07/01/2012 21:25:22 : INFO  : Run start: Sat Jan  7 21:25:22 GMT 2012
07/01/2012 21:25:24 : INFO  : Initialised job
07/01/2012 21:25:25 : INFO  : Renaming log file 'phyre2_20120107_212521.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/88104b0d91495aa5/phyre_20120107_212521.log'
07/01/2012 21:25:26 : INFO  : Initialised job:
Sequence
>batch____
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVP
VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM
NVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS
SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG
FRVSIY

07/01/2012 21:25:27 : INFO  : Checked sequence
07/01/2012 21:25:29 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 21:25:29 : INFO  : PSI-BLAST 3 iterations
07/01/2012 21:27:20 : INFO  : PSI-BLAST 5 iterations
07/01/2012 21:29:12 : INFO  : Finished PSI-BLAST
07/01/2012 21:29:13 : INFO  : Running Buildali to generate a3m file
07/01/2012 21:37:46 : INFO  : Converting to HMM
07/01/2012 21:37:48 : INFO  : Calibrating HMM
07/01/2012 21:37:58 : INFO  : Searching HMM database
07/01/2012 21:43:41 : INFO  : Finished buildali
07/01/2012 21:43:42 : INFO  : Predicting secondary structure
07/01/2012 21:43:45 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 21:43:46 : INFO  : Predicting Disordered regions
07/01/2012 21:43:47 : INFO  : Predicted Disorder (Disopred)
07/01/2012 21:43:48 : INFO  : Running memsat_svm check
07/01/2012 21:45:48 : INFO  : Running memsat_svm full
07/01/2012 21:53:18 : INFO  : Predicted Transmembrane (memsat_svm) ID '88104b0d91495aa5'
07/01/2012 21:53:19 : INFO  : Initialising fold library search
07/01/2012 21:53:20 : INFO  : Initialised search input
07/01/2012 21:53:21 : INFO  : Building Ensemble models
07/01/2012 21:53:23 : INFO  : Building hh.c3b8bA_.model.1.pdb
07/01/2012 21:53:30 : INFO  : Building d2hhma_.1.pdb
07/01/2012 21:53:36 : INFO  : Building c2qflA_.2.pdb
07/01/2012 21:53:43 : INFO  : Building c2p3nB_.3.pdb
07/01/2012 21:53:50 : INFO  : Building d1jp4a_.4.pdb
07/01/2012 21:53:57 : INFO  : Building c3b8bA_.5.pdb
07/01/2012 21:54:03 : INFO  : Building c3luzA_.6.pdb
07/01/2012 21:54:10 : INFO  : Building c2czhB_.7.pdb
07/01/2012 21:54:17 : INFO  : Building d1g0ha_.8.pdb
07/01/2012 21:54:23 : INFO  : Building c2fvzB_.9.pdb
07/01/2012 21:54:30 : INFO  : Building d1ka1a_.10.pdb
07/01/2012 21:54:36 : INFO  : Building c2q74B_.11.pdb
07/01/2012 21:54:42 : INFO  : Building d1xi6a_.12.pdb
07/01/2012 21:54:50 : INFO  : Building d1vdwa_.13.pdb
07/01/2012 21:54:58 : INFO  : Building c2pcrA_.14.pdb
07/01/2012 21:55:05 : INFO  : Building d1lbva_.15.pdb
07/01/2012 21:55:13 : INFO  : Building d1inpa_.16.pdb
07/01/2012 21:55:19 : INFO  : Building c3uksB_.17.pdb
07/01/2012 21:55:26 : INFO  : Building d1d9qa_.18.pdb
07/01/2012 21:55:34 : INFO  : Building d1nuwa_.19.pdb
07/01/2012 21:55:41 : INFO  : Building c2fhyL_.20.pdb
07/01/2012 21:55:57 : INFO  : Finished HH model building
07/01/2012 21:55:58 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 21:56:39 : INFO  : html domain output complete ID '88104b0d91495aa5'
07/01/2012 23:09:29 : INFO  : Run end  : Sat Jan  7 23:09:28 GMT 2012
