Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	L	D	Q	V	C	Q	L	A	R	N	A	G	D	A	I	M	Q	V	Y	D	G	T	K	P	M	D	V	V	S	K	A	D	N	S	P	V	T	A	A	D	I	A	A	H	T	V	I	M	D	G	L	R	T	L	T	P	D	V	P
Secondary structure
SS confidence
Disorder		?																							?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		V	L	S	E	E	D	P	P	G	W	E	V	R	Q	H	W	Q	R	Y	W	L	V	D	P	L	D	G	T	K	E	F	I	K	R	N	G	E	F	T	V	N	I	A	L	I	D	H	G	K	P	I	L	G	V	V	Y	A	P	V	M
Secondary structure
SS confidence
Disorder								?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		N	V	M	Y	S	A	A	E	G	K	A	W	K	E	E	C	G	V	R	K	Q	I	Q	V	R	D	A	R	P	P	L	V	V	I	S	R	S	H	A	D	A	E	L	K	E	Y	L	Q	Q	L	G	E	H	Q	T	T	S	I	G	S
Secondary structure
SS confidence
Disorder																				?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		S	L	K	F	C	L	V	A	E	G	Q	A	Q	L	Y	P	R	F	G	P	T	N	I	W	D	T	A	A	G	H	A	V	A	A	A	A	G	A	H	V	H	D	W	Q	G	K	P	L	D	Y	T	P	R	E	S	F	L	N	P	G
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.
Sequence		F	R	V	S	I	Y
Secondary structure
SS confidence
Disorder						?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2hhm chain A Region: 1 - 240 Aligned: 238 Modelled: 240 Confidence: 100.0% Identity: 24% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2qfl chain A Region: 1 - 240 Aligned: 237 Modelled: 240 Confidence: 100.0% Identity: 27% PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: structure of suhb: inositol monophosphatase and extragenic2 suppressor from e. coli Phyre2 PDB 2p3n chain B Region: 2 - 240 Aligned: 232 Modelled: 239 Confidence: 100.0% Identity: 24% PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: thermotoga maritima impase tm1415 Phyre2 PDB 1jp4 chain A Region: 1 - 244 Aligned: 244 Modelled: 244 Confidence: 100.0% Identity: 23% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 3b8b chain A Region: 1 - 244 Aligned: 238 Modelled: 244 Confidence: 100.0% Identity: 47% PDB header:hydrolase Chain: A: PDB Molecule:cysq, sulfite synthesis pathway protein; PDBTitle: crystal structure of cysq from bacteroides thetaiotaomicron, a2 bacterial member of the inositol monophosphatase family Phyre2 PDB 3luz chain A Region: 1 - 240 Aligned: 224 Modelled: 240 Confidence: 100.0% Identity: 25% PDB header:hydrolase Chain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement Phyre2 PDB 2czh chain B Region: 1 - 240 Aligned: 220 Modelled: 227 Confidence: 100.0% Identity: 26% PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: crystal structure of human myo-inositol monophosphatase 22 (impa2) with phosphate ion (orthorhombic form) Phyre2 PDB 1g0h chain A Region: 2 - 244 Aligned: 235 Modelled: 240 Confidence: 100.0% Identity: 17% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2fvz chain B Region: 1 - 240 Aligned: 221 Modelled: 226 Confidence: 100.0% Identity: 25% PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: human inositol monophosphosphatase 2 Phyre2 PDB 1ka1 chain A Region: 2 - 244 Aligned: 242 Modelled: 243 Confidence: 100.0% Identity: 29% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2q74 chain B Region: 1 - 233 Aligned: 212 Modelled: 213 Confidence: 100.0% Identity: 28% PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: mycobacterium tuberculosis suhb Phyre2 PDB 1xi6 chain A Region: 1 - 244 Aligned: 219 Modelled: 232 Confidence: 100.0% Identity: 21% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1vdw chain A Region: 1 - 244 Aligned: 228 Modelled: 242 Confidence: 100.0% Identity: 22% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2pcr chain A Region: 1 - 231 Aligned: 203 Modelled: 205 Confidence: 100.0% Identity: 24% PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: crystal structure of myo-inositol-1(or 4)-monophosphatase (aq_1983)2 from aquifex aeolicus vf5 Phyre2 PDB 1lbv chain A Region: 3 - 244 Aligned: 226 Modelled: 242 Confidence: 100.0% Identity: 20% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1inp chain A Region: 1 - 244 Aligned: 244 Modelled: 244 Confidence: 100.0% Identity: 25% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 3uks chain B Region: 1 - 243 Aligned: 241 Modelled: 242 Confidence: 99.8% Identity: 16% PDB header:hydrolase Chain: B: PDB Molecule:sedoheptulose-1,7 