Phyre 2 Results for P12295

Email | l.a.kelley@imperial.ac.uk
Description | P12295
Date | Thu Jan 5 11:33:09 GMT 2012
Unique Job ID | 87a38d28347ab13b

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d3euga_ |
|  | 100.0 | 99 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Uracil-DNA glycosylase
2 | c3tr7A_ |
|  | 100.0 | 62 | PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: structure of a uracil-dna glycosylase (ung) from coxiella burnetii
3 | d1okba_ |
|  | 100.0 | 59 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Uracil-DNA glycosylase
4 | d2hxma1 |
|  | 100.0 | 56 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Uracil-DNA glycosylase
5 | c2booA_ |
|  | 100.0 | 55 | PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: the crystal structure of uracil-dna n-glycosylase (ung)2 from deinococcus radiodurans.
6 | c3cxmA_ |
|  | 100.0 | 48 | PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: leishmania naiffi uracil-dna glycosylase in complex with 5-bromouracil
7 | d1laue_ |
|  | 100.0 | 46 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Uracil-DNA glycosylase
8 | c2zhxG_ |
|  | 100.0 | 38 | PDB header:hydrolase/hydrolase inhibitor Chain: G: PDB Molecule:uracil-dna glycosylase; PDBTitle: crystal structure of uracil-dna glycosylase from mycobacterium2 tuberculosis in complex with a proteinaceous inhibitor
9 | d2j8xa1 |
|  | 100.0 | 48 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Uracil-DNA glycosylase
10 | c2owrD_ |
|  | 100.0 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:uracil-dna glycosylase; PDBTitle: crystal structure of vaccinia virus uracil-dna glycosylase
11 | c2rbaB_ |
|  | 97.0 | 10 | PDB header:hydrolase/dna Chain: B: PDB Molecule:g/t mismatch-specific thymine dna glycosylase; PDBTitle: structure of human thymine dna glycosylase bound to abasic and2 undamaged dna
12 | c2c2pA_ |
|  | 95.0 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:g/u mismatch-specific dna glycosylase; PDBTitle: the crystal structure of mismatch specific uracil-dna2 glycosylase (mug) from deinococcus radiodurans
13 | d1oe4a_ |
|  | 94.7 | 17 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
14 | d1muga_ |
|  | 94.7 | 13 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Mug-like
15 | d1ui0a_ |
|  | 94.3 | 18 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Mug-like
16 | c3ikbB_ |
|  | 93.6 | 23 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a conserved protein from streptococcus2 mutans ua159.
17 | c2d3yA_ |
|  | 92.4 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: crystal structure of uracil-dna glycosylase from thermus thermophilus2 hb8
18 | d1vk2a_ |
|  | 90.4 | 20 | Fold:Uracil-DNA glycosylase-like Superfamily:Uracil-DNA glycosylase-like Family:Mug-like
19 | c2h2wA_ |
|  | 50.6 | 18 | PDB header:transferase Chain: A: PDB Molecule:homoserine o-succinyltransferase; PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution
20 | c3p9xB_ |
|  | 35.1 | 18 | PDB header:transferase Chain: B: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 bacillus halodurans
21 | d1meoa_ |
| not modelled | 32.3 | 20 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
22 | c2l3fA_ |
| not modelled | 30.2 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of a putative uracil dna glycosylase from2 methanosarcina acetivorans, northeast structural genomics consortium3 target mvr76
23 | c2ywrA_ |
| not modelled | 30.0 | 17 | PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of gar transformylase from aquifex2 aeolicus
24 | c3tqrA_ |
| not modelled | 25.7 | 17 | PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: structure of the phosphoribosylglycinamide formyltransferase (purn) in2 complex with ches from coxiella burnetii
25 | d1jkxa_ |
| not modelled | 22.1 | 25 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
26 | c3dcjA_ |
| not modelled | 19.5 | 15 | PDB header:transferase Chain: A: PDB Molecule:probable 5'-phosphoribosylglycinamide PDBTitle: crystal structure of glycinamide formyltransferase (purn)2 from mycobacterium tuberculosis in complex with 5-methyl-5,3 6,7,8-tetrahydrofolic acid derivative
27 | c3t7hB_ |
| not modelled | 15.6 | 20 | PDB header:ligase Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: atg8 transfer from atg7 to atg3: a distinctive e1-e2 architecture and2 mechanism in the autophagy pathway
28 | c1fmtA_ |
| not modelled | 15.1 | 21 | PDB header:formyltransferase Chain: A: PDB Molecule:methionyl-trna fmet formyltransferase; PDBTitle: methionyl-trnafmet formyltransferase from escherichia coli
29 | d2ghra1 |
| not modelled | 14.4 | 11 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:HTS-like
30 | c3nrbD_ |
| not modelled | 13.4 | 11 | PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution
31 | d2blna2 |
| not modelled | 12.8 | 21 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
32 | d1fmta2 |
| not modelled | 12.3 | 18 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
33 | c2yqsA_ |
| not modelled | 12.0 | 17 | PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of uridine-diphospho-n-acetylglucosamine2 pyrophosphorylase from candida albicans, in the product-binding form
34 | c3o1lB_ |
| not modelled | 11.8 | 25 | PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
35 | d1maba2 |
| not modelled | 11.7 | 29 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
36 | d2bw0a2 |
| not modelled | 10.7 | 27 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
37 | c3n0vD_ |
| not modelled | 10.5 | 17 | PDB header:hydrolase Chain: D: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pp_0327)2 from pseudomonas putida kt2440 at 2.25 a resolution
