BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (204 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacte... 416 e-115 UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serrati... 247 1e-64 UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria Re... 233 4e-60 UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citro... 232 6e-60 UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinom... 163 4e-39 UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylo... 162 7e-39 UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_... 132 7e-30 UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudom... 118 1e-25 UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacte... 115 1e-24 UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei A... 101 1e-20 UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus ... 92 1e-17 UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus... 90 6e-17 UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces ur... 84 3e-15 UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=... 79 7e-14 UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=... 76 8e-13 UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=L... 72 1e-11 UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avi... 64 2e-09 UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATC... 64 4e-09 UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacte... 63 5e-09 UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus... 62 1e-08 UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=L... 60 6e-08 >UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacteria RepID=YAGU_ECO57 Length = 204 Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust. Identities = 204/204 (100%), Positives = 204/204 (100%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA Sbjct: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV Sbjct: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 Query: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE Sbjct: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 Query: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 IIRRDLRNRITHEPDPEIPLGSNR Sbjct: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 >UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RTE9_SEROD Length = 187 Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 126/201 (62%), Positives = 150/201 (74%), Gaps = 21/201 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 + F QTP RRRYG+A F+G+IAG++SAFVKWGAEVPLPPR+ +D Sbjct: 5 DFFVQTPLERRRYGVALFVGVIAGLLSAFVKWGAEVPLPPRTILD--------------- 49 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R NPPY+FLRD+LG+ DP A VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 50 -----GRAEFNPPYLFLRDYLGI-DPTATVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 EVFPK+KLWQG+LAG +A + VH ISFPL+GLTPPL LP E VSEI GH WFW+IE+ Sbjct: 104 EVFPKVKLWQGVLAGLIATVCVHGISFPLLGLTPPLSMLPVEEYVSEILGHAFWFWAIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGS 202 +RRDLRNRITH+PD E+PL S Sbjct: 164 VRRDLRNRITHQPDAEVPLSS 184 >UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria RepID=B4TT31_SALSV Length = 185 Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 117/202 (57%), Positives = 141/202 (69%), Gaps = 21/202 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 +F +T P RRRYG+AA IG AG++SAFVKWGAEVPLPPR+ Sbjct: 5 GLFVKTDPQRRRYGVAALIGFAAGIISAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPYIFLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 47 --FSGGRDEFNPPYIFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + LTPPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGILAGLIVTVVVHGIFCPALNLTPPLTQLPFDEYASEILGHVFWFWVIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGSN 203 +RRDLRNRITHEPD E+PL + Sbjct: 164 MRRDLRNRITHEPDAEVPLTTR 185 >UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F16E6 Length = 186 Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 116/203 (57%), Positives = 142/203 (69%), Gaps = 21/203 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 ++F +TP RRRYG+A +G+++GV+SAFVKWGAEVPLPPR+ Sbjct: 5 DLFTRTPTERRRYGIAVLVGIVSGVLSAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPY+FLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFAVGYCV A Sbjct: 47 --FSLGRDEFNPPYLFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAVGYCVAA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + L+PPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGVLAGLIVTVAVHGIFIPALHLSPPLSQLPFDEYASEIIGHIFWFWVIEM 163 Query: 182 IRRDLRNRITHEPDPEIPLGSNR 204 IRRDLRNRITHEPD EIPL R Sbjct: 164 IRRDLRNRITHEPDAEIPLSLVR 186 >UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBB3_9ACTO Length = 184 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 93/201 (46%), Positives = 119/201 (59%), Gaps = 26/201 (12%) Query: 6 QTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQID 65 QT P RRRYG+AA G++ G+VSA VK+G EVPLPPR+P Sbjct: 5 QTNPKRRRYGVAALAGVLGGIVSAIVKFGWEVPLPPRTP--------------------- 43 Query: 66 CSRNFLNPPYIFLRDWLGLTDPNAAV-YTFAGHV-FNWVG-VTHIIFSIVFAVGYCVVAE 122 RN NPP L+ LGL + + YT+ G+ WV + H FSI FAV YCV+AE Sbjct: 44 -ERNATNPPQELLQQ-LGLPESVTHLSYTYNGNEGLPWVSFIVHFAFSIGFAVLYCVLAE 101 Query: 123 VFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 FP+IKLWQG G + H++ PLMG P ++ P+ E+ SE GH++W W+IE+ Sbjct: 102 RFPQIKLWQGAAFGIFVYVAFHVVLMPLMGTVPAPWNQPFAEHFSEFLGHIIWLWAIEVF 161 Query: 183 RRDLRNRITHEPDPEIPLGSN 203 RRD+RNRITHEPD E PL S Sbjct: 162 RRDMRNRITHEPDAEFPLESR 182 >UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylobacter RepID=A7GXI8_CAMC5 Length = 184 Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 87/192 (45%), Positives = 115/192 (59%), Gaps = 19/192 (9%) Query: 7 TPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDC 66 T P +RRYGL IG++AGV A VKWG EVP PPR+P F +D Sbjct: 4 TDPAKRRYGLMFLIGILAGVFGAIVKWGWEVPFPPRNPNVFF--------------PVDA 49 Query: 67 SRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNW-VGVTHIIFSIVFAVGYCVVAEVFP 125 + PP IFL TD Y F+G + + H++FS+VF V YCV+AE +P Sbjct: 50 MER-VTPPKIFLEQIGAATD---WTYVFSGVTQPLSIFIVHVLFSVVFGVMYCVIAEAWP 105 Query: 126 KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRD 185 +IK+WQG + G + H+I+ PLM PPL ++P+ EN SE FGH+VW W +EI+RRD Sbjct: 106 RIKMWQGAVFGIAVYVLAHVIAMPLMKEVPPLSEIPFDENCSEFFGHIVWLWGMEIVRRD 165 Query: 186 LRNRITHEPDPE 197 +RNR+T EPDPE Sbjct: 166 IRNRVTKEPDPE 177 >UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_PROAC Length = 255 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 109/202 (53%), Gaps = 33/202 (16%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 M++ T RR +AA +G++AG+ SA VK+G EVP PPR+P Sbjct: 71 MSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTP---------------- 114 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG------VTHIIFSIVFA 114 RN NPP L LG +D A + FN G + H F+I F Sbjct: 115 ------ERNATNPPQQLLEQ-LGFSDHFAHTLVY----FNGNGLPVMSFIIHFGFAIFFG 163 Query: 115 VGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLV 174 V YCV AE FPKI LWQG+ G + + H+I P +G P + PW E++SE+ GH+V Sbjct: 164 VAYCVGAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIV 223 Query: 175 WFWSIEIIRRDLRNRITHEPDP 196 W WSIE++RRDLR+RIT EPDP Sbjct: 224 WMWSIEVVRRDLRSRITGEPDP 245 >UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudomonas syringae group RepID=Q4ZYE8_PSEU2 Length = 164 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 27/181 (14%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N R YG+AA G + G VS+F+KWG E+P PPR+P + P ++ + G Sbjct: 2 NTRAYGVAALAGFVGGNVSSFIKWGTEIPFPPRTP----DRPVPPVEMLDSLG------- 50 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNW-VGVTHIIFSIVFAVGYCVVAEVFPKIK 128 + Y ++ HV N+ + H FSI FA+ YC++ +P+ Sbjct: 51 ---------------INAQQLTYVYSEHVVNYGSALVHHGFSIFFAMFYCLLVLRYPRAA 95 Query: 129 LWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 LWQGL G L L H + P PPL++LP E +SE FGHL+W W IE+IRRDL+ Sbjct: 96 LWQGLGFGLLVTLGFHGVIMPAFHWAPPLWELPASELLSETFGHLLWMWVIEVIRRDLQQ 155 Query: 189 R 189 R Sbjct: 156 R 156 >UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacteriaceae RepID=C2LPJ5_PROMI Length = 173 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 27/198 (13%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 +++F+ T + R G+A ++G+IAG+ SA VK G E +PPR+ Sbjct: 2 IDLFKLTKKSSRHIGIAIYVGIIAGIFSALVKSGFEDLIPPRTLET-------------- 47 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCV 119 PP + L + LGL + + Y + G+ NW G HI+FSIV AV YCV Sbjct: 48 -----------TPPPVVLLEKLGL-NIDTMTYHWMGYSINWGGNGVHILFSIVIAVTYCV 95 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 +AE PK+KL G+ G +F H + PL+GL+ L+ + +SE G W WSI Sbjct: 96 IAEFLPKVKLLHGICFGIGVSVFAHGLVVPLLGLSGWLWTAGYQALISEFVGTAFWIWSI 155 Query: 180 EIIRRDLRNRITHEPDPE 197 E IR++LR +T E D E Sbjct: 156 EAIRQNLRYCLTKENDAE 173 >UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UW73_YERRO Length = 175 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 102/199 (51%), Gaps = 29/199 (14%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 N+FE T N R LA +IG+IAG+ SA VK G E LPPR+ M Sbjct: 3 NVFELTKKNTRHVSLAIYIGVIAGIFSALVKSGFETILPPRTAETM-------------- 48 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLT-DPNAAVYTFAGHVFNWVGV-THIIFSIVFAVGYCV 119 PP + L + LG+ DP Y + + NW G HIIFSIV A+ YCV Sbjct: 49 -----------PPPVVLLEKLGVNIDP--MTYHWMDYSLNWGGNGVHIIFSIVIAIIYCV 95 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 +AE PK+K+ G++ G +F H + PL+GL+ L+ +SE G W WSI Sbjct: 96 IAEYLPKVKMLHGIIFGIGVSVFAHGLVVPLLGLSGWLWVAGPEALISEFVGTAFWIWSI 155 Query: 180 EIIRRDLRNRITHEPDPEI 198 E IR++LR +T PD E+ Sbjct: 156 EAIRQNLRYTLTKGPDAEL 174 >UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus RepID=C0WRT7_LACBU Length = 187 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 23/171 (13%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 A G++AG +S VK G E LPPR+P R+ NPP Sbjct: 31 AVKAGMVAGFLSGLVKLGWEDVLPPRTP----------------------QRDATNPPQA 68 Query: 77 FLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L + T + YT++ WV + H FS FAVGY V+ V P ++L G LA Sbjct: 69 MLEKFGVPTSITHSTYTYSEQKMPWVSFIIHFGFSTTFAVGYSVMQHVIPPVRLGHGALA 128 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 G H+ P MGLTP DLP E VSE GH+ W +I+++ L Sbjct: 129 GLGPWGAFHLGVLPKMGLTPDAKDLPIEEQVSEALGHIAWMSTIDLVSNAL 179 >UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus epidermidis RepID=C5QVK9_STAEP Length = 167 Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 26/181 (14%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N+ R+ L G+IAG++S VK G EV PPR+P SRN Sbjct: 6 NQSRFKLL-IAGIIAGLLSGVVKLGWEVMFPPRTP----------------------SRN 42 Query: 70 FLNPPYIFLRDWLGL-TDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKI 127 NPP L+ LG+ +D Y F+ H W+ + H FSIV A+ Y +A+ + KI Sbjct: 43 ATNPPQQLLQ-LLGIPSDITHLTYNFSEHALPWISFIVHYSFSIVIAIIYIYIAKKYTKI 101 Query: 128 KLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLR 187 L G L G + + H+I P+M + P FD P+ E++SE FGH+VW IE++RR Sbjct: 102 TLGYGALFGIVIWIVFHLILMPIMHVVPNAFDQPFSEHLSEFFGHIVWMMVIEMVRRYFY 161 Query: 188 N 188 N Sbjct: 162 N 162 >UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8V5_9ACTO Length = 175 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 80/172 (46%), Gaps = 25/172 (14%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 AA + ++AG+VS VK G E LPPR+P R+ NPP + Sbjct: 22 AAGVSMLAGLVSGMVKIGWEAALPPRTP----------------------ERDDPNPP-M 58 Query: 77 FLRDWLGL-TDPNAAVYTFAGHVFNWVGVT-HIIFSIVFAVGYCVVAEVFPKIKLWQGLL 134 L + LG+ + A TF + G+ H FS+ AV YCV A P I G + Sbjct: 59 HLLEQLGIPAEVREATVTFNENQVPVTGLAVHHAFSVAMAVPYCVAARRCPAITAGGGAV 118 Query: 135 AGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 G H+ P +G P + PW E++SE GH+VW WSIE +RR L Sbjct: 119 YGLGVWAGFHLGLLPALGTVPAATEQPWQEHMSEAAGHVVWAWSIEAVRRAL 170 >UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=Lactobacillales RepID=Q03ZW5_LEUMM Length = 179 Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 30/168 (17%) Query: 19 FIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFL 78 F G IAG++S VK G E LPPR+ +RN NPP + Sbjct: 20 FYGFIAGMISGMVKIGWENILPPRT----------------------LARNATNPPQ-HM 56 Query: 79 RDWLGLTDPNAAVYTFAGH-----VFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGL 133 + LG+ P+ V++F + VF + + H F+I FA+ Y V++ + K+ LWQG Sbjct: 57 AEQLGI--PSKLVHSFFYYSQDQKVFWFTLILHFSFAIAFAILYVFVSQYWSKVALWQGA 114 Query: 134 LAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 G + H+I P G P ++ P E++SE FGH+VW WSI + Sbjct: 115 AYGIFLWILWHIIIMPAFGTIPAPWNQPLDEHISEFFGHIVWAWSIAV 162 >UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=Bacilli RepID=Q040L1_LACGA Length = 170 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 74/175 (42%), Gaps = 28/175 (16%) Query: 21 GLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRD 80 G AGV+S VK G E LPPR+P RN NPP L Sbjct: 14 GTAAGVISGLVKLGWENILPPRTP----------------------ERNKTNPPQKLLEQ 51 Query: 81 WLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPK-IKLWQGLLAGAL 138 A YT++G WV + H FSI FA Y + E K + + QG+ G Sbjct: 52 MGVPAKLTHATYTYSGEKLPWVSYLVHFGFSISFATAYAALLEKKIKWLTVDQGVPFGLA 111 Query: 139 AQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWS----IEIIRRDLRNR 189 + H++ PLM P D P E++SE GH+ W W+ EI+ + L R Sbjct: 112 VWIAFHLVIMPLMKTVPSPKDQPLEEHISEALGHIAWMWTNNEIAEIVLKQLGQR 166 >UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=Lactobacillus RepID=Q03TL9_LACBA Length = 173 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 23/165 (13%) Query: 30 FVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNA 89 FVK G E LPPR+ +A PE+L++ G D N Sbjct: 27 FVKLGWENVLPPRTAKR--DAVNPPETLMKQVGIPDSILN-------------------- 64 Query: 90 AVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISF 148 A Y ++GH W G V H FS