bisphosphatase, putative; PDBTitle: 1.85 angstrom crystal structure of putative sedoheptulose-1,72 bisphosphatase from toxoplasma gondii Phyre2 PDB 1d9q chain A Region: 2 - 243 Aligned: 237 Modelled: 242 Confidence: 99.8% Identity: 19% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 1nuw chain A Region: 2 - 243 Aligned: 241 Modelled: 242 Confidence: 99.4% Identity: 16% Fold: Carbohydrate phosphatase Superfamily: Carbohydrate phosphatase Family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like Phyre2 PDB 2fhy chain L Region: 2 - 243 Aligned: 237 Modelled: 242 Confidence: 99.4% Identity: 17% PDB header:hydrolase Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1; PDBTitle: structure of human liver fpbase complexed with a novel2 benzoxazole as allosteric inhibitor Phyre2 1 d2hhma_ 2 c2qflA_ 3 c2p3nB_ 4 d1jp4a_ 5 c3b8bA_ 6 c3luzA_ 7 c2czhB_ 8 d1g0ha_ 9 c2fvzB_ 10 d1ka1a_ 11 c2q74B_ 12 d1xi6a_ 13 d1vdwa_ 14 c2pcrA_ 15 d1lbva_ 16 d1inpa_ 17 c3uksB_ 18 d1d9qa_ 19 d1nuwa_ 20 c2fhyL_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2hhma_ 100.0 24 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 2 c2qflA_ 100.0 27 PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: structure of suhb: inositol monophosphatase and extragenic2 suppressor from e. coli 3 c2p3nB_ 100.0 24 PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: thermotoga maritima impase tm1415 4 d1jp4a_ 100.0 23 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 5 c3b8bA_ 100.0 47 PDB header:hydrolase Chain: A: PDB Molecule:cysq, sulfite synthesis pathway protein; PDBTitle: crystal structure of cysq from bacteroides thetaiotaomicron, a2 bacterial member of the inositol monophosphatase family 6 c3luzA_ 100.0 25 PDB header:hydrolase Chain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement 7 c2czhB_ 100.0 26 PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: crystal structure of human myo-inositol monophosphatase 22 (impa2) with phosphate ion (orthorhombic form) 8 d1g0ha_ 100.0 17 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 9 c2fvzB_ 100.0 25 PDB header:hydrolase Chain: B: PDB Molecule:inositol monophosphatase 2; PDBTitle: human inositol monophosphosphatase 2 10 d1ka1a_ 100.0 29 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 11 c2q74B_ 100.0 28 PDB header:hydrolase Chain: B: PDB Molecule:inositol-1-monophosphatase; PDBTitle: mycobacterium tuberculosis suhb 12 d1xi6a_ 100.0 21 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 13 d1vdwa_ 100.0 22 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 14 c2pcrA_ 100.0 24 PDB header:hydrolase Chain: A: PDB Molecule:inositol-1-monophosphatase; PDBTitle: crystal structure of myo-inositol-1(or 4)-monophosphatase (aq_1983)2 from aquifex aeolicus vf5 15 d1lbva_ 100.0 20 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 16 d1inpa_ 100.0 25 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 17 c3uksB_ 99.8 16 PDB header:hydrolase Chain: B: PDB Molecule:sedoheptulose-1,7 bisphosphatase, putative; PDBTitle: 1.85 angstrom crystal structure of putative sedoheptulose-1,72 bisphosphatase from toxoplasma gondii 18 d1d9qa_ 99.8 19 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 19 d1nuwa_ 99.4 16 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 20 c2fhyL_ 99.4 17 PDB header:hydrolase Chain: L: PDB Molecule:fructose-1,6-bisphosphatase 1; PDBTitle: structure of human liver fpbase complexed with a novel2 benzoxazole as allosteric inhibitor 21 d1ftaa_ not modelled 99.3 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 22 c2gq1A_ not modelled 99.1 17 PDB header:hydrolase Chain: A: PDB Molecule:fructose-1,6-bisphosphatase; PDBTitle: crystal structure of recombinant type i fructose-1,6-bisphosphatase2 from escherichia coli complexed with sulfate ions 23 d1bk4a_ not modelled 99.1 15 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 24 d1spia_ not modelled 98.9 18 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:Inositol monophosphatase/fructose-1,6-bisphosphatase-like 25 d1ni9a_ not modelled 96.5 17 Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:GlpX-like bacterial fructose-1,6-bisphosphatase 26 d1o12a1 not modelled 60.8 45 