3 c2it1B_ Probab=100.00  E-value=0  Score=478.38  Aligned_columns=351  Identities=39%

Q ss_pred             EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHCCEEEEEEE
Q ss_conf             99944699948888763232468899789998799988989999996687477227998778076689767463378640
Q batch____        18 VQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQS   97 (378)
Q Consensus        18 l~~~~l~k~~g~~~~l~~vsl~i~~Gei~~liG~nGaGKSTLl~~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~i~~v~~~   97 (378)
                      |+++||+|+|+++++|+++||++++||+++|+|+||||||||+|+|+|+++|++|+|+++|++++..++..+.+++++|+
T Consensus         3 l~~~~i~k~~~~~~~l~~vsl~i~~Gei~~l~G~nGaGKSTLl~~l~G~~~p~~G~I~i~g~~~~~~~~~~~~i~~v~q~   82 (361)
T c2it1B_           3 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQN   82 (361)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTEEEECTT
T ss_pred             EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHCEEEEEEEC
T ss_conf             99964899858989864232468899789998799988889999995687376117999889820099746135466303


Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             25688630332113464322221100355566430122220002334100580368899999986349749998340109
Q batch____        98 YALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSA  177 (378)
Q Consensus        98 ~~l~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lAral~~~p~illlDEP~s~  177 (378)
                      +.+++++++.+|+.+.+..++........++.++++.+++..+.++++.+||+||||||+|||||+.+|++|||||||++
T Consensus        83 ~~l~~~ltv~~n~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~iAral~~~p~llllDEPts~  162 (361)
T c2it1B_          83 WALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSN  162 (361)
T ss_dssp             CCCCTTSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEESGGGG
T ss_pred             CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             43331003542121122222221022212368886312653111001223320257889999985148749999773228


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEECCCCEEEEECCHHHHHHCCCCHHHHHHHCCCCCEEEE
Q ss_conf             88899999999999999982982257740578888535889993278598848989998468997899970885613237
Q batch____       178 LDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNAT  257 (378)
Q Consensus       178 LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~e~~~~aDri~vl~~Gri~~~g~~~ei~~~P~~~~~a~~lg~~~~~~~~  257 (378)
                      ||+..+.++++.|+++.++.|+|+|++||+++|++.+||||+||++||+++.|+++|+|.+|.+.+++.++|..+.....
T Consensus       163 LD~~~~~~l~~~l~~~~~~~g~tvi~vtH~~~e~~~~~d~i~vl~~G~i~~~g~~~ei~~~P~~~~~a~~~G~~~~~~~~  242 (361)
T c2it1B_         163 LDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVE  242 (361)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSBHHHHHHSBTTBCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCEEEECCCCEEEEECCHHHHHHCCCCCHHHHHCCCCCCCEEE
T ss_conf             98899999999999999871981158740677878643889992067682534988998288873478872887651575


Q ss_pred             EECCCCCCEEEEECC-CCCEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEECCC
Q ss_conf             722578723887226-5402202466666786489998643049930588766432999999999729828999997899
Q batch____       258 VIERLDEQRVRANVE-GRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENG  336 (378)
Q Consensus       258 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~irp~~i~l~~~~~~~~~~~l~g~V~~~~~~G~~~~v~~~~~~G  336 (378)
                      ............... .................+..++||+++++.......    +.|+|...++.|....+.+++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~irp~~~~l~~~~~~~----~~g~v~~~~~~G~~~~~~l~~~~~  318 (361)
T c2it1B_         243 AKVEDGKLVITEKSKLPIPKQYVEIVKETGITEVIIGFRPHDAEIVKGEGEG----IVGEVYSFEPLGREQIVTVSVNDS  318 (361)
T ss_dssp             EEEETTEEESSSSCEEECCGGGHHHHHHHTCCEEEEEECGGGEEEEESSCSS----EEEEEEEEEECSSEEEEEEEETTE
T ss_pred             EEEECCCEEEECCCEEECCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC----EEEEEEEEEECCCEEEEEEEECCE
T ss_conf             8982682687225322325433343455677606996754335994078882----899999999759739999998996


Q ss_pred             CEEEEEEECCCCCCCCCCCCCCEEEEEECHHHEEEECCCCCC
Q ss_conf             789999723445444774988789999864226991485789
Q batch____       337 KMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK  378 (378)
Q Consensus       337 ~~~~~~~~~~~~~~~~~l~~G~~v~l~~~~~~~~~l~~~~~r  378 (378)
                      ......      .....+.+|++|+++|++++.++|+.+..|
T Consensus       319 ~i~~~~------~~~~~l~~G~~v~i~~~~~~i~vFd~~~~r  354 (361)
T c2it1B_         319 IVKVFA------PEGEHFSFGEKVTIKVKEELLVLFDKKTEK  354 (361)
T ss_dssp             EEEEEE------ETTCCCCTTCEEEEEECGGGCEEEETTTCB
T ss_pred             EEEEEE------CCCCCCCCCCEEEEEECHHHEEEECHHHHH
T ss_conf             999997------288885888779999877738986604412