FAV Y ++ E P IK G G + H+ Sbjct: 65 ASYHYSGHEIPWAGFVIHFGFSTTFAVLYQILGEKVPAIKKDAGTWFGLAIWVAFHLGIM 124 Query: 149 PLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHE 193 P MG P + P E++SE GH+VW + +++ D+ R+T + Sbjct: 125 PAMGTVPTAKEQPKDEHISEALGHIVWMVTNDLVGTDVYRRLTQQ 169 >UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avium 197N RepID=Q2KVD1_BORA1 Length = 167 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 10/111 (9%) Query: 86 DPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGL-LAGALAQLFV 143 D + Y F NW G HI+FS+V A Y + EV K+ +W GL A A + Sbjct: 61 DAGSMNYAFNQAAVNWGGNGVHILFSMVMAFVYVRLMEVCSKVGIWWGLPFAWLTATIGA 120 Query: 144 HMISFPLMGLTPPLFDLPWYENV----SEIFGHLVWFWSIEIIRRDLRNRI 190 H I FPL+G+ P LPW+ V SE FG +W W+IE +RR L ++ Sbjct: 121 HGIVFPLLGIGP----LPWHIGVDAYISEFFGTALWIWTIECMRRVLLRKV 167 >UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XF75_9HELI Length = 173 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 29/187 (15%) Query: 13 RYGLAAFIGLIAGVVSAFVKWGAEV--PLPPRSPVDMFNAACGPESLIRAAGQIDC-SRN 69 R ++ FIG+I G + + V+ G EV PL + P+D E ++ Q+ C N Sbjct: 12 RVWISLFIGVIVGSIGSVVRIGWEVLFPLSLQMPLD-----SNAEYIL----QLLCIDLN 62 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKL 129 L+ Y+F + + VY V +FSI F++ Y + AE + K+K Sbjct: 63 LLSLKYVFSDGY-----EWSVVYL----------VWQFLFSIFFSLFYILFAEFWQKLKF 107 Query: 130 WQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNR 189 G+ G + L V+++ PL G +Y V L+W W IE+ RRDLRNR Sbjct: 108 AHGIFYGIMLWLCVYVLFLPLCGFVRVDSMFSYY--VCSFIESLLWIWIIELTRRDLRNR 165 Query: 190 ITHEPDP 196 ITHE DP Sbjct: 166 ITHERDP 172 >UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacteria RepID=D2T631_ERWPY Length = 188 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 36/184 (19%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N+ + + LI G +S+ VK G E +PPR AG+I Sbjct: 7 NKINLKIIVWSTLIGGFISSLVKSGTEANMPPR-----------------IAGEI----- 44 Query: 70 FLNPPYIFLRDWLGLTDPNAAV--YTFAGHVF-NWVGVTHIIFSIVFAVGYCVVAEVFPK 126 +PP + WLG NA Y + G V + H +FS FA Y +++ +PK Sbjct: 45 --SPPAAHIDAWLGPLGINAHSMDYVYQGITIPGAVMLYHWLFSFAFAFAYVLLSAFWPK 102 Query: 127 IKLWQGLLAGALAQLFVHMISFPLMGLTPP---------LFDLPWYENVSEIFGHLVWFW 177 ++LW G G + + +H P +G P L+DL YE SEI GH+ W Sbjct: 103 VRLWYGAAYGLIITIAMHGFLIPALGFRHPAYSGGKIGWLWDLNGYELWSEITGHIAWSV 162 Query: 178 SIEI 181 SIE+ Sbjct: 163 SIEV 166 >UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus RepID=B9CPR6_STACP Length = 158 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 47/82 (57%) Query: 106 HIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYEN 165 H FSI A Y ++AE + K+ + +G L G + H P +GLTP + +LP E Sbjct: 77 HYGFSIAHAFAYAILAERYSKVTVLRGSLFGIAINIAFHEYLLPRVGLTPEIDELPKEER 136 Query: 166 VSEIFGHLVWFWSIEIIRRDLR 187 +SE+ GH+VW +I+ +R L+ Sbjct: 137 ISELLGHIVWMNAIDYVRSALK 158 >UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=Lactobacillales RepID=Q03VE2_LEUMM Length = 167 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 26/166 (15%) Query: 20 IGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLR 79 IG IAGV+S VK G E LPPR+ R+ NPP L+ Sbjct: 11 IGTIAGVISGMVKIGWEAILPPRTQ----------------------ERDETNPPQRLLQ 48 Query: 80 DWLGLTDP--NAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAG 136 +G+ +A Y ++V + H FSI F V ++ + FP + QG + G Sbjct: 49 Q-MGIPRKWTHAYFYYATDQKVHYVALIMHFSFSIAFGVLLVLLDQYFPIVTFGQGSVYG 107 Query: 137 ALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 + + H+I P P P+ E+ SE GH+VW WS+ +I Sbjct: 108 VVIWIIFHIIILPATKTIPSALKQPFSEHFSEFLGHIVWGWSMYLI 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacte... 284 1e-75 UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria Re... 242 5e-63 UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citro... 240 2e-62 UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serrati... 238 1e-61 UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinom... 234 1e-60 UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylo... 206 3e-52 UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacte... 193 4e-48 UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_... 190 3e-47 UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus ... 175 7e-43 UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei A... 172 7e-42 UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudom... 171 1e-41 UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=... 168 8e-41 UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces ur... 167 2e-40 UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus... 166 3e-40 UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=L... 162 9e-39 UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=... 159 7e-38 UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=L... 134 1e-30 UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATC... 132 5e-30 UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus... 132 7e-30 UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacte... 131 1e-29 UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avi... 118 1e-25 Sequences not found previously or not previously below threshold: UniRef50_Q027J2 Putative uncharacterized protein n=1 Tax=Candida... 55 2e-06 UniRef50_A0M772 Putative uncharacterized protein n=3 Tax=Flavoba... 52 1e-05 UniRef50_C1CZF3 Putative uncharacterized protein n=1 Tax=Deinoco... 50 5e-05 UniRef50_C6E5D4 Putative uncharacterized protein n=4 Tax=Geobact... 46 6e-04 UniRef50_Q11CJ5 Putative uncharacterized protein n=1 Tax=Chelati... 44 0.003 UniRef50_A5FBU6 Putative uncharacterized protein n=1 Tax=Flavoba... 44 0.003 UniRef50_B1ZM97 Putative uncharacterized protein n=1 Tax=Opitutu... 42 0.013 UniRef50_C6CU03 Putative uncharacterized protein n=1 Tax=Paeniba... 42 0.014 UniRef50_C6J3S2 Putative uncharacterized protein n=1 Tax=Paeniba... 41 0.017 UniRef50_B4R8Y4 Putative uncharacterized protein n=1 Tax=Phenylo... 41 0.018 UniRef50_D2BFQ4 Putative uncharacterized protein n=1 Tax=Strepto... 41 0.032 UniRef50_B9XGQ4 Putative uncharacterized protein n=1 Tax=bacteri... 41 0.038 UniRef50_D1C789 Putative uncharacterized protein n=1 Tax=Sphaero... 40 0.046 UniRef50_C1D019 Putative uncharacterized protein n=1 Tax=Deinoco... 40 0.046 UniRef50_UPI000178961E hypothetical protein GYMC10_2085 n=1 Tax=... 40 0.064 UniRef50_A5V1T3 Putative uncharacterized protein n=4 Tax=Roseifl... 39 0.066 UniRef50_B6IU58 Putative uncharacterized protein n=1 Tax=Rhodosp... 