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:N-acetylglucosamine-6-phosphate deacetylase, NagA 27 c3fhkF_ not modelled 42.9 13 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:upf0403 protein yphp; PDBTitle: crystal structure of apc1446, b.subtilis yphp disulfide2 isomerase 28 d1mdah_ not modelled 42.5 16 Fold:7-bladed beta-propeller Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase Family:Methylamine dehydrogenase, H-chain 29 d2dsqg1 not modelled 29.4 27 Fold:Thyroglobulin type-1 domain Superfamily:Thyroglobulin type-1 domain Family:Thyroglobulin type-1 domain 30 d1icfi_ not modelled 28.4 31 Fold:Thyroglobulin type-1 domain Superfamily:Thyroglobulin type-1 domain Family:Thyroglobulin type-1 domain 31 d1g4ma1 not modelled 25.3 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 32 c2h7tA_ not modelled 23.9 25 PDB header:protein binding Chain: A: PDB Molecule:insulin-like growth factor-binding protein 2; PDBTitle: solution structure of the c-terminal domain of insulin-like2 growth factor binding protein 2 (igfbp-2) 33 d1rmja_ not modelled 21.2 31 Fold:Thyroglobulin type-1 domain Superfamily:Thyroglobulin type-1 domain Family:Thyroglobulin type-1 domain 34 d1cf1a1 not modelled 21.2 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 35 c1cf1B_ not modelled 20.2 20 PDB header:structural protein Chain: B: PDB Molecule:protein (arrestin); PDBTitle: arrestin from bovine rod outer segments 36 d2dsrg1 not modelled 20.2 27 Fold:Thyroglobulin type-1 domain Superfamily:Thyroglobulin type-1 domain Family:Thyroglobulin type-1 domain 37 c1ikqA_ not modelled 19.9 31 PDB header:transferase Chain: A: PDB Molecule:exotoxin a; PDBTitle: pseudomonas aeruginosa exotoxin a, wild type 38 c2pncB_ not modelled 18.8 23 PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase, liver isozyme; PDBTitle: crystal structure of bovine plasma copper-containing amine oxidase in2 complex with clonidine 39 d1x4ka1 not modelled 18.6 63 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 40 c3equB_ not modelled 18.0 16 PDB header:biosynthetic protein Chain: B: PDB Molecule:penicillin-binding protein 2; PDBTitle: crystal structure of penicillin-binding protein 2 from neisseria2 gonorrhoeae 41 d1r89a1 not modelled 17.5 27 Fold:PAP/OAS1 substrate-binding domain Superfamily:PAP/OAS1 substrate-binding domain Family:Archaeal tRNA CCA-adding enzyme substrate-binding domain 42 c3g5uB_ not modelled 16.1 12 PDB header:membrane protein Chain: B: PDB Molecule:multidrug resistance protein 1a; PDBTitle: structure of p-glycoprotein reveals a molecular basis for2 poly-specific drug binding 43 c3b5xB_ not modelled 15.0 20 PDB header:membrane protein Chain: B: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of msba from vibrio cholerae 44 c2hydB_ not modelled 12.6 18 PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 45 d1w7ca1 not modelled 12.2 38 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 46 d2g5gx1 not modelled 11.9 6 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:ChaN-like 47 c1ayrA_ not modelled 11.6 19 PDB header:sensory transduction Chain: A: PDB Molecule:arrestin; PDBTitle: arrestin from bovine rod outer segments 48 c3ue3A_ not modelled 11.1 11 PDB header:transferase Chain: A: PDB Molecule:septum formation, penicillin binding protein 3, PDBTitle: crystal structure of acinetobacter baumanni pbp3 49 d3pmga4 not modelled 9.7 17 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 50 d1kfia4 not modelled 8.9 50 Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain 51 c1sz1A_ not modelled 8.7 20 PDB header:transferase/rna Chain: A: PDB Molecule:trna nucleotidyltransferase; PDBTitle: mechanism of cca-adding enzymes specificity revealed by crystal2 structures of ternary complexes 52 c3b5wE_ not modelled 8.5 18 PDB header:membrane protein Chain: E: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of eschericia coli msba 53 c3djeA_ not modelled 8.1 14 PDB header:oxidoreductase Chain: A: PDB Molecule:fructosyl amine: oxygen oxidoreductase; PDBTitle: crystal structure of the deglycating enzyme fructosamine2 oxidase from aspergillus fumigatus (amadoriase ii) in3 complex with fsa 54 c1w7cA_ not modelled 8.1 38 PDB header:oxidoreductase Chain: A: PDB Molecule:lysyl oxidase; PDBTitle: pplo at 1.23 angstroms 55 d1p7ga2 not modelled 7.8 20 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 56 d1dfma_ not modelled 7.7 50 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease BglII 57 d2b7oa1 not modelled 7.7 31 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class-II DAHP synthetase 58 c1gn4B_ not modelled 7.5 10 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase; PDBTitle: h145e mutant of mycobacterium tuberculosis iron-superoxide2 dismutase. 