17/01/2012 19:51:18 : INFO  : Run start: Tue Jan 17 19:51:17 GMT 2012
17/01/2012 19:51:24 : INFO  : Initialised job
17/01/2012 19:51:26 : INFO  : Renaming log file 'phyre2_20120117_195116.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/878d0acd139a2537/phyre_20120117_195116.log'
17/01/2012 19:51:28 : INFO  : Initialised job:
Sequence
>batch____
MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSE
VLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIA
ASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA
MGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG

17/01/2012 19:51:29 : INFO  : Checked sequence
17/01/2012 19:51:35 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 19:51:36 : INFO  : PSI-BLAST 3 iterations
17/01/2012 19:53:50 : INFO  : PSI-BLAST 5 iterations
17/01/2012 19:55:29 : INFO  : Finished PSI-BLAST
17/01/2012 19:55:32 : INFO  : Running Buildali to generate a3m file
17/01/2012 20:05:27 : INFO  : Converting to HMM
17/01/2012 20:05:30 : INFO  : Calibrating HMM
17/01/2012 20:05:49 : INFO  : Searching HMM database
17/01/2012 20:11:07 : INFO  : Finished buildali
17/01/2012 20:11:10 : INFO  : Predicting secondary structure
17/01/2012 20:11:26 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 20:11:29 : INFO  : Predicting Disordered regions
17/01/2012 20:11:36 : INFO  : Predicted Disorder (Disopred)
17/01/2012 20:11:39 : INFO  : Running memsat_svm check
17/01/2012 20:15:15 : INFO  : Running memsat_svm full
17/01/2012 20:20:15 : INFO  : Predicted Transmembrane (memsat_svm) ID '878d0acd139a2537'
17/01/2012 20:20:19 : INFO  : Initialising fold library search
17/01/2012 20:20:24 : INFO  : Initialised search input
17/01/2012 20:20:27 : INFO  : Building Ensemble models
17/01/2012 20:20:33 : INFO  : Building hh.c2yvxD_.model.1.pdb
17/01/2012 20:20:55 : INFO  : Building c2yvxD_.1.pdb
17/01/2012 20:21:15 : INFO  : Building d2yvxa3.2.pdb
17/01/2012 20:21:34 : INFO  : Building d1l7va_.3.pdb
17/01/2012 20:21:54 : INFO  : Building d1z0kb1.4.pdb
17/01/2012 20:22:16 : INFO  : Building c3zv0A_.5.pdb
17/01/2012 20:22:38 : INFO  : Building c3rfuC_.6.pdb
17/01/2012 20:23:01 : INFO  : Building d1yzma1.7.pdb
17/01/2012 20:23:24 : INFO  : Building c1ckxA_.8.pdb
17/01/2012 20:23:47 : INFO  : Building c1ciiA_.9.pdb
17/01/2012 20:24:13 : INFO  : Building c2ks1B_.10.pdb
17/01/2012 20:24:38 : INFO  : Building c3p5nA_.11.pdb
17/01/2012 20:25:01 : INFO  : Building d2akza2.12.pdb
17/01/2012 20:25:25 : INFO  : Building c1ckwA_.13.pdb
17/01/2012 20:25:47 : INFO  : Building c1unyA_.14.pdb
17/01/2012 20:26:10 : INFO  : Building c2ju0B_.15.pdb
17/01/2012 20:26:34 : INFO  : Building d2al1a2.16.pdb
17/01/2012 20:26:57 : INFO  : Building c3hlsE_.17.pdb
17/01/2012 20:27:20 : INFO  : Building c2l2tA_.18.pdb
17/01/2012 20:27:43 : INFO  : Building c3syjA_.19.pdb
17/01/2012 20:28:06 : INFO  : Building c1bh0A_.20.pdb
17/01/2012 20:28:55 : INFO  : Finished HH model building
17/01/2012 20:28:57 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 20:30:13 : INFO  : html domain output complete ID '878d0acd139a2537'
17/01/2012 20:37:27 : INFO  : Run end  : Tue Jan 17 20:37:25 GMT 2012