39 0.094 >UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacteria RepID=YAGU_ECO57 Length = 204 Score = 284 bits (727), Expect = 1e-75, Method: Composition-based stats. Identities = 204/204 (100%), Positives = 204/204 (100%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA Sbjct: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV Sbjct: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 Query: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE Sbjct: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 Query: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 IIRRDLRNRITHEPDPEIPLGSNR Sbjct: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 >UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria RepID=B4TT31_SALSV Length = 185 Score = 242 bits (618), Expect = 5e-63, Method: Composition-based stats. Identities = 117/202 (57%), Positives = 141/202 (69%), Gaps = 21/202 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 +F +T P RRRYG+AA IG AG++SAFVKWGAEVPLPPR+ Sbjct: 5 GLFVKTDPQRRRYGVAALIGFAAGIISAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPYIFLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 47 --FSGGRDEFNPPYIFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + LTPPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGILAGLIVTVVVHGIFCPALNLTPPLTQLPFDEYASEILGHVFWFWVIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGSN 203 +RRDLRNRITHEPD E+PL + Sbjct: 164 MRRDLRNRITHEPDAEVPLTTR 185 >UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F16E6 Length = 186 Score = 240 bits (612), Expect = 2e-62, Method: Composition-based stats. Identities = 116/203 (57%), Positives = 142/203 (69%), Gaps = 21/203 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 ++F +TP RRRYG+A +G+++GV+SAFVKWGAEVPLPPR+ Sbjct: 5 DLFTRTPTERRRYGIAVLVGIVSGVLSAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPY+FLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFAVGYCV A Sbjct: 47 --FSLGRDEFNPPYLFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAVGYCVAA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + L+PPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGVLAGLIVTVAVHGIFIPALHLSPPLSQLPFDEYASEIIGHIFWFWVIEM 163 Query: 182 IRRDLRNRITHEPDPEIPLGSNR 204 IRRDLRNRITHEPD EIPL R Sbjct: 164 IRRDLRNRITHEPDAEIPLSLVR 186 >UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RTE9_SEROD Length = 187 Score = 238 bits (607), Expect = 1e-61, Method: Composition-based stats. Identities = 126/201 (62%), Positives = 150/201 (74%), Gaps = 21/201 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 + F QTP RRRYG+A F+G+IAG++SAFVKWGAEVPLPPR+ +D Sbjct: 5 DFFVQTPLERRRYGVALFVGVIAGLLSAFVKWGAEVPLPPRTILD--------------- 49 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R NPPY+FLRD+LG+ DP A VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 50 -----GRAEFNPPYLFLRDYLGI-DPTATVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 EVFPK+KLWQG+LAG +A + VH ISFPL+GLTPPL LP E VSEI GH WFW+IE+ Sbjct: 104 EVFPKVKLWQGVLAGLIATVCVHGISFPLLGLTPPLSMLPVEEYVSEILGHAFWFWAIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGS 202 +RRDLRNRITH+PD E+PL S Sbjct: 164 VRRDLRNRITHQPDAEVPLSS 184 >UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBB3_9ACTO Length = 184 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 90/200 (45%), Positives = 114/200 (57%), Gaps = 24/200 (12%) Query: 6 QTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQID 65 QT P RRRYG+AA G++ G+VSA VK+G EVPLPPR+P Sbjct: 5 QTNPKRRRYGVAALAGVLGGIVSAIVKFGWEVPLPPRTP--------------------- 43 Query: 66 CSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHV-FNWVG-VTHIIFSIVFAVGYCVVAEV 123 RN NPP L+ YT+ G+ WV + H FSI FAV YCV+AE Sbjct: 44 -ERNATNPPQELLQQLGLPESVTHLSYTYNGNEGLPWVSFIVHFAFSIGFAVLYCVLAER 102 Query: 124 FPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIR 183 FP+IKLWQG G + H++ PLMG P ++ P+ E+ SE GH++W W+IE+ R Sbjct: 103 FPQIKLWQGAAFGIFVYVAFHVVLMPLMGTVPAPWNQPFAEHFSEFLGHIIWLWAIEVFR 162 Query: 184 RDLRNRITHEPDPEIPLGSN 203 RD+RNRITHEPD E PL S Sbjct: 163 RDMRNRITHEPDAEFPLESR 182 >UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylobacter RepID=A7GXI8_CAMC5 Length = 184 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 86/192 (44%), Positives = 114/192 (59%), Gaps = 19/192 (9%) Query: 7 TPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDC 66 T P +RRYGL IG++AGV A VKWG EVP PPR+P F Sbjct: 4 TDPAKRRYGLMFLIGILAGVFGAIVKWGWEVPFPPRNPNVFF---------------PVD 48 Query: 67 SRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNW-VGVTHIIFSIVFAVGYCVVAEVFP 125 + + PP IFL TD Y F+G + + H++FS+VF V YCV+AE +P Sbjct: 49 AMERVTPPKIFLEQIGAATD---WTYVFSGVTQPLSIFIVHVLFSVVFGVMYCVIAEAWP 105 Query: 126 KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRD 185 +IK+WQG + G + H+I+ PLM PPL ++P+ EN SE FGH+VW W +EI+RRD Sbjct: 106 RIKMWQGAVFGIAVYVLAHVIAMPLMKEVPPLSEIPFDENCSEFFGHIVWLWGMEIVRRD 165 Query: 186 LRNRITHEPDPE 197 +RNR+T EPDPE Sbjct: 166 IRNRVTKEPDPE 177 >UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacteriaceae RepID=C2LPJ5_PROMI Length = 173 Score = 193 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 27/198 (13%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 +++F+ T + R G+A ++G+IAG+ SA VK G E +PPR+ Sbjct: 2 IDLFKLTKKSSRHIGIAIYVGIIAGIFSALVKSGFEDLIPPRTL---------------- 45 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCV 119 PP + L + LGL + + Y + G+ NW G HI+FSIV AV YCV Sbjct: 46 ---------ETTPPPVVLLEKLGL-NIDTMTYHWMGYSINWGGNGVHILFSIVIAVTYCV 95 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 +AE PK+KL G+ G +F H + PL+GL+ L+ + +SE G W WSI Sbjct: 96 IAEFLPKVKLLHGICFGIGVSVFAHGLVVPLLGLSGWLWTAGYQALISEFVGTAFWIWSI 155 Query: 180 EIIRRDLRNRITHEPDPE 197 E IR++LR +T E D E Sbjct: 156 EAIRQNLRYCLTKENDAE 173 >UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_PROAC Length = 255 Score = 190 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 105/197 (53%), Gaps = 23/197 (11%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 M++ T RR +AA +G++AG+ SA VK+G EVP PPR+P Sbjct: 71 MSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTP---------------- 114 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCV 119 RN NPP L + F G+ + + H F+I F V YCV Sbjct: 115 ------ERNATNPPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCV 168 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 AE FPKI LWQG+ G + + H+I P +G P + PW E++SE+ GH+VW WSI Sbjct: 169 GAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSI 228 Query: 180 EIIRRDLRNRITHEPDP 196 E++RRDLR+RIT EPDP Sbjct: 229 EVVRRDLRSRITGEPDP 245 >UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus RepID=C0WRT7_LACBU Length = 187 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 23/173 (13%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 A G++AG +S VK G E LPPR+P R+ NPP Sbjct: 31 AVKAGMVAGFLSGLVKLGWEDVLPPRTP----------------------QRDATNPPQA 68 Query: 77 FLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L + T + YT++ WV + H FS FAVGY V+ V P ++L G LA Sbjct: 69 MLEKFGVPTSITHSTYTYSEQKMPWVSFIIHFGFSTTFAVGYSVMQHVIPPVRLGHGALA 128 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 G H+ P MGLTP DLP E VSE GH+ W +I+++ L Sbjct: 129 GLGPWGAFHLGVLPKMGLTPDAKDLPIEEQVSEALGHIAWMSTIDLVSNALYQ 181 >UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UW73_YERRO