Phyre 2 alignment of P0AD19 with c2w42A_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AD19
Confidence | 1.51% | Date | Thu Jan 5 11:19:42 GMT 2012
Rank | 84 | Aligned Residues | 20
% Identity | 15% | Template | c2w42A_
PDB info | PDB header:protein/dna complex | Chain: A: PDB Molecule:putative uncharacterized protein; | PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex.
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | K | S | V | T | T | P | I | A | M | A | V | G | G | S | I | G | G | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | T | F | Y | V | D | N | L | L | V | Q | F | V | S | K | L | G | G | K | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | B |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions