145 c1vmaA_ Probab=97.44   E-value=0.00073  Score=41.65  Aligned_columns=132  Identities=20%

Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHCCEEEEEEECCCCCCCEEEEECCCCC
Q ss_conf             23246889978999879998898999999668747722799877807668976746337864025688630332113464
Q batch____        35 QLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGL  114 (378)
Q Consensus        35 ~vsl~i~~Gei~~liG~nGaGKSTLl~~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~i~~v~~~~~l~~~~tv~~ni~~~~  114 (378)
                      .+.+.-.++.+++++||+|+||||++--|+..+.-..-+|.+-.-|....                              
T Consensus        84 ~~~~~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~------------------------------  133 (294)
T c1vmaA_          84 KLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRA------------------------------  133 (294)
T ss_dssp             CCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCH------------------------------
T ss_pred             CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCH------------------------------
T ss_conf             00235789669999806887602489999999996799489997587686------------------------------


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE----------------------
Q ss_conf             3222211003555664301222200023341005803688999999863497499983----------------------
Q batch____       115 RMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLD----------------------  172 (378)
Q Consensus       115 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lAral~~~p~illlD----------------------  172 (378)
                              ...+....+.+.+++.-+....+.+++.=.++-+..|+  ..+-+++|.|                      
T Consensus       134 --------gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~  203 (294)
T c1vmaA_         134 --------AAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHAL--ARNKDVVIIDTAGRLHTKKNLMEELRKVHRVV  203 (294)
T ss_dssp             --------HHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHH--HTTCSEEEEEECCCCSCHHHHHHHHHHHHHHG
T ss_pred             --------HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             --------47999999997619828974883698999999999999--77998999818889878579999999999996


Q ss_pred             ---------CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             ---------4010988899999999999999982982257740
Q batch____       173 ---------ESLSALDYKLRKQMQNELKALQRKLGITFVFVTH  206 (378)
Q Consensus       173 ---------EP~s~LD~~~~~~i~~~l~~l~~~~g~tii~vTH  206 (378)
                               |..--+|........+.+....+..+.+-++.|+
T Consensus       204 ~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIlTK  246 (294)
T c1vmaA_         204 KKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTK  246 (294)
T ss_dssp             GGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             HHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             3035668853999811468789999999996308997699974