF 344 >UniRef50_D1U369 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U369_9DELT Length = 569 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 117/403 (29%), Positives = 183/403 (45%), Gaps = 63/403 (15%) Query: 8 GVGSGLDLSSILDSLTAAQ--KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G+G+G D I+++ + + + +++ + L L+ T QT + L Sbjct: 27 GLGNGTDFEEIIEATISGESYRKEAYEADKEETEYIIDL-----LEQLDTELQTLSETLE 81 Query: 66 KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD 125 F S AT G A G +T+ V +AQ T A+SD Sbjct: 82 DMGSFLVQDAVCSGDGVEATITGEAATGSHTVIVGQVAQGDVWAF------TDLGYASSD 135 Query: 126 SKLTIQQGGDK-----DPITIDISAANSSLSGIRDAINN---AKAGVSASIINVGNGEYR 177 +T + + I+IDI AA ++L G+ +N+ A+ V+AS++N G+ Y Sbjct: 136 ETVTTTATTLELTYAGETISIDI-AAGTTLDGLVSTVNSSASARDKVTASLVNDGS-NYY 193 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA---- 233 +T DTG DNA+T++ +GD G+DAS +N + A NA+L V+ Sbjct: 194 FVLTGADTGADNAVTVADTGD-----LTGWDASGFTN----TQTACNARLKVDGFPTGAD 244 Query: 234 --IENSSNTISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTF 289 I+ S+NTI D + +TL L D TTG+ L IT DT ++D+V A N +I T Sbjct: 245 SWIQRSTNTIDDVITGMTLELTD-TTGDDGLRITVGVDTDAIVEQVEDFVTAMNEIIYTM 303 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----------SSSSYK 339 LT D DS + N A + + +Q+K+ LS+ V Y Sbjct: 304 QVLTGRVEGDD-EDSYTVDNYA------MDLMYSQIKNTLSSGVLGFARYTEEDGGDVYN 356 Query: 340 TLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALI 377 L+QIGI+T+ + G+L LD D+L+ AL D V +L Sbjct: 357 ALSQIGISTNDDEGSDSFGQLLLDTDELSEALANDPKAVASLF 399 >UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWJ0_9BACT Length = 484 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 119/474 (25%), Positives = 206/474 (43%), Gaps = 54/474 (11%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF-QTANTALSKADLF 70 GLD ++++ A L + Q+ AK + + ++ L F ++A + D Sbjct: 34 GLDTEKLVNANLEAAAIPLEQMQQHQADLDAKSAIWRQVQQKLDGFLKSAGNLHLRQDFS 93 Query: 71 SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI-------AT 123 + S +AF+ T A G Y++SV+ LA+ L + D KT++ A Sbjct: 94 AFKSIVPPHSAFTVTPGPGASLGSYSVSVSSLARPGVLVSSGVADKDKTSVLNIPPDGAF 153 Query: 124 SDSKLTI-----QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG--NGEY 176 S + LT GG + ID S +L + AIN+A G+ A ++ G Y Sbjct: 154 SHATLTFLIGDHLVGGKIRSVRIDQSTG-FTLESLAGAINDAHIGIHAMVMRTGAPGAPY 212 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 LS++S G+ N + G D + A A LTVN V +++ Sbjct: 213 SLSLSSTKNGM-NFRVMEQEGLDFT--------------FKTVQKASLAHLTVNGVPVQS 257 Query: 237 SSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SN ++DA+ ++L TTG T +I +T +T + +V +YNSL+D L K Sbjct: 258 ESNDVADAIPGSVIHLRQ-TTGPTPTTASIVHNTKTIKTNVGAFVKSYNSLLDF---LDK 313 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS---SYKTLAQIGITTDPS 351 T V+ + G LLG ++ ++ +L ++L+ + ++TLA +GIT Sbjct: 314 ETRVNPA----TGQGGPLLGAYSVVDLRNRLGTVLTRPLPEKVQGKFRTLADVGITFQ-R 368 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-----TGIIKA 406 +G L D+ K AL + V L+ G G GI + L + + G I Sbjct: 369 NGHLSFDSGKFDKALASNYDDVVHLMTGQGATPGIVAGVHDLLMEFANPASGPLAGEISD 428 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 D + ++T+ + ++ D + +E+++ L L+ LN +Y+ QQ Sbjct: 429 INDQERTNVREMTRKQDELANLKD----QLEEKYSGLQGLLGGLNQKQAYVQQQ 478 >UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=B9D404_WOLRE Length = 577 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 108/399 (27%), Positives = 194/399 (48%), Gaps = 41/399 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + +SSLG GS + +++ L AA +A + P++N+ ++ K LK+ + TF++ Sbjct: 3 LGKVSSLGFGSQVLTQDVINKLKAADEAGQIKPVTNKIAANATKQKDLTALKTLIGTFRS 62 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +AL+ + +T+S + + + I V LA+ ++T+ T + Sbjct: 63 SVSALADDSSYQKRTTSSDGKSADISVSPGVAVQNIDIDVKQLAKKDVY--QSTKFGTSS 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGNGE--Y 176 + + I+ G I + S ++L + D IN G VSA + VG GE Y Sbjct: 121 SFIGKNGTFGIKVGNQTYKIEVKSS---TTLEELADKINEVTNGAVSARAMKVG-GEDPY 176 Query: 177 RLSVTSNDTGLDNAMTL--------SVSG-DDALQSFMGYDASASSNGMEVSVAAQNAQL 227 +L + S +TG DN + + +++G DD LQ +G+D++ +N ++S A Q+A+ Sbjct: 177 QLILQSKETGADNKIEITNVDNDGNALNGADDVLQK-LGWDSANIANN-KISTA-QDAEF 233 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 N + I+ S N I D +T+ L D TG T ++ +DTS + ++K V AYN+L++ Sbjct: 234 VYNGITIKRSGNEIKDLNLGMTIKLKD--TGKTTFSVKEDTSAIKESMKSMVTAYNNLVN 291 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-------SNTVSSSSYKT 340 T Y DS + +G G + TI++ L +L + V+ ++ Sbjct: 292 NLKVATDY-------DSDTKKSGTFQGVGEINTIKSTLNKILFGNQTYTKDNVTKTA--N 342 Query: 341 LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 LA G++ + +G LELD+ KL L +D V + G Sbjct: 343 LADYGLSLN-KEGLLELDSSKLGKKLDEDLQSVQKIFAG 380 >UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UA93_9DELT Length = 570 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 111/402 (27%), Positives = 185/402 (46%), Gaps = 58/402 (14%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYG-------TLKSAL 54 SI+ G+GSG D + ++D L ++ +T + +SS+ +K + +LK+ L Sbjct: 9 GSINFTGLGSGTDFNKLIDGLIDVERTRITRLETWKSSWKSKNDQFASLNTQMLSLKTTL 68 Query: 55 TTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR 114 F T N L K T T+S T +A+ A+ +I + LA T + Sbjct: 69 EDFDTINEFLKK------TVTSSDTARLTASAESTAMEANTSIEIGQLAANDVHITASGT 122 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINV 171 KTAI +S++ T G TI+ A ++L G + +NN ++ + AS + Sbjct: 123 SSLKTAITSSNTSFTFSYAGKS--YTINDIPAGTTLEGFVNLVNNHPDSRNLIRASTVYD 180 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 G+ Y L ++ G N + +S DD F G D S A NAQ+ VN Sbjct: 181 GS-VYHLQLSGMGQGSKNQLVIS---DDGGLIFGGSDFLQSQE-------AVNAQIRVNG 229 Query: 232 VA------IENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAIKDWVNAYNS 284 IE SSNTI+D LE +TLNL + G LT D S + +K +V+A N+ Sbjct: 230 FPSAGGGWIERSSNTINDVLEGVTLNLREAEVGKTIKLTTATDASGIKDTVKKFVDAVNT 289 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALL-GDSTLRTIQTQLKSML-----------SNT 332 + + + K T+V+ D + G+LL G+ + I ++K++ ++T Sbjct: 290 V---RAQIIKITSVE--EDDSGKATGSLLTGNYGVDMIAQKIKNITAEMGLGFTPWDADT 344 Query: 333 VSSSSYKTLAQIGITTD-----PSDGKLELDADKLTAALKKD 369 ++ L+Q+GI TD P+ G L++D + A+K++ Sbjct: 345 MTGDRLSALSQLGIMTDAEQGSPTYGLLKIDEEVFDKAMKEN 386 >UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A70B9 Length = 418 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 111/431 (25%), Positives = 183/431 (42%), Gaps = 44/431 (10%) Query: 50 LKSALTTFQTANTALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTL 108 L AL F+ AN L K + S S A + AT A NA G Y V LA A Sbjct: 18 LDDALKAFRKANEELVKGGSVTRNSVWLSNDAIAKATAAPNAKPGAYDFYVRQLATANQR 77 Query: 109 TTRTTRDDTKTAIATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 KT A S ++ I+ G T+ +++G R+ Sbjct: 78 VVNLPAS-IKTGGAGSFEITLNDGTKCRVDIEALGKDGKETLTPEELARAINGNRELDGK 136 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSG---DDALQSFMGYDASASSNGM 216 +A V + +L +TS +TG N T+ SG D Q+F ++ + Sbjct: 137 VRAEVVSG---------KLVLTSAETGEQNGFTIDASGLNDPDLKQAFESAKETSKAQDA 187 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 + + +N V I+ SN + +++E +T+ N TG T+ ++ D + ++ Sbjct: 188 IILLGGENG------VEIKQPSNVL-NSIEGLTITFN--KTGAVTVKVSADKEETVKGVR 238 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 +V+AYN+L+D F LT+ AG + + + G L D+ +R + +Q+K+ L ++ Sbjct: 239 AFVDAYNALMDEFEKLTR-----AGNEKNNEAGGPLEADAGVRALISQIKNTLRKSMDGV 293 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 L ++GI TD G+L ++ L A+K L K TG+ + L + Sbjct: 294 R---LHELGIETD-RKGRLSINESALDKAMKDSPEKFDKLF--GNKSTGLAGNFDALLDT 347 Query: 397 WL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 WL ++ G +K + V +L + R D +Y +QFT L L +LNST Sbjct: 348 WLDASKGQMKKRMESVEHNEKRLDAQTDDLKRRYDQVYNQYVKQFTALQALQANLNSTLK 407 Query: 456 YLTQQFENNSN 466 L F +N Sbjct: 408 RLDDLFSTKNN 418 >UniRef50_A5V2R8 Flagellar hook-associated 2 domain protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2R8_SPHWW Length = 543 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 114/387 (29%), Positives = 203/387 (52%), Gaps = 36/387 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYG-TLKSALTTFQTAN 61 +++LG S +D SS++D L A A T +++++++ TAK+S + S T + + Sbjct: 10 LTALGASS-IDTSSLVDQLATAAIANKTKALTDRETANTAKISDLANAVNSITTFSSSLS 68 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAG-KYTISVTHLAQAQTLTTRTTRDDTKTA 120 + +S LF+ ++++S+ + AG+ ++G TI V +A AQTLT + Sbjct: 69 SLISGGSLFTQPTSSNSSIVNVSAVAGSRLSGLSSTIKVERIASAQTLTA-AALPGAASP 127 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 + +LT+ GDK TI I++AN+SL+G+ AI ++ GV+ASI+ G RL V Sbjct: 128 VGLGTMELTV---GDKTK-TITITSANNSLAGLAQAIKDSGLGVTASIVTDSTGA-RL-V 181 Query: 181 TSNDTGLDNAMTLSV-SGDDALQSFMGYDASA----SSNGMEVSVAAQNAQLTVNNVAIE 235 TG NA +L V SG +D + + G+ + AQ+AQ+ V+ V + Sbjct: 182 VKGATGEANAFSLKVTSGTTGELDRFAFDPATYDPDAVTGLTLQQQAQDAQIVVDGVTVN 241 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTI--TQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +SN+ SD + + ++L + G T++I +Q + A+ D+V AYN + T +++T Sbjct: 242 KASNSFSDVIPGVKIDLVSASPGT-TVSIGSSQPVDSIKQAVSDFVAAYNEMKATLTAMT 300 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIGITTDP 350 + G+L D+ +R + T+L + S + S S TLA+IG++T+ Sbjct: 301 -------------GTEGSLRSDAGIRALVTKLGGLTSTRLTYASDGSPTTLAEIGVSTN- 346 Query: 351 SDGKLELDADKLTAALKKDASGVGALI 377 DG L LD+ KL++ + + + V A+ Sbjct: 347 RDGTLSLDSAKLSSVMASNPAAVEAMF 373 >UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZA7_SALRD Length = 494 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 23/323 (7%) Query: 151 SGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF-MGYDA 209 S + D +A SAS+IN +G RLS+ S TG ++ S S ++ L + D Sbjct: 182 SAVDDGTLSADQRPSASVINPTSGTARLSLRSQQTGYQGRLSFSDSSNNLLSELQVNADQ 241 Query: 210 SAS-SNGMEVSVAAQN-------AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT 261 A + G E++ + ++ +N + +SN ++DA++ +T+NL + + Sbjct: 242 IADDTQGGEITEVGTDEASSKLTSEFELNGLTFTRNSNEVTDAVDGVTMNLEEANGTASS 301 Query: 262 LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTI 321 +T D AQ+ +K++V+ N +I TF L + T V+ ++ G L DST R + Sbjct: 302 FEVTADEEGAQSVVKNFVDRVNEVI-TF--LNEKTNVNP----ENGERGELADDSTFRRL 354 Query: 322 QTQLKSMLSNTVS--SSSYKTLAQIGITTDPSDGKLEL-DADKLTAALKKDASGVGALIV 378 QL++ + V TLA IGI + DG L+L D D L A++++ + L Sbjct: 355 SRQLRTDATRPVEGQPEGLNTLADIGIEAN-RDGTLKLTDEDALRTAVRENQGALKDLFA 413 Query: 379 GDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKE 438 G G+ T + + + T G++ + D + +++++ N +R+ + + +E Sbjct: 414 G---PDGVATRMKERVDQYADTGGLLDSRQDSIDSSIDRIDDRINGLDERLQRREQQLRE 470 Query: 439 QFTQLDVLMTSLNSTSSYLTQQF 461 Q+ +++ + SL S ++Q+ Sbjct: 471 QYAEVESTIRSLASQQQSISQRL 493 >UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SEQ5_NOCSJ Length = 443 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 131/473 (27%), Positives = 220/473 (46%), Gaps = 50/473 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ S G+ SGLD +SI++ L + + +QQ+ + A L + + Sbjct: 1 MATSSISGLASGLDTASIINQLMQLEAVPQNKLRDQQTVENNVIRALRQLNTDAALLASN 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQ-AQT-LTTRTTRDDTK 118 L+K + + TS+++ +A+ +A +T+ V +A+ AQT + D Sbjct: 61 AAKLAKPEAWQTLKATSTSSTVTASATASASPSSFTVVVGQVAKSAQTSYSADVALDANV 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 +A LT G T I+A +L+ + IN AKAGV+A+ + G YRL Sbjct: 121 LTVAGDPVVLTAADG-----TTHTINAGTGTLTDLAAGINAAKAGVTATTVRTGTNTYRL 175 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +T++ TG +A++L S S G + Q+AQLT+ + + + Sbjct: 176 LLTADTTGAGSAISL----------------SNVSLGTATTDLGQDAQLTIGGIPASSKT 219 Query: 239 NTISDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 NT +D + +++ L T TI+ QD+S ++++K V+ NSL+ T Sbjct: 220 NTFTDLVPGVSVTLASTAKNGDTSTISVAQDSSSVKSSVKALVDQVNSLL---------T 270 Query: 297 AVD--AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 ++D + +++ G L GDST R+ L+S L NTV +LAQ GI TD GK Sbjct: 271 SIDTQTATKTSTTAAGILAGDSTARS----LRSALLNTVFGDGTTSLAQYGIQTD-RYGK 325 Query: 355 LELDADKLTAALKKDASGVGALIVG------DGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 L DADK A D +GV A DG + + + S+ TG I +A Sbjct: 326 LVFDADKFATAYAADPAGVAAKFTSATPPATDGWAARVDSVAKAATDSY---TGTITSAI 382 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G + T+++LTK DR++ + A + +T L+ +++L S ++L Q Sbjct: 383 TGHTTTVDRLTKSIADWDDRLEIRRASLQRTYTALETALSNLQSQGNWLAGQI 435 >UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1D6_DESAS Length = 504 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 126/513 (24%), Positives = 234/513 (45%), Gaps = 79/513 (15%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-K 66 G+ SG+D+ S++ L A++ L ++ ++ + + Y T+ S L + + A + + Sbjct: 9 GLASGMDIDSMVKQLMKAERMRLDTLTQKKQTLEWQQEDYRTVNSLLRSLRDATFNMKLQ 68 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA-IATSD 125 S +T+++ + TT +A+ G Y +SV+ LA+ LT D + A Sbjct: 69 GTFLSRQATSNNESVVKVTTGTSAVDGTYEVSVSQLAKGAYLTG----DKINSGNTANLK 124 Query: 126 SKLTIQQGGDK-----DP------ITIDISAANSSL------SGIRDAINNAKAGVSASI 168 S+L + +GG+K P IT+D A + SG+ D+ N GV AS Sbjct: 125 SQLNLTEGGEKTLVINGPNGTKKTITVDTDTAKMADLVAEINSGLDDSGNT--WGVRASY 182 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 V + RL + + DTG D T++V + Q+ ++G + QNA Sbjct: 183 DAVND---RLFLMTKDTGADQ--TIAVEEGELAQAL------KLTSGNFAYSSGQNANYK 231 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQ-------TLTITQDTSKAQTAIKDWVNA 281 +N V +E ++NT++ + +TL++ V+ + T+T++++T AIK++V+ Sbjct: 232 LNGVDLEAATNTVT--INGLTLDIKGVSAKDSGGDPTPTTVTVSRNTDAVYNAIKEFVDK 289 Query: 282 YNSLIDTFSSLT---KYTAVDAGADSQSSS--------------NGALLGD----STLRT 320 YN I+ + +YT D+ S +G L D S+L Sbjct: 290 YNETIEKVNKEYYEDRYTDYRPLTDTMRESLSDDQEEKWEEKARSGMLRFDSLLGSSLSK 349 Query: 321 IQTQLKSMLSNTVSSSSYKTLAQIGITTD--PSDGKLELDADKLTAALKKDASGVGALIV 378 ++ L S + N S+ +Y L +IGITT +GKL + KL A++KD GV L Sbjct: 350 FRSTLNSAVDNVSSTENYNNLTKIGITTGSYQDNGKLIISEKKLKEAIQKDPDGVMDLFT 409 Query: 379 GDG---KKTGITTTIGSNLTSWLSTTGIIKAATDG-------VSKTLNKLTKDYNAASDR 428 G K+ G+ + ++T+ + + I KA + V K + ++ D Sbjct: 410 KSGDTYKEKGLAGRLYDDITNAMDSV-IAKAGSSDSLVDDSVVGKQIKDVSNRITTMEDH 468 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ RY ++F+ ++ ++ L+ S+++TQ Sbjct: 469 LEDIEDRYYKKFSVMEEALSKLSQQSAWITQML 501 >UniRef50_A4U4K6 Flagellar hook-associated protein 2 (FliD, filament cap protein) n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K6_9PROT Length = 553 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 50/339 (14%) Query: 43 KLSAYGTLKSALTTFQTANTAL--------SKADLF-------SATSTTSSTTAFSATTA 87 K++AY +++ L Q + AL + D+F ++ ++TS+ T S T Sbjct: 56 KIAAYEEMQTLLLAMQDSLQALRADPSSSGQEDDVFLNRTGYLTSGTSTSADTLLSVTVE 115 Query: 88 GNAIAGKYTISVTHLAQAQTL--TTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISA 145 G + I + +A+A+ L +++++R D +D + GG +T D+S Sbjct: 116 DGTELGSHEIEIIQVAKAERLGGSSQSSRSDA------ADMAGSFTLGGTAFTVTADMS- 168 Query: 146 ANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQS 203 L I D IN G+ AS+I V + EY + +T+ +T + +TL+ + LQ Sbjct: 169 ----LDDIVDTINTETTNTGIKASVIKVSDTEYMMVLTATETNAE--ITLADTSGTVLQD 222 Query: 204 FMGYDASASSNGMEVSV--AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT 261 D NG + + AAQ AQ+ ++ V IE +N I DA++ ITL L +GN T Sbjct: 223 LGLVD----ENGDKADILQAAQPAQVKIDGVTIERDTNEIDDAIDGITLTLYKAESGN-T 277 Query: 262 LTITQDTSKA--QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 LT+ D S + +T ++ V YN+L D F L + TA D AD + L GDS LR Sbjct: 278 LTLEVDNSLSDIKTQVESLVETYNALRD-FVLLNQTTASDGSAD----ESAVLFGDSILR 332 Query: 320 TIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 T+ TQL+ L+ + +S LA +G++ D + LE+D Sbjct: 333 TVSTQLQEALTAAIDEAS---LASLGLSFDEQN-YLEID 367 >UniRef50_B8DS30 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS30_DESVM Length = 579 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 115/420 (27%), Positives = 189/420 (45%), Gaps = 55/420 (13%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTT-FQTA 60 SI+ G+ +G D I+++ A ++ + + Q+S+ AKL+A L++ +TT +QT Sbjct: 7 GSITFTGLNTGTDWDEIIEAQMAVEEYRYNAMLSAQTSYEAKLAAVQDLETQMTTLYQTL 66 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 S +D + +T+S T + T +A +T+ V LA+ ++ T T Sbjct: 67 QDYSSVSDFLAKAATSSDETCVTVTADNDAKESSHTVVVNQLARNDIWSSDDGYAATGTV 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG---VSASIINVGNGEYR 177 I +D + G T+D+ ++LS IN A V ASIIN GN Y Sbjct: 127 ITDTDQTFSFTYG--DMTYTLDVPGG-TTLSEFASLINGASGNNDDVRASIINEGNA-YH 182 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA---- 233 L + D G DN +T+ +G DA MG DA ++ AQNAQ+ V+ Sbjct: 183 LQIRGMDLGADNTVTIEDTGFDA----MGPDAFTNTQ------KAQNAQIKVDGFPAAAD 232 Query: 234 --IENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 +E S+NTI D ++ +TL L T + + + D A++ V + N+++ Sbjct: 233 EWMERSANTIDDVIDGVTLQLKKATGSDGVNINVALDADAMVGAVETVVGSINTVLQLLM 292 Query: 291 SL--------------TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 L + + A+ S+S L + ++ +Q+ LKS+LS Sbjct: 293 DLRSQGTVSSSVSTSTASDSDDEDDAEDDSASASVLASNYGVKLVQSTLKSILSTKGLGF 352 Query: 337 SYK-----------TLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD 380 SY +L+ IGI+TD + G L +D D L AA+KKD + V L+ D Sbjct: 353 SYYDSASETGDLFTSLSTIGISTDADEDSETFGLLVIDYDDLEAAIKKDPNAVAELLSAD 412 >UniRef50_Q5E3P1 Flagellar hook-associated protein 2, FliD n=4 Tax=Aliivibrio RepID=Q5E3P1_VIBF1 Length = 656 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+S +G+G GLD++S++ + +++ I ++S +S YG L+ +L T + Sbjct: 2 SVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNLM 61 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 T + D F S T ++S SAT + +A+AG+YTI V LAQAQ L + RDD K Sbjct: 62 TTFRQDDTFASRTISSSDEDVVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKFG 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYRL 178 KL I G K TID+ N+ ++ I IN+A GV ASI+ +G RL Sbjct: 122 ----PGKLEISLG--KKSFTIDVVGQNNKITDILKQINSAPSNPGVQASIVK-DDGGSRL 174 Query: 179 SVTSNDTGLDNAMTLSV 195 + S+ G N + + V Sbjct: 175 ILASDKPGESNKVKIEV 191 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 17/197 (8%) Query: 215 GMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVT---TGNQTLTITQDTSK 270 G++ +A +A++ ++ VA I + +N I DA++ + + L T + L + D Sbjct: 414 GLQEVQSASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDT 473 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 + AI+ +VN YN +T +L+ G D + +G L GDS +R+ +++LKS+ Sbjct: 474 VKAAIEQFVNTYNQFYETTKALS-------GFDPATGQSGPLAGDSVVRSAESRLKSVFV 526 Query: 331 NTVSSSS--YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 V S+ KTL ++GI+T G LE++ L L ++ S + G G Sbjct: 527 APVESAPTGIKTLIELGISTT-RQGTLEINQSMLDRQLNENFSQLHTFF---GGSKGFAK 582 Query: 389 TIGSNLTSWLSTTGIIK 405 + + S +G I+ Sbjct: 583 KVEDVIQSMTGVSGPIR 599 >UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F276_9PROT Length = 785 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 109/407 (26%), Positives = 209/407 (51%), Gaps = 39/407 (9%) Query: 3 SISSL--GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 SI+SL G +G D +D L +K ++ + +Q + TA+ A + +A++ ++ Sbjct: 6 SIASLISGQVAGFDAQGAVDGLLGVRKFEISQLQKKQDTITARQDALLQINNAVSGLRS- 64 Query: 61 NTALSKAD---LFSATSTTSSTTAFSATTAGNAI-------AGKYTISVTHLAQAQTLTT 110 TA+ AD F T++ +S+++ + ++ + AG++ I V+ +AQA+ +++ Sbjct: 65 -TAIGMADSTAFFGYTASLASSSSAVSASSLLDVSGTSGVSAGQHNIIVSQVAQAERISS 123 Query: 111 RT-TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-----AKAGV 164 +D T TA+A++ + + + T+ +S ++S L+ I IN + GV Sbjct: 124 SVAVKDSTGTAVASASTVMNLSGSFQLAGSTVTVSPSDS-LNDIAANINQLNTGASATGV 182 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF--MGYDASASSNGMEVSVAA 222 SAS++ VG ++RL + S+ TG TLS + DA + A+ +N + A Sbjct: 183 SASVMKVGTNDFRLILASDTTGA-TGFTLSGANLDAAGPLAALQLGATGQTNAYQSLQLA 241 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNL---NDVTTGNQTLTITQDTSKAQTAIKDWV 279 Q+AQ++++ +++ S+N I+DAL +TL+L + T + + I Q +A ++ +V Sbjct: 242 QDAQISIDGLSLTRSTNIITDALSGVTLSLKQADPAVTVSMNIGIDQQALRAN--VQSFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SSS 337 +AYNSL S K+ D +++++G L GD L TIQ+ L + L +V +S Sbjct: 300 DAYNSLQTMISDQFKF-------DPKTNTSGLLSGDPLLTTIQSNLSNSLFKSVPGLASD 352 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 +L IG+ D +G+L ++ ++ L D + + + V G T Sbjct: 353 RNSLVMIGVEPD-MNGQLMINENRFGTFLANDPTAIRDVFVAQGSST 398 >UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W111_9BACI Length = 513 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 134/520 (25%), Positives = 224/520 (43%), Gaps = 84/520 (16%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT--ANTALS 65 G +G+D++ ++ L A++ + + + ++ + T+ L TF+T + Sbjct: 5 GFATGMDINQMVTDLMRAERMPVDRMQQNKQLLEWRMEEFRTINRKLETFRTNIFDGVFR 64 Query: 66 KADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRT--------TRDD 116 A++ + T T+S + S T A NA G I SV+ LA+++ L + TR Sbjct: 65 SANMLAKTGTSSDESRVSVTAASNAQPGTMRINSVSSLAESEALVSEALTVSGETATRQT 124 Query: 117 TKTAI-ATSDSKLTIQ------QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 T + +SD + T++ G + T A+ + + IN++ G++A Sbjct: 125 TLADLTGSSDPEFTLEVTTRTSSGEKNETFTF---ASTDKVDDVLKKINSSDLGLNA-FF 180 Query: 170 NVGNGEYRLSVTSNDTGL-DNAMTLSVSGD-DALQSFMGYDASASS-----NGMEVSVAA 222 + G+ +S + +TGL D +L++ G DA +F D++ +S G VA Sbjct: 181 DTQTGQ--ISFSREETGLYDENGSLAMGGSADAQIAFA--DSTLASAFGVQEGQGTRVAG 236 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLND------VTTGNQTLTITQDTSKAQTAIK 276 NA + +N + E +NT ++ +T+ L D VT G+ T DT K I Sbjct: 237 SNAVVNINGIDTERGTNTFTE--NGLTITLRDTFSSDPVTIGSAT-----DTDKIFDTIM 289 Query: 277 DWVNAYNSLIDT------------FSSLTK-----YTAVDAGADSQSSSNGALLGDSTLR 319 D+VN YN L++ F LT + + + + +G L D LR Sbjct: 290 DFVNEYNELVEHVNEKLREDRNRDFRPLTDDQREALSEREIERWEEQAMSGMLRNDRILR 349 Query: 320 TIQTQLKSMLSNTVS---SSSYKTLAQIGITTD---PSDGKLELDADKLTAALKKDASGV 373 Q +S + VS SS+ LAQIGITT GKLE++ D+L A + +D V Sbjct: 350 GGFDQFRSAMYTPVSLGEGSSFNQLAQIGITTTNNFRDGGKLEVNEDRLRAKINEDPDAV 409 Query: 374 GALIVGDG---KKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK---LTKDYNAASD 427 L DG + G+ I + S + + I + A + LN L + + D Sbjct: 410 FRLFTADGSSQSEKGLARRIRESANSLIDS--IAREAGGSRGRNLNHQFTLGRGMDQIDD 467 Query: 428 RID------AQVA-RYKEQFTQLDVLMTSLNSTSSYLTQQ 460 RI QV RY QFT ++ + NS + L Q Sbjct: 468 RITNFERRLEQVEQRYWSQFTAMEKAVAQSNSQAESLFAQ 507 >UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ11_DESRD Length = 467 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 120/462 (25%), Positives = 216/462 (46%), Gaps = 39/462 (8%) Query: 1 MASISSLGVG---SGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 + S+S + +G SGL + + ++A Q+ +TPI+ + ++S + +L+S + + Sbjct: 3 LGSVSGVYLGGRPSGLPDNLVEQLVSARQQQKITPINQDINEVDDRISLFQSLESKVASL 62 Query: 58 Q-TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT----LTTRT 112 + T +D A ++S+ A S G +G YT+ V LAQA L T Sbjct: 63 EDTLGDLQDSSDFEEAKVSSSNDQALSVAQNGAPQSGSYTVEVDTLAQADVQLVGLDDGT 122 Query: 113 TRDDTKTAIA-TSDSKLT--IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 T T IA T+D+ L + D + T SL + D IN + AGV A Sbjct: 123 TTG-VDTGIADTTDASLVEDVTFEFDHNGSTHSFDTTGKSLQALADEINASDAGVQAYTA 181 Query: 170 NVG---NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 N+G + EY LS+ S+ G G D L S + + +S E S+A Q+A Sbjct: 182 NIGTQDDPEYALSLKSDTPG---------GGVDDLISNISGNLFGTSTTTENSMAGQDAA 232 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 +V+ V+ SSNTI D + +++ LN+ G ++ + +DT + + +V+A+N + Sbjct: 233 FSVDGVSYTRSSNTIEDVIPGVSMTLNENFAGQVSVGVEKDTEAIEKKVSAFVSAFNDVR 292 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT---VSSSSYKTLAQ 343 SS + Y+ D A G LLG S ++ + ++ ++ +S ++Y L + Sbjct: 293 SFISSKSSYSEDDDTA-------GGLLGSSLAGRLEMSMANLAIDSFAALSGNTYDRLPE 345 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTG 402 IG+ DG L LD+ K A++ + V +L DG G+ + S L + S G Sbjct: 346 IGVEL-QRDGTLALDSAKFQEAMETNGQDVASLFTEDG---GVADKMQSLLGGYTDSIDG 401 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 + + ++ +++L D A + I++ R +++T ++ Sbjct: 402 SLTYKLESLNNQMSRLEDDKQDAYNSIESYRDRLVDKYTAME 443 >UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEC9_VIBFU Length = 440 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 111/461 (24%), Positives = 217/461 (47%), Gaps = 55/461 (11%) Query: 19 LDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL---------SKADL 69 +D+ + A + + +S ++ + ++L + S L+ ++ ++L A Sbjct: 3 IDAASMASQMAIYDVSPAETRYNSRLKIFQNQSSMLSKITSSMSSLDSVIYKFTKPGASF 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 T++ SS + TT+GNA + + V LA + + T+ + + + + Sbjct: 63 VQNTTSLSSEDHVNVTTSGNASSVNMDLYVEQLASSHQVVVNTSAMNVNDEFSPATGSIE 122 Query: 130 IQQGGDKDPITIDISAANSSLSG------IRDAINNAKAG-VSASIINVGNGEYRLSVTS 182 +Q GG + ITI ++ A S+ G N G V+A+++ GN E ++ TS Sbjct: 123 VQHGG--ETITIQLADAESNGDGTVSYQEFISHFNRVMDGRVTATMVRSGN-EMKMLFTS 179 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAIENSS 238 N+TG DN +S S D L DA +++N + +A + + + V + NSS Sbjct: 180 NETGQDNQFQISASDDSGLS-----DAFSTANDNPIKTGT-DAIVWLGDYGSGVQLTNSS 233 Query: 239 NTISDALENITLNL---NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 NT + + + + L +++ +T+ D T +K++V AYN ++ + TK Sbjct: 234 NTFENIVNGVDVELKKAHEMGGIATNITVGPDADATMTLLKEFVTAYNDMMSVIAEATK- 292 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 + +SS G DS+ ++++ QLK ++ ++ + S L+++G++ D S GKL Sbjct: 293 ------SSGESSERGVFSTDSSFKSLEQQLKGLMRDSYNGVS---LSEVGLSLDKS-GKL 342 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 ELD DK A K + + + +G G+ TT+ ++ + T + +T+ Sbjct: 343 ELDEDKFREASK--SVDMEQVFRAEG---GLFTTLQKSVNDY---TDFADGSLTRKKETI 394 Query: 416 NKLTKDYNAASDRID--AQV--ARYKEQFTQLDVLMTSLNS 452 K N A D+++ QV +RY Q+T+L+ +M S++S Sbjct: 395 ELQQKRINEALDKLEDKYQVIYSRYLAQYTRLNSIMASMDS 435 >UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE2_ALKMQ Length = 558 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 140/568 (24%), Positives = 235/568 (41%), Gaps = 132/568 (23%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF---------- 57 G+ SG+D +++ L A++ + Q+ + + AY + + F Sbjct: 5 GIASGMDTEQMVNDLMRAERMRMDRFFQQEQTVKWRQEAYNDVNKTMANFILDTRKAFGL 64 Query: 58 -QTANTAL-----SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 T+NT +K+ + +T ++ +T NA++G + + V LA+ +++T Sbjct: 65 NTTSNTGSIQNHSAKSFDWVKQATGTNENIVKSTATANAMSGSHKVEVQQLAEVASVSTV 124 Query: 112 TTRDDTKTAIATSDSKLTIQQGGD-----KD-PITIDISAANSSLSGIRDAINNAKA--- 162 D K A DS IQ GG+ KD TI+I+ + ++S + INNA A Sbjct: 125 ----DLKEAAVVDDSGKFIQ-GGEITVTAKDGSKTIEITTS-MTMSDLVREINNATADAG 178 Query: 163 -------GVSAS---------IINVGNGEYR-LSVTSNDTGLDNAMTLSVSGDDALQSFM 205 G+ A+ I +GE + + VT ++ GL + M V DDA Sbjct: 179 DSEGKSLGLRAAYDSSLGQMMITTRESGEEQTIKVTYDEDGLSSKM-FKVKTDDADMPIP 237 Query: 206 GYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTIT 265 G +N E ++ NA++ N ++ ++N S + I L L V+ T+ + Sbjct: 238 G------TNPFE-DISGTNAKILFNGDKVDKATNNFS--IYGINLQLQSVSDIEVTINVD 288 Query: 266 QDTSKAQTAIKDWVNAYNSLIDT------------FSSLTK-----YTAVDAGADSQSSS 308 D I D+VN+YN L+DT F LTK T D A + S Sbjct: 289 TDVDGIFNQISDFVNSYNELLDTMNGATGEKHYRDFPPLTKEQKEGMTEKDIEAWEEKSK 348 Query: 309 NGALLGDSTL-RTIQTQLKSMLS----------NTVSSSSYKTLAQIGITTD--PSDGKL 355 +G L D L RT Q+ S+ N + S Y + Q+GITT S GKL Sbjct: 349 SGLLKNDEVLTRTSQSMRSSLYQDVNSGIDEDGNQIKLSGYSHITQVGITTGNYQSGGKL 408 Query: 356 ELDADKLTAALKKDASGVGALIV-----------GDGKK-----TGITTTIGSNLTSWLS 399 E++ +KL AA+ ++ GV L + KK TG+ I ++T+ + Sbjct: 409 EINEEKLRAAINENPEGVMDLFFKSPSPLPKDATAEQKKQHKSETGLVQRIYDDMTAGMK 468 Query: 400 TTGIIKAATDGVSKTL-------------------NKLTKDYNAASDRI--DAQV----- 433 +I+ + G +L ++L K+ + RI + Q+ Sbjct: 469 E--VIRHSGPGEDSSLYRNVQSNMLIDFVTEHSSISRLDKELTTVNQRIAREEQILARRE 526 Query: 434 ARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY +QFT ++ M+ +N S +L Q Sbjct: 527 ERYWQQFTAMEKAMSQMNQQSDWLMAQM 554 >UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 Tax=Sulfurihydrogenibium RepID=B2V9J0_SULSY Length = 434 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 118/473 (24%), Positives = 198/473 (41%), Gaps = 64/473 (13%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ +G D++SIL + A + + + QQ + K + ++S L Q++ +S Sbjct: 9 GLVNGFDMNSILQQIQAIKSQQILMLQGQQQQISDKKTVISNIQSILKNLQSSINNISDP 68 Query: 68 DLFSATSTTSSTTAF---SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 +A S S S T N G Y I+++ LA Q + + D ++ + Sbjct: 69 STVNAKSVNVSNPNVLTASITDPTNVSEGIYNINISQLATNQVYASNNSFSDKNASLGLN 128 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAG-VSASIINVG---NGEYR 177 LTI G+ I D + SL + D INN A +G ASIINVG N +Y+ Sbjct: 129 PGTLTISMNGNSYNINYDNT---DSLQSLADKINNTASANSGNFRASIINVGTSSNPKYK 185 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L ++ TG DN+ T+S +G+ + S G+ AQN TVN + +++ Sbjct: 186 LVISGTKTGADNSFTISDTGN-----------AVSVLGLTNIQNAQNGAATVNGLQVQSD 234 Query: 238 SNTISDALENIT-LNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 +NT + NI L+ TG+ L I +D ++ VN YN L+DT Sbjct: 235 TNTFT----NIPGLSFTAFQTGSTVLQIQKDNKPITDTLQAIVNYYNQLVDT-------- 282 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 + ++ G L G+ L I + S L ++ I D + G + Sbjct: 283 -----VNKETGKGGKLSGEYGLNQIVNGIFSQLQPLFTADI--------INFDRTSGHIS 329 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST----TGIIKAATDGVS 412 L+ KL AL + + D + T I +NLT++L+ GI+ Sbjct: 330 LNTSKLNDALTNNGA--------DLQNT--LNNIKNNLTTYLNPYTQFNGILDQYNKSYD 379 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + + + R+ ++ K QF Q+ +L +N S+ + F N S Sbjct: 380 SQIQNIQNLIDLQTKRVQIEIETLKNQFIQMQMLQAQMNDISARIQATFGNQS 432 >UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1R6_DESAD Length = 577 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 104/409 (25%), Positives = 179/409 (43%), Gaps = 52/409 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+ G+GSG D S++D L ++ + + + +SS++ K+ + L +AL QT Sbjct: 7 GNINFTGLGSGTDFQSLIDGLIKLERVHINRLESWKSSWSDKVEKFQELNTALLGLQTTL 66 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ D F S T TTS + +AT + A+ + I + LA T + + Sbjct: 67 KSMDTLDEFMSKTVTTSDSGTLTATASAEALVSSHAIEIGQLATNDIHVTDSGVSSLTES 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN---NAKAGVSASIINVGNGEYR 177 I +S + T G + IT+ +A +SL G + IN +++ + A+ IN G Y Sbjct: 127 IFSSTGEFTFTYG--SETITLSNISAGTSLQGFVNLINSHVDSREKIRATTINDGT-SYH 183 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA---- 233 L + D G DN +T+ D+ + + N + + A N+Q+ V+ Sbjct: 184 LQIYGLDLGADNQVTI----DNTVGMVF------TKNDFDETQNAVNSQIKVDGYPPAPG 233 Query: 234 --IENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 IE +NTISD ++ +TLNL + QT + I D + ++ +V+ N + Sbjct: 234 DWIERDTNTISDVIDGVTLNLKNTNAAGQTTAIGIVTDKEGMKENVQKFVDQNNEIRQMI 293 Query: 290 SSLTKYTAVDAGADSQSSSNGALL-GDSTLRTIQTQ---------------LKSMLSNTV 333 LT T S S+ G++L G+ + + Q + + + Sbjct: 294 KDLTSVTT------SSDSAKGSILTGNYGVELLVGQRMKDIIASKGIGFSWYEELPNGDF 347 Query: 334 SSSSYKTLAQIGITTDPSDGK-----LELDADKLTAALKKDASGVGALI 377 + Y L+Q+GI T+ G LELD +KL AL D V L Sbjct: 348 TGDRYSALSQLGILTNADSGGANMGLLELDTEKLNEALDADPMSVAMLF 396 >UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9N2_9ACTO Length = 469 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 130/495 (26%), Positives = 217/495 (43%), Gaps = 65/495 (13%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M S+S G+ SGLD +S++ L AA+ T + Q S+ AY + + + + A Sbjct: 1 MVSLSVDGLVSGLDTTSLVSQLVAAEALPQTRLKAQMSAAQKAADAYRAVNTKVDAVRAA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAG-KYTISVTHLAQA----QTLTTRTTRD 115 AL+ L +A + S+ + +A+ A+ G + + +V LA T T TT Sbjct: 61 AEALTADGLAAARTAKSTAASVTASATSTAVPGSRISFTVGSLASTASYLSTATWATTGT 120 Query: 116 DTKTAI-------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-AGVSAS 167 D + I S LTI + D P ID +++L+ IN+ + GV A+ Sbjct: 121 DVRKPIGPDATTPGPSPWPLTITR-PDGTPTPIDPPDQDATLAETIAYINDREDLGVRAT 179 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 +N GNG YRL +TS G + SA+ + V A++A L Sbjct: 180 AVNTGNG-YRLQLTSTTPGAKGYFDVQ---------------SAAGDLFTVVSPAKDATL 223 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 V VA+ + +NT +D + + + + + + + + + +D T +K V+A N+ + Sbjct: 224 DVGGVAVTSPTNTFADLMTGVAITVTEESDTSVVVEVGEDLKTVATKVKTLVDAVNAAL- 282 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-----SSSSYKTL- 341 T++ DS +SS L GD LR + ++L + +S+ V S+S+ T Sbjct: 283 --------TSIATNTDSGTSSTAVLKGDFALRQLASRLLTKVSDAVPGAVPSASTPGTYT 334 Query: 342 ----AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 A +G+ DGK+ D +++ D V L+ G G G L Sbjct: 335 AGSPAALGVQLT-RDGKVTFDEATFLKSMQSDPEAVHRLLGGAPASDGAPAVEG--LAQR 391 Query: 398 LSTTGIIKAATDGVSKTL-------NKLTKDYNAASDRIDAQVARYKE----QFTQLDVL 446 L+TT K AT + TL L KDY + D ++A KE QF+ ++ Sbjct: 392 LATTA--KDATKSTTGTLTLLAQGREALVKDYQSRIADWDLRLAARKEALTRQFSAMETA 449 Query: 447 MTSLNSTSSYLTQQF 461 ++SL + SS+L Q Sbjct: 450 LSSLKNQSSWLAGQL 464 >UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYT6_HALOH Length = 448 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 117/470 (24%), Positives = 224/470 (47%), Gaps = 48/470 (10%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+G+GLD + I+D + ++ + + QQ + LSA+G+++S L +F+ SK Sbjct: 7 GLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFK------SKV 60 Query: 68 D----LFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 D +F + T + T T +A G Y I +T LAQ+ + + D + Sbjct: 61 DDIESIFGKMAVTVNDTEVVDVTVDSSASLGTYNIEITQLAQSHAVASDAQDD------S 114 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSVT 181 TS+ L+ + IT++ + SL I++ IN + GV+A+II + L + Sbjct: 115 TSNLNLSGTFSINGTDITVN---TDDSLEDIKNLINQTSDTGVTANII-----DNTLVLK 166 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 SN+TG N++++S D Q +G + A+ AQ+A +++ ++I SSN I Sbjct: 167 SNETGTTNSISISDVSDSVAQQ-LGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNEI 225 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 +D ++ +T++L + T+ +D IK + +YNS T SS+T+ Sbjct: 226 NDVIQGVTISLKKGGGASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTE------- 278 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELDA 359 +G L GD TL I +L+ L++ +S+ L+ IGI +D G + ++ Sbjct: 279 ------KDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIESDRY-GNISVNE 331 Query: 360 DKLTAALKKDASGVGALIVG----DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +L+ AL+ V AL +G +G+ + + L+S L + G + + + + + Sbjct: 332 TELSDALENSFEDVKALFTATSSTEG-YSGLQERMSNYLSSILDSNGFVDGTKEMLQEQI 390 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + ++ + + + ++ F ++ + S+N+ S+L QF N S Sbjct: 391 DDINEEIQDLEYSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMS 440 >UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Listeria RepID=B8DI75_LISMH Length = 429 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 119/451 (26%), Positives = 211/451 (46%), Gaps = 59/451 (13%) Query: 13 LDLSSILDSLTAAQKATL----TPISNQQSSFTAKLSAYGTLKSALT----TFQTANTAL 64 +D + + QKA+L TP NQ SS+ +++ Y +LK+AL+ T + T Sbjct: 10 MDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLKTMSSFTTYE 69 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 SK L +T+S+ T+F+ ++ +++ G Y+I V +LA A T + K ++ Sbjct: 70 SKTKL----ATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKIGVSG- 124 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 TI+ G + I +D A+SS+ + + IN+ AG +I +G + VT+ Sbjct: 125 ----TIKINGKE--IKVD---ADSSMKNVMNTINS--AGAKVNIYTLGE---NMVVTAAT 170 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 TG++N+ + GD + +G ++ + +AA++A+L +N + +++N +++ Sbjct: 171 TGVENS--IKYEGDSTVLEALGLVQNSPDH-----LAAEDAKLRINGATVTSATNKVTNY 223 Query: 245 LENITLNLNDVTTGNQTLTITQDTS--KAQTAIKDWVNAYNSLIDTFSSLT-KYTAVDAG 301 + +T+NL TTG + LTI QD S KA + I +VN YN+L T + T K T + A Sbjct: 224 IPGVTINLKKETTGAEKLTI-QDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQAS 282 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADK 361 A L + L + K TL GI+ D +G L++D Sbjct: 283 A-------ADLEANRALNNVFQHKKDG----------NTLFDFGISVD-KEGVLKVDETA 324 Query: 362 LTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKD 421 + + +D S V G G GI + +L +TG I T ++ +NKL Sbjct: 325 MKKMVAEDPSAVERFFFGIG---GIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLK 381 Query: 422 YNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 + R D + +Q+ + +M ++ S Sbjct: 382 LTDITSRNDTLLTNITDQYNKWLEMMQAMQS 412 >UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGE2_RHOM4 Length = 500 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 204/459 (44%), Gaps = 69/459 (15%) Query: 25 AQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSA 84 A+KA + F +KLSA +L LT L++ F S T+S T F+ Sbjct: 36 AKKAEQERLKGVVKDFDSKLSALHSLLKTLTD------PLARP--FQGKSATTSATEFTV 87 Query: 85 TTAGNAIAGKYTISVTHLAQAQTLTTR---TTRDDTKTAIATSDSK---LTIQQGGDKDP 138 + +A G +T+ V LA A T ++ ++ ++ T+ ++ + + D DP Sbjct: 88 SAGDSAALGTHTLEVKRLASADTRISKQYTSSGSSLRSFFDTNGAQTFTIRVASPTDTDP 147 Query: 139 -----ITIDISAANSS----LSGIRDAINNA-KAGVSA-----------SIINVGNGEYR 177 I + ++ ++ L+ I AIN+A +A V A S+IN + R Sbjct: 148 NNRLDIQVTVNPTGTTDEEILNEIATAINDAFQAAVDAGTIKSDERAYASVINETSSTAR 207 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFM---GYDASASSNGMEVSVAAQ------NAQLT 228 LS+ S TG + SG L AS + G V N+Q Sbjct: 208 LSLRSGKTGFTYRLEFVDSGAGLLSELELSNNVVASGTGGGQVKYVGTSETDSELNSQFV 267 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 ++ + + +N ++DAL +TL L ++T TIT +++ + ++D++ YN ++ Sbjct: 268 LDGLTLYRDANRVTDALAGVTLELKQISTSPADFTITPNSNGIKAKVEDFIKKYNDVL-- 325 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIG 345 Y A + D ++ + G GD ++ L++ + VS + + +G Sbjct: 326 -----LYLAGKSNVDGETETRGDFAGDPVFSGLRFTLRNEVVRKVSGQPTEGPHYITDLG 380 Query: 346 ITTDPSDGKLEL-DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 IT + +DG L L DADKL A++++ V +L G GI T + +++ +++ T GII Sbjct: 381 ITIN-NDGTLTLSDADKLIQAVERNPQAVESLFSG---SDGIATRLLTHVETFVKTGGII 436 Query: 405 KAATDGVSKTLNKLTKDYNAASDRI---DAQVARYKEQF 440 D + ++ +L DRI + Q+AR +EQ Sbjct: 437 DQREDSLEASIRRL-------DDRIADFEEQLARREEQL 468 >UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6U7_BREBN Length = 503 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 210/508 (41%), Gaps = 68/508 (13%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANTALSK 66 G+ SG+D ++ + AQ+ + + + S K AY + + L Q T N Sbjct: 7 GMASGMDTEKMIKDMMKAQRQPVNRLEKSKISTEWKRDAYREMNTLLADLQKTVNDIRYS 66 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 A+ +++ + SA G Y+I V LA+++ + + D +I +S Sbjct: 67 ANFNKKVASSENDAIASAKVTGTPKLSSYSIEVQKLAKSEMPA--SMQFDIAASITSSK- 123 Query: 127 KLTIQQGGDKDPITIDISAANS-------SLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 QQ G ID AN+ ++ + IN + GV A ++ N S Sbjct: 124 ----QQLGASFEFAIDGDTANTIKVEATDTIDSVIAKINGSGKGVEA--FHIDNKLVIKS 177 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 + N+ G DN + V G S +G A+A+SN VA ++A + +N V + SN Sbjct: 178 INGNNLGGDNQFDIKVQG-GGDGSVLGMTAAATSNPSSTRVAGEDAVVVINGVKQTSKSN 236 Query: 240 TISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFS---SLTKY 295 + + + + TGN T+ D +IK +V YN++I+T + + KY Sbjct: 237 VFK--YDGVEFTVKTINTGNPLTINAKTDEEAVFNSIKGFVEKYNNVIETINKKITEPKY 294 Query: 296 TAVDAGADSQSSS--------------NGALLGD----STLRTIQTQLKSMLSNTVSSSS 337 D + + +G L+ D S L ++ + + L+ T +S+ Sbjct: 295 KGYQPLLDEEKEALGDKTAEKMDKMAMSGILIRDSYLTSALNEMRRSISAPLTGTGVNSA 354 Query: 338 YKTLAQIGITTDP-------SDGKLELDADKLTAALKKDASGVGALIVG---------DG 381 + TL++IGI P +GKL L+ +KL A+ + + V L Sbjct: 355 FDTLSEIGIGGPPTGKSAYQENGKLYLNEEKLRNAISNNGADVVKLFTSFSSSTDTGTKY 414 Query: 382 KKTGITTTIGSNLTSWLSTTGIIKAATDG--------VSKTLNKLTKDYNAASDRIDAQV 433 ++GI + SNL+ +S I K A G +SK + ++ D + DR+ Sbjct: 415 NESGIAERLYSNLSKAMSD--ITKQAGSGTVVNDDSYLSKKIGQMADDIKSWEDRLKIIE 472 Query: 434 ARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY +Q+ ++ M+ S S+ Q Sbjct: 473 NRYYKQYAAMETAMSKAQSQGSWFAQML 500 >UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Bacillus subtilis group RepID=FLID_BACSU Length = 498 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 121/500 (24%), Positives = 229/500 (45%), Gaps = 60/500 (12%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ---TANTAL 64 G+ SG+D+ I+ L ++A L ++ ++ + + +Y + S + Q + NT Sbjct: 7 GLASGMDIDDIVSKLMQTERAPLDKLTQKKQTLEWQRDSYREVNSKIKELQDYMSKNTLT 66 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + S T T+S+ + +AT + +A T+ V LA A T + + T Sbjct: 67 YPSTYQSKTVTSSNESVLTATGSVSAPNSSSTVEVASLATAATY-----KANNYTGYTQG 121 Query: 125 DSKL--TIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSASIINVGNG-EY--RL 178 D L + G+ T++IS ++ ++ + +N++ GVSA + NG EY + Sbjct: 122 DYNLAFNVVAPGETTAKTVNISVTSADTIDNVISKLNSSDLGVSAFKDKIWNGTEYVETI 181 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFM----GYDASASSNGMEVSVAAQNAQLTVNNVAI 234 + +S TG ++ + D A FM G+ A N + NA++T+N + Sbjct: 182 AFSSKATGAGGSIQ---AADSATADFMSGQLGFSLDAD-NKLTAYKEGTNAKVTINGFEM 237 Query: 235 ENSSNTISDALENITLNLNDVT--TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 E +N + + +T ++ + T TG T +++ D IK++V+ YN L+D+ + Sbjct: 238 EKLTNNFT--VNGVTYSIKNTTAATGPVTTSVSTDVDGIYNQIKEFVDKYNELVDSLNEK 295 Query: 293 TK------YTAV-----DAGAD------SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 K YT + +A +D + + +G L DS++ T Q+++ V++ Sbjct: 296 LKEEKYRDYTPLTSEQKEAMSDKEVELWEEKAKSGLLRNDSSISTGTNQMRTDFYTQVNA 355 Query: 336 --SSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVG---------DG 381 +Y+ L + GITT + G LE++ +KL A + +D GV L G Sbjct: 356 DGKTYQ-LTEFGITTSSAYQLRGHLEINEEKLKAKIAEDPQGVANLFTSGTNDSNYSDKG 414 Query: 382 KKTGITTTIGSNLTSWLSTTG--IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 IT T+ S + S + G + A++ + K LN ++ + DR++ RY + Sbjct: 415 IMKRITNTLRSTVKSIEAKAGNSTMGASSYSIGKNLNSISTEITDMQDRLNTIENRYYSK 474 Query: 440 FTQLDVLMTSLNSTSSYLTQ 459 F+ +D + +N +SYL+Q Sbjct: 475 FSAMDSAIQKMNEQASYLSQ 494 >UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W113_9BACI Length = 513 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 108/429 (25%), Positives = 193/429 (44%), Gaps = 73/429 (17%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--TANTALS 65 G SG+D++ ++ L A++ + + Q ++ Y + F+ T ++ L Sbjct: 7 GFASGMDINQMVSDLMRAERQPMERMEQNQQELILQMDKYREVNREFMQFRDNTFDSVLR 66 Query: 66 KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT-LTTRTTRDDTKTAIATS 124 ++++ + + +S+ A SAT + A G YT LA + T ++T D AT Sbjct: 67 RSNMTAQNAVSSNENAVSATASAGAAQGTYTFEDVSLASSTTNVSTERIGVDGADYTATL 126 Query: 125 DS----KLTIQQGGDKDPITIDI-------SAANSS---------LSGIRDAINNAKAGV 164 D +L + G+ + DI A N S LS + INN++ G+ Sbjct: 127 DEVFGDELAMNNDGE---VVFDITTYGPDGEAINGSFSFDPESATLSEVFAEINNSELGI 183 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA------SSNGMEV 218 A G R+S+T G + + DD + + ++ SA + NG EV Sbjct: 184 QAYFDTDGG---RISLTRTTEG-------AFNPDDGPE--IDFNDSAFLTDNLALNGDEV 231 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLN-DVTTGNQTLTITQDTSKAQTAIKD 277 S +NA T+N +A+E SSN+ + ++ + +NLN ++ G T+ + DT + I + Sbjct: 232 S--GENASFTMNGLAMERSSNSFN--IDGLQVNLNSNMENGQATVRVNTDTDQIMETITN 287 Query: 278 WVNAYNSLI----DT--------FSSLTK-----YTAVDAGADSQSSSNGALLGDSTLRT 320 +V+ YN +I DT ++ LT+ + ++ + +G L DST+ + Sbjct: 288 FVDEYNEMIGGMDDTVSEEYYRDYAPLTEEQMQAMEEREIEMWNERAESGLLRRDSTINS 347 Query: 321 IQTQLKSMLSNTVSS----SSYKTLAQIGITT--DPSD-GKLELDADKLTAALKKDASGV 373 Q + N V + ++ L +IGITT D D G+LE+D +L A++ D+ V Sbjct: 348 ALNQFRMDFYNPVDAGMDNQTFSQLTEIGITTSSDFQDRGRLEIDETQLRNAIESDSESV 407 Query: 374 GALIVGDGK 382 L DG+ Sbjct: 408 YQLFAADGE 416 >UniRef50_A6DX67 Possible flagellar hook-associated protein 2 (Filament cap protein) n=1 Tax=Roseovarius sp. TM1035 RepID=A6DX67_9RHOB Length = 541 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 118/404 (29%), Positives = 189/404 (46%), Gaps = 36/404 (8%) Query: 10 GSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+G++++ + DSLT A+ A I+ + +LS Y L+ + AL Sbjct: 13 GTGINIAELADSLTQAEIAPRRALIAERIDRAEVRLSGYDRLRG---QAEQMGDALELMR 69 Query: 69 LFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 S+ S +S +A S T G I V+ LAQ+Q L+ + + I Sbjct: 70 GLSSRSLSSDNSAVSVTVSDPGKVDLQNARIGVSQLAQSQVLSF-VGFSEAEAEIGAG-- 126 Query: 127 KLTIQQG---GDKDPI---------TIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 LT++ G D P+ TI SSL+ + +A+++ G+SA +I++G+G Sbjct: 127 ALTVEFGNWSADVPPVFSAGTRTAQTITFQP-GSSLADMAEALSSLD-GLSARVIDLGDG 184 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 + L V S +TG NA+ LSV+ D A +D SA ++V AQ+A+L++N +A+ Sbjct: 185 TFSLGVIS-ETGSQNALRLSVAAD-ADPRMAQFDISADPGAVQVQ-GAQDAKLSLNGIAV 241 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SSN I D L +TLN+ T + L+ + A ++ +V+ N+ SLT Sbjct: 242 TRSSNQIDDLLPGVTLNVTGQTLSDANLSGRANVEGALEVMQSFVDIINATQGLVKSLTA 301 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 + G G L GDS + ++S+LS L+ IGI T+ DG Sbjct: 302 RGFGEGGV------AGDLAGDSLADGVLRGMQSVLSRGFGVKGVH-LSDIGIRTE-RDGS 353 Query: 355 LELDADKLTAALKKDASGVGALIVGD--GKKTGITTTIGSNLTS 396 L LDAD+ + AL + + + LI D G I+ T GS T+ Sbjct: 354 LSLDADRFSTALTANPALLDPLIRDDLVGTTVQISGTPGSGATA 397 >UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWS8_9AQUI Length = 443 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 45/379 (11%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 G+ D +I+D + + L + +++ AKLS+ G L + F + L L Sbjct: 12 GTNFDGGAIVDQIMQLRSLPLQRLQQEKALVQAKLSSLGNLSKGIGDFLSIFEGLDVDAL 71 Query: 70 FSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS-K 127 F A TSS T +A +A ++++V L+QA+ + D A+S + Sbjct: 72 FKAKQATSSNTDVLTAAATDDAPNLSFSVTVNKLSQAEIRVSNGGVSDLSNTFASSGTLT 131 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 +T G + ID +A + +L + DAIN+ + V AS+ G Y+L ++ ND G Sbjct: 132 ITYDTGNGTETFNIDYNAGD-TLEDLVDAINSTQERVKASVYYDGT-SYKLMLSENDVGA 189 Query: 188 DNAMT--------LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN-NVAIENSS 238 T +SVSG L S +G +G++ AQNA++ + + + Sbjct: 190 STVETDTGTGVYVISVSG---LPSELG-------SGLDTLQKAQNAEIVIGTGSPVTSPD 239 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N D + +T+ + D TG+ +T++++ SK + + D+V YN L+ SLT Sbjct: 240 NKFEDVISGLTIEVKD--TGSANVTVSENYSKVTSFLNDFVKKYNGLVRLVDSLT----- 292 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 + GD T+ +++T + LS + K L I D G++ L+ Sbjct: 293 -------TGEQALFRGDYTIGSVKTGIAERLSPLID----KGL----IEYDGDTGEISLN 337 Query: 359 ADKLTAALKKDASGVGALI 377 DKL L D GV ++I Sbjct: 338 TDKLNELLNTDPEGVKSII 356 >UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Bacillus pumilus RepID=A8FHX1_BACP2 Length = 504 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 127/512 (24%), Positives = 222/512 (43%), Gaps = 78/512 (15%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--TANTALS 65 G + D+ I+ L ++A L ++ Q+ + + +Y + S + L Sbjct: 7 GFSNVFDIDEIVSKLMKTEQAPLDKMTRQKQTLEWQRDSYREVTSKVKELDDLIYKLELG 66 Query: 66 KADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT----- 119 + + A TSS +A +AT + NA +G +I+VT LA A + T T Sbjct: 67 RPSTYGAKKVTSSNESAVTATGSTNAASG--SINVTQLATASVFKSSGTSGFTPANGTFT 124 Query: 120 -AIATSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSA---SIINVGNG 174 + T DS P T+ I+ A++ ++ I +NN++ GV+A I + N Sbjct: 125 FEVTTPDST---------KPKTVTINTADTDTIDDIVKKLNNSQLGVTAYKGQIFDGSNY 175 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSF--MGYDASASSNGMEVSVAAQNAQLTVNNV 232 +++TS TG +++ + ++ F +G+ N + + Q AQ +N + Sbjct: 176 VDTVALTSRTTG--EGVSIKATDGNSASFFTQLGFQVDGD-NKLVATTQGQKAQYEINGL 232 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT---- 288 +EN++NT A IT L T +L ++ D IK +V+ YN L++ Sbjct: 233 KMENNNNTFEQA--GITYELKGTTDKPVSLNVSTDVDTIFDKIKQFVDKYNELVEQVNGK 290 Query: 289 --------FSSLT---KYTAVDAGAD--SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 + LT K D + ++ +G L DS LR ++++S +++ Sbjct: 291 VNEKRNRDYHPLTAEEKKAMSDKEVELWETTAKSGLLRSDSILRGGASKIRSDFYAEITT 350 Query: 336 SSYKTLA--QIGITTD---PSDGKLELDADKLTAALKKDASGVGALIVG-----DGK--- 382 S + QIGITT GKLE+D +KL A++ D V + + D K Sbjct: 351 SDANKIHITQIGITTSNKYKDGGKLEIDEEKLRKAIEADPQNVSQMFISGKLNVDSKDKD 410 Query: 383 -------KTGITTTIGSNLTSWL--------STTGIIKAATDGVSKTLNKLTKDYNAASD 427 + GI + ++LT++ STT +K G K L+ LTK + D Sbjct: 411 KAQQQYNEQGIIYRVQNSLTAFTKSIQKKAGSTTMQLKEYVLG--KDLDSLTKRMDTFQD 468 Query: 428 RIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 R+ RY ++F+ +D + LN+ S YL+Q Sbjct: 469 RLKMVETRYYKKFSAMDSAIQKLNNQSGYLSQ 500 >UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTR0_CHRVO Length = 451 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 122/454 (26%), Positives = 200/454 (44%), Gaps = 53/454 (11%) Query: 31 TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLFSATSTTSSTTAFSATTAGN 89 T + Q S A+ A L+ AL ++++ L+ K L + + + S T GN Sbjct: 27 TQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMASVTAKGN 86 Query: 90 AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ-QGGDKDPITIDISAANS 148 A AG Y++ V LA +Q L D A A + K T++ GG+ + +D S ++ Sbjct: 87 AAAGNYSVFVEQLASSQQLLM----GDLAGATAKAGDKFTVKLAGGESFDVALDGSDRDN 142 Query: 149 ----SLSGIRDAINNA--KAG-VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS--GDD 199 S S + AIN A AG V+A ++N NG +L +++ +G N ++L +S GD Sbjct: 143 DGKLSPSELALAINRASGNAGKVNAMVLN-NNGVSQLVLSAGKSGEKNTISLDLSGVGDA 201 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDV 255 L+S + S E+S AQ+A + + N V ++ SNT D +E ++ +N V Sbjct: 202 GLKSGL-------SAPKELS-KAQDAVVWLGGKTNGVRLQQGSNTF-DNIEGVSFTVNKV 252 Query: 256 ---TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNG-- 310 T +++++ S ++ +V+AYN + + L SQ SNG Sbjct: 253 SKDTDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDL-----------SQPGSNGKP 301 Query: 311 --ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKK 368 DS++R +++QL ++L T Q+GI DG LELD+ KL LK Sbjct: 302 GAPFADDSSIRGLRSQLNAILRQPFDGV---TQGQLGIKA-TRDGTLELDSKKLGETLKA 357 Query: 369 DASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASD 427 + G + G L WL+ + G++K D + L + +A Sbjct: 358 TPDALDRFFNG-ASQNGALKQSADYLDKWLNGSNGMLKLRRDSEDRNQKDLGRRQDALQK 416 Query: 428 RIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 D RY QFT+L + + T L F Sbjct: 417 TFDQTYNRYLAQFTKLQSMQDQMTQTMGMLNSNF 450 >UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 Tax=Thermoanaerobacterales RepID=B0K3A2_THEPX Length = 519 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 143/512 (27%), Positives = 230/512 (44%), Gaps = 74/512 (14%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT-ALSK 66 G+ +GLD SI+ L A L + Q+ + + + S L + + N L Sbjct: 19 GLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVFKLKL 78 Query: 67 ADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQT------LTTRTTRDD--- 116 F A + TSS + + TAG NA+ G YTISV+ LAQA T + T D Sbjct: 79 QGTFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNSDGTY 138 Query: 117 TKTAIATSDSKLTIQ----QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T A+ + S +T+ G DK+ I + + ++ I N + GVSA+ Sbjct: 139 TYNALNNTGSDITLYLKGLDGNDKEIIIKNGATIKDIVAAINAKTN--ETGVSAT---YD 193 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV-SVAAQNAQLTVNN 231 G RL + SN TG ++ + S + D Q+F+ S ++ + Q+A T N Sbjct: 194 PGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTGGITGQDALFTFNG 253 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 V + +S+N ++ A NIT L + TLT+ D K IK +V++YN +I ++ Sbjct: 254 VQMTSSTNNVTVAGINIT--LTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKINA 311 Query: 292 -LTKYTAVD----------AGADS------QSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 LT+ D A DS + + +G L D TL + +++++S+TVS Sbjct: 312 KLTEKRYYDYPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSSTVS 371 Query: 335 SSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 +L+ IGITT GKL +D KL A+ D V + G S Sbjct: 372 GVG--SLSSIGITTGQWYEGGKLYIDETKLKDAIANDLDKVMKIFAG-------VYETDS 422 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTK---------DYNAASDR---IDAQVA------ 434 N + L T+GI + D + + ++ +T+ D + +R ID ++A Sbjct: 423 NGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQRYL 482 Query: 435 -----RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY QFTQL++ + +NS S++L+QQ Sbjct: 483 NDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQI 514 >UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9L8_9DELT Length = 564 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 22/358 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 I+ G+G+G D +S++ L ++ +T + + S+T K +A+ L S + + +T Sbjct: 18 ITYTGLGNGTDFNSLITKLVQVEQGRITTLQTWKQSWTDKQTAFQKLNSEMLSLKTTLEG 77 Query: 64 L-SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + S + S T+ ++ +T + TT NA G ++I+V LA A+ ++++T I Sbjct: 78 MDSVGEFLSKTTDSTDSTILAVTTGANADNGSHSITVNRLATAKAMSSKTGYTSATEDIN 137 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSV 180 S S+++ K + AN +L+ + INN GV ASI+N G+ +Y L + Sbjct: 138 PSSSEVSFNY-TYKGVTYSNAIGANCTLTDLASIINNDPKNPGVKASIVNDGS-KYYLQL 195 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 DTG ++ +L+++ + L F D + +N + + T V I +N+ Sbjct: 196 RGMDTG--DSASLTIANNSGLSGFTNADFNTITNNASAQLKL-DGWPTDAGVWITRETNS 252 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ++D L +TLNL T + T T T K I+ +V N++ LTK+ Sbjct: 253 VTDLLSGLTLNLKSTGTVDVTTTTDTATVKKN--IQTFVEQMNTVRTLLQDLTKF----- 305 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-----VSSSSYKTLAQIGITTDPSDG 353 DS + L G+ L+ I T LK+ ++ ++ Y TLAQ+GI TD S+G Sbjct: 306 --DSTTQQASILTGNYGLQLIDTNLKTAVAGKGIGFDYTTDKYSTLAQLGIATDASEG 361 >UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0K4_PSYIN Length = 447 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 99/385 (25%), Positives = 174/385 (45%), Gaps = 45/385 (11%) Query: 95 YTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA----NSSL 150 Y + V LAQ L T+ T+ + + LT+ G+ T+D++ A N L Sbjct: 87 YQLFVEQLAQHHQLATQLPSGTTQDSFVPASGVLTMNINGES--FTVDLAVADKVGNGEL 144 Query: 151 S--GIRDAINNAK--AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG 206 S + AINNA GVSAS++ + NG+ +L + + TG +N++++S S D++ Sbjct: 145 SYLDLVTAINNAPDNTGVSASLV-ISNGQIQLLFSGDKTGAENSVSISSSTADSV----- 198 Query: 207 YDASASSNGMEVSVAAQN--AQLTVNN--VAIENSSNTISDALENITLNLNDVT---TGN 259 +D + +SN M + +Q+ A L V N + ++NSSN + + L L Sbjct: 199 FDTAMNSNNMTELLKSQDAIAWLGVENSGLKLQNSSNEMEGVFSGVDLTLKKAHQSGEAG 258 Query: 260 QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 +T+ I D + + V YN + S++ KY+A +++ S GAL D T R Sbjct: 259 ETIIIDADKQGTKDVMDALVKQYNKIA---STIDKYSAT---GNTEGQSRGALASDPTTR 312 Query: 320 TIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 +I+ L+ + T T+ ++G DG L D D A K + + + G Sbjct: 313 SIKNSLRGVFQQTFDGI---TMGELGFEF-SRDGTLSFDGDTFEAFQKTSTADIEEIFRG 368 Query: 380 DGKKTGITTTIGSNLTSWL-----STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVA 434 +G S L L +++G IK + + +++ + + + A Sbjct: 369 EG-------MFLSQLQGKLDIYNDNSSGTIKNQIESIDIQKSRVDNKLESLDRKYENFYA 421 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQ 459 RY +Q+T L L T +N+ S+ +Q Sbjct: 422 RYLKQYTSLSTLQTQMNNISTMFSQ 446 >UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT19_9FIRM Length = 603 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 102/350 (29%), Positives = 163/350 (46%), Gaps = 56/350 (16%) Query: 149 SLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD--ALQSFMG 206 +L + D IN A G +AS N G G++ L TS TL ++G D ALQ F+ Sbjct: 270 TLQQVIDKINAAGVGAAASFDN-GTGKFTLQATSG--------TLDLTGSDSAALQLFI- 319 Query: 207 YDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQ 266 D + +V Q+A T++ V + +SNT + + +T NL V G ++ ++ Sbjct: 320 -DKLKLPANLP-TVHGQDAIFTLDGVNLTQASNTFT--ISGVTYNLKAV--GTASVAVSP 373 Query: 267 DTSKAQTAIKDWVNAYNSLIDTFSSLTK---YTAVDAGADSQS--------------SSN 309 D KA +K +++AYNS++D ++ K Y D Q + + Sbjct: 374 DNDKAIANVKAFIDAYNSVLDKINAELKEERYPDYLPLTDEQRKEMSESQVTEWEKLAKS 433 Query: 310 GALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITT-DPSDG-KLELDADKLTAA 365 G L D L+ +++ ++ V + Y +L+ IGITT D S+G KL LD KL AA Sbjct: 434 GMLRRDPILQDTLFKMRYDIATPVQGVTGQYTSLSSIGITTGDYSEGGKLYLDETKLKAA 493 Query: 366 LKKDASGVGALIVGDG---KKTGITTTIGSNLTSWLSTTGIIK------AATDG-VSKTL 415 L+ D V L +G ++ G+ + L L IK AA DG + L Sbjct: 494 LEADPDIVNKLFGSNGATREQDGVAVRLYDTLKGALDK---IKGEAGTSAAVDGDTTSVL 550 Query: 416 NKLTKDYNAASDRIDAQVA----RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + KDY + +D ++ RY +QF L+V ++ +N + +L QQF Sbjct: 551 AQRIKDYQKQMEAMDRRLKDIEDRYYKQFDALEVALSKMNQQTGWLLQQF 600 >UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF2_BACSK Length = 579 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 32/267 (11%) Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 A +NAQ TVN + E +SNT + L +T+ L D +T TL+ D IK +V Sbjct: 308 AGKNAQFTVNGIETERTSNTFT--LSGMTITLKDTSTQAVTLSAATDVDSIVETIKSFVE 365 Query: 281 AYNSLIDT------------FSSLT-----KYTAVDAGADSQSSSNGALLGDSTLRTIQT 323 YN+L+D + LT + T +A + + +G L D L+T T Sbjct: 366 EYNALLDHMNGKLNEKYYRDYDPLTDEERDQLTESEAKRWEEKAQSGLLRRDPLLQTALT 425 Query: 324 QLKSMLSNTV-SSSSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVG 379 ++ L V + ++ L+QIGI+T + GKLE+D +KL AA+++DA V + G Sbjct: 426 NMRQTLYEPVDTGGAFTHLSQIGISTTKNYKDGGKLEIDENKLRAAIEEDADSVYTIFAG 485 Query: 380 -DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK----TLNKLTKDYNAA----SDRID 430 D +GI T+ +NL+ +S+ + ++G + TL K TK+ R++ Sbjct: 486 TDNNGSGIGQTLRANLSDSMSSLSMRAGGSEGYYEEHQFTLGKQTKELTDRIANFERRLE 545 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYL 457 + ARY QFT ++ M N+ S L Sbjct: 546 QKEARYWRQFTAMEKAMQLANAQSESL 572 >UniRef50_A6W191 Flagellar hook-associated 2 domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W191_MARMS Length = 546 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 27/268 (10%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ SLG GSG+DL S++ + +AQK A + ++ + A+LSA G + SA+ TF+++ Sbjct: 2 SVGSLGAGSGIDLESLVKQMVSAQKDAKVKLYQDRIDGYEAELSALGRVGSAIDTFKSSV 61 Query: 62 TALSKADLFSAT----STTSSTTAFSATTAGNAIAGKYTISVTHLAQ-AQTLTTRTTRDD 116 AL+ +LF+ + T + TT A G Y I V LA+ ++ ++ T Sbjct: 62 KALNDDELFTGRDAKIAQTEGEEVIAITTDNTASNGSYAIDVNQLAKGSRVMSAPGTFSS 121 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNG 174 + DS+LT + G ++ IT+D A ++LS +R+ IN ++ GVSA++++ GNG Sbjct: 122 ADDVVTKQDSRLTFKAGSNEFSITVD---AGTTLSELRNQINTSEDNFGVSANLVDDGNG 178 Query: 175 EYRLSVTSNDTGLDNAMTL---SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 + TS G N + + S+ D+ + + N +E +N TV + Sbjct: 179 NLFFTATSAIQGAANTLKIINTSIVRDE--------NGNIIDNPIE-----ENVDNTVED 225 Query: 232 VAIENSSNTISDALENITLNLNDVTTGN 259 IE S I D + + L +DV N Sbjct: 226 APIEEQSEPIVDEKDELDLAGDDVDFAN 253 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 118/238 (49%), Gaps = 20/238 (8%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 A++A +TV+ + I N +NT +A+ +++ T + I+ D Q I++++ + Sbjct: 320 ARDAIITVDGIQIRNDTNTFDNAVAGLSIEALAPTDKTTKVEISFDQKTVQETIEEFIAS 379 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALL-GDSTLRTIQTQLKS-MLSNTVSSSSYK 339 YN +I G SS GA+L G+S +R +Q+ L + ++S+ +S + Sbjct: 380 YNDVI--------------GVLQASSDKGAVLNGNSVVRNLQSSLSTQLMSSHGNSGVFT 425 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 ++ +G+ D + GKL D K A+KK S + LI GD G+ ++ + L ++ Sbjct: 426 SIFDLGVKMD-NKGKLSFDNAKFDNAMKKGYSDIAPLIAGD---NGLAQSLENLLDNYTG 481 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 ++G+ + D V ++++ + DR+ + +FT LD + ++N+ YL Sbjct: 482 SSGMTNSLKDSVRRSIDSTEGALESYEDRMVKYEESLRSKFTSLDSRLANMNAQGGYL 539 >UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5H1_DESAP Length = 606 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 98/371 (26%), Positives = 159/371 (42%), Gaps = 53/371 (14%) Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY-RLSVTSNDTGL 187 T Q G + T + A +L+G+ +N A + ++ G R+SV++ TG Sbjct: 244 TYNQNGTPNNRTFTVDAVTETLNGV---LNRISADSALGLVAFYEGSSDRVSVSTTRTGD 300 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALEN 247 +NA +GD+ G+ A G V NA++T+N + I +N S L N Sbjct: 301 NNA-----AGDEIGVGTTGFLAEVLRLGTAVEQGGTNARITLNGLDITRPTNEFS--LNN 353 Query: 248 ITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF------SSLTKYTAV--- 298 + +L TG TLT+ DT+ I+ +++AYN ++D Y + Sbjct: 354 VHFSLK--ATGTATLTVRSDTAFVFQHIRGFIDAYNGILDLLNGKLQEERFRDYLPLLDD 411 Query: 299 DAGAD----------SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGI 346 D + Q + +G L DS L +I +L++ + VS +S L IGI Sbjct: 412 DPARERMTEKQIDQWEQKARSGLLRHDSLLSSIVNRLRTDVFTPVSGLGASLNHLVHIGI 471 Query: 347 TTD--PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 T GKL +D KL A+++D GV L G T IG L +L T I Sbjct: 472 TVGSFADQGKLVIDEAKLRRAIEQDPEGVARLFNQSGT-TNEEQGIGHRLYGYLDTA--I 528 Query: 405 KAAT--------------DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 K T + + ++ L + +R++ RY +QFT L+ ++ + Sbjct: 529 KQLTARAGSPTYASSYDPSWLGRQISMLDERMQRTEERLEKLEDRYWKQFTALERAISRM 588 Query: 451 NSTSSYLTQQF 461 N+ S +L QQF Sbjct: 589 NAQSMWLAQQF 599 >UniRef50_C1F8I7 Flagellar hook-associated protein 2 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8I7_ACIC5 Length = 561 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 35/328 (10%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAK---LSAYGTLKSALTTFQTANTALSK 66 G G D+++ ++++ +A TP NQ +S ++ L++ GT SAL+T A T + Sbjct: 14 GQGFDVTTTVNNIVTNLQAVETPWKNQLTSLQSQDTALTSIGTDLSALSTSLQALTDF-Q 72 Query: 67 ADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD 125 L ++S T+ T+A A+AG +TI VT LAQ T A+A +D Sbjct: 73 GVLAGKQGSSSDTSVLELTSAAATAVAGSHTIVVTSLAQ--------TSSYYSNAVAATD 124 Query: 126 S---KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 + L+IQ G TI+I++ N++LS + AIN+ GV+A+++ +G RL + S Sbjct: 125 TLSGSLSIQVG-SGSAQTININSTNNTLSSLASAINSGSYGVTANVLTDSSGS-RLELVS 182 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 N +G +T+ S D S S+ + A +A+LTV+ +A+ ++SNT+S Sbjct: 183 NTSGSGGNITVGGSLADTTTS--------SAVSFTQAQAGADAKLTVDGIALTSASNTVS 234 Query: 243 DALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 +AL +T L + G N + IT D + +TA+ ++V AYN ++ ++ T+ Sbjct: 235 NALPGVTFQLLSASPGTNVQVQITNDNTAVETAVSNFVTAYNKVVGDLNTQEGNTS---- 290 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSML 329 S + L G+ T+ T+Q L+S L Sbjct: 291 ----SGTPEPLFGNPTIATLQQTLESAL 314 >UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Persephonella marina EX-H1 RepID=C0QRT8_PERMH Length = 442 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 187/460 (40%), Gaps = 51/460 (11%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 D ILD + + + + +++ +K A ++ + Q L LF+ Sbjct: 14 FDYQQILDQVQYIKSQQILLLQEREAHIQSKKDAITNYRTLIKDLQGIFEDLVSPTLFAE 73 Query: 73 TSTT-SSTTAFSATTAGNAIAGK--YTISVTHLAQAQTLTTRTTRDDTKTAIAT-SDSKL 128 S + S TA S T + ISV LA+ T D AI + S L Sbjct: 74 KSVSISDETALSVTITDPTQVSESNLDISVLQLAKNDVWLTGGGVADKNAAITSLSAGSL 133 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNA----KAGVSASIINVGNGEYRLSVTSND 184 T+ G I D SL I D +N A +SAS+ G YRL + D Sbjct: 134 TVSYQGTDYTINYD---NTDSLQSIVDKLNTQFQSNNANLSASLFFDGVN-YRLMIKGLD 189 Query: 185 TGLDNAMTL--SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 TG N +T+ S++G +L +G G AQNAQ+++ +E+S+NT Sbjct: 190 TGAGNTVTITDSLTGAGSLTDALG--------GFNNVQTAQNAQISIYGTTVESSTNTFD 241 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 L + + VT +TI +D + ++++++ YN ++D Sbjct: 242 SVLPGVVIEAKSVTASPVNVTIGKDYQPFKDKLQEFISKYNEIVDF-------------V 288 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT-TDPSDGKLELDADK 361 + +S G L GD TL++I++Q+ + L+ L ++GI D G L +D + Sbjct: 289 QTNTSKEGVLSGDYTLQSIRSQIFNGLT---------PLMELGIINVDKDTGHLSIDNTE 339 Query: 362 LTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKD 421 L L+ + S V K + + + S L G +K+ G + + + K Sbjct: 340 LDNKLQTEPSTVQT------KISDLDNNLRDYFYSVLDPYGPLKSKEKGYDRQIEAIEKK 393 Query: 422 YNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + RIDA++ ++QF L V M + L+ F Sbjct: 394 IEIDTKRIDAEIEILRKQFIALQVYMAEMEDLRLRLSSLF 433 >UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1P993_BACCO Length = 694 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 66/366 (18%) Query: 145 AANSSLSGIRDAINNAKAGVSASIINVGNGEYR--LSVTSNDTG-------LDNAMTLSV 195 A+ +L+ + +NN+ G++ EY+ ++T +TG +DN + + Sbjct: 343 GADKTLNDVISKVNNSNLGLTMYY-----DEYKDMFTLTRKETGNFNSSSSVDNGNEIII 397 Query: 196 SGD----DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLN 251 S D D L+ + + S G NA +N + E +SNT A+ +T Sbjct: 398 SSDTDTYDFLRDTLKFSGSTEYGGT-------NAVFNINGLDTERTSNTF--AINGVTYT 448 Query: 252 LNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT---KYTAVDAGADSQ--- 305 L T+T++ DT IKD+V+ YNSLID S +Y D Q Sbjct: 449 LKSKFDTPVTVTVSNDTDTIFKNIKDFVDQYNSLIDAVQSKLNEDRYPDYAPLTDDQRKE 508 Query: 306 -----------SSSNGALLGDSTLRTIQTQLKSMLSNTVS----SSSYKTLAQIGITTDP 350 + +G L D TL++ + ++S++ + V+ SS Y L+ IGITT Sbjct: 509 LTDTQQDQWDKKARSGLLRNDMTLKSSLSNMRSLIYSKVNNANISSEYSQLSSIGITT-T 567 Query: 351 SD----GKLELDADKLTAALKKDASGVGALIVGDGKKT---GITTTIGSNLTSWLSTTGI 403 SD GKLE+D DKL AA++ D V L G T GI + ++ +T I Sbjct: 568 SDWLEGGKLEIDEDKLKAAIQNDPDSVELLFRASGSTTSEKGIVQRLYDSVNQTYNT--I 625 Query: 404 IKAATDG--------VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + A + K +N LT + +D++D RY QFT ++ + NS + Sbjct: 626 VDKAGKSTYVNTQFTIGKNINDLTDKISDMNDKLDKLEDRYYAQFTAMEQAIQKYNSQYT 685 Query: 456 YLTQQF 461 YL+ F Sbjct: 686 YLSSFF 691 >UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43029 Length = 612 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 115/430 (26%), Positives = 191/430 (44%), Gaps = 75/430 (17%) Query: 86 TAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGD-KDPITIDIS 144 T N+IA +SVT + +++T T ++I T D + G + KD I S Sbjct: 206 TFANSIASGAQVSVTFIEESETEKY------TTSSITTFD-----RDGKEVKDTFVIKDS 254 Query: 145 AANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLS--VSGD---- 198 +LS + +N + GVS +G +S T +TG++N + + V GD Sbjct: 255 ---ETLSQVFQKVNRSNVGVSIFYDEHNDG---VSATRKETGINNKNSGNEMVFGDGFFN 308 Query: 199 DALQSFMGY-------DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLN 251 + L+ Y D SN E A+NA T+N + + +NT + ++ +T+ Sbjct: 309 EVLKLKENYQVVNEEGDPETRSNVQE----AKNAVFTINGMETQRQTNTFT--IDGVTIT 362 Query: 252 LNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNSLID------TFSSLTKYTAV-DAGA 302 L T GN+ +L ++ DT K IK +V+ YN L+D T Y + D Sbjct: 363 LRGETVGNEEVSLNVSTDTDKVFDTIKGFVDQYNELLDFVNGKLTEERYRDYKPLTDEER 422 Query: 303 DS----------QSSSNGALLGDSTLRTIQTQLKS----MLSNTVSSSSYKTLAQIGITT 348 D+ + + +G L D ++++ ++++ M+SN + S Y L+ IGITT Sbjct: 423 DAISEKEAERWDERAQSGMLRNDRMIQSVMDRMRTDIYGMVSNNL-GSDYNQLSAIGITT 481 Query: 349 --DPSD-GKLELDADKLTAALKKDASGVGALIVGDGK---KTGITTTIGSNLTSWL---- 398 D +D GKLE++ D+L A+++D +GV A+ DG + GI + LTS + Sbjct: 482 SRDYNDRGKLEINEDRLRQAIERDPAGVAAIFNSDGPTSGEKGIIRRMRETLTSGIDSIS 541 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAA----SDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 S G + TL + + N R+ RY QFT ++ M N+ + Sbjct: 542 SRAGGMGGKVANHQFTLGREIESINTRITNFERRLQQVEDRYWRQFTAMEKAMQQANAQA 601 Query: 455 SYLTQQFENN 464 L Q N Sbjct: 602 ESLFAQLYGN 611 >UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=Vibrio RepID=C9NQ91_9VIBR Length = 674 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 13/210 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S +G+ SG+D+++++ + +++ I N++ + +SAYG L+ +L T + Sbjct: 2 SFGPVGMNSGMDINAMVSKIVDSERVPKQQRIDNERGKIDSSISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + + F+A S+ T SAT AIAG+Y I V LAQ+ + + +D K Sbjct: 62 ASFRQEKAFAARKVESTDDTVVSATATTEAIAGRYAIDVLQLAQSHKIASDVLPEDAKFG 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYRL 178 KL I G K T+++ NS L I IN +K GV AS+IN G RL Sbjct: 122 PG----KLQISLGEKK--FTVEVQ-ENSKLVDIVRGINGSKTNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLSV-SGDDALQSFMGY 207 V S+++G NA+ LSV S D L + Y Sbjct: 174 IVASSNSGEQNALKLSVESAPDNLLKRLEY 203 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 23/250 (9%) Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTG 258 A +SF Y GM AAQ++++ ++ VA + + +N I DA+E + L L + Sbjct: 422 AQESFDAY------RGMSQVQAAQDSKVLLDGVAQLSSDNNIIEDAIEGVDLTLKGRSER 475 Query: 259 NQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 +T + I D + I+ +V+AYN L+ G D ++ + G L GD Sbjct: 476 GKTPSEIDIEYDRQGVRDDIEQFVSAYNQFYQVSQELS-------GVDPRTGAAGPLAGD 528 Query: 316 STLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 S +R+ ++LKS+ S+ V + KTL + GITT G LE++ D L L + + + Sbjct: 529 SVVRSADSRLKSVFSSRVEPAPEDLKTLTEFGITTT-RQGTLEINYDMLDRQLNNNFNKL 587 Query: 374 GALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQV 433 G+ G + + TG I+ + + +L D + R+D+ Sbjct: 588 EDFFGGN---QGFAKKVEDAIQGITGVTGSIRTRERSMVEQNYRLDDDQASLDRRMDSLE 644 Query: 434 ARYKEQFTQL 443 R +FT + Sbjct: 645 KRTHAKFTAM 654 >UniRef50_C7M1N5 Flagellar hook-associated 2 domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1N5_ACIFD Length = 852 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 26/246 (10%) Query: 142 DISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDAL 201 +++A N SLS + IN A AGV+AS + V +G Y L + SN TG +A+T+ Sbjct: 347 EVAAGNGSLSQVVSNINAAGAGVTASAVQVSSGTYVLQLVSNQTGTASAITVE---QAPF 403 Query: 202 QSFMGYDASASSNGMEVSVAAQNAQLTVNNVA---IENSSNTISDALENITLNL---NDV 255 QS +G AAQNAQ+ + + + + +N + L +TLNL Sbjct: 404 QSALGS--------FTTIAAAQNAQVQIGGQSGYLVSSQTNQVQGVLPGVTLNLVSAQPP 455 Query: 256 TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 + T+++T D ++I+ VNA N ++ S + Y AG + Q+++ G L+GD Sbjct: 456 GSAPVTVSVTPDGKTLASSIQSLVNAANQVL---SDINTY----AGYNEQTNTGGPLMGD 508 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 STL I +Q+ +++ T+ T AQ GIT + +G + DA ++ + V + Sbjct: 509 STLNGITSQVLGVIAQTLGEGGI-TAAQAGITLN-KNGTISFDAQTFAQLYDQNPTAVTS 566 Query: 376 LIVGDG 381 L G Sbjct: 567 LFAQSG 572 >UniRef50_A6C894 Probable lateral flagellar hook-associated protein 2 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C894_9PLAN Length = 670 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 35/309 (11%) Query: 159 NAKAGVSASIINVGNG--EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM 216 NA SA+II+ G RLS+TS+ +G +G+ L+S + G Sbjct: 378 NATGVASATIIDDGTAFNSARLSITSSRSG--------AAGELILESDYNF-------GF 422 Query: 217 EVSVAAQNAQLTVNN-----VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKA 271 SV A +A + + + + +S+N+ DA+ + ++L T+ + +DTS Sbjct: 423 STSVDADDALIRIGSNPQTSFLLTSSTNSFDDAITGLEIDLLSTGLSPSTINVARDTSGI 482 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 ++ + ++NAYNS +D +SLT G +S++++ G L G+S ++T ++L+ ML+ Sbjct: 483 KSTVTTFINAYNSFVDAKNSLT-------GFNSETNARGVLNGNSLVQTTVSRLEGMLTK 535 Query: 332 --TVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 ++S+SS K++AQ+G+ + +GKLEL++ L A L D V + TG Sbjct: 536 KLSISNSSVKSMAQLGVRFN-GNGKLELNSATLDALLADDPDAVTEFF--QQEDTGFAVV 592 Query: 390 IGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 + +T+ TG +KA TD + + L + + ++A+ R QFT + ++ Sbjct: 593 MDDVITAMTDPFTGTLKAQTDSLQASALALNTRVDELNTILEARRERLIRQFTLQETIVN 652 Query: 449 SLNSTSSYL 457 LNS + L Sbjct: 653 QLNSQQTAL 661 >UniRef50_C8PMN7 Flagellar hook-associated protein FliD n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMN7_9SPIO Length = 659 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 35/280 (12%) Query: 207 YDASASSNGMEVSVA--AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTI 264 YD A+ + V+ AQ A LT + ++ S+N I D + +TL L D T ++++I Sbjct: 367 YDPKATGEYIPVNPVSQAQEASLTFEGIPVKRSTNKIDDLIPGVTLQLEDKTDKPESISI 426 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLT----------KYTAVDAGADSQSSSNGALLG 314 D A+ AI ++V YN L+ + +T +Y D ++ + GAL G Sbjct: 427 KPDPQPAKDAIIEFVAKYNRLLAEINIVTSNQQAVIDEIEYFTDDERKTAEENL-GALFG 485 Query: 315 DSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPSD-----------GKLELDAD 360 D+TL +++ L+ +++N + +TL+QIGI+T SD G LE+D Sbjct: 486 DTTLSSLKNNLRQIVANVYRRNTDTPIRTLSQIGISTK-SDTSSALNEARLRGYLEIDEK 544 Query: 361 KLTAALKKDASGVGALIVGDGKK-----TGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 KL ALK V L D G+ + + ++ GI T+G++ + Sbjct: 545 KLDEALKNSIEDVRYLFGYDTDNDVLIDDGVAYQVFKQIDPYVQRGGIFSTRTNGLAARI 604 Query: 416 NKLTKDYNAASDR-IDAQVARYKEQFTQLDVLMTSLNSTS 454 K +KD A D+ ++ + ++++ +D + +L S Sbjct: 605 -KTSKDKIARYDQALEKKEQELRQKYGDMDGSLRNLQKQS 643 >UniRef50_B0MP31 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP31_9FIRM Length = 856 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 62/295 (21%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVN 280 +N QL VN IE +SN+ + + T+ G + + + +D S A AIK +V Sbjct: 569 GRNLQLEVNGETIETASNSFT--ADGTTMTFTSAAQGAEFSYEVKKDNSSAIDAIKSFVE 626 Query: 281 AYNSLIDTFSSLTKYTAVDAGADS------------------------QSSSNGALLGDS 316 YN +I+ Y +D DS + + G L DS Sbjct: 627 DYNKIIEEV-----YGQLDQKPDSDYYALTDDDIEDMDLSEKQQEKWEERAKKGLLYNDS 681 Query: 317 TLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITT--DPSD-GKLELDADKLTAALKKDAS 371 T+ T+ +++S+L +TV ++ +T L +GITT D D GKLELD KL AA ++ A Sbjct: 682 TVSTVMQKMRSVLYSTVKTADGQTFSLFSMGITTSDDWGDHGKLELDETKLEAAFEQYAD 741 Query: 372 GVGALIVG-----DGK--KTGITTTIGSNLTSWLSTTGIIK---------------AATD 409 + L G +G KTGI + LT + TTG K +ATD Sbjct: 742 QIADLFAGTTVDENGNTVKTGIMHKLDDVLTGAVKTTGARKDKGTLVQLAGTKTGTSATD 801 Query: 410 G-VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ--QF 461 + L ++ ++ R + Q RY +QF+ L+ +M SLNS +SY+ Q QF Sbjct: 802 NSIYDQLKSISTLISSLETRYEKQQDRYWKQFSNLETMMGSLNSQTSYIQQLMQF 856 >UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF31_PETMO Length = 502 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 121/503 (24%), Positives = 209/503 (41%), Gaps = 62/503 (12%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-K 66 G SG+D +++ L ++ L + ++ T K + + + + L F K Sbjct: 14 GAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDYLITFKLK 73 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA---- 122 ++L ++T+S + +AT +A + + V LA L K + Sbjct: 74 SNLIPKSATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKKSSTIGDV 133 Query: 123 ---TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS---------IIN 170 T DS TI +G + D IT+ + + ++ + D IN + GV A I+N Sbjct: 134 IGTTGDSTFTITKGTNSDTITV---SDSETIQNLIDKINASILGVEAKFDDANGKFFIVN 190 Query: 171 VGNGEYRLSVT----SNDTGLDNAMTL----SVSGDDALQSFMGYDASASSNGMEVSVAA 222 NG +SV+ SN L A+ L + D+ + + S +E+S Sbjct: 191 KENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTL------GSLGQVELSFDG 244 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 T +N+ EN+ N T++L ++G ++I QD K+ +IK++V+ Y Sbjct: 245 STTITTYDNLT-ENTLNIFG-----TTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKY 298 Query: 283 NSLIDTFSSLTKYTAV-DAGADSQSSSN---GALLGDSTLRTIQTQLKSMLSNTV----S 334 N I L V D + + + G L GD+ L I L++M+ + V S Sbjct: 299 NETITYVYDLLHEDQVTDKPTEEMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQS 358 Query: 335 SSSYKTLAQIGITT--------DPSDGKLELDADKLTAALKKDASGVGALIVGD---GKK 383 S Y L IGIT+ + G L +D DKL AL +A V L + K+ Sbjct: 359 GSQYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNTNAEDVWKLFATNDTTNKE 418 Query: 384 TGITTTIGSNLTSWLSTTGIIK--AATDG-VSKTLNKLTKDYNAASDRIDAQVARYKEQF 440 G ++ + L G I A T+G + + +L + DR+ + A+Y QF Sbjct: 419 YGYAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQF 478 Query: 441 TQLDVLMTSLNSTSSYLTQQFEN 463 + ++ + LN+ Y+ F N Sbjct: 479 SAMEQAIQQLNAQGLYIQNAFSN 501 >UniRef50_Q7NRQ1 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRQ1_CHRVO Length = 513 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 107/375 (28%), Positives = 168/375 (44%), Gaps = 66/375 (17%) Query: 43 KLSAYGTLKSALTTFQTANTALSKADL-FSATSTTSSTTAF-SATTAGNAIAGKYTISVT 100 +LS G L S L TFQ++ + + F + +SS A S +T+ A Y ++V+ Sbjct: 56 ELSTLGQLMSILGTFQSSLQQIYAPSIRFGGGTASSSNPAVASVSTSSGAQNASYLLNVS 115 Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDK--------------DPITIDISAA 146 LAQAQ+ TT + D+ + + S S LTI G P+TI IS Sbjct: 116 QLAQAQSATTSFSLSDSGSTVVGSGS-LTISTGSYAYTSSTSATSFTASGSPVTISIS-- 172 Query: 147 NSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ---- 202 N +LS I +IN A AGV A+++ +G Y+L ++ TG N ++VS +D Sbjct: 173 NGTLSSIASSINGAGAGVVANVVQNASGGYQLQISQASTGASNNFKITVSDNDGNNTDQS 232 Query: 203 --SFMGYD---ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT 257 S + +D A S + + AA NA TVN + ++SN ++ NL + T Sbjct: 233 GLSRLAFDQTQAVGSGQNLTQTQAALNASYTVNGASGSSASNAGIQLGSGVSANL--LAT 290 Query: 258 GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDST 317 G+ +T+ D + T+ + +A+N+ + +S LLG+ Sbjct: 291 GSSNITVNVDFGQLNTSAQSLASAFNTALGAINS--------------------LLGNQV 330 Query: 318 LRT---IQTQLKSMLSNTVSSSSYK-------TLAQIGITTD-PSD----GKLELDADKL 362 L + I QL ML N + SY TL+Q+G+ P+ G L L+ L Sbjct: 331 LPSQDPIARQLPQML-NQQAQKSYSNGSSLLTTLSQVGLNYQSPAQYGLGGTLNLNVASL 389 Query: 363 TAALKKDASGVGALI 377 AA D+SG L+ Sbjct: 390 QAAYNSDSSGTANLL 404 >UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM4_DESAD Length = 580 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 105/429 (24%), Positives = 176/429 (41%), Gaps = 39/429 (9%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 +G+G D I+ + Q + N ++ + K + L + +T TA ++ Sbjct: 30 LGNGTDFGEIVKNTLKQQGFHQRRLENWRAQWVKKQESLKGLNTKMTELSTALNKMNSIG 89 Query: 69 LFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 F T+SS ++ +AT A Y + + LA+ T+ + K I+ S SK Sbjct: 90 KFMGRVTSSSDSSCVTATADSTAPTSPYKVEIKQLARNDIWTSNSGYASEKDVISPSGSK 149 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 ++I GG I + L + +A K V I GN EYRL +S G Sbjct: 150 ISISCGGKTANIDVPGGTTVEGLVKMLNATTELKDLVQVEAIKTGN-EYRLKFSSLKMGE 208 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA------IENSSNTI 241 N +T + S L + A AS ++ QN+++ ++ IE +NT+ Sbjct: 209 ANRITFNAS--TTLPAL----APASMTNLQ---QGQNSKIKIDGFPEGTDNWIERDTNTV 259 Query: 242 SDALENITLNLNDVTTGNQTLT-ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 +D + +TLNL T+ + + + DT K ++++V N + ++K VDA Sbjct: 260 TDGSKGLTLNLKKATSPDSVIVNVNTDTEKIIENVREFVKQVNIVRQALRDISK---VDA 316 Query: 301 GADSQSSS-----NGALLGDSTLRTIQTQLKSMLSN----TVSSSSYKTLAQIGITTD-- 349 D + S G L + I +N T + Y TL +GI T+ Sbjct: 317 TKDKEKGSILTGNYGVQLASHRFKDITATKGQGFNNFDSATGAGDRYNTLRTLGIETETD 376 Query: 350 ---PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 P+ G L++D +K A+K + GV L D + +T N T G+ K Sbjct: 377 QSSPNFGLLKIDEEKFEKAMKDNPDGVAKLFSADYE----ASTSSPNFTIKSLIKGVTKP 432 Query: 407 ATDGVSKTL 415 T VS T+ Sbjct: 433 GTHDVSYTV 441 >UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA02_9FIRM Length = 733 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 59/332 (17%) Query: 177 RLSVTSNDTGLDNAMTLSVSGDDAL-QSFMGY---DASASSNGMEVSVAAQNAQLTVNNV 232 R ++T+N TG + L G+ AL ++ G D S G A +NA+ TV+ V Sbjct: 412 RFTLTANSTGAAFDIKL---GNTALSEAIFGKAPADPSKPDAGGYTFTAGKNAKATVDGV 468 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 IE SSNT + + L T +T+T++++T + +K ++ YN+LID +SL Sbjct: 469 EIERSSNTFE--FNGLNITLTGTTDKTETITVSRNTDQIVDGVKSFIEDYNALIDKLNSL 526 Query: 293 ----TKYTAVDAGADSQ--------------SSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 T Y D+Q + G L DST+ T Q++S + + Sbjct: 527 IEEDTDYREYAPLTDAQKKEMSEKEIELWEEKAKKGLLRNDSTISTFLQQMRSAIYQRPA 586 Query: 335 SSSYKTLAQIGITTDPSD--GKLELDADK---LTAALKKDASGVGALIVGDGKKTGITTT 389 S + + +GI T + GKL +DAD L AA++ + GV AL G+ G+ + Sbjct: 587 GSPF-AIYDLGIETGEWETKGKLVMDADGEATLRAAIESNPDGVVALFTGE---QGLASQ 642 Query: 390 IGSNLTSWLSTT--------------GIIKAATD------GVSKTLNKLTKDYNAASDRI 429 + LT+ ST+ G + A+D + +++ KD AA ++ Sbjct: 643 LDKILTNTASTSFVSGNSRGSLVEIAGYAETASDKDNTLYNTIQQIDQKIKDLKAAYEQ- 701 Query: 430 DAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + RY +F ++ ++ ++S SS+L QQF Sbjct: 702 --EKTRYWNKFNAMESMIQQMSSQSSWLAQQF 731 >UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GW17_9DELT Length = 577 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 101/474 (21%), Positives = 203/474 (42%), Gaps = 67/474 (14%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+GSG+D I++ + + + + K+ A L++++ + ++ +++ Sbjct: 13 GLGSGMDFDQIVNQMVQIEGRRIQRLQQDMQQEQVKMEASQELQNSMVSMRSEMDSMNTL 72 Query: 68 -DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 D F ++ + + SA+ +A G Y + V LA+ + + ++T + +S Sbjct: 73 DDFFIRSAESGQESVASASADSSAEEGSYNLEVGQLARNHIMFSNEGFEETDDVVNSSGE 132 Query: 127 KLTI------QQGGD-KDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYR 177 T ++G D + + +++ ++L G+ + IN GV A++IN GN EY Sbjct: 133 TRTFSYQYGPEEGEDAHERVDLEVPEG-TTLQGLVELINEDPDNPGVRATLINDGN-EYF 190 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA---- 233 L + D G D + + D G+ A + + S AQN+++ V+ Sbjct: 191 LQLKGMDQGADYKVEIK----DEETDLDGFKA----DDFDTSQEAQNSKIKVDGWPRDEV 242 Query: 234 -----------IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 IE SN++ D +E +TLNL TG +T++ D + ++++V++ Sbjct: 243 DEDGEVTEERWIERDSNSVDDVIEGVTLNL--YETGETQITVSDDHEAIKEQVQEFVDSV 300 Query: 283 NSLIDTFSSLTKYTAVDAG-----ADSQSSSNGALLGDSTLRTIQTQLKSMLSNT----- 332 N+++ +++ + A Q+S L G+ +R +Q +++ +L++ Sbjct: 301 NNVLAMMQGVSRIEEDEEAEDDDMAGPQTS---LLTGNYGVRMVQDRIRDVLASAGVGFD 357 Query: 333 VSSSSYKTLAQIGITT-----DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 + L IGI+T + G L LD +L L +D V + D + + T Sbjct: 358 RDDDPFPNLGSIGISTVTDEEEEDYGLLRLDESRLDEVLDEDPQAVAEIFSADNEPS--T 415 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLN--KLTKDYNAASDRIDAQVARYKEQ 439 T S + G + VS T+ ++T Y ID + AR+ Q Sbjct: 416 DTSDFRFASQIE--GTTRPGLYDVSYTMENGEITNAY------IDGEEARFDNQ 461 >UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6J4_9SPHN Length = 472 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 108/452 (23%), Positives = 198/452 (43%), Gaps = 65/452 (14%) Query: 7 LGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTA-NTAL 64 LG+GSG+D++ + L AQ A ++ Q + ++S G+++S+L+ F A L Sbjct: 12 LGIGSGVDMTGLASQLAEAQFAGRNERLTIQSETLERRISLAGSIRSSLSAFAAALGDRL 71 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 DL + T+++ A ++ G+ G Y++ VT LA Q L+ + + T A + Sbjct: 72 RTGDLAPLPNITNASVAAVSSPLGSIGKGTYSLKVTKLASNQVLSGPIYSNPSDTVGAGT 131 Query: 125 DSKLTIQQGGD----------KDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 LT + G + P+TI+I AA ++L+ + AIN AG++A + NG Sbjct: 132 ---LTFRFGNTDTTSFTEDVTRSPLTIEI-AAGATLADVASAINGKNAGLNAYVAQTANG 187 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 +L V D G+ N + D + + + + +A+ ++ ++ Sbjct: 188 A-QLVVKGAD-GVKNGFIIEAVEDASNPGLANLAWQPGGDASRLIKTSADAEFLLDGISR 245 Query: 235 ENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 + SN+I+ ++L+L G T++ + + ++D A N + + T Sbjct: 246 VSPSNSITGIAPGLSLSLLGTNPGTPATISFNSPNAALSSVMQDITGALNEIASQLRTAT 305 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQIGITTD 349 D +S G L D+ R + L ++ S + + S TL+++G+ Sbjct: 306 ---------DPKS---GDLARDTGARALSRSLSALGSAEIMPNAPTGSPSTLSELGLAIQ 353 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 DG D KLTAAL +D +GV A+ TTGI + Sbjct: 354 -RDGSFTFDNAKLTAALARDPAGVAAMF----------------------TTGI-----N 385 Query: 410 GVSKTLNKLTKDYNAASDR--IDAQVARYKEQ 439 GV T++++ + + ASD + +ARY+ Q Sbjct: 386 GVYSTIDRMARSNSIASDPGSLAGSIARYQSQ 417 >UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Treponema pallidum RepID=FLID_TREPA Length = 722 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 27/260 (10%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 AQ+A + V + +N+I+D + +TL+L++ T +TL++T D + + AI ++V Sbjct: 449 AQDAAFDFDGVHVTRGTNSITDLIPGVTLSLHERTEKTETLSVTPDVNAMKNAIIEFVAK 508 Query: 282 YNSLIDTFSSLT--KYTAVDAGA-------DSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 YN L+ + +T K +D A ++ G+L GDSTL ++ +L+ SN Sbjct: 509 YNRLMAEINIVTSNKSAIIDELAYLTPEEKKKETEQLGSLHGDSTLLMLKDRLRRNTSNA 568 Query: 333 VSS---SSYKTLAQIGITTDPS----------DGKLELDADKLTAALKKDASGVGALIVG 379 + + +TLA IGI+T G LE+D +KL ++L V AL Sbjct: 569 YRAGDDGASRTLAHIGISTKAHASSGINTAQLRGYLEIDEEKLHSSLNAQKDQVRALFGH 628 Query: 380 DGK-----KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVA 434 D G+ T+ L +L +GI ++GV + + K +++ + Sbjct: 629 DSDGDLLVDNGVAFTLTELLNPYLGRSGIFAIRSNGVDERIKSTEKRVETYDKQLEKKER 688 Query: 435 RYKEQFTQLDVLMTSLNSTS 454 + ++ +D + SL S Sbjct: 689 ELRHKYHTMDGALRSLQKQS 708 >UniRef50_C1TL61 Flagellar capping protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL61_9BACT Length = 640 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 36/258 (13%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 AQ+A LTVN + + SSN I D + TLNL V G + +T + KA +I+ +V + Sbjct: 372 AQDASLTVNGIDVTRSSNEIDDLIGGATLNLQGV--GEVNMEVTLNAQKAVESIQAFVES 429 Query: 282 YNSL---IDTFSSLTKYTAVDA--------GADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 YN L I+ S Y D+ D S G L GD+ L ++ L+ ++S Sbjct: 430 YNDLMEYINVRSEEKTYNYSDSPNSDTKAVPEDDLSRRKGLLAGDTVLWQTKSNLRKIIS 489 Query: 331 NTV--SSSSYKTLAQIGITTDPSD----GKLELDADKLTAALKKDASGVGALIVGDGKKT 384 +V ++ L QIGI+T+ +D GKLE D DK A+ D+ V L+ KT Sbjct: 490 ESVGDDEDTFNMLYQIGISTEETDFGKSGKLEFDTDKFMEAMATDSDSVQKLV-----KT 544 Query: 385 GITTTIGSNLTSWLSTT-----------GIIKAATDGVSKTLNKLTKDYNAASDRIDAQV 433 I+ ++ + S +ST+ G I + + + +L + +RI Q Sbjct: 545 -ISESLDTQFDSVVSTSTVAIGDTSTKEGRIPSQINVWENEVTQLQQRIKDYEERITTQQ 603 Query: 434 ARYKEQFTQLDVLMTSLN 451 +Q+ ++ MT LN Sbjct: 604 LNMYKQYAAMEEQMTKLN 621 >UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTT2_DESHD Length = 510 Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 124/518 (23%), Positives = 228/518 (44%), Gaps = 72/518 (13%) Query: 3 SISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I + G+ GSG+D+ ++ + +A++ + +++ K + Y T+ + + +F+ N Sbjct: 2 AIRTYGLSGSGMDVDQMVKDMMSARREQYDKLWQKKTQLEWKKTDYNTMYNTIQSFR--N 59 Query: 62 TALSKADLFSAT----STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR------ 111 T L S T T+S+ +AT +A +I+V LAQ +T+ Sbjct: 60 TTAFNYRLSSTTIPKIVTSSAEGIVTATANADAANVSRSITVGQLAQGANVTSTGKITEE 119 Query: 112 -TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 T+D + + + G TI + + S + D +N + + AS Sbjct: 120 GRTKDSLMSQFGLEEGTFAVVLGDGSTSKTIQVDTSKSIYDFVSD-LNKSGLKIRASYDA 178 Query: 171 VGNGEYRLSVTSNDTGLDNAM----TLSVSGDDALQSFMGYDASASSNG-------MEVS 219 + R ++++ TG D A+ T S G + L+ + G + Sbjct: 179 TLD---RFNISTTGTGEDVAIDFTGTTSEKGKEFLEKLQLHVVKEDGGGGTTTEPITSEA 235 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 + ++A++ ++ I +S NT + TL TG+ + ++ D KA + +KD+V Sbjct: 236 IKGKDAEVVLDGATITHSGNTFTAFGVTYTLK----ATGDANIHVSADNDKAVSVVKDFV 291 Query: 280 NAYNSLIDT---------FSSLTKYTAVDAG--ADSQ------SSSNGALLGDSTLRTIQ 322 + YN+L++T + S T G DSQ + +G L DSTL+++ Sbjct: 292 DQYNALLETINSELNEAKYKSYMPLTNEMKGQLGDSQITQWEEMARSGLLRNDSTLQSLI 351 Query: 323 TQLKSMLSNTVS--SSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALI 377 +L++ ++ VS Y +L+ IG+TT GKL LD +L AL+ D V L Sbjct: 352 YKLRNDIATPVSGVEGKYNSLSAIGVTTGKDYLEGGKLYLDETELKKALEADPDIVNKLF 411 Query: 378 VGDGKKT---GITTTIGSNLTSWL-------STTGIIKAATDGVSKTLNKLTKDYNAASD 427 G+ G I +L S + TG IK T+ TL K +DY + D Sbjct: 412 GSSGEDRNSQGAAVRIYDSLKSTMDNIKETAGITGTIKGDTE---STLAKQIRDYEDSLD 468 Query: 428 RIDAQVA----RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 R++ +++ RY +QF +++ ++ L+ SS+L F Sbjct: 469 RMNDRLSQMEERYYKQFNAMELALSKLSQQSSWLANMF 506 >UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 Tax=Vibrio RepID=FLIDP_VIBPA Length = 670 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 14/208 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ +G+ G+D++S++ + A++ I N +++ A +SAYG L+ +L T + Sbjct: 2 SLGPVGMSGGMDINSMVSKIVDAERVPKQQRIDNDRTTINASISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F+ T T+ SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 62 ANFRQEKAFAVRTVETTDDNIVSATATTDAIAGKYAIDVLQLAQSHKVASDVLPEDAKFG 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYRL 178 KL I G D+ I++ + + + +R IN AK GV AS+IN G RL Sbjct: 122 PG----KLQISLGDDR--FNIEVRSRSKLIDVVR-GINGAKDNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLSVSGD--DALQSF 204 + SN +G D+ + +SV + + L+ F Sbjct: 174 ILASNLSGKDHQIKVSVEAERGNPLKYF 201 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 28/253 (11%) Query: 215 GMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGNQT---LTITQDTSK 270 GM A Q++++ ++ VA + + +N I DA+E + L L + N+ + + D Sbjct: 428 GMTEVQAGQDSEVLLDGVAKLSSHNNVIEDAIEGVDLTLKGKSEPNKPPAEIGVEYDRQS 487 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 ++ I+++V+AYNS T +L+ D + G L GDST+R+ ++LK++ S Sbjct: 488 VRSDIENFVSAYNSFYQTSQALS-------SVDPTTGQKGPLAGDSTVRSADSRLKAVFS 540 Query: 331 NTV--SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 + + + + K+L + GITT G LE++ D L L + + + G+ TG Sbjct: 541 SRIDQAPENLKSLTEFGITTT-RQGTLEINYDMLDRQLNNNFNELEKFFGGN---TGFAK 596 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT------- 441 I + TG I+ +++ +L D A R++ R +FT Sbjct: 597 RIEDAIHGITGITGSIRTREKSLTEQNYRLNDDQAALDRRMEGLEKRTHAKFTAMQDATG 656 Query: 442 ----QLDVLMTSL 450 QL LM++L Sbjct: 657 KMQGQLGALMSAL 669 >UniRef50_C6BZV2 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZV2_DESAD Length = 574 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 42/272 (15%) Query: 137 DPITIDISAANSSLSGIRDAIN---NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTL 193 + IT+D++A ++ + D IN + ++AS+I+ G+ Y + + DTG DNA+ L Sbjct: 153 EEITMDVTAGTTAQE-LVDQINSDPDFDNKITASLISDGSN-YYIKFSGEDTGADNAVVL 210 Query: 194 SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA------IENSSNTISDALEN 247 + L + GY+AS+ +N + AQNAQ+ V+ IE SNT+ D ++N Sbjct: 211 T-----DLSAIDGYNASSFTN----TQTAQNAQMKVDGFPSGSGNWIERPSNTVDDVIDN 261 Query: 248 ITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQS 306 +TL LN VT + ++ DT I+ +V+ N L+ +T AD Sbjct: 262 MTLTLNAVTDESGINVGVSYDTDAMIETIETFVSEVNQLLYDLLDVTGEL-----ADEDD 316 Query: 307 SSNGALLGDSTLRTIQTQLKSML-----------SNTVSSSSYKTLAQIGITTDPSD--- 352 + + D+TL + +K L S T Y +L+ IGITTD ++ Sbjct: 317 DGSTVYIKDATLGLVYDSVKDALTSAGLGFLYYDSETGKGDMYASLSAIGITTDSTEGSS 376 Query: 353 --GKLELDADKLTAALKKDASGVGALIVGDGK 382 G+LE+D D+L AL D V L +G+ Sbjct: 377 TFGQLEIDYDELEDALAADPEAVAMLFAANGE 408 >UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 Tax=Yersinia enterocolitica (type O:9) RepID=A8KHX5_YEREN Length = 422 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 112/429 (26%), Positives = 194/429 (45%), Gaps = 70/429 (16%) Query: 51 KSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGN--AIAGKYTISVTHLAQAQTL 108 KS LT F+TA L K + + TS++ AT + N A+ G Y+ V LA A L Sbjct: 42 KSGLTAFRTALKDLGKVEEGLLKNKTSTSIKEVATVSANEKALKGNYSFFVEQLASAHQL 101 Query: 109 TTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSA 166 D TA+ L + G+ ++++ +L+ + AINNAK GV+A Sbjct: 102 AYTGLTD---TAVKAEQGPLDLTVNGES--FSVELKKV-ETLADLAHAINNAKDNPGVTA 155 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 S++ NG+ L +TS+ +G N + S G+ A S N ++ +AQ++ Sbjct: 156 SVVR-SNGQQILLLTSDKSGAANKIEFS--GNSP--------AIFSGNSPKLLSSAQDSV 204 Query: 227 LTV----NNVAIENSSNTISDALENITLNLNDV-TTGNQTLTITQDTSKAQTA--IKDWV 279 + + N+ IE+SSNT+ ++ +T+ L G+ L I + AQT IK ++ Sbjct: 205 VYIGDPSQNLKIESSSNTLDKVIDGVTIELTKAQKAGDPLLEIKVEVEPAQTETQIKKFI 264 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 +A+N GA S SN + DS ++ L S++ K Sbjct: 265 DAFN-----------------GAKSAVGSNNS---DSLSTALKQNLNSLVGKVYGG---K 301 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 TL IG++ D +G L+LD+ KLT LK + + L+ G G+ + L +L+ Sbjct: 302 TLGMIGVSFD-RNGDLKLDSKKLTEVLKTSPTLITDLMSGS---DGLIKKLDKALDPYLN 357 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDR----IDAQVARYKE----QFTQLDVLMTSLN 451 A+DG K +++ + +R ++ AR + +F +L+ ++ ++ Sbjct: 358 -------ASDGSLKMRSEMLATRKISLERNKEGLENSYARVLKTNLLKFNRLNEMIDKMD 410 Query: 452 STSSYLTQQ 460 ST + +Q Sbjct: 411 STMNMFNEQ 419 >UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BD21_SANKS Length = 460 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 113/467 (24%), Positives = 209/467 (44%), Gaps = 34/467 (7%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGL S +++ L + T + + ++ A ++A L + +++ +K Sbjct: 7 GMISGLKTSELINQLMQVEAMPQTMLKQKVTTTQAFITALQGLNTRVSSLADVAKTAAKP 66 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 + + AT+ +SS T+ TT+ + + +V LA+ QT + D Sbjct: 67 ESWQATTASSSATSVKVTTSAGSQPSTLSFTVDRLAKPQTSVSAAVTDLDSYFPDGVPEN 126 Query: 128 LTIQQGGDKDP--ITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDT 185 LTI G P +T+D+ A + L+G+ +N A +G++AS++ V E RL +T T Sbjct: 127 LTIVSGPASKPTLVTVDL-AGVTDLAGLATKLNAAGSGITASVVKVSATESRLQITGKST 185 Query: 186 GLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS-----VAAQNAQLTV-NNVAIENSSN 239 G+D A D D +A ++ + V V A +AQ+++ + + ++SN Sbjct: 186 GVDGAF------DIHRGKVTAEDLAAGASDLVVDRSTALVQAVDAQISLWDGTPVTSASN 239 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 T SD L+ ++ ++ V T+T ++ + D V + ++ +S T T Sbjct: 240 TFSDVLKGVSFTVSAVEATPVTVTTVRNDAALTKLASDLVGSVGVVLSEIASRTSTTTTT 299 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 + + G L GDS R I + + LS V S +++GIT + DG D Sbjct: 300 STDGRTVIAGGVLSGDSATRGIGQSITTALSYPVDGISP---SEVGITLN-KDGTFTFDQ 355 Query: 360 DKLTAALKKDASGVGALIVGDGKKTG-----ITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 K T AL KD V ++ G G++ I+ I +LT + + + SK Sbjct: 356 AKFTEALGKDPEKVQRVVSGLGERVADASKRISDPIDGSLT-------LKVKSQESFSKG 408 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 L + D++ R++ + + + + L+V ++ L S SS+L Q Sbjct: 409 LTEQVSDWD---RRLETRRSGLQRTYAALEVTLSGLQSQSSWLAGQI 452 >UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0K8_JONDD Length = 449 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 122/480 (25%), Positives = 210/480 (43%), Gaps = 71/480 (14%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQ---SSFTAKLSAYGTLKSALTTFQT 59 S+S G+ SGLD +SI+D + T + +Q +F A L A T S+LT + Sbjct: 2 SMSIGGIASGLDTASIIDQFMQVEAIPRTQLQTKQKTTETFVAALQALNTKVSSLT--EN 59 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 A A+ A F T+S+ + + +T A AG V LAQ ++ T D + Sbjct: 60 AAKAMKSAS-FDVWKGTASSDSVTVSTGTGAAAGTLEFRVDALAQGKS-TLSGVLADASS 117 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGEYRL 178 + D TI +G D T I+ +SSL+ + AIN +A++GV A+I+N +G RL Sbjct: 118 LLTGGD--FTITKG---DGSTHTITPVSSSLADLASAINSDAESGVKATIVNTTDGS-RL 171 Query: 179 SVTSNDTGL-DNAMTL-SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT------VN 230 +T+ TG D A T+ S + + S G AQ+AQ+T + Sbjct: 172 QLTATKTGATDGAFTITSGTAEAGFSSIRG---------------AQDAQITLWPSLGLP 216 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQ---TLTITQDTSKAQTAIKDWVNAYNSLID 287 + ++SNT SD + + + + V+ T+ + +DT + V N +I+ Sbjct: 217 GSTVTSASNTFSDVMAGVNVTVTKVSAPTDDPITVDVAKDTEAVSKLANNLVAQLNQVIN 276 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 +S +K T + Q+++ G GDS R + ++L S V ++ ++IGI Sbjct: 277 EVASRSKVTTSTGSSGQQTTTGGLFTGDSATRQLVSRLTEAGSYAVDG---RSPSEIGIE 333 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 DG + +K A D +G A + T + T + + KA Sbjct: 334 I-TRDGTFTFNEEKFQEAFAADPAGTQAFL------TAVATRV----------ENVGKAT 376 Query: 408 TDGVSKTL-------NKLTKDYNAASD----RIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 +D +L L +DY + R++ + A Y + +T L+ +++L S ++ Sbjct: 377 SDKYDGSLTLRVQSQQSLVRDYGTQIESWDRRLEQRRANYVQIYTALESALSNLQSQGTW 436 >UniRef50_B3QDF4 Flagellar hook-associated 2 domain protein n=9 Tax=Bradyrhizobiaceae RepID=B3QDF4_RHOPT Length = 571 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 106/384 (27%), Positives = 187/384 (48%), Gaps = 38/384 (9%) Query: 14 DLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLK--------------SALTTFQT 59 D S++ S A+ A T IS + ++ AK+SAY TL+ +A+ Sbjct: 40 DWDSLIASAVNAKLAAATSISTKITANEAKISAYQTLQTDLSKLSSGLSSLATAVVNSLA 99 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 N ++A S+T S+++A S + + A G + ++++ +A + + T T+ Sbjct: 100 TNVFATRAATLSSTGDVSASSALSMSVSNGAATGDHALTISQIATSHKVMGTTQSSQTED 159 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 + L + G + I ++ SL I DA+N + V ASI+ V +G Y Sbjct: 160 LGYSGVFSLGLAGGYTANIIV----TSSMSLQDIVDAVNAQTSTTNVEASIVQVSSGAYE 215 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-ASSNGMEVSVAAQNAQLTVNNVAIEN 236 + +T D + S SG D L S D+S A +N ++ AQ A+ +++ +++ Sbjct: 216 MVLTGTKDAADITYS-SSSGTDILNSLGFTDSSGAFANVLQT---AQAAKFSLDGISMTR 271 Query: 237 SSNTISDALENITLNLNDVT-TGNQT-LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +N I+D L +T NL T TG+ ++I DTS+ Q+A+ +V YN+ D + Sbjct: 272 DTNDITDVLAGVTFNLLQATPTGSAINISIGTDTSQIQSALTTFVTNYNTYRD------E 325 Query: 295 YTAVDA-GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 A A +D +S + L GD T+R I T+L++ L+ TV S ++ +G++ + + Sbjct: 326 VIAQQATNSDGTASDSAVLFGDGTMRDITTRLEAALNTTVGGLS---MSDLGLSFNDQN- 381 Query: 354 KLELDADKLTAALKKDASGVGALI 377 +LELD L+ L + SGV L+ Sbjct: 382 ELELDTSTLSTILSTNLSGVTKLL 405 >UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI2_OCEIH Length = 493 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 116/494 (23%), Positives = 206/494 (41%), Gaps = 52/494 (10%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SG+D SI+ L A++ L + ++ + A+ + L+ + + Sbjct: 5 GLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLDMKLS 64 Query: 68 DLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTR--TTRDDTKTAIA-- 122 +++ +S+ + A AT A G Y+I+V+ LA + + D KT Sbjct: 65 STYNSKLISSTQSDAVKATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTLHEQG 124 Query: 123 -TSDSKLT-IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 T D + T + G++ T I ++ ++ ++ ++ + S N +L + Sbjct: 125 ITEDVEFTTFDKDGNEQTHTYKIEEGDTLKDLMKKVNDDKESPIRMSYDENAN---KLIM 181 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 + TG N + +++ Q AS + ME NA+ T NN A E S Sbjct: 182 ETTRTGQYNESGSEIEFNESSQF-----ASKFNLLMENETGGDNAKFTYNN-AYETESRD 235 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT------------ 288 +L +T D T GN TLT+ D + I +V+ YN +++T Sbjct: 236 NQYSLNGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQEEKYRD 295 Query: 289 FSSLT-----KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLA 342 F LT + T + + + +G L G+S+L ++ +TV+ ++K+L Sbjct: 296 FPPLTEEQKKEMTEREIELWEEKAKSGLLKGESSLSNGLFNMRESWYSTVNGDGAFKSLT 355 Query: 343 QIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVG--DGKKTGITTTIGSNLTSW 397 +IGITT + GKL +D L A+ D V L +G G+ + + + Sbjct: 356 EIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGDDRGLINRLENAVE-- 413 Query: 398 LSTTGIIKAATDGV------SKTLNKLTKDYNAA----SDRIDAQVARYKEQFTQLDVLM 447 ST G I V S TL K KD ++ R++ ARY QF++++ + Sbjct: 414 -STMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMERAI 472 Query: 448 TSLNSTSSYLTQQF 461 + +N SS L F Sbjct: 473 SMMNQQSSMLMSNF 486 >UniRef50_Q7MAM3 FLAGELLAR HOOK-ASSOCIATED PROTEIN 2 n=1 Tax=Wolinella succinogenes RepID=Q7MAM3_WOLSU Length = 682 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 52/347 (14%) Query: 153 IRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF-------M 205 + DAIN A +G SAS V NG +L + ND G + +TL + A QS + Sbjct: 356 VADAINTAASGYSAS---VENG--KLIINKNDGG-NVQVTLKGADGSAEQSASKKAIAAL 409 Query: 206 GYDASASSNGMEVSV---------AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT 256 G A + ++ +AQ+A+LT N +AI +N+I+D + ++L L V Sbjct: 410 GLTAGTHQSYVDFQTNTLKLDNIQSAQDAKLTYNGIAITRPTNSINDIVSGVSLELTAVH 469 Query: 257 TGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALL 313 + + + +T+D +++V+++N+L+D TKY D + G Sbjct: 470 KEDDSPAVIRVTRDNKAIYDEAQNFVDSFNALMDQLEQDTKY-------DVDTKIAGVFQ 522 Query: 314 GDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 GDS +R+I+ L ++LS T +L + GI+ + S G+L LD++KL A ++D Sbjct: 523 GDSDIRSIKNALNNLLSYT--DGDKNSLYKYGISLNES-GRLTLDSEKLQKAYEEDPDMA 579 Query: 374 GALIVG-----DGKKT---GITTTIGSNLTSWLSTTG-----IIKAATDGVSKTLNKLTK 420 A G GK+T GI T + +++ + + + TD + + TK Sbjct: 580 MAFFKGTAKTIGGKETEVKGIFTQFNETIDDYITGSNARLKLLETSLTDESKRLEEQKTK 639 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 DR D AR F D ++ +N + S L + SNS Sbjct: 640 AQKDLDDRYDIMTAR----FAAYDSMIAKINQSFSSLNMMIQQASNS 682 >UniRef50_UPI0001C3576C flagellar capping protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3576C Length = 943 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 69/357 (19%) Query: 155 DAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA-----LQSFMGYDA 209 DA NA + I+ NG+ +L++T G N T +SG DA ++ G D Sbjct: 604 DAFKNAVKEATGGIVEF-NGDNKLTIT----GGTNIAT--ISGTDAATSQFIKELFGTDN 656 Query: 210 SASSNGMEVSV-AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTI--T 265 S M + A QNA+LTV+ V +E ++NT L+ IT+ L T G+ +++ + Sbjct: 657 YTFSPQMTAQITAGQNAKLTVDGVTMERNTNTFE--LDGITMELTGTTGAGDPPISLITS 714 Query: 266 QDTSKAQTAIKDWVNAYNSLIDTFSSLT-------KYTAV-DAGADSQS----------S 307 +DT K ++K +V YN+LI+ +S KY + DA S S Sbjct: 715 RDTDKIIDSLKSFVEDYNTLIEELNSYVSEEATYKKYAPLTDAQKKEMSDREIELWEEKS 774 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS---DGKLELDADKLTA 364 G L DS + + + ++ +L ++V + L IGI T + +GKL +D D L + Sbjct: 775 KKGLLHNDSNVSSFLSDMRMVLYSSVEDAGL-ALYDIGIETSDNWRDNGKLVIDEDTLKS 833 Query: 365 ALKKDASGVGALIVGDGKKTGITTTI------GSNLTSW--------------LSTTGII 404 + +A + L K+ G+ + +N++S L T+ I Sbjct: 834 MVATNADNIRKLFTD--KEQGVAVKLQQAIREAANVSSGSPGSMVRYAGTKDVLITSNTI 891 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 +S+TL+KL Y + + RY +QF ++ ++++NS SS+LTQQF Sbjct: 892 YDEMKRISETLSKLNTKY-------ELERTRYWKQFNAMEQAISNMNSQSSWLTQQF 941 >UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 Tax=Clostridia RepID=A4XK51_CALS8 Length = 540 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 131/540 (24%), Positives = 215/540 (39%), Gaps = 114/540 (21%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--TANTALS 65 G+ SGLD SI+ L + QKA + Q + Y + +++F+ N LS Sbjct: 26 GLASGLDTDSIIQGLMSIQKARYNKLYQQHQLLQWQREDYMNMAKEISSFRDYIFNLKLS 85 Query: 66 KADL-FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT---TRTTRDDTKTA- 120 + F AT + T NA+ G Y I++ +A+ T+ T D K+ Sbjct: 86 SNFVKFKATGPAIDGGYINVTGTANALEGNYEITINSIAKPSTMVLSNISATFDKLKSNN 145 Query: 121 ---------------IATSDS---KLTIQQGGDKDPITIDI---SAANSSLSGIRDAINN 159 I T D KL+ Q D ITID+ S ANS + + +N+ Sbjct: 146 ISTLYVSISTQTDADINTLDYVTVKLSTTQPSTSDYITIDVTKFSDANSFAAELVSKLNS 205 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 G ++ + G +L VT+ TGL + L +GD L S+ + + Sbjct: 206 --TGTVSAYYDSTLG--KLLVTTKQTGLI-ELKLDRTGDQNL-----------SDLTDST 249 Query: 220 VAAQNAQLTVNNV-------AIENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKA 271 NA++T+N++ +++ S N+ S + + LN T G + T+++D Sbjct: 250 TQGTNAEVTINDLSRNVTYSSLKYSRNSFS--FLGMVITLNKDTAGTKVGFTVSKDIDAI 307 Query: 272 QTAIKDWVNAYNSLI-DTFSSLTK-----YTAV-----------DAGADSQSSSNGALLG 314 IKD++N YN L+ +S +T+ Y + D +++ G L Sbjct: 308 VNNIKDFINKYNELVSKIYSKITEKRNRDYPPLTEDQKAQMKEEDIKKWEEAAKKGLLNN 367 Query: 315 DSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITT----DPSDGKLEL-DADKLTAALK 367 D L + ++ L V SS + + GI T + +GKL + D KL A+ Sbjct: 368 DPILSSFLNNMRYYLYKAVPGLPSSLDVITEAGIETFSYFESKEGKLYIKDEGKLREAIS 427 Query: 368 KDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII----KAATDGVSKTLNKLTKDY- 422 + L T S+ + + GI+ K A D + K + K Y Sbjct: 428 NNLDAFVKLF----------TYTDSDPDTPIENQGILQRFYKLANDTLKKIYDTAGKPYF 477 Query: 423 ---------------------NAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 NA +R+ RY QFTQL+ L+ +N+ SS+L+QQF Sbjct: 478 TSYYDPNSYIGKQLRSIADQMNAEQERLKQIEDRYYRQFTQLERLIAQMNTQSSWLSQQF 537 >UniRef50_A6CX94 Flagellar capping protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CX94_9VIBR Length = 629 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 14/191 (7%) Query: 13 LDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D++S++ + A++ + ++S +SAYG LK +L T + + + F+ Sbjct: 1 MDINSMVSKIVDAERIPKQQRLDYERSKIDTGISAYGRLKESLDTMKNLMASFRQEKAFA 60 Query: 72 ATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 S TS + +AT + +AIAGKY + V LAQ+ + + +DTK KL I Sbjct: 61 LRSVNTSEESVVTATASTDAIAGKYAVDVLQLAQSHKIASDAIPEDTKFGPG----KLQI 116 Query: 131 QQGGDKDPITIDIS-AANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGL 187 G D + DIS +NS L+ + AIN A GV ASI+ NG RL V +N +G Sbjct: 117 SMGDD----SFDISLRSNSRLTDVVRAINGASDNPGVRASIVKDINGP-RLIVAANQSGA 171 Query: 188 DNAMTLSVSGD 198 ++A+ + V + Sbjct: 172 EHALIIDVDAE 182 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 17/198 (8%) Query: 214 NGMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTT-GNQT--LTITQDTS 269 NGM AAQ++++ ++ +A + + +N I A+E + L L T G++ + + D + Sbjct: 385 NGMSQVQAAQDSKVILDGIAELSSHNNVIEGAIEGVDLTLKGTTKQGDRPAEIGVEYDRA 444 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 + I+ +V AYN L+ AD + G L GDS +R+ ++LKS+ Sbjct: 445 SVRADIEQFVAAYNQFYQVSKELS-------SADPTTGQTGPLAGDSVVRSADSRLKSVF 497 Query: 330 SNTV--SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 S+ V + +TL + G+TT G LE++ L L + + +G G+ G Sbjct: 498 SSAVEGAPEGLETLTEFGVTTT-RQGNLEINYQMLDKQLNNNFNKLGEFFGGN---NGFA 553 Query: 388 TTIGSNLTSWLSTTGIIK 405 + + S TG I+ Sbjct: 554 KRVEDAIHSMTGATGTIR 571 >UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJR8_ACTMD Length = 430 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 129/471 (27%), Positives = 217/471 (46%), Gaps = 56/471 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA++ G+ +GLD +SI+ L + A T + +Q S+ +AY L + + + A Sbjct: 1 MAAVD--GLVTGLDTTSIISQLMQIEAAPKTRLQSQVSAQQRVQTAYQALNARMLAVKGA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 AL+ + A +SS+ A AT GN A+AG T S+T LA+A T + ++ Sbjct: 59 AEALNGDSTWQALKASSSSDAAVATATGNSAVAGSITFSITSLAKAHVATAQV----PES 114 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 AT S L + GG T + + + +G+ +A+N A GV A++I G+ R+ Sbjct: 115 GGATKGSGLEVTVGGK----TTHVDVTDDTAAGVAEAVNKAGLGVRATVITTTTGQ-RVQ 169 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +S TG + A T V+G M D + S G + ++ + T + ++ N Sbjct: 170 FSSAKTGAEQAFT--VAG-------MANDPTVLSQGSDATITVGDPATT--GYKLTSADN 218 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + L +T+ V + T+T T D+S + VNA N+ I T Y Sbjct: 219 NFTSVLPGVTVRATKVQN-DVTVTSTVDSSGIGDKVAALVNAVNAAISTAKGYDTY---- 273 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 D+ S + G L GD+ R +++ L + +S +S+ T++ G+ ++G+L D Sbjct: 274 ---DAASKTAGPLNGDTLARGLRSSLLTTVSG--GGTSFGTMSAFGVALG-TNGQLTFDK 327 Query: 360 DKLTAALKKDASGVGALIVGDG-----KKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 K AA + D V + DG KK IG + ++ STTG + A G T Sbjct: 328 AKFVAAFEADPEKVRTAVT-DGLVKPYKK------IGEDASN--STTGSLTVAVQGGDTT 378 Query: 415 LNKLTKDYNAASDRIDAQVARYK----EQFTQLDVLMTSLNSTSSYLTQQF 461 L +L N A D ++A K + ++ L+ M+ LN +S+L+ Q Sbjct: 379 LRRL----NTAISEWDTKLASKKVSLQKYYSTLETSMSKLNQQASWLSGQL 425 >UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=Vibrionales RepID=Q7MIM7_VIBVY Length = 701 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 14/203 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M S+ LG+ G+D++S++ + A++ I N+++ + +SAYG L+ +L T + Sbjct: 1 MMSLGPLGMSGGMDINSMVSKVVDAERVPKQQRIDNERARIDSSISAYGRLRESLDTMKN 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + F+ T+ + SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 61 LMANFRQEKAFAVRKVDTTDDSVVSATATTDAIAGKYAIDVLQLAQSHKVASDVLAEDDK 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKA--GVSASIINVGNGE 175 KL I GDK + D++ +A+S L + IN A GV ASIIN G Sbjct: 121 FGPG----KLQISL-GDK---SFDVNVSADSKLVDVVRGINGASKNLGVRASIINDVEGP 172 Query: 176 YRLSVTSNDTGLDNAMTLSVSGD 198 RL V S +G +N + + V + Sbjct: 173 -RLIVASTVSGKENQIRIHVDAE 194 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 34/268 (12%) Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTG 258 A +SF Y +GM Q+A + ++ VA + +++N I DA+E + L L VT Sbjct: 450 AQESFDTY------SGMTEVQQGQDAMVVLDGVAQLSSNNNIIEDAIEGVDLALKGVTPK 503 Query: 259 NQ---TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 N+ + + D + I+ +V AYN T +L+ G D + G L GD Sbjct: 504 NKAPAEIGVEYDRQSVRDDIETFVAAYNQFYQTSKALS-------GVDPTTGQKGPLAGD 556 Query: 316 STLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 ST+R ++LKS+ S + + + K+L + GITT G LE++ D L L + + + Sbjct: 557 STVRNADSRLKSVFSTRIEKAPENLKSLTEFGITTT-RQGTLEINYDMLDRQLNNNFNRL 615 Query: 374 GALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQV 433 G+ TG + + TG I+ +S+ +L + A R+ + Sbjct: 616 EEFFGGN---TGFAKRVEDAIHGITGVTGSIRTREKSLSEQNYRLVDEQAALDRRMGSLE 672 Query: 434 ARYKEQFT-----------QLDVLMTSL 450 R +FT QL LM +L Sbjct: 673 QRTHSKFTAMQDATSKMQGQLGALMNAL 700 >UniRef50_B5YGA9 Flagellar hook-associated protein 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGA9_THEYD Length = 440 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 124/475 (26%), Positives = 227/475 (47%), Gaps = 68/475 (14%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA + G+ LD +I+ +L ++ LT ++ Q++ AK+S+ L SAL Q+ Sbjct: 1 MADLYVSGLTGALDTETIISNLLKIKQQPLTQLTQQKALTQAKVSSLTNLYSALNGMQSF 60 Query: 61 NTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD--DT 117 T L+ + +FS TSS T+ +AT + +++V LAQ + R + D + Sbjct: 61 FTNLNISSIFSTKKATSSNTSVLTATATSDTPNLTMSLTVNKLAQTE---MRASTDGMSS 117 Query: 118 KTAIATSDSKLTIQQGGDK-DPITIDIS-AANSSLSGIRDAINNAKAGVSASIINVGNGE 175 T TS +T++ D + +T D++ +A +L + ++IN+A+ + ASI G Sbjct: 118 LTDTFTSSGTITLKYWKDNSNFVTYDVNYSAGQTLQDLVNSINSAQNDIKASIYYTGTS- 176 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS---NGMEVSVAAQNAQLTVNN- 231 YRL +T +D A + D A S++ +AS N +E AQNA LT+ + Sbjct: 177 YRLLLTESD-----ASNSTKETDTASSSYV-IEASGLPTELNSLETLQNAQNASLTIGSS 230 Query: 232 -VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + ++SNT S+ + + + + D TG+ T+TI++D S+ + + +V+ YNS+I + Sbjct: 231 TTPVTSASNTFSNIVTGLDITVKD--TGSATVTISEDYSQIDSTLNSFVSNYNSIISLIN 288 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP 350 S+T GA Q GDST+ TI+T + ML+ +++ I Sbjct: 289 SMT-----GKGAQFQ--------GDSTITTIKTGMVRMLNPLINAGL--------INYSD 327 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII----KA 406 +DG + +++D L++ + + ++ T + + + L W TG I K Sbjct: 328 TDGTISINSDTLSSLKSSNPEKLNEIL------TTLKDSFTNQLNGW---TGAINTYKKI 378 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ----FTQLDVLMTSLNSTSSYL 457 + ++ NK+T + + +Y+EQ + QL+ + +N SS L Sbjct: 379 GENQITNINNKIT--------NLQEYLTKYEEQLRKEYAQLESFINEMNQISSRL 425 >UniRef50_B9KJE9 Flagellar hook-associated 2 domain protein n=4 Tax=Rhodobacter sphaeroides RepID=B9KJE9_RHOSK Length = 551 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 GV A +++ G+G + L V S + G +A+ +V+ A +D +A++ +V +A Sbjct: 178 GVVARVLDKGDGTFSLGVVS-EPGAGSALRFTVAEGTAGNGLARFDTTATNLDAQVQ-SA 235 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 +A LTV+ + + SN I+D + TL ++ T+G +++++D++ A+ A+ V Sbjct: 236 TDALLTVDGITVARGSNEITDLVPGATLTVSGKTSGPAVVSVSRDSALAEAAMAYLVEEL 295 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT-- 340 N+ + +T +VD ++ G L+GDST+ ++ Q S+LS ++ K Sbjct: 296 NATLKIMRDVT-VRSVDG------TAAGDLVGDSTVEALKRQFSSLLSGPLTGHGEKPVY 348 Query: 341 LAQIGITTDPSDGKLELDADKLTAAL 366 L+Q+G++T+ DG L D + A Sbjct: 349 LSQLGVSTN-RDGSLSFDEEAFQKAF 373 >UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850952 Length = 496 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 119/507 (23%), Positives = 216/507 (42%), Gaps = 59/507 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF-QT 59 M+++ G+ SG+D SI+ SL ++ + + ++ + Y + + L F QT Sbjct: 1 MSTMRVGGLASGMDTESIVKSLMEVEQMKVDKLKQNKTYLEWQRDDYREMNTMLLNFDQT 60 Query: 60 ANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD-- 116 + + F+ T S +TA S + +IS+ LA L + R D Sbjct: 61 IFDGVFRQSTFTKKTVDVSDSTALSVKNINSTSEFTGSISIEQLATGSRLVGDSGRTDID 120 Query: 117 ------TKTAIATSDSKLTIQQGGDKDP----ITIDISAANSSLSGIRDAINNAKAGVSA 166 + T++ S ++ TI+ P + I SL+ + + IN +K GVS Sbjct: 121 PNTLLNSATSLNLSGTQ-TIRVATQGKPASEGVEISFDPTKESLNDVINKIN-SKTGVSM 178 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQS-FMGYDASASSNGMEVSVAAQNA 225 + G ++ V++++TG N +S +D+ + F + +A S ++ + NA Sbjct: 179 -YFDQATG--KIGVSADETGAGN-----ISLEDSTGTLFSSLNLTAGSTNLQTT-DGNNA 229 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNS 284 + T N + +E SSNT+S + + L L T+G + T + T DT + +V+ YN Sbjct: 230 RFTYNGLQLERSSNTVS--INGVELTLKKETSGAEVTYSSTTDTDSILKEVVKFVDEYNK 287 Query: 285 LID------------TFSSLTKYTAVDAGADS-----QSSSNGALLGDSTLRTIQTQLK- 326 LI+ + LT D + + G L GD+ L + +++ Sbjct: 288 LIEKMGDEVKERRSKEYKPLTDMEREGLSEDEIKKWEEQARKGTLYGDNNLSSALNKMRV 347 Query: 327 SMLSNTVSSSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDG-- 381 + S+ +S +LA+ GI T GKL +D DKL A+ D + + + DG Sbjct: 348 DIYSSVQGNSGLASLAEFGIKTSSNYLEQGKLIIDEDKLRQAISDDPNKLYETFMADGVT 407 Query: 382 -KKTGITT----TIGSNLTSWLSTTGIIKAATDG--VSKTLNKLTKDYNAASDRIDAQVA 434 + GI T+ + + G + D + + L + + + R+ Sbjct: 408 DAEQGIARRLRDTVKDTMGAIEQKAGKTSSGNDSFTIGRNLKNVDRQIDNWEQRLIDIED 467 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY QFT ++ ++ NS SSY+ QF Sbjct: 468 RYWRQFTAMEKMIQQSNSQSSYIMSQF 494 >UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLI5_EXIS2 Length = 520 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 140/533 (26%), Positives = 224/533 (42%), Gaps = 87/533 (16%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I G+ SG+D +++ L ++A + +S ++ + T + AY + L +TA Sbjct: 1 MAGIRLSGLASGIDTETMIKQLMQVERAPVDRLSQKKQTLTWQRDAYREMNRGLLDLRTA 60 Query: 61 --NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTR--- 114 + LSK + + T+T+S + T + A AG TI + LA A ++T TT+ Sbjct: 61 ASDMLLSK-NYIAKTATSSDASKVVVTASPGATAGSVTIDEIGQLASAASVTMTTTKGSS 119 Query: 115 DDTKTA----IATSDSKLTIQ---QGGDKDPITIDISA-ANSSLSGIRDAINNAKAGVSA 166 DT A ++ K+ IQ D I+ IS A LS + AIN + Sbjct: 120 SDTTLAASGMFNVTNGKVNIQINSFAADGKAISETISLDATQKLSDLTSAINGKTSLGMN 179 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD--ALQSFMGYDASASS-NGMEVSVAAQ 223 ++ N G +L +T +TG L+ +G D + + +G + S +G V + Sbjct: 180 AVYNDITG--KLVLTKTNTG-----KLNPNGADITVIDANLGTEKVNSQIDG--VGQDGK 230 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 NA+ T+ +E +NT + +T+ LN +T T+ DT +IK +V+ YN Sbjct: 231 NAKYTIGGQELEQRTNTFTQ--NGLTITLNGTSTTATTINTKLDTQANFDSIKKFVDKYN 288 Query: 284 SLIDTFSSLT---KYTAVDAGADSQSSS--------------NGALLGDSTLRT------ 320 LID + KY D+Q +GAL DS LR Sbjct: 289 DLIDKMNKKVREEKYRDFQPLTDTQRKELSEDEVKKWEEKAMSGALKNDSFLREGMDAFR 348 Query: 321 --IQTQLKSMLSNTVSSSS--YKTLAQIGI--TTDPSD-GKLELDADKLTAALKKDASGV 373 I +++ + S TV S S ++QIGI T+D D GKL++D KL L++ GV Sbjct: 349 SAISSKIDTGYSYTVDSKSVGLNYMSQIGITSTSDFRDGGKLKIDEAKLKKMLEEQPEGV 408 Query: 374 GALIVGDGKKT-----------------------GITTTIGSNLTSWLSTTGIIKAATDG 410 L D + G TT+ ++ G + A T Sbjct: 409 YKLFTADAPEPVKNPDGSITPNPGGLDGFVRQIQGFATTMRDKISKVAGLDGAV-ATTYR 467 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS----SYLTQ 459 + K+L L K D++ + Y +F ++ M NS S SYL Q Sbjct: 468 LGKSLADLDKSMVTWEDKLKTKENAYYRRFAAMEQAMNQANSQSATLASYLGQ 520 >UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=A7GYT4_CAMC5 Length = 591 Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 52/413 (12%) Query: 1 MASISSLGVGSGLDLSSILDSLT-----AAQKATLTPISNQQSSFTAKLSAYGTLKSALT 55 + SI++LG G+ + S++ D L A ++A + PI+++ + LK+ ++ Sbjct: 3 VGSITNLGFGT--NNSALNDELVNKLKKADEEAQIKPITSRIEKNEIRQKDLAALKTLVS 60 Query: 56 TFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 + +L+ L+ +S+ TA S T A + + V +AQ T + Sbjct: 61 NVNVSAKSLASETLYLKRQVSSTGTAASITAASGVSIQSFDLDVKQVAQRDTYQSSKFYS 120 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVG-N 173 T T + ++ G+K I + S ++ I D IN G + A I+NVG + Sbjct: 121 STSLLGLTQNGSFDVEINGNKYSIGVTKS---TTYQDIVDKINEVSGGNLQARILNVGGS 177 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDASA------------SSNGMEVS- 219 Y++ + S DTG T+ S D A + +G+D++ +S+G + Sbjct: 178 NPYQIMLQSADTGA--KQTIKFSNDTAGVLEKLGWDSNQIPVTDDSGNPVYNSDGTQKFT 235 Query: 220 --------VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKA 271 ++AQ+A N V + + NTI D +T+ L + TG + +I QDT+ Sbjct: 236 SNLEKNKLMSAQDAIFNYNGVNVTRTKNTIDDLRPGVTITLKE--TGKSSFSIGQDTTDV 293 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 A+++++ YN ++ T Y D + S G+ G S + +I++ + + Sbjct: 294 AKAVEEFIKDYNLMVTNLGIATNY-------DEEKGS-GSFQGRSEITSIRSTISRL--T 343 Query: 332 TVSSSSYKTLAQIGITTDPSDGKLELDADK--LTAALKKDASGVGALIVGDGK 382 T K L++ GI TD DGKL LD DK L+ AL + V +G K Sbjct: 344 TGQDDEGKALSKFGIITDK-DGKLMLD-DKNTLSKALSSNLEEVQKFFMGSSK 394 >UniRef50_B9L8E7 Flagellar hook-associated protein 2 n=2 Tax=Nautiliaceae RepID=B9L8E7_NAUPA Length = 568 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 5/204 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + ++SSLG+GSG+ ++D L A + A + P+ ++ K SA + +T +T Sbjct: 4 IGTLSSLGIGSGVLNYDLIDKLKQADEDAMVKPLEDKLDLLKKKESALSQFITIGSTVKT 63 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ LF+ ST+ + ++ + T + I+V+ LA+ + T + Sbjct: 64 DILDLADGSLFAKVSTSVNGSSVNVTANDGVEPQTFDINVSQLAENDVFQSNGFAS-TDS 122 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN--VGNGEYR 177 I S S LT+ G T + A +L +++AINNA AGV+ASII+ +G+ Y+ Sbjct: 123 IINNSGSDLTLSIGVGGVETTFSLKAG-GTLEDLKEAINNANAGVTASIIDTGIGDNPYK 181 Query: 178 LSVTSNDTGLDNAMTLSVSGDDAL 201 L + +N+TG DN + + SG D L Sbjct: 182 LVLKANNTGEDNYIQFNYSGLDDL 205 >UniRef50_A0RM69 Flagellar hook-associated protein n=3 Tax=Campylobacter fetus RepID=A0RM69_CAMFF Length = 607 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 54/272 (19%) Query: 137 DPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGNGE--YRLSVTSNDTGLDNAMTL 193 D I+I+A+ ++L I + IN A G + A ++NVG GE Y L + S D+G DN ++ Sbjct: 143 DSYEIEINAS-TTLEDIANKINEATDGKIQAKVLNVG-GENPYSLVIQSKDSGKDNEISF 200 Query: 194 SVSGDDA---------LQS--FMGYDASASSNGMEVSVA--------------------- 221 S D A ++S FM D S +S G ++++ Sbjct: 201 SYVQDSAGSIDNSKNLMKSLGFMFKDPSTTSPGEKLTMMTEDEIKDAALTDKTIDTSNLA 260 Query: 222 -----AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTA 274 AQNA N + I +N+ISD + +T+ LN V ++ I Q+T Sbjct: 261 SRLQTAQNAIFEYNGIEITRDTNSISDLITGVTIKLNKVDKEGESSNFDIKQNTEGIVQD 320 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 ++ VN+YN+L++ S T Y +S++ ++G G S + I++++ ++ N VS Sbjct: 321 VEGLVNSYNNLMNNLSVATSY-------NSETGASGTFQGVSEITQIKSKINQII-NGVS 372 Query: 335 SSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 K++ G++ SDG L+L+A KL AL Sbjct: 373 KDG-KSIQDFGLSL-SSDGLLKLEASKLKDAL 402 >UniRef50_B8FJS1 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJS1_DESAA Length = 1010 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 22/249 (8%) Query: 1 MASISSL-GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+S +S+ G+ SG D S++D L + T+ ++ +QS + +LS + +L + L +T Sbjct: 1 MSSTTSVSGLASGFDWRSMVDQLMEVEHGTVDLMTKKQSQVSNELSEWRSLNTRLLALKT 60 Query: 60 ANTALSKADLF--------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 A L+KAD F + +ST + S +T+ A++G Y I V LA AQ L++ Sbjct: 61 AAENLTKADDFYDYSSTMSTDSSTVDAEDLVSVSTSSTALSGTYNIKVEKLATAQKLSST 120 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA-----KAGVSA 166 + D + + + ++ + G IT A+ +L +RD INNA +G++A Sbjct: 121 SFTDSSTALGSGYEGEILLN--GKVVSIT-----ASDTLKDVRDKINNANSGSDPSGITA 173 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 SI++ G + RL +TS TG D + S D ++ F G+ S SS ++ AQ+ Q Sbjct: 174 SIVSYGTNDTRLVITSEATGEDGMGIANGSASDLIEKF-GFVDSVSSVKTSITGGAQSDQ 232 Query: 227 LTVNNVAIE 235 + AI+ Sbjct: 233 FDSSTQAIK 241 >UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=4 Tax=Thermoanaerobacteraceae RepID=B7R845_9THEO Length = 620 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 46/282 (16%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 Q+A T N V I +S+N ++ A N+TL + N TLT++ D K IK++V+ Sbjct: 336 GQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTASGQNITLTVSTDVDKIYNTIKNFVDT 395 Query: 282 YNSLI-DTFSSLT--KYTAVDAGADSQ--------------SSSNGALLGDSTLRTIQTQ 324 YN +I ++ LT +Y D Q + +G L D TL Sbjct: 396 YNDVITQMYTKLTEKRYYDYPPLTDEQKQAMKENDIKLWEEKARSGDLANDETLMRAYYS 455 Query: 325 LKSMLSNTVSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVG--- 379 L+ ++S+TVS +L+ IGITT GKL +D KL A+ + V + G Sbjct: 456 LRQVVSSTVSGVG--SLSSIGITTGQWYEGGKLYIDEAKLKDAIANNLDKVMQIFTGVYS 513 Query: 380 -DGKKTGITTTIGSNLTSWLST----TGIIKAATDGVSKTLNKLTKDYNAAS-----DRI 429 DG T ++ I L + G++ A + +++ T+ Y+ + I Sbjct: 514 SDG-TTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIREI 572 Query: 430 DAQVA-----------RYKEQFTQLDVLMTSLNSTSSYLTQQ 460 D ++A RY QFTQL++ + +N+ S++L QQ Sbjct: 573 DDRIAEMQKRLKDLEDRYYRQFTQLEIFVGQMNTQSAWLNQQ 614 >UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169342B Length = 505 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 136/528 (25%), Positives = 224/528 (42%), Gaps = 116/528 (21%) Query: 11 SGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLF 70 SG+D+ S++ +L A + + ++ +++ + + ++Y + S L F+ N LSK Sbjct: 7 SGMDIDSMIANLMKAHRQPINRMNQKKTLYEWQQNSYREVNSKLVDFRN-NKLLSKY--- 62 Query: 71 SATSTTSSTTAFSATTAGNAIA-----------GKYTISVTHLAQAQTLTTRTT----RD 115 T+SS A +GNA A G TI V LA + + + + R Sbjct: 63 ----TSSSFNTLKAAVSGNASAITAKATSKAATGTITIDVESLASSSRVKGKNSQLAGRG 118 Query: 116 DTKTA------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASI 168 D K A + D + +I+ G ++ID +L+ I IN N +AGV+A Sbjct: 119 DEKLADLEAAGVLKLDGETSIKING----VSIDFDPNTDTLNTIVQKINGNKEAGVTA-F 173 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLS---VSGDDAL---QSFMGYDASASSNGMEVSVAA 222 N NG+ +S+TS TG ++L ++G D L + G DA NG+E + ++ Sbjct: 174 YNPDNGQ--ISLTSKTTGT-KEISLGGSLLTGTDNLNLNEKIQGTDAKVVINGVEATYSS 230 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVN 280 Q +VN + + TL+ TGNQ ++ + D + IK ++N Sbjct: 231 N--QFSVNGIEV--------------TLH---AATGNQPSIVSTSLDADQIVETIKSFIN 271 Query: 281 AYNSLID------------TFSSLTKYTAVDAG-AD----SQSSSNGALLGDSTLRTIQT 323 YN ++ F LT D AD + + +G L GD LR + Sbjct: 272 DYNEVLKLLNDKVIEERYRKFPPLTDEQKKDMKEADIKLWEEKAKSGMLKGDPILRKAIS 331 Query: 324 QLKSMLSNTV------SSSSYK-----TLAQIGITTDP--SDGKLELDAD-KLTAALKKD 369 +L+S ++ + ++S K TLA IGI T GKL L + KL L+K+ Sbjct: 332 ELRSAMTTPIYLGPADATSEEKAKNSITLADIGIETGKWFEGGKLTLKNEAKLRETLEKN 391 Query: 370 ASGVGALIV----GDG---KKTGITTTIGSNLTSWLS----TTGIIKAATDGVS-----K 413 + A GD ++ G+ + +L L G + +TD S Sbjct: 392 PEKLMAFFTNRPSGDNPPQEQVGVFNKMVDSLKGTLKDISDKAGTSRYSTDKGSTLKDQS 451 Query: 414 TLNKLTKDYNAASDRIDAQVA----RYKEQFTQLDVLMTSLNSTSSYL 457 L K + N D+ +A++ RY QFT ++V + LNS S L Sbjct: 452 ILGKQIAELNKKIDQTNAKLKSIEDRYYRQFTAMEVALNKLNSQSGSL 499 >UniRef50_B0TE02 Flagellar hook-associated protein 2, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE02_HELMI Length = 433 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 107/401 (26%), Positives = 175/401 (43%), Gaps = 57/401 (14%) Query: 1 MASISSLGVGS--GLDLSSILDSLTAAQKATLTPISN---QQSSFTAKLSAY-GTLKSAL 54 + SISS+G G +S+++SL++ AT TP S+ + Y +++SA Sbjct: 2 VGSISSIGYSRHIGAYRTSLVNSLSSTAAATFTPFVPSITPGSTLLENRNRYLSSVQSAR 61 Query: 55 TTF----QTANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT 109 F + A ++F S + A + + A NA Y ++VT +A+AQ + Sbjct: 62 EQFVDLAKQARELAGGENVFDRRSVDAGGSAAITGSAAKNASFATYNVAVTQVAKAQQNS 121 Query: 110 TR---TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSS---LSGIRDAINNAKAG 163 +T + A ++ TI G +++D+S +S L + DAINNA G Sbjct: 122 GNAITSTALSGEAGFAAGTNQFTITGNGVNRILSVDVSVGDSGKTVLKKMADAINNAAVG 181 Query: 164 VSASIINVGNG---EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 VSA +++ +G + +L++T+ TG DN L+ + + + A S + Sbjct: 182 VSAQVVDTTSGGVMKSQLTLTAQKTGTDNTFALTDTSGNLV---------AVSGAGNQTT 232 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 AAQ+AQ VN VA + SN + + L L VT G+ + + D AI D + Sbjct: 233 AAQDAQYRVNGVAFTSHSNDVKLDGGKVNLTLKAVTVGDVAVKVGYDAK----AITDEI- 287 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT 340 NS + +F+ + AG LLG L + VS S Sbjct: 288 --NSFVKSFNGTSDLLRKKAG----------LLGS---------LSRGMERFVSESR-NA 325 Query: 341 LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDG 381 L +GIT P + L++DADKL + L + V + G G Sbjct: 326 LKDVGITVTPGN-TLKVDADKLKSTLADNPGRVEEAMAGYG 365 >UniRef50_Q0B0F5 Flagellar capping protein-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0F5_SYNWW Length = 893 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 73/300 (24%) Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWV 279 AQN + N + + +++I LNL +QT +T+T D A I+ +V Sbjct: 595 AQNLEFDTNEITL----------MDSINLNLQ-AANPSQTVRITVTNDIDGAIEKIEAFV 643 Query: 280 NAYNSLI-------------------DTFSSLTKYTAVDAGADS-----QSSSNGALLGD 315 AYN+ I +F LT D D + + +G L GD Sbjct: 644 EAYNTAIVYMNTELTERRYNARDKYGGSFPPLTAEQRKDMSEDEIKAWEEKAKSGMLRGD 703 Query: 316 STLRTIQTQLKSMLSNTV----SSSSYKTLAQIGITTDPS-------DGKLELDADKLTA 364 S L T + + ++ V S+++YK+LA IGI+T P+ GKLE+D DKL A Sbjct: 704 SILFTAYSSTRCAATDPVQGLASTNTYKSLASIGIST-PTFVRGSIEGGKLEIDEDKLRA 762 Query: 365 ALKKDASGVGALIVGD-------GKK-----------TGIT----TTIGSNLTSWLSTTG 402 AL+ D V L D GK+ GI + N+T+ G Sbjct: 763 ALEADPDKVMELFTLDKVITNEEGKEILDWNGNPLRNRGIAIRLYEAVNENITTITEKAG 822 Query: 403 IIKAATDG--VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + A D ++K + ++ + +R+ RY +QF ++ ++ NS S++L+QQ Sbjct: 823 LPSAKIDNSLLTKEIGRIDDRIKSYEERMQEMSERYWKQFAAMEKMVNYYNSMSNWLSQQ 882 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 10/175 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+S+ G+ SGLD +I+ + AQ++ + +++ K + T+ + L +TA Sbjct: 1 MSSLRIGGIASGLDTENIIKEMLKAQRSKIERKVQEKTILEWKRDDFRTVNTKLLALRTA 60 Query: 61 NTALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L D F+A SS + +AT A G Y + V +AQ TLT++ + +K Sbjct: 61 TFDLKLGDTFNAKKAASSNESILTATAKSTATPGTYDVRVKQVAQKATLTSQQSL-GSKE 119 Query: 120 AIATSDSKLTIQQ--------GGDKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 +++ ++ I++ G I +A +SL+ I IN+ G+ A Sbjct: 120 NVSSVAAQFGIEENTQIDFTLAGKNGEIPFSFTAGATSLADIVRIINDEDMGIRA 174 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Ent... 405 e-111 UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 T... 363 9e-99 UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=... 343 6e-93 UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Ent... 338 2e-91 UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Ent... 336 8e-91 UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax... 335 2e-90 UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 T... 328 3e-88 UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Prov... 326 1e-87 UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 T... 318 3e-85 UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yers... 318 4e-85 UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thio... 313 7e-84 UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 T... 312 2e-83 UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Ent... 310 8e-83 UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Ente... 308 3e-82 UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 T... 308 4e-82 UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2... 307 5e-82 UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:... 307 7e-82 UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 T... 306 1e-81 UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax... 305 3e-81 UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=A... 304 5e-81 UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=G... 301 3e-80 UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Fila... 299 2e-79 UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 T... 298 2e-79 UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 T... 298 3e-79 UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbio... 297 6e-79 UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pect... 297 7e-79 UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax... 293 1e-77 UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum ... 291 3e-77 UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarc... 288 3e-76 UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 T... 286 2e-75 UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID... 285 2e-75 UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 T... 283 1e-74 UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 T... 278 3e-73 UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 T... 276 8e-73 UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 T... 275 2e-72 UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bord... 274 3e-72 UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=P... 274 4e-72 UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 T... 273 9e-72 UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium pe... 269 1e-70 UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomon... 269 1e-70 UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alte... 269 2e-70 UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdello... 267 6e-70 UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 T... 266 1e-69 UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 T... 266 1e-69 UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 ... 266 1e-69 UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carb... 265 2e-69 UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 265 3e-69 UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protei... 264 4e-69 UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax... 262 2e-68 UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma p... 260 6e-68 UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax... 260 8e-68 UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfu... 256 1e-66 UniRef50_C5D7S5 Flagellar hook-associated 2 domain protein n=7 T... 255 2e-66 UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax... 254 5e-66 UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thio... 253 1e-65 UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Ocea... 253 2e-65 UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax... 252 2e-65 UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 T... 252 2e-65 UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 T... 252 2e-65 UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 T... 252 3e-65 UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brev... 251 4e-65 UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina Rep... 251 5e-65 UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacil... 249 2e-64 UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 248 2e-64 UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alterom... 248 3e-64 UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 T... 248 3e-64 UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betapro... 248 4e-64 UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 T... 248 5e-64 UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 T... 247 9e-64 UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodofe... 246 1e-63 UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 T... 245 3e-63 UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 T... 244 4e-63 UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Baci... 244 5e-63 UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax... 243 9e-63 UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 T... 243 1e-62 UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 T... 242 1e-62 UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photoba... 242 2e-62 UniRef50_Q9K6W0 Flagellar hook-associated protein 2 n=1 Tax=Baci... 241 3e-62 UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 T... 241 3e-62 UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 T... 241 4e-62 UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 T... 240 7e-62 UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax... 240 7e-62 UniRef50_D2LUB9 Flagellar hook-associated 2 domain protein n=1 T... 240 8e-62 UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 T... 239 1e-61 UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 T... 239 1e-61 UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=mari... 239 1e-61 UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paen... 239 2e-61 UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillu... 239 2e-61 UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax... 239 2e-61 UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Baci... 237 4e-61 UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp... 237 6e-61 UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 236 1e-60 UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n... 236 2e-60 UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17... 236 2e-60 UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD... 236 2e-60 UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Fi... 235 3e-60 UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 T... 235 3e-60 UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Jant... 234 5e-60 UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 T... 234 7e-60 UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas s... 232 2e-59 UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein,... 232 3e-59 UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 T... 231 5e-59 UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseu... 231 5e-59 UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 T... 230 1e-58 UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas p... 230 1e-58 UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 T... 229 2e-58 UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter k... 229 2e-58 UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadale... 229 2e-58 UniRef50_Q5ZVV2 Flagellar hook associated protein 2 FliD n=5 Tax... 229 3e-58 UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 T... 228 3e-58 UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament ca... 228 3e-58 UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejue... 227 4e-58 UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella mar... 227 7e-58 UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 T... 227 9e-58 UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 T... 226 1e-57 UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aero... 226 1e-57 UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curviba... 226 2e-57 UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 T... 226 2e-57 UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 T... 225 3e-57 UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacteri... 224 4e-57 UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 T... 224 5e-57 UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:... 224 7e-57 UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=G... 223 1e-56 UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 T... 222 2e-56 UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=B... 222 3e-56 UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 T... 221 4e-56 UniRef50_B0TH38 Flagellar hook-associated protein 2 n=1 Tax=Heli... 221 6e-56 UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein... 221 6e-56 UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1... 221 7e-56 UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnob... 220 7e-56 UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax... 219 2e-55 UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax... 219 2e-55 UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 T... 218 3e-55 UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphi... 218 3e-55 UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia ... 218 4e-55 UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Rein... 218 5e-55 UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus... 217 5e-55 UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 Fli... 217 8e-55 UniRef50_A6F9P0 Flagellar distal capping protein-like protein La... 217 1e-54 UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paeniba... 216 1e-54 UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 T... 215 3e-54 UniRef50_A4G682 Putative flagellar hook-associated protein 2 Fli... 215 3e-54 UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 T... 215 3e-54 UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkhol... 215 3e-54 UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=H... 215 3e-54 UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 T... 214 4e-54 UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. ... 214 5e-54 UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 T... 214 6e-54 UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Entero... 212 2e-53 UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 T... 212 2e-53 UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 T... 212 3e-53 UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagell... 211 4e-53 UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=g... 211 5e-53 UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n... 210 9e-53 UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UU... 210 1e-52 UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanth... 210 1e-52 UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cell... 209 2e-52 UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 T... 208 4e-52 UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 T... 207 5e-52 UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gamm... 207 8e-52 UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 T... 207 1e-51 UniRef50_C4G7B8 Putative uncharacterized protein n=1 Tax=Abiotro... 