Phyre 2 alignment of P0AD19 with c3l6tB_

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Job Description | P0AD19
Confidence | 2.08% | Date | Thu Jan 5 11:19:42 GMT 2012
Rank | 50 | Aligned Residues | 21
% Identity | 29% | Template | c3l6tB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:mobilization protein trai; | PDBTitle: crystal structure of an n-terminal mutant of the plasmid pcu1 trai2 relaxase domain
Resolution | 1.93 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | P | K | S | V | T | T | P | I | A | M | A | V | G | G | S | I | G | G | I | P | A | I | S | A | V | C
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | P | K | G | V | S | M | Q | A | L | I | . | . | . | . | . | . | H | G | D | K | T | I | I | E | A | H
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 89 | 90 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | 100 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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