Length = 175 Score = 172 bits (435), Expect = 7e-42, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 27/198 (13%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 N+FE T N R LA +IG+IAG+ SA VK G E LPPR+ M Sbjct: 3 NVFELTKKNTRHVSLAIYIGVIAGIFSALVKSGFETILPPRTAETM-------------- 48 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVV 120 PP + L + LG+ + + Y + + NW G HIIFSIV A+ YCV+ Sbjct: 49 -----------PPPVVLLEKLGV-NIDPMTYHWMDYSLNWGGNGVHIIFSIVIAIIYCVI 96 Query: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 AE PK+K+ G++ G +F H + PL+GL+ L+ +SE G W WSIE Sbjct: 97 AEYLPKVKMLHGIIFGIGVSVFAHGLVVPLLGLSGWLWVAGPEALISEFVGTAFWIWSIE 156 Query: 181 IIRRDLRNRITHEPDPEI 198 IR++LR +T PD E+ Sbjct: 157 AIRQNLRYTLTKGPDAEL 174 >UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudomonas syringae group RepID=Q4ZYE8_PSEU2 Length = 164 Score = 171 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 69/181 (38%), Positives = 95/181 (52%), Gaps = 27/181 (14%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N R YG+AA G + G VS+F+KWG E+P PPR+P Sbjct: 2 NTRAYGVAALAGFVGGNVSSFIKWGTEIPFPPRTPDRPV--------------------- 40 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIK 128 P + + D LG+ + Y ++ HV N+ + H FSI FA+ YC++ +P+ Sbjct: 41 ----PPVEMLDSLGI-NAQQLTYVYSEHVVNYGSALVHHGFSIFFAMFYCLLVLRYPRAA 95 Query: 129 LWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 LWQGL G L L H + P PPL++LP E +SE FGHL+W W IE+IRRDL+ Sbjct: 96 LWQGLGFGLLVTLGFHGVIMPAFHWAPPLWELPASELLSETFGHLLWMWVIEVIRRDLQQ 155 Query: 189 R 189 R Sbjct: 156 R 156 >UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=Bacilli RepID=Q040L1_LACGA Length = 170 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 74/178 (41%), Gaps = 28/178 (15%) Query: 18 AFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIF 77 G AGV+S VK G E LPPR+P RN NPP Sbjct: 11 LIAGTAAGVISGLVKLGWENILPPRTP----------------------ERNKTNPPQKL 48 Query: 78 LRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPK-IKLWQGLLA 135 L A YT++G WV + H FSI FA Y + E K + + QG+ Sbjct: 49 LEQMGVPAKLTHATYTYSGEKLPWVSYLVHFGFSISFATAYAALLEKKIKWLTVDQGVPF 108 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWS----IEIIRRDLRNR 189 G + H++ PLM P D P E++SE GH+ W W+ EI+ + L R Sbjct: 109 GLAVWIAFHLVIMPLMKTVPSPKDQPLEEHISEALGHIAWMWTNNEIAEIVLKQLGQR 166 >UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8V5_9ACTO Length = 175 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 75/171 (43%), Gaps = 23/171 (13%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 AA + ++AG+VS VK G E LPPR+P R+ NPP Sbjct: 22 AAGVSMLAGLVSGMVKIGWEAALPPRTP----------------------ERDDPNPPMH 59 Query: 77 FLRDWLGLTDPNAAVYTFAGHVFNWVGV-THIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L + A TF + G+ H FS+ AV YCV A P I G + Sbjct: 60 LLEQLGIPAEVREATVTFNENQVPVTGLAVHHAFSVAMAVPYCVAARRCPAITAGGGAVY 119 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 G H+ P +G P + PW E++SE GH+VW WSIE +RR L Sbjct: 120 GLGVWAGFHLGLLPALGTVPAATEQPWQEHMSEAAGHVVWAWSIEAVRRAL 170 >UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus epidermidis RepID=C5QVK9_STAEP Length = 167 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 90/181 (49%), Gaps = 24/181 (13%) Query: 9 PNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSR 68 N+ R+ L G+IAG++S VK G EV PPR+P SR Sbjct: 5 KNQSRFKL-LIAGIIAGLLSGVVKLGWEVMFPPRTP----------------------SR 41 Query: 69 NFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKI 127 N NPP L+ +D Y F+ H W+ + H FSIV A+ Y +A+ + KI Sbjct: 42 NATNPPQQLLQLLGIPSDITHLTYNFSEHALPWISFIVHYSFSIVIAIIYIYIAKKYTKI 101 Query: 128 KLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLR 187 L G L G + + H+I P+M + P FD P+ E++SE FGH+VW IE++RR Sbjct: 102 TLGYGALFGIVIWIVFHLILMPIMHVVPNAFDQPFSEHLSEFFGHIVWMMVIEMVRRYFY 161 Query: 188 N 188 N Sbjct: 162 N 162 >UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=Lactobacillus RepID=Q03TL9_LACBA Length = 173 Score = 162 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 23/165 (13%) Query: 30 FVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNA 89 FVK G E LPPR+ R+ +NPP ++ Sbjct: 27 FVKLGWENVLPPRTAK----------------------RDAVNPPETLMKQVGIPDSILN 64 Query: 90 AVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISF 148 A Y ++GH W G V H FS FAV Y ++ E P IK G G + H+ Sbjct: 65 ASYHYSGHEIPWAGFVIHFGFSTTFAVLYQILGEKVPAIKKDAGTWFGLAIWVAFHLGIM 124 Query: 149 PLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHE 193 P MG P + P E++SE GH+VW + +++ D+ R+T + Sbjct: 125 PAMGTVPTAKEQPKDEHISEALGHIVWMVTNDLVGTDVYRRLTQQ 169 >UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=Lactobacillales RepID=Q03ZW5_LEUMM Length = 179 Score = 159 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 + F G IAG++S VK G E LPPR+ +RN NPP Sbjct: 18 SIFYGFIAGMISGMVKIGWENILPPRT----------------------LARNATNPPQH 55 Query: 77 FLRDWLGLTDPNAAVYTFAG--HVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLL 134 + + + ++ VF + + H F+I FA+ Y V++ + K+ LWQG Sbjct: 56 MAEQLGIPSKLVHSFFYYSQDQKVFWFTLILHFSFAIAFAILYVFVSQYWSKVALWQGAA 115 Query: 135 AGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 G + H+I P G P ++ P E++SE FGH+VW WSI + Sbjct: 116 YGIFLWILWHIIIMPAFGTIPAPWNQPLDEHISEFFGHIVWAWSIAVT 163 >UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=Lactobacillales RepID=Q03VE2_LEUMM Length = 167 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 26/168 (15%) Query: 18 AFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIF 77 IG IAGV+S VK G E LPPR+ R+ NPP Sbjct: 9 VVIGTIAGVISGMVKIGWEAILPPRTQ----------------------ERDETNPPQRL 46 Query: 78 LRDWLGLTDPNAAVYTF--AGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLL 134 L+ +G+ Y + ++V + H FSI F V ++ + FP + QG + Sbjct: 47 LQQ-MGIPRKWTHAYFYYATDQKVHYVALIMHFSFSIAFGVLLVLLDQYFPIVTFGQGSV 105 Query: 135 AGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 G + + H+I P P P+ E+ SE GH+VW WS+ +I Sbjct: 106 YGVVIWIIFHIIILPATKTIPSALKQPFSEHFSEFLGHIVWGWSMYLI 153 >UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XF75_9HELI Length = 173 Score = 132 bits (333), Expect = 5e-30, Method: Composition-based stats. Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 23/184 (12%) Query: 13 RYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLN 72 R ++ FIG+I G + + V+ G EV P + + + A L+ N L+ Sbjct: 12 RVWISLFIGVIVGSIGSVVRIGWEVLFPLSLQMPLDSNAEYILQLLCI------DLNLLS 65 Query: 73 PPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQG 132 Y+F + + VY V +FSI F++ Y + AE + K+K G Sbjct: 66 LKYVFSDGY-----EWSVVYL----------VWQFLFSIFFSLFYILFAEFWQKLKFAHG 110 Query: 133 LLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITH 192 + G + L V+++ PL G +Y V L+W W IE+ RRDLRNRITH Sbjct: 111 IFYGIMLWLCVYVLFLPLCGFVRVDSMFSYY--VCSFIESLLWIWIIELTRRDLRNRITH 168 Query: 193 EPDP 196 E DP Sbjct: 169 ERDP 172 >UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus RepID=B9CPR6_STACP Length = 158 Score = 132 bits (331), Expect = 7e-30, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 23/168 (13%) Query: 21 GLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRD 80 GL+ G + +K G E R PP L Sbjct: 13 GLVGGFIGGAIKMGWEAL----------------------VPPRTPEREEEPPPMTLLNQ 50 Query: 81 WLGLTDPNAAVYTFAGHVFN-WVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALA 139 A Y + + V H FSI A Y ++AE + K+ + +G L G Sbjct: 51 LGLPEKIKHATYNYNQNEIPIAVMGIHYGFSIAHAFAYAILAERYSKVTVLRGSLFGIAI 110 Query: 140 QLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLR 187 + H P +GLTP + +LP E +SE+ GH+VW +I+ +R L+ Sbjct: 111 NIAFHEYLLPRVGLTPEIDELPKEERISELLGHIVWMNAIDYVRSALK 158 >UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacteria RepID=D2T631_ERWPY Length = 188 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 36/184 (19%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N+ + + LI G +S+ VK G E +PPR Sbjct: 7 NKINLKIIVWSTLIGGFISSLVKSGTEANMPPRIAG------------------------ 42 Query: 70 FLNPPYIFLRDWLGLTDPNAAV--YTFAGHVFN-WVGVTHIIFSIVFAVGYCVVAEVFPK 126 ++PP + WLG NA Y + G V + H +FS FA Y +++ +PK Sbjct: 43 EISPPAAHIDAWLGPLGINAHSMDYVYQGITIPGAVMLYHWLFSFAFAFAYVLLSAFWPK 102 Query: 127 IKLWQGLLAGALAQLFVHMISFPLMGL---------TPPLFDLPWYENVSEIFGHLVWFW 177 ++LW G G + + +H P +G L+DL YE SEI GH+ W Sbjct: 103 VRLWYGAAYGLIITIAMHGFLIPALGFRHPAYSGGKIGWLWDLNGYELWSEITGHIAWSV 162 Query: 178 SIEI 181 SIE+ Sbjct: 163 SIEV 166 >UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avium 197N RepID=Q2KVD1_BORA1 Length = 167 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 28/182 (15%) Query: 11 RRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNF 70 + + G+ AG +SA VK G E L R G + Sbjct: 12 KHSLSVLIGFGIWAGFLSALVKSGVETLL-----------------PPRPPGAVPPPIGL 54 Query: 71 LNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKL 129 LN L D + Y F NW G HI+FS+V A Y + EV K+ + Sbjct: 55 LN---------LMGFDAGSMNYAFNQAAVNWGGNGVHILFSMVMAFVYVRLMEVCSKVGI 105 Query: 130 WQGLLA-GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 W GL A + H I FPL+G+ P + + +SE FG +W W+IE +RR L Sbjct: 106 WWGLPFAWLTATIGAHGIVFPLLGIGPLPWHIGVDAYISEFFGTALWIWTIECMRRVLLR 165 Query: 189 RI 190 ++ Sbjct: 166 KV 167 >UniRef50_Q027J2 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027J2_SOLUE Length = 168 Score = 54.8 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 24/177 (13%) Query: 11 RRRYGLAAFIGLIAGVVSAF---VKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCS 67 +R+ + ++G+ AG++ + G A +S + G Sbjct: 4 QRKRRINPWVGMAAGLIGGLAGSIAIG----------KFNHAWAKATKSKLEEEGTDSTV 53 Query: 68 RNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKI 127 + L L + A H F Y A + P++ Sbjct: 54 KAASAVSEGVLNHQLTPDEKPTA-----------AAAVHYGFGSTMGALYGAGAALKPEV 102 Query: 128 KLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRR 184 GL GA L H + P +G + P+ + + + E+ GH+V+ ++ RR Sbjct: 103 GGAAGLPFGAGVYLAAHAAAVPALGWSRPITQNRFSDEIGELLGHVVYGLVTDLTRR 159 >UniRef50_A0M772 Putative uncharacterized protein n=3 Tax=Flavobacteriaceae RepID=A0M772_GRAFK Length = 169 Score = 51.7 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 29/191 (15%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESL-IR 59 ++ F Q G + G+ VK E LP R + L ++ Sbjct: 3 VSTFLQKDSYMSNTSRGLISGFVGGLAGTAVKTLIEQFLPVRKIEQSSAQIKIIDDLSVK 62 Query: 60 AAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCV 119 G N + G S+ A GY Sbjct: 63 ITGTPVSIENEALAEQLVNIPMGG--------------------------SLGAAYGYGK 96 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 ++ G+ GA H S P++GL P D+P ++E+F H+ + Sbjct: 97 KERY--GLRPMDGIAFGATTWASTHETSLPILGLEPKPTDVPIRMQMNELFAHVAFGVVT 154 Query: 180 EIIRRDLRNRI 190 E++R + +I Sbjct: 155 EVVRHYVDKQI 165 >UniRef50_C1CZF3 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZF3_DEIDV Length = 180 Score = 49.8 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%) Query: 100 NWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFD 159 W H ++ Y V+ ++ QG + GA + I + L+ P Sbjct: 78 PWGVAAHFALGVLPGALYGVLRHRVKELPKAQGFVYGAGLFVLNDEIVNAALKLSGPPQA 137 Query: 160 LPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGS 202 PW +V + H+V + + R + + P ++ + Sbjct: 138 YPWQAHVRGLVSHIVLGMVTDAVLRVMDRELHPVPVEQVSRST 180 >UniRef50_C6E5D4 Putative uncharacterized protein n=4 Tax=Geobacter RepID=C6E5D4_GEOSM Length = 171 Score = 46.3 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 22/176 (12%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 RR G+ AG+V+ V +E L D + + Sbjct: 11 ERRHP---ILTGMAAGLVAGTVAGASERLL------DRLVSKKQKRRDRKVREGSAHQVA 61 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFA-GHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK 128 L L + A F + W G+ H + + FP + Sbjct: 62 GPRFASKLLGRRLDPQEKRRANLAFGVAYGLGW-GLIHSG-----------LRKRFPLLG 109 Query: 129 LWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRR 184 W GL + P + L+P L +PW + E+ H+ W + E + R Sbjct: 110 RWGGLPFAIPFFFACDGVIAPALRLSPRLDRVPWQPSAKEMGNHIAWSAAAEWVHR 165 >UniRef50_Q11CJ5 Putative uncharacterized protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CJ5_MESSB Length = 164 Score = 44.0 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 5/74 (6%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 + H F + Y + P G+L G + P +G+ P P Sbjct: 59 TLLAHFGFGALAGGIYACLTPRRP-----NGVLYGLAVWAGSYFGWIPALGMLKPATRHP 113 Query: 162 WYENVSEIFGHLVW 175 N+ + H++W Sbjct: 114 AARNLLMLAAHVIW 127 >UniRef50_A5FBU6 Putative uncharacterized protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBU6_FLAJ1 Length = 154 Score = 44.0 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 92 YTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQGLLAGALAQLFVHMISF 148 YT + + + H ++VFA Y + FP ++ L GL+ G + +++I Sbjct: 53 YTNGSQMAFYGLLLHYFIALVFAYLYFKIYPYFPILRKSFLLSGLIYGLFVWIVMNLIVL 112 Query: 149 PLM--GLTPPLFDLP 161 P++ L P FD P Sbjct: 113 PIVFPKLPPKQFDFP 127 >UniRef50_B1ZM97 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZM97_OPITP Length = 167 Score = 41.7 bits (96), Expect = 0.013, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 5/102 (4%) Query: 76 IFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQG 132 + + + A Y+ A + H + + + A Y ++ ++ G Sbjct: 53 VHVMQSVAGGLLGRATYSGAAASASLGVALHFLIAFIIAAIYVALSRKAAALRERPFVFG 112 Query: 133 LLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLV 174 L GA A + + MI PL P + P + GH+V Sbjct: 113 ALYGAGAYVVMQMIVLPLSAWHSPFW--PPNVALIPFIGHIV 152 >UniRef50_C6CU03 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CU03_PAESJ Length = 180 Score = 41.7 bits (96), Expect = 0.014, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 89 AAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISF 148 + Y G ++I+FS++ A+ Y V+ W G+ G V ++ Sbjct: 72 KSSYLKTGWGIVVGIASYIVFSVLAAMLYKVMLGRLR--GPWPGVFYGLAWWAVVFLLLG 129 Query: 149 PLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 P++G++ + W SE+ L+W I