Phyre 2 alignment of P11289 with c3nv9A_

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Job Description | P11289
Confidence | 1.95% | Date | Thu Jan 5 11:32:32 GMT 2012
Rank | 38 | Aligned Residues | 22
% Identity | 27% | Template | c3nv9A_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:malic enzyme; | PDBTitle: crystal structure of entamoeba histolytica malic enzyme
Resolution | 2.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 75 | . | . | . | . | 80 | . | . | . | . | . | . |  |  |  |  | . |  | . | . | 90 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | . |  |  |  |  |  |  |  |  |
Query Sequence |  | C | Q | T | D | F | T | Y | A | R | G | L | S | . | . | . | . | G | . | K | S | F | P | A | S | C | N | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | Y | P | Y | E | A | K | E | A | G | A | Y | I | V | A | T | G | R | G | D | F | P | N | Q | V | N | N
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  | S |  | T | T | S | S | S | B |  |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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