206 1e-51 UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 T... 206 1e-51 UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 T... 206 1e-51 UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 T... 206 1e-51 UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromo... 206 2e-51 UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD... 204 8e-51 UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 T... 202 2e-50 UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 T... 201 4e-50 UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 T... 201 6e-50 UniRef50_A3WGR1 Flagellar hook-associated protein 2 n=1 Tax=Eryt... 201 7e-50 UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorell... 200 8e-50 UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Cam... 200 8e-50 UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei g... 200 1e-49 UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=A... 200 1e-49 UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 T... 200 1e-49 UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 T... 199 2e-49 UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candida... 198 4e-49 UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax... 198 4e-49 UniRef50_C4L5M8 Flagellar hook-associated 2 domain protein n=1 T... 197 6e-49 UniRef50_Q9X0K7 Flagellar hook-associated protein 2 n=7 Tax=Ther... 197 1e-48 UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=P... 194 5e-48 UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 T... 194 5e-48 UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=... 194 5e-48 UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=C... 194 7e-48 UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterob... 193 1e-47 UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 T... 192 2e-47 UniRef50_Q63DA1 Flagellar hook-associated protein 2 n=10 Tax=Bac... 192 3e-47 UniRef50_O67805 Flagellar hook-associated protein 2 n=1 Tax=Aqui... 192 3e-47 UniRef50_A9VNE8 Flagellar hook-associated 2 domain protein n=20 ... 192 3e-47 UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=... 192 3e-47 UniRef50_Q73AL3 Flagellar hook-associated FliD, putative n=33 Ta... 190 6e-47 UniRef50_Q893U0 Flagellar cap protein fliD n=1 Tax=Clostridium t... 189 2e-46 UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 T... 189 3e-46 UniRef50_B7IQA2 Flagellar hook-associated protein n=10 Tax=Bacil... 188 3e-46 UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 T... 188 3e-46 UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=V... 188 4e-46 UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactob... 188 5e-46 UniRef50_A0Q000 Flagellar cap protein fliD n=1 Tax=Clostridium n... 187 7e-46 UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersin... 187 9e-46 UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax... 187 1e-45 UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 ... 186 1e-45 UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 T... 186 2e-45 UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=u... 185 2e-45 UniRef50_C4XHC1 Flagellar hook-associated protein 2 n=1 Tax=Desu... 185 3e-45 UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=B... 185 4e-45 UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacteri... 185 4e-45 UniRef50_B8DS30 Flagellar hook-associated protein 2 domain prote... 183 1e-44 UniRef50_C6QNN0 Flagellar hook-associated 2 domain protein n=1 T... 183 2e-44 UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Ca... 182 3e-44 UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 T... 181 4e-44 UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing pr... 181 5e-44 UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax... 180 7e-44 UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerot... 180 9e-44 UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 T... 180 1e-43 UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=A... 180 1e-43 UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 ... 179 2e-43 UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseu... 178 3e-43 UniRef50_C4V4Y4 Flagellar hook-associated protein 2 n=2 Tax=Sele... 176 2e-42 UniRef50_C4TU94 Flagellar hook-associated protein n=1 Tax=Yersin... 176 2e-42 UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 T... 175 3e-42 UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata... 174 5e-42 UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (Fli... 174 6e-42 UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=... 174 7e-42 UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 T... 174 8e-42 UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 T... 173 1e-41 UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain prote... 172 2e-41 UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Trep... 171 5e-41 UniRef50_A5L6M4 Putative uncharacterized protein n=2 Tax=Vibrion... 171 6e-41 UniRef50_Q2B1U4 Flagellar hook-associated protein n=2 Tax=Bacill... 171 6e-41 UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax... 169 2e-40 UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Liste... 169 2e-40 UniRef50_A6DX67 Possible flagellar hook-associated protein 2 (Fi... 168 5e-40 UniRef50_D1U369 Flagellar hook-associated 2 domain protein n=1 T... 168 5e-40 UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=V... 168 5e-40 UniRef50_A3DHJ1 Flagellar hook-associated 2-like protein n=3 Tax... 167 6e-40 UniRef50_A0LT48 Flagellar hook-associated 2 domain protein n=1 T... 167 1e-39 UniRef50_B7DR51 Flagellar hook-associated 2 domain protein n=1 T... 166 2e-39 UniRef50_B0RKG7 Flagellar hook-associated protein 2 n=1 Tax=Herb... 165 2e-39 UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Ca... 165 2e-39 UniRef50_C5A8U2 FliD n=2 Tax=Burkholderia glumae RepID=C5A8U2_BURGB 165 3e-39 UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=... 165 3e-39 UniRef50_A8ERB3 Flagellar hook-associated protein 2 n=1 Tax=Arco... 165 3e-39 UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 T... 165 3e-39 UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herb... 165 4e-39 UniRef50_UPI0001914446 flagellar capping protein n=1 Tax=Salmone... 164 9e-39 Sequences not found previously or not previously below threshold: UniRef50_C0GJK0 Flagellar hook-associated 2 domain protein n=1 T... 221 5e-56 UniRef50_B2A823 Flagellar hook-associated 2 domain protein n=1 T... 202 3e-50 UniRef50_C5VT88 Flagellar cap protein FliD n=1 Tax=Clostridium b... 177 1e-42 UniRef50_C2BUJ2 Flagellar hook-associated 2 domain protein n=1 T... 169 3e-40 >UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Enterobacteriaceae RepID=FLID_ECOLI Length = 468 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 468/468 (100%), Positives = 468/468 (100%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA Sbjct: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA Sbjct: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV Sbjct: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT Sbjct: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA Sbjct: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD Sbjct: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK Sbjct: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK Sbjct: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 >UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 Tax=Edwardsiella tarda RepID=D0Z9J1_EDWTE Length = 471 Score = 363 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 207/473 (43%), Positives = 296/473 (62%), Gaps = 7/473 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L LT +K LTP + QQSS+ AKL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKLTGVEKQRLTPYTTQQSSYKAKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+K D F+ T SS FS TT+ +A+ G Y I+VT LAQAQ+LT +T Sbjct: 61 SKDLAKTDAFTITKA-SSHDQFSVTTSASAVPGNYAINVTQLAQAQSLTAKTHATSQTDQ 119 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + ++ + LTI G I +S +SL+G+RDAIN + AGV AS+I + + EY Sbjct: 120 LGSAGASGRELTITVGEPPKETKISLSDEQTSLTGLRDAINKSNAGVKASVIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA--SASSNGMEVSVAAQNAQLTVNNVAIE 235 LSVT+ DTG + + ++VSGD L + YD +++NGM +V ++A++T+N + I Sbjct: 180 LSVTAADTGAKSNIKMNVSGDSKLAGMLNYDGHKDSAANGMAQTVEGRDAKMTLNGIDIT 239 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSN I+DA + +TL L VT Q L I+ D+ I DWV++YNSLIDTF+SLTK+ Sbjct: 240 RSSNKITDAPQGVTLELKAVTKDTQNLVISSDSEGVSKKIHDWVDSYNSLIDTFASLTKF 299 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 T V G ++++ +NG LLGD+TLR IQ+ +K ++S+ + + K L +GI+TDP GKL Sbjct: 300 TPVKKG-EAENFTNGPLLGDNTLRAIQSGVKGVMSSAQDNPNLKGLGNLGISTDPQTGKL 358 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +D KL A+ + V VG+GK TG+ + S + S++ G+I + T ++ +L Sbjct: 359 NIDDSKLKKAIDEYPGQVQNFFVGNGKDTGMANMVHSEIQSYIKNDGVIDSTTKSINNSL 418 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 L+ ++ + ID + RYK QF QLD +M LN TSSYLTQQF SNSK Sbjct: 419 QHLSDRIDSVNQSIDETINRYKAQFVQLDKMMAKLNGTSSYLTQQFNAMSNSK 471 >UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=4 Tax=Enterobacteriaceae RepID=C5BAA4_EDWI9 Length = 475 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 198/474 (41%), Positives = 285/474 (60%), Gaps = 9/474 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L +T ++ LTP NQQ S+ +KL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+K D F+ T S+ F+ TT NAI G Y+IS++ LAQAQ+LT +T D +A Sbjct: 61 SKDLAKLDTFTITKA-STHDQFNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSA 119 Query: 121 IAT---SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 T S +LTI G I ++ +SL G+RDAIN + A V ASII + + EY Sbjct: 120 QGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINKSGANVKASIIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--GMEVSVAAQNAQLTVNNVAIE 235 LS+T+N TG + + L+VSGD L + Y+ + +N GM+ +V Q+A+LT+N + I Sbjct: 180 LSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPIT 239 Query: 236 NSSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 SSN I+D + +TL L T Q L I+ D I +W ++YNSLIDTF +LT Sbjct: 240 RSSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALT 299 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 K+T V G + +NG LLGDSTLR IQ+ +K LS+ ++ + K + +GI TDP G Sbjct: 300 KFTPVKQGQAP-AFNNGPLLGDSTLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTG 358 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 KL +D KL + + V L +G+GK TGI + + ++ + G++ + T ++ Sbjct: 359 KLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRDYVKSNGVLDSTTRSINN 418 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 +L L+ ++ + IDA ++RYK QF LD LM+ LN TSSYLTQQF + S Sbjct: 419 SLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKS 472 >UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Enterobacteriaceae RepID=FLID_SALTY Length = 467 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 240/470 (51%), Positives = 327/470 (69%), Gaps = 6/470 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS L L +L LT +K LTPI+ QQS+ +AKL+AYGTLKSAL FQTA Sbjct: 1 MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTAL+KADLF +T +S+T +T A AG Y I+VT LA AQ+L T+TT TK Sbjct: 61 NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKINVTQLAAAQSLATKTTFATTKEQ 120 Query: 121 IA---TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + + I+Q G K+P+ I + ++S+ IRDAIN+A +G++ASI+ V E++ Sbjct: 121 LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +T+N +G DN M ++V GD L + YD++ ++ M+ V A+NA+L VN + IE Sbjct: 181 LVLTAN-SGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQ 239 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 SNT++DA + ITL L T + T+T+T+D +KA+ AIK WV+AYNSL+DTFSSLTKYTA Sbjct: 240 SNTVTDAPQGITLTLTKKVT-DATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTA 298 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 V+ G + S NGALLGDS +RTIQT +++ +N+ S+S++KT+A+IGIT D + GKL++ Sbjct: 299 VEPG-EEASDKNGALLGDSVVRTIQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKI 357 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D DKLT LK + + L+VGDGK+TGITT I + + S+L+ GII A D V+ TL Sbjct: 358 DDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADDGIIDNAQDNVNATLKS 417 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 LTK Y + S+ ID VARYK QFTQLD +M+ LN+TSSYLTQQF + S Sbjct: 418 LTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS 467 >UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Enterobacteriaceae RepID=FLID_XENNE Length = 489 Score = 336 bits (863), Expect = 8e-91, Method: Composition-based stats. Identities = 187/490 (38%), Positives = 256/490 (52%), Gaps = 31/490 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSG+DL S+LD L AA+K L P++ QQ+S+ AKL+ +GTLK +L ++A Sbjct: 1 MASISSLGAGSGMDLGSLLDKLQAAEKKRLEPLAQQQTSYKAKLTGFGTLKGSLEKLKSA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D + T T F+ +T A G Y I V LA+AQ+L + K Sbjct: 61 SEELKKFDKLNTTKTNGDHKTFTPSTDSKASPGNYEIEVQQLAKAQSLQSTEVSGVKKLL 120 Query: 121 IATSDSKLT--IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG------ 172 T I Q G+K+P+ I + +SL IRDAIN + V+ASII Sbjct: 121 GEQGKGTRTIIITQPGEKEPMKISLKDDETSLVEIRDAINKKEGNVNASIIKADENGTEE 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG---MEVSVAAQNAQLTV 229 G+ L +TS G + MT+ V GDD L + Y + G M V A NA+LTV Sbjct: 181 EGKSYLILTSKKAGTRSIMTIKVEGDDELGKLLNYTSDGKGGGSGAMTQKVGAANAKLTV 240 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTL------------------TITQDTSKA 271 N + IE +N I DA E I LNL V+ + + +++D Sbjct: 241 NGIPIERQTNEIKDAPEGIILNLKKVSETEEVIVKVNGEDKKIPRPKTEILVVSRDIEPM 300 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 + AIK WV++YN L TF SL K+ V G ++ S NGALLGD TL+ IQ+QL+ L Sbjct: 301 KEAIKKWVDSYNELQTTFDSLAKFKPVGKG-EAASKDNGALLGDGTLKGIQSQLRHQLFA 359 Query: 332 TVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 + TL ++GI DG LE+ +KL LK+ ++ V A +GDG K G T T Sbjct: 360 AQDVADIATLNKLGIK-QKLDGTLEISDEKLEKNLKEKSADVKAFFMGDGAKPGSTQTYN 418 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + G I AT+G++K L L + + IDA + RYK QFT+LD L+ SLN Sbjct: 419 LLKETLDGHEGTIATATEGINKRLKTLERQVEQTNRNIDATMERYKRQFTELDKLVNSLN 478 Query: 452 STSSYLTQQF 461 +TSS L Q Sbjct: 479 NTSSSLFQLL 488 >UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax=Gammaproteobacteria RepID=Q1QVX4_CHRSD Length = 458 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 178/468 (38%), Positives = 279/468 (59%), Gaps = 18/468 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M +I+SLGVGSGLDLS +LD L A+ A L PIS+Q+ S+ AKLSA+G L++AL + + + Sbjct: 1 MPTITSLGVGSGLDLSGLLDQLKEAESAKLEPISDQKQSYKAKLSAFGRLENALESLRES 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL K + F A S+ A + +T A+ G+Y + V+ LAQ+QTL + +D + Sbjct: 61 ATALGKPETFQALSSKMQGEAVTVSTDSTAVPGRYQVEVSALAQSQTLASSGFAEDAE-- 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG-EYRLS 179 +AT + TI ++ +I + A N++L G+RDAIN+ AG+SASI+N G+G RL Sbjct: 119 LATGELAFTI----GEEAFSITLDADNNTLEGLRDAINDQDAGISASIVNDGSGTPQRLV 174 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TS +TG N + +S + +F A +++ M +VAAQ+AQL+VN + I ++SN Sbjct: 175 LTSTETGEANQIGISSTDATLQAAFGFDAADPTASDMRQTVAAQDAQLSVNGIEITSASN 234 Query: 240 TISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 + AL+ +T +L + LT+++D + +I D+V+AYNSL DT +SLT + Sbjct: 235 RVEGALQGVTFDLQATHETGTSDALTLSRDDKAIKASINDFVDAYNSLQDTMASLTSF-- 292 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 D++S G LLG+STLR +++QL++ + N V Y+ L +GI+ GKLE+ Sbjct: 293 -----DAESGEAGQLLGNSTLRGVESQLRNAMGN-VGDGDYRLLGDLGISLTVE-GKLEV 345 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D D L A++ + V A G G + + L + L G + AT G+ ++ + Sbjct: 346 DDDVLDEAVEGNLRDVSAFFEGSDGSDGFAAKLDAALGTMLDEGGSLDVATSGIDTSIER 405 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + Y + IDA +ARY+EQF LD ++ +NSTSSYLTQQF + + Sbjct: 406 VDERYTSMQASIDATIARYREQFADLDSMVAQMNSTSSYLTQQFNSLN 453 >UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 Tax=Gammaproteobacteria RepID=Q0AAT0_ALHEH Length = 477 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 146/486 (30%), Positives = 232/486 (47%), Gaps = 38/486 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASISSLGVGSGLD+ ++D L AA++ + Q+S A++S G L+ A+T F Sbjct: 1 MASISSLGVGSGLDIRDLVDQLVAAERQPGQNRLDRQESRLEAQISGLGRLQQAITDFGG 60 Query: 60 ANTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT-----T 113 A +S F + TS+ +A S + +A G Y ++VT LAQAQ L T + Sbjct: 61 ALGNVSAESDFRSVVATSNNESAVSVSAGRDAPPGSYDVNVTQLAQAQRLATNSDLFEDV 120 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 D + + TI+ D T + +L +R AINN V AS+++ G Sbjct: 121 EDFSAGTTSLGTGSFTIEYQ-DGSAETFQLEEGADTLQDVRAAINNQSENVRASVVDDGE 179 Query: 174 GEYRLSVTSNDTGLDNAMTL-----SVSGDDALQSFMGYDASA----------SSNGMEV 218 G RL +TS +TG NA++ D L + +DA + + Sbjct: 180 GP-RLVITSRETGDQNAVSAITVDPDDPDSDPLLERLAFDAENLAEPDEDGVRAGDNFSQ 238 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 AAQ+A+L V+ + I N IS ++ +TL L+ V + + + ++ A +A+ D+ Sbjct: 239 LRAAQDAELFVDGLRITRPGNEISGVIDGVTLTLSAVD--SARINVAEEPGSAASAVSDF 296 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSS 336 V AYNSL T L + D +S G L GDSTLR++Q +L+ M+S + + Sbjct: 297 VGAYNSLQRTLGELNAF-------DPESGEAGELKGDSTLRSVQARLRQMISEPLPGAGG 349 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 +TLA +GITT DG LE++ +L AL ++ V L ++ G+ + + Sbjct: 350 PVQTLADLGITT-RRDGTLEINDARLDDALSENRLDVIRLFT--DEENGLAARLQGAVDE 406 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + +I + T+ + L L R+D AR QF+ +D ++ +N TS + Sbjct: 407 FTGRDSVINSRTESLQDRLAALAPQQERLDRRMDQLEARLIRQFSAMDSMIAQMNQTSEF 466 Query: 457 LTQQFE 462 L Q Sbjct: 467 LDNQLN 472 >UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Providencia RepID=D1NZG8_9ENTR Length = 478 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 168/475 (35%), Positives = 257/475 (54%), Gaps = 20/475 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA IS+LG+G+ LDL+ +D L A ++ L P++ Q++S+ A++SA+G ++S+L + A Sbjct: 1 MAGISTLGIGANLDLNVQMDQLEAMERRRLDPLTQQKASYDAQISAFGKMQSSLEKLKKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K + S T +F T G AIAG + ++VT LA+AQT+ T+ D+ + Sbjct: 61 AEDLKKYEDISTTKVNGEYKSFDVKTDGKAIAGVHDVTVTQLAKAQTVATKGHSDNKELL 120 Query: 121 IATS-DSKLTIQQGG---DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 ++ + +TI Q DKD I I + A ++SL I DAIN GVSAS+I + +Y Sbjct: 121 GNSAKERTITITQPSQKEDKDKIVIKLDAGSTSLIEIADAINKTDKGVSASVIKDKDNQY 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-----------SASSNGMEVSVAAQNA 225 L VTS G D+ ++++V GDD L + ++ ++GME V QNA Sbjct: 181 HLVVTSKKAGTDSRISINVEGDDQLAKVLNVESVIDDKGNVTIKDKDTSGMEQKVPPQNA 240 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYN 283 +L ++ +E+ +N D +TL+L + + L I++D A+ IK WV+AYN Sbjct: 241 ELIIDGFELESQTNEAKDLFPGLTLSLKKESEEGKADHLIISEDIEPAKVKIKAWVDAYN 300 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQ 343 + LTKYT G +NG L+GDSTLR IQ+ L++ + + +S L + Sbjct: 301 EFQNLAKELTKYTPNKNGTTPDK-TNGPLIGDSTLRVIQSTLRTHVRSPQNSGELNLLNK 359 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TG 402 +GI DG LE+D KL AALK + S V GDGK+TG T L L T G Sbjct: 360 MGIK-QKLDGTLEIDNKKLDAALKDNPSSVKTFFAGDGKETGFATENFKFLKETLDTKEG 418 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + ATDGV + L K + +I+ + ++ QF LD +M+SLNST++ L Sbjct: 419 TLHNATDGVQRKKKSLDKRIEQTNKQIENTMDMHRRQFQNLDKMMSSLNSTTNSL 473 >UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAR2_THASP Length = 447 Score = 318 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 167/463 (36%), Positives = 265/463 (57%), Gaps = 20/463 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +IS+ GVGSGLD+ SIL+ L A ++ L+ + QQ S+ +KLSA+G L+SA++ Q A T Sbjct: 2 AISAAGVGSGLDVGSILNQLMAVERQPLSRLQEQQKSYQSKLSAFGQLQSAMSKLQDAAT 61 Query: 63 ALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K+ FSAT+ ++ T AF+ ++ +A G Y I V+ LA+AQ T T + Sbjct: 62 ALTKSSTFSATTASAGDTKAFTVSSTASAQTGSYNIEVSQLARAQRTATSATTAPDLSGG 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + D L G P T++++A +L +RDAIN A AGVSA I+N G +L ++ Sbjct: 122 GSIDITL-----GTGTPKTVNLAAGG-TLQDLRDAINAADAGVSAQIVNNGT-VNQLVIS 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S +TG +A L G S +D +A + M A++A+L+++ +AI SSNT+ Sbjct: 175 SKETGAASAFKLEGFGG---LSEFSFDPAAPAGDMVSVQQAKDAKLSIDGLAITRSSNTV 231 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 SDA+E +TL L T T+T+ ++ A+ AI D+ AYN L S T Y Sbjct: 232 SDAIEGVTLTLAKPTESETTMTVARNDETAKKAIDDFAKAYNELNSLIRSQTSY------ 285 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT-LAQIGITTDPSDGKLELDAD 360 ++++ G L GD+ +R+IQ+QL+ + +N +S S T L+ GI+ +DG + +D+ Sbjct: 286 -NAETKKAGTLNGDTGVRSIQSQLRGVFANPISGLSGATMLSDAGISI-RTDGSMSVDST 343 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KL +AL + + L G+G G T+ + + L+T G++ + TDG+++T+ Sbjct: 344 KLASALADPSKKIAELFAGNGTVDGFAKTLETRIKDMLATDGLLTSRTDGINRTIKSFDS 403 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 A R++ ARY QFT LD M+S+++TS+YLTQQ N Sbjct: 404 RIEAFELRLEKVQARYSAQFTALDAAMSSMSTTSAYLTQQLAN 446 >UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yersinia RepID=C4UKG1_YERRU Length = 469 Score = 318 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 219/472 (46%), Positives = 301/472 (63%), Gaps = 13/472 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSGL LS +LD+L++A++ L P++ QQ+S+ KL+A+G L+SAL +TA Sbjct: 1 MASISSLGAGSGLQLSELLDNLSSAEQKKLVPLTQQQTSYKGKLTAFGVLQSALAKVETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL KA+ + TS +SS TAFSATT A AG Y+I+V LAQ+Q+L + + T Sbjct: 61 AAALKKANTINGTSVSSSNTAFSATTDSAASAGSYSITVEQLAQSQSLLSAKMPNATDKL 120 Query: 121 IATSDS-KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++S LTI Q G K P+ + ++ +SL+ IRDAIN + V+ASI+ + Y LS Sbjct: 121 GNDNESRTLTITQPGQKKPMEVVLTKDQTSLTDIRDAINKKEGNVTASIMKGDDNSYYLS 180 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDA------SASSNGMEVSVAAQNAQLTVNNVA 233 +TS TG ++ MT+SV+GDD L + Y + S M +V A +A+LTVN ++ Sbjct: 181 LTSKTTGTESEMTVSVTGDDDLSKVLSYTPEPAGGSGSGSGAMTQTVKAADAKLTVNGIS 240 Query: 234 IENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 I SN I+DA E +TL L T +TL + D+ + AI+ +V+AYNSL TF+S Sbjct: 241 ITRQSNVITDAPEGVTLTLKSKTKAGEPETLNVVHDSKPTKDAIQAFVDAYNSLQTTFTS 300 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 LTKYTAV+AGAD QS+SNGAL+GD TLR IQTQLKS L+++ + KTLA +GI T Sbjct: 301 LTKYTAVEAGAD-QSTSNGALVGDGTLRNIQTQLKSQLASSQAG-DIKTLASLGI-TQEI 357 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDG 410 GKL++D+DKL ALK + V GDG+ TG T + L L T+ G +K ATDG Sbjct: 358 SGKLKVDSDKLDKALKDKPNAVTQFFAGDGENTGFATKMDKLLNDALDTSKGTLKNATDG 417 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++K+L L K + + I+A + RYK QF QLD L+TS NST S LT QF+ Sbjct: 418 INKSLKNLDKQVVSTTANINATIERYKIQFAQLDKLVTSFNSTGSMLTAQFK 469 >UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT45_THISH Length = 458 Score = 313 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 150/468 (32%), Positives = 257/468 (54%), Gaps = 25/468 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLG+GSGLDLS++++ L AA++ + + +++++ A+LSA+G++K L++ +TA Sbjct: 2 AISSLGIGSGLDLSALVNQLVAAERQPVESRLFRREANYQAQLSAFGSIKGGLSSLETAL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L T+++S + +A G+YT+ V LA A+T + DD T + Sbjct: 62 GKLVDLKE-GRTASSSDNARLGVSAQESAFPGRYTVRVETLATAETRAS-LAFDDADTVV 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + L + GD + + I I N++L GIRDAIN ++AGV ASIIN G G RL +T Sbjct: 120 GSGSLSLQV---GDGELVNITIDEDNNTLRGIRDAINASEAGVQASIINDGTGA-RLVLT 175 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S TG N + L+VS DD + + + +SN ++V AA +AQ +N + + + SNT+ Sbjct: 176 SGTTGAANTINLTVSDDDGDDTDLSGLSRLASNNLDVVTAAGDAQAQINGLTVTSPSNTL 235 Query: 242 SDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 A+E +TL L + ++T+ ++ + ++AI ++V AYN+++D LT+Y Sbjct: 236 DGAIEGLTLTLRGESEPGTSITVEVGKNRAAVRSAINEFVTAYNAVVDQVRELTRY---- 291 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSML--SNTVSSSSYKTLAQIGITTDPSDGKLEL 357 + ++ L+GDSTLR I+++L S L S + S + L +GI +D +GKL L Sbjct: 292 ---NPETQQGAVLVGDSTLRGIRSRLSSGLLASGGEAGSQFTNLVNLGINSD-RNGKLSL 347 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D+ L AL +D G L+ +++ + + + T G++ A TDG+ + Sbjct: 348 DSAALDRALDEDFQGAIGLL------NEVSSGLRDTVKGFTETGGLLDARTDGLLTRIRD 401 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + +R++ AR QF +D L+ L +TS YL+QQ + Sbjct: 402 IDRQREVLDNRMEQFEARLVRQFGAMDALVGQLQNTSQYLSQQLGALN 449 >UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 Tax=Nitrosomonas RepID=Q0AHH2_NITEC Length = 480 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 167/481 (34%), Positives = 259/481 (53%), Gaps = 30/481 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +SS G+GSGLD+S I+ L ++ LT ++ +++ A+LSA+G+LKSAL++FQ + A Sbjct: 2 LSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKA 61 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT----- 117 L+K LF+ +T + TT + +T+ AG + I V LAQAQ + + Sbjct: 62 LAKPALFTGFKATLTDTTVATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGN 121 Query: 118 ---KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 A T + T +K TI I A S+LS IR+ IN A GV+ASI+N GNG Sbjct: 122 GTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDIRNTINEANTGVTASIVNDGNG 181 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDAL------QSFMGYDASASSN--GMEVSVAAQNAQ 226 RL + S DTGL NA+ ++V D S + +DAS++ M +V A+NA+ Sbjct: 182 N-RLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSL 285 + ++ +A+E SSNTI+DALE +T NL G N TLT+ QD + +TA+K +V AYN L Sbjct: 241 MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNEL 300 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQI 344 + +L++Y D+ + L GDST+R +Q ++++ML+ S+ +L+++ Sbjct: 301 EKSIGNLSRY-------DTANKQASVLTGDSTVRMVQNRVRAMLTGNQSAVGGINSLSEL 353 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGD--GKKTGITTTIGSNLTSWLSTTG 402 GI+ DG L+LD KL+A L V A G T + L + G Sbjct: 354 GISFQ-KDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQLDQLLDGMARSDG 412 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 +I DG++ T+ + + A R+ R + QFT LD ++ S+ T++YL QQ Sbjct: 413 LINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLA 472 Query: 463 N 463 N Sbjct: 473 N 473 >UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Enterobacteriaceae RepID=A7FJ24_YERP3 Length = 466 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 228/469 (48%), Positives = 317/469 (67%), Gaps = 9/469 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASIS+LG GSG+DL+++L L+AA++ LTP++ QQ+S+ KL+AYG L+SAL +TA Sbjct: 1 MASISALGTGSGMDLNTLLSQLSAAEQTRLTPLTTQQTSYKGKLTAYGVLQSALAKLETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +TAL KAD ++T+ + S +AFSATT A AG Y+I VT+LA+AQ+L + T Sbjct: 61 STALKKADTLNSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKL 120 Query: 121 IAT-SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++ + +TI Q G K+P+ I +++ +SL+GIRDAIN + V+ASI+ + Y L+ Sbjct: 121 GSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVNASIMKADDNTYYLA 180 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS--SNGMEVSVAAQNAQLTVNNVAIENS 237 +TS DTG + MT+SV+GD+ L +F+ Y S++ S + V A++A L+VN V+I Sbjct: 181 LTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ 240 Query: 238 SNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SNTI+DA + +T+NL VT + LTI +D + + AI+ +V+AYNSL TF SLTKY Sbjct: 241 SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKY 300 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 T V+ G D QS+SNGAL+GD TLR+IQTQLKS L+++ S KTLA IGIT D DGKL Sbjct: 301 TVVETGQD-QSTSNGALVGDGTLRSIQTQLKSQLASSQSG-DLKTLASIGITQD-LDGKL 357 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGVSKT 414 +DADKL AL + V A VGDG+ TG T L + L TT G +K ATDG++ + Sbjct: 358 VIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALDTTLGTLKTATDGINTS 417 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 L L K A + I+ + RYK QFTQLD LMTS+NST+S+LTQQFE+ Sbjct: 418 LKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES 466 >UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Enterobacteriaceae RepID=C9XV84_CROTZ Length = 487 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 213/478 (44%), Positives = 312/478 (65%), Gaps = 14/478 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS L L+ + D L AA++ LT I+ QQS++ +LSAY L+S+L + QTA Sbjct: 12 MATISNLGVGSNLGLADLYDKLEAAEQTKLTVITKQQSAYNTQLSAYSKLQSSLQSLQTA 71 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K +++TS +S+ TAF+ATT +A+ G YT++V +A+AQ LT+ + T Sbjct: 72 TATLGKTATWNSTSVSSTNTAFAATTTSDAMTGDYTVNVKQMAKAQVLTSGSIASSTTQL 131 Query: 121 IATSDSKLT--IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 AT+ + T I Q G P+T+ ++ ++SL+GI AIN A VSAS+I +G++RL Sbjct: 132 GATTGTTRTVTISQPGTSKPLTVSLADGDTSLNGIAKAINKAGGNVSASVIKASDGDFRL 191 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +TS TG N MT++V+GDD LQ +G+D+S + + + A+QNA++ VN++ IE S+ Sbjct: 192 MLTSKTTGTTNDMTVTVTGDDTLQGIIGFDSSTKTGALSIQTASQNAKVVVNDIEIERST 251 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N ISDAL TL L +T N+TL++T+ T + A+ DWV AYNSL T +S+TKY V Sbjct: 252 NVISDALPGTTLTLKAQSTANETLSVTRATDANKKAVTDWVTAYNSLQSTIASVTKYVKV 311 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP------SD 352 D G D+QSSSNGAL+GDS +R+IQ+QL+S L+ V S S LAQ+G+T DP + Sbjct: 312 DKG-DTQSSSNGALIGDSNVRSIQSQLRSTLTQ-VQSGSVAILAQLGVTQDPVLAADGAA 369 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS----NLTSWLSTTGIIKAAT 408 G L++D KLT AL ++ V A VGDGK TG+ T + + L++ G+I+ A Sbjct: 370 GVLKIDDAKLTKALNENPDAVQAYFVGDGKTTGLATQMNNTLTSMLSTTTGKEGVIQNAK 429 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 D ++ TL L K Y + I+A +ARYK QF+ LD L++ LNSTS+YLT+QF ++S+ Sbjct: 430 DSINDTLKSLDKRYTSMEASIEATMARYKAQFSNLDSLVSKLNSTSTYLTKQFSSSSS 487 >UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAZ6_AMMDK Length = 462 Score = 308 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 133/480 (27%), Positives = 231/480 (48%), Gaps = 33/480 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA + +G+ SGLD SI+D L ++ + + +++ + +A+ + L Sbjct: 1 MADMRIVGIFSGLDTQSIIDKLMQLERKPIELLQQKEARLEQQKAAWQKIGQDLNALNAV 60 Query: 61 NTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ A ++A + TSS T+ +A + A G Y I+++ LAQAQ++ + D T Sbjct: 61 LFDLTLASTYAAKAATSSNTSVLTAQASNTAQPGTYNITISQLAQAQSVASGAFSDPTAA 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + T Q G + SL+ IRD IN A AGV+A+++ G YRL Sbjct: 121 LNLSG----TFQINGKSITV-----VTTDSLNSIRDKINAAGAGVTATVVLQQTGSYRLI 171 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TS TG A++ + +G S + +++ AQ+A TVN + + SSN Sbjct: 172 ITSQTTGSAGAISFVDDATTKVLQSLGILTSTGAIANQLT-PAQDAVFTVNGLQLTRSSN 230 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 T++DA+ +TL L + G+ TLT++ D + IK++V+ YN+L+ + TKY Sbjct: 231 TVTDAISGVTLKLQ--SLGSATLTVSTDVQAIKDKIKNFVDKYNALMQDIAEYTKY---- 284 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDPSDGKLEL 357 D + + G L+GD++L +Q+ L+ LS+ VS S Y +L+ IGITT L + Sbjct: 285 ---DPNTKTAGILMGDASLYQLQSSLRRWLSDFVSGLSYPYNSLSGIGITTSGEAPTLSI 341 Query: 358 DADKLTAALKKDASGVGALIVGD------GKKTGITTTIGSNLTSWL-----STTGIIKA 406 D KL+ AL + V L D + G+ + L WL + G ++A Sbjct: 342 DDTKLSQALSQAPDQVAKLFNADSGSAYPSQADGVAVRLRKILKLWLTGTGTTGVGFLQA 401 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + S+ + + + +R+ + +QF ++ + LN+ SS+L Q+F + Sbjct: 402 KDNYFSQEIRSIEDQIRSMEERLKVREQVLWQQFNAMEEFLAQLNAQSSWLAQKFAQLNK 461 >UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2 Tax=Photobacterium profundum RepID=Q6LTP9_PHOPR Length = 457 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 130/471 (27%), Positives = 229/471 (48%), Gaps = 30/471 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I + G SGLD++S++ S+ A++ I+ Q+ LSAYG LK +L T + Sbjct: 2 NIGAAGTASGLDINSMVKSIVDAERTPKESRINQQRDQVDVSLSAYGKLKGSLDTMKNLM 61 Query: 62 TALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + D+ SA S + + +A + AI GKYT++V LAQ+ + + + + K Sbjct: 62 ADFRRNDVMSARSVSIDNDEVLAANVSSEAIPGKYTVNVQQLAQSHKIVSSSFDEKEKI- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL++ GG P T+DI A S + + IN A GV AS+I NG RL Sbjct: 121 ---GAGKLSMALGGK--PFTVDIPADESKILDVVRLINRAPDNPGVMASVIKDDNGA-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI-EN 236 + S+ TG N++ +++ + G++ + +N M A ++++ ++ +A + Sbjct: 175 VLASDKTGEQNSIKVNIDAPAFSTLQKFGFNINNDANSMREMQPAVDSRVLIDGLASVTS 234 Query: 237 SSNTISDALENITLNLNDVTTGNQT----LTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 S+N+I DA+ + ++L +T G +T + + D ++ +I+ +VNAYN D L Sbjct: 235 STNSIEDAINGVDIDLKKLTDGVETPDVVVNVGYDRNQVGGSIEQFVNAYNQFFDVSQEL 294 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDP 350 ++ D +S G L+GDS +R+I QL+ +N V + S +TL+++GITT Sbjct: 295 GRF-------DPESKEKGPLVGDSIIRSITNQLRGAFANPVEGAPESIQTLSELGITT-T 346 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 G+LE+D D L ++ + VG G + G I + S+ TG IK + Sbjct: 347 MGGRLEVDYDIFDKQLDQNFNDVGEFF---GDQNGFARRIEDLIHSYTGITGSIKGRENS 403 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + +L D R++ R +QF +D M + S + Sbjct: 404 LNDQVMRLNTDQTNLDRRMEGVKQRTHDQFVAMDAAMGQMKGQLSSMMSMM 454 >UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN n=2 Tax=Cupriavidus RepID=Q46QZ5_RALEJ Length = 471 Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 196/479 (40%), Positives = 276/479 (57%), Gaps = 23/479 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS LDL+S+LD L A++A L I + +SF AKLSA+G ++S LT +Q A Sbjct: 1 MAAISALGVGSNLDLTSLLDQLKTAEQAPLDAIDKRATSFQAKLSAFGQVQSVLTAYQAA 60 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L A F A +T ST S TTA NA+ G Y+I+V LA AQ+L + D K Sbjct: 61 AKKLGDATTFGAVKATVGSTDIMSVTTASNAVPGNYSITVKTLATAQSLVSGQIADQ-KA 119 Query: 120 AIATSDSKLTIQQG--------GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 AIA + ++ G A N+SL IRDAIN A GV+ASIIN Sbjct: 120 AIAGTSGEIVFDFGEALAADPTATPTSTKKVTIANNASLQDIRDAINKAGVGVTASIIND 179 Query: 172 GNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 G+ YRL +TS+ TG M +S SG AL + +G+D SA++N ME V NA L VN Sbjct: 180 GSSTPYRLVLTSDKTGTQATMRVS-SGSAALNNIVGFDPSATTNAMEQKVPPANATLKVN 238 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + I + SN + DA + +T+NL G +LT+T+D +++I+ +V AYN++ T Sbjct: 239 GIDIVSQSNAVVDAGQGLTMNLTK--EGTTSLTVTRDYDSIKSSIQAFVTAYNNIQTTAK 296 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITT 348 SLT + D+ S+ L GD TLR+IQ +L+SML T+ + + LA IGI Sbjct: 297 SLTAF-------DTSKQSSSPLTGDGTLRSIQMRLRSMLGGTMPDGNGGSISLADIGIKF 349 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 D G + +D KLT AL + +GV A+ GI + + +T G +K A Sbjct: 350 DGKTGTMSVDDTKLTKALNNNLAGVTAMFSSTTGTGGIGKQVSGYVDGLSATNGSLKTAQ 409 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 DG++KTL L K+Y+ + DRI+ + RYK QFTQLD++++ +N TSSYLTQQF +N+ Sbjct: 410 DGITKTLKDLEKNYSDSQDRINTTMDRYKAQFTQLDLMVSQMNRTSSYLTQQFTALNNA 468 >UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 Tax=Enterobacteriaceae RepID=C6D975_PECCP Length = 474 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 202/484 (41%), Positives = 277/484 (57%), Gaps = 34/484 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L S+L L A+ L PI+ QQSSF A+LS LKSAL +TA Sbjct: 1 MASISSLGVGSGLPLDSLLTQLKTAENQKLVPITTQQSSFKAQLSGISALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+ ++ F ++T +S+ AFS TT A+AG Y+I V LAQA ++T+ Sbjct: 61 NDALAISESFGIVKGSIDGITSTKVSSTNKAFSTTTDSKAVAGTYSIDVKQLAQAHSITS 120 Query: 111 RT--------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + DTK I+ + K T + IDI A +SL+ +RDAIN Sbjct: 121 TAKTSATEPLSTTDTKLVISQDNGKFTKVGDDYLKYLEIDIKAGETSLNDVRDAINKVNG 180 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 V+AS++ + EY L +T+ ++G ++ +++ G D S + VAA Sbjct: 181 TVTASVVKAKDNEYYLMLTAKNSGTESKISI-----------GGDDTSVFNGTPTEKVAA 229 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVN 280 +NAQ+T N + IE SN ISDA E +T+NL T +TLTI QD + + IK WV+ Sbjct: 230 KNAQITANGIEIERQSNAISDAFEGVTINLLAQTETGKPETLTIEQDITGMKDTIKAWVD 289 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YK 339 AYN+L DT S+ TKYTAV+AG +SQ SSNGALLGDST+R IQ++LK+ L+ S ++ Sbjct: 290 AYNALQDTISAQTKYTAVEAG-ESQVSSNGALLGDSTVRGIQSKLKAQLTTVQSGGDEFR 348 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 LA +GIT + GKLE+ KL ALK++ V VGD KTG T + L L Sbjct: 349 ILADLGITQNFKTGKLEISDTKLEKALKEEPGRVRDFFVGDNDKTGFATQTRTYLKEVLD 408 Query: 400 TT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T+ G+IK DG++ +L KL D I++ +A Y++QF LD MT +NST S LT Sbjct: 409 TSEGLIKTKEDGINSSLKKLDTQAARVQDAIESTIAIYQKQFVDLDKAMTDMNSTMSRLT 468 Query: 459 QQFE 462 F Sbjct: 469 SMFS 472 >UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax=Cupriavidus RepID=Q1LBH5_RALME Length = 487 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 183/498 (36%), Positives = 272/498 (54%), Gaps = 41/498 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA++ LG+GS + L ++LD L A++ L + Q +++ AKLS YGT+KS L+ FQ + Sbjct: 1 MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQAS 60 Query: 61 NTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT-TRDDTK 118 +L+K D F A S++ + T NAIAG Y ++V LAQAQ+L + D Sbjct: 61 ANSLAKLDTFGAVKAQVSNSDVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQLKQDAI 120 Query: 119 TAIATSDSKLTIQQGGDKDP--------------------ITIDISAANSSLSGIRDAIN 158 T + + G D DP T+ I ++N +L GIRDAIN Sbjct: 121 IGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAKTVTIDSSNQTLQGIRDAIN 180 Query: 159 NAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--G 215 A GV ASIIN G+G YRL + S TG +M ++ S LQ+ GYD A G Sbjct: 181 KANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGS-SPELQALAGYDPVAGPQPGG 239 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 M+ V A NAQLT+N++AI ++SN ++DA + +T+ L TG ++T+TQD + A+ Sbjct: 240 MKEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKK--TGTTSMTLTQDLDSIKAAV 297 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 + AYN+L LT + D +S + AL GD LR IQ+ L+S+L+ + Sbjct: 298 QGLATAYNNLQSATKQLTAF-------DVKSGTKAALTGDGVLRGIQSTLRSVLNTPEAG 350 Query: 336 ---SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 + TLAQ+G+T DG + +D KL AAL + + V AL GDG K GI + Sbjct: 351 MRDGAATTLAQLGVTLQ-KDGTMSVDTKKLDAALAGNLADVTALFGGDGTKGGIARRLSE 409 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 + + T G + +AT G+ +++ L K Y++ S+ IDA + R ++QF LD+ ++ +N Sbjct: 410 AVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMNR 469 Query: 453 TSSYLTQQFE--NNSNSK 468 T YLTQQF NN+NSK Sbjct: 470 TKDYLTQQFSAMNNTNSK 487 >UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=Arsenophonus nasoniae RepID=D2TYE5_9ENTR Length = 469 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 151/475 (31%), Positives = 232/475 (48%), Gaps = 22/475 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++++ LG GSG+ + LD L ++ L P+ +Q + ++SAYG+L++ L Q A Sbjct: 1 MSNMTVLGAGSGMPIGEWLDKLENSENQKLNPLKQKQQKYDKQISAYGSLRAELDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K D + TS + + TT A AG Y + V LAQAQ L T T D K Sbjct: 61 AETLMKFDKITTTSVSKEHKTVAVTTDEKAAAGNYEVIVEQLAQAQALKTNTIDDVKKKL 120 Query: 121 IATSDSK----LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 S I+Q +K P+ I +S +SL IRDAIN VSAS++ + E+ Sbjct: 121 GGNVTSGQERIFVIKQNSEKQPLEIKLSDEQTSLREIRDAINKTDGNVSASLVKIKENEH 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 +L ++S TG + M + V GD L + SN M +VAAQNAQ+ +N + IE Sbjct: 181 QLVLSSKKTGTEAKMAIEVKGDSTLNAIFN------SNNMTETVAAQNAQVKINGINIER 234 Query: 237 SSNTISDALENITLNLNDVTTGNQ---------TLTITQDTSKAQTAIKDWVNAYNSLID 287 +N I DA E +T NL + + T+ IT+D + AIK WV+A+NSL Sbjct: 235 QTNEIKDAPEGVTFNLLKTSEKDTNNNNSPIAETINITKDIEPTKKAIKGWVDAFNSLHS 294 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 + + TKY G S++NG LL DS+ I +Q+K + N L GI Sbjct: 295 FYKNQTKYVPTKPGEAP-SANNGILLNDSSSAMIFSQVKDLTLNVQDMPDMNHLNHFGIG 353 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKA 406 + +GK+ +D KL ALK + V +GDG+K+G T L L G + Sbjct: 354 FN-HEGKITIDDKKLDEALKDSPAKVKQFFMGDGEKSGFATETFHYLKKTLDKLEGPLHF 412 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 T+ +++ L + I A + RY+++F +D ++++ +S+ L Sbjct: 413 TTESLNQQKKMLHLKMESVQTTIAATLKRYQKKFIAMDQAISNMKQSSNSLMALL 467 >UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICA8_VIBHO Length = 458 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 121/468 (25%), Positives = 239/468 (51%), Gaps = 29/468 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+GSG+D++SI++ + A+++ I + +SAYG LK++L T + Sbjct: 2 GVSATGLGSGIDINSIVNKIVEAERSPKQERIVKGLNDVETNISAYGRLKTSLDTMKDLM 61 Query: 62 TALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + + F+A ST SS A SA+ A+ G Y+I V LAQ+ L + DT Sbjct: 62 YDFRRNNTFAARSTVSSNEEAVSASADHQAVTGVYSIDVQQLAQSHKLVSDGLDADTDF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 +LT+ GG TIDI A +S+L + +IN++ G+ AS+IN +G RL Sbjct: 121 ---GAGQLTLSLGG--RTTTIDIDANSSTLLDVVRSINSSANNPGIKASVINDDSGA-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI-EN 236 + + TG +N ++++V+ + + Y+ ++++N M AA +A++ ++ +A + Sbjct: 175 ILGGDKTGAENQISVTVNAPVSSPLQALAYNPASATNSMNEMQAALDARILIDGLASVTS 234 Query: 237 SSNTISDALENITLN---LNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +NT SDA+ + ++ L G+ T+ + +D K + +++++V+AYN+ +L+ Sbjct: 235 DTNTFSDAIRGVNIDVAQLTSAPEGSVTIKVEEDRDKVKASLEEFVDAYNAFYQVTKALS 294 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDPS 351 KY D ++ G L+GDS +R+ Q++S+ S+ + + S +TL+++GI+T Sbjct: 295 KY-------DPETRQGGPLVGDSVIRSAVNQMRSLFSSPIEGAPNSLRTLSELGIST-TM 346 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 +G+LE++ D L L ++ + G+ G + + ++ G I+ + Sbjct: 347 EGRLEINYDLLDKQLTRNYGALEGFFGGN---QGFARKLEETVQNFTGVDGAIRNRETSL 403 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 +L + + R++ R +QF+ +D M + S + + Sbjct: 404 GDQRIRLQDEQDNLDRRMEDLENRTLKQFSAMDSAMAQMQSQLAAMMS 451 >UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Filament cap protein) (Flagellar cap protein) n=2 Tax=Erwinia pyrifoliae RepID=D0FQ35_ERWPY Length = 489 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 147/490 (30%), Positives = 246/490 (50%), Gaps = 29/490 (5%) Query: 1 MASISSLGVGSG--LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + G+GSG +D SS+LD + A++ L P +++++T ++SA+G + S+L+ Sbjct: 1 MAGFAIPGLGSGGTIDFSSMLDQIKMAEQQKLVPYDKRKTAYTGQVSAWGKISSSLSALS 60 Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + + + S+ AF AT A Y I V LA+A + T + D T Sbjct: 61 DNISKMGEDGFHG--VNVSTNKAFKATAKAGAQPDSYEIYVEQLARAHKIGTGSQADKTS 118 Query: 119 TAIATSDSKLTIQQG-GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 S T++ GD +P+ I+++ +SL I IN K V+AS+ G + Sbjct: 119 NLGDQSVDTRTLKITVGDGEPMEIELAKDQTSLEQIAKKINQEKGDVTASVRPTEEGGFT 178 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS----ASSNGMEVSVAAQNAQLTVNNVA 233 L +TS TG + + + VSGDDAL + +D + A SN M AQNA + ++ Sbjct: 179 LVMTSKKTGEEGQIAVEVSGDDALAGVLDFDPNVQPGAGSNAMSTVTEAQNAIMVIDGTR 238 Query: 234 IENSSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYNSLI 286 +E SSNTI+DA+E +TL L V+ + + L+IT DTSK + AI+++V YN+ I Sbjct: 239 LERSSNTINDAVEGVTLELQQVSEKDKDGEYAYENLSITSDTSKFKDAIEEFVKLYNAFI 298 Query: 287 DTFSSLTKYT-AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS--NTVSSSSYKTLAQ 343 S + + D + NG L+G+ TLR + ++ + N+ S + +LA+ Sbjct: 299 SASDSASAWNAPTDDAEGEANPGNGPLMGNGTLRRLTNDIRFITGSDNSQLSQVFSSLAK 358 Query: 344 IGITT---DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS- 399 +GI D GKL +++ KL A+K + + AL +G G+ GI + + +++ Sbjct: 359 LGIEVKVEDAGTGKLTINSSKLEEAVKNNPDEIEALFLGKGESEGIADKLQEMIKTYIGD 418 Query: 400 ------TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 TTGII T G+ + +++ + IDA V R ++ F +LD+ M +N+ Sbjct: 419 KDSIPKTTGIIGQTTKGLEEQTKQVSARMSQVQKMIDATVERNRKDFERLDLAMNKMNNM 478 Query: 454 SSYLTQQFEN 463 SS L+ Sbjct: 479 SSQLSSMLAG 488 >UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNY5_9GAMM Length = 452 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 128/465 (27%), Positives = 247/465 (53%), Gaps = 25/465 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLGVGSGLDL+ ++ L AA++ ++ ++ A++SA+G L S++ + Sbjct: 2 AISSLGVGSGLDLNQLVGQLVAAEREPKEQRLNQREERIDAQISAFGELTSSVDQVGSVL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LS + + +++ + + + T G+A +++ V LAQ+Q + + D+ Sbjct: 62 GDLSGFEP-TQSASVADDSVANVTVTGDAENSDFSLEVNQLAQSQIVASAAGDFDSADD- 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 +L IQ G + + +TID+ ++L +R+AIN+++AGV+ASI+N GNG RL ++ Sbjct: 120 EVGAGQLQIQVG-NGNAVTIDVEEG-ATLRDVRNAINDSEAGVTASIVNDGNGA-RLVLS 176 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 +N+TG DN ++++ + D D+S + + AAQ+A+ +N + + +SSNT+ Sbjct: 177 ANETGADNTISVTATEDPEGSGLGRLDSS----NLTETRAAQDAEAVINGLTVTSSSNTL 232 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 SD +E + + L V++G T+++++D + ++ ++ +V YN+LI + LT Y Sbjct: 233 SDTIEGLEIELTGVSSGPTTVSVSEDRDELESLLQSFVENYNALIGQTNQLTAY------ 286 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELDA 359 D + L GDST+R I+++L + L + S +TLA++GI ++ DG L D+ Sbjct: 287 -DPEEDEAAVLTGDSTVRGIRSRLGNALIQPAEGAGGSNQTLAELGIISN-RDGTLSFDS 344 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 + + A+++D I + S+ G+I+ DG+ L+++ Sbjct: 345 TRFSEAMERD-----GFENISDTVRNIAGQMRDVTDSFTGRDGLIQVRQDGLQSDLSRIE 399 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + RI+ A + QF+++D ++ + +T L Q N Sbjct: 400 RQREDLEARIERLEANWVRQFSRMDSMVAQMQATGDQLMAQLANT 444 >UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUC9_HALHL Length = 476 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 122/483 (25%), Positives = 228/483 (47%), Gaps = 33/483 (6%) Query: 1 MASI-SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 M ++ S + VGSG+D + ++ L A++A + ++ KL A G ++ + Q Sbjct: 8 MPNMPSQMDVGSGIDTNKMVQDLVRAERAPTEQRLDRREQELQEKLEALGQMRGTIGELQ 67 Query: 59 TANTALSKADLFSATSTTSSTTAFSA-TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 A L +S SS +A + + A G+Y + V LA+ Q L T + + Sbjct: 68 EAVQGLGDPSAYSGIDAESSNAGVAAVSASEEARPGQYDVEVEQLARTQRLATASGAFE- 126 Query: 118 KTAIATSDSKLTIQQG-GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 +A A +L I G G++ +TID + +L GIRDAIN G+ AS+++ G G Sbjct: 127 DSADAVGTGRLVITDGEGNEQAVTIDEESG--TLLGIRDAINAQAEGLRASVVDDGAGP- 183 Query: 177 RLSVTSNDTGLDNAM-----TLSVSGDDALQSFMGYDASASSNG-----MEVSVAAQNAQ 226 RL++ + TG NA+ D S + Y+ + +G + A +A Sbjct: 184 RLAIATEQTGRANAIAQIRAEQDPEDDQGNLSALQYNVADPQSGEPMGAFQEVRPASDAV 243 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 +T++ + I N I A+E TL+L + G ++I Q T A+ I+ V+++N + Sbjct: 244 VTIDGMQITRPENRIEGAIEGATLSLKE--EGRSRVSIEQQTGLAEENIQRLVDSFNQVR 301 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQ 343 + L+ Y D ++ G L GD TLR + +QL ++ V + +L Sbjct: 302 AQLNQLSDY-------DPEAEKAGPLQGDHTLRNLLSQLSRAVNEPVEALDGAPISSLGD 354 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGI 403 +G+ T+ DG L+LD +++ + + + V ++ ++G+ + + L + L + Sbjct: 355 LGVRTN-RDGTLDLDGERMQQMVGEHSELVTRMMT--DPESGVMSRLEGVLENALGRDSV 411 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 I TDGV L+++ D R++ + + + +F+++D + LN TS +L Q+ Sbjct: 412 IDMRTDGVESRLDRIADDRERLDRRMERREDQLRSEFSRMDSRVAELNQTSEFLEQRLAA 471 Query: 464 NSN 466 ++ Sbjct: 472 MNS 474 >UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K38_SYMTH Length = 476 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 116/482 (24%), Positives = 215/482 (44%), Gaps = 24/482 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+ G+ SG D +++ +L ++ + +Q AK A+ ++SALT Q+ Sbjct: 2 SMRLGGLISGADTETLISALLELERVRIYRQEEKQEQLEAKQKAWRDVRSALTNIQSKLD 61 Query: 63 ALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L LF + S + + T A YT+ V LAQ+ +TT++ K A Sbjct: 62 QLRFPTLFRSRKVELSDNSVATVTADAGAAQTSYTLQVVKLAQSHVITTQSEAA-YKAAD 120 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T G D + + +LS + IN A +GV A ++ V G++RL +T Sbjct: 121 EQLGWAGTFDIGTDPNALKTITVEETDTLSSLAAKINAADSGVLAHVVMVSEGKFRLVLT 180 Query: 182 SNDTGLDNAMTLSVS------GDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 + +G N + L + + + V AQ+A++ +N + Sbjct: 181 AAKSGSANVIRLENEVPGQPPQGQTYGNLLEDILGLTGANQLVLSEAQDAEIILNGEPYK 240 Query: 236 NSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +S+NT + L I + + + + ++T++ D K +KDWVNA NSL D L+ Sbjct: 241 SSTNTFDNILPGIKITVKKPSGDDVVSMTVSSDIDKIVQVVKDWVNAVNSLQDLLKKLSA 300 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSD 352 Y D + + AL G+S +R+IQ++++ S V+ +S K L+QIG++T Sbjct: 301 Y-------DVEKKTGAALTGESLVRSIQSRMRQFFSTEVAGMPASMKMLSQIGVSTGAYG 353 Query: 353 ----GKLELDADKLTAALKKDASGVGALIV-GDGKKTGITTTIGSNLTSWLST-TGIIKA 406 GK+ +D +KL L++D GV L + + GI + + S L + +G ++ Sbjct: 354 TADFGKIVVDEEKLREVLQRDPEGVARLFGLNEDGQKGIAVQMNDYIKSLLDSQSGALEV 413 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 +S+ ++++ +++ + + QF +++ M L +YL S Sbjct: 414 RDKSLSQQIDRIRDTIERIEVQLEQREKVLRLQFARMEEAMARLQGQGNYLALMLLGRSQ 473 Query: 467 SK 468 S+ Sbjct: 474 SQ 475 >UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pectobacterium atrosepticum RepID=Q6D6F5_ERWCT Length = 472 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 200/484 (41%), Positives = 275/484 (56%), Gaps = 36/484 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L+ +L L A+ L P+++QQSSF A+L+ LKSAL +TA Sbjct: 1 MASISSLGVGSGLGLADLLAQLRTAENQRLVPLASQQSSFKAQLTGVSALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+K++ F ++T +S+ AF+ TT A+AG +TI V +LAQA ++T+ Sbjct: 61 NDALAKSESFGIVKGSIDGITSTKVSSTNKAFTTTTDSKAVAGSFTIEVNNLAQAHSITS 120 Query: 111 RT--------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + DTK I+ + K T + IDI A +SL+ +RDAIN Sbjct: 121 AAKTSATEPLSATDTKFVISQDNGKFTKVGDDYLKSLEIDIKAGETSLNDVRDAINKVNG 180 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 V+AS++ + EY L +T+ ++G D+ +++S D VAA Sbjct: 181 TVTASVVKAKDNEYYLMLTAKNSGTDSKISVS-------------DNDGILGTTVEKVAA 227 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVN 280 QNA + N +AIE SNTISDA E +TL L T +TLTI QD + + IK WV+ Sbjct: 228 QNASIVANGIAIERQSNTISDAFEGVTLTLQAKTEASKPETLTIDQDITGMKDTIKAWVD 287 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYK 339 AYNSL DT +S TKYTAV+AG + Q++SNGALLGDST+R IQ QLK+ L+ + S ++ Sbjct: 288 AYNSLQDTINSQTKYTAVEAGEN-QANSNGALLGDSTVRGIQNQLKAQLTTIQTESDDFR 346 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 A +GIT + GKLE+ KL ALK++ V A VGD K G T + L L Sbjct: 347 IFADLGITQNSKTGKLEISDTKLDKALKEEPGKVQAFFVGDNDKQGFATQTRTYLKEVLD 406 Query: 400 TT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T GIIK DG++ TL KL + I+ +ARY++QF +LD MT +N T S LT Sbjct: 407 TNEGIIKNKEDGINSTLRKLDTQSTRMKNGIEDTIARYQKQFVELDKAMTKMNGTLSSLT 466 Query: 459 QQFE 462 F Sbjct: 467 SMFS 470 >UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R090_CHRSD Length = 441 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 162/462 (35%), Positives = 256/462 (55%), Gaps = 24/462 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI+SLGVGSGLDL+ +LD L A++ L PI QQ+ AK+SAYG L+ AL+ Q++ Sbjct: 1 MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+ +LF++ ++ + SA +A G+Y + VT LA A ++ T+ ++ Sbjct: 61 ASNLNDPELFNSVTSDVEGDSVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLN 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 S G IT++ A+S+LS +RDAIN + +GVSASI+ G+ + RL++ Sbjct: 121 AGAEASLDVTLNDGTAQNITVE---ADSTLSDVRDAINASDSGVSASIVFDGS-QSRLAI 176 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 S TG + + +F G D A E+ Q+A+L VN +AI + SN Sbjct: 177 ASESTGAEAGIN--------SVTFNGLDGLALDTATEIQ--GQDAKLDVNGIAITSDSNQ 226 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + +A++ TL+L++ TG T+T+ +D + AI +V++YNS+ T LT + Sbjct: 227 VEEAIQGTTLSLSE--TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSF----- 279 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 D++S G LLGD T R +TQL+S L+++V TL+ IGI+ + DG+LE+D + Sbjct: 280 --DAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSDIGISMNV-DGELEVDDE 336 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KL + + AL G G GI L + L G+++ A G + + +L + Sbjct: 337 KLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDE 396 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 Y++ D I + V RY+ QF +LD ++ +N TSSYLTQQ Sbjct: 397 RYSSMQDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQLS 438 >UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0G4_PELTS Length = 518 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 124/515 (24%), Positives = 224/515 (43%), Gaps = 55/515 (10%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SG+D SI++ L A++ L + + + Y L ++L TF+ Sbjct: 9 SSLRIGGLASGIDTDSIIEELMKAKRIPLQKLEQNKQILLWQQEDYRELNTSLRTFRDKV 68 Query: 62 TALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ +A + + +S+ +A A+ A+ G Y+++V LA ++ ++ D Sbjct: 69 FSMKLQATYMTKKAVSSNESAIGASAGTGAVPGIYSVTVNQLAAGVSVGSQAGLPDEANG 128 Query: 121 IATSDS-----------KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 + S ++ G K T + ++ + AIN A G+SAS Sbjct: 129 SGGTKSLADQFFGGVVKDISFTLEGSKGSKTFTFNTGTDNIYSVVSAINAAGLGISASYD 188 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME---VSVAAQNAQ 226 N R +T+ TG + ++ DD L G S ++ A Q+A Sbjct: 189 ATLN---RFFLTTTSTGAAAKIKVTNDTDDFLADAAGAGGSKLKLLLKDDGTVYAGQDAV 245 Query: 227 LTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 + + A + +S+NT++ + ITL L + T+T++ DT AIKD+V+AYN L Sbjct: 246 FSFGDAAGLTSSTNTVT--VNGITLTLKQGGGASSTVTVSNDTDAVFNAIKDFVSAYNDL 303 Query: 286 IDTFS---SLTKYTAVDAGAD--------------SQSSSNGALLGDSTLRTIQTQLKSM 328 I + S T+Y+ D + + +G L DS L +I +++ Sbjct: 304 IGKINGKLSETRYSDYLPLTDEQRKELTDEQEKKWEEKARSGLLRNDSLLESIVIKMRMT 363 Query: 329 LSNTV----SSSSYKTLAQIGITTD--PSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 +S V + Y +LA IGITT GKL +D DKL AL+KD GV L Sbjct: 364 MSAVVPGLSAGEGYNSLAGIGITTGSYSEKGKLYIDEDKLKEALQKDPEGVMNLFTKSSD 423 Query: 383 ---KTGITTTIGSNLTSWL--------STTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 + GI + ++ + + S + + + + ++ ++ + DR+ Sbjct: 424 VYSEKGIAARLYDDVNNGITLISEKAGSDSSYTSVDNSAIGRRIKQIDEEIDRMEDRLAE 483 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 RY QFT L+ ++ +N+ S++L QQF + Sbjct: 484 MEDRYWRQFTALEQAVSRMNAQSAWLFQQFGGGNR 518 >UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K917_AZOSB Length = 473 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 170/477 (35%), Positives = 263/477 (55%), Gaps = 25/477 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S G S LD+ S++ L + + L+ ++ +++S+ AKLSA+G +KSALT+ QTA Sbjct: 1 MAAITSSG--SILDIDSLVKGLMSVESRPLSLLATKEASYQAKLSAFGQIKSALTSLQTA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL+ D F+AT T + F+AT+ A AG Y+I VT +A+ Q ++T T+ A Sbjct: 59 TTALNSTDKFAATKATVAGDGFTATSDAKAAAGSYSIDVTQMAKIQRVSTATSSTFVPAA 118 Query: 121 I-------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-GVSASIINVG 172 + T D P T + +L +RDAIN G+ ASI+N G Sbjct: 119 GKMTIEYGTVKTTDGTKSFASDSPPRTATLDFEGGTLEQLRDAINKDTTLGLKASIVNNG 178 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +L ++ TG + A L+ A SF +A+ + M AAQ+A L V+ + Sbjct: 179 T-TSQLVLSGTKTGANMAFKLTGESGLADLSFDPSATAAAGDKMYSVQAAQDALLKVDGI 237 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQT-----LTITQDTSKAQTAIKDWVNAYNSLID 287 ++ SSNTISD ++ +TL LN +G T +T+ D S A+TA+ +V AYN + Sbjct: 238 SVTRSSNTISDVIDGVTLTLNKEPSGTATSLSGTVTVAADQSAAKTAVDAFVKAYNEVQS 297 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGI 346 T SLT Y ++++ + L GD+T R+IQ QL+S L+ + S + +L+QIGI Sbjct: 298 TLKSLTAY-------NTETDTAATLTGDATARSIQGQLRSALAQSFSGLGNASSLSQIGI 350 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 T DG L +D+ K A+ A VGAL G K G L+S + + G+I + Sbjct: 351 TF-AKDGTLSVDSTKFNKAMSDPAMNVGALFAGTDKIDGFADVFSKKLSSMIDSGGVIAS 409 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 TDG++ T+ +TK Y+A R++A ARY+ QF+ LD L++ ++ TS+YL+QQ N Sbjct: 410 RTDGINSTIKSITKQYDAMETRLEAMEARYRSQFSSLDTLLSGMSQTSTYLSQQLAN 466 >UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXS2_VARPS Length = 482 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 198/494 (40%), Positives = 288/494 (58%), Gaps = 41/494 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS LDLS++L L A+ L + +Q S+T+KLSAYGTL+S+L T Q A Sbjct: 1 MASISSLGVGSNLDLSTLLSQLQTAESQPLVALQQRQVSYTSKLSAYGTLQSSLGTLQAA 60 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS LF + +S+T +A AG A AG Y I VT LAQ Q+L T Sbjct: 61 AKKLSDPALFQGVKAVSSATDVLTAAAAGTAAAGTYAIDVTQLAQPQSLVAAGQAS---T 117 Query: 120 AIATSDSKLTIQQG----------------------GDKDPITIDISAANSSLSGIRDAI 157 A +TI G + + I I ++N++L+GIRDAI Sbjct: 118 TAAIGSGTITIDFGAITGGTLDAATGTYSGSGFTKDATRTAVPISIDSSNNTLAGIRDAI 177 Query: 158 NNAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM 216 N AKAGVSASI+N G+G RL +TS+ TG ++M +SV+GD ALQ+ + D + + N + Sbjct: 178 NAAKAGVSASIVNDGSGTPNRLVLTSSQTGEASSMRVSVAGDAALQNLLNNDPAGTQN-L 236 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 +VA QNA+L+VN +A+ ++SNT+ +A++ TL L TG+ +L+ DT+ +TAI Sbjct: 237 RQTVAGQNAKLSVNGIAVTSASNTVKEAIQGTTLTLLK--TGSSSLSTQADTAAVETAIN 294 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 D+V AYNSL T ++LT Y + S + AL+GDSTLR +QT+++ L+ + Sbjct: 295 DFVKAYNSLQATANTLTAY-------NQDSKTGAALVGDSTLRNLQTRIRQALTTPQAGG 347 Query: 337 --SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV-GDGKKTGITTTIGSN 393 K L++IG+ DG + +D+ KL +AL + +GV L G G + + Sbjct: 348 PDDMKVLSEIGVAFQ-KDGTMAVDSTKLKSALASNLAGVSGLFASATGSTAGYGKQLSAL 406 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + ST G +K A+DG++ +L +L + Y R+DA+V RY+ QFTQLD+LM+ +N T Sbjct: 407 VDDLTSTGGALKVASDGMAASLKQLDEQYADMKTRVDAKVERYRTQFTQLDLLMSQMNRT 466 Query: 454 SSYLTQQFENNSNS 467 SSYLTQQF + +S Sbjct: 467 SSYLTQQFASMQSS 480 >UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID=C4SBN1_YERMO Length = 490 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 155/491 (31%), Positives = 257/491 (52%), Gaps = 32/491 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS+SSLG+GSG+D +++L+ + A ++ L P + Q+S+ K+SA+G + S+L+ Q + Sbjct: 1 MASLSSLGIGSGIDTATMLEQIKAGEQTRLKPYTIMQNSYKLKVSAWGGISSSLSALQGS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD-DTKT 119 L+ T T SS AF+AT A A ++++++ LA A + T D Sbjct: 61 VKKLTSDAF--NTLTVSSNKAFTATATSEANADTHSVTISQLATAHKIKTDGVDSADEML 118 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + ++ GD +++ +SL+ I A+N + VSAS+ +G Y+L Sbjct: 119 GESNGGTRTITITTGDGKTTEVELKDDETSLNQIAKAVNKQDSNVSASVQRTDDG-YQLV 177 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN-------GMEVSVAAQNAQLTVNNV 232 TS +TG D M++SV GDD L + Y + N GM+ A +A L V+ Sbjct: 178 FTSKNTGSDGEMSVSVEGDDTLGGKLNYKEDDAGNKEGDPDKGMQQVTKALDATLIVDGS 237 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQT--------LTITQDTSKAQTAIKDWVNAYNS 284 SSN ISD + +TL L V+ + T +T+T+DTS ++++KD+V+ YN+ Sbjct: 238 KYTRSSNNISDIIPGVTLVLKQVSESDTTTGEKIPEQMTLTRDTSAIKSSVKDFVDKYNA 297 Query: 285 LIDTFSSLTKYTA------VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS--SS 336 L+ S +KY D+ +Q++ NGAL+GDSTLR + +S ++ S+ Sbjct: 298 LLKLTSEASKYVPNKTAGLSDSDVATQNAQNGALMGDSTLRGMVGDFRSAVNGVYGDPSA 357 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 Y +LA IG+ DP+ G++ L+ KL A+ + G+ + +G G+K G+ T++ + +T Sbjct: 358 DYGSLADIGVKIDPATGQMTLNESKLDEAIADNPDGIADMFIGRGEKEGLATSLSATITE 417 Query: 397 WLST-----TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 +L GIIK +T+G+ + + ID QV RY+ QF LD M+ LN Sbjct: 418 YLGDPDTKMNGIIKDSTEGLDAQIKLMDTQIEKTQKLIDNQVERYRVQFQNLDTTMSKLN 477 Query: 452 STSSYLTQQFE 462 S S+ L+ Sbjct: 478 SMSNQLSSILA 488 >UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID1_PSEAE Length = 478 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 151/479 (31%), Positives = 246/479 (51%), Gaps = 30/479 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S + G SGLD+ +I+ +L AA+KA + +S TAK + G LKSA++ QT Sbjct: 4 STTINGYNSGLDIKNIVSTLVAAEKAPKEAQLKRLESDTTAKFTGIGQLKSAISDLQTIL 63 Query: 62 TALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+K +LF S ++S F +AT +A+ G Y + VT LA + T + D KT Sbjct: 64 KELNKPELFQKRSASTSDEKFATATATKDALPGIYKLEVTQLASVSKVATASFADGYKT- 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINV-GNGEYR 177 TS LTI+QG D +T+++ AA ++L+ +RD++N G++A+I+N G+G R Sbjct: 123 --TSGGTLTIKQGADDAGVTVNV-AAGATLAEVRDSLNAQLKDKGITANIVNNPGDGTSR 179 Query: 178 LSVTSNDTGLDNA-----------MTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 L T D+G + G D + D ++SS+ ++ A+NA+ Sbjct: 180 LVFTGKDSGAGKDVFVQGSSGLENFNIGSVGADGKLTLSQLDGTSSSSSGYITQ-AKNAK 238 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNS 284 +++ + +E+ +NT+ + +T L VT N+ T+++ QD + IK +V AYN Sbjct: 239 FSIDGLTLESPTNTVDKVINGVTFELKTVTDTNKPITISVEQDRGGVKDNIKKFVEAYNK 298 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI 344 L+ S LT T V D ++ GAL+GDS++R + T +++ + + + LA + Sbjct: 299 LVGVTSELTGVTKV---GDDKAPVVGALVGDSSVRNLLTTMRNEMVQPGQGTDVRMLADM 355 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 GITT DG LE+D KL LK V AL GD TG+ + LT + T G++ Sbjct: 356 GITT-KKDGTLEIDDKKLDKVLKDKFESVSALFTGD---TGLMKRLDDKLTPYTQTGGVL 411 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + DG+ T+ + A + R++ R +QFT +D L+ LN TS + Q + Sbjct: 412 QQRLDGLQDTIKSVDTQREALNRRVEQLQDRLLKQFTAMDQLIGQLNQTSGRMAQALSS 470 >UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A819_NATTJ Length = 487 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 97/501 (19%), Positives = 205/501 (40%), Gaps = 53/501 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG D +++ L ++ + + + + + L L +F ++ Sbjct: 1 MRLGGISSGFDTHGLVERLMEIERQPIQRMEKEIEQLESTKEEWRELNKTLQSFMDELSS 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD----DTKT 119 L DL+ + SS S T + +A Y + V+ +A+A +++ D Sbjct: 61 LQDKDLYFSMEAESSHEDISVTAERDVMARTYDLEVSQIARAHRISSGPIESIQDLDDVD 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-------------VSA 166 + L + G +++P TI+I + + SL+ IRD IN+ + A Sbjct: 121 EPLELEGDLELYLGDEEEPYTIEIESED-SLADIRDKINDGDLKETGDEELDNRELPLEA 179 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMT-LSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 II RL + + TG +++T + S + Q + + AQ+A Sbjct: 180 QIIGD-----RLVIEAEQTGESHSITKIGGSENVWGQDGLNLWNAEEDYFSNEIDKAQDA 234 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTG-----NQTLTITQDTSKAQTAIKDWVN 280 + +N + EN SNTI ++ +T+++ ++ + ++I D +KA+ I ++V Sbjct: 235 KFQINGLDFENESNTIDHIIDGVTIDIGAISADQELPVSSLISIELDDNKAEEEISEFVE 294 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK- 339 +YN + + T D D G L GDS LR + ++ +++ +++ Sbjct: 295 SYNEIFSKLQDKGRITLADDEID-----RGPLQGDSLLRNLTRNFRTRVTDPINAEGLGL 349 Query: 340 -----TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 L+Q GI D G++ D D+ A + S V G + GI + + L Sbjct: 350 KNDRLVLSQFGIEID-RYGEMTFDKDRFKEAQDESVSQVYEAFGG---EHGIGARLQNYL 405 Query: 395 TSWLSTTG---------IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + G I + + +++ + R++++ QF++++ Sbjct: 406 EGLSFSEGAREADMRETAIGNRKLTLDRQIDRNEDRMDQMERRLESREDHLWSQFSRMEQ 465 Query: 446 LMTSLNSTSSYLTQQFENNSN 466 + ++ S ++L Q+ + S+ Sbjct: 466 ALNNVYSEGNWLQHQYMHMSS 486 >UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XW72_PSEMY Length = 487 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 143/489 (29%), Positives = 239/489 (48%), Gaps = 42/489 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G+GSG+D+ SI+ L +++A T + + + A++SA GTL AL TF+TA Sbjct: 2 VGITGIGSGVDIDSIVKVLVDSERAPKTAQLDRLEKTTVARISALGTLTGALNTFKTAID 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 +L+KA LF A + +SS T T A A AG Y++ V LA + + ++ Sbjct: 62 SLNKASLFEARTASSSNTNVLKVTAATTAPAGNYSVQVQQLASSSKVGLQSVSGGGAATF 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLS 179 + ++ ++I+ N++L+G+RDAIN A +GVSASII +G RL Sbjct: 122 NSGVMSIS----AGSTSFDVEITEGNNTLAGMRDAINEAGRSSGVSASIITDDSGS-RLV 176 Query: 180 VTSNDTGLDNAMTLSVSGD------------------DALQSFMGYDASASSNGMEVSVA 221 +TS TG N + +SV+ D D + S+++ V Sbjct: 177 LTSTKTGAGNDIQVSVTEDGVTSGSNALTSQAFTPAVDPDNANAFLPPSSTTGAAGVISK 236 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-------NQTLTITQDTSKAQTA 274 AQ+A+LT++ + + +N I DALE +TL+L + LT+ D + ++ Sbjct: 237 AQSAKLTIDGLQLVRDTNKIDDALEGVTLDLVAAQSSADRLEGKTINLTVGVDKAGVKSN 296 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 ++ +V+AYN+LI + S LT V D + G LLGDS++R + + L++ + Sbjct: 297 LQKFVSAYNALITSTSQLTAVVPV----DGSNPVTGPLLGDSSVRNVLSALRNEMVKMTG 352 Query: 335 SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 + LA +GITT+ DGKL L+ LTA L + V + G G+ + + Sbjct: 353 EGGVRALADLGITTE-KDGKLTLNDSALTATLDNNFDQVAGYLTGG---DGLMERLAKAV 408 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 + ++ST G++K TD ++ T + + A R++ R Q+ +D L+ L TS Sbjct: 409 SGYVSTDGVLKQRTDALNGTKKNIDEQRKALDLRVEKIQTRLYAQYNAMDSLVGQLKRTS 468 Query: 455 SYLTQQFEN 463 L+ N Sbjct: 469 ESLSGMLAN 477 >UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KAZ0_PECWW Length = 479 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 187/481 (38%), Positives = 279/481 (58%), Gaps = 15/481 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G SG +++LD LT +++ +TP++NQ+ + ++ +A+ TLK+ALT ++A Sbjct: 1 MANISFTGSTSGF--TAVLDQLTTFEQSRITPVNNQKKIYQSRDTAFDTLKTALTKLESA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYT-ISVTHLAQAQTLTTRTT---RDD 116 N AL+KA+ + TS TS + T ++ + + V +LA A +L + +D Sbjct: 59 NEALAKANSINKTSITSGESKAFTATTSSSASSGSYSVEVENLATAHSLLSSEFSSSKDP 118 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T LTI Q G + P+ I ++ +SL GIRDAIN VSASII + Y Sbjct: 119 LGTTTDGGTRTLTISQPGQEKPLEIQLTDKQTSLEGIRDAINKTNGSVSASIIKADDNTY 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGY--DASASSNGMEVSVAAQNAQLTVNNVAI 234 L++T+ DTG MT+SV+GD L S + Y D A S M+ AA+NA + +N + I Sbjct: 179 YLALTAKDTGTQAKMTVSVTGDTLLNSKLNYTPDDGAGSGAMKQQAAAENAVVKLNGITI 238 Query: 235 ENSSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 SNT++DA++ ++LNL + + LTI DT+ AI++WV+AYNSL T ++ Sbjct: 239 TRQSNTVTDAVDGVSLNLKAESAPGTAEKLTIATDTAPMNKAIQEWVDAYNSLQTTIGNV 298 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 T +TA D + SSNG LLG+ST+R IQ LK+ +S+ S S TL ++GI +P D Sbjct: 299 THFTAADHNTATPDSSNGVLLGNSTVRGIQATLKTQISSAQSGMSISTLNEMGIKQNPKD 358 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-----GIIKAA 407 GKLE+DA KL +L + +S V VGDGKKTG T + + L L T+ G I+ A Sbjct: 359 GKLEIDATKLQTSLAEKSSSVTEFFVGDGKKTGFATQVNTYLDGVLDTSTGNKKGAIQIA 418 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 D ++ TL + K ID +ARYK QF++LD L++ LNST +LT+QF + S Sbjct: 419 KDSIADTLKTIEKTRVRTQLSIDDTIARYKSQFSKLDKLVSDLNSTGDFLTKQFAALTKS 478 Query: 468 K 468 + Sbjct: 479 Q 479 >UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bordetella RepID=Q2L175_BORA1 Length = 459 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 168/472 (35%), Positives = 261/472 (55%), Gaps = 22/472 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG SGL L LD L A++ L I+NQQSS+ ++SA+G ++SA+ Q A Sbjct: 1 MATISSLG-SSGLPLQETLDKLQEAEERRLKLITNQQSSYQTRVSAFGKIQSAVEALQKA 59 Query: 61 NTALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + T+ + + TA A+AG Y I V+ LA AQ+L ++ Sbjct: 60 AANLGDMGSTSTLTTKVTGNDGVAVATANGAMAGTYNIKVSKLATAQSLQSQAFNSRIDN 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-GVSASIINVGNGEYRL 178 + +T G + +T+ +++SL GI +IN A G+SA+I+N G G+Y L Sbjct: 120 M--GTGGVITFTVDGKEKNLTL---GSDTSLGGITKSINGDDALGLSATIVNDGQGKYYL 174 Query: 179 SVTSNDTGLDNAMT-LSVSGDDALQSFMGYDASA-SSNGMEVSVAAQNAQLTVNNVAIEN 236 VTS G A+T ++V+G++ L S + YDASA ++ M+ VA +NA+L++N + + + Sbjct: 175 MVTSKSEGEKAAVTKIAVTGNNELASALNYDASAPDTSSMKQMVAGKNAELSINGIPVVS 234 Query: 237 SSNTISDALENITLNLNDVTTGN---QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +N ++ A++ +TL L VT N T+TI QD SK ++ +V AYNSL T + LT Sbjct: 235 QTNAVTTAIDGVTLTLTAVTPENGAGSTVTIAQDNSKITPLVQAFVTAYNSLQTTIADLT 294 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 + + AL GD R+IQ+ + + L S +TL Q+GIT+DP G Sbjct: 295 AFNV-------DKQTQSALTGDGATRSIQSSIAAALRVVTGEGSVQTLGQLGITSDPKTG 347 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 L+LD DKL AL ++ + + K G+ + + L +G IK+ TDG+ K Sbjct: 348 ALKLDNDKLIKALNENPADAMRVFT--SKDNGLAARVSAATDKILGDSGTIKSQTDGLEK 405 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 T+ L K Y + S +I+A +A Y+ QF +LD L++ L TS+YL+QQF + S Sbjct: 406 TIASLKKQYESTSTQIEATMANYRNQFVKLDALVSQLKVTSNYLSQQFASLS 457 >UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=Photobacterium RepID=D0YZ92_LISDA Length = 462 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 27/472 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SGLD++ + L AA++A I QQ +LS YG +KSA++ + Sbjct: 2 GLSAGGLASGLDITGMTQQLVAAERAPKEQRIKEQQQKVGVQLSGYGQIKSAVSGLEDMV 61 Query: 62 TALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ +F+ S SS ++F + A G Y I V LA++ + + D A Sbjct: 62 KKFTEDKVFAGQSAESSESSFVDVKASAEAKNGTYNIEVLALAKSHKIVSNNAFDSDPKA 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 L I G +TID + SSL + AINNA GV+A++IN G ++ Sbjct: 122 -ELGSGTLDITVDGKTMSLTIDKN--KSSLKEVVSAINNASDNPGVTATVINDEKGA-KI 177 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS--ASSNGMEVSVAAQNAQLTVNNVAIEN 236 +S+ TG+ N +++ S D + +D S ++ M A +AQ+ ++N + + Sbjct: 178 VFSSSQTGVKNQISIDASKMDGELKKLSFDPSNITANPEMIQMQAGVDAQIRIDNHTVVS 237 Query: 237 -SSNTISDALENITLNLNDVTTG----NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 SN D +E +TL++ +T + + IT +TS A+ AIK++++AYN IDT S Sbjct: 238 NDSNKFEDVIEGLTLDIKKLTNTEDVKSAKIDITNNTSGAKKAIKEFIDAYNGFIDTSES 297 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTDP 350 L+KY ++++ S+G L GDS R+I +Q+++++++ V ++ L+ G+TTD Sbjct: 298 LSKY-------NTETKSSGPLNGDSLTRSIISQMRNLMNSGVEVNNQSYYLSDFGVTTD- 349 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATD 409 GK+E+D +KL ALK + A K G + S+ S T G I Sbjct: 350 RYGKIEIDDEKLDDALKDNFKAFNAFFHT--KDDGFLDKSEAIFKSFTSSTDGSITQKEK 407 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + + +L D + ++R+ A R +QF+ +D + +N+ + + Sbjct: 408 SLKEQQQRLNDDMSDLNERMKAYEERTYKQFSAMDAAIGKMNNELNTMMSLM 459 >UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y379_LEPCP Length = 479 Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats. Identities = 153/490 (31%), Positives = 264/490 (53%), Gaps = 36/490 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISS G+GSGLD+SSI+ L A +K+ L + + S +KLSAYG ++S ++ + A Sbjct: 1 MASISSAGIGSGLDVSSIVTQLMAVEKSPLQQMQTEASKIQSKLSAYGKVQSYVSALRDA 60 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+K+D + +T+ +S + F+ATTA A AG Y+++V +A AQT+ + T Sbjct: 61 ALNLTKSDTWGSTTASSGDASVFTATTASGATAGNYSLTVQQMASAQTVASAAWPASVST 120 Query: 120 AI-----------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 A + T + G +T+ AA+ +L+ +RD IN AK+GV ASI Sbjct: 121 VGSGVLRLELGTWAAGQTGFTPKSGTSSVDVTV---AASDTLADVRDKINAAKSGVMASI 177 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNGMEVSVAA 222 +N +G RL + S++TG +NA ++ + DD S + +D SA +N M S AA Sbjct: 178 VNDTSGS-RLVLRSSETGAENAFRVTATDDDGNNTDASGLSALAFDPSAGANAMVQSQAA 236 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 NA+ T+N +++ ++SN ++D ++ +T+ L V++ L+++ +T +TA+ + +AY Sbjct: 237 VNARATINGLSVSSASNLLTDVVDGVTIKLGKVSSTPVDLSVSSNTESVKTAVTAFADAY 296 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTL 341 N+L + TKY A + S L GDS +++ +++++ T + ++ L Sbjct: 297 NNLSKYLAEQTKYNAA-------AKSGATLQGDSGTNALRSAMRNIIGGTSGVTGAFNRL 349 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALI----VGDGKKTGITTTIGSNLTSW 397 AQ+G+ DG L++D+ KLT++L K + + AL G+ G ++ S Sbjct: 350 AQVGLDPQS-DGTLKVDSTKLTSSLGK-LADLKALFANKDAGNEANNGFAVSLQKWGDSL 407 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 LS G + + + + ++ K ++R+ AR + Q+T LD M LN S+Y+ Sbjct: 408 LSFDGSLSTRSSSLQRQIDANAKKQEDFNERMTGVEARIRAQYTALDTQMAKLNGLSTYM 467 Query: 458 TQQFENNSNS 467 TQQ N + S Sbjct: 468 TQQITNMNKS 477 >UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJT0_METPP Length = 477 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 154/482 (31%), Positives = 248/482 (51%), Gaps = 31/482 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD+SSI+ L A ++ L + + ++SAYG L+S ++ A Sbjct: 2 AISSPGLGSGLDVSSIVSQLVALERKPLEKMQTAATFMQTQVSAYGQLQSLVSAVGDAAK 61 Query: 63 ALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K L+ A S TS T+ +AT + A G Y++SV+ +A+AQ+L + T Sbjct: 62 ALAKPTLWQAASAGTSDATSVAATASAGAAIGSYSVSVSQIARAQSLASAVFTAPTDV-- 119 Query: 122 ATSDSKLTIQQGG-----------DKDPITIDIS-AANSSLSGIRDAINNAKAGVSASII 169 K+TI+ GG T+++ A ++L ++ IN A AGVSA+I+ Sbjct: 120 -VGAGKMTIELGGYNVANDPAFTPKTGSTTLELEFAEGTTLEQVKTQINAANAGVSAAIV 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 NG RL++TS TGLD+ + ++VS + + YD ++ +N M + AA NA ++ Sbjct: 179 RDANGA-RLTLTSTTTGLDSTLRVAVSDATGALTGLAYDPASGANPMTQTQAAVNALASI 237 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N +AIE+ +N ++ L+ +TL+L VTT T+ +T +T + AIK + +AYN+L Sbjct: 238 NGLAIESPTNRLTGTLDGVTLDLVKVTTAPVTVNVTTNTGTMRDAIKKFSDAYNALNTYL 297 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN-TVSSSSYKTLAQIGITT 348 + TKY D ++ G L GDS ++ Q ++ML + +S+ L+ IG Sbjct: 298 VTQTKY-------DEENKIGGTLQGDSAAVGLRNQFRAMLRQDSAASAELTRLSDIGFNV 350 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGK----KTGITTTIGSNLTSWLSTTGII 404 DG + LD KL AAL K + + L + TG+ T G+I Sbjct: 351 Q-RDGSIVLDNAKLDAALAK-PAELSKLFTTNDTANPASTGLGVRFQKLADMSTGTEGVI 408 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + G+ L + D + +DR D R +Q+T LD M L++ S+Y+TQQ + Sbjct: 409 ASRNAGLKARLERNQDDQDKVNDRADRMQVRLTQQYTALDTQMAKLSALSTYMTQQLDGL 468 Query: 465 SN 466 SN Sbjct: 469 SN 470 >UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKN6_PSEU5 Length = 451 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 135/450 (30%), Positives = 230/450 (51%), Gaps = 40/450 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G+GSG+D+ SI+ S+ AA++A ++N + T +++A G LKSA++ FQTA Sbjct: 2 VGVTGIGSGIDIDSIVKSMVAAERAPKEAQLANLEKKTTTQITAIGALKSAISEFQTALR 61 Query: 63 ALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K +LF A S TSS T + + A AG Y + V LA + + + D+ Sbjct: 62 ALNKPELFQARSATSSKTDLVGVSASPKAGAGSYQVEVRSLATSSKVALKAFPDNAGAPA 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLS 179 + +T++ G PITID S+ ++L+GIRDAIN + G++A+I+ G RL Sbjct: 122 TFAGGTMTVKVGEKSLPITIDQSS--NTLAGIRDAINAGGKEMGLTATIVTDDAGA-RLV 178 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSF-----MGYDASASS-------------------NG 215 ++S TG +T+ DA +G+D S +G Sbjct: 179 LSSATTGAGEDITVEAKSTDAALGAYSLEDLGFDGSTVEPKPNEDDPEAYAAAMTAYRSG 238 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQT 273 AQ+AQ++V+ + I + SN I A+E +TL+L T N+ T+++ +D + + Sbjct: 239 PMTLTQAQSAQVSVDGLLITSKSNKIEGAIEGVTLDLKGKTAANEPLTISVAEDKAGVKK 298 Query: 274 AIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV 333 I+ +V++YN LI ++ TK T V +G + GAL+GD++ R + ++S L N Sbjct: 299 QIQSFVDSYNKLIGVINAQTKVTPVGSGG---APLAGALVGDASARLVLGTIRSELVNVQ 355 Query: 334 SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 + + L +GITT DG L+ D KL AL + + + L G+ G+ + S Sbjct: 356 GEGAIRALFDLGITTQ-KDGTLKTDDTKLDDALSNNFADLPGLFTGN---NGLAARLDSK 411 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 L + T GI++ +++T++ + K + Sbjct: 412 LKPYTETGGILEQRNKVMTETISGIGKQRD 441 >UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alteromonadales RepID=Q485N1_COLP3 Length = 478 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 121/488 (24%), Positives = 235/488 (48%), Gaps = 42/488 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M ++ G+GSGL +S I++++ A+KA ++ + QQ+ T +SA G LKSAL + ++ Sbjct: 1 MPDLTFTGIGSGLKVSEIVNAIVGAEKAPFISRANKQQAEMTTDISAIGALKSALESVES 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + ++L+ AD + + + + + + + +A G Y++ V L+Q+ L + +D + Sbjct: 61 SISSLADADNYQLRTASGADSFVGLSASKDAQIGNYSVKVDVLSQSHKLMSGAMAEDEQ- 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG--VSASIINVGNGEYR 177 + L I I + +A+ +LS IRDAIN++ V A+I+ G++ Sbjct: 120 ---VGEGTLNIAVAETNFNIAV---SASDTLSDIRDAINDSDDNESVIATIVTDDAGQH- 172 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGY-------------DASASSNGMEVSVAAQN 224 L +TS +TG+ NA+T +V+ D + G D S + A + Sbjct: 173 LIMTSKETGVANAITTTVTDLDDNNNVDGLVGLSRLAYDVSDPDDSLHIKNLTQIDEAVD 232 Query: 225 AQLTVNN-VAIENSSNTISDALENITLNLNDVTTGNQT-----LTITQDTSKAQTAIKDW 278 AQ+T++ + + +S+N + ++ + + + + ++ ++ ++ ++ + Sbjct: 233 AQITIDGTLVVTSSTNEFKNVIDGVDITAKKMHDVDDNDDVSRISFKENNGNIKSGLEGF 292 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 V +YN L L +G L GDS LR + +L+ S + Sbjct: 293 VKSYNELQVLSKQLGAAGESG---------SGPLAGDSLLRGVMGKLRQQFSQAFDMGNG 343 Query: 339 KT--LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 + L+Q+G+ +D G L LD + L + D +GV VG + G +++ Sbjct: 344 NSMSLSQLGVESDQY-GVLSLDTETLNEYIDSDVAGVQQFFVGTDSENGFASSLEELTGF 402 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + T G+I+ D + L++L DY A R+D+ AR +Q+ +D+++ +LNSTSS+ Sbjct: 403 YTDTDGVIQNRIDSGTSQLDRLDDDYLAFERRMDSLEARLFKQYNAMDLIVANLNSTSSF 462 Query: 457 LTQQFENN 464 L Q +N Sbjct: 463 LLAQLDNM 470 >UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQ71_BDEBA Length = 455 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 102/469 (21%), Positives = 190/469 (40%), Gaps = 28/469 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA G+ SGL + I++ L A++ + + ++ KL L++ + Sbjct: 1 MAGFRITGMASGLPPN-IVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKN 59 Query: 61 NTALSKADLFSATSTTSSTTAFSA--TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L+ F S G+AI G Y I V LAQ + D + Sbjct: 60 LGELTSTSGFVDKKFLSGDPNIVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQ 119 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII---NVGNGE 175 T I K +G + I+ +NS+L G+ IN A G+ A ++ Sbjct: 120 TQIGVGYIKFETPEGTK----EVYINGSNSTLDGVMKQINAANVGLKAQVVEDRKDQENP 175 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++L V+ TG D+ +T M + E S AQNA++ V+ IE Sbjct: 176 FKLLVSGLSTGNDSQVTFPKIYLLDGDQDMYF---------EESRKAQNAKVKVDGFEIE 226 Query: 236 NSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 N +D + +TL+ G L++ ++ IK +V++YN+ ++ K Sbjct: 227 LPDNKSTDLVPGVTLDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNK 286 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSD 352 A + ++ + G L GD LR+I+ L+ ++ N S + + ++GI + + Sbjct: 287 LQA----GNGKNPALGPLGGDGMLRSIENSLRRVILNPQMGVESPIRRVGELGIEFN-RN 341 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGV 411 G L DK L+ + V A + GDG TG +T+ + + ++ G I G+ Sbjct: 342 GTLNFSQDKFNKVLQANPKAVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGL 401 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + ++ +++ + + +F L+ M++LN+ + Sbjct: 402 EDRIKQVNNRIETKERQLERKEDSLRRKFADLEQKMSALNAQQAKFAAM 450 >UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVP3_9DELT Length = 465 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 121/477 (25%), Positives = 226/477 (47%), Gaps = 33/477 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + SIS+LGVGSGL+L SIL+ L +K L P+ + A+L A+ +++ L ++ Sbjct: 3 VGSISTLGVGSGLELQSILEDLRGIDEKQRLDPLKKNIDRYEAQLEAFTVVQNKLLDMRS 62 Query: 60 ANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L + ++ +++S+ + +AT A ++ V LA TL + D Sbjct: 63 HVRDLGLETTYLTSAASSSNESVATATAAAGVAEQSLSMEVERLASRSTLLSEGVADR-G 121 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGN--G 174 T I+ S + + G D D +T+++ ++L G+ INN A AGVSA II+ G+ Sbjct: 122 TVISDDASVFSYRVG-DGDLVTVEVPEG-TTLEGLVQLINNDPANAGVSARIIDNGDMDN 179 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 ++L + +N+TG +N + + D + + + AA NA ++ ++ Sbjct: 180 PFQLILRANETGSNNFIQIEELPDAS--------PAMDTRLEGEEPAALNASFILDGISY 231 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 NT+++ ++ +T L TG TL+++QDTS + + D V AYN ++ + ++ Sbjct: 232 RRQGNTVANVIDGLTFELQQ--TGLTTLSVSQDTSNVRELVVDLVAAYNEVVQEIAGKSR 289 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIGITTDPS 351 + D ++ G L +T+ ++ +L+++++ T S + + + +G+ Sbjct: 290 F-------DEETGKPGVLAR-TTVSGLRHELQNLMTATYQGDESGAIRNMFDLGLEFQ-R 340 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGK--KTGITTTIGSNLTSWLSTTGIIKAATD 409 DG + L+ + L AL + V ++GD K G + L S S G I + Sbjct: 341 DGSIVLNEEMLDEALAANPQAVRDFMLGDFKREAPGFADRLQDRLGSIASYGGQISTERN 400 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L + +R+D + A QF +LD M+ + S YLT QF++ S Sbjct: 401 SAEDRIRDLETRIESERERLDRRYAVLTRQFIELDSYMSRMTQMSDYLTSQFDSLSQ 457 >UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 Tax=Shewanella RepID=Q0HKR3_SHESM Length = 455 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 144/467 (30%), Positives = 245/467 (52%), Gaps = 28/467 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++S+G+GSG+D+ I+ +L A+ A + + A++S G LKSA++ F Sbjct: 2 GLTSVGIGSGMDIGGIVTALVNAESAGKIAKFDVNEGKLNAQISGIGALKSAMSEFNDKL 61 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+KA+ F S TSS SAT A++G Y I V LAQ+Q + T D T Sbjct: 62 KTLAKAETFGSQKVVTSSKDYLSATVDKTAVSGTYQIKVEQLAQSQKVGTAVATDTTS-- 119 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + L+I+ G ID+SA + SL+ I + IN + V+A+I+N G +L Sbjct: 120 -PIGEGALSIKVG-SGTAFNIDVSATD-SLTDIMNKINKSDDNTDVTATIVNGELGP-QL 175 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + S TG DN ++++ + A + + M A+NA + V+ V + + S Sbjct: 176 VLGSKKTGEDNQISVTATDSGAGTGL------SDTFTMSEVTPAKNAIVYVDGVKVVSDS 229 Query: 239 NTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 NT+ A+ ++L L T+T+++DT+K +TAI+ +V +YNSL+ T +LTKY Sbjct: 230 NTLDKAITGVSLTLTAADVDKTTTMTVSKDTAKTKTAIEGFVESYNSLMTTIQNLTKY-- 287 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT-LAQIGITTDPSDGKLE 356 D+ + G L GD+ R+IQ+QL++M+S+ +S K LA +GI T +G LE Sbjct: 288 -----DADTKQAGILQGDALPRSIQSQLRTMVSSEFDTSDGKQVLANLGIKT-TREGLLE 341 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 +D+ KLT +LK D + L + TG++ + + +++ + GII + + + L Sbjct: 342 IDSTKLTESLKNDKGTISELFT--SENTGLSAKMSGLVDTYIKSGGIIDGRDNSLDEQLA 399 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++ S R+ A R +QF +D+++ +LNS SS L + ++ Sbjct: 400 RIADSREQLSTRMAAYSDRLYKQFNAMDLVVANLNSQSSMLLSRLDS 446 >UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 Tax=Shewanella RepID=A8FXV4_SHESH Length = 457 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 126/460 (27%), Positives = 229/460 (49%), Gaps = 28/460 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++++ G+GSGLD+++I+ L A+K + + + AK+SA GTLKSAL+TFQ A Sbjct: 2 ALTATGIGSGLDINTIVGVLVDAEKIPKEAMFDKTEKTIDAKVSAIGTLKSALSTFQDAL 61 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + + ++ ++ +AT + +G Y + V LAQ + D + Sbjct: 62 EKLQDGGSLNQRTVSTGESSYLTATADKTSQSGSYNVKVEQLAQQHKVAGINVADPS--- 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + + L + G+ +T+ A SL I IN+A GV+A+II G RL Sbjct: 119 LPVGEGSLDLTVNGENFSVTV---GATDSLEDIAKNINSATDNVGVTATIITSDAGS-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 ++S+ G D+ +++ + G + + A+N+ + V+ + + + Sbjct: 175 VLSSDTEGTDSQISVVANDTVG----TGLNDMFGGANLTELQVAKNSIVHVDGQQLTSQT 230 Query: 239 NTISDALENITLNLNDVTTGNQTLT-ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 N + A+ +TL+L D T+ + D + ++ +V+AYNSLIDT L+ Y Sbjct: 231 NEVKGAITGVTLSLTDADLNETTVVKVELDKDAVKDNVQGFVDAYNSLIDTVDKLSSY-- 288 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTDPSDGKLE 356 D+ AL GDS +R+I++QL+SM+S+ V L IGI D GKL Sbjct: 289 -----DADKKEAAALQGDSMIRSIESQLRSMISSRVDVGGETVALYDIGIEAD-RYGKLS 342 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTL 415 +D+DKL A++++ +G+ L K TG+ + + + S++ TTG+I + + + Sbjct: 343 VDSDKLDTAIEENMTGIEGLFST--KDTGLANRLDTLVESYVKPTTGLIDSRNNAYTSDK 400 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 +L A + +++ AR +QF +D+++ +LN S+ Sbjct: 401 QRLDDQREAFTLKMEQLEARLMKQFNAMDLIVGNLNQQSA 440 >UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADF2_CARHZ Length = 476 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 139/488 (28%), Positives = 243/488 (49%), Gaps = 45/488 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 I G+ SGLD + I++ L ++ L + ++++ A A+ +K+ L+T + + Sbjct: 3 IQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQS 62 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L A L+++ T+T+S TT +A+ A+ G YTI V +A + + + T T + Sbjct: 63 LQSASLYTSLTATSSDTTILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITAT-LN 121 Query: 123 TSDSKLTIQQGG------DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 + + I GG + I I I + + SL IRD INNAKAGV+ASI++ Sbjct: 122 LNPTSFKIAIGGVVQKDSQGNDIVISIDSTD-SLVSIRDKINNAKAGVTASIVDN----- 175 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL +T+N TG N+++ + DALQ+ D A+ N + V + +A+L +N + + Sbjct: 176 RLLLTANVTGSANSISFTAVSGDALQALGIAD--ANGNAVNVVQSGVDAKLIINGLTVIR 233 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SSNTISDA+ +TLN+ + G ++T+ DT+ IK +VN YN L++ ++ T Y Sbjct: 234 SSNTISDAIYGVTLNVKKI--GTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAY- 290 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-----------SSYKTLAQIG 345 D + + G L GD+T + I QL+ ++ + VS + +L IG Sbjct: 291 ------DPNTKTKGVLQGDATAQQIMFQLRQIVGSAVSGLTDTATYNGKTVTLNSLMAIG 344 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW-------- 397 I+T + L LD +KLT +K++A VG + + GI + + S Sbjct: 345 ISTSGKEATLSLDENKLTELIKQNAQAVGKIFT-NTANNGIIDNLKPYVESLAVYATANG 403 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + T I+ ++ L L + + +D + + +FTQL+ +M+ L + S++L Sbjct: 404 VHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWL 463 Query: 458 TQQFENNS 465 Q + + Sbjct: 464 AAQVSSLT 471 >UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitrosococcus oceani ATCC 19707 RepID=Q3J8M3_NITOC Length = 677 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 138/417 (33%), Positives = 216/417 (51%), Gaps = 33/417 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I+S G+GSGLD+ S+++ L AA+ ++ Q++ A LSA GTLKS L +F+ A + Sbjct: 2 ITSTGIGSGLDVESLVNQLVAAEGRPQQLRLNRQEAKMQATLSAMGTLKSELASFKDAVS 61 Query: 63 ALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L F A ++ + +A+ A A G Y++ V LAQAQ L ++ D + Sbjct: 62 KLDSPSAFQAIKASVGNRDLLTASAAAKAATGTYSVEVQQLAQAQKLASKAFADSSAALG 121 Query: 122 ATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 + ++ T D+ + I +A++SLSGIRDA+N A GV A+IIN G Sbjct: 122 TGTLSFRFGSYDNNTNTFTGNPDRTAQIVTIDSAHNSLSGIRDAVNEADIGVQANIINDG 181 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNG----MEVSVAA 222 G+ RL T+ GL N++ ++VS +D S + YD + + +G + +VAA Sbjct: 182 TGD-RLVFTAQTMGLANSLEITVSDEDGNNLDESGLSQLAYDPTGADSGSGKSLTETVAA 240 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNA 281 Q+A+L V+ + + NTI+ +E +TL LN TLT+ D A ++ +V A Sbjct: 241 QDARLVVDGLTVTRPQNTITGMIEGVTLELNSAELDSPTTLTVAADGHIASKSVNGFVEA 300 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYK 339 +NSL T +SL+ Y + ++ G LLGD++LR I+ +L+ + S+TV+ Y+ Sbjct: 301 FNSLAKTLNSLSSY-------NPETQEKGPLLGDASLRGIENRLRRVASDTVTGLSGPYR 353 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 TLA IGITT DG L+LD KL ++ D V L G G + Sbjct: 354 TLADIGITTQ-RDGTLKLDESKLQQVVESDPEAVARLFTGGGSSSDPLVRFVEATDE 409 Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 42/79 (53%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ + + L L + G ++ DG++ + ++ R+DA RY+ QFT LD Sbjct: 592 GVAAHLNTYLDQVLDSEGFLENRIDGLNHRIGDFSEQREDLVQRLDAIEKRYRAQFTVLD 651 Query: 445 VLMTSLNSTSSYLTQQFEN 463 L+ L +TSS+L+QQ N Sbjct: 652 SLLGQLQTTSSFLSQQIAN 670 >UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31230 Length = 475 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 122/498 (24%), Positives = 197/498 (39%), Gaps = 55/498 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ SGL+ I++ + A +K + N+Q K ++ L Q A Sbjct: 1 MAGINFSGIASGLNTGEIIEQMMAIEKRPRILLDNKQVLIETKQGLLRDFQTKLRALQLA 60 Query: 61 NTALSKADLFSATST--TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 T L L++ T + +S T SA++ A G Y I V+ LA A T TR Sbjct: 61 ATDLRSVSLWTQTQSVESSDATKVSASSTSGAGVGGYQIEVSQLANAAQRTYTFTRPAAD 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGEYR 177 I I+ G + + AIN + A V A+ + G Sbjct: 121 GTITVDGHSTAIRAG--------------MTAQEVATAINTDRDAKVYAAATDDGT---- 162 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L ++S TG A + V+ D A G + ++A T++ V++ +S Sbjct: 163 LVLSSRATGDTGAGFIDVTSDGG-----AIAAKLDRGGARIERQGRDALYTLDGVSLRSS 217 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQ-----DTSKAQTAIKDWVNAYNSLIDTFSSL 292 SN I D L +TL L VTT + +TI+ + + ++ +V AYN+ ID Sbjct: 218 SNVIRDGLAGVTLTLRGVTTASGPVTISVGAPGANVEAIRRKLEAFVEAYNATIDLIRGK 277 Query: 293 TKYTAVDAGADSQ-------------SSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 + V Q G L GD L + + L+ + + VS + Sbjct: 278 LEERTVPDPRSQQDIKNGVADPRTTAQKKAGTLFGDRQLAGMLSDLRQGIYSPVSGLPTG 337 Query: 338 YKTLAQIGITT---------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 +L+ IGI+T D G+L +D D+LT AL +D +GV L+ G G Sbjct: 338 MDSLSSIGISTGAFSASTSRDTLAGRLTIDTDRLTKALTEDPTGVRNLLQGVNNTDGWAR 397 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 L + G++ DG L L + R+ + QFT L+V ++ Sbjct: 398 RFEGLLNDRTKSDGMLDNRIDGADDELRMLRRQMEQMDVRLALREKNLNAQFTALEVAIS 457 Query: 449 SLNSTSSYLTQQFENNSN 466 + +L+ Q +N Sbjct: 458 RARTQGDWLSGQLAGLNN 475 >UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax=Geobacter RepID=Q39YI7_GEOMG Length = 487 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 126/477 (26%), Positives = 225/477 (47%), Gaps = 32/477 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G+ +GLD SSI+ L ++ + +Q + ++S + +++AL +FQ Sbjct: 16 MANISISGLVTGLDSSSIISQLMQLERTPERIMKAKQQKYQNQISEFQKIETALKSFQKV 75 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + F + +T + + +A+ + A G +T+ VT LA+ Q + T Sbjct: 76 VKGFNTLGNFKSMQTTVADNSVLTASGSSTATPGTHTVQVTTLAKNQRQVSMGVASQTDK 135 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN-GEYRL 178 T +T G T+ I+ +SL I AIN + A V+ASIIN G+ YRL Sbjct: 136 VFNTGSFTITDSAG---KTTTVSIAEGQNSLGDIVSAINTSGANVTASIINDGSPTPYRL 192 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 VT DT + + S + A A L V+ + + +S Sbjct: 193 VVTGKDT-NNYTLDFSGLTTPPAGGTGSLLPTMLGPSDPSYQAGTAATLVVDGITMTKTS 251 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 NT++DA++ ITLNL + T+ + DTS I +++++YN +I+ + + Y Sbjct: 252 NTVTDAIQGITLNLLKEGS-TTTVNVANDTSAVTNKINEFISSYNDVINLVNKQSIY--- 307 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDGKLE 356 + + + G L GDST+RTIQ++L+S+LS TVS Y +LA +GIT+D DG L Sbjct: 308 ----NPDTKTAGVLSGDSTVRTIQSKLQSLLSTTVSGVTGPYTSLASLGITSDKKDGTLS 363 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKT----------------GITTTIGSNLTSWLST 400 +D+ L++AL + V L + I + + + + +ST Sbjct: 364 VDSTALSSALSTNFEAVADLFTHNTGTYTTLPSNQYGIAQQFNLAIDSMVSPYIGTGVST 423 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 G+I+ G++ +++ + ++ RI+ + + QFT ++ ++ L + + L Sbjct: 424 NGLIETRIKGLNTSISDINDQIDSLESRIEKMQSNLQLQFTNMETTVSKLQTQGNSL 480 >UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z367_9GAMM Length = 493 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 269/492 (54%), Gaps = 41/492 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+ G+GSG+D+ ++ L A++ + ++ T +SA+GT K +L+ Q++ Sbjct: 2 VSATGLGSGIDIEGLVTGLVNAERVPAEQRLVQREVKVTTLVSAFGTAKGSLSDLQSSIA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGK-YTISVTHLAQAQTLTTRTTRDDTKTA- 120 L +S S TSS ++ A +A ++ Y + VT+LA+ Q+ + Sbjct: 62 ELKSLTTYSKISATSSASSKVAVSATSSAQAASYQVGVTNLAETQSFASTAYASTATFGT 121 Query: 121 -------------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 T D+ T K + + I+++N++LSGIRDAIN A AGVSAS Sbjct: 122 GTLTLTLGTPTYNGTTPDTYDTFTADSTKTAVNVSITSSNNTLSGIRDAINTADAGVSAS 181 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA---------LQSFMGYDASASSNGMEV 218 +I G +RL +T+++TG+ N++ ++ G A L SF A+ +S+G++ Sbjct: 182 LIKDGTN-FRLLLTTDETGVANSVQITSGGISADVGGADVASLSSFDFDTATTTSDGLQQ 240 Query: 219 SVAAQNAQLTVNNVAI-ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 + AA+NA ++N +A ++SNT++DA+ +TL L T + ++T++ + +AI Sbjct: 241 TQAAENAAFSINGLAGLTSASNTVTDAVTGVTLTLKATTDTDASITVSANQGAITSAIDK 300 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 +V YN ID F+ LT Y ++ + + GAL GD + R+I + ++S ++NTV Sbjct: 301 FVAGYNGYIDIFNQLTDY-------NATAKTRGALQGDFSARSIMSNVRSAIANTVPGLD 353 Query: 336 SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV----GDGKKTGITTTIG 391 SY++LA IGI TD G+L +D+ KL AAL D V + TG+ + Sbjct: 354 GSYRSLADIGIVTDAK-GQLSVDSTKLNAALAADPDAVTGMFADTTYNGTAVTGVAARLD 412 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + LT +L++ GI+++ TD +SK+L+++ D + R+D+ ARY+ QF +D L++++ Sbjct: 413 TILTDYLASDGILESRTDSLSKSLSRINDDRAVVARRLDSLEARYRAQFNAMDSLLSNIT 472 Query: 452 STSSYLTQQFEN 463 +T +LTQQ +N Sbjct: 473 ATGDFLTQQLKN 484 >UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IYG0_COMTE Length = 480 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 132/487 (27%), Positives = 232/487 (47%), Gaps = 32/487 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 2 GISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQLD 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+K + + TSS +A + T NA+ Y + V+ +A QT+ + +T Sbjct: 62 KLAKPATWLGNTLTSSNSAQVAGTATSNAVQATYDVKVSQMASGQTIGSSLVTSNTTLGA 121 Query: 122 AT-------------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T K + G T+ I+ ++SL+ I IN K VSA++ Sbjct: 122 GTLTISMGQWDSKAIGGFKANTNKDGSDVKFTVTITDTDNSLAKIAAKINAEKGDVSATV 181 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ-SFMGYDASASSNGMEVSVAAQNAQL 227 + GE RL + S TG ++A + +G Q ++ G DA+A+ GM+ S AQ+ Sbjct: 182 LTDHTGE-RLVLQSKTTGTNSAFKVEATGAGLQQFAYNGTDAAANETGMKRSAIAQDTLA 240 Query: 228 TVNNVAIENSSNTISDALENITLNLND---VTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 T+N + + + +N + +TL ++ +TI DT+ A+TA+K+ V +YN+ Sbjct: 241 TINGIEMASHTNVFEEVAAGVTLTVSQKMAAADAPVRITIANDTATAKTALKNLVESYNA 300 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQ 343 L + ++T Y D S + G L GDST +Q+ ++ +LS ++ +L+Q Sbjct: 301 LSNALKTMTAY-------DKDSKTAGTLQGDSTAVNLQSAMRRLLSGPGGEGGAFTSLSQ 353 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLST 400 +GI +DG L++D KL ALK D + D + G+ + + L+T Sbjct: 354 MGIAFQ-TDGTLKIDDTKLDKALK-DPESMSKFFTADVADANQDGLAVRMKDFTSGLLAT 411 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 G + + L + T D + R+ A AR + Q+++LD M SL S +Y++QQ Sbjct: 412 GGTFSTKDETLKNALKRNTADQERQTARVTAYEARVRAQYSRLDTQMASLKSLDTYVSQQ 471 Query: 461 FENNSNS 467 + S Sbjct: 472 VAAWNKS 478 >UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZP6_DESAC Length = 488 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 129/497 (25%), Positives = 240/497 (48%), Gaps = 54/497 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ +GL+ I+ L ++A L + Q+ + +L+A+ L S L + A Sbjct: 1 MAGITFSGLATGLETDDIITELMTLERAPLDRLEAQKEAEATRLAAFKQLDSRLEDLRAA 60 Query: 61 NTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ +++ ++ + SS A +A++ G A +G Y I+V LAQ Q + DT Sbjct: 61 VGDLNITSEVRTSRISLSSEDALTASSNG-AASGSYDITVVQLAQMQKSVSVGVSSDTVA 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNG--E 175 + T T G TI + +N+SL G+ D+IN + K GV ASIIN G+G Sbjct: 120 GLGTG----TFTVAGK----TITVDESNNSLQGLADSINALSEKTGVEASIINDGSGANA 171 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 Y L +T D + T S + D+ + + ++ + + +AQ A V+ + + Sbjct: 172 YHLVLTGQD--AQTSFTASSNLVDSEGAVLPFN-------LTETRSAQQAVAYVDGIQVV 222 Query: 236 NSSNTISDALENITLNLNDVTTG----------------------NQTLTITQDTSKAQT 273 + +NT+S + +T++L+ V+ + +T+ DT + Sbjct: 223 SDTNTVSGVIPGVTMHLSSVSDTSYSGTYEAGVDPWEWADPPQYDSTLMTVEPDTEALKE 282 Query: 274 AIKDWVNAYNSLIDTFSS------LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 + +V++YN+++D S+ +A D A ++ + + GDST+ I+ QL++ Sbjct: 283 KVSTFVSSYNAVMDWISAGYDEFGAAAPSAEDIEAGAEDILSDVVRGDSTVNGIKRQLQN 342 Query: 328 MLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGI 386 +LS+ + ++ S L+Q+GI+T DG + L+ AL+KD GV +L+ G+ G+ Sbjct: 343 ILSSQIDTTGSMSVLSQLGISTQ-RDGSINLNDSAFNEALEKDFDGVVSLLAGENDTEGV 401 Query: 387 TTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + L T+G+ + + +L ID + A + +F+ L++ Sbjct: 402 MKKFNTKLLEMTGATSGMYAEKQERYDSAIKRLDNQIARTEPLIDKKEATLRAKFSALEL 461 Query: 446 LMTSLNSTSSYLTQQFE 462 L++ +NS SS+LTQQ + Sbjct: 462 LVSDMNSQSSFLTQQMD 478 >UniRef50_C5D7S5 Flagellar hook-associated 2 domain protein n=7 Tax=Bacillaceae RepID=C5D7S5_GEOSW Length = 528 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 110/528 (20%), Positives = 193/528 (36%), Gaps = 72/528 (13%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS + G+ SG+D+ I+ L ++ L + ++ + Y + L T Sbjct: 1 MASNMRIGGLASGMDIDQIVKDLMKVERMPLDKLKQKKQILEWQRDDYREMNKLLQELDT 60 Query: 60 ANTA--LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDD 116 ++ T T+S + +A I ++T LA A T+ T Sbjct: 61 LIFDGIYRQSTFMKKTVTSSDESVVTAVATSVTANQNVEIGNITQLASAARWTSTTQITT 120 Query: 117 -----------TKTAIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGI 153 T + + + I I N SL+ I Sbjct: 121 DNGNIDPNAKLNSVTFTTGNGSFQFSDPITLTLNVKKPGSTTAETVEISIDPQNDSLNSI 180 Query: 154 RDAIN-NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 +N NAK GVSA ++ +T N+TG ++ + GD D+ Sbjct: 181 IIKLNQNAKLGVSAFYDEF---TKKMVITKNETGSGASIEVVSGGDLLQALGFAIDSVTD 237 Query: 213 SNGMEVSV-------AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTI 264 N + + +NA T+N + E ++NT + +T L +V TG T++ Sbjct: 238 PNTNTTTNVLRQDPDSGKNAIFTINGLQTERTTNTF--MINGMTYTLKNVKPTGTVTIST 295 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQSS 307 DT +IK +V+ YN +I ++ K T + + Sbjct: 296 ATDTDSIFNSIKAFVDKYNEVIGKINAELKEERYRNYPPLTDEQKEAMTEKQIELWEEKA 355 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPS---DGKLELDADKL 362 +G L GDS L + ++++ L +V S + LA+IGITT + GKL +D KL Sbjct: 356 RSGMLRGDSILSSGLSKMRMDLYTSVQGVASGFSQLAEIGITTSSNYLDGGKLIIDETKL 415 Query: 363 TAALKKDASGVGALIVGDG---KKTGITTTIGSNLTSWLSTTGIIKAATD------GVSK 413 ++++ + + L D + GI + + + T + + Sbjct: 416 RQKIQENPNAIYRLFNNDSTNYSEKGIVRRLRDTIKDTIRKVEQKAGKTLWTNQQFAIGR 475 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 L ++ + DR+ RY QFT ++ + N S YL F Sbjct: 476 DLIQIDNQIDRFEDRLKQIEDRYWRQFTAMEKAIQRANEQSMYLMNAF 523 >UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax=Cupriavidus RepID=Q1LL30_RALME Length = 498 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 197/492 (40%), Positives = 293/492 (59%), Gaps = 40/492 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 IS+LGVGSGLDLSS+LD LT A++A LT I+ +Q S+ KLSAYG ++S L FQ + + Sbjct: 16 ISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQ 75 Query: 64 LSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTR-------- 114 L+ F AT+ +SS TA SA + A G Y ++VT LAQAQ+L ++ Sbjct: 76 LASQSFFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKGQANQAAAIGT 135 Query: 115 ----------------DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN 158 +T +A + + T + I I +++++L GI AIN Sbjct: 136 GTIHVDFGSISGGTLDSNTSSATYGTYTGATFTANSANTGVDITIDSSHNTLQGIASAIN 195 Query: 159 NAKAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLS---VSGDDALQSFMGYDASASSN 214 NA AGV+ASIIN G+G YRL + SN+TG N++ LS G AL + +GYD + + N Sbjct: 196 NANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGTALANLVGYDPAGTQN 255 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 ++ +VAAQN+QLTVNN+AI+++SNT+SDA+ +T+ L TG ++++ +DTS T Sbjct: 256 -LQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTL--AQTGTSSVSVQRDTSSIMTG 312 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 I+ +V AYN+L T +SL+ Y D + + L GDSTL +Q+Q++S+L+ S Sbjct: 313 IQGFVTAYNNLQSTSASLSAY-------DPSTQTASPLTGDSTLSIMQSQMRSLLNTPQS 365 Query: 335 SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 +++ TL+QIGI+ DG L +D KLT AL +A V L +G I + + Sbjct: 366 NNALTTLSQIGISFQ-DDGTLAVDTSKLTTALNNNAGAVANLFGNTDGVSGYGNQISTLV 424 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 + S+TG + AT G++ TL L+ Y+ +I+A +A YK QFTQLDV+M+ + STS Sbjct: 425 KNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQMQSTS 484 Query: 455 SYLTQQFENNSN 466 +YLTQQF +S+ Sbjct: 485 AYLTQQFSTSSS 496 >UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII3_THIDA Length = 665 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 146/417 (35%), Positives = 227/417 (54%), Gaps = 37/417 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ SS+ LD+SSI+ L A ++ LT ++ +++ + A+LSAYG++K A+++FQ A Sbjct: 1 MATTSSV-----LDISSIVSQLMAVERRPLTKLAAREAGYQARLSAYGSVKGAVSSFQAA 55 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 AL+ F + T+T S + FSA+ A+ G Y+I V LAQ Q L + Sbjct: 56 LQALNSPSKFQSVTATASDSAVFSASATSTAVPGTYSIEVATLAQPQKLVAAGQASSSAA 115 Query: 120 AIATSDSKLTIQQGG-------------------DKDPITIDISAANSSLSGIRDAINNA 160 + + +T G +I I ++N+SL GIRDAIN A Sbjct: 116 IGGGTATTVTFDFGTISGGTLANGVYSGASFVSNGDGTKSITIDSSNNSLLGIRDAINAA 175 Query: 161 KAGVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 K GV+A+I+N G+G YRL++ ++ G+D ++ +SVSGD A+ S + +D N + + Sbjct: 176 KIGVAATIVNDGSGSPYRLALAADHNGVDQSLKISVSGDAAIDSLLAHDPGGVQN-LTET 234 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 AAQNA L +N V + +SNTISDA+E +TLNLN VT+ +LT+ +DT+ + +I +V Sbjct: 235 AAAQNANLKINGVTVTKTSNTISDAVEGVTLNLNKVTSSPASLTVARDTNSIKASINSFV 294 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 AYN L T +++ Y D+ + L GD+T+R++QTQL++M+ V Sbjct: 295 KAYNELSGTLKNVSAY-------DAAAKKGAILQGDATVRSLQTQLRAMIGAPVEGAPGD 347 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 KTLA IGIT DG L +D KL+ A+ + +L G T + S Sbjct: 348 LKTLASIGITFQ-KDGTLGVDQGKLSTAIADHFDEIASLFTTVGSSTDSLVSFSSGT 403 Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 45/81 (55%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 G T+ S ++ L + II A TDG+ +++ + K + R+ RY+ QF Sbjct: 578 SQGYAATLNSWASAVLDSDSIISARTDGIDRSIKDVAKRRSEFEARLVNMEKRYRAQFVA 637 Query: 443 LDVLMTSLNSTSSYLTQQFEN 463 LD ++ S+N+TS+YLTQQ N Sbjct: 638 LDSMLASMNNTSNYLTQQLAN 658 Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 8/176 (4%) Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 A LF+ +++ + ++ + AG Y + VT +A Q T T A S+ Sbjct: 383 ASLFTTVGSSTDSLVSFSSGTRSTKAGSYALDVTQVAT-QGKTVGKTISVPLVIAAGSND 441 Query: 127 KLTIQQGGDKDPITI---DISAANSSLSGIRDAINNAKAGVSASI-INVGNGEYRLSVTS 182 L + G + + + A + + ++ IN A A A + + V +L++TS Sbjct: 442 TLNLSIDGVGASVELSPGTYTTAGALAAELQTKINGAAALSGAGVSVAVSESAGKLTITS 501 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 G + + +S + +G D A S+G++V+ + + + SS Sbjct: 502 VKYGSGSTVLIS---GGTAEVSLGLDGDAPSDGVDVAGTIAGVTASGSGQVLTASS 554 >UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI2_OCEIH Length = 493 Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 106/498 (21%), Positives = 198/498 (39%), Gaps = 48/498 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D SI+ L A++ L + ++ + A+ + L+ Sbjct: 1 MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLD 60 Query: 64 LSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT--TRDDTKT- 119 + + +++ +S+ + A AT A G Y+I+V+ LA + + D KT Sbjct: 61 MKLSSTYNSKLISSTQSDAVKATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTL 120 Query: 120 ---AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGE 175 I T + G++ T I + +L + +N + ++ + S N Sbjct: 121 HEQGITEDVEFTTFDKDGNEQTHTYKIEEGD-TLKDLMKKVNDDKESPIRMSYDENAN-- 177 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L + + TG N SG + + AS + ME NA+ T NN A E Sbjct: 178 -KLIMETTRTGQYNE-----SGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNN-AYE 230 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS----- 290 S +L +T D T GN TLT+ D + I +V+ YN +++T + Sbjct: 231 TESRDNQYSLNGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQE 290 Query: 291 ------------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SS 337 + T + + + +G L G+S+L ++ +TV+ + Sbjct: 291 EKYRDFPPLTEEQKKEMTEREIELWEEKAKSGLLKGESSLSNGLFNMRESWYSTVNGDGA 350 Query: 338 YKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALI--VGDGKKTGITTTIGS 392 +K+L +IGITT + GKL +D L A+ D V L +G G+ + + Sbjct: 351 FKSLTEIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGDDRGLINRLEN 410 Query: 393 NLTSWLSTTGIIKAA-------TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + S + + + K + + R++ ARY QF++++ Sbjct: 411 AVESTMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMER 470 Query: 446 LMTSLNSTSSYLTQQFEN 463 ++ +N SS L F + Sbjct: 471 AISMMNQQSSMLMSNFGS 488 >UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax=Anaeromyxobacter RepID=Q2IQN2_ANADE Length = 452 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 135/464 (29%), Positives = 212/464 (45%), Gaps = 27/464 (5%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 AS + G+ SG+D ++I+D L A + L + +Q++F ++SA G + ++L+ A Sbjct: 3 ASFRAGGLASGMDTNAIIDQLVALESRPLDQLRRRQAAFRTQISALGDIAASLSGLSAAA 62 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + AT S++TAFSA +AIAG Y ++V LAQ + A Sbjct: 63 ADLGDHGVL-ATQARSTSTAFSAAPGADAIAGSYRLAVKALAQPAKWRSAAFAAGAGVAG 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T + QG PI + +SL+ + AI + A VSA +++ G + LSVT Sbjct: 122 GTLRLTV---QGTAVAPIAV---PDGASLADVAYAIRQSGAAVSAVVLDDGTSSW-LSVT 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--GMEVSVAAQNAQLTVNNVAIENSSN 239 + DTG L + DAL A A G A+NAQ+ V+ + + N Sbjct: 175 ARDTGHP----LDGAPADALSISFTPSAGAVGQAPGFAELQPARNAQVEVDGLTFTRTGN 230 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 I+DAL +TL L + L + D + Q ++ V+ YN ++ Sbjct: 231 VIADALPGVTLTLAAAGGPAEDLVLGTDPAGTQARLQKLVDGYNGVMRLLQ-------RH 283 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDGKLEL 357 S L GDSTLRT+Q +L+ +L V S +TLA +G+ T DG L + Sbjct: 284 LAVAKDSDRATTLAGDSTLRTLQARLQRVLVTEVPGLSSGVRTLADLGVRT-GRDGSLSV 342 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLN 416 DA L++AL +D + AL G TG+ + + + + G + DG+ +T+ Sbjct: 343 DAATLSSALARDPAAANALFSTSG--TGLAAVVKALVADHTRAGDGALVLRQDGLGRTVK 400 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 L A RIDA QFT ++ ++ L S S+L Q Sbjct: 401 DLDGQAAALQLRIDAFQQNLIRQFTAMESTVSGLKSIGSFLAGQ 444 >UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WCE3_ACISJ Length = 479 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 140/484 (28%), Positives = 223/484 (46%), Gaps = 37/484 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SS G+GSGL + I+ L A ++ + + + S KLS + +KS ++T A Sbjct: 2 GLSSTGIGSGLQVEDIVSKLVALERQPIAKLQSVALSMQTKLSIFSQVKSMMSTLSDAAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LSK + TSS +A + + G A A + I V LA+A + + Sbjct: 62 KLSKNSTWGGMVATSSNSAAVSVSVIGAASATSFGIGVQQLARA---QSAASASLGAPGA 118 Query: 122 ATSDSKLTIQQGGDKDPITIDIS-------------AANSSLSGIRDAINNAKAGVSASI 168 + L+IQ G T A SL+ I IN AKAGV+A++ Sbjct: 119 SVGGGSLSIQLGTWTGTDTASPQFTEGAAGAVPVQIDAGDSLATIASKINGAKAGVTATV 178 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTL--SVSGDDALQSFMGYDASASSNG---MEVSVAAQ 223 + NGE RL V S+ TG + + + G S + +D + AQ Sbjct: 179 LRDANGE-RLLVRSDSTGASSGFRIRVTEDGAAPGLSNLAFDPQGAPGAGMAANAIQYAQ 237 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 NAQ TVN +A+E+++NT +D + ++ + +TT + + DT + I+D+VNAYN Sbjct: 238 NAQATVNGIAVESATNTFTDTIPGLSFTASQITTAPVEVAVGSDTETLKKNIQDFVNAYN 297 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLA 342 L D + TKY DS S + GAL GD T +Q L+SM+++T +++ LA Sbjct: 298 GLNDLLGASTKY-------DSASKTAGALQGDGTTVALQNTLRSMIASTAEGTGAFQRLA 350 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD----GKKTGITTTIGSNLTSWL 398 IGI + GKLE+ ADKL AALK + + AL + + G+ + + L Sbjct: 351 DIGIDI-KTGGKLEVSADKLDAALK-NPEALKALFATNVGSGSQANGLAVKMKALADQML 408 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 G++ + ++ + D + +R R + Q+T LD M SL+ +Y+ Sbjct: 409 LPEGLLDNKASALGASIKRNKSDQDRVDERASIMEKRLRAQYTALDAKMASLSGLGAYVG 468 Query: 459 QQFE 462 QQ Sbjct: 469 QQVS 472 >UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 Tax=Marinobacter RepID=A1U3U6_MARAV Length = 657 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 128/393 (32%), Positives = 207/393 (52%), Gaps = 22/393 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+IS+LG+GSG+ S ++D L A++A + + +SAYGTLKSA+T + Sbjct: 1 MANISALGIGSGVLNSDLVDQLVEAERAPTENRLDTRTQKAELLISAYGTLKSAITELRL 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 LS D A S TSS S T A G Y ++V LAQ+Q+L + T D Sbjct: 61 PMRQLSAPDNLKAFSATSSNEDVSVTVDSTKASRGTYNVNVLSLAQSQSLASSTFADRDS 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 T++ T TI G +TID +N++L G+ D IN A GVSA +I+ G+G +RL Sbjct: 121 TSVGT--GSFTISSGDKSATLTID--GSNNTLQGLADEINEAGIGVSAGVIDTGSG-FRL 175 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMG----YDASASSNGMEVSVAAQNAQLTVNNVAI 234 ++S +TG NA+++SV+ DD + + ++ M+ ++AA++A++ +N + I Sbjct: 176 VLSSEETGEANAISVSVTDDDGNNDDAAGLSQFVFNDTTQNMQETIAAKDARVEINGIEI 235 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 S+N+ +D ++ ++ T+ + QD + +V +N+L T L+ Sbjct: 236 TRSTNSFTDVIDGLSFEAKAEGV-TSTIKVEQDFGAVADRVGAFVEKFNALQTTIKGLS- 293 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPS 351 G ++++ G L GD+T+R+IQ QL+++L V +S +TLA +GITTD Sbjct: 294 ------GFNAETGQGGILSGDTTIRSIQAQLRNVLGRVVPGLENASIRTLADVGITTDYE 347 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 G L D K LKK+ V AL G+ + Sbjct: 348 TGGLSFDRAKFEEQLKKNPDDVTALFAEQGRTS 380 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 GI + +T + GI+ A TD +S+ L ++ ++ DRI + R QFT D Sbjct: 570 GIGEQAVNLVTDIVGADGILDAKTDSLSRDLERIQEERIRLEDRIASYRERLVSQFTAAD 629 Query: 445 VLMTSLNSTSSYLTQQFE-----NNSN 466 L++ LNST YLTQQ NNSN Sbjct: 630 SLISQLNSTGDYLTQQLAALAPQNNSN 656 >UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BQ50_DELAS Length = 473 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 145/483 (30%), Positives = 237/483 (49%), Gaps = 35/483 (7%) Query: 1 MASISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA++SS G+ GSGLD +++ L A Q+ +L P+ + S +K+S +G +KS ++T Q Sbjct: 1 MATLSSAGISGSGLD-ETMIAKLVALQRQSLVPLQQKASVLDSKISTFGQIKSLMSTLQD 59 Query: 60 ANTALSKADLFSATSTTSSTTAFSAT-TAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A T+L+ AD + T+ ++ +A + + T NA+ G ISV LA++Q++ T DT+ Sbjct: 60 AATSLANADTWRLTNAATTNSAVAVSVTDANALPGSSVISVNKLARSQSVATGIMPKDTQ 119 Query: 119 TAIATSDSKL------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 + Q P+ IDI AA + L + AIN+ AGV AS++ Sbjct: 120 FGAGKLTITMGAWNANGTQFSNPGTPLDIDI-AAGAKLEDVVQAINSKGAGVVASVLKDA 178 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 GE RL + S TG D+ T+ SGD +L + A+ S V+ AQNA+LTVN + Sbjct: 179 QGE-RLVLRSRSTGADSGFTVDASGDSSLSALAFNGAATSG---SVAQYAQNAELTVNGI 234 Query: 233 AIENSSNTISDALENITLNLNDVT--TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 +++++N L + + +N T T+T++ DT + I+ +++AYN+L D S Sbjct: 235 TVQSTTNEFKQTLPGLNITVNQETAPATPVTVTVSSDTDGMKKKIQAFMDAYNALNDALS 294 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITT 348 S TKY D++S G L GDST + L+S++S TV + K L+ +GI Sbjct: 295 SSTKY-------DAESKVAGLLQGDSTTVGMTNSLRSVVSGTVDGGADTLKRLSDMGIQI 347 Query: 349 DP----SDGKLELDADKLTAALKKDASGVGALIV-----GDGKKTGITTTIGSNLTSWLS 399 + G D KL AALK D + + G G+ + L Sbjct: 348 QKGGKLAYGTTASDKTKLDAALK-DPESMSKMFAAVGTDGQPNTQGLAARMKDFTRKALE 406 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 G + + + K + +D+ D+ R +EQ+ LD M+ ++ S+Y+ Q Sbjct: 407 FDGTFDTKSKSLQELKKSNGKSQDRINDQADSLEKRLREQYASLDKKMSGYSALSAYMNQ 466 Query: 460 QFE 462 Q Sbjct: 467 QVS 469 >UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6U7_BREBN Length = 503 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 108/507 (21%), Positives = 197/507 (38%), Gaps = 50/507 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I G+ SG+D ++ + AQ+ + + + S K AY + + L Q Sbjct: 2 GIRLTGMASGMDTEKMIKDMMKAQRQPVNRLEKSKISTEWKRDAYREMNTLLADLQKTVN 61 Query: 63 ALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + + F+ +S A SA G Y+I V LA+++ + Sbjct: 62 DIRYSANFNKKVASSENDAIASAKVTGTPKLSSYSIEVQKLAKSEMPASMQFDIAASITS 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + + + D D A ++ + IN + GV A ++ N S+ Sbjct: 122 SKQQLGASFEFAIDGDTANTIKVEATDTIDSVIAKINGSGKGVEA--FHIDNKLVIKSIN 179 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 N+ G DN + V G S +G A+A+SN VA ++A + +N V + SN Sbjct: 180 GNNLGGDNQFDIKVQGG-GDGSVLGMTAAATSNPSSTRVAGEDAVVVINGVKQTSKSNVF 238 Query: 242 SDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT---KYTA 297 + + + + TGN T+ D +IK +V YN++I+T + KY Sbjct: 239 K--YDGVEFTVKTINTGNPLTINAKTDEEAVFNSIKGFVEKYNNVIETINKKITEPKYKG 296 Query: 298 VDAGADSQS--------------SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK---- 339 D + + +G L+ DS L + +++ +S ++ + Sbjct: 297 YQPLLDEEKEALGDKTAEKMDKMAMSGILIRDSYLTSALNEMRRSISAPLTGTGVNSAFD 356 Query: 340 TLAQIGI-------TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT-------- 384 TL++IGI + +GKL L+ +KL A+ + + V L T Sbjct: 357 TLSEIGIGGPPTGKSAYQENGKLYLNEEKLRNAISNNGADVVKLFTSFSSSTDTGTKYNE 416 Query: 385 -GITTTIGSNLTSWLST------TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 GI + SNL+ +S +G + +SK + ++ D + DR+ RY Sbjct: 417 SGIAERLYSNLSKAMSDITKQAGSGTVVNDDSYLSKKIGQMADDIKSWEDRLKIIENRYY 476 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENN 464 +Q+ ++ M+ S S+ Q Sbjct: 477 KQYAAMETAMSKAQSQGSWFAQMLGQK 503 >UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina RepID=Q5QZT2_IDILO Length = 463 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 116/476 (24%), Positives = 219/476 (46%), Gaps = 35/476 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M +SSLG SGLDL I+ + A++ + Q+ +LSA G +KS L+ Q Sbjct: 1 MPLVSSLGARSGLDLEGIVSATLNAERVPKQNRLDQQEGRLQVELSAVGEMKSVLSKLQE 60 Query: 60 ANTALSKADLFSATSTTS----STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR-TTR 114 A LS +LFSA + S + + +A G + ISVT LA+ + Sbjct: 61 AAEKLSSGELFSAMKASVKQPESGDVITVESTEDAGVGNFDISVTQLAKGSRAVSADGAF 120 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVG 172 +++ + T+ LT G + + I+ A SSL IR A+N++ GV+A IIN G Sbjct: 121 ANSEDEVNTNAGSLTFGAGDESFTLNIE---AGSSLEDIRKAVNSSQDNFGVTADIINTG 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQ-SFMGYDASASSNGMEVSVAAQNAQLTVNN 231 E +L SN +G N +T++ + S A + + A +A + ++ Sbjct: 178 T-EAKLIFRSNVSGEGNDLTVTNDNAEFDAISTQANGGGAGGMSIAAADKATDAIIEIDG 236 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + +N +N D ++ T+ + +T L+I +D + +I +V AYN + + Sbjct: 237 IQAKNDTNIFEDVIQGSTITAVKESEDAETAKLSIARDEDGVKKSIDAFVKAYNGAVASL 296 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 + + N L GD+T+R ++ QL ++L++T +TL +G D Sbjct: 297 NEI-------------GGENSMLQGDATVRNLKGQLNNVLTSTFGEGG-QTLFDLGFGLD 342 Query: 350 PSDGKLELDA--DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 +GKLE + + LK + + + ++ G + G+ + + S L ++ G ++ Sbjct: 343 -KEGKLEAENPVTSFSEVLKNNPAALESVFGG---ENGLASRMDSFLDGYVGGGGSLELR 398 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 D ++++L+++ + R+++ + ++ LD L+ L S + ++ Q N Sbjct: 399 KDTINQSLDRVAESREDLKLRMESMEETLRAKYQALDSLVGQLQSRGNAVSAQLSN 454 >UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W111_9BACI Length = 513 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 113/518 (21%), Positives = 209/518 (40%), Gaps = 66/518 (12%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G +G+D++ ++ L A++ + + + ++ + T+ L TF+T Sbjct: 1 MRISGFATGMDINQMVTDLMRAERMPVDRMQQNKQLLEWRMEEFRTINRKLETFRTNIFD 60 Query: 64 --LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTIS-VTHLAQAQTLTTRTTRDDTKTA 120 A++ + T T+S + S T A NA G I+ V+ LA+++ L + +TA Sbjct: 61 GVFRSANMLAKTGTSSDESRVSVTAASNAQPGTMRINSVSSLAESEALVSEALTVSGETA 120 Query: 121 ---------IATSDSKLTIQQ------GGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 +SD + T++ G + T A+ + + IN++ G++ Sbjct: 121 TRQTTLADLTGSSDPEFTLEVTTRTSSGEKNETFTF---ASTDKVDDVLKKINSSDLGLN 177 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS-----NGMEVSV 220 A ++S + +TGL + G A D++ +S G V Sbjct: 178 AFF---DTQTGQISFSREETGLYDENGSLAMGGSADAQIAFADSTLASAFGVQEGQGTRV 234 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDV-TTGNQTLTITQDTSKAQTAIKDWV 279 A NA + +N + E +NT ++ +T+ L D ++ T+ DT K I D+V Sbjct: 235 AGSNAVVNINGIDTERGTNTFTE--NGLTITLRDTFSSDPVTIGSATDTDKIFDTIMDFV 292 Query: 280 NAYNSLIDTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQ 322 N YN L++ + + + + + + +G L D LR Sbjct: 293 NEYNELVEHVNEKLREDRNRDFRPLTDDQREALSEREIERWEEQAMSGMLRNDRILRGGF 352 Query: 323 TQLKSMLSNTVS---SSSYKTLAQIGITTD---PSDGKLELDADKLTAALKKDASGVGAL 376 Q +S + VS SS+ LAQIGITT GKLE++ D+L A + +D V L Sbjct: 353 DQFRSAMYTPVSLGEGSSFNQLAQIGITTTNNFRDGGKLEVNEDRLRAKINEDPDAVFRL 412 Query: 377 IVGDG---KKTGITTTIGSNLTSWLSTTGIIKAATDG--------VSKTLNKLTKDYNAA 425 DG + G+ I + S + + + G + + ++++ Sbjct: 413 FTADGSSQSEKGLARRIRESANSLIDSIAREAGGSRGRNLNHQFTLGRGMDQIDDRITNF 472 Query: 426 SDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 R++ RY QFT ++ + NS + L Q Sbjct: 473 ERRLEQVEQRYWSQFTAMEKAVAQSNSQAESLFAQMYG 510 >UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUD0_9GAMM Length = 682 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 146/418 (34%), Positives = 217/418 (51%), Gaps = 33/418 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA ISSLG+GSGLD+ ++D L AA++A ++ +++ A+LSAYG LKSAL+ FQ Sbjct: 1 MAGISSLGIGSGLDIGGLVDKLVAAEQAPVQNRLNRREAQVQAELSAYGNLKSALSGFQD 60 Query: 60 ANTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 LS+A F +T+S++ A + + + A G+ + V L + Sbjct: 61 KVQGLSQASDFRVLKATSSNSEAVAVSASSAATVGRLDLEVNQL-AQSQAVASAAFATSA 119 Query: 119 TAIATSDSKL--------------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGV 164 T + + L +Q DK TIDI AA +SL+GIRDAINNA AGV Sbjct: 120 TPVGSGTLTLRFGTVTTDVDGAVNGFKQNPDKAVATIDIPAAVNSLAGIRDAINNADAGV 179 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG----YDASASSNGMEVSV 220 SASIIN G GE RL + DTG N + V+ DD + + S+ + + Sbjct: 180 SASIINDGVGE-RLIFNTTDTGATNGFVIEVADDDGNNTDAAGLSQLAFNTSATQSQQAR 238 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 A Q+AQL VN +A+ +SN I+D +E +TL++ TT + +TQDT + I+ +V+ Sbjct: 239 AGQDAQLIVNGLAVSRASNQITDLIEGLTLSVQATTTSAARIDVTQDTDTVKEKIQGFVD 298 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSS 337 A+N L S LT + D++ G L GD+T+R I ++L + ++ + S + Sbjct: 299 AFNQLRQQISQLTSF-------DAEKKQGGVLQGDATVRGIDSRLFRLTTSEIPGLSGRA 351 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 ++LA +GITT SDG L +D KL+ AL+ VGAL G G N Sbjct: 352 IRSLADLGITT-ASDGTLAIDDAKLSGALEAHFDEVGALFGIGGLADGSGFRYVGNTD 408 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 86/434 (19%), Positives = 160/434 (36%), Gaps = 42/434 (9%) Query: 53 ALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQ-AQTLTTR 111 A++ T L + S +TT+S T + + K V Q Q ++ Sbjct: 251 AVSRASNQITDLIEGLTLSVQATTTSAARIDVTQDTDTVKEKIQGFVDAFNQLRQQISQL 310 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISA----ANSSLSGIRDA-INNAKAGVSA 166 T+ D K T++ G D + S + ++ + D I A G A Sbjct: 311 TSFDAEKKQGGVLQGDATVR-GIDSRLFRLTTSEIPGLSGRAIRSLADLGITTASDGTLA 369 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 I+ L ++ G + G A + V+ AQ A Sbjct: 370 --IDDAKLSGALEAHFDEVGALFGIGGLADGSGFRYVGNTDATRAGEYAVAVTRLAQQAS 427 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 + +A S + N TL L ++++ +T +Y S Sbjct: 428 IQGAGIAPPTSEAPLVIDASNDTLQLTVNGVTSESIQLTH-------------GSYTSGS 474 Query: 287 DTFSSLTKYTAVDAGADSQSSSNG-ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 D + L DA + A GD+ L ++ S + T++S + T + +G Sbjct: 475 DAAAELQARINGDANLKEAGARVSVAFSGDAFLIA-SSRYGSESTVTLNSVATNTPSSLG 533 Query: 346 ITTDPS----------DGKLELDADKLTAALKKDASGVGALIVGDGK--------KTGIT 387 ++ + DG L + +L AA + A G+ I G G++ Sbjct: 534 FSSGQTGTGADVEGTIDGAAALGSGRLLAAQEGRADGLKIEITGQSTGPLGTLTFTRGLS 593 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 I + L +L+ G++ + T+ +S+ ++ + +D + + R++ RY QF +D L+ Sbjct: 594 DQIDTTLGVYLNGDGLLDSLTESLSERIDAIGEDRDQLAARMEQVRQRYLNQFNAMDALV 653 Query: 448 TSLNSTSSYLTQQF 461 LN+T+S+L Q Sbjct: 654 AQLNTTASFLDNQL 667 >UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alteromonadales RepID=Q15R99_PSEA6 Length = 486 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 127/488 (26%), Positives = 229/488 (46%), Gaps = 43/488 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI SLGVGSGLDL +++ L A++ + +Q+ S+ A++S+ GTLKS + F + Sbjct: 2 SIQSLGVGSGLDLEALVSQLLEAERTPKQARLDSQEESYDAEISSIGTLKSKMKEFLDSV 61 Query: 62 TALSKADLFSA-----TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR----T 112 L + + + F+A + +A+ Y I+VT LA + T Sbjct: 62 DELRSDANLKGREPTIKNPSENIEPFTAEASNSAVEADYAIAVTQLANGSRIETDNAVDG 121 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIIN 170 T +++ LT + G D +I+++A +L + AIN++ GV +SII+ Sbjct: 122 GFSSTSDSVSAQAGSLTFKIGATTDTFSINVTAG-MTLQQLSSAINSSDDNFGVRSSIID 180 Query: 171 VGN--GEYRLSVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASASSNGMEVSVAAQNAQL 227 G G +L TS+ G N + + + L D++ ++ ++ +AQN++ Sbjct: 181 TGTASGGAKLVFTSSVQGEGNDLMIVNDNNIADLNRVATTDSTETAAYLDPVKSAQNSKA 240 Query: 228 TVNNVAIENSSNTISDALENITLNLN--------DVTTGNQTLTITQDTSKAQTAIKDWV 279 T++ +A+E+S+ + +EN++ ++ +T L I D + I+D+V Sbjct: 241 TIDGIAVESSTTEFENVIENVSFTVSQLSELDEDGITPKTSNLKIGFDAEGLEGKIRDFV 300 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 + +N+L ++LT+Y A D D GAL GDS +R IQ L +M+S VSSS Sbjct: 301 DNFNALNTQITTLTRYGASDLEED------GALAGDSMIRGIQQGLSNMISANVSSSGLG 354 Query: 340 TLAQIGITTDPSDGKLELD----------ADKLTAALKKDASGVGALIVGDGKKTGITTT 389 TL Q+GI + DG LE+ D+L AL+ + AL + G+ Sbjct: 355 TLFQLGIEFN-EDGDLEIGSSDKFGFGSGEDRLKDALEDSFDDIAALFA--DSENGVAVR 411 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + + + + +G++ + V ++L + R+ + ++++ LD + Sbjct: 412 MHDYIEQYTNYSGLLTSREKSVQDQKDQLADEREQFELRMASTEQILRDKYLNLDQTVAQ 471 Query: 450 LNSTSSYL 457 LN T S L Sbjct: 472 LNQTGSAL 479 >UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID2_PSEAE Length = 474 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 135/478 (28%), Positives = 234/478 (48%), Gaps = 28/478 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA IS +GVGS D + +++ + + A T ++ + + T +L+A G KSA++ FQT Sbjct: 1 MAGIS-IGVGS-TDYTDLVNKMVNLEGAAKTNQLATLEKTTTTRLTALGQFKSAISAFQT 58 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A TAL+ +F A + +S+ A+ +A+AG Y I V LA + + + D Sbjct: 59 ALTALNSNAVFMARTAKSSNEDILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPAN 118 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEY 176 + +++ GD I + ++N++L+G+RDAIN A AGVSA+II +G Sbjct: 119 AKFNSGTLNISV---GDTKLPAITVDSSNNTLAGMRDAINQAGKEAGVSATIITDNSGS- 174 Query: 177 RLSVTSNDTGLDNAMTLSVS----GDDALQSFMGYDASA-----SSNGMEVSVAAQNAQL 227 RL ++S TG + + VS G + S + +D + A N ++ Sbjct: 175 RLVLSSTKTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLSDGAAAGYVTKAANGEI 234 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSL 285 TV+ + +SN++SD ++ ++ ++ VT TLT+++D + + +K +V AYN+L Sbjct: 235 TVDGLKRSIASNSVSDVIDGVSFDVKAVTEAGKPITLTVSRDDAGVKDNVKKFVEAYNTL 294 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 + T T V + + GALLGD+++R + ++S L + + S + LA +G Sbjct: 295 TKFINEQTVVTKVGEDKNPVT---GALLGDASVRALVNTMRSELIASNENGSVRNLAALG 351 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 ITT DG LE+D KL A+ D GV + GD TG+ +G + + GI+ Sbjct: 352 ITT-TKDGTLEIDEKKLDKAISADFEGVASYFTGD---TGLAKRLGDKMKPYTDAQGILD 407 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 T + KTL+ + + R+ A + QF L + + +T + Sbjct: 408 QRTTTLQKTLSNVDTQKADLAKRLAALQEKLTTQFNLLSAMQDEMTKRQKSITDNLAS 465 >UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betaproteobacteria RepID=Q2Y9C9_NITMU Length = 669 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 133/423 (31%), Positives = 222/423 (52%), Gaps = 34/423 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +I++ G GS LD++ I+ L AA++ L + ++S + AKLSAYGTLK AL+ FQTA Sbjct: 2 AITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQ 61 Query: 63 ALSKADLFSATSTTSSTTAF---SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ ++A S +++ ++ + + G A+ G Y++ V LAQ Q + + T + Sbjct: 62 GLADPAKYNAVSASAADSSLLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFAS-TSS 120 Query: 120 AIATSDSKL----------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 + + + T K TI I ++++LSG+RDAIN A AGVSA+I+ Sbjct: 121 TVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTLSGVRDAINAANAGVSATIV 180 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDAS---ASSNGMEVSV 220 N G G +L +T+ D G +++ ++VS DD S + +D + S + Sbjct: 181 NDGAGN-KLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQ 239 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWV 279 AAQ+A+L ++ + I SSNTI+DA+E +TL+L G TL ++ DT+ A+TA++ +V Sbjct: 240 AAQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS-SY 338 +YNS+ T S+L+ Y + L GDS +IQ ++S L+ + S + Sbjct: 300 KSYNSINQTLSNLSAYNPG-------AKKGAILQGDSAAFSIQRGIRSALTAMMGDSRGF 352 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +L+QIG+T DG L +D+ KL A++ +G L G T + + Sbjct: 353 TSLSQIGVTLQ-KDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSLISYEGATDKTV 411 Query: 399 STT 401 + Sbjct: 412 AGN 414 Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + +L+T G+I +G++ ++ L + S R++ ARY+ QF+ LD Sbjct: 584 GYAERLSKVAEEFLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSALD 643 Query: 445 VLMTSLNSTSSYLTQQFEN 463 ++ SL TS +L QQ + Sbjct: 644 AMLGSLTQTSQFLQQQLAS 662 >UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1D6_DESAS Length = 504 Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 111/515 (21%), Positives = 218/515 (42%), Gaps = 65/515 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SG+D+ S++ L A++ L ++ ++ + + Y T+ S L + + A Sbjct: 3 SSLRISGLASGMDIDSMVKQLMKAERMRLDTLTQKKQTLEWQQEDYRTVNSLLRSLRDAT 62 Query: 62 TALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F + TS+ + TT +A+ G Y +SV+ LA+ LT Sbjct: 63 FNMKLQGTFLSRQATSNNESVVKVTTGTSAVDGTYEVSVSQLAKGAYLTGDKINSGNTAN 122 Query: 121 IAT------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA------KAGVSASI 168 + + K + G + TI + + ++ + IN+ GV AS Sbjct: 123 LKSQLNLTEGGEKTLVINGPNGTKKTITVDTDTAKMADLVAEINSGLDDSGNTWGVRASY 182 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 V + RL + + DTG D + + + + SS QNA Sbjct: 183 DAVND---RLFLMTKDTGADQTIAVEEGELAQALKLTSGNFAYSS--------GQNANYK 231 Query: 229 VNNVAIENSSNTISDALENITLNLNDVT-------TGNQTLTITQDTSKAQTAIKDWVNA 281 +N V +E ++NT++ + +TL++ V+ T+T++++T AIK++V+ Sbjct: 232 LNGVDLEAATNTVT--INGLTLDIKGVSAKDSGGDPTPTTVTVSRNTDAVYNAIKEFVDK 289 Query: 282 YNSLIDTFSS------LTKYTA-----------VDAGADSQSSSNGALLGDSTLRTIQTQ 324 YN I+ + T Y + + +G L DS L + ++ Sbjct: 290 YNETIEKVNKEYYEDRYTDYRPLTDTMRESLSDDQEEKWEEKARSGMLRFDSLLGSSLSK 349 Query: 325 LKSMLSNTVSSSS----YKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIV 378 +S L++ V + S Y L +IGITT +GKL + KL A++KD GV L Sbjct: 350 FRSTLNSAVDNVSSTENYNNLTKIGITTGSYQDNGKLIISEKKLKEAIQKDPDGVMDLFT 409 Query: 379 GDG---KKTGITTTIGSNLTSWLSTTGIIKAATDGV------SKTLNKLTKDYNAASDRI 429 G K+ G+ + ++T+ + + ++D + K + ++ D + Sbjct: 410 KSGDTYKEKGLAGRLYDDITNAMDSVIAKAGSSDSLVDDSVVGKQIKDVSNRITTMEDHL 469 Query: 430 DAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + RY ++F+ ++ ++ L+ S+++TQ Sbjct: 470 EDIEDRYYKKFSVMEEALSKLSQQSAWITQMLGGK 504 >UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 Tax=Enterobacteriaceae RepID=C6C371_DICDC Length = 499 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 201/457 (43%), Positives = 301/457 (65%), Gaps = 16/457 (3%) Query: 24 AAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS 83 + LT I+ +Q+S+ AKL+AYGTL+SAL TF TA ALS + L++ T+++T+ F+ Sbjct: 44 EVEDQKLTAITTKQTSYEAKLTAYGTLQSALETFSTATEALSDSSLYTTKKTSTNTS-FT 102 Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQG-GDKDPITID 142 AT A G Y++ VT LA AQTL + T T +S S T+ G + + Sbjct: 103 ATAESTASTGSYSVQVTQLATAQTLASATQSSKTTELGDSSLSSRTVTITVGSNTAVNVT 162 Query: 143 ISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 ++ + ++LSGI AIN+AKAGV+ASII G+ Y+L++TS+DTG + T+S S D L Sbjct: 163 LTNSQTTLSGIASAINSAKAGVTASIIQSGDSSYQLTLTSDDTGEASTFTVS-SDDTTLN 221 Query: 203 SFMGYD--ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA-LENITLNLNDVTTGN 259 +GYD ++++SNGM VAAQNA+LTVN ++IE SSNT++D E +TL L+ V++ Sbjct: 222 GIIGYDGDSTSTSNGMTEQVAAQNAKLTVNGISIERSSNTVTDVPAEGVTLELSSVSSSA 281 Query: 260 QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 +TLT+++ + A +A+ DWV+AYN+L+ +F++L+KYT+VDAG +SQSS NGAL+GDS L Sbjct: 282 ETLTVSKSITDAVSAVSDWVDAYNTLLSSFATLSKYTSVDAG-ESQSSDNGALVGDSVLS 340 Query: 320 TIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD---------GKLELDADKLTAALKKDA 370 +I+TQLKS+LS+ SS +YK + Q+GI+ + S G L LD + L AL +DA Sbjct: 341 SIKTQLKSLLSHAQSSDTYKVITQLGISIESSSKDDNDNTIYGTLSLDDETLINALTEDA 400 Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 S V VG+GK TG+ T + S ++++ G+I A +GV ++KL +Y A +I+ Sbjct: 401 SAVSDFFVGNGKTTGLATQMVSAISTYTDDDGVIDGAEEGVQSIIDKLADNYTATQSQIE 460 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 ++ARYK+QF LDVL++ LNSTS LT F+ ++S Sbjct: 461 TRMARYKKQFVALDVLVSELNSTSDTLTSMFDQLTSS 497 >UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221C0_RHOFD Length = 495 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 131/504 (25%), Positives = 237/504 (47%), Gaps = 48/504 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISS G+GSGLD++SI+ L A +K L ++ + ++ ++SA+G ++S Sbjct: 1 MATISSTGIGSGLDVNSIVSQLVALEKTPLKTLALKATNTQNQISAFGEIQSQFAALTDV 60 Query: 61 NTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +S A + A + +SS +A + T G A A +++ V LA++Q+ ++ T Sbjct: 61 ASRISVASTWGARNASSSNTSAATITATGTANATSFSLDVDQLARSQSGSSAAVAPGTMP 120 Query: 120 AIATSDSKLTI-------QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T +L G + + + A + ++S I IN A AGV A++ N G Sbjct: 121 GAGTLTLQLGTWTAGGAAFTPGAAASVNVTVLATD-TISDIASKINGANAGVVATVFNDG 179 Query: 173 NGEYRLSVTSNDTGLDNAMTL------SVSGDDALQSFMGYDASASSNGMEV-------- 218 E RL + S TG + + + D+A S + +D + + Sbjct: 180 TNE-RLLLQSKTTGAAAGFRMTVADADTTNNDNAGLSRLSFDPATVDPLTGLASGMATAG 238 Query: 219 --SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT----------GNQTLTITQ 266 AQ+A+ +N +A+ +++NT++D + +T+ L TT T+ I++ Sbjct: 239 IPVQYAQDAKARINGLAVTSATNTLTDNIPGVTIKLVATTTTGYGLPGEVKSPLTMAISE 298 Query: 267 DTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK 326 D + A + D+V AYN L + + LTKY D+ + + G GDS++ +Q L+ Sbjct: 299 DVTPAVKNVSDFVTAYNKLNKSLTDLTKY-------DAATKTAGLFQGDSSVVGLQNILR 351 Query: 327 SMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK---K 383 +ML + +S + L+ +G+ DG L ++ KL+AA + + + L D K Sbjct: 352 NMLGSASLGASSQRLSDVGLE-RQLDGSLVINTAKLSAA-ANNGTTLQQLFTNDNKDPLT 409 Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 G S+ G +K + + K L+ TK+ +DR R ++Q++ L Sbjct: 410 NGFALKFRDLGRGVASSGGSVKNKAEALQKNLDNNTKEQTKVNDRAALFETRLRKQYSAL 469 Query: 444 DVLMTSLNSTSSYLTQQFENNSNS 467 D M LN+ ++Y+TQQ + S Sbjct: 470 DAQMAQLNALNAYVTQQVATWNKS 493 >UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 Tax=Gallionellaceae RepID=C5UZY6_9PROT Length = 477 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 143/477 (29%), Positives = 247/477 (51%), Gaps = 42/477 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D+++I+ SL A ++ + ++ QQ+S+ AK+S YGT++S + +FQTA AL + S Sbjct: 14 IDVNTIVSSLMAVERLPVNRLNTQQTSYQAKISTYGTMQSQMASFQTAAAALGSSSSSSL 73 Query: 73 ---TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 +++S T +A+ + A+AG Y ++VT LAQ+Q L + T + + + Sbjct: 74 LAFKTSSSDTGVLTASASSTAVAGTYALNVTSLAQSQNLVSAGQASSTTAISDGTSTTIN 133 Query: 130 IQQGG--------------------DKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 G +I I ++N++L GI DAIN A G++A+I+ Sbjct: 134 FDFGTLSGGTLTGGVYTSPATFTSNGTATQSITIDSSNNTLQGISDAINAANIGMTATIV 193 Query: 170 NVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA---SSNGMEVSVAAQNA 225 N G+ YRL++TS TG+ N++ +S SG D + + ++ M +VAAQN+ Sbjct: 194 NDGSSSPYRLTLTSTATGISNSVKISTSGGDGTLDTLLANDPTGLPAAQHMNQTVAAQNS 253 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 TVN +AI N+SNT+++A++ +TLNLN ++ TLTI +DT+ TA+ ++V+AYNS+ Sbjct: 254 NFTVNGIAITNTSNTVTNAMQGVTLNLNTISAAPVTLTIARDTTAVSTAVSNFVSAYNSM 313 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 + + Y S L GD TLR +QTQ++ + + V+ + + G Sbjct: 314 YSMLQTASAY-----------KSGSPLAGDPTLRDLQTQMRGIAAGAVTGGTLSAIGDAG 362 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 I+ + G ++LD+ KL+ AL + S V L TG T+ + + L+ G Sbjct: 363 ISFTAA-GVMQLDSAKLSTALSNNYSAVANLF---NSSTGFATSFENMAKNTLAFDGAFA 418 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 T +++ + + RY+ Q++ L+V++ + TSSYLTQQ Sbjct: 419 NRTASLNQAVKSNNDRIGVMEANLANIEKRYRAQYSSLNVMLAEMGKTSSYLTQQLS 475 >UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXZ9_COMTE Length = 470 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 125/481 (25%), Positives = 227/481 (47%), Gaps = 30/481 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 2 GISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQVD 61 Query: 63 ALSKADLFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+K + + T+S++T + T +A+ Y + V+ +A QT+ + + T A Sbjct: 62 KLAKPATWLGNTLTSSNSTQVTGTATSSAVQATYDVEVSQMAAGQTIGSGLVTNSTLGAG 121 Query: 122 ATSDSKLTI--------QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 + S T + G + I+A ++SL+ I IN AK VSA+++ Sbjct: 122 KLTISMGTFGTTGLTPNTKDGKDVSFEVTITAEDNSLAKIAAKINAAKGDVSATVLKDHT 181 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 GE RL + S TG+++A ++ G Q + + + M SV A++ +N + Sbjct: 182 GE-RLVLQSKTTGVNSAFSVKAEGAGLQQ----FAYNGTDGSMTRSVDAKDTLAKINGID 236 Query: 234 IENSSNTISDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + + +N + +TL + + T +TI DT+ A+TA+K+ V +YN+L + Sbjct: 237 MASHTNVFEEVAAGVTLTVAQKSAENTAPVRITIANDTATAKTALKNLVESYNALSSALA 296 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTD 349 ++T Y + + + G L GDST +Q+ ++ +LS + +L+Q+GI Sbjct: 297 TMTAY-------NKDTKAAGTLQGDSTAVNLQSAMRRLLSGHGGEGGEFTSLSQMGIAFQ 349 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLSTTGIIKA 406 DG L++D KL ALK D + D + G + + L+T G Sbjct: 350 -KDGTLKIDDTKLDKALK-DPESMSKFFTADVADASQDGFAVRLKDFTSGMLATGGTFST 407 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + L + T D S R+ A AR + Q+++LD M SL + +Y+ QQ + Sbjct: 408 KDETLKNALKRNTADQERQSARVTAYEARLRAQYSRLDTQMASLKALDTYVAQQVTTWNK 467 Query: 467 S 467 S Sbjct: 468 S 468 >UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Bacillus pumilus RepID=A8FHX1_BACP2 Length = 504 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 110/506 (21%), Positives = 200/506 (39%), Gaps = 56/506 (11%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 G + D+ I+ L ++A L ++ Q+ + + +Y + S + L Sbjct: 4 RITGFSNVFDIDEIVSKLMKTEQAPLDKMTRQKQTLEWQRDSYREVTSKVKELDDLIYKL 63 Query: 65 --SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + + A TSS + + T G+ A +I+VT LA A + T T A Sbjct: 64 ELGRPSTYGAKKVTSSNES-AVTATGSTNAASGSINVTQLATASVFKSSGTSGFTP---A 119 Query: 123 TSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSAS---IINVGNGEYRL 178 + P T+ I+ A++ ++ I +NN++ GV+A I + N + Sbjct: 120 NGTFTFEVTTPDSTKPKTVTINTADTDTIDDIVKKLNNSQLGVTAYKGQIFDGSNYVDTV 179 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 ++TS TG ++ + + + +G+ N + + Q AQ +N + +EN++ Sbjct: 180 ALTSRTTGEGVSIKATDGNSASFFTQLGFQVDGD-NKLVATTQGQKAQYEINGLKMENNN 238 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS-------- 290 NT A IT L T +L ++ D IK +V+ YN L++ + Sbjct: 239 NTFEQA--GITYELKGTTDKPVSLNVSTDVDTIFDKIKQFVDKYNELVEQVNGKVNEKRN 296 Query: 291 ---------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-- 339 + + ++ +G L DS LR ++++S +++S Sbjct: 297 RDYHPLTAEEKKAMSDKEVELWETTAKSGLLRSDSILRGGASKIRSDFYAEITTSDANKI 356 Query: 340 TLAQIGITTD---PSDGKLELDADKLTAALKKDASGVGALIVG-----DGKKTGITTTIG 391 + QIGITT GKLE+D +KL A++ D V + + D K Sbjct: 357 HITQIGITTSNKYKDGGKLEIDEEKLRKAIEADPQNVSQMFISGKLNVDSKDKDKAQQQY 416 Query: 392 SNLTSWLSTTGIIKAATDGVS----------------KTLNKLTKDYNAASDRIDAQVAR 435 + + A T + K L+ LTK + DR+ R Sbjct: 417 NEQGIIYRVQNSLTAFTKSIQKKAGSTTMQLKEYVLGKDLDSLTKRMDTFQDRLKMVETR 476 Query: 436 YKEQFTQLDVLMTSLNSTSSYLTQQF 461 Y ++F+ +D + LN+ S YL+Q Sbjct: 477 YYKKFSAMDSAIQKLNNQSGYLSQLL 502 >UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWZ3_SODGM Length = 486 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 228/490 (46%), Gaps = 42/490 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT----LTPISNQQSSFTAKLSAYGTLKSALTT 56 M IS G+ DSL Q L P +Q + +K+SA+G ++S+L T Sbjct: 1 MGGISVTGIS---------DSLMEMQAKKNTLLLQPYQLRQKNIESKISAWGKIRSSLQT 51 Query: 57 FQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD- 115 + AL ++ S AFSA+ + A+AG + I V+ LA TL+ + Sbjct: 52 LLEKSNALKNDAFYAMK--MSENKAFSASASSGAMAGTHNIRVSQLAHNHTLSLTMEKGI 109 Query: 116 DTKTAIATSDSKLTIQQGGDKDPIT---IDISAANSSLSGIRDAINNAKAGVSASIIN-V 171 DT + + L I Q G+ I I ++ +SL+GI +IN AG+ A + + Sbjct: 110 DTPLGNSAATRNLKISQKGENGQIKETVISLAQEETSLAGIAKSINGKNAGIRAEVKSVD 169 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY-----------DASASSNGMEVSV 220 G RL + + D+G M LSV GD L + M Y D+ S ++ + Sbjct: 170 NEGTQRLILRAQDSGSAGEMALSVEGDTTLAAIMNYTTPPEEPGDSTDSGEVSEKIKQDL 229 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDW 278 A +A + V+ SSNTI+D L +TL L + +++ LT++ D S Q A++++ Sbjct: 230 PATDAIIWVDGNKYTRSSNTINDILTGVTLTLKQTSKDDESEALTLSPDESAVQEAVEEF 289 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQS------SSNGALLGDSTLRTIQTQLKSMLSNT 332 V A+N I SSL+K+T + ++NG L G+S L +Q L+ + Sbjct: 290 VTAFNDYITQSSSLSKFTTANYSNLKTDTVALPDATNGPLAGESLLTDLQALLRRDAGSN 349 Query: 333 VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 + ++A +GI D GKLELD+ KL + + V L +G +K G+ + Sbjct: 350 YGNDDVTSIADLGIKVDAKTGKLELDSTKLKNKIHTNPEEVQRLFLGTEEKPGLAGVMSD 409 Query: 393 NLTSWLSTTG---IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 ++ ++ G IIK T+ + K + K I+A++ +++Q+ Q++V +T Sbjct: 410 HIKGYVGRDGKGNIIKDETEKLEKDKKEAKKQLERTEATIEARMRAFQKQYQQMEVAITK 469 Query: 450 LNSTSSYLTQ 459 L S L+ Sbjct: 470 LQSLQGSLSA 479 >UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCR5_LARHH Length = 423 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 207/460 (45%), Gaps = 40/460 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS GVGSGLDL SI++ L A +K L + Q+ ++S G +K+AL+ + + Sbjct: 2 GISSAGVGSGLDLESIINGLMAIEKRPLQKLEQQKKDLDTQVSDLGKIKNALSNLKEKSD 61 Query: 63 ALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 A++K+D F+ +SS T G+++AG Y ISV+++AQ++ + + Sbjct: 62 AITKSDFFNTIKASSSDDTIGRVTVNGSSVAGTYNISVSNIAQSRVDSLDVSVFSQD--- 118 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 A L + IT+ ++ S+ + IN ++ + G ++ T Sbjct: 119 ADGKLLLPEEITVAGTKITLGVAPVAMSVEDLVGKINAETGSKLSASLVKSAGGDKIVFT 178 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 + +G + D +G ++ S Q+A +T+N V I +++N I Sbjct: 179 AKHSGAAPGYS-----DADFNFGVGVT-------VQNSQLGQDAVVTINGVEIRSATNKI 226 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 DA+ I+L+++ G ++++ QD ++D+VNAYN ++ + ++ Sbjct: 227 EDAIPGISLSISK--PGIFSVSVEQDNDAISKGVEDYVNAYNEVVGLTAQMS-------- 276 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADK 361 G+ GD +R+I+ L + ++ LA +G+ +DGKL+ K Sbjct: 277 -------TGSFKGDGLMRSIKNDLYLTMYQPSGATGLAPLASLGVEI-GTDGKLKFTKSK 328 Query: 362 LTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKD 421 A K D V +V ++ + S + S LS G++ + + + ++ Sbjct: 329 FEKAFKDDPDIVKQNLVA------VSKGMKSTVDSMLSGDGLVSGRQEVLDGRIRNNSRQ 382 Query: 422 YNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + R++ A ++Q+T LDV + + + S L Sbjct: 383 QDSMNTRLEKTEAALRKQYTALDVALAKMQQSLSRLQSML 422 >UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 Tax=Comamonadaceae RepID=A1WR42_VEREI Length = 482 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 34/485 (7%) Query: 1 MASISSLGVGS-GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+ISS G+GS GLD+ +I+ L A ++ L + Q ++ K+SA+G LKS + T Sbjct: 1 MATISSPGIGSSGLDVKNIISQLVALERKPLDALKQQATTVNTKISAFGQLKSLVATLDD 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ +++ ST +S + SAT G + ++ + V LA+AQ + T Sbjct: 61 STRALASVTGWNSVSTASSDSKYVSATAPGGTLPTRFDVEVQSLAKAQATASGTLL-PVG 119 Query: 119 TAIATSDSKLTIQQ---------GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 A+ +L + Q P+ I ISA + L + IN A A VSA+++ Sbjct: 120 AALRAGTLRLELGQWSVAPHSFIPASGQPVDIRISAGDK-LVDVASKINGAGAAVSAAVL 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYD---------ASASSNGMEVSV 220 + +GE RL + S +TG LSV A +S +++ V+ Sbjct: 179 SDPSGE-RLLLRSQNTGQAAGFRLSVLPQGAASGGADGAAADTAALDLSSLATDSSTVTQ 237 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 AA +AQ TVN +A+ ++SNT + + + VT +++++D S I D+V Sbjct: 238 AAADAQATVNGIAVTSASNTFASTVSGVGFQALQVTQAPVEISVSKDDSATVARIGDFVK 297 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN-TVSSSSYK 339 AYN++ D TKY D+++ + G L GD+T +Q L +L + + S +++ Sbjct: 298 AYNAINDLLQDATKY-------DAKTRTAGLLQGDATALALQNSLLRVLRSVSTSGGAFQ 350 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI--VGDGKKTGITTTIGSNLTSW 397 LA +GI T G L +D +L AL + V L+ G G GI + + ++ Sbjct: 351 RLADVGI-TQQLGGGLSVDTGRLNRALAERPGDVKNLLSSTGGGSANGIAVQMKALTSAL 409 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 LS TG ++ D + ++L + ++D + DA R +++ LD ++SLN ++Y+ Sbjct: 410 LSGTGFFQSKYDTLQQSLARNSRDQAQVNAAADAFEQRITQRYNALDTQLSSLNGLNAYI 469 Query: 458 TQQFE 462 +QQ Sbjct: 470 SQQVA 474 >UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LW28_PHOPR Length = 514 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 119/525 (22%), Positives = 222/525 (42%), Gaps = 83/525 (15%) Query: 7 LGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G+GSG+D S++ ++ A++A ++ Q+ A+ +A ++ L +F+ L+ Sbjct: 2 TGLGSGIDYESMIAAIVGAERAPKENQLARQEGMNHAEKNALQEIQFTLNSFRDKVEDLN 61 Query: 66 KADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT------------LTTRT 112 + + S+ SA+ NA+ G+Y+ VT LAQ Q Sbjct: 62 SSRELQKLKAELSNDDVLSASVDSNAVPGEYSFEVTQLAQTQRDQLFKTSEGSTFSKGTI 121 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPI--------------------------------- 139 + IAT L +GG K Sbjct: 122 SFGAVSIDIATVKGDLISAEGGKKTAHHDQVYQDIADKHGLDVVADAAAIKDILETSTNP 181 Query: 140 -------------------TID-ISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYR 177 TID +++ ++ ++ AIN+ A GV A+++ G+G Sbjct: 182 DFDQARLDSYTSQQQGYQNTIDRLTSDGVTVEELQSAINSDPANDGVKATLVRSGDG-IS 240 Query: 178 LSVTSNDTGLDNAM-TLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 + + DTG+ NA+ ++V+ A D + NG + A++A + ++ + + Sbjct: 241 MVLNGKDTGVTNAIGAITVAIAPADIKGNTLDLALPVNGQKSLQTAEDATVQFGSMTLTS 300 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 ++N + + ++ ITLN+ + G + + +D + + IK +V YN +I+T ++ TK Sbjct: 301 ATNKMENVIDGITLNIKEK--GTVNVKVERDEASVNSTIKSFVADYNKIIETVNTYTK-- 356 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 S AL GDS R++ ++L+ ++ SS+Y TL+Q+GITT G LE Sbjct: 357 -------SSEDKAAALSGDSATRSMVSRLRGVIGAEYGSSTYNTLSQLGITT-TRQGTLE 408 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 +D KL AL+ D V L +GDG +TG+ + L + G D + Sbjct: 409 IDQKKLDKALEDDFDAVSKLFIGDGVQTGMMDKMMVVLDDYHKNGGTYDRRIDQLEYNNK 468 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ +D R++A+ + + ++D + +N T S L Sbjct: 469 QIAEDREKLDSRMEAKTLSLRAYYARMDSQIARMNQTQSMLVSML 513 >UniRef50_Q9K6W0 Flagellar hook-associated protein 2 n=1 Tax=Bacillus halodurans RepID=FLID_BACHD Length = 532 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 107/536 (19%), Positives = 196/536 (36%), Gaps = 84/536 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D S++ L ++ L + ++ + + AY + L A Sbjct: 1 MRIGGIASGIDTESMIKQLMQVERIPLNKFTQRKITLEWQRDAYREVNLLLKKLDDAAAN 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 + + ++++ AF+A G Y + V +A + + T I+T Sbjct: 61 IRLRSSLNTKEASTTSKAFTAQPNAQVRNGSYQLKVNQIATQSRNISSEAISNGSTKIST 120 Query: 124 S-------------------DSKLTIQQGGDK-----DPITIDISAANSSLSGIRDAINN 159 + TI TID S SL + IN+ Sbjct: 121 TRALNEQNVYADGLNIEDYHGQTFTITTYNSSGAAVEKSFTIDTS---KSLDSLFKDINS 177 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 A GV S + + ++ + +TG NA S G+ Sbjct: 178 AGLGVRMSYNSTYD---KVIIERTETGAFNAADGSNDYQIVFGGDTGFLNDVLKLNQANE 234 Query: 220 VAAQNAQLTVNNVAIENSSNTISD------ALENITLNLNDVTTGNQTLTITQDTSKAQT 273 V+ NA++ + + + +SD + IT +L T G +TL ++ +T A Sbjct: 235 VSGTNAEVEFIDPIMSSEPIVVSDSRTNRVTVGGITFSLTGTTEGFETLNVSSNTDAAFE 294 Query: 274 AIKDWVNAYNSLIDTFSSL-----------------TKYTAVDAGADSQSSSNGALLGDS 316 + ++V+ YN+ I SL + + +A + + +G L DS Sbjct: 295 KVMEFVDTYNATITELRSLLSEPRYRDYPPLTEEQRRELSEREAELWDEKAKSGLLRNDS 354 Query: 317 TLRTIQTQLKSMLSNTV-SSSSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASG 372 L ++ Q+++ L V ++ + ++ QIGITT G LE+D DKL AAL+ D Sbjct: 355 MLNSLLAQMRADLYAPVQTNGQFSSITQIGITTSSDYRLGGFLEVDEDKLRAALEADPDS 414 Query: 373 VGALIVGDGKKT----GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKL---------- 418 V L+ G + + + S TG++ +S T+N + Sbjct: 415 VHQLLNGTANSSLTSIPVKDRTSQQRSEIYSQTGLVGRIRSSLSSTMNDIVARAGNERRT 474 Query: 419 -------------TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 K + R+ RY QF++++ +M N+ + L Q F Sbjct: 475 EQQFTIGRQILDVDKRIDHFQQRLIQIENRYWAQFSRMEQMMNQANAQYASLQQFF 530 >UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A8GYK4_SHEPA Length = 472 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 106/488 (21%), Positives = 217/488 (44%), Gaps = 60/488 (12%) Query: 11 SGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 SG+ ++ + L A++A I + + + A+L AY L+ +L + + A+ D Sbjct: 3 SGMGGATFAEQLIVAERAGKDQIFKSNMTKYEAQLDAYKILERSLDSMSSKLEAI-DGDA 61 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 F + +++ S S + A G Y + + LAQA +T +D+ + + + Sbjct: 62 FESKTSSVSDDNASISVESGAPTGDYDLHIEQLAQAHQVTKSFASEDS---LLPTTGVIN 118 Query: 130 IQQGGD-KDPITIDIS----AANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTS 182 IQ G D D I++D+S +++ + IN+ GV AS++ G G+ L ++S Sbjct: 119 IQLGSDPSDSISLDMSKLNAGGTATVKDLTGMINSHSGNPGVQASLVRTG-GQVELMLSS 177 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 +TG N +++++ D A GM AAQ+A++ +N + I +SSN + Sbjct: 178 KETGAANNISVTMDPMDG--------TGAKDWGMTERRAAQDAKVNLNGIDIVSSSNNLV 229 Query: 243 DALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + ++ +++ LN + + I DT ++ AI+D+V+ +N L+D + LT+ +A Sbjct: 230 NVIDGVSIELNKAHKPGESSNIKIESDTDASEQAIEDFVDIFNDLMDEINKLTRSMGSEA 289 Query: 301 GADSQSSSN-------------------------------GALLGDSTLRTIQTQLKSML 329 + + G L GDS++R +Q ++ + Sbjct: 290 LDELNQENADKDDNSDEDKEDEDKEDDEDDSNSSITEDQLGVLKGDSSIRMLQQNMRDAI 349 Query: 330 SNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 + + L+ IG+ DGKL++D++KL+ ALK + + V + G Sbjct: 350 FDAAPNG--MRLSDIGVEF-GRDGKLDVDSEKLSKALKDNPNAVQDMFTDTGS---YVDK 403 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + + + G + D + + ++ + +++ + Y QFT ++ ++ Sbjct: 404 LDKIIEPFTQFQGSMDLKKDNLEMQIERVETSMDNHDRQMEQRYQIYLAQFTAMEATISQ 463 Query: 450 LNSTSSYL 457 L S+S+ Sbjct: 464 LQSSSALF 471 >UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 Tax=Stenotrophomonas RepID=B4SIK7_STRM5 Length = 472 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 143/491 (29%), Positives = 234/491 (47%), Gaps = 44/491 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA G+GSGL++S I++ L AA + ++ QQS +LS+ GT+ SA +T Sbjct: 1 MADFGYGGIGSGLNISDIVNKLVAADRKPADNALNLQQSKTKMQLSSVGTVTSAFDKLKT 60 Query: 60 ANTALSKADLFSATSTTSS--------TTAFSA--------TTAGNAIAGKYTISVTHLA 103 A TAL F + T++ +A T+ A G + I V +LA Sbjct: 61 ALTALKATTAFDTRTVTATGKAGPNNADDVLTASVALYDLGTSKAAAANGTHKIDVKNLA 120 Query: 104 QAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--K 161 A L T+ T T LT+ G + I++ A + +L+ +R+ I+ A K Sbjct: 121 SAHKLIADTSVPKTDT-FGAGTLTLTVGVGDKAKTMNIEVEAGD-TLTTVRNKIDAAGRK 178 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GV A++I+ G+ +Y LS+ TG +A+ L G D + ++ + Sbjct: 179 EGVQATLISSGDNQY-LSIAQEKTGAASAIKLEYGGSDPKLGAL-------VGSLKENSP 230 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 A +A LT++ V + ++SNT++DA+ +TLNL G T+ I+ DT+ A ++++V A Sbjct: 231 ATDALLTIDGVEVVSASNTVTDAVPGLTLNLK--VKGLSTVVISTDTTAATKVMQEFVTA 288 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+ I ++ TKY D+++ AL GD+ +R QL+S +S + + L Sbjct: 289 YNAAIAAINTETKY-------DAKTKEASALTGDAQMRGALAQLRSTMSGVLLDLAGDKL 341 Query: 342 AQ--IGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDGKKTG-ITTTIGSNLT 395 +G+ T +DG L LD K AAL + I GD G + T + ++ Sbjct: 342 DAKALGLQTRGYPNADGTLVLDTTKFAAALAAQPEKIRQAITGDTGGAGRLYTMVDGYVS 401 Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + + G A T G++ TL+ + K R+ ARYK+QF LD LM L +S+ Sbjct: 402 TTVGKEGAFVARTKGLNSTLDNIDKRRKDLDARMVGVEARYKKQFVALDSLMGKLQQSSN 461 Query: 456 YLTQQFENNSN 466 L+QQ + Sbjct: 462 TLSQQLSQLNR 472 >UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSH1_9PROT Length = 469 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 147/477 (30%), Positives = 245/477 (51%), Gaps = 44/477 (9%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN---------T 62 G+D++SI+ L ++A LT ++ +++ F AK+SA G+L+ A++ QTA T Sbjct: 7 GIDVNSIVTQLMTVEQAPLTALAKKEAGFQAKISALGSLQGAVSALQTAAGNLVPAIGTT 66 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 AL K +F + T SA+TA +A+AG Y++ VT LA+ ++ T T + Sbjct: 67 ALQKFSVF--KAALGDATIASASTAASAVAGTYSLEVTRLAKQHSIMTATGAATPFSGTG 124 Query: 123 TS---DSKLTIQQ----GGDKDPITIDISAAN-SSLSGIRDAINNAKAGVSASIINVGNG 174 ++ KLTI G + D++ A+ ++ IRD+IN+A GVSA +IN G Sbjct: 125 STLPTGGKLTISLDSVPPGASPFKSTDVTIADGATPEAIRDSINSASTGVSAVVIN-GTA 183 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 +L +TS+ G + + L SG +L ++ S AAQ + +N +AI Sbjct: 184 GKQLVLTSDTAGSNQFIKL--SGIASLAYDPNAVPVPLTDPFVQSQAAQGSAFKLNGIAI 241 Query: 235 ENSSNTISDALENITLNLND-----VTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 E ++NT++ AL+ +TL L VT+ + TLTI++DTS + V A N T Sbjct: 242 EATTNTVTTALDGVTLTLLKGPEAPVTSLSTTLTISKDTSSLTAGVNALVKALNDFNSTA 301 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT---VSSSSYKTLAQIGI 346 + L Y D+ + G L GD+TLR+ Q +++ ++ + + L+ IG+ Sbjct: 302 NGLGSY-------DAATRKAGTLNGDNTLRSAQNAIRTAFGKVPTDLAGAKLQRLSDIGV 354 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 + DGK+ +D KL A+ +D GV L+ G T + + + T G+I A Sbjct: 355 SLQ-KDGKVTVDTAKLGKAISEDLPGVAKLVAAYGSATKLAA------DTLVGTGGLIAA 407 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++G+S ++ L K +A S R+ ARY+ QF+ LD L+ + +TS++L QQ N Sbjct: 408 RSEGLSASIQNLGKQSDAISSRLTQIEARYRRQFSSLDTLIAGMTTTSTFLEQQLAN 464 >UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GNZ5_SPHAL Length = 456 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 114/470 (24%), Positives = 203/470 (43%), Gaps = 40/470 (8%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +SLG GSG+D+ ++D L+ A + + ++ + ++SA ++ L F + + Sbjct: 7 NSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQ 66 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKY--TISVTHLAQAQTLTTRTTRDDTKTAI 121 + +T T S + AT+ A + T+ V LA+AQT + D T Sbjct: 67 MIGDGTLRSTPTVSDDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRTA--- 123 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 A +T+ GG ITID + N++L G+ DAIN + AGV+ASII G +RL + Sbjct: 124 AIGTGTMTLTVGGVAKTITIDGT--NNNLDGLADAINASAAGVTASIIAD-EGGHRLILK 180 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 TG N TL G + A+ GM + +A +A+ T++ +A ++N + Sbjct: 181 G-PTGEANGFTLVADAGADP----GLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIV 235 Query: 242 SDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 D + ++L L G + + + + D+V YN L + ++ + Sbjct: 236 DDVVPGMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGAT- 294 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDA 359 ++LR ++ L ++ +SS S L+ IGI+ +G L +D Sbjct: 295 ---------------TSLRELERDLGGLIHQVISSHGSINQLSDIGISV-TKEGLLSVDN 338 Query: 360 DKLTAALKKDASGVGALIV-------GDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 +L AL+ DA V AL + GI + + + G I + + Sbjct: 339 ARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLE 398 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 L + +R DA R ++Q+ L+ + + +T +YL QQ + Sbjct: 399 TRQRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIK 448 >UniRef50_D2LUB9 Flagellar hook-associated 2 domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUB9_BACS4 Length = 547 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 98/546 (17%), Positives = 195/546 (35%), Gaps = 87/546 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA--N 61 + G+ SG+D ++ L A++ L + ++++ + AY + +T + + Sbjct: 1 MRIGGLASGMDTQQMITDLMKAERMPLDKLIQRRTTLEWQRDAYRDINLQITNLRDSFRA 60 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 T L F S SS + AT NA ++V LA A T ++ T Sbjct: 61 TGLGLQATFLQKSVNSSNQSVVRATATANAPNTSVQMNVQRLATASTYVSQNTLSAEVQD 120 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSS------------LSGIRDAINNAKAGVS 165 + D LT + G +T+ + S LS + +N++ G + Sbjct: 121 LELKDWNVPGLTFENGVANFEMTVKDPSTGESRVASFQLKETDKLSNVLTTLNSSSLGFN 180 Query: 166 ASII-NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY----------------- 207 A + N ++ + +TG ++ + G++ + + Sbjct: 181 AYMDQNAAADSPQIVLNMRNTGANSDINFDQVGEEGDSTKLNNGLALFQSLGFTTVSPTE 240 Query: 208 -DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN---QTLT 263 ++++ +E NA+ T+N E ++N + + + +L V++ +T Sbjct: 241 EGETSTTLSLEGGRPGTNARFTLNGHTTERTTNQFT--INGVNYSLTGVSSSPDEITMIT 298 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFS------------SLT-----KYTAVDAGADSQS 306 +T K I +V YN L+D + LT + T + + Sbjct: 299 TQTNTDKIFEDIMKFVEQYNELVDKINGSVNEPRHRDFPPLTDEQRREMTEYEVEMWEEK 358 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDPS---DGKLELD--- 358 + +G L GDS L + +Q++S + + V + L+QIG+ + P+ GK+ LD Sbjct: 359 AKSGLLRGDSALNSALSQMRSAMFSVVGVQGDLIRDLSQIGLVSSPNYMDGGKIVLDHTA 418 Query: 359 -----------ADKLTAALKKDASGVGALIVGDG---KKTGITTTIGSNLTSWLSTTGII 404 D+L ++ + +GDG GI + L + Sbjct: 419 REMPNGERMTGEDRLRYYIENHGEELYGFFMGDGPEASDKGILRKLRPALEGAMDRITSR 478 Query: 405 KAATD------GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + + L + R+ RY QFT ++ M +NS + + Sbjct: 479 AGREGRTNHQFTLGRELINVEDRITNFERRLQQTEQRYWNQFTAMETAMAQMNSQAEQMW 538 Query: 459 QQFENN 464 Sbjct: 539 AMVSGM 544 >UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYF4_HALNC Length = 468 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 141/468 (30%), Positives = 227/468 (48%), Gaps = 27/468 (5%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + IS G+GSGLD+ I+ L A+ A ++N+Q++F LSA G LKS+L++ QTA Sbjct: 14 SGISFSGLGSGLDIQGIVTQLVNAEGAPQQQILTNRQTAFNTTLSALGQLKSSLSSIQTA 73 Query: 61 NTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 A D F + T+T S+++ SA+ G Y + V LA AQ + + T T Sbjct: 74 VDAFQNLDTFRTRTATVSNSSILSASAIPGTALGTYQVEVDQLATAQKMASAGYASATST 133 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGE-- 175 L G +++ AA +L+ IRD IN A GV ASIINV NG Sbjct: 134 ---VGSGTLNFTVGSGSFSVSV---AATDTLTNIRDNINAATGNTGVQASIINVDNGSGG 187 Query: 176 --YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +L +T+ +TG N T++ D + ++ +SN + AAQ++ + ++ + Sbjct: 188 TVSKLVMTALNTGTSNGFTVTAVDSDGNNTDAVGLSALASNNLTQISAAQDSIIKIDGMQ 247 Query: 234 IENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + ++SN++S A+ +TLNL G +T+ D S TA++ V YN T +SL Sbjct: 248 VTSASNSVSTAVTGLTLNLTQAQVGTSVAVTVGTDNSPITTALQTLVTNYNKYQSTNASL 307 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDP 350 T Y D ++ GALLGD T + L+S++ ++ S + LA IGI D Sbjct: 308 TSY-------DQTANQAGALLGDVTATGVNNALRSLMGQNYTTGSTTIQNLADIGIQVD- 359 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 +G + LD KL AL D + V L+ G++ + S L +L G+ + T Sbjct: 360 KNGVMSLDTTKLNQALAADPNVVKTLLT--DPTNGVSAKVDSVLNPYLQYNGVFDSRTAS 417 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 ++ L +T R++ QFT +D + +N + S+L+ Sbjct: 418 INSQLKTITTQQADLQARLNQYQTSLMAQFTAMDSYVAQMNQSMSFLS 465 >UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLI5_EXIS2 Length = 520 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 122/530 (23%), Positives = 207/530 (39%), Gaps = 81/530 (15%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I G+ SG+D +++ L ++A + +S ++ + T + AY + L +TA Sbjct: 1 MAGIRLSGLASGIDTETMIKQLMQVERAPVDRLSQKKQTLTWQRDAYREMNRGLLDLRTA 60 Query: 61 NTA-LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDDTK 118 + L + + T+T+S + T + A AG TI + LA A ++T TT+ + Sbjct: 61 ASDMLLSKNYIAKTATSSDASKVVVTASPGATAGSVTIDEIGQLASAASVTMTTTKGSSS 120 Query: 119 TAIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 + + G G TI + A LS + AIN + Sbjct: 121 DTTLAASGMFNVTNGKVNIQINSFAADGKAISETISLDATQK-LSDLTSAINGKTSLGMN 179 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 ++ N G +L +T +TG N ++ DA ++ G + +NA+ Sbjct: 180 AVYNDITG--KLVLTKTNTGKLNPNGADITVIDANLGTEKVNSQIDGVGQD----GKNAK 233 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T+ +E +NT + +T+ LN +T T+ DT +IK +V+ YN LI Sbjct: 234 YTIGGQELEQRTNTFTQ--NGLTITLNGTSTTATTINTKLDTQANFDSIKKFVDKYNDLI 291 Query: 287 DTFS------------SLTKYTAVDAGADS-----QSSSNGALLGDSTLRTIQTQLKSML 329 D + LT + D + + +GAL DS LR +S + Sbjct: 292 DKMNKKVREEKYRDFQPLTDTQRKELSEDEVKKWEEKAMSGALKNDSFLREGMDAFRSAI 351 Query: 330 SNTVSSS----------SYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGAL 376 S+ + + ++QIGIT+ GKL++D KL L++ GV L Sbjct: 352 SSKIDTGYSYTVDSKSVGLNYMSQIGITSTSDFRDGGKLKIDEAKLKKMLEEQPEGVYKL 411 Query: 377 IVGDGKK-----------------------TGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 D + G TT+ ++ G + A T + K Sbjct: 412 FTADAPEPVKNPDGSITPNPGGLDGFVRQIQGFATTMRDKISKVAGLDGAV-ATTYRLGK 470 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS----SYLTQ 459 +L L K D++ + Y +F ++ M NS S SYL Q Sbjct: 471 SLADLDKSMVTWEDKLKTKENAYYRRFAAMEQAMNQANSQSATLASYLGQ 520 >UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG73_9GAMM Length = 479 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 143/485 (29%), Positives = 243/485 (50%), Gaps = 42/485 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+++G GSG+DL +++ L AA++ ++ +++ AK S+ G LKS ++ F+ + Sbjct: 2 GITAIGTGSGIDLETLVTDLIAAEREPREISLNLKETVANAKFSSLGNLKSNVSEFRDSL 61 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +L +SA + TS T+ F+ T NA G YTI V LA A + T + + Sbjct: 62 ASLKDITSYSARTATSGNTSLFTVTAEANANVGSYTIEVNTLANANKVATNASFTSPNST 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSS-LSGIRDAINNA--KAGVSASIINVGNGEYR 177 + + G T D++ A++ L+ +RDAINNA GV+AS+I +G Sbjct: 122 VGQGTLTIGFLAGS-----TFDVTVADTDDLTAVRDAINNATDNVGVTASLITAASGT-E 175 Query: 178 LSVTSNDTGLDNAMTLS-------VSGDDALQSFMGYDASASSNG------MEVSVAAQN 224 L +T+N TG N + +S + D S + YD S +N M+ AAQ+ Sbjct: 176 LVITANKTGAANQLNISVIDTGDTTNQDANGLSRLFYDGSDPANSINGVNQMQQIDAAQD 235 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTL-----TITQDTSKAQTAIKDWV 279 AQ+ V+ A +S+N S LE +T+ G TL ++ D + ++ ++++V Sbjct: 236 AQIYVDGFAATSSTNEFSTVLEGVTITALADDGGAATLPSANMVVSADKTLIKSGLENFV 295 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 YNSL+ + LT Y S+++G L G++ + ++TQ++ +L TV S S+ Sbjct: 296 AGYNSLVTVLNELTDYNVA-------SNTSGLLSGETVIAGMETQIRRLLGATVESADST 348 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 LA +GI+T+ DG + LD L ++ + S +G L+ GD GI T + L + Sbjct: 349 LNNLALLGISTN-RDGSIALDETALNNTIENNFSNIGTLMSGD---DGIITRMDDLLGGF 404 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 L G+ ++ L+ + R+ RY+ F +LD+L++ LNST ++L Sbjct: 405 LDRGGLFATKEATLTTQLDDVADQRLNLELRLSVIEERYRSAFGKLDILVSRLNSTGNFL 464 Query: 458 TQQFE 462 TQQ E Sbjct: 465 TQQLE 469 >UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2J7_9BACL Length = 466 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 129/484 (26%), Positives = 226/484 (46%), Gaps = 40/484 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S G+ SGLD S+++ L +K T + +++++ + + + + L T + A T Sbjct: 2 GVSLTGLASGLDTSTLITQLMNLEKVPYTNLESKKTAISNNKTIFNNINLKLKTLRDAAT 61 Query: 63 ALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR------D 115 ALS F+ +++T+S +T +AT NAI G Y++ V LA+ Q T + + Sbjct: 62 ALSDLGAFNVSSATSSDSTKLTATGGENAINGSYSVKVIQLAKQQVNATAGMQVTDANGE 121 Query: 116 DTKTAIATSDSKLTIQQGGDKDPIT---IDISAANSSLSGIRDAINNAKAGVSASIINVG 172 D + A +I+ GG + + +LS I IN V AS++ Sbjct: 122 DIEFTSAALAEAKSIKIGGQSITLNDDDFTGKTYSEALSLIASQINKQFGDVQASVVQRS 181 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 G L +++ +TG ++ S M VAAQ A L VNN+ Sbjct: 182 EGVKSLVISAKETGKTVDIS-----------------GTGSFKMWEKVAAQPAILEVNNL 224 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 ++ ++SNT+++A+ +TL L + + QDT K + + D+V AYN ++ Sbjct: 225 SVTSTSNTVANAIPGVTLQLL-AENSTVNVEVKQDTDKLASKVDDFVKAYNDVVKLIREN 283 Query: 293 TKYTAVDAGAD-SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YKTLAQIGITTDP 350 TK G+D S ++ L GDSTLR +Q++L ++++ V SS K L+ IG+ D Sbjct: 284 TKKIENTKGSDGSYTNFKTNLQGDSTLRDLQSELYDIVNSVVGSSDNLKLLSDIGLEIDK 343 Query: 351 -------SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGI 403 G+L D DK L ++ V L G + G+ T L W ST G+ Sbjct: 344 GVTSASLMTGELSFDKDKFKKKLAENPEAVAELFQG---ENGLGTLAKDRLYGWTSTNGL 400 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 I G+ ++ +T + ++R+ + +QF+QL+V +++L + S+L Q + Sbjct: 401 IAMRIQGLQSDIDFITDQMESMNERLKLKEEALNKQFSQLEVALSNLQNQQSWLAGQLNS 460 Query: 464 NSNS 467 +S Sbjct: 461 LMSS 464 >UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850952 Length = 496 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 104/505 (20%), Positives = 198/505 (39%), Gaps = 55/505 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF-QT 59 M+++ G+ SG+D SI+ SL ++ + + ++ + Y + + L F QT Sbjct: 1 MSTMRVGGLASGMDTESIVKSLMEVEQMKVDKLKQNKTYLEWQRDDYREMNTMLLNFDQT 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + + F+ + S +TA S + +IS+ LA L + R D Sbjct: 61 IFDGVFRQSTFTKKTVDVSDSTALSVKNINSTSEFTGSISIEQLATGSRLVGDSGRTDID 120 Query: 119 TAI-----------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 T ++ Q + + I SL+ + + IN+ + Sbjct: 121 PNTLLNSATSLNLSGTQTIRVATQGKPASEGVEISFDPTKESLNDVINKINSKTG--VSM 178 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 + G ++ V++++TG N +S +D+ + + + + NA+ Sbjct: 179 YFDQATG--KIGVSADETGAGN-----ISLEDSTGTLFSSLNLTAGSTNLQTTDGNNARF 231 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T N + +E SSNT+S + + L L T+G T + T DT + +V+ YN LI Sbjct: 232 TYNGLQLERSSNTVS--INGVELTLKKETSGAEVTYSSTTDTDSILKEVVKFVDEYNKLI 289 Query: 287 DTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 + K + + + + G L GD+ L + +++ + Sbjct: 290 EKMGDEVKERRSKEYKPLTDMEREGLSEDEIKKWEEQARKGTLYGDNNLSSALNKMRVDI 349 Query: 330 SNTV-SSSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDG---K 382 ++V +S +LA+ GI T GKL +D DKL A+ D + + + DG Sbjct: 350 YSSVQGNSGLASLAEFGIKTSSNYLEQGKLIIDEDKLRQAISDDPNKLYETFMADGVTDA 409 Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDG------VSKTLNKLTKDYNAASDRIDAQVARY 436 + GI + + + T + + L + + + R+ RY Sbjct: 410 EQGIARRLRDTVKDTMGAIEQKAGKTSSGNDSFTIGRNLKNVDRQIDNWEQRLIDIEDRY 469 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQF 461 QFT ++ ++ NS SSY+ QF Sbjct: 470 WRQFTAMEKMIQQSNSQSSYIMSQF 494 >UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT6_METFK Length = 668 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 139/413 (33%), Positives = 232/413 (56%), Gaps = 27/413 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS S + + D+ SI+ SL A ++ LT +S Q++S+ +K+SAY TL+S+L++FQTA Sbjct: 1 MASTSGISASTNFDIDSIVSSLMAVEQKPLTLLSQQKTSYQSKISAYATLQSSLSSFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + F+ S TS +A F+AT++G+A Y I V LAQ+ + T +T Sbjct: 61 LANLSTSSKFNVQSATSGDSAVFTATSSGSATVSNYAIKVGQLAQSHKVATSNF-SNTSA 119 Query: 120 AIATSDSKL----------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 A+ T + T DK ++ ISA+N+SL+GIRDAIN GV+A+I+ Sbjct: 120 AVGTGTITIALGTYDEATNTFTANPDKAAKSVTISASNNSLAGIRDAINAGDMGVTATIV 179 Query: 170 NVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSN---GMEVS 219 N G +G RL +TS ++G N++ +S++ D S + YD +A+S + Sbjct: 180 NDGQSGGGRLVLTSKESGEVNSIKVSIADADGDNTDSDGLSRLAYDPAAASGAGKNLVEL 239 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDW 278 A+NA+L ++ + +E++SN ++ L ITLNL + +L +T++ + + ++ + Sbjct: 240 QEARNAKLNIDGIDVESASNVVTGVLSGITLNLFKASPDTAVSLNVTKNVTAIKDSVTAF 299 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS- 337 VNA+N++ T +LTK+ D+ + NGALLGD+T R+I +Q+K L+ +V + Sbjct: 300 VNAFNAVNTTLRNLTKF--DDSTTTAADRKNGALLGDATARSISSQIKMALTKSVGGTDN 357 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTI 390 + +L+QIG+ DG L LD+ KL A++ + V L G + + T Sbjct: 358 FSSLSQIGVAIQ-RDGSLALDSSKLEKAIETNLDDVAKLFAAVGSASDVETRF 409 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 47/81 (58%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + + ++S TG++ + TDG+ ++ ++TK A R+ A ARY+ QF LD Sbjct: 585 GYAAQLNELVKGFVSDTGLLASRTDGLQDSIKRVTKQEEAIQVRLAAVEARYRAQFVALD 644 Query: 445 VLMTSLNSTSSYLTQQFENNS 465 VLMT + +T SYLTQQ S Sbjct: 645 VLMTQMQTTQSYLTQQLAAIS 665 >UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Bacillus subtilis group RepID=FLID_BACSU Length = 498 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 104/498 (20%), Positives = 211/498 (42%), Gaps = 46/498 (9%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA- 63 G+ SG+D+ I+ L ++A L ++ ++ + + +Y + S + Q + Sbjct: 4 RITGLASGMDIDDIVSKLMQTERAPLDKLTQKKQTLEWQRDSYREVNSKIKELQDYMSKN 63 Query: 64 -LSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+ + + + TSS + +AT + +A T+ V LA A T T+ Sbjct: 64 TLTYPSTYQSKTVTSSNESVLTATGSVSAPNSSSTVEVASLATAATYKANNYTGYTQ--- 120 Query: 122 ATSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKAGVSASIINVGNGEYR--- 177 + + G+ T++IS + ++ + +N++ GVSA + NG Sbjct: 121 GDYNLAFNVVAPGETTAKTVNISVTSADTIDNVISKLNSSDLGVSAFKDKIWNGTEYVET 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 ++ +S TG ++ + S S + + N + NA++T+N +E Sbjct: 181 IAFSSKATGAGGSIQAADSATADFMSGQLGFSLDADNKLTAYKEGTNAKVTINGFEMEKL 240 Query: 238 SNTISDALENITLNLNDVT--TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK- 294 +N + + +T ++ + T TG T +++ D IK++V+ YN L+D+ + K Sbjct: 241 TNNFT--VNGVTYSIKNTTAATGPVTTSVSTDVDGIYNQIKEFVDKYNELVDSLNEKLKE 298 Query: 295 ----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 + + + + +G L DS++ T Q+++ V++ Sbjct: 299 EKYRDYTPLTSEQKEAMSDKEVELWEEKAKSGLLRNDSSISTGTNQMRTDFYTQVNADGK 358 Query: 339 KT-LAQIGITTDPSD---GKLELDADKLTAALKKDASGVGALIV-----GDGKKTGITTT 389 L + GITT + G LE++ +KL A + +D GV L + GI Sbjct: 359 TYQLTEFGITTSSAYQLRGHLEINEEKLKAKIAEDPQGVANLFTSGTNDSNYSDKGIMKR 418 Query: 390 IGSNLTSWLST------TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 I + L S + + + A++ + K LN ++ + DR++ RY +F+ + Sbjct: 419 ITNTLRSTVKSIEAKAGNSTMGASSYSIGKNLNSISTEITDMQDRLNTIENRYYSKFSAM 478 Query: 444 DVLMTSLNSTSSYLTQQF 461 D + +N +SYL+Q Sbjct: 479 DSAIQKMNEQASYLSQLL 496 >UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8V2_9GAMM Length = 474 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 107/488 (21%), Positives = 211/488 (43%), Gaps = 46/488 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ +LG GSG+DL S++ L ++Q+ + + + S + +LSA G+ +S +F A Sbjct: 2 SVGALGTGSGMDLESLVSGLVSSQRDSKIAAYEQKISDLSVELSAVGSAESVAFSFHEAV 61 Query: 62 TALSKADLFSATSTT----SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT-RTTRDD 116 ++ LF++ + A + +G+A G+Y++ V +A + + Sbjct: 62 KKVNDPRLFNSRIADIEQPDTGDALAVEASGSARNGQYSLGVDQVASGSRMELLPNVFES 121 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 + +T G + I +D + LSGI G+SASII+ G G+ Sbjct: 122 PDDVLTALGGTMTFAAGNESFTINLDGGTTLAELSGIIAQA-EKNFGISASIIDTGEGDV 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDD---------------------ALQSFMGYDASASSNG 215 RL + S+ TG N + +SV+ L + S + Sbjct: 181 RLIIESDKTGDGNDLNISVNERTLVDIMGTDTRYDFASLPQKYTDLLKSTKNNLSMIPDN 240 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 + + AQN + V+ V IE +NT A++ + + + T G +I+ D+ + +I Sbjct: 241 LISTQFAQNGIINVDGVEIEGDNNTFDKAVQGLEIEALNKTEGQVAASISTDSETIKESI 300 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 K ++YN ++ TF+ LT+ G L G+S LR +++ L S L T Sbjct: 301 KTLTDSYNKMVSTFNDLTQM-------------GGTLQGNSLLRNLESSLVSTLGRTFEG 347 Query: 336 SS-YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 ++T+ +GI + G +++D+ KL A+ + G + G+ + Sbjct: 348 GGEFRTMFDLGIEVE-RSGLIKVDSYKLDNAISSGFKNFADMFTG---ERGVAKAFDELM 403 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 ++ +G+ ++ D + + + A R++ ++Q++ LD + +N++ Sbjct: 404 QPYMGASGLFRSTEDSIQSQITSNDESREAFDLRMEQYEKTLRKQYSSLDSSIAEMNASG 463 Query: 455 SYLTQQFE 462 +YL Q Sbjct: 464 AYLRSQLS 471 >UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 Length = 427 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 209/450 (46%), Gaps = 36/450 (8%) Query: 13 LDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D +S L A ++ + + Q + SA TL + L+TFQT L+KA Sbjct: 3 IDPASTAMQLVAIERKNMDALLKKQMDGIKGQQSALSTLNTKLSTFQTMLKDLNKASNLQ 62 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 A T S + T+ G A +G+Y V LAQ+ + D++TA +D ++ Sbjct: 63 AQKATMSQDGVMTVTSNGKASSGQYNFFVEQLAQSHQI---GLSLDSETAPLPADGVFSL 119 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLD 188 G I + A S++ + IN+A GV A+++ +G+ + +TS D+GL+ Sbjct: 120 TVKGKTIDIDLATLPAGSTVKDLVSHINDAKDNPGVKATLVRT-DGKVNMVLTSKDSGLE 178 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDAL 245 NA+ ++ GD + A+ +G AQ+A+L + + I ++SN I + + Sbjct: 179 NAIVVNYRGDASNS------LGAAISGKTDITKAQDAKLRMGGDNPLTITSASNKIENVV 232 Query: 246 ENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 + +TL L + I QD ++K +V++YN LID + +T Sbjct: 233 DGLTLQLTKAQKNGDAPLLVNIEQDKEAVTGSLKKFVDSYNELIDELAKMTS-------- 284 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKL 362 S + GAL DS +R++++ L + + + + +L+ +GI TD + GKL Sbjct: 285 -SDPKAPGALSSDSGVRSLKSVLSNSVRDLPNG---LSLSSLGIKTDKA-GKLSFSETDF 339 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDY 422 AL+KD +G ++GD G+ + +L + G +K G+ + ++ + Sbjct: 340 NKALEKDPELLGKALMGD---DGLLKRMSDSLDPYTKRDGALKGRKSGLEASEKRVNERM 396 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 A R+D+ RY QFT ++ ++ ++ S Sbjct: 397 EALDRRMDSAYKRYLNQFTTMNQMLQTMGS 426 >UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n=1 Tax=Desulfotalea psychrophila RepID=Q6AMN7_DESPS Length = 485 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 120/500 (24%), Positives = 214/500 (42%), Gaps = 50/500 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS G+ +GL ++ L A+ L + Q+++ L AY L + + Sbjct: 1 MGDISFGGLATGLPTEDLIAGLMKAESKPLDRLEKQKTNDATHLEAYEEYNDLLDELRES 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +A+ T S + ++ A G Y ++VT LAQ Q T ++ Sbjct: 61 VSAMHLTSDVRTTDVKLSNEDTLSASSSGAATGSYNVAVTQLAQVQKNVTAGVSSQSEAM 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVG--NGEY 176 + + + I ++L G+ +AIN+ K GV+ASIIN G Y Sbjct: 121 FSNGHLTI--------NDTKIVFDGDKTNLDGMLEAINSVADKTGVTASIINDGKETDNY 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L D D ++ G + + AQ + V+ + I++ Sbjct: 173 HLVFAGKDASTDFTISTD-------LKVKGAEGETVDFANTRTSVAQQSIAYVDGIEIQS 225 Query: 237 SSNTISDALENITLNLNDVTT-------------GNQTLTITQDTSKAQTAIKDWVNAYN 283 +SNT+ + +TLNLN+V+ + +T ++ + I+ +V+AYN Sbjct: 226 NSNTLKGVVGGLTLNLNEVSKVISPADGDTPAVYATTVVELTANSDSLKEKIEGFVSAYN 285 Query: 284 SLIDTFSSLTKYTAVD------AGADSQSSSNG---------ALLGDSTLRTIQTQLKSM 328 +D S +Y A + + +D++ + L GD TL + +L+S+ Sbjct: 286 KAMDWIVSGYEYKAENDKKIDASSSDAEKEAAAGQKSKKLSNLLRGDPTLNKAKRELQSI 345 Query: 329 LSNTVSSSS-YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 L + +SS + L++IGI T DG L ++ KL AL ++ V L GD K G+ Sbjct: 346 LGESADNSSKFNILSEIGIKTQ-RDGTLLVNKTKLDKALDENYGDVVTLFAGDASKDGLM 404 Query: 388 TTIGSNLTSWLSTTGIIKAATDG-VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVL 446 + S L S T + A G T ++ K ++++ RY+ QFT L++L Sbjct: 405 DKLNSKLLEQTSATRGVYAEKKGHYKATGKRIDKQIANQKTQLESIEKRYRAQFTALELL 464 Query: 447 MTSLNSTSSYLTQQFENNSN 466 ++ +NS SSY++Q ++++ Sbjct: 465 VSKMNSQSSYISQYLTDSTS 484 >UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17 Tax=Vibrionaceae RepID=FLIDL_VIBPA Length = 445 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 204/463 (44%), Gaps = 36/463 (7%) Query: 11 SGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA-- 67 S +D ++ + Q +++ ++LSA G ++SA+ F+TA ++ + Sbjct: 2 SSIDPATFAAQFAQIEIQPFKQRYQLQTNTYQSQLSALGKVESAMREFRTALNEMNSSTN 61 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 + +++ S F+A A++G Y I V +A + ++T D T Sbjct: 62 SIIKNSTSISQEGYFTANADAKALSGSYQIFVEQVATSHQVSTGMPADLDATTEIPKTGN 121 Query: 128 LTIQQGGDKDPITI----DISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSVT 181 L G I + +++S + AINN GV+A+++ NG+ ++ Sbjct: 122 LEFTINGKTMTIDLSTVDTDGDGVTTVSDLTKAINNNSDNPGVNATLVR-SNGQTHFMLS 180 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENS 237 S +TG+ N + +S +G + + A Q+A + + + + NS Sbjct: 181 STETGVANQINVSATGTGQAWFEDAF------TNLSQISAPQDAVIWLGAEKTGLKLTNS 234 Query: 238 SNTISDALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SNT ++ + + + T +T L I D + + +V+AYN+LI T T+ Sbjct: 235 SNTFEGVIDGVDITVTKAQTSGETAIGLGIGADDEATKEQLNKFVDAYNTLISTIDEHTQ 294 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 S+ G L D T+R+I++QL S++ L++IG+T D GK Sbjct: 295 -------IGSEDKKRGVLASDPTMRSIESQLSSLVR---GEHGGMRLSEIGVTLD-RHGK 343 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 L++D +K A K +++G+ A+ GDG + + ++G K+ + + Sbjct: 344 LKVDQEKFAEAQKNNSAGLEAMFNGDGALLDSMDAMAEPFLKF--SSGAFKSRKEALQAN 401 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 L++L+ + D RY +QFTQ++ LMT +N T S Sbjct: 402 LDRLSDKQTTLERKYDMSYKRYLKQFTQMNTLMTQMNQTMSMF 444 >UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWJ0_9BACT Length = 484 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 113/474 (23%), Positives = 199/474 (41%), Gaps = 44/474 (9%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 + GLD ++++ A L + Q+ AK + + ++ L F + L Sbjct: 31 LSQGLDTEKLVNANLEAAAIPLEQMQQHQADLDAKSAIWRQVQQKLDGFLKSAGNLHLRQ 90 Query: 69 LFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI------ 121 FSA S +AF+ T A G Y++SV+ LA+ L + D KT++ Sbjct: 91 DFSAFKSIVPPHSAFTVTPGPGASLGSYSVSVSSLARPGVLVSSGVADKDKTSVLNIPPD 150 Query: 122 -ATSDSKLTI-----QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN-- 173 A S + LT GG + ID S +L + AIN+A G+ A ++ G Sbjct: 151 GAFSHATLTFLIGDHLVGGKIRSVRIDQSTG-FTLESLAGAINDAHIGIHAMVMRTGAPG 209 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 Y LS++S G+ N + G D + A A LTVN V Sbjct: 210 APYSLSLSSTKNGM-NFRVMEQEGLDFT--------------FKTVQKASLAHLTVNGVP 254 Query: 234 IENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 +++ SN ++DA+ ++L T T +I +T +T + +V +YNSL+D Sbjct: 255 VQSESNDVADAIPGSVIHLRQTTGPTPTTASIVHNTKTIKTNVGAFVKSYNSLLDFLDKE 314 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTD 349 T+ + + G LLG ++ ++ +L ++L+ + ++TLA +GIT Sbjct: 315 TR-------VNPATGQGGPLLGAYSVVDLRNRLGTVLTRPLPEKVQGKFRTLADVGITFQ 367 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAAT 408 +G L D+ K AL + V L+ G G GI + L + + +G + Sbjct: 368 -RNGHLSFDSGKFDKALASNYDDVVHLMTGQGATPGIVAGVHDLLMEFANPASGPLAGEI 426 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++ ++ D + + +E+++ L L+ LN +Y+ QQ Sbjct: 427 SDINDQERTNVREMTRKQDELANLKDQLEEKYSGLQGLLGGLNQKQAYVQQQIA 480 >UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Filament cap protein) n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZCP1_9GAMM Length = 687 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 141/487 (28%), Positives = 232/487 (47%), Gaps = 44/487 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+S++S G+GSGLD+++I+ ++ A+K L+ I+ + + TA +SAYG L L F++ Sbjct: 1 MSSVTSTGLGSGLDINAIVGAIVGAEKDPALSKITKEDAKATAIISAYGLLNGDLDDFKS 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + L+ + FSA S +SS T+ T G A G + + AQAQTL + + Sbjct: 61 SYKDLAYSSTFSAASASSSDTSILDTKLGVGAQTGTWQFEIKQKAQAQTLVSGANSSFSS 120 Query: 119 TAIATSDSKLT------------IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 + ++ D+ I I N+SL G+R+ INN V+A Sbjct: 121 VKDPIGEGVISLRFGAYNEDGSDFSVNADRPIEKITIDGKNNSLEGLRNTINNGDYSVNA 180 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDA-----LQSFMGYDASASSNGMEVSVA 221 SIIN GN YRL +TS TG +NA+ ++V+ + + + +A+ +E + Sbjct: 181 SIINDGNN-YRLVLTSKTTGKENALEITVADANGDALPSSNALNNFTYTATQKNLEQTSL 239 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWV 279 AQ+A + +N + I SN I+ +E +TLN+N T TL I D SK + I+ +V Sbjct: 240 AQDAIIVMNGIQITRDSNEITSVIEGVTLNINGETAPGKKVTLKIDADNSKVKEQIEAFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 YN+ + LT Y +++ +NG L GDST+R I++ ++ +L+ V S Sbjct: 300 ENYNATFAKMNELTSYKG------AKADNNGVLNGDSTIRNIKSMMRGVLNTQVKHIQGS 353 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN---L 394 + A +GI T DG LEL++ K ALK D G+ G + + N Sbjct: 354 IHSFADLGILT-KRDGTLELNSSKFEDALKNDMQGIADFFTATGVASDTLVSFDKNSSLT 412 Query: 395 TSWLSTTGIIKAATDGVSKT--LNKLTKDYNAASDRIDAQVARY--------KEQFTQLD 444 I+K AT K ++ LT N+ +D ++ Y ++ + +D Sbjct: 413 KPGTYDVEILKLATQATLKDGLVSSLTPSVNSGNDTFKMRIDGYLSEDIVLSQKTYASID 472 Query: 445 VLMTSLN 451 L T + Sbjct: 473 DLATEMQ 479 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 33/77 (42%) Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 I + I + +++GII D + K + L + R+D AR + F +D Sbjct: 603 IDSNISGSSGDTSTSSGIIDGKVDSLYKKIALLDTRKESLIYRMDKLEARLYKNFNAMDS 662 Query: 446 LMTSLNSTSSYLTQQFE 462 ++ + +T + L + Sbjct: 663 AVSMMGNTMTNLKNSLK 679 >UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYT6_HALOH Length = 448 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 114/471 (24%), Positives = 218/471 (46%), Gaps = 38/471 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S S G+G+GLD + I+D + ++ + + QQ + LSA+G+++S L +F++ Sbjct: 2 SFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKVD 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + +F + T + T T +A G Y I +T LAQ+ + + D T Sbjct: 62 DI--ESIFGKMAVTVNDTEVVDVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLN 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSV 180 + T G + D SL I++ IN + GV+A+II+ L + Sbjct: 120 LSG----TFSINGTDITVNTD-----DSLEDIKNLINQTSDTGVTANIIDNT-----LVL 165 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 SN+TG N++++S D Q +G + A+ AQ+A +++ ++I SSN Sbjct: 166 KSNETGTTNSISISDVSDSVAQQ-LGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNE 224 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 I+D ++ +T++L + T+ +D IK + +YNS T SS+T+ Sbjct: 225 INDVIQGVTISLKKGGGASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTE------ 278 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELD 358 +G L GD TL I +L+ L++ +S+ L+ IGI +D G + ++ Sbjct: 279 -------KDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIESD-RYGNISVN 330 Query: 359 ADKLTAALKKDASGVGALIVGDGKK---TGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +L+ AL+ V AL +G+ + + L+S L + G + + + + + Sbjct: 331 ETELSDALENSFEDVKALFTATSSTEGYSGLQERMSNYLSSILDSNGFVDGTKEMLQEQI 390 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + ++ + + + ++ F ++ + S+N+ S+L QF N S+ Sbjct: 391 DDINEEIQDLEYSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMSS 441 >UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXZ1_JANMA Length = 672 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 149/406 (36%), Positives = 231/406 (56%), Gaps = 35/406 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++S++GVGSGL L +L L A+ LT ++ +++S+ AKLSAYGTL AL+ FQ+A Sbjct: 2 AVSTIGVGSGLPLDDLLTKLMTAESQPLTLMAKKEASYQAKLSAYGTLNGALSAFQSAMA 61 Query: 63 ALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L K+ F + +T + T S T + A G Y I+VT LAQA +L+T T Sbjct: 62 TLGKSSTFDNLQTTVADKTILSGTASTKAATGNYQINVTQLAQAHSLSTAGQTSKTALIG 121 Query: 122 ATSDSKLTIQQG--------------------GDKDPITIDISAANSSLSGIRDAINNAK 161 + + + LT Q G + T+ I ++SL GIRDA+N A Sbjct: 122 SGATTTLTFQFGSITGGTLTDGKYTGATFTQDAKQATGTVTIKNGDNSLQGIRDAVNAAN 181 Query: 162 AGVSASIINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 GV+A++++ G + L TSN TG ++M + V GD ALQS +GYD A + ++ + Sbjct: 182 IGVTATLVSNGSDAPDHLVFTSNKTGAASSMKIDVDGDPALQSLLGYDP-AGTQSLKQNS 240 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 A QN QLTVN +++ +N + +A++ +TLN++ V GN T+TI +DT+ +T++KD++ Sbjct: 241 AGQNTQLTVNGFFVDSQTNEVKEAVQGVTLNVSKV--GNTTMTIAKDTAAVETSVKDFIK 298 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK- 339 AYN L T LT Y D+++++ G L+GDST+RTIQ Q+ LS ++ S Sbjct: 299 AYNDLNATIKKLTAY-------DAKTNTGGLLVGDSTVRTIQEQISKTLSASLEGLSNTN 351 Query: 340 -TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 +L QIGIT DG L +D+ KL+ A++ + + + L GK T Sbjct: 352 MSLPQIGITVQ-RDGTLAVDSAKLSKAMETNYNDIAGLFATVGKAT 396 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 45/80 (56%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 G + S++ + G+I T+ ++ + ++T D +A R+ A ARY++QF+ Sbjct: 584 SQGYADRLNKLTDSFIGSEGLIAGNTNSLNSDIKRVTDDADAFKIRLTAIEARYRKQFSA 643 Query: 443 LDVLMTSLNSTSSYLTQQFE 462 LD L+ S+ +T +YLTQQ Sbjct: 644 LDALVASMQTTQNYLTQQLA 663 >UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTT2_DESHD Length = 510 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 108/517 (20%), Positives = 221/517 (42%), Gaps = 62/517 (11%) Query: 3 SISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--T 59 +I + G+ GSG+D+ ++ + +A++ + +++ K + Y T+ + + +F+ T Sbjct: 2 AIRTYGLSGSGMDVDQMVKDMMSARREQYDKLWQKKTQLEWKKTDYNTMYNTIQSFRNTT 61 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT------- 112 A + T+S+ +AT +A +I+V LAQ +T+ Sbjct: 62 AFNYRLSSTTIPKIVTSSAEGIVTATANADAANVSRSITVGQLAQGANVTSTGKITEEGR 121 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T+D + + + G TI + + S+ +N + + AS Sbjct: 122 TKDSLMSQFGLEEGTFAVVLGDGSTSKTIQVDTSK-SIYDFVSDLNKSGLKIRASYDATL 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM-----------GYDASASSNGMEVSVA 221 + R ++++ TG D A+ + + + + F+ G + + ++ Sbjct: 181 D---RFNISTTGTGEDVAIDFTGTTSEKGKEFLEKLQLHVVKEDGGGGTTTEPITSEAIK 237 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 ++A++ ++ I +S NT + +T L TG+ + ++ D KA + +KD+V+ Sbjct: 238 GKDAEVVLDGATITHSGNTFTAF--GVTYTLKA--TGDANIHVSADNDKAVSVVKDFVDQ 293 Query: 282 YNSLIDTFSSLTKYTAVDA-----------------GADSQSSSNGALLGDSTLRTIQTQ 324 YN+L++T +S + + + +G L DSTL+++ + Sbjct: 294 YNALLETINSELNEAKYKSYMPLTNEMKGQLGDSQITQWEEMARSGLLRNDSTLQSLIYK 353 Query: 325 LKSMLSNTVSS--SSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVG 379 L++ ++ VS Y +L+ IG+TT GKL LD +L AL+ D V L Sbjct: 354 LRNDIATPVSGVEGKYNSLSAIGVTTGKDYLEGGKLYLDETELKKALEADPDIVNKLFGS 413 Query: 380 DGKK---TGITTTIGSNLTSWLST-------TGIIKAATDG-VSKTLNKLTKDYNAASDR 428 G+ G I +L S + TG IK T+ ++K + + +DR Sbjct: 414 SGEDRNSQGAAVRIYDSLKSTMDNIKETAGITGTIKGDTESTLAKQIRDYEDSLDRMNDR 473 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + RY +QF +++ ++ L+ SS+L F + + Sbjct: 474 LSQMEERYYKQFNAMELALSKLSQQSSWLANMFSSGN 510 >UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VJE6_PSEU5 Length = 468 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 138/479 (28%), Positives = 239/479 (49%), Gaps = 27/479 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+ I+ G+G+GLD+ ++ ++ A+KA I + LSA GTL SA+ TF+ Sbjct: 1 MSGITISGLGTGLDIGGMVTAIADAEKAPKQAQIDRLTTKTETSLSAVGTLTSAVETFEA 60 Query: 60 ANTAL--SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + TAL S + +S+ SAT A+ G Y + V LA + + + + Sbjct: 61 SLTALESSSSSFEGLGVQSSADGVASATAGAGAVPGSYEVEVISLASSSKVASASLEGGA 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINVGNG 174 T + LTI G D + ++ +SL+ IRDAIN+ A AG+SA+II +G Sbjct: 121 STTFDSG-GTLTIDVG-DNASYEVQVAPG-ASLTEIRDAINSQLSATAGISANIITDASG 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA------SSNGMEVSVAAQNAQLT 228 RL ++S TG + + +GD A + + S G A NA Sbjct: 178 A-RLVLSSEVTGEGTDLYVKGTGDLAALNINVDEDGNHDLTQQSGTGAGSITLASNASYK 236 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 ++ + + +S+NT++ AL +++ L G TLT+ +T +T+I+ +V+AYN+LI Sbjct: 237 IDGLELSSSTNTVT-ALSGLSIKL--TAEGTTTLTVAPNTEGLKTSIEAFVSAYNNLITV 293 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YKTLAQIGIT 347 ++LT+ T + D S+ GAL+GD+ +R++ +++ L + S LAQ+G+T Sbjct: 294 TNALTRVTTSE---DETSTDAGALVGDALVRSLLGSIRNELVQPSTGSGELSVLAQLGVT 350 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 T+ DG L +D KL++AL+ V A VGD G+ + S + + G++ Sbjct: 351 TN-KDGTLSIDDAKLSSALETHYDEVQAFFVGD---DGLIPRLKSVTEPYTAPGGLLAGR 406 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 T+ + KT+ +L++ A RID+ ++ +D+L+ L +TS + +N Sbjct: 407 TESLQKTMTQLSEQQQALDRRIDSLTTSLYTKYNNMDILVAQLQATSESILATLNALNN 465 >UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein, enables filament assembly n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5J6_PELCD Length = 442 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 126/473 (26%), Positives = 217/473 (45%), Gaps = 46/473 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++I+ G+ SG+D SI+D+L +K L + + + FT++ A+ TL++ L T Sbjct: 1 MSTINFGGLASGMDTGSIVDALMEIEKQPLERLESDKEYFTSRQDAFDTLETKLKTLLGK 60 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + A S ++ S FS + +G+A+ G Y I V LA+ Q + + + Sbjct: 61 FEDLDSSGEVRAYSASAVSDEYFSVSASGSALGGSYNIEVQSLARQQKDVSDGSYESRSE 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-----AGVSASIINVGNG 174 A T+ + T DI+ N SL + D IN A GV+ASII G+G Sbjct: 121 ANFTTGT---------LTIGTTDITIDNDSLDSLVDKINAANTGDSATGVAASIIQDGSG 171 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 YR+ +T D + + SVSG + S + + A + V+ V I Sbjct: 172 -YRMILTGED--ASSTFSASVSGGTTANGYAALTFSTTQTQSQ-------ASIVVDGVTI 221 Query: 235 ENSSNTISDALENITLNLNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 SNT +A+ +++ LN V + +++D +T +KD V AYN++I+ S Sbjct: 222 TGGSNTFEEAIPGVSITLNKVHPNAGDTTVMNVSEDVDAVKTKVKDMVTAYNAVINYIS- 280 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSSSYKTLAQIGITTDP 350 D + S G DS + ++ L+ ML++ + + TL+Q+G+ T Sbjct: 281 -----------DQKDSDWG---RDSGMMAVKRNLQKMLTSQIATGGDLTTLSQLGLETQ- 325 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATD 409 DG + +D L A+ D + + L+ G GI++ L S G+ Sbjct: 326 RDGTITIDNTLLEEAITTDMNIMDKLLAGGEGFDGISSLFTEYLDSTTDRVDGLAATRQT 385 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 +TL + + + R++ + + QF +++L+++LNST SYLTQQ Sbjct: 386 STDRTLKTINANISKMETRLEKREEMLRAQFDAMELLISNLNSTGSYLTQQLS 438 >UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 Tax=Pseudomonas RepID=A5W0I8_PSEP1 Length = 470 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 130/478 (27%), Positives = 226/478 (47%), Gaps = 33/478 (6%) Query: 1 MAS--ISSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 MAS +SS+G G+GL+++ ++ +L A A I+ Q S+ TA +S G+L+SALT F Sbjct: 1 MASTLVSSIGQGTGLNITEMVAALVNADTAAKKAQITRQTSNNTAMISGVGSLRSALTAF 60 Query: 58 QTANTALSKAD---LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR 114 Q A L+ + + + +++ + T A+AG Y I V LA + + Sbjct: 61 QDAMAKLNSSTSPAFNAYAAKSANESVVKVTAGNTAVAGSYDIVVNKLATGSKVASAPIA 120 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVG 172 + + LTI+Q G+ + ++ A SL +RD IN A G+SA+I+N Sbjct: 121 GGAAATV--TGGTLTIEQNGNTYELEVEDGA---SLQSVRDQINKELAVQGISANIVNGK 175 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +G RL +S TG D + +S + G + + ++ AQ+A+LT++ + Sbjct: 176 DGA-RLVFSSTTTGADTDLMVSGVPE---LEIDGTQQMSDTGAGFITAMAQDAELTIDGL 231 Query: 233 AIENSSNTISDALENITLNLNDVTTG------NQTLTITQDTSKAQTAIKDWVNAYNSLI 286 + N NTI+DA+ ITL L V+ ++++QD + +++ +V+AYN+L Sbjct: 232 VVTNKKNTITDAISGITLELTGVSARSGADGVPTNVSVSQDNDGLRKSVQSFVDAYNTLQ 291 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 T ++LT T + + S G L D T R++ ++ +LS + TL+Q+GI Sbjct: 292 KTITALTTSTRDE----DDNLSLGPLSNDPTTRSLVNDIRKVLSEVGAGDQLTTLSQLGI 347 Query: 347 TTDPSDGKLELDADKLTAALKKD--ASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 T DG LE ++ K TAA+ S V L G G+ + + + ST G + Sbjct: 348 NT-TKDGTLEFNSTKFTAAMNDKKLGSEVQELFTG---SNGLIERMNKAIDPYNSTDGSL 403 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + K L A R +A +++ +D + LN+ + + F+ Sbjct: 404 ATRKSNLDKVAKNLADQQTALDRRTEALTESLTKKWVAMDTAVAKLNAQADQIKSVFD 461 >UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseudomonas RepID=Q4KG76_PSEF5 Length = 484 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 138/488 (28%), Positives = 242/488 (49%), Gaps = 32/488 (6%) Query: 1 MAS--ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTF 57 MAS + G+GSGLD +I+ +L AA KA I ++ +A +S GTL+S L+TF Sbjct: 1 MASPILPGTGLGSGLDTGAIVKALVAADKAAKQGQIDRATTTNSASISGIGTLQSLLSTF 60 Query: 58 QTANT-----ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT 112 Q+ + + +T+S + AT A+AGKY+++V +LA + + + Sbjct: 61 QSTLSVAGLGSSVNPAFAGFAATSSDSKTVDATADNYAVAGKYSVTVKNLATSSKVASAA 120 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK----AGVSASI 168 +AI + L I Q G P+T+ AN++L +RD+IN AG+SA+I Sbjct: 121 FSGGNTSAIPS--GTLNITQNGINYPLTV---GANATLQSVRDSINADSKMNMAGLSANI 175 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSG----DDALQSFMGYDASASSNGMEVSVAAQN 224 + G RL + S TG +++S D + +++++ + A++ Sbjct: 176 VTDSFGS-RLVIGSEKTGAGTDISVSGIAGLEIDGTQPMSSDTNPASAASSGNIGGLAKD 234 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 A +V+ + + + +NT++ A+ + LNL TT T+T+ +T +T+I+ +V+AYN+ Sbjct: 235 AVFSVDGMQLTSKTNTVTQAISGLKLNLVAPTTTPITVTVATNTEGLKTSIQKFVDAYNA 294 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI 344 + + ++LTK + D+G + + L GDS R+I +++ LS T + LAQ+ Sbjct: 295 VANGITTLTKPSLDDSGNPTIPAQ---LTGDSLPRSILAAIRAPLSETGAGDKLTVLAQL 351 Query: 345 GITTDPSDGKLELDADKLTAALKKD--ASGVGALIVGDGKKTGITTTIGSNLTSWLS--- 399 GITT+ G L+ D K TAA+ V L GDG G+ + + + + Sbjct: 352 GITTNQKTGALDFDDKKFTAAMTDKKLGGEVQKLFTGDGTNPGLLERMTNAIKPFTQGVG 411 Query: 400 --TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 T GI+ T + T KL+ +A R+ A +++ +D L+ L +T+S + Sbjct: 412 SMTEGILTTRTKTLDITKKKLSDQQDALDRRVATLTAVLTKKYNDMDTLVGKLKATASNI 471 Query: 458 TQQFENNS 465 T FE + Sbjct: 472 TSMFEALT 479 >UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE2_ALKMQ Length = 558 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 105/563 (18%), Positives = 202/563 (35%), Gaps = 110/563 (19%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF------ 57 + G+ SG+D +++ L A++ + Q+ + + AY + + F Sbjct: 1 MRIGGIASGMDTEQMVNDLMRAERMRMDRFFQQEQTVKWRQEAYNDVNKTMANFILDTRK 60 Query: 58 ----------QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT 107 + +K+ + +T ++ +T NA++G + + V LA+ + Sbjct: 61 AFGLNTTSNTGSIQNHSAKSFDWVKQATGTNENIVKSTATANAMSGSHKVEVQQLAEVAS 120 Query: 108 LTT-----RTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 ++T DD+ I + +T + G IT + ++S + INNA A Sbjct: 121 VSTVDLKEAAVVDDSGKFIQGGEITVTAKDGSKTIEIT-----TSMTMSDLVREINNATA 175 Query: 163 GVSASIINV-------GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM-----GYDAS 210 S + ++ +T+ ++G + + ++ D D Sbjct: 176 DAGDSEGKSLGLRAAYDSSLGQMMITTRESGEEQTIKVTYDEDGLSSKMFKVKTDDADMP 235 Query: 211 ASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSK 270 ++ NA++ N ++ ++N S + I L L V+ T+ + D Sbjct: 236 IPGTNPFEDISGTNAKILFNGDKVDKATNNFS--IYGINLQLQSVSDIEVTINVDTDVDG 293 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQSSSNGALL 313 I D+VN+YN L+DT + T T D A + S +G L Sbjct: 294 IFNQISDFVNSYNELLDTMNGATGEKHYRDFPPLTKEQKEGMTEKDIEAWEEKSKSGLLK 353 Query: 314 GDSTLRTIQTQLKSMLSNTVSSS-----------SYKTLAQIGITTD--PSDGKLELDAD 360 D L ++S L V+S Y + Q+GITT S GKLE++ + Sbjct: 354 NDEVLTRTSQSMRSSLYQDVNSGIDEDGNQIKLSGYSHITQVGITTGNYQSGGKLEINEE 413 Query: 361 KLTAALKKDASGVGALIVGDGK----------------KTGITTTIGSNLTSWLSTT--- 401 KL AA+ ++ GV L +TG+ I ++T+ + Sbjct: 414 KLRAAINENPEGVMDLFFKSPSPLPKDATAEQKKQHKSETGLVQRIYDDMTAGMKEVIRH 473 Query: 402 ---------------------GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQF 440 ++ + K L + + + + RY +QF Sbjct: 474 SGPGEDSSLYRNVQSNMLIDFVTEHSSISRLDKELTTVNQRIAREEQILARREERYWQQF 533 Query: 441 TQLDVLMTSLNSTSSYLTQQFEN 463 T ++ M+ +N S +L Q Sbjct: 534 TAMEKAMSQMNQQSDWLMAQMYG 556 >UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas putida KT2440 RepID=Q88ES7_PSEPK Length = 452 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 136/471 (28%), Positives = 234/471 (49%), Gaps = 27/471 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAK-LSAYGTLKSALTTFQT 59 MAS + G+GSG+D SI+ +L A+KA Q T +SA G +K+AL TF++ Sbjct: 1 MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60 Query: 60 ANTALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A L+ + F+ + TSS + AT +A AG Y + VT LA + +TT Sbjct: 61 AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVS 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 + + S T+ + I ++L +RD IN G++A+I+ G Sbjct: 121 SVVNNSGDPQTLTISQSSADYNVTIPDG-ATLQQVRDLINKQLGSQGINANILTDAKGS- 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL ++S+ TG + +TLS S+ AQNA+ T++ + +E+ Sbjct: 179 RLVMSSSTTGEGSDITLSGD-------------SSLVQNATPGAPAQNAKYTIDGLELES 225 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SNT++ A+ + L + G L++ +T+ +T+++ +V+AYN+LI ++ TK T Sbjct: 226 KSNTVTGAISGVNFEL--LAEGKSRLSVATNTTTLKTSVQSFVSAYNALITAINTQTKVT 283 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 A D+ +++ GAL GD+T+R + + +++ L + + S L+Q+GI TD G L Sbjct: 284 AT---GDASTTTAGALTGDATMRALVSTVRNELVKSTGAGSISMLSQMGINTDQQTGLLV 340 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 LD K A+ K A+ + A+ GD G+ + + ++ TTGI+ T ++ L Sbjct: 341 LDDTKWDKAVAKGAADIAAVFTGD---KGLIKRMTAATDAYTGTTGILATRTKNLNDNLT 397 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 +LTK A RI+ A ++ +D L+ LN+TSS + + + Sbjct: 398 ELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSSSVMTTLNAMNKA 448 >UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z883_9NEIS Length = 463 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 133/470 (28%), Positives = 241/470 (51%), Gaps = 40/470 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI++ LD+ SI+ L ++ +T ++ S F +LSA G + S L++ QTA Sbjct: 1 MASITTS--VGALDVQSIVSQLMTIEQQPMTASQSRVSKFNTQLSAVGKISSGLSSLQTA 58 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT-- 117 +L+ + +++S +T S T+ +AG Y +++T LAQ + L D T Sbjct: 59 IRSLASGSFLQSYKASSSDSTIASVATSAATVAGSYALNITSLAQPRQLVFDKYADGTAI 118 Query: 118 ---KTAIATSDSKLTIQQGGD-KDPITIDISAANS-SLSGIRDAINNAKAGVSASIINVG 172 IA++ LT GG PI++ + +S +L+ +RD IN A GV+A+I+N Sbjct: 119 TDPTAVIASAPDSLTFTVGGKATTPISLRDNPGDSVTLNSMRDRINQAGVGVTANIVN-N 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG------YDASASSNGMEVSVAAQNAQ 226 NG Y+L +TS ++G DNA +S G + + ++ +++ + S AAQNA Sbjct: 178 NGNYKLVITSTNSGSDNAFLISAGGAEPADASSPASLGGLTQSTGTASAISESHAAQNAA 237 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LT+N V++ +SN ++DA+ +TL+L+ TG ++ + QD+ TA++ +V+AYN + Sbjct: 238 LTINGVSVSTASNHLTDAIAGLTLDLSK--TGEASINVVQDSDGITTALQAFVDAYNQVH 295 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS----SYKTLA 342 ++S+ ++ G++++ I++Q+ S+L+ VS + SY LA Sbjct: 296 SA---------------AESARTDSMKGNASVLAIESQMTSILATPVSGANPYNSYAYLA 340 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 Q+GI+ DG L+LD AL D + V L G+ G + + L G Sbjct: 341 QVGISIQ-KDGTLKLDKTAFNTALSADPAAVKNLF-GNSNNDGFADRFNAVINQLLGPDG 398 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 II+++ ++ ++ T ++D +Y +Q+T L+ ++ + S Sbjct: 399 IIESSKSSINSRIDFETNYQTGLQSKLDRLKTQYTQQYTNLNAILAKMQS 448 >UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BD21_SANKS Length = 460 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 105/463 (22%), Positives = 200/463 (43%), Gaps = 12/463 (2%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S++ G+ SGL S +++ L + T + + ++ A ++A L + +++ Sbjct: 2 SLAVDGMISGLKTSELINQLMQVEAMPQTMLKQKVTTTQAFITALQGLNTRVSSLADVAK 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 +K + + AT+ +SS T+ TT+ + + +V LA+ QT + D Sbjct: 62 TAAKPESWQATTASSSATSVKVTTSAGSQPSTLSFTVDRLAKPQTSVSAAVTDLDSYFPD 121 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSS-LSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 LTI G P + + A + L+G+ +N A +G++AS++ V E RL +T Sbjct: 122 GVPENLTIVSGPASKPTLVTVDLAGVTDLAGLATKLNAAGSGITASVVKVSATESRLQIT 181 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV-NNVAIENSSNT 240 TG+D A + G + + + V A +AQ+++ + + ++SNT Sbjct: 182 GKSTGVDGAFDIHR-GKVTAEDLAAGASDLVVDRSTALVQAVDAQISLWDGTPVTSASNT 240 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 SD L+ ++ ++ V T+T ++ + D V + ++ +S T T + Sbjct: 241 FSDVLKGVSFTVSAVEATPVTVTTVRNDAALTKLASDLVGSVGVVLSEIASRTSTTTTTS 300 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 + G L GDS R I + + LS V S +++GIT + DG D Sbjct: 301 TDGRTVIAGGVLSGDSATRGIGQSITTALSYPVDGISP---SEVGITLN-KDGTFTFDQA 356 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 K T AL KD V ++ G G++ + S+ G + LT+ Sbjct: 357 KFTEALGKDPEKVQRVVSGLGERVADASKRISDP-----IDGSLTLKVKSQESFSKGLTE 411 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + R++ + + + + L+V ++ L S SS+L Q + Sbjct: 412 QVSDWDRRLETRRSGLQRTYAALEVTLSGLQSQSSWLAGQIGS 454 >UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadales RepID=B4RV22_ALTMD Length = 471 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 125/484 (25%), Positives = 233/484 (48%), Gaps = 41/484 (8%) Query: 1 MASISSLGVGSGLDLSSILDS-LTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+I++ GVGSGLDL +I+ + L A+ + L ++++S +L+ G +KS ++ Q Sbjct: 1 MATITNAGVGSGLDLEAIISATLQASNQPKLQKFASRESELEVQLTGIGGIKSVMSKLQD 60 Query: 60 ANTALSKADLFSATSTTSS--------TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 L+ + F+ + S ++ A G + I+V LA+ T Sbjct: 61 VFEELASPEEFNQRVASVRQPSNSAELGDLVSVSSDKTATTGAFEINVLQLAKGSRAQTD 120 Query: 112 TT-----RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVS 165 T + + TS LT G + I I+ A S+L IR AIN ++ +G+S Sbjct: 121 ATNPANAFNSADEVVTTSAGILTFTAGENSFDIDIE---AGSTLEDIRQAINSDSSSGIS 177 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQN 224 A+IIN G + L + + +TG N + ++ + + S + A + AQ+ Sbjct: 178 ANIINTGT-QTLLVIEAAETGSGNDLVITNNNAELDRLSTVANGGGAGGLEIGAEDQAQD 236 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAY 282 A + V+ + I N+SN S+A++ +T+ + N+T + + D I ++++A+ Sbjct: 237 AIIEVDGIQISNTSNVFSNAVQGLTITAERQSETNETANVNVAFDREGVTEKIDEFISAF 296 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTL 341 N+ ID + S+ + L GD+T+R I+ QL + L+ TV + ++T+ Sbjct: 297 NNTIDMIGQQS------------SAVSSPLFGDATVRAIKDQLTNALTTTVGNAGDFETI 344 Query: 342 AQIGITTDPSDGKLELDA--DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 IG++ + +GKLE + L+ AL + S +G L G GI T GS L +++ Sbjct: 345 FDIGLSLN-ENGKLEKENVVRSLSEALDTNFSDIGKLFTNPG---GIADTFGSILENYVD 400 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 ++G++K D ++ + L D R++ + ++++ LD L+ S+ S+ YL Sbjct: 401 SSGVLKQRQDILNLQKDDLEDDRLDHQFRMEQLESSLRKKYASLDTLIASMRSSGDYLMG 460 Query: 460 QFEN 463 Q + Sbjct: 461 QLSS 464 >UniRef50_Q5ZVV2 Flagellar hook associated protein 2 FliD n=5 Tax=Legionella RepID=Q5ZVV2_LEGPH Length = 541 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 139/546 (25%), Positives = 226/546 (41%), Gaps = 100/546 (18%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SS GVGSGLD+ +++D++ A+ Q +S +LSA G LKS LT QT+ Sbjct: 3 LSSPGVGSGLDVKNLVDAIVTAEITPSQVRHDKQLNSVNTELSALGQLKSYLTNLQTSLA 62 Query: 63 ALSKAD-LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LS ++ ST S FSAT A Y I + LAQ +L + + I Sbjct: 63 KLSSLSQFYTMKSTISDPNYFSATLGTGATKNTYQIEIQKLAQQHSLASSYMTNTGSGTI 122 Query: 122 ATSDSKL-----TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T + I I+ N SL +RDAINN +G++ASI+ G Sbjct: 123 TIDFGTYNSDKTTFTPNPSATSVNITITPGNDSLVAVRDAINNTNSGITASIVQDSQGS- 181 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL++TS+ TG + AM +S + + YD + N + +VAAQN+ + +N + + Sbjct: 182 RLTITSSKTGENYAMKIS-----GGVASLNYDPTMGVNSLTETVAAQNSTVKINGLTLVQ 236 Query: 237 SSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSN +++A+ +T++L G TLT+ + + I +++ YN + ++LT Y Sbjct: 237 SSNQLNEAITGVTIDLKKAEIGKIVTLTVDDNKDQLTGLINEFIKQYNDTMTFLTNLTGY 296 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDG 353 ++++ G GD R ++ L + +++ ++LA +GI T+ G Sbjct: 297 -------NNETKQGGVFQGDPQFRNLKLNLNKWATTPLANQEGPIRSLADLGIITN-KQG 348 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKT---------------GITTTIGSNLTSWL 398 LE+ DK AL +GAL K G + + T + Sbjct: 349 LLEIKQDKFKTALDNHYKEIGALFAKTAKANDTGINVKSINSTVKSGTYDVVLTEFTPGV 408 Query: 399 STTGIIKAA------------------------------------TDGVSKTLNKLTKDY 422 S +G I TDG++ L+ L Y Sbjct: 409 SMSGTIGGLSAISSDGITLTGSADLSGLSINVFSGSAGSRGQITVTDGIAVQLSSLLDAY 468 Query: 423 NAASDRIDAQVAR-------------------------YKEQFTQLDVLMTSLNSTSSYL 457 ++ + + Y +QFT LD L++ L STS +L Sbjct: 469 IEIKGDLEQRKDQLNNQVKQLNKIQNEIDIRRKSIETRYLKQFTALDTLLSQLQSTSVFL 528 Query: 458 TQQFEN 463 +QQ N Sbjct: 529 SQQLAN 534 >UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 Tax=cellular organisms RepID=A1TVF1_ACIAC Length = 478 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 119/468 (25%), Positives = 211/468 (45%), Gaps = 32/468 (6%) Query: 13 LDLSSILDSLTAAQKATLTP---ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 ++++ ++ + A K +T +S Q + +K+SA+G LKS ++T A L+ Sbjct: 15 VNVNDLIKASVDAVKLPITRTNGLSQQAAVTNSKVSAFGQLKSLVSTLSDAANKLTSVTG 74 Query: 70 FSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 ++ + TSS+T F + + G A A + + V +LA+AQ+ + + A + + Sbjct: 75 WNGVAATSSSTDFVTVSAVGGAAATSFNVQVQNLAKAQSSISDSLTPAKSAVGAGTLTLT 134 Query: 129 TIQQGGDKDPITIDIS-------AANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T G AA +L + IN +KAGV+A+++ +G+ RL + Sbjct: 135 TGTWSGSPKSFAAGADEGVKIDVAATDTLEDVASKINGSKAGVTATVLTDASGQ-RLMLR 193 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S TG LSVS D S + S E AQNA TVN VA+ + +N Sbjct: 194 SKTTGESAGYQLSVSDADGNNSDAAGLSRLLSGSTE---YAQNANATVNGVAVTSGTNVF 250 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 ++ + +T TT + ++T+T+D S + I+ +V AYN++ + TKY Sbjct: 251 ANTVAGVTFTAVKPTTTDVSITVTKDNSAVKANIQAFVTAYNAVNSALNESTKY------ 304 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS------DGKL 355 D + + G L GDS T+Q L+ L + S + ++L+++G+ + DG L Sbjct: 305 -DKDTKTAGLLQGDSGAVTLQNTLRMALQSVNQSGALRSLSEVGVVSAGGSGNLSPDGSL 363 Query: 356 ELDADKLTAALKKDASGVGALIVGDGK---KTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 LDA K A++ + V A G G + + L++ G Sbjct: 364 TLDATKFDKAMQ-NPDDVKAFFRGADGGSVTDGFAGKFKAVTSRLLASDGFFAGKDQSYK 422 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + L + D ++R ++T LD M+++N+ +SY+ QQ Sbjct: 423 EMLKRNAADIERINERASEVEKNLTARYTALDTKMSNMNALNSYIQQQ 470 >UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament cap protein) n=2 Tax=unclassified Gammaproteobacteria RepID=A4A604_9GAMM Length = 680 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 120/409 (29%), Positives = 221/409 (54%), Gaps = 42/409 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++ G+GSGLD+ ++ SL A++A + Q++ T++LSA+GTL+ AL+ Q++ Sbjct: 2 VAATGIGSGLDIEGLVTSLVNAERAPAENRLLTQEAELTSELSAFGTLQGALSGLQSSVA 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+ + F+ S TSS A S + + NA Y I V LAQAQ+L + + T T Sbjct: 62 GLTNQNTFNQRSATSSNAAAVSVSASTNAAPSSYQIQVDQLAQAQSLASGSFTSLTDT-- 119 Query: 122 ATSDSKLTIQQGG---------------------DKDPITIDISAANSSLSGIRDAINNA 160 + LT + G D+ ++ I ++N++L G+ DAIN A Sbjct: 120 -VGEGTLTFRFGTTDYTPAADLNPANYNGFTVNADRASASVTIDSSNNTLQGLSDAINEA 178 Query: 161 KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSG-----DDALQSFMGYDASASSNG 215 GV+A+I+N G G +RL ++S TG N++ + V D+ + +AS++ Sbjct: 179 DIGVAAAIVNDGTG-FRLLLSSEQTGASNSIEVQVDDTGDGLDNDNEGLSRLAFNASADN 237 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 +E +VA Q+A ++N +++ + +N++++ ++ ++L L D T TL+++++TS ++AI Sbjct: 238 LEQTVAGQSAAFSINGLSLSSETNSVANVIDGVSLTLRDTTDTPATLSVSENTSAVRSAI 297 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 +V AYNS + T ++LT + ++++ + L GD T R++ Q++S LS++ Sbjct: 298 DGFVTAYNSFVSTANNLTAF-------NAETGAAAPLQGDFTARSVINQVRSALSSSADG 350 Query: 336 --SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 + TLA++G+TT +G L ++ L AAL + V + G Sbjct: 351 FEGPFSTLAELGVTTQA-NGTLSVNDSTLDAALTDNFESVAGVFAQVGS 398 Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 GI + L T G++ TDG+ ++++ D +A R++A +RY+ QF Sbjct: 590 SNGIGIALNGVLEGLTQTNGVLDLRTDGLQSGVDRIADDRDALDRRLEALESRYRRQFNA 649 Query: 443 LDVLMTSLNSTSSYLTQQFEN 463 LD L+ +++ST S++TQQ N Sbjct: 650 LDTLLANISSTGSFITQQLAN 670 >UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCW2_HAHCH Length = 656 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 127/392 (32%), Positives = 225/392 (57%), Gaps = 20/392 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS+SS+G+GSG+ S +++ L +A++ + ++ TAKLS LKSA+T + Sbjct: 1 MASVSSIGIGSGVLTSDLIEQLASAEREPTEKRLDLKEDEVTAKLSDLSRLKSAITDLRL 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + LS + S+ + TSS ++ T +A G Y ++V++LA AQ+L++ T D T Sbjct: 61 SARTLSTPESMSSNTATSSGSSIGVTANTSAKTGSYALTVSNLAVAQSLSSGTFADKDTT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + T L+ GG + +T+D ++N++L G+ DAIN+ V++S+I G+ Y+L Sbjct: 121 TVGT--GTLSFTVGGVTENLTVD--SSNNTLQGLSDAINDMGLDVNSSVIYNGS-SYQLV 175 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMG----YDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++++ TGL NA+++S + +D + + +A++ + VAA++A T+N VAI Sbjct: 176 LSASKTGLANAISISATDNDGNSTDASGISQFIYNATNQNLTQDVAAEDAAFTLNGVAIT 235 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 S NT+ D ++ +TL LN T +T+++D + ++D V+ YN+L + + +T + Sbjct: 236 RSLNTVDDVVDGLTLTLNAETASAVNVTVSKDLNAVTERVQDLVDKYNALQEIINEVTAF 295 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPSD 352 DS + G LLG ST+RTI TQL+S LS+ V S+ ++L+++GITT+ Sbjct: 296 -------DSDTGEKGTLLGSSTVRTISTQLRSTLSSIVPGLESSNVRSLSELGITTNSES 348 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKT 384 G+LE ++ + L+ + V AL G+ T Sbjct: 349 GQLEFNSLTFQSKLQSYPNDVAALFADQGRTT 380 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 44/78 (56%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ + + S+LS+ G+I A +G + L K+++D DRI A R QFT D Sbjct: 568 GVGDQMVDLVNSYLSSEGLITVAINGFNSQLEKISEDRTELDDRITALTDRLARQFTAAD 627 Query: 445 VLMTSLNSTSSYLTQQFE 462 ++++ L +T ++L+ Q E Sbjct: 628 LIISQLKNTENFLSTQLE 645 >UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y1_9GAMM Length = 1315 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 118/411 (28%), Positives = 207/411 (50%), Gaps = 35/411 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASI SLG+GS L S +++++ A KA + +Q A++SAYG ++S L F Sbjct: 1 MASIESLGIGSDLLTSDLVENIINADKAAGELRLDTKQQIIDAEISAYGEIQSKLFDFSE 60 Query: 60 ANTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ AD AT+ TSS + +AT + +A G Y++ V +A+A +L +++ T Sbjct: 61 SIVALADADNVGATTATSSDDSILTATASSSAPEGNYSVEVQRIAKAHSLVSQSFSSTTA 120 Query: 119 TAIATS-------------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T + + I+I A N++LSG+RDAINNA GV Sbjct: 121 TVGTGTLEFKFGTTSYTGGGGYDDFDLNTEAASKEIEIDAGNNTLSGLRDAINNADFGVK 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-------SASSNGMEV 218 ASII G+G Y L ++S +TG + +M + + G A M Sbjct: 181 ASIIFDGSG-YVLQMSSEETGENMSMEIVAKDASGALATTGLSAFAYNKNQDTPGTNMTQ 239 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 + Q+A + +N + + SSNT+ + ++ +TLNL G Q T++++ D I+ Sbjct: 240 TQQGQDALINLNGLTVTRSSNTVDELIDGVTLNLKGEDVGKQVTVSVSPDIEGISEKIQK 299 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---S 334 V+ YN+ + + LT + ++ LLGDSTLR+I TQ++S++++TV + Sbjct: 300 MVDTYNAYKEVYDDLTSF-------NADRQQGSLLLGDSTLRSIDTQIRSLMTSTVEGIT 352 Query: 335 SSSYKTLAQIGITTDPSDG-KLELDADKLTAALKKDASGVGALIVGDGKKT 384 +++++ +++GI TD +D K++ DA +++++ V + Sbjct: 353 GTNFRSFSELGIYTDQNDSYKMKFDASLFLKGIRENSEAVTGVFAQTASAD 403 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 104/294 (35%), Gaps = 32/294 (10%) Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 ++ TGLD T++ F+ + VA Q+ L V I+ +++T Sbjct: 1040 STIKTGLDVQGTINGVEASGSGQFLRAQDGNQAATNGYYVAGQSDILN-GPVTIDGTNDT 1098 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV-NAYNSLIDTFSSLTKYTAVD 299 + ++ + + + Q T ++ V +A N + K D Sbjct: 1099 FTIEVDGV----------EAVINVAQGTYATGASLAKAVQDAINETYEDDDISVKVDYTD 1148 Query: 300 AGADSQSSSNGALLGDSTLRT--IQTQLKSMLSNTVS-----SSSYKTLAQIGITTDPSD 352 + + G + + + + + + S A++G D S Sbjct: 1149 DTNSAAFGTIGIISASTGASSEVLINDINAAASTVFGFVQGRGDGEAGKAKVGDVDDASG 1208 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG-IIKAATDGV 411 ++++ L TGI + L +L G ++ D + Sbjct: 1209 LRIKVTGGALGE------------RGSVSYVTGIADRLKDILQGFLDPEGGLLDTKFDTL 1256 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 K +L +D + RI AQ AR K QF D ++ +L +T +YL QQFE + Sbjct: 1257 DKQQEQLDEDRESFEARISAQEARLKSQFLYNDSIIATLKTTENYLKQQFEAMA 1310 >UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV81_METML Length = 561 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 145/408 (35%), Positives = 234/408 (57%), Gaps = 38/408 (9%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 ++ GVGS LD++SI+ SL + +KA LT I+ Q++++ +++SAYGTLKSAL+TFQT+ AL Sbjct: 3 TTSGVGSVLDVTSIVSSLMSVEKAPLTKIATQKTAYQSQISAYGTLKSALSTFQTSVNAL 62 Query: 65 SKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 S F+A S TSS T+ +A++ G A G Y I+V+ LA++Q L + + T Sbjct: 63 SSLSKFNAQSVTSSNTSVLTASSNGTATVGSYDINVSQLAKSQKL-SVGGFSSVSDVVGT 121 Query: 124 SDSKLTIQQ----------------GGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 ++ K I I I ++N++L+G+RDAIN A A V+A+ Sbjct: 122 GSLTISFGTFTPEVAVPFTASSFAPNTAKSDINITIDSSNNTLAGVRDAINAANASVNAT 181 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSN---GMEV 218 I+N G RL +TS DTG N++ ++V+ D S + YD A++ + V Sbjct: 182 IVNDGT-TNRLVITSKDTGEVNSLKIAVTDSDGNNLDASGLSKLAYDPQATAGNGKNLTV 240 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 A+NA L ++ + I SSN+ISDA++ +TLNL +T GN L++ + +T++ Sbjct: 241 LQDAKNALLKIDGIDIVKSSNSISDAIDGVTLNLLGLTAGNALNLSVATNQDAVKTSVSS 300 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSS 336 +V+AYN L T SLTK+ D +NGALLGDST R++ Q++++++ + + S Sbjct: 301 FVDAYNKLDTTLRSLTKF-------DETGQANGALLGDSTARSVINQIRAVMNTAINNGS 353 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 S +L QIG++ DGKL LD+ K +A+ + + + +L + T Sbjct: 354 SVNSLTQIGVSFQ-RDGKLSLDSTKFASAVSTNFNDIASLFAASARAT 400 >UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9N2_9ACTO Length = 469 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 115/495 (23%), Positives = 205/495 (41%), Gaps = 57/495 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M S+S G+ SGLD +S++ L AA+ T + Q S+ AY + + + + A Sbjct: 1 MVSLSVDGLVSGLDTTSLVSQLVAAEALPQTRLKAQMSAAQKAADAYRAVNTKVDAVRAA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGK-YTISVTHLAQAQTLTTRTTRDDTKT 119 AL+ L +A + S+ + +A+ A+ G + +V LA + + T T T Sbjct: 61 AEALTADGLAAARTAKSTAASVTASATSTAVPGSRISFTVGSLASTASYLSTATWATTGT 120 Query: 120 AI-----------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSAS 167 + S LTI + D P ID +++L+ IN+ GV A+ Sbjct: 121 DVRKPIGPDATTPGPSPWPLTITRP-DGTPTPIDPPDQDATLAETIAYINDREDLGVRAT 179 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 +N GNG YRL +TS G + SA+ + V A++A L Sbjct: 180 AVNTGNG-YRLQLTSTTPGAKGYFDVQ---------------SAAGDLFTVVSPAKDATL 223 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 V VA+ + +NT +D + + + + + + + + + +D T +K V+A N+ + Sbjct: 224 DVGGVAVTSPTNTFADLMTGVAITVTEESDTSVVVEVGEDLKTVATKVKTLVDAVNAALT 283 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-------- 339 + ++ T DS +SS L GD LR + ++L + +S+ V + Sbjct: 284 SIATNT---------DSGTSSTAVLKGDFALRQLASRLLTKVSDAVPGAVPSASTPGTYT 334 Query: 340 --TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG------ 391 + A +G+ DGK+ D +++ D V L+ G G G Sbjct: 335 AGSPAALGVQL-TRDGKVTFDEATFLKSMQSDPEAVHRLLGGAPASDGAPAVEGLAQRLA 393 Query: 392 -SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + + STTG + G + R+ A+ QF+ ++ ++SL Sbjct: 394 TTAKDATKSTTGTLTLLAQGREALVKDYQSRIADWDLRLAARKEALTRQFSAMETALSSL 453 Query: 451 NSTSSYLTQQFENNS 465 + SS+L Q + S Sbjct: 454 KNQSSWLAGQLGSLS 468 >UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aeromonas RepID=FLID_AERPU Length = 464 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 129/471 (27%), Positives = 226/471 (47%), Gaps = 32/471 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+S G GSG+DL S++ + +A+KA L PI +Q+S LS G LKS+++ F Sbjct: 2 AITSAGAGSGIDLESVISASVSAKKAQLQQPIITKQNSTQITLSGIGQLKSSISAFTDIL 61 Query: 62 TALSKADLFSATST----TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 LS F+ + + A G+Y I V LA+ T D + Sbjct: 62 DKLSAPGAFNKRAINITQSKDDPILKVEGKSGASNGQYNIIVNKLAE--TSRQEGIFDSS 119 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGE 175 T +AT D +LT + G + + A +L IR +IN+ G+S +I+N +G+ Sbjct: 120 TTPLATQDGQLTFKAGDKTFKVDVK---AGDTLQDIRKSINSNGDNFGLSVNIVNTADGK 176 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L + S +G +T++ + A M + AA +A++ V+ ++ Sbjct: 177 AKLVIDSGISGDGKDLTITGDNAELGV------FEAGGGVMSQTRAASSAEINVDGNVLK 230 Query: 236 NSSNTISDALENITLNLNDVTTGNQ-------TLTITQDTSKAQTAIKDWVNAYNSLIDT 288 + +NT D+++++ + + V+ + + IT D + Q ++ +V+ YN+L D Sbjct: 231 SDTNTFDDSIQDLKVTVLRVSDKDSAGDLKANKVDITTDKTSIQELVQQFVDGYNTLQDK 290 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-VSSSSYKTLAQIGIT 347 +SL K G GAL GDST R I++ + ++L + +S +Y T+ +IGI Sbjct: 291 MNSLGKRNTFVGGVKQDDG--GALAGDSTTRAIESFMSNLLVSPSQNSGTYSTVFEIGIK 348 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 D GKL LD K A+ K+ V AL G + G+ +T+ S L + + G++ Sbjct: 349 MDNK-GKLSLDKTKFGEAVDKNFDQVVALFGG---EKGLASTLNSGLKEYTKSGGMLAQR 404 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 D ++ L LT+ A+ ++ A + Q+ LD L+ +NS++S L Sbjct: 405 EDVLNSDLRALTQKTATANAQLTKYEAALRAQYGSLDALLVKMNSSASALA 455 >UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEJ5_9BURK Length = 472 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 146/478 (30%), Positives = 246/478 (51%), Gaps = 22/478 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD++SI+ L+A +K L + + ++ +LS G ++S ++T +A + Sbjct: 2 AISSTGLGSGLDVTSIISQLSALEKQPLKSLQTKATTLQTQLSTVGVIQSQVSTLASAAS 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + T+ TSS T A SAT A A Y+I V+ LA+AQ+L TT T Sbjct: 62 KLGSVLSWKGTTATSSNTSAVSATAGTGAAAASYSIEVSKLAKAQSLALPTTVGSTALPA 121 Query: 122 AT---SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYR 177 AT L+IQ G + ++I+I+ +L+ I IN + GV+AS+I+ G+G+ Sbjct: 122 ATDQLGYGTLSIQVGSNA-AVSINIADGEGTLAQIAAKINGVSGLGVAASVISDGSGKVN 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-----ASSNGMEVSVAAQNAQLTVNNV 232 L + + +TG D A T++ + + + S + M + A QNA+ T+N V Sbjct: 181 LMLRATNTGSDGAFTVTATEGTGGSVSVPSNLSRLSYTTGNFAMAQNQAPQNAEATINGV 240 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 A+ +S NT+++ ++ + L L+ VTT +T+ +DT+ I+D++ AYN+L T + Sbjct: 241 AVSSSKNTLTNVVDGLNLTLSQVTTTAVDVTVAKDTAGMTKTIQDFIGAYNALNQTLNDA 300 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-SNTVSSSSYKTLAQIGITTDPS 351 T Y D+ + + GAL GDS +Q L+S++ + + + S++ LA IGI+ Sbjct: 301 TAY-------DAATKTAGALQGDSVATGLQRALRSLVGATSSTGSTFSRLADIGISA-KL 352 Query: 352 DGKLELDADKLTAALKK--DASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 G LEL++ KLT+A + + G G I L+ TG + T+ Sbjct: 353 GGDLELNSTKLTSAFSDVSNLQLLFTNFGGSDASNGFGLRIKDFANGLLAATGTVTNKTN 412 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 V K ++ + + + R R K Q+ LD M SL + +SY++QQ + S Sbjct: 413 AVKKAIDLNSTEQTKVNTRASNLETRLKAQYAALDTKMASLTALNSYVSQQVTTWNKS 470 >UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGE2_RHOM4 Length = 500 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 95/490 (19%), Positives = 195/490 (39%), Gaps = 53/490 (10%) Query: 16 SSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL--FSAT 73 ++ ++ + + + +++ S L+ + L+ F Sbjct: 17 EQLISAIISIESQPKLELQAKKAEQERLKGVVKDFDSKLSALHSLLKTLTDPLARPFQGK 76 Query: 74 STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT------AIATSDSK 127 S T+S T F+ + +A G +T+ V LA A T ++ + Sbjct: 77 SATTSATEFTVSAGDSAALGTHTLEVKRLASADTRISKQYTSSGSSLRSFFDTNGAQTFT 136 Query: 128 LTIQQGGDKDP-----ITIDISAANSS----LSGIRDAINNA------------KAGVSA 166 + + D DP I + ++ ++ L+ I AIN+A A Sbjct: 137 IRVASPTDTDPNNRLDIQVTVNPTGTTDEEILNEIATAINDAFQAAVDAGTIKSDERAYA 196 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN---------GME 217 S+IN + RLS+ S TG + SG L + +S G Sbjct: 197 SVINETSSTARLSLRSGKTGFTYRLEFVDSGAGLLSELELSNNVVASGTGGGQVKYVGTS 256 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 + + N+Q ++ + + +N ++DAL +TL L ++T TIT +++ + ++D Sbjct: 257 ETDSELNSQFVLDGLTLYRDANRVTDALAGVTLELKQISTSPADFTITPNSNGIKAKVED 316 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS- 336 ++ YN ++ Y A + D ++ + G GD ++ L++ + VS Sbjct: 317 FIKKYNDVL-------LYLAGKSNVDGETETRGDFAGDPVFSGLRFTLRNEVVRKVSGQP 369 Query: 337 --SYKTLAQIGITTDPSDGKLEL-DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 + +GIT + +DG L L DADKL A++++ V +L G GI T + ++ Sbjct: 370 TEGPHYITDLGITIN-NDGTLTLSDADKLIQAVERNPQAVESLFSG---SDGIATRLLTH 425 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + +++ T GII D + ++ +L +++ + + + QF ++ + Sbjct: 426 VETFVKTGGIIDQREDSLEASIRRLDDRIADFEEQLARREEQLRAQFARVQETIALFQGQ 485 Query: 454 SSYLTQQFEN 463 +L+ Sbjct: 486 QQFLSGFLYG 495 >UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 Tax=Thermoanaerobacterales RepID=B0K3A2_THEPX Length = 519 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 122/507 (24%), Positives = 206/507 (40%), Gaps = 56/507 (11%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANT 62 + G+ +GLD SI+ L A L + Q+ + + + S L + + Sbjct: 15 LRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVF 74 Query: 63 ALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTT---------RT 112 L F A + TSS + +AT NA+ G YTISV+ LAQA T + + Sbjct: 75 KLKLQGTFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNS 134 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIIN 170 T A+ + S +T+ G I +++ I AIN + GVSA+ Sbjct: 135 DGTYTYNALNNTGSDITLYLKGLDGNDKEIIIKNGATIKDIVAAINAKTNETGVSATY-- 192 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS-VAAQNAQLTV 229 G RL + SN TG ++ + S + D Q+F+ S ++ + Q+A T Sbjct: 193 -DPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTGGITGQDALFTF 251 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N V + +S+N ++ + I + L + TLT+ D K IK +V++YN +I Sbjct: 252 NGVQMTSSTNNVT--VAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKI 309 Query: 290 S-----------------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 + D + + +G L D TL + +++++S+T Sbjct: 310 NAKLTEKRYYDYPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSST 369 Query: 333 VSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVG----------- 379 VS +L+ IGITT GKL +D KL A+ D V + G Sbjct: 370 VSGVG--SLSSIGITTGQWYEGGKLYIDETKLKDAIANDLDKVMKIFAGVYETDSNGNTT 427 Query: 380 ---DGKKTGITTTIGSNLTSWLSTTGIIKAATDG--VSKTLNKLTKDYNAASDRIDAQVA 434 G + T+ + + G D + + ++ ++ Sbjct: 428 LKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQRYLNDLEK 487 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQF 461 RY QFTQL++ + +NS S++L+QQ Sbjct: 488 RYYAQFTQLEMYVGQMNSQSAWLSQQI 514 >UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRA7_CHRVO Length = 456 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 125/478 (26%), Positives = 219/478 (45%), Gaps = 36/478 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S LD+ I+ L A ++ L + + +LS G L S+L+ QTA Sbjct: 1 MAAITSS--VGALDVQGIVSQLMAIERRPLNESQQRADQYNTQLSTVGKLSSSLSALQTA 58 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT-- 117 T LS +T S + + +T +G Y I V +LA ++ L T Sbjct: 59 LTGLSSGRFLQVFKATVSDASMGAVSTTSGGSSGTYQIDVKNLATSRQLVFDQVGTSTIT 118 Query: 118 --KTAIATSDSKLTIQQGGDKDPITIDISAAN-SSLSGIRDAINNAKAGVSASIINVGNG 174 K AI+ + ++ Q G +T+ + SL I D IN A G++AS++ G+ Sbjct: 119 DPKAAISGAPDSISFQVNGKTQTVTLRSKPDDVVSLQTINDKINAAGIGINASVVQNGS- 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA----SASSNGMEVSVAAQNAQLTVN 230 +Y+L + S ++GLDN + + + S S S A NA LTVN Sbjct: 178 QYKLVLGSVESGLDNQFKIVAGSNSSDSGGTSGSTLAGLSQSPTAGTESRDASNASLTVN 237 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 VAI SN ++ A+ + ++L G+ T++++ D++ ++ +V+AYN +I Sbjct: 238 GVAISAGSNKVTSAVAGVEIDLYKA--GSFTVSLSPDSAGVAKNLQSFVDAYNQVIG--- 292 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLAQIGI 346 D +++ +GAL G++++ IQ +L+ +L+ V+ +S L+Q GI Sbjct: 293 ------------DVKAARSGALKGNASILDIQGKLQQVLATPVAGVDPVNSIAYLSQAGI 340 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 + DG L+LD A+KKD V L G+ TG + L G+I+ Sbjct: 341 SLQ-KDGTLKLDQTAFNDAMKKDKQAVVNLF-GNASNTGFAQRFNLEINGMLDPKGVIET 398 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + + ++ T+ ++ R+D + A+ Q+T L+ + + S SS L + Sbjct: 399 SKATIRTKVSTETQLQSSLQSRLDTKQAQLIRQYTALNKTLAEMQSGSSSLFNLISSK 456 >UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A1RF91_SHESW Length = 448 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 118/471 (25%), Positives = 211/471 (44%), Gaps = 48/471 (10%) Query: 11 SGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 SG++ + L A +A T + ++ +L AY L++ + T + L Sbjct: 3 SGMNAAQFAQQLIGADRAGKDTLYKGKLTASKTQLDAYTLLENNMKKMATKLSELGGDAA 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 S +T + A +AT +A G Y +SV LAQA LT ++ + + ++ Sbjct: 63 KSKIATVTGENA-TATVKSDAPKGNYDLSVHKLAQAHQLTKAY---SSENELLPTSGVIS 118 Query: 130 IQQGGDKDP-ITIDISAANS----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTS 182 IQ G D + ID++ N S+S +RD IN GV AS++ GN + ++S Sbjct: 119 IQVGSDPTKRMEIDLATVNGGAAISVSQLRDLINKQAGNPGVQASLVRTGN-QIEFMLSS 177 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 ++G+ N M + +G D GM AQ+A+LT+N + I +SSN + Sbjct: 178 KESGVANQMKVEFNGADW--------------GMTERRVAQDAELTLNGINITSSSNYLE 223 Query: 243 DALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + ++ ++L L V ++ + +T D + A+KD+V+++NSL+ + LT+ V Sbjct: 224 NVVDGVSLELVKVHAAGESSMIKVTDDFEANKKAVKDFVDSFNSLMTQINQLTRSMGVKT 283 Query: 301 GADSQSSSN-------------GALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 S + G L GD+++R +Q++L+ + T ++ L+ IGI Sbjct: 284 SDSGTSDKDKEDKTTAVSEAQIGVLKGDTSIRLLQSRLRDSVFATAANG--MRLSDIGIE 341 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 DGKL++D KLT + K D V A+ G +I L + G I Sbjct: 342 I-GRDGKLKIDDAKLTDSFKSDPEKVQAMFTG---PDSYVKSIEKTLKPFTQFNGYIDQK 397 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + ++K + + +++ + Y QFT ++ + NS S + Sbjct: 398 QEALNKQIKSVNDSMARHDYQMNQKYQIYLAQFTAMESTINQFNSASQLFS 448 >UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HZ3_DECAR Length = 452 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 156/482 (32%), Positives = 254/482 (52%), Gaps = 49/482 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+SLG GSGLDL S++ L + +KA L ++ ++S+ K+SA+GTL S L+ QTA Sbjct: 1 MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTA 60 Query: 61 NTALSKA-------DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT 113 AL + ++T + T+ SAT A+AG YT++VT LA + + T Sbjct: 61 AQALKANIGQTALQKFATYSTTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTV 120 Query: 114 RDDTKTAIATSDSKLTI-----QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T I T+ LT G+ TI + ++N+SL+G+R++IN A G++A+I Sbjct: 121 TS-TSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNSLTGLRNSINGANMGITATI 179 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 I G+ +L +T GLDN +TL ++ + + A +A T Sbjct: 180 I-TGSAGAQLVLTGEQ-GLDNKITL---------------GGNLASQLTQTATADSAAFT 222 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD-TSKAQTAIKDWVNAYNSLID 287 VN +A +++N S ++ +TLNL TG+ TLT+ + +S TA+ ++ AYN Sbjct: 223 VNGIAATSNTNAASKVIDGVTLNLTK--TGSTTLTVAAEYSSNLSTALNSFIKAYNDANS 280 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML--SNTVSSSSYKTLAQIG 345 T +++ Y ++ + GAL G+S L+ + Q +S++ + +S+Y+ L+ IG Sbjct: 281 TMATMGAY-------NATTKVAGALQGNSLLQDARQQTRSLVFGTTVGGTSAYQRLSDIG 333 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 ++ +DG L LD KL AL D V L+ + + + L + TTG IK Sbjct: 334 VSV-GTDGSLSLDTTKLNKALASDTVSVATLV------DKVGSAFNTTLEQVVGTTGKIK 386 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 ATD + + +L K +A +D ARY+++FT +D L+ LNSTS+YLT Q N + Sbjct: 387 IATDSANSMIKELQKREDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYLTTQLANLT 446 Query: 466 NS 467 +S Sbjct: 447 SS 448 >UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I428_VIBHO Length = 520 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 114/530 (21%), Positives = 230/530 (43%), Gaps = 89/530 (16%) Query: 7 LGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G+GSG+D +++ ++ AA++A + ++ Q+ TA++ A ++ AL +F+ L+ Sbjct: 4 TGLGSGIDYEAMIQAIVAAERAPVENQLNRQEGMNTAEMDALKEIQGALNSFRNTVEDLN 63 Query: 66 KADLFSA-TSTTSSTTAFSATTAGNAIA-----------------------GKY------ 95 + + S+T +G A++ G Y Sbjct: 64 AYTELNKLKAELSNTDVMGVAVSGGAVSGEYNFDVTQLAQAARDKVLTMKKGSYLTTGKV 123 Query: 96 -------TISVTHLAQAQTLTTRTTR------DDTKTAIAT------------------- 123 T+SV A A L T+ DT T +A Sbjct: 124 EFTTDKGTVSVDIAALATELKTKEESKKAQYRTDTLTEVAKEHNIDTSEDGWEAKAEAKL 183 Query: 124 ---SDSKLTIQQGGDKDPITI-DISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYR 177 ++K + + I + ++ AIN + G +++ G+ + Sbjct: 184 AEDQEAKASFDARIKEYDQNIARYDEKGVTAEELQSAINRHENADGAKVTLVQTGD-QLT 242 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 + + + DTG+ NA+ + + G D + S G+ + AAQ+A + N+ + + Sbjct: 243 MVLNAKDTGVANAVKGLSVTNVTAKDDNGSDVAVSDLGVPL-QAAQDAVVKFGNMELTSP 301 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 +N + + ++ ITL L + TG + I +D + +K ++++YN +++T ++ TK Sbjct: 302 TNKMENVIDGITLTLKE--TGTVNVNIQRDEDGVKETVKTFIDSYNKVVETVNTYTK--- 356 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 S AL GD+ R++ ++L+S++S+ +SS+ TL+Q+GITT DG LEL Sbjct: 357 ------SSEEMAAALSGDAATRSMISRLRSVISDQYASSTLGTLSQLGITT-KMDGTLEL 409 Query: 358 DADKLTAALKKDASGVGALIVGD------GKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 ++DK A++ + + L +GD K+TGI ++ + L + G+ D + Sbjct: 410 ESDKFDKAMEDNFDEIAKLFMGDPASSVPEKQTGIMGSMLTVLDDYHKNGGLFDVRIDRL 469 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 +L ++ A R++A+ ++ + ++D + +N T S L Sbjct: 470 DADNQRLQEEREALDARMEAKALSLRDYYAKMDSQIAQMNQTQSMLISML 519 >UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF31_PETMO Length = 502 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 104/500 (20%), Positives = 203/500 (40%), Gaps = 40/500 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + + G SG+D +++ L ++ L + ++ T K + + + + L F Sbjct: 7 VGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDY 66 Query: 61 NTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 K++L ++T+S + +AT +A + + V LA L K Sbjct: 67 LITFKLKSNLIPKSATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKK 126 Query: 120 A-------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 + T DS TI +G + D IT+ + + ++ + D IN + GV A + Sbjct: 127 SSTIGDVIGTTGDSTFTITKGTNSDTITV---SDSETIQNLIDKINASILGVEAK-FDDA 182 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQN---AQLTV 229 NG++ + N + + S S + L + + + +A+++ + + +L+ Sbjct: 183 NGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVELSF 242 Query: 230 NNVAIENSSNTISD---ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 + + + +++ + T++L ++G ++I QD K+ +IK++V+ YN I Sbjct: 243 DGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNETI 302 Query: 287 DTFSSLTKYTAVDAGADSQSSS----NGALLGDSTLRTIQTQLKSMLSNTV----SSSSY 338 L V + + G L GD+ L I L++M+ + V S S Y Sbjct: 303 TYVYDLLHEDQVTDKPTEEMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGSQY 362 Query: 339 KTLAQIGITT--------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT---GIT 387 L IGIT+ + G L +D DKL AL +A V L + G Sbjct: 363 NALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNTNAEDVWKLFATNDTTNKEYGYA 422 Query: 388 TTIGSNLTSWLSTTGIIKA---ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 ++ + L G I + + +L + DR+ + A+Y QF+ ++ Sbjct: 423 QSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSAME 482 Query: 445 VLMTSLNSTSSYLTQQFENN 464 + LN+ Y+ F N Sbjct: 483 QAIQQLNAQGLYIQNAFSNQ 502 >UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W113_9BACI Length = 513 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 106/522 (20%), Positives = 200/522 (38%), Gaps = 68/522 (13%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--TA 60 + G SG+D++ ++ L A++ + + Q ++ Y + F+ T Sbjct: 2 DMRMTGFASGMDINQMVSDLMRAERQPMERMEQNQQELILQMDKYREVNREFMQFRDNTF 61 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT---------- 110 ++ L ++++ + + +S+ A SAT + A G YT LA + T + Sbjct: 62 DSVLRRSNMTAQNAVSSNENAVSATASAGAAQGTYTFEDVSLASSTTNVSTERIGVDGAD 121 Query: 111 -----RTTRDDTKTAIATSDSKLTIQQ---GGDKDPITIDISAANSSLSGIRDAINNAKA 162 D + I G+ + +++LS + INN++ Sbjct: 122 YTATLDEVFGDELAMNNDGEVVFDITTYGPDGEAINGSFSFDPESATLSEVFAEINNSEL 181 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 G+ A G R+S+T G A + + + NG EVS Sbjct: 182 GIQAYFDTDGG---RISLTRTTEG---AFNPDDGPEIDFNDSAFLTDNLALNGDEVS--G 233 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLND-VTTGNQTLTITQDTSKAQTAIKDWVNA 281 +NA T+N +A+E SSN+ + ++ + +NLN + G T+ + DT + I ++V+ Sbjct: 234 ENASFTMNGLAMERSSNSFN--IDGLQVNLNSNMENGQATVRVNTDTDQIMETITNFVDE 291 Query: 282 YNSLIDTFSS-----------------LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 YN +I + + ++ + +G L DST+ + Q Sbjct: 292 YNEMIGGMDDTVSEEYYRDYAPLTEEQMQAMEEREIEMWNERAESGLLRRDSTINSALNQ 351 Query: 325 LKSMLSNTVSSS----SYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALI 377 + N V + ++ L +IGITT G+LE+D +L A++ D+ V L Sbjct: 352 FRMDFYNPVDAGMDNQTFSQLTEIGITTSSDFQDRGRLEIDETQLRNAIESDSESVYQLF 411 Query: 378 VGDGKKT-----GITTTIGSNLTSWLSTTGIIKAATDG--------VSKTLNKLTKDYNA 424 DG+ GI + ++ + G TD + + L ++ + Sbjct: 412 AADGEDENQDQRGIARRLRDTASNAIEQIGNRVGRTDSPGSIQSSTLGRELLQVEDQMSN 471 Query: 425 ASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 R+ RY QFT ++ M N+ + L Q Sbjct: 472 FERRMQQVEERYWSQFTAMEQAMAQANAQAEQLMSQLGGLQQ 513 >UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SEQ5_NOCSJ Length = 443 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 119/468 (25%), Positives = 213/468 (45%), Gaps = 36/468 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ S G+ SGLD +SI++ L + + +QQ+ + A L + + Sbjct: 1 MATSSISGLASGLDTASIINQLMQLEAVPQNKLRDQQTVENNVIRALRQLNTDAALLASN 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+K + + TS+++ +A+ +A +T+ V +A++ + Sbjct: 61 AAKLAKPEAWQTLKATSTSSTVTASATASASPSSFTVVVGQVAKSAQTSYSADVALDANV 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 + + + + D T I+A +L+ + IN AKAGV+A+ + G YRL + Sbjct: 121 LTVAGDPVVLTA---ADGTTHTINAGTGTLTDLAAGINAAKAGVTATTVRTGTNTYRLLL 177 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 T++ TG +A++L S S G + Q+AQLT+ + + +NT Sbjct: 178 TADTTGAGSAISL----------------SNVSLGTATTDLGQDAQLTIGGIPASSKTNT 221 Query: 241 ISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 +D + +++ L T+++ QD+S ++++K V+ NSL+ + Sbjct: 222 FTDLVPGVSVTLASTAKNGDTSTISVAQDSSSVKSSVKALVDQVNSLLTSI-------DT 274 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 + +++ G L GDST R+ L+S L NTV +LAQ GI TD GKL D Sbjct: 275 QTATKTSTTAAGILAGDSTARS----LRSALLNTVFGDGTTSLAQYGIQTD-RYGKLVFD 329 Query: 359 ADKLTAALKKDASGVGALIVG--DGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTL 415 ADK A D +GV A G + S + + TG I +A G + T+ Sbjct: 330 ADKFATAYAADPAGVAAKFTSATPPATDGWAARVDSVAKAATDSYTGTITSAITGHTTTV 389 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++LTK DR++ + A + +T L+ +++L S ++L Q + Sbjct: 390 DRLTKSIADWDDRLEIRRASLQRTYTALETALSNLQSQGNWLAGQIAS 437 >UniRef50_C0GJK0 Flagellar hook-associated 2 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJK0_9FIRM Length = 542 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 99/555 (17%), Positives = 198/555 (35%), Gaps = 108/555 (19%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+++ G+ SG D I+ L ++ + Q+ + + Y + + + +F+ Sbjct: 1 MSTLRIGGIASGFDTEQIIRDLMRVERMKVDRTFQQRQTLQWQKEQYREMTNKVRSFRDQ 60 Query: 61 N-------TALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT 112 T L+ A S TSS S + A G+ T V A A Sbjct: 61 YFDILKPETNLTSASAMKKMSATSSMPGIVSVSAGAIAFQGESTFQVLQSATAAKAIANE 120 Query: 113 TRD-----------------DTKTAIATSDSKLTIQQGG---DKDPITIDISAANSSLSG 152 +K A + L + G + + I+IS ++ + Sbjct: 121 VTAGHEEGMRLSMTDTMATISSKLGEAAGEGVLNFEDGRFSLTINDVEIEISESD-TFGS 179 Query: 153 IRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 + INN+ AGV S + ++T+ +TG + ++ S +G +A Sbjct: 180 VLQRINNSNAGVQVSYSTFSD---TFTMTARETGAGH---ITTDDGGNFFSALGLVPNAE 233 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT---------LT 263 EV + ++A +N ++N+ + ++ IT ++N + Sbjct: 234 G---EVGQSGRDAVFRINGFEGTRTTNSFT--IDGITYSINQQVDPPVDPEAPLETIRIN 288 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFS------------SLTK-----YTAVDAGADSQS 306 ++ DT I+ +++ YN LID S LT + + + Sbjct: 289 VSVDTDAIFNTIEKFISDYNQLIDDISGKLNEERFRGFPPLTDEQKEAMSDREIELWEEK 348 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS---DGKLELDA--DK 361 + +G L DS L + ++S L + V L+ IGI T + +GKL L + Sbjct: 349 AQSGLLRRDSALENMLRNMRSALYDMVGEG---HLSSIGIETSRNYLDNGKLVLKNGGND 405 Query: 362 LTAALKKDASGVGALIVGDGK-----------------KTGITTTIGSNLTSWLSTT--- 401 L AA+ ++ V L ++G+ + L + TT Sbjct: 406 LRAAIAENPDSVVDLFARRSDISYSPNLSAEDRSQRYQESGLAHRLSDILQDNIRTTRNS 465 Query: 402 -----------GIIKAATD---GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 GI+ T+ + ++ + + ++ + + +Y +FT ++ + Sbjct: 466 NGRKGVLLERAGIVGDTTEFDNYYDNQIKQVNRQIDRINEMLQRREEQYYRRFTAMEKAL 525 Query: 448 TSLNSTSSYLTQQFE 462 L+S +L Q + Sbjct: 526 QQLHSQGDWLMMQLQ 540 >UniRef50_B0TH38 Flagellar hook-associated protein 2 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH38_HELMI Length = 526 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 105/531 (19%), Positives = 200/531 (37%), Gaps = 82/531 (15%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++ G+ SG+D+ +++ + I ++ + + L S L F+ A Sbjct: 2 TMRIGGLASGMDIDAMVKEMMKGHVVRRDQIYQKKVQTEWRQTEIIDLNSQLRDFRDAIF 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAG-KYTISVTHLAQAQTLTTRTTRDDTKTA- 120 L ++ S S TS + TA A + + V LAQ T + T A Sbjct: 62 KLKLSNSTSPKSVTSGNSIAVTATATADAANTSHMVKVKSLAQGVTKGSEAAISATANAN 121 Query: 121 --------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 TS T++ G + I++D N S+ + IN A AGV A N Sbjct: 122 KNALKTHLGLTSTDVFTMKLNGKE--ISVDP---NKSIYEWVNNINKAGAGVKA---NYD 173 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG---------------YDASASSNGME 217 R+ + + + G + + + D Q +G + + + + Sbjct: 174 VNLDRVFLYTTEQGPTTKIDFTGTTDAQAQEMIGKLKLGASPTDNWSLDVNGDGTPDNVG 233 Query: 218 VSVAAQNAQLTVNNVAIEN-SSNTISDALENITLNLNDVTTGN----QTLTITQDTSKAQ 272 A++ ++ + N S NT++ + + + T G TL ++ D Sbjct: 234 YKWVGTAAEVEIDGITYSNLSKNTLT--VAGVVYSFLQKTEGTAEPIVTLQVSPDLEGTV 291 Query: 273 TAIKDWVNAYNSLIDTFSSLTKYTAV-----------------DAGADSQSSSNGALLGD 315 +KD+V+ YN +++ + K + + + +G L + Sbjct: 292 KTVKDFVDKYNEMLNKLNGELKEKTYRDFLPLTDEQKRAMKENEIKLWEEKAKSGLLRNE 351 Query: 316 STLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD--PSDGKLELDADKLTAALKKDAS 371 S+LR + +Q++ +S+ + YK+L+ IGITT GKL L+ D L AL ++ Sbjct: 352 SSLRNLVSQMRFAVSDAIGELKGKYKSLSSIGITTGLYSEGGKLYLNEDVLLKALTENPD 411 Query: 372 GVGALIVG---------------DGKKTGITTTIGSNLTSWLSTTGIIKAATDG------ 410 V L D ++G+ + L + + G Sbjct: 412 VVSELFGTTVTKADPSNPENKINDLSRSGVAVRLYDRLKEAMDKMRVRAGTLPGADDMSD 471 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + K L + K + +R+ +Y QF+ L+ + N+ S++L+QQF Sbjct: 472 LGKQLRRYNKQLDDMEERMHRLENQYYRQFSALETALQRANAQSAWLSQQF 522 >UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30U48_SULDN Length = 462 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 117/478 (24%), Positives = 211/478 (44%), Gaps = 32/478 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 ++ISSLG+GSG+ + ++D L A + + P+ N+ + K AY L S + TF+ + Sbjct: 3 SNISSLGIGSGVLTADVIDQLKEADTSRIVKPLENKITLNNQKQDAYKLLDSLMKTFKAS 62 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +ALS +F + S SS A + +++ LA+ + T Sbjct: 63 ASALSYDTIFDSKSVKSSGKA-EVKVDAGSTVESFSLETVALAKKDITKFGSVATPAST- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IA+ L I T +SA S++ I A + VSAS++ GNG Y L + Sbjct: 121 IASGAGVLKINNFEIPYDGTTTLSALAQSITEI------AGSSVSASVLQTGNGSYNLVL 174 Query: 181 TSNDTGLDNAMTLSVSGDDALQS-------FMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +S TG A+++S + D + F Y+A + NG E A +A N +A Sbjct: 175 SSKSTGASQAISVSDTDDGTAGAGSLNAALFDPYNAITNPNGYEKVQTASDATFKYNGIA 234 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 + ++N +SD + + + L + + I+QD++ +K + ++YN+LI +T Sbjct: 235 MTRATNEVSDLILGVNIKLKQEGDFSL-VDISQDSTAISDELKLFTDSYNALIANLHDMT 293 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 D + + G G+S +++I L +++ +++ +L GI D G Sbjct: 294 -------LKDEATGAEGIFNGNSFVKSISRDLTRTITSLNTNN--NSLINYGIDID-RSG 343 Query: 354 KLELDADKLTAALKKDASGVGALIVGD-----GKKTGITTTIGSNLTSWLSTTGIIKAAT 408 K+ + L LK+D V G K TG TT+ L S+ ++ Sbjct: 344 KMSFNKATLETKLKEDPDAVKLFFTGGTNSEGNKVTGFFTTVDEKLKSYTGYGNLLSNFE 403 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L+K++ AA +D + ++FT D +++ +NS S L + +N Sbjct: 404 TDLKNEGKSLSKNHAAAKASLDTRYEIMAKRFTAYDGMISRINSQFSSLQMMIDAEAN 461 >UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRZ4_TERTT Length = 693 Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 113/430 (26%), Positives = 204/430 (47%), Gaps = 37/430 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D ++ LT ++A I +++ +++S +G L SAL T Q A Sbjct: 7 IQSLGAGSGIDTKNLTKQLTEIERAAPQNRIDSKRDKAESQISDFGLLSSALATLQDAAK 66 Query: 63 ALSKAD-LFSATSTTSSTTAFSATT-AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ D +FS T++ + +TA T G Y +V +A +Q+LT+ + D T Sbjct: 67 VLTDPDGMFSKTASYTESTALVPTGLDTTVQPGSYNFTVEDIAASQSLTSLSFSDPTD-- 124 Query: 121 IATSDSKLTIQQGG-------------------DKDPITIDISAANSSLSGIRDAINNAK 161 A + LT + G D + + I I + N+SL G+RDAIN+A Sbjct: 125 -AVGEGVLTFRFGNVAVDGAGAMLGTNGFTPDLDTEEVQITIDSENNSLEGLRDAINDAD 183 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSG------DDALQSFMGYDASASSNG 215 GV A+I+N G Y L +T+ ++G++N + +S + D+ + + +++ Sbjct: 184 FGVQATIVNDGLNGYVLQITA-ESGVNNQLEISAAESGGTPTDNDNTGLSRFTFNETASQ 242 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTA 274 + A +A LT+N + I SNTI D +E +++++ G+ T+T++ D + A+ Sbjct: 243 LTQLQAGADAHLTLNGLNIYRESNTIDDIVEGLSMDVLQAAPGDKVTITVSDDKAFAEQN 302 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 I+ +V AYN +D T + G+L D+ +++ +Q+++ +++ V Sbjct: 303 IRAFVEAYNLFLDAVKPAMGITDQENDEGESVKVTGSLANDALAKSMMSQIRTTIASAVP 362 Query: 335 S---SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 +S+ +L IGI T+ DG + +D + + K+ V L T I Sbjct: 363 GIGDASFSSLGAIGIRTE-LDGTMSIDEETFGKTMDKNFEDVQKLFAPANNTTDSQIFIN 421 Query: 392 SNLTSWLSTT 401 S+ S Sbjct: 422 SSNARTASGD 431 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 89/222 (40%), Gaps = 12/222 (5%) Query: 249 TLNLNDVTTGNQTL--TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQS 306 T+++N V++G TL + + A++ +N+ ++L +S+T D + Sbjct: 467 TVDVNGVSSGTLTLAPDVYASQDEMALALQSLINSDSTLAAANASVTVSYDADNNRFEFT 526 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 S+ + ++ T L + L +V++ + T + + G + L +L Sbjct: 527 STKYGASSNVSITTASADLTTDLGLSVATGTAGTTVAGTVNGVAAFGS----GNVLLPSL 582 Query: 367 KKDASGVGALIVGDGKK------TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 + G+G +I + G + + +L + G+I + +L L Sbjct: 583 GQPGEGLGLIIGENATSATVSFSRGFAGELEDLIDGFLGSKGLIATRETNLEASLEDLDD 642 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 D A R+ A R QF ++ ++ LN++ ++ + Sbjct: 643 DQEALDRRMTAYEERLMNQFIAMERILNGLNTSGGFIENLID 684 >UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5Y9_9LACT Length = 496 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 135/505 (26%), Positives = 227/505 (44%), Gaps = 58/505 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ LG SG+D S+ +D++ A+ + +N+QSS TA+ +A+ + + L + T Sbjct: 3 GSINFLGSYSGID-SATIDAMIEAESGKVVQYTNKQSSITAEKNAWKDINTRLDSLFTKL 61 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + F + S TSS T + T +++A Y+I V LA + +T+ Sbjct: 62 GTLGEDKTFKSKSATSSDATKVAITAGTDSLASDYSIEVNRLATSNKVTSGEIPLAEGAT 121 Query: 121 IATS---DSKLTIQQGGDKDPIT--------IDIS-AANSSLSGIRDAINNA--KAGVSA 166 I S T+ P+ DIS A SL I IN ++G+ A Sbjct: 122 IKGSLKLSGTFTLTSQATSGPVEEKEASIGKFDISIEAKDSLKDIVGKINEKTKESGIQA 181 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM-----EVSVA 221 I++ R+ +T + G T++ G+ +S + D S + + + Sbjct: 182 KIVDN-----RIIMTDSKMGER---TMTFGGNLTDESGIAIDNSDMAKALGFEKDKAYEG 233 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWV 279 Q+A+LTV+ + + +SNTI+DA+E +T++L VT T+ I +DT A + +V Sbjct: 234 GQSAELTVDGIKVTRNSNTITDAVEGLTIDLKGVTEASKPVTIGIKEDTDTTVKAFQSFV 293 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-- 337 + YNS + A + + GAL GDS+L +Q+ L+S+++ +VSS + Sbjct: 294 DQYNSTLTFVGDQLDVGDPSA----EKNKTGALAGDSSLIRLQSSLRSLMTQSVSSGNPA 349 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI-------------------V 378 YK L IGI+ D G LD KL AL D + V ++ V Sbjct: 350 YKNLEAIGISVD-RFGAATLDTAKLKTALADDPTAVKKMLFQTTTTETPGVDENGAPTTV 408 Query: 379 GDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 K+ G+ + + + +++ TGII + K +TK ++R+ + Y Sbjct: 409 KTEKEVGMAQKMRALVDTYISDKTGIIVTKSATYDKLSEDITKSIAKFNERLVKKRENYV 468 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFE 462 FT+LD M S +YL QF Sbjct: 469 AMFTRLDTAMMQAESQMAYLQSQFS 493 >UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTZ6_9BURK Length = 549 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 122/403 (30%), Positives = 194/403 (48%), Gaps = 35/403 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M ISS G+GSGLD+ I+ SL AA++ LT +S ++++ K+S YG +K++ + A Sbjct: 1 MVGISSAGIGSGLDIEGIISSLMAAERIPLTKVSQERTAINTKISIYGIIKNSFADLKAA 60 Query: 61 NTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + + +T+S SA+ + G Y+I V+ LA+AQ++ + T Sbjct: 61 ADKLSSLNNLNPLKATSSDEKIVSASASAAGAKGSYSIEVSQLAKAQSVAAQGVATADTT 120 Query: 120 AIATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 S T DK P+TI+I +L GI+ AIN++ AGV+ASI+N Sbjct: 121 VGTGSLTITLGSYDSGTNTFTNNADKTPVTINIGTGQQTLDGIKQAINDSDAGVTASIVN 180 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASA---SSNGMEVSVA 221 G G RL +TS +TG N L V+ D S + YD +A + + Sbjct: 181 DGAGS-RLVLTSKETGAVNGFKLEVTDADGNNTDTTGLSRLAYDPTAAVGAGKNADTLQV 239 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 AQNA T+NN+ + +SNT++DA+ +TLNL TT L + D + +T + +V A Sbjct: 240 AQNANFTINNLPVSKASNTVTDAVAGLTLNLKAQTTSPVNLEVGLDDTALKTTLDGFVTA 299 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN + Q + L ++T T++ L+++L V+ L Sbjct: 300 YNKIRGNLKD-------------QQQKDATLSRETTPSTLERGLRNILREQVAQYGIG-L 345 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 + IG++ D DG L L+ KL A+ D S + + T Sbjct: 346 SDIGLSFD-KDGVLSLNKTKLDTAVAADPSILEKVFANTATTT 387 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 43/86 (50%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 G+ + + S G + + TDG++ ++L + + R++ RY+ QF+ Sbjct: 464 SKGLAERLSDWIGSLTDEGGTLVSRTDGLTSRKSRLDDQEDRLNLRLEQVEKRYRAQFSA 523 Query: 443 LDVLMTSLNSTSSYLTQQFENNSNSK 468 LD ++ S+ TSSYL+QQ + + Sbjct: 524 LDSMLASMQQTSSYLSQQLAALAQQR 549 >UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IM1_SACD2 Length = 692 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 111/404 (27%), Positives = 211/404 (52%), Gaps = 35/404 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I S+G GSG+D ++++ LT+ +KA I + +K+S +G LKSAL+T + A Sbjct: 7 IQSIGAGSGIDTNNLVKQLTSIEKAAPQNRIDKTRDLTESKISDFGKLKSALSTLKDATK 66 Query: 63 ALSKAD-LFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ + LFS T++ + + A + G YT V +A++Q+L++ + T T Sbjct: 67 TLTDPEGLFSKTASFTESDALVPVELGTDVQTGSYTFEVNAIAKSQSLSSTSFASITDT- 125 Query: 121 IATSDSKLTIQQGG----------------DKDPITIDISAANSSLSGIRDAINNAKAGV 164 + LTI+ G ++D I I I ++N+SLSG+RDAINN+ +G+ Sbjct: 126 --VGEGTLTIRLGAVTTDVNGEMTAFSADVEEDAIEIVIDSSNNSLSGLRDAINNSDSGI 183 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVSG------DDALQSFMGYDASASSNGMEV 218 A+I+N G+G Y+L + + +G N + ++V+ ++ + + + + + Sbjct: 184 QATIVNDGSG-YKLQIKAA-SGAANELEITVAESGGTPTNEDANGLSRFAFNTTVSQLTE 241 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 + Q+A LT+N +AI +N + D +E +TL++ G + +TI+ D + A+ I+D Sbjct: 242 NQGGQDASLTLNGLAITRETNKVEDVVEGLTLDILKAAPGEEINITISDDKAFAEQNIRD 301 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 +V AYN ++ + + V+ ++ G+L DS ++I +Q++S +++++ Sbjct: 302 FVEAYNLFLEVLEPIFGTSEVENDEGETTTVTGSLAKDSLAKSILSQIRSTIASSIPGLG 361 Query: 336 -SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV 378 S + +L +GI T+ DG L +D D ++A + V L Sbjct: 362 NSDFTSLTNVGIRTE-LDGTLSIDEDDFSSAFDTNFEDVQKLFA 404 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 38/73 (52%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + +TS+L+ G+I D + L+ L +D + R+ A R +QF ++ Sbjct: 606 GFAGELDELITSFLTAGGVIDLREDSLESDLDDLDEDQTSLDRRMTAYQERLIQQFISME 665 Query: 445 VLMTSLNSTSSYL 457 ++ SLNS+ S+L Sbjct: 666 RILNSLNSSGSFL 678 >UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNP4_PSEMY Length = 431 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 115/455 (25%), Positives = 210/455 (46%), Gaps = 43/455 (9%) Query: 15 LSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT--ALSKADLFS 71 + S+ L + + L + Q+++ A+LSA TL +AL TF++A + L+ + + Sbjct: 8 VQSMATQLAKYEIQGQLAKANRNQAAYKAQLSALTTLDTALKTFKSAASGLKLAGSSMLV 67 Query: 72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ 131 +++ S SAT A+AG Y V LA L + +D LTI Sbjct: 68 NSASFSQEGYASATVGSKAVAGSYDFFVQQLASKSQLALQGLQDGD-----LGSGTLTIG 122 Query: 132 QGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDN 189 QGGD I + A S+L + AIN A GV A+++ NG+ L +TS TG D Sbjct: 123 QGGDSFEIDL---GAVSTLDELAAAINGAGDNTGVKATLVR-SNGQVNLVLTSEKTGADQ 178 Query: 190 AMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDALE 246 A++LS G+ A Q + G + A++A + + + + ++SNT + ++ Sbjct: 179 AISLSAGGNAAFQGAVA--------GRQELSVARDAIVRLGGETGIELSSTSNTFDNIID 230 Query: 247 NITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 ++L + T+ I QD + + +V+A+N+L+ +F SLT + Sbjct: 231 GVSLTFSKAHKAGDTPLTIEIGQDQKATKEKAQTFVSAFNALMTSFDSLTA-------SG 283 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 +S G L GD+++R I+T L ++ + + +L + GI + +GKL +D + Sbjct: 284 GESGGRGPLAGDASVRAIETMLNQLVRTSFGGA---SLTEFGIVAN-RNGKLTIDNARFE 339 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDY 422 A+ + G L G + T+ NL + S+ G++ D ++ L ++ + + Sbjct: 340 KAVAANPEGFEKLFTDKGN---LLDTLDKNLAVYTSSAGGLLTNRKDTLNTQLRRVDQQF 396 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + + D+ +RY Q+T L M ++ T Sbjct: 397 DNIQKQYDSYYSRYLRQYTGLMQTMAAMEQTYGMF 431 >UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK2_9SPHN Length = 471 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 140/473 (29%), Positives = 241/473 (50%), Gaps = 21/473 (4%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++LG GSG+D SS++ SL +A + I+++QS ++++SA + S+L TF A T Sbjct: 9 LTALGAGSGIDTSSLVSSLVSATRDPKESAITSRQSLNSSRISALASAVSSLDTFADALT 68 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAG--KYTISVTHLAQAQTLTTRTTRDDTKTA 120 + ++ T+ ++ ++ S T + V LA A+ L++ T T ++ Sbjct: 69 EVLSGAAYTGTAASNDSSIASVTLLSGGSPAGLPAQLIVDQLATARVLSSTATAGATGSS 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 A TI + TI I ++N+S +G+ AIN A GV+A ++ NG RL Sbjct: 129 -AVGTGSFTIT-NAAGEATTITIDSSNNSFAGLASAINAAGTGVTARVVTDTNGT-RLVF 185 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDAS-ASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TG N ++S S DD+ G S A S M + A QNA++T++ VA E +SN Sbjct: 186 KG-ETGAANDFSVSTSADDSGSVLAGLGWSGADSATMSSTSAPQNAKITLDGVAYEYASN 244 Query: 240 TISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 T+ A++ + ++LN + G TL++TQ T+ +K++V+AYN+L+ ++ T Sbjct: 245 TVDGAIDYLRIDLNKASPGTTVTLSMTQPTAGLSDLLKEFVSAYNTLMTALNTATA---- 300 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLEL 357 + SSS G L G S +R ++ QL ++ S + S +YKTLA IG+ T+ DG L L Sbjct: 301 ---TGADSSSAGVLNGVSGVRDMKRQLAAITSTPLGSTGTYKTLADIGVATN-RDGTLSL 356 Query: 358 DADKLTAALKKDASGVGALI---VGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 D D L A++ D GV ++ V G+ + + S S G +K A + Sbjct: 357 DTDMLAKAMEADPEGVTNMVNPKVSTAANPGLASLMDSVRDSIEKDDGPLKLAQERYGAL 416 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 T+ + D++ + + ++ +++L +T SYL QQ + +NS Sbjct: 417 AEDFTEQLSKLDDQMTNYQEHLTKVYAAMETRLSALKATQSYLEQQIKVWNNS 469 >UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3D8_WIGBR Length = 505 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 110/509 (21%), Positives = 204/509 (40%), Gaps = 47/509 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS LG+ S + ++ + + + I ++ + K+S++G + L Sbjct: 1 MNEISMLGISSQGATAELIKKIEEIETHKINNIKLKEDKISYKISSWGKINFLLQNLSDK 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + +S F A N G + I V LA+ L+ + + Sbjct: 61 LNNLGEKSFSFLK--SSDNECFKAV--SNDFYGSHKIKVIQLAKKHVLSLSVPKSMNEIL 116 Query: 121 IATSDSK-LTIQQG-----GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG-N 173 + + I G G K+ I I + SSL GI AIN + A + A I +G Sbjct: 117 GNKEPIRYINIIHGKEIKPGLKNNTVIKIKRSESSLRGIEKAINQSGAKIKAEIKKIGLK 176 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY-----------------DASASSNGM 216 + RL +TSN G + + + V GD+ L + + + + + + Sbjct: 177 NKNRLILTSNILGEEGKINIHVEGDEKLNRMLCFPYNENVNEKSKLEYKKENKNFNEPKL 236 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-------QTLTITQDTS 269 E + N+ + V+N +N I D L+N+TLNL + + +TL+ + Sbjct: 237 EEIQRSDNSIIKVDNNLYYRKTNIIRDVLKNVTLNLKKTSKESSKNLEDGETLSFYFNKE 296 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSN-------GALLGDSTLRTIQ 322 K KD+V ++N I+ + L ++ + N G +GD L I Sbjct: 297 KFLKFFKDFVKSFNLFINESNKLREFEINEKSISPYQKRNDKLLYNIGPFIGDYLLNNIT 356 Query: 323 TQLKSMLSNTVSSSSYKT---LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 +LK ++ K + +GI +P +G L LD DKL ++ + + + Sbjct: 357 NKLKFLIRKNFDDYKNKNIIFIEDVGIKINPKNGNLILDNDKLIKNMQNNWKNLRNFFLK 416 Query: 380 DGKKTGITTTIGSNL--TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 + I++ I N+ +++ I + + ++K + K+ + ++ YK Sbjct: 417 SNFISDISSFIEDNIYKKGTINSNKSIISEINNLNKQKKIINKEIEKSEMLSYNKINMYK 476 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 EQF +LD+ M+ + L+ F NN N Sbjct: 477 EQFKKLDLFMSKTDYIRKQLSALFSNNKN 505 >UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Reinekea blandensis MED297 RepID=A4BEP0_9GAMM Length = 1303 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 134/440 (30%), Positives = 229/440 (52%), Gaps = 31/440 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA I SLG+GSGL S +++ L A++A + + + AK++AY +++ L + Sbjct: 1 MAGIQSLGIGSGLLTSELVEQLVEAERAASDLRLDTRTARVEAKITAYAEVRNMLDGLSS 60 Query: 60 ANTALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + ++LS+A ++S TSS +A+T+ A G Y I+V +A++ +L ++ Sbjct: 61 SISSLSQAATIQSSSATSSNDSVLTASTSSTAEPGSYRINVDEIAKSHSLASKQYNSVDD 120 Query: 119 TAIATS-------------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T + +S L+ +Q D + +I+I++ N++L G+RDAINNA GVS Sbjct: 121 TIGTGTLTFKFGTTNYDTDNSYLSFEQSADSEVTSIEINSENNTLGGVRDAINNADFGVS 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM-GYDASASSNGMEVSVAAQN 224 AS++ G G YRL +TS++TG + +M ++ SGD LQ+ + + ME + + Sbjct: 181 ASVVYDGTG-YRLLLTSDETGEETSMEITASGDAGLQALAYNGAQNTAGTNMEETQKGSD 239 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 A + +N +AI ++ N++ ++ +T+NL + + TL +++D S I +V YN Sbjct: 240 ASVRINGLAITSTDNSLDQVIKGVTINLTETSDSAVTLNVSRDVSDIADKIDTFVEKYNE 299 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTL 341 + LTKY D G LLGD+ LRT+QTQL++ +S + + SSY ++ Sbjct: 300 YKGLYDELTKY-------DPSDEIGGILLGDNVLRTVQTQLRAGISEVITGLTGSSYSSM 352 Query: 342 AQIGITTDPSDG-KLELDADKLTAALKKDASGVGALIVGDGKKTGI---TTTIGSNLTSW 397 +IG++TD +D L + K A+ DA V L+ D + + T+G N Sbjct: 353 IEIGLSTDQNDDFNLVFNRAKFEEAMANDAKSVVGLLATDKQASDAQISVVTVGPNTQPG 412 Query: 398 LSTTGIIKAATDGVSKTLNK 417 I KAAT G L+ Sbjct: 413 SYDVNITKAATQGTYTGLSS 432 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 68/422 (16%), Positives = 142/422 (33%), Gaps = 56/422 (13%) Query: 85 TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD--TKTAIATSDSKLTIQQGGDKDPITID 142 + AG V L + L T + +D+ + I + Sbjct: 899 SAAGGGGEFSAGDVVAKLDSSNQLYFETVSKNGVATETTFGADASIQITSADANANSALG 958 Query: 143 ISAANSSLSGIRDAINNA------KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS 196 +SA +++G + + S S +G+ R ++ DN+ +++S Sbjct: 959 VSAGTPNVNGFDGFGLDKGVYTGFDSQASVSYQADEDGKGRFVIS-----FDNSTNITLS 1013 Query: 197 GDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE--------NSSNTIS------ 242 + + + S+S+ + S + Q+ + T+N V + N + Sbjct: 1014 -NVSNNAIAQLGMSSSNQAVNDSTSGQDVEGTINGVEATGRGQYLTASEGNEAATNGYLL 1072 Query: 243 ----------DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + ++ L V G +T T+T + + + + Sbjct: 1073 GGTGSDFSSAEIIDGSNNTLKVVIDGVETNTVTLTSGAYASGDALAAELKAQINADSNLQ 1132 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK--SMLSNTVSSSSYKTLAQIGITTDP 350 AVD D +++ G S + ++ ++ + S + + T Q G+ Sbjct: 1133 AANKAVDVQYDEDTATFGIF---SISKGAESTVRVSEIASGAIDVFGFTTSTQ-GVKGKD 1188 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKK----TGITTTIGSNLTSWLSTTGIIKA 406 + G +D V GD G+ + S L+ G++ Sbjct: 1189 TVG--SVDEA------AGLMLKVTGTRTGDRGSVSYVEGVMKKLDDLFDSILNANGLLTV 1240 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + ++ + + +R A AR + +F D L++ L +T +LTQQFE + Sbjct: 1241 KEQNLEDEMDDIEVERTEVDERTAAFEARLRSKFLYNDKLISQLKTTEDFLTQQFEAMNA 1300 Query: 467 SK 468 SK Sbjct: 1301 SK 1302 >UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AUT9_9ENTR Length = 309 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 124/311 (39%), Positives = 172/311 (55%), Gaps = 14/311 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+SLGVGSG+ LS L L A++ L P+ Q S+ AK++AYG ++ L Q A Sbjct: 1 MAGIASLGVGSGMPLSQTLAQLEASENKRLEPLDKQMKSYEAKITAYGKIRGQLDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D AT AF TT G A G YT+SVT LAQAQTL + D +T Sbjct: 61 SEDLKKFDKIVATKVDDEFDAFKVTTDGKASVGNYTVSVTQLAQAQTLQSTKVSDVKETL 120 Query: 121 IATSDS----KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T L I Q G+K+P+ I++ +S+ +RDAIN + VSA+I+ +GE Sbjct: 121 GETLGEGNKRTLVITQKGEKEPLRIELEDKQTSILELRDAINKKEGNVSATIVKAKDGEN 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L +TS G D+ M ++V GD+ L F+ ++S+ GM+ V A+NA LT+N + IE Sbjct: 181 YLVLTSRKEGTDSKMEITVEGDNKLNEFL---TTSSAKGMKEIVEAKNADLTINGIKIER 237 Query: 237 SSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +N I DA E I LNL T N + + + +D + AIK W +AYN L T+ Sbjct: 238 QTNEIKDAPEGIVLNLKKTTDSNKDNIDKPEIINVARDIEPMKKAIKAWTDAYNELNSTY 297 Query: 290 SSLTKYTAVDA 300 SLTKYT V+ Sbjct: 298 KSLTKYTQVEK 308 >UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Persephonella marina EX-H1 RepID=C0QRT8_PERMH Length = 442 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 113/471 (23%), Positives = 186/471 (39%), Gaps = 48/471 (10%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA I + D ILD + + + + +++ +K A ++ + Q Sbjct: 1 MAGEIYFSNLAGNFDYQQILDQVQYIKSQQILLLQEREAHIQSKKDAITNYRTLIKDLQG 60 Query: 60 ANTALSKADLFSATSTT-SSTTAFSATTA--GNAIAGKYTISVTHLAQAQTLTTRTTRDD 116 L LF+ S + S TA S T ISV LA+ T D Sbjct: 61 IFEDLVSPTLFAEKSVSISDETALSVTITDPTQVSESNLDISVLQLAKNDVWLTGGGVAD 120 Query: 117 TKTAIAT-SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA----KAGVSASIINV 171 AI + S LT+ G I D + SL I D +N A +SAS+ Sbjct: 121 KNAAITSLSAGSLTVSYQGTDYTINYDNT---DSLQSIVDKLNTQFQSNNANLSASLFFD 177 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 G YRL + DTG N +T++ S A G AQNAQ+++ Sbjct: 178 GVN-YRLMIKGLDTGAGNTVTITDSLTGAGSLTDAL------GGFNNVQTAQNAQISIYG 230 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 +E+S+NT L + + VT +TI +D + ++++++ YN ++D + Sbjct: 231 TTVESSTNTFDSVLPGVVIEAKSVTASPVNVTIGKDYQPFKDKLQEFISKYNEIVDFVQT 290 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG-ITTDP 350 T S G L GD TL++I++Q+ + L+ L ++G I D Sbjct: 291 NT-------------SKEGVLSGDYTLQSIRSQIFNGLT---------PLMELGIINVDK 328 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 G L +D +L L+ + S V K + + + S L G +K+ G Sbjct: 329 DTGHLSIDNTELDNKLQTEPSTVQT------KISDLDNNLRDYFYSVLDPYGPLKSKEKG 382 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + + + K + RIDA++ ++QF L V M + L+ F Sbjct: 383 YDRQIEAIEKKIEIDTKRIDAEIEILRKQFIALQVYMAEMEDLRLRLSSLF 433 >UniRef50_A6F9P0 Flagellar distal capping protein-like protein LafB n=1 Tax=Moritella sp. PE36 RepID=A6F9P0_9GAMM Length = 450 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 126/443 (28%), Positives = 214/443 (48%), Gaps = 29/443 (6%) Query: 13 LDLSSILDSLTAAQKATLTPISN-QQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D +S L AA +A L +N QQ++ K+ A+ L + TA LSK+ Sbjct: 3 IDPASFSSQLVAATRAGLDKHNNTQQATVNNKIRAFKALDGKVDNLSTALKDLSKSSDLR 62 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 AT T SS A+T AI G Y+I V+ LA+A + ++ + D LTI Sbjct: 63 ATDTKLSSEGIIKASTTDGAIVGDYSIEVSQLAKADRIGLTFADENWQ---PPRDGSLTI 119 Query: 131 QQGGDKDP------ITIDISA--ANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + G D DP IT+D+S AN++L +R+AIN+A GV ASII G + +L + Sbjct: 120 KLGPDPDPTGSGKSITLDLSTLPANANLMDLRNAINSAADNPGVQASIIRTGT-DVKLVL 178 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S +TG + + +++SG + + + AQNA+LT N +AI + SN Sbjct: 179 SSEETGTAHKLDITLSGGTSGAY---TELDTALTNQTQLSTAQNAKLTFNGIAITSQSNK 235 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + + +N+TL L G LT+ +D +++ V+AYN L+ + T + Sbjct: 236 LENITDNLTLELTKTNVGEPLRLTVGRDDDAITKSLESLVSAYNGLMGRVKTAT--ISKV 293 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 +++ + L GDST ++ QL+S+ SN L Q+G+ D +G++ LD Sbjct: 294 ETGATKNITRAPLSGDSTASSMMRQLRSVFSNLPDGG---YLGQVGLKFD-KNGEISLDK 349 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 + L +L KD + +++G K GI + + L + + GI ++ +++L Sbjct: 350 EALAKSLDKDPDILNNMLLG---KDGIVDRLSTTLKPYSQSKGIYDNRVSSLNSEIDRLQ 406 Query: 420 KDYNAASDRIDAQVARYKEQFTQ 442 ++++ RY +QFT Sbjct: 407 DKTAQLDVQMESLYQRYLKQFTA 429 >UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169342B Length = 505 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 99/517 (19%), Positives = 190/517 (36%), Gaps = 84/517 (16%) Query: 11 SGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT--ANTALSKAD 68 SG+D+ S++ +L A + + ++ +++ + + ++Y + S L F+ + + + Sbjct: 7 SGMDIDSMIANLMKAHRQPINRMNQKKTLYEWQQNSYREVNSKLVDFRNNKLLSKYTSSS 66 Query: 69 LFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT----------RDDT 117 + + S + +A +A A G TI V LA + + + + D Sbjct: 67 FNTLKAAVSGNASAITAKATSKAATGTITIDVESLASSSRVKGKNSQLAGRGDEKLADLE 126 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + D + +I+ G ++ID +L+ I IN K + N NG + Sbjct: 127 AAGVLKLDGETSIKING----VSIDFDPNTDTLNTIVQKINGNKEAGVTAFYNPDNG--Q 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 +S+TS TG + + + + +A++ +N V S Sbjct: 181 ISLTSKTTGTK-----------EISLGGSLLTGTDNLNLNEKIQGTDAKVVINGVEATYS 229 Query: 238 SNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT--- 293 SN S + I + L+ T ++ + D + IK ++N YN ++ + Sbjct: 230 SNQFS--VNGIEVTLHAATGNQPSIVSTSLDADQIVETIKSFINDYNEVLKLLNDKVIEE 287 Query: 294 --------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 D + + +G L GD LR ++L+S ++ + Sbjct: 288 RYRKFPPLTDEQKKDMKEADIKLWEEKAKSGMLKGDPILRKAISELRSAMTTPIYLGPAD 347 Query: 340 -----------TLAQIGITTDP--SDGKLEL-DADKLTAALKKDASGVGALIVGD----- 380 TLA IGI T GKL L + KL L+K+ + A Sbjct: 348 ATSEEKAKNSITLADIGIETGKWFEGGKLTLKNEAKLRETLEKNPEKLMAFFTNRPSGDN 407 Query: 381 ------GKKTGITTTIGSNLTSWLSTTGIIKAATDG---------VSKTLNKLTKDYNAA 425 G + ++ L G + +TD + K + +L K + Sbjct: 408 PPQEQVGVFNKMVDSLKGTLKDISDKAGTSRYSTDKGSTLKDQSILGKQIAELNKKIDQT 467 Query: 426 SDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + ++ + RY QFT ++V + LNS S L Sbjct: 468 NAKLKSIEDRYYRQFTAMEVALNKLNSQSGSLMSFMS 504 >UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GW17_9DELT Length = 577 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 95/474 (20%), Positives = 195/474 (41%), Gaps = 55/474 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I G+GSG+D I++ + + + + K+ A L++++ + ++ Sbjct: 7 GQIRFDGLGSGMDFDQIVNQMVQIEGRRIQRLQQDMQQEQVKMEASQELQNSMVSMRSEM 66 Query: 62 TALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +++ D F ++ + + SA+ +A G Y + V LA+ + + ++T Sbjct: 67 DSMNTLDDFFIRSAESGQESVASASADSSAEEGSYNLEVGQLARNHIMFSNEGFEETDDV 126 Query: 121 IATSDSKLTIQQ-----GGDKDPITIDIS-AANSSLSGIRDAINN--AKAGVSASIINVG 172 + +S T G+ +D+ ++L G+ + IN GV A++IN G Sbjct: 127 VNSSGETRTFSYQYGPEEGEDAHERVDLEVPEGTTLQGLVELINEDPDNPGVRATLINDG 186 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 N EY L + D G D + + D ++ + S AQN+++ V+ Sbjct: 187 N-EYFLQLKGMDQGADYKVEIKDEETDLDG--------FKADDFDTSQEAQNSKIKVDGW 237 Query: 233 ---------------AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 IE SN++ D +E +TLNL + TG +T++ D + +++ Sbjct: 238 PRDEVDEDGEVTEERWIERDSNSVDDVIEGVTLNLYE--TGETQITVSDDHEAIKEQVQE 295 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSS--SNGALLGDSTLRTIQTQLKSMLSNTVSS 335 +V++ N+++ +++ + D + L G+ +R +Q +++ +L++ Sbjct: 296 FVDSVNNVLAMMQGVSRIEEDEEAEDDDMAGPQTSLLTGNYGVRMVQDRIRDVLASAGVG 355 Query: 336 -----SSYKTLAQIGITT-----DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 + L IGI+T + G L LD +L L +D V + D + + Sbjct: 356 FDRDDDPFPNLGSIGISTVTDEEEEDYGLLRLDESRLDEVLDEDPQAVAEIFSADNEPS- 414 Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 T S+ G + VS T+ ++ + ID + AR+ Q Sbjct: 415 ---TDTSDFRFASQIEGTTRPGLYDVSYTM----ENGEITNAYIDGEEARFDNQ 461 >UniRef50_A4G682 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G682_HERAR Length = 662 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 130/413 (31%), Positives = 214/413 (51%), Gaps = 35/413 (8%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 +L VGS +D+++I++ L A++ L ++ +++S ++LSAY +L SAL+TFQ L+ Sbjct: 2 ALTVGSAMDVNAIVEQLMVAEQKPLKLLATKEASHKSRLSAYSSLSSALSTFQGKLADLT 61 Query: 66 KADLFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 F + +TS + T A AG+Y I VT LAQAQ+L++ + + + Sbjct: 62 NLSRFQKNTISTSEAGIATVTAGSTAKAGQYNIDVTQLAQAQSLSSAGQASANGSIGSGA 121 Query: 125 DSKLTIQQGG--------------------DKDPITIDISAANSSLSGIRDAINNAKAGV 164 + +T Q G K+ +I I +N+SL GIRDAIN A GV Sbjct: 122 TTTITFQFGTIAGGTLTGGSYSGASFTSAAGKNSGSITIDGSNNSLQGIRDAINKADLGV 181 Query: 165 SASIINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 +ASI++ G + +RL +TS +TG ++++ ++V GD AL S + D + + + A + Sbjct: 182 TASIVSDGSDTPHRLVLTSTETGANSSLKITVDGDAALSSLLSQDP-VGTQQLRENAAGK 240 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 +A T++ + I+N SNT+ +E + + L + G T+++T+DTS +A+ +V AYN Sbjct: 241 DALATIDGIEIKNPSNTLDKNIEGLNITLAKI--GKTTVSLTRDTSSITSAVNAFVTAYN 298 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTL 341 L T T Y ++++ + G L+GD+T RTIQ ++ M S K L Sbjct: 299 ELHGTLKYQTSY-------NAETKTGGPLVGDATARTIQLGIQRMFSTQPEGLTGELKNL 351 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 +QIGI+ DG L LD KL A+ K +G L T S+ Sbjct: 352 SQIGISFQ-KDGTLALDNAKLQTAVTKFPDDIGRLFATAAAPTDSLVKYASST 403 Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 52/82 (63%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G T + L ++L ++G+I TDG+++ + +L A + R+ ARY++Q++ LD Sbjct: 578 GYATNLQGLLGNYLGSSGMIAGRTDGINENIKQLNNQRTAINTRLIDIEARYRKQYSSLD 637 Query: 445 VLMTSLNSTSSYLTQQFENNSN 466 VL++++ +TS+YLTQQ SN Sbjct: 638 VLLSNMGATSNYLTQQLAALSN 659 >UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEL3_ARTCA Length = 444 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 110/466 (23%), Positives = 201/466 (43%), Gaps = 38/466 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++ G+ SGLD +++++SL + A I + ++ ++SA L SA+ T Sbjct: 2 GLAIDGLSSGLDTTTLINSLMTLEAAPQNLIKTRAAAVQNRISALQGLNSAVADLATKAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L++ + TSS+ + A G +V+ LAQ Q T+ A Sbjct: 62 KLAEPKGLELYTATSSSPKVTIAVGAGAKPGTVDFTVSQLAQMQVSVTKNLS-------A 114 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 D+ LTI K ++ +++SL + A+N + AGV+AS I+VG GEYRL S Sbjct: 115 WPDTTLTITGQDGKAT---SVTPSSTSLDDVVSAVNASGAGVTASKISVGGGEYRLQFAS 171 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL-----TVNNVAIENS 237 TG T+S G A + AQ+AQ+ T + + Sbjct: 172 AKTGAAGGFTVSGLGGPA--------------DLTTVQTAQDAQIKLWTGTSAEATLSSP 217 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 +NT +D L+ ++ +++V+ +T+ +D ++ A D V+ N ++ S+ T Sbjct: 218 TNTFADLLQGVSATVSEVSATPTRVTVVRDNAQISRAATDLVSTANGVLAQISTKTAVVT 277 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 A + +S G GDS +RT+ T + + S + ++ ++ GI+ G +E Sbjct: 278 STDAAGNPITSAGIFTGDSAIRTVSTAVLAAASAPIGG---RSPSEFGISV-TKTGTVEF 333 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 DA K + AL KD +G A + + S+ G+I G T Sbjct: 334 DATKFSEALAKDPAGTMAAVSTIAGRVASAAKQASDP-----VNGLISTKIKGQQSTAKD 388 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + DR+ + + ++ L+V ++ + + S++L+ Q Sbjct: 389 YAAQIESWDDRLQTRRETLQRTYSALEVALSGMKAQSAWLSSQLAG 434 >UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A70B9 Length = 418 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 110/445 (24%), Positives = 183/445 (41%), Gaps = 38/445 (8%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS-ATTAGNAI 91 + Q L AL F+ AN L K + S S A + AT A NA Sbjct: 1 MKKQIDRNNVYSKGLKALDDALKAFRKANEELVKGGSVTRNSVWLSNDAIAKATAAPNAK 60 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGD-KDPITIDISAANSSL 150 G Y V LA A ++T+ G + I +L Sbjct: 61 PGAYDFYVRQLATANQRVVNLPASIKT--GGAGSFEITLNDGTKCRVDIEALGKDGKETL 118 Query: 151 --SGIRDAIN---NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM 205 + AIN V A ++ +L +TS +TG N T+ SG + Sbjct: 119 TPEELARAINGNRELDGKVRAEVV-----SGKLVLTSAETGEQNGFTIDASGLNDPDLKQ 173 Query: 206 GYDASASSNGMEVSVAAQNAQLTV---NNVAIENSSNTISDALENITLNLNDVTTGNQTL 262 ++++ + + AQ+A + + N V I+ SN + +++E +T+ N TG T+ Sbjct: 174 AFESA------KETSKAQDAIILLGGENGVEIKQPSNVL-NSIEGLTITFNK--TGAVTV 224 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 ++ D + ++ +V+AYN+L+D F LT+ AG + + + G L D+ +R + Sbjct: 225 KVSADKEETVKGVRAFVDAYNALMDEFEKLTR-----AGNEKNNEAGGPLEADAGVRALI 279 Query: 323 TQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 +Q+K+ L ++ L ++GI TD G+L ++ L A+K L K Sbjct: 280 SQIKNTLRKSMDGV---RLHELGIETDRK-GRLSINESALDKAMKDSPEKFDKLFG--NK 333 Query: 383 KTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 TG+ + L +WL + G +K + V +L + R D +Y +QFT Sbjct: 334 STGLAGNFDALLDTWLDASKGQMKKRMESVEHNEKRLDAQTDDLKRRYDQVYNQYVKQFT 393 Query: 442 QLDVLMTSLNSTSSYLTQQFENNSN 466 L L +LNST L F +N Sbjct: 394 ALQALQANLNSTLKRLDDLFSTKNN 418 >UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWS8_9AQUI Length = 443 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 98/460 (21%), Positives = 187/460 (40%), Gaps = 38/460 (8%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 G+ D +I+D + + L + +++ AKLS+ G L + F + L L Sbjct: 12 GTNFDGGAIVDQIMQLRSLPLQRLQQEKALVQAKLSSLGNLSKGIGDFLSIFEGLDVDAL 71 Query: 70 FSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS-K 127 F A +T+S+T +A +A ++++V L+QA+ + D A+S + Sbjct: 72 FKAKQATSSNTDVLTAAATDDAPNLSFSVTVNKLSQAEIRVSNGGVSDLSNTFASSGTLT 131 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 +T G + ID +A + +L + DAIN+ + V AS+ G Y+L ++ ND G Sbjct: 132 ITYDTGNGTETFNIDYNAGD-TLEDLVDAINSTQERVKASVYYDGT-SYKLMLSENDVGA 189 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN-NVAIENSSNTISDALE 246 T +G + S +G++ AQNA++ + + + N D + Sbjct: 190 STVET--DTGTGVYVISVSGLPSELGSGLDTLQKAQNAEIVIGTGSPVTSPDNKFEDVIS 247 Query: 247 NITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQS 306 +T+ + D TG+ +T++++ SK + + D+V YN L+ SLT + Sbjct: 248 GLTIEVKD--TGSANVTVSENYSKVTSFLNDFVKKYNGLVRLVDSLT------------T 293 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 GD T+ +++T + LS + I D G++ L+ DKL L Sbjct: 294 GEQALFRGDYTIGSVKTGIAERLSPLIDKGL--------IEYDGDTGEISLNTDKLNELL 345 Query: 367 KKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAAS 426 D GV ++ I GS + + S+ + + + + Sbjct: 346 NTDPEGVKSI---------IEELKGSYSAYLEGQKDLFSSFEKTYSEQVEDIDNRIQSLA 396 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 R+ + + ++ QL+ + Q + S Sbjct: 397 QRLVQEEKLLRREYAQLEAFIAQAEELRQRFQQFMVSLSK 436 >UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 Tax=Desulfovibrio RepID=B8DS94_DESVM Length = 577 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 114/492 (23%), Positives = 211/492 (42%), Gaps = 52/492 (10%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + G+G+G D S ++D L + ++ ++ ++ + + A+G L++ + + + Sbjct: 7 GGVYFSGLGNGTDFSKVIDQLKSIEQIPQKRLTLWKADWQRRQDAFGELRTEIASLKDIV 66 Query: 62 TALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++S + F T ++S+ T SATT + + G Y I V LA + T T D KT Sbjct: 67 DSMSTMNKFLVKTGSSSAETVASATTDSSVLEGNYKIEVGQLASSSIWTYNTAFADKKTK 126 Query: 121 IA--TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEY 176 + SD + G IT+ + +++ +++ INN GV A ++ G G Y Sbjct: 127 VNDSGSDQQFVYTYMGKTRSITV---PSGTTIDALKNMINNDPQNPGVKAMLVQNGTG-Y 182 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----V 232 D G + +++ D+ + G +A++ A+QNA+ VN Sbjct: 183 TFQFRGMDLGANATLSV-----DSGTTVTGLPGTAAT---WTVQASQNAKYRVNGWPAAT 234 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 +E++SNT++ A+E +TL L DV G +++ DT K + +K +V+A N++ L Sbjct: 235 WLESASNTLTGAVEGMTLTLKDV--GTTQISVATDTEKIKENVKSFVDAMNAVRSKIKEL 292 Query: 293 TKYTAVDAGADSQSS-------SNGALLGDSTLRTIQTQLKSMLSNTVS----------- 334 T + + + L G+ ++ + TQLK ++ + Sbjct: 293 TAVNSSKDVDNPDDASSLYSMQKGSILTGNYGVQLLSTQLKMATADRAAGFEYQYKDGNL 352 Query: 335 --SSSYKTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 + +LA IGI T+ G LELD KL LK + + V L D G+ Sbjct: 353 LRGDEFSSLAHIGILTNAETNSLNAGLLELDEAKLDEVLKNNPTAVAELFAAD----GLP 408 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 + S+ + + G+ KA V+ ++ NA A + +Q T ++ Sbjct: 409 ESDSSDFSYYSHVKGVTKAGIYDVTYDVDASGNIVNAFIGGKRANIDNANKQITAMEGDA 468 Query: 448 TSLNSTSSYLTQ 459 L L+Q Sbjct: 469 RGLALQIDNLSQ 480 >UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. PE36 RepID=A6FHX7_9GAMM Length = 465 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 119/493 (24%), Positives = 211/493 (42%), Gaps = 69/493 (13%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA ++ G+GSG+DL SI+ + A+KA ++N++ S T +LS GTL++AL FQ Sbjct: 1 MAGMTMAGMGSGMDLESIIKTFVTAEKAPKEARLNNKEISITTELSGVGTLRAALADFQN 60 Query: 60 ANTALSKADLFSATST-------------------TSSTTAFSATTAGNAIAGKYTISVT 100 L D F + T +++ + T G G + + VT Sbjct: 61 ITNKLGNTDTFYQSKTNIQYQGRSVDSSAVRQAGESNAILPITIETKGVVPKGSFDVKVT 120 Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA 160 LAQ L + D T + + G D + ++++ +L I+ IN A Sbjct: 121 KLAQGARLESDFMPDRT---VKLGQGIMYFDAGKDSFEVDVNVA---DTLQDIQKKINEA 174 Query: 161 --KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV 218 G+ A+IIN G ++ TS+ TG+ N +T+ S A + V Sbjct: 175 PNNYGIGANIINSDLGA-KMVYTSDKTGVANDLTVFTSDSSL----------AMISSKMV 223 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN--QTLTITQDTSKAQTAIK 276 AA +A + ++ I SNT + A+ +T+ N +T N + D + + Sbjct: 224 GKAASDAIIAIDGNIITQESNTFTHAVSGVTITANSLTANNDVVNFSTATDHAAVSDLVH 283 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 ++++ YN LI T ++LT G+L DST R+++ Q++S+ V+ + Sbjct: 284 EFIDGYNRLISTINTLTD------------PETGSLKFDSTARSVKQQMQSITGGVVNGA 331 Query: 337 S--YKTLAQIGITTDPSDGKLELD----------ADKLTAALKKDASGVGALIVGDGKKT 384 S TL GI+ + G L ++ A +L A+ +G L G+ Sbjct: 332 SSKLNTLYAAGISLE-EGGVLAINPFGSHGSQSGAQRLDHAVNNALDDLGKLFSGN---N 387 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ I + L + L+ G I ++ L L D + I + ++++T +D Sbjct: 388 GVAAQINAVLDNSLNNKGTITQRQSLLNTNLRSLEDDRDKLDRHISSYEDTLRKKYTAMD 447 Query: 445 VLMTSLNSTSSYL 457 ++ N+T Y+ Sbjct: 448 NTVSRYNATGDYI 460 >UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KR01_PSEPG Length = 463 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 130/484 (26%), Positives = 236/484 (48%), Gaps = 41/484 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GSG+D +I+DSL AAQKA I+ Q T LS+ G +++AL F+ Sbjct: 2 MAGTTVSGIGSGIDTQAIVDSLVAAQKAPKQAQINTQTLKATTTLSSIGKIQAALDAFRG 61 Query: 60 ANTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A T ++ + F S SS + T A G + + V LA A ++T+ + Sbjct: 62 ALTNMTDTNSFGGLSLKSSDEKVATVTMGTGAANGSFKLIVDKLATASKVSTKVYANGAG 121 Query: 119 TAI--ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNG 174 + + ++ + LT+ Q G +++ A ++L +RD+IN+ AG+SA+++ NG Sbjct: 122 SVVNPGSTPTTLTMTQNGKAYDLSV---PAGATLQQVRDSINSQFGVAGLSANVLTDANG 178 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 RL VTS G + +TLS + S G V +A+ T++ VA+ Sbjct: 179 S-RLVVTSTKMGEGSDITLSGN-------------SGIDTGYTVVEEPADAEYTLDGVAM 224 Query: 235 ENSSNTISDALENITLNLNDVTTGNQT--------LTITQDTSKAQTAIKDWVNAYNSLI 286 ++ +N I+DA+ + + L + N T L++T ++ ++ +K +++ YN+L+ Sbjct: 225 KSKTNDINDAVSGLNIKLVGTSPTNATSGEKTATILSLTTSSATLKSGLKGFIDTYNALL 284 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 ++ TK T G S + AL GD+T+RT+ T ++ L+ + + K+LA G+ Sbjct: 285 TVMNAETKVTKNADG----SMTAAALTGDATMRTLMTSIREELNAVSGNGTLKSLAAFGV 340 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIK 405 T+ G L LD K A +A+ + ++ G K G+ + + +TG + Sbjct: 341 TSAQDGGALSLDDKKWEKAASTNAADLTSIFNG---KDGLLARLQKVTEPFAKASTGTLA 397 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE--N 463 + +S++L KL + + R++A ++++ +D L+T L S + N Sbjct: 398 ERSKVLSESLTKLKTEQDTLDARMEALKKSLQDKYNNMDTLVTQLRQQQSSVLSTLNALN 457 Query: 464 NSNS 467 SNS Sbjct: 458 KSNS 461 >UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Enterococcus RepID=C9A954_ENTCA Length = 473 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 136/495 (27%), Positives = 225/495 (45%), Gaps = 51/495 (10%) Query: 1 MASISS-------LGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSA 53 MAS++S LG SG+ S ++ L AA T N+ +S A+ +A+ + + Sbjct: 1 MASVTSSSGISTTLGSYSGV-TSEDIEKLLAADAINKTRAENKITSLKAQKTAWSDISTR 59 Query: 54 LTTFQTANTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT 112 LT F + AL K D + +TT++++ S A G Y + V LA A +T Sbjct: 60 LTNFLSKVDALQKDDAYQTKKATTTNSSIASIAGTTEAPEGTYDLKVNQLATATKVTGSQ 119 Query: 113 TRDDTKTAIATSD----SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG--VSA 166 +KTA+ S + + + G +I+I+A + SL + IN+ V+A Sbjct: 120 VAQSSKTALNVSGQLSLTSSEVDEDGKPITASIEITAED-SLKDVAAKINSQSKTTFVAA 178 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 SI++ RL +T+ G N + G+ A +G A+ + Q A Sbjct: 179 SIVDN-----RLILTNTKMGDKN---FLIDGNAAEGLGIGSTAT--------TTQGQPAI 222 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 ++ + I SN+++D ++ +TL L + + TL++ DTSK A++ V+ YNSL+ Sbjct: 223 FELDGMKITRDSNSVTDVIDGVTLTLAKKSEEHVTLSLANDTSKVVDAVQGLVDQYNSLM 282 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 S+++ G L+GDS L +QTQL+++++ S S T ++GI Sbjct: 283 SFIDD----NLTVGDPSSENNKTGTLVGDSALTRLQTQLRNLITIPAVSGSKLTANKLGI 338 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALI-----------VGDGKKTGITTTIGSNLT 395 +T +DG L LD KL AL +D + V + K+TG T + Sbjct: 339 STVDNDGTLGLDTTKLKEALAEDPAAVKSFFYASTKTKEADGTASTKETGYTLALKELAN 398 Query: 396 SWL----STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 S++ + GII + T+ L K D + + RY FT+LD +M Sbjct: 399 SYVVNTSANKGIIATKSATYDSTIKDLNKQITRFDDILAMKKERYITMFTKLDSVMMEAE 458 Query: 452 STSSYLTQQFENNSN 466 + SYL+ QF N SN Sbjct: 459 NQLSYLSNQFANTSN 473 >UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ11_DESRD Length = 467 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 112/478 (23%), Positives = 213/478 (44%), Gaps = 41/478 (8%) Query: 1 MASISSLGVG---SGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTT 56 + S+S + +G SGL ++++ L +A Q+ +TPI+ + ++S + +L+S + + Sbjct: 3 LGSVSGVYLGGRPSGLP-DNLVEQLVSARQQQKITPINQDINEVDDRISLFQSLESKVAS 61 Query: 57 FQTANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 + L + F A ++S+ A S G +G YT+ V LAQA + D Sbjct: 62 LEDTLGDLQDSSDFEEAKVSSSNDQALSVAQNGAPQSGSYTVEVDTLAQAD-VQLVGLDD 120 Query: 116 DTKTAIATSDSKLT-------IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T T + T + T + D + T SL + D IN + AGV A Sbjct: 121 GTTTGVDTGIADTTDASLVEDVTFEFDHNGSTHSFDTTGKSLQALADEINASDAGVQAYT 180 Query: 169 INVG---NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 N+G + EY LS+ S+ G G D L S + + +S E S+A Q+A Sbjct: 181 ANIGTQDDPEYALSLKSDTPG---------GGVDDLISNISGNLFGTSTTTENSMAGQDA 231 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 +V+ V+ SSNTI D + +++ LN+ G ++ + +DT + + +V+A+N + Sbjct: 232 AFSVDGVSYTRSSNTIEDVIPGVSMTLNENFAGQVSVGVEKDTEAIEKKVSAFVSAFNDV 291 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLA 342 + + + G LLG S ++ + ++ ++ S ++Y L Sbjct: 292 RSF-------ISSKSSYSEDDDTAGGLLGSSLAGRLEMSMANLAIDSFAALSGNTYDRLP 344 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-T 401 +IG+ DG L LD+ K A++ + V +L DG G+ + S L + + Sbjct: 345 EIGVELQ-RDGTLALDSAKFQEAMETNGQDVASLFTEDG---GVADKMQSLLGGYTDSID 400 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 G + + ++ +++L D A + I++ R +++T ++ + +T Sbjct: 401 GSLTYKLESLNNQMSRLEDDKQDAYNSIESYRDRLVDKYTAMETQIRQYQQMQESITS 458 >UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 Tax=Clostridia RepID=A4XK51_CALS8 Length = 540 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 115/529 (21%), Positives = 193/529 (36%), Gaps = 80/529 (15%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 G+ SGLD SI+ L + QKA + Q + Y + +++F+ L Sbjct: 23 RIGGLASGLDTDSIIQGLMSIQKARYNKLYQQHQLLQWQREDYMNMAKEISSFRDYIFNL 82 Query: 65 SKADLFSATSTTS---STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR---------- 111 + F T + T NA+ G Y I++ +A+ T+ Sbjct: 83 KLSSNFVKFKATGPAIDGGYINVTGTANALEGNYEITINSIAKPSTMVLSNISATFDKLK 142 Query: 112 ---------TTRDDTKTAIATSDS---KLTIQQGGDKDPITIDIS---AANSSLSGIRDA 156 + T I T D KL+ Q D ITID++ ANS + + Sbjct: 143 SNNISTLYVSISTQTDADINTLDYVTVKLSTTQPSTSDYITIDVTKFSDANSFAAELVSK 202 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM 216 +N+ G ++ + G +L VT+ TGL + L +GD L D++ Sbjct: 203 LNS--TGTVSAYYDSTLG--KLLVTTKQTGL-IELKLDRTGDQNLSDL--TDSTTQGTNA 255 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT-LTITQDTSKAQTAI 275 EV++ + +T +++ +S + + + LN T G + T+++D I Sbjct: 256 EVTINDLSRNVTYSSLKYSRNSFSF----LGMVITLNKDTAGTKVGFTVSKDIDAIVNNI 311 Query: 276 KDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTL 318 KD++N YN L+ S + D +++ G L D L Sbjct: 312 KDFINKYNELVSKIYSKITEKRNRDYPPLTEDQKAQMKEEDIKKWEEAAKKGLLNNDPIL 371 Query: 319 RTIQTQLKSMLSNTVSS--SSYKTLAQIGITT----DPSDGKLEL-DADKLTAALKKDAS 371 + ++ L V SS + + GI T + +GKL + D KL A+ + Sbjct: 372 SSFLNNMRYYLYKAVPGLPSSLDVITEAGIETFSYFESKEGKLYIKDEGKLREAISNNLD 431 Query: 372 GVGALIVGDG-------KKTGITTTIGSNLTSWLSTTGIIKAA---------TDGVSKTL 415 L + GI L + K L Sbjct: 432 AFVKLFTYTDSDPDTPIENQGILQRFYKLANDTLKKIYDTAGKPYFTSYYDPNSYIGKQL 491 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + NA +R+ RY QFTQL+ L+ +N+ SS+L+QQF Sbjct: 492 RSIADQMNAEQERLKQIEDRYYRQFTQLERLIAQMNTQSSWLSQQFSGK 540 >UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagellar hook-associated 2-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS91_9DELT Length = 572 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 170/371 (45%), Gaps = 24/371 (6%) Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN- 159 HL + T+D+T+ A+ K I GG + I + + +L + + IN+ Sbjct: 209 HLKLDANVRLAITKDETEIGFASPGFKYEIGSGGALNTIDVPLEEG-LTLEQLVERINSE 267 Query: 160 AKAGVSASIINVGN--GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME 217 GV+ASI++ G+ YR+ + +NDTG +N + + ++ D M A +G + Sbjct: 268 DNPGVTASIVDTGDPVAPYRMVMRANDTGENNRIRI-LNNPDLQGLTMNEQQGADDDGNK 326 Query: 218 VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 VS+ NA+L V+ + + NTISD ITLNL G TL ++ T + + + Sbjct: 327 VSL---NAKLRVDGITYQRQDNTISDIFPGITLNLQG--EGTSTLNVSGRTEDVREMVVE 381 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 V YN LI +Y D +S GAL ++ + ++ QL+ ++++ Sbjct: 382 MVELYNELIQEVGDKVRY-------DEESGQPGALAR-TSAQGLRHQLEGIMTSRFEGDE 433 Query: 336 -SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDG--KKTGITTTIGS 392 +++ +G+ DG + LD L L +D+ V A + GD ++ G + Sbjct: 434 SGQVRSMFDLGMEFQ-RDGSITLDTQVLDRQLAEDSDAVRAFLQGDAQREQQGFADNLQD 492 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 L S S G++++ + + L + + + R+D + A QF QLD M + S Sbjct: 493 RLGSIASMGGVMESEKNNAQDRIRDLERRIESETMRLDRRYAAMTRQFIQLDSYMQRMQS 552 Query: 453 TSSYLTQQFEN 463 YL QFE+ Sbjct: 553 MGDYLEGQFES 563 >UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVA5_9GAMM Length = 482 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 123/479 (25%), Positives = 209/479 (43%), Gaps = 35/479 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++L GSG+D+ S+ +LT A+K + + A++S YG + S L+ QTA Sbjct: 21 MTALDAGSGVDVVSLARNLTDAEKVPKQALIQTAIDNAEAQVSGYGLISSQLSLLQTAFE 80 Query: 63 ALSKADLFSATSTTSSTTAFSATT-AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 +L+ + + + ++ TA T G + G Y ISV LA Q + + + + AI Sbjct: 81 SLNDSSEVANSYGATTDTALGFTAFDGTEVDGSYAISVEKLALEQIMISDE-YNASDYAI 139 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG--EYRLS 179 T ++ G T I+ ++ + +G+ AIN A GV+AS+++ G G YR+ Sbjct: 140 GTDSFDIS-ITVGSSSTTTTAITVSSLTPAGVVSAINTADTGVTASLVDTGTGGTNYRII 198 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +T TG + T+S + D AAQ+A++ + + I SN Sbjct: 199 LTGK-TGSEGVFTISSNPDLGFGDTGN-----------TLQAAQDAEIEFDGLTITRDSN 246 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 SD + TL L + TT T+ I DTS QT +++ V YN D LT T Sbjct: 247 EFSDVVTGATLTLYETTTSAATVAIYSDTSALQTKLENIVTVYNDFRDLMDELTTST--- 303 Query: 300 AGADSQSSSNGALLGD-STLRTIQTQLKSMLS--NTVSSSSYKTLAQIGITTDPSDGKLE 356 D +G L D ++ R I Q++ L ++ +S IG+T + G L Sbjct: 304 --IDEDIEHSGDLQRDFASARYITNQIRDALREDSSTASGEISAFRDIGVTINSK-GDLT 360 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKT--------GITTTIGSNLTSWLSTTGIIKAAT 408 D A++ + + V ++ + G+ + S + + L++ GI+ Sbjct: 361 FDEATFDEAVEDNYNDVVMMLTANTNDQTLYGSSSVGMAQDVASVIEALLASDGIVATRE 420 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + ++ R++ RY QFT ++VL LN YLT Q E S + Sbjct: 421 SNAEDLGEEYEEELATLETRMELLYDRYISQFTAMEVLTEKLNGIKDYLTGQLETLSKA 479 >UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZA7_SALRD Length = 494 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 106/502 (21%), Positives = 213/502 (42%), Gaps = 56/502 (11%) Query: 5 SSLGVGSGLD--LSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+G +GL ++ ++ + N++ S L L++ Q+ + Sbjct: 3 TSVGPSAGLSPKYQRLIQRTLRIERQPKLELQNERQQKKNTKSLVSDLDGKLSSLQSQLS 62 Query: 63 ALSKADL--FSATSTTSS--TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L+ F + +++ T FS + A G Y+++V LA ++T D Sbjct: 63 TLTDTTSSPFDGRNASAAEGTEGFSVSADETASTGSYSLAVNRLASEDGRVSQTFDADKS 122 Query: 119 ------TAIATSDSKLTIQQGGDKDP-------ITIDISAANSS--LSGIRDAINNA--- 160 T + + D +P +T+D N+ LS I+ AI++A Sbjct: 123 NLSDFFTNNGAQTFSVDVSTPTDSNPDARTSIDVTVDSDGTNNKEVLSDIQSAIDSAFQS 182 Query: 161 ---------KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM--GYDA 209 SAS+IN +G RLS+ S TG ++ S S ++ L Sbjct: 183 AVDDGTLSADQRPSASVINPTSGTARLSLRSQQTGYQGRLSFSDSSNNLLSELQVNADQI 242 Query: 210 SASSNGMEVSVAAQN-------AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTL 262 + + G E++ + ++ +N + +SN ++DA++ +T+NL + + Sbjct: 243 ADDTQGGEITEVGTDEASSKLTSEFELNGLTFTRNSNEVTDAVDGVTMNLEEANGTASSF 302 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 +T D AQ+ +K++V+ N +I + T + ++ G L DST R + Sbjct: 303 EVTADEEGAQSVVKNFVDRVNEVITFLNEKT-------NVNPENGERGELADDSTFRRLS 355 Query: 323 TQLKSMLSNTVSSS--SYKTLAQIGITTDPSDGKLEL-DADKLTAALKKDASGVGALIVG 379 QL++ + V TLA IGI + DG L+L D D L A++++ + L G Sbjct: 356 RQLRTDATRPVEGQPEGLNTLADIGIEAN-RDGTLKLTDEDALRTAVRENQGALKDLFAG 414 Query: 380 DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 G+ T + + + T G++ + D + +++++ N +R+ + + +EQ Sbjct: 415 ---PDGVATRMKERVDQYADTGGLLDSRQDSIDSSIDRIDDRINGLDERLQRREQQLREQ 471 Query: 440 FTQLDVLMTSLNSTSSYLTQQF 461 + +++ + SL S ++Q+ Sbjct: 472 YAEVESTIRSLASQQQSISQRL 493 >UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UUH2_XANC8 Length = 442 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 123/467 (26%), Positives = 213/467 (45%), Gaps = 32/467 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS+ S SGLD+ +++ +L + QK I+ ++ T +LSA +KS++TT ++ Sbjct: 1 MASVIST-SSSGLDIPTVVSTLVSRQKDPEQARINKAGTAATTQLSAISQIKSSMTTLKS 59 Query: 60 ANTAL-SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A + S AD + ++ + F+ATT +A G Y++ V LA AQ L + D Sbjct: 60 ALDKVVSSADTNAYKASVPTDAGFTATTTSSAAPGNYSVEVVSLASAQKLASGAFTADAT 119 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 LTI G + I + L+ I AIN A GV+AS++ +G++ Sbjct: 120 ----VGSGTLTIGYGDKSITVDI---SGTDKLADIAAAINKAAGGKGVTASVVTANDGQH 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L + DTG A+T+S S G + + G+ VAA +A + V+ + Sbjct: 173 -LVFNAVDTGTKGALTVSASDPSLSALTFG---AGVTGGLTQQVAAADALVRVDGFERTS 228 Query: 237 SSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSNT++D + + LNL G TL +T DTS + + + AYN+ + + Y Sbjct: 229 SSNTVTDIVPGVVLNLTKAAEGTKVTLGVTADTSGLKGNLTAFAAAYNTANTLLKNSSSY 288 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 ++++ + AL GDS +R +Q QL+ +S ++S L +G+T D DG + Sbjct: 289 -------NAETRTASALTGDSLVRGLQQQLRGQVSGSISE-----LKALGLTID-KDGVM 335 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 D K A+ D + D K T + + G + +D ++K + Sbjct: 336 SFDGGKFDTAIAADGGAAAEALGKDSKFGSGLTKLLDANVNV--NNGTLTLRSDSLNKQI 393 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 D + R++ RY QFT ++ +++ + + L+ Sbjct: 394 KGFEADLDNLDARMEKLTDRYTAQFTAMETMISKMQGATGSLSSLLA 440 >UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanthomonas albilineans RepID=D2UAA1_XANAL Length = 454 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 128/462 (27%), Positives = 227/462 (49%), Gaps = 36/462 (7%) Query: 13 LDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLF 70 LD+ + + +L A ++A I+ ++ TA+LSA GT+K A++ QTA +LS AD Sbjct: 15 LDIPTFVANLVAQERAPQQDRINKDGTASTAQLSALGTIKGAMSNLQTAIKSLSTSADTG 74 Query: 71 SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 + +T + ++A+ NA AG Y + V LAQAQ LT+ + LTI Sbjct: 75 AFNATVADGAGYTASVTSNATAGNYNVEVVSLAQAQKLTSAAYASTAT----VGNGTLTI 130 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLD 188 G + +TI S+L+ I AIN A GVSAS++N +G + L + + TG Sbjct: 131 AYGTNSLNVTI---VPGSTLNDIAAAINKAAGGKGVSASVVNADDGNH-LVLNAVSTGTA 186 Query: 189 NAMTLSVSGDDALQSFMGY--------DASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 A+T+ SG D + + Y +S+S++GM + AA +A + V+ +SSN+ Sbjct: 187 GALTVKASGGDGGLAALTYPSSSSSSSSSSSSASGMTQNTAATDAVVRVDGFTRTSSSNS 246 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 I+D + LNL G+ L I D S + + V+AYN+ +S + Y Sbjct: 247 IADLAPGVVLNLTKAIPGSTFKLNIANDNSALKGNLTALVSAYNATNTVLNSSSDY---- 302 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 ++ + ++ L GD+ +R +Q L+ +S+ +++ L +G+T D DG + D+ Sbjct: 303 ---NATTKTSSPLTGDAMVRGLQQSLRKQVSDNITA-----LGALGVTID-KDGVMSFDS 353 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 K +A+ +++ ++ +G T T+ + T G + T+ ++K ++ LT Sbjct: 354 GKFDSAMASNSASAKSMFGANGSFTSGMNTL--LNGNLDGTNGTLTQRTNALNKHISDLT 411 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + R+ +Y +F+ ++ L+ + S S L QQF Sbjct: 412 DQLSDLDKRMSTLSDQYTARFSAMNTLVAQMQSIQSSLAQQF 453 >UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGR3_CELJU Length = 684 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 200/397 (50%), Gaps = 35/397 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS+LG GSG+D +++ + L KA T ++ +++ ++S YG L+S+L ++A Sbjct: 17 ISALGTGSGIDTNALTNQLVEINKAAQTQRLTTRKTLLETQISDYGLLRSSLAKLESAAA 76 Query: 63 ALSKADLFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL +D F+A + + +T+ + T +A AG Y + V +AQAQ+L++ T Sbjct: 77 ALGSSDTFNAKAVSLPSTSLLSITKLNASANAGDYQLKVEQIAQAQSLSSGTFAS---MN 133 Query: 121 IATSDSKLTIQQGGDKDPIT------------IDISAANSSLSGIRDAINNAKAGVSASI 168 LTI+ G D +T I I +N+SL G+RDAIN A GVSASI Sbjct: 134 APIGKGTLTIRLGEWNDDLTSFGVDSTKTGAEIVIDDSNNSLMGLRDAINKAGIGVSASI 193 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 ++ G G Y+L +T+ +G N + +SV+ D + + S+ + +A++ Sbjct: 194 VSDG-GSYKLLLTAK-SGAKNEIEISVAEADGSSGLSSFSFNESTQNLTQQQGGLDAKIR 251 Query: 229 VNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 VN + + SN + D +E + +L + T T+ IT+D + A+TAI+D+V AYN+ Sbjct: 252 VNGLLVSRESNQVKDVVEGLEFDLFAASTTETITINITEDKTVAETAIRDFVTAYNTFKT 311 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIG 345 L G D++ G+L D + + ++++LS++V+ + L+ +G Sbjct: 312 EVEKL-------VGFDAEKKDYGSLRTDPLAKNLVQGIRNILSSSVAGLSGGFTNLSYLG 364 Query: 346 ITTDPSDGKLELDA----DKLTAALKKDASGVGALIV 378 I T+ DG L++ AA+ + V L V Sbjct: 365 IRTE-LDGSLKIIENEGNTGFRAAIDNNFDLVRDLFV 400 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 44/78 (56%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + T+ + + +L ++G+IK D +++ + ++ KD A R +A AR QF ++ Sbjct: 598 GFSGTMSNLINDYLKSSGVIKEREDSINRDITRVGKDEEALERRSEAYRARLMSQFQAME 657 Query: 445 VLMTSLNSTSSYLTQQFE 462 ++ SLNST S+L + Sbjct: 658 AIVRSLNSTGSFLDGILD 675 >UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4S8_THIIN Length = 653 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 228/390 (58%), Gaps = 16/390 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+S+S G+ SG+++ S++ SL+AA + +T + NQ+ S+ + LSA+G+++S+L++ Q+ Sbjct: 1 MSSVSISGLVSGINVQSLITSLSAAYQQPITLLQNQEQSYQSTLSAWGSVQSSLSSLQST 60 Query: 61 NTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + + S+++A S T + NA G Y++S LAQ Q++ + T T Sbjct: 61 VAGLQNITSLNNRTVNLSNSSAVSGTASANAPLGTYSLSNIVLAQTQSIYSGDFASATNT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 A+ T ++ + G I+I + N+SL+GI AIN + +GV+A++I G G YRL+ Sbjct: 121 AVGTGTLQIQV---GSGSVTNINIDSTNNSLNGIAAAINQSGSGVNAAVIYDGTG-YRLT 176 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +T N+TG NA T+S SG + Y A A S GM S A+NA +++N + + +++N Sbjct: 177 LTGNNTGAANAFTVSTSGATGSLGSLSYSAGA-SGGMTESQTARNASVSINGLTVTSATN 235 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 +S A+ ++LNL + + G+ TLT+ DTS +++ +V+A+N+ + T + LT YT Sbjct: 236 AVSGAIPGVSLNLLEAS-GSTTLTVANDTSAFVQSVQSFVSAFNTTMGTLNQLTAYTPGS 294 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLS----NTVSSSSYKTLAQIGITTDPSDGKL 355 S G L+G++ ++T++TQL +++S T S+Y +L +GI+ DG L Sbjct: 295 GA----SGQGGPLIGNAGIQTLRTQLLNLISGQGIGTTPGSAYTSLGAVGISL-AQDGTL 349 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTG 385 LD+ KL++AL+ + + V L G T Sbjct: 350 ALDSGKLSSALQSNYNAVAGLFGQVGTATN 379 Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Query: 383 KTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 GI + + LT L+T +G + AAT G++ T+ + + + +Q A ++QF Sbjct: 558 SQGIYQQMNAILTQALNTQSGFVSAATSGLNNTIKGINQQITQLQNSAASQTALLQQQFN 617 Query: 442 QLDVLMTSLNSTSSYLTQQFE 462 + + L S YLT F Sbjct: 618 AMQTQVAQLQSVGQYLTAFFN 638 >UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0K8_JONDD Length = 449 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 100/465 (21%), Positives = 191/465 (41%), Gaps = 41/465 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+S G+ SGLD +SI+D + T + +Q + ++A L + +++ Sbjct: 2 SMSIGGIASGLDTASIIDQFMQVEAIPRTQLQTKQKTTETFVAALQALNTKVSSLTENAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 K+ F T+S+ + + +T A AG V LAQ ++ + D + Sbjct: 62 KAMKSASFDVWKGTASSDSVTVSTGTGAAAGTLEFRVDALAQGKSTLSGVLADASSL--- 118 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGEYRLSVT 181 + TI +G T I+ +SSL+ + AIN +A++GV A+I+N +G RL +T Sbjct: 119 LTGGDFTITKGDGS---THTITPVSSSLADLASAINSDAESGVKATIVNTTDGS-RLQLT 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT------VNNVAIE 235 + TG + + G AQ+AQ+T + + Sbjct: 175 ATKTGAT-------------DGAFTITSGTAEAGFSSIRGAQDAQITLWPSLGLPGSTVT 221 Query: 236 NSSNTISDALENITLNLNDV---TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 ++SNT SD + + + + V T T+ + +DT + V N +I+ +S Sbjct: 222 SASNTFSDVMAGVNVTVTKVSAPTDDPITVDVAKDTEAVSKLANNLVAQLNQVINEVASR 281 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 +K T + Q+++ G GDS R + ++L S V ++ ++IGI D Sbjct: 282 SKVTTSTGSSGQQTTTGGLFTGDSATRQLVSRLTEAGSYAVDG---RSPSEIGIEI-TRD 337 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGV 411 G + +K A D +G A + + T + + + G + Sbjct: 338 GTFTFNEEKFQEAFAADPAGTQAFLTA------VATRVENVGKATSDKYDGSLTLRVQSQ 391 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + + R++ + A Y + +T L+ +++L S ++ Sbjct: 392 QSLVRDYGTQIESWDRRLEQRRANYVQIYTALESALSNLQSQGTW 436 >UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gammaproteobacteria RepID=Q2BI11_9GAMM Length = 695 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 43/422 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D +S++ L +KA ++ +Q + A++SAYGTLKS+L+ FQ A Sbjct: 6 IRSLGAGSGIDTTSLVSQLVEIEKAPQEQRLNTRQETLEAQISAYGTLKSSLSEFQNAMA 65 Query: 63 ALSKADLFSATSTTSSTTAFSA--TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +L+ D F+A S + + A G Y I V +AQAQ+L T + D Sbjct: 66 SLASNDTFNARSVAFPDSTVITPNSVDPGAQTGTYQIEVVDVAQAQSLATGSYADKDAAL 125 Query: 121 IATSDSKLTIQ------------------------QGGDKDPITIDISAANSSLSGIRDA 156 T ++ ++ + I + A++ SL I D Sbjct: 126 GETGTLTVSFGTWTYDEDAAPGADADAINEPYSFVSNDERAALNISVEASD-SLDDIADK 184 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS----GDDALQSFMGYDASAS 212 IN A A V AS++ V +G+Y+L +T+ +G +NA+ +S GD S ++ + Sbjct: 185 INAADADVQASVLLV-DGQYQLLLTA-PSGKNNALRISSDDATKGDATGLSVFEFNENEH 242 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKA 271 S + + ++A+L VN + + +N I+D ++ +LN GN T T++ D S A Sbjct: 243 SQ-VTETQQGKDAELKVNGLTVLRETNEINDVIQGFNFSLNKADPGNSLTFTVSADKSGA 301 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 Q A +D V AYN T +L + ++ + G L D T +T+ ++++ ++ Sbjct: 302 QQAARDLVEAYNLFYQTSQNL----VGTSTDENNQTVKGDLSTDGTAKTLINRIRTAVTA 357 Query: 332 TVSS--SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 V+ + L IGI T+ DG L ++ D + A + + L + + + T Sbjct: 358 EVTGLSGGFTALTNIGIRTE-LDGTLSINEDDFSNAFNNNYDLIENLFAQNTQSSSNQVT 416 Query: 390 IG 391 +G Sbjct: 417 VG 418 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%) Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 + V A V GI + + S LS++G I+ + ++ L +T+D R++ Sbjct: 595 NAVAAGTVSTTFTRGIAGELTVLIDSLLSSSGTIENREENINSALEDVTEDRAELDRRME 654 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 AR QF ++ ++ S ST + L + Sbjct: 655 KVEARLYSQFLAMERIINSFQSTGNQLDGILD 686 >UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 Tax=Ralstonia RepID=B2UJT2_RALPJ Length = 680 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 142/420 (33%), Positives = 228/420 (54%), Gaps = 32/420 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 IS G+G+ +D+++++ SL + LT + NQQSS+ +LSA GTLKSAL+TFQTA + Sbjct: 16 ISIPGIGTSIDVNTLVSSLMKVESQPLTLLQNQQSSYQTQLSAVGTLKSALSTFQTALSN 75 Query: 64 LSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L+ A +SA + T+ SA+ A AG Y ++V+ LAQ+Q L + T + Sbjct: 76 LTTASNYSAMKASGYDTSVLSASVTSAAAAGSYAVNVSQLAQSQVLAAQGQTSTTTAIGS 135 Query: 123 TSDSKL--------------------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + + + T Q G +I I+++N++L+GIRDAIN+A Sbjct: 136 GTSTTVSFSFGTVSGGTFSNGKYSGATFTQNGSLAGGSITINSSNNTLAGIRDAINSANL 195 Query: 163 GVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GVSASI+N G+G YRL +TS G ++ M +SVSGD LQS + D + + N M Sbjct: 196 GVSASIVNDGSGNPYRLVLTSTAGGSNSEMKISVSGDSTLQSLLAQDPAGTQN-MTEVTT 254 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 QNA T+N +A+++ +NT+S+ + + L TG+ T+T+ D + A+ +VN Sbjct: 255 GQNALATINGIAVQSPTNTLSNVVTGTSFTLAK--TGSTTVTVANDPTATTNAVNSFVNG 312 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+L ++LT S S++NG L GD + +T+ Q+ +L + + +Y++L Sbjct: 313 YNALRTQLNTLTNIDT------SNSANNGPLAGDVSTKTLINQITDVLGQAIGTGTYQSL 366 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 +G+T + DG L +D KL+AA+ S V L G G T ++ S + + T Sbjct: 367 GSVGVTMNA-DGTLSVDNTKLSAAIAASPSQVTGLFAGTGTATDSLVSVPSFTDTTQAGT 425 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 67/434 (15%), Positives = 143/434 (32%), Gaps = 5/434 (1%) Query: 34 SNQQSSFTAKLSAYGTLKS-ALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIA 92 + + T +A T+ A+ + + + F+ T S+T + A Sbjct: 246 TQNMTEVTTGQNALATINGIAVQSPTNTLSNVVTGTSFTLAKTGSTTVTVANDPTATTNA 305 Query: 93 GKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSG 152 ++ + + Q T ++ + ++ + + + Sbjct: 306 VNSFVNGYNALRTQLNTLTNIDTSNSANNGPLAGDVSTKTLINQITDVLGQAIGTGTYQS 365 Query: 153 IRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 + A + S+ N + S TGL + + D+L S + + Sbjct: 366 LGSVGVTMNADGTLSVDNTKLSAAIAASPSQVTGL---FAGTGTATDSLVSVPSFTDTTQ 422 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQ 272 + VSV Q +++ A N++ T + + + N++ + + S Sbjct: 423 AGTYAVSVTQLATQGSLSGSAAANTTIT-AGVNDTLAFNISGMAVNVTVPAGSYSASSLA 481 Query: 273 TAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 I+ +NA +L + + S G++ S L Sbjct: 482 AQIQSQINASTTLQTAKVTASVSANASGVMTITDSQFGSVSAVSVSGNGAASLMGSSPTA 541 Query: 333 VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 V+ + T + + A G + G + + Sbjct: 542 VAGLDVQGTINGVAATSSGQNLYGATGTAVDGLTVQVAGGAVGSRGTVTVQRGYAAQLNT 601 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 T+ LS++G+++ TD ++ +L+ L + R+D + A Y QF L L+ S+ + Sbjct: 602 VTTNLLSSSGMVQNETDAINNSLSSLASQISVMQTRLDNKQALYYAQFNALSALVASMTN 661 Query: 453 TSSYLTQQFENNSN 466 TS+YLT Q N Sbjct: 662 TSTYLTTQLAAIQN 675 >UniRef50_C4G7B8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7B8_ABIDE Length = 523 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 102/531 (19%), Positives = 200/531 (37%), Gaps = 79/531 (14%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA-N 61 + G+ SG+D S++ + AQ+ L I ++++ K + L + L + T+ Sbjct: 2 GVRLTGLNSGMDTESMIKKIMDAQRTKLNKIEGKRTTLDWKKEKWKDLNTKLYSLYTSKI 61 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++L + + + T+S +A+ G + I V A+ QTLT D Sbjct: 62 SSLRFSGAYTTKRVTSSDENVVKVKGDPSAVDGAHKIQVKQTAKTQTLTGAKVTDGIDKN 121 Query: 121 IATSD------SKLTIQQGG-DKDPITIDISA--------------ANSSLSGIRDAINN 159 +D ++T + G IT D A +++++ + DA Sbjct: 122 SVLTDIGFDLGEEITFKTGEWANKEITADNEAEAMASGKVHKFEINGDTTVNELLDA--A 179 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 KAG++AS + + R +S ++G NA ++S S +D + + + Sbjct: 180 KKAGINASF---DDKQKRFYFSSKESGTANAFSISESHNDVPMTSGLEKLGLAGSANFTK 236 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT--------GNQTLTITQDTSKA 271 + AQ+A V+ +SSN S + + L L+ T + T+ + D Sbjct: 237 IDAQDAIFRVDGTEYTSSSNNTS--VNGLNLTLSGTTADYDLGDAGKSVTVNTSTDVEAV 294 Query: 272 QTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLG 314 K ++ YNS++ + L + D + + L Sbjct: 295 YNNFKSFIKEYNSILKEMNELYYAGSSRGYDPLTADQKKDMSEKDIENWEKKIKDSVLRR 354 Query: 315 DSTLRTIQTQLKSMLSNTV----------------------SSSSYKTLAQIGITTDPSD 352 DS L T+ +KS + ++V +S+ YK + + D D Sbjct: 355 DSKLGTVLNAMKSAMQSSVTVGADSENKGGTKYSLASFGVMTSTDYKEKGLLHMFGDSED 414 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 G DKL AL ++ S + G + + + + ++ + ++ Sbjct: 415 GVYASKEDKLKKALTENPSETAEAL--QGIMNNLYSKMTDAMKGTSLSSAMTFYNDKEIT 472 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + N K+YN +++ +Y +QF ++ M LNS +S L+ N Sbjct: 473 QMSNTYKKEYNTLEAKLNKMEDKYYKQFAAMEKAMAKLNSQNSRLSSMLGN 523 >UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3S0_MAGSM Length = 479 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 122/500 (24%), Positives = 224/500 (44%), Gaps = 60/500 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+ SGL + I+D L +++A LT ++ + +A S Y +L+S L ++ Sbjct: 4 GSITFGGLASGLP-ADIVDQLMQSEQARLTKMNQTSNQVSATKSTYSSLESQLLALKSKA 62 Query: 62 TALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + AD F T+T+S + + +A G ++I+V LA T ++ + T Sbjct: 63 EDMQSADFFRPHTATSSDEDVATISADSDAQEGNHSITVNQLATYDTFVSKGSVTTTTAG 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA-------KAGVSASIINVGN 173 + ++D+ + G + + A +L+ I DAI N GV+AS++ G+ Sbjct: 123 L-SADTTFSFDYNGTSYSVALT---AGDTLADIADAITNTTYDNEDDGEGVTASVLYDGS 178 Query: 174 GEYRLSVTSNDTGLDNAMT-------LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 YRL + + D+G ++ + ++ D G S ++ SVA +A Sbjct: 179 N-YRLLLNARDSGTNSGASRLDLSGAADLAFDSGETITGGVTGSNDNSAWWNSVAGVDAS 237 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LTV+N+A+ +++N +SD L I ++L +TGN T++IT D +T ++ +V+++NS+I Sbjct: 238 LTVDNIAVTSTTNEVSDVLAGIKMSLK--STGNFTISITNDEETLKTNVQSFVDSFNSVI 295 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--------Y 338 ++ + + GDS R L++ ++ S SS Y Sbjct: 296 SFINN----------------NKSSFGGDSLARNTINMLRAEINTPTSDSSSPYSELSTY 339 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD------------GKKTGI 386 TL+ IGI TD S G L +D+ + A+ S + ++ G G+ Sbjct: 340 STLSSIGIKTDRSSGLLSIDSTDFSEAMSNGFSKIASIFTSKPSSADETAFETAGGNEGL 399 Query: 387 TTTIGSN-LTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + + S + T A + G+ L+ + R++ R +Q+ L+ Sbjct: 400 SYRMESLVYSLTTDTDNPFDAKSSGLQARLDSMATSIEREESRLEKVRDRLTKQYANLEQ 459 Query: 446 LMTSLNSTSSYLTQQFENNS 465 LM+ + ST S LT S Sbjct: 460 LMSQMQSTQSALTSALAGLS 479 >UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3B5_BURCC Length = 453 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 115/454 (25%), Positives = 188/454 (41%), Gaps = 41/454 (9%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS-ATTAG 88 + + +Q++ + L+ AL +FQ A LS + S A AT + Sbjct: 24 VQRLKSQKAGNAIAQAGLTRLQGALNSFQNALKGLSGVGGIVKQKASLSNQALGEATASA 83 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS 148 N +G+Y V LA A + + T L + +D+SAAN+ Sbjct: 84 NPQSGRYAFFVKQLASAHQVAFKGLSSYAAKDAGTLGIAL-----ATGESFRVDLSAANA 138 Query: 149 SLSG------IRDAINNA---KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD 199 SG + AIN A K VSASI+ + GE RL +TS TG +A++L SG Sbjct: 139 DASGNVSPAELARAINQAVDNKGKVSASIVTI-EGEQRLVLTSGGTGEASAISLDTSGIG 197 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDALENITLNLND-- 254 ++ S + A++A + V I+ SSNT + ++ +++ Sbjct: 198 D-----AALSAVLSGPPDELSMARDAIFKLGGESGVDIKQSSNTFTG-IQGVSVTFKQSM 251 Query: 255 -VTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALL 313 L I D A++ +V+AYN + + LTK D S+ G + Sbjct: 252 VEGDAPLLLDIKLDQVGTTDAVQAFVDAYNKAMGVLAELTKVNPDDP------SNAGPFV 305 Query: 314 GDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGV 373 GD+ +R +Q ++ ++L TV + + GI+ D + GKL LD KL AAL K+ +G+ Sbjct: 306 GDAGVRHLQQRMNALLRATVGE---RRMLDYGISADRA-GKLSLDTGKLNAALAKNPNGL 361 Query: 374 GALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQ 432 AL + G+ + + L +W S+ G +K + L K + + Sbjct: 362 DALFA--DPEKGVVARMDAYLKTWTSSVDGQVKRRQESAELIEQSLKKKERSLEVQYRQV 419 Query: 433 VARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 RY QFT++ L + T L N Sbjct: 420 YGRYLTQFTRVAELQKRMEYTKQLLDDLLSGNKK 453 >UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5H1_DESAP Length = 606 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 91/396 (22%), Positives = 163/396 (41%), Gaps = 49/396 (12%) Query: 102 LAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK 161 +A+ T+ + + + T Q G + T + A +L+G+ + I+ Sbjct: 221 VAEGDTVVAGYEYNTRTFDFSLT----TYNQNGTPNNRTFTVDAVTETLNGVLNRISADS 276 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 A + + R+SV++ TG +NA +GD+ G+ A G V Sbjct: 277 ALGLVAFYEGSSD--RVSVSTTRTGDNNA-----AGDEIGVGTTGFLAEVLRLGTAVEQG 329 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 NA++T+N + I +N S L N+ +L TG TLT+ DT+ I+ +++A Sbjct: 330 GTNARITLNGLDITRPTNEFS--LNNVHFSLKA--TGTATLTVRSDTAFVFQHIRGFIDA 385 Query: 282 YNSLIDTFSSL-------------------TKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 YN ++D + + T Q + +G L DS L +I Sbjct: 386 YNGILDLLNGKLQEERFRDYLPLLDDDPARERMTEKQIDQWEQKARSGLLRHDSLLSSIV 445 Query: 323 TQLKSMLSNTVSS--SSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIV 378 +L++ + VS +S L IGIT GKL +D KL A+++D GV L Sbjct: 446 NRLRTDVFTPVSGLGASLNHLVHIGITVGSFADQGKLVIDEAKLRRAIEQDPEGVARLFN 505 Query: 379 GDGKKT-------GITTTIGSNLTSWLSTTGIIKAATDG----VSKTLNKLTKDYNAASD 427 G + + + + + G A+ + + ++ L + + Sbjct: 506 QSGTTNEEQGIGHRLYGYLDTAIKQLTARAGSPTYASSYDPSWLGRQISMLDERMQRTEE 565 Query: 428 RIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 R++ RY +QFT L+ ++ +N+ S +L QQF Sbjct: 566 RLEKLEDRYWKQFTALERAISRMNAQSMWLAQQFGG 601 Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 2/130 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT- 59 M+ I G+ +GLD ++ L + + + ++ + Y + SAL F+ Sbjct: 1 MSVIRIGGLATGLDTYQMIQDLMKVHRKPVDRLRQERQVLEWRREDYRGINSALLNFRNG 60 Query: 60 ANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 ++ + F + T +S+ A +AT + A Y ++VT LA + T + Sbjct: 61 TVFSMRLSSTFLAKTVASSNPAAVTATASPGAAKADYAVTVTSLATTAYKASTGTVSASG 120 Query: 119 TAIATSDSKL 128 D+ L Sbjct: 121 ADKVDPDATL 130 >UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTR0_CHRVO Length = 451 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 106/446 (23%), Positives = 182/446 (40%), Gaps = 35/446 (7%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLFSATSTTSSTTAFSATTAG 88 T + Q S A+ A L+ AL ++++ L+ K L + + + S T G Sbjct: 26 QTQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMASVTAKG 85 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS 148 NA AG Y++ V LA +Q L T A KL GG+ + +D S ++ Sbjct: 86 NAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDKFTVKL---AGGESFDVALDGSDRDN 142 Query: 149 ----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 S S + AIN A AG +++ NG +L +++ +G N ++L +SG Sbjct: 143 DGKLSPSELALAINRASGNAGKVNAMVLNNNGVSQLVLSAGKSGEKNTISLDLSGVGDAG 202 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDV--- 255 G A + AQ+A + + N V ++ SNT D +E ++ +N V Sbjct: 203 LKSGLSAP------KELSKAQDAVVWLGGKTNGVRLQQGSNTF-DNIEGVSFTVNKVSKD 255 Query: 256 TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 T +++++ S ++ +V+AYN + + L++ S D Sbjct: 256 TDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQ-------PGSNGKPGAPFADD 308 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 S++R +++QL ++L T Q+GI DG LELD+ KL LK + Sbjct: 309 SSIRGLRSQLNAILRQPFDGV---TQGQLGIKA-TRDGTLELDSKKLGETLKATPDALDR 364 Query: 376 LIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 G + + + + G++K D + L + +A D R Sbjct: 365 FFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSEDRNQKDLGRRQDALQKTFDQTYNR 424 Query: 436 YKEQFTQLDVLMTSLNSTSSYLTQQF 461 Y QFT+L + + T L F Sbjct: 425 YLAQFTKLQSMQDQMTQTMGMLNSNF 450 >UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0V2_PSEFS Length = 467 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 127/488 (26%), Positives = 236/488 (48%), Gaps = 44/488 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GS +D +I+ SL A+K T I+ T LS+ G +++AL F+ Sbjct: 1 MAGSTVSGIGSNIDTQAIVKSLVDAEKVPKQTQINTASQKATTTLSSIGKIQAALDAFRG 60 Query: 60 ANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A ++ + F+ T ++S + T + A G + + V+ LAQA L+T+ T Sbjct: 61 ALDNMTASSSFTGLTGSSSDEKVATMTASNTASNGSFRLIVSQLAQASKLSTKNFAGGTS 120 Query: 119 TAIATSD--SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNG 174 T + +D + LTI Q G + I A ++L +RD+IN +G+SA+I NG Sbjct: 121 TVVNATDKPTTLTISQSGKNYDVNI---PAGATLQQVRDSINTQFGTSGLSANIQTDSNG 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 RL +TS G + +TLS + S G V ++AQ +++ VA Sbjct: 178 S-RLILTSTTMGTGSDLTLSGN-------------SGLDVGSTVVDHPKDAQYSIDGVAS 223 Query: 235 ENSSNTISDALENITLNLNDVTTGNQT-------------LTITQDTSKAQTAIKDWVNA 281 + +N I AL + + L V+ +T++ + + ++ +K ++++ Sbjct: 224 VSKTNNIEGALSGVNIKLLSVSATKTVGDTSDTAERTATLITVSTNNTALKSGVKGFIDS 283 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+LI ++ TK T G S++ AL GDST+R++Q +++ + + ++K+L Sbjct: 284 YNALITAMNAETKITKNLDG----STTAAALTGDSTMRSLQASIRNEFNTISGTGTFKSL 339 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-T 400 AQ G++T + G L +D K AA K +A+ + ++ G K G+ + S + + Sbjct: 340 AQFGVSTSSTTGLLTMDDKKWDAAAKTNAADINSMFTG---KNGMLARMKSATDDFAKAS 396 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 TG++ + +S +L L+K + ++R+D +++ +D L+ L S+ + Sbjct: 397 TGVLATRSTSLSDSLKDLSKQQDTLNERMDLLTKSLSDKYNAMDTLVAQLRQQSTSVMTT 456 Query: 461 FENNSNSK 468 +N K Sbjct: 457 LNALNNPK 464 >UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4T2_9NEIS Length = 444 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 113/465 (24%), Positives = 197/465 (42%), Gaps = 40/465 (8%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 ++ + + L + +S Q SS A+ L+SAL F++A T+LS Sbjct: 4 INPTQMATQLANLYVQQAQQRLSMQNSSAKARSDGLSKLQSALQDFRSALTSLSAKKSMV 63 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 A S + S + A + + +G A AG Y++ V LA AQ L S LT+ Sbjct: 64 AMSASFSQSNAGTVSASGTAQAGSYSLFVEQLASAQQLAYDGVS-------GASGGTLTV 116 Query: 131 QQGGDKDPITIDISAANS------SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTS 182 GG+ P ++D+++A+ + S I AIN A AG +++ NG RL +TS Sbjct: 117 SLGGN--PFSVDLASADRDGDHNLTTSEIALAINQAAGNAGKVNAMVLTANGISRLVLTS 174 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAIENSS 238 TG N + + S + +S AQ+A++ + V ++ +S Sbjct: 175 GKTGAANTIGVDASQASDPALQTAFASS------SQLSPAQDAKVWLGGQGSGVLMQQAS 228 Query: 239 NTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 NT + A++ +T+ ++ G TL + + S ++++V+AYN+L+ + SLT Sbjct: 229 NTFT-AIDGVTMTFGAMSAGQSLTLNVARSDSDTGGNVQNFVDAYNTLLKSLGSLTA--- 284 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 +G + G D+ +R+++ L +++ + LA +GIT DG L L Sbjct: 285 --SGGADKDQKAGPFATDAGVRSLRDHLNTLIRQSFGGV---RLADMGITA-ARDGTLSL 338 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D KL L + + G + +++G+I D + N Sbjct: 339 DRSKLDKLLADQPTALDGFFNGSNADGLLAQAGSYLDKWLNASSGLITQRKDSAQRMQND 398 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 L ++ D RY QFTQL + ++ T L F Sbjct: 399 LDAQQTRIDNQYDQAYKRYLAQFTQLQTMQAQMSQTLDSLNSYFS 443 >UniRef50_B2A823 Flagellar hook-associated 2 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A823_NATTJ Length = 531 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 95/525 (18%), Positives = 183/525 (34%), Gaps = 74/525 (14%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ +G D +++ L ++ + A+ + L+ + Sbjct: 1 MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSG 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 L D F +S+ + A+ Y + AQ Q L + T ++ + Sbjct: 61 LQSEDTFQGMEASSTNENIEVSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDG- 119 Query: 124 SDSKLTIQQGGDKDPITIDISAANSSLSGIRDA--------INNAKAGVSASIINVGNGE 175 LT G ++ I +D + ++ I D ++ + A++I E Sbjct: 120 HKGTLTFDFGDEEFDIKVD---ESDTIQDIADKINNNEIENNDDKTIPMGATVIAGEYLE 176 Query: 176 YRL--SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME------------VSVA 221 + + + DN GD L ++ DA ++ E Sbjct: 177 FNIDEGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQE 236 Query: 222 AQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGN----QTLTITQDTSKAQTAIK 276 +QNA++ VN + IE+S+N I A + + ++++ T + +T++I+QDT ++ Sbjct: 237 SQNAKVIVNGIQGIESSTNEIEIA-DGVEVDISAATESDMEIQETISISQDTETLINNVE 295 Query: 277 DWVNAYNSLIDTFSSLTKYT--AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 + YN I T T D + +G L GDSTL I L+ +++ V Sbjct: 296 SFEENYNEAISAIEDKTDVTVLEDDTQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVD 355 Query: 335 SSSYK-----------TLAQIGITTDPSD-----------GKLELDADKLTAALKKDASG 372 S A GI +L +D D+L L+++ Sbjct: 356 VSDQDIEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTIDYDRLEEQLQENPEA 415 Query: 373 VGALIV--GDGKKTGITTTIGSNLTSWLSTT----------------GIIKAATDGVSKT 414 V AL G+G GI + L + +I+ + Sbjct: 416 VQALFANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANE 475 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + + + DR + + + QFT ++ + S + S L Q Sbjct: 476 IERTESRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQ 520 >UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1R6_DESAD Length = 577 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 102/411 (24%), Positives = 178/411 (43%), Gaps = 50/411 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+ G+GSG D S++D L ++ + + + +SS++ K+ + L +AL QT Sbjct: 7 GNINFTGLGSGTDFQSLIDGLIKLERVHINRLESWKSSWSDKVEKFQELNTALLGLQTTL 66 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ D F S T TTS + +AT + A+ + I + LA T + + Sbjct: 67 KSMDTLDEFMSKTVTTSDSGTLTATASAEALVSSHAIEIGQLATNDIHVTDSGVSSLTES 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN---NAKAGVSASIINVGNGEYR 177 I +S + T G + IT+ +A +SL G + IN +++ + A+ IN G Y Sbjct: 127 IFSSTGEFTFTYG--SETITLSNISAGTSLQGFVNLINSHVDSREKIRATTINDGT-SYH 183 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L + D G DN +T+ + + N + + A N+Q+ V+ Sbjct: 184 LQIYGLDLGADNQVTIDNTVG----------MVFTKNDFDETQNAVNSQIKVDGYPPAPG 233 Query: 233 -AIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 IE +NTISD ++ +TLNL + QT + I D + ++ +V+ N + Sbjct: 234 DWIERDTNTISDVIDGVTLNLKNTNAAGQTTAIGIVTDKEGMKENVQKFVDQNNEIRQMI 293 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ-TQLKSMLSNT--------------VS 334 LT T S S+ L G+ + + ++K ++++ + Sbjct: 294 KDLTSVTTS-----SDSAKGSILTGNYGVELLVGQRMKDIIASKGIGFSWYEELPNGDFT 348 Query: 335 SSSYKTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD 380 Y L+Q+GI T+ G LELD +KL AL D V L + Sbjct: 349 GDRYSALSQLGILTNADSGGANMGLLELDTEKLNEALDADPMSVAMLFAAN 399 Score = 41.2 bits (95), Expect = 0.094, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G T + L +G ++ D + + K + DRI + E++ +LD Sbjct: 495 GKTGEMVEALEDMTGESGPLEILQDNYDTIMRNIDKKIESEEDRIALKKRMLTEKYARLD 554 Query: 445 VLMTSLNSTSSYLTQ 459 L+ + S+ LT Sbjct: 555 ALLGNYQGKSAQLTA 569 >UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UA93_9DELT Length = 570 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 105/459 (22%), Positives = 189/459 (41%), Gaps = 51/459 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+GSG D + ++D L ++ +T + +SS+ +K + +L + + + +T Sbjct: 9 GSINFTGLGSGTDFNKLIDGLIDVERTRITRLETWKSSWKSKNDQFASLNTQMLSLKTTL 68 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F + TSS TA +A+ A+ +I + LA T + KTA Sbjct: 69 EDFDTINEFLKKTVTSSDTARLTASAESTAMEANTSIEIGQLAANDVHITASGTSSLKTA 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINVGNGEYR 177 I +S++ T G TI+ A ++L G + +NN ++ + AS + G+ Y Sbjct: 129 ITSSNTSFTFSYAGKSY--TINDIPAGTTLEGFVNLVNNHPDSRNLIRASTVYDGS-VYH 185 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L ++ G N + +S G + S A NAQ+ VN Sbjct: 186 LQLSGMGQGSKNQLVISDDGGLIFG----------GSDFLQSQEAVNAQIRVNGFPSAGG 235 Query: 233 -AIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 IE SSNTI+D LE +TLNL + G LT D S + +K +V+A N++ Sbjct: 236 GWIERSSNTINDVLEGVTLNLREAEVGKTIKLTTATDASGIKDTVKKFVDAVNTVRAQII 295 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-----------SNTVSSSSYK 339 +T D+G ++ L G+ + I ++K++ ++T++ Sbjct: 296 KITSVEEDDSG----KATGSLLTGNYGVDMIAQKIKNITAEMGLGFTPWDADTMTGDRLS 351 Query: 340 TLAQIGITTDPSDGK-----LELDADKLTAALKKD-ASGVGALIVG------DGKKTGIT 387 L+Q+GI TD G L++D + A+K++ + L + Sbjct: 352 ALSQLGIMTDAEQGSPTYGLLKIDEEVFDKAMKENDPEDIAKLFSAKNFGESQSTDFTFS 411 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAAS 426 + I I+ + +S T+N + Sbjct: 412 SLIEGTTKPGAYDVKIVSDGSKIISATINGEEASIDGWE 450 >UniRef50_A3WGR1 Flagellar hook-associated protein 2 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGR1_9SPHN Length = 477 Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 98/486 (20%), Positives = 192/486 (39%), Gaps = 40/486 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS+ G GSG+D + D L+ A A + + + A++S+ L++ALT +A Sbjct: 9 ISAFGAGSGVDFVQLADQLSEATYAFQRSNLETRNQGLEARISSASLLRNALTQLSSALG 68 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIA-GKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + + + S +T + G Y++ V+ LA +Q L ++ Sbjct: 69 DRVRTGELAPRANVSDPAIVDVSTTSGVVPRGSYSLEVSQLADSQLLISQAYTSGDDL-- 126 Query: 122 ATSDSKLTIQQGG-DKDPITIDIS--------AANSSLSGIRDAINNAKAGVSASIINVG 172 + L I+ G + T D A+ ++ + I++A G + + G Sbjct: 127 -VGEGTLRIRFGEVNGATFTEDAGQAALEIAVDASDTVQTLAAKISSASGGALQAYVAEG 185 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-----ASSNGMEVSVAAQNAQL 227 NG +L + D G N + + L + D + +++ ++ +A++A Sbjct: 186 NGGAQLVIKGED-GASNGFVVEATSAALLPTATPGDLTYLAWDPATDAGQLRQSARDALY 244 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T++ V + SNT++D E ++ +L G T+T + DTS + D++ A N L Sbjct: 245 TLDTVEYSSPSNTVTDLPEGLSFDLKATNVGAPTTITFSNDTSAITDVMNDFLVALNDLA 304 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLA 342 A+ + G L D R ++ L + + V + TLA Sbjct: 305 GLL------------AEEATPLGGTLGNDPGARELKRDLARLTNEVVMPGAAPGEPSTLA 352 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 +G+ T +G+ ELD ++L L + A+ T + + S G Sbjct: 353 DLGLKT-TREGRFELDTERLNETLSNNPEAAAAMFTTGPFGLFATIDRLARDNTTRSDPG 411 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + + + + + + +++ + R + +++ ST S+L QQ E Sbjct: 412 SLAGSVSRYEAQVERNSDKLDRIAEQQENLRERLTRDLVAAERRISASQSTLSFLEQQIE 471 Query: 463 --NNSN 466 N SN Sbjct: 472 AWNGSN 477 >UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKF6_MOOTA Length = 632 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 113/408 (27%), Positives = 181/408 (44%), Gaps = 57/408 (13%) Query: 90 AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS-DSKLTIQQGGDKDPITIDISAANS 148 + G + SV + T T + T +A TI G + ITI+ N Sbjct: 241 TLNGDFGASVIPMLADWTATFQPAEPVTSDTVALGLSGSFTITVGSETRNITIN---END 297 Query: 149 SLSGIRDAINN----------AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 SL I IN A V+AS+I+ +RL +TS TG + A++ S D Sbjct: 298 SLQSIASLINAVPSEGETGPGAGDIVTASVID-----HRLVITSKTTGSNGAISFS-DPD 351 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG 258 L DAS V A++A TV+ + I S+NTI+D ++ +TLNL VT Sbjct: 352 GVLNKLGLVDASGVILPRAVIQDAKDAVFTVDGLTITRSTNTITDVIQGVTLNLLAVTDT 411 Query: 259 NQT----------LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSS 308 N L I+ DT KA AI+ V+ YNS+++ S+ ++ Sbjct: 412 NGNGTIEPAETLNLEISHDTQKAVDAIQAMVDQYNSVMEFIST-------------KAGD 458 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD----------PSDGKLE 356 G L GD TL + L ++++ V+ +Y+T IGI+T +GK+ Sbjct: 459 KGDLQGDPTLARFKNDLWQLMTDRVAGLTGTYQTPWSIGISTGAVVGSGSLTFDRNGKIT 518 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTL 415 LD KLT+AL+ D + V A+ + +TG+ + S LTS + S GII + + + Sbjct: 519 LDTTKLTSALETDPTAVMAIFT-NSSETGLVDKLDSYLTSLVRSGDGIIPSREQSLQNIM 577 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + DR+ + + + QFT ++ + +L S ++L Q Sbjct: 578 DDIDDQIARMEDRLTMREEQLRRQFTAMEQALAALQSQGNWLAGQIAG 625 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 7/198 (3%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS I G+ SGLD SI+ L ++ LT + +++ + + +A+ + + L++ Q+ Sbjct: 1 MASGIYFSGLASGLDTESIITQLMDLERIPLTRLQQRKNQYNVEKNAWHDIYTRLSSLQS 60 Query: 60 ANTALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L A F+ TSS T A +AT A NA AG Y +S+ LAQA + ++ T+ Sbjct: 61 KLGDLKLASTFTGMKATSSNTLALTATAASNAPAGSYQVSIIQLAQAHKVASQNLVYGTE 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV-GNGEYR 177 + T T + + + +G+ + A ++++ INV R Sbjct: 121 AQLLTD----TFTDATYTSSVATLNNLTQDTANGLLKLASGATGSITSNAINVNAANGGR 176 Query: 178 LSVTSNDTGLDNAMTLSV 195 L++T N NA + Sbjct: 177 LALTVNQQERLNANYVYQ 194 >UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Campylobacter RepID=FLID_CAMJE Length = 642 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 191/448 (42%), Gaps = 62/448 (13%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 S+SSLG GSG+ +D L A+ KA + P + + T K +K+ L +FQTA Sbjct: 4 GSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQTA 63 Query: 61 NTALSKADLFSATSTT---SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 ++L+ A +F+ S S T I+VT LAQ ++ +D Sbjct: 64 VSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLANDG 123 Query: 118 KTAIATSDSK--LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGNG 174 A + LT G + +T+D N++ + D IN A G + A I+N G Sbjct: 124 GFVNAQLNGTADLTFFSNGKEYTVTVD---KNTTYRDLADKINEASGGEIVAKIVNTGEK 180 Query: 175 --EYRLSVTSNDTGLDNAMTLSVSGDDALQSFM--------------GYDASASSNGMEV 218 YRL++TS +TG D+A++ D+ + G D SAS + + Sbjct: 181 GTPYRLTLTSKETGEDSAISFYAGKKDSNGKYQKDINAEKIFDDLGWGLDVSASIDPDKD 240 Query: 219 ------------SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQ 266 AQNA+ T++ + + SSNT++D +TL LN TG + Q Sbjct: 241 KKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNK--TGEINFDVQQ 298 Query: 267 DTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK 326 D A++D V+AYN L+ ++ T Y +S++ + G L G S + +I++ + Sbjct: 299 DFEGVTKAMQDLVDAYNDLVTNLNAATDY-------NSETGTKGTLQGISEVNSIRSSIL 351 Query: 327 SMLSNT--------------VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASG 372 + L ++ V++ ++ G++ + + G L D+ K +K+D Sbjct: 352 ADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDA-GTLSFDSSKFEQKVKEDPDS 410 Query: 373 VGALIVGDGKKTGITTTIGSNLTSWLST 400 + K I T T LS Sbjct: 411 TESFFSNITKYEDINHTGEVIKTGSLSK 438 Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 GI + + + L G I + ++ + L ++ ID + Q+ Q + Sbjct: 558 GIFSKLKATLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYE 617 Query: 445 VLMTSLNSTSSYLTQQFENNSNS 467 ++ LN + +T +NS Sbjct: 618 SILNKLNQQLNTVTNMINAANNS 640 >UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei group RepID=A3NFW3_BURP6 Length = 441 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 115/449 (25%), Positives = 182/449 (40%), Gaps = 46/449 (10%) Query: 32 PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAF-SATTAGNA 90 + Q + A L S LTTF+ L + T S AF S T A Sbjct: 25 QLERQANDVKRNKDALSGLGSLLTTFRDKQRELVAGGSMIQNTVTQSNDAFASVATTSGA 84 Query: 91 IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA---- 146 G Y V LA A LT + KL D T+D++AA Sbjct: 85 KPGSYQFHVEQLATAHQLTIDVPSGIPAADAGSVKIKL-----ADGSEFTVDLTAAKGED 139 Query: 147 -NSSLSGIRDAINN---AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 N S + IN+ A V A++I +L +TS +TG D+ ++ + L Sbjct: 140 GNVSAEELARVINSSSGASGNVHAAVI-----GGQLMLTSANTGADSKISFEIDSTSPLA 194 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDVTTG 258 +G AQNA++ + N IE NT+ D++E +++ V +G Sbjct: 195 GAF--------DGAVTISEAQNAKVKIGDPTNGKTIELQGNTL-DSIEGLSITFRQVGSG 245 Query: 259 NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTL 318 T+T+ D K ++K +++AYN LID + LT+ G G D+ + Sbjct: 246 --TITVASDKEKTTESVKAFIDAYNELIDKLAELTRVGDAAKGDP-----GGPFSSDAGV 298 Query: 319 RTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV 378 R + +QL+S L+ +V L ++GI TD GKL LD + A K L Sbjct: 299 RALVSQLRSELNKSVDGVK---LYELGIDTDKK-GKLVLDEKRFEQAFKASPDRFDKLFG 354 Query: 379 GDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 +TG+ +G L WL+ G +K + V++ +L R RY Sbjct: 355 --DAQTGLVGNLGKALDGWLNEKNGQLKTRNESVAQAEKQLLAKQQEYDRRYQDVFERYT 412 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ++FT+L VL +++T + F + + Sbjct: 413 QEFTRLQVLQLQMDNTLDQIKNLFSTSKD 441 >UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWM3_9GAMM Length = 644 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 129/387 (33%), Positives = 221/387 (57%), Gaps = 20/387 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+S G+ SG+D+ S++ +L+AA + +T + Q+ S+ LSA+GTL+S+L++ Q+A Sbjct: 2 SVSLSGLVSGIDVQSLISNLSAAYQQPITLLQKQEQSYQTSLSAWGTLQSSLSSLQSALG 61 Query: 63 ALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL + S + S+ +A+ A G Y++S LAQ+Q++ + + + TA+ Sbjct: 62 ALQNLGSSNNRSVSLSNAGVATASVTNGAQLGSYSLSNIVLAQSQSIYSSSFASASNTAV 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T ++ + G I I+ N +L+GI AIN A GV+A++IN G+G YRL++T Sbjct: 122 GTGTLQIQVGSGAVS---NIVINGGNDTLNGIASAINQANLGVNAAVINDGSG-YRLTLT 177 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 TG++NA T++VSG + + Y A S GM +S AAQNA L++N +A+ +SSNT+ Sbjct: 178 GTGTGVNNAFTVAVSGASGSLAELSYSPGA-SGGMTLSQAAQNASLSINGLAVTSSSNTV 236 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 S A+ +TLNL T+G+ TL ++ S +A++ + +A+N + T + LT Y Sbjct: 237 SGAIPGVTLNLQ--TSGSTTLQVSASNSAFVSAVQSFTSAFNKTMGTINQLTAY------ 288 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQIGITTDPSDGKLEL 357 ++Q+ S G LLG + ++ ++TQL +++S + S+Y +L +G+ S G + L Sbjct: 289 -NAQTGSGGPLLGSAAVQGLRTQLLNLISGPGLGVSAGSAYNSLGAVGLGLTSS-GTITL 346 Query: 358 DADKLTAALKKDASGVGALIVGDGKKT 384 + L+ AL D V L G + Sbjct: 347 NTGTLSTALNSDYQTVLGLFSQAGSTS 373 >UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 Tax=Dickeya RepID=D2BX26_DICD5 Length = 484 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 182/457 (39%), Positives = 272/457 (59%), Gaps = 24/457 (5%) Query: 24 AAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS 83 + LTP + S +A+ AY +++++ + QTA T L ++T+ TS+ TAFS Sbjct: 39 TVEAQRLTPYQTKSDSLSAQAKAYSAVEASMKSLQTATTTLQNMKSITSTAVTSTNTAFS 98 Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI----ATSDSKLTIQQGGDKDPI 139 A+T A+AG Y+I V +LAQAQ+ + + + +++ S +TI Q P+ Sbjct: 99 ASTDSTAVAGTYSIFVNNLAQAQSQISGAFSSASTALVSGGTSSTSSTITISQSSQSTPL 158 Query: 140 TIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD 199 TI ++ +SL+ IRDAINNA GVSASI+N G Y L +T+ DTG +AMT+SVSG+ Sbjct: 159 TISLTDDKTSLNDIRDAINNAGGGVSASIMNNGTSNY-LMLTAKDTGTKSAMTISVSGN- 216 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT--- 256 S+S VAA++A T+N +++ + SNT++ A+ +TLNL + Sbjct: 217 ---------LSSSLGSFTEQVAAKDASFTLNGMSVTSQSNTVATAITGVTLNLKAASATG 267 Query: 257 TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA---VDAGADSQSSSNGALL 313 + + L+I+ D + Q AI++WV AYN+++DT + T Y D +QS+SNGAL+ Sbjct: 268 SSAENLSISSDATGTQQAIQNWVTAYNNVLDTIKTQTNYNPPSATDTSNGTQSASNGALV 327 Query: 314 GDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDP-SDGKLELDADKLTAALKKDAS 371 GDST+RTIQ QL+S+++N + S T+A +GIT DP ++GKL +D KLT LK A Sbjct: 328 GDSTVRTIQRQLQSLMTNLQTGSGSLHTMADLGITQDPTNNGKLLVDNTKLTNTLKTSAG 387 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 V GDG TG T G+ L+ L + G+IK+A G+ + +TK + D ID Sbjct: 388 SVTTFFTGDGSTTGFATQAGNYLSKTLDSSDGLIKSAQAGIKTSQATVTKQLASIQDSID 447 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 A + RYK QFTQL+ L++ L+STSSYLTQQF S+S Sbjct: 448 ATMNRYKTQFTQLNTLLSKLSSTSSYLTQQFNKTSSS 484 >UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8H4_KINRD Length = 523 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 127/527 (24%), Positives = 223/527 (42%), Gaps = 71/527 (13%) Query: 1 MASISSL---GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 M++ISS G+ SGL SSI+ SL A AT T + + SS K++AY ++ S + Sbjct: 1 MSTISSSSVDGLVSGLQTSSIISSLIAVDSATQTRLKSSVSSTQLKITAYQSVSSKMLAV 60 Query: 58 QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 Q A T L A ++ T TSS + + +T A AG + SVT +A +T+T+ Sbjct: 61 QEAATKLQAATAWTPTKATSSDKSVAVSTTEAASAGSVSFSVTGVAAGRTVTSAIFNSKA 120 Query: 118 KTAIATSDSKLTIQQGGD------KDPITIDISAANSSLSGIRDAINN-AKAGVSASIIN 170 A ++LT GG D + I+ ++ L + A+N+ A G+ A I Sbjct: 121 ----ADKGAELTSALGGSPLDVVRSDGKFVTITPSSGDLEAVAKAVNDAADLGIKAVAIR 176 Query: 171 VGNGEYRLSVTSNDTGL-DNAMTLSVS-------GDDALQSFMGYDAS------------ 210 VG+G+YRL +TS TG + + S G D +G+DA Sbjct: 177 VGDGQYRLQITSTKTGASEGDFKIVPSVGGNASTGRDGKLREVGFDAQDFADLNVQDVTR 236 Query: 211 ASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT---------GNQT 261 G S + + L + + +NT SD + ++ ++ + T Sbjct: 237 TGGTGYTASSSKDASILLATGDPMTSPTNTFSDIIAGLSFTVSAESPFKADAPTEREKAT 296 Query: 262 LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTI 321 +++ +++ ++K V+A N+ +D + ++ A AD + G L GD LR++ Sbjct: 297 VSVAPNSAAVAASMKALVDAANAALDDVALQSR--AASVSADGSVTGGGTLRGDPALRSL 354 Query: 322 QTQLKSMLSNTVSSSSYKTL-AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV-- 378 ++Q+ ++ ++++ T A G+ DGKL AA +KD +G+ L+ Sbjct: 355 RSQIIEAVTGNITATGINTSAASFGVE-STRDGKLVFKEGSFLAAYEKDPTGLKDLVAKR 413 Query: 379 -----------GDGKKTGITTTIGSNLTSWLST-----------TGIIKAATDGVSKTLN 416 D K GI T + + + + G I + ++ Sbjct: 414 STTVVDGKTVVADDGKDGIATRLRNVVDQAIGRKEDTAIGLKALDGTITQIITNQNISIA 473 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 L ++ + A Y++ + L+V + L S SS+L Q N Sbjct: 474 DLKNRIADWDVKLKDKQAYYQKYYGALEVQLGKLQSQSSWLAGQLSN 520 >UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMG3_ACIBL Length = 446 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 123/467 (26%), Positives = 214/467 (45%), Gaps = 36/467 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 +SL G G D+ S+++ + AQ+ +QQ+ + SA ++S + TF TA+T L Sbjct: 8 TSLYSGKGFDVQSMVNQILNAQRTQEDQWKSQQTLVQNQTSALTAIQSEIGTFYTASTNL 67 Query: 65 SKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + + L + +++S T A AT A GK+ ++V LA + + Sbjct: 68 TDFNGVLGAKIASSSDTGALVATADSYATTGKHVLAVEQLATTGSAYSTAIASGDSLDSG 127 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 D + T+ + NS+LS + DAIN GV+A++ G RL++ S Sbjct: 128 CFDLTV------GSTTKTVTLGDDNSTLSDVADAINKLGMGVTAAVQTDAAGS-RLTIVS 180 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 N +G A+++S +S QNA + V+ V E++SNT+ Sbjct: 181 NTSGSAGALSIS---------------GGTSQLSFNVTKGQNAIVDVDGVPYESASNTVD 225 Query: 243 DALENITLNLNDVTT-GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 A+ +TLNL TL+++QD ++ AI DWV++YN+L+ + ++ Y Sbjct: 226 GAISGVTLNLATANPDKQVTLSVSQDATQVAQAIGDWVDSYNALVKSVNTQFSY------ 279 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDAD 360 +S ++ GAL GDS+LR +Q L + ++ Y TL IGI + DG L +D+ Sbjct: 280 -NSTTNRAGALSGDSSLRLLQDSLLHLAPFSMDGNGDYGTLRSIGIDME-DDGTLSVDST 337 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 L AL S + + G+ ++ L S T G I + +T LT Sbjct: 338 TLNDALANHFSNLTSFFQGENSFGTTLSSAAQMLES--PTVGPISLDLQTLRQTNQDLTN 395 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + + R+ +Q Q++Q++ + L S + ++Q ++ S S Sbjct: 396 EISDFETRLASQQQTLLLQYSQINAALQELPSLQNQISQMLDSTSIS 442 >UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FN2_THICR Length = 781 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 119/384 (30%), Positives = 182/384 (47%), Gaps = 28/384 (7%) Query: 11 SGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 S D+ ++ +L A+ A + T +L A+ L++ L F + T LS L Sbjct: 16 STFDIGNMSKALATAEVAGPKAILERNVEKVTTELDAFKYLQTNLEAFNSYVTDLSSPTL 75 Query: 70 FSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 FS +T+SS T S T +A Y I LAQA T+ ++T L Sbjct: 76 FSQKNTSSSNETLVSVTATNSAALASYQIESRQLAQAHTMVANKGFTSPSDTLST--GTL 133 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLD 188 TI GG IT+D A+N++L G++ INN GV+ASIIN G G Y++ TS ++G Sbjct: 134 TIDVGGQVSNITVD--ASNNTLEGLQKVINNGDYGVTASIINNG-GSYQMMFTSKESGAA 190 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENI 248 T+S D +NG + AQ+A + +N V + NS+NT ++ + Sbjct: 191 GEATISGIAD------------FDTNGFTTTSQAQDAVMVLNGVTVTNSTNTFDQVIDGV 238 Query: 249 TLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSS 307 T LN + G T+++ QD+ + I +V+ YN L L KY D + +S Sbjct: 239 TFQLNSASIGTTSTVSVGQDSQSVKDTITSFVDVYNQLDTILDELGKYDTSDLTEEELAS 298 Query: 308 SN----GALLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIGITTDPSDGKLELDAD 360 G L G+S LR+++ Q++ +S +S SY++LA IGI DG LE+D+ Sbjct: 299 EEYKYYGDLAGNSLLRSVKYQIRESMSGAISQLAGGSYQSLADIGINF-TRDGALEVDSA 357 Query: 361 KLTAALKKDASGVGALIVGDGKKT 384 KL AL D S + + G Sbjct: 358 KLDTALSTDMSALSTMFAKGGTSD 381 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 148/440 (33%), Gaps = 53/440 (12%) Query: 49 TLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL 108 L +AL+T +A + + F+ T+ + + G Y +++T LA T+ Sbjct: 358 KLDTALSTDMSALSTM-----FAKGGTSDDALVNVLSGSDKTQTGDYALNITQLADRATV 412 Query: 109 TTRTTRDDTK------------TAIATSDSKLTIQQGGDKDPITIDISAANSSL---SGI 153 T T T+ T D+ + + TI++++ + + Sbjct: 413 TGGAVTGLTTDEQVAGDRISDLTSALTIDASASFDLNVNGTVNTINLASVAQTYATKDEV 472 Query: 154 RDAIN---NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS 210 AI +A G I+ + + R + + T+ ++ + S G+ A+ Sbjct: 473 ATAIQGQIDAAFGAGVVAISYDSAQSRFELNA----AAGQGTVDIASTTGM-SNQGFGAA 527 Query: 211 ASSNGMEVSVAAQNAQLTVNNVAIENSSNTISD---ALENITLNLN-------DVTTGNQ 260 + + + A +A V S+ T++ ++ + L + DV Sbjct: 528 TYAGQQLLDLGATDATFNVKIDESTTSAVTVTAGRYTMDELALTMASTINNNADVKASGA 587 Query: 261 TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT 320 +++T D S + N + F++ D+ + D TL T Sbjct: 588 EVSVTHDGSAFTVTSTRFGGFSNVELTGFANFAAAGFTTDVLDAGQNV------DGTLTT 641 Query: 321 IQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD 380 L + + ++ + + + ++ + G Sbjct: 642 ASGSLNIGAYASATDGRQVKISDYAM--------ISGNEAEVRGLEFEVIGGTTGARGTI 693 Query: 381 GKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 G + + + + TG++ ++ L++ + R + +A+Y+ Q Sbjct: 694 SYSEGYASQLETTINDLFKADTGLLSTRMSNLNDRLDRYDEKTKDIDTRYEKLLAKYQMQ 753 Query: 440 FTQLDVLMTSLNSTSSYLTQ 459 F+ L L+ S T + LT Sbjct: 754 FSMLQSLINSSEQTRNMLTA 773 >UniRef50_C4L5M8 Flagellar hook-associated 2 domain protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L5M8_EXISA Length = 549 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 112/548 (20%), Positives = 207/548 (37%), Gaps = 93/548 (16%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANT 62 I G+ SG+D SI+ + A++ + + ++ + +Y + +L + +A Sbjct: 5 IRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRNSAVD 64 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT----RTTRDDT- 117 + + ++ T+++S + S ++ TI+ LA + + +DT Sbjct: 65 MMFSRNYYAKTASSSDESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGITNDTA 124 Query: 118 -----------KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDA---------- 156 K I ++LT++ + P D +L+ DA Sbjct: 125 VSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTDKDGNAITLAHTYDAATGKITFDSG 184 Query: 157 ------------------INNAKAGVSASIINVGNGEYRLSVTS------------NDTG 186 N G ++ N +++ VT+ ++T Sbjct: 185 VTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFFDETS 244 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALE 246 ++T +G+ ++ F G A A G+ VA NA + VN + + SSNT + ++ Sbjct: 245 GKISLTRKNTGEQSIIEFEGTAAKALF-GLNGFVAGTNASVDVNGITLTQSSNTFT--ID 301 Query: 247 NITLNLNDV--TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK---------- 294 N+T+ L L+ DT K IK +V+ YN ID + T+ Sbjct: 302 NMTITLKSSFNDGTKVNLSAATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAPL 361 Query: 295 -------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS---SYKTLAQI 344 + + + + +G L GD+ LR L+S S SS+ L QI Sbjct: 362 TQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLRSKWSGATSSTNDLDMSRLFQI 421 Query: 345 GITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 GI+T + GK+EL+ +KL AA++KD V L +TG+ I T Sbjct: 422 GISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFT--DAETGLLPQIRDAAKDSRDTI 479 Query: 402 GIIKAA------TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 I A T + K + + +D + + Y +FT ++ M N+ ++ Sbjct: 480 TRIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAA 539 Query: 456 YLTQQFEN 463 L+Q Sbjct: 540 SLSQFLGG 547 >UniRef50_Q9X0K7 Flagellar hook-associated protein 2 n=7 Tax=Thermotogaceae RepID=FLID_THEMA Length = 608 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 193/442 (43%), Gaps = 54/442 (12%) Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNA----IAGKYTISVTHLAQAQTLTTRTTRDD 116 N+ALS A + + S +ST S T+ N I G +T V HL +A + Sbjct: 184 NSALSSAGITGSVSYDTSTGKISITSDKNFSLVDITGNFT-KVFHLDEASLNYSGGNYSF 242 Query: 117 TKTA-------------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG 163 T TA IAT SK I + + ID+ N +LS + + IN+++AG Sbjct: 243 TSTASVSGLSTAKTLQQIATYTSKTIISGKVKINGVEIDVD-QNDTLSSLIEKINDSEAG 301 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 V+AS N R+ + S +G + A+TL + L S +G + + G + + Sbjct: 302 VTASYDYHAN---RVVIISKTSGPE-AITLEDTYGTGLFSLLGIENHSLYVGQKAHL--- 354 Query: 224 NAQLTVNNV---AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 Q++++ + + +N + +T +++ +T+ T+ + DT IK++V+ Sbjct: 355 --QISMDGTNWADVYSDTNDVE--YNGVTFHISGMTSETITVDVRVDTDAIVEKIKEFVD 410 Query: 281 AYNSLIDTFSS-LTKYT---AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 +N +D + LT+ + + + G L GD L I ++L+ ++ + Sbjct: 411 KWNETMDYLNEKLTEESITDKDEEEMTEEEKMKGVLKGDDLLEEIFSRLRGFITYK-AEG 469 Query: 337 SYKTLAQIGITT--------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 L ++GI+T + G LE+D +KL +++D + V G + G T Sbjct: 470 DINYLWELGISTGDIGTGYENMMKGHLEVDEEKLKQIVEEDPNKVWEFFGG---ENGFAT 526 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNK----LTKDYNAASDRIDAQVARYKEQFTQLD 444 + L + G I G+S + + L + +R+ + +F+ ++ Sbjct: 527 QLDDYLWELVKFNGRIDQ-VAGISGRIEREQRFLATQIASWIERLSKREQELWRKFSVME 585 Query: 445 VLMTSLNSTSSYLTQQFENNSN 466 +++ L S S+++Q + +SN Sbjct: 586 EVISQLQSQGSWISQALQGSSN 607 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 112/289 (38%), Gaps = 17/289 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + G SGLD SI++++ A+ L ++ + + AY +K+ L F+ Sbjct: 18 LGGFQVGGAVSGLDTQSIINAILEAESQPLQNLTEKYEKYELMQEAYTEVKTKLREFRDL 77 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT----------T 110 + + SS++ SA + A+ G Y + + A TL + Sbjct: 78 VYSFKLQSTVVQKTAVSSSSLLSAEASSVAVTGVYHVKIVQTATYTTLAGASEVVPPPDS 137 Query: 111 RTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASI 168 T + + + + + + + + + + ++ I +N+A AG++ S Sbjct: 138 TKTFGELDYMYTPQEGTVRLYNNETGNYVEVQVLSTD-TIDDIVSKLNSALSSAGITGS- 195 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDAL-QSFMGYDASASSNGMEVSVAAQNAQL 227 ++ ++S+TS+ +T + + L ++ + Y S SV+ + Sbjct: 196 VSYDTSTGKISITSDKNFSLVDITGNFTKVFHLDEASLNYSGGNYSFTSTASVSGLSTAK 255 Query: 228 TVNNVAIENSSNTISD--ALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 T+ +A S IS + + ++++ T + + D+ TA Sbjct: 256 TLQQIATYTSKTIISGKVKINGVEIDVDQNDTLSSLIEKINDSEAGVTA 304 >UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=Pseudomonas syringae group RepID=Q48GD5_PSE14 Length = 492 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 134/493 (27%), Positives = 232/493 (47%), Gaps = 39/493 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 S+ G+GSGL +++I++ L A+KA I Q ++ TA LS L SAL FQ Sbjct: 7 STTGLGSGLAITAIVEGLVGAEKAPKQNQIDKQTAATTASLSGVSQLTSALAAFQKTLDT 66 Query: 64 LSKADL--FSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + F + TS+ A AT A+ G Y I +T LA + T +A Sbjct: 67 LGSSTTPAFQGFAATSANEAVVKATAGNTAVNGTYAIGITQLATPSKVATAALNSTQASA 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 I + L I Q G + ID S+L +RD IN++ G++A+IIN NG RL Sbjct: 127 IPS--GTLKITQNGTDYSVVID---KTSTLQEVRDKINSSLQGKGITANIINDDNGA-RL 180 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGY------------DASASSNGMEVSVAAQNAQ 226 +S TG + +++ + + G + A ++ A++A Sbjct: 181 VFSSTTTGKGSDISVVGASGQEALNIDGTKLMSDTSTGTDANGKAIPGAGAITATAKDAA 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDT--SKAQTAIKDWVNAYNS 284 TV+ +++ + +NT+S A+ +T +L T T T+T T + +++ +V++YN+ Sbjct: 241 FTVDGLSLTSKTNTVSTAISGLTFDLVAPTAAGATTTVTVATNTDGLKASLQSFVDSYNT 300 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI 344 L +SLTK + D G + AL GD+T R + ++ L++ SS+ L+Q+ Sbjct: 301 LATLVTSLTKGSISDKGVY----TAAALTGDATPRALLATIRDQLASASSSAGLSALSQL 356 Query: 345 GITTDPSDGKLELDADKLTAALKKD--ASGVGALIVGDGKKT-------GITTTIGSNLT 395 GI T S+G L LD TAAL S + + G G G+ + + L Sbjct: 357 GIKTQQSNGTLSLDTATFTAALNDKKLGSQIQTMFTGTGATNADGTVDGGLVSRMTKALL 416 Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + + G++ + T ++K ++ D +A RI + A +++ +D+++ L +T++ Sbjct: 417 PYTKSDGVLASKTSSLNKIQTRIASDQDALDRRITSLTASLTKKYNAMDLVVGQLKATAT 476 Query: 456 YLTQQFENNSNSK 468 +T FE + K Sbjct: 477 SITSIFEAMNAQK 489 >UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0K4_PSYIN Length = 447 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 104/464 (22%), Positives = 197/464 (42%), Gaps = 36/464 (7%) Query: 13 LDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS--KADL 69 +D S+ L + + T + + + K SA ++ + L+ F LS + Sbjct: 2 IDPVSMATQLASWEVYPFETSANLRLKELSGKRSALSSINTELSAFNRTLENLSGYNKTV 61 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 ++T+S +A A AG Y + V LAQ L T+ T+ + + LT Sbjct: 62 TKNSATSSDEDFLTAKAGAKAQAGNYQLFVEQLAQHHQLATQLPSGTTQDSFVPASGVLT 121 Query: 130 IQQGGDKDPITIDISA----ANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSN 183 + G+ + + ++ S + AINNA GVSAS++ + NG+ +L + + Sbjct: 122 MNINGESFTVDLAVADKVGNGELSYLDLVTAINNAPDNTGVSASLV-ISNGQIQLLFSGD 180 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSN 239 TG +N++++S S D++ +D + +SN M + +Q+A + + ++NSSN Sbjct: 181 KTGAENSVSISSSTADSV-----FDTAMNSNNMTELLKSQDAIAWLGVENSGLKLQNSSN 235 Query: 240 TISDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 + + L L +T+ I D + + V YN + T + Sbjct: 236 EMEGVFSGVDLTLKKAHQSGEAGETIIIDADKQGTKDVMDALVKQYNKIASTIDKYS--- 292 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 A +++ S GAL D T R+I+ L+ + T T+ ++G DG L Sbjct: 293 ---ATGNTEGQSRGALASDPTTRSIKNSLRGVFQQTFDGI---TMGELGFEFS-RDGTLS 345 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTL 415 D D A K + + + G+G + + L + ++G IK + + Sbjct: 346 FDGDTFEAFQKTSTADIEEIFRGEGM---FLSQLQGKLDIYNDNSSGTIKNQIESIDIQK 402 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 +++ + + + ARY +Q+T L L T +N+ S+ +Q Sbjct: 403 SRVDNKLESLDRKYENFYARYLKQYTSLSTLQTQMNNISTMFSQ 446 >UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43029 Length = 612 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 96/425 (22%), Positives = 172/425 (40%), Gaps = 63/425 (14%) Query: 86 TAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISA 145 T N+IA +SVT + +++T T+ S T + G + T I Sbjct: 206 TFANSIASGAQVSVTFIEESETEKY------------TTSSITTFDRDGKEVKDTFVIKD 253 Query: 146 ANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSV--SGDDALQS 203 + +LS + +N + GVS +G +S T +TG++N + + GD Sbjct: 254 SE-TLSQVFQKVNRSNVGVSIFYDEHNDG---VSATRKETGINNKNSGNEMVFGDGFFNE 309 Query: 204 FMGY-------DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT 256 + + A+NA T+N + + +NT + ++ +T+ L T Sbjct: 310 VLKLKENYQVVNEEGDPETRSNVQEAKNAVFTINGMETQRQTNTFT--IDGVTITLRGET 367 Query: 257 TGNQ--TLTITQDTSKAQTAIKDWVNAYNSLIDTFS------------SLTKY-----TA 297 GN+ +L ++ DT K IK +V+ YN L+D + LT + Sbjct: 368 VGNEEVSLNVSTDTDKVFDTIKGFVDQYNELLDFVNGKLTEERYRDYKPLTDEERDAISE 427 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIGITTDPSD-- 352 +A + + +G L D ++++ ++++ + VS S Y L+ IGITT Sbjct: 428 KEAERWDERAQSGMLRNDRMIQSVMDRMRTDIYGMVSNNLGSDYNQLSAIGITTSRDYND 487 Query: 353 -GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG- 410 GKLE++ D+L A+++D +GV A+ DG +G I + S I + G Sbjct: 488 RGKLEINEDRLRQAIERDPAGVAAIFNSDGPTSGEKGIIRRMRETLTSGIDSISSRAGGM 547 Query: 411 ----------VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + + + + R+ RY QFT ++ M N+ + L Q Sbjct: 548 GGKVANHQFTLGREIESINTRITNFERRLQQVEDRYWRQFTAMEKAMQQANAQAESLFAQ 607 Query: 461 FENNS 465 N Sbjct: 608 LYGNQ 612 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 69/381 (18%), Positives = 137/381 (35%), Gaps = 50/381 (13%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D I+ L A++ + + Q+ ++ AY + F+ Sbjct: 1 MRMGGLASGMDTEQIMRDLMRAERMPVDNMVKQRQVVEWQMDAYREVNRKFNEFRNKMVD 60 Query: 64 ---LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTIS-VTHLAQAQTLTTRTTRD---- 115 L+ A+L + T+S+++ SAT + ++ IS V LA+A++ + Sbjct: 61 QFILTSANLSAKRVTSSNSSLVSATASASSGNVSLRISQVNELARAESNFSAGRISGEEK 120 Query: 116 -DTKTAIATSDSKLTIQ-QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSA-SIINVG 172 DT A+ I+ + G TI S+A +S+S + +NN K A +++ V Sbjct: 121 VDTSKALKDQKFDQAIEWKDGAVKTETIRTSSATTSVSFAQGNVNNLKENAEADTVVKVN 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 EY + G N ++V +F AS + + ++ + T Sbjct: 181 GKEYEVV-----QGTPNENQVAVDYKTGTLTFANSIASGAQVSVTFIEESETEKYT---- 231 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS----LIDT 288 +S T + + + +D+ + VN N D Sbjct: 232 --TSSITTFDRDGKEVKDTF-----------VIKDSETLSQVFQK-VNRSNVGVSIFYDE 277 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI---- 344 + T + G ++++S N + GD + +LK +T + + Sbjct: 278 HNDGVSATRKETGINNKNSGNEMVFGDGFFNEVL-KLKENYQVVNEEGDPETRSNVQEAK 336 Query: 345 -------GITTDPSDGKLELD 358 G+ T +D Sbjct: 337 NAVFTINGMETQRQTNTFTID 357 >UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=Campylobacter jejuni subsp. jejuni 1336 RepID=D2MS44_CAMJE Length = 647 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 111/434 (25%), Positives = 188/434 (43%), Gaps = 69/434 (15%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 S+SSLG GSG+ LD L A+ KA + P + + T K LK+ L+ FQ A Sbjct: 4 GSLSSLGFGSGVLTQETLDKLKEAEQKARIDPYTKKIEENTTKQKDLTELKTKLSAFQAA 63 Query: 61 NTALSKADLFSATSTTSSTT---AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 ++L + F+ +S T S + I+VT LAQ ++ +DT Sbjct: 64 VSSLGDSTAFAKRKVIASITDNPPASLSVTSGVALQSMNINVTQLAQKDVYQSKGLVNDT 123 Query: 118 KTAIAT--SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVG-- 172 A+ + LT G + +TID N++ S + D IN A G + A ++N G Sbjct: 124 GIINASLKEPTNLTFFSNGKEYSVTID---KNTTYSDLVDKINTATGGEIVAKMVNTGEK 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF------------------------MGYD 208 + YRL++TS +TG D+A++ D+ + +D Sbjct: 181 DAPYRLTLTSKETGEDSAISFYPGAKDSDGKYKVDENAKSVFESLGWKLDEDALKAEDFD 240 Query: 209 ASASSNGMEVS---------VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN 259 + S G+ + AQ+A+ T++ + + SSNTI+D ITL LN TG Sbjct: 241 PAKSKKGVGIIDSEDNPLHIQKAQDAKFTMDGIKMTRSSNTITDLGVGITLTLNK--TGE 298 Query: 260 QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 + QD+ A++D V+AYN L+ ++ T Y +S++ + G+L G + + Sbjct: 299 INFDVQQDSESVTKAMQDMVDAYNDLVLNLNAATDY-------NSETGTKGSLQGVTEVN 351 Query: 320 TIQTQLKSML--------------SNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAA 365 +I++ + S L N VS+ +L G++ G L D+ + Sbjct: 352 SIRSSIISALFKTQSVDGTVEDTNGNKVSAKVMLSLQDYGLSM-TESGTLNFDSSTFESK 410 Query: 366 LKKDASGVGALIVG 379 +K++ + G Sbjct: 411 MKENPDLTESFFSG 424 Score = 41.5 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 31/83 (37%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ + + L G + + ++ LT+ + ID + Q+ Q + Sbjct: 563 GVFAQLKTTLQGITGKDGSLTKYDESLTNDTKSLTQTKESTQTLIDTRYDTMANQWLQYE 622 Query: 445 VLMTSLNSTSSYLTQQFENNSNS 467 ++ LN + +T +NS Sbjct: 623 SILNKLNQQLTTVTNMINAANNS 645 >UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8AKF6_CITK8 Length = 442 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 129/470 (27%), Positives = 220/470 (46%), Gaps = 51/470 (10%) Query: 11 SGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 S D +++ L A T + +Q S+ A+ A +L++AL+ F++A T L+ + Sbjct: 2 SDFDPTTLATQLAGYDILALQTSLKSQTSTLEAQKKALSSLRTALSDFRSAITGLNSSST 61 Query: 70 --FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 T+T + + T + +A G Y+++VT LA AQ + AI + Sbjct: 62 SVLKNTATMNQEGIATITASASARKGTYSLNVTQLASAQQ---KGFDGLDDEAIKNASGT 118 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--------------AGVSASIINVGN 173 L I G+ I +D SL+ DAINNA GV+AS++ + + Sbjct: 119 LKINLNGESLEIEMD---DLDSLADFADAINNADFPSASDTATSDDGQNGVTASLMRI-D 174 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 G+ L ++S+ +G + L SG Q NG V A ++A+ TV + + Sbjct: 175 GKVTLMMSSDQSGEKYDIQLDTSGMTNGQDIF--------NGENVITAGKDAKFTVGDSS 226 Query: 234 IENSS--NTISDALENITLNLNDVTTGNQTLTITQDTSKA--QTAIKDWVNAYNSLIDTF 289 SS NT+ + ++ +++ L T N+ L I+ DT + I+ +++AYN+L DT Sbjct: 227 TVYSSSSNTLDNLVDGVSIKLTGTTEANKPLVISVDTDATGTKEQIQAFIDAYNTLQDTI 286 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 S LT S S S GA GD+++ ++ L ++L T + + + GIT D Sbjct: 287 SGLTA-------TGSSSDSRGAFAGDASISSLTNDLSNILRGTFGD---QNMTKFGITAD 336 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAAT 408 DGKL +DAD L LK + V G+ G+ + +L +L+T TG++K Sbjct: 337 -KDGKLSIDADTLNEQLKSNPQSVADFFNGN---NGLIKAMDKSLDKYLNTSTGLLKGRQ 392 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + + + + + R ++ RY +QFTQL +MT +N+T S + Sbjct: 393 ETLDRQQRDIDTKTEKMNTRYESSYNRYLKQFTQLQSIMTQMNNTMSMFS 442 >UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 Tax=Sulfurihydrogenibium RepID=B2V9J0_SULSY Length = 434 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 107/475 (22%), Positives = 191/475 (40%), Gaps = 54/475 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++ G+ +G D++SIL + A + + + QQ + K + ++S L Q++ Sbjct: 3 GELNVTGLVNGFDMNSILQQIQAIKSQQILMLQGQQQQISDKKTVISNIQSILKNLQSSI 62 Query: 62 TALSKADLFSATSTTSSTTAF---SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 +S +A S S S T N G Y I+++ LA Q + + D Sbjct: 63 NNISDPSTVNAKSVNVSNPNVLTASITDPTNVSEGIYNINISQLATNQVYASNNSFSDKN 122 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA----KAGVSASIINVGNG 174 ++ + LTI G+ I D + SL + D INN ASIINVG Sbjct: 123 ASLGLNPGTLTISMNGNSYNINYDNT---DSLQSLADKINNTASANSGNFRASIINVGTS 179 Query: 175 E---YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 Y+L ++ TG DN+ T+S +G+ + S G+ AQN TVN Sbjct: 180 SNPKYKLVISGTKTGADNSFTISDTGN-----------AVSVLGLTNIQNAQNGAATVNG 228 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 + +++ +NT ++ + ++ TG+ L I +D ++ VN YN L+DT + Sbjct: 229 LQVQSDTNTFTN-IPGLSFT--AFQTGSTVLQIQKDNKPITDTLQAIVNYYNQLVDTVN- 284 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 ++ G L G+ L I + S L ++ I D + Sbjct: 285 ------------KETGKGGKLSGEYGLNQIVNGIFSQLQPLFTADI--------INFDRT 324 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 G + L+ KL AL + + + + I + + L + GI+ Sbjct: 325 SGHISLNTSKLNDALTNNGADLQNTL------NNIKNNLTTYLNPYTQFNGILDQYNKSY 378 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + + + R+ ++ K QF Q+ +L +N S+ + F N S+ Sbjct: 379 DSQIQNIQNLIDLQTKRVQIEIETLKNQFIQMQMLQAQMNDISARIQATFGNQSS 433 >UniRef50_Q63DA1 Flagellar hook-associated protein 2 n=10 Tax=Bacillus cereus RepID=Q63DA1_BACCZ Length = 462 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 85/462 (18%), Positives = 176/462 (38%), Gaps = 30/462 (6%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S+ ++ A + TP +N+++ + Y +LKS ++F L+ Sbjct: 22 IDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 TTS + G AIAG + +++T LAQ + + +D A T++ Sbjct: 82 KVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASNEIKDIN----AKLPKDETLKL 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 G + +T D+ + + + IN+ GVSA ++ +TS G N + Sbjct: 138 GDKELKVTTDM-----TYKDLINKINDGDYGVSAY-----TLGNKIFMTSKKEGATNEIK 187 Query: 193 LSVSGDDALQSFMGYDASASSN-GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLN 251 L + + L ++S + A +A+ T+N + + SNTI L + + Sbjct: 188 LEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIE-TLPGVKIE 246 Query: 252 LNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----YTAVDAGADS 304 L VT T T I +S + +++ K Y + D Sbjct: 247 LLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDI 306 Query: 305 QSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTA 364 + GA G + +++++ + ++++ + L GI DG +E++ + LT Sbjct: 307 FAGKGGAFQGQAIMQSVRQAMNNVVTFSQDG---NYLFSFGIQL-KQDGTMEVNDEALTK 362 Query: 365 ALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNA 424 ALK+ G+ + L G++ + ++ L K Sbjct: 363 ALKEKPDAAKQFFF---SSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKD 419 Query: 425 ASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + +++ +L+ + +L+S + + S+ Sbjct: 420 IETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 461 >UniRef50_O67805 Flagellar hook-associated protein 2 n=1 Tax=Aquifex aeolicus RepID=FLID_AQUAE Length = 441 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 90/471 (19%), Positives = 181/471 (38%), Gaps = 44/471 (9%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + GV D S+LD++ A + + + ++ KL G L+ + Sbjct: 1 MAGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKN 60 Query: 60 ANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + + + S + S + + NA ++++V + A + L + Sbjct: 61 LIENFNLESALKTKKADVSDSDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLD 120 Query: 119 TAIATSDSKLTI---QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 I SD T+ D TID S + +L I + IN + V ASI GN + Sbjct: 121 ETIG-SDGSFTLRYYTSPTDYVEYTIDYSLID-TLKDIVNKINETQDYVKASIYYDGN-K 177 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN-NVAI 234 Y+L + + + ++ + + +G N + + A+NA++ + I Sbjct: 178 YKLML-AETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNV-LIQQAKNARIQIGSGDVI 235 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 E++ NT + +E ++++ G ++I+QD SK + + ++V +YN ++ SLT Sbjct: 236 ESAGNTFENVIEGVSISAKRA--GTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLTL 293 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 N G++T+ ++ L L+ L ++G+ DG Sbjct: 294 ------------GENAPFRGENTIMNVKYGLSDTLT---------PLMELGLIEYKEDGT 332 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 + L + L + + + D K +T + S + + ++ Sbjct: 333 ISLSGN-LESVINEKP---------DEFKLKMTQFLESAKAVAKVNYEAFEDFKEYLNDQ 382 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 ++ ++ S R+ + K QF QL+ M N L Q + S Sbjct: 383 AERIDENIRLLSQRLVQEEQILKRQFAQLEDFMNYANQIRERLKQFMVSIS 433 >UniRef50_A9VNE8 Flagellar hook-associated 2 domain protein n=20 Tax=Bacillus cereus group RepID=A9VNE8_BACWK Length = 458 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 99/463 (21%), Positives = 176/463 (38%), Gaps = 36/463 (7%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D ++D A + +P + Q+ + T + Y ++K F L+ Sbjct: 22 IDTKKLVDLELQALEMKKSPYTTQKQTLTNENKVYASMKKEFANFVQVFKDLNTFKGDEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 +T S +A AI G YTI+V +A+ +TT L ++ Sbjct: 82 KTTLSKDGFMTAQADAAAIPGTYTITVERVAERHQITTAPLTPPKTPEGTEQKFSLDLKL 141 Query: 133 GGDK----DPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLD 188 G D + + IS + + + + INN GV S+ +G+ +L TS G + Sbjct: 142 GVDDVFQINGKEVKISE-DMTYKDLVNKINNGNYGV--SVYTLGD---QLFFTSTIAGKE 195 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGME----VSVAAQNAQLTVNNVAIENSSNTISDA 244 + L+ + LQ+ ++ +++G A NA+ T+N + + +N I D Sbjct: 196 GELKLTDGANGFLQNIGLVTSAKNTDGTNAIAHQVTGAVNAEYTINGIKGTSKTNKI-DT 254 Query: 245 LENITLNLNDVTTGNQTLTIT-QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 + +T+NL VTT LTI D + IK + YN+ + + D Sbjct: 255 IPGLTINLEKVTTEPIKLTIEDSDIKNSIDLIKKMKDEYNNAVKSL-------------D 301 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 S NG + G++ I + S+ S K L GI D G + LD +KL Sbjct: 302 LFSGENGVMQGNNVSFAISNAMTSIFR---FSQDDKYLFSFGIQID-KTGNMTLDEEKLK 357 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 A K++ G GI I L GII + + K + L + Sbjct: 358 IAFKENPESTKQFFFG---FNGIGHDIDKKLEGIFGDEGIIGKRSKSIEKQVTDLERKIQ 414 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + +++ +L+ + L+S + + S+ Sbjct: 415 DIDTINKKKQESIIDKYAKLESQLALLDSQLQTIKAMTKTKSD 457 >UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGD3_9PROT Length = 458 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 104/469 (22%), Positives = 201/469 (42%), Gaps = 33/469 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ISS+GVGS + +LD L AA + +TPI+ ++ K A + +++T + Sbjct: 2 GISSVGVGSSILTQDVLDQLRAADEGGQITPITLSLANEGDKKDALALIDASMTNLIDSI 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + L+ TT + ++ + T A N+ +T++VT LA Q + + + + Sbjct: 62 NEIKSQSLYDERKTTLTGSSVAVTAAANSDIQDFTLNVTTLATKQIEQSGSFGSE-DDLV 120 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSV 180 + ++ + G I A ++L +++ IN+ A V A+++ +G ++RL + Sbjct: 121 SGGAGQINLNIDGQDFAIDYT---ATTTLKELKNLINDVAGDKVDATVVQIGASDFRLFI 177 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S DTG +T++ ++ + NA T N AI +SN Sbjct: 178 SSADTGTTQNITITDVTGTIDSKL------STDFDAVAIQSGVNAAFTFNGQAISRTSNQ 231 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + D + + + L TG+ +++ QD + +V YN+ I +TK + Sbjct: 232 VDDLITGLKITLQA--TGSTDVSVQQDRENILSKFDSFVEKYNATITELDKMTKPS---- 285 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 + S G G+ST++ ++ ++ M +L G D S G + LD Sbjct: 286 ---TDSDERGIFSGESTIKNMKRAIEDM--IGSIGGGVGSLLDYGFDVDKS-GTMTLDKT 339 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTT---------IGSNLTSWLSTTGIIKAATDGV 411 L + +++S V G G TT + + + + D + Sbjct: 340 VLETKMDENSSNVEIFFAGGDFDNGDGTTTTVDGAFTEFSAKVEEYTKYNATLDQFKDSI 399 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 S+T++ L A++R+DA+ K+QF D++++ +NS SS Q Sbjct: 400 SETISSLEDRKAKATERLDAKYEILKKQFIAYDLMISRINSASSMFVQM 448 >UniRef50_Q73AL3 Flagellar hook-associated FliD, putative n=33 Tax=Bacillus cereus group RepID=Q73AL3_BACC1 Length = 469 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 92/471 (19%), Positives = 185/471 (39%), Gaps = 41/471 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S+ ++ A TP +N+++S + Y +LKS ++F L+ Sbjct: 22 IDTSNFVELEMNALDMRKTPYTNEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 TTS + G AIAG + +++T LAQ + + D + A +S T++ Sbjct: 82 KVTTSQDGYINVKADGGAIAGTFNMTITKLAQRHQIAS----DQIENIDAKINSDETLKL 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 GG + +T ++ + + + IN+ GVSA ++ +TS G D + Sbjct: 138 GGKELKVT-----SDMTYKDLINKINDGDYGVSAY-----TLGNKIFMTSKKEGEDGVIN 187 Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNL 252 + Q A+ + +AQNA+ T+N + ++S+NT+ AL + + L Sbjct: 188 FEGNKSSLFQKIGL--ANDDGVALHEINSAQNAEYTINGIKGDSSTNTVE-ALPGVKIEL 244 Query: 253 NDVTT------------GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----Y 295 VT G +T + T I+ +S + S++ K Y Sbjct: 245 LKVTEQTVEEKPVEKPDGEKTEVDPKTTEAKAKGIELKFTVSDSNVTDASNVIKKMVADY 304 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 + D + GA G + +++++ + S+++ + L GI DG + Sbjct: 305 NKAVSTVDIFAGKGGAFQGQTIMQSVRQAMNSVVTFSQDG---NYLFSFGIQL-KQDGTM 360 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 E++ + LT ALK+ G+ + L GI+ + + Sbjct: 361 EVNDEALTKALKEKPDAAKQFFF---SSNGLGKMMEEPLDKLFGDKGIVGERVKNIDSRV 417 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L K + + +++ +L+ + +L+S + + S+ Sbjct: 418 SDLDKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 468 >UniRef50_Q893U0 Flagellar cap protein fliD n=1 Tax=Clostridium tetani RepID=Q893U0_CLOTE Length = 556 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 98/551 (17%), Positives = 184/551 (33%), Gaps = 110/551 (19%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 SG+D I+ + A Q+A + ++ K Y + + Q ++K D Sbjct: 17 ASGIDTDDIIKKMLAGQQAKVDKAKQEKQQVEWKQEIYRDIIKDIKELQNTYFDITKKDS 76 Query: 70 FSATST-------TSSTTAFSATTAGNAIAGKYTISVTHLAQAQ----TLTTRTTRDDTK 118 ++ +S+ +A+ AI G Y + V LA+ L T T + Sbjct: 77 LNSGKAFYDFASKSSNEGIITASAGQGAIEGIYKVKVNKLAKGAQAYKQLGTDVTNSNKL 136 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA----GVSASIINVGNG 174 + TI G + +D +S++ + +I NA + +NV Sbjct: 137 KDLGIETKDFTITVDGKDFKVKLD-KGEDSTVGDLVSSIKNATTADGKEKLSKYVNVSFS 195 Query: 175 EY--RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 E R+ + + +TG + M+++ S G D SA E+ V + Sbjct: 196 EISKRMVIETKETGKEQIMSITG------GSIFGTDFSAKGEDAEIQVITPDGGTG---- 245 Query: 233 AIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS- 290 + N+ N L+ I+ NL ++ L IT+D K KD++ YN++++ + Sbjct: 246 TVNNAKNNF--ILDGISFNLKSISEKQEVNLEITKDVDKTVDRFKDFMKKYNNVVEKING 303 Query: 291 -----------SLTKYTAVDAGAD-----SQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 LT+ + D + + G L D L + +L+S V Sbjct: 304 KLTEKKAYKYKPLTEAQRKEMKEDEIKKWEEKAKEGILRNDPNLEKMLRELRSTFFAEVE 363 Query: 335 SSSYKTLAQIGITTD---PSDGKLEL---DADKLTAALKKDASGVGALIVGDGKKT---- 384 SS IG+ T + G++ +K AL + + L K Sbjct: 364 GSSESFGRHIGLDTTKYAKTAGQIRFVEGGEEKFKKALLERPEDIMELFTKKADKNDLDN 423 Query: 385 --------------------------------GITTTIGSNLTSWLSTTGIIKA------ 406 GI T I + L ++ G Sbjct: 424 LRKLQNLSKSKKITADQRKELIEVEKRVYNNSGIMTRIDNILKDYVGLPGNTLNSSILTK 483 Query: 407 --------------ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 +++ + + + ++ + R +QF ++ MT N+ Sbjct: 484 YANKQEDHSVTGVVSSNNLPDQIYRKDNLIKELDKKLREKEERLYKQFAMMEKAMTKYNA 543 Query: 453 TSSYLTQQFEN 463 + +L QQF Sbjct: 544 QAGWLAQQFGG 554 >UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 Tax=Burkholderia RepID=Q0BJF7_BURCM Length = 475 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 150/474 (31%), Positives = 236/474 (49%), Gaps = 37/474 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSF-TAKLSAYGTLKSALTTFQTAN 61 SI S S LD+SS++ +L A+ A T + + +LSA G LKSAL+ QTA Sbjct: 23 SIISGATNSTLDVSSLVSALVTAKTAGQTQTLTTKQTHDNTELSAVGKLKSALSALQTAI 82 Query: 62 TALSKADLFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ S + T+S T +A+ G A+AG Y ++VT LA A L++ Sbjct: 83 AGLANGSTLSGLAATASGTGITASVKNGGGAVAGSYAVNVTQLATANKLSSAGITASDTI 142 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 A + L G +++ AA +SLS I +IN GV+AS+I +G++ Sbjct: 143 AAGSLSITL-----GSNAAFNVNV-AAGASLSDIATSINTTAGNPGVTASVITGSDGQH- 195 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L + SN+TG N +++S +G +A ++G A +AQLTV+ + ++ Sbjct: 196 LVIQSNNTGAANTVSVSGTGVNAKL----------TSGYSTVTKAADAQLTVDGTPVSSA 245 Query: 238 SNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SN++S L +TLNL QT+T++QDT+ +AI +VNAYN + T SL+ Y Sbjct: 246 SNSVSGVLTGVTLNLTPAALNTTQTVTLSQDTTATTSAINAFVNAYNGYVTTAKSLSSY- 304 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT---LAQIGITTDPSDG 353 D +S+ G LLGD+ L TI + L + +S V + S T LA IGI DG Sbjct: 305 ------DPNTSTAGPLLGDAMLNTISSGLATAISGGVKTGSPSTTYSLAAIGINLQA-DG 357 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 L++D+ L AL ++ V AL G+ T+ + ++ G+I T ++ Sbjct: 358 TLQVDSTALNTALTSNSPTVAALF---NTTNGVGQTLNKLVNTYTQANGLIDQRTTALNA 414 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 L L+ + D A+Y QFT L+ LM ++ + + YLTQ F +++ Sbjct: 415 DLKNLSNQATQLKNYSDQLTAQYNAQFTALNNLMATMANNTKYLTQLFGGTNSA 468 >UniRef50_B7IQA2 Flagellar hook-associated protein n=10 Tax=Bacillus cereus group RepID=B7IQA2_BACC2 Length = 439 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 95/456 (20%), Positives = 174/456 (38%), Gaps = 41/456 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S +++ A TP +N++ T + Y +LK ++ LS Sbjct: 22 IDTSKLVELELQALDMKKTPYNNEKEQLTQEKLLYASLKKEFSSLTQTMKDLSSFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 T S S T +AIAG + I V LAQ +++ D A D + TI+ Sbjct: 82 KVTLSQEGYISVTADASAIAGTFNIEVKELAQRHQISSEKIADLD----AKIDMEETIKI 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 IT +++ + + IN+ GVSA + ++ +S+ G A+ Sbjct: 138 NNQDIVIT-----KDTTYRQLINKINSGNYGVSAY-----SLGNKIFFSSSKMGEKGAIK 187 Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNL 252 L SG MG+ + + + A+N+ +N V SNTI L + + L Sbjct: 188 LEDSGQ--FLEKMGFVKTDGT--LNEIEKAKNSTYVINGVEEHGESNTIE-TLPGVKIQL 242 Query: 253 NDVTTGNQTLTITQDTS--KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNG 310 + G +D++ +A IK V+ YN + T + NG Sbjct: 243 DKSEVGKSVKFTVEDSNVKEANELIKKMVSNYNQAVSTV-------------ELFGGKNG 289 Query: 311 ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDA 370 AL G + + I+ + ++++ + L GI +G L++D KLT ALK++ Sbjct: 290 ALQGQNIMGDIRRIMNNIVTYSQDG---NYLFSYGIQV-TKEGTLQVDEAKLTNALKENP 345 Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 G+ I + GII + + KL + N + Sbjct: 346 DAAKQFFF---SADGLGKQIDTQFNKIFGDVGIIGERIKIIDDRVGKLDRKINDIDIQNK 402 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + +++ +L+ + +L+S + + S+ Sbjct: 403 QKQDDIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 438 >UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT19_9FIRM Length = 603 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 103/412 (25%), Positives = 175/412 (42%), Gaps = 56/412 (13%) Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDI 143 AT +G AG VT A ++T AT + KLT G IT++ Sbjct: 215 ATVSGVTTAG-----VTSTASTGFVSTDVLSSKISGLPATFNLKLT--NGAKTANITLN- 266 Query: 144 SAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQS 203 ++ +L + D IN A G +AS N G G++ L TS TL ++G D+ Sbjct: 267 --SSDTLQQVIDKINAAGVGAAASFDN-GTGKFTLQATSG--------TLDLTGSDSAAL 315 Query: 204 FMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLT 263 + D + +V Q+A T++ V + +SNT + + +T NL V G ++ Sbjct: 316 QLFIDKLKLPANLP-TVHGQDAIFTLDGVNLTQASNTFT--ISGVTYNLKAV--GTASVA 370 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQS 306 ++ D KA +K +++AYNS++D ++ K + + Sbjct: 371 VSPDNDKAIANVKAFIDAYNSVLDKINAELKEERYPDYLPLTDEQRKEMSESQVTEWEKL 430 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD--PSDGKLELDADKL 362 + +G L D L+ +++ ++ V Y +L+ IGITT GKL LD KL Sbjct: 431 AKSGMLRRDPILQDTLFKMRYDIATPVQGVTGQYTSLSSIGITTGDYSEGGKLYLDETKL 490 Query: 363 TAALKKDASGVGALIVGDG---KKTGITTTIGSNLTSWLS--------TTGIIKAATDGV 411 AAL+ D V L +G ++ G+ + L L + + T + Sbjct: 491 KAALEADPDIVNKLFGSNGATREQDGVAVRLYDTLKGALDKIKGEAGTSAAVDGDTTSVL 550 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++ + K A R+ RY +QF L+V ++ +N + +L QQF + Sbjct: 551 AQRIKDYQKQMEAMDRRLKDIEDRYYKQFDALEVALSKMNQQTGWLLQQFSS 602 Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 112/282 (39%), Gaps = 21/282 (7%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--TANTALSKA 67 GSGLD+ ++ L A++A+ + +++ K + Y T+ S + +F+ T + Sbjct: 10 GSGLDVDQLVKDLMKARRASYDKLYQKKTQLEWKKADYATMYSTIKSFRETTVFNYKLQG 69 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL------TTRTTRDDTKTAI 121 L + + +AT +A +TI+VT LA TL TT ++D Sbjct: 70 TLAPKKVASGNEAVVTATANADAANVNHTITVTQLAGGVTLGSNGPITTGASKDTLAAQF 129 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + I+ TI + S+ AIN+A + A+ + R + Sbjct: 130 GLTGGSFDIKITNGTISKTITVDP-TKSIYDFVSAINSAGVNIKANYDATLD---RFFLY 185 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 + TG + + S + A+ +G+ A +T S++ + Sbjct: 186 TTGTGATVGIDFTGSSTAGIDFLQNKLKIATVSGVTT------AGVTSTASTGFVSTDVL 239 Query: 242 SDALENI--TLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 S + + T NL +T G +T IT ++S + D +NA Sbjct: 240 SSKISGLPATFNLK-LTNGAKTANITLNSSDTLQQVIDKINA 280 >UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEC9_VIBFU Length = 440 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 99/461 (21%), Positives = 205/461 (44%), Gaps = 39/461 (8%) Query: 13 LDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA--DL 69 +D +S+ + + T +++ F + S + S++++ + +K Sbjct: 3 IDAASMASQMAIYDVSPAETRYNSRLKIFQNQSSMLSKITSSMSSLDSVIYKFTKPGASF 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 T++ SS + TT+GNA + + V LA + + T+ + + + + Sbjct: 63 VQNTTSLSSEDHVNVTTSGNASSVNMDLYVEQLASSHQVVVNTSAMNVNDEFSPATGSIE 122 Query: 130 IQQGGDKDPITIDISAANS----SLSGIRDAINNAKAG-VSASIINVGNGEYRLSVTSND 184 +Q GG+ I + + +N S N G V+A+++ GN E ++ TSN+ Sbjct: 123 VQHGGETITIQLADAESNGDGTVSYQEFISHFNRVMDGRVTATMVRSGN-EMKMLFTSNE 181 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNT 240 TG DN +S S D L DA +++N + +A + + V + NSSNT Sbjct: 182 TGQDNQFQISASDDSGLS-----DAFSTANDNPIKT-GTDAIVWLGDYGSGVQLTNSSNT 235 Query: 241 ISDALENITLNLNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 + + + + L +T+ D T +K++V AYN ++ + TK + Sbjct: 236 FENIVNGVDVELKKAHEMGGIATNITVGPDADATMTLLKEFVTAYNDMMSVIAEATKSSG 295 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 +SS G DS+ ++++ QLK ++ ++ + +L+++G++ D S GKLEL Sbjct: 296 -------ESSERGVFSTDSSFKSLEQQLKGLMRDSYNGV---SLSEVGLSLDKS-GKLEL 344 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLN 416 D DK A + + + +G G+ TT+ ++ + G + + + Sbjct: 345 DEDKFREA--SKSVDMEQVFRAEG---GLFTTLQKSVNDYTDFADGSLTRKKETIELQQK 399 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 ++ + + D+ +RY Q+T+L+ +M S++S ++ Sbjct: 400 RINEALDKLEDKYQVIYSRYLAQYTRLNSIMASMDSINTLF 440 >UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED65_9LACO Length = 491 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 123/491 (25%), Positives = 207/491 (42%), Gaps = 58/491 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 ++S S +G +G+ S +D L + + T I N+ K A+ + + L+ + Sbjct: 16 ISSSSYMGQYTGI-TSDTIDQLLQSDELRKTVIQNKIDKINTKSQAWTDISTRLSNLTSK 74 Query: 61 NTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRT-TRDDTK 118 L + TSS + + +++ G Y + V LA A +T ++ D Sbjct: 75 LDVLQDEATYQTKKVTSSDDTIATISGTSDSMEGSYDLVVKQLATASKITGGVVSKADGT 134 Query: 119 TAIATSD-----SKLTIQQG---GDKDPITIDIS-AANSSLSGIRDAINNAK-------- 161 T I+T D KLTI G G +T++I A SL I +AINNAK Sbjct: 135 TKISTKDALGYSGKLTITNGATDGSDAALTVEIDVKATDSLKDIANAINNAKDPSDSTGT 194 Query: 162 --AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 AG+ A+I+N +L V+S + G D + G + + Sbjct: 195 KGAGLKATIVNN-----QLVVSSEEMG------------DRTLTIGGDLKDSLGFANSQT 237 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDW 278 QNA+ T++ + +E +SN+ +D ++ +TLN TL +T DT K +A+KD+ Sbjct: 238 TRGQNAKFTLDGIEMERNSNSPTDVVDGVTLNFKKADASKTITLGLTNDTDKELSAVKDF 297 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 V+ YNS++ S + + GAL GDSTL ++Q++L+S + S + Sbjct: 298 VSQYNSVMSFLSEKMDVGDPSKSDN----TTGALAGDSTLISLQSKLQSTVLGGKSVNGV 353 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI------------VGDGKKTGI 386 + +G++ D +G L LD K A L K+ + V G G Sbjct: 354 SA-STLGLSVD-RNGTLSLDEAKFKAQLAKNPNAVKDFFFKDTSTKYATEKTGTGYTADF 411 Query: 387 TTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVL 446 + ++ + G+I + K +++I + ARY FT LD Sbjct: 412 KAVLDRYTSTKSGSEGVISLRKSSYQSEIKDYNKQIERITEQIATKRARYVTMFTNLDTA 471 Query: 447 MTSLNSTSSYL 457 + +L S SY Sbjct: 472 IGNLQSQFSYF 482 >UniRef50_A0Q000 Flagellar cap protein fliD n=1 Tax=Clostridium novyi NT RepID=A0Q000_CLONN Length = 503 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 98/529 (18%), Positives = 192/529 (36%), Gaps = 93/529 (17%) Query: 1 MASIS-------SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSA 53 M+ IS G+ +G+D +++ + ++ + + + K Y + Sbjct: 1 MSDISGVGNFNRITGLATGMDTDTMVKKMLMREQQRIDRANGNKQYSQWKQEEYMEIIKD 60 Query: 54 LTTFQTAN--------TALSKADLFSATSTTSSTTAFS-ATTAGNAIAGKYTISVTHLAQ 104 + T L K++ +++T+ S + + A AG+Y I V +A+ Sbjct: 61 TRELRDDFLLISSPKETNLLKSEAYASTNAKSDNESIVEVKSLPGAKAGRYQIKVKDIAR 120 Query: 105 AQTLTTRTTRDD---TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK 161 A T+ + ++DD K I ++ L ++ N S S + I Sbjct: 121 AATIEFKGSKDDLAKVKEEIEKTNPDL--------------LNKVNVSFSELTGKI---- 162 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA--SSNGMEVS 219 S+I+ G+ + ++DT D + L + G +A G Sbjct: 163 -----SVISKETGK---KIANDDTMRDISNVLKGKYNSDYNEIDGNEAEVYIKEPGQSEY 214 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 + + N I+N IS N +N D G+ ++ + +D S + IK +V Sbjct: 215 TKVDSKYTSKNKFIIDNMQYDISGVTTNSVINTKD-DIGSISINVKKDVSSSVDKIKKFV 273 Query: 280 NAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 YN LI+ ++ + + + + G + DS ++ + Sbjct: 274 EKYNKLIEKLNTKVDEKKIYSYKPLTEEQKKEMKPEEIKEWEKKAKQGIIKNDSDIQQML 333 Query: 323 TQLKSMLSNTVSSSSYKT--------LAQIGITTDPSD---GKLELDADKLTAALKKDAS 371 ++++ S K+ L++IGITT GKL +D KLT AL++ + Sbjct: 334 SKMRQAFYGEYSKDFSKSDHKTFGISLSEIGITTSKETSKRGKLVIDESKLTKALEEKSD 393 Query: 372 GVGALIVGDG---KKTGITTTIGSNLTSWLSTTGIIKA--------------ATDGVSKT 414 V L G + GI + + + G + +SK Sbjct: 394 KVYELFTKSGNSKESNGILNRLTEIVDKYAGGHGGKDGILVKKAGYKDSRWLLNNDLSKK 453 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + K + + +Y + F++L+V M +NS SS+ Q Sbjct: 454 IIEQEKQIKQLERIMFTKQEQYYKMFSKLEVAMNKMNSQSSWFQAQMGG 502 >UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4V0A4_YERRO Length = 445 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 105/446 (23%), Positives = 205/446 (45%), Gaps = 48/446 (10%) Query: 29 TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD--LFSATSTTSSTTAFSATT 86 L + Q S F ++ + ++S L F+TA + ++K D + + TS + T Sbjct: 21 RLNRLKGQHSQFKSEQDSLNKIQSGLNDFRTALSGINKKDEGILKLKTNTSDEKIATVTA 80 Query: 87 AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA 146 A+ G Y + VT LA + L + D A++++ ++ G I ID ++ Sbjct: 81 NHKAVKGSYDLFVTQLASSHQLALKDLND---AAVSSATGAFELEIDGK--TINID-TSG 134 Query: 147 NSSLSGIRDAIN--------NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 SS++ + +AIN + K V+AS+I G GE L+++SN +G NA+T+ Sbjct: 135 LSSVAELAEAINKNKDNQGSDKKELVTASLIRTG-GEVVLTISSNKSGAANAITIPN--- 190 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNTISDALENITLNLND 254 G + AA +A++++ + I + SNT+ ++ +T+NL Sbjct: 191 -------GAATIFTGASEVELSAAADAKVSLGNENSGIEITHPSNTLDTVVDGVTINLVK 243 Query: 255 VTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGA 311 V T + + DTS Q +K +V+A+NS+ + + T D G D+ + + Sbjct: 244 VQKTGDTPLHIDVEMDTSATQEQVKKFVDAFNSVKKLVTPV--RTKADEGKDNTGKPSYS 301 Query: 312 LLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 + + + + L S++ +V+ K + GI T+ DG LE+D+ K A+K D Sbjct: 302 RNSNEGISALSSALNSLVRQSVNG---KRILDYGIKTN-RDGGLEIDSKKFEQAIKADPK 357 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 G+ L+ GD G+ + S + +++ + G+IK T+ + + + + + + Sbjct: 358 GLQDLLNGDA---GLLNKLDSAIEPYINKSNGLIKGRTESLERRTTSIRDQLDRLEKQYE 414 Query: 431 AQVARYKEQFTQL----DVLMTSLNS 452 ++ Y +FT + D + ++ S Sbjct: 415 QKIIFYTVKFTTIKNTADKMKANMKS 440 >UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6J4_9SPHN Length = 472 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 106/474 (22%), Positives = 205/474 (43%), Gaps = 34/474 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + LG+GSG+D++ + L AQ A ++ Q + ++S G+++S+L+ F A Sbjct: 10 TQLGIGSGVDMTGLASQLAEAQFAGRNERLTIQSETLERRISLAGSIRSSLSAFAAALGD 69 Query: 64 -LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L DL + T+++ A ++ G+ G Y++ VT LA Q L+ + + T A Sbjct: 70 RLRTGDLAPLPNITNASVAAVSSPLGSIGKGTYSLKVTKLASNQVLSGPIYSNPSDTVGA 129 Query: 123 TS-------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 + + + + P+TI+I AA ++L+ + AIN AG++A + NG Sbjct: 130 GTLTFRFGNTDTTSFTEDVTRSPLTIEI-AAGATLADVASAINGKNAGLNAYVAQTANGA 188 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L V D G+ N + D + + + + +A+ ++ ++ Sbjct: 189 -QLVVKGAD-GVKNGFIIEAVEDASNPGLANLAWQPGGDASRLIKTSADAEFLLDGISRV 246 Query: 236 NSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 + SN+I+ ++L+L G T++ + + ++D A N + + T Sbjct: 247 SPSNSITGIAPGLSLSLLGTNPGTPATISFNSPNAALSSVMQDITGALNEIASQLRTATD 306 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQIGITTDP 350 +G L D+ R + L ++ S + + S TL+++G+ Sbjct: 307 ------------PKSGDLARDTGARALSRSLSALGSAEIMPNAPTGSPSTLSELGLAIQ- 353 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG--SNLTSWLSTTGIIKAAT 408 DG D KLTAAL +D +GV A+ G+ +TI + S S G + + Sbjct: 354 RDGSFTFDNAKLTAALARDPAGVAAMFTT--GINGVYSTIDRMARSNSIASDPGSLAGSI 411 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 K+T+D +++ + A +F + D + + ST S+L Q + Sbjct: 412 ARYQSQSQKITEDLQELAEKQEILRANMVARFAKADSRVAASQSTLSFLQSQID 465 >UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 Tax=Burkholderia RepID=A4JAB2_BURVG Length = 530 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 152/502 (30%), Positives = 256/502 (50%), Gaps = 55/502 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS S +D++S++ +L A+ A ++ QQ++ +SAYGTL + L+ Q Sbjct: 36 ISGSTGNSSMDVNSLVTALVNAKTAGQAAALTAQQTTDNTTISAYGTLSAGLSALQAGLK 95 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 +LS +A + T+S +A A A+AG Y+I V+ +A AQ LT++ TA+A Sbjct: 96 SLSNGTTLNAFTATASGNGITAAAASGAVAGSYSIDVSQVATAQVLTSKGY--SATTALA 153 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + S L++ GG TI + +NS+++GI AIN+A GV+A+++N +G + L + Sbjct: 154 SGPSALSLSVGG--ASTTISLDGSNSTIAGIASAINSASNNPGVTATVVNGTDGAH-LVL 210 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN-------------------------- 214 + TG NA++++V+ +A S+ Sbjct: 211 HATATGSSNAISIAVTDSNAGDDLNKLAVQGSAGVALNGVSKATSSQLTANQSSLPQGTV 270 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT---------TGNQTLTIT 265 + AAQ+A T++ A+ +++NT++ AL +TLNL+ + QTLTI Sbjct: 271 NWTQTTAAQDAYFTIDGTAVTSATNTVTSALSGVTLNLSAASVDSAAGTTNASPQTLTIA 330 Query: 266 QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQL 325 QDT+ AI ++V+ YN+L+ T +LT ++ S S + G LLGDSTL IQ L Sbjct: 331 QDTTSQAAAINNFVSLYNTLVTTMGTLTSFS-------SSSKTQGPLLGDSTLNMIQNAL 383 Query: 326 KSMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 S+++N V S + +L IGI+ DG L +D+ L +AL+ + + V L Sbjct: 384 ASVVANGVKSGGTTSSLGAIGISLQA-DGTLSVDSTTLNSALESNQATVAKLF---NSTN 439 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 GI + S++ +L T G I+ T+ +++ L ++ A S Y+ QFT L+ Sbjct: 440 GIAAQLNSDIAGYLGTNGPIQTRTNTLNRDLTSISTQQAALSTYQAQLTNMYQAQFTALN 499 Query: 445 VLMTSLNSTSSYLTQQFENNSN 466 LM+++N+ S YLTQ F ++ Sbjct: 500 TLMSTMNNNSQYLTQLFGGTNS 521 >UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM4_DESAD Length = 580 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 169/432 (39%), Gaps = 43/432 (9%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 +G+G D I+ + Q + N ++ + K + L + +T TA ++ Sbjct: 30 LGNGTDFGEIVKNTLKQQGFHQRRLENWRAQWVKKQESLKGLNTKMTELSTALNKMNSIG 89 Query: 69 LFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 F T+SS ++ +AT A Y + + LA+ T+ + K I+ S SK Sbjct: 90 KFMGRVTSSSDSSCVTATADSTAPTSPYKVEIKQLARNDIWTSNSGYASEKDVISPSGSK 149 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 ++I GG I + L + +A K V I GN EYRL +S G Sbjct: 150 ISISCGGKTANIDVPGGTTVEGLVKMLNATTELKDLVQVEAIKTGN-EYRLKFSSLKMGE 208 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV------AIENSSNTI 241 N +T + S + + M QN+++ ++ IE +NT+ Sbjct: 209 ANRITFNAS---------TTLPALAPASMTNLQQGQNSKIKIDGFPEGTDNWIERDTNTV 259 Query: 242 SDALENITLNLNDVTTGNQTL-TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 +D + +TLNL T+ + + + DT K ++++V N + ++K A Sbjct: 260 TDGSKGLTLNLKKATSPDSVIVNVNTDTEKIIENVREFVKQVNIVRQALRDISKVDATK- 318 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSML-----------SNTVSSSSYKTLAQIGITTD 349 L G+ ++ + K + S T + Y TL +GI T+ Sbjct: 319 ----DKEKGSILTGNYGVQLASHRFKDITATKGQGFNNFDSATGAGDRYNTLRTLGIETE 374 Query: 350 PSD-----GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 G L++D +K A+K + GV L D + +T N T G+ Sbjct: 375 TDQSSPNFGLLKIDEEKFEKAMKDNPDGVAKLFSADYE----ASTSSPNFTIKSLIKGVT 430 Query: 405 KAATDGVSKTLN 416 K T VS T++ Sbjct: 431 KPGTHDVSYTVS 442 >UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMQ7_9BACT Length = 542 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 195/425 (45%), Gaps = 25/425 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SSL VGSGL+ I+D+L A++A + I+ + T ++S+ G +K TF + T Sbjct: 6 LSSLNVGSGLNTKEIIDALVEAERAPKASEITTAKEKRTVEISSLGQVKQGFETFDNSLT 65 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT--- 119 + + SA S++ ++ A + A A +I +T +A QTL +T + Sbjct: 66 PVKEITGLSA-SSSGTSMAVEISDAKVASNFSNSIEITAVASGQTLVFGGYSSETASTGT 124 Query: 120 -----AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 + T +S + + + + ++ +L+ +RDA+N A V+ASI+ G+ Sbjct: 125 GTLTFSFGTWNSDNSFTANSSRSDVAVQLATGAGTLADLRDAVNAANMDVTASILKTGSS 184 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 Y L + + + G +AM ++ S D + A + N +VAA +A T++ VA+ Sbjct: 185 TYALVLKARE-GAAHAMRVTASEDTGAAGLANF-AYTTPNNSVQTVAAADAAFTMDGVAV 242 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +N ++D ++ + L + T+ +T++ + DT+ AQ A++ V+ NS+ T L+K Sbjct: 243 TRETNEVTDLIKGVKLTVKSTTSAAETISGSYDTTLAQAAMQIMVDQINSIGTTLRDLSK 302 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK--TLAQIGITTDPSD 352 A + L GD+ + ++ QL+ + ++ L G+TT+ D Sbjct: 303 RGAAG-------EEDAPLAGDAYVMMLRRQLRGYTTTPITGFGDNDIYLTDFGVTTN-RD 354 Query: 353 GKLELDADKLTAALKKDASGVGALIVG---DGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 G L LD K + D AL G + + G+ + T I +T Sbjct: 355 GTLSLDTAKFQKTYEADPDAFAALTTSRITSGSELVSASVAGTYPKEGVYTFDIASDSTA 414 Query: 410 GVSKT 414 ++ T Sbjct: 415 TLNGT 419 Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 71/413 (17%), Positives = 139/413 (33%), Gaps = 39/413 (9%) Query: 52 SALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 L + A A + S T SST A A A T + Sbjct: 158 GTLADLRDAVNAANMDVTASILKTGSSTYALVLKAREGAAH----------AMRVTASED 207 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 T T+ + T+D A + + D I GV ++ + Sbjct: 208 TGAAGLANFAYTTPNNSVQTVAAADAAFTMDGVAVTRETNEVTDLIK----GVKLTVKST 263 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 + +S + + T AM + V +++ + + + + G E + A +A + + Sbjct: 264 TSAAETISGSYDTTLAQAAMQIMVDQINSIGTTLRDLSKRGAAGEEDAPLAGDAYVMMLR 323 Query: 232 VAIENSSNT-ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + + T I+ +N + T N+ T++ DT+K Q + +A+ + + T Sbjct: 324 RQLRGYTTTPITGFGDNDIYLTDFGVTTNRDGTLSLDTAKFQKTYEADPDAF-AALTTSR 382 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP 350 + V A G D ++S S TL +T Sbjct: 383 ITSGSELVSASVAGTYPKEGVYTFD-----------------IASDSTATLNGTAMTVSG 425 Query: 351 SDGKLE-LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 SD + DA L ++ + + + ++ L+++G ++ Sbjct: 426 SDYTIANHDAGGLKLSITSGGTDTKIYVGKS-----LFESLDDFSRDVLASSGDLQQKIT 480 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++ L+ +D A + I AR++ QF ++ + SL T L E Sbjct: 481 SYNEDLSDYDEDIAALDESIARLRARHEAQFAAMNAAVASLKETEKALDNMME 533 >UniRef50_C4XHC1 Flagellar hook-associated protein 2 n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHC1_DESMR Length = 563 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 96/392 (24%), Positives = 170/392 (43%), Gaps = 27/392 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+ G+G+G D S++ L +++ +T + + S+T K +A+ L + + T +T+ Sbjct: 15 GQITYSGLGNGTDFDSMIKKLVQVEQSRITSLQTWKKSWTDKQAAFQELNTQMLTLKTSL 74 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + D F + +S +T SA A G + + V LA A+ + T T T Sbjct: 75 EDMDSMDEFMTKAVDSSDSTVVSAVAGAGAENGSHEVVVNRLATAKAMVTATGYASASTD 134 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRL 178 I +S S + + A N +L+ + INN + GV AS+ G+ +Y L Sbjct: 135 INSSSSDAMFAYTYKGVTYSNTVGA-NCTLTDLASIINNDPSNPGVKASVSYDGS-KYYL 192 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + DTG ++ + + + L F D S ++ + + T + I + Sbjct: 193 QLRGMDTGSTASLVI--ASNSTLSGFGNSDFSTITSNASAQLKL-DGWPTASGSWITRET 249 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N+++D + +T+ L +TG+ T+ T DT + I+ +V N + +++ Sbjct: 250 NSVTDLIPGLTMTLK--STGSATVVTTTDTDAIKEKIETFVEQVNLVRTKIQEISR---- 303 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-----SSYKTLAQIGITTDPSDG 353 DS + L G+ ++ I T LKS ++ Y TL+Q+GI TD G Sbjct: 304 ---VDSTTQQASLLTGNYGIQLIDTNLKSAVAGLGVGFDYDQDKYSTLSQLGILTDAEQG 360 Query: 354 K-----LELDADKLTAALKKDASGVGALIVGD 380 L +D D L A L +A VG L Sbjct: 361 STTEGLLVIDDDVLDAVLASNADAVGQLFAAQ 392 >UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF2_BACSK Length = 579 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 109/448 (24%), Positives = 179/448 (39%), Gaps = 66/448 (14%) Query: 50 LKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT 109 + + L+K ++F + T ++ + + GK T+ Sbjct: 165 VNGKAYAVADSPDDLAKGEVFI------NDTGEVTFSSADKVTGKVTVEYIQ-------- 210 Query: 110 TRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 D T S S TI G+K + ++ ++S + + NA A V+A Sbjct: 211 ----ADSEATERYLSSSVATIAANGEKVESSFFFKESD-TISSVVTKLQNAGAKVNAFF- 264 Query: 170 NVGNGEYRLSVTSNDTG---LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 L VT +TG L SG Q D A +NAQ Sbjct: 265 --DENSGSLVVTRKETGHFGEAGQNELMFSGALFEQGLGLNDN---------VEAGKNAQ 313 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 TVN + E +SNT + L +T+ L D +T TL+ D IK +V YN+L+ Sbjct: 314 FTVNGIETERTSNTFT--LSGMTITLKDTSTQAVTLSAATDVDSIVETIKSFVEEYNALL 371 Query: 287 DTFS-----------------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 D + + T +A + + +G L D L+T T ++ L Sbjct: 372 DHMNGKLNEKYYRDYDPLTDEERDQLTESEAKRWEEKAQSGLLRRDPLLQTALTNMRQTL 431 Query: 330 SNTV-SSSSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVG-DGKKT 384 V + ++ L+QIGI+T + GKLE+D +KL AA+++DA V + G D + Sbjct: 432 YEPVDTGGAFTHLSQIGISTTKNYKDGGKLEIDENKLRAAIEEDADSVYTIFAGTDNNGS 491 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDG--------VSKTLNKLTKDYNAASDRIDAQVARY 436 GI T+ +NL+ +S+ + ++G + K +LT R++ + ARY Sbjct: 492 GIGQTLRANLSDSMSSLSMRAGGSEGYYEEHQFTLGKQTKELTDRIANFERRLEQKEARY 551 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFENN 464 QFT ++ M N+ S L N Sbjct: 552 WRQFTAMEKAMQLANAQSESLYNLLYGN 579 >UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN7_CHRVO Length = 458 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 128/474 (27%), Positives = 222/474 (46%), Gaps = 28/474 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+SIS+ LD+ SI+ L A L + S++ ++LS G + SAL+ Q+A Sbjct: 1 MSSISAS--AGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSA 58 Query: 61 NTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTT-----RTTR 114 + L S TSS T S +T+ AG Y ++V+ LA+++ L + Sbjct: 59 ASTLQSGSFLQQFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAI 118 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 D AI+ + S L+ GG + + +N+SLS I ++IN A GV+ASI+ N Sbjct: 119 TDQNAAISGAPSSLSFSVGGASSTVQL---GSNASLSSIANSINGAGIGVNASIVQY-NN 174 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS--ASSNGMEVSVAAQNAQLTVNNV 232 Y L ++S G NA +++ G D+ + A S+ S AQ+A +TVN V Sbjct: 175 TYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGV 234 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + + SN+++ + T+NL TG T+ + Q T+ ++ ++NAYN +I T +S Sbjct: 235 NVSSDSNSVTSVVNGATINLEK--TGQVTINMAQSTTNITNTLQTFINAYNQVITTTASA 292 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLAQIGITT 348 T+ + + +G L ++Q + S+L V SSY LAQ+GI T Sbjct: 293 TQSHTTVGSTPTNTDISGDLT------SLQEHMASILGTPVKGVDATSSYAYLAQVGI-T 345 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 +DG L LD+ AAL + S V L G+ + TG+ + + S L G+I + Sbjct: 346 QKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINSLLGPNGLITSNQ 404 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++ + + ++++ + +++ L+ + + SS + Sbjct: 405 TNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA 458 >UniRef50_B8DS30 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS30_DESVM Length = 579 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 114/457 (24%), Positives = 192/457 (42%), Gaps = 59/457 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+ +G D I+++ A ++ + + Q+S+ AKL+A L++ +TT Sbjct: 7 GSITFTGLNTGTDWDEIIEAQMAVEEYRYNAMLSAQTSYEAKLAAVQDLETQMTTLYQTL 66 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 S F A + TSS T + T +A +T+ V LA+ ++ T T Sbjct: 67 QDYSSVSDFLAKAATSSDETCVTVTADNDAKESSHTVVVNQLARNDIWSSDDGYAATGTV 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA---KAGVSASIINVGNGEYR 177 I +D + G + + ++LS IN A V ASIIN GN Y Sbjct: 127 ITDTDQTFSFTYGDMTYTLDV---PGGTTLSEFASLINGASGNNDDVRASIINEGN-AYH 182 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L + D G DN +T+ +G DA+ + + AQNAQ+ V+ Sbjct: 183 LQIRGMDLGADNTVTIEDTGFDAMG----------PDAFTNTQKAQNAQIKVDGFPAAAD 232 Query: 233 -AIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 +E S+NTI D ++ +TL L T + + + D A++ V + N+++ Sbjct: 233 EWMERSANTIDDVIDGVTLQLKKATGSDGVNINVALDADAMVGAVETVVGSINTVLQLLM 292 Query: 291 SLTK--------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 L + + A+ S+S L + ++ +Q+ LKS+LS Sbjct: 293 DLRSQGTVSSSVSTSTASDSDDEDDAEDDSASASVLASNYGVKLVQSTLKSILSTKGLGF 352 Query: 337 SY-----------KTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD 380 SY +L+ IGI+TD + G L +D D L AA+KKD + V L+ D Sbjct: 353 SYYDSASETGDLFTSLSTIGISTDADEDSETFGLLVIDYDDLEAAIKKDPNAVAELLSAD 412 Query: 381 GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 + T + + + +G +A VS + Sbjct: 413 VAGS----TDSGDFSFGSAISGTTRAGQYDVSYRIEN 445 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 7/215 (3%) Query: 257 TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQ-SSSNGALLGD 315 T T+ I+ D + V Y+ L A AD S+ +G Sbjct: 366 TSLSTIGISTDADEDSETFGLLVIDYDDLEAAIKKDPNAVAELLSADVAGSTDSGDFSFG 425 Query: 316 STLRTIQTQLKSMLSNTVSSSS----YKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 S + + +S + + Y I+ G D L AL + + Sbjct: 426 SAISGTTRAGQYDVSYRIENGEIVEAYINGNAASISGWTITGASGKDEKGL--ALTVNNT 483 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 G+ K G L S+ G ++ D L++ + + +R+ Sbjct: 484 SDGSYTGSVSLKQGKIGQFIDTLEDMTSSKGTLQIMEDSFQDILDQYAQSISREEERLGL 543 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 +R + +++ L+ L+TS ++ SS + + S+ Sbjct: 544 VESRLRSRYSGLETLLTSYDNLSSTIDSLLASLSS 578 >UniRef50_C6QNN0 Flagellar hook-associated 2 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN0_9BACI Length = 418 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 161/420 (38%), Gaps = 66/420 (15%) Query: 98 SVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAI 157 V + + A L+ + +TK I + +Q G I S + +++ + + Sbjct: 9 EVGNASSATKLSEKGLAAETKITI------VALQANGTYKEEEITFSP-DDTIADVVKKL 61 Query: 158 NNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTL--------SVSGDDALQSFMGYDA 209 N + ++A I + + ++ +++ TG + + + S +GDD + G+ Sbjct: 62 NQSSLNINA-IFDDSSK--KMGISTRATGTLDTIDVDKAEVYVKSATGDDIFATIFGFGT 118 Query: 210 SASSNG----MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTIT 265 NG ++ QNA+ T+N + +E SNT + + I + VT+ T+T + Sbjct: 119 GNDQNGNSGVTSLANGGQNAKFTLNGLEMERQSNTFT--INGIEYTVKAVTSTPVTVTSS 176 Query: 266 QDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQSSS 308 D I+++VN YN LI T + + T + + Sbjct: 177 TDVDGMIAKIEEFVNKYNELIGTLNDKIREKRYRDYPPLTDEQKKEMTEKQIELWEEKAK 236 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSSSSYK---TLAQIGITTDPS---DGKLELDADKL 362 +G L GDS + +Q++ L + V TL++ GITT GKL +D DKL Sbjct: 237 SGLLRGDSIISNGLSQMRRDLYSRVDGIGENVIDTLSEFGITTTSEISSGGKLVIDYDKL 296 Query: 363 TAALKKDASGVGALIVGDGKKTG-----------------ITTTIGSNLTSWLSTTG--I 403 AL+ D V + +G T + TI +T+ G Sbjct: 297 RKALESDPDKVVKTLTQNGAITKDSATGQVTSDTRGIVQRLRDTIKGIITNIEKKAGKPT 356 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + L + + R+ +RY QFT ++ + N S +L QF Sbjct: 357 YTENQYSIGLQLRDVENQISDFQRRLQDIESRYWRQFTAMEQAIQRANQQSMFLMGQFGG 416 >UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=B9D404_WOLRE Length = 577 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 184/410 (44%), Gaps = 34/410 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + +SSLG GS + +++ L AA + + P++N+ ++ K LK+ + TF++ Sbjct: 3 LGKVSSLGFGSQVLTQDVINKLKAADEAGQIKPVTNKIAANATKQKDLTALKTLIGTFRS 62 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +AL+ + +T+S + + + I V LA+ + T + Sbjct: 63 SVSALADDSSYQKRTTSSDGKSADISVSPGVAVQNIDIDVKQLAKKDVYQSTKF--GTSS 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINV-GNGEYR 177 + + I+ G I + ++++L + D IN G VSA + V G Y+ Sbjct: 121 SFIGKNGTFGIKVGNQTYKIEVK---SSTTLEELADKINEVTNGAVSARAMKVGGEDPYQ 177 Query: 178 LSVTSNDTGLDNAMTLSV--------SGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 L + S +TG DN + ++ +G D + +G+D++ +N AQ+A+ Sbjct: 178 LILQSKETGADNKIEITNVDNDGNALNGADDVLQKLGWDSANIANN--KISTAQDAEFVY 235 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N + I+ S N I D +T+ L D TG T ++ +DTS + ++K V AYN+L++ Sbjct: 236 NGITIKRSGNEIKDLNLGMTIKLKD--TGKTTFSVKEDTSAIKESMKSMVTAYNNLVNNL 293 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-----TLAQI 344 T Y DS + +G G + TI++ L +L + + LA Sbjct: 294 KVATDY-------DSDTKKSGTFQGVGEINTIKSTLNKILFGNQTYTKDNVTKTANLADY 346 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 G++ + +G LELD+ KL L +D V + G G G + S Sbjct: 347 GLSLN-KEGLLELDSSKLGKKLDEDLQSVQKIFAG-GTTYGTAQVLSSKP 394 Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 2/125 (1%) Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGI 403 GI ++G ++ AAL + + GI + + +++ G Sbjct: 454 GIMLKTTNGT-AINIKGSAAALNAVGFSESTVTPKNTTVNGIFASTKKAVDGLINSKNGS 512 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + +++ L K+ +DA+ A +E+F D +++ LNS S L E Sbjct: 513 LTKYAQSLTEEKKTLDKEKEKTQKTLDAKYATMEERFLAYDKIISKLNSEFSSLKSMIEA 572 Query: 464 NSNSK 468 N K Sbjct: 573 EYNKK 577 >UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJR8_ACTMD Length = 430 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 116/461 (25%), Positives = 206/461 (44%), Gaps = 38/461 (8%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ +GLD +SI+ L + A T + +Q S+ +AY L + + + A AL+ Sbjct: 6 GLVTGLDTTSIISQLMQIEAAPKTRLQSQVSAQQRVQTAYQALNARMLAVKGAAEALNGD 65 Query: 68 DLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 + A +SS+ A AT GN A+AG T S+T LA+A T + ++ AT S Sbjct: 66 STWQALKASSSSDAAVATATGNSAVAGSITFSITSLAKAHVATAQVP----ESGGATKGS 121 Query: 127 KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTG 186 L + GG T + + + +G+ +A+N A GV A++I G+ R+ +S TG Sbjct: 122 GLEVTVGGK----TTHVDVTDDTAAGVAEAVNKAGLGVRATVITTTTGQ-RVQFSSAKTG 176 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALE 246 + A T+ + M D + S G + ++ + T + ++ N + L Sbjct: 177 AEQAFTV---------AGMANDPTVLSQGSDATITVGDPATT--GYKLTSADNNFTSVLP 225 Query: 247 NITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQS 306 +T+ V + T+T T D+S + VNA N+ I T Y D+ S Sbjct: 226 GVTVRATKVQN-DVTVTSTVDSSGIGDKVAALVNAVNAAISTAKGYDTY-------DAAS 277 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 + G L GD+ R +++ L + +S +S+ T++ G+ ++G+L D K AA Sbjct: 278 KTAGPLNGDTLARGLRSSLLTTVSG--GGTSFGTMSAFGVAL-GTNGQLTFDKAKFVAAF 334 Query: 367 KKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAA 425 + D V + G+ STTG + A G TL +L + Sbjct: 335 EADPEKVRTAVT-----DGLVKPYKKIGEDASNSTTGSLTVAVQGGDTTLRRLNTAISEW 389 Query: 426 SDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ++ ++ ++ ++ L+ M+ LN +S+L+ Q S+ Sbjct: 390 DTKLASKKVSLQKYYSTLETSMSKLNQQASWLSGQLAGLSS 430 >UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKQ6_9BURK Length = 523 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 161/498 (32%), Positives = 251/498 (50%), Gaps = 50/498 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I S S +D SS++ +L ++ A I+ +Q++ +SAYGTL + L+ Q A Sbjct: 34 IISGSTNSSMDTSSLVTALVNSKTAGQAATIAAEQTADNTLISAYGTLSAGLSALQAAIL 93 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 LS + +T S T +AT A+AG Y+++V +A +Q LT+ T A Sbjct: 94 PLSDGQTLNTFKSTLSGTGVTATATTGAVAGSYSLNVAQVATSQVLTSAGYNASTNLASG 153 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + LT+ + TI ++++NS+++GI AIN+A GV+A+++ +G + L + Sbjct: 154 AATMTLTV----NGKSSTISLNSSNSTIAGIASAINSANDNPGVTATVVTGADGAH-LVL 208 Query: 181 TSNDTGLDNAMTLS-----------------------------VSGDDALQSFMGYDASA 211 SN TG +++S + D + ++ ++ Sbjct: 209 QSNSTGASGGISISVSDSTSSDDLNKLAVATTAGKSISSASDLTATDSSGNTYNPSQSTI 268 Query: 212 SSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSK 270 S +G + AAQ++ T+ V + +S+N + AL +TLNL G TLTI QDTS Sbjct: 269 SGSGWTQTQAAQDSYFTLGGVGVSSSTNAVKTALSGVTLNLTSAAVGTTQTLTIAQDTSA 328 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 QTAI ++V YN+L+ T SLT Y + S+S G LLGDSTL IQ QL ++ Sbjct: 329 EQTAIDNFVTVYNTLVTTMGSLTSY-------NKNSTSQGVLLGDSTLSVIQNQLAKIVG 381 Query: 331 NTVSSSSYK-TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 + V S S K TLA IGIT DG L +D KL AL+ + S V ++ TGI Sbjct: 382 SGVGSGSTKTTLAAIGITLQS-DGTLSVDDTKLGDALQNNQSAVASVF---NPTTGIAAQ 437 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + ++T++ S TGIIK TD ++ L L + ++Y QFT LD LM + Sbjct: 438 LDDSITNYTSPTGIIKNRTDAINSDLASLANQQTTLTAWQAQLTSQYTAQFTALDKLMAT 497 Query: 450 LNSTSSYLTQQFENNSNS 467 +N+ S YLTQ F +++ Sbjct: 498 MNNNSQYLTQLFGGTNSA 515 >UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P7_NITSB Length = 452 Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 120/461 (26%), Positives = 210/461 (45%), Gaps = 37/461 (8%) Query: 2 ASISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 +S G+ +G D ++ LD L + L + QQ AK +A +KSAL+ F + Sbjct: 3 GEMSITGLTNTGFDYNAYLDKLAQLKSIPLQQMQAQQQKIIAKSTAIVQVKSALSDFLSP 62 Query: 61 NTALSKADLFSAT-STTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 T L + ++ +T S+ S + G A G Y + V LA+A + ++ T Sbjct: 63 LTTLQDSSIYDKLDATLSNDNIASVSVDGTKAQPGSYNLEVVQLAKASSFLISPAQNVTD 122 Query: 119 TAIATSD-SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG--- 174 A +D LTI D ++DI SL+ I + IN + A + A++IN G+ Sbjct: 123 PNAAFTDSGTLTINYKLDGTATSLDIDYTGKSLADIVNEINQS-ADLEATMINSGSSTSP 181 Query: 175 EYRLSVTSNDTGLDNAMT--LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +YR+ VTS TG+DN +T GD+ D S + AAQNAQ+ +N + Sbjct: 182 DYRILVTSKKTGIDNEITGISDSDGDNTTGFDTNSDPSTDPRASYTTQAAQNAQIKLNGI 241 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 IEN++NT SD L + + +V G +LT+ +D S + ++ V+AYN+L DT + + Sbjct: 242 IIENATNTFSDVLSGVEITAQEV--GTSSLTVAKDFSDIENSLDTIVSAYNTLKDTINQV 299 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 T + L G+ +L I T + + L++ + Y L G + + Sbjct: 300 T-------------AKGQPLQGEGSLSRITTTIFNKLNSVL--GQYGLLDTTG-EGEAAT 343 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 GKL L D L +L D + T + + S + ++ +I Sbjct: 344 GKLVLKKDAL-ESLFNDPN-----FDAKTTFTNMARDLESYVNNYTDNMTLINER---YL 394 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + +++ K+ S+RI ++ + ++ +++V ++ L T Sbjct: 395 EQSDRIQKEIEEKSERIQKEIDALRTRYAKINVYLSQLQDT 435 >UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA02_9FIRM Length = 733 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 93/428 (21%), Positives = 176/428 (41%), Gaps = 63/428 (14%) Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGG-------------- 134 + G ++ V+ + + + + T + + +S I GG Sbjct: 312 DPATGAFSFDVSAMKGSSIMLSGTNATEDLLGVLNGESN-RIGLGGSVKMYFGNAFVDGK 370 Query: 135 ---DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAM 191 + + TI I+ + ++ + +N + AGV+ + + R ++T+N TG + Sbjct: 371 AQLEINGKTITITE-DMTVGDMIRKVNASGAGVTMTYQAEAD---RFTLTANSTGAAFDI 426 Query: 192 TLSVSG-DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITL 250 L + +A+ D S G A +NA+ TV+ V IE SSNT + + Sbjct: 427 KLGNTALSEAIFGKAPADPSKPDAGGYTFTAGKNAKATVDGVEIERSSNTFE--FNGLNI 484 Query: 251 NLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL----TKYTAVDAGAD--- 303 L T +T+T++++T + +K ++ YN+LID +SL T Y D Sbjct: 485 TLTGTTDKTETITVSRNTDQIVDGVKSFIEDYNALIDKLNSLIEEDTDYREYAPLTDAQK 544 Query: 304 -----------SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP-- 350 + + G L DST+ T Q++S + + S + + +GI T Sbjct: 545 KEMSEKEIELWEEKAKKGLLRNDSTISTFLQQMRSAIYQRPAGSPF-AIYDLGIETGEWE 603 Query: 351 SDGKLELD---ADKLTAALKKDASGVGALIVGDGKKTGITTTI-----------GSNLTS 396 + GKL +D L AA++ + GV AL G+ I G++ S Sbjct: 604 TKGKLVMDADGEATLRAAIESNPDGVVALFTGEQGLASQLDKILTNTASTSFVSGNSRGS 663 Query: 397 WLSTTGIIKAATD---GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + G + A+D + T+ ++ + + + RY +F ++ ++ ++S Sbjct: 664 LVEIAGYAETASDKDNTLYNTIQQIDQKIKDLKAAYEQEKTRYWNKFNAMESMIQQMSSQ 723 Query: 454 SSYLTQQF 461 SS+L QQF Sbjct: 724 SSWLAQQF 731 Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 37/274 (13%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA------NTALSK 66 +D S++++L + +A + + + K Y + + + TFQ +T Sbjct: 1 MDTESMVEALLSGTQAKIDKQNALRQQTVWKQEIYREIITQMNTFQNKYFGSSSSTNFLS 60 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR---------DDT 117 + F+A + SS++AF + + A G +I+V+ LA+A L++ + D Sbjct: 61 STFFNAMNAVSSSSAFKVSASSGATVGSTSIAVSQLAEAAKLSSASGTRKLSGEINLDAI 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITI---------DISAANSSLSGIRDAINNAKA-----G 163 + +A +T + ++ I D + A A Sbjct: 121 QKQVAGQARDVTFVVNNKTVKVDFKDLFVNDDGTFKTPPATQQQIADRLTEAFAAQGFDK 180 Query: 164 VSASIINVGNGEYRLSVTS----NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 + A + N G + +TS +D G+ +++T+S S A +G +A+AS+ + Sbjct: 181 IKAEVGNDGE----IVITSSTWDDDNGVGDSITVSSSSSAAGLKILGLNANASAEVYTGA 236 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLN 253 + +L + + ++ LN Sbjct: 237 DGKKGMKLESSQPIATGNYFSVDVTFNGSKTTLN 270 >UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WT49_ALIAD Length = 514 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 228/495 (46%), Gaps = 51/495 (10%) Query: 10 GSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+GL ++ + L + L P+ +Q S+ T++ SA +L+SAL TFQ A L+ Sbjct: 31 GNGLPVTQYVQDLQTILQQELEKPLQSQISTLTSQQSALSSLQSALQTFQQATETLASLQ 90 Query: 69 LFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT---KTAIATS 124 +S ++TS+++ S T + A G Y+I VT LAQAQT + T + +A+ Sbjct: 91 SWSTVQASTSNSSVLSVTASAGASVGTYSIQVTSLAQAQTTFQTSGLQSTANGASTLASG 150 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTS 182 +T P++I+I A SL I +AIN + GV+AS+I+ G Y L+++S Sbjct: 151 TLVITPNTLNKAQPVSINI-AQGESLQDIANAINEKTTQTGVAASVISNGQNSYFLALSS 209 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 TG T++ + + + + + + AQNA + V + +S+NT Sbjct: 210 IQTGQAYGFTVTETNVGSNGAQIAF---------QTDTQAQNATIVVGGQTLSSSTNTFQ 260 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 + + N+T+ LN++ G +T++ DTS A+ A++ W+NAYN+LIDT T YT Sbjct: 261 NYIPNVTIQLNNI--GTANVTLSNDTSGAEKAVQTWMNAYNTLIDTIRQDTAYTPASGA- 317 Query: 303 DSQSSSNGALLGDSTLRTIQTQL--KSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA- 359 SSS G L GD + + Q+ + +S Y +LA IGI DP+ G LE + Sbjct: 318 -KTSSSAGPLFGDPLTQGLLQQIPAAVSSVASSVASQYNSLASIGIVLDPTTGHLEFQSA 376 Query: 360 --------------DKLTAALKKDASGVGALIVGDGK-------KTGITTTIGSNLTSWL 398 AL + S V L +G+ + + L + L Sbjct: 377 SGFSSAAGTLPDGQTMFQQALASNLSAVEQLFGVVDTTAPQAIPTSGVLGNLYNLLNTML 436 Query: 399 ------STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 + I++ + L N +I +V +Y+ Q +L+ +M + Sbjct: 437 IGNPNGTGQSPIQSEISALQSQQTTLQNYLNLVDAQIQDRVQQYENQLNKLNSVMQQAQA 496 Query: 453 TSSYLTQQFENNSNS 467 L+ F+++S++ Sbjct: 497 QMQQLSALFKSSSST 511 >UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYH3_9GAMM Length = 543 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 117/408 (28%), Positives = 200/408 (49%), Gaps = 22/408 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +S GV S + S++ + A + + + ++SAYG L S L Q+A Sbjct: 1 MSISGVLSSSQIQSLVKAAENQYNAPIATLQAEAKPLETEISAYGNLSSVLGGLQSAVQG 60 Query: 64 LSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L + L + ++ SAT + A G Y+++V+ LA AQ+L + T A Sbjct: 61 LMDLSSLTQVQANVGNSAILSATASNAAPTGSYSVTVSGLATAQSLYSSDYSSQTS---A 117 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 L+IQ G + + ID++++N +L G+ +AIN + AGV+AS++ G G YRL+V Sbjct: 118 IGTGTLSIQVG-NGAAVNIDVTSSNDTLDGLANAINQSGAGVTASVVYDGTG-YRLTVIG 175 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 N TG NA ++S +G + G+ ++ ++GM S AAQNA +VN +++ ++SNT S Sbjct: 176 NQTGSGNAFSISTTG----SALSGFSYASGASGMTESQAAQNATASVNGISLTSASNTFS 231 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 A+ ++ ++ TG+ ++++ TS AQ+AI+D+V A+N S T YT A Sbjct: 232 GAIPGVSFTVS--ATGSTSISVGVSTSDAQSAIQDFVQAFNKASSFIQSATAYTPASGTA 289 Query: 303 ------DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT----TDPSD 352 S + G L+GD ++ I+ QL S++S + S IG T S Sbjct: 290 AVSATGTVASGTAGPLIGDPVVQGIENQLLSIISTATAIGSGGAADAIGFGNIGITLTSS 349 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST 400 G + +D L +AL + + V L G + + ++ Sbjct: 350 GTITVDQSALNSALSSNYAQVMGLFGAMGGSNNPSVQFSGATSGTVAG 397 >UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 Tax=Citrobacter RepID=D2TJ96_CITRO Length = 439 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 120/426 (28%), Positives = 206/426 (48%), Gaps = 43/426 (10%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSAT-STTSSTTAFSATTAGNAI 91 + QQS A+ + TL SAL FQTA AL+ T S T++ + + T A Sbjct: 23 LQKQQSELDAESNGLDTLSSALNDFQTAIDALNSDTDGPVTFSATANNDSATITANSQAQ 82 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSS-- 149 AG Y+ V LAQAQ T + D T + T + + ID++AA+ + Sbjct: 83 AGTYSFYVEQLAQAQQSTFDLSDD-------TFSATGTFELTMGDSTMDIDLAAADQNGD 135 Query: 150 ------LSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDAL 201 S + AIN++ GVSA+++ +G + +TS TG +A ++S+SG DA Sbjct: 136 GDGYIDASELVSAINHSDDNPGVSAALVKT-DGATTIMLTSETTGAQSAFSVSISGHDAS 194 Query: 202 QSFMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDVTTG 258 D SA++ + AAQ+A + + AI NS+NT +D + +++ ++VT Sbjct: 195 G-----DTSATAPTLTEMTAAQDAIIHLGSATGPAITNSTNTFNDVIPGVSMTFSEVTGE 249 Query: 259 N---QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 N T T+ +D+S Q ++ +V+AYN+L+DT SLT + S S+S G GD Sbjct: 250 NDDLTTFTVAEDSSGTQAKVQTFVDAYNTLVDTVDSLTS-------SGSDSTSAGIFAGD 302 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 S L+++ +QL + + ++ GIT D G L++D+D A++++ G+ A Sbjct: 303 SGLKSLTSQLDDLAHASYGGV---SIVDYGITLDAH-GHLQIDSDAFNEAMEENPEGLTA 358 Query: 376 LIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 + VGD + + S+ GI+ + +K+ + + ++ + R Sbjct: 359 IFVGDDSMVAQMDELMESY--LDSSNGILTLRQQNIDDQQDKIQSEADRLTETYNNNYER 416 Query: 436 YKEQFT 441 Y E++T Sbjct: 417 YVEEYT 422 >UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6F7_9GAMM Length = 561 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 164/345 (47%), Gaps = 24/345 (6%) Query: 126 SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDT 185 I G D I++ A ++ + D IN A V+AS+ + G ++L S++ Sbjct: 230 GSFDISNGTDTATISV---LAGETIEQVVDKINAAGINVTASLEDDNAGGFKLVYQSSND 286 Query: 186 GLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN-VAIENSSNTISDA 244 ++ + ++ S D ++ + S + AA AQ+T+N + + + +NT +A Sbjct: 287 YGNHQVAIT-SADASMSKLL---KSHEYANFTENTAASKAQITLNGSIVVTSETNTFENA 342 Query: 245 LENITLNLNDV--TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 + ++L + T + + I D + A+K +V +YN + + LT+ Sbjct: 343 VAGLSLEVKKAHDATASDNIKINLDKGSTEEAVKKFVESYNEMFAVVAELTQVN------ 396 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITTDPSDGKLELDAD 360 + + G L+GDST+RT+ QL+ L V+ + T LA IGI T+ DG L L+ Sbjct: 397 --EDGTAGQLVGDSTIRTMMNQLRGALGGIVTIDKFSTQSLASIGIKTE-RDGTLSLNEA 453 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 LT L + GAL GD GI + + ++ + GI+++ + +++++ + Sbjct: 454 TLTKQLNSNFEQFGALFAGDE---GIGKALSNVVSEYKGIGGIVESKIKSATSSIDRINE 510 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + +R+ AR QFT +D+L++ L +T YLT Q + S Sbjct: 511 ERTDFDERMGRYEARLFSQFTTMDLLVSQLQATGDYLTAQLDALS 555 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 15/280 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPIS-NQQSSFTAKLSAYGTLKSALTTFQT 59 MA++SS G+G+G ++ + SL AA++ ++ T ++S G LKSAL+ Sbjct: 1 MATLSSPGIGTGFKVTETVQSLVAAEREPFDKKKLAAENKLTEQISGLGKLKSALSDLDD 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L FS S+ F+A A Y + V +A Q +TT Sbjct: 61 TIFDLKLPTTFSKRQVDYSSDFFTAEAGSAASVSSYDVQVNKVAAGQKVTTG----PIDA 116 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 + A L I+ G +I + A +++ I IN +A GV+AS++ +G Y Sbjct: 117 SAAIGSGTLEIRSLGLNKGFSIAVEAGQ-TINDIAAQINGSSANFGVTASVVKGDSGSY- 174 Query: 178 LSVTSNDTGLDNAMTLSVSGDDA-LQSFMGYDASASSNGMEVSVAAQNA--QLTVNNVAI 234 L+++SN TG ++ ++L+V+ D L G A S G S NA V + I Sbjct: 175 LTLSSNQTGDNSVLSLNVTDSDGFLHDDSGLSQLAFSYGETRSNQTFNAGESFAVGSFDI 234 Query: 235 ENSSNTIS-DALENITLN--LNDVTTGNQTLTITQDTSKA 271 N ++T + L T+ ++ + +T + + A Sbjct: 235 SNGTDTATISVLAGETIEQVVDKINAAGINVTASLEDDNA 274 >UniRef50_C5VT88 Flagellar cap protein FliD n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT88_CLOBO Length = 504 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 87/529 (16%), Positives = 187/529 (35%), Gaps = 106/529 (20%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN--- 61 G+ +G+D +++ + ++ + + + + Y + + Sbjct: 13 RITGLATGMDTDAMVKKMIMREQQRIDKANGDKQYNQWRQEEYIGIIKDTRELRDDFLLI 72 Query: 62 -----TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 T L ++D ++AT S A + A +G+Y I V +A+A T+ + T+D Sbjct: 73 SAPKETNLMRSDAYAATKAKSDNEGLIGARSMPGAKSGRYQIKVKDIARAATIEFKGTKD 132 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI-INVGNG 174 D + +++ I K + S+ +N Sbjct: 133 DV---------------------------------ANVKEEIKKIKPELLNSVEVNFSEL 159 Query: 175 EYRLSVTSNDTG----LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 ++S+ S +TG D +M S + + + + Q+ + V+ Sbjct: 160 TGKISIVSKETGKKISEDTSMKEISKALKGKYSLDYREIDGNPAEVYIKEPGQSEYIKVD 219 Query: 231 NVAIENSSNTISDALENITLNLNDVTT----------GNQTLTITQDTSKAQTAIKDWVN 280 + S N ++N+ +++ TT G+ + + +D S + IK +V Sbjct: 220 --SKYTSKNKF--VIDNMEYDISGATTSNIINTKDDNGSIAINVKKDVSSSVDKIKKFVE 275 Query: 281 AYNSLIDTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQT 323 YN L++ ++ + + + G + D ++ + + Sbjct: 276 KYNKLVEKLNTKVDEKKIYSYKPLTEEQKKAMKPEEVKEWEKKAKQGIIKNDMNVQQMLS 335 Query: 324 QLKSMLSNTVSSSSYKT--------LAQIGITTDPSD---GKLELDADKLTAALKKDASG 372 Q++ S + K+ L++IGITT G+L +D KLT AL++ + Sbjct: 336 QMRQAFYGGYSKDTSKSDHATFGISLSEIGITTSKETSKRGQLVIDESKLTKALEEKSDK 395 Query: 373 VGALIVGD---GKKTGITTTIGSNLTSWLSTTGIIKA--------------ATDGVSKTL 415 V L + GI I + ++ G + +SK + Sbjct: 396 VYELFTKSREGKESQGILNRITEVVDKFVGGHGGQDGILVKKSGYKDSRWLLNNDLSKKI 455 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K ++ + +Y + FT+L+V M +N+ SS+ Q Sbjct: 456 IEQEKQIKELERKMFTKQEQYYKMFTKLEVAMNKMNAQSSWFQAQMGGK 504 >UniRef50_C4V4Y4 Flagellar hook-associated protein 2 n=2 Tax=Selenomonas RepID=C4V4Y4_9FIRM Length = 547 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 104/540 (19%), Positives = 201/540 (37%), Gaps = 93/540 (17%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 GSG+D+ S++ +++ I ++ + A+ + S + F++ + + + Sbjct: 12 GSGIDVESLVKVGMMSEQKKYDRIYKKEVETEWRKEAFADVYSEVNAFRSNMSDMRLSSK 71 Query: 70 FSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA------ 122 + TSS + A +AT NA +T+ VT A L T + + +T A Sbjct: 72 TKPMTATSSLSDAVTATANANAGVMSHTVEVTQAASNAYLMTTSGQKVARTNTAAPTSVA 131 Query: 123 ----------------TSDSKLTIQQGGDKDPITIDISAA-----NSSLSGIRDAINNA- 160 ++D+ L+ + I +A N +L+ + INNA Sbjct: 132 LKDIAFAGGTMPAGMTSTDTALSFKLSNGTGTTEIKFTAEEVFTKNLTLNDLATRINNAR 191 Query: 161 ----KAGVSA--------------SIINVGNGEYRLSVTSNDTGLD---------NAMTL 193 SA SI+N +G S DTG N + L Sbjct: 192 FIGSDGKKSALNITASYDAVSDAFSIVNTQSGTNNKVSLSMDTGASSATYTTALLNNLKL 251 Query: 194 SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN-SSNTISDALENITLNL 252 + + + + S ++ +E A NA + V+ N N + + +T Sbjct: 252 GQVSGGTISAPLSFTISGTTAKLEA--AGTNASVKVDGRTYTNLQDNKLQ--VNGVTYTF 307 Query: 253 NDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS------------LTK---- 294 T +TI QD K +K +V YN L+D LTK Sbjct: 308 KKATPVGTPAQVTIAQDQEKLVENVKKFVEDYNKLLDDLHGRYNNNKYPDYGVLTKEQEA 367 Query: 295 -YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPS 351 + ++ + G L + +R+I + ++ ++N V S Y LA IGIT+ Sbjct: 368 GMSREQVDKWNERAKAGLLYRNDYVRSIISDMRDAVTNRVGSAPGRYNNLASIGITSKDQ 427 Query: 352 DGKLELDADKLTAALKKDASGVGALI---------VGDGKKTGITTTIGSNLTSWLSTTG 402 G L+LD KL A+ + V + +G T ++ +G + S S G Sbjct: 428 SGHLKLDETKLRNAIAAEPDAVKQIFSHTDEDDNYSDNGVATRLSERLGKRMESLKSHAG 487 Query: 403 IIKAATDG--VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + +D + K + + K + + + + +++ ++ ++ L++ + ++Q Sbjct: 488 MTADKSDRSELGKLIQEYEKQMSDFKKLMSSFENQLYKKYNAMEEAISRLSTQFGFFSRQ 547 >UniRef50_C4TU94 Flagellar hook-associated protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TU94_YERKR Length = 435 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 100/462 (21%), Positives = 189/462 (40%), Gaps = 56/462 (12%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTANTALSKAD-- 68 G+D+ ++ +T A ++ + + +A KS L+TF+ A LSK + Sbjct: 14 GIDVDALSKQVTQGLFAKRKEKQHKLEQQLKTQQAALDKQKSGLSTFRDALKDLSKVEEG 73 Query: 69 LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 L ++TS + + A+ G Y+ V LA A L T ++ S L Sbjct: 74 LLKNKTSTSIKEVATISANEKALKGTYSFFVEKLASAHQLAYTGL---TDASVKAEQSPL 130 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTG 186 + G + + +L+ + AIN+A GV+AS++ NG+ L +TS+ +G Sbjct: 131 GLTVNGQSFSVELK---GVETLADMAHAINHANDNPGVTASVVR-SNGQQILLLTSDKSG 186 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNTIS 242 N + S A S+ + A+++ + + + IE+SSNT+ Sbjct: 187 AANKIEFDGSRP----------AIFSTANQQELSLAEDSVVYIGDPSKGLKIESSSNTLD 236 Query: 243 DALENITLNLNDVTTGNQTL---TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 ++ +TL L V L I + ++ +T IK +++A+N SS ++ Sbjct: 237 KVIDGVTLELVKVQKVGDPLLEVKIEVEPAQTETQIKKFIDAFNGAKSAVSSNNNSDSLS 296 