Sbjct: 130 PVLGMSRQITVAGWNTLFSELCIFLLWGLFI 160 >UniRef50_C6J3S2 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3S2_9BACL Length = 186 Score = 41.3 bits (95), Expect = 0.017, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%) Query: 82 LGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK-LWQGLLAGALAQ 140 L N+ +++ AG+ W+ I SI+ + Y + F K+K G+L G + Sbjct: 61 LEPFFKNSFLHSQAGYYLGWLSF--IGLSILATLIYVLA---FRKLKGPSPGILYGIVWW 115 Query: 141 LFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 + + PL+ L PPL +L +SE +L+W I Sbjct: 116 GILFGVLGPLLDLIPPLRELSRTTIISEFCLYLLWGLFI 154 >UniRef50_B4R8Y4 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R8Y4_PHEZH Length = 163 Score = 41.3 bits (95), Expect = 0.018, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 12/131 (9%) Query: 37 VPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAG 96 PLP RS A + + +A R L W+G + Sbjct: 11 APLPGRSIAAAALAGGLVDLVYASAVGALDGRGVLKVWQGVASGWMGRAAGDH-----GW 65 Query: 97 HVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQGLLAGALAQLFVHMISFPLMGL 153 TH + A Y V A P ++ L G + G ++ + PL Sbjct: 66 ASAALGIATHFGIATAMAGTYAVAAARLPILRRRPLACGAVYGLGLYGVMYGLVLPL--- 122 Query: 154 TPPLFDLPWYE 164 P +E Sbjct: 123 -RWPGAFPKWE 132 >UniRef50_D2BFQ4 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFQ4_STRRD Length = 149 Score = 40.6 bits (93), Expect = 0.032, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 1/80 (1%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 VTH F Y +A + + G G L + P +G+ PP+ Sbjct: 60 GAVTHFGFGAACGALYA-LARGRRRTPILLGAGYGLAIWLVSYQGWVPRLGILPPISGDR 118 Query: 162 WYENVSEIFGHLVWFWSIEI 181 GH+V+ + + Sbjct: 119 PGRPAVMAAGHVVYGTVLAL 138 >UniRef50_B9XGQ4 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XGQ4_9BACT Length = 163 Score = 40.6 bits (93), Expect = 0.038, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 106 HIIFSIVFAVGYCVVAEVFP--KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWY 163 H+ F +V + ++ K+++ G+ G L + P + PP Sbjct: 72 HLGFGMVAGGAFALIQPRSSSKKLQILHGIGYGLLVWAASYKGWIPAFNILPPPERDRPG 131 Query: 164 ENVSEIFGHLVW 175 S I H+V+ Sbjct: 132 RVKSMIAAHMVY 143 >UniRef50_D1C789 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C789_SPHTD Length = 156 Score = 40.2 bits (92), Expect = 0.046, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%) Query: 73 PPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQG 132 PP + + + + + +W + H+ + + + + P + G Sbjct: 34 PPPKHITERVEEEAGVRHKLSEPAFLSSW-LLAHVGYGAGAGALFGLGRRLLPSSDITAG 92 Query: 133 LLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 LL G L ++ P + L P + I H V+ ++ +I R L Sbjct: 93 LLYGGLVWSVSYLGLMPGLKLYPWPDEDQPSRQGVMIAAHAVYGVALALIDRRL 146 >UniRef50_C1D019 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D019_DEIDV Length = 150 Score = 40.2 bits (92), Expect = 0.046, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 1/70 (1%) Query: 106 HIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYEN 165 H + Y + + P L +G+ G ++ P GL P N Sbjct: 67 HFAYGAAVGALYAPLKD-LPGPPLLKGVGLGIFVWTGSYLGLLPATGLLSSATHHPARRN 125 Query: 166 VSEIFGHLVW 175 + I H +W Sbjct: 126 MLMIVAHFIW 135 >UniRef50_UPI000178961E hypothetical protein GYMC10_2085 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178961E Length = 165 Score = 39.8 bits (91), Expect = 0.064, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 107 IIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENV 166 I FS++ ++ Y + W G+ G + + + P + LT P+ L W N+ Sbjct: 74 IAFSVIASLIYVALFRKLK--GPWPGIAYGIVWWAVLFVALNPWLRLTDPVKKLSWDTNI 131 Query: 167 SEIFGHLVWFWSI 179 SE+ ++W I Sbjct: 132 SEVCIFILWGLFI 144 >UniRef50_A5V1T3 Putative uncharacterized protein n=4 Tax=Roseiflexus RepID=A5V1T3_ROSS1 Length = 192 Score = 39.4 bits (90), Expect = 0.066, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGL------LAGALAQLFVHMISFPLMG 152 + H+ S++F VG+ ++ K+ L G + G L + I PL+ Sbjct: 84 GSMIHLALSVLFGVGFGILTTRIWKMPLAYGAPMVFGFVYGLAIWLIAYFIVLPLLN 140 >UniRef50_B6IU58 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IU58_RHOCS Length = 185 Score = 39.0 bits (89), Expect = 0.094, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 1/81 (1%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 H + Y + G G ++ P +GL PP Sbjct: 78 TLGAHFGYGAATGAAYPLWRRAVGP-GPGSGAAFGLAVWAGSYLGWIPALGLLPPATRHS 136 Query: 162 WYENVSEIFGHLVWFWSIEII 182 + H+VW + ++ Sbjct: 137 GRRVALMLAAHVVWGAATALV 157 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacte... 257 2e-67 UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria Re... 226 4e-58 UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinom... 225 8e-58 UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citro... 223 3e-57 UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serrati... 220 3e-56 UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylo... 197 3e-49 UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_... 187 2e-46 UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacte... 183 4e-45 UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus ... 167 1e-40 UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=... 166 3e-40 UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus... 165 7e-40 UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei A... 164 1e-39 UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces ur... 164 2e-39 UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=... 160 2e-38 UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=L... 160 4e-38 UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudom... 159 5e-38 UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus... 142 6e-33 UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=L... 134 2e-30 UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATC... 133 4e-30 UniRef50_A0M772 Putative uncharacterized protein n=3 Tax=Flavoba... 133 4e-30 UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avi... 126 4e-28 UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacte... 124 2e-27 UniRef50_C6E5D4 Putative uncharacterized protein n=4 Tax=Geobact... 121 2e-26 UniRef50_Q027J2 Putative uncharacterized protein n=1 Tax=Candida... 111 1e-23 UniRef50_C1CZF3 Putative uncharacterized protein n=1 Tax=Deinoco... 105 7e-22 Sequences not found previously or not previously below threshold: UniRef50_B1ZBF8 Putative uncharacterized protein n=2 Tax=Methylo... 52 9e-06 UniRef50_D1C789 Putative uncharacterized protein n=1 Tax=Sphaero... 50 4e-05 UniRef50_B6IU58 Putative uncharacterized protein n=1 Tax=Rhodosp... 49 1e-04 UniRef50_Q11CJ5 Putative uncharacterized protein n=1 Tax=Chelati... 49 1e-04 UniRef50_C6CU03 Putative uncharacterized protein n=1 Tax=Paeniba... 48 1e-04 UniRef50_A5FBU6 Putative uncharacterized protein n=1 Tax=Flavoba... 47 3e-04 UniRef50_UPI000178961E hypothetical protein GYMC10_2085 n=1 Tax=... 