59 d2j9ga2 not modelled 7.3 15 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 60 d1d6za1 not modelled 7.2 23 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 61 c1pmdA_ not modelled 7.1 15 PDB header:peptidoglycan synthesis Chain: A: PDB Molecule:peptidoglycan synthesis multifunctional enzyme; PDBTitle: penicillin-binding protein 2x (pbp-2x) 62 c1jsyA_ not modelled 6.9 21 PDB header:signaling protein Chain: A: PDB Molecule:bovine arrestin-2 (full length); PDBTitle: crystal structure of bovine arrestin-2 63 c3higB_ not modelled 6.7 38 PDB header:oxidoreductase Chain: B: PDB Molecule:amiloride-sensitive amine oxidase; PDBTitle: crystal structure of human diamine oxidase in complex with the2 inhibitor berenil 64 d1w2za1 not modelled 6.7 31 Fold:Supersandwich Superfamily:Amine oxidase catalytic domain Family:Amine oxidase catalytic domain 65 d1idsa2 not modelled 6.4 10 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 66 d1f46a_ not modelled 6.4 21 Fold:TBP-like Superfamily:Cell-division protein ZipA, C-terminal domain Family:Cell-division protein ZipA, C-terminal domain 67 d1tuea_ not modelled 6.3 18 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 68 d1g3pa2 not modelled 6.0 71 Fold:N-terminal domains of the minor coat protein g3p Superfamily:N-terminal domains of the minor coat protein g3p Family:N-terminal domains of the minor coat protein g3p 69 c1px5A_ not modelled 5.9 29 PDB header:transferase Chain: A: PDB Molecule:2'-5'-oligoadenylate synthetase 1; PDBTitle: crystal structure of the 2'-specific and double-stranded2 rna-activated interferon-induced antiviral protein 2'-5'-3 oligoadenylate synthetase 70 d1m1la_ not modelled 5.9 23 Fold:Suppressor of Fused, N-terminal domain Superfamily:Suppressor of Fused, N-terminal domain Family:Suppressor of Fused, N-terminal domain 71 c2cw3A_ not modelled 5.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:iron superoxide dismutase; PDBTitle: x-ray structure of pmsod2, superoxide dismutase from2 perkinsus marinus 72 d1wdjb_ not modelled 5.6 33 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hypothetical protein TT1808 (TTHA1514) 73 c3dgsA_ not modelled 5.5 60 PDB header:viral protein Chain: A: PDB Molecule:coat protein a; PDBTitle: changing the determinants of protein stability from2 covalent to non-covalent interactions by in-vitro3 evolution: a structural and energetic analysis 74 c1jibA_ not modelled 5.5 16 PDB header:hydrolase Chain: A: PDB Molecule:neopullulanase; PDBTitle: complex of alpha-amylase ii (tva ii) from thermoactinomyces2 vulgaris r-47 with maltotetraose based on a crystal soaked3 with maltohexaose. 75 c1ma1E_ not modelled 5.4 5 PDB header:oxidoreductase Chain: E: PDB Molecule:superoxide dismutase; PDBTitle: structure and properties of the atypical iron superoxide2 dismutase from methanobacterium thermoautotrophicum 76 c1kkcB_ not modelled 5.4 15 PDB header:oxidoreductase Chain: B: PDB Molecule:manganese superoxide dismutase; PDBTitle: crystal structure of aspergillus fumigatus mnsod 77 c1svfB_ not modelled 5.3 36 PDB header:viral protein Chain: B: PDB Molecule:protein (fusion glycoprotein); PDBTitle: paramyxovirus sv5 fusion protein core 78 c3ot2B_ not modelled 5.3 50 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative nuclease belonging to duf8202 (ava_3926) from anabaena variabilis atcc 29413 at 1.96 a resolution 79 c3ot2A_ not modelled 5.3 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative nuclease belonging to duf8202 (ava_3926) from anabaena variabilis atcc 29413 at 1.96 a resolution

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0