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 ++ L S++ KTL IG++ D +G L+LD+ Sbjct: 297 T-------------------ALKQNLNSLVGKLYGG---KTLGMIGVSFD-RNGDLKLDS 333 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKL 418 KLT LK + + L+ G G+ + L +L+ + G +K ++ ++ L Sbjct: 334 KKLTEVLKTSPTLITDLMSG---PDGLINKLDKALDPYLNASDGSLKVRSEMLAMRKTSL 390 Query: 419 TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + + + +F +L+ +M + ST QQ Sbjct: 391 ERTKEGLENSYARALKTNLLKFNRLNEMMDKMQSTMDMFDQQ 432 >UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 Tax=Yersinia enterocolitica (type O:9) RepID=A8KHX5_YEREN Length = 422 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 101/461 (21%), Positives = 196/461 (42%), Gaps = 57/461 (12%) Query: 13 LDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTANTALSKAD--L 69 +D+ S+ + +T A ++ + + +A KS LT F+TA L K + L Sbjct: 3 IDVESLSNQVTKGLFAKRKEKQHKLEQQLKTQQAALDKQKSGLTAFRTALKDLGKVEEGL 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 ++TS + + A+ G Y+ V LA A L T TA+ L Sbjct: 63 LKNKTSTSIKEVATVSANEKALKGNYSFFVEQLASAHQLAYTGL---TDTAVKAEQGPLD 119 Query: 130 IQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGL 187 + G+ + + +L+ + AINNA GV+AS++ NG+ L +TS+ +G Sbjct: 120 LTVNGESFSVELK---KVETLADLAHAINNAKDNPGVTASVVR-SNGQQILLLTSDKSGA 175 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNTISD 243 N + S A S N ++ +AQ++ + + N+ IE+SSNT+ Sbjct: 176 ANKIEFSG----------NSPAIFSGNSPKLLSSAQDSVVYIGDPSQNLKIESSSNTLDK 225 Query: 244 ALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ++ +T+ L + + + ++ +T IK +++A+N Sbjct: 226 VIDGVTIELTKAQKAGDPLLEIKVEVEPAQTETQIKKFIDAFN----------------- 268 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 S+ G+ DS ++ L S++ KTL IG++ D +G L+LD+ Sbjct: 269 ---GAKSAVGSNNSDSLSTALKQNLNSLVGKVYGG---KTLGMIGVSFD-RNGDLKLDSK 321 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLT 419 KLT LK + + L+ G G+ + L +L+ + G +K ++ ++ L Sbjct: 322 KLTEVLKTSPTLITDLMSG---SDGLIKKLDKALDPYLNASDGSLKMRSEMLATRKISLE 378 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 ++ + + +F +L+ ++ ++ST + +Q Sbjct: 379 RNKEGLENSYARVLKTNLLKFNRLNEMIDKMDSTMNMFNEQ 419 >UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4332 Length = 666 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 29/413 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + ++ G+ +G+D ++D L + + +++Q+++ T K +A+ TL++ L Q+ Sbjct: 9 SGLNFTGLATGIDTQKVIDGLNKINQQRIDRLNSQKTALTTKQTAFVTLQAQLFDLQSKT 68 Query: 62 TALSK---ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 AL++ + T+T+S +TA +A A+ G YT++V LA+ + + D Sbjct: 69 NALARSAGSAFDGRTATSSDSTAATAVAGTAAVPGTYTVNVVKLARGAQVASAGFADP-N 127 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV-GNGEYR 177 TA+ T K+T+ G + N++L G+ D+IN A V A+++ G E + Sbjct: 128 TALKTGTLKITVGSGTTTTVTV---GSQNNTLQGVADSINAAGGDVRATVVTDSGTSEAK 184 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN--VAIE 235 L VTS+ TG NA+++ SG + V AAQ+AQ+TV +++ Sbjct: 185 LLVTSSKTGAANAISVDASGLTGGSGQDLFTGGVP----TVLQAAQDAQVTVGGGALSVS 240 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 + +N I++ + ++LNL T+++ DTS A A++D+V +YN++ D +S T+Y Sbjct: 241 SPTNQINNVIAGVSLNLLKEGQ-TVTVSVAADTSGAVKAVQDFVTSYNAVKDLIASQTQY 299 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDG 353 +S++ + G LLG+ + + L S L++ V S L+ G++ + S G Sbjct: 300 -------NSETQTAGTLLGNRDVTALSDALASALTDAVPGLTGSTNRLSVAGLSFNDS-G 351 Query: 354 KLELDADKLTAALKKD----ASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 KL D+ KLT+AL A+G L G + T + T ST G Sbjct: 352 KLVFDSSKLTSALNDPSGTAAAGFKKLFGLSGSTSNADITFLAGGTKTQSTAG 404 Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Query: 383 KTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 G+ + + L S+L G KA TD ++ + K +D + A+ ++QF Sbjct: 580 TQGVASRLSQVLNSYLDPVAGRFKAITDTYNQQTANIDKTIVKQQAVLDDKTAQLQKQFA 639 Query: 442 QLDVLMTSLNSTSSYLTQQFENNSNS 467 ++ + +L + L ++NS Sbjct: 640 AMETAVNNLKGLQTQLAS-LATSTNS 664 >UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (FliD-like) n=8 Tax=Enterobacteriaceae RepID=Q5DY02_ECOLX Length = 438 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 40/441 (9%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSAT-STTSSTTAFSATTAGNAI 91 + +Q+ A+ S +L SAL+ FQ+A AL+ T + TS+ + + + A Sbjct: 23 LQEKQTELDAESSGLDSLSSALSDFQSAVDALNSDTDGPVTFAATSNNDSATVSANSQAQ 82 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSS-- 149 AG Y+ V LAQ Q T D ++ + G I + + N Sbjct: 83 AGSYSFFVEQLAQGQQTTFSMGDDAF-----SATGTFELTMGDSTMDIDLSAADQNGDGD 137 Query: 150 ----LSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQS 203 S + +AIN++ GVSA+++ +G + +TS+ TG +A ++SV+G DA Sbjct: 138 GFIDASELVNAINDSDDNPGVSAALVKT-DGTTTIMLTSDSTGAQSAFSVSVTGHDASND 196 Query: 204 FMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDVTTGN- 259 S S+ V +AQ+A + + AI NSSNT D + +T+ +V+ + Sbjct: 197 ------STSAPVATVVSSAQDAIIHLGSATGPAITNSSNTFDDVIPGVTMTFTEVSDSDS 250 Query: 260 --QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDST 317 T I++D+S +Q ++ +V+AYN+LIDT SLT + S+S G GD+ Sbjct: 251 DLTTFNISEDSSSSQEKVQTFVDAYNTLIDTVDSLTTHGD-------DSTSAGVFAGDAG 303 Query: 318 LRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI 377 L ++ QL + + + ++ GIT D G L++D+D+ + K+ G+ ++ Sbjct: 304 LSSLANQLDDIAHASYNGV---SIVDYGITLDSH-GHLQIDSDQFNDEMAKNPDGLTSIF 359 Query: 378 VGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 VGD + + T S+ GII + ++K+ + + +D +A RY Sbjct: 360 VGDNSMVAQMDDLINTYTD--SSNGIITLRQQNIDDQMSKIQDEGDQLTDTYNANYDRYL 417 Query: 438 EQFTQLDVLMTSLNSTSSYLT 458 E++T V + ++ ++ + Sbjct: 418 EEYTNTLVEVYTMKASMAAFA 438 >UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=4 Tax=Thermoanaerobacteraceae RepID=B7R845_9THEO Length = 620 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 89/395 (22%), Positives = 155/395 (39%), Gaps = 59/395 (14%) Query: 112 TTRDDTKTAIATSDSKLT---IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T + + + +T I + +PIT+ AN+++ DAIN + V AS Sbjct: 235 TKASTAQLGLGGATGVVTTSDITFKLNNEPITVK---ANATVQDFVDAINLNSSTVQASY 291 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 + + R+ +T+ ++ SG DA D + ++ Q+A T Sbjct: 292 DSASD---RIILTAKQ-----GYSIDFSGTDANGISFLNDTLKFTVSSPLA-KGQDAIFT 342 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 N V I +S+N ++ A N+TL + N TLT++ D K IK++V+ YN +I Sbjct: 343 FNGVQITSSTNNVTVAGINVTLTGTTASGQNITLTVSTDVDKIYNTIKNFVDTYNDVITQ 402 Query: 289 F-----------------SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 D + + +G L D TL L+ ++S+ Sbjct: 403 MYTKLTEKRYYDYPPLTDEQKQAMKENDIKLWEEKARSGDLANDETLMRAYYSLRQVVSS 462 Query: 332 TVSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVGDGKKT----- 384 TVS +L+ IGITT GKL +D KL A+ + V + G Sbjct: 463 TVSGVG--SLSSIGITTGQWYEGGKLYIDEAKLKDAIANNLDKVMQIFTGVYSSDGTTLV 520 Query: 385 --GITTTIGSNLTSWLSTTGIIKAATDGVSK----------------TLNKLTKDYNAAS 426 GI + + G++ A + +++ + ++ Sbjct: 521 SKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGNRIREIDDRIAEMQ 580 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 R+ RY QFTQL++ + +N+ S++L QQ Sbjct: 581 KRLKDLEDRYYRQFTQLEIFVGQMNTQSAWLNQQI 615 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 82/452 (18%), Positives = 161/452 (35%), Gaps = 71/452 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANT 62 + G+ +GLD SI+ L L ++ Q+ + + + + L + Sbjct: 15 LRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRDINAKLMNLRNNVVA 74 Query: 63 ALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT------TRD 115 +L F A + TSS + +AT NA+ G YT+SVT LA A + Sbjct: 75 SLRLQGTFMAKTVTSSNPSVATATAGANAVNGTYTLSVTQLATAAATASTDRIGAYYIDS 134 Query: 116 DTK---TAIATSDSKLTIQQ-GGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASII 169 D K A+ T+ S +T++ D + I +++++ + AIN+A G+ A+ Sbjct: 135 DNKIQYNALNTTGSDITLKLRNKDGTTFSDIIIPKDANINNVISAINSASKSTGIVATYD 194 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 + RL + SN TG ++ + S + +G + +S + ++ A AQL + Sbjct: 195 QNLD---RLFLVSNVTGDNSLIDFSGT------DVIGINFLSSKLKLPIT-KASTAQLGL 244 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +++ I+ L N + + A ++D+V+A N T Sbjct: 245 GGATGVVTTSDITFKLNNEPITVK-----------------ANATVQDFVDAINLNSSTV 287 Query: 290 SSLTKYTAVDAGADSQSSSNGALLG--DSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 + + ++ + G + + + LK +S+ ++ G+ Sbjct: 288 QASYDSASDRIILTAKQGYSIDFSGTDANGISFLNDTLKFTVSSPLAKGQDAIFTFNGVQ 347 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 S + + GI T+ S + T + Sbjct: 348 ITSSTNNVTV--------------------------AGINVTLTGTTASGQNITLTVSTD 381 Query: 408 TDGVSKTLNKLTKDYNAASDRI--DAQVARYK 437 D + T+ YN ++ RY Sbjct: 382 VDKIYNTIKNFVDTYNDVITQMYTKLTEKRYY 413 >UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 Tax=Zymomonas mobilis RepID=C8WBS7_ZYMMN Length = 564 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 126/413 (30%), Positives = 206/413 (49%), Gaps = 23/413 (5%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G GSGLD +++++ L AA + + + Q ++ + ++SA GT+ S L+ T+ ++L Sbjct: 39 GAGSGLDTTNLVNELVAASQDPIQQQLDTQSTTNSNRISALGTITSDLSALNTSLSSLVS 98 Query: 67 ADLFSATSTTSSTTAFSATTAGNA--IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + S T+ +AT + +I V LAQAQ+++T Sbjct: 99 GGSLLTQPSVSDTSVLTATAESGSRLSNLSGSIKVEQLAQAQSISTTAYDSSKTFDA--- 155 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 LT ++ID A SSLS + AIN +AG +A+++ +G+ +L +T Sbjct: 156 -GTLTFTNSYGSATVSID---AGSSLSDVAKAINKKQAGFTATVLTQSSGQQQLMITGM- 210 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 TG ++S SG S + YD SA+S M V+VAAQ+A+L+ NNV + SSNT D Sbjct: 211 TGDAYGFSVSGSGGA---SDINYDKSANSGSMTVNVAAQDAKLSYNNVEVTRSSNTFDDL 267 Query: 245 LENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADS 304 + +++NL ++ TL T+ TS + A+ ++V+AYN L S+ T + Sbjct: 268 ISGVSINLKSASSQPVTLGSTRQTSNVRQAVLNFVDAYNELYSDISTNTA-------IGT 320 Query: 305 QSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDADKLT 363 SSS GAL D+ +RT+++ L SM++ +SS SY TL +IG++ + DG L D +L Sbjct: 321 SSSSAGALANDAGVRTLKSSLNSMINQKLSSTGSYSTLGEIGVSIN-RDGTLTADTTQLD 379 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 AL D V AL + +I S++ T + T S + Sbjct: 380 TALANDPDSVEALFNPTQSTSNSAVSITSSIGKVTPGTYKLSDVTYDESGNIT 432 >UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 Tax=Vibrio RepID=FLIDP_VIBPA Length = 670 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 17/253 (6%) Query: 215 GMEVSVAAQNAQLTVNNVAIENS-SNTISDALENITLNLNDVTTGNQT---LTITQDTSK 270 GM A Q++++ ++ VA +S +N I DA+E + L L + N+ + + D Sbjct: 428 GMTEVQAGQDSEVLLDGVAKLSSHNNVIEDAIEGVDLTLKGKSEPNKPPAEIGVEYDRQS 487 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 ++ I+++V+AYNS T +L+ D + G L GDST+R+ ++LK++ S Sbjct: 488 VRSDIENFVSAYNSFYQTSQALSS-------VDPTTGQKGPLAGDSTVRSADSRLKAVFS 540 Query: 331 NTVS--SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 + + + K+L + GITT G LE++ D L L + + + G+ TG Sbjct: 541 SRIDQAPENLKSLTEFGITT-TRQGTLEINYDMLDRQLNNNFNELEKFFGGN---TGFAK 596 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 I + TG I+ +++ +L D A R++ R +FT + Sbjct: 597 RIEDAIHGITGITGSIRTREKSLTEQNYRLNDDQAALDRRMEGLEKRTHAKFTAMQDATG 656 Query: 449 SLNSTSSYLTQQF 461 + L Sbjct: 657 KMQGQLGALMSAL 669 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 12/200 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ +G+ G+D++S++ + A++ I N +++ A +SAYG L+ +L T + Sbjct: 2 SLGPVGMSGGMDINSMVSKIVDAERVPKQQRIDNDRTTINASISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F+ + T+ SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 62 ANFRQEKAFAVRTVETTDDNIVSATATTDAIAGKYAIDVLQLAQSHKVASDVLPEDAKF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL I G D+ I + + S L + IN A GV AS+IN G RL Sbjct: 121 ---GPGKLQISLGDDRFNIEV---RSRSKLIDVVRGINGAKDNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLSVSGD 198 + SN +G D+ + +SV + Sbjct: 174 ILASNLSGKDHQIKVSVEAE 193 >UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9L8_9DELT Length = 564 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 110/432 (25%), Positives = 194/432 (44%), Gaps = 31/432 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+ G+G+G D +S++ L ++ +T + + S+T K +A+ L S + + +T Sbjct: 16 GQITYTGLGNGTDFNSLITKLVQVEQGRITTLQTWKQSWTDKQTAFQKLNSEMLSLKTTL 75 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F S T+ ++ +T + TT NA G ++I+V LA A+ ++++T Sbjct: 76 EGMDSVGEFLSKTTDSTDSTILAVTTGANADNGSHSITVNRLATAKAMSSKTGYTSATED 135 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRL 178 I S S+++ + + AN +L+ + INN GV ASI+N G+ +Y L Sbjct: 136 INPSSSEVSFNYTYKGVTYS-NAIGANCTLTDLASIINNDPKNPGVKASIVNDGS-KYYL 193 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + DTG ++T+ + + L F D + +N + + T V I + Sbjct: 194 QLRGMDTGDSASLTI--ANNSGLSGFTNADFNTITNNASAQLKL-DGWPTDAGVWITRET 250 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N+++D L +TLNL T + T T T+ + I+ +V N++ LTK+ Sbjct: 251 NSVTDLLSGLTLNLKSTGTVDVTTTTD--TATVKKNIQTFVEQMNTVRTLLQDLTKF--- 305 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-----VSSSSYKTLAQIGITTDPSDG 353 DS + L G+ L+ I T LK+ ++ ++ Y TLAQ+GI TD S+G Sbjct: 306 ----DSTTQQASILTGNYGLQLIDTNLKTAVAGKGIGFDYTTDKYSTLAQLGIATDASEG 361 Query: 354 KLE-----LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 +D D L L +A V L + +T S + +G K T Sbjct: 362 STTEGLLVIDDDVLDDILSSNADAVAQLFSAQY----VGSTDSSEFSISSYISGTTKCGT 417 Query: 409 DGVSKTLNKLTK 420 ++ T + K Sbjct: 418 YDLAYTTDSSGK 429 >UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Treponema pallidum RepID=FLID_TREPA Length = 722 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 27/278 (9%) Query: 208 DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD 267 DA + + AQ+A + V + +N+I+D + +TL+L++ T +TL++T D Sbjct: 435 DAPGGYVPVNPASQAQDAAFDFDGVHVTRGTNSITDLIPGVTLSLHERTEKTETLSVTPD 494 Query: 268 TSKAQTAIKDWVNAYNSLIDTFSSLTKYTA---------VDAGADSQSSSNGALLGDSTL 318 + + AI ++V YN L+ + +T + ++ G+L GDSTL Sbjct: 495 VNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLTPEEKKKETEQLGSLHGDSTL 554 Query: 319 RTIQTQLKSMLSNTV---SSSSYKTLAQIGITTDPS----------DGKLELDADKLTAA 365 ++ +L+ SN + +TLA IGI+T G LE+D +KL ++ Sbjct: 555 LMLKDRLRRNTSNAYRAGDDGASRTLAHIGISTKAHASSGINTAQLRGYLEIDEEKLHSS 614 Query: 366 LKKDASGVGALIVGDGK-----KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 L V AL D G+ T+ L +L +GI ++GV + + K Sbjct: 615 LNAQKDQVRALFGHDSDGDLLVDNGVAFTLTELLNPYLGRSGIFAIRSNGVDERIKSTEK 674 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 +++ + + ++ +D + SL S + Sbjct: 675 RVETYDKQLEKKERELRHKYHTMDGALRSLQKQSDAIQ 712 Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 12/202 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+ + GVG+G +++ SL ++ + + + + +A ++ + A Sbjct: 1 MSDVRIPGVGAG-KYDNLIQSLMKKERIPRDNAAAKVKVYEVQNNALKDVERYARDLRDA 59 Query: 61 NTALSKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L + + +S+ AF+ +A +T+ V +AQ + +D Sbjct: 60 VKGLYSFNNPFAEKEAHSSNERAFTVDATRDAAEQNHTLRVKDIAQGDAFLSDPLPED-- 117 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGNGEYR 177 T G K I +S A+N ++ S I Sbjct: 118 --FRVPSGTYTFCIGEKK----ICVSWKGGHYRDFIRAVNKQGKDSLTLSEIKTSGASRA 171 Query: 178 LSVTSNDTGLDNAMTLSVSGDD 199 L S TG + ++ + D Sbjct: 172 LLFRSELTGKSSRLSFEDAALD 193 >UniRef50_A5L6M4 Putative uncharacterized protein n=2 Tax=Vibrionales RepID=A5L6M4_9GAMM Length = 440 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 100/460 (21%), Positives = 185/460 (40%), Gaps = 37/460 (8%) Query: 13 LDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D + + + + + S+ T+K SA G +K+AL + + +++ Sbjct: 3 VDAVQLASNFASLDVQPFELRYTQKLSTITSKTSAIGKVKTALQSLEDKIYEFTQSGSSL 62 Query: 72 ATSTTSS--TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 ++TS+ FS + + V +A + D+ +A+ + Sbjct: 63 TQTSTSTSSDDYFSLSVDSGVNDINLDVFVQQVASNHQVVFDANSVDSNDVMASG-GVFS 121 Query: 130 IQQGGDKDPITI----DISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDT 185 + QGG I I + + + S N+ G + + G ++ S + Sbjct: 122 VTQGGVTTDINIMDADTDVSGDVTYSEFVSYFNDQFDGSIQATLVKSQGSMKVLFGSENE 181 Query: 186 GLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTIS 242 G D A TLS G+D +S AQ+A + + + NSSNT Sbjct: 182 GADAAFTLSADAAS------GWDTVVASASAAPMQTAQDAVIALGGEFGTQLTNSSNTFE 235 Query: 243 DALENITLNLNDVTTG---NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 ++ + L L T+ I D S +++++V+AYNS + ++LT Sbjct: 236 SLIDGVDLTLTKSNNSGDSATTIEIGDDLSATVASLQEFVDAYNSAVTEITNLTA----- 290 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 + ++ + G L DS +R+I+ QL S++ + + L ++G+ D DGKL LD+ Sbjct: 291 --SGNEDETRGVLASDSAVRSIKNQLASVIRDDYNG---TRLFELGLEID-RDGKLSLDS 344 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKL 418 K +A L G G G+ S L +++ + G + D + +++ Sbjct: 345 SKFESAAAT--VDFETLFTGSG---GVFEAFESKLETYIDFSNGSLNRRIDTLDNEKSRI 399 Query: 419 TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 A R + RY QFTQL+ L + L+S S T Sbjct: 400 NDALAALDTRYETYYNRYLSQFTQLNSLSSQLDSVSGLFT 439 >UniRef50_Q2B1U4 Flagellar hook-associated protein n=2 Tax=Bacillus RepID=Q2B1U4_9BACI Length = 688 Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats. Identities = 79/364 (21%), Positives = 143/364 (39%), Gaps = 51/364 (14%) Query: 146 ANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT---LSVSGDDALQ 202 SL+ + + +N++ AGVS + + ++++T +TG + + + G + + Sbjct: 330 GTESLNNVINKVNSSSAGVSMFYDSFKD---KVTLTRTETGNFHGLDSNPVDKDGKEIAR 386 Query: 203 SFMGYDASASSNGM---------EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLN 253 + + D +S NA T+N + E SSNT + +T +L Sbjct: 387 TPLADDEIVTSGDFINRVLGFEKAAETGGDNAVFTINGLETERSSNTFD--ISGVTFSLK 444 Query: 254 DV-TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS---SLTKYTAVDAGADS----- 304 + ++I +T+ IK +V YN LI S KY + D Sbjct: 445 QTFSDAPVNISINNNTNAIFDNIKGFVEKYNELIGKIQGEISEEKYKSYTPLTDEQREQL 504 Query: 305 ---------QSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS----YKTLAQIGITTDP- 350 + + +G L D TL ++ T +++ +V+S YK L+ IGI T Sbjct: 505 SDKQQEQWEEKAKSGTLRRDPTLTSLLTSMRTDFYTSVNSEGINPLYKQLSAIGIKTTAN 564 Query: 351 --SDGKLELDADKLTAALKKDASGVGALIVGDGKKT---GITTTIGSNLTSWLST----- 400 GKLE++ +L A++ D + + L G GI + + + + Sbjct: 565 YLEGGKLEINEAELKKAIEADPASIEKLFNASGTTNDQKGIVQRLYDTVNTSMEKVKLKA 624 Query: 401 -TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + K L+ L K ++ R+ RY QFT ++ + N +YL Q Sbjct: 625 GNSFSTNQQFTMGKQLDSLNKSIDSFESRLTQVENRYWSQFTAMEKAIQRSNEQMAYLMQ 684 Query: 460 QFEN 463 QF Sbjct: 685 QFGG 688 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 8/158 (5%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D+ ++ L A++ L + ++ + Y ++ + L F+T T + + + A Sbjct: 1 MDIDQLVSDLMKAERMPLDKMKQKKQVMEWQRDDYRSMNTLLLNFRTELTQMKLSTSYRA 60 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTI--SVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 ST+S+ A TA +A A +V LA A T K L Sbjct: 61 RSTSSTNEARVTATATSAAALASYSISNVKKLASAATKVNTAALSADKEKKIDVSKSLLE 120 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 G + I + + IN A+AG S+ Sbjct: 121 SSGSFAEAIEWKTGSVET------KTINPAEAGKEFSL 152 >UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F276_9PROT Length = 785 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 99/408 (24%), Positives = 198/408 (48%), Gaps = 32/408 (7%) Query: 1 MASISSL-----GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALT 55 MA+ SS+ G +G D +D L +K ++ + +Q + TA+ A + +A++ Sbjct: 1 MATTSSIASLISGQVAGFDAQGAVDGLLGVRKFEISQLQKKQDTITARQDALLQINNAVS 60 Query: 56 TFQTANTALSKADLF--------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT 107 ++ ++ + F S++S S+++ + AG++ I V+ +AQA+ Sbjct: 61 GLRSTAIGMADSTAFFGYTASLASSSSAVSASSLLDVSGTSGVSAGQHNIIVSQVAQAER 120 Query: 108 LTTR-TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG--- 163 +++ +D T TA+A++ + + + T+ +S ++ SL+ I IN G Sbjct: 121 ISSSVAVKDSTGTAVASASTVMNLSGSFQLAGSTVTVSPSD-SLNDIAANINQLNTGASA 179 Query: 164 --VSASIINVGNGEYRLSVTSNDTGLDN-AMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 VSAS++ VG ++RL + S+ TG ++ + + + A+ +N + Sbjct: 180 TGVSASVMKVGTNDFRLILASDTTGATGFTLSGANLDAAGPLAALQLGATGQTNAYQSLQ 239 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWV 279 AQ+AQ++++ +++ S+N I+DAL +TL+L ++ I D + ++ +V Sbjct: 240 LAQDAQISIDGLSLTRSTNIITDALSGVTLSLKQADPAVTVSMNIGIDQQALRANVQSFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 +AYNSL S K+ D +++++G L GD L TIQ+ L + L +V S Sbjct: 300 DAYNSLQTMISDQFKF-------DPKTNTSGLLSGDPLLTTIQSNLSNSLFKSVPGLASD 352 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 +L IG+ D +G+L ++ ++ L D + + + V G T Sbjct: 353 RNSLVMIGVEPD-MNGQLMINENRFGTFLANDPTAIRDVFVAQGSSTN 399 Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 76/402 (18%), Positives = 147/402 (36%), Gaps = 25/402 (6%) Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 D+F A ++++ + T +G Y+++VT A LT T T ++ Sbjct: 389 DVFVAQGSSTNNSLQFLTNGLTTPSGTYSVNVTQAASKAVLTGTT----DLTPGLAANET 444 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 +TI G I+++A + S I A+N S + ++T+ Sbjct: 445 VTITDTGTSRQAAINLTAGQ-TQSQIISALN-----AELSTDYTEQHQLSTALTAGGLPA 498 Query: 188 DNAMTLSV------SGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 + TLS +GD S A ++ V A + T+ + + Sbjct: 499 TGSTTLSALGLGVAAGDTISISGTRRSGVAVNSSFTVLNPATDTVSTLLTAIQSAFNQEV 558 Query: 242 SDALENI-TLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ++ + L D+TTG+ L++ + + ++ + A Sbjct: 559 GATIDATGKVTLTDITTGDSQLSVALTANNQGGGTLAFGADTIVTNGRYALPEQAVASGN 618 Query: 301 GADSQSSSNGALLGDSTLRTI--QTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 +S S G G S ++ ++ T + S LA G + G + + Sbjct: 619 MISIESKSYGGGSGFSLSQSANGLGIANQTIAGTDVAGSINGLAATG-SGQMLTG-ISGN 676 Query: 359 ADKLTAALK-KDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D L+ VG L VG G + + + TG+I+ + T + Sbjct: 677 VDGLSLLYTGTTTGAVGNLTVGIGIASALDGILNQYSNPV---TGLIQNSMTQEQATFDS 733 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 +T +A + +++ Q QF+ + M SL ++SS+L+Q Sbjct: 734 MTAKIDALTRQMEQQRVSLTNQFSSMQQAMASLQNSSSFLSQ 775 >UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Listeria RepID=B8DI75_LISMH Length = 429 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 110/464 (23%), Positives = 209/464 (45%), Gaps = 47/464 (10%) Query: 9 VGSGLDLSSILDSLTAAQKATL----TPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 S +D + + QKA+L TP NQ SS+ +++ Y +LK+AL+ ++ Sbjct: 6 ASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLKTMSSF 65 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + + + +T+S+ T+F+ ++ +++ G Y+I V +LA A T + K ++ Sbjct: 66 TTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKIGVSG- 124 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 TI+ G + + A+SS+ + + IN+A A V+ I +G + VT+ Sbjct: 125 ----TIKINGKEIKV-----DADSSMKNVMNTINSAGAKVN--IYTLGEN---MVVTAAT 170 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 TG++N++ GD + +G +AA++A+L +N + +++N +++ Sbjct: 171 TGVENSIK--YEGDSTVLEALGLV-----QNSPDHLAAEDAKLRINGATVTSATNKVTNY 223 Query: 245 LENITLNLNDVTTGNQTLTITQDTS-KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 + +T+NL TTG + LTI + KA + I +VN YN+L T + T + Sbjct: 224 IPGVTINLKKETTGAEKLTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTIL---- 279 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 +S L + L + K TL GI+ D +G L++D + Sbjct: 280 --QASAADLEANRALNNVFQHKK----------DGNTLFDFGISVD-KEGVLKVDETAMK 326 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 + +D S V G G GI + +L +TG I T ++ +NKL Sbjct: 327 KMVAEDPSAVERFFFGIG---GIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLT 383 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + R D + +Q+ + +M ++ S + L + ++S Sbjct: 384 DITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDALIDGMNSS 427 >UniRef50_C2BUJ2 Flagellar hook-associated 2 domain protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUJ2_9ACTO Length = 564 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 97/544 (17%), Positives = 209/544 (38%), Gaps = 95/544 (17%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS G+G G + I+ L ++ L + ++Q+ + +++ + T+ + + + A Sbjct: 27 GISIPGLG-GFNTQGIVKQLMMLEQVPLRKLESKQNEYKSQVQSLQTMNTKFSNIKRAAW 85 Query: 63 A-----------LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 A+++ A TSS TT A G V +A+++ T Sbjct: 86 DVYGRASKESVRFDTAEIWEAAKATSSDPMVGVTTTPGAQVGSVEFDVLQVAKSKQATLD 145 Query: 112 TTRDDTKTAIATSDS---KLTIQQGGDKDPITIDISAANSSLSGIRDAINNA-KAGVSAS 167 A + K++I G I S ++++ AIN A +G+SA+ Sbjct: 146 LDGVKNLYDAAKAKGEPPKISIMIGDKITTI----SPSSATAPAFARAINAASDSGISAT 201 Query: 168 IIN-----VGNGEYRLSVTSNDTGLD-----------------NAMTLSVSGDDALQSFM 205 + G G+Y L +T +TG D NA T ++ Sbjct: 202 SVRVGDNPDGTGKYVLQITGKETGADKGDFKIFAGDITQGLGLNAKTSKTDAATNSAHYV 261 Query: 206 GYDASASS----------NGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDV 255 DA+A + + + + +A++ + SN I ++++ ++L++V Sbjct: 262 YEDAAALATAVRNTGVQEQALNIIHQSSDAKIRLLGQERTYGSNEI-QIMDHVKIDLSNV 320 Query: 256 TTGNQT---------------LTITQDTSKAQTAIKDWV----NAYNSLIDTFSSLTKYT 296 + T+D A ++ + +A N+L S+TK Sbjct: 321 VQKTNPDGTPLYTDALLKGVKVNATRDFDVAAGKMEKMMGALTDALNTLNRGMQSVTKEG 380 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK------TLAQIGITTDP 350 + + LG+S R ++ ++ ++S+ ++ + + +L+ G+ Sbjct: 381 IDPTTNKRFTYTAAGPLGNSEGRELKNKIMGLVSSGITVTDAEGKSQTYSLSTFGVGFSG 440 Query: 351 -----SDGK-------LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +DG+ L+ DA+K A++ + V ++V KK G + S+ Sbjct: 441 GVEKGADGQVHGSQVNLKFDAEKFKKAMESNPEKVQQVMVEFAKKVGDVASKVSDF---- 496 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T G + + + KT++ + DR+D + A+ +Q++ L+ ++ + ++L Sbjct: 497 -TEGSLTRSIESRQKTVSYYRDRISEYGDRLDRKEAQLYKQYSSLETMLARMQQQQTWLA 555 Query: 459 QQFE 462 Q Sbjct: 556 GQLS 559 >UniRef50_A6DX67 Possible flagellar hook-associated protein 2 (Filament cap protein) n=1 Tax=Roseovarius sp. TM1035 RepID=A6DX67_9RHOB Length = 541 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 30/384 (7%) Query: 10 GSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+G++++ + DSLT A+ A + + + +LS Y L+ A + Sbjct: 13 GTGINIAELADSLTQAEIAPRRALIAERIDRAEVRLSGYDRLRGQAEQMGDALELMRGLS 72 Query: 69 LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 S +S S+ + + + G I V+ LAQ+Q L+ + A + L Sbjct: 73 SRSLSSDNSAVS-VTVSDPGKVDLQNARIGVSQLAQSQVLSFVGFSEAEAEIGAGA---L 128 Query: 129 TIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T++ G G + TI SSL+ + +A+ ++ G+SA +I++G+G + Sbjct: 129 TVEFGNWSADVPPVFSAGTRTAQTITFQPG-SSLADMAEAL-SSLDGLSARVIDLGDGTF 186 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L V S +TG NA+ LSV+ DA +D SA G AQ+A+L++N +A+ Sbjct: 187 SLGVIS-ETGSQNALRLSVAA-DADPRMAQFDISAD-PGAVQVQGAQDAKLSLNGIAVTR 243 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SSN I D L +TLN+ T + L+ + A ++ +V+ N+ SLT Sbjct: 244 SSNQIDDLLPGVTLNVTGQTLSDANLSGRANVEGALEVMQSFVDIINATQGLVKSLTARG 303 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 + G G L GDS + ++S+LS L+ IGI T+ DG L Sbjct: 304 FGEGGV------AGDLAGDSLADGVLRGMQSVLSRGFGVKGV-HLSDIGIRTE-RDGSLS 355 Query: 357 LDADKLTAALKKDASGVGALIVGD 380 LDAD+ + AL + + + LI D Sbjct: 356 LDADRFSTALTANPALLDPLIRDD 379 >UniRef50_D1U369 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U369_9DELT Length = 569 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 103/405 (25%), Positives = 171/405 (42%), Gaps = 49/405 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++ G+G+G D I+++ + + + + L + L T Sbjct: 21 GEVTFAGLGNGTDFEEIIEATISGESYRKEAYEADKEETEYIIDLLEQLDTELQTLSETL 80 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT-TRTTRDDTKTA 120 + F S AT G A G +T+ V +AQ T + Sbjct: 81 EDMGS---FLVQDAVCSGDGVEATITGEAATGSHTVIVGQVAQGDVWAFTDLGYASSDET 137 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN---NAKAGVSASIINVGNGEYR 177 + T+ + L + G+ I I AA ++L G+ +N +A+ V+AS++N G+ Y Sbjct: 138 VTTTATTLELTYAGETISIDI---AAGTTLDGLVSTVNSSASARDKVTASLVNDGSN-YY 193 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 +T DTG DNA+T++ +GD G+DAS +N + A NA+L V+ Sbjct: 194 FVLTGADTGADNAVTVADTGD-----LTGWDASGFTN----TQTACNARLKVDGFPTGAD 244 Query: 233 -AIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 I+ S+NTI D + +TL L D T + +T+ DT ++D+V A N +I T Sbjct: 245 SWIQRSTNTIDDVITGMTLELTDTTGDDGLRITVGVDTDAIVEQVEDFVTAMNEIIYTMQ 304 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----------SSSSYKT 340 LT D + + + +Q+K+ LS+ V Y Sbjct: 305 VLTGRVEGDDEDSYTVD-------NYAMDLMYSQIKNTLSSGVLGFARYTEEDGGDVYNA 357 Query: 341 LAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD 380 L+QIGI+T+ + G+L LD D+L+ AL D V +L Sbjct: 358 LSQIGISTNDDEGSDSFGQLLLDTDELSEALANDPKAVASLFSTS 402 >UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=Vibrio RepID=C9NQ91_9VIBR Length = 674 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 20/267 (7%) Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI-SDALENITLN 251 + + D + +DA GM AAQ++++ ++ VA +S N I DA+E + L Sbjct: 412 IDQAQADLKSAQESFDA---YRGMSQVQAAQDSKVLLDGVAQLSSDNNIIEDAIEGVDLT 468 Query: 252 LNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSS 308 L + +T + I D + I+ +V+AYN L+ G D ++ + Sbjct: 469 LKGRSERGKTPSEIDIEYDRQGVRDDIEQFVSAYNQFYQVSQELS-------GVDPRTGA 521 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDPSDGKLELDADKLTAAL 366 G L GDS +R+ ++LKS+ S+ V + KTL + GITT G LE++ D L L Sbjct: 522 AGPLAGDSVVRSADSRLKSVFSSRVEPAPEDLKTLTEFGITT-TRQGTLEINYDMLDRQL 580 Query: 367 KKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAAS 426 + + + G+ G + + TG I+ + + +L D + Sbjct: 581 NNNFNKLEDFFGGN---QGFAKKVEDAIQGITGVTGSIRTRERSMVEQNYRLDDDQASLD 637 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNST 453 R+D+ R +FT + + + S Sbjct: 638 RRMDSLEKRTHAKFTAMQDATSKMQSQ 664 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 13/210 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S +G+ SG+D+++++ + +++ I N++ + +SAYG L+ +L T + Sbjct: 2 SFGPVGMNSGMDINAMVSKIVDSERVPKQQRIDNERGKIDSSISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + + F+A ++ T SAT AIAG+Y I V LAQ+ + + +D K Sbjct: 62 ASFRQEKAFAARKVESTDDTVVSATATTEAIAGRYAIDVLQLAQSHKIASDVLPEDAKF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL I G K + + NS L I IN + GV AS+IN G RL Sbjct: 121 ---GPGKLQISLGEKKFTVEVQ---ENSKLVDIVRGINGSKTNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLS-VSGDDALQSFMGY 207 V S+++G NA+ LS S D L + Y Sbjct: 174 IVASSNSGEQNALKLSVESAPDNLLKRLEY 203 >UniRef50_A3DHJ1 Flagellar hook-associated 2-like protein n=3 Tax=Clostridium thermocellum RepID=A3DHJ1_CLOTH Length = 838 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 91/420 (21%), Positives = 163/420 (38%), Gaps = 71/420 (16%) Query: 100 THLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 ++ L + +T IA D+ + G I + + AN++LS + +AIN+ Sbjct: 432 NRISLTTKLDSLSTIFKNDLNIADPDANVVFTING--QTIDVGKTYANATLSDVMNAINS 489 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASASSNGMEV 218 + AGV + ++ + R + S G + + L+ + + L MG Sbjct: 490 SSAGVKITYDSLND---RFIMESKTMGATSEIELTDTDPANGLLKAMGLIGGT------- 539 Query: 219 SVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 A +A+ ++ V ++ S+N + +E +T +L V++ + + D IK+ Sbjct: 540 YTAGTDAEFDLDGVTGMKRSTNEFT--IEGVTYSLKGVSSEPVKIDVKADIDAVVENIKN 597 Query: 278 WVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRT 320 +VN+YN ++ +S+ + D Q + +G L DS L Sbjct: 598 FVNSYNEMLAKINSVLTEERYRDYLPLTDDQKKAMSEDDIKLWEQKAKSGLLRSDSILEN 657 Query: 321 IQTQLKSMLSNTVSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIV 378 I T L+ L + V S +L QIGITT GKL +D +KL AAL + V L Sbjct: 658 IVTNLRRALYDKVEGCSL-SLYQIGITTGSYQDKGKLVIDEEKLRAALTDNYDAVVQLFT 716 Query: 379 GDGKKT------------------GITTTIGSNLTSWLSTT-----------------GI 403 + T GI I L + T G Sbjct: 717 QGSQYTYSEALNDPNKRAVRYKEAGIAQRIYDILQDNIRITRNANGKKGILLEKAGIAGD 776 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + + + + +I + Y +F ++ ++ ++NS S +LTQQF N Sbjct: 777 LTEYDNLIVNEIKAKETLIDEMLVKIYKKEEYYYSKFAAMEKMLDAMNSQSMWLTQQFSN 836 Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 102/288 (35%), Gaps = 26/288 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTT------- 56 I G+ SGLD +I++ L + ++A + I ++ K Y + + L + Sbjct: 14 IRLTGISSGLDTDAIIEQLMSVERAKVDKIKQEKQILEWKRDIYRDIINKLRSITDEYFN 73 Query: 57 -FQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 + S++ S ++S+ + + T +A + ++I+V LA A + Sbjct: 74 VLKPKTNFTSQSAFTSFKISSSNESVVTVTANASAASKVHSITVHSLASAAKIV---GTS 130 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 I S++ T+ G + +T+D +L + SA G G+ Sbjct: 131 GLVDGIKGSNAVNTLSLQGKEINVTLDGVTKTIALEDYTSLSDLETKLESALAKAFGTGK 190 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 + TG ++G S ++N S+ N Q N + Sbjct: 191 IDVV----TTGGSIEFKCLLNGST-------LSISDTANNYISSLGFSNGQ--KNFITGN 237 Query: 236 NSSNT-ISDALEN-ITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 + N+ S + + + + T ++ I+ +++ Sbjct: 238 SDVNSDFSLYTDGSFKITVGNGTAQTINISDATSIDDLVAKIQQAIDS 285 >UniRef50_A0LT48 Flagellar hook-associated 2 domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT48_ACIC1 Length = 664 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 102/356 (28%), Positives = 175/356 (49%), Gaps = 22/356 (6%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 G+ SGL+ ++I++++ T + NQ + AKL+AY + L Q+A A++ Sbjct: 33 GLISGLNTTAIINAIMQQAAQPQTNLKNQLTVEQAKLTAYQGINQQLAALQSAADAVTSP 92 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 + A + TSS+ + +A+ + A AG +T VT LA QT + T T T I T+ S Sbjct: 93 TTWQAMAVTSSSASVTASVSAGAQAGTFTFDVTQLASGQTSVSANTVSSTST-IVTTGSP 151 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGL 187 +T+ G + I+ + SL+ + IN+A GV ASI+ VG YRL ++S TG Sbjct: 152 VTLTVGSGSP---VTINTGDGSLAAVAAGINSANLGVQASIVQVGTSSYRLQLSSTSTGA 208 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALEN 247 D A T+S L S ++ ++++ ++V A T I + +NT + L Sbjct: 209 DTAFTISGLNGGPLGS---FNNTSTAQDAVITVGAG----TPGQYTISSHTNTFNQVLPG 261 Query: 248 ITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSS 307 +T ++ V +G +LT+T D S IK V+A N+++ + + T Y D + Sbjct: 262 LTFTVSQVASG-VSLTVTPDASGIADKIKAMVDAANAVLSSIDTATAY-------DPSNQ 313 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 L GD T+ I+ + S +S+ V ++ T + +T DG++ DA+ Sbjct: 314 QASVLTGDLTVNQIRNSILSAVSSIVGANQSATSVGLSVT---KDGQITFDANAFQ 366 >UniRef50_B7DR51 Flagellar hook-associated 2 domain protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DR51_9BACL Length = 509 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 134/493 (27%), Positives = 229/493 (46%), Gaps = 51/493 (10%) Query: 10 GSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+GL +S + L + L PI NQ SS +++ SA +L+SAL FQ A L+ Sbjct: 30 GTGLPVSQYVQDLQTILQQELEKPIQNQISSLSSQQSALTSLQSALQAFQQATETLASLQ 89 Query: 69 LFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT-SDS 126 +S +++S ++ S T + A G Y ISVT LA AQT + + T +T + Sbjct: 90 SWSTVQASSSDSSVLSVTASAGASIGTYQISVTQLASAQTTFQNSALQTSATGASTLASG 149 Query: 127 KLTIQQGGDKDPITIDIS-AANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSVTSN 183 L I ++ I+ N SL I +AIN ++ GV+A++++ G Y L+++S Sbjct: 150 TLVITPKTLNQGQSVSINIVQNESLQSIANAINQYTSQTGVAAAVLSTGQ-SYFLALSSV 208 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISD 243 TG T++ + + + + + AQ+AQ++V + + +NT ++ Sbjct: 209 QTGAAYGFTVTETNVGSSGDALTF---------QTDTQAQDAQISVGGQTLSSPTNTFAN 259 Query: 244 ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 + +TL +N +TG T+T++QDTS A A++ W++AYN+LIDT T YT GA Sbjct: 260 YIPGLTLQVN--STGTATVTVSQDTSGALKAVQTWMSAYNTLIDTIRQDTAYT---PGAG 314 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDGKLELD--- 358 + + G L GD + + ++ + +S+ VS+ S Y +LA IGI DPS G LE Sbjct: 315 TSAGQAGPLFGDPLAQELLQEIPAAVSSVVSNATSPYNSLASIGIVLDPSTGHLEFQSAS 374 Query: 359 ------------ADKLTAALKKDASGVGALIVGDGK-------KTGITTTIGSNLTSWL- 398 AL S V L +G+ + + L++ L Sbjct: 375 GFSSASGTLPDGQSIFQNALTSSLSNVEQLFGVVNTTASQAVPTSGVLGNLYNFLSTMLV 434 Query: 399 -----STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 + I+A + + L N +I +V +Y +Q +L+ +M + Sbjct: 435 GNPNGTGQSPIQAEINALGDEKTSLQNYLNLVDQQIQYRVQQYTDQLNRLNAVMQQAQAQ 494 Query: 454 SSYLTQQFENNSN 466 L+ F+ +S+ Sbjct: 495 MQQLSAMFKTSSS 507 >UniRef50_B0RKG7 Flagellar hook-associated protein 2 n=1 Tax=Herbaspirillum seropedicae RepID=B0RKG7_HERSE Length = 690 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 128/464 (27%), Positives = 211/464 (45%), Gaps = 29/464 (6%) Query: 20 DSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSST 79 + L++A A + N + + +K T A++ +D + S Sbjct: 238 EKLSSASIAPGSTFDNGLLAIKTGSGSTTIIKPTTNTLAGVRDAINSSDAGVNATIVSDG 297 Query: 80 TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD----SKLTIQQGGD 135 T TI +T + + T +A+ LT++ G Sbjct: 298 TNDHLVVTAKNSGSTNTIKITGTENFAVFNSDPSGTVTSPNVASGQTYSAGNLTLKVGDS 357 Query: 136 KDPIT-IDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLS 194 I + + N L+ ++ AINNA AGV+ASI N G+ ++ L +T + A++L+ Sbjct: 358 SFNIAPVANGSGNIDLTQVKLAINNANAGVTASITNDGSNDH-LVLTPTGSSATAAVSLT 416 Query: 195 VSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLND 254 + D A S +GM + A+L+++ V + + +N + + + +TLNL+ Sbjct: 417 GTSDYAGLSM---------SGMGQLSRRRTAKLSIDGVNVTSPTNKVENVISGVTLNLSK 467 Query: 255 VTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGAL 312 VTT N TL I+ DTS TA +V AYN+L + +T T Q++++ L Sbjct: 468 VTTSADNFTLNISNDTSGITTAANSFVTAYNTLAKAVAGMTAQTPSTTLG--QANTSAPL 525 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSS-SYKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 +S+++TI +QL++ L +TV TL+ IGI+ DG L LD+ KL+ A + + Sbjct: 526 ASESSVQTIMSQLRNTLFSTVDGGNGINTLSDIGISFQ-KDGTLALDSTKLSTAATNNFA 584 Query: 372 GVGALIVGDG--------KKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 G+ L G K GI T + + +TS LS GII T G+ +L Sbjct: 585 GIANLFAGTDPDPTNTTSSKNGIVTKLQTLMTSLLSDNGIIATKTSGLQASLKINQDRQT 644 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 A R+ Y QF QL++ ++S+ ST SYLTQQ N + S Sbjct: 645 AVQSRLSNLKDAYTNQFNQLNLTLSSMQSTQSYLTQQLANLAKS 688 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 10/214 (4%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 LD+++++ L +A+ ++ LTP++ Q SS+ +SAYG+LKSA++T+Q+A A++ A + Sbjct: 15 LDVATLVSQLISAESQSQLTPLTTQASSYNTLISAYGSLKSAMSTYQSAIKAMTSASFSA 74 Query: 72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ 131 S+ S+ A T N ++ + + L + + + Sbjct: 75 QKSSVSN-----AGTGSNLTTDPFSADINGDDSTKILAQKIQSAGISSGTTFNAGDSIAI 129 Query: 132 QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAM 191 + G P+ + + A NS+L+G+RDAIN K G +ASI+ G G++ L + SN G N + Sbjct: 130 KIGTNSPVFVTLQA-NSTLAGVRDAINAGKTGATASIVTDGAGDH-LVLESNTGGTANTI 187 Query: 192 TLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 + + +++L F +S++ + M + A ++A Sbjct: 188 KV--TANNSLSGFFYDPSSSTPSTMTQTQAPRDA 219 >UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=A7GYT4_CAMC5 Length = 591 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 94/413 (22%), Positives = 174/413 (42%), Gaps = 42/413 (10%) Query: 1 MASISSLGVGSG--LDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 + SI++LG G+ +++ L A ++A + PI+++ + LK+ ++ Sbjct: 3 VGSITNLGFGTNNSALNDELVNKLKKADEEAQIKPITSRIEKNEIRQKDLAALKTLVSNV 62 Query: 58 QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + +L+ L+ +S+ TA S T A + + V +AQ T + T Sbjct: 63 NVSAKSLASETLYLKRQVSSTGTAASITAASGVSIQSFDLDVKQVAQRDTYQSSKFYSST 122 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINV-GNGE 175 T + ++ G+K I + +++ I D IN G + A I+NV G+ Sbjct: 123 SLLGLTQNGSFDVEINGNKYSIGVT---KSTTYQDIVDKINEVSGGNLQARILNVGGSNP 179 Query: 176 YRLSVTSNDTGLDNAMTLSVS-----------------GDDALQSFMGYDAS---ASSNG 215 Y++ + S DTG + S DD+ D + S+ Sbjct: 180 YQIMLQSADTGAKQTIKFSNDTAGVLEKLGWDSNQIPVTDDSGNPVYNSDGTQKFTSNLE 239 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 ++AQ+A N V + + NTI D +T+ L + TG + +I QDT+ A+ Sbjct: 240 KNKLMSAQDAIFNYNGVNVTRTKNTIDDLRPGVTITLKE--TGKSSFSIGQDTTDVAKAV 297 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 ++++ YN ++ T Y + +G+ G S + +I++ + + + Sbjct: 298 EEFIKDYNLMVTNLGIATNY--------DEEKGSGSFQGRSEITSIRSTISRLTTGQ--D 347 Query: 336 SSYKTLAQIGITTDPSDGKLELDA-DKLTAALKKDASGVGALIVGDGKKTGIT 387 K L++ GI TD DGKL LD + L+ AL + V +G K I+ Sbjct: 348 DEGKALSKFGIITD-KDGKLMLDDKNTLSKALSSNLEEVQKFFMGSSKIETIS 399 >UniRef50_C5A8U2 FliD n=2 Tax=Burkholderia glumae RepID=C5A8U2_BURGB Length = 518 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 145/495 (29%), Positives = 250/495 (50%), Gaps = 44/495 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS +GL++++++ +L ++ A + +S + K AY L++ALTT Q++ T Sbjct: 30 ISGSTGNTGLNVTTLVTALVNSKTAAQASLLSTAIAQNQNKSQAYTALQTALTTLQSSLT 89 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 LS + T+S T +AT A+AG Y I VT +AQ+Q+L++ + + Sbjct: 90 TLSDGSFAQTFTATASGTGLTATAGSGAVAGTYQIGVTQIAQSQSLSSPAFGANKQLGAG 149 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 T + + T++I++ N++L+GI+DAINNA GV+A+I+N +G + L + Sbjct: 150 TLTLSI------NGKSSTVNINSNNNTLAGIKDAINNASDNPGVTATIVNGADGAH-LVL 202 Query: 181 TSNDTGLDNAMTL----------------SVSGDDALQSFMGYDASASSNGMEVSVAAQN 224 +S ++G NA+++ S S QS + + ++ S AAQ+ Sbjct: 203 SSANSGAANAISVSVNATTDNGLSELGVTSKSSTTGGQSTITSAGTTAATSWTQSTAAQD 262 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVT------TGNQTLTITQDTSKAQTAIKDW 278 AQ TV +A +++NT++ A+ +TLNL QTLTI DT+K AI + Sbjct: 263 AQFTVGGIANSSATNTVTSAIAGVTLNLTQAAVSTATPATTQTLTIAADTTKQTAAITTF 322 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 V YN+L+ ++ Y+ A S + + G L GDS L +IQTQL SML +VSS+ Sbjct: 323 VQNYNALVTAMQTVGSYSTT---AGSSTPTVGTLFGDSALNSIQTQLSSMLGGSVSSNGV 379 Query: 339 K-TLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 TL+ +GI+ G L ++ LT L +L G+ + + Sbjct: 380 TATLSSLGISVSDGSDGATAGDLVINQATLTTTLSSKPGVAASLF---NSTNGLGAKMNN 436 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 +TS +ST G++ + + V+ TL L+ +A + +Y QFTQL+ ++ ++ + Sbjct: 437 AITSIMSTHGVLTQSENSVTSTLTSLSSQQSALAAYAKTLTTQYNAQFTQLNTVLAAMTT 496 Query: 453 TSSYLTQQFENNSNS 467 +YLTQ F +++ Sbjct: 497 NQNYLTQLFGGTNSA 511 >UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=Vibrionales RepID=Q7MIM7_VIBVY Length = 701 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 17/275 (6%) Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI-SDALENITLN 251 L Q ++ + +GM Q+A + ++ VA +S+N I DA+E + L Sbjct: 437 LERIDQANEQLKQAQESFDTYSGMTEVQQGQDAMVVLDGVAQLSSNNNIIEDAIEGVDLA 496 Query: 252 LNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSS 308 L VT + + D + I+ +V AYN T +L+ G D + Sbjct: 497 LKGVTPKNKAPAEIGVEYDRQSVRDDIETFVAAYNQFYQTSKALS-------GVDPTTGQ 549 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELDADKLTAAL 366 G L GDST+R ++LKS+ S + + + K+L + GITT G LE++ D L L Sbjct: 550 KGPLAGDSTVRNADSRLKSVFSTRIEKAPENLKSLTEFGITT-TRQGTLEINYDMLDRQL 608 Query: 367 KKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAAS 426 + + + G+ TG + + TG I+ +S+ +L + A Sbjct: 609 NNNFNRLEEFFGGN---TGFAKRVEDAIHGITGVTGSIRTREKSLSEQNYRLVDEQAALD 665 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 R+ + R +FT + + + L Sbjct: 666 RRMGSLEQRTHSKFTAMQDATSKMQGQLGALMNAL 700 Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M S+ LG+ G+D++S++ + A++ I N+++ + +SAYG L+ +L T + Sbjct: 1 MMSLGPLGMSGGMDINSMVSKVVDAERVPKQQRIDNERARIDSSISAYGRLRESLDTMKN 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + F+ T+ + SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 61 LMANFRQEKAFAVRKVDTTDDSVVSATATTDAIAGKYAIDVLQLAQSHKVASDVLAEDDK 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 KL I G + + +A+S L + IN A GV ASIIN G Sbjct: 121 F----GPGKLQISLGDKSFDVNV---SADSKLVDVVRGINGASKNLGVRASIINDVEGP- 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGD 198 RL V S +G +N + + V + Sbjct: 173 RLIVASTVSGKENQIRIHVDAE 194 >UniRef50_A8ERB3 Flagellar hook-associated protein 2 n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERB3_ARCB4 Length = 445 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 119/476 (25%), Positives = 211/476 (44%), Gaps = 41/476 (8%) Query: 1 MASISSLGV-GSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + LG GS ++++ L A KA+ +TP+ + FT + +++ + Sbjct: 1 MAGVLGLGSSGSTSLNEALIEKLKEADKASSVTPLEKKLEKFTTEKEVVANIQTKVNELL 60 Query: 59 TANTALSKADLFSATS-------TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 +A S A + T F + +G ++ V LAQ ++ Sbjct: 61 SAVKVFSLNQTTGANAFQQKSANVTGDGVVFDSDDLSALKSGSLSVKVEQLAQKDVWQSK 120 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 D T T ++ ++ T+ G I N S S + IN GV AS++ Sbjct: 121 QF-DGTTTTKSSLVNQGTLNINGTS------IDTTNKSYSDLVTEINKIS-GVQASLVED 172 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 G++RLS+ S++TG N + + S AL F D + + + AQ+ ++ V+ Sbjct: 173 STGKFRLSIKSSETGESNKINFTGSDSTALSHFGFDDTTNN------VLKAQDMKMKVDG 226 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 V SSNTI+ ++ + + + +TG T+ I D S +T ++ +V AYN+L S Sbjct: 227 VDYSGSSNTIT--IDGLKITASK-STGESTINIEDDNSNIKTQMQAFVTAYNTLNTLISG 283 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 T G +++R + +QLK L T S KT+ G + D S Sbjct: 284 EVYSTDSSLGDK------------ASIRNVMSQLKEQLFGTGSGD--KTIFSYGFSFDSS 329 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 +G L L + + A+K D G+ L VG +K GI TT+ +++ +I ++ + Sbjct: 330 NGNLVLSSTEFDNAIKNDKEGLQNLFVGVAEKKGIATTLDELISNSGINKDLIDYESNML 389 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 S+ KLT+ +AA + +DA+ EQF ++T + ++ S L + ++ S Sbjct: 390 SRE-TKLTEQKDAAQEALDAKYKLMSEQFAAYTTIITQMENSFSGLKMLIQQSTAS 444 >UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1P993_BACCO Length = 694 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 87/357 (24%), Positives = 148/357 (41%), Gaps = 42/357 (11%) Query: 145 AANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF 204 A+ +L+ + +NN+ G++ + ++T +TG N+ + +G++ + S Sbjct: 343 GADKTLNDVISKVNNSNLGLTMYYDEYKD---MFTLTRKETGNFNSSSSVDNGNEIIISS 399 Query: 205 MG----YDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ 260 + NA +N + E +SNT A+ +T L Sbjct: 400 DTDTYDFLRDTLKFSGSTEYGGTNAVFNINGLDTERTSNTF--AINGVTYTLKSKFDTPV 457 Query: 261 TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGAD 303 T+T++ DT IKD+V+ YNSLID S + T Sbjct: 458 TVTVSNDTDTIFKNIKDFVDQYNSLIDAVQSKLNEDRYPDYAPLTDDQRKELTDTQQDQW 517 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVS----SSSYKTLAQIGITTDP---SDGKLE 356 + + +G L D TL++ + ++S++ + V+ SS Y L+ IGITT GKLE Sbjct: 518 DKKARSGLLRNDMTLKSSLSNMRSLIYSKVNNANISSEYSQLSSIGITTTSDWLEGGKLE 577 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKT---GITTTIGSNLTSWLST------TGIIKAA 407 +D DKL AA++ D V L G T GI + ++ +T Sbjct: 578 IDEDKLKAAIQNDPDSVELLFRASGSTTSEKGIVQRLYDSVNQTYNTIVDKAGKSTYVNT 637 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K +N LT + +D++D RY QFT ++ + NS +YL+ F Sbjct: 638 QFTIGKNINDLTDKISDMNDKLDKLEDRYYAQFTAMEQAIQKYNSQYTYLSSFFSQQ 694 Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 99/276 (35%), Gaps = 21/276 (7%) Query: 1 MASI-SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M SI G+ SG+D+ SI++ + A K L + Q+ + Y TL F++ Sbjct: 1 MTSIQRITGLASGMDIDSIVEKMMTAAKQPLVKLQQQKQILEWQEEDYRTLNQKYFDFRS 60 Query: 60 ANTALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDDT 117 + + + A +TTSS + +AT A NA G TI SVT LA A T Sbjct: 61 TLSNMKLTSKYRARTTTSSNESYVTATAANNASLGSTTIQSVTQLATAATRVAAAPISTD 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + L Q G I + +S A ++ S + G Sbjct: 121 SSNKVDLNQSLWKQSGNFSGSIE---WSQGGVISDTITAKGDSTDPTSVTFDLKGTLNSN 177 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 + + G + S + S N + ++ A A L N+ + Sbjct: 178 MPMNVKMNGKTYEVVTDPS------------VTLSDNQVLLTTAGGQATLKFNSNISAGT 225 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQT 273 S ++ ++ T T + T +I D T Sbjct: 226 SISVEYVVDKAT---KSATVSSDTKSIQLDFGDIIT 258 >UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herbaspirillum seropedicae RepID=B0RKG2_HERSE Length = 676 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 22/396 (5%) Query: 76 TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGD 135 T+ +A AG+A + T + A + T T S L +Q G Sbjct: 298 TNDHLVLTAKDAGSANTLRVTGTGNFAAFNFDPSGTITTTGVATNQTYSSGSLALQVGSK 357 Query: 136 KDPITIDISAANSS--LSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTL 193 I + + L+ + AIN+A GV+ASI N G+ ++ L +T + T Sbjct: 358 SFTINPTDLDGSGAIGLNDVMKAINDANTGVTASITNDGSKDH-LVLTPSGT-------- 408 Query: 194 SVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLN 253 D + G + + + M AQ+A+LTV+ V + ++SN +++ + +TLNL+ Sbjct: 409 ----DAVKLTGAGDYSDLAGSSMGQLAKAQDAKLTVDGVTVTSTSNKVTNVISGVTLNLS 464 Query: 254 DVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGA 311 VTT N +L+I DTS TA +V AYN+L ++LTK T + Q+S+ Sbjct: 465 KVTTSADNFSLSINNDTSGLSTAANTFVTAYNTLAKAVANLTKQTP--STTKGQASTGSP 522 Query: 312 LLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 L +S++ + Q+++ + + + L+QIGI+ DG L LDA KLT A KD Sbjct: 523 LASESSVLALMGQVRNTMLGALGDNGATNLSQIGISFQ-KDGTLALDATKLTNAANKDFD 581 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 G+ L G+ + + L +G++ + T G+ +L +T AA+ R+ Sbjct: 582 GITQLFT--SATNGVVPKLQKLMDGILGESGVLASKTKGLQDSLKIVTDQQTAANARLQD 639 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 Y QF +L+V + ++ S SYLTQQ S S Sbjct: 640 LKDTYTNQFNRLNVTLATMQSRQSYLTQQLAKLSKS 675 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 10/214 (4%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 LD++++++ L + + K+ LTP+ N++SSF +SAYG+LK+A T++Q+A L+ A + Sbjct: 15 LDVATLVNQLISVESKSRLTPLKNKESSFNTLISAYGSLKNAFTSYQSALKTLTAASFSA 74 Query: 72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ 131 +T S+ A T N +T T+ ++ + + + TA T ++ ++ Sbjct: 75 QKTTLSN-----AGTGTNLTTDPFTAD-TNTDESTKVLAQKLQSAGFTAGQTFNAGDSVA 128 Query: 132 QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAM 191 + T AN++L+G+RDAIN AKAGV+ASI G+G++ L + SN G N + Sbjct: 129 IKVGTNQPTFITLQANATLAGVRDAINAAKAGVTASITTDGSGDH-LVLESNTGGTANTI 187 Query: 192 TLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 + + +++L S +S S+ + A ++A Sbjct: 188 KI--TANNSLSSLAYDPSSNVSSTVTQIQAPRDA 219 >UniRef50_UPI0001914446 flagellar capping protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. J185 RepID=UPI0001914446 Length = 239 Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 158/240 (65%), Gaps = 4/240 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS L L +L LT +K LTPI+ QQS+ +AKL+AYGTLKSAL FQTA Sbjct: 1 MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTAL+KADLF +T +S+T +T A AG Y ISVT LA AQ+L T+TT TK Sbjct: 61 NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKISVTQLAAAQSLATKTTFATTKEQ 120 Query: 121 IA---TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + + I+Q G K+P+ I + ++S+ IRDAIN+A +G++ASI+ V E++ Sbjct: 121 LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +T+N +G DN M ++V GD L + YD++ ++ M+ V A+NA+L VN + IE Sbjct: 181 LVLTAN-SGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQ 239 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 T... 339 1e-91 UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 T... 332 2e-89 UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Ent... 325 2e-87 UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=... 324 6e-87 UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax... 323 1e-86 UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 T... 321 5e-86 UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbio... 319 1e-85 UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Ent... 318 2e-85 UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum ... 314 5e-84 UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thio... 312 2e-83 UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 T... 311 3e-83 UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Prov... 309 2e-82 UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Ent... 307 5e-82 UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=G... 306 1e-81 UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 T... 304 3e-81 UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 T... 304 4e-81 UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 T... 303 9e-81 UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2... 303 1e-80 UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 T... 301 4e-80 UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Fila... 295 2e-78 UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=A... 294 7e-78 UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax... 293 1e-77 UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yers... 293 1e-77 UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdello... 289 1e-76 UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:... 285 2e-75 UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 T... 285 3e-75 UniRef50_C5D7S5 Flagellar hook-associated 2 domain protein n=7 T... 284 5e-75 UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax... 283 1e-74 UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Ent... 281 4e-74 UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Ente... 279 1e-73 UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 T... 278 2e-73 UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 T... 277 7e-73 UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarc... 276 1e-72 UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pect... 276 1e-72 UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID... 276 1e-72 UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protei... 276 2e-72 UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=P... 275 2e-72 UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carb... 275 2e-72 UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax... 275 3e-72 UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Ocea... 274 4e-72 UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 T... 273 7e-72 UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 T... 273 1e-71 UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 ... 269 1e-70 UniRef50_D2LUB9 Flagellar hook-associated 2 domain protein n=1 T... 269 2e-70 UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 T... 268 4e-70 UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacil... 267 5e-70 UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 T... 267 5e-70 UniRef50_Q9K6W0 Flagellar hook-associated protein 2 n=1 Tax=Baci... 266 1e-69 UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brev... 266 1e-69 UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Baci... 266 2e-69 UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomon... 264 7e-69 UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alte... 263 1e-68 UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 262 1e-68 UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfu... 260 7e-68 UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax... 260 7e-68 UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium pe... 260 8e-68 UniRef50_B0TH38 Flagellar hook-associated protein 2 n=1 Tax=Heli... 260 8e-68 UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillu... 260 1e-67 UniRef50_C0GJK0 Flagellar hook-associated 2 domain protein n=1 T... 260 1e-67 UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 T... 259 2e-67 UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Baci... 259 2e-67 UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 T... 256 1e-66 UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 T... 256 2e-66 UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax... 256 2e-66 UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bord... 255 2e-66 UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 T... 254 4e-66 UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 T... 254 6e-66 UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina Rep... 254 6e-66 UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 T... 254 7e-66 UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 T... 253 1e-65 UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 T... 251 4e-65 UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodofe... 251 6e-65 UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter k... 250 8e-65 UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alterom... 250 8e-65 UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma p... 250 1e-64 UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thio... 249 2e-64 UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 T... 249 2e-64 UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 T... 247 5e-64 UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paen... 246 2e-63 UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 T... 246 2e-63 UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 T... 245 2e-63 UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paeniba... 245 3e-63 UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=B... 245 3e-63 UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 244 5e-63 UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 T... 244 6e-63 UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17... 243 8e-63 UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitr... 243 1e-62 UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 T... 243 1e-62 UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betapro... 242 2e-62 UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 T... 242 3e-62 UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 T... 242 3e-62 UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax... 241 3e-62 UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax... 241 5e-62 UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 T... 241 6e-62 UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax... 241 7e-62 UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n... 240 8e-62 UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 T... 240 1e-61 UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 T... 239 1e-61 UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp... 239 2e-61 UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD... 237 5e-61 UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 T... 237 7e-61 UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein,... 237 8e-61 UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 T... 236 1e-60 UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 T... 236 1e-60 UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=mari... 236 1e-60 UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 T... 235 3e-60 UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadale... 234 4e-60 UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas s... 234 4e-60 UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax... 232 2e-59 UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 T... 232 3e-59 UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 T... 231 3e-59 UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 T... 231 4e-59 UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Fi... 230 1e-58 UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas p... 229 1e-58 UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 T... 229 2e-58 UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseu... 229 2e-58 UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 T... 228 4e-58 UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 Fli... 228 4e-58 UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkhol... 227 8e-58 UniRef50_B2A823 Flagellar hook-associated 2 domain protein n=1 T... 227 8e-58 UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 T... 226 1e-57 UniRef50_A6F9P0 Flagellar distal capping protein-like protein La... 226 1e-57 UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 T... 226 1e-57 UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=H... 226 2e-57 UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament ca... 226 2e-57 UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 T... 226 2e-57 UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 T... 224 4e-57 UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagell... 224 4e-57 UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Jant... 224 5e-57 UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella mar... 224 5e-57 UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 T... 224 6e-57 UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curviba... 224 7e-57 UniRef50_C4L5M8 Flagellar hook-associated 2 domain protein n=1 T... 223 1e-56 UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacteri... 223 1e-56 UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnob... 223 1e-56 UniRef50_C4G7B8 Putative uncharacterized protein n=1 Tax=Abiotro... 222 2e-56 UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 T... 222 2e-56 UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 T... 221 4e-56 UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aero... 220 1e-55 UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 T... 220 1e-55 UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia ... 219 1e-55 UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejue... 219 2e-55 UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphi... 217 5e-55 UniRef50_Q893U0 Flagellar cap protein fliD n=1 Tax=Clostridium t... 217 6e-55 UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax... 217 8e-55 UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1... 217 8e-55 UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 T... 217 9e-55 UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein... 216 1e-54 UniRef50_A4G682 Putative flagellar hook-associated protein 2 Fli... 216 2e-54 UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax... 216 2e-54 UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. ... 216 2e-54 UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=G... 215 2e-54 UniRef50_A3WGR1 Flagellar hook-associated protein 2 n=1 Tax=Eryt... 215 3e-54 UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 T... 215 4e-54 UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanth... 214 4e-54 UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Entero... 214 5e-54 UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 T... 213 9e-54 UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UU... 213 1e-53 UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n... 212 3e-53 UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 T... 211 5e-53 UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=g... 210 6e-53 UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorell... 210 9e-53 UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Rein... 210 9e-53 UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photoba... 210 1e-52 UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:... 209 1e-52 UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei g... 209 1e-52 UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 T... 209 2e-52 UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gamm... 209 3e-52 UniRef50_Q63DA1 Flagellar hook-associated protein 2 n=10 Tax=Bac... 208 3e-52 UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cell... 208 3e-52 UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromo... 208 4e-52 UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 T... 206 1e-51 UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 T... 206 2e-51 UniRef50_A0Q000 Flagellar cap protein fliD n=1 Tax=Clostridium n... 205 2e-51 UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus... 205 2e-51 UniRef50_O67805 Flagellar hook-associated protein 2 n=1 Tax=Aqui... 205 3e-51 UniRef50_A9VNE8 Flagellar hook-associated 2 domain protein n=20 ... 205 3e-51 UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candida... 205 3e-51 UniRef50_C5VT88 Flagellar cap protein FliD n=1 Tax=Clostridium b... 204 5e-51 UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=... 204 6e-51 UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 T... 204 6e-51 UniRef50_C2BUJ2 Flagellar hook-associated 2 domain protein n=1 T... 204 7e-51 UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 T... 202 2e-50 UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 T... 202 2e-50 UniRef50_C4V4Y4 Flagellar hook-associated protein 2 n=2 Tax=Sele... 202 3e-50 UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=B... 201 4e-50 UniRef50_Q73AL3 Flagellar hook-associated FliD, putative n=33 Ta... 200 6e-50 UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 T... 200 1e-49 UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 T... 199 2e-49 UniRef50_C6QNN0 Flagellar hook-associated 2 domain protein n=1 T... 199 2e-49 UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersin... 198 4e-49 UniRef50_Q9X0K7 Flagellar hook-associated protein 2 n=7 Tax=Ther... 198 4e-49 UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD... 197 1e-48 UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax... 197 1e-48 UniRef50_C5RFT3 Flagellar hook-associated 2 domain protein n=1 T... 196 1e-48 UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactob... 196 2e-48 UniRef50_C9XJ10 Flagellar cap protein n=6 Tax=Clostridium diffic... 196 2e-48 UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=A... 195 2e-48 UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=V... 195 2e-48 UniRef50_B7IQA2 Flagellar hook-associated protein n=10 Tax=Bacil... 195 3e-48 UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Cam... 195 3e-48 UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax... 194 5e-48 UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 T... 194 8e-48 UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerot... 193 1e-47 UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=P... 192 2e-47 UniRef50_B8DS30 Flagellar hook-associated protein 2 domain prote... 192 2e-47 UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=... 191 4e-47 UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterob... 191 5e-47 UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 T... 190 8e-47 UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 T... 189 2e-46 UniRef50_Q18CX9 Flagellar cap protein n=11 Tax=Clostridium diffi... 189 3e-46 UniRef50_C4TU94 Flagellar hook-associated protein n=1 Tax=Yersin... 189 3e-46 UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 T... 188 5e-46 UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=C... 187 6e-46 UniRef50_C4XHC1 Flagellar hook-associated protein 2 n=1 Tax=Desu... 187 1e-45 UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 ... 186 1e-45 UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=... 185 3e-45 UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseu... 185 3e-45 UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax... 184 6e-45 UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 T... 184 8e-45 UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacteri... 183 1e-44 UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=A... 183 1e-44 UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=u... 183 1e-44 UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 T... 182 2e-44 UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Ca... 182 2e-44 UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 T... 182 2e-44 UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (Fli... 182 2e-44 UniRef50_Q2B1U4 Flagellar hook-associated protein n=2 Tax=Bacill... 181 4e-44 UniRef50_A5L6M4 Putative uncharacterized protein n=2 Tax=Vibrion... 181 5e-44 UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 ... 181 6e-44 UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Trep... 179 2e-43 UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 T... 178 4e-43 UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata... 178 5e-43 UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 T... 177 1e-42 UniRef50_A3DHJ1 Flagellar hook-associated 2-like protein n=3 Tax... 176 1e-42 UniRef50_C9LY19 Putative flagellar hook-associated protein 2 n=1... 176 1e-42 UniRef50_A4J775 Flagellar hook-associated 2 domain protein n=1 T... 175 4e-42 UniRef50_B5YGA9 Flagellar hook-associated protein 2 n=1 Tax=Ther... 172 2e-41 UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=V... 172 3e-41 UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain prote... 170 7e-41 UniRef50_C8PMN7 Flagellar hook-associated protein FliD n=1 Tax=T... 170 9e-41 UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 T... 169 2e-40 UniRef50_B9KJE9 Flagellar hook-associated 2 domain protein n=4 T... 169 2e-40 UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herb... 169 2e-40 UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Liste... 169 2e-40 UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing pr... 169 2e-40 UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=... 168 4e-40 UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Ca... 168 4e-40 UniRef50_UPI0001C3576C flagellar capping protein n=1 Tax=Clostri... 168 4e-40 UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax... 168 5e-40 Sequences not found previously or not previously below threshold: >UniRef50_D0Z9J1 Flagellar hook-associated 2 domain protein n=2 Tax=Edwardsiella tarda RepID=D0Z9J1_EDWTE Length = 471 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 206/473 (43%), Positives = 295/473 (62%), Gaps = 7/473 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L LT +K LTP + QQSS+ AKL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKLTGVEKQRLTPYTTQQSSYKAKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+K D F+ T +S FS TT+ +A+ G Y I+VT LAQAQ+LT +T Sbjct: 61 SKDLAKTDAFTITKASS-HDQFSVTTSASAVPGNYAINVTQLAQAQSLTAKTHATSQTDQ 119 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + ++ + LTI G I +S +SL+G+RDAIN + AGV AS+I + + EY Sbjct: 120 LGSAGASGRELTITVGEPPKETKISLSDEQTSLTGLRDAINKSNAGVKASVIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA--SASSNGMEVSVAAQNAQLTVNNVAIE 235 LSVT+ DTG + + ++VSGD L + YD +++NGM +V ++A++T+N + I Sbjct: 180 LSVTAADTGAKSNIKMNVSGDSKLAGMLNYDGHKDSAANGMAQTVEGRDAKMTLNGIDIT 239 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSN I+DA + +TL L VT Q L I+ D+ I DWV++YNSLIDTF+SLTK+ Sbjct: 240 RSSNKITDAPQGVTLELKAVTKDTQNLVISSDSEGVSKKIHDWVDSYNSLIDTFASLTKF 299 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 T V G +++ +NG LLGD+TLR IQ+ +K ++S+ + + K L +GI+TDP GKL Sbjct: 300 TPVKKGE-AENFTNGPLLGDNTLRAIQSGVKGVMSSAQDNPNLKGLGNLGISTDPQTGKL 358 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +D KL A+ + V VG+GK TG+ + S + S++ G+I + T ++ +L Sbjct: 359 NIDDSKLKKAIDEYPGQVQNFFVGNGKDTGMANMVHSEIQSYIKNDGVIDSTTKSINNSL 418 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 L+ ++ + ID + RYK QF QLD +M LN TSSYLTQQF SNSK Sbjct: 419 QHLSDRIDSVNQSIDETINRYKAQFVQLDKMMAKLNGTSSYLTQQFNAMSNSK 471 >UniRef50_Q0AAT0 Flagellar hook-associated 2 domain protein n=2 Tax=Gammaproteobacteria RepID=Q0AAT0_ALHEH Length = 477 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 143/491 (29%), Positives = 228/491 (46%), Gaps = 38/491 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASISSLGVGSGLD+ ++D L AA++ + Q+S A++S G L+ A+T F Sbjct: 1 MASISSLGVGSGLDIRDLVDQLVAAERQPGQNRLDRQESRLEAQISGLGRLQQAITDFGG 60 Query: 60 ANTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT-----T 113 A +S F + TS+ +A S + +A G Y ++VT LAQAQ L T + Sbjct: 61 ALGNVSAESDFRSVVATSNNESAVSVSAGRDAPPGSYDVNVTQLAQAQRLATNSDLFEDV 120 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 D + + TI+ T + +L +R AINN V AS+++ G Sbjct: 121 EDFSAGTTSLGTGSFTIEYQDGSAE-TFQLEEGADTLQDVRAAINNQSENVRASVVDDGE 179 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSG---------------DDALQSFMGYDASASSNGMEV 218 G RL +TS +TG NA++ D + D + + Sbjct: 180 GP-RLVITSRETGDQNAVSAITVDPDDPDSDPLLERLAFDAENLAEPDEDGVRAGDNFSQ 238 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 AAQ+A+L V+ + I N IS ++ +TL L+ V + + + ++ A +A+ D+ Sbjct: 239 LRAAQDAELFVDGLRITRPGNEISGVIDGVTLTLSAVD--SARINVAEEPGSAASAVSDF 296 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--S 336 V AYNSL T L + D +S G L GDSTLR++Q +L+ M+S + Sbjct: 297 VGAYNSLQRTLGELNAF-------DPESGEAGELKGDSTLRSVQARLRQMISEPLPGAGG 349 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 +TLA +GITT DG LE++ +L AL ++ V L ++ G+ + + Sbjct: 350 PVQTLADLGITT-RRDGTLEINDARLDDALSENRLDVIRLFT--DEENGLAARLQGAVDE 406 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + +I + T+ + L L R+D AR QF+ +D ++ +N TS + Sbjct: 407 FTGRDSVINSRTESLQDRLAALAPQQERLDRRMDQLEARLIRQFSAMDSMIAQMNQTSEF 466 Query: 457 LTQQFENNSNS 467 L Q + Sbjct: 467 LDNQLNLLNQQ 477 >UniRef50_P24216 Flagellar hook-associated protein 2 n=63 Tax=Enterobacteriaceae RepID=FLID_ECOLI Length = 468 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 468/468 (100%), Positives = 468/468 (100%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA Sbjct: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA Sbjct: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV Sbjct: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT Sbjct: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA Sbjct: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD Sbjct: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK Sbjct: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK Sbjct: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 >UniRef50_C5BAA4 Flagellar hook-associated protein 2, putative n=4 Tax=Enterobacteriaceae RepID=C5BAA4_EDWI9 Length = 475 Score = 324 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 197/474 (41%), Positives = 284/474 (59%), Gaps = 9/474 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG+GSGLDL+S+L +T ++ LTP NQQ S+ +KL+AYGTLK AL F Sbjct: 1 MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDV 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+K D F+ T S+ F+ TT NAI G Y+IS++ LAQAQ+LT +T D +A Sbjct: 61 SKDLAKLDTFTITKA-STHDQFNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSA 119 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 T + LTI G I ++ +SL G+RDAIN + A V ASII + + EY Sbjct: 120 QGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINKSGANVKASIIQISDKEYT 179 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS--ASSNGMEVSVAAQNAQLTVNNVAIE 235 LS+T+N TG + + L+VSGD L + Y+ + A+ GM+ +V Q+A+LT+N + I Sbjct: 180 LSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPIT 239 Query: 236 NSSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 SSN I+D + +TL L T Q L I+ D I +W ++YNSLIDTF +LT Sbjct: 240 RSSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALT 299 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 K+T V G + +NG LLGDSTLR IQ+ +K LS+ ++ + K + +GI TDP G Sbjct: 300 KFTPVKQGQAP-AFNNGPLLGDSTLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTG 358 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 KL +D KL + + V L +G+GK TGI + + ++ + G++ + T ++ Sbjct: 359 KLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRDYVKSNGVLDSTTRSINN 418 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 +L L+ ++ + IDA ++RYK QF LD LM+ LN TSSYLTQQF + S Sbjct: 419 SLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKS 472 >UniRef50_Q1QVX4 Flagellar hook-associated 2-like protein n=2 Tax=Gammaproteobacteria RepID=Q1QVX4_CHRSD Length = 458 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 176/470 (37%), Positives = 275/470 (58%), Gaps = 18/470 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M +I+SLGVGSGLDLS +LD L A+ A L PIS+Q+ S+ AKLSA+G L++AL + + + Sbjct: 1 MPTITSLGVGSGLDLSGLLDQLKEAESAKLEPISDQKQSYKAKLSAFGRLENALESLRES 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL K + F A S+ A + +T A+ G+Y + V+ LAQ+QTL + +D + A Sbjct: 61 ATALGKPETFQALSSKMQGEAVTVSTDSTAVPGRYQVEVSALAQSQTLASSGFAEDAELA 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE-YRLS 179 +L G + +I + A N++L G+RDAIN+ AG+SASI+N G+G RL Sbjct: 121 ----TGELAFTIGEE--AFSITLDADNNTLEGLRDAINDQDAGISASIVNDGSGTPQRLV 174 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TS +TG N + +S + +F A +++ M +VAAQ+AQL+VN + I ++SN Sbjct: 175 LTSTETGEANQIGISSTDATLQAAFGFDAADPTASDMRQTVAAQDAQLSVNGIEITSASN 234 Query: 240 TISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 + AL+ +T +L + LT+++D + +I D+V+AYNSL DT +SLT + Sbjct: 235 RVEGALQGVTFDLQATHETGTSDALTLSRDDKAIKASINDFVDAYNSLQDTMASLTSF-- 292 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 D++S G LLG+STLR +++QL++ + V Y+ L +GI+ GKLE+ Sbjct: 293 -----DAESGEAGQLLGNSTLRGVESQLRNAM-GNVGDGDYRLLGDLGISLTVE-GKLEV 345 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D D L A++ + V A G G + + L + L G + AT G+ ++ + Sbjct: 346 DDDVLDEAVEGNLRDVSAFFEGSDGSDGFAAKLDAALGTMLDEGGSLDVATSGIDTSIER 405 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + + Y + IDA +ARY+EQF LD ++ +NSTSSYLTQQF + + Sbjct: 406 VDERYTSMQASIDATIARYREQFADLDSMVAQMNSTSSYLTQQFNSLNAQ 455 >UniRef50_C9RAZ6 Flagellar hook-associated 2 domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAZ6_AMMDK Length = 462 Score = 321 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 134/481 (27%), Positives = 228/481 (47%), Gaps = 33/481 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA + +G+ SGLD SI+D L ++ + + +++ + +A+ + L Sbjct: 1 MADMRIVGIFSGLDTQSIIDKLMQLERKPIELLQQKEARLEQQKAAWQKIGQDLNALNAV 60 Query: 61 NTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ A ++A + TSS T+ +A + A G Y I+++ LAQAQ++ + D T Sbjct: 61 LFDLTLASTYAAKAATSSNTSVLTAQASNTAQPGTYNITISQLAQAQSVASGAFSDPTAA 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + T Q G + SL+ IRD IN A AGV+A+++ G YRL Sbjct: 121 LNLSG----TFQINGKSITVVTT-----DSLNSIRDKINAAGAGVTATVVLQQTGSYRLI 171 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TS TG A++ + +G S + AQ+A TVN + + SSN Sbjct: 172 ITSQTTGSAGAISFVDDATTKVLQSLGILTSTGAIA-NQLTPAQDAVFTVNGLQLTRSSN 230 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 T++DA+ +TL L + G+ TLT++ D + IK++V+ YN+L+ + TKY Sbjct: 231 TVTDAISGVTLKLQSL--GSATLTVSTDVQAIKDKIKNFVDKYNALMQDIAEYTKY---- 284 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDPSDGKLEL 357 D + + G L+GD++L +Q+ L+ LS+ VS S Y +L+ IGITT L + Sbjct: 285 ---DPNTKTAGILMGDASLYQLQSSLRRWLSDFVSGLSYPYNSLSGIGITTSGEAPTLSI 341 Query: 358 DADKLTAALKKDASGVGALIVGDGKK------TGITTTIGSNLTSWLSTTGI-----IKA 406 D KL+ AL + V L D G+ + L WL+ TG ++A Sbjct: 342 DDTKLSQALSQAPDQVAKLFNADSGSAYPSQADGVAVRLRKILKLWLTGTGTTGVGFLQA 401 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + S+ + + + +R+ + +QF ++ + LN+ SS+L Q+F + Sbjct: 402 KDNYFSQEIRSIEDQIRSMEERLKVREQVLWQQFNAMEEFLAQLNAQSSWLAQKFAQLNK 461 Query: 467 S 467 Sbjct: 462 Q 462 >UniRef50_Q67K38 Flagellar hook-associated protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K38_SYMTH Length = 476 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 114/482 (23%), Positives = 213/482 (44%), Gaps = 24/482 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+ G+ SG D +++ +L ++ + +Q AK A+ ++SALT Q+ Sbjct: 2 SMRLGGLISGADTETLISALLELERVRIYRQEEKQEQLEAKQKAWRDVRSALTNIQSKLD 61 Query: 63 ALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L LF + S + + T A YT+ V LAQ+ +TT++ Sbjct: 62 QLRFPTLFRSRKVELSDNSVATVTADAGAAQTSYTLQVVKLAQSHVITTQSEAAYKAADE 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T G D + + +LS + IN A +GV A ++ V G++RL +T Sbjct: 122 QLG-WAGTFDIGTDPNALKTITVEETDTLSSLAAKINAADSGVLAHVVMVSEGKFRLVLT 180 Query: 182 SNDTGLDNAMTLSVS------GDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 + +G N + L + + + V AQ+A++ +N + Sbjct: 181 AAKSGSANVIRLENEVPGQPPQGQTYGNLLEDILGLTGANQLVLSEAQDAEIILNGEPYK 240 Query: 236 NSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +S+NT + L I + + + + ++T++ D K +KDWVNA NSL D L+ Sbjct: 241 SSTNTFDNILPGIKITVKKPSGDDVVSMTVSSDIDKIVQVVKDWVNAVNSLQDLLKKLSA 300 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD--- 349 Y D + + AL G+S +R+IQ++++ S V+ +S K L+QIG++T Sbjct: 301 Y-------DVEKKTGAALTGESLVRSIQSRMRQFFSTEVAGMPASMKMLSQIGVSTGAYG 353 Query: 350 -PSDGKLELDADKLTAALKKDASGVGALIV-GDGKKTGITTTIGSNLTSWLST-TGIIKA 406 GK+ +D +KL L++D GV L + + GI + + S L + +G ++ Sbjct: 354 TADFGKIVVDEEKLREVLQRDPEGVARLFGLNEDGQKGIAVQMNDYIKSLLDSQSGALEV 413 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 +S+ ++++ +++ + + QF +++ M L +YL S Sbjct: 414 RDKSLSQQIDRIRDTIERIEVQLEQREKVLRLQFARMEEAMARLQGQGNYLALMLLGRSQ 473 Query: 467 SK 468 S+ Sbjct: 474 SQ 475 >UniRef50_Q56827 Flagellar hook-associated protein 2 n=10 Tax=Enterobacteriaceae RepID=FLID_XENNE Length = 489 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 186/490 (37%), Positives = 255/490 (52%), Gaps = 31/490 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSG+DL S+LD L AA+K L P++ QQ+S+ AKL+ +GTLK +L ++A Sbjct: 1 MASISSLGAGSGMDLGSLLDKLQAAEKKRLEPLAQQQTSYKAKLTGFGTLKGSLEKLKSA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D + T T F+ +T A G Y I V LA+AQ+L + K Sbjct: 61 SEELKKFDKLNTTKTNGDHKTFTPSTDSKASPGNYEIEVQQLAKAQSLQSTEVSGVKKLL 120 Query: 121 I--ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG------ 172 + I Q G+K+P+ I + +SL IRDAIN + V+ASII Sbjct: 121 GEQGKGTRTIIITQPGEKEPMKISLKDDETSLVEIRDAINKKEGNVNASIIKADENGTEE 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG---MEVSVAAQNAQLTV 229 G+ L +TS G + MT+ V GDD L + Y + G M V A NA+LTV Sbjct: 181 EGKSYLILTSKKAGTRSIMTIKVEGDDELGKLLNYTSDGKGGGSGAMTQKVGAANAKLTV 240 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTL------------------TITQDTSKA 271 N + IE +N I DA E I LNL V+ + + +++D Sbjct: 241 NGIPIERQTNEIKDAPEGIILNLKKVSETEEVIVKVNGEDKKIPRPKTEILVVSRDIEPM 300 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 + AIK WV++YN L TF SL K+ V G + S NGALLGD TL+ IQ+QL+ L Sbjct: 301 KEAIKKWVDSYNELQTTFDSLAKFKPVGKGE-AASKDNGALLGDGTLKGIQSQLRHQLFA 359 Query: 332 TVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 + TL ++GI DG LE+ +KL LK+ ++ V A +GDG K G T T Sbjct: 360 AQDVADIATLNKLGIK-QKLDGTLEISDEKLEKNLKEKSADVKAFFMGDGAKPGSTQTYN 418 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + G I AT+G++K L L + + IDA + RYK QFT+LD L+ SLN Sbjct: 419 LLKETLDGHEGTIATATEGINKRLKTLERQVEQTNRNIDATMERYKRQFTELDKLVNSLN 478 Query: 452 STSSYLTQQF 461 +TSS L Q Sbjct: 479 NTSSSLFQLL 488 >UniRef50_A5D0G4 Flagellar capping protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0G4_PELTS Length = 518 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 120/515 (23%), Positives = 217/515 (42%), Gaps = 55/515 (10%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SG+D SI++ L A++ L + + + Y L ++L TF+ Sbjct: 9 SSLRIGGLASGIDTDSIIEELMKAKRIPLQKLEQNKQILLWQQEDYRELNTSLRTFRDKV 68 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ + + + +S+ +A A+ A+ G Y+++V LA ++ ++ D Sbjct: 69 FSMKLQATYMTKKAVSSNESAIGASAGTGAVPGIYSVTVNQLAAGVSVGSQAGLPDEANG 128 Query: 121 IATSDS-----------KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 + S ++ G K T + ++ + AIN A G+SAS Sbjct: 129 SGGTKSLADQFFGGVVKDISFTLEGSKGSKTFTFNTGTDNIYSVVSAINAAGLGISASYD 188 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV---SVAAQNAQ 226 N R +T+ TG + ++ DD L G S ++ A Q+A Sbjct: 189 ATLN---RFFLTTTSTGAAAKIKVTNDTDDFLADAAGAGGSKLKLLLKDDGTVYAGQDAV 245 Query: 227 LTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 + + A + +S+NT++ + ITL L + T+T++ DT AIKD+V+AYN L Sbjct: 246 FSFGDAAGLTSSTNTVT--VNGITLTLKQGGGASSTVTVSNDTDAVFNAIKDFVSAYNDL 303 Query: 286 IDTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSM 328 I + T + + +G L DS L +I +++ Sbjct: 304 IGKINGKLSETRYSDYLPLTDEQRKELTDEQEKKWEEKARSGLLRNDSLLESIVIKMRMT 363 Query: 329 LSNTVS----SSSYKTLAQIGITTD--PSDGKLELDADKLTAALKKDASGVGALIVGDG- 381 +S V Y +LA IGITT GKL +D DKL AL+KD GV L Sbjct: 364 MSAVVPGLSAGEGYNSLAGIGITTGSYSEKGKLYIDEDKLKEALQKDPEGVMNLFTKSSD 423 Query: 382 --KKTGITTTIGSNLTSWL--------STTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 + GI + ++ + + S + + + + ++ ++ + DR+ Sbjct: 424 VYSEKGIAARLYDDVNNGITLISEKAGSDSSYTSVDNSAIGRRIKQIDEEIDRMEDRLAE 483 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 RY QFT L+ ++ +N+ S++L QQF + Sbjct: 484 MEDRYWRQFTALEQAVSRMNAQSAWLFQQFGGGNR 518 >UniRef50_B8GT45 Flagellar hook-associated protein 2 n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT45_THISH Length = 458 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 149/468 (31%), Positives = 257/468 (54%), Gaps = 25/468 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLG+GSGLDLS++++ L AA++ + + +++++ A+LSA+G++K L++ +TA Sbjct: 2 AISSLGIGSGLDLSALVNQLVAAERQPVESRLFRREANYQAQLSAFGSIKGGLSSLETAL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L T+++S + +A G+YT+ V LA A+T + DD T + Sbjct: 62 GKLVDLKE-GRTASSSDNARLGVSAQESAFPGRYTVRVETLATAETRASLAF-DDADTVV 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + L + GD + + I I N++L GIRDAIN ++AGV ASIIN G G RL +T Sbjct: 120 GSGSLSLQV---GDGELVNITIDEDNNTLRGIRDAINASEAGVQASIINDGTGA-RLVLT 175 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S TG N + L+VS DD + + + +SN ++V AA +AQ +N + + + SNT+ Sbjct: 176 SGTTGAANTINLTVSDDDGDDTDLSGLSRLASNNLDVVTAAGDAQAQINGLTVTSPSNTL 235 Query: 242 SDALENITLNLNDVTTGNQTLTIT--QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 A+E +TL L + ++T+ ++ + ++AI ++V AYN+++D LT+Y Sbjct: 236 DGAIEGLTLTLRGESEPGTSITVEVGKNRAAVRSAINEFVTAYNAVVDQVRELTRY---- 291 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKS--MLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 + ++ L+GDSTLR I+++L S + S + S + L +GI +D +GKL L Sbjct: 292 ---NPETQQGAVLVGDSTLRGIRSRLSSGLLASGGEAGSQFTNLVNLGINSD-RNGKLSL 347 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D+ L AL +D G L+ +++ + + + T G++ A TDG+ + Sbjct: 348 DSAALDRALDEDFQGAIGLL------NEVSSGLRDTVKGFTETGGLLDARTDGLLTRIRD 401 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + +R++ AR QF +D L+ L +TS YL+QQ + Sbjct: 402 IDRQREVLDNRMEQFEARLVRQFGAMDALVGQLQNTSQYLSQQLGALN 449 >UniRef50_C4KAR2 Flagellar hook-associated 2 domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4KAR2_THASP Length = 447 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 166/464 (35%), Positives = 264/464 (56%), Gaps = 20/464 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +IS+ GVGSGLD+ SIL+ L A ++ L+ + QQ S+ +KLSA+G L+SA++ Q A T Sbjct: 2 AISAAGVGSGLDVGSILNQLMAVERQPLSRLQEQQKSYQSKLSAFGQLQSAMSKLQDAAT 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K+ FSAT+ ++ T AF+ ++ +A G Y I V+ LA+AQ T T + Sbjct: 62 ALTKSSTFSATTASAGDTKAFTVSSTASAQTGSYNIEVSQLARAQRTATSATTAPDLSGG 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + D L G P T++++A +L +RDAIN A AGVSA I+N G +L ++ Sbjct: 122 GSIDITL-----GTGTPKTVNLAAGG-TLQDLRDAINAADAGVSAQIVNNGT-VNQLVIS 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S +TG +A L G S +D +A + M A++A+L+++ +AI SSNT+ Sbjct: 175 SKETGAASAFKLEGFGG---LSEFSFDPAAPAGDMVSVQQAKDAKLSIDGLAITRSSNTV 231 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 SDA+E +TL L T T+T+ ++ A+ AI D+ AYN L S T Y Sbjct: 232 SDAIEGVTLTLAKPTESETTMTVARNDETAKKAIDDFAKAYNELNSLIRSQTSY------ 285 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDAD 360 ++++ G L GD+ +R+IQ+QL+ + +N +S S L+ GI+ +DG + +D+ Sbjct: 286 -NAETKKAGTLNGDTGVRSIQSQLRGVFANPISGLSGATMLSDAGISI-RTDGSMSVDST 343 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KL +AL + + L G+G G T+ + + L+T G++ + TDG+++T+ Sbjct: 344 KLASALADPSKKIAELFAGNGTVDGFAKTLETRIKDMLATDGLLTSRTDGINRTIKSFDS 403 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 A R++ ARY QFT LD M+S+++TS+YLTQQ N Sbjct: 404 RIEAFELRLEKVQARYSAQFTALDAAMSSMSTTSAYLTQQLANL 447 >UniRef50_D1NZG8 Flagellar hook-associated protein 2 n=2 Tax=Providencia RepID=D1NZG8_9ENTR Length = 478 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 168/480 (35%), Positives = 256/480 (53%), Gaps = 20/480 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA IS+LG+G+ LDL+ +D L A ++ L P++ Q++S+ A++SA+G ++S+L + A Sbjct: 1 MAGISTLGIGANLDLNVQMDQLEAMERRRLDPLTQQKASYDAQISAFGKMQSSLEKLKKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K + S T +F T G AIAG + ++VT LA+AQT+ T+ D+ + Sbjct: 61 AEDLKKYEDISTTKVNGEYKSFDVKTDGKAIAGVHDVTVTQLAKAQTVATKGHSDNKELL 120 Query: 121 IATSDS-KLTIQQGG---DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 ++ +TI Q DKD I I + A ++SL I DAIN GVSAS+I + +Y Sbjct: 121 GNSAKERTITITQPSQKEDKDKIVIKLDAGSTSLIEIADAINKTDKGVSASVIKDKDNQY 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-----------SASSNGMEVSVAAQNA 225 L VTS G D+ ++++V GDD L + ++ ++GME V QNA Sbjct: 181 HLVVTSKKAGTDSRISINVEGDDQLAKVLNVESVIDDKGNVTIKDKDTSGMEQKVPPQNA 240 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYN 283 +L ++ +E+ +N D +TL+L + L I++D A+ IK WV+AYN Sbjct: 241 ELIIDGFELESQTNEAKDLFPGLTLSLKKESEEGKADHLIISEDIEPAKVKIKAWVDAYN 300 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQ 343 + LTKYT G +NG L+GDSTLR IQ+ L++ + + +S L + Sbjct: 301 EFQNLAKELTKYTPNKNGTTPDK-TNGPLIGDSTLRVIQSTLRTHVRSPQNSGELNLLNK 359 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TG 402 +GI DG LE+D KL AALK + S V GDGK+TG T L L T G Sbjct: 360 MGIK-QKLDGTLEIDNKKLDAALKDNPSSVKTFFAGDGKETGFATENFKFLKETLDTKEG 418 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + ATDGV + L K + +I+ + ++ QF LD +M+SLNST++ L + Sbjct: 419 TLHNATDGVQRKKKSLDKRIEQTNKQIENTMDMHRRQFQNLDKMMSSLNSTTNSLGRLLG 478 >UniRef50_P16328 Flagellar hook-associated protein 2 n=42 Tax=Enterobacteriaceae RepID=FLID_SALTY Length = 467 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 240/470 (51%), Positives = 326/470 (69%), Gaps = 6/470 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS L L +L LT +K LTPI+ QQS+ +AKL+AYGTLKSAL FQTA Sbjct: 1 MASISSLGVGSNLPLDQLLTDLTKNEKGRLTPITKQQSANSAKLTAYGTLKSALEKFQTA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 NTAL+KADLF +T +S+T +T A AG Y I+VT LA AQ+L T+TT TK Sbjct: 61 NTALNKADLFKSTVASSTTEDLKVSTTAGAAAGTYKINVTQLAAAQSLATKTTFATTKEQ 120 Query: 121 IA---TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + + I+Q G K+P+ I + ++S+ IRDAIN+A +G++ASI+ V E++ Sbjct: 121 LGDTSVTSRTIKIEQPGRKEPLEIKLDKGDTSMEAIRDAINDADSGIAASIVKVKENEFQ 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +T+N +G DN M ++V GD L + YD++ ++ M+ V A+NA+L VN + IE Sbjct: 181 LVLTAN-SGTDNTMKITVEGDTKLNDLLAYDSTTNTGNMQELVKAENAKLNVNGIDIERQ 239 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 SNT++DA + ITL L T + T+T+T+D +KA+ AIK WV+AYNSL+DTFSSLTKYTA Sbjct: 240 SNTVTDAPQGITLTLTKKVT-DATVTVTKDDTKAKEAIKSWVDAYNSLVDTFSSLTKYTA 298 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 V+ G S NGALLGDS +RTIQT +++ +N+ S+S++KT+A+IGIT D + GKL++ Sbjct: 299 VEPGE-EASDKNGALLGDSVVRTIQTGIRAQFANSGSNSAFKTMAEIGITQDGTSGKLKI 357 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 D DKLT LK + + L+VGDGK+TGITT I + + S+L+ GII A D V+ TL Sbjct: 358 DDDKLTKVLKDNTAAARELLVGDGKETGITTKIATEVKSYLADDGIIDNAQDNVNATLKS 417 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 LTK Y + S+ ID VARYK QFTQLD +M+ LN+TSSYLTQQF + S Sbjct: 418 LTKQYLSVSNSIDETVARYKAQFTQLDTMMSKLNNTSSYLTQQFTAMNKS 467 >UniRef50_D0ICA8 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICA8_VIBHO Length = 458 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 120/470 (25%), Positives = 241/470 (51%), Gaps = 29/470 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+GSG+D++SI++ + A+++ I + +SAYG LK++L T + Sbjct: 2 GVSATGLGSGIDINSIVNKIVEAERSPKQERIVKGLNDVETNISAYGRLKTSLDTMKDLM 61 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + + F+A ST +S+ A SA+ A+ G Y+I V LAQ+ L + DT Sbjct: 62 YDFRRNNTFAARSTVSSNEEAVSASADHQAVTGVYSIDVQQLAQSHKLVSDGLDADTDF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 +LT+ GG TIDI A +S+L + +IN++ G+ AS+IN +G RL Sbjct: 121 ---GAGQLTLSLGG--RTTTIDIDANSSTLLDVVRSINSSANNPGIKASVINDDSGA-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA-IEN 236 + + TG +N ++++V+ + + Y+ ++++N M AA +A++ ++ +A + + Sbjct: 175 ILGGDKTGAENQISVTVNAPVSSPLQALAYNPASATNSMNEMQAALDARILIDGLASVTS 234 Query: 237 SSNTISDALENITLN---LNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +NT SDA+ + ++ L G+ T+ + +D K + +++++V+AYN+ +L+ Sbjct: 235 DTNTFSDAIRGVNIDVAQLTSAPEGSVTIKVEEDRDKVKASLEEFVDAYNAFYQVTKALS 294 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPS 351 KY D ++ G L+GDS +R+ Q++S+ S+ + +S +TL+++GI+T Sbjct: 295 KY-------DPETRQGGPLVGDSVIRSAVNQMRSLFSSPIEGAPNSLRTLSELGIST-TM 346 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 +G+LE++ D L L ++ + G+ G + + ++ G I+ + Sbjct: 347 EGRLEINYDLLDKQLTRNYGALEGFFGGN---QGFARKLEETVQNFTGVDGAIRNRETSL 403 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 +L + + R++ R +QF+ +D M + S + + Sbjct: 404 GDQRIRLQDEQDNLDRRMEDLENRTLKQFSAMDSAMAQMQSQLAAMMSIM 453 >UniRef50_A1WUC9 Flagellar hook-associated 2 domain protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUC9_HALHL Length = 476 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 113/482 (23%), Positives = 221/482 (45%), Gaps = 31/482 (6%) Query: 1 MASI-SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 M ++ S + VGSG+D + ++ L A++A + ++ KL A G ++ + Q Sbjct: 8 MPNMPSQMDVGSGIDTNKMVQDLVRAERAPTEQRLDRREQELQEKLEALGQMRGTIGELQ 67 Query: 59 TANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 A L +S + +S+ + + + A G+Y + V LA+ Q L T + + Sbjct: 68 EAVQGLGDPSAYSGIDAESSNAGVAAVSASEEARPGQYDVEVEQLARTQRLATASGAFED 127 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 A +L I G+ + + I + +L GIRDAIN G+ AS+++ G G R Sbjct: 128 SAD-AVGTGRLVIT-DGEGNEQAVTIDEESGTLLGIRDAINAQAEGLRASVVDDGAGP-R 184 Query: 178 LSVTSNDTGLDNAMT---LSVSGDDALQSFMGYDASASS-------NGMEVSVAAQNAQL 227 L++ + TG NA+ +D + + + + A +A + Sbjct: 185 LAIATEQTGRANAIAQIRAEQDPEDDQGNLSALQYNVADPQSGEPMGAFQEVRPASDAVV 244 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 T++ + I N I A+E TL+L + G ++I Q T A+ I+ V+++N + Sbjct: 245 TIDGMQITRPENRIEGAIEGATLSLKE--EGRSRVSIEQQTGLAEENIQRLVDSFNQVRA 302 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQI 344 + L+ Y D ++ G L GD TLR + +QL ++ V + +L + Sbjct: 303 QLNQLSDY-------DPEAEKAGPLQGDHTLRNLLSQLSRAVNEPVEALDGAPISSLGDL 355 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 G+ T+ DG L+LD +++ + + + V ++ ++G+ + + L + L +I Sbjct: 356 GVRTN-RDGTLDLDGERMQQMVGEHSELVTRMMT--DPESGVMSRLEGVLENALGRDSVI 412 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 TDGV L+++ D R++ + + + +F+++D + LN TS +L Q+ Sbjct: 413 DMRTDGVESRLDRIADDRERLDRRMERREDQLRSEFSRMDSRVAELNQTSEFLEQRLAAM 472 Query: 465 SN 466 ++ Sbjct: 473 NS 474 >UniRef50_B9ZNY5 Flagellar hook-associated 2 domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNY5_9GAMM Length = 452 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 128/465 (27%), Positives = 244/465 (52%), Gaps = 25/465 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +ISSLGVGSGLDL+ ++ L AA++ ++ ++ A++SA+G L S++ + Sbjct: 2 AISSLGVGSGLDLNQLVGQLVAAEREPKEQRLNQREERIDAQISAFGELTSSVDQVGSVL 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LS + + +++ + + + T G+A +++ V LAQ+Q + + D Sbjct: 62 GDLSGFEP-TQSASVADDSVANVTVTGDAENSDFSLEVNQLAQSQIVASAAG-DFDSADD 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 +L IQ G + + +TID+ ++L +R+AIN+++AGV+ASI+N GNG RL ++ Sbjct: 120 EVGAGQLQIQVG-NGNAVTIDVEEG-ATLRDVRNAINDSEAGVTASIVNDGNGA-RLVLS 176 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 +N+TG DN ++++ + D D+S + + AAQ+A+ +N + + +SSNT+ Sbjct: 177 ANETGADNTISVTATEDPEGSGLGRLDSS----NLTETRAAQDAEAVINGLTVTSSSNTL 232 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 SD +E + + L V++G T+++++D + ++ ++ +V YN+LI + LT Y Sbjct: 233 SDTIEGLEIELTGVSSGPTTVSVSEDRDELESLLQSFVENYNALIGQTNQLTAY------ 286 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNT--VSSSSYKTLAQIGITTDPSDGKLELDA 359 D + L GDST+R I+++L + L + S +TLA++GI DG L D+ Sbjct: 287 -DPEEDEAAVLTGDSTVRGIRSRLGNALIQPAEGAGGSNQTLAELGI-ISNRDGTLSFDS 344 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 + + A+++D I + S+ G+I+ DG+ L+++ Sbjct: 345 TRFSEAMERD-----GFENISDTVRNIAGQMRDVTDSFTGRDGLIQVRQDGLQSDLSRIE 399 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + RI+ A + QF+++D ++ + +T L Q N Sbjct: 400 RQREDLEARIERLEANWVRQFSRMDSMVAQMQATGDQLMAQLANT 444 >UniRef50_Q0AHH2 Flagellar hook-associated 2 domain protein n=3 Tax=Nitrosomonas RepID=Q0AHH2_NITEC Length = 480 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 166/482 (34%), Positives = 258/482 (53%), Gaps = 30/482 (6%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +SS G+GSGLD+S I+ L ++ LT ++ +++ A+LSA+G+LKSAL++FQ + A Sbjct: 2 LSSPGIGSGLDISGIISKLMQVEQRPLTQLNTKEAKQQAQLSAFGSLKSALSSFQESVKA 61 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT----- 117 L+K LF+ +T + TT + +T+ AG + I V LAQAQ + + Sbjct: 62 LAKPALFTGFKATLTDTTVATVSTSAKVAAGVHEIEVQSLAQAQKIKSEAFVTTDTIIGN 121 Query: 118 ---KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 A T + T +K TI I A S+LS IR+ IN A GV+ASI+N GNG Sbjct: 122 GTLTIAFGTYNEDDTFTANTEKAAKTITIDPAKSTLSDIRNTINEANTGVTASIVNDGNG 181 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDA------LQSFMGYDASASSN--GMEVSVAAQNAQ 226 RL + S DTGL NA+ ++V D S + +DAS++ M +V A+NA+ Sbjct: 182 N-RLVIASRDTGLTNALKITVDDADGNHTNNTGLSKLAFDASSTGGVTNMAEAVPAKNAK 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSL 285 + ++ +A+E SSNTI+DALE +T NL G TLT+ QD + +TA+K +V AYN L Sbjct: 241 MKIDGIAVEKSSNTINDALEGVTFNLLKANPGTNMTLTVEQDKASVETAVKAFVTAYNEL 300 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQI 344 + +L++Y D+ + L GDST+R +Q ++++ML+ S+ +L+++ Sbjct: 301 EKSIGNLSRY-------DTANKQASVLTGDSTVRMVQNRVRAMLTGNQSAVGGINSLSEL 353 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDG--KKTGITTTIGSNLTSWLSTTG 402 GI+ DG L+LD KL+A L V A G T + L + G Sbjct: 354 GISFQ-KDGTLKLDNGKLSAVLVDPDKNVAAFFSTQTMEGTEGFATQLDQLLDGMARSDG 412 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 +I DG++ T+ + + A R+ R + QFT LD ++ S+ T++YL QQ Sbjct: 413 LINNRMDGINSTIKGIGRQREALEHRLGEVEKRLRAQFTALDSMVASMTQTNNYLQQQLA 472 Query: 463 NN 464 N Sbjct: 473 NL 474 >UniRef50_Q6LTP9 Putative flagellar hook-associated protein 2 n=2 Tax=Photobacterium profundum RepID=Q6LTP9_PHOPR Length = 457 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 30/471 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I + G SGLD++S++ S+ A++ I+ Q+ LSAYG LK +L T + Sbjct: 2 NIGAAGTASGLDINSMVKSIVDAERTPKESRINQQRDQVDVSLSAYGKLKGSLDTMKNLM 61 Query: 62 TALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + D+ SA S + + +A + AI GKYT++V LAQ+ + + + + K Sbjct: 62 ADFRRNDVMSARSVSIDNDEVLAANVSSEAIPGKYTVNVQQLAQSHKIVSSSFDEKEKI- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL++ GG P T+DI A S + + IN A GV AS+I NG RL Sbjct: 121 ---GAGKLSMALGGK--PFTVDIPADESKILDVVRLINRAPDNPGVMASVIKDDNGA-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA-IEN 236 + S+ TG N++ +++ + G++ + +N M A ++++ ++ +A + + Sbjct: 175 VLASDKTGEQNSIKVNIDAPAFSTLQKFGFNINNDANSMREMQPAVDSRVLIDGLASVTS 234 Query: 237 SSNTISDALENITLNLNDVTTGNQT----LTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 S+N+I DA+ + ++L +T G +T + + D ++ +I+ +VNAYN D L Sbjct: 235 STNSIEDAINGVDIDLKKLTDGVETPDVVVNVGYDRNQVGGSIEQFVNAYNQFFDVSQEL 294 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDP 350 ++ D +S G L+GDS +R+I QL+ +N V + S +TL+++GITT Sbjct: 295 GRF-------DPESKEKGPLVGDSIIRSITNQLRGAFANPVEGAPESIQTLSELGITT-T 346 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 G+LE+D D L ++ + VG G + G I + S+ TG IK + Sbjct: 347 MGGRLEVDYDIFDKQLDQNFNDVGEFF---GDQNGFARRIEDLIHSYTGITGSIKGRENS 403 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + +L D R++ R +QF +D M + S + Sbjct: 404 LNDQVMRLNTDQTNLDRRMEGVKQRTHDQFVAMDAAMGQMKGQLSSMMSMM 454 >UniRef50_B2A819 Flagellar hook-associated 2 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A819_NATTJ Length = 487 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 97/501 (19%), Positives = 205/501 (40%), Gaps = 53/501 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG D +++ L ++ + + + + + L L +F ++ Sbjct: 1 MRLGGISSGFDTHGLVERLMEIERQPIQRMEKEIEQLESTKEEWRELNKTLQSFMDELSS 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD----DTKT 119 L DL+ + SS S T + +A Y + V+ +A+A +++ D Sbjct: 61 LQDKDLYFSMEAESSHEDISVTAERDVMARTYDLEVSQIARAHRISSGPIESIQDLDDVD 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-------------VSA 166 + L + G +++P TI+I + + SL+ IRD IN+ + A Sbjct: 121 EPLELEGDLELYLGDEEEPYTIEIESED-SLADIRDKINDGDLKETGDEELDNRELPLEA 179 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMT-LSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 II RL + + TG +++T + S + Q + + AQ+A Sbjct: 180 QIIGD-----RLVIEAEQTGESHSITKIGGSENVWGQDGLNLWNAEEDYFSNEIDKAQDA 234 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTG-----NQTLTITQDTSKAQTAIKDWVN 280 + +N + EN SNTI ++ +T+++ ++ + ++I D +KA+ I ++V Sbjct: 235 KFQINGLDFENESNTIDHIIDGVTIDIGAISADQELPVSSLISIELDDNKAEEEISEFVE 294 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK- 339 +YN + + T D D G L GDS LR + ++ +++ +++ Sbjct: 295 SYNEIFSKLQDKGRITLADDEID-----RGPLQGDSLLRNLTRNFRTRVTDPINAEGLGL 349 Query: 340 -----TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 L+Q GI D G++ D D+ A + S V G + GI + + L Sbjct: 350 KNDRLVLSQFGIEID-RYGEMTFDKDRFKEAQDESVSQVYEAFGG---EHGIGARLQNYL 405 Query: 395 TSWLSTTG---------IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + G I + + +++ + R++++ QF++++ Sbjct: 406 EGLSFSEGAREADMRETAIGNRKLTLDRQIDRNEDRMDQMERRLESREDHLWSQFSRMEQ 465 Query: 446 LMTSLNSTSSYLTQQFENNSN 466 + ++ S ++L Q+ + S+ Sbjct: 466 ALNNVYSEGNWLQHQYMHMSS 486 >UniRef50_D0FQ35 Flagellar hook-associated protein 2 (HAP2) (Filament cap protein) (Flagellar cap protein) n=2 Tax=Erwinia pyrifoliae RepID=D0FQ35_ERWPY Length = 489 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 146/491 (29%), Positives = 245/491 (49%), Gaps = 29/491 (5%) Query: 1 MASISSLGVGSG--LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + G+GSG +D SS+LD + A++ L P +++++T ++SA+G + S+L+ Sbjct: 1 MAGFAIPGLGSGGTIDFSSMLDQIKMAEQQKLVPYDKRKTAYTGQVSAWGKISSSLSALS 60 Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + + + S+ AF AT A Y I V LA+A + T + D T Sbjct: 61 DNISKMGEDGFHG--VNVSTNKAFKATAKAGAQPDSYEIYVEQLARAHKIGTGSQADKTS 118 Query: 119 TAIATSDSKLTIQQG-GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 S T++ GD +P+ I+++ +SL I IN K V+AS+ G + Sbjct: 119 NLGDQSVDTRTLKITVGDGEPMEIELAKDQTSLEQIAKKINQEKGDVTASVRPTEEGGFT 178 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYD----ASASSNGMEVSVAAQNAQLTVNNVA 233 L +TS TG + + + VSGDDAL + +D A SN M AQNA + ++ Sbjct: 179 LVMTSKKTGEEGQIAVEVSGDDALAGVLDFDPNVQPGAGSNAMSTVTEAQNAIMVIDGTR 238 Query: 234 IENSSNTISDALENITLNLNDVTTGN-------QTLTITQDTSKAQTAIKDWVNAYNSLI 286 +E SSNTI+DA+E +TL L V+ + + L+IT DTSK + AI+++V YN+ I Sbjct: 239 LERSSNTINDAVEGVTLELQQVSEKDKDGEYAYENLSITSDTSKFKDAIEEFVKLYNAFI 298 Query: 287 DTFSSLTKYT-AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN--TVSSSSYKTLAQ 343 S + + D + NG L+G+ TLR + ++ + + + S + +LA+ Sbjct: 299 SASDSASAWNAPTDDAEGEANPGNGPLMGNGTLRRLTNDIRFITGSDNSQLSQVFSSLAK 358 Query: 344 IGITT---DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS- 399 +GI D GKL +++ KL A+K + + AL +G G+ GI + + +++ Sbjct: 359 LGIEVKVEDAGTGKLTINSSKLEEAVKNNPDEIEALFLGKGESEGIADKLQEMIKTYIGD 418 Query: 400 ------TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 TTGII T G+ + +++ + IDA V R ++ F +LD+ M +N+ Sbjct: 419 KDSIPKTTGIIGQTTKGLEEQTKQVSARMSQVQKMIDATVERNRKDFERLDLAMNKMNNM 478 Query: 454 SSYLTQQFENN 464 SS L+ Sbjct: 479 SSQLSSMLAGL 489 >UniRef50_D2TYE5 Flagellar hook-associated protein fliD n=1 Tax=Arsenophonus nasoniae RepID=D2TYE5_9ENTR Length = 469 Score = 294 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 151/475 (31%), Positives = 231/475 (48%), Gaps = 22/475 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++++ LG GSG+ + LD L ++ L P+ +Q + ++SAYG+L++ L Q A Sbjct: 1 MSNMTVLGAGSGMPIGEWLDKLENSENQKLNPLKQKQQKYDKQISAYGSLRAELDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K D + TS + + TT A AG Y + V LAQAQ L T T D K Sbjct: 61 AETLMKFDKITTTSVSKEHKTVAVTTDEKAAAGNYEVIVEQLAQAQALKTNTIDDVKKKL 120 Query: 121 IATSDSK----LTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 S I+Q +K P+ I +S +SL IRDAIN VSAS++ + E+ Sbjct: 121 GGNVTSGQERIFVIKQNSEKQPLEIKLSDEQTSLREIRDAINKTDGNVSASLVKIKENEH 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 +L ++S TG + M + V GD L + SN M +VAAQNAQ+ +N + IE Sbjct: 181 QLVLSSKKTGTEAKMAIEVKGDSTLNAIFN------SNNMTETVAAQNAQVKINGINIER 234 Query: 237 SSNTISDALENITLNLNDVTTGNQ---------TLTITQDTSKAQTAIKDWVNAYNSLID 287 +N I DA E +T NL + + T+ IT+D + AIK WV+A+NSL Sbjct: 235 QTNEIKDAPEGVTFNLLKTSEKDTNNNNSPIAETINITKDIEPTKKAIKGWVDAFNSLHS 294 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 + + TKY G S++NG LL DS+ I +Q+K + N L GI Sbjct: 295 FYKNQTKYVPTKPGEAP-SANNGILLNDSSSAMIFSQVKDLTLNVQDMPDMNHLNHFGIG 353 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKA 406 + GK+ +D KL ALK + V +GDG+K+G T L L G + Sbjct: 354 FNHE-GKITIDDKKLDEALKDSPAKVKQFFMGDGEKSGFATETFHYLKKTLDKLEGPLHF 412 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 T+ +++ L + I A + RY+++F +D ++++ +S+ L Sbjct: 413 TTESLNQQKKMLHLKMESVQTTIAATLKRYQKKFIAMDQAISNMKQSSNSLMALL 467 >UniRef50_Q1LBH5 Flagellar hook-associated 2-like protein n=2 Tax=Cupriavidus RepID=Q1LBH5_RALME Length = 487 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 176/496 (35%), Positives = 265/496 (53%), Gaps = 41/496 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA++ LG+GS + L ++LD L A++ L + Q +++ AKLS YGT+KS L+ FQ + Sbjct: 1 MAALDFLGIGSNMQLGTLLDQLATAERLPLKALETQNTAYQAKLSGYGTIKSMLSAFQAS 60 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 +L+K D F A + S++ + T NAIAG Y ++V LAQAQ+L Sbjct: 61 ANSLAKLDTFGAVKAQVSNSDVMTVATGVNAIAGNYNVNVKSLAQAQSLAGAGQL-KQDA 119 Query: 120 AIATSDSKLTIQQGG----------------------DKDPITIDISAANSSLSGIRDAI 157 I T G T+ I ++N +L GIRDAI Sbjct: 120 IIGTGTLTFEFGVTGGYDADPASPTYGTYVNPTFTPTADSAKTVTIDSSNQTLQGIRDAI 179 Query: 158 NNAKAGVSASIINVGNGE-YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS--N 214 N A GV ASIIN G+G YRL + S TG +M ++ S + LQ+ GYD A Sbjct: 180 NKANMGVKASIINDGSGTPYRLVLNSEKTGEAMSMRITGSSPE-LQALAGYDPVAGPQPG 238 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 GM+ V A NAQLT+N++AI ++SN ++DA + +T+ L TG ++T+TQD + A Sbjct: 239 GMKEVVRATNAQLTINDIAITSASNVVTDAAQGVTMTLKK--TGTTSMTLTQDLDSIKAA 296 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 ++ AYN+L LT + D +S + AL GD LR IQ+ L+S+L+ + Sbjct: 297 VQGLATAYNNLQSATKQLTAF-------DVKSGTKAALTGDGVLRGIQSTLRSVLNTPEA 349 Query: 335 S---SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG 391 + TLAQ+G+T DG + +D KL AAL + + V AL GDG K GI + Sbjct: 350 GMRDGAATTLAQLGVTLQ-KDGTMSVDTKKLDAALAGNLADVTALFGGDGTKGGIARRLS 408 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + + T G + +AT G+ +++ L K Y++ S+ IDA + R ++QF LD+ ++ +N Sbjct: 409 EAVDTMTGTNGPLTSATKGIEQSVKDLGKRYDSMSEHIDANIKRVQKQFQALDLAVSQMN 468 Query: 452 STSSYLTQQFENNSNS 467 T YLTQQF +N+ Sbjct: 469 RTKDYLTQQFSAMNNT 484 >UniRef50_C4UKG1 Flagellar hook-associated protein 2 n=3 Tax=Yersinia RepID=C4UKG1_YERRU Length = 469 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 219/472 (46%), Positives = 301/472 (63%), Gaps = 13/472 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLG GSGL LS +LD+L++A++ L P++ QQ+S+ KL+A+G L+SAL +TA Sbjct: 1 MASISSLGAGSGLQLSELLDNLSSAEQKKLVPLTQQQTSYKGKLTAFGVLQSALAKVETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL KA+ + TS +SS TAFSATT A AG Y+I+V LAQ+Q+L + + T Sbjct: 61 AAALKKANTINGTSVSSSNTAFSATTDSAASAGSYSITVEQLAQSQSLLSAKMPNATDKL 120 Query: 121 IATSDS-KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++S LTI Q G K P+ + ++ +SL+ IRDAIN + V+ASI+ + Y LS Sbjct: 121 GNDNESRTLTITQPGQKKPMEVVLTKDQTSLTDIRDAINKKEGNVTASIMKGDDNSYYLS 180 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDA------SASSNGMEVSVAAQNAQLTVNNVA 233 +TS TG ++ MT+SV+GDD L + Y + S M +V A +A+LTVN ++ Sbjct: 181 LTSKTTGTESEMTVSVTGDDDLSKVLSYTPEPAGGSGSGSGAMTQTVKAADAKLTVNGIS 240 Query: 234 IENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 I SN I+DA E +TL L T +TL + D+ + AI+ +V+AYNSL TF+S Sbjct: 241 ITRQSNVITDAPEGVTLTLKSKTKAGEPETLNVVHDSKPTKDAIQAFVDAYNSLQTTFTS 300 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 LTKYTAV+AGAD QS+SNGAL+GD TLR IQTQLKS L+++ + KTLA +GI T Sbjct: 301 LTKYTAVEAGAD-QSTSNGALVGDGTLRNIQTQLKSQLASSQAG-DIKTLASLGI-TQEI 357 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDG 410 GKL++D+DKL ALK + V GDG+ TG T + L L T+ G +K ATDG Sbjct: 358 SGKLKVDSDKLDKALKDKPNAVTQFFAGDGENTGFATKMDKLLNDALDTSKGTLKNATDG 417 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++K+L L K + + I+A + RYK QF QLD L+TS NST S LT QF+ Sbjct: 418 INKSLKNLDKQVVSTTANINATIERYKIQFAQLDKLVTSFNSTGSMLTAQFK 469 >UniRef50_Q6MQ71 Flagellar hook associated protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQ71_BDEBA Length = 455 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 101/469 (21%), Positives = 189/469 (40%), Gaps = 28/469 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA G+ SGL + I++ L A++ + + ++ KL L++ + Sbjct: 1 MAGFRITGMASGLPPN-IVEQLMEAERIPVKQMEVGRAKQEDKLKLVQDLETKVNDITKN 59 Query: 61 NTALSKADLFSATSTTSSTTAFSA--TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L+ F S G+AI G Y I V LAQ + D + Sbjct: 60 LGELTSTSGFVDKKFLSGDPNIVDGQVDPGSAIPGDYAIEVVQLAQKPAAMSNGFPDKDQ 119 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII---NVGNGE 175 T I K +G + I+ +NS+L G+ IN A G+ A ++ Sbjct: 120 TQIGVGYIKFETPEGTK----EVYINGSNSTLDGVMKQINAANVGLKAQVVEDRKDQENP 175 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++L V+ TG D+ +T + E S AQNA++ V+ IE Sbjct: 176 FKLLVSGLSTGNDSQVTF---------PKIYLLDGDQDMYFEESRKAQNAKVKVDGFEIE 226 Query: 236 NSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 N +D + +TL+ G L++ ++ IK +V++YN+ ++ K Sbjct: 227 LPDNKSTDLVPGVTLDFKSAAPGREIRLSVKENLEVISGKIKSFVDSYNAALEFIQKQNK 286 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSD 352 A + ++ + G L GD LR+I+ L+ ++ N S + + ++GI + + Sbjct: 287 LQAG----NGKNPALGPLGGDGMLRSIENSLRRVILNPQMGVESPIRRVGELGIEFN-RN 341 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGV 411 G L DK L+ + V A + GDG TG +T+ + + ++ G I G+ Sbjct: 342 GTLNFSQDKFNKVLQANPKAVAAFLRGDGFNTGFVSTVKREIGNLVNGQFGTISNRKRGL 401 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + ++ +++ + + +F L+ M++LN+ + Sbjct: 402 EDRIKQVNNRIETKERQLERKEDSLRRKFADLEQKMSALNAQQAKFAAM 450 >UniRef50_Q46QZ5 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN n=2 Tax=Cupriavidus RepID=Q46QZ5_RALEJ Length = 471 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 196/479 (40%), Positives = 276/479 (57%), Gaps = 23/479 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS LDL+S+LD L A++A L I + +SF AKLSA+G ++S LT +Q A Sbjct: 1 MAAISALGVGSNLDLTSLLDQLKTAEQAPLDAIDKRATSFQAKLSAFGQVQSVLTAYQAA 60 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L A F A +T ST S TTA NA+ G Y+I+V LA AQ+L + D K Sbjct: 61 AKKLGDATTFGAVKATVGSTDIMSVTTASNAVPGNYSITVKTLATAQSLVSGQIADQ-KA 119 Query: 120 AIATSDSKLTIQQGG--------DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 AIA + ++ G A N+SL IRDAIN A GV+ASIIN Sbjct: 120 AIAGTSGEIVFDFGEALAADPTATPTSTKKVTIANNASLQDIRDAINKAGVGVTASIIND 179 Query: 172 GNGE-YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 G+ YRL +TS+ TG M +S SG AL + +G+D SA++N ME V NA L VN Sbjct: 180 GSSTPYRLVLTSDKTGTQATMRVS-SGSAALNNIVGFDPSATTNAMEQKVPPANATLKVN 238 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + I + SN + DA + +T+NL G +LT+T+D +++I+ +V AYN++ T Sbjct: 239 GIDIVSQSNAVVDAGQGLTMNLTK--EGTTSLTVTRDYDSIKSSIQAFVTAYNNIQTTAK 296 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITT 348 SLT + D+ S+ L GD TLR+IQ +L+SML T+ + + LA IGI Sbjct: 297 SLTAF-------DTSKQSSSPLTGDGTLRSIQMRLRSMLGGTMPDGNGGSISLADIGIKF 349 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 D G + +D KLT AL + +GV A+ GI + + +T G +K A Sbjct: 350 DGKTGTMSVDDTKLTKALNNNLAGVTAMFSSTTGTGGIGKQVSGYVDGLSATNGSLKTAQ 409 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 DG++KTL L K+Y+ + DRI+ + RYK QFTQLD++++ +N TSSYLTQQF +N+ Sbjct: 410 DGITKTLKDLEKNYSDSQDRINTTMDRYKAQFTQLDLMVSQMNRTSSYLTQQFTALNNA 468 >UniRef50_C6D975 Flagellar hook-associated 2 domain protein n=6 Tax=Enterobacteriaceae RepID=C6D975_PECCP Length = 474 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 202/486 (41%), Positives = 276/486 (56%), Gaps = 34/486 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L S+L L A+ L PI+ QQSSF A+LS LKSAL +TA Sbjct: 1 MASISSLGVGSGLPLDSLLTQLKTAENQKLVPITTQQSSFKAQLSGISALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+ ++ F ++T +S+ AFS TT A+AG Y+I V LAQA ++T+ Sbjct: 61 NDALAISESFGIVKGSIDGITSTKVSSTNKAFSTTTDSKAVAGTYSIDVKQLAQAHSITS 120 Query: 111 RT--------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + DTK I+ + K T + IDI A +SL+ +RDAIN Sbjct: 121 TAKTSATEPLSTTDTKLVISQDNGKFTKVGDDYLKYLEIDIKAGETSLNDVRDAINKVNG 180 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 V+AS++ + EY L +T+ ++G ++ +++ G D S + VAA Sbjct: 181 TVTASVVKAKDNEYYLMLTAKNSGTESKISI-----------GGDDTSVFNGTPTEKVAA 229 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVN 280 +NAQ+T N + IE SN ISDA E +T+NL T +TLTI QD + + IK WV+ Sbjct: 230 KNAQITANGIEIERQSNAISDAFEGVTINLLAQTETGKPETLTIEQDITGMKDTIKAWVD 289 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YK 339 AYN+L DT S+ TKYTAV+AG SQ SSNGALLGDST+R IQ++LK+ L+ S ++ Sbjct: 290 AYNALQDTISAQTKYTAVEAGE-SQVSSNGALLGDSTVRGIQSKLKAQLTTVQSGGDEFR 348 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 LA +GIT + GKLE+ KL ALK++ V VGD KTG T + L L Sbjct: 349 ILADLGITQNFKTGKLEISDTKLEKALKEEPGRVRDFFVGDNDKTGFATQTRTYLKEVLD 408 Query: 400 TT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T+ G+IK DG++ +L KL D I++ +A Y++QF LD MT +NST S LT Sbjct: 409 TSEGLIKTKEDGINSSLKKLDTQAARVQDAIESTIAIYQKQFVDLDKAMTDMNSTMSRLT 468 Query: 459 QQFENN 464 F Sbjct: 469 SMFSKL 474 >UniRef50_C5D7S5 Flagellar hook-associated 2 domain protein n=7 Tax=Bacillaceae RepID=C5D7S5_GEOSW Length = 528 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 109/528 (20%), Positives = 188/528 (35%), Gaps = 72/528 (13%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS + G+ SG+D+ I+ L ++ L + ++ + Y + L T Sbjct: 1 MASNMRIGGLASGMDIDQIVKDLMKVERMPLDKLKQKKQILEWQRDDYREMNKLLQELDT 60 Query: 60 ANTA--LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDD 116 ++ T T+S + +A I ++T LA A T+ T Sbjct: 61 LIFDGIYRQSTFMKKTVTSSDESVVTAVATSVTANQNVEIGNITQLASAARWTSTTQITT 120 Query: 117 T-----------KTAIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGI 153 T + + + I I N SL+ I Sbjct: 121 DNGNIDPNAKLNSVTFTTGNGSFQFSDPITLTLNVKKPGSTTAETVEISIDPQNDSLNSI 180 Query: 154 RDAIN-NAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 +N NAK GVSA ++ +T N+TG ++ + GD D+ Sbjct: 181 IIKLNQNAKLGVSAFY---DEFTKKMVITKNETGSGASIEVVSGGDLLQALGFAIDSVTD 237 Query: 213 SNGMEVSV-------AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTI 264 N + + +NA T+N + E ++NT + +T L +V TG T++ Sbjct: 238 PNTNTTTNVLRQDPDSGKNAIFTINGLQTERTTNTF--MINGMTYTLKNVKPTGTVTIST 295 Query: 265 TQDTSKAQTAIKDWVNAYNSLIDTFS-----------------SLTKYTAVDAGADSQSS 307 DT +IK +V+ YN +I + T + + Sbjct: 296 ATDTDSIFNSIKAFVDKYNEVIGKINAELKEERYRNYPPLTDEQKEAMTEKQIELWEEKA 355 Query: 308 SNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDP---SDGKLELDADKL 362 +G L GDS L + ++++ L +V S + LA+IGITT GKL +D KL Sbjct: 356 RSGMLRGDSILSSGLSKMRMDLYTSVQGVASGFSQLAEIGITTSSNYLDGGKLIIDETKL 415 Query: 363 TAALKKDASGVGALIVGDGKK-------TGITTTIGSNLTSWLSTTGII--KAATDGVSK 413 ++++ + + L D + TI + G + + Sbjct: 416 RQKIQENPNAIYRLFNNDSTNYSEKGIVRRLRDTIKDTIRKVEQKAGKTLWTNQQFAIGR 475 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 L ++ + DR+ RY QFT ++ + N S YL F Sbjct: 476 DLIQIDNQIDRFEDRLKQIEDRYWRQFTAMEKAIQRANEQSMYLMNAF 523 >UniRef50_Q1R090 Flagellar hook-associated 2-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R090_CHRSD Length = 441 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 158/464 (34%), Positives = 251/464 (54%), Gaps = 24/464 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI+SLGVGSGLDL+ +LD L A++ L PI QQ+ AK+SAYG L+ AL+ Q++ Sbjct: 1 MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L+ +LF++ ++ + SA +A G+Y + VT LA A ++ T+ ++ Sbjct: 61 ASNLNDPELFNSVTSDVEGDSVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLN 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 S G IT+ A+S+LS +RDAIN + +GVSASI+ G+ + RL++ Sbjct: 121 AGAEASLDVTLNDGTAQNITV---EADSTLSDVRDAINASDSGVSASIVFDGS-QSRLAI 176 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 S TG + + S + + Q+A+L VN +AI + SN Sbjct: 177 ASESTGAEAGI----------NSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQ 226 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + +A++ TL+L++ TG T+T+ +D + AI +V++YNS+ T LT + Sbjct: 227 VEEAIQGTTLSLSE--TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSF----- 279 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 D++S G LLGD T R +TQL+S L+++V TL+ IGI+ + DG+LE+D + Sbjct: 280 --DAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSDIGISMNV-DGELEVDDE 336 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 KL + + AL G G GI L + L G+++ A G + + +L + Sbjct: 337 KLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDE 396 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 Y++ D I + V RY+ QF +LD ++ +N TSSYLTQQ Sbjct: 397 RYSSMQDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQLSAL 440 >UniRef50_A7FJ24 Flagellar hook-associated protein 2 n=30 Tax=Enterobacteriaceae RepID=A7FJ24_YERP3 Length = 466 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 227/469 (48%), Positives = 316/469 (67%), Gaps = 9/469 (1%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASIS+LG GSG+DL+++L L+AA++ LTP++ QQ+S+ KL+AYG L+SAL +TA Sbjct: 1 MASISALGTGSGMDLNTLLSQLSAAEQTRLTPLTTQQTSYKGKLTAYGVLQSALAKLETA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +TAL KAD ++T+ + S +AFSATT A AG Y+I VT+LA+AQ+L + T Sbjct: 61 STALKKADTLNSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKL 120 Query: 121 IAT-SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++ + +TI Q G K+P+ I +++ +SL+GIRDAIN + V+ASI+ + Y L+ Sbjct: 121 GSSDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVNASIMKADDNTYYLA 180 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG--MEVSVAAQNAQLTVNNVAIENS 237 +TS DTG + MT+SV+GD+ L +F+ Y S++ + V A++A L+VN V+I Sbjct: 181 LTSKDTGTQSEMTISVAGDETLNNFLNYTPSSTGGSGALTQKVKAEDATLSVNGVSITRQ 240 Query: 238 SNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SNTI+DA + +T+NL VT + LTI +D + + AI+ +V+AYNSL TF SLTKY Sbjct: 241 SNTITDAPQGVTINLKAVTKEGAPEQLTIVRDNTATKAAIQSFVDAYNSLQTTFGSLTKY 300 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 T V+ G D QS+SNGAL+GD TLR+IQTQLKS L+++ S KTLA IGIT D DGKL Sbjct: 301 TVVETGQD-QSTSNGALVGDGTLRSIQTQLKSQLASSQSG-DLKTLASIGITQDL-DGKL 357 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-GIIKAATDGVSKT 414 +DADKL AL + V A VGDG+ TG T L + L TT G +K ATDG++ + Sbjct: 358 VIDADKLNTALTDKPNSVTAFFVGDGETTGFATQTEKLLNTALDTTLGTLKTATDGINTS 417 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 L L K A + I+ + RYK QFTQLD LMTS+NST+S+LTQQFE+ Sbjct: 418 LKNLDKQIAATTASIETAIERYKTQFTQLDKLMTSMNSTASFLTQQFES 466 >UniRef50_C9XV84 Flagellar hook-associated protein 2 n=4 Tax=Enterobacteriaceae RepID=C9XV84_CROTZ Length = 487 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 212/478 (44%), Positives = 311/478 (65%), Gaps = 14/478 (2%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS+LGVGS L L+ + D L AA++ LT I+ QQS++ +LSAY L+S+L + QTA Sbjct: 12 MATISNLGVGSNLGLADLYDKLEAAEQTKLTVITKQQSAYNTQLSAYSKLQSSLQSLQTA 71 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L K +++TS +S+ TAF+ATT +A+ G YT++V +A+AQ LT+ + T Sbjct: 72 TATLGKTATWNSTSVSSTNTAFAATTTSDAMTGDYTVNVKQMAKAQVLTSGSIASSTTQL 131 Query: 121 IATSDSKLT--IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 AT+ + T I Q G P+T+ ++ ++SL+GI AIN A VSAS+I +G++RL Sbjct: 132 GATTGTTRTVTISQPGTSKPLTVSLADGDTSLNGIAKAINKAGGNVSASVIKASDGDFRL 191 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +TS TG N MT++V+GDD LQ +G+D+S + + + A+QNA++ VN++ IE S+ Sbjct: 192 MLTSKTTGTTNDMTVTVTGDDTLQGIIGFDSSTKTGALSIQTASQNAKVVVNDIEIERST 251 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N ISDAL TL L +T N+TL++T+ T + A+ DWV AYNSL T +S+TKY V Sbjct: 252 NVISDALPGTTLTLKAQSTANETLSVTRATDANKKAVTDWVTAYNSLQSTIASVTKYVKV 311 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT------TDPSD 352 D G D+QSSSNGAL+GDS +R+IQ+QL+S L+ V S S LAQ+G+T D + Sbjct: 312 DKG-DTQSSSNGALIGDSNVRSIQSQLRSTLTQ-VQSGSVAILAQLGVTQDPVLAADGAA 369 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS----NLTSWLSTTGIIKAAT 408 G L++D KLT AL ++ V A VGDGK TG+ T + + L++ G+I+ A Sbjct: 370 GVLKIDDAKLTKALNENPDAVQAYFVGDGKTTGLATQMNNTLTSMLSTTTGKEGVIQNAK 429 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 D ++ TL L K Y + I+A +ARYK QF+ LD L++ LNSTS+YLT+QF ++S+ Sbjct: 430 DSINDTLKSLDKRYTSMEASIEATMARYKAQFSNLDSLVSKLNSTSTYLTKQFSSSSS 487 >UniRef50_O33421 A-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID1_PSEAE Length = 478 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 147/479 (30%), Positives = 238/479 (49%), Gaps = 28/479 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S + G SGLD+ +I+ +L AA+KA + +S TAK + G LKSA++ QT Sbjct: 4 STTINGYNSGLDIKNIVSTLVAAEKAPKEAQLKRLESDTTAKFTGIGQLKSAISDLQTIL 63 Query: 62 TALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+K +LF S + S +AT +A+ G Y + VT LA + T + D KT Sbjct: 64 KELNKPELFQKRSASTSDEKFATATATKDALPGIYKLEVTQLASVSKVATASFADGYKT- 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINV-GNGEYR 177 TS LTI+QG D +T+++ AA ++L+ +RD++N G++A+I+N G+G R Sbjct: 123 --TSGGTLTIKQGADDAGVTVNV-AAGATLAEVRDSLNAQLKDKGITANIVNNPGDGTSR 179 Query: 178 LSVTSNDTGLDNAMTLSVSGD----------DALQSFMGYDASASSNGMEVSVAAQNAQL 227 L T D+G + + S + + SS+ A+NA+ Sbjct: 180 LVFTGKDSGAGKDVFVQGSSGLENFNIGSVGADGKLTLSQLDGTSSSSSGYITQAKNAKF 239 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSL 285 +++ + +E+ +NT+ + +T L VT T+++ QD + IK +V AYN L Sbjct: 240 SIDGLTLESPTNTVDKVINGVTFELKTVTDTNKPITISVEQDRGGVKDNIKKFVEAYNKL 299 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 + S LT T V D ++ GAL+GDS++R + T +++ + + + LA +G Sbjct: 300 VGVTSELTGVTKVG---DDKAPVVGALVGDSSVRNLLTTMRNEMVQPGQGTDVRMLADMG 356 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 ITT DG LE+D KL LK V AL GD TG+ + LT + T G+++ Sbjct: 357 ITT-KKDGTLEIDDKKLDKVLKDKFESVSALFTGD---TGLMKRLDDKLTPYTQTGGVLQ 412 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 DG+ T+ + A + R++ R +QFT +D L+ LN TS + Q + Sbjct: 413 QRLDGLQDTIKSVDTQREALNRRVEQLQDRLLKQFTAMDQLIGQLNQTSGRMAQALSSL 471 >UniRef50_A4XW72 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XW72_PSEMY Length = 487 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 142/490 (28%), Positives = 237/490 (48%), Gaps = 42/490 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G+GSG+D+ SI+ L +++A T + + + A++SA GTL AL TF+TA Sbjct: 2 VGITGIGSGVDIDSIVKVLVDSERAPKTAQLDRLEKTTVARISALGTLTGALNTFKTAID 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 +L+KA LF A + +SS T T A A AG Y++ V LA + + ++ Sbjct: 62 SLNKASLFEARTASSSNTNVLKVTAATTAPAGNYSVQVQQLASSSKVGLQSVSGGGAATF 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYRLS 179 + ++ ++I+ N++L+G+RDAIN A +GVSASII +G RL Sbjct: 122 NSGVMSIS----AGSTSFDVEITEGNNTLAGMRDAINEAGRSSGVSASIITDDSGS-RLV 176 Query: 180 VTSNDTGLDNAMTLSVSGD------------------DALQSFMGYDASASSNGMEVSVA 221 +TS TG N + +SV+ D D + S+++ V Sbjct: 177 LTSTKTGAGNDIQVSVTEDGVTSGSNALTSQAFTPAVDPDNANAFLPPSSTTGAAGVISK 236 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-------NQTLTITQDTSKAQTA 274 AQ+A+LT++ + + +N I DALE +TL+L + LT+ D + ++ Sbjct: 237 AQSAKLTIDGLQLVRDTNKIDDALEGVTLDLVAAQSSADRLEGKTINLTVGVDKAGVKSN 296 Query: 275 IKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 ++ +V+AYN+LI + S LT D + G LLGDS++R + + L++ + Sbjct: 297 LQKFVSAYNALITSTSQLTAVVP----VDGSNPVTGPLLGDSSVRNVLSALRNEMVKMTG 352 Query: 335 SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 + LA +GITT DGKL L+ LTA L + V + G G+ + + Sbjct: 353 EGGVRALADLGITT-EKDGKLTLNDSALTATLDNNFDQVAGYLTGG---DGLMERLAKAV 408 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 + ++ST G++K TD ++ T + + A R++ R Q+ +D L+ L TS Sbjct: 409 SGYVSTDGVLKQRTDALNGTKKNIDEQRKALDLRVEKIQTRLYAQYNAMDSLVGQLKRTS 468 Query: 455 SYLTQQFENN 464 L+ N Sbjct: 469 ESLSGMLANL 478 >UniRef50_A1K917 Flagellar hook-associated protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K917_AZOSB Length = 473 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 170/478 (35%), Positives = 264/478 (55%), Gaps = 25/478 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S G S LD+ S++ L + + L+ ++ +++S+ AKLSA+G +KSALT+ QTA Sbjct: 1 MAAITSSG--SILDIDSLVKGLMSVESRPLSLLATKEASYQAKLSAFGQIKSALTSLQTA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 TAL+ D F+AT T + F+AT+ A AG Y+I VT +A+ Q ++T T+ A Sbjct: 59 TTALNSTDKFAATKATVAGDGFTATSDAKAAAGSYSIDVTQMAKIQRVSTATSSTFVPAA 118 Query: 121 I-------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVG 172 + T D P T + +L +RDAIN + G+ ASI+N G Sbjct: 119 GKMTIEYGTVKTTDGTKSFASDSPPRTATLDFEGGTLEQLRDAINKDTTLGLKASIVNNG 178 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +L ++ TG + A L+ A SF +A+ + M AAQ+A L V+ + Sbjct: 179 T-TSQLVLSGTKTGANMAFKLTGESGLADLSFDPSATAAAGDKMYSVQAAQDALLKVDGI 237 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQT-----LTITQDTSKAQTAIKDWVNAYNSLID 287 ++ SSNTISD ++ +TL LN +G T +T+ D S A+TA+ +V AYN + Sbjct: 238 SVTRSSNTISDVIDGVTLTLNKEPSGTATSLSGTVTVAADQSAAKTAVDAFVKAYNEVQS 297 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGI 346 T SLT Y ++++ + L GD+T R+IQ QL+S L+ + S + +L+QIGI Sbjct: 298 TLKSLTAY-------NTETDTAATLTGDATARSIQGQLRSALAQSFSGLGNASSLSQIGI 350 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 T DG L +D+ K A+ A VGAL G K G L+S + + G+I + Sbjct: 351 TF-AKDGTLSVDSTKFNKAMSDPAMNVGALFAGTDKIDGFADVFSKKLSSMIDSGGVIAS 409 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 TDG++ T+ +TK Y+A R++A ARY+ QF+ LD L++ ++ TS+YL+QQ N Sbjct: 410 RTDGINSTIKSITKQYDAMETRLEAMEARYRSQFSSLDTLLSGMSQTSTYLSQQLANL 467 >UniRef50_Q6D6F5 Flagellar hook-associated protein 2 n=1 Tax=Pectobacterium atrosepticum RepID=Q6D6F5_ERWCT Length = 472 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 199/486 (40%), Positives = 276/486 (56%), Gaps = 36/486 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGSGL L+ +L L A+ L P+++QQSSF A+L+ LKSAL +TA Sbjct: 1 MASISSLGVGSGLGLADLLAQLRTAENQRLVPLASQQSSFKAQLTGVSALKSALDKLKTA 60 Query: 61 NTALSKADLF----------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 N AL+K++ F ++T +S+ AF+ TT A+AG +TI V +LAQA ++T+ Sbjct: 61 NDALAKSESFGIVKGSIDGITSTKVSSTNKAFTTTTDSKAVAGSFTIEVNNLAQAHSITS 120 Query: 111 RT--------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + DTK I+ + K T + IDI A +SL+ +RDAIN Sbjct: 121 AAKTSATEPLSATDTKFVISQDNGKFTKVGDDYLKSLEIDIKAGETSLNDVRDAINKVNG 180 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 V+AS++ + EY L +T+ ++G D+ +++S + + VAA Sbjct: 181 TVTASVVKAKDNEYYLMLTAKNSGTDSKISVSDNDGILGTTV-------------EKVAA 227 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVN 280 QNA + N +AIE SNTISDA E +TL L T +TLTI QD + + IK WV+ Sbjct: 228 QNASIVANGIAIERQSNTISDAFEGVTLTLQAKTEASKPETLTIDQDITGMKDTIKAWVD 287 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYK 339 AYNSL DT +S TKYTAV+AG + Q++SNGALLGDST+R IQ QLK+ L+ + S ++ Sbjct: 288 AYNSLQDTINSQTKYTAVEAGEN-QANSNGALLGDSTVRGIQNQLKAQLTTIQTESDDFR 346 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 A +GIT + GKLE+ KL ALK++ V A VGD K G T + L L Sbjct: 347 IFADLGITQNSKTGKLEISDTKLDKALKEEPGKVQAFFVGDNDKQGFATQTRTYLKEVLD 406 Query: 400 TT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T GIIK DG++ TL KL + I+ +ARY++QF +LD MT +N T S LT Sbjct: 407 TNEGIIKNKEDGINSTLRKLDTQSTRMKNGIEDTIARYQKQFVELDKAMTKMNGTLSSLT 466 Query: 459 QQFENN 464 F Sbjct: 467 SMFSKL 472 >UniRef50_C4SBN1 Flagellar capping protein n=2 Tax=Yersinia RepID=C4SBN1_YERMO Length = 490 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 154/493 (31%), Positives = 257/493 (52%), Gaps = 32/493 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS+SSLG+GSG+D +++L+ + A ++ L P + Q+S+ K+SA+G + S+L+ Q + Sbjct: 1 MASLSSLGIGSGIDTATMLEQIKAGEQTRLKPYTIMQNSYKLKVSAWGGISSSLSALQGS 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ T T SS AF+AT A A ++++++ LA A + T + Sbjct: 61 VKKLTSDAF--NTLTVSSNKAFTATATSEANADTHSVTISQLATAHKIKTDGVDSADEML 118 Query: 121 I-ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + ++ GD +++ +SL+ I A+N + VSAS+ +G Y+L Sbjct: 119 GESNGGTRTITITTGDGKTTEVELKDDETSLNQIAKAVNKQDSNVSASVQRTDDG-YQLV 177 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN-------GMEVSVAAQNAQLTVNNV 232 TS +TG D M++SV GDD L + Y + N GM+ A +A L V+ Sbjct: 178 FTSKNTGSDGEMSVSVEGDDTLGGKLNYKEDDAGNKEGDPDKGMQQVTKALDATLIVDGS 237 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQT--------LTITQDTSKAQTAIKDWVNAYNS 284 SSN ISD + +TL L V+ + T +T+T+DTS ++++KD+V+ YN+ Sbjct: 238 KYTRSSNNISDIIPGVTLVLKQVSESDTTTGEKIPEQMTLTRDTSAIKSSVKDFVDKYNA 297 Query: 285 LIDTFSSLTKYTA------VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSS 336 L+ S +KY D+ +Q++ NGAL+GDSTLR + +S ++ S+ Sbjct: 298 LLKLTSEASKYVPNKTAGLSDSDVATQNAQNGALMGDSTLRGMVGDFRSAVNGVYGDPSA 357 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 Y +LA IG+ DP+ G++ L+ KL A+ + G+ + +G G+K G+ T++ + +T Sbjct: 358 DYGSLADIGVKIDPATGQMTLNESKLDEAIADNPDGIADMFIGRGEKEGLATSLSATITE 417 Query: 397 WLST-----TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 +L GIIK +T+G+ + + ID QV RY+ QF LD M+ LN Sbjct: 418 YLGDPDTKMNGIIKDSTEGLDAQIKLMDTQIEKTQKLIDNQVERYRVQFQNLDTTMSKLN 477 Query: 452 STSSYLTQQFENN 464 S S+ L+ Sbjct: 478 SMSNQLSSILATL 490 >UniRef50_UPI0001C31230 flagellar hook-associated 2 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31230 Length = 475 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 124/498 (24%), Positives = 198/498 (39%), Gaps = 55/498 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ SGL+ I++ + A +K + N+Q K ++ L Q A Sbjct: 1 MAGINFSGIASGLNTGEIIEQMMAIEKRPRILLDNKQVLIETKQGLLRDFQTKLRALQLA 60 Query: 61 NTALSKADLFSATST--TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 T L L++ T + +S T SA++ A G Y I V+ LA A T TR Sbjct: 61 ATDLRSVSLWTQTQSVESSDATKVSASSTSGAGVGGYQIEVSQLANAAQRTYTFTRPAAD 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGEYR 177 TI G I A + + AIN + A V A+ + G Sbjct: 121 G---------TITVDGHSTAI-----RAGMTAQEVATAINTDRDAKVYAAATDDGT---- 162 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L ++S TG A + V+ D A G + ++A T++ V++ +S Sbjct: 163 LVLSSRATGDTGAGFIDVTSDGG-----AIAAKLDRGGARIERQGRDALYTLDGVSLRSS 217 Query: 238 SNTISDALENITLNLNDVTT--GNQTLTITQ---DTSKAQTAIKDWVNAYNSLIDTFSSL 292 SN I D L +TL L VTT G T+++ + + ++ +V AYN+ ID Sbjct: 218 SNVIRDGLAGVTLTLRGVTTASGPVTISVGAPGANVEAIRRKLEAFVEAYNATIDLIRGK 277 Query: 293 TKYTAVDAGADSQ-------------SSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 + V Q G L GD L + + L+ + + VS + Sbjct: 278 LEERTVPDPRSQQDIKNGVADPRTTAQKKAGTLFGDRQLAGMLSDLRQGIYSPVSGLPTG 337 Query: 338 YKTLAQIGITT---------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 +L+ IGI+T D G+L +D D+LT AL +D +GV L+ G G Sbjct: 338 MDSLSSIGISTGAFSASTSRDTLAGRLTIDTDRLTKALTEDPTGVRNLLQGVNNTDGWAR 397 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 L + G++ DG L L + R+ + QFT L+V ++ Sbjct: 398 RFEGLLNDRTKSDGMLDNRIDGADDELRMLRRQMEQMDVRLALREKNLNAQFTALEVAIS 457 Query: 449 SLNSTSSYLTQQFENNSN 466 + +L+ Q +N Sbjct: 458 RARTQGDWLSGQLAGLNN 475 >UniRef50_D0YZ92 Flagellar hook-associated protein FliD n=3 Tax=Photobacterium RepID=D0YZ92_LISDA Length = 462 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 131/472 (27%), Positives = 232/472 (49%), Gaps = 27/472 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SGLD++ + L AA++A I QQ +LS YG +KSA++ + Sbjct: 2 GLSAGGLASGLDITGMTQQLVAAERAPKEQRIKEQQQKVGVQLSGYGQIKSAVSGLEDMV 61 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ +F+ S SS ++ + A G Y I V LA++ + + D A Sbjct: 62 KKFTEDKVFAGQSAESSESSFVDVKASAEAKNGTYNIEVLALAKSHKIVSNNAFDSDPKA 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 L I G +TID + + SL + AINNA GV+A++IN G ++ Sbjct: 122 -ELGSGTLDITVDGKTMSLTIDKNKS--SLKEVVSAINNASDNPGVTATVINDEKGA-KI 177 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG--MEVSVAAQNAQLTVNNVAIEN 236 +S+ TG+ N +++ S D + +D S + M A +AQ+ ++N + + Sbjct: 178 VFSSSQTGVKNQISIDASKMDGELKKLSFDPSNITANPEMIQMQAGVDAQIRIDNHTVVS 237 Query: 237 -SSNTISDALENITLNLNDVTTG----NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 SN D +E +TL++ +T + + IT +TS A+ AIK++++AYN IDT S Sbjct: 238 NDSNKFEDVIEGLTLDIKKLTNTEDVKSAKIDITNNTSGAKKAIKEFIDAYNGFIDTSES 297 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTDP 350 L+KY ++++ S+G L GDS R+I +Q+++++++ V ++ L+ G+TTD Sbjct: 298 LSKY-------NTETKSSGPLNGDSLTRSIISQMRNLMNSGVEVNNQSYYLSDFGVTTD- 349 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATD 409 GK+E+D +KL ALK + A K G + S+ S T G I Sbjct: 350 RYGKIEIDDEKLDDALKDNFKAFNAFF--HTKDDGFLDKSEAIFKSFTSSTDGSITQKEK 407 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + + +L D + ++R+ A R +QF+ +D + +N+ + + Sbjct: 408 SLKEQQQRLNDDMSDLNERMKAYEERTYKQFSAMDAAIGKMNNELNTMMSLM 459 >UniRef50_Q3ADF2 Flagellar hook-associated protein 2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADF2_CARHZ Length = 476 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 139/488 (28%), Positives = 243/488 (49%), Gaps = 45/488 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 I G+ SGLD + I++ L ++ L + ++++ A A+ +K+ L+T + + Sbjct: 3 IQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQS 62 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L A L+++ T+T+S TT +A+ A+ G YTI V +A + + + T T + Sbjct: 63 LQSASLYTSLTATSSDTTILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITAT-LN 121 Query: 123 TSDSKLTIQQGG------DKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 + + I GG + I I I + + SL IRD INNAKAGV+ASI++ Sbjct: 122 LNPTSFKIAIGGVVQKDSQGNDIVISIDSTD-SLVSIRDKINNAKAGVTASIVDN----- 175 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL +T+N TG N+++ + DALQ+ DA+ N + V + +A+L +N + + Sbjct: 176 RLLLTANVTGSANSISFTAVSGDALQALGIADAN--GNAVNVVQSGVDAKLIINGLTVIR 233 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SSNTISDA+ +TLN+ + G ++T+ DT+ IK +VN YN L++ ++ T Y Sbjct: 234 SSNTISDAIYGVTLNVKKI--GTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAY- 290 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-----------SSYKTLAQIG 345 D + + G L GD+T + I QL+ ++ + VS + +L IG Sbjct: 291 ------DPNTKTKGVLQGDATAQQIMFQLRQIVGSAVSGLTDTATYNGKTVTLNSLMAIG 344 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW-------- 397 I+T + L LD +KLT +K++A VG + + GI + + S Sbjct: 345 ISTSGKEATLSLDENKLTELIKQNAQAVGKIFT-NTANNGIIDNLKPYVESLAVYATANG 403 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + T I+ ++ L L + + +D + + +FTQL+ +M+ L + S++L Sbjct: 404 VHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWL 463 Query: 458 TQQFENNS 465 Q + + Sbjct: 464 AAQVSSLT 471 >UniRef50_Q39YI7 Flagellar hook-associated protein 2-like n=3 Tax=Geobacter RepID=Q39YI7_GEOMG Length = 487 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 126/484 (26%), Positives = 223/484 (46%), Gaps = 32/484 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G+ +GLD SSI+ L ++ + +Q + ++S + +++AL +FQ Sbjct: 16 MANISISGLVTGLDSSSIISQLMQLERTPERIMKAKQQKYQNQISEFQKIETALKSFQKV 75 Query: 61 NTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + F + TT + + +A+ + A G +T+ VT LA+ Q + T Sbjct: 76 VKGFNTLGNFKSMQTTVADNSVLTASGSSTATPGTHTVQVTTLAKNQRQVSMGVASQTDK 135 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN-GEYRL 178 T +T G T+ I+ +SL I AIN + A V+ASIIN G+ YRL Sbjct: 136 VFNTGSFTITDSAG---KTTTVSIAEGQNSLGDIVSAINTSGANVTASIINDGSPTPYRL 192 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 VT DT + + S + A A L V+ + + +S Sbjct: 193 VVTGKDT-NNYTLDFSGLTTPPAGGTGSLLPTMLGPSDPSYQAGTAATLVVDGITMTKTS 251 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 NT++DA++ ITLNL T+ + DTS I +++++YN +I+ + + Y Sbjct: 252 NTVTDAIQGITLNLLK-EGSTTTVNVANDTSAVTNKINEFISSYNDVINLVNKQSIY--- 307 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDGKLE 356 + + + G L GDST+RTIQ++L+S+LS TVS Y +LA +GIT+D DG L Sbjct: 308 ----NPDTKTAGVLSGDSTVRTIQSKLQSLLSTTVSGVTGPYTSLASLGITSDKKDGTLS 363 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGIT----------------TTIGSNLTSWLST 400 +D+ L++AL + V L + + + + + +ST Sbjct: 364 VDSTALSSALSTNFEAVADLFTHNTGTYTTLPSNQYGIAQQFNLAIDSMVSPYIGTGVST 423 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 G+I+ G++ +++ + ++ RI+ + + QFT ++ ++ L + + L Sbjct: 424 NGLIETRIKGLNTSISDINDQIDSLESRIEKMQSNLQLQFTNMETTVSKLQTQGNSLLSY 483 Query: 461 FENN 464 Sbjct: 484 LSKL 487 >UniRef50_Q8ENI2 Flagellar hook-associated protein 2 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI2_OCEIH Length = 493 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 103/498 (20%), Positives = 194/498 (38%), Gaps = 48/498 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D SI+ L A++ L + ++ + A+ + L+ Sbjct: 1 MRIGGLASGIDTESIIKDLMQAERIPLNKLEQDKTKLEWQRDAFRDVNKLLSELDNMMLD 60 Query: 64 LSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT--- 119 + + +++ +S+ + A AT A G Y+I+V+ LA + + + Sbjct: 61 MKLSSTYNSKLISSTQSDAVKATANAGASNGTYSINVSQLATSAINVSEGEVEFDPNKTL 120 Query: 120 ---AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGE 175 I T + G++ T I + +L + +N + ++ + S N Sbjct: 121 HEQGITEDVEFTTFDKDGNEQTHTYKIEEGD-TLKDLMKKVNDDKESPIRMSYDENAN-- 177 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L + + TG N SG + + AS + ME NA+ T NN A E Sbjct: 178 -KLIMETTRTGQYNE-----SGSEIEFNESSQFASKFNLLMENETGGDNAKFTYNN-AYE 230 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS----- 290 S +L +T D T GN TLT+ D + I +V+ YN +++T + Sbjct: 231 TESRDNQYSLNGVTFQFYDTTDGNATLTVNNDVDGSVENIMKFVDKYNEIVETINGSQQE 290 Query: 291 ------------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SS 337 + T + + + +G L G+S+L ++ +TV+ + Sbjct: 291 EKYRDFPPLTEEQKKEMTEREIELWEEKAKSGLLKGESSLSNGLFNMRESWYSTVNGDGA 350 Query: 338 YKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGD--GKKTGITTTIGS 392 +K+L +IGITT GKL +D L A+ D V L G G+ + + Sbjct: 351 FKSLTEIGITTSTNYMDGGKLVVDESALREAITDDPESVQKLFSNSSEGDDRGLINRLEN 410 Query: 393 NLTSWLSTTGIIKAA-------TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + S + + + K + + R++ ARY QF++++ Sbjct: 411 AVESTMGQISQRAGNVTDTSLDSYTLGKRMKDIDSRITNFERRLEQTEARYWRQFSEMER 470 Query: 446 LMTSLNSTSSYLTQQFEN 463 ++ +N SS L F + Sbjct: 471 AISMMNQQSSMLMSNFGS 488 >UniRef50_C8W1D6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1D6_DESAS Length = 504 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 107/515 (20%), Positives = 215/515 (41%), Gaps = 65/515 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S+ G+ SG+D+ S++ L A++ L ++ ++ + + Y T+ S L + + A Sbjct: 3 SSLRISGLASGMDIDSMVKQLMKAERMRLDTLTQKKQTLEWQQEDYRTVNSLLRSLRDAT 62 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F + TS+ + TT +A+ G Y +SV+ LA+ LT Sbjct: 63 FNMKLQGTFLSRQATSNNESVVKVTTGTSAVDGTYEVSVSQLAKGAYLTGDKINSGNTAN 122 Query: 121 IAT------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN------AKAGVSASI 168 + + K + G + TI + + ++ + IN+ GV AS Sbjct: 123 LKSQLNLTEGGEKTLVINGPNGTKKTITVDTDTAKMADLVAEINSGLDDSGNTWGVRASY 182 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 V + RL + + DTG D + + ++G + QNA Sbjct: 183 DAVND---RLFLMTKDTGADQTIAVEEGELAQALKL--------TSGNFAYSSGQNANYK 231 Query: 229 VNNVAIENSSNTISDALENITLNLNDVT-------TGNQTLTITQDTSKAQTAIKDWVNA 281 +N V +E ++NT++ + +TL++ V+ T+T++++T AIK++V+ Sbjct: 232 LNGVDLEAATNTVT--INGLTLDIKGVSAKDSGGDPTPTTVTVSRNTDAVYNAIKEFVDK 289 Query: 282 YNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 YN I+ + + + + +G L DS L + ++ Sbjct: 290 YNETIEKVNKEYYEDRYTDYRPLTDTMRESLSDDQEEKWEEKARSGMLRFDSLLGSSLSK 349 Query: 325 LKSMLSNTVSSSS----YKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIV 378 +S L++ V + S Y L +IGITT +GKL + KL A++KD GV L Sbjct: 350 FRSTLNSAVDNVSSTENYNNLTKIGITTGSYQDNGKLIISEKKLKEAIQKDPDGVMDLFT 409 Query: 379 GDGKK---TGITTTIGSNLTSWLSTTGIIKAATDGV------SKTLNKLTKDYNAASDRI 429 G G+ + ++T+ + + ++D + K + ++ D + Sbjct: 410 KSGDTYKEKGLAGRLYDDITNAMDSVIAKAGSSDSLVDDSVVGKQIKDVSNRITTMEDHL 469 Query: 430 DAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + RY ++F+ ++ ++ L+ S+++TQ Sbjct: 470 EDIEDRYYKKFSVMEEALSKLSQQSAWITQMLGGK 504 >UniRef50_C5CXS2 Flagellar hook-associated 2 domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXS2_VARPS Length = 482 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 195/491 (39%), Positives = 286/491 (58%), Gaps = 35/491 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISSLGVGS LDLS++L L A+ L + +Q S+T+KLSAYGTL+S+L T Q A Sbjct: 1 MASISSLGVGSNLDLSTLLSQLQTAESQPLVALQQRQVSYTSKLSAYGTLQSSLGTLQAA 60 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS LF + +S+T +A AG A AG Y I VT LAQ Q+L T Sbjct: 61 AKKLSDPALFQGVKAVSSATDVLTAAAAGTAAAGTYAIDVTQLAQPQSLVAAGQASTTAA 120 Query: 120 AIATS---------DSKLT----------IQQGGDKDPITIDISAANSSLSGIRDAINNA 160 + + L + + + I I ++N++L+GIRDAIN A Sbjct: 121 IGSGTITIDFGAITGGTLDAATGTYSGSGFTKDATRTAVPISIDSSNNTLAGIRDAINAA 180 Query: 161 KAGVSASIINVGNGE-YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 KAGVSASI+N G+G RL +TS+ TG ++M +SV+GD ALQ+ + D A + + + Sbjct: 181 KAGVSASIVNDGSGTPNRLVLTSSQTGEASSMRVSVAGDAALQNLLNNDP-AGTQNLRQT 239 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 VA QNA+L+VN +A+ ++SNT+ +A++ TL L TG+ +L+ DT+ +TAI D+V Sbjct: 240 VAGQNAKLSVNGIAVTSASNTVKEAIQGTTLTLLK--TGSSSLSTQADTAAVETAINDFV 297 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--S 337 AYNSL T ++LT Y + S + AL+GDSTLR +QT+++ L+ + Sbjct: 298 KAYNSLQATANTLTAY-------NQDSKTGAALVGDSTLRNLQTRIRQALTTPQAGGPDD 350 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV-GDGKKTGITTTIGSNLTS 396 K L++IG+ DG + +D+ KL +AL + +GV L G G + + + Sbjct: 351 MKVLSEIGVAFQ-KDGTMAVDSTKLKSALASNLAGVSGLFASATGSTAGYGKQLSALVDD 409 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 ST G +K A+DG++ +L +L + Y R+DA+V RY+ QFTQLD+LM+ +N TSSY Sbjct: 410 LTSTGGALKVASDGMAASLKQLDEQYADMKTRVDAKVERYRTQFTQLDLLMSQMNRTSSY 469 Query: 457 LTQQFENNSNS 467 LTQQF + +S Sbjct: 470 LTQQFASMQSS 480 >UniRef50_A8FXV4 Flagellar hook-associated 2 domain protein n=16 Tax=Shewanella RepID=A8FXV4_SHESH Length = 457 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 125/469 (26%), Positives = 232/469 (49%), Gaps = 28/469 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTAN 61 ++++ G+GSGLD+++I+ L A+K + ++ + + AK+SA GTLKSAL+TFQ A Sbjct: 2 ALTATGIGSGLDINTIVGVLVDAEKIPKEAMFDKTEKTIDAKVSAIGTLKSALSTFQDAL 61 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + + ++ ++ +AT + +G Y + V LAQ + D + Sbjct: 62 EKLQDGGSLNQRTVSTGESSYLTATADKTSQSGSYNVKVEQLAQQHKVAGINVADPS--- 118 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + + L + G+ +T+ A SL I IN+A GV+A+II G RL Sbjct: 119 LPVGEGSLDLTVNGENFSVTV---GATDSLEDIAKNINSATDNVGVTATIITSDAGS-RL 174 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 ++S+ G D+ +++ + G + + A+N+ + V+ + + + Sbjct: 175 VLSSDTEGTDSQISVVANDTVGT----GLNDMFGGANLTELQVAKNSIVHVDGQQLTSQT 230 Query: 239 NTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 N + A+ +TL+L D + + D + ++ +V+AYNSLIDT L+ Y Sbjct: 231 NEVKGAITGVTLSLTDADLNETTVVKVELDKDAVKDNVQGFVDAYNSLIDTVDKLSSY-- 288 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTDPSDGKLE 356 D+ AL GDS +R+I++QL+SM+S+ V L IGI D GKL Sbjct: 289 -----DADKKEAAALQGDSMIRSIESQLRSMISSRVDVGGETVALYDIGIEAD-RYGKLS 342 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTL 415 +D+DKL A++++ +G+ L K TG+ + + + S++ TTG+I + + + Sbjct: 343 VDSDKLDTAIEENMTGIEGLF--STKDTGLANRLDTLVESYVKPTTGLIDSRNNAYTSDK 400 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 +L A + +++ AR +QF +D+++ +LN S+ + + Sbjct: 401 QRLDDQREAFTLKMEQLEARLMKQFNAMDLIVGNLNQQSAGIVGGLNSL 449 >UniRef50_D2LUB9 Flagellar hook-associated 2 domain protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUB9_BACS4 Length = 547 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 94/546 (17%), Positives = 192/546 (35%), Gaps = 87/546 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D ++ L A++ L + ++++ + AY + +T + + A Sbjct: 1 MRIGGLASGMDTQQMITDLMKAERMPLDKLIQRRTTLEWQRDAYRDINLQITNLRDSFRA 60 Query: 64 --LSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L F S SS + AT NA ++V LA A T ++ T Sbjct: 61 TGLGLQATFLQKSVNSSNQSVVRATATANAPNTSVQMNVQRLATASTYVSQNTLSAEVQD 120 Query: 121 IATSDSK---LTIQQGGDKDPITIDISAANSS------------LSGIRDAINNAKAGVS 165 + D LT + G +T+ + S LS + +N++ G + Sbjct: 121 LELKDWNVPGLTFENGVANFEMTVKDPSTGESRVASFQLKETDKLSNVLTTLNSSSLGFN 180 Query: 166 ASII-NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY----------------- 207 A + N ++ + +TG ++ + G++ + + Sbjct: 181 AYMDQNAAADSPQIVLNMRNTGANSDINFDQVGEEGDSTKLNNGLALFQSLGFTTVSPTE 240 Query: 208 -DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN---QTLT 263 ++++ +E NA+ T+N E ++N + + + +L V++ +T Sbjct: 241 EGETSTTLSLEGGRPGTNARFTLNGHTTERTTNQFT--INGVNYSLTGVSSSPDEITMIT 298 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFS-----------------SLTKYTAVDAGADSQS 306 +T K I +V YN L+D + + T + + Sbjct: 299 TQTNTDKIFEDIMKFVEQYNELVDKINGSVNEPRHRDFPPLTDEQRREMTEYEVEMWEEK 358 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVS--SSSYKTLAQIGITTDP---SDGKLELD--- 358 + +G L GDS L + +Q++S + + V + L+QIG+ + P GK+ LD Sbjct: 359 AKSGLLRGDSALNSALSQMRSAMFSVVGVQGDLIRDLSQIGLVSSPNYMDGGKIVLDHTA 418 Query: 359 -----------ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 D+L ++ + +GDG + + + I + Sbjct: 419 REMPNGERMTGEDRLRYYIENHGEELYGFFMGDGPEASDKGILRKLRPALEGAMDRITSR 478 Query: 408 ---------TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + + L + R+ RY QFT ++ M +NS + + Sbjct: 479 AGREGRTNHQFTLGRELINVEDRITNFERRLQQTEQRYWNQFTAMETAMAQMNSQAEQMW 538 Query: 459 QQFENN 464 Sbjct: 539 AMVSGM 544 >UniRef50_C8QVP3 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVP3_9DELT Length = 465 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 120/476 (25%), Positives = 223/476 (46%), Gaps = 33/476 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 SIS+LGVGSGL+L SIL+ L +K L P+ + A+L A+ +++ L ++ Sbjct: 4 GSISTLGVGSGLELQSILEDLRGIDEKQRLDPLKKNIDRYEAQLEAFTVVQNKLLDMRSH 63 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAI-AGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + ++ +SS + + TA + ++ V LA TL + D T Sbjct: 64 VRDLGLETTYLTSAASSSNESVATATAAAGVAEQSLSMEVERLASRSTLLSEGVADR-GT 122 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGN--GE 175 I+ S + + G D D +T+++ ++L G+ INN A AGVSA II+ G+ Sbjct: 123 VISDDASVFSYRVG-DGDLVTVEV-PEGTTLEGLVQLINNDPANAGVSARIIDNGDMDNP 180 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++L + +N+TG +N + + D + + + AA NA ++ ++ Sbjct: 181 FQLILRANETGSNNFIQIEELPDAS--------PAMDTRLEGEEPAALNASFILDGISYR 232 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 NT+++ ++ +T L TG TL+++QDTS + + D V AYN ++ + +++ Sbjct: 233 RQGNTVANVIDGLTFELQQ--TGLTTLSVSQDTSNVRELVVDLVAAYNEVVQEIAGKSRF 290 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPSD 352 D ++ G L +T+ ++ +L+++++ T + + + +G+ D Sbjct: 291 -------DEETGKPGVLAR-TTVSGLRHELQNLMTATYQGDESGAIRNMFDLGLEFQ-RD 341 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKT--GITTTIGSNLTSWLSTTGIIKAATDG 410 G + L+ + L AL + V ++GD K+ G + L S S G I + Sbjct: 342 GSIVLNEEMLDEALAANPQAVRDFMLGDFKREAPGFADRLQDRLGSIASYGGQISTERNS 401 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L + +R+D + A QF +LD M+ + S YLT QF++ S Sbjct: 402 AEDRIRDLETRIESERERLDRRYAVLTRQFIELDSYMSRMTQMSDYLTSQFDSLSQ 457 >UniRef50_A8W111 Type II secretion system protein E n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W111_9BACI Length = 513 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 109/515 (21%), Positives = 199/515 (38%), Gaps = 60/515 (11%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G +G+D++ ++ L A++ + + + ++ + T+ L TF+T Sbjct: 1 MRISGFATGMDINQMVTDLMRAERMPVDRMQQNKQLLEWRMEEFRTINRKLETFRTNIFD 60 Query: 64 --LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDDTKTA 120 A++ + T T+S + S T A NA G I SV+ LA+++ L + +TA Sbjct: 61 GVFRSANMLAKTGTSSDESRVSVTAASNAQPGTMRINSVSSLAESEALVSEALTVSGETA 120 Query: 121 I-----------ATSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKAGVSASI 168 + + L + + A+ + + IN++ G++A Sbjct: 121 TRQTTLADLTGSSDPEFTLEVTTRTSSGEKNETFTFASTDKVDDVLKKINSSDLGLNAFF 180 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS-----NGMEVSVAAQ 223 ++S + +TGL + G A D++ +S G VA Sbjct: 181 ---DTQTGQISFSREETGLYDENGSLAMGGSADAQIAFADSTLASAFGVQEGQGTRVAGS 237 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDV-TTGNQTLTITQDTSKAQTAIKDWVNAY 282 NA + +N + E +NT ++ +T+ L D ++ T+ DT K I D+VN Y Sbjct: 238 NAVVNINGIDTERGTNTFTE--NGLTITLRDTFSSDPVTIGSATDTDKIFDTIMDFVNEY 295 Query: 283 NSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQL 325 N L++ + + + + + +G L D LR Q Sbjct: 296 NELVEHVNEKLREDRNRDFRPLTDDQREALSEREIERWEEQAMSGMLRNDRILRGGFDQF 355 Query: 326 KSMLSNTVS---SSSYKTLAQIGITTD---PSDGKLELDADKLTAALKKDASGVGALIVG 379 +S + VS SS+ LAQIGITT GKLE++ D+L A + +D V L Sbjct: 356 RSAMYTPVSLGEGSSFNQLAQIGITTTNNFRDGGKLEVNEDRLRAKINEDPDAVFRLFTA 415 Query: 380 DGKKTGIT-------TTIGSNLTSWLSTTGIIKAA----TDGVSKTLNKLTKDYNAASDR 428 DG + S + S G + + + ++++ R Sbjct: 416 DGSSQSEKGLARRIRESANSLIDSIAREAGGSRGRNLNHQFTLGRGMDQIDDRITNFERR 475 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++ RY QFT ++ + NS + L Q Sbjct: 476 LEQVEQRYWSQFTAMEKAVAQSNSQAESLFAQMYG 510 >UniRef50_B1Y379 Flagellar hook-associated 2 domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y379_LEPCP Length = 479 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 147/488 (30%), Positives = 264/488 (54%), Gaps = 32/488 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASISS G+GSGLD+SSI+ L A +K+ L + + S +KLSAYG ++S ++ + A Sbjct: 1 MASISSAGIGSGLDVSSIVTQLMAVEKSPLQQMQTEASKIQSKLSAYGKVQSYVSALRDA 60 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+K+D + +T+ +S + F+ATTA A AG Y+++V +A AQT+ + T Sbjct: 61 ALNLTKSDTWGSTTASSGDASVFTATTASGATAGNYSLTVQQMASAQTVASAAWPASVST 120 Query: 120 AIAT---------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 + + + + + ++A++ +L+ +RD IN AK+GV ASI+N Sbjct: 121 VGSGVLRLELGTWAAGQTGFTPKSGTSSVDVTVAASD-TLADVRDKINAAKSGVMASIVN 179 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNGMEVSVAAQN 224 +G RL + S++TG +NA ++ + DD S + +D SA +N M S AA N Sbjct: 180 DTSGS-RLVLRSSETGAENAFRVTATDDDGNNTDASGLSALAFDPSAGANAMVQSQAAVN 238 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 A+ T+N +++ ++SN ++D ++ +T+ L V++ L+++ +T +TA+ + +AYN+ Sbjct: 239 ARATINGLSVSSASNLLTDVVDGVTIKLGKVSSTPVDLSVSSNTESVKTAVTAFADAYNN 298 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQ 343 L + TKY ++ + S L GDS +++ +++++ T + ++ LAQ Sbjct: 299 LSKYLAEQTKY-------NAAAKSGATLQGDSGTNALRSAMRNIIGGTSGVTGAFNRLAQ 351 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALI----VGDGKKTGITTTIGSNLTSWLS 399 +G+ DG L++D+ KLT++L K + + AL G+ G ++ S LS Sbjct: 352 VGLDPQS-DGTLKVDSTKLTSSLGK-LADLKALFANKDAGNEANNGFAVSLQKWGDSLLS 409 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 G + + + + ++ K ++R+ AR + Q+T LD M LN S+Y+TQ Sbjct: 410 FDGSLSTRSSSLQRQIDANAKKQEDFNERMTGVEARIRAQYTALDTQMAKLNGLSTYMTQ 469 Query: 460 QFENNSNS 467 Q N + S Sbjct: 470 QITNMNKS 477 >UniRef50_Q9K6W0 Flagellar hook-associated protein 2 n=1 Tax=Bacillus halodurans RepID=FLID_BACHD Length = 532 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 105/534 (19%), Positives = 195/534 (36%), Gaps = 80/534 (14%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D S++ L ++ L + ++ + + AY + L A Sbjct: 1 MRIGGIASGIDTESMIKQLMQVERIPLNKFTQRKITLEWQRDAYREVNLLLKKLDDAAAN 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 + + ++++ AF+A G Y + V +A + + T I+T Sbjct: 61 IRLRSSLNTKEASTTSKAFTAQPNAQVRNGSYQLKVNQIATQSRNISSEAISNGSTKIST 120 Query: 124 S-------------------DSKLTIQQ---GGDKDPITIDISAANSSLSGIRDAINNAK 161 + TI G + I + SL + IN+A Sbjct: 121 TRALNEQNVYADGLNIEDYHGQTFTITTYNSSGAAVEKSFTIDTS-KSLDSLFKDINSAG 179 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GV S + + ++ + +TG NA S G+ V+ Sbjct: 180 LGVRMSYNSTYD---KVIIERTETGAFNAADGSNDYQIVFGGDTGFLNDVLKLNQANEVS 236 Query: 222 AQNAQLTVNNVAIENSSNTISD------ALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 NA++ + + + +SD + IT +L T G +TL ++ +T A + Sbjct: 237 GTNAEVEFIDPIMSSEPIVVSDSRTNRVTVGGITFSLTGTTEGFETLNVSSNTDAAFEKV 296 Query: 276 KDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTL 318 ++V+ YN+ I SL + +A + + +G L DS L Sbjct: 297 MEFVDTYNATITELRSLLSEPRYRDYPPLTEEQRRELSEREAELWDEKAKSGLLRNDSML 356 Query: 319 RTIQTQLKSMLSNTV-SSSSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVG 374 ++ Q+++ L V ++ + ++ QIGITT G LE+D DKL AAL+ D V Sbjct: 357 NSLLAQMRADLYAPVQTNGQFSSITQIGITTSSDYRLGGFLEVDEDKLRAALEADPDSVH 416 Query: 375 ALIVGDGKKT----GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKL------------ 418 L+ G + + + S TG++ +S T+N + Sbjct: 417 QLLNGTANSSLTSIPVKDRTSQQRSEIYSQTGLVGRIRSSLSSTMNDIVARAGNERRTEQ 476 Query: 419 -----------TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 K + R+ RY QF++++ +M N+ + L Q F Sbjct: 477 QFTIGRQILDVDKRIDHFQQRLIQIENRYWAQFSRMEQMMNQANAQYASLQQFF 530 >UniRef50_C0Z6U7 Flagellar hook-associated protein 2 n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6U7_BREBN Length = 503 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 102/507 (20%), Positives = 191/507 (37%), Gaps = 50/507 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I G+ SG+D ++ + AQ+ + + + S K AY + + L Q Sbjct: 2 GIRLTGMASGMDTEKMIKDMMKAQRQPVNRLEKSKISTEWKRDAYREMNTLLADLQKTVN 61 Query: 63 ALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + + F+ +S A SA G Y+I V LA+++ + Sbjct: 62 DIRYSANFNKKVASSENDAIASAKVTGTPKLSSYSIEVQKLAKSEMPASMQFDIAASITS 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 + + + D D A ++ + IN + GV A ++ N S+ Sbjct: 122 SKQQLGASFEFAIDGDTANTIKVEATDTIDSVIAKINGSGKGVEA--FHIDNKLVIKSIN 179 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 N+ G DN + V G S +G A+A+SN VA ++A + +N V + SN Sbjct: 180 GNNLGGDNQFDIKVQGGGDG-SVLGMTAAATSNPSSTRVAGEDAVVVINGVKQTSKSNVF 238 Query: 242 SDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT---KYTA 297 + + + + TG T+ D +IK +V YN++I+T + KY Sbjct: 239 K--YDGVEFTVKTINTGNPLTINAKTDEEAVFNSIKGFVEKYNNVIETINKKITEPKYKG 296 Query: 298 VDAGADSQS--------------SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK---- 339 D + + +G L+ DS L + +++ +S ++ + Sbjct: 297 YQPLLDEEKEALGDKTAEKMDKMAMSGILIRDSYLTSALNEMRRSISAPLTGTGVNSAFD 356 Query: 340 TLAQIGI-------TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT--- 389 TL++IGI + +GKL L+ +KL A+ + + V L T T Sbjct: 357 TLSEIGIGGPPTGKSAYQENGKLYLNEEKLRNAISNNGADVVKLFTSFSSSTDTGTKYNE 416 Query: 390 ----------IGSNLTSWLS--TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 + ++ +G + +SK + ++ D + DR+ RY Sbjct: 417 SGIAERLYSNLSKAMSDITKQAGSGTVVNDDSYLSKKIGQMADDIKSWEDRLKIIENRYY 476 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENN 464 +Q+ ++ M+ S S+ Q Sbjct: 477 KQYAAMETAMSKAQSQGSWFAQMLGQK 503 >UniRef50_A8FHX1 Flagellar hook-associated protein 2 n=2 Tax=Bacillus pumilus RepID=A8FHX1_BACP2 Length = 504 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 110/508 (21%), Positives = 199/508 (39%), Gaps = 56/508 (11%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 G + D+ I+ L ++A L ++ Q+ + + +Y + S + L Sbjct: 4 RITGFSNVFDIDEIVSKLMKTEQAPLDKMTRQKQTLEWQRDSYREVTSKVKELDDLIYKL 63 Query: 65 --SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + + A TSS + T G+ A +I+VT LA A + T T A Sbjct: 64 ELGRPSTYGAKKVTSSNESA-VTATGSTNAASGSINVTQLATASVFKSSGTSGFTP---A 119 Query: 123 TSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSAS---IINVGNGEYRL 178 + P T+ I+ A++ ++ I +NN++ GV+A I + N + Sbjct: 120 NGTFTFEVTTPDSTKPKTVTINTADTDTIDDIVKKLNNSQLGVTAYKGQIFDGSNYVDTV 179 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 ++TS TG ++ + + + +G+ N + + Q AQ +N + +EN++ Sbjct: 180 ALTSRTTGEGVSIKATDGNSASFFTQLGFQVD-GDNKLVATTQGQKAQYEINGLKMENNN 238 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS-------- 290 NT A IT L T +L ++ D IK +V+ YN L++ + Sbjct: 239 NTFEQA--GITYELKGTTDKPVSLNVSTDVDTIFDKIKQFVDKYNELVEQVNGKVNEKRN 296 Query: 291 ---------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-- 339 + + ++ +G L DS LR ++++S +++S Sbjct: 297 RDYHPLTAEEKKAMSDKEVELWETTAKSGLLRSDSILRGGASKIRSDFYAEITTSDANKI 356 Query: 340 TLAQIGITTD---PSDGKLELDADKLTAALKKDASGVGALIVG-----DGKKTGITTTIG 391 + QIGITT GKLE+D +KL A++ D V + + D K Sbjct: 357 HITQIGITTSNKYKDGGKLEIDEEKLRKAIEADPQNVSQMFISGKLNVDSKDKDKAQQQY 416 Query: 392 SNLTSWLSTTGIIKAATDGVSK----------------TLNKLTKDYNAASDRIDAQVAR 435 + + A T + K L+ LTK + DR+ R Sbjct: 417 NEQGIIYRVQNSLTAFTKSIQKKAGSTTMQLKEYVLGKDLDSLTKRMDTFQDRLKMVETR 476 Query: 436 YKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 Y ++F+ +D + LN+ S YL+Q Sbjct: 477 YYKKFSAMDSAIQKLNNQSGYLSQLLGQ 504 >UniRef50_A4VKN6 Flagellar capping protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VKN6_PSEU5 Length = 451 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 134/450 (29%), Positives = 226/450 (50%), Gaps = 40/450 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G+GSG+D+ SI+ S+ AA++A ++N + T +++A G LKSA++ FQTA Sbjct: 2 VGVTGIGSGIDIDSIVKSMVAAERAPKEAQLANLEKKTTTQITAIGALKSAISEFQTALR 61 Query: 63 ALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K +LF A S TSS T + + A AG Y + V LA + + + D+ Sbjct: 62 ALNKPELFQARSATSSKTDLVGVSASPKAGAGSYQVEVRSLATSSKVALKAFPDNAGAPA 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNGEYRLS 179 + +T++ G PITID S+ ++L+GIRDAIN G++A+I+ G RL Sbjct: 122 TFAGGTMTVKVGEKSLPITIDQSS--NTLAGIRDAINAGGKEMGLTATIVTDDAGA-RLV 178 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSF-----MGYDASASS-------------------NG 215 ++S TG +T+ DA +G+D S +G Sbjct: 179 LSSATTGAGEDITVEAKSTDAALGAYSLEDLGFDGSTVEPKPNEDDPEAYAAAMTAYRSG 238 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQT 273 AQ+AQ++V+ + I + SN I A+E +TL+L T T+++ +D + + Sbjct: 239 PMTLTQAQSAQVSVDGLLITSKSNKIEGAIEGVTLDLKGKTAANEPLTISVAEDKAGVKK 298 Query: 274 AIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV 333 I+ +V++YN LI ++ TK T V +G GAL+GD++ R + ++S L N Sbjct: 299 QIQSFVDSYNKLIGVINAQTKVTPVGSGGAPL---AGALVGDASARLVLGTIRSELVNVQ 355 Query: 334 SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 + + L +GITT DG L+ D KL AL + + + L G+ G+ + S Sbjct: 356 GEGAIRALFDLGITTQ-KDGTLKTDDTKLDDALSNNFADLPGLFTGN---NGLAARLDSK 411 Query: 394 LTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 L + T GI++ +++T++ + K + Sbjct: 412 LKPYTETGGILEQRNKVMTETISGIGKQRD 441 >UniRef50_Q485N1 Flagellar hook-associated protein 2 n=2 Tax=Alteromonadales RepID=Q485N1_COLP3 Length = 478 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 121/488 (24%), Positives = 235/488 (48%), Gaps = 42/488 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M ++ G+GSGL +S I++++ A+KA ++ + QQ+ T +SA G LKSAL + ++ Sbjct: 1 MPDLTFTGIGSGLKVSEIVNAIVGAEKAPFISRANKQQAEMTTDISAIGALKSALESVES 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + ++L+ AD + + + + + + + +A G Y++ V L+Q+ L + +D + Sbjct: 61 SISSLADADNYQLRTASGADSFVGLSASKDAQIGNYSVKVDVLSQSHKLMSGAMAEDEQ- 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG--VSASIINVGNGEYR 177 + L I I + +A+ +LS IRDAIN++ V A+I+ G++ Sbjct: 120 ---VGEGTLNIAVAETNFNIAV---SASDTLSDIRDAINDSDDNESVIATIVTDDAGQH- 172 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGY-------------DASASSNGMEVSVAAQN 224 L +TS +TG+ NA+T +V+ D + G D S + A + Sbjct: 173 LIMTSKETGVANAITTTVTDLDDNNNVDGLVGLSRLAYDVSDPDDSLHIKNLTQIDEAVD 232 Query: 225 AQLTVNN-VAIENSSNTISDALENITLNLNDVTTGNQT-----LTITQDTSKAQTAIKDW 278 AQ+T++ + + +S+N + ++ + + + + ++ ++ ++ ++ + Sbjct: 233 AQITIDGTLVVTSSTNEFKNVIDGVDITAKKMHDVDDNDDVSRISFKENNGNIKSGLEGF 292 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 V +YN L L +G L GDS LR + +L+ S + Sbjct: 293 VKSYNELQVLSKQLGAAGESG---------SGPLAGDSLLRGVMGKLRQQFSQAFDMGNG 343 Query: 339 KT--LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 + L+Q+G+ +D G L LD + L + D +GV VG + G +++ Sbjct: 344 NSMSLSQLGVESDQ-YGVLSLDTETLNEYIDSDVAGVQQFFVGTDSENGFASSLEELTGF 402 Query: 397 WLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + T G+I+ D + L++L DY A R+D+ AR +Q+ +D+++ +LNSTSS+ Sbjct: 403 YTDTDGVIQNRIDSGTSQLDRLDDDYLAFERRMDSLEARLFKQYNAMDLIVANLNSTSSF 462 Query: 457 LTQQFENN 464 L Q +N Sbjct: 463 LLAQLDNM 470 >UniRef50_Q3J8M3 Flagellar hook-associated protein 2 n=1 Tax=Nitrosococcus oceani ATCC 19707 RepID=Q3J8M3_NITOC Length = 677 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 138/417 (33%), Positives = 216/417 (51%), Gaps = 33/417 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I+S G+GSGLD+ S+++ L AA+ ++ Q++ A LSA GTLKS L +F+ A + Sbjct: 2 ITSTGIGSGLDVESLVNQLVAAEGRPQQLRLNRQEAKMQATLSAMGTLKSELASFKDAVS 61 Query: 63 ALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L F A ++ + +A+ A A G Y++ V LAQAQ L ++ D + Sbjct: 62 KLDSPSAFQAIKASVGNRDLLTASAAAKAATGTYSVEVQQLAQAQKLASKAFADSSAALG 121 Query: 122 ATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 + ++ T D+ + I +A++SLSGIRDA+N A GV A+IIN G Sbjct: 122 TGTLSFRFGSYDNNTNTFTGNPDRTAQIVTIDSAHNSLSGIRDAVNEADIGVQANIINDG 181 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSNG----MEVSVAA 222 G+ RL T+ GL N++ ++VS +D S + YD + + +G + +VAA Sbjct: 182 TGD-RLVFTAQTMGLANSLEITVSDEDGNNLDESGLSQLAYDPTGADSGSGKSLTETVAA 240 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNA 281 Q+A+L V+ + + NTI+ +E +TL LN TLT+ D A ++ +V A Sbjct: 241 QDARLVVDGLTVTRPQNTITGMIEGVTLELNSAELDSPTTLTVAADGHIASKSVNGFVEA 300 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYK 339 +NSL T +SL+ Y + ++ G LLGD++LR I+ +L+ + S+TV+ Y+ Sbjct: 301 FNSLAKTLNSLSSY-------NPETQEKGPLLGDASLRGIENRLRRVASDTVTGLSGPYR 353 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 TLA IGITT DG L+LD KL ++ D V L G G + Sbjct: 354 TLADIGITTQ-RDGTLKLDESKLQQVVESDPEAVARLFTGGGSSSDPLVRFVEATDE 409 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%) Query: 387 TTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVL 446 + + L L + G ++ DG++ + ++ R+DA RY+ QFT LD L Sbjct: 594 AAHLNTYLDQVLDSEGFLENRIDGLNHRIGDFSEQREDLVQRLDAIEKRYRAQFTVLDSL 653 Query: 447 MTSLNSTSSYLTQQFENN 464 + L +TSS+L+QQ N Sbjct: 654 LGQLQTTSSFLSQQIANL 671 >UniRef50_Q1JZP6 Flagellar hook-associated 2-like n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZP6_DESAC Length = 488 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 126/501 (25%), Positives = 237/501 (47%), Gaps = 54/501 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+ G+ +GL+ I+ L ++A L + Q+ + +L+A+ L S L + A Sbjct: 1 MAGITFSGLATGLETDDIITELMTLERAPLDRLEAQKEAEATRLAAFKQLDSRLEDLRAA 60 Query: 61 NTALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ +++ ++ + SS A +A++ A +G Y I+V LAQ Q + DT Sbjct: 61 VGDLNITSEVRTSRISLSSEDALTASSN-GAASGSYDITVVQLAQMQKSVSVGVSSDTVA 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNG--E 175 + T + TI + +N+SL G+ D+IN + K GV ASIIN G+G Sbjct: 120 GLGTGTFTV--------AGKTITVDESNNSLQGLADSINALSEKTGVEASIINDGSGANA 171 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 Y L +T D + T S + D+ + + + + + +AQ A V+ + + Sbjct: 172 YHLVLTGQD--AQTSFTASSNLVDSEGAVLPF-------NLTETRSAQQAVAYVDGIQVV 222 Query: 236 NSSNTISDALENITLNLNDVTTG----------------------NQTLTITQDTSKAQT 273 + +NT+S + +T++L+ V+ + +T+ DT + Sbjct: 223 SDTNTVSGVIPGVTMHLSSVSDTSYSGTYEAGVDPWEWADPPQYDSTLMTVEPDTEALKE 282 Query: 274 AIKDWVNAYNSLIDTFSS------LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 + +V++YN+++D S+ +A D A ++ + + GDST+ I+ QL++ Sbjct: 283 KVSTFVSSYNAVMDWISAGYDEFGAAAPSAEDIEAGAEDILSDVVRGDSTVNGIKRQLQN 342 Query: 328 MLSNTVS-SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGI 386 +LS+ + + S L+Q+GI+T DG + L+ AL+KD GV +L+ G+ G+ Sbjct: 343 ILSSQIDTTGSMSVLSQLGISTQ-RDGSINLNDSAFNEALEKDFDGVVSLLAGENDTEGV 401 Query: 387 TTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + L T+G+ + + +L ID + A + +F+ L++ Sbjct: 402 MKKFNTKLLEMTGATSGMYAEKQERYDSAIKRLDNQIARTEPLIDKKEATLRAKFSALEL 461 Query: 446 LMTSLNSTSSYLTQQFENNSN 466 L++ +NS SS+LTQQ + + Sbjct: 462 LVSDMNSQSSFLTQQMDMLTK 482 >UniRef50_Q2IQN2 Flagellar hook-associated protein 2-like n=3 Tax=Anaeromyxobacter RepID=Q2IQN2_ANADE Length = 452 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 128/467 (27%), Positives = 207/467 (44%), Gaps = 21/467 (4%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 AS + G+ SG+D ++I+D L A + L + +Q++F ++SA G + ++L+ A Sbjct: 3 ASFRAGGLASGMDTNAIIDQLVALESRPLDQLRRRQAAFRTQISALGDIAASLSGLSAAA 62 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + AT S++TAFSA +AIAG Y ++V LAQ + A Sbjct: 63 ADLGDHGVL-ATQARSTSTAFSAAPGADAIAGSYRLAVKALAQPAKWRSAAFAAGAGVAG 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T + QG PI + +SL+ + AI + A VSA +++ G + LSVT Sbjct: 122 GTLRLTV---QGTAVAPIAV---PDGASLADVAYAIRQSGAAVSAVVLDDGTSSW-LSVT 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 + DTG + + + + ++ A + G A+NAQ+ V+ + + N I Sbjct: 175 ARDTG--HPLDGAPADALSISFTPSAGAVGQAPGFAELQPARNAQVEVDGLTFTRTGNVI 232 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 +DAL +TL L + L + D + Q ++ V+ YN ++ Sbjct: 233 ADALPGVTLTLAAAGGPAEDLVLGTDPAGTQARLQKLVDGYNGVMRLLQ-------RHLA 285 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDGKLELDA 359 S L GDSTLRT+Q +L+ +L V S +TLA +G+ T DG L +DA Sbjct: 286 VAKDSDRATTLAGDSTLRTLQARLQRVLVTEVPGLSSGVRTLADLGVRT-GRDGSLSVDA 344 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 L++AL +D + AL G + G + DG+ +T+ L Sbjct: 345 ATLSSALARDPAAANALFSTSGTGLAAVVKAL-VADHTRAGDGALVLRQDGLGRTVKDLD 403 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 A RIDA QFT ++ ++ L S S+L Q Sbjct: 404 GQAAALQLRIDAFQQNLIRQFTAMESTVSGLKSIGSFLAGQTTQQQK 450 >UniRef50_A2SJT0 Flagellar capping protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SJT0_METPP Length = 477 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 153/482 (31%), Positives = 247/482 (51%), Gaps = 31/482 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD+SSI+ L A ++ L + + ++SAYG L+S ++ A Sbjct: 2 AISSPGLGSGLDVSSIVSQLVALERKPLEKMQTAATFMQTQVSAYGQLQSLVSAVGDAAK 61 Query: 63 ALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL+K L+ A S TS T+ +AT + A G Y++SV+ +A+AQ+L + T Sbjct: 62 ALAKPTLWQAASAGTSDATSVAATASAGAAIGSYSVSVSQIARAQSLASAVFTAPTDVV- 120 Query: 122 ATSDSKLTIQQGG-----------DKDPITIDIS-AANSSLSGIRDAINNAKAGVSASII 169 K+TI+ GG T+++ A ++L ++ IN A AGVSA+I+ Sbjct: 121 --GAGKMTIELGGYNVANDPAFTPKTGSTTLELEFAEGTTLEQVKTQINAANAGVSAAIV 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 NG RL++TS TGLD+ + ++VS + + YD ++ +N M + AA NA ++ Sbjct: 179 RDANGA-RLTLTSTTTGLDSTLRVAVSDATGALTGLAYDPASGANPMTQTQAAVNALASI 237 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N +AIE+ +N ++ L+ +TL+L VTT T+ +T +T + AIK + +AYN+L Sbjct: 238 NGLAIESPTNRLTGTLDGVTLDLVKVTTAPVTVNVTTNTGTMRDAIKKFSDAYNALNTYL 297 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN-TVSSSSYKTLAQIGITT 348 + TKY D ++ G L GDS ++ Q ++ML + +S+ L+ IG Sbjct: 298 VTQTKY-------DEENKIGGTLQGDSAAVGLRNQFRAMLRQDSAASAELTRLSDIGFNV 350 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT----TIGSNLTSWLSTTGII 404 DG + LD KL AAL K + + L + +T T G+I Sbjct: 351 Q-RDGSIVLDNAKLDAALAK-PAELSKLFTTNDTANPASTGLGVRFQKLADMSTGTEGVI 408 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + G+ L + D + +DR D R +Q+T LD M L++ S+Y+TQQ + Sbjct: 409 ASRNAGLKARLERNQDDQDKVNDRADRMQVRLTQQYTALDTQMAKLSALSTYMTQQLDGL 468 Query: 465 SN 466 SN Sbjct: 469 SN 470 >UniRef50_B0TH38 Flagellar hook-associated protein 2 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TH38_HELMI Length = 526 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 101/534 (18%), Positives = 197/534 (36%), Gaps = 82/534 (15%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++ G+ SG+D+ +++ + I ++ + + L S L F+ A Sbjct: 2 TMRIGGLASGMDIDAMVKEMMKGHVVRRDQIYQKKVQTEWRQTEIIDLNSQLRDFRDAIF 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA- 120 L ++ S S TS + +AT +A + + V LAQ T + T A Sbjct: 62 KLKLSNSTSPKSVTSGNSIAVTATATADAANTSHMVKVKSLAQGVTKGSEAAISATANAN 121 Query: 121 --------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 TS T++ G + + N S+ + IN A AGV A+ Sbjct: 122 KNALKTHLGLTSTDVFTMKLNGKEISV-----DPNKSIYEWVNNINKAGAGVKANYDVNL 176 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG---------------YDASASSNGME 217 + R+ + + + G + + + D Q +G + + + + Sbjct: 177 D---RVFLYTTEQGPTTKIDFTGTTDAQAQEMIGKLKLGASPTDNWSLDVNGDGTPDNVG 233 Query: 218 VSVAAQNAQLTVNNVAIENSS-NTISDALENITLNLNDVTTGN----QTLTITQDTSKAQ 272 A++ ++ + N S NT++ + + + T G TL ++ D Sbjct: 234 YKWVGTAAEVEIDGITYSNLSKNTLT--VAGVVYSFLQKTEGTAEPIVTLQVSPDLEGTV 291 Query: 273 TAIKDWVNAYNSLIDTFS-----------------SLTKYTAVDAGADSQSSSNGALLGD 315 +KD+V+ YN +++ + + + + +G L + Sbjct: 292 KTVKDFVDKYNEMLNKLNGELKEKTYRDFLPLTDEQKRAMKENEIKLWEEKAKSGLLRNE 351 Query: 316 STLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD--PSDGKLELDADKLTAALKKDAS 371 S+LR + +Q++ +S+ + YK+L+ IGITT GKL L+ D L AL ++ Sbjct: 352 SSLRNLVSQMRFAVSDAIGELKGKYKSLSSIGITTGLYSEGGKLYLNEDVLLKALTENPD 411 Query: 372 GVGALIVG-------------------DGKKTGITTTIGSNLTSWLSTTGIIKAATD--G 410 V L G + + + G + A D Sbjct: 412 VVSELFGTTVTKADPSNPENKINDLSRSGVAVRLYDRLKEAMDKMRVRAGTLPGADDMSD 471 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K L + K + +R+ +Y QF+ L+ + N+ S++L+QQF Sbjct: 472 LGKQLRRYNKQLDDMEERMHRLENQYYRQFSALETALQRANAQSAWLSQQFGAK 525 >UniRef50_UPI0001850952 flagellar capping protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850952 Length = 496 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 107/507 (21%), Positives = 196/507 (38%), Gaps = 55/507 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF-QT 59 M+++ G+ SG+D SI+ SL ++ + + ++ + Y + + L F QT Sbjct: 1 MSTMRVGGLASGMDTESIVKSLMEVEQMKVDKLKQNKTYLEWQRDDYREMNTMLLNFDQT 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDD-- 116 + + F+ + S +TA S + +IS+ LA L + R D Sbjct: 61 IFDGVFRQSTFTKKTVDVSDSTALSVKNINSTSEFTGSISIEQLATGSRLVGDSGRTDID 120 Query: 117 -----TKTAIATSDSKLTIQQGGD----KDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 TI+ + + I SL+ + + IN +K GVS Sbjct: 121 PNTLLNSATSLNLSGTQTIRVATQGKPASEGVEISFDPTKESLNDVINKIN-SKTGVSMY 179 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 ++ V++++TG N +S +D+ + + + + NA+ Sbjct: 180 FDQ---ATGKIGVSADETGAGN-----ISLEDSTGTLFSSLNLTAGSTNLQTTDGNNARF 231 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T N + +E SSNT+S + + L L T+G T + T DT + +V+ YN LI Sbjct: 232 TYNGLQLERSSNTVS--INGVELTLKKETSGAEVTYSSTTDTDSILKEVVKFVDEYNKLI 289 Query: 287 DTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 + K + + + + G L GD+ L + +++ + Sbjct: 290 EKMGDEVKERRSKEYKPLTDMEREGLSEDEIKKWEEQARKGTLYGDNNLSSALNKMRVDI 349 Query: 330 SNTVSS-SSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 ++V S +LA+ GI T GKL +D DKL A+ D + + + DG Sbjct: 350 YSSVQGNSGLASLAEFGIKTSSNYLEQGKLIIDEDKLRQAISDDPNKLYETFMADGVTDA 409 Query: 386 ITTTIGSNLTSWLSTTGIIKAA---------TDGVSKTLNKLTKDYNAASDRIDAQVARY 436 + T G I+ + + + L + + + R+ RY Sbjct: 410 EQGIARRLRDTVKDTMGAIEQKAGKTSSGNDSFTIGRNLKNVDRQIDNWEQRLIDIEDRY 469 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFEN 463 QFT ++ ++ NS SSY+ QF Sbjct: 470 WRQFTAMEKMIQQSNSQSSYIMSQFYQ 496 >UniRef50_C0GJK0 Flagellar hook-associated 2 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJK0_9FIRM Length = 542 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 93/556 (16%), Positives = 190/556 (34%), Gaps = 108/556 (19%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+++ G+ SG D I+ L ++ + Q+ + + Y + + + +F+ Sbjct: 1 MSTLRIGGIASGFDTEQIIRDLMRVERMKVDRTFQQRQTLQWQKEQYREMTNKVRSFRDQ 60 Query: 61 NTA-------LSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT 112 L+ A S TSS S + A G+ T V A A Sbjct: 61 YFDILKPETNLTSASAMKKMSATSSMPGIVSVSAGAIAFQGESTFQVLQSATAAKAIANE 120 Query: 113 TRD-----------------DTKTAIATSDSKLTIQQGGDK---DPITIDISAANSSLSG 152 +K A + L + G + + I+IS ++ + Sbjct: 121 VTAGHEEGMRLSMTDTMATISSKLGEAAGEGVLNFEDGRFSLTINDVEIEISESD-TFGS 179 Query: 153 IRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 + INN+ AGV S + ++T+ +TG + ++ S +G +A Sbjct: 180 VLQRINNSNAGVQVSYSTFSDT---FTMTARETGAGH---ITTDDGGNFFSALGLVPNAE 233 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ---------TLT 263 V + ++A +N ++N+ + ++ IT ++N + Sbjct: 234 GE---VGQSGRDAVFRINGFEGTRTTNSFT--IDGITYSINQQVDPPVDPEAPLETIRIN 288 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFS-----------------SLTKYTAVDAGADSQS 306 ++ DT I+ +++ YN LID S + + + Sbjct: 289 VSVDTDAIFNTIEKFISDYNQLIDDISGKLNEERFRGFPPLTDEQKEAMSDREIELWEEK 348 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP---SDGKLELDA--DK 361 + +G L DS L + ++S L + V L+ IGI T +GKL L + Sbjct: 349 AQSGLLRRDSALENMLRNMRSALYDMVGEG---HLSSIGIETSRNYLDNGKLVLKNGGND 405 Query: 362 LTAALKKDASGVGALIVGDGK-----------------KTGITTTIGSNLTSWLSTT--- 401 L AA+ ++ V L ++G+ + L + TT Sbjct: 406 LRAAIAENPDSVVDLFARRSDISYSPNLSAEDRSQRYQESGLAHRLSDILQDNIRTTRNS 465 Query: 402 --------------GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 G + + ++ + + ++ + + +Y +FT ++ + Sbjct: 466 NGRKGVLLERAGIVGDTTEFDNYYDNQIKQVNRQIDRINEMLQRREEQYYRRFTAMEKAL 525 Query: 448 TSLNSTSSYLTQQFEN 463 L+S +L Q + Sbjct: 526 QQLHSQGDWLMMQLQQ 541 >UniRef50_Q0HKR3 Flagellar hook-associated 2 domain protein n=5 Tax=Shewanella RepID=Q0HKR3_SHESM Length = 455 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 143/468 (30%), Positives = 244/468 (52%), Gaps = 28/468 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++S+G+GSG+D+ I+ +L A+ A + + A++S G LKSA++ F Sbjct: 2 GLTSVGIGSGMDIGGIVTALVNAESAGKIAKFDVNEGKLNAQISGIGALKSAMSEFNDKL 61 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+KA+ F S TSS SAT A++G Y I V LAQ+Q + T D T Sbjct: 62 KTLAKAETFGSQKVVTSSKDYLSATVDKTAVSGTYQIKVEQLAQSQKVGTAVATDTTSPI 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + L+I+ G ID+SA + SL+ I + IN + V+A+I+N G +L Sbjct: 122 ---GEGALSIKVGS-GTAFNIDVSATD-SLTDIMNKINKSDDNTDVTATIVNGELGP-QL 175 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + S TG DN ++++ + A + + M A+NA + V+ V + + S Sbjct: 176 VLGSKKTGEDNQISVTATDSGAGTGL------SDTFTMSEVTPAKNAIVYVDGVKVVSDS 229 Query: 239 NTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 NT+ A+ ++L L T+T+++DT+K +TAI+ +V +YNSL+ T +LTKY Sbjct: 230 NTLDKAITGVSLTLTAADVDKTTTMTVSKDTAKTKTAIEGFVESYNSLMTTIQNLTKY-- 287 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTDPSDGKLE 356 D+ + G L GD+ R+IQ+QL++M+S+ S + LA +GI T +G LE Sbjct: 288 -----DADTKQAGILQGDALPRSIQSQLRTMVSSEFDTSDGKQVLANLGIKT-TREGLLE 341 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 +D+ KLT +LK D + L + TG++ + + +++ + GII + + + L Sbjct: 342 IDSTKLTESLKNDKGTISELFT--SENTGLSAKMSGLVDTYIKSGGIIDGRDNSLDEQLA 399 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 ++ S R+ A R +QF +D+++ +LNS SS L + ++ Sbjct: 400 RIADSREQLSTRMAAYSDRLYKQFNAMDLVVANLNSQSSMLLSRLDSL 447 >UniRef50_P39738 Flagellar hook-associated protein 2 n=4 Tax=Bacillus subtilis group RepID=FLID_BACSU Length = 498 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 102/500 (20%), Positives = 209/500 (41%), Gaps = 46/500 (9%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA- 63 G+ SG+D+ I+ L ++A L ++ ++ + + +Y + S + Q + Sbjct: 4 RITGLASGMDIDDIVSKLMQTERAPLDKLTQKKQTLEWQRDSYREVNSKIKELQDYMSKN 63 Query: 64 -LSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+ + + + TSS + +AT + +A T+ V LA A T T+ Sbjct: 64 TLTYPSTYQSKTVTSSNESVLTATGSVSAPNSSSTVEVASLATAATYKANNYTGYTQ--- 120 Query: 122 ATSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKAGVSASIINVGNGEYR--- 177 + + G+ T++IS + ++ + +N++ GVSA + NG Sbjct: 121 GDYNLAFNVVAPGETTAKTVNISVTSADTIDNVISKLNSSDLGVSAFKDKIWNGTEYVET 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 ++ +S TG ++ + S S + + N + NA++T+N +E Sbjct: 181 IAFSSKATGAGGSIQAADSATADFMSGQLGFSLDADNKLTAYKEGTNAKVTINGFEMEKL 240 Query: 238 SNTISDALENITLNLNDVT--TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK- 294 +N + + +T ++ + T TG T +++ D IK++V+ YN L+D+ + K Sbjct: 241 TNNFT--VNGVTYSIKNTTAATGPVTTSVSTDVDGIYNQIKEFVDKYNELVDSLNEKLKE 298 Query: 295 ----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSY 338 + + + + +G L DS++ T Q+++ V++ Sbjct: 299 EKYRDYTPLTSEQKEAMSDKEVELWEEKAKSGLLRNDSSISTGTNQMRTDFYTQVNADGK 358 Query: 339 KT-LAQIGITTDPSD---GKLELDADKLTAALKKDASGVGALIVGDGKKTGI-----TTT 389 L + GITT + G LE++ +KL A + +D GV L + Sbjct: 359 TYQLTEFGITTSSAYQLRGHLEINEEKLKAKIAEDPQGVANLFTSGTNDSNYSDKGIMKR 418 Query: 390 IGSNLTSWLST------TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 I + L S + + + A++ + K LN ++ + DR++ RY +F+ + Sbjct: 419 ITNTLRSTVKSIEAKAGNSTMGASSYSIGKNLNSISTEITDMQDRLNTIENRYYSKFSAM 478 Query: 444 DVLMTSLNSTSSYLTQQFEN 463 D + +N +SYL+Q Sbjct: 479 DSAIQKMNEQASYLSQLLVQ 498 >UniRef50_A1WCE3 Flagellar hook-associated 2 domain protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WCE3_ACISJ Length = 479 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 139/489 (28%), Positives = 221/489 (45%), Gaps = 37/489 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SS G+GSGL + I+ L A ++ + + + S KLS + +KS ++T A Sbjct: 2 GLSSTGIGSGLQVEDIVSKLVALERQPIAKLQSVALSMQTKLSIFSQVKSMMSTLSDAAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTA-GNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 LSK + TSS +A + + G A A + I V L + + Sbjct: 62 KLSKNSTWGGMVATSSNSAAVSVSVIGAASATSFGIGVQQL---ARAQSAASASLGAPGA 118 Query: 122 ATSDSKLTIQQGGDKDPITIDI-------------SAANSSLSGIRDAINNAKAGVSASI 168 + L+IQ G T A SL+ I IN AKAGV+A++ Sbjct: 119 SVGGGSLSIQLGTWTGTDTASPQFTEGAAGAVPVQIDAGDSLATIASKINGAKAGVTATV 178 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYD-----ASASSNGMEVSVAAQ 223 + NGE RL V S+ TG + + V+ D A A + AQ Sbjct: 179 LRDANGE-RLLVRSDSTGASSGFRIRVTEDGAAPGLSNLAFDPQGAPGAGMAANAIQYAQ 237 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 NAQ TVN +A+E+++NT +D + ++ + +TT + + DT + I+D+VNAYN Sbjct: 238 NAQATVNGIAVESATNTFTDTIPGLSFTASQITTAPVEVAVGSDTETLKKNIQDFVNAYN 297 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLA 342 L D + TKY DS S + GAL GD T +Q L+SM+++T +++ LA Sbjct: 298 GLNDLLGASTKY-------DSASKTAGALQGDGTTVALQNTLRSMIASTAEGTGAFQRLA 350 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD----GKKTGITTTIGSNLTSWL 398 IGI + GKLE+ ADKL AALK + + AL + + G+ + + L Sbjct: 351 DIGIDI-KTGGKLEVSADKLDAALK-NPEALKALFATNVGSGSQANGLAVKMKALADQML 408 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 G++ + ++ + D + +R R + Q+T LD M SL+ +Y+ Sbjct: 409 LPEGLLDNKASALGASIKRNKSDQDRVDERASIMEKRLRAQYTALDAKMASLSGLGAYVG 468 Query: 459 QQFENNSNS 467 QQ + + Sbjct: 469 QQVSQWNRT 477 >UniRef50_D0KAZ0 Flagellar hook-associated 2 domain protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KAZ0_PECWW Length = 479 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 187/481 (38%), Positives = 279/481 (58%), Gaps = 15/481 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+IS G SG +++LD LT +++ +TP++NQ+ + ++ +A+ TLK+ALT ++A Sbjct: 1 MANISFTGSTSGF--TAVLDQLTTFEQSRITPVNNQKKIYQSRDTAFDTLKTALTKLESA 58 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYT-ISVTHLAQAQTLTTRTT---RDD 116 N AL+KA+ + TS TS + T ++ + + V +LA A +L + +D Sbjct: 59 NEALAKANSINKTSITSGESKAFTATTSSSASSGSYSVEVENLATAHSLLSSEFSSSKDP 118 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T LTI Q G + P+ I ++ +SL GIRDAIN VSASII + Y Sbjct: 119 LGTTTDGGTRTLTISQPGQEKPLEIQLTDKQTSLEGIRDAINKTNGSVSASIIKADDNTY 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGY--DASASSNGMEVSVAAQNAQLTVNNVAI 234 L++T+ DTG MT+SV+GD L S + Y D A S M+ AA+NA + +N + I Sbjct: 179 YLALTAKDTGTQAKMTVSVTGDTLLNSKLNYTPDDGAGSGAMKQQAAAENAVVKLNGITI 238 Query: 235 ENSSNTISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 SNT++DA++ ++LNL + + LTI DT+ AI++WV+AYNSL T ++ Sbjct: 239 TRQSNTVTDAVDGVSLNLKAESAPGTAEKLTIATDTAPMNKAIQEWVDAYNSLQTTIGNV 298 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 T +TA D + SSNG LLG+ST+R IQ LK+ +S+ S S TL ++GI +P D Sbjct: 299 THFTAADHNTATPDSSNGVLLGNSTVRGIQATLKTQISSAQSGMSISTLNEMGIKQNPKD 358 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT-----GIIKAA 407 GKLE+DA KL +L + +S V VGDGKKTG T + + L L T+ G I+ A Sbjct: 359 GKLEIDATKLQTSLAEKSSSVTEFFVGDGKKTGFATQVNTYLDGVLDTSTGNKKGAIQIA 418 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 D ++ TL + K ID +ARYK QF++LD L++ LNST +LT+QF + S Sbjct: 419 KDSIADTLKTIEKTRVRTQLSIDDTIARYKSQFSKLDKLVSDLNSTGDFLTKQFAALTKS 478 Query: 468 K 468 + Sbjct: 479 Q 479 >UniRef50_D0IYG0 Flagellar hook-associated 2-like protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IYG0_COMTE Length = 480 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 32/487 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 2 GISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQLD 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+K + + TSS +A + T NA+ Y + V+ +A QT+ + +T Sbjct: 62 KLAKPATWLGNTLTSSNSAQVAGTATSNAVQATYDVKVSQMASGQTIGSSLVTSNTTLGA 121 Query: 122 AT-------------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T K + G T+ I+ ++SL+ I IN K VSA++ Sbjct: 122 GTLTISMGQWDSKAIGGFKANTNKDGSDVKFTVTITDTDNSLAKIAAKINAEKGDVSATV 181 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ-SFMGYDASASSNGMEVSVAAQNAQL 227 + GE RL + S TG ++A + +G Q ++ G DA+A+ GM+ S AQ+ Sbjct: 182 LTDHTGE-RLVLQSKTTGTNSAFKVEATGAGLQQFAYNGTDAAANETGMKRSAIAQDTLA 240 Query: 228 TVNNVAIENSSNTISDALENITLNLND---VTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 T+N + + + +N + +TL ++ +TI DT+ A+TA+K+ V +YN+ Sbjct: 241 TINGIEMASHTNVFEEVAAGVTLTVSQKMAAADAPVRITIANDTATAKTALKNLVESYNA 300 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQ 343 L + ++T Y D S + G L GDST +Q+ ++ +LS ++ +L+Q Sbjct: 301 LSNALKTMTAY-------DKDSKTAGTLQGDSTAVNLQSAMRRLLSGPGGEGGAFTSLSQ 353 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLST 400 +GI DG L++D KL ALK D + D + G+ + + L+T Sbjct: 354 MGIAFQT-DGTLKIDDTKLDKALK-DPESMSKFFTADVADANQDGLAVRMKDFTSGLLAT 411 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 G + + L + T D + R+ A AR + Q+++LD M SL S +Y++QQ Sbjct: 412 GGTFSTKDETLKNALKRNTADQERQTARVTAYEARVRAQYSRLDTQMASLKSLDTYVSQQ 471 Query: 461 FENNSNS 467 + S Sbjct: 472 VAAWNKS 478 >UniRef50_Q2L175 Flagellar hook-associated protein 2 n=6 Tax=Bordetella RepID=Q2L175_BORA1 Length = 459 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 168/472 (35%), Positives = 261/472 (55%), Gaps = 22/472 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISSLG SGL L LD L A++ L I+NQQSS+ ++SA+G ++SA+ Q A Sbjct: 1 MATISSLG-SSGLPLQETLDKLQEAEERRLKLITNQQSSYQTRVSAFGKIQSAVEALQKA 59 Query: 61 NTALSK-ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + T+ + + TA A+AG Y I V+ LA AQ+L ++ Sbjct: 60 AANLGDMGSTSTLTTKVTGNDGVAVATANGAMAGTYNIKVSKLATAQSLQSQAFNSRIDN 119 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-GVSASIINVGNGEYRL 178 + +T G + +T+ +++SL GI +IN A G+SA+I+N G G+Y L Sbjct: 120 M--GTGGVITFTVDGKEKNLTL---GSDTSLGGITKSINGDDALGLSATIVNDGQGKYYL 174 Query: 179 SVTSNDTGLDNAMT-LSVSGDDALQSFMGYDASA-SSNGMEVSVAAQNAQLTVNNVAIEN 236 VTS G A+T ++V+G++ L S + YDASA ++ M+ VA +NA+L++N + + + Sbjct: 175 MVTSKSEGEKAAVTKIAVTGNNELASALNYDASAPDTSSMKQMVAGKNAELSINGIPVVS 234 Query: 237 SSNTISDALENITLNLNDVTTGN---QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 +N ++ A++ +TL L VT N T+TI QD SK ++ +V AYNSL T + LT Sbjct: 235 QTNAVTTAIDGVTLTLTAVTPENGAGSTVTIAQDNSKITPLVQAFVTAYNSLQTTIADLT 294 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 + + AL GD R+IQ+ + + L S +TL Q+GIT+DP G Sbjct: 295 AFNV-------DKQTQSALTGDGATRSIQSSIAAALRVVTGEGSVQTLGQLGITSDPKTG 347 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 L+LD DKL AL ++ + + K G+ + + L +G IK+ TDG+ K Sbjct: 348 ALKLDNDKLIKALNENPADAMRVFT--SKDNGLAARVSAATDKILGDSGTIKSQTDGLEK 405 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 T+ L K Y + S +I+A +A Y+ QF +LD L++ L TS+YL+QQF + S Sbjct: 406 TIASLKKQYESTSTQIEATMANYRNQFVKLDALVSQLKVTSNYLSQQFASLS 457 >UniRef50_A1U3U6 Flagellar hook-associated 2 domain protein n=3 Tax=Marinobacter RepID=A1U3U6_MARAV Length = 657 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 127/413 (30%), Positives = 209/413 (50%), Gaps = 22/413 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+IS+LG+GSG+ S ++D L A++A + + +SAYGTLKSA+T + Sbjct: 1 MANISALGIGSGVLNSDLVDQLVEAERAPTENRLDTRTQKAELLISAYGTLKSAITELRL 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 LS D A S TSS S T A G Y ++V LAQ+Q+L + T D Sbjct: 61 PMRQLSAPDNLKAFSATSSNEDVSVTVDSTKASRGTYNVNVLSLAQSQSLASSTFADRDS 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 T++ TI G +TID +N++L G+ D IN A GVSA +I+ G+G +RL Sbjct: 121 TSV--GTGSFTISSGDKSATLTID--GSNNTLQGLADEINEAGIGVSAGVIDTGSG-FRL 175 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQS----FMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 ++S +TG NA+++SV+ DD + + ++ M+ ++AA++A++ +N + I Sbjct: 176 VLSSEETGEANAISVSVTDDDGNNDDAAGLSQFVFNDTTQNMQETIAAKDARVEINGIEI 235 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 S+N+ +D ++ ++ T+ + QD + +V +N+L T L+ Sbjct: 236 TRSTNSFTDVIDGLSFEAKAEGV-TSTIKVEQDFGAVADRVGAFVEKFNALQTTIKGLSG 294 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPS 351 + ++++ G L GD+T+R+IQ QL+++L V +S +TLA +GITTD Sbjct: 295 F-------NAETGQGGILSGDTTIRSIQAQLRNVLGRVVPGLENASIRTLADVGITTDYE 347 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 G L D K LKK+ V AL G+ + + + I Sbjct: 348 TGGLSFDRAKFEEQLKKNPDDVTALFAEQGRTSSADVEFLGSGSGTTRGNYAI 400 Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + +T + GI+ A TD +S+ L ++ ++ DRI + R QFT D L++ LN Sbjct: 577 NLVTDIVGADGILDAKTDSLSRDLERIQEERIRLEDRIASYRERLVSQFTAADSLISQLN 636 Query: 452 STSSYLTQQFENNS 465 ST YLTQQ + Sbjct: 637 STGDYLTQQLAALA 650 >UniRef50_B1YLI5 Flagellar hook-associated 2 domain protein n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLI5_EXIS2 Length = 520 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 115/530 (21%), Positives = 202/530 (38%), Gaps = 77/530 (14%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I G+ SG+D +++ L ++A + +S ++ + T + AY + L +TA Sbjct: 1 MAGIRLSGLASGIDTETMIKQLMQVERAPVDRLSQKKQTLTWQRDAYREMNRGLLDLRTA 60 Query: 61 NTA-LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDDTK 118 + L + + T+T+S + T + A AG TI + LA A ++T TT+ + Sbjct: 61 ASDMLLSKNYIAKTATSSDASKVVVTASPGATAGSVTIDEIGQLASAASVTMTTTKGSSS 120 Query: 119 TAIATSDSKLTIQQG------------GDKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 + + G G TI + A LS + AIN + Sbjct: 121 DTTLAASGMFNVTNGKVNIQINSFAADGKAISETISLDATQK-LSDLTSAINGKTSLGMN 179 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 ++ N G +L +T +TG N ++ DA ++ G +NA+ Sbjct: 180 AVYNDITG--KLVLTKTNTGKLNPNGADITVIDANLGTEKVNSQIDGVG----QDGKNAK 233 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T+ +E +NT + +T+ LN +T T+ DT +IK +V+ YN LI Sbjct: 234 YTIGGQELEQRTNTFTQ--NGLTITLNGTSTTATTINTKLDTQANFDSIKKFVDKYNDLI 291 Query: 287 DTFSSLTK-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML 329 D + + + + + + +GAL DS LR +S + Sbjct: 292 DKMNKKVREEKYRDFQPLTDTQRKELSEDEVKKWEEKAMSGALKNDSFLREGMDAFRSAI 351 Query: 330 SNTVSSS----------SYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGAL 376 S+ + + ++QIGIT+ GKL++D KL L++ GV L Sbjct: 352 SSKIDTGYSYTVDSKSVGLNYMSQIGITSTSDFRDGGKLKIDEAKLKKMLEEQPEGVYKL 411 Query: 377 IVGDGKK-----------------------TGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 D + G TT+ ++ G + T + K Sbjct: 412 FTADAPEPVKNPDGSITPNPGGLDGFVRQIQGFATTMRDKISKVAGLDGAVAT-TYRLGK 470 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 +L L K D++ + Y +F ++ M NS S+ L Sbjct: 471 SLADLDKSMVTWEDKLKTKENAYYRRFAAMEQAMNQANSQSATLASYLGQ 520 >UniRef50_Q5QZT2 Flagellar capping protein n=2 Tax=Idiomarina RepID=Q5QZT2_IDILO Length = 463 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 116/477 (24%), Positives = 218/477 (45%), Gaps = 35/477 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M +SSLG SGLDL I+ + A++ + Q+ +LSA G +KS L+ Q Sbjct: 1 MPLVSSLGARSGLDLEGIVSATLNAERVPKQNRLDQQEGRLQVELSAVGEMKSVLSKLQE 60 Query: 60 ANTALSKADLFSATSTTS----STTAFSATTAGNAIAGKYTISVTHLAQAQTLTT-RTTR 114 A LS +LFSA + S + + +A G + ISVT LA+ + Sbjct: 61 AAEKLSSGELFSAMKASVKQPESGDVITVESTEDAGVGNFDISVTQLAKGSRAVSADGAF 120 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVG 172 +++ + T+ LT G + + I A SSL IR A+N++ GV+A IIN G Sbjct: 121 ANSEDEVNTNAGSLTFGAGDESFTLNI---EAGSSLEDIRKAVNSSQDNFGVTADIINTG 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 E +L SN +G N +T++ + S A + + A +A + ++ Sbjct: 178 T-EAKLIFRSNVSGEGNDLTVTNDNAEFDAISTQANGGGAGGMSIAAADKATDAIIEIDG 236 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + +N +N D ++ T+ + +T L+I +D + +I +V AYN + + Sbjct: 237 IQAKNDTNIFEDVIQGSTITAVKESEDAETAKLSIARDEDGVKKSIDAFVKAYNGAVASL 296 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 + + N L GD+T+R ++ QL ++L++T +TL +G D Sbjct: 297 NEI-------------GGENSMLQGDATVRNLKGQLNNVLTSTFGEGG-QTLFDLGFGLD 342 Query: 350 PSDGKLELDA--DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 +GKLE + + LK + + + ++ G + G+ + + S L ++ G ++ Sbjct: 343 -KEGKLEAENPVTSFSEVLKNNPAALESVFGG---ENGLASRMDSFLDGYVGGGGSLELR 398 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 D ++++L+++ + R+++ + ++ LD L+ L S + ++ Q N Sbjct: 399 KDTINQSLDRVAESREDLKLRMESMEETLRAKYQALDSLVGQLQSRGNAVSAQLSNL 455 >UniRef50_A6TLE2 Flagellar hook-associated 2 domain protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE2_ALKMQ Length = 558 Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 101/564 (17%), Positives = 199/564 (35%), Gaps = 112/564 (19%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF---QTA 60 + G+ SG+D +++ L A++ + Q+ + + AY + + F Sbjct: 1 MRIGGIASGMDTEQMVNDLMRAERMRMDRFFQQEQTVKWRQEAYNDVNKTMANFILDTRK 60 Query: 61 NTALSKADL-------------FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQT 107 L+ + +T ++ +T NA++G + + V LA+ + Sbjct: 61 AFGLNTTSNTGSIQNHSAKSFDWVKQATGTNENIVKSTATANAMSGSHKVEVQQLAEVAS 120 Query: 108 LTTRTTRDDTKTAIATS---DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-- 162 ++T ++ + ++T+ I I + ++S + INNA A Sbjct: 121 VSTVDLKEAAVVDDSGKFIQGGEITVTAKDGSKTIEIT---TSMTMSDLVREINNATADA 177 Query: 163 --------GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM-----GYDA 209 G+ A+ + ++ +T+ ++G + + ++ D D Sbjct: 178 GDSEGKSLGLRAAY---DSSLGQMMITTRESGEEQTIKVTYDEDGLSSKMFKVKTDDADM 234 Query: 210 SASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTS 269 ++ NA++ N ++ ++N S + I L L V+ T+ + D Sbjct: 235 PIPGTNPFEDISGTNAKILFNGDKVDKATNNFS--IYGINLQLQSVSDIEVTINVDTDVD 292 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGAL 312 I D+VN+YN L+DT + T T D A + S +G L Sbjct: 293 GIFNQISDFVNSYNELLDTMNGATGEKHYRDFPPLTKEQKEGMTEKDIEAWEEKSKSGLL 352 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSS-----------SYKTLAQIGITTD--PSDGKLELDA 359 D L ++S L V+S Y + Q+GITT S GKLE++ Sbjct: 353 KNDEVLTRTSQSMRSSLYQDVNSGIDEDGNQIKLSGYSHITQVGITTGNYQSGGKLEINE 412 Query: 360 DKLTAALKKDASGVGALIVGD--------------------GKKTGITTTIGSNLTSWLS 399 +KL AA+ ++ GV L G I + + + + Sbjct: 413 EKLRAAINENPEGVMDLFFKSPSPLPKDATAEQKKQHKSETGLVQRIYDDMTAGMKEVIR 472 Query: 400 TTG--------------------IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 +G ++ + K L + + + + RY +Q Sbjct: 473 HSGPGEDSSLYRNVQSNMLIDFVTEHSSISRLDKELTTVNQRIAREEQILARREERYWQQ 532 Query: 440 FTQLDVLMTSLNSTSSYLTQQFEN 463 FT ++ M+ +N S +L Q Sbjct: 533 FTAMEKAMSQMNQQSDWLMAQMYG 556 >UniRef50_B8FTT2 Flagellar hook-associated 2 domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTT2_DESHD Length = 510 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 105/517 (20%), Positives = 218/517 (42%), Gaps = 62/517 (11%) Query: 3 SISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ--T 59 +I + G+ GSG+D+ ++ + +A++ + +++ K + Y T+ + + +F+ T Sbjct: 2 AIRTYGLSGSGMDVDQMVKDMMSARREQYDKLWQKKTQLEWKKTDYNTMYNTIQSFRNTT 61 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT------- 112 A + T+S+ +AT +A +I+V LAQ +T+ Sbjct: 62 AFNYRLSSTTIPKIVTSSAEGIVTATANADAANVSRSITVGQLAQGANVTSTGKITEEGR 121 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T+D + + + G TI + + S+ +N + + AS Sbjct: 122 TKDSLMSQFGLEEGTFAVVLGDGSTSKTIQVDTS-KSIYDFVSDLNKSGLKIRASYDATL 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM-----------GYDASASSNGMEVSVA 221 + R ++++ TG D A+ + + + + F+ G + + ++ Sbjct: 181 D---RFNISTTGTGEDVAIDFTGTTSEKGKEFLEKLQLHVVKEDGGGGTTTEPITSEAIK 237 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 ++A++ ++ I +S NT + +T L TG+ + ++ D KA + +KD+V+ Sbjct: 238 GKDAEVVLDGATITHSGNTFT--AFGVTYTLKA--TGDANIHVSADNDKAVSVVKDFVDQ 293 Query: 282 YNSLIDTFSS-----------------LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 YN+L++T +S + + + +G L DSTL+++ + Sbjct: 294 YNALLETINSELNEAKYKSYMPLTNEMKGQLGDSQITQWEEMARSGLLRNDSTLQSLIYK 353 Query: 325 LKSMLSNTVSS--SSYKTLAQIGITTDPS---DGKLELDADKLTAALKKDASGVGALIVG 379 L++ ++ VS Y +L+ IG+TT GKL LD +L AL+ D V L Sbjct: 354 LRNDIATPVSGVEGKYNSLSAIGVTTGKDYLEGGKLYLDETELKKALEADPDIVNKLFGS 413 Query: 380 DGKKTGIT----------TTIGSNLTSWLSTTGIIKAATDG-VSKTLNKLTKDYNAASDR 428 G+ + N+ TG IK T+ ++K + + +DR Sbjct: 414 SGEDRNSQGAAVRIYDSLKSTMDNIKETAGITGTIKGDTESTLAKQIRDYEDSLDRMNDR 473 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + RY +QF +++ ++ L+ SS+L F + + Sbjct: 474 LSQMEERYYKQFNAMELALSKLSQQSSWLANMFSSGN 510 >UniRef50_Q9K3C5 B-type flagellar hook-associated protein 2 n=4 Tax=Pseudomonas aeruginosa RepID=FLID2_PSEAE Length = 474 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 133/479 (27%), Positives = 231/479 (48%), Gaps = 28/479 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA IS GVGS D + +++ + + A ++ + + T +L+A G KSA++ FQT Sbjct: 1 MAGISI-GVGS-TDYTDLVNKMVNLEGAAKTNQLATLEKTTTTRLTALGQFKSAISAFQT 58 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A TAL+ +F A + +S+ A+ +A+AG Y I V LA + + + D Sbjct: 59 ALTALNSNAVFMARTAKSSNEDILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPAN 118 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEY 176 + +++ GD I + ++N++L+G+RDAIN A AGVSA+II +G Sbjct: 119 AKFNSGTLNISV---GDTKLPAITVDSSNNTLAGMRDAINQAGKEAGVSATIITDNSGS- 174 Query: 177 RLSVTSNDTGLDNAMTL----SVSGDDALQSFMGYDASA-----SSNGMEVSVAAQNAQL 227 RL ++S TG + + SG + S + +D + A N ++ Sbjct: 175 RLVLSSTKTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLSDGAAAGYVTKAANGEI 234 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAYNSL 285 TV+ + +SN++SD ++ ++ ++ VT TLT+++D + + +K +V AYN+L Sbjct: 235 TVDGLKRSIASNSVSDVIDGVSFDVKAVTEAGKPITLTVSRDDAGVKDNVKKFVEAYNTL 294 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 + T T V + + GALLGD+++R + ++S L + + S + LA +G Sbjct: 295 TKFINEQTVVTKVGEDKNPVT---GALLGDASVRALVNTMRSELIASNENGSVRNLAALG 351 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 ITT DG LE+D KL A+ D GV + GD TG+ +G + + GI+ Sbjct: 352 ITT-TKDGTLEIDEKKLDKAISADFEGVASYFTGD---TGLAKRLGDKMKPYTDAQGILD 407 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 T + KTL+ + + R+ A + QF L + + +T + Sbjct: 408 QRTTTLQKTLSNVDTQKADLAKRLAALQEKLTTQFNLLSAMQDEMTKRQKSITDNLASL 466 >UniRef50_Q221C0 Flagellar hook-associated 2-like n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221C0_RHOFD Length = 495 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 133/504 (26%), Positives = 237/504 (47%), Gaps = 48/504 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ISS G+GSGLD++SI+ L A +K L ++ + ++ ++SA+G ++S Sbjct: 1 MATISSTGIGSGLDVNSIVSQLVALEKTPLKTLALKATNTQNQISAFGEIQSQFAALTDV 60 Query: 61 NTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +S A + A + +SS +A + T G A A +++ V LA++Q+ ++ T Sbjct: 61 ASRISVASTWGARNASSSNTSAATITATGTANATSFSLDVDQLARSQSGSSAAVAPGTMP 120 Query: 120 AIATSDSKL-TIQQGGDKDP------ITIDISAANSSLSGIRDAINNAKAGVSASIINVG 172 T +L T GG + + + A + ++S I IN A AGV A++ N G Sbjct: 121 GAGTLTLQLGTWTAGGAAFTPGAAASVNVTVLATD-TISDIASKINGANAGVVATVFNDG 179 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSF----------------MGYDASASSNGM 216 E RL + S TG ++V+ D + + AS + Sbjct: 180 TNE-RLLLQSKTTGAAAGFRMTVADADTTNNDNAGLSRLSFDPATVDPLTGLASGMATAG 238 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT----------GNQTLTITQ 266 AQ+A+ +N +A+ +++NT++D + +T+ L TT T+ I++ Sbjct: 239 IPVQYAQDAKARINGLAVTSATNTLTDNIPGVTIKLVATTTTGYGLPGEVKSPLTMAISE 298 Query: 267 DTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK 326 D + A + D+V AYN L + + LTKY D+ + + G GDS++ +Q L+ Sbjct: 299 DVTPAVKNVSDFVTAYNKLNKSLTDLTKY-------DAATKTAGLFQGDSSVVGLQNILR 351 Query: 327 SMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK---K 383 +ML + +S + L+ +G+ DG L ++ KL+AA + + + L D K Sbjct: 352 NMLGSASLGASSQRLSDVGLE-RQLDGSLVINTAKLSAA-ANNGTTLQQLFTNDNKDPLT 409 Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 G S+ G +K + + K L+ TK+ +DR R ++Q++ L Sbjct: 410 NGFALKFRDLGRGVASSGGSVKNKAEALQKNLDNNTKEQTKVNDRAALFETRLRKQYSAL 469 Query: 444 DVLMTSLNSTSSYLTQQFENNSNS 467 D M LN+ ++Y+TQQ + S Sbjct: 470 DAQMAQLNALNAYVTQQVATWNKS 493 >UniRef50_D1BD21 Flagellar capping protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BD21_SANKS Length = 460 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 104/464 (22%), Positives = 200/464 (43%), Gaps = 12/464 (2%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S++ G+ SGL S +++ L + T + + ++ A ++A L + +++ Sbjct: 2 SLAVDGMISGLKTSELINQLMQVEAMPQTMLKQKVTTTQAFITALQGLNTRVSSLADVAK 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 +K + + AT+ +SS T+ TT+ + + +V LA+ QT + D Sbjct: 62 TAAKPESWQATTASSSATSVKVTTSAGSQPSTLSFTVDRLAKPQTSVSAAVTDLDSYFPD 121 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSS-LSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 LTI G P + + A + L+G+ +N A +G++AS++ V E RL +T Sbjct: 122 GVPENLTIVSGPASKPTLVTVDLAGVTDLAGLATKLNAAGSGITASVVKVSATESRLQIT 181 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV-NNVAIENSSNT 240 TG+D A + G + + + V A +AQ+++ + + ++SNT Sbjct: 182 GKSTGVDGAFDIHR-GKVTAEDLAAGASDLVVDRSTALVQAVDAQISLWDGTPVTSASNT 240 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 SD L+ ++ ++ V T+T ++ + D V + ++ +S T T + Sbjct: 241 FSDVLKGVSFTVSAVEATPVTVTTVRNDAALTKLASDLVGSVGVVLSEIASRTSTTTTTS 300 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 + G L GDS R I + + LS V + +++GIT + DG D Sbjct: 301 TDGRTVIAGGVLSGDSATRGIGQSITTALSYPVDG---ISPSEVGITLN-KDGTFTFDQA 356 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 K T AL KD V ++ G G++ + S+ G + LT+ Sbjct: 357 KFTEALGKDPEKVQRVVSGLGERVADASKRISD-----PIDGSLTLKVKSQESFSKGLTE 411 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + R++ + + + + L+V ++ L S SS+L Q + Sbjct: 412 QVSDWDRRLETRRSGLQRTYAALEVTLSGLQSQSSWLAGQIGSL 455 >UniRef50_Q15R99 Flagellar hook-associated 2-like n=3 Tax=Alteromonadales RepID=Q15R99_PSEA6 Length = 486 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 127/494 (25%), Positives = 230/494 (46%), Gaps = 43/494 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI SLGVGSGLDL +++ L A++ + +Q+ S+ A++S+ GTLKS + F + Sbjct: 2 SIQSLGVGSGLDLEALVSQLLEAERTPKQARLDSQEESYDAEISSIGTLKSKMKEFLDSV 61 Query: 62 TALSKADLFSA-----TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR----T 112 L + + + F+A + +A+ Y I+VT LA + T Sbjct: 62 DELRSDANLKGREPTIKNPSENIEPFTAEASNSAVEADYAIAVTQLANGSRIETDNAVDG 121 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIIN 170 T +++ LT + G D +I+++A +L + AIN++ GV +SII+ Sbjct: 122 GFSSTSDSVSAQAGSLTFKIGATTDTFSINVTAG-MTLQQLSSAINSSDDNFGVRSSIID 180 Query: 171 VGN--GEYRLSVTSNDTGLDNAMTLSVSGD-DALQSFMGYDASASSNGMEVSVAAQNAQL 227 G G +L TS+ G N + + + L D++ ++ ++ +AQN++ Sbjct: 181 TGTASGGAKLVFTSSVQGEGNDLMIVNDNNIADLNRVATTDSTETAAYLDPVKSAQNSKA 240 Query: 228 TVNNVAIENSSNTISDALENITLNLND--------VTTGNQTLTITQDTSKAQTAIKDWV 279 T++ +A+E+S+ + +EN++ ++ +T L I D + I+D+V Sbjct: 241 TIDGIAVESSTTEFENVIENVSFTVSQLSELDEDGITPKTSNLKIGFDAEGLEGKIRDFV 300 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 + +N+L ++LT+Y A D D GAL GDS +R IQ L +M+S VSSS Sbjct: 301 DNFNALNTQITTLTRYGASDLEED------GALAGDSMIRGIQQGLSNMISANVSSSGLG 354 Query: 340 TLAQIGITTDPSDGKLELD----------ADKLTAALKKDASGVGALIVGDGKKTGITTT 389 TL Q+GI + DG LE+ D+L AL+ + AL + G+ Sbjct: 355 TLFQLGIEFN-EDGDLEIGSSDKFGFGSGEDRLKDALEDSFDDIAALFA--DSENGVAVR 411 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + + + + +G++ + V ++L + R+ + ++++ LD + Sbjct: 412 MHDYIEQYTNYSGLLTSREKSVQDQKDQLADEREQFELRMASTEQILRDKYLNLDQTVAQ 471 Query: 450 LNSTSSYLTQQFEN 463 LN T S L + Sbjct: 472 LNQTGSALLASLGS 485 >UniRef50_A0Z367 Flagellar capping protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z367_9GAMM Length = 493 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 152/493 (30%), Positives = 270/493 (54%), Gaps = 41/493 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+ G+GSG+D+ ++ L A++ + ++ T +SA+GT K +L+ Q++ Sbjct: 2 VSATGLGSGIDIEGLVTGLVNAERVPAEQRLVQREVKVTTLVSAFGTAKGSLSDLQSSIA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGK-YTISVTHLAQAQTLTTRTTRDDTKT-- 119 L +S S TSS ++ A +A ++ Y + VT+LA+ Q+ + Sbjct: 62 ELKSLTTYSKISATSSASSKVAVSATSSAQAASYQVGVTNLAETQSFASTAYASTATFGT 121 Query: 120 ------------AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 T D+ T K + + I+++N++LSGIRDAIN A AGVSAS Sbjct: 122 GTLTLTLGTPTYNGTTPDTYDTFTADSTKTAVNVSITSSNNTLSGIRDAINTADAGVSAS 181 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSG---------DDALQSFMGYDASASSNGMEV 218 +I G +RL +T+++TG+ N++ ++ G +L SF A+ +S+G++ Sbjct: 182 LIKDGTN-FRLLLTTDETGVANSVQITSGGISADVGGADVASLSSFDFDTATTTSDGLQQ 240 Query: 219 SVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 + AA+NA ++N +A + ++SNT++DA+ +TL L T + ++T++ + +AI Sbjct: 241 TQAAENAAFSINGLAGLTSASNTVTDAVTGVTLTLKATTDTDASITVSANQGAITSAIDK 300 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 +V YN ID F+ LT Y ++ + + GAL GD + R+I + ++S ++NTV Sbjct: 301 FVAGYNGYIDIFNQLTDY-------NATAKTRGALQGDFSARSIMSNVRSAIANTVPGLD 353 Query: 336 SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKK----TGITTTIG 391 SY++LA IGI TD G+L +D+ KL AAL D V + TG+ + Sbjct: 354 GSYRSLADIGIVTDAK-GQLSVDSTKLNAALAADPDAVTGMFADTTYNGTAVTGVAARLD 412 Query: 392 SNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLN 451 + LT +L++ GI+++ TD +SK+L+++ D + R+D+ ARY+ QF +D L++++ Sbjct: 413 TILTDYLASDGILESRTDSLSKSLSRINDDRAVVARRLDSLEARYRAQFNAMDSLLSNIT 472 Query: 452 STSSYLTQQFENN 464 +T +LTQQ +N Sbjct: 473 ATGDFLTQQLKNL 485 >UniRef50_Q3SII3 Flagellar hook-associated protein 2 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII3_THIDA Length = 665 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 142/422 (33%), Positives = 224/422 (53%), Gaps = 32/422 (7%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 S LD+SSI+ L A ++ LT ++ +++ + A+LSAYG++K A+++FQ A AL+ Sbjct: 5 SSVLDISSIVSQLMAVERRPLTKLAAREAGYQARLSAYGSVKGAVSSFQAALQALNSPSK 64 Query: 70 FSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 F + + T S + FSA+ A+ G Y+I V LAQ Q L + + + + Sbjct: 65 FQSVTATASDSAVFSASATSTAVPGTYSIEVATLAQPQKLVAAGQASSSAAIGGGTATTV 124 Query: 129 TIQQGGDKD-------------------PITIDISAANSSLSGIRDAINNAKAGVSASII 169 T G +I I ++N+SL GIRDAIN AK GV+A+I+ Sbjct: 125 TFDFGTISGGTLANGVYSGASFVSNGDGTKSITIDSSNNSLLGIRDAINAAKIGVAATIV 184 Query: 170 NVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 N G+G YRL++ ++ G+D ++ +SVSGD A+ S + +D + + AAQNA L Sbjct: 185 NDGSGSPYRLALAADHNGVDQSLKISVSGDAAIDSLLAHDPGGV-QNLTETAAAQNANLK 243 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 +N V + +SNTISDA+E +TLNLN VT+ +LT+ +DT+ + +I +V AYN L T Sbjct: 244 INGVTVTKTSNTISDAVEGVTLNLNKVTSSPASLTVARDTNSIKASINSFVKAYNELSGT 303 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGI 346 +++ Y D+ + L GD+T+R++QTQL++M+ V KTLA IGI Sbjct: 304 LKNVSAY-------DAAAKKGAILQGDATVRSLQTQLRAMIGAPVEGAPGDLKTLASIGI 356 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 T DG L +D KL+ A+ + +L G T + S S + + + Sbjct: 357 TFQ-KDGTLGVDQGKLSTAIADHFDEIASLFTTVGSSTDSLVSFSSGTRSTKAGSYALDV 415 Query: 407 AT 408 Sbjct: 416 TQ 417 Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 45/82 (54%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 G T+ S ++ L + II A TDG+ +++ + K + R+ RY+ QF Sbjct: 578 SQGYAATLNSWASAVLDSDSIISARTDGIDRSIKDVAKRRSEFEARLVNMEKRYRAQFVA 637 Query: 443 LDVLMTSLNSTSSYLTQQFENN 464 LD ++ S+N+TS+YLTQQ N Sbjct: 638 LDSMLASMNNTSNYLTQQLANL 659 Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 5/150 (3%) Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDS 126 A LF+ +++ + ++ + AG Y + VT +A +T A S+ Sbjct: 383 ASLFTTVGSSTDSLVSFSSGTRSTKAGSYALDVTQVATQGKTVGKTI-SVPLVIAAGSND 441 Query: 127 KLTIQQGGDKDPITI---DISAANSSLSGIRDAINNAKAGVSASI-INVGNGEYRLSVTS 182 L + G + + + A + + ++ IN A A A + + V +L++TS Sbjct: 442 TLNLSIDGVGASVELSPGTYTTAGALAAELQTKINGAAALSGAGVSVAVSESAGKLTITS 501 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 G + + +S + G S Sbjct: 502 VKYGSGSTVLISGGTAEVSLGLDGDAPSDG 531 >UniRef50_A9BQ50 Flagellar hook-associated 2 domain protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BQ50_DELAS Length = 473 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 142/489 (29%), Positives = 233/489 (47%), Gaps = 39/489 (7%) Query: 1 MASISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA++SS G+ GSGLD +++ L A Q+ +L P+ + S +K+S +G +KS ++T Q Sbjct: 1 MATLSSAGISGSGLD-ETMIAKLVALQRQSLVPLQQKASVLDSKISTFGQIKSLMSTLQD 59 Query: 60 ANTALSKADLFSATSTTSSTTAFSAT-TAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A T+L+ AD + T+ ++ +A + + T NA+ G ISV LA++Q++ T DT+ Sbjct: 60 AATSLANADTWRLTNAATTNSAVAVSVTDANALPGSSVISVNKLARSQSVATGIMPKDTQ 119 Query: 119 TAIATSDSKL--------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 + G I I AA + L + AIN+ AGV AS++ Sbjct: 120 FGAGKLTITMGAWNANGTQFSNPGTPLDIDI---AAGAKLEDVVQAINSKGAGVVASVLK 176 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 GE RL + S TG D+ T+ SGD +L + A+ S + AQNA+LTVN Sbjct: 177 DAQGE-RLVLRSRSTGADSGFTVDASGDSSLSALAFNGAATSGSVA---QYAQNAELTVN 232 Query: 231 NVAIENSSNTISDALENITLNLNDVT--TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 + +++++N L + + +N T T+T++ DT + I+ +++AYN+L D Sbjct: 233 GITVQSTTNEFKQTLPGLNITVNQETAPATPVTVTVSSDTDGMKKKIQAFMDAYNALNDA 292 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGI 346 SS TKY D++S G L GDST + L+S++S TV + K L+ +GI Sbjct: 293 LSSSTKY-------DAESKVAGLLQGDSTTVGMTNSLRSVVSGTVDGGADTLKRLSDMGI 345 Query: 347 TTDPSD----GKLELDADKLTAALKKDASGVGALIV-----GDGKKTGITTTIGSNLTSW 397 G D KL AALK D + + G G+ + Sbjct: 346 QIQKGGKLAYGTTASDKTKLDAALK-DPESMSKMFAAVGTDGQPNTQGLAARMKDFTRKA 404 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 L G + + + K + +D+ D+ R +EQ+ LD M+ ++ S+Y+ Sbjct: 405 LEFDGTFDTKSKSLQELKKSNGKSQDRINDQADSLEKRLREQYASLDKKMSGYSALSAYM 464 Query: 458 TQQFENNSN 466 QQ + Sbjct: 465 NQQVSQWNK 473 >UniRef50_C1DCR5 Flagellar hook-associated 2 domain protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCR5_LARHH Length = 423 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 208/461 (45%), Gaps = 42/461 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS GVGSGLDL SI++ L A +K L + Q+ ++S G +K+AL+ + + Sbjct: 2 GISSAGVGSGLDLESIINGLMAIEKRPLQKLEQQKKDLDTQVSDLGKIKNALSNLKEKSD 61 Query: 63 ALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 A++K+D F+ +++S T T G+++AG Y ISV+++AQ++ + + Sbjct: 62 AITKSDFFNTIKASSSDDTIGRVTVNGSSVAGTYNISVSNIAQSRV---DSLDVSVFSQD 118 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSV 180 A L + IT+ ++ S+ + IN + +SAS++ G ++ Sbjct: 119 ADGKLLLPEEITVAGTKITLGVAPVAMSVEDLVGKINAETGSKLSASLVK-SAGGDKIVF 177 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 T+ +G + ++ S Q+A +T+N V I +++N Sbjct: 178 TAKHSGAAPGYS------------DADFNFGVGVTVQNSQLGQDAVVTINGVEIRSATNK 225 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 I DA+ I+L+++ G ++++ QD ++D+VNAYN ++ + ++ Sbjct: 226 IEDAIPGISLSISK--PGIFSVSVEQDNDAISKGVEDYVNAYNEVVGLTAQMS------- 276 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 G+ GD +R+I+ L + ++ LA +G+ DGKL+ Sbjct: 277 --------TGSFKGDGLMRSIKNDLYLTMYQPSGATGLAPLASLGVEIGT-DGKLKFTKS 327 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 K A K D V +V K + S + S LS G++ + + + ++ Sbjct: 328 KFEKAFKDDPDIVKQNLVAVSKG------MKSTVDSMLSGDGLVSGRQEVLDGRIRNNSR 381 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ + R++ A ++Q+T LDV + + + S L Sbjct: 382 QQDSMNTRLEKTEAALRKQYTALDVALAKMQQSLSRLQSML 422 >UniRef50_C6J2J7 Flagellar hook-associated protein 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2J7_9BACL Length = 466 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 126/484 (26%), Positives = 223/484 (46%), Gaps = 40/484 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S G+ SGLD S+++ L +K T + +++++ + + + + L T + A T Sbjct: 2 GVSLTGLASGLDTSTLITQLMNLEKVPYTNLESKKTAISNNKTIFNNINLKLKTLRDAAT 61 Query: 63 ALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR------D 115 ALS F+ +++T+S +T +AT NAI G Y++ V LA+ Q T + + Sbjct: 62 ALSDLGAFNVSSATSSDSTKLTATGGENAINGSYSVKVIQLAKQQVNATAGMQVTDANGE 121 Query: 116 DTKTAIATSDSKLTIQQGGDKDPIT---IDISAANSSLSGIRDAINNAKAGVSASIINVG 172 D + A +I+ GG + + +LS I IN V AS++ Sbjct: 122 DIEFTSAALAEAKSIKIGGQSITLNDDDFTGKTYSEALSLIASQINKQFGDVQASVVQRS 181 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 G L +++ +TG ++ S M VAAQ A L VNN+ Sbjct: 182 EGVKSLVISAKETGKTVDIS-----------------GTGSFKMWEKVAAQPAILEVNNL 224 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 ++ ++SNT+++A+ +TL L + + QDT K + + D+V AYN ++ Sbjct: 225 SVTSTSNTVANAIPGVTLQLL-AENSTVNVEVKQDTDKLASKVDDFVKAYNDVVKLIREN 283 Query: 293 TKYTAVDAGADSQ-SSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-YKTLAQIGITTDP 350 TK G+D ++ L GDSTLR +Q++L ++++ V SS K L+ IG+ D Sbjct: 284 TKKIENTKGSDGSYTNFKTNLQGDSTLRDLQSELYDIVNSVVGSSDNLKLLSDIGLEIDK 343 Query: 351 S-------DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGI 403 G+L D DK L ++ V L G+ + L W ST G+ Sbjct: 344 GVTSASLMTGELSFDKDKFKKKLAENPEAVAELFQGENGLGTLA---KDRLYGWTSTNGL 400 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 I G+ ++ +T + ++R+ + +QF+QL+V +++L + S+L Q + Sbjct: 401 IAMRIQGLQSDIDFITDQMESMNERLKLKEEALNKQFSQLEVALSNLQNQQSWLAGQLNS 460 Query: 464 NSNS 467 +S Sbjct: 461 LMSS 464 >UniRef50_B0K3A2 Flagellar hook-associated 2 domain protein n=8 Tax=Thermoanaerobacterales RepID=B0K3A2_THEPX Length = 519 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 122/512 (23%), Positives = 204/512 (39%), Gaps = 56/512 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANT 62 + G+ +GLD SI+ L A L + Q+ + + + S L + + Sbjct: 15 LRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVF 74 Query: 63 ALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTT---------RT 112 L F A + TSS + +AT NA+ G YTISV+ LAQA T + + Sbjct: 75 KLKLQGTFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNS 134 Query: 113 TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIIN 170 T A+ + S +T+ G I +++ I AIN GVSA+ Sbjct: 135 DGTYTYNALNNTGSDITLYLKGLDGNDKEIIIKNGATIKDIVAAINAKTNETGVSATY-- 192 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM-EVSVAAQNAQLTV 229 G RL + SN TG ++ + S + D Q+F+ S + + Q+A T Sbjct: 193 -DPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTGGITGQDALFTF 251 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N V + +S+N ++ + I + L + TLT+ D K IK +V++YN +I Sbjct: 252 NGVQMTSSTNNVT--VAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKI 309 Query: 290 S-----------------SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 + D + + +G L D TL + +++++S+T Sbjct: 310 NAKLTEKRYYDYPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSST 369 Query: 333 VSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVG----------- 379 VS +L+ IGITT GKL +D KL A+ D V + G Sbjct: 370 VSGVG--SLSSIGITTGQWYEGGKLYIDETKLKDAIANDLDKVMKIFAGVYETDSNGNTT 427 Query: 380 ---DGKKTGITTTIGSNLTSWLSTTGIIKAATDG--VSKTLNKLTKDYNAASDRIDAQVA 434 G + T+ + + G D + + ++ ++ Sbjct: 428 LKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQRYLNDLEK 487 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 RY QFTQL++ + +NS S++L+QQ Sbjct: 488 RYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK 519 >UniRef50_B7WXZ9 Flagellar hook-associated 2 domain protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXZ9_COMTE Length = 470 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 124/481 (25%), Positives = 226/481 (46%), Gaps = 30/481 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ISS+G+GSGL++ +I+ L A + + + + + ++SA+ LKS ++ Q Sbjct: 2 GISSVGIGSGLEVETIVKQLVALESKPIAALQTKATGINTQISAFSQLKSQISNLQDQVD 61 Query: 63 ALSKADLFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+K + + T+S++T + T +A+ Y + V+ +A QT+ + + T A Sbjct: 62 KLAKPATWLGNTLTSSNSTQVTGTATSSAVQATYDVEVSQMAAGQTIGSGLVTNSTLGAG 121 Query: 122 ATSDSKLTI--------QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 + S T + G + I+A ++SL+ I IN AK VSA+++ Sbjct: 122 KLTISMGTFGTTGLTPNTKDGKDVSFEVTITAEDNSLAKIAAKINAAKGDVSATVLKDHT 181 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 GE RL + S TG+++A ++ G + + + M SV A++ +N + Sbjct: 182 GE-RLVLQSKTTGVNSAFSVKAEGAG----LQQFAYNGTDGSMTRSVDAKDTLAKINGID 236 Query: 234 IENSSNTISDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + + +N + +TL + + T +TI DT+ A+TA+K+ V +YN+L + Sbjct: 237 MASHTNVFEEVAAGVTLTVAQKSAENTAPVRITIANDTATAKTALKNLVESYNALSSALA 296 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS-SSSYKTLAQIGITTD 349 ++T Y + + + G L GDST +Q+ ++ +LS + +L+Q+GI Sbjct: 297 TMTAY-------NKDTKAAGTLQGDSTAVNLQSAMRRLLSGHGGEGGEFTSLSQMGIAFQ 349 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLSTTGIIKA 406 DG L++D KL ALK D + D + G + + L+T G Sbjct: 350 -KDGTLKIDDTKLDKALK-DPESMSKFFTADVADASQDGFAVRLKDFTSGMLATGGTFST 407 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + L + T D S R+ A AR + Q+++LD M SL + +Y+ QQ + Sbjct: 408 KDETLKNALKRNTADQERQSARVTAYEARLRAQYSRLDTQMASLKALDTYVAQQVTTWNK 467 Query: 467 S 467 S Sbjct: 468 S 468 >UniRef50_UPI000169342B flagellar capping protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169342B Length = 505 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 100/521 (19%), Positives = 192/521 (36%), Gaps = 79/521 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT--AN 61 + G SG+D+ S++ +L A + + ++ +++ + + ++Y + S L F+ Sbjct: 1 MRINGF-SGMDIDSMIANLMKAHRQPINRMNQKKTLYEWQQNSYREVNSKLVDFRNNKLL 59 Query: 62 TALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT------R 114 + + + + + S + +A +A A G TI V LA + + + + Sbjct: 60 SKYTSSSFNTLKAAVSGNASAITAKATSKAATGTITIDVESLASSSRVKGKNSQLAGRGD 119 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGN 173 + A KL + + ++ID +L+ I IN N +AGV+A Sbjct: 120 EKLADLEAAGVLKLDGETSIKINGVSIDFDPNTDTLNTIVQKINGNKEAGVTAFYNPD-- 177 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 ++S+TS TG + + + + +A++ +N V Sbjct: 178 -NGQISLTSKTTGTK-----------EISLGGSLLTGTDNLNLNEKIQGTDAKVVINGVE 225 Query: 234 IENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 SSN S + I + L+ T ++ + D + IK ++N YN ++ + Sbjct: 226 ATYSSNQFS--VNGIEVTLHAATGNQPSIVSTSLDADQIVETIKSFINDYNEVLKLLNDK 283 Query: 293 T-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 D + + +G L GD LR ++L+S ++ + Sbjct: 284 VIEERYRKFPPLTDEQKKDMKEADIKLWEEKAKSGMLKGDPILRKAISELRSAMTTPIYL 343 Query: 336 SSYK-----------TLAQIGITTDP--SDGKLEL-DADKLTAALKKDASGVGALIVGD- 380 TLA IGI T GKL L + KL L+K+ + A Sbjct: 344 GPADATSEEKAKNSITLADIGIETGKWFEGGKLTLKNEAKLRETLEKNPEKLMAFFTNRP 403 Query: 381 ----------GKKTGITTTIGSNLTSWLSTTGIIKAATD---------GVSKTLNKLTKD 421 G + ++ L G + +TD + K + +L K Sbjct: 404 SGDNPPQEQVGVFNKMVDSLKGTLKDISDKAGTSRYSTDKGSTLKDQSILGKQIAELNKK 463 Query: 422 YNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + + ++ + RY QFT ++V + LNS S L Sbjct: 464 IDQTNAKLKSIEDRYYRQFTAMEVALNKLNSQSGSLMSFMS 504 >UniRef50_A8W113 Flagellar capping protein-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W113_9BACI Length = 513 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 100/522 (19%), Positives = 194/522 (37%), Gaps = 68/522 (13%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G SG+D++ ++ L A++ + + Q ++ Y + F+ Sbjct: 2 DMRMTGFASGMDINQMVSDLMRAERQPMERMEQNQQELILQMDKYREVNREFMQFRDNTF 61 Query: 63 A--LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR--------- 111 L ++++ + + +S+ A SAT + A G YT LA + T + Sbjct: 62 DSVLRRSNMTAQNAVSSNENAVSATASAGAAQGTYTFEDVSLASSTTNVSTERIGVDGAD 121 Query: 112 ------TTRDDTKTAIATSDSKLTIQQ---GGDKDPITIDISAANSSLSGIRDAINNAKA 162 D + I G+ + +++LS + INN++ Sbjct: 122 YTATLDEVFGDELAMNNDGEVVFDITTYGPDGEAINGSFSFDPESATLSEVFAEINNSEL 181 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAA 222 G+ A G R+S+T G N G + + + + + V+ Sbjct: 182 GIQAYFDTDG---GRISLTRTTEGAFNP----DDGPEIDFNDSAFLTDNLALNGDE-VSG 233 Query: 223 QNAQLTVNNVAIENSSNTISDALENITLNLND-VTTGNQTLTITQDTSKAQTAIKDWVNA 281 +NA T+N +A+E SSN+ ++ + +NLN + G T+ + DT + I ++V+ Sbjct: 234 ENASFTMNGLAMERSSNSF--NIDGLQVNLNSNMENGQATVRVNTDTDQIMETITNFVDE 291 Query: 282 YNSLIDTFSS-----------------LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQ 324 YN +I + + ++ + +G L DST+ + Q Sbjct: 292 YNEMIGGMDDTVSEEYYRDYAPLTEEQMQAMEEREIEMWNERAESGLLRRDSTINSALNQ 351 Query: 325 LKSMLSNTVSSS----SYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALI 377 + N V + ++ L +IGITT G+LE+D +L A++ D+ V L Sbjct: 352 FRMDFYNPVDAGMDNQTFSQLTEIGITTSSDFQDRGRLEIDETQLRNAIESDSESVYQLF 411 Query: 378 VGDGKKTGI-----TTTIGSNLTSWLSTTGIIKAATDG--------VSKTLNKLTKDYNA 424 DG+ + ++ + G TD + + L ++ + Sbjct: 412 AADGEDENQDQRGIARRLRDTASNAIEQIGNRVGRTDSPGSIQSSTLGRELLQVEDQMSN 471 Query: 425 ASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 R+ RY QFT ++ M N+ + L Q Sbjct: 472 FERRMQQVEERYWSQFTAMEQAMAQANAQAEQLMSQLGGLQQ 513 >UniRef50_A4SI37 LafB n=4 Tax=Aeromonas RepID=A4SI37_AERS4 Length = 427 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 114/450 (25%), Positives = 208/450 (46%), Gaps = 36/450 (8%) Query: 13 LDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D +S L A ++ + + Q + SA TL + L+TFQT L+KA Sbjct: 3 IDPASTAMQLVAIERKNMDALLKKQMDGIKGQQSALSTLNTKLSTFQTMLKDLNKASNLQ 62 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 A T S + T+ G A +G+Y V LAQ+ + D++TA +D ++ Sbjct: 63 AQKATMSQDGVMTVTSNGKASSGQYNFFVEQLAQSHQI---GLSLDSETAPLPADGVFSL 119 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLD 188 G I + A S++ + IN+A GV A+++ +G+ + +TS D+GL+ Sbjct: 120 TVKGKTIDIDLATLPAGSTVKDLVSHINDAKDNPGVKATLVRT-DGKVNMVLTSKDSGLE 178 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDAL 245 NA+ ++ GD + A+ +G AQ+A+L + + I ++SN I + + Sbjct: 179 NAIVVNYRGDASNSL------GAAISGKTDITKAQDAKLRMGGDNPLTITSASNKIENVV 232 Query: 246 ENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 + +TL L + I QD ++K +V++YN LID + +T Sbjct: 233 DGLTLQLTKAQKNGDAPLLVNIEQDKEAVTGSLKKFVDSYNELIDELAKMTS-------- 284 Query: 303 DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKL 362 S + GAL DS +R++++ L + + + + +L+ +GI TD GKL Sbjct: 285 -SDPKAPGALSSDSGVRSLKSVLSNSVRDLPNG---LSLSSLGIKTD-KAGKLSFSETDF 339 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDY 422 AL+KD +G ++GD G+ + +L + G +K G+ + ++ + Sbjct: 340 NKALEKDPELLGKALMGD---DGLLKRMSDSLDPYTKRDGALKGRKSGLEASEKRVNERM 396 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 A R+D+ RY QFT ++ ++ ++ S Sbjct: 397 EALDRRMDSAYKRYLNQFTTMNQMLQTMGS 426 >UniRef50_B8CYT6 Flagellar hook-associated 2 domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYT6_HALOH Length = 448 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 111/471 (23%), Positives = 215/471 (45%), Gaps = 38/471 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S S G+G+GLD + I+D + ++ + + QQ + LSA+G+++S L +F++ Sbjct: 2 SFSIGGLGTGLDTNQIIDQMMQIERRPIYLLQQQQEEIQSDLSAWGSVESKLNSFKSKVD 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + +F + T + T T +A G Y I +T LAQ+ + + D T Sbjct: 62 DI--ESIFGKMAVTVNDTEVVDVTVDSSASLGTYNIEITQLAQSHAVASDAQDDSTSNLN 119 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSV 180 + T G + + SL I++ IN + GV+A+II+ L + Sbjct: 120 LSG----TFSINGTDITVN-----TDDSLEDIKNLINQTSDTGVTANIIDNT-----LVL 165 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 SN+TG N+++ D++ +G + A+ AQ+A +++ ++I SSN Sbjct: 166 KSNETGTTNSIS-ISDVSDSVAQQLGLISDAAGTIKNELQTAQDAIFSLDGLSITRSSNE 224 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 I+D ++ +T++L + T+ +D IK + +YNS T SS+T+ Sbjct: 225 INDVIQGVTISLKKGGGASTQFTVNKDIGGMIEEIKALIGSYNSAAGTISSMTE------ 278 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV--SSSSYKTLAQIGITTDPSDGKLELD 358 +G L GD TL I +L+ L++ +S+ L+ IGI +D G + ++ Sbjct: 279 -------KDGELQGDVTLNQIAFKLRRNLTDPFFADNSAINQLSLIGIESD-RYGNISVN 330 Query: 359 ADKLTAALKKDASGVGALIVGDGKKTGI---TTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 +L+ AL+ V AL G + + L+S L + G + + + + + Sbjct: 331 ETELSDALENSFEDVKALFTATSSTEGYSGLQERMSNYLSSILDSNGFVDGTKEMLQEQI 390 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + ++ + + + ++ F ++ + S+N+ S+L QF N S+ Sbjct: 391 DDINEEIQDLEYSMTLREQKLRQDFIAMENAVASMNNQLSWLQGQFSNMSS 441 >UniRef50_Q03475 Lateral flagellar hook-associated protein 2 n=17 Tax=Vibrionaceae RepID=FLIDL_VIBPA Length = 445 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 204/463 (44%), Gaps = 36/463 (7%) Query: 11 SGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA-- 67 S +D ++ + Q +++ ++LSA G ++SA+ F+TA ++ + Sbjct: 2 SSIDPATFAAQFAQIEIQPFKQRYQLQTNTYQSQLSALGKVESAMREFRTALNEMNSSTN 61 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 + +++ S F+A A++G Y I V +A + ++T D T Sbjct: 62 SIIKNSTSISQEGYFTANADAKALSGSYQIFVEQVATSHQVSTGMPADLDATTEIPKTGN 121 Query: 128 LTIQQGGDKDPITI----DISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVT 181 L G I + +++S + AINN GV+A+++ NG+ ++ Sbjct: 122 LEFTINGKTMTIDLSTVDTDGDGVTTVSDLTKAINNNSDNPGVNATLVR-SNGQTHFMLS 180 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENS 237 S +TG+ N + +S +G + + A Q+A + + + + NS Sbjct: 181 STETGVANQINVSATGTGQAWFEDAF------TNLSQISAPQDAVIWLGAEKTGLKLTNS 234 Query: 238 SNTISDALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SNT ++ + + + T +T L I D + + +V+AYN+LI T T+ Sbjct: 235 SNTFEGVIDGVDITVTKAQTSGETAIGLGIGADDEATKEQLNKFVDAYNTLISTIDEHTQ 294 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 S+ G L D T+R+I++QL S++ L++IG+T D GK Sbjct: 295 IG-------SEDKKRGVLASDPTMRSIESQLSSLVRGEHGG---MRLSEIGVTLD-RHGK 343 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 L++D +K A K +++G+ A+ GDG + + ++G K+ + + Sbjct: 344 LKVDQEKFAEAQKNNSAGLEAMFNGDGALLDSMDAMAEPFLKF--SSGAFKSRKEALQAN 401 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 L++L+ + D RY +QFTQ++ LMT +N T S Sbjct: 402 LDRLSDKQTTLERKYDMSYKRYLKQFTQMNTLMTQMNQTMSMF 444 >UniRef50_A4BUD0 Flagellar hook-associated protein 2 n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUD0_9GAMM Length = 682 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 145/422 (34%), Positives = 217/422 (51%), Gaps = 37/422 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA ISSLG+GSGLD+ ++D L AA++A + ++ +++ A+LSAYG LKSAL+ FQ Sbjct: 1 MAGISSLGIGSGLDIGGLVDKLVAAEQAPVQNRLNRREAQVQAELSAYGNLKSALSGFQD 60 Query: 60 ANTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 LS+A F +T+S++ A + + + A G+ + V L + Sbjct: 61 KVQGLSQASDFRVLKATSSNSEAVAVSASSAATVGRLDLEVNQL---AQSQAVASAAFAT 117 Query: 119 TAIATSDSKLTIQQGGDKDPI----------------TIDISAANSSLSGIRDAINNAKA 162 +A LT++ G + TIDI AA +SL+GIRDAINNA A Sbjct: 118 SATPVGSGTLTLRFGTVTTDVDGAVNGFKQNPDKAVATIDIPAAVNSLAGIRDAINNADA 177 Query: 163 GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ----SFMGYDASASSNGMEV 218 GVSASIIN G GE RL + DTG N + V+ DD + S+ + Sbjct: 178 GVSASIINDGVGE-RLIFNTTDTGATNGFVIEVADDDGNNTDAAGLSQLAFNTSATQSQQ 236 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 + A Q+AQL VN +A+ +SN I+D +E +TL++ TT + +TQDT + I+ + Sbjct: 237 ARAGQDAQLIVNGLAVSRASNQITDLIEGLTLSVQATTTSAARIDVTQDTDTVKEKIQGF 296 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS- 337 V+A+N L S LT + D++ G L GD+T+R I ++L + ++ + S Sbjct: 297 VDAFNQLRQQISQLTSF-------DAEKKQGGVLQGDATVRGIDSRLFRLTTSEIPGLSG 349 Query: 338 --YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 ++LA +GITT SDG L +D KL+ AL+ VGAL G G N Sbjct: 350 RAIRSLADLGITT-ASDGTLAIDDAKLSGALEAHFDEVGALFGIGGLADGSGFRYVGNTD 408 Query: 396 SW 397 + Sbjct: 409 AT 410 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 81/436 (18%), Positives = 157/436 (36%), Gaps = 40/436 (9%) Query: 53 ALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISV---THLAQAQTLT 109 A++ T L + S +TT+S T + + K V L Q + Sbjct: 251 AVSRASNQITDLIEGLTLSVQATTTSAARIDVTQDTDTVKEKIQGFVDAFNQLRQQISQL 310 Query: 110 TRTTRDDTKTAIATSDSKL-TIQQGGDKDPITIDISAANSSLSGIRDA-INNAKAGVSAS 167 T + + + D+ + I + + + ++ + D I A G A Sbjct: 311 TSFDAEKKQGGVLQGDATVRGIDSRLFRLTTSEIPGLSGRAIRSLADLGITTASDGTLA- 369 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 I+ L ++ G + G A + V+ AQ A + Sbjct: 370 -IDDAKLSGALEAHFDEVGALFGIGGLADGSGFRYVGNTDATRAGEYAVAVTRLAQQASI 428 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 +A S + N TL L ++++ +T +Y S D Sbjct: 429 QGAGIAPPTSEAPLVIDASNDTLQLTVNGVTSESIQLTH-------------GSYTSGSD 475 Query: 288 TFSSLTKYTAVDAGADSQSSSNGA-LLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 + L DA + GD+ L ++ S + T++S + T + +G Sbjct: 476 AAAELQARINGDANLKEAGARVSVAFSGDAFLIA-SSRYGSESTVTLNSVATNTPSSLGF 534 Query: 347 TTDPS----------DGKLELDADKLTAALKKDASGVGALIVGDGK--------KTGITT 388 ++ + DG L + +L AA + A G+ I G G++ Sbjct: 535 SSGQTGTGADVEGTIDGAAALGSGRLLAAQEGRADGLKIEITGQSTGPLGTLTFTRGLSD 594 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 I + L +L+ G++ + T+ +S+ ++ + +D + + R++ RY QF +D L+ Sbjct: 595 QIDTTLGVYLNGDGLLDSLTESLSERIDAIGEDRDQLAARMEQVRQRYLNQFNAMDALVA 654 Query: 449 SLNSTSSYLTQQFENN 464 LN+T+S+L Q Sbjct: 655 QLNTTASFLDNQLPGL 670 >UniRef50_A8GYK4 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A8GYK4_SHEPA Length = 472 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 106/490 (21%), Positives = 218/490 (44%), Gaps = 60/490 (12%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 + SG+ ++ + L A++A I + + + A+L AY L+ +L + + A+ Sbjct: 1 MISGMGGATFAEQLIVAERAGKDQIFKSNMTKYEAQLDAYKILERSLDSMSSKLEAI-DG 59 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 D F + +++ S S + A G Y + + LAQA +T +D+ + + Sbjct: 60 DAFESKTSSVSDDNASISVESGAPTGDYDLHIEQLAQAHQVTKSFASEDS---LLPTTGV 116 Query: 128 LTIQQGGD-KDPITIDIS----AANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSV 180 + IQ G D D I++D+S +++ + IN+ GV AS++ G G+ L + Sbjct: 117 INIQLGSDPSDSISLDMSKLNAGGTATVKDLTGMINSHSGNPGVQASLVRTG-GQVELML 175 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S +TG N +++++ D A GM AAQ+A++ +N + I +SSN Sbjct: 176 SSKETGAANNISVTMDPMDG--------TGAKDWGMTERRAAQDAKVNLNGIDIVSSSNN 227 Query: 241 ISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 + + ++ +++ LN + + I DT ++ AI+D+V+ +N L+D + LT+ Sbjct: 228 LVNVIDGVSIELNKAHKPGESSNIKIESDTDASEQAIEDFVDIFNDLMDEINKLTRSMGS 287 Query: 299 DAGADSQSSSN-------------------------------GALLGDSTLRTIQTQLKS 327 +A + + G L GDS++R +Q ++ Sbjct: 288 EALDELNQENADKDDNSDEDKEDEDKEDDEDDSNSSITEDQLGVLKGDSSIRMLQQNMRD 347 Query: 328 MLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 + + + L+ IG+ DGKL++D++KL+ ALK + + V + G Sbjct: 348 AIFDAAPNG--MRLSDIGVEF-GRDGKLDVDSEKLSKALKDNPNAVQDMFTDTGS---YV 401 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 + + + G + D + + ++ + +++ + Y QFT ++ + Sbjct: 402 DKLDKIIEPFTQFQGSMDLKKDNLEMQIERVETSMDNHDRQMEQRYQIYLAQFTAMEATI 461 Query: 448 TSLNSTSSYL 457 + L S+S+ Sbjct: 462 SQLQSSSALF 471 >UniRef50_Q2Y9C9 Flagellar hook-associated 2-like n=2 Tax=Betaproteobacteria RepID=Q2Y9C9_NITMU Length = 669 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 134/430 (31%), Positives = 223/430 (51%), Gaps = 34/430 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +I++ G GS LD++ I+ L AA++ L + ++S + AKLSAYGTLK AL+ FQTA Sbjct: 2 AITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQ 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGN--AIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ ++A S +++ ++ +AT N A+ G Y++ V LAQ Q + + T + Sbjct: 62 GLADPAKYNAVSASAADSSLLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFAS-TSS 120 Query: 120 AIATSDSKL----------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 + + + T K TI I ++++LSG+RDAIN A AGVSA+I+ Sbjct: 121 TVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTLSGVRDAINAANAGVSATIV 180 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------SFMGYDASASSN---GMEVSV 220 N G G +L +T+ D G +++ ++VS DD S + +D + + Sbjct: 181 NDGAGN-KLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQ 239 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWV 279 AAQ+A+L ++ + I SSNTI+DA+E +TL+L G TL ++ DT+ A+TA++ +V Sbjct: 240 AAQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS-SY 338 +YNS+ T S+L+ Y + L GDS +IQ ++S L+ + S + Sbjct: 300 KSYNSINQTLSNLSAYNPG-------AKKGAILQGDSAAFSIQRGIRSALTAMMGDSRGF 352 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +L+QIG+T DG L +D+ KL A++ +G L G T + + Sbjct: 353 TSLSQIGVTLQ-KDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSLISYEGATDKTV 411 Query: 399 STTGIIKAAT 408 + + Sbjct: 412 AGNYAVTVTQ 421 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 41/80 (51%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + +L+T G+I +G++ ++ L + S R++ ARY+ QF+ LD Sbjct: 584 GYAERLSKVAEEFLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSALD 643 Query: 445 VLMTSLNSTSSYLTQQFENN 464 ++ SL TS +L QQ + Sbjct: 644 AMLGSLTQTSQFLQQQLASL 663 >UniRef50_A1WR42 Flagellar hook-associated 2 domain protein n=2 Tax=Comamonadaceae RepID=A1WR42_VEREI Length = 482 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 135/489 (27%), Positives = 239/489 (48%), Gaps = 34/489 (6%) Query: 1 MASISSLGVGS-GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+ISS G+GS GLD+ +I+ L A ++ L + Q ++ K+SA+G LKS + T Sbjct: 1 MATISSPGIGSSGLDVKNIISQLVALERKPLDALKQQATTVNTKISAFGQLKSLVATLDD 60 Query: 60 ANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ +++ ++ +S + SAT G + ++ + V LA+AQ + T Sbjct: 61 STRALASVTGWNSVSTASSDSKYVSATAPGGTLPTRFDVEVQSLAKAQATASGTLL-PVG 119 Query: 119 TAIATSDSKLTIQ---------QGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 A+ +L + P+ I ISA + L + IN A A VSA+++ Sbjct: 120 AALRAGTLRLELGQWSVAPHSFIPASGQPVDIRISAGDK-LVDVASKINGAGAAVSAAVL 178 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSV---------SGDDALQSFMGYDASASSNGMEVSV 220 + +GE RL + S +TG LSV + A + +S +++ V+ Sbjct: 179 SDPSGE-RLLLRSQNTGQAAGFRLSVLPQGAASGGADGAAADTAALDLSSLATDSSTVTQ 237 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 AA +AQ TVN +A+ ++SNT + + + VT +++++D S I D+V Sbjct: 238 AAADAQATVNGIAVTSASNTFASTVSGVGFQALQVTQAPVEISVSKDDSATVARIGDFVK 297 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN-TVSSSSYK 339 AYN++ D TKY D+++ + G L GD+T +Q L +L + + S +++ Sbjct: 298 AYNAINDLLQDATKY-------DAKTRTAGLLQGDATALALQNSLLRVLRSVSTSGGAFQ 350 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI--VGDGKKTGITTTIGSNLTSW 397 LA +GIT G L +D +L AL + V L+ G G GI + + ++ Sbjct: 351 RLADVGITQQLGGG-LSVDTGRLNRALAERPGDVKNLLSSTGGGSANGIAVQMKALTSAL 409 Query: 398 LSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 LS TG ++ D + ++L + ++D + DA R +++ LD ++SLN ++Y+ Sbjct: 410 LSGTGFFQSKYDTLQQSLARNSRDQAQVNAAADAFEQRITQRYNALDTQLSSLNGLNAYI 469 Query: 458 TQQFENNSN 466 +QQ + Sbjct: 470 SQQVAIWNK 478 >UniRef50_C5UZY6 Flagellar hook-associated 2 domain protein n=2 Tax=Gallionellaceae RepID=C5UZY6_9PROT Length = 477 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 143/477 (29%), Positives = 247/477 (51%), Gaps = 42/477 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D+++I+ SL A ++ + ++ QQ+S+ AK+S YGT++S + +FQTA AL + S Sbjct: 14 IDVNTIVSSLMAVERLPVNRLNTQQTSYQAKISTYGTMQSQMASFQTAAAALGSSSSSSL 73 Query: 73 ---TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 +++S T +A+ + A+AG Y ++VT LAQ+Q L + T + + + Sbjct: 74 LAFKTSSSDTGVLTASASSTAVAGTYALNVTSLAQSQNLVSAGQASSTTAISDGTSTTIN 133 Query: 130 IQQGG--------------------DKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 G +I I ++N++L GI DAIN A G++A+I+ Sbjct: 134 FDFGTLSGGTLTGGVYTSPATFTSNGTATQSITIDSSNNTLQGISDAINAANIGMTATIV 193 Query: 170 NVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA---SSNGMEVSVAAQNA 225 N G+ YRL++TS TG+ N++ +S SG D + + ++ M +VAAQN+ Sbjct: 194 NDGSSSPYRLTLTSTATGISNSVKISTSGGDGTLDTLLANDPTGLPAAQHMNQTVAAQNS 253 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 TVN +AI N+SNT+++A++ +TLNLN ++ TLTI +DT+ TA+ ++V+AYNS+ Sbjct: 254 NFTVNGIAITNTSNTVTNAMQGVTLNLNTISAAPVTLTIARDTTAVSTAVSNFVSAYNSM 313 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 + + Y S L GD TLR +QTQ++ + + V+ + + G Sbjct: 314 YSMLQTASAY-----------KSGSPLAGDPTLRDLQTQMRGIAAGAVTGGTLSAIGDAG 362 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 I+ + G ++LD+ KL+ AL + S V L TG T+ + + L+ G Sbjct: 363 ISFTAA-GVMQLDSAKLSTALSNNYSAVANLF---NSSTGFATSFENMAKNTLAFDGAFA 418 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 T +++ + + RY+ Q++ L+V++ + TSSYLTQQ Sbjct: 419 NRTASLNQAVKSNNDRIGVMEANLANIEKRYRAQYSSLNVMLAEMGKTSSYLTQQLS 475 >UniRef50_Q1GNZ5 Flagellar hook-associated 2-like protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GNZ5_SPHAL Length = 456 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 114/475 (24%), Positives = 203/475 (42%), Gaps = 40/475 (8%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +SLG GSG+D+ ++D L+ A + + ++ + ++SA ++ L F + + Sbjct: 7 NSLGFGSGIDIPKLVDDLSNASRQPKIARLTELTQANQTRISAVAKARADLDGFADSLSQ 66 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKY--TISVTHLAQAQTLTTRTTRDDTKTAI 121 + +T T S + AT+ A + T+ V LA+AQT + D T Sbjct: 67 MIGDGTLRSTPTVSDDSVLGATSRAGLSADSFAATVVVNQLARAQTNFSGVVADRTA--- 123 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 A +T+ GG TI I N++L G+ DAIN + AGV+ASII G +RL + Sbjct: 124 AIGTGTMTLTVGG--VAKTITIDGTNNNLDGLADAINASAAGVTASIIAD-EGGHRLILK 180 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 TG N TL G + A+ GM + +A +A+ T++ +A ++N + Sbjct: 181 GP-TGEANGFTLVADAGADP----GLASFATDGGMTLGQSAADAEFTIDGIAFNRATNIV 235 Query: 242 SDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 D + ++L L G + + + + D+V YN L + ++ + Sbjct: 236 DDVVPGMSLTLKKAAPGQPVDIGANRPLDMIKQTVGDFVAVYNQLKASLTAASNLPGAT- 294 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDA 359 ++LR ++ L ++ +SS S L+ IGI+ +G L +D Sbjct: 295 ---------------TSLRELERDLGGLIHQVISSHGSINQLSDIGISV-TKEGLLSVDN 338 Query: 360 DKLTAALKKDASGVGALIV-------GDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 +L AL+ DA V AL + GI + + + G I + + Sbjct: 339 ARLDKALETDAGAVEALFNPRRDATHNETTDPGIAFALDAIRDRAVGANGAIDRVSRSLE 398 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 L + +R DA R ++Q+ L+ + + +T +YL QQ + +N Sbjct: 399 TRQRTLAEQLAKVEEREDAYRTRLEKQYGALEARLAAFKATQTYLEQQIKLWTNQ 453 >UniRef50_Q2NWZ3 Flagellar hook-associated protein 2 FliD n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWZ3_SODGM Length = 486 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 228/490 (46%), Gaps = 42/490 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT----LTPISNQQSSFTAKLSAYGTLKSALTT 56 M IS G+ DSL Q L P +Q + +K+SA+G ++S+L T Sbjct: 1 MGGISVTGIS---------DSLMEMQAKKNTLLLQPYQLRQKNIESKISAWGKIRSSLQT 51 Query: 57 FQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD- 115 + AL ++ S AFSA+ + A+AG + I V+ LA TL+ + Sbjct: 52 LLEKSNALKNDAFYAMK--MSENKAFSASASSGAMAGTHNIRVSQLAHNHTLSLTMEKGI 109 Query: 116 DTKTAIATSDSKLTIQQGGDKDPIT---IDISAANSSLSGIRDAINNAKAGVSASIIN-V 171 DT + + L I Q G+ I I ++ +SL+GI +IN AG+ A + + Sbjct: 110 DTPLGNSAATRNLKISQKGENGQIKETVISLAQEETSLAGIAKSINGKNAGIRAEVKSVD 169 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY-----------DASASSNGMEVSV 220 G RL + + D+G M LSV GD L + M Y D+ S ++ + Sbjct: 170 NEGTQRLILRAQDSGSAGEMALSVEGDTTLAAIMNYTTPPEEPGDSTDSGEVSEKIKQDL 229 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDW 278 A +A + V+ SSNTI+D L +TL L + +++ LT++ D S Q A++++ Sbjct: 230 PATDAIIWVDGNKYTRSSNTINDILTGVTLTLKQTSKDDESEALTLSPDESAVQEAVEEF 289 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQS------SSNGALLGDSTLRTIQTQLKSMLSNT 332 V A+N I SSL+K+T + ++NG L G+S L +Q L+ + Sbjct: 290 VTAFNDYITQSSSLSKFTTANYSNLKTDTVALPDATNGPLAGESLLTDLQALLRRDAGSN 349 Query: 333 VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 + ++A +GI D GKLELD+ KL + + V L +G +K G+ + Sbjct: 350 YGNDDVTSIADLGIKVDAKTGKLELDSTKLKNKIHTNPEEVQRLFLGTEEKPGLAGVMSD 409 Query: 393 NLTSWLSTTG---IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 ++ ++ G IIK T+ + K + K I+A++ +++Q+ Q++V +T Sbjct: 410 HIKGYVGRDGKGNIIKDETEKLEKDKKEAKKQLERTEATIEARMRAFQKQYQQMEVAITK 469 Query: 450 LNSTSSYLTQ 459 L S L+ Sbjct: 470 LQSLQGSLSA 479 >UniRef50_D2S9N2 Flagellar hook-associated 2 domain protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9N2_9ACTO Length = 469 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 114/495 (23%), Positives = 205/495 (41%), Gaps = 57/495 (11%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M S+S G+ SGLD +S++ L AA+ T + Q S+ AY + + + + A Sbjct: 1 MVSLSVDGLVSGLDTTSLVSQLVAAEALPQTRLKAQMSAAQKAADAYRAVNTKVDAVRAA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGK-YTISVTHLAQAQTLTTRTTRDDTKT 119 AL+ L +A + S+ + +A+ A+ G + +V LA + + T T T Sbjct: 61 AEALTADGLAAARTAKSTAASVTASATSTAVPGSRISFTVGSLASTASYLSTATWATTGT 120 Query: 120 AI-----------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSAS 167 + S LTI + D P ID +++L+ IN+ GV A+ Sbjct: 121 DVRKPIGPDATTPGPSPWPLTITRP-DGTPTPIDPPDQDATLAETIAYINDREDLGVRAT 179 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 +N GNG YRL +TS G + SA+ + V A++A L Sbjct: 180 AVNTGNG-YRLQLTSTTPGAKGYFDVQ---------------SAAGDLFTVVSPAKDATL 223 Query: 228 TVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 V VA+ + +NT +D + + + + + + + + + +D T +K V+A N+ + Sbjct: 224 DVGGVAVTSPTNTFADLMTGVAITVTEESDTSVVVEVGEDLKTVATKVKTLVDAVNAALT 283 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS----------S 337 + ++ T DS +SS L GD LR + ++L + +S+ V + + Sbjct: 284 SIATNT---------DSGTSSTAVLKGDFALRQLASRLLTKVSDAVPGAVPSASTPGTYT 334 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT-------I 390 + A +G+ DGK+ D +++ D V L+ G G Sbjct: 335 AGSPAALGVQL-TRDGKVTFDEATFLKSMQSDPEAVHRLLGGAPASDGAPAVEGLAQRLA 393 Query: 391 GSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + + STTG + G + R+ A+ QF+ ++ ++SL Sbjct: 394 TTAKDATKSTTGTLTLLAQGREALVKDYQSRIADWDLRLAARKEALTRQFSAMETALSSL 453 Query: 451 NSTSSYLTQQFENNS 465 + SS+L Q + S Sbjct: 454 KNQSSWLAGQLGSLS 468 >UniRef50_Q1LL30 Flagellar hook-associated 2-like protein n=3 Tax=Cupriavidus RepID=Q1LL30_RALME Length = 498 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 193/491 (39%), Positives = 288/491 (58%), Gaps = 38/491 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 IS+LGVGSGLDLSS+LD LT A++A LT I+ +Q S+ KLSAYG ++S L FQ + + Sbjct: 16 ISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQ 75 Query: 64 LSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRT---------- 112 L+ F AT+ +SS TA SA + A G Y ++VT LAQAQ+L ++ Sbjct: 76 LASQSFFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKGQANQAAAIGT 135 Query: 113 --------------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN 158 +T +A + + T + I I +++++L GI AIN Sbjct: 136 GTIHVDFGSISGGTLDSNTSSATYGTYTGATFTANSANTGVDITIDSSHNTLQGIASAIN 195 Query: 159 NAKAGVSASIINVGNGE-YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA--SASSNG 215 NA AGV+ASIIN G+G YRL + SN+TG N++ LSV+ D + A + Sbjct: 196 NANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGTALANLVGYDPAGTQN 255 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 ++ +VAAQN+QLTVNN+AI+++SNT+SDA+ +T+ L TG ++++ +DTS T I Sbjct: 256 LQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTL--AQTGTSSVSVQRDTSSIMTGI 313 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 + +V AYN+L T +SL+ Y D + + L GDSTL +Q+Q++S+L+ S+ Sbjct: 314 QGFVTAYNNLQSTSASLSAY-------DPSTQTASPLTGDSTLSIMQSQMRSLLNTPQSN 366 Query: 336 SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 ++ TL+QIGI+ DG L +D KLT AL +A V L +G I + + Sbjct: 367 NALTTLSQIGISFQ-DDGTLAVDTSKLTTALNNNAGAVANLFGNTDGVSGYGNQISTLVK 425 Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + S+TG + AT G++ TL L+ Y+ +I+A +A YK QFTQLDV+M+ + STS+ Sbjct: 426 NLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQMQSTSA 485 Query: 456 YLTQQFENNSN 466 YLTQQF +S+ Sbjct: 486 YLTQQFSTSSS 496 >UniRef50_Q6AMN7 Related to flagellar hook-associated protein 2 n=1 Tax=Desulfotalea psychrophila RepID=Q6AMN7_DESPS Length = 485 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 118/500 (23%), Positives = 212/500 (42%), Gaps = 50/500 (10%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS G+ +GL ++ L A+ L + Q+++ L AY L + + Sbjct: 1 MGDISFGGLATGLPTEDLIAGLMKAESKPLDRLEKQKTNDATHLEAYEEYNDLLDELRES 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +A+ T S + ++ A G Y ++VT LAQ Q T ++ Sbjct: 61 VSAMHLTSDVRTTDVKLSNEDTLSASSSGAATGSYNVAVTQLAQVQKNVTAGVSSQSEAM 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVG--NGEY 176 + + + I ++L G+ +AIN+ K GV+ASIIN G Y Sbjct: 121 FSNGHLTI--------NDTKIVFDGDKTNLDGMLEAINSVADKTGVTASIINDGKETDNY 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L D D ++ G + + AQ + V+ + I++ Sbjct: 173 HLVFAGKDASTDFTISTD-------LKVKGAEGETVDFANTRTSVAQQSIAYVDGIEIQS 225 Query: 237 SSNTISDALENITLNLNDVTT-------------GNQTLTITQDTSKAQTAIKDWVNAYN 283 +SNT+ + +TLNLN+V+ + +T ++ + I+ +V+AYN Sbjct: 226 NSNTLKGVVGGLTLNLNEVSKVISPADGDTPAVYATTVVELTANSDSLKEKIEGFVSAYN 285 Query: 284 SLIDTFSSLTKYTA------VDAGADSQSSSNG---------ALLGDSTLRTIQTQLKSM 328 +D S +Y A + +D++ + L GD TL + +L+S+ Sbjct: 286 KAMDWIVSGYEYKAENDKKIDASSSDAEKEAAAGQKSKKLSNLLRGDPTLNKAKRELQSI 345 Query: 329 LSNTVSSSS-YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGIT 387 L + +SS + L++IGI T DG L ++ KL AL ++ V L GD K G+ Sbjct: 346 LGESADNSSKFNILSEIGIKTQ-RDGTLLVNKTKLDKALDENYGDVVTLFAGDASKDGLM 404 Query: 388 TTIGS-NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVL 446 + S L +T G+ T ++ K ++++ RY+ QFT L++L Sbjct: 405 DKLNSKLLEQTSATRGVYAEKKGHYKATGKRIDKQIANQKTQLESIEKRYRAQFTALELL 464 Query: 447 MTSLNSTSSYLTQQFENNSN 466 ++ +NS SSY++Q ++++ Sbjct: 465 VSKMNSQSSYISQYLTDSTS 484 >UniRef50_B4SIK7 Flagellar hook-associated 2 domain protein n=3 Tax=Stenotrophomonas RepID=B4SIK7_STRM5 Length = 472 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 140/491 (28%), Positives = 229/491 (46%), Gaps = 44/491 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA G+GSGL++S I++ L AA + ++ QQS +LS+ GT+ SA +T Sbjct: 1 MADFGYGGIGSGLNISDIVNKLVAADRKPADNALNLQQSKTKMQLSSVGTVTSAFDKLKT 60 Query: 60 ANTALSKADLFSATSTTSS--------TTAFSATTA--------GNAIAGKYTISVTHLA 103 A TAL F + T++ +A+ A A G + I V +LA Sbjct: 61 ALTALKATTAFDTRTVTATGKAGPNNADDVLTASVALYDLGTSKAAAANGTHKIDVKNLA 120 Query: 104 QAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-- 161 A L T+ T T LT+ G + I++ A + +L+ +R+ I+ A Sbjct: 121 SAHKLIADTSVPKTDT-FGAGTLTLTVGVGDKAKTMNIEVEAGD-TLTTVRNKIDAAGRK 178 Query: 162 AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GV A++I+ G+ +Y LS+ TG +A+ L G D + ++ + Sbjct: 179 EGVQATLISSGDNQY-LSIAQEKTGAASAIKLEYGGSDPKLGAL-------VGSLKENSP 230 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 A +A LT++ V + ++SNT++DA+ +TLNL G T+ I+ DT+ A ++++V A Sbjct: 231 ATDALLTIDGVEVVSASNTVTDAVPGLTLNLKV--KGLSTVVISTDTTAATKVMQEFVTA 288 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+ I ++ TKY D+++ AL GD+ +R QL+S +S + + L Sbjct: 289 YNAAIAAINTETKY-------DAKTKEASALTGDAQMRGALAQLRSTMSGVLLDLAGDKL 341 Query: 342 AQIGITTDPS-----DGKLELDADKLTAALKKDASGVGALIVGD-GKKTGITTTIGSNLT 395 + DG L LD K AAL + I GD G + T + ++ Sbjct: 342 DAKALGLQTRGYPNADGTLVLDTTKFAAALAAQPEKIRQAITGDTGGAGRLYTMVDGYVS 401 Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + + G A T G++ TL+ + K R+ ARYK+QF LD LM L +S+ Sbjct: 402 TTVGKEGAFVARTKGLNSTLDNIDKRRKDLDARMVGVEARYKKQFVALDSLMGKLQQSSN 461 Query: 456 YLTQQFENNSN 466 L+QQ + Sbjct: 462 TLSQQLSQLNR 472 >UniRef50_D0MGE2 Flagellar hook-associated 2 domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGE2_RHOM4 Length = 500 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 92/491 (18%), Positives = 193/491 (39%), Gaps = 53/491 (10%) Query: 15 LSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL--FSA 72 ++ ++ + + + +++ S L+ + L+ F Sbjct: 16 YEQLISAIISIESQPKLELQAKKAEQERLKGVVKDFDSKLSALHSLLKTLTDPLARPFQG 75 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA----IATSDSKL 128 S T+S T F+ + +A G +T+ V LA A T ++ + Sbjct: 76 KSATTSATEFTVSAGDSAALGTHTLEVKRLASADTRISKQYTSSGSSLRSFFDTNGAQTF 135 Query: 129 TI-------QQGGDKDPITIDISAANSS----LSGIRDAINNA------------KAGVS 165 TI ++ I + ++ ++ L+ I AIN+A Sbjct: 136 TIRVASPTDTDPNNRLDIQVTVNPTGTTDEEILNEIATAINDAFQAAVDAGTIKSDERAY 195 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN---------GM 216 AS+IN + RLS+ S TG + SG L + +S G Sbjct: 196 ASVINETSSTARLSLRSGKTGFTYRLEFVDSGAGLLSELELSNNVVASGTGGGQVKYVGT 255 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 + + N+Q ++ + + +N ++DAL +TL L ++T TIT +++ + ++ Sbjct: 256 SETDSELNSQFVLDGLTLYRDANRVTDALAGVTLELKQISTSPADFTITPNSNGIKAKVE 315 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 D++ YN ++ + + D ++ + G GD ++ L++ + VS Sbjct: 316 DFIKKYNDVLLYLAGKSNV-------DGETETRGDFAGDPVFSGLRFTLRNEVVRKVSGQ 368 Query: 337 ---SYKTLAQIGITTDPSDGKLEL-DADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 + +GIT + +DG L L DADKL A++++ V +L G GI T + + Sbjct: 369 PTEGPHYITDLGITIN-NDGTLTLSDADKLIQAVERNPQAVESLFSGS---DGIATRLLT 424 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 ++ +++ T GII D + ++ +L +++ + + + QF ++ + Sbjct: 425 HVETFVKTGGIIDQREDSLEASIRRLDDRIADFEEQLARREEQLRAQFARVQETIALFQG 484 Query: 453 TSSYLTQQFEN 463 +L+ Sbjct: 485 QQQFLSGFLYG 495 >UniRef50_A3Y8V2 Flagellar capping protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8V2_9GAMM Length = 474 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 107/490 (21%), Positives = 210/490 (42%), Gaps = 46/490 (9%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ +LG GSG+DL S++ L ++Q+ + + + S + +LSA G+ +S +F A Sbjct: 2 SVGALGTGSGMDLESLVSGLVSSQRDSKIAAYEQKISDLSVELSAVGSAESVAFSFHEAV 61 Query: 62 TALSKADLFSATSTT----SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT-RTTRDD 116 ++ LF++ + A + +G+A G+Y++ V +A + + Sbjct: 62 KKVNDPRLFNSRIADIEQPDTGDALAVEASGSARNGQYSLGVDQVASGSRMELLPNVFES 121 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 + +T G + I +D + LSGI G+SASII+ G G+ Sbjct: 122 PDDVLTALGGTMTFAAGNESFTINLDGGTTLAELSGIIAQA-EKNFGISASIIDTGEGDV 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDD---------------------ALQSFMGYDASASSNG 215 RL + S+ TG N + +SV+ L + S + Sbjct: 181 RLIIESDKTGDGNDLNISVNERTLVDIMGTDTRYDFASLPQKYTDLLKSTKNNLSMIPDN 240 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 + + AQN + V+ V IE +NT A++ + + + T G +I+ D+ + +I Sbjct: 241 LISTQFAQNGIINVDGVEIEGDNNTFDKAVQGLEIEALNKTEGQVAASISTDSETIKESI 300 Query: 276 KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS 335 K ++YN ++ TF+ LT+ G L G+S LR +++ L S L T Sbjct: 301 KTLTDSYNKMVSTFNDLTQM-------------GGTLQGNSLLRNLESSLVSTLGRTFEG 347 Query: 336 SS-YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 ++T+ +GI G +++D+ KL A+ + G + G+ + Sbjct: 348 GGEFRTMFDLGIEV-ERSGLIKVDSYKLDNAISSGFKNFADMFTG---ERGVAKAFDELM 403 Query: 395 TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTS 454 ++ +G+ ++ D + + + A R++ ++Q++ LD + +N++ Sbjct: 404 QPYMGASGLFRSTEDSIQSQITSNDESREAFDLRMEQYEKTLRKQYSSLDSSIAEMNASG 463 Query: 455 SYLTQQFENN 464 +YL Q Sbjct: 464 AYLRSQLSAL 473 >UniRef50_C6HWJ0 Putative flagellar hook-associated protein, FliD n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWJ0_9BACT Length = 484 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 111/482 (23%), Positives = 200/482 (41%), Gaps = 44/482 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M + + GLD ++++ A L + Q+ AK + + ++ L F + Sbjct: 23 MRITNMSALSQGLDTEKLVNANLEAAAIPLEQMQQHQADLDAKSAIWRQVQQKLDGFLKS 82 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L FSA S +AF+ T A G Y++SV+ LA+ L + D KT Sbjct: 83 AGNLHLRQDFSAFKSIVPPHSAFTVTPGPGASLGSYSVSVSSLARPGVLVSSGVADKDKT 142 Query: 120 AI-------ATSDSKLTIQQ-----GGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 ++ A S + LT GG + ID S +L + AIN+A G+ A Sbjct: 143 SVLNIPPDGAFSHATLTFLIGDHLVGGKIRSVRIDQSTG-FTLESLAGAINDAHIGIHAM 201 Query: 168 IINVGN--GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 ++ G Y LS++S G++ + + + A A Sbjct: 202 VMRTGAPGAPYSLSLSSTKNGMNFRV---------------MEQEGLDFTFKTVQKASLA 246 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNS 284 LTVN V +++ SN ++DA+ ++L T T +I +T +T + +V +YNS Sbjct: 247 HLTVNGVPVQSESNDVADAIPGSVIHLRQTTGPTPTTASIVHNTKTIKTNVGAFVKSYNS 306 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTL 341 L+D T+ + + G LLG ++ ++ +L ++L+ + ++TL Sbjct: 307 LLDFLDKETRV-------NPATGQGGPLLGAYSVVDLRNRLGTVLTRPLPEKVQGKFRTL 359 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-T 400 A +GIT +G L D+ K AL + V L+ G G GI + L + + Sbjct: 360 ADVGITFQ-RNGHLSFDSGKFDKALASNYDDVVHLMTGQGATPGIVAGVHDLLMEFANPA 418 Query: 401 TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 +G + ++ ++ D + + +E+++ L L+ LN +Y+ QQ Sbjct: 419 SGPLAGEISDINDQERTNVREMTRKQDELANLKDQLEEKYSGLQGLLGGLNQKQAYVQQQ 478 Query: 461 FE 462 Sbjct: 479 IA 480 >UniRef50_D0KYF4 Flagellar hook-associated 2 domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYF4_HALNC Length = 468 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 140/468 (29%), Positives = 225/468 (48%), Gaps = 27/468 (5%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + IS G+GSGLD+ I+ L A+ A ++N+Q++F LSA G LKS+L++ QTA Sbjct: 14 SGISFSGLGSGLDIQGIVTQLVNAEGAPQQQILTNRQTAFNTTLSALGQLKSSLSSIQTA 73 Query: 61 NTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 A D F + T S+++ SA+ G Y + V LA AQ + + T T Sbjct: 74 VDAFQNLDTFRTRTATVSNSSILSASAIPGTALGTYQVEVDQLATAQKMASAGYASATST 133 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY- 176 L G +++ AA +L+ IRD IN A GV ASIINV NG Sbjct: 134 V---GSGTLNFTVGSGSFSVSV---AATDTLTNIRDNINAATGNTGVQASIINVDNGSGG 187 Query: 177 ---RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +L +T+ +TG N T++ D + ++ +SN + AAQ++ + ++ + Sbjct: 188 TVSKLVMTALNTGTSNGFTVTAVDSDGNNTDAVGLSALASNNLTQISAAQDSIIKIDGMQ 247 Query: 234 IENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + ++SN++S A+ +TLNL G +T+ D S TA++ V YN T +SL Sbjct: 248 VTSASNSVSTAVTGLTLNLTQAQVGTSVAVTVGTDNSPITTALQTLVTNYNKYQSTNASL 307 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGITTDP 350 T Y D ++ GALLGD T + L+S++ ++ S + LA IGI D Sbjct: 308 TSY-------DQTANQAGALLGDVTATGVNNALRSLMGQNYTTGSTTIQNLADIGIQVD- 359 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 +G + LD KL AL D + V L+ G++ + S L +L G+ + T Sbjct: 360 KNGVMSLDTTKLNQALAADPNVVKTLLT--DPTNGVSAKVDSVLNPYLQYNGVFDSRTAS 417 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 ++ L +T R++ QFT +D + +N + S+L+ Sbjct: 418 INSQLKTITTQQADLQARLNQYQTSLMAQFTAMDSYVAQMNQSMSFLS 465 >UniRef50_Q3A5J6 Flagellar biosynthesis filament capping protein, enables filament assembly n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5J6_PELCD Length = 442 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 123/477 (25%), Positives = 214/477 (44%), Gaps = 46/477 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M++I+ G+ SG+D SI+D+L +K L + + + FT++ A+ TL++ L T Sbjct: 1 MSTINFGGLASGMDTGSIVDALMEIEKQPLERLESDKEYFTSRQDAFDTLETKLKTLLGK 60 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + A S ++ S FS + +G+A+ G Y I V LA+ Q + + + Sbjct: 61 FEDLDSSGEVRAYSASAVSDEYFSVSASGSALGGSYNIEVQSLARQQKDVSDGSYESRSE 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK-----AGVSASIINVGNG 174 A T+ T DI+ N SL + D IN A GV+ASII G+G Sbjct: 121 ANFTTG---------TLTIGTTDITIDNDSLDSLVDKINAANTGDSATGVAASIIQDGSG 171 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 YR+ +T D + + SVSG + S + A + V+ V I Sbjct: 172 -YRMILTGED--ASSTFSASVSGGTTANGYAALTFST-------TQTQSQASIVVDGVTI 221 Query: 235 ENSSNTISDALENITLNLNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 SNT +A+ +++ LN V + +++D +T +KD V AYN++I+ S Sbjct: 222 TGGSNTFEEAIPGVSITLNKVHPNAGDTTVMNVSEDVDAVKTKVKDMVTAYNAVINYISD 281 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSSSYKTLAQIGITTDP 350 + DS + ++ L+ ML++ + + TL+Q+G+ T Sbjct: 282 Q---------------KDSDWGRDSGMMAVKRNLQKMLTSQIATGGDLTTLSQLGLETQ- 325 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATD 409 DG + +D L A+ D + + L+ G GI++ L S G+ Sbjct: 326 RDGTITIDNTLLEEAITTDMNIMDKLLAGGEGFDGISSLFTEYLDSTTDRVDGLAATRQT 385 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 +TL + + + R++ + + QF +++L+++LNST SYLTQQ ++ Sbjct: 386 STDRTLKTINANISKMETRLEKREEMLRAQFDAMELLISNLNSTGSYLTQQLSLFNS 442 >UniRef50_A9BF31 Flagellar hook-associated 2 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF31_PETMO Length = 502 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 102/499 (20%), Positives = 200/499 (40%), Gaps = 40/499 (8%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + G SG+D +++ L ++ L + ++ T K + + + + L F Sbjct: 8 GTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDYL 67 Query: 62 TALS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 K++L ++T+S + +AT +A + + V LA L K + Sbjct: 68 ITFKLKSNLIPKSATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKKS 127 Query: 121 -------IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 T DS TI +G + D IT+ + + ++ + D IN + GV A + N Sbjct: 128 STIGDVIGTTGDSTFTITKGTNSDTITV---SDSETIQNLIDKINASILGVEAK-FDDAN 183 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQN---AQLTVN 230 G++ + N + + S S + L + + + +A+++ + + +L+ + Sbjct: 184 GKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVELSFD 243 Query: 231 NVAIENSSNTISD---ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 + + +++ + T++L ++G ++I QD K+ +IK++V+ YN I Sbjct: 244 GSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNETIT 303 Query: 288 TFSSLTKYTAVDAGADSQSSS----NGALLGDSTLRTIQTQLKSMLSNTVS----SSSYK 339 L V + + G L GD+ L I L++M+ + V S Y Sbjct: 304 YVYDLLHEDQVTDKPTEEMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGSQYN 363 Query: 340 TLAQIGITT--------DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG---ITT 388 L IGIT+ + G L +D DKL AL +A V L + Sbjct: 364 ALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNTNAEDVWKLFATNDTTNKEYGYAQ 423 Query: 389 TIGSNLTSWLSTTGIIK---AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 ++ + L G I + + +L + DR+ + A+Y QF+ ++ Sbjct: 424 SVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSAMEQ 483 Query: 446 LMTSLNSTSSYLTQQFENN 464 + LN+ Y+ F N Sbjct: 484 AIQQLNAQGLYIQNAFSNQ 502 >UniRef50_A1TVF1 Flagellar hook-associated 2 domain protein n=4 Tax=cellular organisms RepID=A1TVF1_ACIAC Length = 478 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 117/475 (24%), Positives = 212/475 (44%), Gaps = 32/475 (6%) Query: 13 LDLSSILDSLTAAQKATLTP---ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 ++++ ++ + A K +T +S Q + +K+SA+G LKS ++T A L+ Sbjct: 15 VNVNDLIKASVDAVKLPITRTNGLSQQAAVTNSKVSAFGQLKSLVSTLSDAANKLTSVTG 74 Query: 70 FSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 ++ + TSS+T + + G A A + + V +LA+AQ+ + + A + + Sbjct: 75 WNGVAATSSSTDFVTVSAVGGAAATSFNVQVQNLAKAQSSISDSLTPAKSAVGAGTLTLT 134 Query: 129 TIQQGGDKDPITIDIS-------AANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T G AA +L + IN +KAGV+A+++ +G+ RL + Sbjct: 135 TGTWSGSPKSFAAGADEGVKIDVAATDTLEDVASKINGSKAGVTATVLTDASGQ-RLMLR 193 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 S TG LSVS D S + S + AQNA TVN VA+ + +N Sbjct: 194 SKTTGESAGYQLSVSDADGNNSDAAGLSRLLSGS---TEYAQNANATVNGVAVTSGTNVF 250 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 ++ + +T TT + ++T+T+D S + I+ +V AYN++ + TKY Sbjct: 251 ANTVAGVTFTAVKPTTTDVSITVTKDNSAVKANIQAFVTAYNAVNSALNESTKY------ 304 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS------DGKL 355 D + + G L GDS T+Q L+ L + S + ++L+++G+ + DG L Sbjct: 305 -DKDTKTAGLLQGDSGAVTLQNTLRMALQSVNQSGALRSLSEVGVVSAGGSGNLSPDGSL 363 Query: 356 ELDADKLTAALKKDASGVGALIVGDGK---KTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 LDA K A++ + V A G G + + L++ G Sbjct: 364 TLDATKFDKAMQ-NPDDVKAFFRGADGGSVTDGFAGKFKAVTSRLLASDGFFAGKDQSYK 422 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + L + D ++R ++T LD M+++N+ +SY+ QQ + + Sbjct: 423 EMLKRNAADIERINERASEVEKNLTARYTALDTKMSNMNALNSYIQQQVVAWNKT 477 >UniRef50_A0YG73 Flagellar hook-associated protein 2 n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YG73_9GAMM Length = 479 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 136/488 (27%), Positives = 237/488 (48%), Gaps = 40/488 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+++G GSG+DL +++ L AA++ ++ +++ AK S+ G LKS ++ F+ + Sbjct: 2 GITAIGTGSGIDLETLVTDLIAAEREPREISLNLKETVANAKFSSLGNLKSNVSEFRDSL 61 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +L +SA + TS T+ F+ T NA G YTI V LA A + T + + Sbjct: 62 ASLKDITSYSARTATSGNTSLFTVTAEANANVGSYTIEVNTLANANKVATNASFTSPNST 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 + + G + ++ + L+ +RDAINNA GV+AS+I +G L Sbjct: 122 VGQGTLTIGFLAGS---TFDVTVADTDD-LTAVRDAINNATDNVGVTASLITAASGTE-L 176 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGY-------------DASASSNGMEVSVAAQNA 225 +T+N TG N + +SV + ++ N M+ AAQ+A Sbjct: 177 VITANKTGAANQLNISVIDTGDTTNQDANGLSRLFYDGSDPANSINGVNQMQQIDAAQDA 236 Query: 226 QLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTL-----TITQDTSKAQTAIKDWVN 280 Q+ V+ A +S+N S LE +T+ G TL ++ D + ++ ++++V Sbjct: 237 QIYVDGFAATSSTNEFSTVLEGVTITALADDGGAATLPSANMVVSADKTLIKSGLENFVA 296 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSY 338 YNSL+ + LT Y S+++G L G++ + ++TQ++ +L TV S S+ Sbjct: 297 GYNSLVTVLNELTDYNVA-------SNTSGLLSGETVIAGMETQIRRLLGATVESADSTL 349 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 LA +GI+T+ DG + LD L ++ + S +G L+ GD GI T + L +L Sbjct: 350 NNLALLGISTN-RDGSIALDETALNNTIENNFSNIGTLMSGD---DGIITRMDDLLGGFL 405 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 G+ ++ L+ + R+ RY+ F +LD+L++ LNST ++LT Sbjct: 406 DRGGLFATKEATLTTQLDDVADQRLNLELRLSVIEERYRSAFGKLDILVSRLNSTGNFLT 465 Query: 459 QQFENNSN 466 QQ E + Sbjct: 466 QQLEAAAK 473 >UniRef50_C7RSH1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSH1_9PROT Length = 469 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 143/476 (30%), Positives = 236/476 (49%), Gaps = 40/476 (8%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL------- 64 G+D++SI+ L ++A LT ++ +++ F AK+SA G+L+ A++ QTA L Sbjct: 7 GIDVNSIVTQLMTVEQAPLTALAKKEAGFQAKISALGSLQGAVSALQTAAGNLVPAIGTT 66 Query: 65 SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + + T SA+TA +A+AG Y++ VT LA+ ++ T T + ++ Sbjct: 67 ALQKFSVFKAALGDATIASASTAASAVAGTYSLEVTRLAKQHSIMTATGAATPFSGTGST 126 Query: 125 ---DSKLTIQQ-----GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 KLTI G T A ++ IRD+IN+A GVSA +IN G Sbjct: 127 LPTGGKLTISLDSVPPGASPFKSTDVTIADGATPEAIRDSINSASTGVSAVVIN-GTAGK 185 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 +L +TS+ G + + L SG +L ++ S AAQ + +N +AIE Sbjct: 186 QLVLTSDTAGSNQFIKL--SGIASLAYDPNAVPVPLTDPFVQSQAAQGSAFKLNGIAIEA 243 Query: 237 SSNTISDALENITLNLND-----VTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 ++NT++ AL+ +TL L VT+ + TLTI++DTS + V A N T + Sbjct: 244 TTNTVTTALDGVTLTLLKGPEAPVTSLSTTLTISKDTSSLTAGVNALVKALNDFNSTANG 303 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIGITT 348 L Y D+ + G L GD+TLR+ Q +++ + + + L+ IG++ Sbjct: 304 LGSY-------DAATRKAGTLNGDNTLRSAQNAIRTAFGKVPTDLAGAKLQRLSDIGVSL 356 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 DGK+ +D KL A+ +D GV L+ G T + + + T G+I A + Sbjct: 357 Q-KDGKVTVDTAKLGKAISEDLPGVAKLVAAYGSATKLAA------DTLVGTGGLIAARS 409 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 +G+S ++ L K +A S R+ ARY+ QF+ LD L+ + +TS++L QQ N Sbjct: 410 EGLSASIQNLGKQSDAISSRLTQIEARYRRQFSSLDTLIAGMTTTSTFLEQQLANL 465 >UniRef50_B4RV22 Flagellar capping protein n=2 Tax=Alteromonadales RepID=B4RV22_ALTMD Length = 471 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 123/485 (25%), Positives = 227/485 (46%), Gaps = 41/485 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA+I++ GVGSGLDL +I+ + A L ++++S +L+ G +KS ++ Q Sbjct: 1 MATITNAGVGSGLDLEAIISATLQASNQPKLQKFASRESELEVQLTGIGGIKSVMSKLQD 60 Query: 60 ANTALSKADLFSATSTT----SST----TAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 L+ + F+ + S++ S ++ A G + I+V LA+ T Sbjct: 61 VFEELASPEEFNQRVASVRQPSNSAELGDLVSVSSDKTATTGAFEINVLQLAKGSRAQTD 120 Query: 112 TT-----RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVS 165 T + + TS LT G + I I A S+L IR AIN ++ +G+S Sbjct: 121 ATNPANAFNSADEVVTTSAGILTFTAGENSFDIDI---EAGSTLEDIRQAINSDSSSGIS 177 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQN 224 A+IIN G L + + +TG N + ++ + + S + A + AQ+ Sbjct: 178 ANIINTGTQTL-LVIEAAETGSGNDLVITNNNAELDRLSTVANGGGAGGLEIGAEDQAQD 236 Query: 225 AQLTVNNVAIENSSNTISDALENITLNL--NDVTTGNQTLTITQDTSKAQTAIKDWVNAY 282 A + V+ + I N+SN S+A++ +T+ T + + D I ++++A+ Sbjct: 237 AIIEVDGIQISNTSNVFSNAVQGLTITAERQSETNETANVNVAFDREGVTEKIDEFISAF 296 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTL 341 N+ ID + S+ + L GD+T+R I+ QL + L+ TV + ++T+ Sbjct: 297 NNTIDMIGQQS------------SAVSSPLFGDATVRAIKDQLTNALTTTVGNAGDFETI 344 Query: 342 AQIGITTDPSDGKLELDA--DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS 399 IG++ + +GKLE + L+ AL + S +G L G I T GS L +++ Sbjct: 345 FDIGLSLN-ENGKLEKENVVRSLSEALDTNFSDIGKLFTNPGG---IADTFGSILENYVD 400 Query: 400 TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 ++G++K D ++ + L D R++ + ++++ LD L+ S+ S+ YL Sbjct: 401 SSGVLKQRQDILNLQKDDLEDDRLDHQFRMEQLESSLRKKYASLDTLIASMRSSGDYLMG 460 Query: 460 QFENN 464 Q + Sbjct: 461 QLSSL 465 >UniRef50_A4VJE6 Flagellar cap protein FliD n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VJE6_PSEU5 Length = 468 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 137/479 (28%), Positives = 238/479 (49%), Gaps = 27/479 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+ I+ G+G+GLD+ ++ ++ A+KA I + LSA GTL SA+ TF+ Sbjct: 1 MSGITISGLGTGLDIGGMVTAIADAEKAPKQAQIDRLTTKTETSLSAVGTLTSAVETFEA 60 Query: 60 ANTAL--SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + TAL S + +S+ SAT A+ G Y + V LA + + + + Sbjct: 61 SLTALESSSSSFEGLGVQSSADGVASATAGAGAVPGSYEVEVISLASSSKVASASLEGGA 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINVGNG 174 T + LTI G D + ++ +SL+ IRDAIN+ A AG+SA+II +G Sbjct: 121 STTFDSG-GTLTIDVG-DNASYEVQVAPG-ASLTEIRDAINSQLSATAGISANIITDASG 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA------SSNGMEVSVAAQNAQLT 228 RL ++S TG + + +GD A + + S G A NA Sbjct: 178 A-RLVLSSEVTGEGTDLYVKGTGDLAALNINVDEDGNHDLTQQSGTGAGSITLASNASYK 236 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 ++ + + +S+NT++ AL +++ L G TLT+ +T +T+I+ +V+AYN+LI Sbjct: 237 IDGLELSSSTNTVT-ALSGLSIKLTA--EGTTTLTVAPNTEGLKTSIEAFVSAYNNLITV 293 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGIT 347 ++LT+ T + D S+ GAL+GD+ +R++ +++ L + LAQ+G+T Sbjct: 294 TNALTRVTTSE---DETSTDAGALVGDALVRSLLGSIRNELVQPSTGSGELSVLAQLGVT 350 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 T+ DG L +D KL++AL+ V A VGD G+ + S + + G++ Sbjct: 351 TN-KDGTLSIDDAKLSSALETHYDEVQAFFVGD---DGLIPRLKSVTEPYTAPGGLLAGR 406 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 T+ + KT+ +L++ A RID+ ++ +D+L+ L +TS + +N Sbjct: 407 TESLQKTMTQLSEQQQALDRRIDSLTTSLYTKYNNMDILVAQLQATSESILATLNALNN 465 >UniRef50_Q1GZT6 Flagellar hook-associated 2-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT6_METFK Length = 668 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 133/426 (31%), Positives = 229/426 (53%), Gaps = 25/426 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MAS S + + D+ SI+ SL A ++ LT +S Q++S+ +K+SAY TL+S+L++FQTA Sbjct: 1 MASTSGISASTNFDIDSIVSSLMAVEQKPLTLLSQQKTSYQSKISAYATLQSSLSSFQTA 60 Query: 61 NTALSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + F+ S TS + F+AT++G+A Y I V LAQ+ + T + + Sbjct: 61 LANLSTSSKFNVQSATSGDSAVFTATSSGSATVSNYAIKVGQLAQSHKVATSNFSNTSAA 120 Query: 120 AIATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 + ++ T DK ++ ISA+N+SL+GIRDAIN GV+A+I+N Sbjct: 121 VGTGTITIALGTYDEATNTFTANPDKAAKSVTISASNNSLAGIRDAINAGDMGVTATIVN 180 Query: 171 VG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG---------YDASASSNGMEVSV 220 G +G RL +TS ++G N++ +S++ D + AS + + Sbjct: 181 DGQSGGGRLVLTSKESGEVNSIKVSIADADGDNTDSDGLSRLAYDPAAASGAGKNLVELQ 240 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWV 279 A+NA+L ++ + +E++SN ++ L ITLNL + +L +T++ + + ++ +V Sbjct: 241 EARNAKLNIDGIDVESASNVVTGVLSGITLNLFKASPDTAVSLNVTKNVTAIKDSVTAFV 300 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS-Y 338 NA+N++ T +LTK+ D+ + NGALLGD+T R+I +Q+K L+ +V + + Sbjct: 301 NAFNAVNTTLRNLTKF--DDSTTTAADRKNGALLGDATARSISSQIKMALTKSVGGTDNF 358 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +L+QIG+ DG L LD+ KL A++ + V L G + + T + + Sbjct: 359 SSLSQIGVAIQ-RDGSLALDSSKLEKAIETNLDDVAKLFAAVGSASDVETRFVTQGSKTQ 417 Query: 399 STTGII 404 I Sbjct: 418 PGNYAI 423 Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 31/83 (37%), Positives = 48/83 (57%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + + ++S TG++ + TDG+ ++ ++TK A R+ A ARY+ QF LD Sbjct: 585 GYAAQLNELVKGFVSDTGLLASRTDGLQDSIKRVTKQEEAIQVRLAAVEARYRAQFVALD 644 Query: 445 VLMTSLNSTSSYLTQQFENNSNS 467 VLMT + +T SYLTQQ S + Sbjct: 645 VLMTQMQTTQSYLTQQLAAISAN 667 >UniRef50_A5W0I8 Flagellar hook-associated 2 domain protein n=2 Tax=Pseudomonas RepID=A5W0I8_PSEP1 Length = 470 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 132/483 (27%), Positives = 227/483 (46%), Gaps = 33/483 (6%) Query: 1 MAS--ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTF 57 MAS +SS+G G+GL+++ ++ +L A A I+ Q S+ TA +S G+L+SALT F Sbjct: 1 MASTLVSSIGQGTGLNITEMVAALVNADTAAKKAQITRQTSNNTAMISGVGSLRSALTAF 60 Query: 58 QTANTALSKADL--FSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR 114 Q A L+ + F+A + S + + T A+AG Y I V LA + + Sbjct: 61 QDAMAKLNSSTSPAFNAYAAKSANESVVKVTAGNTAVAGSYDIVVNKLATGSKVASAPIA 120 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVG 172 + + LTI+Q G+ + + +SL +RD IN A G+SA+I+N Sbjct: 121 GGAAATV--TGGTLTIEQNGNTYELEV---EDGASLQSVRDQINKELAVQGISANIVNGK 175 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 +G RL +S TG D + +S + G + + ++ AQ+A+LT++ + Sbjct: 176 DGA-RLVFSSTTTGADTDLMVSGVPE---LEIDGTQQMSDTGAGFITAMAQDAELTIDGL 231 Query: 233 AIENSSNTISDALENITLNLNDVTTG------NQTLTITQDTSKAQTAIKDWVNAYNSLI 286 + N NTI+DA+ ITL L V+ ++++QD + +++ +V+AYN+L Sbjct: 232 VVTNKKNTITDAISGITLELTGVSARSGADGVPTNVSVSQDNDGLRKSVQSFVDAYNTLQ 291 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGI 346 T ++LT T + + S G L D T R++ ++ +LS + TL+Q+GI Sbjct: 292 KTITALTTSTRDED----DNLSLGPLSNDPTTRSLVNDIRKVLSEVGAGDQLTTLSQLGI 347 Query: 347 TTDPSDGKLELDADKLTAALKKD--ASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 T DG LE ++ K TAA+ S V L G G+ + + + ST G + Sbjct: 348 NT-TKDGTLEFNSTKFTAAMNDKKLGSEVQELFTGS---NGLIERMNKAIDPYNSTDGSL 403 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K L A R +A +++ +D + LN+ + + F+ Sbjct: 404 ATRKSNLDKVAKNLADQQTALDRRTEALTESLTKKWVAMDTAVAKLNAQADQIKSVFDAI 463 Query: 465 SNS 467 + Sbjct: 464 NAQ 466 >UniRef50_B8HEL3 Flagellar hook-associated 2 domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEL3_ARTCA Length = 444 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 109/467 (23%), Positives = 201/467 (43%), Gaps = 38/467 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++ G+ SGLD +++++SL + A I + ++ ++SA L SA+ T Sbjct: 2 GLAIDGLSSGLDTTTLINSLMTLEAAPQNLIKTRAAAVQNRISALQGLNSAVADLATKAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L++ + TSS+ + A G +V+ LAQ Q T+ A Sbjct: 62 KLAEPKGLELYTATSSSPKVTIAVGAGAKPGTVDFTVSQLAQMQVSVTKNLS-------A 114 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 D+ LTI K ++ +++SL + A+N + AGV+AS I+VG GEYRL S Sbjct: 115 WPDTTLTITGQDGKAT---SVTPSSTSLDDVVSAVNASGAGVTASKISVGGGEYRLQFAS 171 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV-----NNVAIENS 237 TG T+S G A + AQ+AQ+ + + + Sbjct: 172 AKTGAAGGFTVSGLGGPA--------------DLTTVQTAQDAQIKLWTGTSAEATLSSP 217 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 +NT +D L+ ++ +++V+ +T+ +D ++ A D V+ N ++ S+ T Sbjct: 218 TNTFADLLQGVSATVSEVSATPTRVTVVRDNAQISRAATDLVSTANGVLAQISTKTAVVT 277 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 A + +S G GDS +RT+ T + + S + ++ ++ GI+ G +E Sbjct: 278 STDAAGNPITSAGIFTGDSAIRTVSTAVLAAASAPIGG---RSPSEFGISV-TKTGTVEF 333 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 DA K + AL KD +G A + + S+ G+I G T Sbjct: 334 DATKFSEALAKDPAGTMAAVSTIAGRVASAAKQASD-----PVNGLISTKIKGQQSTAKD 388 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + DR+ + + ++ L+V ++ + + S++L+ Q Sbjct: 389 YAAQIESWDDRLQTRRETLQRTYSALEVALSGMKAQSAWLSSQLAGL 435 >UniRef50_A1RF91 Flagellar hook-associated 2 domain protein n=4 Tax=Shewanella RepID=A1RF91_SHESW Length = 448 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 116/473 (24%), Positives = 212/473 (44%), Gaps = 48/473 (10%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISN-QQSSFTAKLSAYGTLKSALTTFQTANTALSKA 67 + SG++ + L A +A + + ++ +L AY L++ + T + L Sbjct: 1 MISGMNAAQFAQQLIGADRAGKDTLYKGKLTASKTQLDAYTLLENNMKKMATKLSELG-G 59 Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 D + T + +AT +A G Y +SV LAQA LT + ++ + + Sbjct: 60 DAAKSKIATVTGENATATVKSDAPKGNYDLSVHKLAQAHQLTKAYSSENE---LLPTSGV 116 Query: 128 LTIQQGGDKDP-ITIDISAANS----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 ++IQ G D + ID++ N S+S +RD IN GV AS++ GN + + Sbjct: 117 ISIQVGSDPTKRMEIDLATVNGGAAISVSQLRDLINKQAGNPGVQASLVRTGN-QIEFML 175 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S ++G+ N M + +G D GM AQ+A+LT+N + I +SSN Sbjct: 176 SSKESGVANQMKVEFNGADW--------------GMTERRVAQDAELTLNGINITSSSNY 221 Query: 241 ISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 + + ++ ++L L V ++ + +T D + A+KD+V+++NSL+ + LT+ V Sbjct: 222 LENVVDGVSLELVKVHAAGESSMIKVTDDFEANKKAVKDFVDSFNSLMTQINQLTRSMGV 281 Query: 299 DAGADSQSSSN-------------GALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG 345 S + G L GD+++R +Q++L+ + T ++ L+ IG Sbjct: 282 KTSDSGTSDKDKEDKTTAVSEAQIGVLKGDTSIRLLQSRLRDSVFATAANG--MRLSDIG 339 Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 I DGKL++D KLT + K D V A+ G +I L + G I Sbjct: 340 IEI-GRDGKLKIDDAKLTDSFKSDPEKVQAMFTGPDS---YVKSIEKTLKPFTQFNGYID 395 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + ++K + + +++ + Y QFT ++ + NS S + Sbjct: 396 QKQEALNKQIKSVNDSMARHDYQMNQKYQIYLAQFTAMESTINQFNSASQLFS 448 >UniRef50_Q1ZCP1 Probable flagellar hook-associated protein 2 (Filament cap protein) n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZCP1_9GAMM Length = 687 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 141/487 (28%), Positives = 229/487 (47%), Gaps = 44/487 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M+S++S G+GSGLD+++I+ ++ A+K L+ I+ + + TA +SAYG L L F++ Sbjct: 1 MSSVTSTGLGSGLDINAIVGAIVGAEKDPALSKITKEDAKATAIISAYGLLNGDLDDFKS 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAG-NAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + L+ + FSA S +SS T+ T G A G + + AQAQTL + + Sbjct: 61 SYKDLAYSSTFSAASASSSDTSILDTKLGVGAQTGTWQFEIKQKAQAQTLVSGANSSFSS 120 Query: 119 TAIATSDSKLT------------IQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSA 166 + ++ D+ I I N+SL G+R+ INN V+A Sbjct: 121 VKDPIGEGVISLRFGAYNEDGSDFSVNADRPIEKITIDGKNNSLEGLRNTINNGDYSVNA 180 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDAL-----QSFMGYDASASSNGMEVSVA 221 SIIN GN YRL +TS TG +NA+ ++V+ + + + +A+ +E + Sbjct: 181 SIINDGNN-YRLVLTSKTTGKENALEITVADANGDALPSSNALNNFTYTATQKNLEQTSL 239 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWV 279 AQ+A + +N + I SN I+ +E +TLN+N T TL I D SK + I+ +V Sbjct: 240 AQDAIIVMNGIQITRDSNEITSVIEGVTLNINGETAPGKKVTLKIDADNSKVKEQIEAFV 299 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SS 337 YN+ + LT Y A + G L GDST+R I++ ++ +L+ V S Sbjct: 300 ENYNATFAKMNELTSYKGAKADNN------GVLNGDSTIRNIKSMMRGVLNTQVKHIQGS 353 Query: 338 YKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIG---SNL 394 + A +GI T DG LEL++ K ALK D G+ G + + S Sbjct: 354 IHSFADLGILT-KRDGTLELNSSKFEDALKNDMQGIADFFTATGVASDTLVSFDKNSSLT 412 Query: 395 TSWLSTTGIIKAATDGVSKT--LNKLTKDYNAASDRIDAQVARY--------KEQFTQLD 444 I+K AT K ++ LT N+ +D ++ Y ++ + +D Sbjct: 413 KPGTYDVEILKLATQATLKDGLVSSLTPSVNSGNDTFKMRIDGYLSEDIVLSQKTYASID 472 Query: 445 VLMTSLN 451 L T + Sbjct: 473 DLATEMQ 479 