Phyre 2 alignment of P12295 with d2vgna2

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Job Description | P12295
Confidence | 5.68% | Date | Thu Jan 5 11:33:09 GMT 2012
Rank | 71 | Aligned Residues | 24
% Identity | 29% | Template | d2vgna2
SCOP info | Ribonuclease H-like motif | Translational machinery components | ERF1/Dom34 middle domain-like
Resolution | 2.5

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | D | V | F | N | A | F | R | . | F | T | E | L | G | D | V | K | V | V | I | L | G | Q | D | P | Y | H | G | P | G
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
Template Sequence |  | K | A | I | Y | S | A | X | K | K | D | L | N | F | D | K | L | K | T | I | I | L | C | . | . | . | . | . | S | P | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  | S |  |  |  |  |  | . | . | . | . | . |  | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |  |  |  |  |  | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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