09/01/2012 12:05:18 : INFO  : Run start: Mon Jan  9 12:05:18 GMT 2012
09/01/2012 12:05:21 : INFO  : Initialised job
09/01/2012 12:05:22 : INFO  : Renaming log file 'phyre2_20120109_120518.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/87303bd1c7a2df11/phyre_20120109_120518.log'
09/01/2012 12:05:22 : INFO  : Initialised job:
Sequence
>batch____
MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADR
GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASTIRL
N

09/01/2012 12:05:23 : INFO  : Checked sequence
09/01/2012 12:05:24 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 12:05:24 : INFO  : PSI-BLAST 3 iterations
09/01/2012 12:06:10 : INFO  : PSI-BLAST 5 iterations
09/01/2012 12:06:43 : INFO  : Finished PSI-BLAST
09/01/2012 12:06:44 : INFO  : Running Buildali to generate a3m file
09/01/2012 12:09:20 : INFO  : Converting to HMM
09/01/2012 12:09:21 : INFO  : Calibrating HMM
09/01/2012 12:09:26 : INFO  : Searching HMM database
09/01/2012 12:12:17 : INFO  : Finished buildali
09/01/2012 12:12:17 : INFO  : Predicting secondary structure
09/01/2012 12:12:20 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 12:12:21 : INFO  : Predicting Disordered regions
09/01/2012 12:12:22 : INFO  : Predicted Disorder (Disopred)
09/01/2012 12:12:22 : INFO  : Running memsat_svm check
09/01/2012 12:14:52 : INFO  : Globular protein
09/01/2012 12:14:52 : INFO  : Predicted Transmembrane (memsat_svm) ID '87303bd1c7a2df11'
09/01/2012 12:14:53 : INFO  : Initialising fold library search
09/01/2012 12:14:54 : INFO  : Initialised search input
09/01/2012 12:14:54 : INFO  : Building Ensemble models
09/01/2012 12:14:56 : INFO  : Building hh.c2jrmA_.model.1.pdb
09/01/2012 12:15:00 : INFO  : Building c2jrmA_.1.pdb
09/01/2012 12:15:04 : INFO  : Building c2ae3A_.2.pdb
09/01/2012 12:15:09 : INFO  : Building c2khgA_.3.pdb
09/01/2012 12:15:13 : INFO  : Building d2ijra1.4.pdb
09/01/2012 12:15:18 : INFO  : Building c2wybA_.5.pdb
09/01/2012 12:15:23 : INFO  : Building d2fxta1.6.pdb
09/01/2012 12:15:27 : INFO  : Building c3l32B_.7.pdb
09/01/2012 12:15:32 : INFO  : Building d1erpa_.8.pdb
09/01/2012 12:15:36 : INFO  : Building c1ry3A_.9.pdb
09/01/2012 12:15:40 : INFO  : Building c1gk9A_.10.pdb
09/01/2012 12:15:46 : INFO  : Building c2khfA_.11.pdb
09/01/2012 12:15:50 : INFO  : Building d1ejab_.12.pdb
09/01/2012 12:15:54 : INFO  : Building c2a9fB_.13.pdb
09/01/2012 12:15:59 : INFO  : Building c3k3wA_.14.pdb
09/01/2012 12:16:03 : INFO  : Building d1q8ha_.15.pdb
09/01/2012 12:16:07 : INFO  : Building c1q8hA_.16.pdb
09/01/2012 12:16:12 : INFO  : Building c1ajnA_.17.pdb
09/01/2012 12:16:17 : INFO  : Building c1cw5A_.18.pdb
09/01/2012 12:16:21 : INFO  : Building d2cw9a1.19.pdb
09/01/2012 12:16:25 : INFO  : Building d1j09a2.20.pdb
09/01/2012 12:16:37 : INFO  : Finished HH model building
09/01/2012 12:16:37 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 12:17:44 : INFO  : html domain output complete ID '87303bd1c7a2df11'
09/01/2012 12:20:01 : INFO  : Run end  : Mon Jan  9 12:20:01 GMT 2012