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%) Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 II D + K + L + R+D AR + F +D ++ + +T + L + Sbjct: 620 IIDGKVDSLYKKIALLDTRKESLIYRMDKLEARLYKNFNAMDSAVSMMGNTMTNLKNSLK 679 Query: 463 NN 464 Sbjct: 680 AL 681 >UniRef50_Q88ES7 Flagellar cap protein FliD n=1 Tax=Pseudomonas putida KT2440 RepID=Q88ES7_PSEPK Length = 452 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 135/471 (28%), Positives = 232/471 (49%), Gaps = 27/471 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAK-LSAYGTLKSALTTFQT 59 MAS + G+GSG+D SI+ +L A+KA Q T +SA G +K+AL TF++ Sbjct: 1 MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60 Query: 60 ANTALSKADLFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A L+ + F+ + T+S AT +A AG Y + VT LA + +TT Sbjct: 61 AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVS 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 + + S T+ + I ++L +RD IN G++A+I+ G Sbjct: 121 SVVNNSGDPQTLTISQSSADYNVTI-PDGATLQQVRDLINKQLGSQGINANILTDAKGS- 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL ++S+ TG + +TLS S+ AQNA+ T++ + +E+ Sbjct: 179 RLVMSSSTTGEGSDITLSGD-------------SSLVQNATPGAPAQNAKYTIDGLELES 225 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SNT++ A+ + L G L++ +T+ +T+++ +V+AYN+LI ++ TK T Sbjct: 226 KSNTVTGAISGVNFELLA--EGKSRLSVATNTTTLKTSVQSFVSAYNALITAINTQTKVT 283 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 A D+ +++ GAL GD+T+R + + +++ L + + S L+Q+GI TD G L Sbjct: 284 ATG---DASTTTAGALTGDATMRALVSTVRNELVKSTGAGSISMLSQMGINTDQQTGLLV 340 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 LD K A+ K A+ + A+ GD G+ + + ++ TTGI+ T ++ L Sbjct: 341 LDDTKWDKAVAKGAADIAAVFTGD---KGLIKRMTAATDAYTGTTGILATRTKNLNDNLT 397 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 +LTK A RI+ A ++ +D L+ LN+TSS + + + Sbjct: 398 ELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSSSVMTTLNAMNKA 448 >UniRef50_A4XK51 Flagellar hook-associated 2 domain protein n=2 Tax=Clostridia RepID=A4XK51_CALS8 Length = 540 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 109/529 (20%), Positives = 184/529 (34%), Gaps = 80/529 (15%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 G+ SGLD SI+ L + QKA + Q + Y + +++F+ L Sbjct: 23 RIGGLASGLDTDSIIQGLMSIQKARYNKLYQQHQLLQWQREDYMNMAKEISSFRDYIFNL 82 Query: 65 SKADLFSATSTTS---STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + F T + T NA+ G Y I++ +A+ T+ Sbjct: 83 KLSSNFVKFKATGPAIDGGYINVTGTANALEGNYEITINSIAKPSTMVLSNISATFDKLK 142 Query: 122 ATSDSK----------------------LTIQQGGDKDPITIDIS---AANSSLSGIRDA 156 + + S L+ Q D ITID++ ANS + + Sbjct: 143 SNNISTLYVSISTQTDADINTLDYVTVKLSTTQPSTSDYITIDVTKFSDANSFAAELVSK 202 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM 216 +N+ VSA + +L VT+ TGL + L + D++ Sbjct: 203 LNSTGT-VSAYYDST---LGKLLVTTKQTGL---IELKLDRTGDQNLSDLTDSTTQGTNA 255 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAI 275 EV++ + +T +++ +S + + + LN T G T+++D I Sbjct: 256 EVTINDLSRNVTYSSLKYSRNSFSF----LGMVITLNKDTAGTKVGFTVSKDIDAIVNNI 311 Query: 276 KDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTL 318 KD++N YN L+ S + D +++ G L D L Sbjct: 312 KDFINKYNELVSKIYSKITEKRNRDYPPLTEDQKAQMKEEDIKKWEEAAKKGLLNNDPIL 371 Query: 319 RTIQTQLKSMLSNTVSS--SSYKTLAQIGITT----DPSDGKLEL-DADKLTAALKKDAS 371 + ++ L V SS + + GI T + +GKL + D KL A+ + Sbjct: 372 SSFLNNMRYYLYKAVPGLPSSLDVITEAGIETFSYFESKEGKLYIKDEGKLREAISNNLD 431 Query: 372 GVGALIVGDGKK-------TGITTTIGSNLTSWLSTTGIIKAA---------TDGVSKTL 415 L GI L + K L Sbjct: 432 AFVKLFTYTDSDPDTPIENQGILQRFYKLANDTLKKIYDTAGKPYFTSYYDPNSYIGKQL 491 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + NA +R+ RY QFTQL+ L+ +N+ SS+L+QQF Sbjct: 492 RSIADQMNAEQERLKQIEDRYYRQFTQLERLIAQMNTQSSWLSQQFSGK 540 >UniRef50_Q4KG76 Flagellar hook-associated protein 2 n=4 Tax=Pseudomonas RepID=Q4KG76_PSEF5 Length = 484 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 135/483 (27%), Positives = 238/483 (49%), Gaps = 30/483 (6%) Query: 7 LGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G+GSGLD +I+ +L AA KA I ++ +A +S GTL+S L+TFQ+ + Sbjct: 9 TGLGSGLDTGAIVKALVAADKAAKQGQIDRATTTNSASISGIGTLQSLLSTFQSTLSVAG 68 Query: 66 KADLFS-----ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + +T+S + AT A+AGKY+++V +LA + + + +A Sbjct: 69 LGSSVNPAFAGFAATSSDSKTVDATADNYAVAGKYSVTVKNLATSSKVASAAFSGGNTSA 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK----AGVSASIINVGNGEY 176 I L I Q G P+T+ AN++L +RD+IN AG+SA+I+ G Sbjct: 129 I--PSGTLNITQNGINYPLTV---GANATLQSVRDSINADSKMNMAGLSANIVTDSFGS- 182 Query: 177 RLSVTSNDTGLDNAMTLSVSG----DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 RL + S TG +++S D + +++++ + A++A +V+ + Sbjct: 183 RLVIGSEKTGAGTDISVSGIAGLEIDGTQPMSSDTNPASAASSGNIGGLAKDAVFSVDGM 242 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + + +NT++ A+ + LNL TT T+T+ +T +T+I+ +V+AYN++ + ++L Sbjct: 243 QLTSKTNTVTQAISGLKLNLVAPTTTPITVTVATNTEGLKTSIQKFVDAYNAVANGITTL 302 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 TK + D+G + + L GDS R+I +++ LS T + LAQ+GITT+ Sbjct: 303 TKPSLDDSGNPTIPAQ---LTGDSLPRSILAAIRAPLSETGAGDKLTVLAQLGITTNQKT 359 Query: 353 GKLELDADKLTAALKKD--ASGVGALIVGDGKKTGITTTIGSNLTSWLS-----TTGIIK 405 G L+ D K TAA+ V L GDG G+ + + + + T GI+ Sbjct: 360 GALDFDDKKFTAAMTDKKLGGEVQKLFTGDGTNPGLLERMTNAIKPFTQGVGSMTEGILT 419 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 T + T KL+ +A R+ A +++ +D L+ L +T+S +T FE + Sbjct: 420 TRTKTLDITKKKLSDQQDALDRRVATLTAVLTKKYNDMDTLVGKLKATASNITSMFEALT 479 Query: 466 NSK 468 + Sbjct: 480 AQQ 482 >UniRef50_C0GW17 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GW17_9DELT Length = 577 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 97/474 (20%), Positives = 194/474 (40%), Gaps = 55/474 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I G+GSG+D I++ + + + + K+ A L++++ + ++ Sbjct: 7 GQIRFDGLGSGMDFDQIVNQMVQIEGRRIQRLQQDMQQEQVKMEASQELQNSMVSMRSEM 66 Query: 62 TALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +++ D F S S + SA+ +A G Y + V LA+ + + ++T Sbjct: 67 DSMNTLDDFFIRSAESGQESVASASADSSAEEGSYNLEVGQLARNHIMFSNEGFEETDDV 126 Query: 121 IATSDSKLTIQQ-----GGDKDPITIDIS-AANSSLSGIRDAINN--AKAGVSASIINVG 172 + +S T G+ +D+ ++L G+ + IN GV A++IN G Sbjct: 127 VNSSGETRTFSYQYGPEEGEDAHERVDLEVPEGTTLQGLVELINEDPDNPGVRATLINDG 186 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 N EY L + D G D + + D ++ + S AQN+++ V+ Sbjct: 187 N-EYFLQLKGMDQGADYKVEIKDEETDLD--------GFKADDFDTSQEAQNSKIKVDGW 237 Query: 233 ---------------AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 IE SN++ D +E +TLNL + TG +T++ D + +++ Sbjct: 238 PRDEVDEDGEVTEERWIERDSNSVDDVIEGVTLNLYE--TGETQITVSDDHEAIKEQVQE 295 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSS--SNGALLGDSTLRTIQTQLKSMLSNTVSS 335 +V++ N+++ +++ + D + L G+ +R +Q +++ +L++ Sbjct: 296 FVDSVNNVLAMMQGVSRIEEDEEAEDDDMAGPQTSLLTGNYGVRMVQDRIRDVLASAGVG 355 Query: 336 SS-----YKTLAQIGITT-----DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 + L IGI+T + G L LD +L L +D V + D + + Sbjct: 356 FDRDDDPFPNLGSIGISTVTDEEEEDYGLLRLDESRLDEVLDEDPQAVAEIFSADNEPS- 414 Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 T S+ G + VS T+ ++ + ID + AR+ Q Sbjct: 415 ---TDTSDFRFASQIEGTTRPGLYDVSYTM----ENGEITNAYIDGEEARFDNQ 461 >UniRef50_C0QRT8 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Persephonella marina EX-H1 RepID=C0QRT8_PERMH Length = 442 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 111/471 (23%), Positives = 184/471 (39%), Gaps = 48/471 (10%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA I + D ILD + + + + +++ +K A ++ + Q Sbjct: 1 MAGEIYFSNLAGNFDYQQILDQVQYIKSQQILLLQEREAHIQSKKDAITNYRTLIKDLQG 60 Query: 60 ANTALSKADLFSATSTT-SSTTAFSATTA--GNAIAGKYTISVTHLAQAQT-LTTRTTRD 115 L LF+ S + S TA S T ISV LA+ LT D Sbjct: 61 IFEDLVSPTLFAEKSVSISDETALSVTITDPTQVSESNLDISVLQLAKNDVWLTGGGVAD 120 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN----NAKAGVSASIINV 171 + S LT+ G I D SL I D +N + A +SAS+ Sbjct: 121 KNAAITSLSAGSLTVSYQGTDYTINYD---NTDSLQSIVDKLNTQFQSNNANLSASLFFD 177 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 G YRL + DTG N +T++ S A G AQNAQ+++ Sbjct: 178 GVN-YRLMIKGLDTGAGNTVTITDSLTGAGSLTDAL------GGFNNVQTAQNAQISIYG 230 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 +E+S+NT L + + VT +TI +D + ++++++ YN ++D + Sbjct: 231 TTVESSTNTFDSVLPGVVIEAKSVTASPVNVTIGKDYQPFKDKLQEFISKYNEIVDFVQT 290 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIG-ITTDP 350 T G L GD TL++I++Q+ + L+ L ++G I D Sbjct: 291 NTS-------------KEGVLSGDYTLQSIRSQIFNGLTP---------LMELGIINVDK 328 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 G L +D +L L+ + S V K + + + S L G +K+ G Sbjct: 329 DTGHLSIDNTELDNKLQTEPSTVQ------TKISDLDNNLRDYFYSVLDPYGPLKSKEKG 382 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 + + + K + RIDA++ ++QF L V M + L+ F Sbjct: 383 YDRQIEAIEKKIEIDTKRIDAEIEILRKQFIALQVYMAEMEDLRLRLSSLF 433 >UniRef50_UPI00016A70B9 Flagellar capping protein n=1 Tax=Burkholderia oklahomensis C6786 RepID=UPI00016A70B9 Length = 418 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 109/445 (24%), Positives = 182/445 (40%), Gaps = 38/445 (8%) Query: 33 ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATST-TSSTTAFSATTAGNAI 91 + Q L AL F+ AN L K + S S+ AT A NA Sbjct: 1 MKKQIDRNNVYSKGLKALDDALKAFRKANEELVKGGSVTRNSVWLSNDAIAKATAAPNAK 60 Query: 92 AGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGD-KDPITIDISAANSSL 150 G Y V LA A ++T+ G + I +L Sbjct: 61 PGAYDFYVRQLATANQRVVNLPASIK--TGGAGSFEITLNDGTKCRVDIEALGKDGKETL 118 Query: 151 --SGIRDAINNA---KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM 205 + AIN V A ++ +L +TS +TG N T+ SG + Sbjct: 119 TPEELARAINGNRELDGKVRAEVV-----SGKLVLTSAETGEQNGFTIDASGLNDPDLKQ 173 Query: 206 GYDASASSNGMEVSVAAQNAQLTV---NNVAIENSSNTISDALENITLNLNDVTTGNQTL 262 ++++ + + AQ+A + + N V I+ SN + +++E +T+ N TG T+ Sbjct: 174 AFESA------KETSKAQDAIILLGGENGVEIKQPSNVL-NSIEGLTITFNK--TGAVTV 224 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 ++ D + ++ +V+AYN+L+D F LT+ AG + + + G L D+ +R + Sbjct: 225 KVSADKEETVKGVRAFVDAYNALMDEFEKLTR-----AGNEKNNEAGGPLEADAGVRALI 279 Query: 323 TQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 +Q+K+ L ++ L ++GI TD G+L ++ L A+K L K Sbjct: 280 SQIKNTLRKSMDGV---RLHELGIETDRK-GRLSINESALDKAMKDSPEKFDKLFG--NK 333 Query: 383 KTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 TG+ + L +WL + G +K + V +L + R D +Y +QFT Sbjct: 334 STGLAGNFDALLDTWLDASKGQMKKRMESVEHNEKRLDAQTDDLKRRYDQVYNQYVKQFT 393 Query: 442 QLDVLMTSLNSTSSYLTQQFENNSN 466 L L +LNST L F +N Sbjct: 394 ALQALQANLNSTLKRLDDLFSTKNN 418 >UniRef50_B2A823 Flagellar hook-associated 2 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A823_NATTJ Length = 531 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 95/525 (18%), Positives = 184/525 (35%), Gaps = 74/525 (14%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ +G D +++ L ++ + A+ + L+ + Sbjct: 1 MRLGGLATGFDTENLVKQLAELERQPIQRHEQDIQEIEGVKDAWRNVNKLLSGVSDELSG 60 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 L D F +S+ + A+ Y + AQ Q L + T ++ + Sbjct: 61 LQSEDTFQGMEASSTNENIEVSADNQAVEADYAFEIQQKAQNQRLASLDTINNVENEDG- 119 Query: 124 SDSKLTIQQGGDKDPITIDISAANSSLSGIRDA--------INNAKAGVSASIINVGNGE 175 LT G ++ I +D + ++ I D ++ + A++I E Sbjct: 120 HKGTLTFDFGDEEFDIKVD---ESDTIQDIADKINNNEIENNDDKTIPMGATVIAGEYLE 176 Query: 176 YRL--SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGME------------VSVA 221 + + + DN GD L ++ DA ++ E Sbjct: 177 FNIDEGYELENIEADNEEKADNDGDSDLLGWLQLDADIKNDDEENNDVNEDDREVLQVQE 236 Query: 222 AQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGN----QTLTITQDTSKAQTAIK 276 +QNA++ VN + IE+S+N I A + + ++++ T + +T++I+QDT ++ Sbjct: 237 SQNAKVIVNGIQGIESSTNEIEIA-DGVEVDISAATESDMEIQETISISQDTETLINNVE 295 Query: 277 DWVNAYNSLIDTFSSLTKYT--AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-- 332 + YN I T T D + +G L GDSTL I L+ +++ Sbjct: 296 SFEENYNEAISAIEDKTDVTVLEDDTQEGEEEVQSGVLQGDSTLNNITNNLRRAITDPVD 355 Query: 333 -------VSSSSYKTL--AQIGITTDPSD-----------GKLELDADKLTAALKKDASG 372 V + L A GI +L +D D+L L+++ Sbjct: 356 VSDQDIEVDGNEVDELVPAHFGIEIGGDTVAGGSYSGADANELTIDYDRLEEQLQENPEA 415 Query: 373 VGALIV--GDGKKTGITTTIGSNLTSWLSTT----------------GIIKAATDGVSKT 414 V AL G+G GI + L + +I+ + Sbjct: 416 VQALFANDGEGGGEGIAVRMEEYLDGVVYDGELDSTGLRNQTQDQNQSVIENRLTTEANE 475 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + + + DR + + + QFT ++ + S + S L Q Sbjct: 476 IERTESRIDTIEDRAEMREEQLWSQFTAMEEGIQSAQAESQSLMQ 520 >UniRef50_C7R0K8 Flagellar hook-associated 2 domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0K8_JONDD Length = 449 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 100/464 (21%), Positives = 190/464 (40%), Gaps = 39/464 (8%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+S G+ SGLD +SI+D + T + +Q + ++A L + +++ Sbjct: 2 SMSIGGIASGLDTASIIDQFMQVEAIPRTQLQTKQKTTETFVAALQALNTKVSSLTENAA 61 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 K+ F T+S+ + + +T A AG V LAQ ++ + D + Sbjct: 62 KAMKSASFDVWKGTASSDSVTVSTGTGAAAGTLEFRVDALAQGKSTLSGVLADASSLL-- 119 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-NAKAGVSASIINVGNGEYRLSVT 181 + TI +G T I+ +SSL+ + AIN +A++GV A+I+N +G RL +T Sbjct: 120 -TGGDFTITKGDGS---THTITPVSSSLADLASAINSDAESGVKATIVNTTDGS-RLQLT 174 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT------VNNVAIE 235 + TG + + + G AQ+AQ+T + + Sbjct: 175 ATKTGATDG-------------AFTITSGTAEAGFSSIRGAQDAQITLWPSLGLPGSTVT 221 Query: 236 NSSNTISDALENITLNLNDV---TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 ++SNT SD + + + + V T T+ + +DT + V N +I+ +S Sbjct: 222 SASNTFSDVMAGVNVTVTKVSAPTDDPITVDVAKDTEAVSKLANNLVAQLNQVINEVASR 281 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD 352 +K T + Q+++ G GDS R + ++L S V ++ ++IGI D Sbjct: 282 SKVTTSTGSSGQQTTTGGLFTGDSATRQLVSRLTEAGSYAVDG---RSPSEIGIEI-TRD 337 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 G + +K A D +G A + + S+ G + Sbjct: 338 GTFTFNEEKFQEAFAADPAGTQAFLTAVATRVENVGKATSD-----KYDGSLTLRVQSQQ 392 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 + + R++ + A Y + +T L+ +++L S ++ Sbjct: 393 SLVRDYGTQIESWDRRLEQRRANYVQIYTALESALSNLQSQGTW 436 >UniRef50_A6F9P0 Flagellar distal capping protein-like protein LafB n=1 Tax=Moritella sp. PE36 RepID=A6F9P0_9GAMM Length = 450 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 119/443 (26%), Positives = 206/443 (46%), Gaps = 29/443 (6%) Query: 13 LDLSSILDSLTAAQKATLTPIS-NQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 +D +S L AA +A L + QQ++ K+ A+ L + TA LSK+ Sbjct: 3 IDPASFSSQLVAATRAGLDKHNNTQQATVNNKIRAFKALDGKVDNLSTALKDLSKSSDLR 62 Query: 72 ATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 AT T SS A+T AI G Y+I V+ LA+A + ++ + D LTI Sbjct: 63 ATDTKLSSEGIIKASTTDGAIVGDYSIEVSQLAKADRIGLTFADENWQP---PRDGSLTI 119 Query: 131 QQG--------GDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + G G + + AN++L +R+AIN+A GV ASII G +L + Sbjct: 120 KLGPDPDPTGSGKSITLDLSTLPANANLMDLRNAINSAADNPGVQASIIRTGTD-VKLVL 178 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S +TG + + +++SG + + + AQNA+LT N +AI + SN Sbjct: 179 SSEETGTAHKLDITLSGGTSGA---YTELDTALTNQTQLSTAQNAKLTFNGIAITSQSNK 235 Query: 241 ISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + + +N+TL L G LT+ +D +++ V+AYN L+ + T + Sbjct: 236 LENITDNLTLELTKTNVGEPLRLTVGRDDDAITKSLESLVSAYNGLMGRVKTAT--ISKV 293 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 +++ + L GDST ++ QL+S+ SN L Q+G+ D +G++ LD Sbjct: 294 ETGATKNITRAPLSGDSTASSMMRQLRSVFSNLPDGG---YLGQVGLKFD-KNGEISLDK 349 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 + L +L KD + +++G K GI + + L + + GI ++ +++L Sbjct: 350 EALAKSLDKDPDILNNMLLG---KDGIVDRLSTTLKPYSQSKGIYDNRVSSLNSEIDRLQ 406 Query: 420 KDYNAASDRIDAQVARYKEQFTQ 442 ++++ RY +QFT Sbjct: 407 DKTAQLDVQMESLYQRYLKQFTA 429 >UniRef50_B8DS94 Flagellar hook-associated 2 domain protein n=5 Tax=Desulfovibrio RepID=B8DS94_DESVM Length = 577 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 109/490 (22%), Positives = 201/490 (41%), Gaps = 48/490 (9%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + G+G+G D S ++D L + ++ ++ ++ + + A+G L++ + + + Sbjct: 7 GGVYFSGLGNGTDFSKVIDQLKSIEQIPQKRLTLWKADWQRRQDAFGELRTEIASLKDIV 66 Query: 62 TALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++S + F + +SS T SATT + + G Y I V LA + T T D KT Sbjct: 67 DSMSTMNKFLVKTGSSSAETVASATTDSSVLEGNYKIEVGQLASSSIWTYNTAFADKKTK 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRL 178 + S S +I + + +++ +++ INN GV A ++ G G Y Sbjct: 127 VNDSGSDQQFVYTYMGKTRSITV-PSGTTIDALKNMINNDPQNPGVKAMLVQNGTG-YTF 184 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAI 234 D G + +++ + A+QNA+ VN + Sbjct: 185 QFRGMDLGANATLSVDSGTTVTGLP--------GTAATWTVQASQNAKYRVNGWPAATWL 236 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 E++SNT++ A+E +TL L DV G +++ DT K + +K +V+A N++ LT Sbjct: 237 ESASNTLTGAVEGMTLTLKDV--GTTQISVATDTEKIKENVKSFVDAMNAVRSKIKELTA 294 Query: 295 YTAVDAGADSQSS-------SNGALLGDSTLRTIQTQLKSMLSNTVS------------- 334 + + + L G+ ++ + TQLK ++ + Sbjct: 295 VNSSKDVDNPDDASSLYSMQKGSILTGNYGVQLLSTQLKMATADRAAGFEYQYKDGNLLR 354 Query: 335 SSSYKTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 + +LA IGI T+ G LELD KL LK + + V L DG + + Sbjct: 355 GDEFSSLAHIGILTNAETNSLNAGLLELDEAKLDEVLKNNPTAVAELFAADG----LPES 410 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 S+ + + G+ KA V+ ++ NA A + +Q T ++ Sbjct: 411 DSSDFSYYSHVKGVTKAGIYDVTYDVDASGNIVNAFIGGKRANIDNANKQITAMEGDARG 470 Query: 450 LNSTSSYLTQ 459 L L+Q Sbjct: 471 LALQIDNLSQ 480 Score = 42.7 bits (99), Expect = 0.032, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 31/73 (42%) Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + L+ L + G +K D ++ + K + DR+ R + ++++L+ + Sbjct: 497 LSEQLSDMLGSDGALKILEDNYQDIMDDIQKKIDKEVDRVTQWERRERLRYSRLEATLAR 556 Query: 450 LNSTSSYLTQQFE 462 ++ + Q + Sbjct: 557 YDALGKSVESQIK 569 >UniRef50_A8UWS8 Flagellar hook associated protein FliD n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UWS8_9AQUI Length = 443 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 100/471 (21%), Positives = 190/471 (40%), Gaps = 40/471 (8%) Query: 1 MAS-ISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA + G+ G+ D +I+D + + L + +++ AKLS+ G L + F Sbjct: 1 MAGELFLSGLTGTNFDGGAIVDQIMQLRSLPLQRLQQEKALVQAKLSSLGNLSKGIGDFL 60 Query: 59 TANTALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 + L LF A +T+S+T +A +A ++++V L+QA+ + D Sbjct: 61 SIFEGLDVDALFKAKQATSSNTDVLTAAATDDAPNLSFSVTVNKLSQAEIRVSNGGVSDL 120 Query: 118 KTAIAT-SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 A+ +T G + ID +A + +L + DAIN+ + V AS+ G Y Sbjct: 121 SNTFASSGTLTITYDTGNGTETFNIDYNAGD-TLEDLVDAINSTQERVKASVYYDGT-SY 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN-NVAIE 235 +L ++ ND G T +G + S +G++ AQNA++ + + Sbjct: 179 KLMLSENDVGASTVET--DTGTGVYVISVSGLPSELGSGLDTLQKAQNAEIVIGTGSPVT 236 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 + N D + +T+ + D TG+ +T++++ SK + + D+V YN L+ SLT Sbjct: 237 SPDNKFEDVISGLTIEVKD--TGSANVTVSENYSKVTSFLNDFVKKYNGLVRLVDSLT-- 292 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 + GD T+ +++T + LS + I D G++ Sbjct: 293 ----------TGEQALFRGDYTIGSVKTGIAERLSPLIDKGL--------IEYDGDTGEI 334 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 L+ DKL L D GV ++ I GS + + S+ + Sbjct: 335 SLNTDKLNELLNTDPEGVKSI---------IEELKGSYSAYLEGQKDLFSSFEKTYSEQV 385 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + + R+ + + ++ QL+ + Q + S Sbjct: 386 EDIDNRIQSLAQRLVQEEKLLRREYAQLEAFIAQAEELRQRFQQFMVSLSK 436 >UniRef50_A4A604 Flagellar hook-associated protein 2 (Filament cap protein) n=2 Tax=unclassified Gammaproteobacteria RepID=A4A604_9GAMM Length = 680 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 118/421 (28%), Positives = 217/421 (51%), Gaps = 36/421 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++ G+GSGLD+ ++ SL A++A + Q++ T++LSA+GTL+ AL+ Q++ Sbjct: 2 VAATGIGSGLDIEGLVTSLVNAERAPAENRLLTQEAELTSELSAFGTLQGALSGLQSSVA 61 Query: 63 ALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L+ + F+ S TSS A S + + NA Y I V LAQAQ+L + + T T Sbjct: 62 GLTNQNTFNQRSATSSNAAAVSVSASTNAAPSSYQIQVDQLAQAQSLASGSFTSLTDTVG 121 Query: 122 AT------SDSKLT------------IQQGGDKDPITIDISAANSSLSGIRDAINNAKAG 163 + T D+ ++ I ++N++L G+ DAIN A G Sbjct: 122 EGTLTFRFGTTDYTPAADLNPANYNGFTVNADRASASVTIDSSNNTLQGLSDAINEADIG 181 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG-----YDASASSNGMEV 218 V+A+I+N G G +RL ++S TG N++ + V +AS++ +E Sbjct: 182 VAAAIVNDGTG-FRLLLSSEQTGASNSIEVQVDDTGDGLDNDNEGLSRLAFNASADNLEQ 240 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 +VA Q+A ++N +++ + +N++++ ++ ++L L D T TL+++++TS ++AI + Sbjct: 241 TVAGQSAAFSINGLSLSSETNSVANVIDGVSLTLRDTTDTPATLSVSENTSAVRSAIDGF 300 Query: 279 VNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--S 336 V AYNS + T ++LT + ++++ + L GD T R++ Q++S LS++ Sbjct: 301 VTAYNSFVSTANNLTAF-------NAETGAAAPLQGDFTARSVINQVRSALSSSADGFEG 353 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 + TLA++G+TT +G L ++ L AAL + V + G T + Sbjct: 354 PFSTLAELGVTTQA-NGTLSVNDSTLDAALTDNFESVAGVFAQVGSIADSTISFEGATAD 412 Query: 397 W 397 Sbjct: 413 T 413 Score = 61.9 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 383 KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQ 442 GI + L T G++ TDG+ ++++ D +A R++A +RY+ QF Sbjct: 590 SNGIGIALNGVLEGLTQTNGVLDLRTDGLQSGVDRIADDRDALDRRLEALESRYRRQFNA 649 Query: 443 LDVLMTSLNSTSSYLTQQFEN 463 LD L+ +++ST S++TQQ N Sbjct: 650 LDTLLANISSTGSFITQQLAN 670 >UniRef50_A4XNP4 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNP4_PSEMY Length = 431 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 43/455 (9%) Query: 15 LSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK--ADLFS 71 + S+ L + L + Q+++ A+LSA TL +AL TF++A + L + + Sbjct: 8 VQSMATQLAKYEIQGQLAKANRNQAAYKAQLSALTTLDTALKTFKSAASGLKLAGSSMLV 67 Query: 72 ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQ 131 +++ S SAT A+AG Y V LA L + +D LTI Sbjct: 68 NSASFSQEGYASATVGSKAVAGSYDFFVQQLASKSQLALQGLQDGD-----LGSGTLTIG 122 Query: 132 QGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDN 189 QGGD I + A S+L + AIN A GV A+++ NG+ L +TS TG D Sbjct: 123 QGGDSFEIDL---GAVSTLDELAAAINGAGDNTGVKATLVR-SNGQVNLVLTSEKTGADQ 178 Query: 190 AMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTISDALE 246 A++LS G+ A Q + G + A++A + + + + ++SNT + ++ Sbjct: 179 AISLSAGGNAAFQGAVA--------GRQELSVARDAIVRLGGETGIELSSTSNTFDNIID 230 Query: 247 NITLNL---NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 ++L + T+ I QD + + +V+A+N+L+ +F SLT + Sbjct: 231 GVSLTFSKAHKAGDTPLTIEIGQDQKATKEKAQTFVSAFNALMTSFDSLTA-------SG 283 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 +S G L GD+++R I+T L ++ + + +L + GI + +GKL +D + Sbjct: 284 GESGGRGPLAGDASVRAIETMLNQLVRTSFGGA---SLTEFGIVAN-RNGKLTIDNARFE 339 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDY 422 A+ + G L G + T+ NL + S+ G++ D ++ L ++ + + Sbjct: 340 KAVAANPEGFEKLFTDKG---NLLDTLDKNLAVYTSSAGGLLTNRKDTLNTQLRRVDQQF 396 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + + D+ +RY Q+T L M ++ T Sbjct: 397 DNIQKQYDSYYSRYLRQYTGLMQTMAAMEQTYGMF 431 >UniRef50_C6C371 Flagellar hook-associated 2 domain protein n=2 Tax=Enterobacteriaceae RepID=C6C371_DICDC Length = 499 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 196/456 (42%), Positives = 293/456 (64%), Gaps = 14/456 (3%) Query: 24 AAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS 83 + LT I+ +Q+S+ AKL+AYGTL+SAL TF TA ALS + L++ T+ + T+F+ Sbjct: 44 EVEDQKLTAITTKQTSYEAKLTAYGTLQSALETFSTATEALSDSSLYTTKKTS-TNTSFT 102 Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQG-GDKDPITID 142 AT A G Y++ VT LA AQTL + T T +S S T+ G + + Sbjct: 103 ATAESTASTGSYSVQVTQLATAQTLASATQSSKTTELGDSSLSSRTVTITVGSNTAVNVT 162 Query: 143 ISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 ++ + ++LSGI AIN+AKAGV+ASII G+ Y+L++TS+DTG + T+S Sbjct: 163 LTNSQTTLSGIASAINSAKAGVTASIIQSGDSSYQLTLTSDDTGEASTFTVSSDDTTLNG 222 Query: 203 SFM-GYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA-LENITLNLNDVTTGNQ 260 D++++SNGM VAAQNA+LTVN ++IE SSNT++D E +TL L+ V++ + Sbjct: 223 IIGYDGDSTSTSNGMTEQVAAQNAKLTVNGISIERSSNTVTDVPAEGVTLELSSVSSSAE 282 Query: 261 TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT 320 TLT+++ + A +A+ DWV+AYN+L+ +F++L+KYT+VDAG SQSS NGAL+GDS L + Sbjct: 283 TLTVSKSITDAVSAVSDWVDAYNTLLSSFATLSKYTSVDAGE-SQSSDNGALVGDSVLSS 341 Query: 321 IQTQLKSMLSNTVSSSSYKTLAQIGITTDPSD---------GKLELDADKLTAALKKDAS 371 I+TQLKS+LS+ SS +YK + Q+GI+ + S G L LD + L AL +DAS Sbjct: 342 IKTQLKSLLSHAQSSDTYKVITQLGISIESSSKDDNDNTIYGTLSLDDETLINALTEDAS 401 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDA 431 V VG+GK TG+ T + S ++++ G+I A +GV ++KL +Y A +I+ Sbjct: 402 AVSDFFVGNGKTTGLATQMVSAISTYTDDDGVIDGAEEGVQSIIDKLADNYTATQSQIET 461 Query: 432 QVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 ++ARYK+QF LDVL++ LNSTS LT F+ ++S Sbjct: 462 RMARYKKQFVALDVLVSELNSTSDTLTSMFDQLTSS 497 >UniRef50_Q1NS91 Flagellar hook-associated protein 2-like:Flagellar hook-associated 2-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NS91_9DELT Length = 572 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 117/573 (20%), Positives = 209/573 (36%), Gaps = 120/573 (20%) Query: 2 ASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 S+S+LG+GSGL+L I+D L ++ + P+ N + +L A+ +++ L + Sbjct: 4 GSMSALGLGSGLELQGIVDDLRKVDEQQRIDPLKNNITRLEDRLEAFNGVQNKLLEMRAH 63 Query: 61 NTALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + +SS F+ T A + V LA + + Sbjct: 64 ARELSLESTYLRRDVSSSNENVFTVTAGDGAAIQSNAVEVEQLATRSSWQSDGGFASRDA 123 Query: 120 AIA---------------------TSDSKLTIQQGGD-KDPITIDISAANS-SLSGIRDA 156 + + L I+ G D ++P + I+ SL + + Sbjct: 124 DLGYIPATQQSVTGVEDRYGDTALEAGKSLVIELGDDPENPTKLTINPTQDLSLQELGET 183 Query: 157 INN--AKAGVSASIINVG-----------NGEYRLSVTSNDT----------------GL 187 I + GV+ASII+ + RL++T ++T G Sbjct: 184 IAHHLGDFGVTASIIDASGNGEGPFHLKLDANVRLAITKDETEIGFASPGFKYEIGSGGA 243 Query: 188 DNAM---------------------------TLSVSGDDALQSFMGYDASASSNG----- 215 N + ++ +GD M A+ + Sbjct: 244 LNTIDVPLEEGLTLEQLVERINSEDNPGVTASIVDTGDPVAPYRMVMRANDTGENNRIRI 303 Query: 216 ----------MEVSVAAQN--------AQLTVNNVAIENSSNTISDALENITLNLNDVTT 257 M A + A+L V+ + + NTISD ITLNL Sbjct: 304 LNNPDLQGLTMNEQQGADDDGNKVSLNAKLRVDGITYQRQDNTISDIFPGITLNLQG--E 361 Query: 258 GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDST 317 G TL ++ T + + + V YN LI +Y D +S GAL ++ Sbjct: 362 GTSTLNVSGRTEDVREMVVEMVELYNELIQEVGDKVRY-------DEESGQPGALAR-TS 413 Query: 318 LRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVG 374 + ++ QL+ ++++ +++ +G+ DG + LD L L +D+ V Sbjct: 414 AQGLRHQLEGIMTSRFEGDESGQVRSMFDLGMEFQ-RDGSITLDTQVLDRQLAEDSDAVR 472 Query: 375 ALIVGDG--KKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQ 432 A + GD ++ G + L S S G++++ + + L + + + R+D + Sbjct: 473 AFLQGDAQREQQGFADNLQDRLGSIASMGGVMESEKNNAQDRIRDLERRIESETMRLDRR 532 Query: 433 VARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 A QF QLD M + S YL QFE+ Sbjct: 533 YAAMTRQFIQLDSYMQRMQSMGDYLEGQFESLK 565 >UniRef50_A6SXZ1 Flagellar hook-associated protein 2 n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXZ1_JANMA Length = 672 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 149/438 (34%), Positives = 239/438 (54%), Gaps = 35/438 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 ++S++GVGSGL L +L L A+ LT ++ +++S+ AKLSAYGTL AL+ FQ+A Sbjct: 2 AVSTIGVGSGLPLDDLLTKLMTAESQPLTLMAKKEASYQAKLSAYGTLNGALSAFQSAMA 61 Query: 63 ALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L K+ F + +T + T S T + A G Y I+VT LAQA +L+T T Sbjct: 62 TLGKSSTFDNLQTTVADKTILSGTASTKAATGNYQINVTQLAQAHSLSTAGQTSKTALIG 121 Query: 122 ATSDSKLTIQQGG--------------------DKDPITIDISAANSSLSGIRDAINNAK 161 + + + LT Q G + T+ I ++SL GIRDA+N A Sbjct: 122 SGATTTLTFQFGSITGGTLTDGKYTGATFTQDAKQATGTVTIKNGDNSLQGIRDAVNAAN 181 Query: 162 AGVSASIINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 GV+A++++ G + L TSN TG ++M + V GD ALQS +GYD A + ++ + Sbjct: 182 IGVTATLVSNGSDAPDHLVFTSNKTGAASSMKIDVDGDPALQSLLGYDP-AGTQSLKQNS 240 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 A QN QLTVN +++ +N + +A++ +TLN++ V GN T+TI +DT+ +T++KD++ Sbjct: 241 AGQNTQLTVNGFFVDSQTNEVKEAVQGVTLNVSKV--GNTTMTIAKDTAAVETSVKDFIK 298 Query: 281 AYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSY 338 AYN L T LT Y D+++++ G L+GDST+RTIQ Q+ LS ++ ++ Sbjct: 299 AYNDLNATIKKLTAY-------DAKTNTGGLLVGDSTVRTIQEQISKTLSASLEGLSNTN 351 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 +L QIGIT DG L +D+ KL+ A++ + + + L GK T + ++ Sbjct: 352 MSLPQIGITVQ-RDGTLAVDSAKLSKAMETNYNDIAGLFATVGKATDSLINFSGSTSATK 410 Query: 399 STTGIIKAATDGVSKTLN 416 + + I + Sbjct: 411 AGSYDITVTKLATRAEMK 428 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 14/282 (4%) Query: 186 GLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDAL 245 G ++ SG + YD + + + + +N + + NT Sbjct: 393 GKATDSLINFSGSTSATKAGSYDITVTKLATRAEMKGD---VNLNAGSTTIAPNT----- 444 Query: 246 ENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQ 305 + + ++ V+ T + ++ +N ++ S +T + + Q Sbjct: 445 -KMNITVDGVSAKISLTEGTYTAKELAAMVQSAINGAPEMVKVASKVTATIDSNGFLNLQ 503 Query: 306 SSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDADKLTA 364 S G+ S T + ++L S + IG G++ L A K + Sbjct: 504 SDRYGSASKISINSETGTPVSTLLGTVSSGTNGVDVEGTIGGMQATGSGQI-LSAAKGSD 562 Query: 365 ALKKDASGVGALIVGDGKKTG---ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKD 421 A +G + GK + S++ + G+I T+ ++ + ++T D Sbjct: 563 AAGLKIEVIGGALGSRGKIDFSQGYADRLNKLTDSFIGSEGLIAGNTNSLNSDIKRVTDD 622 Query: 422 YNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 +A R+ A ARY++QF+ LD L+ S+ +T +YLTQQ Sbjct: 623 ADAFKIRLTAIEARYRKQFSALDALVASMQTTQNYLTQQLAA 664 >UniRef50_Q1N2Y1 Flagellar capping protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y1_9GAMM Length = 1315 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 118/441 (26%), Positives = 212/441 (48%), Gaps = 37/441 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MASI SLG+GS L S +++++ A KA + +Q A++SAYG ++S L F Sbjct: 1 MASIESLGIGSDLLTSDLVENIINADKAAGELRLDTKQQIIDAEISAYGEIQSKLFDFSE 60 Query: 60 ANTALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + AL+ AD AT +T+S + +AT + +A G Y++ V +A+A +L +++ T Sbjct: 61 SIVALADADNVGATTATSSDDSILTATASSSAPEGNYSVEVQRIAKAHSLVSQSFSSTTA 120 Query: 119 TAIATS-------------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T + + I+I A N++LSG+RDAINNA GV Sbjct: 121 TVGTGTLEFKFGTTSYTGGGGYDDFDLNTEAASKEIEIDAGNNTLSGLRDAINNADFGVK 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-------SASSNGMEV 218 ASII G+G Y L ++S +TG + +M + + G A M Sbjct: 181 ASIIFDGSG-YVLQMSSEETGENMSMEIVAKDASGALATTGLSAFAYNKNQDTPGTNMTQ 239 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKD 277 + Q+A + +N + + SSNT+ + ++ +TLNL G T++++ D I+ Sbjct: 240 TQQGQDALINLNGLTVTRSSNTVDELIDGVTLNLKGEDVGKQVTVSVSPDIEGISEKIQK 299 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---S 334 V+ YN+ + + LT + ++ LLGDSTLR+I TQ++S++++TV + Sbjct: 300 MVDTYNAYKEVYDDLTSF-------NADRQQGSLLLGDSTLRSIDTQIRSLMTSTVEGIT 352 Query: 335 SSSYKTLAQIGITTDPSDG-KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 +++++ +++GI TD +D K++ DA +++++ V + + Sbjct: 353 GTNFRSFSELGIYTDQNDSYKMKFDASLFLKGIRENSEAVTGVFAQTASADDPFIQFMN- 411 Query: 394 LTSWLSTTGIIKAATDGVSKT 414 S + G ++ Sbjct: 412 -ESIKTKPGTYDINITQLATQ 431 Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 105/295 (35%), Gaps = 30/295 (10%) Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 ++ TGLD T++ F+ + VA Q+ L V I+ +++T Sbjct: 1040 STIKTGLDVQGTINGVEASGSGQFLRAQDGNQAATNGYYVAGQSDILN-GPVTIDGTNDT 1098 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + ++ + +N T + A++ +A N + K D Sbjct: 1099 FTIEVDGVEAVINVAQGTYAT------GASLAKAVQ---DAINETYEDDDISVKVDYTDD 1149 Query: 301 GADSQSSSNGALLGDSTLRT--IQTQLKSMLSNTVS-----SSSYKTLAQIGITTDPSDG 353 + + G + + + + + + S A++G D S Sbjct: 1150 TNSAAFGTIGIISASTGASSEVLINDINAAASTVFGFVQGRGDGEAGKAKVGDVDDASGL 1209 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVS 412 ++++ L TGI + L +L G++ D + Sbjct: 1210 RIKVTGGALGER------------GSVSYVTGIADRLKDILQGFLDPEGGLLDTKFDTLD 1257 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 K +L +D + RI AQ AR K QF D ++ +L +T +YL QQFE + + Sbjct: 1258 KQQEQLDEDRESFEARISAQEARLKSQFLYNDSIIATLKTTENYLKQQFEAMAAA 1312 >UniRef50_B9Z883 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z883_9NEIS Length = 463 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 133/470 (28%), Positives = 239/470 (50%), Gaps = 40/470 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MASI++ LD+ SI+ L ++ +T ++ S F +LSA G + S L++ QTA Sbjct: 1 MASITTS--VGALDVQSIVSQLMTIEQQPMTASQSRVSKFNTQLSAVGKISSGLSSLQTA 58 Query: 61 NTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT-- 117 +L+ + +++S +T S T+ +AG Y +++T LAQ + L D T Sbjct: 59 IRSLASGSFLQSYKASSSDSTIASVATSAATVAGSYALNITSLAQPRQLVFDKYADGTAI 118 Query: 118 ---KTAIATSDSKLTIQQGGD-KDPITIDISAANS-SLSGIRDAINNAKAGVSASIINVG 172 IA++ LT GG PI++ + +S +L+ +RD IN A GV+A+I+N Sbjct: 119 TDPTAVIASAPDSLTFTVGGKATTPISLRDNPGDSVTLNSMRDRINQAGVGVTANIVNN- 177 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGD------DALQSFMGYDASASSNGMEVSVAAQNAQ 226 NG Y+L +TS ++G DNA +S G ++ +++ + S AAQNA Sbjct: 178 NGNYKLVITSTNSGSDNAFLISAGGAEPADASSPASLGGLTQSTGTASAISESHAAQNAA 237 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LT+N V++ +SN ++DA+ +TL+L+ TG ++ + QD+ TA++ +V+AYN + Sbjct: 238 LTINGVSVSTASNHLTDAIAGLTLDLSK--TGEASINVVQDSDGITTALQAFVDAYNQVH 295 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLA 342 ++S+ ++ G++++ I++Q+ S+L+ VS +SY LA Sbjct: 296 SA---------------AESARTDSMKGNASVLAIESQMTSILATPVSGANPYNSYAYLA 340 Query: 343 QIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 Q+GI+ DG L+LD AL D + V L G+ G + + L G Sbjct: 341 QVGISIQ-KDGTLKLDKTAFNTALSADPAAVKNLF-GNSNNDGFADRFNAVINQLLGPDG 398 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 II+++ ++ ++ T ++D +Y +Q+T L+ ++ + S Sbjct: 399 IIESSKSSINSRIDFETNYQTGLQSKLDRLKTQYTQQYTNLNAILAKMQS 448 >UniRef50_C9YEJ5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEJ5_9BURK Length = 472 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 145/478 (30%), Positives = 245/478 (51%), Gaps = 22/478 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +ISS G+GSGLD++SI+ L+A +K L + + ++ +LS G ++S ++T +A + Sbjct: 2 AISSTGLGSGLDVTSIISQLSALEKQPLKSLQTKATTLQTQLSTVGVIQSQVSTLASAAS 61 Query: 63 ALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + T+ TSS T A SAT A A Y+I V+ LA+AQ+L TT T Sbjct: 62 KLGSVLSWKGTTATSSNTSAVSATAGTGAAAASYSIEVSKLAKAQSLALPTTVGSTALPA 121 Query: 122 AT---SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYR 177 AT L+IQ G + ++I+I+ +L+ I IN + GV+AS+I+ G+G+ Sbjct: 122 ATDQLGYGTLSIQVGSN-AAVSINIADGEGTLAQIAAKINGVSGLGVAASVISDGSGKVN 180 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQ-----SFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 L + + +TG D A T++ + + + + M + A QNA+ T+N V Sbjct: 181 LMLRATNTGSDGAFTVTATEGTGGSVSVPSNLSRLSYTTGNFAMAQNQAPQNAEATINGV 240 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 A+ +S NT+++ ++ + L L+ VTT +T+ +DT+ I+D++ AYN+L T + Sbjct: 241 AVSSSKNTLTNVVDGLNLTLSQVTTTAVDVTVAKDTAGMTKTIQDFIGAYNALNQTLNDA 300 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-SNTVSSSSYKTLAQIGITTDPS 351 T Y D+ + + GAL GDS +Q L+S++ + + + S++ LA IGI+ Sbjct: 301 TAY-------DAATKTAGALQGDSVATGLQRALRSLVGATSSTGSTFSRLADIGISA-KL 352 Query: 352 DGKLELDADKLTAALK--KDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 G LEL++ KLT+A + + G G I L+ TG + T+ Sbjct: 353 GGDLELNSTKLTSAFSDVSNLQLLFTNFGGSDASNGFGLRIKDFANGLLAATGTVTNKTN 412 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 V K ++ + + + R R K Q+ LD M SL + +SY++QQ + S Sbjct: 413 AVKKAIDLNSTEQTKVNTRASNLETRLKAQYAALDTKMASLTALNSYVSQQVTTWNKS 470 >UniRef50_C4L5M8 Flagellar hook-associated 2 domain protein n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L5M8_EXISA Length = 549 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 108/548 (19%), Positives = 201/548 (36%), Gaps = 93/548 (16%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 I G+ SG+D SI+ + A++ + + ++ + +Y + +L + + Sbjct: 5 IRFGGLASGIDTDSIIKQMMQAERVPVDRLEQKKQLTEWRRDSYREVNRSLLALRNSAVD 64 Query: 64 LS-KADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT--- 119 + + ++ T+++S + S ++ TI+ LA + + Sbjct: 65 MMFSRNYYAKTASSSDESRVSVVAGPSSGNASLTINSATLATSASHVAVANGGGITNDTA 124 Query: 120 -------------AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDA---------- 156 I ++LT++ + P D +L+ DA Sbjct: 125 VSTLGLEVGIRKQTITAGTTELTVKPLPNNPPTFTDKDGNAITLAHTYDAATGKITFDSG 184 Query: 157 ------------------INNAKAGVSASIINVGNGEYRLSVTS------------NDTG 186 N G ++ N +++ VT+ ++T Sbjct: 185 VTIPEGAQVVYEAGYQVRFRNEDGGALQTVYVDENAKFKDLVTALNGTKTGISAFFDETS 244 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALE 246 ++T +G+ ++ F G A A G+ VA NA + VN + + SSNT + ++ Sbjct: 245 GKISLTRKNTGEQSIIEFEGTAAKAL-FGLNGFVAGTNASVDVNGITLTQSSNTFT--ID 301 Query: 247 NITLNLNDV--TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK---------- 294 N+T+ L L+ DT K IK +V+ YN ID + T+ Sbjct: 302 NMTITLKSSFNDGTKVNLSAATDTQKIFDNIKGFVDKYNETIDLMNKKTREERFRSFAPL 361 Query: 295 -------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS---SYKTLAQI 344 + + + + +G L GD+ LR L+S S SS+ L QI Sbjct: 362 TQAQRDELSEDEIKKWEEKAMSGMLRGDTILRGTMDTLRSKWSGATSSTNDLDMSRLFQI 421 Query: 345 GITTDPS---DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 GI+T GK+EL+ +KL AA++KD V L +TG+ I T Sbjct: 422 GISTGSDFTNGGKIELNEEKLKAAIEKDPEQVYQLFT--DAETGLLPQIRDAAKDSRDTI 479 Query: 402 GIIKAA------TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 I A T + K + + +D + + Y +FT ++ M N+ ++ Sbjct: 480 TRIAGAEGSGAQTHSMGKEMTDIDSRIKRLNDLLIDKENAYYRRFTAMETAMNQANAQAA 539 Query: 456 YLTQQFEN 463 L+Q Sbjct: 540 SLSQFLGG 547 >UniRef50_Q7NRA7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRA7_CHRVO Length = 456 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 126/478 (26%), Positives = 221/478 (46%), Gaps = 36/478 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+S LD+ I+ L A ++ L + + +LS G L S+L+ QTA Sbjct: 1 MAAITSS--VGALDVQGIVSQLMAIERRPLNESQQRADQYNTQLSTVGKLSSSLSALQTA 58 Query: 61 NTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL----TTRTTRD 115 T LS +T S + + +T +G Y I V +LA ++ L +T Sbjct: 59 LTGLSSGRFLQVFKATVSDASMGAVSTTSGGSSGTYQIDVKNLATSRQLVFDQVGTSTIT 118 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAAN-SSLSGIRDAINNAKAGVSASIINVGNG 174 D K AI+ + ++ Q G +T+ + SL I D IN A G++AS++ G+ Sbjct: 119 DPKAAISGAPDSISFQVNGKTQTVTLRSKPDDVVSLQTINDKINAAGIGINASVVQNGS- 177 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA----SASSNGMEVSVAAQNAQLTVN 230 +Y+L + S ++GLDN + + + S S S A NA LTVN Sbjct: 178 QYKLVLGSVESGLDNQFKIVAGSNSSDSGGTSGSTLAGLSQSPTAGTESRDASNASLTVN 237 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 VAI SN ++ A+ + ++L G+ T++++ D++ ++ +V+AYN +I Sbjct: 238 GVAISAGSNKVTSAVAGVEIDLYKA--GSFTVSLSPDSAGVAKNLQSFVDAYNQVIG--- 292 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLAQIGI 346 D +++ +GAL G++++ IQ +L+ +L+ V+ +S L+Q GI Sbjct: 293 ------------DVKAARSGALKGNASILDIQGKLQQVLATPVAGVDPVNSIAYLSQAGI 340 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 + DG L+LD A+KKD V L G+ TG + L G+I+ Sbjct: 341 SLQ-KDGTLKLDQTAFNDAMKKDKQAVVNLF-GNASNTGFAQRFNLEINGMLDPKGVIET 398 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + + ++ T+ ++ R+D + A+ Q+T L+ + + S SS L + Sbjct: 399 SKATIRTKVSTETQLQSSLQSRLDTKQAQLIRQYTALNKTLAEMQSGSSSLFNLISSK 456 >UniRef50_A8U5Y9 Flagellar hook-associated protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U5Y9_9LACT Length = 496 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 52/503 (10%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ LG SG+D S+ +D++ A+ + +N+QSS TA+ +A+ + + L + T Sbjct: 3 GSINFLGSYSGID-SATIDAMIEAESGKVVQYTNKQSSITAEKNAWKDINTRLDSLFTKL 61 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + F + S TSS T + T +++A Y+I V LA + +T+ Sbjct: 62 GTLGEDKTFKSKSATSSDATKVAITAGTDSLASDYSIEVNRLATSNKVTSGEIPLAEGAT 121 Query: 121 IATS---DSKLTIQQGGDKDPITIDISA---------ANSSLSGIRDAINNAK--AGVSA 166 I S T+ P+ ++ A SL I IN +G+ A Sbjct: 122 IKGSLKLSGTFTLTSQATSGPVEEKEASIGKFDISIEAKDSLKDIVGKINEKTKESGIQA 181 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN--GMEVSVAAQN 224 I++ R+ +T + G D++ + D + + + Q+ Sbjct: 182 KIVDN-----RIIMTDSKMGERTMTFGGNLTDESGIAIDNSDMAKALGFEKDKAYEGGQS 236 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTG--NQTLTITQDTSKAQTAIKDWVNAY 282 A+LTV+ + + +SNTI+DA+E +T++L VT T+ I +DT A + +V+ Y Sbjct: 237 AELTVDGIKVTRNSNTITDAVEGLTIDLKGVTEASKPVTIGIKEDTDTTVKAFQSFVDQY 296 Query: 283 NSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKT 340 NS + ++ + GAL GDS+L +Q+ L+S+++ +VSS +YK Sbjct: 297 NSTLTFVGDQLDVGDPS----AEKNKTGALAGDSSLIRLQSSLRSLMTQSVSSGNPAYKN 352 Query: 341 LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG--------------- 385 L IGI+ D G LD KL AL D + V ++ Sbjct: 353 LEAIGISVD-RFGAATLDTAKLKTALADDPTAVKKMLFQTTTTETPGVDENGAPTTVKTE 411 Query: 386 ----ITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQF 440 + + + + +++S TGII + K +TK ++R+ + Y F Sbjct: 412 KEVGMAQKMRALVDTYISDKTGIIVTKSATYDKLSEDITKSIAKFNERLVKKRENYVAMF 471 Query: 441 TQLDVLMTSLNSTSSYLTQQFEN 463 T+LD M S +YL QF Sbjct: 472 TRLDTAMMQAESQMAYLQSQFST 494 >UniRef50_C4G7B8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7B8_ABIDE Length = 523 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 103/531 (19%), Positives = 201/531 (37%), Gaps = 79/531 (14%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA-N 61 + G+ SG+D S++ + AQ+ L I ++++ K + L + L + T+ Sbjct: 2 GVRLTGLNSGMDTESMIKKIMDAQRTKLNKIEGKRTTLDWKKEKWKDLNTKLYSLYTSKI 61 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++L + + + T+S +A+ G + I V A+ QTLT D Sbjct: 62 SSLRFSGAYTTKRVTSSDENVVKVKGDPSAVDGAHKIQVKQTAKTQTLTGAKVTDGIDKN 121 Query: 121 IATSDS------KLTIQQGG-DKDPITIDISA--------------ANSSLSGIRDAINN 159 +D ++T + G IT D A +++++ + DA Sbjct: 122 SVLTDIGFDLGEEITFKTGEWANKEITADNEAEAMASGKVHKFEINGDTTVNELLDA--A 179 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 KAG++AS + + R +S ++G NA ++S S +D + + + Sbjct: 180 KKAGINASF---DDKQKRFYFSSKESGTANAFSISESHNDVPMTSGLEKLGLAGSANFTK 236 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG--------NQTLTITQDTSKA 271 + AQ+A V+ +SSN S + + L L+ T + T+ + D Sbjct: 237 IDAQDAIFRVDGTEYTSSSNNTS--VNGLNLTLSGTTADYDLGDAGKSVTVNTSTDVEAV 294 Query: 272 QTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLG 314 K ++ YNS++ + L + D + + L Sbjct: 295 YNNFKSFIKEYNSILKEMNELYYAGSSRGYDPLTADQKKDMSEKDIENWEKKIKDSVLRR 354 Query: 315 DSTLRTIQTQLKSMLSNTVS--------SSSYKTLAQIGITT--------------DPSD 352 DS L T+ +KS + ++V+ + +LA G+ T D D Sbjct: 355 DSKLGTVLNAMKSAMQSSVTVGADSENKGGTKYSLASFGVMTSTDYKEKGLLHMFGDSED 414 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVS 412 G DKL AL ++ S + G + + + + ++ + ++ Sbjct: 415 GVYASKEDKLKKALTENPSETAEAL--QGIMNNLYSKMTDAMKGTSLSSAMTFYNDKEIT 472 Query: 413 KTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + N K+YN +++ +Y +QF ++ M LNS +S L+ N Sbjct: 473 QMSNTYKKEYNTLEAKLNKMEDKYYKQFAAMEKAMAKLNSQNSRLSSMLGN 523 >UniRef50_A1SEQ5 Flagellar hook-associated 2 domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SEQ5_NOCSJ Length = 443 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 117/469 (24%), Positives = 212/469 (45%), Gaps = 36/469 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+ S G+ SGLD +SI++ L + + +QQ+ + A L + + Sbjct: 1 MATSSISGLASGLDTASIINQLMQLEAVPQNKLRDQQTVENNVIRALRQLNTDAALLASN 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+K + + TS+++ +A+ +A +T+ V +A++ + Sbjct: 61 AAKLAKPEAWQTLKATSTSSTVTASATASASPSSFTVVVGQVAKSAQTSYSADVALDANV 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 + + + + D T I+A +L+ + IN AKAGV+A+ + G YRL + Sbjct: 121 LTVAGDPVVLTA---ADGTTHTINAGTGTLTDLAAGINAAKAGVTATTVRTGTNTYRLLL 177 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 T++ TG +A++LS + + Q+AQLT+ + + +NT Sbjct: 178 TADTTGAGSAISLSNVSLGTATTDL----------------GQDAQLTIGGIPASSKTNT 221 Query: 241 ISDALENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 +D + +++ L T+++ QD+S ++++K V+ NSL+ + Sbjct: 222 FTDLVPGVSVTLASTAKNGDTSTISVAQDSSSVKSSVKALVDQVNSLLTSID-------T 274 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 + +++ G L GDST R+ L+S L NTV +LAQ GI TD GKL D Sbjct: 275 QTATKTSTTAAGILAGDSTARS----LRSALLNTVFGDGTTSLAQYGIQTD-RYGKLVFD 329 Query: 359 ADKLTAALKKDASGVGALIVGDG--KKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTL 415 ADK A D +GV A G + S + + TG I +A G + T+ Sbjct: 330 ADKFATAYAADPAGVAAKFTSATPPATDGWAARVDSVAKAATDSYTGTITSAITGHTTTV 389 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 ++LTK DR++ + A + +T L+ +++L S ++L Q + Sbjct: 390 DRLTKSIADWDDRLEIRRASLQRTYTALETALSNLQSQGNWLAGQIASL 438 >UniRef50_C8WZ11 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZ11_DESRD Length = 467 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 107/480 (22%), Positives = 205/480 (42%), Gaps = 36/480 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + + G SGL ++++ L +A Q+ +TPI+ + ++S + +L+S + + + Sbjct: 7 SGVYLGGRPSGLP-DNLVEQLVSARQQQKITPINQDINEVDDRISLFQSLESKVASLEDT 65 Query: 61 NTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTL------TTRTT 113 L + F A ++S+ A S G +G YT+ V LAQA T T Sbjct: 66 LGDLQDSSDFEEAKVSSSNDQALSVAQNGAPQSGSYTVEVDTLAQADVQLVGLDDGTTTG 125 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 D + + D + T SL + D IN + AGV A N+G Sbjct: 126 VDTGIADTTDASLVEDVTFEFDHNGSTHSFDTTGKSLQALADEINASDAGVQAYTANIGT 185 Query: 174 G---EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 EY LS+ S+ G G D L S + + +S E S+A Q+A +V+ Sbjct: 186 QDDPEYALSLKSDTPG---------GGVDDLISNISGNLFGTSTTTENSMAGQDAAFSVD 236 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 V+ SSNTI D + +++ LN+ G ++ + +DT + + +V+A+N + Sbjct: 237 GVSYTRSSNTIEDVIPGVSMTLNENFAGQVSVGVEKDTEAIEKKVSAFVSAFNDVRSF-- 294 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIGIT 347 + + + G LLG S ++ + ++ ++ S ++Y L +IG+ Sbjct: 295 -----ISSKSSYSEDDDTAGGLLGSSLAGRLEMSMANLAIDSFAALSGNTYDRLPEIGVE 349 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST-TGIIKA 406 DG L LD+ K A++ + V +L DG + + S L + + G + Sbjct: 350 LQ-RDGTLALDSAKFQEAMETNGQDVASLFTEDGG---VADKMQSLLGGYTDSIDGSLTY 405 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + ++ +++L D A + I++ R +++T ++ + +T + + Sbjct: 406 KLESLNNQMSRLEDDKQDAYNSIESYRDRLVDKYTAMETQIRQYQQMQESITSLTLSFNK 465 >UniRef50_Q9R9R6 Flagellar hook-associated protein 2 n=4 Tax=Aeromonas RepID=FLID_AERPU Length = 464 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 129/480 (26%), Positives = 227/480 (47%), Gaps = 32/480 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+S G GSG+DL S++ + +A+KA L PI +Q+S LS G LKS+++ F Sbjct: 2 AITSAGAGSGIDLESVISASVSAKKAQLQQPIITKQNSTQITLSGIGQLKSSISAFTDIL 61 Query: 62 TALSKADLFSATST----TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 LS F+ + + A G+Y I V LA+ D + Sbjct: 62 DKLSAPGAFNKRAINITQSKDDPILKVEGKSGASNGQYNIIVNKLAETSRQ--EGIFDSS 119 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA--GVSASIINVGNGE 175 T +AT D +LT + G + + A +L IR +IN+ G+S +I+N +G+ Sbjct: 120 TTPLATQDGQLTFKAGDKTFKVDVK---AGDTLQDIRKSINSNGDNFGLSVNIVNTADGK 176 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L + S +G +T++ + A M + AA +A++ V+ ++ Sbjct: 177 AKLVIDSGISGDGKDLTITGDNAELGV------FEAGGGVMSQTRAASSAEINVDGNVLK 230 Query: 236 NSSNTISDALENITLNLNDVTTGNQ-------TLTITQDTSKAQTAIKDWVNAYNSLIDT 288 + +NT D+++++ + + V+ + + IT D + Q ++ +V+ YN+L D Sbjct: 231 SDTNTFDDSIQDLKVTVLRVSDKDSAGDLKANKVDITTDKTSIQELVQQFVDGYNTLQDK 290 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-VSSSSYKTLAQIGIT 347 +SL K G GAL GDST R I++ + ++L + +S +Y T+ +IGI Sbjct: 291 MNSLGKRNTFVGGVKQDD--GGALAGDSTTRAIESFMSNLLVSPSQNSGTYSTVFEIGIK 348 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 D GKL LD K A+ K+ V AL G + G+ +T+ S L + + G++ Sbjct: 349 MDNK-GKLSLDKTKFGEAVDKNFDQVVALFGG---EKGLASTLNSGLKEYTKSGGMLAQR 404 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 D ++ L LT+ A+ ++ A + Q+ LD L+ +NS++S L + S Sbjct: 405 EDVLNSDLRALTQKTATANAQLTKYEAALRAQYGSLDALLVKMNSSASALATLQTSYQKS 464 >UniRef50_B1I5H1 Flagellar hook-associated 2 domain protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5H1_DESAP Length = 606 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 164/397 (41%), Gaps = 51/397 (12%) Query: 102 LAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK 161 +A+ T+ + + + T Q G + T + A +L+G+ + I+ Sbjct: 221 VAEGDTVVAGYEYNTRTFDFSLT----TYNQNGTPNNRTFTVDAVTETLNGVLNRISADS 276 Query: 162 A-GVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 A G+ A + R+SV++ TG +NA +GD+ G+ A G V Sbjct: 277 ALGLVAFYEGSSD---RVSVSTTRTGDNNA-----AGDEIGVGTTGFLAEVLRLGTAVEQ 328 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVN 280 NA++T+N + I +N S L N+ +L TG TLT+ DT+ I+ +++ Sbjct: 329 GGTNARITLNGLDITRPTNEFS--LNNVHFSLKA--TGTATLTVRSDTAFVFQHIRGFID 384 Query: 281 AYNSLIDTFSSLTK-------------------YTAVDAGADSQSSSNGALLGDSTLRTI 321 AYN ++D + + T Q + +G L DS L +I Sbjct: 385 AYNGILDLLNGKLQEERFRDYLPLLDDDPARERMTEKQIDQWEQKARSGLLRHDSLLSSI 444 Query: 322 QTQLKSMLSNTVSS--SSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALI 377 +L++ + VS +S L IGIT GKL +D KL A+++D GV L Sbjct: 445 VNRLRTDVFTPVSGLGASLNHLVHIGITVGSFADQGKLVIDEAKLRRAIEQDPEGVARLF 504 Query: 378 VGDGKKTGITTT-------IGSNLTSWLSTTGIIKAATDG----VSKTLNKLTKDYNAAS 426 G + + + + G A+ + + ++ L + Sbjct: 505 NQSGTTNEEQGIGHRLYGYLDTAIKQLTARAGSPTYASSYDPSWLGRQISMLDERMQRTE 564 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 +R++ RY +QFT L+ ++ +N+ S +L QQF Sbjct: 565 ERLEKLEDRYWKQFTALERAISRMNAQSMWLAQQFGG 601 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 13/268 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT- 59 M+ I G+ +GLD ++ L + + + ++ + Y + SAL F+ Sbjct: 1 MSVIRIGGLATGLDTYQMIQDLMKVHRKPVDRLRQERQVLEWRREDYRGINSALLNFRNG 60 Query: 60 ANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 ++ + F + T +S+ A +AT + A Y ++VT LA + T + Sbjct: 61 TVFSMRLSSTFLAKTVASSNPAAVTATASPGAAKADYAVTVTSLATTAYKASTGTVSASG 120 Query: 119 TAIATSDSKLT---IQQGGDKDPITI------DISAANSSLSGIRDA-INNAKAGVSASI 168 D+ L + G ++ + +I+ ++ + A I A V Sbjct: 121 ADKVDPDATLWSQRAKFGSNQFGWNLASVAGENIAGTGTNFYQLAHAWITPGSAAVKVVY 180 Query: 169 INVGNGEYRLSVTSNDTGLDNAM-TLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQL 227 G Y++ T + V + F A + + Sbjct: 181 GTGGEQVYQVYYTREAYNAGVEAHKVLVDTNTGALEFNQVVAEGDTVVAGYEYNTRTFDF 240 Query: 228 TVNNVAIENSSNTISDALENITLNLNDV 255 ++ + N + ++ +T LN V Sbjct: 241 SLTTYNQNGTPNNRTFTVDAVTETLNGV 268 >UniRef50_Q8D3D8 FliD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D3D8_WIGBR Length = 505 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 110/509 (21%), Positives = 202/509 (39%), Gaps = 47/509 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M IS LG+ S + ++ + + + I ++ + K+S++G + L Sbjct: 1 MNEISMLGISSQGATAELIKKIEEIETHKINNIKLKEDKISYKISSWGKINFLLQNLSDK 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + +S F A N G + I V LA+ L+ + + Sbjct: 61 LNNLGEKSFSFLK--SSDNECFKAV--SNDFYGSHKIKVIQLAKKHVLSLSVPKSMNEIL 116 Query: 121 IATSDS-KLTIQQG-----GDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVG-N 173 + I G G K+ I I + SSL GI AIN + A + A I +G Sbjct: 117 GNKEPIRYINIIHGKEIKPGLKNNTVIKIKRSESSLRGIEKAINQSGAKIKAEIKKIGLK 176 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY-----------------DASASSNGM 216 + RL +TSN G + + + V GD+ L + + + + + + Sbjct: 177 NKNRLILTSNILGEEGKINIHVEGDEKLNRMLCFPYNENVNEKSKLEYKKENKNFNEPKL 236 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-------TLTITQDTS 269 E + N+ + V+N +N I D L+N+TLNL + + TL+ + Sbjct: 237 EEIQRSDNSIIKVDNNLYYRKTNIIRDVLKNVTLNLKKTSKESSKNLEDGETLSFYFNKE 296 Query: 270 KAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSN-------GALLGDSTLRTIQ 322 K KD+V ++N I+ + L ++ + N G +GD L I Sbjct: 297 KFLKFFKDFVKSFNLFINESNKLREFEINEKSISPYQKRNDKLLYNIGPFIGDYLLNNIT 356 Query: 323 TQLKSMLSNTVSSSSYKT---LAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVG 379 +LK ++ K + +GI +P +G L LD DKL ++ + + + Sbjct: 357 NKLKFLIRKNFDDYKNKNIIFIEDVGIKINPKNGNLILDNDKLIKNMQNNWKNLRNFFLK 416 Query: 380 DGKKTGITTTIGSNL--TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 + I++ I N+ +++ I + + ++K + K+ + ++ YK Sbjct: 417 SNFISDISSFIEDNIYKKGTINSNKSIISEINNLNKQKKIINKEIEKSEMLSYNKINMYK 476 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 EQF +LD+ M+ + L+ F NN N Sbjct: 477 EQFKKLDLFMSKTDYIRKQLSALFSNNKN 505 >UniRef50_Q2SCW2 Flagellar capping protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCW2_HAHCH Length = 656 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 127/401 (31%), Positives = 225/401 (56%), Gaps = 20/401 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS+SS+G+GSG+ S +++ L +A++ + ++ TAKLS LKSA+T + Sbjct: 1 MASVSSIGIGSGVLTSDLIEQLASAEREPTEKRLDLKEDEVTAKLSDLSRLKSAITDLRL 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + LS + S+ + TSS ++ T +A G Y ++V++LA AQ+L++ T D T Sbjct: 61 SARTLSTPESMSSNTATSSGSSIGVTANTSAKTGSYALTVSNLAVAQSLSSGTFADKDTT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 + L+ GG + +T+D ++N++L G+ DAIN+ V++S+I G+ Y+L Sbjct: 121 TV--GTGTLSFTVGGVTENLTVD--SSNNTLQGLSDAINDMGLDVNSSVIYNGS-SYQLV 175 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMG----YDASASSNGMEVSVAAQNAQLTVNNVAIE 235 ++++ TGL NA+++S + +D + + +A++ + VAA++A T+N VAI Sbjct: 176 LSASKTGLANAISISATDNDGNSTDASGISQFIYNATNQNLTQDVAAEDAAFTLNGVAIT 235 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 S NT+ D ++ +TL LN T +T+++D + ++D V+ YN+L + + +T + Sbjct: 236 RSLNTVDDVVDGLTLTLNAETASAVNVTVSKDLNAVTERVQDLVDKYNALQEIINEVTAF 295 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPSD 352 DS + G LLG ST+RTI TQL+S LS+ V S+ ++L+++GITT+ Sbjct: 296 -------DSDTGEKGTLLGSSTVRTISTQLRSTLSSIVPGLESSNVRSLSELGITTNSES 348 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSN 393 G+LE ++ + L+ + V AL G+ T S Sbjct: 349 GQLEFNSLTFQSKLQSYPNDVAALFADQGRTTDAQVKYVSA 389 Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 45/84 (53%) Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 G+ + + S+LS+ G+I A +G + L K+++D DRI A R QFT Sbjct: 567 EGVGDQMVDLVNSYLSSEGLITVAINGFNSQLEKISEDRTELDDRITALTDRLARQFTAA 626 Query: 444 DVLMTSLNSTSSYLTQQFENNSNS 467 D++++ L +T ++L+ Q E S Sbjct: 627 DLIISQLKNTENFLSTQLEALLAS 650 >UniRef50_Q1NGK2 Flagellar hook-associated protein 2 n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGK2_9SPHN Length = 471 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 138/473 (29%), Positives = 240/473 (50%), Gaps = 21/473 (4%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++LG GSG+D SS++ SL +A + I+++QS ++++SA + S+L TF A T Sbjct: 9 LTALGAGSGIDTSSLVSSLVSATRDPKESAITSRQSLNSSRISALASAVSSLDTFADALT 68 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGK--YTISVTHLAQAQTLTTRTTRDDTKTA 120 + ++ T+ ++ ++ S T + V LA A+ L++ T T ++ Sbjct: 69 EVLSGAAYTGTAASNDSSIASVTLLSGGSPAGLPAQLIVDQLATARVLSSTATAGATGSS 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 A TI + TI I ++N+S +G+ AIN A GV+A ++ NG RL Sbjct: 129 -AVGTGSFTIT-NAAGEATTITIDSSNNSFAGLASAINAAGTGVTARVVTDTNGT-RLVF 185 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGY-DASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +TG N ++S S DD+ G + A S M + A QNA++T++ VA E +SN Sbjct: 186 KG-ETGAANDFSVSTSADDSGSVLAGLGWSGADSATMSSTSAPQNAKITLDGVAYEYASN 244 Query: 240 TISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 T+ A++ + ++LN + G TL++TQ T+ +K++V+AYN+L+ ++ T Sbjct: 245 TVDGAIDYLRIDLNKASPGTTVTLSMTQPTAGLSDLLKEFVSAYNTLMTALNTATA---- 300 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLEL 357 + SSS G L G S +R ++ QL ++ S + S +YKTLA IG+ T+ DG L L Sbjct: 301 ---TGADSSSAGVLNGVSGVRDMKRQLAAITSTPLGSTGTYKTLADIGVATN-RDGTLSL 356 Query: 358 DADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 D D L A++ D GV ++ G+ + + S S G +K A + Sbjct: 357 DTDMLAKAMEADPEGVTNMVNPKVSTAANPGLASLMDSVRDSIEKDDGPLKLAQERYGAL 416 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 T+ + D++ + + ++ +++L +T SYL QQ + +NS Sbjct: 417 AEDFTEQLSKLDDQMTNYQEHLTKVYAAMETRLSALKATQSYLEQQIKVWNNS 469 >UniRef50_Q893U0 Flagellar cap protein fliD n=1 Tax=Clostridium tetani RepID=Q893U0_CLOTE Length = 556 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 92/551 (16%), Positives = 180/551 (32%), Gaps = 110/551 (19%) Query: 10 GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 SG+D I+ + A Q+A + ++ K Y + + Q ++K D Sbjct: 17 ASGIDTDDIIKKMLAGQQAKVDKAKQEKQQVEWKQEIYRDIIKDIKELQNTYFDITKKDS 76 Query: 70 FSATST-------TSSTTAFSATTAGNAIAGKYTISVTHLAQAQ----TLTTRTTRDDTK 118 ++ +S+ +A+ AI G Y + V LA+ L T T + Sbjct: 77 LNSGKAFYDFASKSSNEGIITASAGQGAIEGIYKVKVNKLAKGAQAYKQLGTDVTNSNKL 136 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKA-----GVSASI-INVG 172 + TI G + +D +S++ + +I NA +S + ++ Sbjct: 137 KDLGIETKDFTITVDGKDFKVKLD-KGEDSTVGDLVSSIKNATTADGKEKLSKYVNVSFS 195 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 R+ + + +TG + M+++ S G D SA E+ V + Sbjct: 196 EISKRMVIETKETGKEQIMSITG------GSIFGTDFSAKGEDAEIQVITPDG----GTG 245 Query: 233 AIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 + N+ N L+ I+ NL ++ L IT+D K KD++ YN++++ + Sbjct: 246 TVNNAKNNF--ILDGISFNLKSISEKQEVNLEITKDVDKTVDRFKDFMKKYNNVVEKING 303 Query: 292 LT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS 334 + + + + G L D L + +L+S V Sbjct: 304 KLTEKKAYKYKPLTEAQRKEMKEDEIKKWEEKAKEGILRNDPNLEKMLRELRSTFFAEVE 363 Query: 335 SSSYKTLAQIGITTD---PSDGKLEL---DADKLTAALKKDASGVGALIVGDGKKTG--- 385 SS IG+ T + G++ +K AL + + L K Sbjct: 364 GSSESFGRHIGLDTTKYAKTAGQIRFVEGGEEKFKKALLERPEDIMELFTKKADKNDLDN 423 Query: 386 ---------------------------------ITTTIGSNLTSWLSTTGIIKA------ 406 I T I + L ++ G Sbjct: 424 LRKLQNLSKSKKITADQRKELIEVEKRVYNNSGIMTRIDNILKDYVGLPGNTLNSSILTK 483 Query: 407 --------------ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 +++ + + + ++ + R +QF ++ MT N+ Sbjct: 484 YANKQEDHSVTGVVSSNNLPDQIYRKDNLIKELDKKLREKEERLYKQFAMMEKAMTKYNA 543 Query: 453 TSSYLTQQFEN 463 + +L QQF Sbjct: 544 QAGWLAQQFGG 554 >UniRef50_A6GTZ6 Flagellar hook-associated 2-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTZ6_9BURK Length = 549 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 119/414 (28%), Positives = 190/414 (45%), Gaps = 35/414 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M ISS G+GSGLD+ I+ SL AA++ LT +S ++++ K+S YG +K++ + A Sbjct: 1 MVGISSAGIGSGLDIEGIISSLMAAERIPLTKVSQERTAINTKISIYGIIKNSFADLKAA 60 Query: 61 NTALSKADLFS-ATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 LS + + +T+S SA+ + G Y+I V+ LA+AQ++ + T Sbjct: 61 ADKLSSLNNLNPLKATSSDEKIVSASASAAGAKGSYSIEVSQLAKAQSVAAQGVATADTT 120 Query: 120 AIATS---------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN 170 S T DK P+TI+I +L GI+ AIN++ AGV+ASI+N Sbjct: 121 VGTGSLTITLGSYDSGTNTFTNNADKTPVTINIGTGQQTLDGIKQAINDSDAGVTASIVN 180 Query: 171 VGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMG---------YDASASSNGMEVSVA 221 G G RL +TS +TG N L V+ D + A + + Sbjct: 181 DGAGS-RLVLTSKETGAVNGFKLEVTDADGNNTDTTGLSRLAYDPTAAVGAGKNADTLQV 239 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 AQNA T+NN+ + +SNT++DA+ +TLNL TT L + D + +T + +V A Sbjct: 240 AQNANFTINNLPVSKASNTVTDAVAGLTLNLKAQTTSPVNLEVGLDDTALKTTLDGFVTA 299 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN + Q + L ++T T++ L+++L V+ L Sbjct: 300 YNKIRGNLKD-------------QQQKDATLSRETTPSTLERGLRNILREQVAQYGIG-L 345 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLT 395 + IG++ D DG L L+ KL A+ D S + + T Sbjct: 346 SDIGLSFD-KDGVLSLNKTKLDTAVAADPSILEKVFANTATTTDARVKYLGANN 398 Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 44/92 (47%) Query: 377 IVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 + G+ + + S G + + TDG++ ++L + + R++ RY Sbjct: 458 MGTITFSKGLAERLSDWIGSLTDEGGTLVSRTDGLTSRKSRLDDQEDRLNLRLEQVEKRY 517 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 + QF+ LD ++ S+ TSSYL+QQ + + Sbjct: 518 RAQFSALDSMLASMQQTSSYLSQQLAALAQQR 549 >UniRef50_C5BRZ4 Putative flagellar hook-associated protein 2 n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRZ4_TERTT Length = 693 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 104/427 (24%), Positives = 192/427 (44%), Gaps = 31/427 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D ++ LT ++A I +++ +++S +G L SAL T Q A Sbjct: 7 IQSLGAGSGIDTKNLTKQLTEIERAAPQNRIDSKRDKAESQISDFGLLSSALATLQDAAK 66 Query: 63 ALSKADLFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ D + + + + + T G Y +V +A +Q+LT+ + D T Sbjct: 67 VLTDPDGMFSKTASYTESTALVPTGLDTTVQPGSYNFTVEDIAASQSLTSLSFSDPTDAV 126 Query: 121 I----------------ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGV 164 D + + I I + N+SL G+RDAIN+A GV Sbjct: 127 GEGVLTFRFGNVAVDGAGAMLGTNGFTPDLDTEEVQITIDSENNSLEGLRDAINDADFGV 186 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVS------GDDALQSFMGYDASASSNGMEV 218 A+I+N G Y L +T+ ++G++N + +S + D+ + + +++ + Sbjct: 187 QATIVNDGLNGYVLQITA-ESGVNNQLEISAAESGGTPTDNDNTGLSRFTFNETASQLTQ 245 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKD 277 A +A LT+N + I SNTI D +E +++++ G+ T+T++ D + A+ I+ Sbjct: 246 LQAGADAHLTLNGLNIYRESNTIDDIVEGLSMDVLQAAPGDKVTITVSDDKAFAEQNIRA 305 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 +V AYN +D T + G+L D+ +++ +Q+++ +++ V Sbjct: 306 FVEAYNLFLDAVKPAMGITDQENDEGESVKVTGSLANDALAKSMMSQIRTTIASAVPGIG 365 Query: 336 -SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 +S+ +L IGI T DG + +D + + K+ V L T I S+ Sbjct: 366 DASFSSLGAIGIRT-ELDGTMSIDEETFGKTMDKNFEDVQKLFAPANNTTDSQIFINSSN 424 Query: 395 TSWLSTT 401 S Sbjct: 425 ARTASGD 431 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 102/281 (36%), Gaps = 16/281 (5%) Query: 195 VSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLND 254 + D+ +A +S +V V Q ++ ++ AI + + ++ Sbjct: 411 NNTTDSQIFINSSNARTASGDYDVVVTTQPSKGSLAGGAIAAGFPNFDTSGKTHEFTVDV 470 Query: 255 VTTGNQTLTITQDT----SKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNG 310 + TLT+ D + A++ +N+ ++L +S+T D +S+ Sbjct: 471 NGVSSGTLTLAPDVYASQDEMALALQSLINSDSTLAAANASVTVSYDADNNRFEFTSTKY 530 Query: 311 ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADK-LTAALKKD 369 + ++ T L + L +V++ + T +G + L +L + Sbjct: 531 GASSNVSITTASADLTTDLGLSVATGTAGT-----TVAGTVNGVAAFGSGNVLLPSLGQP 585 Query: 370 ASGVGALIVGDGKKTG------ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 G+G +I + + + +L + G+I + +L L D Sbjct: 586 GEGLGLIIGENATSATVSFSRGFAGELEDLIDGFLGSKGLIATRETNLEASLEDLDDDQE 645 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 A R+ A R QF ++ ++ LN++ ++ + Sbjct: 646 ALDRRMTAYEERLMNQFIAMERILNGLNTSGGFIENLIDTL 686 >UniRef50_C6WV81 Flagellar hook-associated 2 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WV81_METML Length = 561 Score = 217 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 143/432 (33%), Positives = 236/432 (54%), Gaps = 38/432 (8%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 ++ GVGS LD++SI+ SL + +KA LT I+ Q++++ +++SAYGTLKSAL+TFQT+ AL Sbjct: 3 TTSGVGSVLDVTSIVSSLMSVEKAPLTKIATQKTAYQSQISAYGTLKSALSTFQTSVNAL 62 Query: 65 SKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 S F+A S TSS T+ +A++ G A G Y I+V+ LA++Q L + + T Sbjct: 63 SSLSKFNAQSVTSSNTSVLTASSNGTATVGSYDINVSQLAKSQKL-SVGGFSSVSDVVGT 121 Query: 124 SDSKLTIQQ----------------GGDKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 ++ K I I I ++N++L+G+RDAIN A A V+A+ Sbjct: 122 GSLTISFGTFTPEVAVPFTASSFAPNTAKSDINITIDSSNNTLAGVRDAINAANASVNAT 181 Query: 168 IINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA---------SASSNGMEV 218 I+N G RL +TS DTG N++ ++V+ D + + + + V Sbjct: 182 IVNDGT-TNRLVITSKDTGEVNSLKIAVTDSDGNNLDASGLSKLAYDPQATAGNGKNLTV 240 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 A+NA L ++ + I SSN+ISDA++ +TLNL +T GN L++ + +T++ Sbjct: 241 LQDAKNALLKIDGIDIVKSSNSISDAIDGVTLNLLGLTAGNALNLSVATNQDAVKTSVSS 300 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV-SSS 336 +V+AYN L T SLTK+ D +NGALLGDST R++ Q++++++ + + S Sbjct: 301 FVDAYNKLDTTLRSLTKF-------DETGQANGALLGDSTARSVINQIRAVMNTAINNGS 353 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 S +L QIG++ DGKL LD+ K +A+ + + + +L + T + S+ + Sbjct: 354 SVNSLTQIGVSFQ-RDGKLSLDSTKFASAVSTNFNDIASLFAASARATDPQVSFVSSSSK 412 Query: 397 WLSTTGIIKAAT 408 T + Sbjct: 413 TKEGTYAVSVTQ 424 >UniRef50_Q30U48 Flagellar hook-associated protein 2-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30U48_SULDN Length = 462 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 211/479 (44%), Gaps = 32/479 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 ++ISSLG+GSG+ + ++D L A + + P+ N+ + K AY L S + TF+ + Sbjct: 3 SNISSLGIGSGVLTADVIDQLKEADTSRIVKPLENKITLNNQKQDAYKLLDSLMKTFKAS 62 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +ALS +F + S SS A + +++ LA+ + T Sbjct: 63 ASALSYDTIFDSKSVKSSGKA-EVKVDAGSTVESFSLETVALAKKDITKFGSVATPAST- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV 180 IA+ L I T +SA S++ I A + VSAS++ GNG Y L + Sbjct: 121 IASGAGVLKINNFEIPYDGTTTLSALAQSITEI------AGSSVSASVLQTGNGSYNLVL 174 Query: 181 TSNDTGLDNAMTLSVSGDDALQS-------FMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +S TG A+++S + D + F Y+A + NG E A +A N +A Sbjct: 175 SSKSTGASQAISVSDTDDGTAGAGSLNAALFDPYNAITNPNGYEKVQTASDATFKYNGIA 234 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 + ++N +SD + + + L + + I+QD++ +K + ++YN+LI +T Sbjct: 235 MTRATNEVSDLILGVNIKLKQEGDFSL-VDISQDSTAISDELKLFTDSYNALIANLHDMT 293 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDG 353 D + + G G+S +++I L +++ +++ +L GI D G Sbjct: 294 -------LKDEATGAEGIFNGNSFVKSISRDLTRTITSLNTNN--NSLINYGIDID-RSG 343 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKK-----TGITTTIGSNLTSWLSTTGIIKAAT 408 K+ + L LK+D V G TG TT+ L S+ ++ Sbjct: 344 KMSFNKATLETKLKEDPDAVKLFFTGGTNSEGNKVTGFFTTVDEKLKSYTGYGNLLSNFE 403 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + L+K++ AA +D + ++FT D +++ +NS S L + +N+ Sbjct: 404 TDLKNEGKSLSKNHAAAKASLDTRYEIMAKRFTAYDGMISRINSQFSSLQMMIDAEANN 462 >UniRef50_A4G682 Putative flagellar hook-associated protein 2 FliD n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G682_HERAR Length = 662 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 212/410 (51%), Gaps = 35/410 (8%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 VGS +D+++I++ L A++ L ++ +++S ++LSAY +L SAL+TFQ L+ Sbjct: 5 VGSAMDVNAIVEQLMVAEQKPLKLLATKEASHKSRLSAYSSLSSALSTFQGKLADLTNLS 64 Query: 69 LFSATS-TTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 F + +TS + T A AG+Y I VT LAQAQ+L++ + + + + Sbjct: 65 RFQKNTISTSEAGIATVTAGSTAKAGQYNIDVTQLAQAQSLSSAGQASANGSIGSGATTT 124 Query: 128 LTIQQGG--------------------DKDPITIDISAANSSLSGIRDAINNAKAGVSAS 167 +T Q G K+ +I I +N+SL GIRDAIN A GV+AS Sbjct: 125 ITFQFGTIAGGTLTGGSYSGASFTSAAGKNSGSITIDGSNNSLQGIRDAINKADLGVTAS 184 Query: 168 IINVG-NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 I++ G + +RL +TS +TG ++++ ++V GD AL S + D + + + A ++A Sbjct: 185 IVSDGSDTPHRLVLTSTETGANSSLKITVDGDAALSSLLSQDP-VGTQQLRENAAGKDAL 243 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 T++ + I+N SNT+ +E + + L + G T+++T+DTS +A+ +V AYN L Sbjct: 244 ATIDGIEIKNPSNTLDKNIEGLNITLAKI--GKTTVSLTRDTSSITSAVNAFVTAYNELH 301 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQI 344 T T Y ++++ + G L+GD+T RTIQ ++ M S K L+QI Sbjct: 302 GTLKYQTSY-------NAETKTGGPLVGDATARTIQLGIQRMFSTQPEGLTGELKNLSQI 354 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 GI+ DG L LD KL A+ K +G L T S+ Sbjct: 355 GISFQ-KDGTLALDNAKLQTAVTKFPDDIGRLFATAAAPTDSLVKYASST 403 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 52/86 (60%) Query: 381 GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQF 440 G T + L ++L ++G+I TDG+++ + +L A + R+ ARY++Q+ Sbjct: 574 DFSRGYATNLQGLLGNYLGSSGMIAGRTDGINENIKQLNNQRTAINTRLIDIEARYRKQY 633 Query: 441 TQLDVLMTSLNSTSSYLTQQFENNSN 466 + LDVL++++ +TS+YLTQQ SN Sbjct: 634 SSLDVLLSNMGATSNYLTQQLAALSN 659 >UniRef50_Q21IM1 Flagellar hook-associated 2-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21IM1_SACD2 Length = 692 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 210/427 (49%), Gaps = 35/427 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I S+G GSG+D ++++ LT+ +KA I + +K+S +G LKSAL+T + A Sbjct: 7 IQSIGAGSGIDTNNLVKQLTSIEKAAPQNRIDKTRDLTESKISDFGKLKSALSTLKDATK 66 Query: 63 ALSKADLFSATSTT--SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L+ + + + + S + G YT V +A++Q+L++ + T T Sbjct: 67 TLTDPEGLFSKTASFTESDALVPVELGTDVQTGSYTFEVNAIAKSQSLSSTSFASITDTV 126 Query: 121 IATSDSKLTIQQGG----------------DKDPITIDISAANSSLSGIRDAINNAKAGV 164 + LTI+ G ++D I I I ++N+SLSG+RDAINN+ +G+ Sbjct: 127 ---GEGTLTIRLGAVTTDVNGEMTAFSADVEEDAIEIVIDSSNNSLSGLRDAINNSDSGI 183 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVS------GDDALQSFMGYDASASSNGMEV 218 A+I+N G+G Y+L + + +G N + ++V+ ++ + + + + + Sbjct: 184 QATIVNDGSG-YKLQIKAA-SGAANELEITVAESGGTPTNEDANGLSRFAFNTTVSQLTE 241 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKD 277 + Q+A LT+N +AI +N + D +E +TL++ G + +TI+ D + A+ I+D Sbjct: 242 NQGGQDASLTLNGLAITRETNKVEDVVEGLTLDILKAAPGEEINITISDDKAFAEQNIRD 301 Query: 278 WVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-- 335 +V AYN ++ + + V+ ++ G+L DS ++I +Q++S +++++ Sbjct: 302 FVEAYNLFLEVLEPIFGTSEVENDEGETTTVTGSLAKDSLAKSILSQIRSTIASSIPGLG 361 Query: 336 -SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNL 394 S + +L +GI T DG L +D D ++A + V L + I S Sbjct: 362 NSDFTSLTNVGIRT-ELDGTLSIDEDDFSSAFDTNFEDVQKLFAPTTYSSSGEIFINSYG 420 Query: 395 TSWLSTT 401 + + Sbjct: 421 KNTTAGE 427 Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 38/87 (43%) Query: 378 VGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 G + +TS+L+ G+I D + L+ L +D + R+ A R Sbjct: 599 GTVNFSRGFAGELDELITSFLTAGGVIDLREDSLESDLDDLDEDQTSLDRRMTAYQERLI 658 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENN 464 +QF ++ ++ SLNS+ S+L Sbjct: 659 QQFISMERILNSLNSSGSFLDNLVNTL 685 >UniRef50_A6FHX7 Flagellar capping protein n=1 Tax=Moritella sp. PE36 RepID=A6FHX7_9GAMM Length = 465 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 120/498 (24%), Positives = 211/498 (42%), Gaps = 69/498 (13%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA ++ G+GSG+DL SI+ + A+KA ++N++ S T +LS GTL++AL FQ Sbjct: 1 MAGMTMAGMGSGMDLESIIKTFVTAEKAPKEARLNNKEISITTELSGVGTLRAALADFQN 60 Query: 60 ANTALSKADLFSATST-------TSSTTAF------------SATTAGNAIAGKYTISVT 100 L D F + T + ++A + T G G + + VT Sbjct: 61 ITNKLGNTDTFYQSKTNIQYQGRSVDSSAVRQAGESNAILPITIETKGVVPKGSFDVKVT 120 Query: 101 HLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA 160 LAQ L + D T + + G D + ++++ +L I+ IN A Sbjct: 121 KLAQGARLESDFMPDRT---VKLGQGIMYFDAGKDSFEVDVNVA---DTLQDIQKKINEA 174 Query: 161 --KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV 218 G+ A+IIN G ++ TS+ TG+ N +T+ S A + V Sbjct: 175 PNNYGIGANIINSDLGA-KMVYTSDKTGVANDLTVFTSDSSL----------AMISSKMV 223 Query: 219 SVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN--QTLTITQDTSKAQTAIK 276 AA +A + ++ I SNT + A+ +T+ N +T N + D + + Sbjct: 224 GKAASDAIIAIDGNIITQESNTFTHAVSGVTITANSLTANNDVVNFSTATDHAAVSDLVH 283 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 ++++ YN LI T ++LT G+L DST R+++ Q++S+ V+ + Sbjct: 284 EFIDGYNRLISTINTLTD------------PETGSLKFDSTARSVKQQMQSITGGVVNGA 331 Query: 337 S--YKTLAQIGITTDPSDGKLELD----------ADKLTAALKKDASGVGALIVGDGKKT 384 S TL GI+ G L ++ A +L A+ +G L G+ Sbjct: 332 SSKLNTLYAAGISL-EEGGVLAINPFGSHGSQSGAQRLDHAVNNALDDLGKLFSGN---N 387 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G+ I + L + L+ G I ++ L L D + I + ++++T +D Sbjct: 388 GVAAQINAVLDNSLNNKGTITQRQSLLNTNLRSLEDDRDKLDRHISSYEDTLRKKYTAMD 447 Query: 445 VLMTSLNSTSSYLTQQFE 462 ++ N+T Y+ Sbjct: 448 NTVSRYNATGDYIRNVLG 465 >UniRef50_D0I428 Flagellar hook-associated protein FliD n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I428_VIBHO Length = 520 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 110/533 (20%), Positives = 220/533 (41%), Gaps = 89/533 (16%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 + G+GSG+D +++ ++ AA++A + ++ Q+ TA++ A ++ AL +F+ Sbjct: 1 MLMTGLGSGIDYEAMIQAIVAAERAPVENQLNRQEGMNTAEMDALKEIQGALNSFRNTVE 60 Query: 63 ALSKADLFSATST----------------TSSTTAFSATTAGNAI--------AGKY--- 95 L+ + S F T A G Y Sbjct: 61 DLNAYTELNKLKAELSNTDVMGVAVSGGAVSGEYNFDVTQLAQAARDKVLTMKKGSYLTT 120 Query: 96 ----------TISVTHLAQAQTLTTRTTRDDTKTAIATSD-------------------- 125 T+SV A A L T+ + T Sbjct: 121 GKVEFTTDKGTVSVDIAALATELKTKEESKKAQYRTDTLTEVAKEHNIDTSEDGWEAKAE 180 Query: 126 --------SKLTIQQGGDKDPITID-ISAANSSLSGIRDAIN--NAKAGVSASIINVGNG 174 +K + + I + ++ AIN G +++ G+ Sbjct: 181 AKLAEDQEAKASFDARIKEYDQNIARYDEKGVTAEELQSAINRHENADGAKVTLVQTGD- 239 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 + + + + DTG+ NA+ + + G D + S G+ AAQ+A + N+ + Sbjct: 240 QLTMVLNAKDTGVANAVKGLSVTNVTAKDDNGSDVAVSDLGV-PLQAAQDAVVKFGNMEL 298 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 + +N + + ++ ITL L + TG + I +D + +K ++++YN +++T ++ TK Sbjct: 299 TSPTNKMENVIDGITLTLKE--TGTVNVNIQRDEDGVKETVKTFIDSYNKVVETVNTYTK 356 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 + AL GD+ R++ ++L+S++S+ +SS+ TL+Q+GITT DG Sbjct: 357 SSE---------EMAAALSGDAATRSMISRLRSVISDQYASSTLGTLSQLGITT-KMDGT 406 Query: 355 LELDADKLTAALKKDASGVGALIVGDG------KKTGITTTIGSNLTSWLSTTGIIKAAT 408 LEL++DK A++ + + L +GD K+TGI ++ + L + G+ Sbjct: 407 LELESDKFDKAMEDNFDEIAKLFMGDPASSVPEKQTGIMGSMLTVLDDYHKNGGLFDVRI 466 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 D + +L ++ A R++A+ ++ + ++D + +N T S L Sbjct: 467 DRLDADNQRLQEEREALDARMEAKALSLRDYYAKMDSQIAQMNQTQSMLISML 519 >UniRef50_A3WGR1 Flagellar hook-associated protein 2 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGR1_9SPHN Length = 477 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 92/483 (19%), Positives = 191/483 (39%), Gaps = 34/483 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS+ G GSG+D + D L+ A A + + + A++S+ L++ALT +A Sbjct: 9 ISAFGAGSGVDFVQLADQLSEATYAFQRSNLETRNQGLEARISSASLLRNALTQLSSALG 68 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIA-GKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + + + S +T + G Y++ V+ LA +Q L ++ Sbjct: 69 DRVRTGELAPRANVSDPAIVDVSTTSGVVPRGSYSLEVSQLADSQLLISQAYTSGDDLVG 128 Query: 122 ATS-------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 + + T + + + I + A++ ++ + I++A G + + GNG Sbjct: 129 EGTLRIRFGEVNGATFTEDAGQAALEIAVDASD-TVQTLAAKISSASGGALQAYVAEGNG 187 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDAS-----ASSNGMEVSVAAQNAQLTV 229 +L + D G N + + L + D + +++ ++ +A++A T+ Sbjct: 188 GAQLVIKGED-GASNGFVVEATSAALLPTATPGDLTYLAWDPATDAGQLRQSARDALYTL 246 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 + V + SNT++D E ++ +L G T+T + DTS + D++ A N L Sbjct: 247 DTVEYSSPSNTVTDLPEGLSFDLKATNVGAPTTITFSNDTSAITDVMNDFLVALNDLAGL 306 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQI 344 + + G L D R ++ L + + V + TLA + Sbjct: 307 LAE------------EATPLGGTLGNDPGARELKRDLARLTNEVVMPGAAPGEPSTLADL 354 Query: 345 GITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 G+ T +G+ ELD ++L L + A+ T + + S G + Sbjct: 355 GLKT-TREGRFELDTERLNETLSNNPEAAAAMFTTGPFGLFATIDRLARDNTTRSDPGSL 413 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + + + + + +++ + R + +++ ST S+L QQ E Sbjct: 414 AGSVSRYEAQVERNSDKLDRIAEQQENLRERLTRDLVAAERRISASQSTLSFLEQQIEAW 473 Query: 465 SNS 467 + S Sbjct: 474 NGS 476 >UniRef50_B1K3B5 Flagellar hook-associated 2 domain protein n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3B5_BURCC Length = 453 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 110/452 (24%), Positives = 183/452 (40%), Gaps = 37/452 (8%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS-ATTAG 88 + + +Q++ + L+ AL +FQ A LS + S A AT + Sbjct: 24 VQRLKSQKAGNAIAQAGLTRLQGALNSFQNALKGLSGVGGIVKQKASLSNQALGEATASA 83 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITID----IS 144 N +G+Y V LA A + + T L G+ + + + Sbjct: 84 NPQSGRYAFFVKQLASAHQVAFKGLSSYAAKDAGTLGIAL---ATGESFRVDLSAANADA 140 Query: 145 AANSSLSGIRDAINNA---KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDAL 201 + N S + + AIN A K VSASI+ + GE RL +TS TG +A++L SG Sbjct: 141 SGNVSPAELARAINQAVDNKGKVSASIVTI-EGEQRLVLTSGGTGEASAISLDTSGIGDA 199 Query: 202 QSFMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDV--- 255 ++ S + A++A + V I+ SSNT + ++ +++ Sbjct: 200 A-----LSAVLSGPPDELSMARDAIFKLGGESGVDIKQSSNTFTG-IQGVSVTFKQSMVE 253 Query: 256 TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 L I D A++ +V+AYN + + LTK D G +GD Sbjct: 254 GDAPLLLDIKLDQVGTTDAVQAFVDAYNKAMGVLAELTKVNPDDPSN------AGPFVGD 307 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 + +R +Q ++ ++L TV + + GI+ D GKL LD KL AAL K+ +G+ A Sbjct: 308 AGVRHLQQRMNALLRATVGE---RRMLDYGISAD-RAGKLSLDTGKLNAALAKNPNGLDA 363 Query: 376 LIVGDGKKTGITTTIGSNLTSWLST-TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVA 434 L + G+ + + L +W S+ G +K + L K + + Sbjct: 364 LFA--DPEKGVVARMDAYLKTWTSSVDGQVKRRQESAELIEQSLKKKERSLEVQYRQVYG 421 Query: 435 RYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 RY QFT++ L + T L N Sbjct: 422 RYLTQFTRVAELQKRMEYTKQLLDDLLSGNKK 453 >UniRef50_D2UAA1 Probable flagellar capping protein n=1 Tax=Xanthomonas albilineans RepID=D2UAA1_XANAL Length = 454 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 128/463 (27%), Positives = 225/463 (48%), Gaps = 36/463 (7%) Query: 13 LDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLF 70 LD+ + + +L A ++A I+ ++ TA+LSA GT+K A++ QTA +LS AD Sbjct: 15 LDIPTFVANLVAQERAPQQDRINKDGTASTAQLSALGTIKGAMSNLQTAIKSLSTSADTG 74 Query: 71 SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 + +T + ++A+ NA AG Y + V LAQAQ LT+ + LTI Sbjct: 75 AFNATVADGAGYTASVTSNATAGNYNVEVVSLAQAQKLTSAAYAS----TATVGNGTLTI 130 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLD 188 G + +TI S+L+ I AIN A GVSAS++N +G + L + + TG Sbjct: 131 AYGTNSLNVTIVP---GSTLNDIAAAINKAAGGKGVSASVVNADDGNH-LVLNAVSTGTA 186 Query: 189 NAMTLSVSGDDALQSFMGY--------DASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 A+T+ SG D + + Y +S+S++GM + AA +A + V+ +SSN+ Sbjct: 187 GALTVKASGGDGGLAALTYPSSSSSSSSSSSSASGMTQNTAATDAVVRVDGFTRTSSSNS 246 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 I+D + LNL G+ L I D S + + V+AYN+ +S + Y Sbjct: 247 IADLAPGVVLNLTKAIPGSTFKLNIANDNSALKGNLTALVSAYNATNTVLNSSSDY---- 302 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 ++ + ++ L GD+ +R +Q L+ +S + L +G+T D DG + D+ Sbjct: 303 ---NATTKTSSPLTGDAMVRGLQQSLRKQVS-----DNITALGALGVTID-KDGVMSFDS 353 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 K +A+ +++ ++ +G T T+ + + T G + T+ ++K ++ LT Sbjct: 354 GKFDSAMASNSASAKSMFGANGSFTSGMNTLLN--GNLDGTNGTLTQRTNALNKHISDLT 411 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 + R+ +Y +F+ ++ L+ + S S L QQF Sbjct: 412 DQLSDLDKRMSTLSDQYTARFSAMNTLVAQMQSIQSSLAQQFG 454 >UniRef50_C9A954 Flagellar hook-associated protein n=4 Tax=Enterococcus RepID=C9A954_ENTCA Length = 473 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 126/484 (26%), Positives = 210/484 (43%), Gaps = 44/484 (9%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 ++LG SG+ S ++ L AA T N+ +S A+ +A+ + + LT F + AL Sbjct: 12 TTLGSYSGV-TSEDIEKLLAADAINKTRAENKITSLKAQKTAWSDISTRLTNFLSKVDAL 70 Query: 65 SKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 K D + + +TT++++ S A G Y + V LA A +T +KTA+ Sbjct: 71 QKDDAYQTKKATTTNSSIASIAGTTEAPEGTYDLKVNQLATATKVTGSQVAQSSKTALNV 130 Query: 124 SD----SKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG--VSASIINVGNGEYR 177 S + + + G +I+I+A + SL + IN+ V+ASI++ R Sbjct: 131 SGQLSLTSSEVDEDGKPITASIEITAED-SLKDVAAKINSQSKTTFVAASIVDN-----R 184 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L +T+ G N + Q A ++ + I Sbjct: 185 LILTNTKMGDKN-----------FLIDGNAAEGLGIGSTATTTQGQPAIFELDGMKITRD 233 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 SN+++D ++ +TL L + + TL++ DTSK A++ V+ YNSL+ Sbjct: 234 SNSVTDVIDGVTLTLAKKSEEHVTLSLANDTSKVVDAVQGLVDQYNSLMSFIDD----NL 289 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 S+++ G L+GDS L +QTQL+++++ S S T ++GI+T +DG L L Sbjct: 290 TVGDPSSENNKTGTLVGDSALTRLQTQLRNLITIPAVSGSKLTANKLGISTVDNDGTLGL 349 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL---------------STTG 402 D KL AL +D + V + K T + T + + G Sbjct: 350 DTTKLKEALAEDPAAVKSFFYASTKTKEADGTASTKETGYTLALKELANSYVVNTSANKG 409 Query: 403 IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 II + T+ L K D + + RY FT+LD +M + SYL+ QF Sbjct: 410 IIATKSATYDSTIKDLNKQITRFDDILAMKKERYITMFTKLDSVMMEAENQLSYLSNQFA 469 Query: 463 NNSN 466 N SN Sbjct: 470 NTSN 473 >UniRef50_B9Z4T2 Flagellar hook-associated 2 domain protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4T2_9NEIS Length = 444 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 110/464 (23%), Positives = 192/464 (41%), Gaps = 36/464 (7%) Query: 13 LDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFS 71 ++ + + L + +S Q SS A+ L+SAL F++A T+LS Sbjct: 4 INPTQMATQLANLYVQQAQQRLSMQNSSAKARSDGLSKLQSALQDFRSALTSLSAKKSMV 63 Query: 72 ATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 A S + S + A + + +G A AG Y++ V LA AQ L S LT+ Sbjct: 64 AMSASFSQSNAGTVSASGTAQAGSYSLFVEQLASAQQLAYDGVS-------GASGGTLTV 116 Query: 131 QQGGDKDPITIDISAANS----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSND 184 GG+ + + + + + S I AIN A AG +++ NG RL +TS Sbjct: 117 SLGGNPFSVDLASADRDGDHNLTTSEIALAINQAAGNAGKVNAMVLTANGISRLVLTSGK 176 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAIENSSNT 240 TG N + + S + +S+ AQ+A++ + V ++ +SNT Sbjct: 177 TGAANTIGVDASQASDPALQTAFASSS------QLSPAQDAKVWLGGQGSGVLMQQASNT 230 Query: 241 ISDALENITLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 + A++ +T+ ++ G TL + + S ++++V+AYN+L+ + SLT D Sbjct: 231 FT-AIDGVTMTFGAMSAGQSLTLNVARSDSDTGGNVQNFVDAYNTLLKSLGSLTASGGAD 289 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 + G D+ +R+++ L +++ + LA +GIT DG L LD Sbjct: 290 -----KDQKAGPFATDAGVRSLRDHLNTLIRQSFGGV---RLADMGITA-ARDGTLSLDR 340 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLT 419 KL L + + G + +++G+I D + N L Sbjct: 341 SKLDKLLADQPTALDGFFNGSNADGLLAQAGSYLDKWLNASSGLITQRKDSAQRMQNDLD 400 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++ D RY QFTQL + ++ T L F Sbjct: 401 AQQTRIDNQYDQAYKRYLAQFTQLQTMQAQMSQTLDSLNSYFSQ 444 >UniRef50_Q4UUH2 Flagellar protein n=9 Tax=Xanthomonas RepID=Q4UUH2_XANC8 Length = 442 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 32/467 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MAS+ S SGLD+ +++ +L + QK I+ ++ T +LSA +KS++TT ++ Sbjct: 1 MASVIST-SSSGLDIPTVVSTLVSRQKDPEQARINKAGTAATTQLSAISQIKSSMTTLKS 59 Query: 60 ANTAL-SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A + S AD + ++ + F+ATT +A G Y++ V LA AQ L + D Sbjct: 60 ALDKVVSSADTNAYKASVPTDAGFTATTTSSAAPGNYSVEVVSLASAQKLASGAFTADA- 118 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 LTI G + I + L+ I AIN A GV+AS++ +G++ Sbjct: 119 ---TVGSGTLTIGYGDKSITVDI---SGTDKLADIAAAINKAAGGKGVTASVVTANDGQH 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L + DTG A+T+S S G + + G+ VAA +A + V+ + Sbjct: 173 -LVFNAVDTGTKGALTVSASDPSLSALTFG---AGVTGGLTQQVAAADALVRVDGFERTS 228 Query: 237 SSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 SSNT++D + + LNL G TL +T DTS + + + AYN+ + + Y Sbjct: 229 SSNTVTDIVPGVVLNLTKAAEGTKVTLGVTADTSGLKGNLTAFAAAYNTANTLLKNSSSY 288 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 ++++ + AL GDS +R +Q QL+ +S S L +G+T D DG + Sbjct: 289 -------NAETRTASALTGDSLVRGLQQQLRGQVS-----GSISELKALGLTID-KDGVM 335 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 D K A+ D + D K T + + G + +D ++K + Sbjct: 336 SFDGGKFDTAIAADGGAAAEALGKDSKFGSGLTKLLDA--NVNVNNGTLTLRSDSLNKQI 393 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 D + R++ RY QFT ++ +++ + + L+ Sbjct: 394 KGFEADLDNLDARMEKLTDRYTAQFTAMETMISKMQGATGSLSSLLA 440 >UniRef50_Q2RZA7 Flagellar hook-associated protein 2 C-terminus n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZA7_SALRD Length = 494 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 102/502 (20%), Positives = 210/502 (41%), Gaps = 56/502 (11%) Query: 5 SSLGVGSGL--DLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +S+G +GL ++ ++ + N++ S L L++ Q+ + Sbjct: 3 TSVGPSAGLSPKYQRLIQRTLRIERQPKLELQNERQQKKNTKSLVSDLDGKLSSLQSQLS 62 Query: 63 ALSKADL--FSATSTTSST--TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L+ F + +++ FS + A G Y+++V LA ++T D Sbjct: 63 TLTDTTSSPFDGRNASAAEGTEGFSVSADETASTGSYSLAVNRLASEDGRVSQTFDADKS 122 Query: 119 T-----------AIATSDSKLTIQQGGDKDPITIDISAANSS----LSGIRDAINNA--- 160 + S T + I + + + ++ LS I+ AI++A Sbjct: 123 NLSDFFTNNGAQTFSVDVSTPTDSNPDARTSIDVTVDSDGTNNKEVLSDIQSAIDSAFQS 182 Query: 161 ---------KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFM--GYDA 209 SAS+IN +G RLS+ S TG ++ S S ++ L Sbjct: 183 AVDDGTLSADQRPSASVINPTSGTARLSLRSQQTGYQGRLSFSDSSNNLLSELQVNADQI 242 Query: 210 SASSNGMEVSVAAQN-------AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTL 262 + + G E++ + ++ +N + +SN ++DA++ +T+NL + + Sbjct: 243 ADDTQGGEITEVGTDEASSKLTSEFELNGLTFTRNSNEVTDAVDGVTMNLEEANGTASSF 302 Query: 263 TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ 322 +T D AQ+ +K++V+ N +I + T + ++ G L DST R + Sbjct: 303 EVTADEEGAQSVVKNFVDRVNEVITFLNEKTNV-------NPENGERGELADDSTFRRLS 355 Query: 323 TQLKSMLSNTVSSS--SYKTLAQIGITTDPSDGKLEL-DADKLTAALKKDASGVGALIVG 379 QL++ + V TLA IGI + DG L+L D D L A++++ + L G Sbjct: 356 RQLRTDATRPVEGQPEGLNTLADIGIEAN-RDGTLKLTDEDALRTAVRENQGALKDLFAG 414 Query: 380 DGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 G+ T + + + T G++ + D + +++++ N +R+ + + +EQ Sbjct: 415 P---DGVATRMKERVDQYADTGGLLDSRQDSIDSSIDRIDDRINGLDERLQRREQQLREQ 471 Query: 440 FTQLDVLMTSLNSTSSYLTQQF 461 + +++ + SL S ++Q+ Sbjct: 472 YAEVESTIRSLASQQQSISQRL 493 >UniRef50_B0KR01 Flagellar hook-associated 2 domain protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KR01_PSEPG Length = 463 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 121/479 (25%), Positives = 226/479 (47%), Gaps = 33/479 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GSG+D +I+DSL AAQKA I+ Q T LS+ G +++AL F+ Sbjct: 2 MAGTTVSGIGSGIDTQAIVDSLVAAQKAPKQAQINTQTLKATTTLSSIGKIQAALDAFRG 61 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A T ++ + F S +S + T A G + + V LA A ++T+ + Sbjct: 62 ALTNMTDTNSFGGLSLKSSDEKVATVTMGTGAANGSFKLIVDKLATASKVSTKVYANGAG 121 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 + + + T+ + + + A ++L +RD+IN+ AG+SA+++ NG Sbjct: 122 SVVNPGSTPTTLTMTQNGKAYDLSV-PAGATLQQVRDSINSQFGVAGLSANVLTDANGS- 179 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL VTS G + +TLS + S G V +A+ T++ VA+++ Sbjct: 180 RLVVTSTKMGEGSDITLSGN-------------SGIDTGYTVVEEPADAEYTLDGVAMKS 226 Query: 237 SSNTISDALENITLNLNDVTTGNQT--------LTITQDTSKAQTAIKDWVNAYNSLIDT 288 +N I+DA+ + + L + N T L++T ++ ++ +K +++ YN+L+ Sbjct: 227 KTNDINDAVSGLNIKLVGTSPTNATSGEKTATILSLTTSSATLKSGLKGFIDTYNALLTV 286 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITT 348 ++ TK T G S + AL GD+T+RT+ T ++ L+ + + K+LA G+T+ Sbjct: 287 MNAETKVTKNADG----SMTAAALTGDATMRTLMTSIREELNAVSGNGTLKSLAAFGVTS 342 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 G L LD K A +A+ + ++ G + ++TG + + Sbjct: 343 AQDGGALSLDDKKWEKAASTNAADLTSIFNGKDGLLARLQKVTEPFAK--ASTGTLAERS 400 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 +S++L KL + + R++A ++++ +D L+T L S + + S Sbjct: 401 KVLSESLTKLKTEQDTLDARMEALKKSLQDKYNNMDTLVTQLRQQQSSVLSTLNALNKS 459 >UniRef50_Q1YVA5 Flagellar hook-associated protein FliD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVA5_9GAMM Length = 482 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 119/480 (24%), Positives = 200/480 (41%), Gaps = 37/480 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPI-SNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +++L GSG+D+ S+ +LT A+K + + A++S YG + S L+ QTA Sbjct: 21 MTALDAGSGVDVVSLARNLTDAEKVPKQALIQTAIDNAEAQVSGYGLISSQLSLLQTAFE 80 Query: 63 ALSKADLFSATSTTSSTTAFSATT-AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 +L+ + + + ++ TA T G + G Y ISV LA Q + + Sbjct: 81 SLNDSSEVANSYGATTDTALGFTAFDGTEVDGSYAISVEKLALEQIMISDEYNASDY--- 137 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANS-SLSGIRDAINNAKAGVSASIINVGNG--EYRL 178 A I T +S + +G+ AIN A GV+AS+++ G G YR+ Sbjct: 138 AIGTDSFDISITVGSSSTTTTAITVSSLTPAGVVSAINTADTGVTASLVDTGTGGTNYRI 197 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 +T TG + T+S + D AAQ+A++ + + I S Sbjct: 198 ILTGK-TGSEGVFTISSNPDLGFGDTGNT-----------LQAAQDAEIEFDGLTITRDS 245 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N SD + TL L + TT T+ I DTS QT +++ V YN D LT Sbjct: 246 NEFSDVVTGATLTLYETTTSAATVAIYSDTSALQTKLENIVTVYNDFRDLMDELT----- 300 Query: 299 DAGADSQSSSNGALLGD-STLRTIQTQLKSMLS--NTVSSSSYKTLAQIGITTDPSDGKL 355 + D +G L D ++ R I Q++ L ++ +S IG+T + G L Sbjct: 301 TSTIDEDIEHSGDLQRDFASARYITNQIRDALREDSSTASGEISAFRDIGVTINSK-GDL 359 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTG--------ITTTIGSNLTSWLSTTGIIKAA 407 D A++ + + V ++ + + + S + + L++ GI+ Sbjct: 360 TFDEATFDEAVEDNYNDVVMMLTANTNDQTLYGSSSVGMAQDVASVIEALLASDGIVATR 419 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + ++ R++ RY QFT ++VL LN YLT Q E S + Sbjct: 420 ESNAEDLGEEYEEELATLETRMELLYDRYISQFTAMEVLTEKLNGIKDYLTGQLETLSKA 479 >UniRef50_Q2RKF6 Flagellar hook-associated 2-like n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKF6_MOOTA Length = 632 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 106/408 (25%), Positives = 171/408 (41%), Gaps = 55/408 (13%) Query: 90 AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS-DSKLTIQQGGDKDPITIDISAANS 148 + G + SV + T T + T +A TI G + ITI+ N Sbjct: 241 TLNGDFGASVIPMLADWTATFQPAEPVTSDTVALGLSGSFTITVGSETRNITIN---END 297 Query: 149 SLSGIRDAINN----------AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 SL I IN A V+AS+I+ +RL +TS TG + A++ S D Sbjct: 298 SLQSIASLINAVPSEGETGPGAGDIVTASVID-----HRLVITSKTTGSNGAISFS-DPD 351 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG 258 L DAS V A++A TV+ + I S+NTI+D ++ +TLNL VT Sbjct: 352 GVLNKLGLVDASGVILPRAVIQDAKDAVFTVDGLTITRSTNTITDVIQGVTLNLLAVTDT 411 Query: 259 ----------NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSS 308 L I+ DT KA AI+ V+ YNS+++ S+ + Sbjct: 412 NGNGTIEPAETLNLEISHDTQKAVDAIQAMVDQYNSVMEFISTK-------------AGD 458 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTD----------PSDGKLE 356 G L GD TL + L ++++ V+ +Y+T IGI+T +GK+ Sbjct: 459 KGDLQGDPTLARFKNDLWQLMTDRVAGLTGTYQTPWSIGISTGAVVGSGSLTFDRNGKIT 518 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 LD KLT+AL+ D + V A+ + + + S GII + + ++ Sbjct: 519 LDTTKLTSALETDPTAVMAIFTNSSETGLVDKLDSYLTSLVRSGDGIIPSREQSLQNIMD 578 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + DR+ + + + QFT ++ + +L S ++L Q Sbjct: 579 DIDDQIARMEDRLTMREEQLRRQFTAMEQALAALQSQGNWLAGQIAGL 626 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 12/230 (5%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + I G+ SGLD SI+ L ++ LT + +++ + + +A+ + + L++ Q+ Sbjct: 3 SGIYFSGLASGLDTESIITQLMDLERIPLTRLQQRKNQYNVEKNAWHDIYTRLSSLQSKL 62 Query: 62 TALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L A F+ TSS T A +AT A NA AG Y +S+ LAQA + ++ T+ Sbjct: 63 GDLKLASTFTGMKATSSNTLALTATAASNAPAGSYQVSIIQLAQAHKVASQNLVYGTEAQ 122 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIIN-VGNGEYRLS 179 + T T + + + +G+ + A ++++ IN RL+ Sbjct: 123 LLTD----TFTDATYTSSVATLNNLTQDTANGLLKLASGATGSITSNAINVNAANGGRLA 178 Query: 180 VTSNDTGLDNAM------TLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 +T N NA T + Q+ S ++ A Sbjct: 179 LTVNQQERLNANYVYQYRTFDGTTWSEWQTLGNLTGDGSGIFKSHTLTAD 228 >UniRef50_A4BEP0 Flagellar hook-associated protein 2 n=1 Tax=Reinekea blandensis MED297 RepID=A4BEP0_9GAMM Length = 1303 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 125/410 (30%), Positives = 220/410 (53%), Gaps = 28/410 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA I SLG+GSGL S +++ L A++A + + + AK++AY +++ L + Sbjct: 1 MAGIQSLGIGSGLLTSELVEQLVEAERAASDLRLDTRTARVEAKITAYAEVRNMLDGLSS 60 Query: 60 ANTALSKADLFSATSTTSSTT-AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + ++LS+A ++S TSS +A+T+ A G Y I+V +A++ +L ++ Sbjct: 61 SISSLSQAATIQSSSATSSNDSVLTASTSSTAEPGSYRINVDEIAKSHSLASKQYNSVDD 120 Query: 119 TAIATS-------------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVS 165 T + +S L+ +Q D + +I+I++ N++L G+RDAINNA GVS Sbjct: 121 TIGTGTLTFKFGTTNYDTDNSYLSFEQSADSEVTSIEINSENNTLGGVRDAINNADFGVS 180 Query: 166 ASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDA-SASSNGMEVSVAAQN 224 AS++ G G YRL +TS++TG + +M ++ SGD LQ+ A + + ME + + Sbjct: 181 ASVVYDGTG-YRLLLTSDETGEETSMEITASGDAGLQALAYNGAQNTAGTNMEETQKGSD 239 Query: 225 AQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNS 284 A + +N +AI ++ N++ ++ +T+NL + + TL +++D S I +V YN Sbjct: 240 ASVRINGLAITSTDNSLDQVIKGVTINLTETSDSAVTLNVSRDVSDIADKIDTFVEKYNE 299 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTL 341 + LTKY D G LLGD+ LRT+QTQL++ +S + + SSY ++ Sbjct: 300 YKGLYDELTKY-------DPSDEIGGILLGDNVLRTVQTQLRAGISEVITGLTGSSYSSM 352 Query: 342 AQIGITTDPSDG-KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTI 390 +IG++TD +D L + K A+ DA V L+ D + + ++ Sbjct: 353 IEIGLSTDQNDDFNLVFNRAKFEEAMANDAKSVVGLLATDKQASDAQISV 402 Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 63/421 (14%), Positives = 133/421 (31%), Gaps = 40/421 (9%) Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L ++ + + + A T +A +I +T + Sbjct: 911 DVVAKLDSSNQLYFETVSKNGVATETTFGADA-----SIQITSADANANSALGVSAGTPN 965 Query: 119 ----TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSA-SIINVGN 173 T D + ++ N + VS +I +G Sbjct: 966 VNGFDGFGLDKGVYTGFDSQASVSYQADEDGKGRFVISFDNSTNITLSNVSNNAIAQLGM 1025 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 +V + +G D T++ ++ + + + + + Sbjct: 1026 SSSNQAVNDSTSGQDVEGTINGVEATGRGQYLTASEGNEAATNGYLLGGTGSDFSSAEI- 1084 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 I+ S+NT+ ++ + N +T+G +K +NA + Sbjct: 1085 IDGSNNTLKVVIDGVETNTVTLTSGA-----YASGDALAAELKAQINA------DSNLQA 1133 Query: 294 KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK--SMLSNTVSSSSYKTLAQIGITTDPS 351 AVD D +++ G S + ++ ++ + S + + T Q G+ + Sbjct: 1134 ANKAVDVQYDEDTATFGIF---SISKGAESTVRVSEIASGAIDVFGFTTSTQ-GVKGKDT 1189 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKK----TGITTTIGSNLTSWLSTTGIIKAA 407 G +D V GD G+ + S L+ G++ Sbjct: 1190 VG--SVDEAAGL------MLKVTGTRTGDRGSVSYVEGVMKKLDDLFDSILNANGLLTVK 1241 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + ++ + + +R A AR + +F D L++ L +T +LTQQFE + S Sbjct: 1242 EQNLEDEMDDIEVERTEVDERTAAFEARLRSKFLYNDKLISQLKTTEDFLTQQFEAMNAS 1301 Query: 468 K 468 K Sbjct: 1302 K 1302 >UniRef50_Q6LW28 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LW28_PHOPR Length = 514 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 113/527 (21%), Positives = 215/527 (40%), Gaps = 85/527 (16%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALT--------- 55 G+GSG+D S++ ++ A++A ++ Q+ A+ +A ++ L Sbjct: 1 MTGLGSGIDYESMIAAIVGAERAPKENQLARQEGMNHAEKNALQEIQFTLNSFRDKVEDL 60 Query: 56 ----TFQTANTALSKADLFSATSTT-------------------------SSTTAFS--- 83 Q LS D+ SA+ + S + FS Sbjct: 61 NSSRELQKLKAELSNDDVLSASVDSNAVPGEYSFEVTQLAQTQRDQLFKTSEGSTFSKGT 120 Query: 84 -----------------ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSD- 125 + G + +A L K + TS Sbjct: 121 ISFGAVSIDIATVKGDLISAEGGKKTAHHDQVYQDIADKHGLDVVADAAAIKDILETSTN 180 Query: 126 --------SKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGE 175 T QQ G ++ I +++ ++ ++ AIN+ A GV A+++ G+G Sbjct: 181 PDFDQARLDSYTSQQQGYQNTID-RLTSDGVTVEELQSAINSDPANDGVKATLVRSGDG- 238 Query: 176 YRLSVTSNDTGLDNAM-TLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 + + DTG+ NA+ ++V+ A D + NG + A++A + ++ + Sbjct: 239 ISMVLNGKDTGVTNAIGAITVAIAPADIKGNTLDLALPVNGQKSLQTAEDATVQFGSMTL 298 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +++N + + ++ ITLN+ + G + + +D + + IK +V YN +I+T ++ TK Sbjct: 299 TSATNKMENVIDGITLNIKE--KGTVNVKVERDEASVNSTIKSFVADYNKIIETVNTYTK 356 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 + AL GDS R++ ++L+ ++ SS+Y TL+Q+GITT G Sbjct: 357 SSED---------KAAALSGDSATRSMVSRLRGVIGAEYGSSTYNTLSQLGITT-TRQGT 406 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 LE+D KL AL+ D V L +GDG +TG+ + L + G D + Sbjct: 407 LEIDQKKLDKALEDDFDAVSKLFIGDGVQTGMMDKMMVVLDDYHKNGGTYDRRIDQLEYN 466 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 ++ +D R++A+ + + ++D + +N T S L Sbjct: 467 NKQIAEDREKLDSRMEAKTLSLRAYYARMDSQIARMNQTQSMLVSML 513 >UniRef50_Q47HZ3 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HZ3_DECAR Length = 452 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 152/481 (31%), Positives = 245/481 (50%), Gaps = 47/481 (9%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA+I+SLG GSGLDL S++ L + +KA L ++ ++S+ K+SA+GTL S L+ QTA Sbjct: 1 MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTA 60 Query: 61 NTALSK-------ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTT 113 AL + ++T + T+ SAT A+AG YT++VT LA + + T Sbjct: 61 AQALKANIGQTALQKFATYSTTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTV 120 Query: 114 RDDTKTAIATSDSKLTIQQ-----GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI 168 T I T+ LT G+ TI + ++N+SL+G+R++IN A G++A+I Sbjct: 121 TS-TSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNSLTGLRNSINGANMGITATI 179 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 I G+ +L +T GLDN +TL ++ + + A +A T Sbjct: 180 I-TGSAGAQLVLTGEQ-GLDNKITL---------------GGNLASQLTQTATADSAAFT 222 Query: 229 VNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 VN +A +++N S ++ +TLNL + T+ +S TA+ ++ AYN T Sbjct: 223 VNGIAATSNTNAASKVIDGVTLNLTKTGSTTLTVAAEY-SSNLSTALNSFIKAYNDANST 281 Query: 289 FSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--YKTLAQIGI 346 +++ Y ++ + GAL G+S L+ + Q +S++ T + Y+ L+ IG+ Sbjct: 282 MATMGAY-------NATTKVAGALQGNSLLQDARQQTRSLVFGTTVGGTSAYQRLSDIGV 334 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 + DG L LD KL AL D V L + + + L + TTG IK Sbjct: 335 SVGT-DGSLSLDTTKLNKALASDTVSVATL------VDKVGSAFNTTLEQVVGTTGKIKI 387 Query: 407 ATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ATD + + +L K +A +D ARY+++FT +D L+ LNSTS+YLT Q N ++ Sbjct: 388 ATDSANSMIKELQKREDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYLTTQLANLTS 447 Query: 467 S 467 S Sbjct: 448 S 448 >UniRef50_A3NFW3 Flagellar capping protein n=9 Tax=pseudomallei group RepID=A3NFW3_BURP6 Length = 441 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 169/443 (38%), Gaps = 34/443 (7%) Query: 32 PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTT-SSTTAFSATTAGNA 90 + Q + A L S LTTF+ L + T S+ S T A Sbjct: 25 QLERQANDVKRNKDALSGLGSLLTTFRDKQRELVAGGSMIQNTVTQSNDAFASVATTSGA 84 Query: 91 IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSL 150 G Y V LA A LT + KL D N S Sbjct: 85 KPGSYQFHVEQLATAHQLTIDVPSGIPAADAGSVKIKLADGSEFTVDLTAAKGEDGNVSA 144 Query: 151 SGIRDAINN---AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGY 207 + IN+ A V A++I +L +TS +TG D+ ++ + L Sbjct: 145 EELARVINSSSGASGNVHAAVI-----GGQLMLTSANTGADSKISFEIDSTSPLAGAF-- 197 Query: 208 DASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDVTTGNQTLT 263 +G AQNA++ + N IE NT+ D++E +++ V +G T+T Sbjct: 198 ------DGAVTISEAQNAKVKIGDPTNGKTIELQGNTL-DSIEGLSITFRQVGSG--TIT 248 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQT 323 + D K ++K +++AYN LID + LT+ G G D+ +R + + Sbjct: 249 VASDKEKTTESVKAFIDAYNELIDKLAELTRVGDAAKGDP-----GGPFSSDAGVRALVS 303 Query: 324 QLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKK 383 QL+S L+ +V L ++GI TD GKL LD + A K L GD + Sbjct: 304 QLRSELNKSVDGVK---LYELGIDTDKK-GKLVLDEKRFEQAFKASPDRFDKLF-GDAQT 358 Query: 384 TGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQL 443 + + G +K + V++ +L R RY ++FT+L Sbjct: 359 GLVGNLGKALDGWLNEKNGQLKTRNESVAQAEKQLLAKQQEYDRRYQDVFERYTQEFTRL 418 Query: 444 DVLMTSLNSTSSYLTQQFENNSN 466 VL +++T + F + + Sbjct: 419 QVLQLQMDNTLDQIKNLFSTSKD 441 >UniRef50_A0L3S0 Flagellar hook-associated 2 domain protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L3S0_MAGSM Length = 479 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 125/500 (25%), Positives = 226/500 (45%), Gaps = 60/500 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+ SGL + I+D L +++A LT ++ + +A S Y +L+S L ++ Sbjct: 4 GSITFGGLASGLP-ADIVDQLMQSEQARLTKMNQTSNQVSATKSTYSSLESQLLALKSKA 62 Query: 62 TALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + AD F T+T+S + + +A G ++I+V LA T ++ + T TA Sbjct: 63 EDMQSADFFRPHTATSSDEDVATISADSDAQEGNHSITVNQLATYDTFVSKGSV-TTTTA 121 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA-------KAGVSASIINVGN 173 ++D+ + G + + A +L+ I DAI N GV+AS++ G+ Sbjct: 122 GLSADTTFSFDYNGTSYSVALT---AGDTLADIADAITNTTYDNEDDGEGVTASVLYDGS 178 Query: 174 GEYRLSVTSNDTGLDNAMT-------LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQ 226 YRL + + D+G ++ + ++ D G S ++ SVA +A Sbjct: 179 N-YRLLLNARDSGTNSGASRLDLSGAADLAFDSGETITGGVTGSNDNSAWWNSVAGVDAS 237 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLI 286 LTV+N+A+ +++N +SD L I ++L +TGN T++IT D +T ++ +V+++NS+I Sbjct: 238 LTVDNIAVTSTTNEVSDVLAGIKMSLK--STGNFTISITNDEETLKTNVQSFVDSFNSVI 295 Query: 287 DTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSS--------Y 338 ++ + + GDS R L++ ++ S SS Y Sbjct: 296 SFINN----------------NKSSFGGDSLARNTINMLRAEINTPTSDSSSPYSELSTY 339 Query: 339 KTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGD------------GKKTGI 386 TL+ IGI TD S G L +D+ + A+ S + ++ G G+ Sbjct: 340 STLSSIGIKTDRSSGLLSIDSTDFSEAMSNGFSKIASIFTSKPSSADETAFETAGGNEGL 399 Query: 387 TTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + + S + S T A + G+ L+ + R++ R +Q+ L+ Sbjct: 400 SYRMESLVYSLTTDTDNPFDAKSSGLQARLDSMATSIEREESRLEKVRDRLTKQYANLEQ 459 Query: 446 LMTSLNSTSSYLTQQFENNS 465 LM+ + ST S LT S Sbjct: 460 LMSQMQSTQSALTSALAGLS 479 >UniRef50_Q2BI11 Flagellar hook-associated protein 2 n=2 Tax=Gammaproteobacteria RepID=Q2BI11_9GAMM Length = 695 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 43/422 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I SLG GSG+D +S++ L +KA ++ +Q + A++SAYGTLKS+L+ FQ A Sbjct: 6 IRSLGAGSGIDTTSLVSQLVEIEKAPQEQRLNTRQETLEAQISAYGTLKSSLSEFQNAMA 65 Query: 63 ALSKADLFSATSTTSSTTAFSA--TTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 +L+ D F+A S + + A G Y I V +AQAQ+L T + D Sbjct: 66 SLASNDTFNARSVAFPDSTVITPNSVDPGAQTGTYQIEVVDVAQAQSLATGSYADKDAAL 125 Query: 121 IATSDSK------------------------LTIQQGGDKDPITIDISAANSSLSGIRDA 156 T + ++ + I + A++ SL I D Sbjct: 126 GETGTLTVSFGTWTYDEDAAPGADADAINEPYSFVSNDERAALNISVEASD-SLDDIADK 184 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS----GDDALQSFMGYDASAS 212 IN A A V AS++ V +G+Y+L +T+ +G +NA+ +S GD S ++ + Sbjct: 185 INAADADVQASVLLV-DGQYQLLLTAP-SGKNNALRISSDDATKGDATGLSVFEFNENEH 242 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSKA 271 S + + ++A+L VN + + +N I+D ++ +LN GN T T++ D S A Sbjct: 243 SQ-VTETQQGKDAELKVNGLTVLRETNEINDVIQGFNFSLNKADPGNSLTFTVSADKSGA 301 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN 331 Q A +D V AYN T +L + ++ + G L D T +T+ ++++ ++ Sbjct: 302 QQAARDLVEAYNLFYQTSQNL----VGTSTDENNQTVKGDLSTDGTAKTLINRIRTAVTA 357 Query: 332 TVSS--SSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 V+ + L IGI T DG L ++ D + A + + L + + + T Sbjct: 358 EVTGLSGGFTALTNIGIRT-ELDGTLSINEDDFSNAFNNNYDLIENLFAQNTQSSSNQVT 416 Query: 390 IG 391 +G Sbjct: 417 VG 418 Score = 61.1 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 72/460 (15%), Positives = 155/460 (33%), Gaps = 52/460 (11%) Query: 38 SSFTAKLSAYGTLK----SALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAG 93 + LK + L N + + + ++ F+ + + Sbjct: 244 QVTETQQGKDAELKVNGLTVLRETNEINDVIQGFNFSLNKADPGNSLTFTVSADKSGA-- 301 Query: 94 KYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGI 153 A+ ++ + TS + GD A + ++ I Sbjct: 302 ------QQAARDLVEAYNLFYQTSQNLVGTSTDENNQTVKGDLS----TDGTAKTLINRI 351 Query: 154 RDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS 213 R A+ G+S + N R + + ++ + + + + L + + SS Sbjct: 352 RTAVTAEVTGLSGGFTALTNIGIRTELDGTLSINEDDFSNAFNNNYDLIENLFAQNTQSS 411 Query: 214 NGMEVSVAAQNAQLTVNN-VAIENSSN----TISDALENITLNLNDVTTGNQ-TLTITQD 267 + A TV + ++N T+S E + + VT G +T D Sbjct: 412 SNQVTVGVGSYANETVPGSYDVVVTTNPEKATVSANAETLDFSSPPVTLGADYAFKVTVD 471 Query: 268 TSKAQTAI-------KDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT 320 +K++ + ++ V A L + T A + D + + G + S Sbjct: 472 GTKSEDIVLNGSYSSEEEVRA--DLQAMINGDTNLKAANVTVDV-AYTAGQFVFTSRSYG 528 Query: 321 IQTQLKSMLSNTVSSS-----SYKTLAQIGITTDPS-DGKLEL------------DADKL 362 +++K ++ + + L+ IG+ + + GK D+ L Sbjct: 529 ASSEVKFESADFANPAKAAELGLAALSDIGVNAEGTIAGKAAFGSGNVLLPPIGSDSYGL 588 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDY 422 + ++ V A V GI + + S LS++G I+ + ++ L +T+D Sbjct: 589 NFTVGEN--AVAAGTVSTTFTRGIAGELTVLIDSLLSSSGTIENREENINSALEDVTEDR 646 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 R++ AR QF ++ ++ S ST + L + Sbjct: 647 AELDRRMEKVEARLYSQFLAMERIINSFQSTGNQLDGILD 686 >UniRef50_Q63DA1 Flagellar hook-associated protein 2 n=10 Tax=Bacillus cereus RepID=Q63DA1_BACCZ Length = 462 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 85/462 (18%), Positives = 174/462 (37%), Gaps = 30/462 (6%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S+ ++ A + TP +N+++ + Y +LKS ++F L+ Sbjct: 22 IDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 TTS + G AIAG + +++T LAQ + + +D A T++ Sbjct: 82 KVTTSQDGYINVKADGGAIAGTFNMTITQLAQRHQIASNEIKDIN----AKLPKDETLKL 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 G + +T + + + + IN+ GVSA ++ +TS G N + Sbjct: 138 GDKELKVT-----TDMTYKDLINKINDGDYGVSAY-----TLGNKIFMTSKKEGATNEIK 187 Query: 193 LSVSGDDALQSFMGYD-ASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLN 251 L + + L S S + A +A+ T+N + + SNTI L + + Sbjct: 188 LEKTPPNVLTELFYSKVESTSEMKLNTINEALDAKYTINGIDGTSPSNTIE-TLPGVKIE 246 Query: 252 LNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----YTAVDAGADS 304 L VT T T I +S + +++ K Y + D Sbjct: 247 LLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDI 306 Query: 305 QSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTA 364 + GA G + +++++ + ++++ + L GI DG +E++ + LT Sbjct: 307 FAGKGGAFQGQAIMQSVRQAMNNVVTFSQDG---NYLFSFGIQL-KQDGTMEVNDEALTK 362 Query: 365 ALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNA 424 ALK+ G+ + L G++ + ++ L K Sbjct: 363 ALKEKPDAAKQFFF---SSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKD 419 Query: 425 ASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + +++ +L+ + +L+S + + S+ Sbjct: 420 IETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 461 >UniRef50_B3PGR3 Flagellar hook-associated protein 2 n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGR3_CELJU Length = 684 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 35/416 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS+LG GSG+D +++ + L KA T ++ +++ ++S YG L+S+L ++A Sbjct: 17 ISALGTGSGIDTNALTNQLVEINKAAQTQRLTTRKTLLETQISDYGLLRSSLAKLESAAA 76 Query: 63 ALSKADLFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 AL +D F+A + + +T+ + T +A AG Y + V +AQAQ+L++ T Sbjct: 77 ALGSSDTFNAKAVSLPSTSLLSITKLNASANAGDYQLKVEQIAQAQSLSSGTFASMNAPI 136 Query: 121 IATSDSKLTIQQGGDKDPIT------------IDISAANSSLSGIRDAINNAKAGVSASI 168 LTI+ G D +T I I +N+SL G+RDAIN A GVSASI Sbjct: 137 ---GKGTLTIRLGEWNDDLTSFGVDSTKTGAEIVIDDSNNSLMGLRDAINKAGIGVSASI 193 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLT 228 ++ G G Y+L +T+ +G N + +SV+ D + + S+ + +A++ Sbjct: 194 VSDG-GSYKLLLTAK-SGAKNEIEISVAEADGSSGLSSFSFNESTQNLTQQQGGLDAKIR 251 Query: 229 VNNVAIENSSNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLID 287 VN + + SN + D +E + +L + T T+ IT+D + A+TAI+D+V AYN+ Sbjct: 252 VNGLLVSRESNQVKDVVEGLEFDLFAASTTETITINITEDKTVAETAIRDFVTAYNTFKT 311 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIG 345 L + D++ G+L D + + ++++LS++V+ + L+ +G Sbjct: 312 EVEKLVGF-------DAEKKDYGSLRTDPLAKNLVQGIRNILSSSVAGLSGGFTNLSYLG 364 Query: 346 ITTDPSDGKLEL----DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 I T DG L++ AA+ + V L V + I + Sbjct: 365 IRT-ELDGSLKIIENEGNTGFRAAIDNNFDLVRDLFVPKTSSSTAQIDITKYTANT 419 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 44/78 (56%) Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 G + T+ + + +L ++G+IK D +++ + ++ KD A R +A AR QF ++ Sbjct: 598 GFSGTMSNLINDYLKSSGVIKEREDSINRDITRVGKDEEALERRSEAYRARLMSQFQAME 657 Query: 445 VLMTSLNSTSSYLTQQFE 462 ++ SLNST S+L + Sbjct: 658 AIVRSLNSTGSFLDGILD 675 >UniRef50_Q7NTR0 Flagellar hook-associated protein n=1 Tax=Chromobacterium violaceum RepID=Q7NTR0_CHRVO Length = 451 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 105/446 (23%), Positives = 182/446 (40%), Gaps = 35/446 (7%) Query: 30 LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS-KADLFSATSTTSSTTAFSATTAG 88 T + Q S A+ A L+ AL ++++ L+ K L + + + S T G Sbjct: 26 QTQLDTQTKSAKARTDALSQLQKALQDYKSSLATLTGKKSLVAMNAAATPDGMASVTAKG 85 Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS 148 NA AG Y++ V LA +Q L T A KL GG+ + +D S ++ Sbjct: 86 NAAAGNYSVFVEQLASSQQLLMGDLAGATAKAGDKFTVKL---AGGESFDVALDGSDRDN 142 Query: 149 ----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 S S + AIN A AG +++ NG +L +++ +G N ++L +SG Sbjct: 143 DGKLSPSELALAINRASGNAGKVNAMVLNNNGVSQLVLSAGKSGEKNTISLDLSGVGDAG 202 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTV----NNVAIENSSNTISDALENITLNLNDV--- 255 G + + AQ+A + + N V ++ SNT D +E ++ +N V Sbjct: 203 LKSGL------SAPKELSKAQDAVVWLGGKTNGVRLQQGSNTF-DNIEGVSFTVNKVSKD 255 Query: 256 TTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGD 315 T +++++ S ++ +V+AYN + + L++ S D Sbjct: 256 TDPPLQISVSRGDSDTTANVQSFVDAYNKVYKAITDLSQ-------PGSNGKPGAPFADD 308 Query: 316 STLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGA 375 S++R +++QL ++L T Q+GI DG LELD+ KL LK + Sbjct: 309 SSIRGLRSQLNAILRQPFDGV---TQGQLGIKA-TRDGTLELDSKKLGETLKATPDALDR 364 Query: 376 LIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVAR 435 G + + + + G++K D + L + +A D R Sbjct: 365 FFNGASQNGALKQSADYLDKWLNGSNGMLKLRRDSEDRNQKDLGRRQDALQKTFDQTYNR 424 Query: 436 YKEQFTQLDVLMTSLNSTSSYLTQQF 461 Y QFT+L + + T L F Sbjct: 425 YLAQFTKLQSMQDQMTQTMGMLNSNF 450 >UniRef50_C6C1R6 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1R6_DESAD Length = 577 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 107/447 (23%), Positives = 188/447 (42%), Gaps = 54/447 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +I+ G+GSG D S++D L ++ + + + +SS++ K+ + L +AL QT Sbjct: 7 GNINFTGLGSGTDFQSLIDGLIKLERVHINRLESWKSSWSDKVEKFQELNTALLGLQTTL 66 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 ++ D F S T TTS + +AT + A+ + I + LA T + + Sbjct: 67 KSMDTLDEFMSKTVTTSDSGTLTATASAEALVSSHAIEIGQLATNDIHVTDSGVSSLTES 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN---NAKAGVSASIINVGNGEYR 177 I +S + T G + IT+ +A +SL G + IN +++ + A+ IN G Y Sbjct: 127 IFSSTGEFTFTYG--SETITLSNISAGTSLQGFVNLINSHVDSREKIRATTINDGT-SYH 183 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L + D G DN +T+ + + N + + A N+Q+ V+ Sbjct: 184 LQIYGLDLGADNQVTIDNT----------VGMVFTKNDFDETQNAVNSQIKVDGYPPAPG 233 Query: 233 -AIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNAYNSLIDTF 289 IE +NTISD ++ +TLNL + QT + I D + ++ +V+ N + Sbjct: 234 DWIERDTNTISDVIDGVTLNLKNTNAAGQTTAIGIVTDKEGMKENVQKFVDQNNEIRQMI 293 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ-TQLKSMLSNT--------------VS 334 LT T S S+ L G+ + + ++K ++++ + Sbjct: 294 KDLTSVTTS-----SDSAKGSILTGNYGVELLVGQRMKDIIASKGIGFSWYEELPNGDFT 348 Query: 335 SSSYKTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 Y L+Q+GI T+ G LELD +KL AL D V L + + + Sbjct: 349 GDRYSALSQLGILTNADSGGANMGLLELDTEKLNEALDADPMSVAMLFAANYE----GVS 404 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLN 416 N+ G KA V ++ Sbjct: 405 DSPNVQYVSHINGTTKAGDYNVQYEVS 431 Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%) Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + L +G ++ D + + K + DRI + E++ +LD L+ + Sbjct: 500 MVEALEDMTGESGPLEILQDNYDTIMRNIDKKIESEEDRIALKKRMLTEKYARLDALLGN 559 Query: 450 LNSTSSYLTQQFENNSN 466 S+ LT Sbjct: 560 YQGKSAQLTASVTQLMK 576 >UniRef50_D1UA93 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UA93_9DELT Length = 570 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 106/459 (23%), Positives = 190/459 (41%), Gaps = 51/459 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+GSG D + ++D L ++ +T + +SS+ +K + +L + + + +T Sbjct: 9 GSINFTGLGSGTDFNKLIDGLIDVERTRITRLETWKSSWKSKNDQFASLNTQMLSLKTTL 68 Query: 62 TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F + TSS TA +A+ A+ +I + LA T + KTA Sbjct: 69 EDFDTINEFLKKTVTSSDTARLTASAESTAMEANTSIEIGQLAANDVHITASGTSSLKTA 128 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN---AKAGVSASIINVGNGEYR 177 I +S++ T G TI+ A ++L G + +NN ++ + AS + G+ Y Sbjct: 129 ITSSNTSFTFSYAGKSY--TINDIPAGTTLEGFVNLVNNHPDSRNLIRASTVYDGS-VYH 185 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L ++ G N + +S G + A NAQ+ VN Sbjct: 186 LQLSGMGQGSKNQLVISDDGGLIFGGSDFLQS----------QEAVNAQIRVNGFPSAGG 235 Query: 233 -AIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 IE SSNTI+D LE +TLNL + G LT D S + +K +V+A N++ Sbjct: 236 GWIERSSNTINDVLEGVTLNLREAEVGKTIKLTTATDASGIKDTVKKFVDAVNTVRAQII 295 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSML-----------SNTVSSSSYK 339 +T D+G ++ L G+ + I ++K++ ++T++ Sbjct: 296 KITSVEEDDSG----KATGSLLTGNYGVDMIAQKIKNITAEMGLGFTPWDADTMTGDRLS 351 Query: 340 TLAQIGITTDPSDGK-----LELDADKLTAALKKD-ASGVGALIVGD--GKKTGITTTIG 391 L+Q+GI TD G L++D + A+K++ + L G+ T Sbjct: 352 ALSQLGIMTDAEQGSPTYGLLKIDEEVFDKAMKENDPEDIAKLFSAKNFGESQSTDFTFS 411 Query: 392 SNLTSWLSTTG----IIKAATDGVSKTLNKLTKDYNAAS 426 S + I+ + +S T+N + Sbjct: 412 SLIEGTTKPGAYDVKIVSDGSKIISATINGEEASIDGWE 450 Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 18/120 (15%) Query: 346 ITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK 405 I+ +G + + K+ + + + + G + Sbjct: 468 ISAGTHNGTVTVKTGKVGEMIDE------------------LKQLTKPYNKYTYEGGPLS 509 Query: 406 AATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 D + + + RI+ K +F++LD L+ L + Sbjct: 510 VLQDNYKDIMESIDDKIAYETTRINKMETNLKLKFSRLDALLGQYELLQGQLESSIAQLT 569 >UniRef50_A0Q000 Flagellar cap protein fliD n=1 Tax=Clostridium novyi NT RepID=A0Q000_CLONN Length = 503 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 91/515 (17%), Positives = 185/515 (35%), Gaps = 80/515 (15%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN--- 61 G+ +G+D +++ + ++ + + + K Y + + Sbjct: 12 RITGLATGMDTDTMVKKMLMREQQRIDRANGNKQYSQWKQEEYMEIIKDTRELRDDFLLI 71 Query: 62 -----TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 T L K++ +++T+ S + + A AG+Y I V +A+A T+ + ++D Sbjct: 72 SSPKETNLLKSEAYASTNAKSDNESIVEVKSLPGAKAGRYQIKVKDIARAATIEFKGSKD 131 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 D +A ++ + + + S S + I S+I+ G+ Sbjct: 132 D----LAKVKEEIEKTNPDLLNKVNV-------SFSELTGKI---------SVISKETGK 171 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA--SSNGMEVSVAAQNAQLTVNNVA 233 + ++DT D + L + G +A G + + N Sbjct: 172 K---IANDDTMRDISNVLKGKYNSDYNEIDGNEAEVYIKEPGQSEYTKVDSKYTSKNKFI 228 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT 293 I+N IS N +N G+ ++ + +D S + IK +V YN LI+ ++ Sbjct: 229 IDNMQYDISGVTTNSVIN-TKDDIGSISINVKKDVSSSVDKIKKFVEKYNKLIEKLNTKV 287 Query: 294 K-----------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 + + + G + DS ++ + ++++ S Sbjct: 288 DEKKIYSYKPLTEEQKKEMKPEEIKEWEKKAKQGIIKNDSDIQQMLSKMRQAFYGEYSKD 347 Query: 337 SYKT--------LAQIGITTDPSD---GKLELDADKLTAALKKDASGVGALIVGDG---K 382 K+ L++IGITT GKL +D KLT AL++ + V L G + Sbjct: 348 FSKSDHKTFGISLSEIGITTSKETSKRGKLVIDESKLTKALEEKSDKVYELFTKSGNSKE 407 Query: 383 KTGITTTIGSNLTSWLSTTGIIKA--------------ATDGVSKTLNKLTKDYNAASDR 428 GI + + + G + +SK + + K Sbjct: 408 SNGILNRLTEIVDKYAGGHGGKDGILVKKAGYKDSRWLLNNDLSKKIIEQEKQIKQLERI 467 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + +Y + F++L+V M +NS SS+ Q Sbjct: 468 MFTKQEQYYKMFSKLEVAMNKMNSQSSWFQAQMGG 502 >UniRef50_C0AUT9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AUT9_9ENTR Length = 309 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 122/311 (39%), Positives = 170/311 (54%), Gaps = 14/311 (4%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA I+SLGVGSG+ LS L L A++ L P+ Q S+ AK++AYG ++ L Q A Sbjct: 1 MAGIASLGVGSGMPLSQTLAQLEASENKRLEPLDKQMKSYEAKITAYGKIRGQLDKLQKA 60 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + L K D AT AF TT G A G YT+SVT LAQAQTL + D +T Sbjct: 61 SEDLKKFDKIVATKVDDEFDAFKVTTDGKASVGNYTVSVTQLAQAQTLQSTKVSDVKETL 120 Query: 121 IATSDS----KLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEY 176 T L I Q G+K+P+ I++ +S+ +RDAIN + VSA+I+ +GE Sbjct: 121 GETLGEGNKRTLVITQKGEKEPLRIELEDKQTSILELRDAINKKEGNVSATIVKAKDGEN 180 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 L +TS G D+ M ++V GD+ L + ++S+ GM+ V A+NA LT+N + IE Sbjct: 181 YLVLTSRKEGTDSKMEITVEGDNKLNE---FLTTSSAKGMKEIVEAKNADLTINGIKIER 237 Query: 237 SSNTISDALENITLNLNDVTTG-------NQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +N I DA E I LNL T + + + +D + AIK W +AYN L T+ Sbjct: 238 QTNEIKDAPEGIVLNLKKTTDSNKDNIDKPEIINVARDIEPMKKAIKAWTDAYNELNSTY 297 Query: 290 SSLTKYTAVDA 300 SLTKYT V+ Sbjct: 298 KSLTKYTQVEK 308 >UniRef50_O67805 Flagellar hook-associated protein 2 n=1 Tax=Aquifex aeolicus RepID=FLID_AQUAE Length = 441 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 85/471 (18%), Positives = 175/471 (37%), Gaps = 44/471 (9%) Query: 1 MAS-ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + GV D S+LD++ A + + + ++ KL G L+ + Sbjct: 1 MAGELYFSGVTGAYDWGSVLDNIMAVKSIPIQKLQQKKQLINQKLQILGEFSQKLSDLKN 60 Query: 60 ANTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + + + S + S + + NA ++++V + A + L + Sbjct: 61 LIENFNLESALKTKKADVSDSDVISVSVSENAPEISFSVNVLNTASKEILVYDAGFNSLD 120 Query: 119 TAIATSDSKLTI---QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 I + D T+ D TID S + +L I + IN + V ASI GN + Sbjct: 121 ETIGS-DGSFTLRYYTSPTDYVEYTIDYSLID-TLKDIVNKINETQDYVKASIYYDGN-K 177 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN-NVAI 234 Y+L + +T +N+ + + + A+NA++ + I Sbjct: 178 YKLMLA--ETSEENSTVETAPDLSTKAIHLLGTLPHQFGNNVLIQQAKNARIQIGSGDVI 235 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 E++ NT + +E ++++ G ++I+QD SK + + ++V +YN ++ SLT Sbjct: 236 ESAGNTFENVIEGVSISAKRA--GTSEVSISQDFSKIREFLNNFVKSYNEVVSQVKSLT- 292 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGK 354 N G++T+ ++ L L+ L ++G+ DG Sbjct: 293 -----------LGENAPFRGENTIMNVKYGLSDTLTP---------LMELGLIEYKEDGT 332 Query: 355 LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 + L + L + + + + + + + + ++ Sbjct: 333 ISL-SGNLESVINEKPDEFKLKMTQFLESAKAVAKVNYE---------AFEDFKEYLNDQ 382 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 ++ ++ S R+ + K QF QL+ M N L Q + S Sbjct: 383 AERIDENIRLLSQRLVQEEQILKRQFAQLEDFMNYANQIRERLKQFMVSIS 433 >UniRef50_A9VNE8 Flagellar hook-associated 2 domain protein n=20 Tax=Bacillus cereus group RepID=A9VNE8_BACWK Length = 458 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 97/463 (20%), Positives = 173/463 (37%), Gaps = 36/463 (7%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D ++D A + +P + Q+ + T + Y ++K F L+ Sbjct: 22 IDTKKLVDLELQALEMKKSPYTTQKQTLTNENKVYASMKKEFANFVQVFKDLNTFKGDEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 +T S +A AI G YTI+V +A+ +TT L ++ Sbjct: 82 KTTLSKDGFMTAQADAAAIPGTYTITVERVAERHQITTAPLTPPKTPEGTEQKFSLDLKL 141 Query: 133 GGDK----DPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLD 188 G D + + IS + + + + INN GVS + +L TS G + Sbjct: 142 GVDDVFQINGKEVKISE-DMTYKDLVNKINNGNYGVSVYTLGD-----QLFFTSTIAGKE 195 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGME----VSVAAQNAQLTVNNVAIENSSNTISDA 244 + L+ + LQ+ ++ +++G A NA+ T+N + + +N I D Sbjct: 196 GELKLTDGANGFLQNIGLVTSAKNTDGTNAIAHQVTGAVNAEYTINGIKGTSKTNKI-DT 254 Query: 245 LENITLNLNDVTTGNQTLTIT-QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 + +T+NL VTT LTI D + IK + YN+ + + D Sbjct: 255 IPGLTINLEKVTTEPIKLTIEDSDIKNSIDLIKKMKDEYNNAVKSL-------------D 301 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLT 363 S NG + G++ I + S+ + K L GI D G + LD +KL Sbjct: 302 LFSGENGVMQGNNVSFAISNAMTSIFRFSQDD---KYLFSFGIQID-KTGNMTLDEEKLK 357 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYN 423 A K++ G GI I L GII + + K + L + Sbjct: 358 IAFKENPESTKQFFFG---FNGIGHDIDKKLEGIFGDEGIIGKRSKSIEKQVTDLERKIQ 414 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + +++ +L+ + L+S + + S+ Sbjct: 415 DIDTINKKKQESIIDKYAKLESQLALLDSQLQTIKAMTKTKSD 457 >UniRef50_Q1IMG3 Flagellar hook-associated 2-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IMG3_ACIBL Length = 446 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 123/467 (26%), Positives = 213/467 (45%), Gaps = 36/467 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTAL 64 +SL G G D+ S+++ + AQ+ +QQ+ + SA ++S + TF TA+T L Sbjct: 8 TSLYSGKGFDVQSMVNQILNAQRTQEDQWKSQQTLVQNQTSALTAIQSEIGTFYTASTNL 67 Query: 65 SKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + + L + +++S T A AT A GK+ ++V LA + + Sbjct: 68 TDFNGVLGAKIASSSDTGALVATADSYATTGKHVLAVEQLATTGSAYSTAIASGDSLDSG 127 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 D + T+ + NS+LS + DAIN GV+A++ G RL++ S Sbjct: 128 CFDLTV------GSTTKTVTLGDDNSTLSDVADAINKLGMGVTAAVQTDAAGS-RLTIVS 180 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 N +G A+++S +S QNA + V+ V E++SNT+ Sbjct: 181 NTSGSAGALSIS---------------GGTSQLSFNVTKGQNAIVDVDGVPYESASNTVD 225 Query: 243 DALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 A+ +TLNL TL+++QD ++ AI DWV++YN+L+ + ++ Y Sbjct: 226 GAISGVTLNLATANPDKQVTLSVSQDATQVAQAIGDWVDSYNALVKSVNTQFSY------ 279 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDAD 360 +S ++ GAL GDS+LR +Q L + ++ Y TL IGI DG L +D+ Sbjct: 280 -NSTTNRAGALSGDSSLRLLQDSLLHLAPFSMDGNGDYGTLRSIGIDM-EDDGTLSVDST 337 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 L AL S + + G+ ++ L S T G I + +T LT Sbjct: 338 TLNDALANHFSNLTSFFQGENSFGTTLSSAAQMLES--PTVGPISLDLQTLRQTNQDLTN 395 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + + R+ +Q Q++Q++ + L S + ++Q ++ S S Sbjct: 396 EISDFETRLASQQQTLLLQYSQINAALQELPSLQNQISQMLDSTSIS 442 >UniRef50_C5VT88 Flagellar cap protein FliD n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT88_CLOBO Length = 504 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 88/529 (16%), Positives = 189/529 (35%), Gaps = 106/529 (20%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN--- 61 G+ +G+D +++ + ++ + + + + Y + + Sbjct: 13 RITGLATGMDTDAMVKKMIMREQQRIDKANGDKQYNQWRQEEYIGIIKDTRELRDDFLLI 72 Query: 62 -----TALSKADLFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 T L ++D ++AT S A + A +G+Y I V +A+A T+ + T+D Sbjct: 73 SAPKETNLMRSDAYAATKAKSDNEGLIGARSMPGAKSGRYQIKVKDIARAATIEFKGTKD 132 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASI-INVGNG 174 D ++ +++ I K + S+ +N Sbjct: 133 D---------------------------------VANVKEEIKKIKPELLNSVEVNFSEL 159 Query: 175 EYRLSVTSNDTG----LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 ++S+ S +TG D +M S + + + + Q+ + V+ Sbjct: 160 TGKISIVSKETGKKISEDTSMKEISKALKGKYSLDYREIDGNPAEVYIKEPGQSEYIKVD 219 Query: 231 NVAIENSSNTISDALENITLNLNDVTT----------GNQTLTITQDTSKAQTAIKDWVN 280 + S N ++N+ +++ TT G+ + + +D S + IK +V Sbjct: 220 --SKYTSKNKF--VIDNMEYDISGATTSNIINTKDDNGSIAINVKKDVSSSVDKIKKFVE 275 Query: 281 AYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQT 323 YN L++ ++ + + + G + D ++ + + Sbjct: 276 KYNKLVEKLNTKVDEKKIYSYKPLTEEQKKAMKPEEVKEWEKKAKQGIIKNDMNVQQMLS 335 Query: 324 QLKSMLSNTVSSSSYKT--------LAQIGITTDPSD---GKLELDADKLTAALKKDASG 372 Q++ S + K+ L++IGITT G+L +D KLT AL++ + Sbjct: 336 QMRQAFYGGYSKDTSKSDHATFGISLSEIGITTSKETSKRGQLVIDESKLTKALEEKSDK 395 Query: 373 VGALIVGD-------GKKTGITTTIGSNLTSWLSTTGIIKAAT----------DGVSKTL 415 V L G IT + + GI+ + + +SK + Sbjct: 396 VYELFTKSREGKESQGILNRITEVVDKFVGGHGGQDGILVKKSGYKDSRWLLNNDLSKKI 455 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K ++ + +Y + FT+L+V M +N+ SS+ Q Sbjct: 456 IEQEKQIKELERKMFTKQEQYYKMFTKLEVAMNKMNAQSSWFQAQMGGK 504 >UniRef50_UPI0001C43029 flagellar hook-associated protein FliD n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C43029 Length = 612 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 159/411 (38%), Gaps = 52/411 (12%) Query: 100 THLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 +A ++ + TS T + G + T I + +LS + +N Sbjct: 209 NSIASGAQVSVTFIEESETEKYTTSSIT-TFDRDGKEVKDTFVIKDS-ETLSQVFQKVNR 266 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLS--VSGDDALQSFMGY-------DAS 210 + GVS +G +S T +TG++N + + V GD + + Sbjct: 267 SNVGVSIFYDEHNDG---VSATRKETGINNKNSGNEMVFGDGFFNEVLKLKENYQVVNEE 323 Query: 211 ASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN--QTLTITQDT 268 A+NA T+N + + +NT + ++ +T+ L T GN +L ++ DT Sbjct: 324 GDPETRSNVQEAKNAVFTINGMETQRQTNTFT--IDGVTITLRGETVGNEEVSLNVSTDT 381 Query: 269 SKAQTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGA 311 K IK +V+ YN L+D + + +A + + +G Sbjct: 382 DKVFDTIKGFVDQYNELLDFVNGKLTEERYRDYKPLTDEERDAISEKEAERWDERAQSGM 441 Query: 312 LLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIGITTDPSD---GKLELDADKLTAA 365 L D ++++ ++++ + VS S Y L+ IGITT GKLE++ D+L A Sbjct: 442 LRNDRMIQSVMDRMRTDIYGMVSNNLGSDYNQLSAIGITTSRDYNDRGKLEINEDRLRQA 501 Query: 366 LKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA-----------TDGVSKT 414 +++D +GV A+ DG +G I + S I + + + Sbjct: 502 IERDPAGVAAIFNSDGPTSGEKGIIRRMRETLTSGIDSISSRAGGMGGKVANHQFTLGRE 561 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 + + R+ RY QFT ++ M N+ + L Q N Sbjct: 562 IESINTRITNFERRLQQVEDRYWRQFTAMEKAMQQANAQAESLFAQLYGNQ 612 Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 95/240 (39%), Gaps = 14/240 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SG+D I+ L A++ + + Q+ ++ AY + F+ Sbjct: 1 MRMGGLASGMDTEQIMRDLMRAERMPVDNMVKQRQVVEWQMDAYREVNRKFNEFRNKMVD 60 Query: 64 ---LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTIS-VTHLAQAQTLTTRTTRDDTKT 119 L+ A+L + T+S+++ SAT + ++ IS V LA+A++ + + Sbjct: 61 QFILTSANLSAKRVTSSNSSLVSATASASSGNVSLRISQVNELARAESNFSAGRISGEEK 120 Query: 120 AIATSDSKLTI------QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 + K + G TI S+A +S+S + +NN K A + N Sbjct: 121 VDTSKALKDQKFDQAIEWKDGAVKTETIRTSSATTSVSFAQGNVNNLKENAEADTVVKVN 180 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 G+ V G N ++V +F AS + + ++ + T +++ Sbjct: 181 GKEYEVVQ----GTPNENQVAVDYKTGTLTFANSIASGAQVSVTFIEESETEKYTTSSIT 236 >UniRef50_A6W8H4 Flagellar hook-associated 2 domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8H4_KINRD Length = 523 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 124/526 (23%), Positives = 219/526 (41%), Gaps = 63/526 (11%) Query: 1 MASISSL---GVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 M++ISS G+ SGL SSI+ SL A AT T + + SS K++AY ++ S + Sbjct: 1 MSTISSSSVDGLVSGLQTSSIISSLIAVDSATQTRLKSSVSSTQLKITAYQSVSSKMLAV 60 Query: 58 QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 Q A T L A ++ T TSS + + +T A AG + SVT +A +T+T+ Sbjct: 61 QEAATKLQAATAWTPTKATSSDKSVAVSTTEAASAGSVSFSVTGVAAGRTVTSAIFNSKA 120 Query: 118 KTAIATSDSKLTIQQGG--DKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNG 174 A S L D + I+ ++ L + A+N+ A G+ A I VG+G Sbjct: 121 ADKGAELTSALGGSPLDVVRSDGKFVTITPSSGDLEAVAKAVNDAADLGIKAVAIRVGDG 180 Query: 175 EYRLSVTSNDTGLD-NAMTLS-------VSGDDALQSFMGYDAS------------ASSN 214 +YRL +TS TG + +G D +G+DA Sbjct: 181 QYRLQITSTKTGASEGDFKIVPSVGGNASTGRDGKLREVGFDAQDFADLNVQDVTRTGGT 240 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTT---------GNQTLTIT 265 G S + + L + + +NT SD + ++ ++ + T+++ Sbjct: 241 GYTASSSKDASILLATGDPMTSPTNTFSDIIAGLSFTVSAESPFKADAPTEREKATVSVA 300 Query: 266 QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQL 325 +++ ++K V+A N+ +D + ++ A AD + G L GD LR++++Q+ Sbjct: 301 PNSAAVAASMKALVDAANAALDDVALQSR--AASVSADGSVTGGGTLRGDPALRSLRSQI 358 Query: 326 KSMLSNTVSSSSYKTL-AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIV------ 378 ++ ++++ T A G+ DGKL AA +KD +G+ L+ Sbjct: 359 IEAVTGNITATGINTSAASFGVE-STRDGKLVFKEGSFLAAYEKDPTGLKDLVAKRSTTV 417 Query: 379 -------GDGKKTGITTTIGSNLTSWLST-----------TGIIKAATDGVSKTLNKLTK 420 D K GI T + + + + G I + ++ L Sbjct: 418 VDGKTVVADDGKDGIATRLRNVVDQAIGRKEDTAIGLKALDGTITQIITNQNISIADLKN 477 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ++ + A Y++ + L+V + L S SS+L Q N + Sbjct: 478 RIADWDVKLKDKQAYYQKYYGALEVQLGKLQSQSSWLAGQLSNLGS 523 >UniRef50_C2BUJ2 Flagellar hook-associated 2 domain protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUJ2_9ACTO Length = 564 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 93/546 (17%), Positives = 203/546 (37%), Gaps = 95/546 (17%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS G+G G + I+ L ++ L + ++Q+ + +++ + T+ + + + A Sbjct: 27 GISIPGLG-GFNTQGIVKQLMMLEQVPLRKLESKQNEYKSQVQSLQTMNTKFSNIKRAAW 85 Query: 63 A-----------LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 A+++ A TSS TT A G V +A+++ T Sbjct: 86 DVYGRASKESVRFDTAEIWEAAKATSSDPMVGVTTTPGAQVGSVEFDVLQVAKSKQATLD 145 Query: 112 TTRDDTKTAIATSDS---KLTIQQGGDKDPITIDISAANSSLSGIRDAINNA-KAGVSAS 167 A + K++I G I S ++++ AIN A +G+SA+ Sbjct: 146 LDGVKNLYDAAKAKGEPPKISIMIGDKITTI----SPSSATAPAFARAINAASDSGISAT 201 Query: 168 IIN-----VGNGEYRLSVTSNDTGLD-NAMTLSVSG------------------------ 197 + G G+Y L +T +TG D + Sbjct: 202 SVRVGDNPDGTGKYVLQITGKETGADKGDFKIFAGDITQGLGLNAKTSKTDAATNSAHYV 261 Query: 198 --DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDV 255 D A + + + + + +A++ + SN I ++++ ++L++V Sbjct: 262 YEDAAALATAVRNTGVQEQALNIIHQSSDAKIRLLGQERTYGSNEI-QIMDHVKIDLSNV 320 Query: 256 TTGN---------------QTLTITQDTSKAQTAIKDWV----NAYNSLIDTFSSLTKYT 296 + T+D A ++ + +A N+L S+TK Sbjct: 321 VQKTNPDGTPLYTDALLKGVKVNATRDFDVAAGKMEKMMGALTDALNTLNRGMQSVTKEG 380 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK------TLAQIGITTDP 350 + + LG+S R ++ ++ ++S+ ++ + + +L+ G+ Sbjct: 381 IDPTTNKRFTYTAAGPLGNSEGRELKNKIMGLVSSGITVTDAEGKSQTYSLSTFGVGFSG 440 Query: 351 S-----DGK-------LELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL 398 DG+ L+ DA+K A++ + V ++V KK G + S+ Sbjct: 441 GVEKGADGQVHGSQVNLKFDAEKFKKAMESNPEKVQQVMVEFAKKVGDVASKVSDF---- 496 Query: 399 STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 T G + + + KT++ + DR+D + A+ +Q++ L+ ++ + ++L Sbjct: 497 -TEGSLTRSIESRQKTVSYYRDRISEYGDRLDRKEAQLYKQYSSLETMLARMQQQQTWLA 555 Query: 459 QQFENN 464 Q Sbjct: 556 GQLSQL 561 >UniRef50_C7I4S8 Flagellar hook-associated 2 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I4S8_THIIN Length = 653 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 130/402 (32%), Positives = 229/402 (56%), Gaps = 16/402 (3%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+S+S G+ SG+++ S++ SL+AA + +T + NQ+ S+ + LSA+G+++S+L++ Q+ Sbjct: 1 MSSVSISGLVSGINVQSLITSLSAAYQQPITLLQNQEQSYQSTLSAWGSVQSSLSSLQST 60 Query: 61 NTALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L + + S+++A S T + NA G Y++S LAQ Q++ + T T Sbjct: 61 VAGLQNITSLNNRTVNLSNSSAVSGTASANAPLGTYSLSNIVLAQTQSIYSGDFASATNT 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 A+ T ++ + G I+I + N+SL+GI AIN + +GV+A++I G G YRL+ Sbjct: 121 AVGTGTLQIQV---GSGSVTNINIDSTNNSLNGIAAAINQSGSGVNAAVIYDGTG-YRLT 176 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 +T N+TG NA T+S SG + Y A A S GM S A+NA +++N + + +++N Sbjct: 177 LTGNNTGAANAFTVSTSGATGSLGSLSYSAGA-SGGMTESQTARNASVSINGLTVTSATN 235 Query: 240 TISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 +S A+ ++LNL + + G+ TLT+ DTS +++ +V+A+N+ + T + LT YT Sbjct: 236 AVSGAIPGVSLNLLEAS-GSTTLTVANDTSAFVQSVQSFVSAFNTTMGTLNQLTAYTPGS 294 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLS----NTVSSSSYKTLAQIGITTDPSDGKL 355 S G L+G++ ++T++TQL +++S T S+Y +L +GI+ DG L Sbjct: 295 GA----SGQGGPLIGNAGIQTLRTQLLNLISGQGIGTTPGSAYTSLGAVGISL-AQDGTL 349 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSW 397 LD+ KL++AL+ + + V L G T + Sbjct: 350 ALDSGKLSSALQSNYNAVAGLFGQVGTATNANVQYVGAGNNT 391 Score = 42.3 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%) Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 + + +G + AAT G++ T+ + + + +Q A ++QF + + L S Sbjct: 569 LTQALNTQSGFVSAATSGLNNTIKGINQQITQLQNSAASQTALLQQQFNAMQTQVAQLQS 628 Query: 453 TSSYLTQQFE 462 YLT F Sbjct: 629 VGQYLTAFFN 638 >UniRef50_A1T0K4 Flagellar hook-associated 2 domain protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0K4_PSYIN Length = 447 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 102/463 (22%), Positives = 193/463 (41%), Gaps = 34/463 (7%) Query: 13 LDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS--KADL 69 +D S+ L + + T + + + K SA ++ + L+ F LS + Sbjct: 2 IDPVSMATQLASWEVYPFETSANLRLKELSGKRSALSSINTELSAFNRTLENLSGYNKTV 61 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 ++T+S +A A AG Y + V LAQ L T+ T+ + + LT Sbjct: 62 TKNSATSSDEDFLTAKAGAKAQAGNYQLFVEQLAQHHQLATQLPSGTTQDSFVPASGVLT 121 Query: 130 IQQGGDKDPITIDISA----ANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSN 183 + G+ + + ++ S + AINNA GVSAS++ + NG+ +L + + Sbjct: 122 MNINGESFTVDLAVADKVGNGELSYLDLVTAINNAPDNTGVSASLV-ISNGQIQLLFSGD 180 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSN 239 TG +N++++S S D++ +D + +SN M + +Q+A + + ++NSSN Sbjct: 181 KTGAENSVSISSSTADSV-----FDTAMNSNNMTELLKSQDAIAWLGVENSGLKLQNSSN 235 Query: 240 TISDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 + + L L +T+ I D + + V YN + T + Sbjct: 236 EMEGVFSGVDLTLKKAHQSGEAGETIIIDADKQGTKDVMDALVKQYNKIASTIDKYSA-- 293 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 +++ S GAL D T R+I+ L+ + T T+ ++G DG L Sbjct: 294 ----TGNTEGQSRGALASDPTTRSIKNSLRGVFQQTFDG---ITMGELGFEF-SRDGTLS 345 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 D D A K + + + G+G +++G IK + + + Sbjct: 346 FDGDTFEAFQKTSTADIEEIFRGEGMFLSQLQGKLDIYND--NSSGTIKNQIESIDIQKS 403 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 ++ + + + ARY +Q+T L L T +N+ S+ +Q Sbjct: 404 RVDNKLESLDRKYENFYARYLKQYTSLSTLQTQMNNISTMFSQ 446 >UniRef50_C4V4Y4 Flagellar hook-associated protein 2 n=2 Tax=Selenomonas RepID=C4V4Y4_9FIRM Length = 547 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 97/548 (17%), Positives = 193/548 (35%), Gaps = 89/548 (16%) Query: 1 MASIS-SLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA G+ GSG+D+ S++ +++ I ++ + A+ + S + F+ Sbjct: 1 MAGARGIYGLSGSGIDVESLVKVGMMSEQKKYDRIYKKEVETEWRKEAFADVYSEVNAFR 60 Query: 59 TANTALSKADLFSATSTTSS-TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR--- 114 + + + + + TSS + A +AT NA +T+ VT A L T + + Sbjct: 61 SNMSDMRLSSKTKPMTATSSLSDAVTATANANAGVMSHTVEVTQAASNAYLMTTSGQKVA 120 Query: 115 -------------------DDTKTAIATSDSKLTIQQGGDKDPITIDISAA-----NSSL 150 + ++D+ L+ + I +A N +L Sbjct: 121 RTNTAAPTSVALKDIAFAGGTMPAGMTSTDTALSFKLSNGTGTTEIKFTAEEVFTKNLTL 180 Query: 151 SGIRDAINNA----------KAGVSA---------SIINVGNGEYRLSVTSNDTGLDNA- 190 + + INNA ++A SI+N +G S DTG +A Sbjct: 181 NDLATRINNARFIGSDGKKSALNITASYDAVSDAFSIVNTQSGTNNKVSLSMDTGASSAT 240 Query: 191 ------MTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 L + + S ++ A NA + V+ N + Sbjct: 241 YTTALLNNLKLGQVSGGTISAPLSFTISGTTAKLEAAGTNASVKVDGRTYTNLQDN-KLQ 299 Query: 245 LENITLNLNDVTT--GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF------------- 289 + +T T +TI QD K +K +V YN L+D Sbjct: 300 VNGVTYTFKKATPVGTPAQVTIAQDQEKLVENVKKFVEDYNKLLDDLHGRYNNNKYPDYG 359 Query: 290 ----SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQ 343 + ++ + G L + +R+I + ++ ++N V S Y LA Sbjct: 360 VLTKEQEAGMSREQVDKWNERAKAGLLYRNDYVRSIISDMRDAVTNRVGSAPGRYNNLAS 419 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT---------TIGSNL 394 IGIT+ G L+LD KL A+ + V + + + +G + Sbjct: 420 IGITSKDQSGHLKLDETKLRNAIAAEPDAVKQIFSHTDEDDNYSDNGVATRLSERLGKRM 479 Query: 395 TSWLSTTGIIKAATDG--VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 S S G+ +D + K + + K + + + + +++ ++ ++ L++ Sbjct: 480 ESLKSHAGMTADKSDRSELGKLIQEYEKQMSDFKKLMSSFENQLYKKYNAMEEAISRLST 