38 | c3oc9A_ |
| not modelled | 10.4 | 14 | PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica
39 | c2p2gD_ |
| not modelled | 10.4 | 12 | PDB header:transferase Chain: D: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from mycobacterium2 tuberculosis (rv1656): orthorhombic form
40 | d1skyb2 |
| not modelled | 9.8 | 33 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
41 | c3ogzA_ |
| not modelled | 9.6 | 13 | PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form
42 | c3obiC_ |
| not modelled | 9.4 | 15 | PDB header:hydrolase Chain: C: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution
43 | d1fx0a2 |
| not modelled | 9.4 | 29 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
44 | c1yrwA_ |
| not modelled | 9.3 | 21 | PDB header:transferase Chain: A: PDB Molecule:protein arna; PDBTitle: crystal structure of e.coli arna transformylase domain
45 | c2xrfA_ |
| not modelled | 8.9 | 54 | PDB header:transferase Chain: A: PDB Molecule:uridine phosphorylase 2; PDBTitle: crystal structure of human uridine phosphorylase 2
46 | c3e35A_ |
| not modelled | 8.5 | 18 | PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein sco1997; PDBTitle: actinobacteria-specific protein of unknown function, sco1997
47 | d1pj3a1 |
| not modelled | 8.5 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
48 | d2jdia2 |
| not modelled | 8.3 | 29 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase
49 | d1q3qa2 |
| not modelled | 8.1 | 26 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:GroEL apical domain-like Family:Group II chaperonin (CCT, TRIC), apical domain
50 | c3kcqA_ |
| not modelled | 8.1 | 20 | PDB header:transferase Chain: A: PDB Molecule:phosphoribosylglycinamide formyltransferase; PDBTitle: crystal structure of phosphoribosylglycinamide formyltransferase from2 anaplasma phagocytophilum
51 | d1ekxa2 |
| not modelled | 7.9 | 26 | Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase
52 | d2j13a1 |
| not modelled | 7.8 | 9 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
53 | c1z7eC_ |
| not modelled | 7.6 | 21 | PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna
54 | c2k3mA_ |
| not modelled | 7.2 | 70 | PDB header:membrane protein Chain: A: PDB Molecule:rv1761c; PDBTitle: rv1761c
55 | c2iw0A_ |
| not modelled | 7.2 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:chitin deacetylase; PDBTitle: structure of the chitin deacetylase from the fungal2 pathogen colletotrichum lindemuthianum
56 | d1r2aa_ |
| not modelled | 7.0 | 25 | Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
57 | c3eufC_ |
| not modelled | 6.7 | 54 | PDB header:transferase Chain: C: PDB Molecule:uridine phosphorylase 1; PDBTitle: crystal structure of bau-bound human uridine phosphorylase 1
58 | d1jv1a_ |
| not modelled | 6.6 | 14 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:UDP-glucose pyrophosphorylase
59 | d1s3ia2 |
| not modelled | 6.6 | 26 | Fold:Formyltransferase Superfamily:Formyltransferase Family:Formyltransferase
60 | c1w4xA_ |
| not modelled | 6.4 | 27 | PDB header:oxygenase Chain: A: PDB Molecule:phenylacetone monooxygenase; PDBTitle: phenylacetone monooxygenase, a baeyer-villiger2 monooxygenase
61 | d2f4za1 |
| not modelled | 6.4 | 31 | Fold:UBC-like Superfamily:UBC-like Family:UBC-related
62 | d1vm8a_ |
| not modelled | 6.3 | 17 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:UDP-glucose pyrophosphorylase
63 | c2i5kB_ |
| not modelled | 6.3 | 14 | PDB header:transferase Chain: B: PDB Molecule:utp--glucose-1-phosphate uridylyltransferase; PDBTitle: crystal structure of ugp1p
64 | d1w4xa1 |
| not modelled | 6.3 | 29 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains
65 | c3q0iA_ |
| not modelled | 6.2 | 14 | PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from vibrio cholerae
66 | d2icya2 |
| not modelled | 6.2 | 15 | Fold:Nucleotide-diphospho-sugar transferases Superfamily:Nucleotide-diphospho-sugar transferases Family:UDP-glucose pyrophosphorylase
67 | d1vl6a1 |
| not modelled | 6.0 | 42 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
68 | c2yr6A_ |
| not modelled | 6.0 | 25 | PDB header:oxidoreductase Chain: A: PDB Molecule:pro-enzyme of l-phenylalanine oxidase; PDBTitle: crystal structure of l-phenylalanine oxidase from psuedomonas sp.p501
69 | d1o0sa1 |
| not modelled | 5.9 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
70 | c1zghA_ |
| not modelled | 5.8 | 36 | PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from clostridium thermocellum
71 | d2vgna2 |
| not modelled | 5.7 | 29 | Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:ERF1/Dom34 middle domain-like
72 | c3rf1B_ |
| not modelled | 5.7 | 14 | PDB header:ligase Chain: B: PDB Molecule:glycyl-trna synthetase alpha subunit; PDBTitle: the crystal structure of glycyl-trna synthetase subunit alpha from2 campylobacter jejuni subsp. jejuni nctc 11168
73 | d1gq2a1 |
| not modelled | 5.6 | 37 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
74 | c3tqqA_ |
| not modelled | 5.6 | 17 | PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: structure of the methionyl-trna formyltransferase (fmt) from coxiella2 burnetii
75 | c2vkzH_ |
| not modelled | 5.6 | 13 | PDB header:transferase Chain: H: PDB Molecule:fatty acid synthase subunit beta; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex
76 | d1w44a_ |
| not modelled | 5.5 | 33 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain)
77 | d2igsa1 |
| not modelled | 5.5 | 41 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:PA2222-like
78 | c3louB_ |
| not modelled | 5.1 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution