140 c2ja1A_ Probab=97.52   E-value=0.0016  Score=40.39  Aligned_columns=127  Identities=17%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHC
Q ss_conf             79978999879998888999999568868732799888875332110001122333036530134543300002443210
Q batch____        29 PAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLE  108 (343)
Q Consensus        29 ~~Ge~~~i~G~nGsGKSTll~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~~~~~~~  108 (343)
                      ++|.+..|.||-||||||+|..++-.+....-.|.+                     .-+.....+....+........+
T Consensus         8 ~~G~i~li~Gp~gSGKTt~L~~~l~~~~~~~~~v~~---------------------i~~~~~~r~~~~~i~~~~g~~~~   66 (193)
T c2ja1A_           8 QNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIV---------------------FKPCIDNRYSEEDVVSHNGLKVK   66 (193)
T ss_dssp             CCCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEE---------------------EEETTCCSSCSSEEECTTSCEEE
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEE---------------------ECCCCCCHHHCCCEEHHCCCCCC
T ss_conf             797399997697897899999999973327976999---------------------72863001101453022084347


Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             14653012211125666531012221122122322101568999851035633644113457898899999999999998
Q batch____       109 LDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINR  188 (343)
Q Consensus       109 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~p~ililDEPt~~LD~~~~~~i~~~l~~l~~  188 (343)
                      .............                                 +..+|+++++||. ..+|..    +.+.++.+..
T Consensus        67 ~~~~~~~~~l~~~---------------------------------l~~~~dvIiIDE~-qfl~~~----~~e~~~~l~~  108 (193)
T c2ja1A_          67 AVPVSASKDIFEH---------------------------------ITEELDVIAIDEV-QFFDGD----IVEVVQVLAN  108 (193)
T ss_dssp             CEEESSGGGGGGG---------------------------------CCSSCCEEEESSG-GGSCTT----HHHHHHHHHH
T ss_pred             CCCCCCHHHHHHH---------------------------------HHCCCCEEEECCH-HHCCHH----HHHHHHHHHH
T ss_conf             7644807999999---------------------------------7449989998685-438988----9999999997


Q ss_pred             HCCCEEEEEC----------CCHHHHHHHCCEEEEEE
Q ss_conf             7598899981----------99899998588899986
Q batch____       189 RLGLTILLIT----------HEMDVVKRICDCVAVIS  215 (343)
Q Consensus       189 ~~g~tii~vs----------H~~~~~~~l~d~i~vl~  215 (343)
                      . |..|++..          -....+..+||.+..+.
T Consensus       109 ~-g~~Vi~~gl~~~~~~~~f~~~~~L~~~ad~i~~l~  144 (193)
T c2ja1A_         109 R-GYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQ  144 (193)
T ss_dssp             T-TCEEEEEEESBCTTSCBCSSHHHHHHHCSEEEECC
T ss_pred             C-CCEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEE
T ss_conf             7-98799994454122460247999998642100312