539 Query: 453 TSSYLTQQ 460 + ++Q Sbjct: 540 QFGFFSRQ 547 >UniRef50_Q5WDF2 Flagellar hook-associated protein FliD n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF2_BACSK Length = 579 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 100/445 (22%), Positives = 162/445 (36%), Gaps = 60/445 (13%) Query: 50 LKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT 109 + + L+K ++F + T ++ + + GK T+ Sbjct: 165 VNGKAYAVADSPDDLAKGEVFI------NDTGEVTFSSADKVTGKVTVEYIQ-------- 210 Query: 110 TRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASII 169 D T S S TI G+K + ++ ++S + + NA A V+A Sbjct: 211 ----ADSEATERYLSSSVATIAANGEKVESSFFFKESD-TISSVVTKLQNAGAKVNAFF- 264 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 L VT +TG F G + A +NAQ TV Sbjct: 265 --DENSGSLVVTRKETGHFGE------AGQNELMFSGALFEQGLGLNDNVEAGKNAQFTV 316 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 N + E +SNT + L +T+ L D +T TL+ D IK +V YN+L+D Sbjct: 317 NGIETERTSNTFT--LSGMTITLKDTSTQAVTLSAATDVDSIVETIKSFVEEYNALLDHM 374 Query: 290 SSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 + + T +A + + +G L D L+T T ++ L Sbjct: 375 NGKLNEKYYRDYDPLTDEERDQLTESEAKRWEEKAQSGLLRRDPLLQTALTNMRQTLYEP 434 Query: 333 VS-SSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 V ++ L+QIGI+T GKLE+D +KL AA+++DA V + G Sbjct: 435 VDTGGAFTHLSQIGISTTKNYKDGGKLEIDENKLRAAIEEDADSVYTIFAGTDNNGSGIG 494 Query: 389 TIGSNLTSWL---------STTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ 439 S + G + + K +LT R++ + ARY Q Sbjct: 495 QTLRANLSDSMSSLSMRAGGSEGYYEEHQFTLGKQTKELTDRIANFERRLEQKEARYWRQ 554 Query: 440 FTQLDVLMTSLNSTSSYLTQQFENN 464 FT ++ M N+ S L N Sbjct: 555 FTAMEKAMQLANAQSESLYNLLYGN 579 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 100/261 (38%), Gaps = 24/261 (9%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ SGLD+ ++ L A++ + + Q++ K AY + + F+ + Sbjct: 1 MRLTGLASGLDIDQMMKDLMRAERIPVNKLEKQRTEIGWKTDAYREINLKMRAFRDSIFD 60 Query: 64 --LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRD-DTKT 119 L +++ T ++S++ +AT + + +T+ V LA + T ++ K+ Sbjct: 61 NVLRASNMKKRTVSSSNSDIATATASSSVGNAAFTLNEVRQLATSATAKSKNLSGLTEKS 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSG---IRDA----INNAKAGVSASIINVG 172 + G T+ +S LS +N V+ S ++ Sbjct: 121 QLKELGINDGEWVEGKLKRETVQVSDGKVQLSEAPQFAGESMLIVNGKAYAVADSPDDLA 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV 232 GE + NDTG + ++ D+ A+ + SV A + N Sbjct: 181 KGEVFI----NDTGEVTFSSADKVTGKVTVEYIQADSEATERYLSSSV----ATIAANGE 232 Query: 233 AIENS-----SNTISDALENI 248 +E+S S+TIS + + Sbjct: 233 KVESSFFFKESDTISSVVTKL 253 >UniRef50_Q73AL3 Flagellar hook-associated FliD, putative n=33 Tax=Bacillus cereus group RepID=Q73AL3_BACC1 Length = 469 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 92/471 (19%), Positives = 185/471 (39%), Gaps = 41/471 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S+ ++ A TP +N+++S + Y +LKS ++F L+ Sbjct: 22 IDTSNFVELEMNALDMRKTPYTNEKNSLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 TTS + G AIAG + +++T LAQ + + D + A +S T++ Sbjct: 82 KVTTSQDGYINVKADGGAIAGTFNMTITKLAQRHQIAS----DQIENIDAKINSDETLKL 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 GG + +T ++ + + + IN+ GVSA ++ +TS G D + Sbjct: 138 GGKELKVT-----SDMTYKDLINKINDGDYGVSAY-----TLGNKIFMTSKKEGEDGVIN 187 Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNL 252 + Q A+ + +AQNA+ T+N + ++S+NT+ AL + + L Sbjct: 188 FEGNKSSLFQKIG--LANDDGVALHEINSAQNAEYTINGIKGDSSTNTVE-ALPGVKIEL 244 Query: 253 NDVTT------------GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----Y 295 VT G +T + T I+ +S + S++ K Y Sbjct: 245 LKVTEQTVEEKPVEKPDGEKTEVDPKTTEAKAKGIELKFTVSDSNVTDASNVIKKMVADY 304 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 + D + GA G + +++++ + S+++ + L GI DG + Sbjct: 305 NKAVSTVDIFAGKGGAFQGQTIMQSVRQAMNSVVTFSQDG---NYLFSFGIQL-KQDGTM 360 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 E++ + LT ALK+ G+ + L GI+ + + Sbjct: 361 EVNDEALTKALKEKPDAAKQFFF---SSNGLGKMMEEPLDKLFGDKGIVGERVKNIDSRV 417 Query: 416 NKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + L K + + +++ +L+ + +L+S + + S+ Sbjct: 418 SDLDKKIKDIEAQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 468 >UniRef50_A1HT19 Flagellar hook-associated 2 domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT19_9FIRM Length = 603 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 101/412 (24%), Positives = 170/412 (41%), Gaps = 56/412 (13%) Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDI 143 AT +G AG VT A ++T K + + L + G IT++ Sbjct: 215 ATVSGVTTAG-----VTSTASTGFVSTDVLSS--KISGLPATFNLKLTNGAKTANITLN- 266 Query: 144 SAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQS 203 ++ +L + D IN A G +AS N G G++ L TS TL ++G D+ Sbjct: 267 --SSDTLQQVIDKINAAGVGAAASFDN-GTGKFTLQATSG--------TLDLTGSDSAAL 315 Query: 204 FMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLT 263 + D + +V Q+A T++ V + +SNT + + +T NL V G ++ Sbjct: 316 QLFIDKLKLPANL-PTVHGQDAIFTLDGVNLTQASNTFT--ISGVTYNLKAV--GTASVA 370 Query: 264 ITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQS 306 ++ D KA +K +++AYNS++D ++ K + + Sbjct: 371 VSPDNDKAIANVKAFIDAYNSVLDKINAELKEERYPDYLPLTDEQRKEMSESQVTEWEKL 430 Query: 307 SSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDP--SDGKLELDADKL 362 + +G L D L+ +++ ++ V Y +L+ IGITT GKL LD KL Sbjct: 431 AKSGMLRRDPILQDTLFKMRYDIATPVQGVTGQYTSLSSIGITTGDYSEGGKLYLDETKL 490 Query: 363 TAALKKDASGVGALIVGDGKKTGI-------TTTIGSNLTSWLSTTGIIKA----ATDGV 411 AAL+ D V L +G T+ L G A T + Sbjct: 491 KAALEADPDIVNKLFGSNGATREQDGVAVRLYDTLKGALDKIKGEAGTSAAVDGDTTSVL 550 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 ++ + K A R+ RY +QF L+V ++ +N + +L QQF + Sbjct: 551 AQRIKDYQKQMEAMDRRLKDIEDRYYKQFDALEVALSKMNQQTGWLLQQFSS 602 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 20/289 (6%) Query: 3 SISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TA 60 + + G+ GSGLD+ ++ L A++A+ + +++ K + Y T+ S + +F+ T Sbjct: 2 GMRTYGLSGSGLDVDQLVKDLMKARRASYDKLYQKKTQLEWKKADYATMYSTIKSFRETT 61 Query: 61 NTALSKADLFSATSTTSSTTAF-SATTAGNAIAGKYTISVTHLAQAQTL------TTRTT 113 + S A +AT +A +TI+VT LA TL TT + Sbjct: 62 VFNYKLQGTLAPKKVASGNEAVVTATANADAANVNHTITVTQLAGGVTLGSNGPITTGAS 121 Query: 114 RDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGN 173 +D + I+ TI + S+ AIN+A + A+ + Sbjct: 122 KDTLAAQFGLTGGSFDIKITNGTISKTITVDP-TKSIYDFVSAINSAGVNIKANYDATLD 180 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 R + + TG + + S S G D + + A +T Sbjct: 181 ---RFFLYTTGTGATVGIDFTGS------STAGIDFLQNKLKIATVSGVTTAGVTSTAST 231 Query: 234 IENSSNTISDALENITLNLN-DVTTGNQTLTITQDTSKAQTAIKDWVNA 281 S++ +S + + N +T G +T IT ++S + D +NA Sbjct: 232 GFVSTDVLSSKISGLPATFNLKLTNGAKTANITLNSSDTLQQVIDKINA 280 >UniRef50_B2UJT2 Flagellar hook-associated 2 domain protein n=8 Tax=Ralstonia RepID=B2UJT2_RALPJ Length = 680 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 142/427 (33%), Positives = 228/427 (53%), Gaps = 32/427 (7%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 IS G+G+ +D+++++ SL + LT + NQQSS+ +LSA GTLKSAL+TFQTA + Sbjct: 16 ISIPGIGTSIDVNTLVSSLMKVESQPLTLLQNQQSSYQTQLSAVGTLKSALSTFQTALSN 75 Query: 64 LSKADLFSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L+ A +SA + T+ SA+ A AG Y ++V+ LAQ+Q L + T + Sbjct: 76 LTTASNYSAMKASGYDTSVLSASVTSAAAAGSYAVNVSQLAQSQVLAAQGQTSTTTAIGS 135 Query: 123 TSDSKL--------------------TIQQGGDKDPITIDISAANSSLSGIRDAINNAKA 162 + + + T Q G +I I+++N++L+GIRDAIN+A Sbjct: 136 GTSTTVSFSFGTVSGGTFSNGKYSGATFTQNGSLAGGSITINSSNNTLAGIRDAINSANL 195 Query: 163 GVSASIINVGNG-EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVA 221 GVSASI+N G+G YRL +TS G ++ M +SVSGD LQS + D A + M Sbjct: 196 GVSASIVNDGSGNPYRLVLTSTAGGSNSEMKISVSGDSTLQSLLAQDP-AGTQNMTEVTT 254 Query: 222 AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNA 281 QNA T+N +A+++ +NT+S+ + + L TG+ T+T+ D + A+ +VN Sbjct: 255 GQNALATINGIAVQSPTNTLSNVVTGTSFTLAK--TGSTTVTVANDPTATTNAVNSFVNG 312 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+L ++LT S S++NG L GD + +T+ Q+ +L + + +Y++L Sbjct: 313 YNALRTQLNTLTNIDT------SNSANNGPLAGDVSTKTLINQITDVLGQAIGTGTYQSL 366 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 +G+T + DG L +D KL+AA+ S V L G G T ++ S + + T Sbjct: 367 GSVGVTMNA-DGTLSVDNTKLSAAIAASPSQVTGLFAGTGTATDSLVSVPSFTDTTQAGT 425 Query: 402 GIIKAAT 408 + Sbjct: 426 YAVSVTQ 432 Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 67/435 (15%), Positives = 143/435 (32%), Gaps = 5/435 (1%) Query: 34 SNQQSSFTAKLSAYGTLKS-ALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIA 92 + + T +A T+ A+ + + + F+ T S+T + A Sbjct: 246 TQNMTEVTTGQNALATINGIAVQSPTNTLSNVVTGTSFTLAKTGSTTVTVANDPTATTNA 305 Query: 93 GKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSG 152 ++ + + Q T ++ + ++ + + + Sbjct: 306 VNSFVNGYNALRTQLNTLTNIDTSNSANNGPLAGDVSTKTLINQITDVLGQAIGTGTYQS 365 Query: 153 IRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASAS 212 + A + S+ N + S TGL + + D+L S + + Sbjct: 366 LGSVGVTMNADGTLSVDNTKLSAAIAASPSQVTGL---FAGTGTATDSLVSVPSFTDTTQ 422 Query: 213 SNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQ 272 + VSV Q +++ A N++ T + + + N++ + + S Sbjct: 423 AGTYAVSVTQLATQGSLSGSAAANTTIT-AGVNDTLAFNISGMAVNVTVPAGSYSASSLA 481 Query: 273 TAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT 332 I+ +NA +L + + S G++ S L Sbjct: 482 AQIQSQINASTTLQTAKVTASVSANASGVMTITDSQFGSVSAVSVSGNGAASLMGSSPTA 541 Query: 333 VSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS 392 V+ + T + + A G + G + + Sbjct: 542 VAGLDVQGTINGVAATSSGQNLYGATGTAVDGLTVQVAGGAVGSRGTVTVQRGYAAQLNT 601 Query: 393 NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 T+ LS++G+++ TD ++ +L+ L + R+D + A Y QF L L+ S+ + Sbjct: 602 VTTNLLSSSGMVQNETDAINNSLSSLASQISVMQTRLDNKQALYYAQFNALSALVASMTN 661 Query: 453 TSSYLTQQFENNSNS 467 TS+YLT Q N Sbjct: 662 TSTYLTTQLAAIQNQ 676 >UniRef50_C6QNN0 Flagellar hook-associated 2 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN0_9BACI Length = 418 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 89/427 (20%), Positives = 161/427 (37%), Gaps = 66/427 (15%) Query: 91 IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSL 150 A + V + + A L+ + +TK I + +Q G I S + ++ Sbjct: 2 AATGVSGEVGNASSATKLSEKGLAAETKITI------VALQANGTYKEEEITFSP-DDTI 54 Query: 151 SGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTL--------SVSGDDALQ 202 + + +N + ++A + ++ +++ TG + + + S +GDD Sbjct: 55 ADVVKKLNQSSLNINAIF---DDSSKKMGISTRATGTLDTIDVDKAEVYVKSATGDDIFA 111 Query: 203 SFMGYDASASSNGMEVSVA----AQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG 258 + G+ NG + QNA+ T+N + +E SNT + + I + VT+ Sbjct: 112 TIFGFGTGNDQNGNSGVTSLANGGQNAKFTLNGLEMERQSNTFT--INGIEYTVKAVTST 169 Query: 259 NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAG 301 T+T + D I+++VN YN LI T + + T Sbjct: 170 PVTVTSSTDVDGMIAKIEEFVNKYNELIGTLNDKIREKRYRDYPPLTDEQKKEMTEKQIE 229 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS---SSYKTLAQIGITTDPS---DGKL 355 + + +G L GDS + +Q++ L + V + TL++ GITT GKL Sbjct: 230 LWEEKAKSGLLRGDSIISNGLSQMRRDLYSRVDGIGENVIDTLSEFGITTTSEISSGGKL 289 Query: 356 ELDADKLTAALKKDASGVGALIVGDGKKTGIT-----------------TTIGSNLTSWL 398 +D DKL AL+ D V + +G T + TI +T+ Sbjct: 290 VIDYDKLRKALESDPDKVVKTLTQNGAITKDSATGQVTSDTRGIVQRLRDTIKGIITNIE 349 Query: 399 STTG--IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSY 456 G + L + + R+ +RY QFT ++ + N S + Sbjct: 350 KKAGKPTYTENQYSIGLQLRDVENQISDFQRRLQDIESRYWRQFTAMEQAIQRANQQSMF 409 Query: 457 LTQQFEN 463 L QF Sbjct: 410 LMGQFGG 416 >UniRef50_C4V0A4 Flagellar hook-associated protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4V0A4_YERRO Length = 445 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 100/446 (22%), Positives = 197/446 (44%), Gaps = 44/446 (9%) Query: 29 TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD--LFSATSTTSSTTAFSATT 86 L + Q S F ++ + ++S L F+TA + ++K D + + TS + T Sbjct: 21 RLNRLKGQHSQFKSEQDSLNKIQSGLNDFRTALSGINKKDEGILKLKTNTSDEKIATVTA 80 Query: 87 AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAA 146 A+ G Y + VT LA + L +D A++++ ++ G I ++ Sbjct: 81 NHKAVKGSYDLFVTQLASSHQLA---LKDLNDAAVSSATGAFELEIDGKTINID---TSG 134 Query: 147 NSSLSGIRDAINNAKAG--------VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 SS++ + +AIN K V+AS+I G GE L+++SN +G NA+T+ Sbjct: 135 LSSVAELAEAINKNKDNQGSDKKELVTASLIRTG-GEVVLTISSNKSGAANAITIPN--- 190 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNTISDALENITLNLND 254 G + AA +A++++ + I + SNT+ ++ +T+NL Sbjct: 191 -------GAATIFTGASEVELSAAADAKVSLGNENSGIEITHPSNTLDTVVDGVTINLVK 243 Query: 255 VTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGA 311 V T + + DTS Q +K +V+A+NS+ + + T D G D+ + + Sbjct: 244 VQKTGDTPLHIDVEMDTSATQEQVKKFVDAFNSVKKLVTPV--RTKADEGKDNTGKPSYS 301 Query: 312 LLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDAS 371 + + + + L S++ +V+ K + GI T+ DG LE+D+ K A+K D Sbjct: 302 RNSNEGISALSSALNSLVRQSVNG---KRILDYGIKTN-RDGGLEIDSKKFEQAIKADPK 357 Query: 372 GVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 G+ L+ GD + + S + ++ + G+IK T+ + + + + + + Sbjct: 358 GLQDLLNGDAG---LLNKLDSAIEPYINKSNGLIKGRTESLERRTTSIRDQLDRLEKQYE 414 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSY 456 ++ Y +FT + + + Sbjct: 415 QKIIFYTVKFTTIKNTADKMKANMKS 440 >UniRef50_Q9X0K7 Flagellar hook-associated protein 2 n=7 Tax=Thermotogaceae RepID=FLID_THEMA Length = 608 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 89/450 (19%), Positives = 177/450 (39%), Gaps = 48/450 (10%) Query: 45 SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIA------------ 92 L SAL++ ++S S TS GN Sbjct: 178 DIVSKLNSALSS-AGITGSVSYDTSTGKISITSDKNFSLVDITGNFTKVFHLDEASLNYS 236 Query: 93 -GKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLS 151 G Y+ + + + T IAT SK I + + ID+ N +LS Sbjct: 237 GGNYSF------TSTASVSGLSTAKTLQQIATYTSKTIISGKVKINGVEIDVD-QNDTLS 289 Query: 152 GIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA 211 + + IN+++AGV+AS N R+ + S +G + A+TL + L S +G + + Sbjct: 290 SLIEKINDSEAGVTASYDYHAN---RVVIISKTSGPE-AITLEDTYGTGLFSLLGIENHS 345 Query: 212 SSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKA 271 G + + Q + N + + +N + +T +++ +T+ T+ + DT Sbjct: 346 LYVGQKAHL--QISMDGTNWADVYSDTNDVE--YNGVTFHISGMTSETITVDVRVDTDAI 401 Query: 272 QTAIKDWVNAYNSLIDTFSSLTKYTA----VDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 IK++V+ +N +D + + + + G L GD L I ++L+ Sbjct: 402 VEKIKEFVDKWNETMDYLNEKLTEESITDKDEEEMTEEEKMKGVLKGDDLLEEIFSRLRG 461 Query: 328 MLSNTVSSSSYKTLAQIGITT--------DPSDGKLELDADKLTAALKKDASGVGALIVG 379 ++ L ++GI+T + G LE+D +KL +++D + V G Sbjct: 462 FITYKAEG-DINYLWELGISTGDIGTGYENMMKGHLEVDEEKLKQIVEEDPNKVWEFFGG 520 Query: 380 DGKKTGITTTIGSNLTSWLSTTGIIK---AATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 + G T + L + G I + + + L + +R+ + Sbjct: 521 ---ENGFATQLDDYLWELVKFNGRIDQVAGISGRIEREQRFLATQIASWIERLSKREQEL 577 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 +F+ ++ +++ L S S+++Q + +SN Sbjct: 578 WRKFSVMEEVISQLQSQGSWISQALQGSSN 607 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 122/328 (37%), Gaps = 23/328 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 + G SGLD SI++++ A+ L ++ + + AY +K+ L F+ Sbjct: 18 LGGFQVGGAVSGLDTQSIINAILEAESQPLQNLTEKYEKYELMQEAYTEVKTKLREFRDL 77 Query: 61 NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLT----------T 110 + + SS++ SA + A+ G Y + + A TL + Sbjct: 78 VYSFKLQSTVVQKTAVSSSSLLSAEASSVAVTGVYHVKIVQTATYTTLAGASEVVPPPDS 137 Query: 111 RTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASI 168 T + + + + + + + + + + ++ I +N+A AG++ S+ Sbjct: 138 TKTFGELDYMYTPQEGTVRLYNNETGNYVEVQVLSTD-TIDDIVSKLNSALSSAGITGSV 196 Query: 169 INVGNGEYRLSVTSNDTGLDNAMTLSVSGDD-ALQSFMGYDASASSNGMEVSVAAQNAQL 227 ++S+TS+ +T + + ++ + Y S SV+ + Sbjct: 197 SYD-TSTGKISITSDKNFSLVDITGNFTKVFHLDEASLNYSGGNYSFTSTASVSGLSTAK 255 Query: 228 TVNNVAIENSSNTISD--ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSL 285 T+ +A S IS + + ++++ T + + D+ TA +Y+ Sbjct: 256 TLQQIATYTSKTIISGKVKINGVEIDVDQNDTLSSLIEKINDSEAGVTA------SYDYH 309 Query: 286 IDTFSSLTKYTAVDAGADSQSSSNGALL 313 + ++K + +A + G Sbjct: 310 ANRVVIISKTSGPEAITLEDTYGTGLFS 337 >UniRef50_C3K0V2 Putative flagellar hook associated protein (FliD) n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K0V2_PSEFS Length = 467 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 120/485 (24%), Positives = 230/485 (47%), Gaps = 38/485 (7%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQT 59 MA + G+GS +D +I+ SL A+K T I+ T LS+ G +++AL F+ Sbjct: 1 MAGSTVSGIGSNIDTQAIVKSLVDAEKVPKQTQINTASQKATTTLSSIGKIQAALDAFRG 60 Query: 60 ANTALSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 A ++ + F+ T ++S + T + A G + + V+ LAQA L+T+ T Sbjct: 61 ALDNMTASSSFTGLTGSSSDEKVATMTASNTASNGSFRLIVSQLAQASKLSTKNFAGGTS 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 T + +D T+ ++I A ++L +RD+IN +G+SA+I NG Sbjct: 121 TVVNATDKPTTLTISQSGKNYDVNI-PAGATLQQVRDSINTQFGTSGLSANIQTDSNGS- 178 Query: 177 RLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 RL +TS G + +TLS + S G V ++AQ +++ VA + Sbjct: 179 RLILTSTTMGTGSDLTLSGN-------------SGLDVGSTVVDHPKDAQYSIDGVASVS 225 Query: 237 SSNTISDALENITLNLNDVTTGNQT-------------LTITQDTSKAQTAIKDWVNAYN 283 +N I AL + + L V+ +T++ + + ++ +K ++++YN Sbjct: 226 KTNNIEGALSGVNIKLLSVSATKTVGDTSDTAERTATLITVSTNNTALKSGVKGFIDSYN 285 Query: 284 SLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQ 343 +LI ++ TK T G S++ AL GDST+R++Q +++ + + ++K+LAQ Sbjct: 286 ALITAMNAETKITKNLDG----STTAAALTGDSTMRSLQASIRNEFNTISGTGTFKSLAQ 341 Query: 344 IGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGI 403 G++T + G L +D K AA K +A+ + ++ G + + ++TG+ Sbjct: 342 FGVSTSSTTGLLTMDDKKWDAAAKTNAADINSMFTGKNGMLARMKSATDDFAK--ASTGV 399 Query: 404 IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + +S +L L+K + ++R+D +++ +D L+ L S+ + Sbjct: 400 LATRSTSLSDSLKDLSKQQDTLNERMDLLTKSLSDKYNAMDTLVAQLRQQSTSVMTTLNA 459 Query: 464 NSNSK 468 +N K Sbjct: 460 LNNPK 464 >UniRef50_A5P6J4 Flagellar hook-associated 2-like protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6J4_9SPHN Length = 472 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 104/478 (21%), Positives = 204/478 (42%), Gaps = 30/478 (6%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + LG+GSG+D++ + L AQ A ++ Q + ++S G+++S+L+ F A Sbjct: 10 TQLGIGSGVDMTGLASQLAEAQFAGRNERLTIQSETLERRISLAGSIRSSLSAFAAALGD 69 Query: 64 -LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L DL + T+++ A ++ G+ G Y++ VT LA Q L+ + + T A Sbjct: 70 RLRTGDLAPLPNITNASVAAVSSPLGSIGKGTYSLKVTKLASNQVLSGPIYSNPSDTVGA 129 Query: 123 TS-------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 + + + + P+TI+I AA ++L+ + AIN AG++A + NG Sbjct: 130 GTLTFRFGNTDTTSFTEDVTRSPLTIEI-AAGATLADVASAINGKNAGLNAYVAQTANGA 188 Query: 176 YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 +L V D G+ N + D + + + + +A+ ++ ++ Sbjct: 189 -QLVVKGAD-GVKNGFIIEAVEDASNPGLANLAWQPGGDASRLIKTSADAEFLLDGISRV 246 Query: 236 NSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 + SN+I+ ++L+L G T++ + + ++D A N + + T Sbjct: 247 SPSNSITGIAPGLSLSLLGTNPGTPATISFNSPNAALSSVMQDITGALNEIASQLRTATD 306 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTV----SSSSYKTLAQIGITTDP 350 +G L D+ R + L ++ S + + S TL+++G+ Sbjct: 307 ------------PKSGDLARDTGARALSRSLSALGSAEIMPNAPTGSPSTLSELGLAIQ- 353 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 DG D KLTAAL +D +GV A+ T + S S G + + Sbjct: 354 RDGSFTFDNAKLTAALARDPAGVAAMFTTGINGVYSTIDRMARSNSIASDPGSLAGSIAR 413 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 K+T+D +++ + A +F + D + + ST S+L Q + ++ + Sbjct: 414 YQSQSQKITEDLQELAEKQEILRANMVARFAKADSRVAASQSTLSFLQSQIDVWNSQR 471 >UniRef50_C5RFT3 Flagellar hook-associated 2 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFT3_CLOCL Length = 538 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 95/537 (17%), Positives = 195/537 (36%), Gaps = 84/537 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + G+ +G+D SI+ SL +A + + +Q K AY ++ + + ++ Sbjct: 10 MRMTGLTTGMDTESIVKSLMKPYQAKIDNVYKEQQLNAWKQEAYRSVMTKMQNIKSKYFD 69 Query: 64 LSKADLF-------------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 +K D + + + S+ + + T G A G Y + + A + Sbjct: 70 ATKPDNYILNSNSLAEKKVTATAAVAGSSPSVTVTAGGTANDGTYIVDIKTAATKAEIKG 129 Query: 111 RTTRDDTKTAIA------TSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKAG 163 TKT+ T+ ++ I G T +S AN ++S + + +N AG Sbjct: 130 TALAAGTKTSTKLSTLGMTTSDEIQITYGVGASAKTATVSIGANDTISTLINKVNTETAG 189 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 G S ++ G + + + SG M +SS G + ++ Sbjct: 190 NVKLEYYEYAG---FSFSTTAYGASSGVQIDNSGVGDTLLKMNLTTGSSSVGTDGVMSIT 246 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYN 283 +V+ + +SN +S ++ +++ +N TG +T+ ++T + IK +V+ YN Sbjct: 247 YPNGSVSGNQVL-TSNKVS--VDGMSMVVNG--TGITNVTVEKNTDETLKKIKSFVDDYN 301 Query: 284 SLIDTF-----------------SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLK 326 +++D + + + G L DS L + + L+ Sbjct: 302 TMLDDIYGQIYSKRNYSYKPLTDEEKEAMSDEEVTKWEAKAKQGILAKDSNLENLASTLR 361 Query: 327 SMLSNTVSSSSYKTLAQIGITTD---PSDGKLELDADKLTAALKKDASGVGALIVGDGKK 383 S L + + L+Q GI+T GK+++D L L++D V + G Sbjct: 362 SELFTRPLNGTGGNLSQFGISTSSDISKRGKIQIDEAVLKQKLQEDPDAVLTALAGPSTT 421 Query: 384 TGITT-------------------TIGSNLTSWLSTT-----------------GIIKAA 407 + + TT G + Sbjct: 422 YPSYNPDATSTDRDTRLNEMGAFGRVSHIFEDYARTTRNSKGAKGILVEKAGIKGDLSEI 481 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 ++ SK + ++ + + ++Y +F L+ +M+ LN+ S+L QQ + Sbjct: 482 SNSYSKLMLDQQTKIDSLNKKFTDMESKYYAKFGNLETMMSKLNAQQSWLQQQLGSM 538 >UniRef50_C2ED65 Flagellar hook-associated protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED65_9LACO Length = 491 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 118/490 (24%), Positives = 202/490 (41%), Gaps = 58/490 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 +S S +G +G+ S +D L + + T I N+ K A+ + + L+ + Sbjct: 17 SSSSYMGQYTGI-TSDTIDQLLQSDELRKTVIQNKIDKINTKSQAWTDISTRLSNLTSKL 75 Query: 62 TALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + + T+S T + + +++ G Y + V LA A +T T Sbjct: 76 DVLQDEATYQTKKVTSSDDTIATISGTSDSMEGSYDLVVKQLATASKITGGVVSKADGTT 135 Query: 121 IATS------DSKLTIQQG---GDKDPITIDIS-AANSSLSGIRDAINNA---------- 160 ++ KLTI G G +T++I A SL I +AINNA Sbjct: 136 KISTKDALGYSGKLTITNGATDGSDAALTVEIDVKATDSLKDIANAINNAKDPSDSTGTK 195 Query: 161 KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 AG+ A+I+N +L V+S + G D + G + + Sbjct: 196 GAGLKATIVNN-----QLVVSSEEMG------------DRTLTIGGDLKDSLGFANSQTT 238 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWV 279 QNA+ T++ + +E +SN+ +D ++ +TLN TL +T DT K +A+KD+V Sbjct: 239 RGQNAKFTLDGIEMERNSNSPTDVVDGVTLNFKKADASKTITLGLTNDTDKELSAVKDFV 298 Query: 280 NAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK 339 + YNS++ S + + GAL GDSTL ++Q++L+S + S + Sbjct: 299 SQYNSVMSFLSEKMDVGDPSKSDN----TTGALAGDSTLISLQSKLQSTVLGGKSVNGVS 354 Query: 340 TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALI------------VGDGKKTGIT 387 + +G++ D +G L LD K A L K+ + V G G Sbjct: 355 A-STLGLSVD-RNGTLSLDEAKFKAQLAKNPNAVKDFFFKDTSTKYATEKTGTGYTADFK 412 Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 + ++ + G+I + K +++I + ARY FT LD + Sbjct: 413 AVLDRYTSTKSGSEGVISLRKSSYQSEIKDYNKQIERITEQIATKRARYVTMFTNLDTAI 472 Query: 448 TSLNSTSSYL 457 +L S SY Sbjct: 473 GNLQSQFSYF 482 >UniRef50_C9XJ10 Flagellar cap protein n=6 Tax=Clostridium difficile RepID=C9XJ10_CLODC Length = 507 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 94/519 (18%), Positives = 181/519 (34%), Gaps = 76/519 (14%) Query: 1 MASIS---SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 M+SIS G+ D+ I+++ K + +Q K Y + Sbjct: 1 MSSISPIRVTGLSGNFDMEGIIEASMIRDKEKVDKAKQEQQIVKWKQEIYRNVIQESKDL 60 Query: 58 QTANTALSKADLF-------SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 +++ + S T+S + A + A Y +V+ +A+ T Sbjct: 61 YDKYLSVNSPNSIVSEKAYSSTRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKFTI 120 Query: 111 RTTRDDT----KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGV 164 + + A+ S LTI + I IS +++ S I IN+ A + Sbjct: 121 KLNSSEPIVRQFPPNASGASSLTI------GDVNIPISEQDTT-STIVSKINSLCADNDI 173 Query: 165 SASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYD-----ASASSNGMEVS 219 AS L ++ TG + + L V G+D L + D A+ +S S Sbjct: 174 KASY---SEMTGELIISRKQTGSSSDINLKVIGNDNLAQQIANDNGITFANDASGNKVAS 230 Query: 220 VAAQNAQLTVNN-----VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 V +N + V + I N+ ++NI N+N + G LT DT +A Sbjct: 231 VYGKNLEADVTDEHGRVTHISKEQNSF--NIDNIDYNVN--SKGTAKLTSVTDTEEAVKN 286 Query: 275 IKDWVNAYNSLIDTF-----------------SSLTKYTAVDAGADSQSSSNGALLGDST 317 ++ +V+ YN L+D + T + + + G L D Sbjct: 287 MQAFVDDYNKLMDKVYGLVTTKKPKDYPPLTDAQKEDMTTEEIEKWEKKAKEGILRNDDE 346 Query: 318 LRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVG 374 LR ++S + L ++GI G++ +AD + AL D+ V Sbjct: 347 LRGFVEDIQSAFFG--DGKNIIALRKLGINESENYNKKGQISFNADTFSKALIDDSDKVY 404 Query: 375 ALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA--------------TDGVSKTLNKLTK 420 + G +G + + SK + + + Sbjct: 405 KTLAGYSSNYDDKGMFEKLKDIVYEYSGSSTSKLPKKAGIEKTASASENVYSKQIAEQER 464 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + + ++++ + R +++ L+ L+ +S +Y +Q Sbjct: 465 NISRLVEKMNDKEKRLYAKYSALESLLNQYSSQMNYFSQ 503 >UniRef50_C6NWM3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWM3_9GAMM Length = 644 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 133/418 (31%), Positives = 229/418 (54%), Gaps = 20/418 (4%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 S+S G+ SG+D+ S++ +L+AA + +T + Q+ S+ LSA+GTL+S+L++ Q+A Sbjct: 2 SVSLSGLVSGIDVQSLISNLSAAYQQPITLLQKQEQSYQTSLSAWGTLQSSLSSLQSALG 61 Query: 63 ALSKADLFSATSTT-SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 AL + S + S+ +A+ A G Y++S LAQ+Q++ + + + TA+ Sbjct: 62 ALQNLGSSNNRSVSLSNAGVATASVTNGAQLGSYSLSNIVLAQSQSIYSSSFASASNTAV 121 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVT 181 T ++ + G I I+ N +L+GI AIN A GV+A++IN G+G YRL++T Sbjct: 122 GTGTLQIQVGSGAVS---NIVINGGNDTLNGIASAINQANLGVNAAVINDGSG-YRLTLT 177 Query: 182 SNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI 241 TG++NA T++VSG + + Y A S GM +S AAQNA L++N +A+ +SSNT+ Sbjct: 178 GTGTGVNNAFTVAVSGASGSLAELSYSPGA-SGGMTLSQAAQNASLSINGLAVTSSSNTV 236 Query: 242 SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAG 301 S A+ +TLNL T+G+ TL ++ S +A++ + +A+N + T + LT Y Sbjct: 237 SGAIPGVTLNLQ--TSGSTTLQVSASNSAFVSAVQSFTSAFNKTMGTINQLTAY------ 288 Query: 302 ADSQSSSNGALLGDSTLRTIQTQLKSMLSNT----VSSSSYKTLAQIGITTDPSDGKLEL 357 ++Q+ S G LLG + ++ ++TQL +++S + S+Y +L +G+ S G + L Sbjct: 289 -NAQTGSGGPLLGSAAVQGLRTQLLNLISGPGLGVSAGSAYNSLGAVGLGL-TSSGTITL 346 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTL 415 + L+ AL D V L G + S S + T + + T+ Sbjct: 347 NTGTLSTALNSDYQTVLGLFSQAGSTSSSNVQFVSASGSVQAGTYAVAVSQLATQATV 404 >UniRef50_C9PEC9 Flagellar hook-associated protein FliD n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEC9_VIBFU Length = 440 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 95/456 (20%), Positives = 196/456 (42%), Gaps = 39/456 (8%) Query: 13 LDLSSILDSLTAAQKAT-LTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKA--DL 69 +D +S+ + + T +++ F + S + S++++ + +K Sbjct: 3 IDAASMASQMAIYDVSPAETRYNSRLKIFQNQSSMLSKITSSMSSLDSVIYKFTKPGASF 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 T++ SS + TT+GNA + + V LA + + T+ + + + + Sbjct: 63 VQNTTSLSSEDHVNVTTSGNASSVNMDLYVEQLASSHQVVVNTSAMNVNDEFSPATGSIE 122 Query: 130 IQQGGDKDPITIDISAANS----SLSGIRDAINNAKAG-VSASIINVGNGEYRLSVTSND 184 +Q GG+ I + + +N S N G V+A+++ GN E ++ TSN+ Sbjct: 123 VQHGGETITIQLADAESNGDGTVSYQEFISHFNRVMDGRVTATMVRSGN-EMKMLFTSNE 181 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNT 240 TG DN +S S D L S+ +A + + V + NSSNT Sbjct: 182 TGQDNQFQISASDDSGLSDAF------STANDNPIKTGTDAIVWLGDYGSGVQLTNSSNT 235 Query: 241 ISDALENITLNLNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 + + + + L +T+ D T +K++V AYN ++ + TK + Sbjct: 236 FENIVNGVDVELKKAHEMGGIATNITVGPDADATMTLLKEFVTAYNDMMSVIAEATKSSG 295 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL 357 +SS G DS+ ++++ QLK ++ ++ + +L+++G++ D GKLEL Sbjct: 296 -------ESSERGVFSTDSSFKSLEQQLKGLMRDSYNGV---SLSEVGLSLD-KSGKLEL 344 Query: 358 DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLN 416 D DK A + + + +G + TT+ ++ + G + + + Sbjct: 345 DEDKFREA--SKSVDMEQVFRAEGG---LFTTLQKSVNDYTDFADGSLTRKKETIELQQK 399 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNS 452 ++ + + D+ +RY Q+T+L+ +M S++S Sbjct: 400 RINEALDKLEDKYQVIYSRYLAQYTRLNSIMASMDS 435 >UniRef50_B7IQA2 Flagellar hook-associated protein n=10 Tax=Bacillus cereus group RepID=B7IQA2_BACC2 Length = 439 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 93/456 (20%), Positives = 170/456 (37%), Gaps = 41/456 (8%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D S +++ A TP +N++ T + Y +LK ++ LS Sbjct: 22 IDTSKLVELELQALDMKKTPYNNEKEQLTQEKLLYASLKKEFSSLTQTMKDLSSFKGNEK 81 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQ 132 T S S T +AIAG + I V LAQ +++ D D + TI+ Sbjct: 82 KVTLSQEGYISVTADASAIAGTFNIEVKELAQRHQISSEKIADLDAKI----DMEETIKI 137 Query: 133 GGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMT 192 IT +++ + + IN+ GVSA + ++ +S+ G A+ Sbjct: 138 NNQDIVIT-----KDTTYRQLINKINSGNYGVSAY-----SLGNKIFFSSSKMGEKGAIK 187 Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNL 252 L SG Q + + A+N+ +N V SNTI L + + L Sbjct: 188 LEDSG----QFLEKMGFVKTDGTLNEIEKAKNSTYVINGVEEHGESNTIE-TLPGVKIQL 242 Query: 253 NDVTTG-NQTLTIT-QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNG 310 + G + T+ + +A IK V+ YN + T + NG Sbjct: 243 DKSEVGKSVKFTVEDSNVKEANELIKKMVSNYNQAVSTV-------------ELFGGKNG 289 Query: 311 ALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDA 370 AL G + + I+ + ++++ + L GI +G L++D KLT ALK++ Sbjct: 290 ALQGQNIMGDIRRIMNNIVTYSQDG---NYLFSYGIQV-TKEGTLQVDEAKLTNALKENP 345 Query: 371 SGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 G+ I + GII + + KL + N + Sbjct: 346 DAAKQFFF---SADGLGKQIDTQFNKIFGDVGIIGERIKIIDDRVGKLDRKINDIDIQNK 402 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + +++ +L+ + +L+S + + S+ Sbjct: 403 QKQDDIVKKYQKLESTLAALDSQLKTIKAMTKQKSD 438 >UniRef50_Q9PHW6 Flagellar hook-associated protein 2 n=12 Tax=Campylobacter RepID=FLID_CAMJE Length = 642 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 108/446 (24%), Positives = 183/446 (41%), Gaps = 58/446 (13%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 S+SSLG GSG+ +D L A++ A + P + + T K +K+ L +FQTA Sbjct: 4 GSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENTTKQKDLTEIKTKLLSFQTA 63 Query: 61 NTALSKADLFSATSTT---SSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 ++L+ A +F+ S S T I+VT LAQ ++ +D Sbjct: 64 VSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMNINVTQLAQKDVYQSKGLANDG 123 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGN--G 174 A + + + T+ + N++ + D IN A G + A I+N G Sbjct: 124 GFVNAQLNGTADLTFFSNGKEYTVTVD-KNTTYRDLADKINEASGGEIVAKIVNTGEKGT 182 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQS--------------FMGYDASASSNGME--- 217 YRL++TS +TG D+A++ D+ G D SAS + + Sbjct: 183 PYRLTLTSKETGEDSAISFYAGKKDSNGKYQKDINAEKIFDDLGWGLDVSASIDPDKDKK 242 Query: 218 ---------VSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDT 268 AQNA+ T++ + + SSNT++D +TL LN TG + QD Sbjct: 243 GYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNK--TGEINFDVQQDF 300 Query: 269 SKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSM 328 A++D V+AYN L+ ++ T Y +S++ + G L G S + +I++ + + Sbjct: 301 EGVTKAMQDLVDAYNDLVTNLNAATDY-------NSETGTKGTLQGISEVNSIRSSILAD 353 Query: 329 LSNTVSSSSYK--------------TLAQIGITTDPSDGKLELDADKLTAALKKDASGVG 374 L ++ ++ G++ + G L D+ K +K+D Sbjct: 354 LFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLN-DAGTLSFDSSKFEQKVKEDPDSTE 412 Query: 375 ALIVGDGKKTGITTTIGSNLTSWLST 400 + K I T T LS Sbjct: 413 SFFSNITKYEDINHTGEVIKTGSLSK 438 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 126/399 (31%), Gaps = 44/399 (11%) Query: 101 HLAQAQTLTTRT---TRDDTKTAIATSDSKLTIQQGGD-KDPITIDISAANSSLSGIRDA 156 AQ T R LT+ + G+ + D ++ + DA Sbjct: 254 QTAQNAEFTLDGIKMFRSSNTVTDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDA 313 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVS-GDDALQSFMGYDASASSNG 215 N+ ++A+ + ++ ++ D + DA+ + Sbjct: 314 YNDLVTNLNAATDYNSETGTKGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVN 373 Query: 216 MEVSVAAQNAQLTVNNV-AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTA 274 +V ++ Q+ L++N+ + S+ + + + + + +T +D + Sbjct: 374 TKVMLSMQDFGLSLNDAGTLSFDSSKFE---QKVKEDPDSTESFFSNITKYEDINHTGEV 430 Query: 275 IK-----------------------DWVNAYNSL---IDTFSSLTKYTAVDAGADSQSSS 308 IK D+ +N+ + S T + + + Sbjct: 431 IKTGSLSKYLNSNGGNTNGLEFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQN 490 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKK 368 + + ++ +++S N V+ SD ++ DA+ L Sbjct: 491 LANHINSKGIEGLKVKVESYNQNNVTGFRLNFSGD-----GSSDFSIKGDANILKELGLS 545 Query: 369 DASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDR 428 D + I G G I + + + L G I + ++ + L ++ Sbjct: 546 DVNITSKPIEGKG----IFSKLKATLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAM 601 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 ID + Q+ Q + ++ LN + +T +NS Sbjct: 602 IDTRYDTMANQWLQYESILNKLNQQLNTVTNMINAANNS 640 >UniRef50_Q31FN2 Flagellar filament cap protein FliD/FlaH n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FN2_THICR Length = 781 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 120/404 (29%), Positives = 186/404 (46%), Gaps = 28/404 (6%) Query: 11 SGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 S D+ ++ +L A+ A + T +L A+ L++ L F + T LS L Sbjct: 16 STFDIGNMSKALATAEVAGPKAILERNVEKVTTELDAFKYLQTNLEAFNSYVTDLSSPTL 75 Query: 70 FSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 FS +T+SS T S T +A Y I LAQA T+ ++T L Sbjct: 76 FSQKNTSSSNETLVSVTATNSAALASYQIESRQLAQAHTMVANKGFTSPSDTLSTG--TL 133 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLD 188 TI GG IT+D A+N++L G++ INN GV+ASIIN G G Y++ TS ++G Sbjct: 134 TIDVGGQVSNITVD--ASNNTLEGLQKVINNGDYGVTASIINNG-GSYQMMFTSKESGAA 190 Query: 189 NAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENI 248 T+S D +NG + AQ+A + +N V + NS+NT ++ + Sbjct: 191 GEATISGIAD------------FDTNGFTTTSQAQDAVMVLNGVTVTNSTNTFDQVIDGV 238 Query: 249 TLNLNDVTTGNQ-TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSS 307 T LN + G T+++ QD+ + I +V+ YN L L KY D + +S Sbjct: 239 TFQLNSASIGTTSTVSVGQDSQSVKDTITSFVDVYNQLDTILDELGKYDTSDLTEEELAS 298 Query: 308 SN----GALLGDSTLRTIQTQLKSMLSNTVS---SSSYKTLAQIGITTDPSDGKLELDAD 360 G L G+S LR+++ Q++ +S +S SY++LA IGI DG LE+D+ Sbjct: 299 EEYKYYGDLAGNSLLRSVKYQIRESMSGAISQLAGGSYQSLADIGINF-TRDGALEVDSA 357 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGII 404 KL AL D S + + G + S + + Sbjct: 358 KLDTALSTDMSALSTMFAKGGTSDDALVNVLSGSDKTQTGDYAL 401 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 58/424 (13%), Positives = 124/424 (29%), Gaps = 41/424 (9%) Query: 62 TALSKADLFSATSTTSSTTAFSA-TTAGNAIAGKYTISVTHLAQAQTLTTRT-------- 112 T +S A TS + + + G Y +++T LA T+T Sbjct: 365 TDMSALSTMFAKGGTSDDALVNVLSGSDKTQTGDYALNITQLADRATVTGGAVTGLTTDE 424 Query: 113 ------TRDDTKTAIATSDSKLTIQQGGDKDPITIDISAAN-SSLSGIRDAINNA----- 160 D T + + + G + I + A ++ + AI Sbjct: 425 QVAGDRISDLTSALTIDASASFDLNVNGTVNTINLASVAQTYATKDEVATAIQGQIDAAF 484 Query: 161 KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV 220 AGV A + + L S G+ A+ + + + Sbjct: 485 GAGVVAISYDSAQSRFEL-------NAAAGQGTVDIASTTGMSNQGFGAATYAGQQLLDL 537 Query: 221 AAQNAQLTVNNVAIENSSNTISD---ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKD 277 A +A V S+ T++ ++ + L + N + + Sbjct: 538 GATDATFNVKIDESTTSAVTVTAGRYTMDELALTMASTINNNADVKASGAEVSVTHDGSA 597 Query: 278 WVNAYNSLIDTFS-SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 + + LT + A + + D TL T L + + Sbjct: 598 FTVTSTRFGGFSNVELTGFANFAAAGFTTDVLDAGQNVDGTLTTASGSLNIGAYASATDG 657 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTS 396 ++ + + + ++ + G G + + + + Sbjct: 658 RQVKISDYAM--------ISGNEAEVRGLEFEVIGGTTGARGTISYSEGYASQLETTIND 709 Query: 397 WLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 TG++ ++ L++ + R + +A+Y+ QF+ L L+ S T + Sbjct: 710 LFKADTGLLSTRMSNLNDRLDRYDEKTKDIDTRYEKLLAKYQMQFSMLQSLINSSEQTRN 769 Query: 456 YLTQ 459 LT Sbjct: 770 MLTA 773 >UniRef50_B2V9J0 Flagellar hook-associated 2 domain protein n=3 Tax=Sulfurihydrogenibium RepID=B2V9J0_SULSY Length = 434 Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 106/475 (22%), Positives = 191/475 (40%), Gaps = 54/475 (11%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ++ G+ +G D++SIL + A + + + QQ + K + ++S L Q++ Sbjct: 3 GELNVTGLVNGFDMNSILQQIQAIKSQQILMLQGQQQQISDKKTVISNIQSILKNLQSSI 62 Query: 62 TALSKADLFSATST-TSSTTAFSATTA--GNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 +S +A S S+ +A+ N G Y I+++ LA Q + + D Sbjct: 63 NNISDPSTVNAKSVNVSNPNVLTASITDPTNVSEGIYNINISQLATNQVYASNNSFSDKN 122 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA----KAGVSASIINVGNG 174 ++ + LTI G+ I D SL + D INN ASIINVG Sbjct: 123 ASLGLNPGTLTISMNGNSYNINYD---NTDSLQSLADKINNTASANSGNFRASIINVGTS 179 Query: 175 E---YRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 Y+L ++ TG DN+ T+S +G+ + S G+ AQN TVN Sbjct: 180 SNPKYKLVISGTKTGADNSFTISDTGN-----------AVSVLGLTNIQNAQNGAATVNG 228 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 + +++ +NT ++ + ++ TG+ L I +D ++ VN YN L+DT + Sbjct: 229 LQVQSDTNTFTN-IPGLSFT--AFQTGSTVLQIQKDNKPITDTLQAIVNYYNQLVDTVN- 284 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS 351 ++ G L G+ L I + S L ++ I D + Sbjct: 285 ------------KETGKGGKLSGEYGLNQIVNGIFSQLQPLFTADI--------INFDRT 324 Query: 352 DGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGV 411 G + L+ KL AL + + + I + + L + GI+ Sbjct: 325 SGHISLNTSKLNDALTNNGADLQN------TLNNIKNNLTTYLNPYTQFNGILDQYNKSY 378 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + + + R+ ++ K QF Q+ +L +N S+ + F N S+ Sbjct: 379 DSQIQNIQNLIDLQTKRVQIEIETLKNQFIQMQMLQAQMNDISARIQATFGNQSS 433 >UniRef50_B0PA02 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA02_9FIRM Length = 733 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 86/432 (19%), Positives = 168/432 (38%), Gaps = 69/432 (15%) Query: 89 NAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS--------------------DSKL 128 + G ++ V+ + + + + T + + D K Sbjct: 312 DPATGAFSFDVSAMKGSSIMLSGTNATEDLLGVLNGESNRIGLGGSVKMYFGNAFVDGKA 371 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLD 188 ++ G IT + ++ + +N + AGV+ + + R ++T+N TG Sbjct: 372 QLEINGKTITIT-----EDMTVGDMIRKVNASGAGVTMTYQAEAD---RFTLTANSTGAA 423 Query: 189 NAMTLSVSG-DDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALEN 247 + L + +A+ D S G A +NA+ TV+ V IE SSNT Sbjct: 424 FDIKLGNTALSEAIFGKAPADPSKPDAGGYTFTAGKNAKATVDGVEIERSSNTFE--FNG 481 Query: 248 ITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK------------- 294 + + L T +T+T++++T + +K ++ YN+LID +SL + Sbjct: 482 LNITLTGTTDKTETITVSRNTDQIVDGVKSFIEDYNALIDKLNSLIEEDTDYREYAPLTD 541 Query: 295 -----YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 + + + + G L DST+ T Q++S + + S + + +GI T Sbjct: 542 AQKKEMSEKEIELWEEKAKKGLLRNDSTISTFLQQMRSAIYQRPAGSPF-AIYDLGIETG 600 Query: 350 P--SDGKLELD---ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG-- 402 + GKL +D L AA++ + GV AL G+ I +N S +G Sbjct: 601 EWETKGKLVMDADGEATLRAAIESNPDGVVALFTGEQGLASQLDKILTNTASTSFVSGNS 660 Query: 403 ------------IIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + + T+ ++ + + + RY +F ++ ++ + Sbjct: 661 RGSLVEIAGYAETASDKDNTLYNTIQQIDQKIKDLKAAYEQEKTRYWNKFNAMESMIQQM 720 Query: 451 NSTSSYLTQQFE 462 +S SS+L QQF Sbjct: 721 SSQSSWLAQQFG 732 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 103/274 (37%), Gaps = 37/274 (13%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA------LSK 66 +D S++++L + +A + + + K Y + + + TFQ Sbjct: 1 MDTESMVEALLSGTQAKIDKQNALRQQTVWKQEIYREIITQMNTFQNKYFGSSSSTNFLS 60 Query: 67 ADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTR---------DDT 117 + F+A + SS++AF + + A G +I+V+ LA+A L++ + D Sbjct: 61 STFFNAMNAVSSSSAFKVSASSGATVGSTSIAVSQLAEAAKLSSASGTRKLSGEINLDAI 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITI---------DISAANSSLSGIRDAINNAKA-----G 163 + +A +T + ++ I D + A A Sbjct: 121 QKQVAGQARDVTFVVNNKTVKVDFKDLFVNDDGTFKTPPATQQQIADRLTEAFAAQGFDK 180 Query: 164 VSASIINVGNGEYRLSVTS----NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 + A + N G + +TS +D G+ +++T+S S A +G +A+AS+ + Sbjct: 181 IKAEVGNDGE----IVITSSTWDDDNGVGDSITVSSSSSAAGLKILGLNANASAEVYTGA 236 Query: 220 VAAQNAQLTVNNVAIENSSNTISDALENITLNLN 253 + +L + + ++ LN Sbjct: 237 DGKKGMKLESSQPIATGNYFSVDVTFNGSKTTLN 270 >UniRef50_Q48GD5 Flagellar hook-associated protein FliD n=8 Tax=Pseudomonas syringae group RepID=Q48GD5_PSE14 Length = 492 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 131/493 (26%), Positives = 228/493 (46%), Gaps = 39/493 (7%) Query: 5 SSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 S+ G+GSGL +++I++ L A+KA I Q ++ TA LS L SAL FQ Sbjct: 7 STTGLGSGLAITAIVEGLVGAEKAPKQNQIDKQTAATTASLSGVSQLTSALAAFQKTLDT 66 Query: 64 LSKADL--FSATSTTS-STTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 L + F + TS + AT A+ G Y I +T LA + T +A Sbjct: 67 LGSSTTPAFQGFAATSANEAVVKATAGNTAVNGTYAIGITQLATPSKVATAALNSTQASA 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 I L I Q G + ID ++ +L +RD IN++ G++A+IIN NG RL Sbjct: 127 I--PSGTLKITQNGTDYSVVIDKTS---TLQEVRDKINSSLQGKGITANIINDDNGA-RL 180 Query: 179 SVTSNDTGLDNAMTLSVSGD------------DALQSFMGYDASASSNGMEVSVAAQNAQ 226 +S TG + +++ + + + A ++ A++A Sbjct: 181 VFSSTTTGKGSDISVVGASGQEALNIDGTKLMSDTSTGTDANGKAIPGAGAITATAKDAA 240 Query: 227 LTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDT--SKAQTAIKDWVNAYNS 284 TV+ +++ + +NT+S A+ +T +L T T T+T T + +++ +V++YN+ Sbjct: 241 FTVDGLSLTSKTNTVSTAISGLTFDLVAPTAAGATTTVTVATNTDGLKASLQSFVDSYNT 300 Query: 285 LIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQI 344 L +SLTK + D G + AL GD+T R + ++ L++ SS+ L+Q+ Sbjct: 301 LATLVTSLTKGSISDKGVY----TAAALTGDATPRALLATIRDQLASASSSAGLSALSQL 356 Query: 345 GITTDPSDGKLELDADKLTAALKKD--ASGVGALIVGDGKKTGITT-------TIGSNLT 395 GI T S+G L LD TAAL S + + G G T + L Sbjct: 357 GIKTQQSNGTLSLDTATFTAALNDKKLGSQIQTMFTGTGATNADGTVDGGLVSRMTKALL 416 Query: 396 SWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSS 455 + + G++ + T ++K ++ D +A RI + A +++ +D+++ L +T++ Sbjct: 417 PYTKSDGVLASKTSSLNKIQTRIASDQDALDRRITSLTASLTKKYNAMDLVVGQLKATAT 476 Query: 456 YLTQQFENNSNSK 468 +T FE + K Sbjct: 477 SITSIFEAMNAQK 489 >UniRef50_B8DS30 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DS30_DESVM Length = 579 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 112/457 (24%), Positives = 193/457 (42%), Gaps = 59/457 (12%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 SI+ G+ +G D I+++ A ++ + + Q+S+ AKL+A L++ +TT Sbjct: 7 GSITFTGLNTGTDWDEIIEAQMAVEEYRYNAMLSAQTSYEAKLAAVQDLETQMTTLYQTL 66 Query: 62 TALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 S F A + TSS T + T +A +T+ V LA+ ++ T T Sbjct: 67 QDYSSVSDFLAKAATSSDETCVTVTADNDAKESSHTVVVNQLARNDIWSSDDGYAATGTV 126 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA---KAGVSASIINVGNGEYR 177 I +D + G + + ++LS IN A V ASIIN GN Y Sbjct: 127 ITDTDQTFSFTYGDMTYTLDV---PGGTTLSEFASLINGASGNNDDVRASIINEGN-AYH 182 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV----- 232 L + D G DN +T+ +G DA+ + + AQNAQ+ V+ Sbjct: 183 LQIRGMDLGADNTVTIEDTGFDAMG----------PDAFTNTQKAQNAQIKVDGFPAAAD 232 Query: 233 -AIENSSNTISDALENITLNLNDVTTGN-QTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 +E S+NTI D ++ +TL L T + + + D A++ V + N+++ Sbjct: 233 EWMERSANTIDDVIDGVTLQLKKATGSDGVNINVALDADAMVGAVETVVGSINTVLQLLM 292 Query: 291 SLTK--------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSN----- 331 L + + A+ S+S L + ++ +Q+ LKS+LS Sbjct: 293 DLRSQGTVSSSVSTSTASDSDDEDDAEDDSASASVLASNYGVKLVQSTLKSILSTKGLGF 352 Query: 332 ------TVSSSSYKTLAQIGITTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD 380 + + + +L+ IGI+TD + G L +D D L AA+KKD + V L+ D Sbjct: 353 SYYDSASETGDLFTSLSTIGISTDADEDSETFGLLVIDYDDLEAAIKKDPNAVAELLSAD 412 Query: 381 GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNK 417 +T + + + +G +A VS + Sbjct: 413 ----VAGSTDSGDFSFGSAISGTTRAGQYDVSYRIEN 445 Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 59/398 (14%), Positives = 127/398 (31%), Gaps = 22/398 (5%) Query: 79 TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDP 138 + G G + T AQ + + S + + G Sbjct: 193 DNTVTIEDTGFDAMGPDAFTNTQKAQNAQIKVDGFPAAADEWMERSANTIDDVIDGVTLQ 252 Query: 139 ITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD 198 + + +++ DA +A G +++ N +L + G S S Sbjct: 253 LKKATGSDGVNINVALDA--DAMVGAVETVVGSINTVLQLLMDLRSQGTV-----SSSVS 305 Query: 199 DALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTG 258 + S + A + SV A N + + +++ +S + + TG Sbjct: 306 TSTASDSDDEDDAEDDSASASVLASNYGVKLVQSTLKS---ILSTKGLGFSYYDSASETG 362 Query: 259 N-----QTLTITQDTSKAQTAIKDWVNAYNSLIDTFS-SLTKYTAVDAGADSQSSSNGAL 312 + T+ I+ D + V Y+ L + + + S+ +G Sbjct: 363 DLFTSLSTIGISTDADEDSETFGLLVIDYDDLEAAIKKDPNAVAELLSADVAGSTDSGDF 422 Query: 313 LGDSTLRTIQTQLKSMLSNTVSSSS----YKTLAQIGITTDPSDGKLELDADKLTAALKK 368 S + + +S + + Y I+ G D L AL Sbjct: 423 SFGSAISGTTRAGQYDVSYRIENGEIVEAYINGNAASISGWTITGASGKDEKGL--ALTV 480 Query: 369 DASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDR 428 + + G+ K G L S+ G ++ D L++ + + +R Sbjct: 481 NNTSDGSYTGSVSLKQGKIGQFIDTLEDMTSSKGTLQIMEDSFQDILDQYAQSISREEER 540 Query: 429 IDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + +R + +++ L+ L+TS ++ SS + + S+ Sbjct: 541 LGLVESRLRSRYSGLETLLTSYDNLSSTIDSLLASLSS 578 >UniRef50_B6BGD3 Flagellar hook-associated protein 2, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGD3_9PROT Length = 458 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 103/477 (21%), Positives = 202/477 (42%), Gaps = 33/477 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 ISS+GVGS + +LD L AA + +TPI+ ++ K A + +++T + Sbjct: 2 GISSVGVGSSILTQDVLDQLRAADEGGQITPITLSLANEGDKKDALALIDASMTNLIDSI 61 Query: 62 TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 + L+ TT + ++ + T A N+ +T++VT LA Q + + + + Sbjct: 62 NEIKSQSLYDERKTTLTGSSVAVTAAANSDIQDFTLNVTTLATKQIEQSGSFGSEDD-LV 120 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINVGNGEYRLSV 180 + ++ + G I A ++L +++ IN+ A V A+++ +G ++RL + Sbjct: 121 SGGAGQINLNIDGQDFAIDYT---ATTTLKELKNLINDVAGDKVDATVVQIGASDFRLFI 177 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT 240 +S DTG +T++ ++ + NA T N AI +SN Sbjct: 178 SSADTGTTQNITITDVTGTIDSKL------STDFDAVAIQSGVNAAFTFNGQAISRTSNQ 231 Query: 241 ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 + D + + + L TG+ +++ QD + +V YN+ I +TK + Sbjct: 232 VDDLITGLKITLQA--TGSTDVSVQQDRENILSKFDSFVEKYNATITELDKMTKPST--- 286 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 S G G+ST++ ++ ++ M +L G D G + LD Sbjct: 287 ----DSDERGIFSGESTIKNMKRAIEDM--IGSIGGGVGSLLDYGFDVD-KSGTMTLDKT 339 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTT---------IGSNLTSWLSTTGIIKAATDGV 411 L + +++S V G G TT + + + + D + Sbjct: 340 VLETKMDENSSNVEIFFAGGDFDNGDGTTTTVDGAFTEFSAKVEEYTKYNATLDQFKDSI 399 Query: 412 SKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 S+T++ L A++R+DA+ K+QF D++++ +NS SS Q + ++ Sbjct: 400 SETISSLEDRKAKATERLDAKYEILKKQFIAYDLMISRINSASSMFVQMANAQTAAQ 456 >UniRef50_A8AKF6 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=A8AKF6_CITK8 Length = 442 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 126/469 (26%), Positives = 214/469 (45%), Gaps = 49/469 (10%) Query: 11 SGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADL 69 S D +++ L L T + +Q S+ A+ A +L++AL+ F++A T L+ + Sbjct: 2 SDFDPTTLATQLAGYDILALQTSLKSQTSTLEAQKKALSSLRTALSDFRSAITGLNSSST 61 Query: 70 --FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 T+T + + T + +A G Y+++VT LA AQ + AI + Sbjct: 62 SVLKNTATMNQEGIATITASASARKGTYSLNVTQLASAQQ---KGFDGLDDEAIKNASGT 118 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNAK--------------AGVSASIINVGN 173 L I G+ I +D SL+ DAINNA GV+AS++ + + Sbjct: 119 LKINLNGESLEIEMDDL---DSLADFADAINNADFPSASDTATSDDGQNGVTASLMRI-D 174 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 G+ L ++S+ +G + L SG Q NG V A ++A+ TV + + Sbjct: 175 GKVTLMMSSDQSGEKYDIQLDTSGMTNGQDIF--------NGENVITAGKDAKFTVGDSS 226 Query: 234 IENSS--NTISDALENITLNLNDVTTGNQTLTITQDTSKA--QTAIKDWVNAYNSLIDTF 289 SS NT+ + ++ +++ L T N+ L I+ DT + I+ +++AYN+L DT Sbjct: 227 TVYSSSSNTLDNLVDGVSIKLTGTTEANKPLVISVDTDATGTKEQIQAFIDAYNTLQDTI 286 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 S LT S S S GA GD+++ ++ L ++L T + + + GIT D Sbjct: 287 SGLTA-------TGSSSDSRGAFAGDASISSLTNDLSNILRGTFGD---QNMTKFGITAD 336 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 DGKL +DAD L LK + V G+ S ++TG++K + Sbjct: 337 -KDGKLSIDADTLNEQLKSNPQSVADFFNGNNGLIKAMDK--SLDKYLNTSTGLLKGRQE 393 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + + + + R ++ RY +QFTQL +MT +N+T S + Sbjct: 394 TLDRQQRDIDTKTEKMNTRYESSYNRYLKQFTQLQSIMTQMNNTMSMFS 442 >UniRef50_C6WJR8 Flagellar hook-associated 2 domain protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJR8_ACTMD Length = 430 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 200/462 (43%), Gaps = 36/462 (7%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G+ +GLD +SI+ L + A T + +Q S+ +AY L + + + A AL+ Sbjct: 4 VDGLVTGLDTTSIISQLMQIEAAPKTRLQSQVSAQQRVQTAYQALNARMLAVKGAAEALN 63 Query: 66 KADLFSATSTTSSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + A +SS+ A AT GN A+AG T S+T LA+A T ++ AT Sbjct: 64 GDSTWQALKASSSSDAAVATATGNSAVAGSITFSITSLAKAHVAT----AQVPESGGATK 119 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 S L + GG + + + + +G+ +A+N A GV A++I G+ R+ +S Sbjct: 120 GSGLEVTVGGKTTHVDVT----DDTAAGVAEAVNKAGLGVRATVITTTTGQ-RVQFSSAK 174 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 TG + A T++ +D G DA+ + + + ++ N + Sbjct: 175 TGAEQAFTVAGMANDPTVLSQGSDATITVGDPATT-----------GYKLTSADNNFTSV 223 Query: 245 LENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADS 304 L +T+ V + T+T T D+S + +L++ ++ D+ Sbjct: 224 LPGVTVRATKVQN-DVTVTSTVDSSGIGDKVA-------ALVNAVNAAISTAKGYDTYDA 275 Query: 305 QSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTA 364 S + G L GD+ R +++ L + +S +S+ T++ G+ +G+L D K A Sbjct: 276 ASKTAGPLNGDTLARGLRSSLLTTVSG--GGTSFGTMSAFGVALGT-NGQLTFDKAKFVA 332 Query: 365 ALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNA 424 A + D V IG + STTG + A G TL +L + Sbjct: 333 AFEADPEKVRT--AVTDGLVKPYKKIGE--DASNSTTGSLTVAVQGGDTTLRRLNTAISE 388 Query: 425 ASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 ++ ++ ++ ++ L+ M+ LN +S+L+ Q S+ Sbjct: 389 WDTKLASKKVSLQKYYSTLETSMSKLNQQASWLSGQLAGLSS 430 >UniRef50_C6BXM4 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXM4_DESAD Length = 580 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 91/422 (21%), Positives = 163/422 (38%), Gaps = 47/422 (11%) Query: 9 VGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 +G+G D I+ + Q + N ++ + K + L + +T TA ++ Sbjct: 30 LGNGTDFGEIVKNTLKQQGFHQRRLENWRAQWVKKQESLKGLNTKMTELSTALNKMNSIG 89 Query: 69 LFSATSTTSSTTA-FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 F T+SS ++ +AT A Y + + LA+ T+ + K I+ S SK Sbjct: 90 KFMGRVTSSSDSSCVTATADSTAPTSPYKVEIKQLARNDIWTSNSGYASEKDVISPSGSK 149 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINNA---KAGVSASIINVGNGEYRLSVTSND 184 ++I GG I + +++ G+ +N K V I GN EYRL +S Sbjct: 150 ISISCGGKTANIDV---PGGTTVEGLVKMLNATTELKDLVQVEAIKTGN-EYRLKFSSLK 205 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNV------AIENSS 238 G N +T + S + + M QN+++ ++ IE + Sbjct: 206 MGEANRITFNAST---------TLPALAPASMTNLQQGQNSKIKIDGFPEGTDNWIERDT 256 Query: 239 NTISDALENITLNLNDVTTGNQTL-TITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 NT++D + +TLNL T+ + + + DT K ++++V N + ++K A Sbjct: 257 NTVTDGSKGLTLNLKKATSPDSVIVNVNTDTEKIIENVREFVKQVNIVRQALRDISKVDA 316 Query: 298 VDAGADSQSSSNGALLGDSTLRTIQTQLKSML-----------SNTVSSSSYKTLAQIGI 346 L G+ ++ + K + S T + Y TL +GI Sbjct: 317 TK-----DKEKGSILTGNYGVQLASHRFKDITATKGQGFNNFDSATGAGDRYNTLRTLGI 371 Query: 347 TTDPSD-----GKLELDADKLTAALKKDASGVGALIVGD--GKKTGITTTIGSNLTSWLS 399 T+ G L++D +K A+K + GV L D + TI S + Sbjct: 372 ETETDQSSPNFGLLKIDEEKFEKAMKDNPDGVAKLFSADYEASTSSPNFTIKSLIKGVTK 431 Query: 400 TT 401 Sbjct: 432 PG 433 >UniRef50_Q18CX9 Flagellar cap protein n=11 Tax=Clostridium difficile RepID=Q18CX9_CLOD6 Length = 507 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 91/517 (17%), Positives = 183/517 (35%), Gaps = 72/517 (13%) Query: 1 MASIS---SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTF 57 M+SIS G+ D+ I+++ K + Q K Y + Sbjct: 1 MSSISPVRVTGLSGNFDMEGIIEASMIRDKEKVNKAKQDQQIVKWKQEIYRDIIKESKNL 60 Query: 58 QTANTALSKADLFSATST-------TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTT 110 + + +S + A + A Y +V+ +A+ +T Sbjct: 61 YDKYLNGDSPNSITNKKAYSATRITSSDESIIVAKGSAGAEKINYQFAVSQMAEPAKVTI 120 Query: 111 RTTRDDT--KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSA 166 + D + + ++ GG + I IS +++ S I IN+ A + A Sbjct: 121 KLNSSDPIVQQFPPNASGASSLNIGG----VNIPISEQDTT-STIVSKINSLCADNDIRA 175 Query: 167 SIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYD-----ASASSNGMEVSVA 221 S L ++ TG + + L V G+D+L + D + +S V Sbjct: 176 SY---SEMTGELIISRKQTGSSSDIDLKVIGNDSLAGQIASDNGITFTTDASGTKSAVVY 232 Query: 222 AQN--AQLTVNNVAIENSS---NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 +N A +T + + + S N+ ++NI N+N + G+ L DT +A +K Sbjct: 233 GKNLEADVTDDQGRVTHISKEQNSFK--IDNIDYNVN--SKGSAKLVSVTDTEEATKNMK 288 Query: 277 DWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLR 319 +V+ YN+L+D L T + + + G L D LR Sbjct: 289 AFVDDYNALMDKVYGLVTTKKSKDYPPLTDEQKDDMTTEEIEKWEKKAKEGILRNDDELR 348 Query: 320 TIQTQLKSMLSNTVSSSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGAL 376 ++SM + + L ++GI+ G++ +AD + AL D+ V Sbjct: 349 AFVEDIQSMFFG--DADTIIALRKLGISEHENYNKKGQISFNADTFSKALIDDSDKVYKA 406 Query: 377 IVGDGKKTGITTTIGSNLTSWLSTTGIIKAA--------------TDGVSKTLNKLTKDY 422 + G +G + + SK + + ++ Sbjct: 407 LAGYSSNYDDKGMFEKLKKIVFEYSGSSASKLTKKAGMENSSSASQNVYSKQIAEQERNI 466 Query: 423 NAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + ++++ + R +++ L+ L+ +S +Y +Q Sbjct: 467 SRLVEKMNDKEKRLYAKYSALESLLNKYSSQMNYFSQ 503 >UniRef50_C4TU94 Flagellar hook-associated protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TU94_YERKR Length = 435 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 97/462 (20%), Positives = 186/462 (40%), Gaps = 56/462 (12%) Query: 12 GLDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTANTALSK--AD 68 G+D+ ++ +T A ++ + + +A KS L+TF+ A LSK Sbjct: 14 GIDVDALSKQVTQGLFAKRKEKQHKLEQQLKTQQAALDKQKSGLSTFRDALKDLSKVEEG 73 Query: 69 LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 L ++TS + + A+ G Y+ V LA A L T ++ S L Sbjct: 74 LLKNKTSTSIKEVATISANEKALKGTYSFFVEKLASAHQLAYTGL---TDASVKAEQSPL 130 Query: 129 TIQQGGDKDPITIDISAANSSLSGIRDAINNAK--AGVSASIINVGNGEYRLSVTSNDTG 186 + G + + +L+ + AIN+A GV+AS++ NG+ L +TS+ +G Sbjct: 131 GLTVNGQSFSVELK---GVETLADMAHAINHANDNPGVTASVVR-SNGQQILLLTSDKSG 186 Query: 187 LDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN----NVAIENSSNTIS 242 N + S + + A+++ + + + IE+SSNT+ Sbjct: 187 AANKIEFDGSRPAIFS----------TANQQELSLAEDSVVYIGDPSKGLKIESSSNTLD 236 Query: 243 DALENITLNL---NDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVD 299 ++ +TL L V + I + ++ +T IK +++A+N SS ++ Sbjct: 237 KVIDGVTLELVKVQKVGDPLLEVKIEVEPAQTETQIKKFIDAFNGAKSAVSSNNNSDSLS 296 Query: 300 AGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDA 359 ++ L S++ KTL IG++ D +G L+LD+ Sbjct: 297 T-------------------ALKQNLNSLVGKLYGG---KTLGMIGVSFD-RNGDLKLDS 333 Query: 360 DKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKL 418 KLT LK + + L+ G G+ + L +L ++ G +K ++ ++ L Sbjct: 334 KKLTEVLKTSPTLITDLMSGP---DGLINKLDKALDPYLNASDGSLKVRSEMLAMRKTSL 390 Query: 419 TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 + + + +F +L+ +M + ST QQ Sbjct: 391 ERTKEGLENSYARALKTNLLKFNRLNEMMDKMQSTMDMFDQQ 432 >UniRef50_A8KHX5 Putative flagellar hook-associated protein n=1 Tax=Yersinia enterocolitica (type O:9) RepID=A8KHX5_YEREN Length = 422 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 98/461 (21%), Positives = 194/461 (42%), Gaps = 57/461 (12%) Query: 13 LDLSSILDSLTAAQKATLTPISNQ-QSSFTAKLSAYGTLKSALTTFQTANTALSK--ADL 69 +D+ S+ + +T A ++ + + +A KS LT F+TA L K L Sbjct: 3 IDVESLSNQVTKGLFAKRKEKQHKLEQQLKTQQAALDKQKSGLTAFRTALKDLGKVEEGL 62 Query: 70 FSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLT 129 ++TS + + A+ G Y+ V LA A L T TA+ L Sbjct: 63 LKNKTSTSIKEVATVSANEKALKGNYSFFVEQLASAHQLAYTGL---TDTAVKAEQGPLD 119 Query: 130 IQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGL 187 + G+ + + +L+ + AINNA GV+AS++ NG+ L +TS+ +G Sbjct: 120 LTVNGESFSVELKKVE---TLADLAHAINNAKDNPGVTASVVR-SNGQQILLLTSDKSGA 175 Query: 188 DNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN----VAIENSSNTISD 243 N + S + N ++ +AQ++ + + + + IE+SSNT+ Sbjct: 176 ANKIEFSGNSPAIFS----------GNSPKLLSSAQDSVVYIGDPSQNLKIESSSNTLDK 225 Query: 244 ALENITLNLNDVTTGNQT---LTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA 300 ++ +T+ L + + + ++ +T IK +++A+N Sbjct: 226 VIDGVTIELTKAQKAGDPLLEIKVEVEPAQTETQIKKFIDAFN----------------- 268 Query: 301 GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDAD 360 S+ G+ DS ++ L S++ KTL IG++ D +G L+LD+ Sbjct: 269 ---GAKSAVGSNNSDSLSTALKQNLNSLVGKVYGG---KTLGMIGVSFD-RNGDLKLDSK 321 Query: 361 KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWL-STTGIIKAATDGVSKTLNKLT 419 KLT LK + + L+ G G+ + L +L ++ G +K ++ ++ L Sbjct: 322 KLTEVLKTSPTLITDLMSGS---DGLIKKLDKALDPYLNASDGSLKMRSEMLATRKISLE 378 Query: 420 KDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 ++ + + +F +L+ ++ ++ST + +Q Sbjct: 379 RNKEGLENSYARVLKTNLLKFNRLNEMIDKMDSTMNMFNEQ 419 >UniRef50_D2MS44 Flagellar hook-associated protein FliD n=1 Tax=Campylobacter jejuni subsp. jejuni 1336 RepID=D2MS44_CAMJE Length = 647 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 111/455 (24%), Positives = 187/455 (41%), Gaps = 69/455 (15%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQK-ATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 S+SSLG GSG+ LD L A++ A + P + + T K LK+ L+ FQ A Sbjct: 4 GSLSSLGFGSGVLTQETLDKLKEAEQKARIDPYTKKIEENTTKQKDLTELKTKLSAFQAA 63 Query: 61 NTALSKADLFSAT---STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDT 117 ++L + F+ ++ + S + I+VT LAQ ++ +DT Sbjct: 64 VSSLGDSTAFAKRKVIASITDNPPASLSVTSGVALQSMNINVTQLAQKDVYQSKGLVNDT 123 Query: 118 KTAIATS--DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVG-- 172 A+ + LT G + +TID N++ S + D IN A G + A ++N G Sbjct: 124 GIINASLKEPTNLTFFSNGKEYSVTID---KNTTYSDLVDKINTATGGEIVAKMVNTGEK 180 Query: 173 NGEYRLSVTSNDTGLDNAMTLSVSGDDALQ------------------------------ 202 + YRL++TS +TG D+A++ D+ Sbjct: 181 DAPYRLTLTSKETGEDSAISFYPGAKDSDGKYKVDENAKSVFESLGWKLDEDALKAEDFD 240 Query: 203 ---SFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGN 259 S G S + AQ+A+ T++ + + SSNTI+D ITL LN TG Sbjct: 241 PAKSKKGVGIIDSEDNPLHIQKAQDAKFTMDGIKMTRSSNTITDLGVGITLTLNK--TGE 298 Query: 260 QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLR 319 + QD+ A++D V+AYN L+ ++ T Y +S++ + G+L G + + Sbjct: 299 INFDVQQDSESVTKAMQDMVDAYNDLVLNLNAATDY-------NSETGTKGSLQGVTEVN 351 Query: 320 TIQTQLKSMLSNTVSSSS--------------YKTLAQIGITTDPSDGKLELDADKLTAA 365 +I++ + S L T S +L G++ G L D+ + Sbjct: 352 SIRSSIISALFKTQSVDGTVEDTNGNKVSAKVMLSLQDYGLSM-TESGTLNFDSSTFESK 410 Query: 366 LKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST 400 +K++ + G + I T LS Sbjct: 411 MKENPDLTESFFSGITQYKDINYTGDLIKEDSLSK 445 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 52/395 (13%), Positives = 121/395 (30%), Gaps = 38/395 (9%) Query: 101 HLAQAQTLTTRTTR---DDTKTAIATSDSKLTIQQGGD-KDPITIDISAANSSLSGIRDA 156 AQ T + LT+ + G+ + D + ++ + DA Sbjct: 261 QKAQDAKFTMDGIKMTRSSNTITDLGVGITLTLNKTGEINFDVQQDSESVTKAMQDMVDA 320 Query: 157 INNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGM 216 N+ ++A+ + S+ G+ ++ S AL D + Sbjct: 321 YNDLVLNLNAATDYNSETGTKGSLQ----GVTEVNSIRSSIISALFKTQSVDGTVEDTNG 376 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT------LTITQDTSK 270 A L +++ S + ++ T + T +T +D + Sbjct: 377 NKVSAKVMLSLQDYGLSMTESG---TLNFDSSTFESKMKENPDLTESFFSGITQYKDINY 433 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQ------TQ 324 IK+ ++ + + + + L ++ + + Sbjct: 434 TGDLIKE--DSLSKYVGEGDDKGISFSSGKFQIVTNFETYDLSKNADGTDFKLTGKTEQE 491 Query: 325 LKSMLSNTVSSSSYKTLAQIGITTDPSDG----KLELDADKLTA-ALKKDASGVGALIVG 379 + L++ ++S + L + + T DG KL D + A+K D+ + + Sbjct: 492 MLQNLADHINSKGIEGLT-VKVETYEKDGEKGYKLNFKTDGSSDFAIKGDSEFLKQFGLS 550 Query: 380 DGKKTGIT-------TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQ 432 + + L G + + ++ LT+ + ID + Sbjct: 551 QTSIAAEAVEGVGVFAQLKTTLQGITGKDGSLTKYDESLTNDTKSLTQTKESTQTLIDTR 610 Query: 433 VARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 Q+ Q + ++ LN + +T +NS Sbjct: 611 YDTMANQWLQYESILNKLNQQLTTVTNMINAANNS 645 >UniRef50_C4XHC1 Flagellar hook-associated protein 2 n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHC1_DESMR Length = 563 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 27/392 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+ G+G+G D S++ L +++ +T + + S+T K +A+ L + + T +T+ Sbjct: 15 GQITYSGLGNGTDFDSMIKKLVQVEQSRITSLQTWKKSWTDKQAAFQELNTQMLTLKTSL 74 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + D F + +S +T SA A G + + V LA A+ + T T T Sbjct: 75 EDMDSMDEFMTKAVDSSDSTVVSAVAGAGAENGSHEVVVNRLATAKAMVTATGYASASTD 134 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRL 178 I +S S + + AN +L+ + INN + GV AS+ G+ +Y L Sbjct: 135 INSSSSDAMFAYTYKGVTYSNTV-GANCTLTDLASIINNDPSNPGVKASVSYDGS-KYYL 192 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + DTG ++ + + + L F D S ++ + + T + I + Sbjct: 193 QLRGMDTGSTASLVI--ASNSTLSGFGNSDFSTITSNASAQLK-LDGWPTASGSWITRET 249 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N+++D + +T+ L +TG+ T+ T DT + I+ +V N + +++ Sbjct: 250 NSVTDLIPGLTMTLK--STGSATVVTTTDTDAIKEKIETFVEQVNLVRTKIQEISRV--- 304 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-----SSYKTLAQIGITTDPS-- 351 DS + L G+ ++ I T LKS ++ Y TL+Q+GI TD Sbjct: 305 ----DSTTQQASLLTGNYGIQLIDTNLKSAVAGLGVGFDYDQDKYSTLSQLGILTDAEQG 360 Query: 352 ---DGKLELDADKLTAALKKDASGVGALIVGD 380 +G L +D D L A L +A VG L Sbjct: 361 STTEGLLVIDDDVLDAVLASNADAVGQLFAAQ 392 >UniRef50_D2TJ96 Lateral flagellar hook associated protein 2 n=2 Tax=Citrobacter RepID=D2TJ96_CITRO Length = 439 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 39/442 (8%) Query: 32 PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSAT-STTSSTTAFSATTAGNA 90 + QQS A+ + TL SAL FQTA AL+ T S T++ + + T A Sbjct: 22 NLQKQQSELDAESNGLDTLSSALNDFQTAIDALNSDTDGPVTFSATANNDSATITANSQA 81 Query: 91 IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSS- 149 AG Y+ V LAQAQ T + D + G I + + N Sbjct: 82 QAGTYSFYVEQLAQAQQSTFDLSDDTFSA-----TGTFELTMGDSTMDIDLAAADQNGDG 136 Query: 150 -----LSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 S + AIN++ GVSA+++ +G + +TS TG +A ++S+SG DA Sbjct: 137 DGYIDASELVSAINHSDDNPGVSAALVKT-DGATTIMLTSETTGAQSAFSVSISGHDASG 195 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDVTTGN 259 D SA++ + AAQ+A + + AI NS+NT +D + +++ ++VT N Sbjct: 196 -----DTSATAPTLTEMTAAQDAIIHLGSATGPAITNSTNTFNDVIPGVSMTFSEVTGEN 250 Query: 260 ---QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDS 316 T T+ +D+S Q ++ +V+AYN+L+DT SLT + S S+S G GDS Sbjct: 251 DDLTTFTVAEDSSGTQAKVQTFVDAYNTLVDTVDSLTS-------SGSDSTSAGIFAGDS 303 Query: 317 TLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGAL 376 L+++ +QL + + S GIT D G L++D+D A++++ G+ A+ Sbjct: 304 GLKSLTSQLDDLAHASYGGVSI---VDYGITLDAH-GHLQIDSDAFNEAMEENPEGLTAI 359 Query: 377 IVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 VGD + + S+ GI+ + +K+ + + ++ + RY Sbjct: 360 FVGDDSMVAQMDELMESY--LDSSNGILTLRQQNIDDQQDKIQSEADRLTETYNNNYERY 417 Query: 437 KEQFTQLDVLMTSLNSTSSYLT 458 E++T + + ++ ++ + Sbjct: 418 VEEYTNTLIEVYTMQTSMAAFM 439 >UniRef50_B7R845 Flagellar hook-associated protein 2, putative n=4 Tax=Thermoanaerobacteraceae RepID=B7R845_9THEO Length = 620 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 93/473 (19%), Positives = 168/473 (35%), Gaps = 63/473 (13%) Query: 36 QQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKY 95 + ++ +SA + + T + L + LF ++ T + Sbjct: 169 KDANINNVISAINSASKSTGIVATYDQNLDR--LFLVSNVTGDNSLI---DFSGTDVIGI 223 Query: 96 TISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRD 155 + L T + + S +T + + + AN+++ D Sbjct: 224 NFLSSKLKLPITKASTAQLGLGGATGVVTTSDITFKLNNEPITVK-----ANATVQDFVD 278 Query: 156 AINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNG 215 AIN + V AS + + R+ +T+ ++ SG DA D + Sbjct: 279 AINLNSSTVQASYDSASD---RIILTAKQ-----GYSIDFSGTDANGISFLNDTLKFTVS 330 Query: 216 MEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAI 275 Q+A T N V I +S+N ++ A N+TL + N TLT++ D K I Sbjct: 331 -SPLAKGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTASGQNITLTVSTDVDKIYNTI 389 Query: 276 KDWVNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTL 318 K++V+ YN +I + D + + +G L D TL Sbjct: 390 KNFVDTYNDVITQMYTKLTEKRYYDYPPLTDEQKQAMKENDIKLWEEKARSGDLANDETL 449 Query: 319 RTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGAL 376 L+ ++S+TVS +L+ IGITT GKL +D KL A+ + V + Sbjct: 450 MRAYYSLRQVVSSTVSGVG--SLSSIGITTGQWYEGGKLYIDEAKLKDAIANNLDKVMQI 507 Query: 377 IVGDGKKTGI-------TTTIGSNLTSWLSTTGIIKAATDG----------------VSK 413 G G + + G++ A + + Sbjct: 508 FTGVYSSDGTTLVSKGIAQQLYGYFENGTFKEGVLGTAINAITRKAGSSTQLYDNSFIGN 567 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + ++ R+ RY QFTQL++ + +N+ S++L QQ + Sbjct: 568 RIREIDDRIAEMQKRLKDLEDRYYRQFTQLEIFVGQMNTQSAWLNQQIGIMTK 620 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 83/452 (18%), Positives = 154/452 (34%), Gaps = 72/452 (15%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ-TANT 62 + G+ +GLD SI+ L L ++ Q+ + + + + L + Sbjct: 15 LRIGGLATGLDTDSIVKQLMKVASLPLDKLNQQKQWYQWQQEDLRDINAKLMNLRNNVVA 74 Query: 63 ALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTR---------T 112 +L F A + TSS + +AT NA+ G YT+SVT LA A + + Sbjct: 75 SLRLQGTFMAKTVTSSNPSVATATAGANAVNGTYTLSVTQLATAAATASTDRIGAYYIDS 134 Query: 113 TRDDTKTAIATSDSKLTIQQ-GGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASII 169 A+ T+ S +T++ D + I +++++ + AIN+A G+ A+ Sbjct: 135 DNKIQYNALNTTGSDITLKLRNKDGTTFSDIIIPKDANINNVISAINSASKSTGIVATYD 194 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 + RL + SN TG ++ + S + + SS A AQL + Sbjct: 195 QNLD---RLFLVSNVTGDNSLIDFSGTDVIGINFL-------SSKLKLPITKASTAQLGL 244 Query: 230 NNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +++ I+ L N + + T ++D+V+A N T Sbjct: 245 GGATGVVTTSDITFKLNNEPITVKANAT-----------------VQDFVDAINLNSSTV 287 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTD 349 + DS I K S S + GI+ Sbjct: 288 QASY---------------------DSASDRIILTAKQGYSIDFSGTDAN-----GISFL 321 Query: 350 PSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 K + ++ L K + + T+ + TT + T Sbjct: 322 NDTLKFTV-----SSPLAKGQDAIFTFNGVQITSSTNNVTVAGINVTLTGTTASGQNITL 376 Query: 410 GVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 VS ++K+ D + + + + T Sbjct: 377 TVSTDVDKIYNTIKNFVDTYNDVITQMYTKLT 408 >UniRef50_A4C6F7 Flagellar hook-associated protein 2 n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6F7_9GAMM Length = 561 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 178/412 (43%), Gaps = 26/412 (6%) Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + S + L +++ T + S + ++ LA + T + Sbjct: 165 SVVKGDSGSYLTLSSNQTGDNSVLSLNVTDSDGFLHDDSGLSQLAFSYGETRSNQTFNAG 224 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 + A I G D I++ A ++ + D IN A V+AS+ + G ++L Sbjct: 225 ESFAVGS--FDISNGTDTATISV---LAGETIEQVVDKINAAGINVTASLEDDNAGGFKL 279 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN-VAIENS 237 S++ ++ + ++ A S S + AA AQ+T+N + + + Sbjct: 280 VYQSSNDYGNHQVAIT----SADASMSKLLKSHEYANFTENTAASKAQITLNGSIVVTSE 335 Query: 238 SNTISDALENITLNLNDVTTGNQ--TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 +NT +A+ ++L + + I D + A+K +V +YN + + LT+ Sbjct: 336 TNTFENAVAGLSLEVKKAHDATASDNIKINLDKGSTEEAVKKFVESYNEMFAVVAELTQV 395 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT--LAQIGITTDPSDG 353 + + G L+GDST+RT+ QL+ L V+ + T LA IGI T DG Sbjct: 396 N--------EDGTAGQLVGDSTIRTMMNQLRGALGGIVTIDKFSTQSLASIGIKT-ERDG 446 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 L L+ LT L + GAL GD GI + + ++ + GI+++ + Sbjct: 447 TLSLNEATLTKQLNSNFEQFGALFAGD---EGIGKALSNVVSEYKGIGGIVESKIKSATS 503 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNS 465 +++++ ++ +R+ AR QFT +D+L++ L +T YLT Q + S Sbjct: 504 SIDRINEERTDFDERMGRYEARLFSQFTTMDLLVSQLQATGDYLTAQLDALS 555 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 15/280 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPIS-NQQSSFTAKLSAYGTLKSALTTFQT 59 MA++SS G+G+G ++ + SL AA++ ++ T ++S G LKSAL+ Sbjct: 1 MATLSSPGIGTGFKVTETVQSLVAAEREPFDKKKLAAENKLTEQISGLGKLKSALSDLDD 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L FS S+ F+A A Y + V +A Q +TT Sbjct: 61 TIFDLKLPTTFSKRQVDYSSDFFTAEAGSAASVSSYDVQVNKVAAGQKVTTGPIDASA-- 118 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 A L I+ G +I + A +++ I IN +A GV+AS++ +G Y Sbjct: 119 --AIGSGTLEIRSLGLNKGFSIAV-EAGQTINDIAAQINGSSANFGVTASVVKGDSGSY- 174 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQ-SFMGYDASASSNGMEVSVAAQNA--QLTVNNVAI 234 L+++SN TG ++ ++L+V+ D G A S G S NA V + I Sbjct: 175 LTLSSNQTGDNSVLSLNVTDSDGFLHDDSGLSQLAFSYGETRSNQTFNAGESFAVGSFDI 234 Query: 235 ENSSNTISD-ALENITLN--LNDVTTGNQTLTITQDTSKA 271 N ++T + L T+ ++ + +T + + A Sbjct: 235 SNGTDTATISVLAGETIEQVVDKINAAGINVTASLEDDNA 274 >UniRef50_A6Q2P7 Flagellar hook-associated protein 2 FliD n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2P7_NITSB Length = 452 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 122/474 (25%), Positives = 211/474 (44%), Gaps = 38/474 (8%) Query: 1 MAS-ISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 MA +S G+ +G D ++ LD L + L + QQ AK +A +KSAL+ F Sbjct: 1 MAGEMSITGLTNTGFDYNAYLDKLAQLKSIPLQQMQAQQQKIIAKSTAIVQVKSALSDFL 60 Query: 59 TANTALSKADLFSATSTT-SSTTAFSATTAGN-AIAGKYTISVTHLAQAQTLTTRTTRDD 116 + T L + ++ T S+ S + G A G Y + V LA+A + ++ Sbjct: 61 SPLTTLQDSSIYDKLDATLSNDNIASVSVDGTKAQPGSYNLEVVQLAKASSFLISPAQNV 120 Query: 117 TKTAIA-TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 T A T LTI D ++DI SL+ I + IN + A + A++IN G+ Sbjct: 121 TDPNAAFTDSGTLTINYKLDGTATSLDIDYTGKSLADIVNEINQS-ADLEATMINSGSST 179 Query: 176 ---YRLSVTSNDTGLDNAMT--LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 YR+ VTS TG+DN +T GD+ D S + AAQNAQ+ +N Sbjct: 180 SPDYRILVTSKKTGIDNEITGISDSDGDNTTGFDTNSDPSTDPRASYTTQAAQNAQIKLN 239 Query: 231 NVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFS 290 + IEN++NT SD L + + +V G +LT+ +D S + ++ V+AYN+L DT + Sbjct: 240 GIIIENATNTFSDVLSGVEITAQEV--GTSSLTVAKDFSDIENSLDTIVSAYNTLKDTIN 297 Query: 291 SLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDP 350 +T + L G+ +L I T + + L++ + Y L G + Sbjct: 298 QVT-------------AKGQPLQGEGSLSRITTTIFNKLNSVL--GQYGLLDTTG-EGEA 341 Query: 351 SDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDG 410 + GKL L D L +L D + T + + S + ++ +I Sbjct: 342 ATGKLVLKKDAL-ESLFNDPN-----FDAKTTFTNMARDLESYVNNYTDNMTLINER--- 392 Query: 411 VSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + +++ K+ S+RI ++ + ++ +++V ++ L T + + Sbjct: 393 YLEQSDRIQKEIEEKSERIQKEIDALRTRYAKINVYLSQLQDTRLRIENFTKAL 446 >UniRef50_C8WT49 Flagellar hook-associated 2 domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WT49_ALIAD Length = 514 Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 130/494 (26%), Positives = 214/494 (43%), Gaps = 49/494 (9%) Query: 10 GSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 G+GL ++ + L + L P+ +Q S+ T++ SA +L+SAL TFQ A L+ Sbjct: 31 GNGLPVTQYVQDLQTILQQELEKPLQSQISTLTSQQSALSSLQSALQTFQQATETLASLQ 90 Query: 69 LFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQ-TLTTRTTRDDTKTAIATSDS 126 +S ++TS+++ S T + A G Y+I VT LAQAQ T T + A + Sbjct: 91 SWSTVQASTSNSSVLSVTASAGASVGTYSIQVTSLAQAQTTFQTSGLQSTANGASTLASG 150 Query: 127 KLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAK--AGVSASIINVGNGEYRLSVTSN 183 L I + I+ A SL I +AIN GV+AS+I+ G Y L+++S Sbjct: 151 TLVITPNTLNKAQPVSINIAQGESLQDIANAINEKTTQTGVAASVISNGQNSYFLALSSI 210 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISD 243 TG T++ + + + + + AQNA + V + +S+NT + Sbjct: 211 QTGQAYGFTVTETNVGSNGAQIAFQTDT---------QAQNATIVVGGQTLSSSTNTFQN 261 Query: 244 ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGAD 303 + N+T+ LN++ G +T++ DTS A+ A++ W+NAYN+LIDT T YT Sbjct: 262 YIPNVTIQLNNI--GTANVTLSNDTSGAEKAVQTWMNAYNTLIDTIRQDTAYTPASGAK- 318 Query: 304 SQSSSNGALLGDSTLRTIQTQL--KSMLSNTVSSSSYKTLAQIGITTDPSDGKLEL---- 357 SSS G L GD + + Q+ + +S Y +LA IGI DP+ G LE Sbjct: 319 -TSSSAGPLFGDPLTQGLLQQIPAAVSSVASSVASQYNSLASIGIVLDPTTGHLEFQSAS 377 Query: 358 -----------DADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS------- 399 AL + S V L L + + Sbjct: 378 GFSSAAGTLPDGQTMFQQALASNLSAVEQLFGVVDTTAPQAIPTSGVLGNLYNLLNTMLI 437 Query: 400 ------TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNST 453 I++ + L N +I +V +Y+ Q +L+ +M + Sbjct: 438 GNPNGTGQSPIQSEISALQSQQTTLQNYLNLVDAQIQDRVQQYENQLNKLNSVMQQAQAQ 497 Query: 454 SSYLTQQFENNSNS 467 L+ F+++S++ Sbjct: 498 MQQLSALFKSSSST 511 >UniRef50_Q7NVN7 Probable flagellar protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVN7_CHRVO Length = 458 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 128/474 (27%), Positives = 222/474 (46%), Gaps = 28/474 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+SIS+ LD+ SI+ L A L + S++ ++LS G + SAL+ Q+A Sbjct: 1 MSSISAS--AGPLDVQSIVSQLIQADSQPLAQSRQRASTYQSELSVIGQVSSALSALQSA 58 Query: 61 NTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD---- 115 + L S TSS T S +T+ AG Y ++V+ LA+++ L + Sbjct: 59 ASTLQSGSFLQQFSATSSDSTVASVSTSSGGAAGTYVLNVSQLAKSRQLVFDQNPNGSAI 118 Query: 116 -DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 D AI+ + S L+ GG + + +N+SLS I ++IN A GV+ASI+ N Sbjct: 119 TDQNAAISGAPSSLSFSVGGASSTVQL---GSNASLSSIANSINGAGIGVNASIVQY-NN 174 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASA--SSNGMEVSVAAQNAQLTVNNV 232 Y L ++S G NA +++ G D+ + A S+ S AQ+A +TVN V Sbjct: 175 TYSLVLSSAQAGPGNAFSITAGGTDSNNTSGNTLAGLQQSATAASESANAQSALMTVNGV 234 Query: 233 AIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSL 292 + + SN+++ + T+NL TG T+ + Q T+ ++ ++NAYN +I T +S Sbjct: 235 NVSSDSNSVTSVVNGATINLEK--TGQVTINMAQSTTNITNTLQTFINAYNQVITTTASA 292 Query: 293 TKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS----SSYKTLAQIGITT 348 T+ + + +G L ++Q + S+L V SSY LAQ+GI T Sbjct: 293 TQSHTTVGSTPTNTDISGDLT------SLQEHMASILGTPVKGVDATSSYAYLAQVGI-T 345 Query: 349 DPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 +DG L LD+ AAL + S V L G+ + TG+ + + S L G+I + Sbjct: 346 QKADGTLTLDSSAFNAALTANPSAVANLF-GNSQNTGVANVFNTTINSLLGPNGLITSNQ 404 Query: 409 DGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFE 462 ++ + + ++++ + +++ L+ + + SS + Sbjct: 405 TNLNSKVTAEQQLQERLQNQLNNEQTSLLTEYSNLNSELAQMQQASSSMANLIA 458 >UniRef50_C6NYH3 Flagellar hook-associated protein fliD n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYH3_9GAMM Length = 543 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 116/408 (28%), Positives = 199/408 (48%), Gaps = 22/408 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 +S GV S + S++ + A + + + ++SAYG L S L Q+A Sbjct: 1 MSISGVLSSSQIQSLVKAAENQYNAPIATLQAEAKPLETEISAYGNLSSVLGGLQSAVQG 60 Query: 64 LSKADLFSA-TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 L + + ++ SAT + A G Y+++V+ LA AQ+L + T A Sbjct: 61 LMDLSSLTQVQANVGNSAILSATASNAAPTGSYSVTVSGLATAQSLYSSDYSSQTS---A 117 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTS 182 L+IQ G + + ID++++N +L G+ +AIN + AGV+AS++ G G YRL+V Sbjct: 118 IGTGTLSIQVG-NGAAVNIDVTSSNDTLDGLANAINQSGAGVTASVVYDGTG-YRLTVIG 175 Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTIS 242 N TG NA ++S +G + G+ ++ ++GM S AAQNA +VN +++ ++SNT S Sbjct: 176 NQTGSGNAFSISTTG----SALSGFSYASGASGMTESQAAQNATASVNGISLTSASNTFS 231 Query: 243 DALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGA 302 A+ ++ ++ TG+ ++++ TS AQ+AI+D+V A+N S T YT A Sbjct: 232 GAIPGVSFTVSA--TGSTSISVGVSTSDAQSAIQDFVQAFNKASSFIQSATAYTPASGTA 289 Query: 303 ------DSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT----TDPSD 352 S + G L+GD ++ I+ QL S++S + S IG T S Sbjct: 290 AVSATGTVASGTAGPLIGDPVVQGIENQLLSIISTATAIGSGGAADAIGFGNIGITLTSS 349 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST 400 G + +D L +AL + + V L G + + ++ Sbjct: 350 GTITVDQSALNSALSSNYAQVMGLFGAMGGSNNPSVQFSGATSGTVAG 397 >UniRef50_Q4JMQ7 Predicted flagellar associated protein n=1 Tax=uncultured bacterium BAC17H8 RepID=Q4JMQ7_9BACT Length = 542 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 102/425 (24%), Positives = 192/425 (45%), Gaps = 25/425 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL-TPISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 +SSL VGSGL+ I+D+L A++A + I+ + T ++S+ G +K TF + T Sbjct: 6 LSSLNVGSGLNTKEIIDALVEAERAPKASEITTAKEKRTVEISSLGQVKQGFETFDNSLT 65 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 + + SA S++ ++ A + A A +I +T +A QTL +T + Sbjct: 66 PVKEITGLSA-SSSGTSMAVEISDAKVASNFSNSIEITAVASGQTLVFGGYSSETASTGT 124 Query: 123 TS--------DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 + +S + + + + ++ +L+ +RDA+N A V+ASI+ G+ Sbjct: 125 GTLTFSFGTWNSDNSFTANSSRSDVAVQLATGAGTLADLRDAVNAANMDVTASILKTGSS 184 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 Y L + + + G +AM ++ S D + + N +VAA +A T++ VA+ Sbjct: 185 TYALVLKARE-GAAHAMRVTASEDTGAAGLANFAYTT-PNNSVQTVAAADAAFTMDGVAV 242 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 +N ++D ++ + L + T+ +T++ + DT+ AQ A++ V+ NS+ T L+K Sbjct: 243 TRETNEVTDLIKGVKLTVKSTTSAAETISGSYDTTLAQAAMQIMVDQINSIGTTLRDLSK 302 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK--TLAQIGITTDPSD 352 A L GD+ + ++ QL+ + ++ L G+TT+ D Sbjct: 303 RGAAGEED-------APLAGDAYVMMLRRQLRGYTTTPITGFGDNDIYLTDFGVTTN-RD 354 Query: 353 GKLELDADKLTAALKKDASGVGALIV---GDGKKTGITTTIGSNLTSWLSTTGIIKAATD 409 G L LD K + D AL G + + G+ + T I +T Sbjct: 355 GTLSLDTAKFQKTYEADPDAFAALTTSRITSGSELVSASVAGTYPKEGVYTFDIASDSTA 414 Query: 410 GVSKT 414 ++ T Sbjct: 415 TLNGT 419 Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 32/78 (41%) Query: 388 TTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLM 447 ++ L+++G ++ ++ L+ +D A + I AR++ QF ++ + Sbjct: 459 ESLDDFSRDVLASSGDLQQKITSYNEDLSDYDEDIAALDESIARLRARHEAQFAAMNAAV 518 Query: 448 TSLNSTSSYLTQQFENNS 465 SL T L E Sbjct: 519 ASLKETEKALDNMMEAWK 536 >UniRef50_Q0BJF7 Flagellar hook-associated 2 domain protein n=8 Tax=Burkholderia RepID=Q0BJF7_BURCM Length = 475 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 150/474 (31%), Positives = 236/474 (49%), Gaps = 37/474 (7%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSF-TAKLSAYGTLKSALTTFQTAN 61 SI S S LD+SS++ +L A+ A T + + +LSA G LKSAL+ QTA Sbjct: 23 SIISGATNSTLDVSSLVSALVTAKTAGQTQTLTTKQTHDNTELSAVGKLKSALSALQTAI 82 Query: 62 TALSKADLFSATSTTSSTTAFSATT--AGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 L+ S + T+S T +A+ G A+AG Y ++VT LA A L++ Sbjct: 83 AGLANGSTLSGLAATASGTGITASVKNGGGAVAGSYAVNVTQLATANKLSSAGITASDTI 142 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN--NAKAGVSASIINVGNGEYR 177 A + L G +++ AA +SLS I +IN GV+AS+I +G++ Sbjct: 143 AAGSLSITL-----GSNAAFNVNV-AAGASLSDIATSINTTAGNPGVTASVITGSDGQH- 195 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENS 237 L + SN+TG N +++S +G +A ++G A +AQLTV+ + ++ Sbjct: 196 LVIQSNNTGAANTVSVSGTGVNAKL----------TSGYSTVTKAADAQLTVDGTPVSSA 245 Query: 238 SNTISDALENITLNLNDVT-TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 SN++S L +TLNL QT+T++QDT+ +AI +VNAYN + T SL+ Y Sbjct: 246 SNSVSGVLTGVTLNLTPAALNTTQTVTLSQDTTATTSAINAFVNAYNGYVTTAKSLSSY- 304 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT---LAQIGITTDPSDG 353 D +S+ G LLGD+ L TI + L + +S V + S T LA IGI DG Sbjct: 305 ------DPNTSTAGPLLGDAMLNTISSGLATAISGGVKTGSPSTTYSLAAIGINLQA-DG 357 Query: 354 KLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSK 413 L++D+ L AL ++ V AL G+ T+ + ++ G+I T ++ Sbjct: 358 TLQVDSTALNTALTSNSPTVAALF---NTTNGVGQTLNKLVNTYTQANGLIDQRTTALNA 414 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 L L+ + D A+Y QFT L+ LM ++ + + YLTQ F +++ Sbjct: 415 DLKNLSNQATQLKNYSDQLTAQYNAQFTALNNLMATMANNTKYLTQLFGGTNSA 468 >UniRef50_B9D404 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=B9D404_WOLRE Length = 577 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 29/424 (6%) Query: 1 MASISSLGVGSGLDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + +SSLG GS + +++ L AA + + P++N+ ++ K LK+ + TF++ Sbjct: 3 LGKVSSLGFGSQVLTQDVINKLKAADEAGQIKPVTNKIAANATKQKDLTALKTLIGTFRS 62 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + +AL+ + +T+S + + + I V LA+ + T + Sbjct: 63 SVSALADDSSYQKRTTSSDGKSADISVSPGVAVQNIDIDVKQLAKKDVYQSTKF--GTSS 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINV-GNGEYR 177 + + I+ G I + ++++L + D IN G VSA + V G Y+ Sbjct: 121 SFIGKNGTFGIKVGNQTYKIEVK---SSTTLEELADKINEVTNGAVSARAMKVGGEDPYQ 177 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYD------ASASSNGMEVSVAAQNAQLTVNN 231 L + S +TG DN + ++ +D D +++ AQ+A+ N Sbjct: 178 LILQSKETGADNKIEITNVDNDGNALNGADDVLQKLGWDSANIANNKISTAQDAEFVYNG 237 Query: 232 VAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSS 291 + I+ S N I D +T+ L D TG T ++ +DTS + ++K V AYN+L++ Sbjct: 238 ITIKRSGNEIKDLNLGMTIKLKD--TGKTTFSVKEDTSAIKESMKSMVTAYNNLVNNLKV 295 Query: 292 LTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK-----TLAQIGI 346 T Y DS + +G G + TI++ L +L + + LA G+ Sbjct: 296 ATDY-------DSDTKKSGTFQGVGEINTIKSTLNKILFGNQTYTKDNVTKTANLADYGL 348 Query: 347 TTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKA 406 + + +G LELD+ KL L +D V + G + + G Sbjct: 349 SLN-KEGLLELDSSKLGKKLDEDLQSVQKIFAGGTTYGTAQVLSSKPVDGGALSIGGEDL 407 Query: 407 ATDG 410 +G Sbjct: 408 VING 411 Score = 42.3 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%) Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 +T + S G + +++ L K+ +DA+ A +E+F D Sbjct: 495 FASTKKAVDGLINSKNGSLTKYAQSLTEEKKTLDKEKEKTQKTLDAKYATMEERFLAYDK 554 Query: 446 LMTSLNSTSSYLTQQFENNSNSK 468 +++ LNS S L E N K Sbjct: 555 IISKLNSEFSSLKSMIEAEYNKK 577 >UniRef50_D2BX26 Flagellar hook-associated 2 domain protein n=3 Tax=Dickeya RepID=D2BX26_DICD5 Length = 484 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 179/457 (39%), Positives = 269/457 (58%), Gaps = 24/457 (5%) Query: 24 AAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFS 83 + LTP + S +A+ AY +++++ + QTA T L ++T+ TS+ TAFS Sbjct: 39 TVEAQRLTPYQTKSDSLSAQAKAYSAVEASMKSLQTATTTLQNMKSITSTAVTSTNTAFS 98 Query: 84 ATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI----ATSDSKLTIQQGGDKDPI 139 A+T A+AG Y+I V +LAQAQ+ + + + +++ S +TI Q P+ Sbjct: 99 ASTDSTAVAGTYSIFVNNLAQAQSQISGAFSSASTALVSGGTSSTSSTITISQSSQSTPL 158 Query: 140 TIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDD 199 TI ++ +SL+ IRDAINNA GVSASI+N G Y L +T+ DTG +AMT+SV Sbjct: 159 TISLTDDKTSLNDIRDAINNAGGGVSASIMNNGTSNY-LMLTAKDTGTKSAMTISV---- 213 Query: 200 ALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT--- 256 + S+S VAA++A T+N +++ + SNT++ A+ +TLNL + Sbjct: 214 ------SGNLSSSLGSFTEQVAAKDASFTLNGMSVTSQSNTVATAITGVTLNLKAASATG 267 Query: 257 TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA---VDAGADSQSSSNGALL 313 + + L+I+ D + Q AI++WV AYN+++DT + T Y D +QS+SNGAL+ Sbjct: 268 SSAENLSISSDATGTQQAIQNWVTAYNNVLDTIKTQTNYNPPSATDTSNGTQSASNGALV 327 Query: 314 GDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTD-PSDGKLELDADKLTAALKKDAS 371 GDST+RTIQ QL+S+++N + S T+A +GIT D ++GKL +D KLT LK A Sbjct: 328 GDSTVRTIQRQLQSLMTNLQTGSGSLHTMADLGITQDPTNNGKLLVDNTKLTNTLKTSAG 387 Query: 372 GVGALIVGDGKKTGITTTIGSNL-TSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRID 430 V GDG TG T G+ L + S+ G+IK+A G+ + +TK + D ID Sbjct: 388 SVTTFFTGDGSTTGFATQAGNYLSKTLDSSDGLIKSAQAGIKTSQATVTKQLASIQDSID 447 Query: 431 AQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 A + RYK QFTQL+ L++ L+STSSYLTQQF S+S Sbjct: 448 ATMNRYKTQFTQLNTLLSKLSSTSSYLTQQFNKTSSS 484 >UniRef50_Q5DY02 Lateral flagellar hook associated protein 2 (FliD-like) n=8 Tax=Enterobacteriaceae RepID=Q5DY02_ECOLX Length = 438 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 115/442 (26%), Positives = 205/442 (46%), Gaps = 40/442 (9%) Query: 32 PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSAT-STTSSTTAFSATTAGNA 90 + +Q+ A+ S +L SAL+ FQ+A AL+ T + TS+ + + + A Sbjct: 22 NLQEKQTELDAESSGLDSLSSALSDFQSAVDALNSDTDGPVTFAATSNNDSATVSANSQA 81 Query: 91 IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANS-- 148 AG Y+ V LAQ Q T D ++ + G I + + N Sbjct: 82 QAGSYSFFVEQLAQGQQTTFSMGDDAF-----SATGTFELTMGDSTMDIDLSAADQNGDG 136 Query: 149 ----SLSGIRDAINNA--KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQ 202 S + +AIN++ GVSA+++ +G + +TS+ TG +A ++SV+G DA Sbjct: 137 DGFIDASELVNAINDSDDNPGVSAALVKT-DGTTTIMLTSDSTGAQSAFSVSVTGHDASN 195 Query: 203 SFMGYDASASSNGMEVSVAAQNAQLTVN---NVAIENSSNTISDALENITLNLNDVTTGN 259 S S+ V +AQ+A + + AI NSSNT D + +T+ +V+ + Sbjct: 196 D------STSAPVATVVSSAQDAIIHLGSATGPAITNSSNTFDDVIPGVTMTFTEVSDSD 249 Query: 260 ---QTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDS 316 T I++D+S +Q ++ +V+AYN+LIDT SLT + S+S G GD+ Sbjct: 250 SDLTTFNISEDSSSSQEKVQTFVDAYNTLIDTVDSLTTHGD-------DSTSAGVFAGDA 302 Query: 317 TLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGAL 376 L ++ QL + + + S GIT D G L++D+D+ + K+ G+ ++ Sbjct: 303 GLSSLANQLDDIAHASYNGVSI---VDYGITLDSH-GHLQIDSDQFNDEMAKNPDGLTSI 358 Query: 377 IVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 VGD + + T S+ GII + ++K+ + + +D +A RY Sbjct: 359 FVGDNSMVAQMDDLINTYTD--SSNGIITLRQQNIDDQMSKIQDEGDQLTDTYNANYDRY 416 Query: 437 KEQFTQLDVLMTSLNSTSSYLT 458 E++T V + ++ ++ + Sbjct: 417 LEEYTNTLVEVYTMKASMAAFA 438 >UniRef50_Q2B1U4 Flagellar hook-associated protein n=2 Tax=Bacillus RepID=Q2B1U4_9BACI Length = 688 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 76/410 (18%), Positives = 142/410 (34%), Gaps = 54/410 (13%) Query: 103 AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDIS---AANSSLSGIRDAINN 159 A + + D + S G + + SL+ + + +N+ Sbjct: 284 ATGKVMFNGINLKDASVKVEYQQSYFNFNVGSHTSKGFVSENFNIQGTESLNNVINKVNS 343 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTG------------LDNAMTLSVSGDDALQSFMGY 207 + AGVS + + ++++T +TG + + DD + + + Sbjct: 344 SSAGVSMFYDSFKD---KVTLTRTETGNFHGLDSNPVDKDGKEIARTPLADDEIVTSGDF 400 Query: 208 DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDV-TTGNQTLTITQ 266 NA T+N + E SSNT + +T +L + ++I Sbjct: 401 INRVLGFEKAAETGGDNAVFTINGLETERSSNTFD--ISGVTFSLKQTFSDAPVNISINN 458 Query: 267 DTSKAQTAIKDWVNAYNSLIDTFSSLTK-----------------YTAVDAGADSQSSSN 309 +T+ IK +V YN LI + + + + Sbjct: 459 NTNAIFDNIKGFVEKYNELIGKIQGEISEEKYKSYTPLTDEQREQLSDKQQEQWEEKAKS 518 Query: 310 GALLGDSTLRTIQTQLKSMLSNTVSSSS----YKTLAQIGITTDP---SDGKLELDADKL 362 G L D TL ++ T +++ +V+S YK L+ IGI T GKLE++ +L Sbjct: 519 GTLRRDPTLTSLLTSMRTDFYTSVNSEGINPLYKQLSAIGIKTTANYLEGGKLEINEAEL 578 Query: 363 TAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST---------TGIIKAATDGVSK 413 A++ D + + L G + + ++ + K Sbjct: 579 KKAIEADPASIEKLFNASGTTNDQKGIVQRLYDTVNTSMEKVKLKAGNSFSTNQQFTMGK 638 Query: 414 TLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 L+ L K ++ R+ RY QFT ++ + N +YL QQF Sbjct: 639 QLDSLNKSIDSFESRLTQVENRYWSQFTAMEKAIQRSNEQMAYLMQQFGG 688 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 98/295 (33%), Gaps = 11/295 (3%) Query: 13 LDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSA 72 +D+ ++ L A++ L + ++ + Y ++ + L F+T T + + + A Sbjct: 1 MDIDQLVSDLMKAERMPLDKMKQKKQVMEWQRDDYRSMNTLLLNFRTELTQMKLSTSYRA 60 Query: 73 TSTTSSTTAFSATTAGNAIAGKYTI--SVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTI 130 ST+S+ A TA +A A +V LA A T K L Sbjct: 61 RSTSSTNEARVTATATSAAALASYSISNVKKLASAATKVNTAALSADKEKKIDVSKSLLE 120 Query: 131 QQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNA 190 G + I + + IN A+AG S+ S N Sbjct: 121 SSGSFAEAIEWKTGSVET------KTINPAEAGKEFSLGLAKGVSLAAGTESYMNVKVNG 174 Query: 191 MTLSVSGDDALQSFMGYDASASSNGME-VSVAAQNAQLTVNNVAIENSSNTISDALENIT 249 T V D + + + + A+++ + V+ + +T + + + Sbjct: 175 KTFGVVTDINQLNENNVYVDTENGKLTFKNSIAKSSSIKVD-YIADKKIDTFAFSEDASN 233 Query: 250 LNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADS 304 L+ + + + D + + + VN N L D K VD Sbjct: 234 FTLSKGQPSSISSIVITDKDQ-KASTYTVVNGENGLWDITDDSGKVGTVDPATGK 287 >UniRef50_A5L6M4 Putative uncharacterized protein n=2 Tax=Vibrionales RepID=A5L6M4_9GAMM Length = 440 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 99/461 (21%), Positives = 184/461 (39%), Gaps = 37/461 (8%) Query: 12 GLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLF 70 +D + + + + + S+ T+K SA G +K+AL + + +++ Sbjct: 2 NVDAVQLASNFASLDVQPFELRYTQKLSTITSKTSAIGKVKTALQSLEDKIYEFTQSGSS 61 Query: 71 SATSTTSS--TTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKL 128 ++TS+ FS + + V +A + D+ +A+ Sbjct: 62 LTQTSTSTSSDDYFSLSVDSGVNDINLDVFVQQVASNHQVVFDANSVDSNDVMASG-GVF 120 Query: 129 TIQQGGDKDPITI----DISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 ++ QGG I I + + + S N+ G + + G ++ S + Sbjct: 121 SVTQGGVTTDINIMDADTDVSGDVTYSEFVSYFNDQFDGSIQATLVKSQGSMKVLFGSEN 180 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN---VAIENSSNTI 241 G D A TLS G+D +S AQ+A + + + NSSNT Sbjct: 181 EGADAAFTLSADAAS------GWDTVVASASAAPMQTAQDAVIALGGEFGTQLTNSSNTF 234 Query: 242 SDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 ++ + L L T+ I D S +++++V+AYNS + ++LT Sbjct: 235 ESLIDGVDLTLTKSNNSGDSATTIEIGDDLSATVASLQEFVDAYNSAVTEITNLTA---- 290 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 + ++ + G L DS +R+I+ QL S++ + + L ++G+ D DGKL LD Sbjct: 291 ---SGNEDETRGVLASDSAVRSIKNQLASVIRDDYNG---TRLFELGLEID-RDGKLSLD 343 Query: 359 ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNK 417 + K +A L G G + S L +++ + G + D + ++ Sbjct: 344 SSKFESAAAT--VDFETLFTGSGG---VFEAFESKLETYIDFSNGSLNRRIDTLDNEKSR 398 Query: 418 LTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLT 458 + A R + RY QFTQL+ L + L+S S T Sbjct: 399 INDALAALDTRYETYYNRYLSQFTQLNSLSSQLDSVSGLFT 439 >UniRef50_A4JAB2 Flagellar hook-associated 2 domain protein n=80 Tax=Burkholderia RepID=A4JAB2_BURVG Length = 530 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 149/503 (29%), Positives = 251/503 (49%), Gaps = 55/503 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 IS S +D++S++ +L A+ A ++ QQ++ +SAYGTL + L+ Q Sbjct: 36 ISGSTGNSSMDVNSLVTALVNAKTAGQAAALTAQQTTDNTTISAYGTLSAGLSALQAGLK 95 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 +LS +A + T+S +A A A+AG Y+I V+ +A AQ LT++ T A Sbjct: 96 SLSNGTTLNAFTATASGNGITAAAASGAVAGSYSIDVSQVATAQVLTSKGYSATTALASG 155 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 S L++ TI + +NS+++GI AIN+A GV+A+++N +G + L + Sbjct: 156 PSALSLSV----GGASTTISLDGSNSTIAGIASAINSASNNPGVTATVVNGTDGAH-LVL 210 Query: 181 TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSN-------------------------- 214 + TG NA++++V+ +A S+ Sbjct: 211 HATATGSSNAISIAVTDSNAGDDLNKLAVQGSAGVALNGVSKATSSQLTANQSSLPQGTV 270 Query: 215 GMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVT---------TGNQTLTIT 265 + AAQ+A T++ A+ +++NT++ AL +TLNL+ + QTLTI Sbjct: 271 NWTQTTAAQDAYFTIDGTAVTSATNTVTSALSGVTLNLSAASVDSAAGTTNASPQTLTIA 330 Query: 266 QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQL 325 QDT+ AI ++V+ YN+L+ T +LT ++ S S + G LLGDSTL IQ L Sbjct: 331 QDTTSQAAAINNFVSLYNTLVTTMGTLTSFS-------SSSKTQGPLLGDSTLNMIQNAL 383 Query: 326 KSMLSNTV-SSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKT 384 S+++N V S + +L IGI+ DG L +D+ L +AL+ + + V L Sbjct: 384 ASVVANGVKSGGTTSSLGAIGISLQA-DGTLSVDSTTLNSALESNQATVAKLF---NSTN 439 Query: 385 GITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLD 444 GI + S++ +L T G I+ T+ +++ L ++ A S Y+ QFT L+ Sbjct: 440 GIAAQLNSDIAGYLGTNGPIQTRTNTLNRDLTSISTQQAALSTYQAQLTNMYQAQFTALN 499 Query: 445 VLMTSLNSTSSYLTQQFENNSNS 467 LM+++N+ S YLTQ F ++ Sbjct: 500 TLMSTMNNNSQYLTQLFGGTNSQ 522 >UniRef50_O83842 Flagellar hook-associated protein 2 n=2 Tax=Treponema pallidum RepID=FLID_TREPA Length = 722 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 27/280 (9%) Query: 208 DASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQD 267 DA + + AQ+A + V + +N+I+D + +TL+L++ T +TL++T D Sbjct: 435 DAPGGYVPVNPASQAQDAAFDFDGVHVTRGTNSITDLIPGVTLSLHERTEKTETLSVTPD 494 Query: 268 TSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV---------DAGADSQSSSNGALLGDSTL 318 + + AI ++V YN L+ + +T + ++ G+L GDSTL Sbjct: 495 VNAMKNAIIEFVAKYNRLMAEINIVTSNKSAIIDELAYLTPEEKKKETEQLGSLHGDSTL 554 Query: 319 RTIQTQLKSMLSNTV---SSSSYKTLAQIGITTDPS----------DGKLELDADKLTAA 365 ++ +L+ SN + +TLA IGI+T G LE+D +KL ++ Sbjct: 555 LMLKDRLRRNTSNAYRAGDDGASRTLAHIGISTKAHASSGINTAQLRGYLEIDEEKLHSS 614 Query: 366 LKKDASGVGALIVGDGK-----KTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK 420 L V AL D G+ T+ L +L +GI ++GV + + K Sbjct: 615 LNAQKDQVRALFGHDSDGDLLVDNGVAFTLTELLNPYLGRSGIFAIRSNGVDERIKSTEK 674 Query: 421 DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQ 460 +++ + + ++ +D + SL S + Sbjct: 675 RVETYDKQLEKKERELRHKYHTMDGALRSLQKQSDAIQNF 714 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 12/207 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 M+ + GVG+G +++ SL ++ + + + + +A ++ + A Sbjct: 1 MSDVRIPGVGAG-KYDNLIQSLMKKERIPRDNAAAKVKVYEVQNNALKDVERYARDLRDA 59 Query: 61 NTALSKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 L + + +S+ AF+ +A +T+ V +AQ + +D Sbjct: 60 VKGLYSFNNPFAEKEAHSSNERAFTVDATRDAAEQNHTLRVKDIAQGDAFLSDPLPED-- 117 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAG-VSASIINVGNGEYR 177 T G K I +S A+N ++ S I Sbjct: 118 --FRVPSGTYTFCIGEKK----ICVSWKGGHYRDFIRAVNKQGKDSLTLSEIKTSGASRA 171 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSF 204 L S TG + ++ + D Sbjct: 172 LLFRSELTGKSSRLSFEDAALDLALRL 198 >UniRef50_Q56705 Polar flagellar hook-associated protein 2 n=42 Tax=Vibrio RepID=FLIDP_VIBPA Length = 670 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 17/254 (6%) Query: 215 GMEVSVAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTG---NQTLTITQDTSK 270 GM A Q++++ ++ VA + + +N I DA+E + L L + + + D Sbjct: 428 GMTEVQAGQDSEVLLDGVAKLSSHNNVIEDAIEGVDLTLKGKSEPNKPPAEIGVEYDRQS 487 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 ++ I+++V+AYNS T +L+ D + G L GDST+R+ ++LK++ S Sbjct: 488 VRSDIENFVSAYNSFYQTSQALSSV-------DPTTGQKGPLAGDSTVRSADSRLKAVFS 540 Query: 331 NTVSSS--SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITT 388 + + + + K+L + GITT G LE++ D L L + + + G+ TG Sbjct: 541 SRIDQAPENLKSLTEFGITT-TRQGTLEINYDMLDRQLNNNFNELEKFFGGN---TGFAK 596 Query: 389 TIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMT 448 I + TG I+ +++ +L D A R++ R +FT + Sbjct: 597 RIEDAIHGITGITGSIRTREKSLTEQNYRLNDDQAALDRRMEGLEKRTHAKFTAMQDATG 656 Query: 449 SLNSTSSYLTQQFE 462 + L Sbjct: 657 KMQGQLGALMSALG 670 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 12/200 (6%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S+ +G+ G+D++S++ + A++ I N +++ A +SAYG L+ +L T + Sbjct: 2 SLGPVGMSGGMDINSMVSKIVDAERVPKQQRIDNDRTTINASISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F+ + T+ SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 62 ANFRQEKAFAVRTVETTDDNIVSATATTDAIAGKYAIDVLQLAQSHKVASDVLPEDAKF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL I G D+ I + + S L + IN A GV AS+IN G RL Sbjct: 121 ---GPGKLQISLGDDRFNIEV---RSRSKLIDVVRGINGAKDNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLSVSGD 198 + SN +G D+ + +SV + Sbjct: 174 ILASNLSGKDHQIKVSVEAE 193 >UniRef50_UPI00016C4332 Flagellar capping protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4332 Length = 666 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 110/413 (26%), Positives = 202/413 (48%), Gaps = 29/413 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 + ++ G+ +G+D ++D L + + +++Q+++ T K +A+ TL++ L Q+ Sbjct: 9 SGLNFTGLATGIDTQKVIDGLNKINQQRIDRLNSQKTALTTKQTAFVTLQAQLFDLQSKT 68 Query: 62 TALSKADLFSA---TSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 AL+++ + T+T+S +TA +A A+ G YT++V LA+ + + D Sbjct: 69 NALARSAGSAFDGRTATSSDSTAATAVAGTAAVPGTYTVNVVKLARGAQVASAGFADPNT 128 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV-GNGEYR 177 L I G + + N++L G+ D+IN A V A+++ G E + Sbjct: 129 AL---KTGTLKITVGSGTTTTV-TVGSQNNTLQGVADSINAAGGDVRATVVTDSGTSEAK 184 Query: 178 LSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN--VAIE 235 L VTS+ TG NA+++ SG + + V AAQ+AQ+TV +++ Sbjct: 185 LLVTSSKTGAANAISVDASGLTGGSGQDLF----TGGVPTVLQAAQDAQVTVGGGALSVS 240 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 + +N I++ + ++LNL T+++ DTS A A++D+V +YN++ D +S T+Y Sbjct: 241 SPTNQINNVIAGVSLNLLKEGQ-TVTVSVAADTSGAVKAVQDFVTSYNAVKDLIASQTQY 299 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGITTDPSDG 353 +S++ + G LLG+ + + L S L++ V S L+ G++ + G Sbjct: 300 -------NSETQTAGTLLGNRDVTALSDALASALTDAVPGLTGSTNRLSVAGLSFN-DSG 351 Query: 354 KLELDADKLTAALKK----DASGVGALIVGDGKKTGITTTIGSNLTSWLSTTG 402 KL D+ KLT+AL A+G L G + T + T ST G Sbjct: 352 KLVFDSSKLTSALNDPSGTAAAGFKKLFGLSGSTSNADITFLAGGTKTQSTAG 404 Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Query: 383 KTGITTTIGSNLTSWLS-TTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFT 441 G+ + + L S+L G KA TD ++ + K +D + A+ ++QF Sbjct: 580 TQGVASRLSQVLNSYLDPVAGRFKAITDTYNQQTANIDKTIVKQQAVLDDKTAQLQKQFA 639 Query: 442 QLDVLMTSLNSTSSYLTQQFENNSNS 467 ++ + +L + L + +++ Sbjct: 640 AMETAVNNLKGLQTQLASLATSTNSN 665 >UniRef50_C1P993 Flagellar hook-associated 2 domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1P993_BACCO Length = 694 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 144/357 (40%), Gaps = 42/357 (11%) Query: 145 AANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGD----DA 200 A+ +L+ + +NN+ G++ + ++T +TG N+ + +G+ + Sbjct: 343 GADKTLNDVISKVNNSNLGLTMYYDEYKD---MFTLTRKETGNFNSSSSVDNGNEIIISS 399 Query: 201 LQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ 260 + NA +N + E +SNT A+ +T L Sbjct: 400 DTDTYDFLRDTLKFSGSTEYGGTNAVFNINGLDTERTSNTF--AINGVTYTLKSKFDTPV 457 Query: 261 TLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLT-----------------KYTAVDAGAD 303 T+T++ DT IKD+V+ YNSLID S + T Sbjct: 458 TVTVSNDTDTIFKNIKDFVDQYNSLIDAVQSKLNEDRYPDYAPLTDDQRKELTDTQQDQW 517 Query: 304 SQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKT----LAQIGITTDPS---DGKLE 356 + + +G L D TL++ + ++S++ + V++++ + L+ IGITT GKLE Sbjct: 518 DKKARSGLLRNDMTLKSSLSNMRSLIYSKVNNANISSEYSQLSSIGITTTSDWLEGGKLE 577 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIK---------AA 407 +D DKL AA++ D V L G T + S T I Sbjct: 578 IDEDKLKAAIQNDPDSVELLFRASGSTTSEKGIVQRLYDSVNQTYNTIVDKAGKSTYVNT 637 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENN 464 + K +N LT + +D++D RY QFT ++ + NS +YL+ F Sbjct: 638 QFTIGKNINDLTDKISDMNDKLDKLEDRYYAQFTAMEQAIQKYNSQYTYLSSFFSQQ 694 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 102/277 (36%), Gaps = 7/277 (2%) Query: 1 MASI-SSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQT 59 M SI G+ SG+D+ SI++ + A K L + Q+ + Y TL F++ Sbjct: 1 MTSIQRITGLASGMDIDSIVEKMMTAAKQPLVKLQQQKQILEWQEEDYRTLNQKYFDFRS 60 Query: 60 ANTALSKADLFSATSTTSST-TAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDDT 117 + + + A +TTSS + +AT A NA G TI SVT LA A T Sbjct: 61 TLSNMKLTSKYRARTTTSSNESYVTATAANNASLGSTTIQSVTQLATAATRVAAAPISTD 120 Query: 118 KTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYR 177 + + L Q G I + +S A ++ S + G Sbjct: 121 SSNKVDLNQSLWKQSGNFSGSIE---WSQGGVISDTITAKGDSTDPTSVTFDLKGTLNSN 177 Query: 178 LSVTSNDTGLDNAMTLSVS-GDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIEN 236 + + G + S Q + ++ +++A + V Sbjct: 178 MPMNVKMNGKTYEVVTDPSVTLSDNQVLLTTAGGQATLKFNSNISAGTSISVEYVVDKAT 237 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQT 273 S T+S ++I L+ D+ T + T+T+ + Sbjct: 238 KSATVSSDTKSIQLDFGDIITDSFTMTVGNNNVSLSQ 274 >UniRef50_A3DHJ1 Flagellar hook-associated 2-like protein n=3 Tax=Clostridium thermocellum RepID=A3DHJ1_CLOTH Length = 838 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 88/419 (21%), Positives = 159/419 (37%), Gaps = 69/419 (16%) Query: 100 THLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN 159 ++ L + +T IA D+ + G I + + AN++LS + +AIN+ Sbjct: 432 NRISLTTKLDSLSTIFKNDLNIADPDANVVFTING--QTIDVGKTYANATLSDVMNAINS 489 Query: 160 AKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVS 219 + AGV + ++ + R + S G + + L+ + A Sbjct: 490 SSAGVKITYDSLND---RFIMESKTMGATSEIELTDTDPANGLLK------AMGLIGGTY 540 Query: 220 VAAQNAQLTVNNVA-IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDW 278 A +A+ ++ V ++ S+N + +E +T +L V++ + + D IK++ Sbjct: 541 TAGTDAEFDLDGVTGMKRSTNEFT--IEGVTYSLKGVSSEPVKIDVKADIDAVVENIKNF 598 Query: 279 VNAYNSLIDTFSSLT-----------------KYTAVDAGADSQSSSNGALLGDSTLRTI 321 VN+YN ++ +S+ + D Q + +G L DS L I Sbjct: 599 VNSYNEMLAKINSVLTEERYRDYLPLTDDQKKAMSEDDIKLWEQKAKSGLLRSDSILENI 658 Query: 322 QTQLKSMLSNTVSSSSYKTLAQIGITTDP--SDGKLELDADKLTAALKKDASGVGALIVG 379 T L+ L + V S +L QIGITT GKL +D +KL AAL + V L Sbjct: 659 VTNLRRALYDKVEGCSL-SLYQIGITTGSYQDKGKLVIDEEKLRAALTDNYDAVVQLFTQ 717 Query: 380 DGKKT------------------GITTTIGSNLTSWL-----------------STTGII 404 + T GI I L + G + Sbjct: 718 GSQYTYSEALNDPNKRAVRYKEAGIAQRIYDILQDNIRITRNANGKKGILLEKAGIAGDL 777 Query: 405 KAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 + + + + +I + Y +F ++ ++ ++NS S +LTQQF N Sbjct: 778 TEYDNLIVNEIKAKETLIDEMLVKIYKKEEYYYSKFAAMEKMLDAMNSQSMWLTQQFSN 836 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 102/296 (34%), Gaps = 26/296 (8%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 I G+ SGLD +I++ L + ++A + I ++ K Y + + L + Sbjct: 14 IRLTGISSGLDTDAIIEQLMSVERAKVDKIKQEKQILEWKRDIYRDIINKLRSITDEYFN 73 Query: 64 L--------SKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRD 115 + S++ S ++S+ + + T +A + ++I+V LA A + Sbjct: 74 VLKPKTNFTSQSAFTSFKISSSNESVVTVTANASAASKVHSITVHSLASAAKIVGT---S 130 Query: 116 DTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGE 175 I S++ T+ G + +T+D +L + SA G G+ Sbjct: 131 GLVDGIKGSNAVNTLSLQGKEINVTLDGVTKTIALEDYTSLSDLETKLESALAKAFGTGK 190 Query: 176 YRLSVTSNDTGLDNAMT--LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA 233 + TG L+ S + Y +S + + + N+ + + Sbjct: 191 IDVV----TTGGSIEFKCLLNGSTLSISDTANNYISSLGFSNGQKNFITGNSDVNSDFSL 246 Query: 234 IENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 + S + + + T ++ I+ +++ + L Sbjct: 247 YTDGS---------FKITVGNGTAQTINISDATSIDDLVAKIQQAIDSNSELSGKV 293 >UniRef50_C9LY19 Putative flagellar hook-associated protein 2 n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LY19_9FIRM Length = 570 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 82/571 (14%), Positives = 178/571 (31%), Gaps = 119/571 (20%) Query: 1 MASISSLGV-GSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTT--F 57 M G+ GSGLD+ S++ ++ + ++ + +A L + + T Sbjct: 1 MGVNGIYGLSGSGLDVESLVKMGMKGKQNQYDKMYKREMTNEYTKTALNELYNKVNTYNL 60 Query: 58 QTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRT----- 112 ++D+ + ++++S + G A +T++V LA + Sbjct: 61 SELTNYKKQSDMAAKSASSSDDKTVTVNANGAAAVMSHTVTVEKLASNSYFVSNAPITRS 120 Query: 113 -------------------------------------TRDDTKTAIATSDSKLTIQQGGD 135 D T + D+ + + Sbjct: 121 SDNPSKAMSTELADIAFKRIDKLTTPGPGGVQQYHVYYADGTDAVVNEGDTAIDMDLADK 180 Query: 136 KDP----------ITIDISAANSSLSGIRDAINNAK------------AGVSASIINVGN 173 D+ +L+ + +I NAK A +AS Sbjct: 181 DPASADDIYHVKYTFKDLVENKKTLNDLASSIQNAKRPPKGPKDVAHKANFNASY---DA 237 Query: 174 GEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSV------------- 220 S+ + + G N +++ + Q + Sbjct: 238 ATGSFSIYNKNGGASNVISVKTLDKGSTQLVNNLHFAKFDQSTNTLTNLPSFVQGTEQKF 297 Query: 221 AAQNAQLTVNNVAIENSSNTISDALENITLNL--NDVTTGNQTLTITQDTSKAQTAIKDW 278 ++ V+ N + +T N T T++++Q+ +K + Sbjct: 298 GGTAGKVKVDGREYIVDENRL--VAGGVTYNFLNKTQTGQTVTVSVSQNVDAVVDRVKKF 355 Query: 279 VNAYNSLIDTFSS------------LTK-----YTAVDAGADSQSSSNGALLGDSTLRTI 321 V +YN L+D LTK + ++ + G L ++ L + Sbjct: 356 VESYNKLLDELQKEYNTQHDKDYDPLTKEQEKGMSEEQVKRWNEKAKGGLLYHNTYLGRL 415 Query: 322 QTQLKSMLSNTVSS--SSYKTLAQIGITTDPSD--GKLELDADKLTAALKKDASGVGALI 377 ++++ ++ V++ S Y + + +GITT + G L LD DKL AL +D V + Sbjct: 416 ISKMREAVATPVAAAESKYNSASSLGITTKVGNNHGHLSLDEDKLKKALAEDPDSVYRVF 475 Query: 378 VGDGKKTGITTT---------IGSNLTSWLSTTGIIKAATD--GVSKTLNKLTKDYNAAS 426 +K + +L G D + + K Sbjct: 476 GSLDEKDDFKNSGVSMRLSKVALDSLKEISKEAGTKSDWDDASTLGNLIRSQKKKMKDFK 535 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYL 457 + +D ++ +++ ++ + +NST S + Sbjct: 536 NLLDDFQSQLYKKYDAMESALQRMNSTYSSI 566 >UniRef50_A4J775 Flagellar hook-associated 2 domain protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J775_DESRM Length = 612 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 90/460 (19%), Positives = 169/460 (36%), Gaps = 55/460 (11%) Query: 34 SNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAG 93 + + ++ A++ SAL T K L+ ++++ S + A +A+ Sbjct: 176 TQRATATEAQVQKLKLADSALAEGLTITIGDKKVALWD----STNSQYESESIAKSALKA 231 Query: 94 KYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGI 153 + L + D +A + + LT G+ +TI + + + Sbjct: 232 DVLYDIASLTTGDAVVDAIKSDIDDGTLAITGATLTKTDVGE---LTITSNEVGAEKAVT 288 Query: 154 RDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASS 213 V AS + + R + +N TG D + + + A++ Sbjct: 289 AKVAGGKSWDVRASYDSTVD---RFFLFTNKTGEDQKLEVVNNTLAQQLKL----TDAAT 341 Query: 214 NGMEVSVAAQNAQLTVNNVAIE-NSSNTISDALENITLNLNDVTTGNQTL-TITQDTSKA 271 + NA + ++ + I SN + L +T L + T+ + D Sbjct: 342 PTVNAISNGTNADVVIDGMEITEYKSNEFT--LNGVTYRLQNADPAATTIIQVQTDNDAV 399 Query: 272 QTAIKDWVNAYNSLIDTFSSLT------------------KYTAVDAGADSQSSSNGALL 313 +IK +++ YN L+DT + K T + + +G L Sbjct: 400 YNSIKSFIDEYNKLMDTLDTKLNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLR 459 Query: 314 GDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPS--DGKLELDADKLTAALKKDAS 371 D+TLR I+ +L+S + L++IGI T KLE+ D L A++ D Sbjct: 460 NDNTLRDIRDKLRSTMGE---------LSKIGIVTTSDYFSSKLEIKEDTLKKAIQNDLQ 510 Query: 372 GVGALIVGDGKKTGITTT-----IGSNLTSWLSTTGIIKAATDG---VSKTLNKLTKDYN 423 GV + G G + S +++ + G D + K ++ + D + Sbjct: 511 GVMDVFTGSGDGVDGVGQKLSDHVSSGISTIIEKAGANGNKADDDSFLGKRIDNVNDDID 570 Query: 424 AASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 DR+ RY QF+ ++ + LN SS+L QQF Sbjct: 571 NLEDRLKQIEDRYWRQFSAMEAAINKLNQQSSWLMQQFGG 610 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 113/293 (38%), Gaps = 19/293 (6%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA- 60 +++ G+ SG+D+ I+ L Q + + ++ F + Y T+ S L +F+ Sbjct: 3 SNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRDNQ 62 Query: 61 NTALSKADLFSAT-STTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 + + A +T+S+ AT + A G + I+V +LA+ +LT+ T+ Sbjct: 63 VFQMKLQSTYLARNATSSNENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISATEN 122 Query: 120 AIATSDSKLTIQQGGDKDPIT---IDISAANSSLSGIRDAINN-AKAGVS------ASII 169 +D T + + S+ + IN + AGVS A+ Sbjct: 123 LATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLVGRINQHSSAGVSLNTTQRATAT 182 Query: 170 NVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTV 229 + +L+ ++ GL + + S + + ++ V A LT Sbjct: 183 EAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASLTT 242 Query: 230 NNVAIENSSNTISD---ALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWV 279 + ++ + I D A+ TL DV LTIT + A+ A+ V Sbjct: 243 GDAVVDAIKSDIDDGTLAITGATLTKTDVGE----LTITSNEVGAEKAVTAKV 291 >UniRef50_B5YGA9 Flagellar hook-associated protein 2 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGA9_THEYD Length = 440 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 101/470 (21%), Positives = 203/470 (43%), Gaps = 40/470 (8%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA 60 MA + G+ LD +I+ +L ++ LT ++ Q++ AK+S+ L SAL Q+ Sbjct: 1 MADLYVSGLTGALDTETIISNLLKIKQQPLTQLTQQKALTQAKVSSLTNLYSALNGMQSF 60 Query: 61 NTALSKADLF-SATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 T L+ + +F + +T+S+T+ +AT + +++V LAQ + + Sbjct: 61 FTNLNISSIFSTKKATSSNTSVLTATATSDTPNLTMSLTVNKLAQTEMRASTDGMSSLTD 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDIS-AANSSLSGIRDAINNAKAGVSASIINVGNGEYRL 178 +S + + + +T D++ +A +L + ++IN+A+ + ASI G YRL Sbjct: 121 TFTSSGTITLKYWKDNSNFVTYDVNYSAGQTLQDLVNSINSAQNDIKASIYYTGT-SYRL 179 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVA--IEN 236 +T +D + T + N +E AQNA LT+ + + + Sbjct: 180 LLTESD---ASNSTKETDTASSSYVIEASGLPTELNSLETLQNAQNASLTIGSSTTPVTS 236 Query: 237 SSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYT 296 +SNT S+ + + + + D TG+ T+TI++D S+ + + +V+ YNS+I +S+T Sbjct: 237 ASNTFSNIVTGLDITVKD--TGSATVTISEDYSQIDSTLNSFVSNYNSIISLINSMT--- 291 Query: 297 AVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLE 356 GDST+ TI+T + ML+ +++ I +DG + Sbjct: 292 ----------GKGAQFQGDSTITTIKTGMVRMLNPLINAGL--------INYSDTDGTIS 333 Query: 357 LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 +++D L++ + + ++ T S TG I + Sbjct: 334 INSDTLSSLKSSNPEKLNEILT---------TLKDSFTNQLNGWTGAINTYKKIGENQIT 384 Query: 417 KLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 + + + + ++++ QL+ + +N SS L + S Sbjct: 385 NINNKITNLQEYLTKYEEQLRKEYAQLESFINEMNQISSRLEDFMTSLSK 434 >UniRef50_C9NQ91 Flagellar hook-associated protein FliD n=2 Tax=Vibrio RepID=C9NQ91_9VIBR Length = 674 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 20/277 (7%) Query: 193 LSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI-SDALENITLN 251 + + D + +DA GM AAQ++++ ++ VA +S N I DA+E + L Sbjct: 412 IDQAQADLKSAQESFDA---YRGMSQVQAAQDSKVLLDGVAQLSSDNNIIEDAIEGVDLT 468 Query: 252 LNDVTT---GNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSS 308 L + + I D + I+ +V+AYN L+ G D ++ + Sbjct: 469 LKGRSERGKTPSEIDIEYDRQGVRDDIEQFVSAYNQFYQVSQELS-------GVDPRTGA 521 Query: 309 NGALLGDSTLRTIQTQLKSMLSNTVSSS--SYKTLAQIGITTDPSDGKLELDADKLTAAL 366 G L GDS +R+ ++LKS+ S+ V + KTL + GITT G LE++ D L L Sbjct: 522 AGPLAGDSVVRSADSRLKSVFSSRVEPAPEDLKTLTEFGITT-TRQGTLEINYDMLDRQL 580 Query: 367 KKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAAS 426 + + + G+ G + + TG I+ + + +L D + Sbjct: 581 NNNFNKLEDFFGGN---QGFAKKVEDAIQGITGVTGSIRTRERSMVEQNYRLDDDQASLD 637 Query: 427 DRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFEN 463 R+D+ R +FT + + + S + + Sbjct: 638 RRMDSLEKRTHAKFTAMQDATSKMQSQLAGMMNALGG 674 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%) Query: 3 SISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 S +G+ SG+D+++++ + +++ I N++ + +SAYG L+ +L T + Sbjct: 2 SFGPVGMNSGMDINAMVSKIVDSERVPKQQRIDNERGKIDSSISAYGRLRESLDTMKNLM 61 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + + F+A ++ T SAT AIAG+Y I V LAQ+ + + +D K Sbjct: 62 ASFRQEKAFAARKVESTDDTVVSATATTEAIAGRYAIDVLQLAQSHKIASDVLPEDAKF- 120 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRL 178 KL I G K + + NS L I IN + GV AS+IN G RL Sbjct: 121 ---GPGKLQISLGEKKFTVEVQ---ENSKLVDIVRGINGSKTNPGVRASVINDVEGP-RL 173 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQ 202 V S+++G NA+ LSV Sbjct: 174 IVASSNSGEQNALKLSVESAPDNL 197 >UniRef50_D2L9L8 Flagellar hook-associated protein 2 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9L8_9DELT Length = 564 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 31/429 (7%) Query: 2 ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN 61 I+ G+G+G D +S++ L ++ +T + + S+T K +A+ L S + + +T Sbjct: 16 GQITYTGLGNGTDFNSLITKLVQVEQGRITTLQTWKQSWTDKQTAFQKLNSEMLSLKTTL 75 Query: 62 TALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA 120 + F + +T ++ +T + TT NA G ++I+V LA A+ ++++T Sbjct: 76 EGMDSVGEFLSKTTDSTDSTILAVTTGANADNGSHSITVNRLATAKAMSSKTGYTSATED 135 Query: 121 IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRL 178 I S S+++ + I AN +L+ + INN GV ASI+N G+ +Y L Sbjct: 136 INPSSSEVSFNYTYKGVTYSNAI-GANCTLTDLASIINNDPKNPGVKASIVNDGS-KYYL 193 Query: 179 SVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSS 238 + DTG ++T+ + + L F D + +N + + T V I + Sbjct: 194 QLRGMDTGDSASLTI--ANNSGLSGFTNADFNTITNNASAQLK-LDGWPTDAGVWITRET 250 Query: 239 NTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 N+++D L +TLNL T + T T DT+ + I+ +V N++ LTK+ Sbjct: 251 NSVTDLLSGLTLNLKSTGTVDV--TTTTDTATVKKNIQTFVEQMNTVRTLLQDLTKF--- 305 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNT-----VSSSSYKTLAQIGITTDPSDG 353 DS + L G+ L+ I T LK+ ++ ++ Y TLAQ+GI TD S+G Sbjct: 306 ----DSTTQQASILTGNYGLQLIDTNLKTAVAGKGIGFDYTTDKYSTLAQLGIATDASEG 361 Query: 354 KLE-----LDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAAT 408 +D D L L +A V L + +T S + +G K T Sbjct: 362 STTEGLLVIDDDVLDDILSSNADAVAQLFSAQY----VGSTDSSEFSISSYISGTTKCGT 417 Query: 409 DGVSKTLNK 417 ++ T + Sbjct: 418 YDLAYTTDS 426 >UniRef50_C8PMN7 Flagellar hook-associated protein FliD n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMN7_9SPIO Length = 659 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 125/310 (40%), Gaps = 32/310 (10%) Query: 183 NDTGLDNAMTLSVSGDDALQSFMGYD-----ASASSNGMEVSVAAQNAQLTVNNVAIENS 237 ++ G +T+ + D S A+ + AQ A LT + ++ S Sbjct: 340 SEYGDITGITVHNNNTDKTVSLAQIKVYDPKATGEYIPVNPVSQAQEASLTFEGIPVKRS 399 Query: 238 SNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTA 297 +N I D + +TL L D T ++++I D A+ AI ++V YN L+ + +T Sbjct: 400 TNKIDDLIPGVTLQLEDKTDKPESISIKPDPQPAKDAIIEFVAKYNRLLAEINIVTSNQQ 459 Query: 298 VDAGA-----DSQSSSN----GALLGDSTLRTIQTQLKSMLSNTV---SSSSYKTLAQIG 345 D + + GAL GD+TL +++ L+ +++N + + +TL+QIG Sbjct: 460 AVIDEIEYFTDDERKTAEENLGALFGDTTLSSLKNNLRQIVANVYRRNTDTPIRTLSQIG 519 Query: 346 ITTDPSD----------GKLELDADKLTAALKKDASGVGALIVGDGK-----KTGITTTI 390 I+T G LE+D KL ALK V L D G+ + Sbjct: 520 ISTKSDTSSALNEARLRGYLEIDEKKLDEALKNSIEDVRYLFGYDTDNDVLIDDGVAYQV 579 Query: 391 GSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSL 450 + ++ GI T+G++ + ++ + ++++ +D + +L Sbjct: 580 FKQIDPYVQRGGIFSTRTNGLAARIKTSKDKIARYDQALEKKEQELRQKYGDMDGSLRNL 639 Query: 451 NSTSSYLTQQ 460 S + Sbjct: 640 QKQSDMINNF 649 Score = 97.7 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 12/203 (5%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 ++ G+G+G +++++L ++A + + + + + + T + Sbjct: 1 MNIPGIGAG-KYDNLIETLMKKERAPRDSAAEDLKKYEQQNAIWRKINQFSTEIREKTRD 59 Query: 64 LSKAD--LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAI 121 L + T +S+ A +AT + +A + IS+ +AQA + + D Sbjct: 60 LYSFNNPFVEKTVASSNERAVTATASRDAREQTFKISINQIAQADSFLSNEVSKD----F 115 Query: 122 ATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGV-SASIINVGNGEYRLSV 180 T G K + ++ DA+N V S I G L Sbjct: 116 QVPKGLYTFTVGEKK----LSVNWQGGKYRSFIDAVNKKGKDVIRISEIKTSPGAVSLLF 171 Query: 181 TSNDTGLDNAMTLSVSGDDALQS 203 S TG N + S Sbjct: 172 ESQLTGEANRLEFSDDALSFALE 194 >UniRef50_C8WBS7 Flagellar hook-associated 2 domain protein n=3 Tax=Zymomonas mobilis RepID=C8WBS7_ZYMMN Length = 564 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 126/413 (30%), Positives = 205/413 (49%), Gaps = 23/413 (5%) Query: 8 GVGSGLDLSSILDSLTAAQKATLTP-ISNQQSSFTAKLSAYGTLKSALTTFQTANTALSK 66 G GSGLD +++++ L AA + + + Q ++ + ++SA GT+ S L+ T+ ++L Sbjct: 39 GAGSGLDTTNLVNELVAASQDPIQQQLDTQSTTNSNRISALGTITSDLSALNTSLSSLVS 98 Query: 67 ADLFSATSTTSSTTAFSATTAGNA--IAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATS 124 + S T+ +AT + +I V LAQAQ+++T Sbjct: 99 GGSLLTQPSVSDTSVLTATAESGSRLSNLSGSIKVEQLAQAQSISTTAYDSSKTFDA--- 155 Query: 125 DSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSND 184 LT ++ID A SSLS + AIN +AG +A+++ +G+ +L +T Sbjct: 156 -GTLTFTNSYGSATVSID---AGSSLSDVAKAINKKQAGFTATVLTQSSGQQQLMITGM- 210 Query: 185 TGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDA 244 TG ++S SG S + YD SA+S M V+VAAQ+A+L+ NNV + SSNT D Sbjct: 211 TGDAYGFSVSGSGGA---SDINYDKSANSGSMTVNVAAQDAKLSYNNVEVTRSSNTFDDL 267 Query: 245 LENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADS 304 + +++NL ++ TL T+ TS + A+ ++V+AYN L S+ T Sbjct: 268 ISGVSINLKSASSQPVTLGSTRQTSNVRQAVLNFVDAYNELYSDISTNTAIGTS------ 321 Query: 305 QSSSNGALLGDSTLRTIQTQLKSMLSNTVSS-SSYKTLAQIGITTDPSDGKLELDADKLT 363 SSS GAL D+ +RT+++ L SM++ +SS SY TL +IG++ + DG L D +L Sbjct: 322 -SSSAGALANDAGVRTLKSSLNSMINQKLSSTGSYSTLGEIGVSIN-RDGTLTADTTQLD 379 Query: 364 AALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLN 416 AL D V AL + +I S++ T + T S + Sbjct: 380 TALANDPDSVEALFNPTQSTSNSAVSITSSIGKVTPGTYKLSDVTYDESGNIT 432 >UniRef50_B9KJE9 Flagellar hook-associated 2 domain protein n=4 Tax=Rhodobacter sphaeroides RepID=B9KJE9_RHOSK Length = 551 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 30/409 (7%) Query: 10 GSGLDLSSILDSLTAAQKA-TLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKAD 68 GSGL++ + SL A A T + + +SA G +++ + A ++++ Sbjct: 13 GSGLNIRELAKSLVTADTAVKRTTAEKKIEATEVSISALGKVRAQFQSLSEAIGTVTQSS 72 Query: 69 LFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT----- 123 + ATS++ S + S T I V +AQ Q L A Sbjct: 73 VLKATSSS-SALSISVTDRTLVSEQVTEIEVLQVAQRQVLEFGGFPAADAALGAGRITID 131 Query: 124 ---------SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 S + Q +ID+ ++L + A+++ GV A +++ G+G Sbjct: 132 FGVWYAPEGSQEATSFAQNPALASSSIDVGEG-ATLQDLATALSDI-PGVVARVLDKGDG 189 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 + L V S + G +A+ +V+ A +D + ++N +A +A LTV+ + + Sbjct: 190 TFSLGVVS-EPGAGSALRFTVAEGTAGNGLARFD-TTATNLDAQVQSATDALLTVDGITV 247 Query: 235 ENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTK 294 SN I+D + TL ++ T+G +++++D++ A+ A+ V N+ + +T Sbjct: 248 ARGSNEITDLVPGATLTVSGKTSGPAVVSVSRDSALAEAAMAYLVEELNATLKIMRDVTV 307 Query: 295 YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYK--TLAQIGITTDPSD 352 + G L+GDST+ ++ Q S+LS ++ K L+Q+G++T+ D Sbjct: 308 RSVDGTA-------AGDLVGDSTVEALKRQFSSLLSGPLTGHGEKPVYLSQLGVSTN-RD 359 Query: 353 GKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 G L D + A A+ T+ LTS ++ Sbjct: 360 GSLSFDEEAFQKAFAARPEIFDAMFTNSFSSPTEGVTVTGALTSKAASG 408 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 55/419 (13%), Positives = 124/419 (29%), Gaps = 29/419 (6%) Query: 56 TFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTH-LAQAQTLTTRTTR 114 +++ + + +T S + G +++ V L Sbjct: 152 ALASSSIDVGEGATLQDLATALSDIPGVVARVLDKGDGTFSLGVVSEPGAGSALRFTVAE 211 Query: 115 DDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNG 174 +A D+ T + ++ +++ + I + G + ++ +G Sbjct: 212 GTAGNGLARFDTTATNLDAQVQSATDALLTVDGITVARGSNEITDLVPGATLTVSGKTSG 271 Query: 175 EYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAI 234 +SV+ + L+ + L + + SV A V + + Sbjct: 272 PAVVSVSRDS-------ALAEAAMAYLVEELNATLKIMRDVTVRSVDGTAAGDLVGDSTV 324 Query: 235 ENSSNTISDALENITLNLNDVTTGNQ---TLTITQDTSKA----QTAIKDWVNAYNSLID 287 E S L L L ++ + + + A + A + D Sbjct: 325 EALKRQFSSLLSG---PLTGHGEKPVYLSQLGVSTNRDGSLSFDEEAFQKAFAARPEIFD 381 Query: 288 TFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGIT 347 + + + + + + ++ A GD R + + V+ + T G Sbjct: 382 AMFTNSFSSPTEGVTVTGALTSKAASGDYAFR------RDPGTGAVTVAGAATFGLPGTD 435 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAA 407 L D L + D + + + S L G I Sbjct: 436 GTSKYIVLSGDMAGLIVTARDDVADATLRFGRS-----FASQLQSLLDGATEAEGSIAKR 490 Query: 408 TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSN 466 D + K + + A R +RY QFT ++ ++ + ST +YL ++ + Sbjct: 491 EDQIGKLAAEQAEVIEALDLRATKLESRYLAQFTAMEQAVSRMKSTGTYLENLVKSWNK 549 >UniRef50_B0RKG2 Flagellar hook-associated protein 2 n=1 Tax=Herbaspirillum seropedicae RepID=B0RKG2_HERSE Length = 676 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 115/426 (26%), Positives = 191/426 (44%), Gaps = 26/426 (6%) Query: 50 LKSALTTFQTANTALSKADLFSATSTTSSTT----AFSATTAGNAIAGKYTISVTHLAQA 105 ++ + A++ +D S + T +A AG+A + T + A Sbjct: 268 IQPKTNSLAGVRDAINASDAGVNASIVNDGTNDHLVLTAKDAGSANTLRVTGTGNFAAFN 327 Query: 106 QTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSS--LSGIRDAINNAKAG 163 + T T S L +Q G I + + L+ + AIN+A G Sbjct: 328 FDPSGTITTTGVATNQTYSSGSLALQVGSKSFTINPTDLDGSGAIGLNDVMKAINDANTG 387 Query: 164 VSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQ 223 V+ASI N G+ + L +T + T D + G + + + M AQ Sbjct: 388 VTASITNDGS-KDHLVLTPSGT------------DAVKLTGAGDYSDLAGSSMGQLAKAQ 434 Query: 224 NAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQT--LTITQDTSKAQTAIKDWVNA 281 +A+LTV+ V + ++SN +++ + +TLNL+ VTT L+I DTS TA +V A Sbjct: 435 DAKLTVDGVTVTSTSNKVTNVISGVTLNLSKVTTSADNFSLSINNDTSGLSTAANTFVTA 494 Query: 282 YNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTL 341 YN+L ++LTK T Q+S+ L +S++ + Q+++ + + + L Sbjct: 495 YNTLAKAVANLTKQTPSTTK--GQASTGSPLASESSVLALMGQVRNTMLGALGDNGATNL 552 Query: 342 AQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT 401 +QIGI+ DG L LDA KLT A KD G+ L G+ + + L + Sbjct: 553 SQIGISFQ-KDGTLALDATKLTNAANKDFDGITQLFT--SATNGVVPKLQKLMDGILGES 609 Query: 402 GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQF 461 G++ + T G+ +L +T AA+ R+ Y QF +L+V + ++ S SYLTQQ Sbjct: 610 GVLASKTKGLQDSLKIVTDQQTAANARLQDLKDTYTNQFNRLNVTLATMQSRQSYLTQQL 669 Query: 462 ENNSNS 467 S S Sbjct: 670 AKLSKS 675 Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 10/222 (4%) Query: 5 SSLGVGSGLDLSSILDSLTAAQ-KATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTA 63 + LD++++++ L + + K+ LTP+ N++SSF +SAYG+LK+A T++Q+A Sbjct: 7 TISTSAGPLDVATLVNQLISVESKSRLTPLKNKESSFNTLISAYGSLKNAFTSYQSALKT 66 Query: 64 LSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIAT 123 L+ A + +T S+ + T A T T + AQ L + Sbjct: 67 LTAASFSAQKTTLSNAGTGTNLTTDPFTADTNTDESTKV-LAQKLQSAGFTAGQTFNAGD 125 Query: 124 SDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSN 183 ++ + T AN++L+G+RDAIN AKAGV+ASI G+G++ L + SN Sbjct: 126 -----SVAIKVGTNQPTFITLQANATLAGVRDAINAAKAGVTASITTDGSGDH-LVLESN 179 Query: 184 DTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNA 225 G N + ++ +++L S +S S+ + A ++A Sbjct: 180 TGGTANTIKITA--NNSLSSLAYDPSSNVSSTVTQIQAPRDA 219 >UniRef50_B8DI75 Flagellar hook-associated protein n=20 Tax=Listeria RepID=B8DI75_LISMH Length = 429 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 106/469 (22%), Positives = 203/469 (43%), Gaps = 47/469 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATL----TPISNQQSSFTAKLSAYGTLKSALTTFQT 59 + S S +D + + QKA+L TP NQ SS+ +++ Y +LK+AL+ Sbjct: 1 MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESLK 60 Query: 60 ANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKT 119 ++ + + + +T+S+ T+F+ ++ +++ G Y+I V +LA A T + K Sbjct: 61 TMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKAVPDIEAKI 120 Query: 120 AIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLS 179 ++ TI+ G + + A+SS+ + + IN+A A V N+ + Sbjct: 121 GVSG-----TIKINGKEIKV-----DADSSMKNVMNTINSAGAKV-----NIYTLGENMV 165 Query: 180 VTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSN 239 VT+ TG++N++ +A +AA++A+L +N + +++N Sbjct: 166 VTAATTGVENSIKYEGDSTV-------LEALGLVQNSPDHLAAEDAKLRINGATVTSATN 218 Query: 240 TISDALENITLNLNDVTTGNQTLTIT-QDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAV 298 +++ + +T+NL TTG + LTI Q KA + I +VN YN+L T + T Sbjct: 219 KVTNYIPGVTINLKKETTGAEKLTIQDQSDEKAASMITSFVNTYNALTSTMKTYT----- 273 Query: 299 DAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELD 358 L + L ++ + TL GI+ D +G L++D Sbjct: 274 --------GKGTILQASAADLEANRALNNVFQHKKDG---NTLFDFGISVD-KEGVLKVD 321 Query: 359 ADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKL 418 + + +D S V G G I + +L +TG I T ++ +NKL Sbjct: 322 ETAMKKMVAEDPSAVERFFFGIGG---IGDELYQSLNKTFGSTGFISDETTSMTNEINKL 378 Query: 419 TKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNS 467 + R D + +Q+ + +M ++ S + L + ++S Sbjct: 379 NLKLTDITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDALIDGMNSS 427 >UniRef50_D1TKQ6 Flagellar hook-associated 2 domain-containing protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKQ6_9BURK Length = 523 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 161/498 (32%), Positives = 250/498 (50%), Gaps = 50/498 (10%) Query: 4 ISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQTANT 62 I S S +D SS++ +L ++ A I+ +Q++ +SAYGTL + L+ Q A Sbjct: 34 IISGSTNSSMDTSSLVTALVNSKTAGQAATIAAEQTADNTLISAYGTLSAGLSALQAAIL 93 Query: 63 ALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIA 122 LS + +T S T +AT A+AG Y+++V +A +Q LT+ T A Sbjct: 94 PLSDGQTLNTFKSTLSGTGVTATATTGAVAGSYSLNVAQVATSQVLTSAGYNASTNLASG 153 Query: 123 TSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEYRLSV 180 + LT+ TI ++++NS+++GI AIN+A GV+A+++ +G + L + Sbjct: 154 AATMTLTVN----GKSSTISLNSSNSTIAGIASAINSANDNPGVTATVVTGADGAH-LVL 208 Query: 181 TSNDTGLDNAMTLS-----------------------------VSGDDALQSFMGYDASA 211 SN TG +++S + D + ++ ++ Sbjct: 209 QSNSTGASGGISISVSDSTSSDDLNKLAVATTAGKSISSASDLTATDSSGNTYNPSQSTI 268 Query: 212 SSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQ-TLTITQDTSK 270 S +G + AAQ++ T+ V + +S+N + AL +TLNL G TLTI QDTS Sbjct: 269 SGSGWTQTQAAQDSYFTLGGVGVSSSTNAVKTALSGVTLNLTSAAVGTTQTLTIAQDTSA 328 Query: 271 AQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 QTAI ++V YN+L+ T SLT Y + S+S G LLGDSTL IQ QL ++ Sbjct: 329 EQTAIDNFVTVYNTLVTTMGSLTSY-------NKNSTSQGVLLGDSTLSVIQNQLAKIVG 381 Query: 331 NTVSSSSYK-TLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTT 389 + V S S K TLA IGIT DG L +D KL AL+ + S V ++ TGI Sbjct: 382 SGVGSGSTKTTLAAIGITLQS-DGTLSVDDTKLGDALQNNQSAVASVF---NPTTGIAAQ 437 Query: 390 IGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTS 449 + ++T++ S TGIIK TD ++ L L + ++Y QFT LD LM + Sbjct: 438 LDDSITNYTSPTGIIKNRTDAINSDLASLANQQTTLTAWQAQLTSQYTAQFTALDKLMAT 497 Query: 450 LNSTSSYLTQQFENNSNS 467 +N+ S YLTQ F +++ Sbjct: 498 MNNNSQYLTQLFGGTNSA 515 >UniRef50_Q7MIM7 Flagellar hook-associated protein FlaH n=13 Tax=Vibrionales RepID=Q7MIM7_VIBVY Length = 701 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 17/257 (6%) Query: 212 SSNGMEVSVAAQNAQLTVNNVAIENSSNTI-SDALENITLNLNDVTT---GNQTLTITQD 267 + +GM Q+A + ++ VA +S+N I DA+E + L L VT + + D Sbjct: 456 TYSGMTEVQQGQDAMVVLDGVAQLSSNNNIIEDAIEGVDLALKGVTPKNKAPAEIGVEYD 515 Query: 268 TSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKS 327 + I+ +V AYN T +L+ G D + G L GDST+R ++LKS Sbjct: 516 RQSVRDDIETFVAAYNQFYQTSKALS-------GVDPTTGQKGPLAGDSTVRNADSRLKS 568 Query: 328 MLSNTVSSS--SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTG 385 + S + + + K+L + GITT G LE++ D L L + + + G+ TG Sbjct: 569 VFSTRIEKAPENLKSLTEFGITT-TRQGTLEINYDMLDRQLNNNFNRLEEFFGGN---TG 624 Query: 386 ITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDV 445 + + TG I+ +S+ +L + A R+ + R +FT + Sbjct: 625 FAKRVEDAIHGITGVTGSIRTREKSLSEQNYRLVDEQAALDRRMGSLEQRTHSKFTAMQD 684 Query: 446 LMTSLNSTSSYLTQQFE 462 + + L Sbjct: 685 ATSKMQGQLGALMNALG 701 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 1 MASISSLGVGSGLDLSSILDSLTAAQKATLT-PISNQQSSFTAKLSAYGTLKSALTTFQT 59 M S+ LG+ G+D++S++ + A++ I N+++ + +SAYG L+ +L T + Sbjct: 1 MMSLGPLGMSGGMDINSMVSKVVDAERVPKQQRIDNERARIDSSISAYGRLRESLDTMKN 60 Query: 60 ANTALSKADLFSATST-TSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + F+ T+ + SAT +AIAGKY I V LAQ+ + + +D K Sbjct: 61 LMANFRQEKAFAVRKVDTTDDSVVSATATTDAIAGKYAIDVLQLAQSHKVASDVLAEDDK 120 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA--KAGVSASIINVGNGEY 176 KL I G + + +A+S L + IN A GV ASIIN G Sbjct: 121 F----GPGKLQISLGDKSFDVNV---SADSKLVDVVRGINGASKNLGVRASIINDVEGP- 172 Query: 177 RLSVTSNDTGLDNAMTLSVSGD 198 RL V S +G +N + + V + Sbjct: 173 RLIVASTVSGKENQIRIHVDAE 194 >UniRef50_A7GYT4 SMR-type multidrug efflux transporter n=2 Tax=Campylobacter RepID=A7GYT4_CAMC5 Length = 591 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 86/406 (21%), Positives = 168/406 (41%), Gaps = 40/406 (9%) Query: 2 ASISSLGVGSG--LDLSSILDSLTAA-QKATLTPISNQQSSFTAKLSAYGTLKSALTTFQ 58 SI++LG G+ +++ L A ++A + PI+++ + LK+ ++ Sbjct: 4 GSITNLGFGTNNSALNDELVNKLKKADEEAQIKPITSRIEKNEIRQKDLAALKTLVSNVN 63 Query: 59 TANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTK 118 + +L+ L+ +S+ TA S T A + + V +AQ T + T Sbjct: 64 VSAKSLASETLYLKRQVSSTGTAASITAASGVSIQSFDLDVKQVAQRDTYQSSKFYSSTS 123 Query: 119 TAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINN-AKAGVSASIINV-GNGEY 176 T + ++ G+K I + S ++ I D IN + + A I+NV G+ Y Sbjct: 124 LLGLTQNGSFDVEINGNKYSIGVTKS---TTYQDIVDKINEVSGGNLQARILNVGGSNPY 180 Query: 177 RLSVTSNDTGL--------------------DNAMTLSVSGDDALQSFMGYDASASSNGM 216 ++ + S DTG N + ++ + + + G S+ Sbjct: 181 QIMLQSADTGAKQTIKFSNDTAGVLEKLGWDSNQIPVTDDSGNPVYNSDGTQKFTSNLEK 240 Query: 217 EVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK 276 ++AQ+A N V + + NTI D +T+ L + TG + +I QDT+ A++ Sbjct: 241 NKLMSAQDAIFNYNGVNVTRTKNTIDDLRPGVTITLKE--TGKSSFSIGQDTTDVAKAVE 298 Query: 277 DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSS 336 +++ YN ++ T Y + +G+ G S + +I++ + + + Sbjct: 299 EFIKDYNLMVTNLGIATNY--------DEEKGSGSFQGRSEITSIRSTISRLTTGQDDEG 350 Query: 337 SYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGK 382 K L++ GI TD + D + L+ AL + V +G K Sbjct: 351 --KALSKFGIITDKDGKLMLDDKNTLSKALSSNLEEVQKFFMGSSK 394 Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 3/151 (1%) Query: 320 TIQTQLKSMLSNTVSSSSYKTLAQIGIT-TDPSDGKLELDADKLTAALKKDASGVGALIV 378 +Q + S VS+S + +I + +D + +++ DA L L + V A+ Sbjct: 441 ALQQAINSAGIEGVSASLDSSGERIVLKRSDGQNIEIKGDASALNQ-LGMSTATVNAVTT 499 Query: 379 GD-GKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYK 437 G T +++ + + G + + + LT D +D + K Sbjct: 500 KTAGLFTNLSSKLEDIVGIDNRKDGTLTVLAKQLKEEGESLTTDKENTQKLLDEKYNTMK 559 Query: 438 EQFTQLDVLMTSLNSTSSYLTQQFENNSNSK 468 ++F + + ++ +L + S L Q E NSK Sbjct: 560 DRFIKYNSIIANLENQFSTLKQMIEQEMNSK 590 >UniRef50_UPI0001C3576C flagellar capping protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3576C Length = 943 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 180/447 (40%), Gaps = 43/447 (9%) Query: 52 SALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTR 111 + + AL +SA + + + +G+ GK + + ++ Sbjct: 505 TESSKISELVNALGAGAAYSADGRIEISGNTTISISGDNADGKAALKKLFGVENISIAPV 564 Query: 112 TTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINV 171 + A + S + + G+K+ + S++ L ++A+ A G+ Sbjct: 565 NGSFTSNAASSIPGSGIIYVKAGNKNIMVNMASSSPPDLDAFKNAVKEATGGIVEF---- 620 Query: 172 GNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNN 231 NG+ +L++T + T + + + F + + S A QNA+LTV+ Sbjct: 621 -NGDNKLTITGGTNIATISGTDAATSQFIKELFGTDNYTFSPQMTAQITAGQNAKLTVDG 679 Query: 232 VAIENSSNTISDALENITLNLNDVT---TGNQTLTITQDTSKAQTAIKDWVNAYNSLIDT 288 V +E ++NT L+ IT+ L T +L ++DT K ++K +V YN+LI+ Sbjct: 680 VTMERNTNTFE--LDGITMELTGTTGAGDPPISLITSRDTDKIIDSLKSFVEDYNTLIEE 737 Query: 289 FSSLTK------------------YTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLS 330 +S + + + S G L DS + + + ++ +L Sbjct: 738 LNSYVSEEATYKKYAPLTDAQKKEMSDREIELWEEKSKKGLLHNDSNVSSFLSDMRMVLY 797 Query: 331 NTVSSSSYKTLAQIGITTDP---SDGKLELDADKLTAALKKDASGVGALIVG--DGKKTG 385 ++V + L IGI T +GKL +D D L + + +A + L G Sbjct: 798 SSVEDAGL-ALYDIGIETSDNWRDNGKLVIDEDTLKSMVATNADNIRKLFTDKEQGVAVK 856 Query: 386 ITTTIGSNLTSWLSTTGIIKA---------ATDGVSKTLNKLTKDYNAASDRIDAQVARY 436 + I + G + ++ + + ++++ + + + + + RY Sbjct: 857 LQQAIREAANVSSGSPGSMVRYAGTKDVLITSNTIYDEMKRISETLSKLNTKYELERTRY 916 Query: 437 KEQFTQLDVLMTSLNSTSSYLTQQFEN 463 +QF ++ ++++NS SS+LTQQF + Sbjct: 917 WKQFNAMEQAISNMNSQSSWLTQQFSS 943 Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 20/172 (11%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTAN---- 61 G+ SG+D S++ S+ + ++ + + + K Y +L + + TF Sbjct: 19 IAGLASGMDTESMVQSMLSGTQSKIDKQTGLKQQLEWKQDIYRSLITKINTFSDKYFSYY 78 Query: 62 ----TALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTI-SVTHLAQAQTLTTRTTRDD 116 T L + L++ + SS++ T+ I S+ LA A T+ T T Sbjct: 79 GSGDTNLLSSSLYNTMTGVSSSSNIKVTSVSGNAVSSMKIDSIERLATACTVKTAGTVTG 138 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSL--------SGIRDAINNA 160 T S+ T GD + + N ++ + IN A Sbjct: 139 TPVGSGADMSQFT---NGDTYSFSATLDGVNRTITFTAGANDADTIKNINQA 187 >UniRef50_Q0F276 Flagellar hook-associated 2-like protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F276_9PROT Length = 785 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 193/403 (47%), Gaps = 27/403 (6%) Query: 6 SLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALS 65 G +G D +D L +K ++ + +Q + TA+ A + +A++ ++ ++ Sbjct: 11 ISGQVAGFDAQGAVDGLLGVRKFEISQLQKKQDTITARQDALLQINNAVSGLRSTAIGMA 70 Query: 66 KADLFSATSTTSSTTAFS--------ATTAGNAIAGKYTISVTHLAQAQTLTTR-TTRDD 116 + F + + ++++ + + AG++ I V+ +AQA+ +++ +D Sbjct: 71 DSTAFFGYTASLASSSSAVSASSLLDVSGTSGVSAGQHNIIVSQVAQAERISSSVAVKDS 130 Query: 117 TKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAIN-----NAKAGVSASIINV 171 T TA+A++ + + + T+ +S ++ SL+ I IN + GVSAS++ V Sbjct: 131 TGTAVASASTVMNLSGSFQLAGSTVTVSPSD-SLNDIAANINQLNTGASATGVSASVMKV 189 Query: 172 GNGEYRLSVTSNDTGLDN-AMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVN 230 G ++RL + S+ TG ++ + + + A+ +N + AQ+AQ++++ Sbjct: 190 GTNDFRLILASDTTGATGFTLSGANLDAAGPLAALQLGATGQTNAYQSLQLAQDAQISID 249 Query: 231 NVAIENSSNTISDALENITLNLNDVTTG-NQTLTITQDTSKAQTAIKDWVNAYNSLIDTF 289 +++ S+N I+DAL +TL+L ++ I D + ++ +V+AYNSL Sbjct: 250 GLSLTRSTNIITDALSGVTLSLKQADPAVTVSMNIGIDQQALRANVQSFVDAYNSLQTMI 309 Query: 290 SSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSS--SSYKTLAQIGIT 347 S K+ D +++++G L GD L TIQ+ L + L +V S +L IG+ Sbjct: 310 SDQFKF-------DPKTNTSGLLSGDPLLTTIQSNLSNSLFKSVPGLASDRNSLVMIGVE 362 Query: 348 TDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTI 390 D +G+L ++ ++ L D + + + V G T + Sbjct: 363 PD-MNGQLMINENRFGTFLANDPTAIRDVFVAQGSSTNNSLQF 404 Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 72/405 (17%), Positives = 138/405 (34%), Gaps = 31/405 (7%) Query: 68 DLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSK 127 D+F A ++++ + T +G Y+++VT A LT T T ++ Sbjct: 389 DVFVAQGSSTNNSLQFLTNGLTTPSGTYSVNVTQAASKAVLTGTT----DLTPGLAANET 444 Query: 128 LTIQQGGDKDPITIDISAANSSLSGIRDAINN--AKAGVSASIINVGNGEYRLSVTSNDT 185 +TI G I+++A + S I A+N + ++ L T + T Sbjct: 445 VTITDTGTSRQAAINLTAG-QTQSQIISALNAELSTDYTEQHQLSTALTAGGLPATGSTT 503 Query: 186 ----------GLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIE 235 G +++ + A+ S A+ + A Q+A I Sbjct: 504 LSALGLGVAAGDTISISGTRRSGVAVNSSFTVLNPATDTVSTLLTAIQSAFNQEVGATI- 562 Query: 236 NSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKY 295 DA +TL ++ +T + T + Sbjct: 563 -------DATGKVTLTDITTGDSQLSVALTANNQGGGTLAFGADTIVTNGRYALPEQAVA 615 Query: 296 TAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKL 355 + +S+S G+ S ++ T + S LA G + G + Sbjct: 616 SGNMISIESKSYGGGSGFSLSQSANGLGIANQTIAGTDVAGSINGLAATG-SGQMLTG-I 673 Query: 356 ELDADKLTAALK-KDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKT 414 + D L+ VG L VG G + + + G+I+ + T Sbjct: 674 SGNVDGLSLLYTGTTTGAVGNLTVGIGIASALDGILNQYSNPVT---GLIQNSMTQEQAT 730 Query: 415 LNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQ 459 + +T +A + +++ Q QF+ + M SL ++SS+L+Q Sbjct: 731 FDSMTAKIDALTRQMEQQRVSLTNQFSSMQQAMASLQNSSSFLSQ 775 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.143 0.348 Lambda K H 0.267 0.0437 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,168,193,805 Number of Sequences: 3077464 Number of extensions: 75003816 Number of successful extensions: 535239 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1240 Number of HSP's successfully gapped in prelim test: 8048 Number of HSP's that attempted gapping in prelim test: 471805 Number of HSP's gapped (non-prelim): 42565 length of query: 468 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 336 effective length of database: 634,171,108 effective search space: 213081492288 effective search space used: 213081492288 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 95 (41.1 bits)