47 3e-04 UniRef50_C6J3S2 Putative uncharacterized protein n=1 Tax=Paeniba... 47 5e-04 UniRef50_B9XGQ4 Putative uncharacterized protein n=1 Tax=bacteri... 45 0.001 UniRef50_C1D019 Putative uncharacterized protein n=1 Tax=Deinoco... 44 0.002 UniRef50_UPI0001B51631 hypothetical protein SvirD4_39129 n=1 Tax... 44 0.003 UniRef50_D2BFQ4 Putative uncharacterized protein n=1 Tax=Strepto... 44 0.003 UniRef50_B4R8Y4 Putative uncharacterized protein n=1 Tax=Phenylo... 43 0.005 UniRef50_A5V1T3 Putative uncharacterized protein n=4 Tax=Roseifl... 43 0.008 UniRef50_B1ZM97 Putative uncharacterized protein n=1 Tax=Opitutu... 43 0.008 UniRef50_Q2S6D9 Membrane bound his kinase A n=2 Tax=Bacteria Rep... 43 0.009 UniRef50_UPI00016939DD hypothetical protein Plarl_24113 n=1 Tax=... 41 0.016 UniRef50_A3X4F2 Putative membrane protein n=1 Tax=Roseobacter sp... 41 0.023 UniRef50_C1YFN2 Putative uncharacterized protein n=1 Tax=Nocardi... 41 0.025 >UniRef50_P0AAA2 Inner membrane protein yagU n=68 Tax=Proteobacteria RepID=YAGU_ECO57 Length = 204 Score = 257 bits (655), Expect = 2e-67, Method: Composition-based stats. Identities = 204/204 (100%), Positives = 204/204 (100%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA Sbjct: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV Sbjct: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV 120 Query: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE Sbjct: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 Query: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 IIRRDLRNRITHEPDPEIPLGSNR Sbjct: 181 IIRRDLRNRITHEPDPEIPLGSNR 204 >UniRef50_B4TT31 Inner membrane protein YagU n=11 Tax=Bacteria RepID=B4TT31_SALSV Length = 185 Score = 226 bits (575), Expect = 4e-58, Method: Composition-based stats. Identities = 117/202 (57%), Positives = 141/202 (69%), Gaps = 21/202 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 +F +T P RRRYG+AA IG AG++SAFVKWGAEVPLPPR+ Sbjct: 5 GLFVKTDPQRRRYGVAALIGFAAGIISAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPYIFLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 47 --FSGGRDEFNPPYIFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + LTPPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGILAGLIVTVVVHGIFCPALNLTPPLTQLPFDEYASEILGHVFWFWVIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGSN 203 +RRDLRNRITHEPD E+PL + Sbjct: 164 MRRDLRNRITHEPDAEVPLTTR 185 >UniRef50_A7BBB3 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBB3_9ACTO Length = 184 Score = 225 bits (572), Expect = 8e-58, Method: Composition-based stats. Identities = 90/201 (44%), Positives = 114/201 (56%), Gaps = 24/201 (11%) Query: 5 EQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQI 64 QT P RRRYG+AA G++ G+VSA VK+G EVPLPPR+P Sbjct: 4 IQTNPKRRRYGVAALAGVLGGIVSAIVKFGWEVPLPPRTP-------------------- 43 Query: 65 DCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGH-VFNWVG-VTHIIFSIVFAVGYCVVAE 122 RN NPP L+ YT+ G+ WV + H FSI FAV YCV+AE Sbjct: 44 --ERNATNPPQELLQQLGLPESVTHLSYTYNGNEGLPWVSFIVHFAFSIGFAVLYCVLAE 101 Query: 123 VFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 FP+IKLWQG G + H++ PLMG P ++ P+ E+ SE GH++W W+IE+ Sbjct: 102 RFPQIKLWQGAAFGIFVYVAFHVVLMPLMGTVPAPWNQPFAEHFSEFLGHIIWLWAIEVF 161 Query: 183 RRDLRNRITHEPDPEIPLGSN 203 RRD+RNRITHEPD E PL S Sbjct: 162 RRDMRNRITHEPDAEFPLESR 182 >UniRef50_UPI00019F16E6 inner membrane protein YagU n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F16E6 Length = 186 Score = 223 bits (567), Expect = 3e-57, Method: Composition-based stats. Identities = 116/203 (57%), Positives = 142/203 (69%), Gaps = 21/203 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 ++F +TP RRRYG+A +G+++GV+SAFVKWGAEVPLPPR+ Sbjct: 5 DLFTRTPTERRRYGIAVLVGIVSGVLSAFVKWGAEVPLPPRT------------------ 46 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R+ NPPY+FLRD+LG+ DP VYTF+ HV N V VTHIIFS+VFAVGYCV A Sbjct: 47 --FSLGRDEFNPPYLFLRDYLGI-DPTQTVYTFSEHVINPVMVTHIIFSLVFAVGYCVAA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 E+FPK+KLWQG+LAG + + VH I P + L+PPL LP+ E SEI GH+ WFW IE+ Sbjct: 104 EIFPKVKLWQGVLAGLIVTVAVHGIFIPALHLSPPLSQLPFDEYASEIIGHIFWFWVIEM 163 Query: 182 IRRDLRNRITHEPDPEIPLGSNR 204 IRRDLRNRITHEPD EIPL R Sbjct: 164 IRRDLRNRITHEPDAEIPLSLVR 186 >UniRef50_D1RTE9 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RTE9_SEROD Length = 187 Score = 220 bits (559), Expect = 3e-56, Method: Composition-based stats. Identities = 126/201 (62%), Positives = 150/201 (74%), Gaps = 21/201 (10%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 + F QTP RRRYG+A F+G+IAG++SAFVKWGAEVPLPPR+ +D Sbjct: 5 DFFVQTPLERRRYGVALFVGVIAGLLSAFVKWGAEVPLPPRTILD--------------- 49 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVA 121 R NPPY+FLRD+LG+ DP A VYTF+ HV N V VTHIIFS+VFA+GYCVVA Sbjct: 50 -----GRAEFNPPYLFLRDYLGI-DPTATVYTFSEHVINPVMVTHIIFSLVFAIGYCVVA 103 Query: 122 EVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 EVFPK+KLWQG+LAG +A + VH ISFPL+GLTPPL LP E VSEI GH WFW+IE+ Sbjct: 104 EVFPKVKLWQGVLAGLIATVCVHGISFPLLGLTPPLSMLPVEEYVSEILGHAFWFWAIEL 163 Query: 182 IRRDLRNRITHEPDPEIPLGS 202 +RRDLRNRITH+PD E+PL S Sbjct: 164 VRRDLRNRITHQPDAEVPLSS 184 >UniRef50_A7GXI8 S-adenosylmethionine synthetase n=13 Tax=Campylobacter RepID=A7GXI8_CAMC5 Length = 184 Score = 197 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 86/192 (44%), Positives = 114/192 (59%), Gaps = 19/192 (9%) Query: 7 TPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDC 66 T P +RRYGL IG++AGV A VKWG EVP PPR+P F Sbjct: 4 TDPAKRRYGLMFLIGILAGVFGAIVKWGWEVPFPPRNPNVFF---------------PVD 48 Query: 67 SRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNW-VGVTHIIFSIVFAVGYCVVAEVFP 125 + + PP IFL TD Y F+G + + H++FS+VF V YCV+AE +P Sbjct: 49 AMERVTPPKIFLEQIGAATD---WTYVFSGVTQPLSIFIVHVLFSVVFGVMYCVIAEAWP 105 Query: 126 KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRD 185 +IK+WQG + G + H+I+ PLM PPL ++P+ EN SE FGH+VW W +EI+RRD Sbjct: 106 RIKMWQGAVFGIAVYVLAHVIAMPLMKEVPPLSEIPFDENCSEFFGHIVWLWGMEIVRRD 165 Query: 186 LRNRITHEPDPE 197 +RNR+T EPDPE Sbjct: 166 IRNRVTKEPDPE 177 >UniRef50_Q6A9Y0 Conserved protein n=5 Tax=Bacteria RepID=Q6A9Y0_PROAC Length = 255 Score = 187 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 78/199 (39%), Positives = 106/199 (53%), Gaps = 23/199 (11%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 M++ T RR +AA +G++AG+ SA VK+G EVP PPR+P Sbjct: 71 MSVPSTTDRARRHPEVAALVGVVAGIFSAIVKFGWEVPFPPRTP---------------- 114 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCV 119 RN NPP L + F G+ + + H F+I F V YCV Sbjct: 115 ------ERNATNPPQQLLEQLGFSDHFAHTLVYFNGNGLPVMSFIIHFGFAIFFGVAYCV 168 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 AE FPKI LWQG+ G + + H+I P +G P + PW E++SE+ GH+VW WSI Sbjct: 169 GAERFPKITLWQGVAFGVVVYVVFHVIVMPGLGTVPAPWHQPWQEHLSELLGHIVWMWSI 228 Query: 180 EIIRRDLRNRITHEPDPEI 198 E++RRDLR+RIT EPDP + Sbjct: 229 EVVRRDLRSRITGEPDPWV 247 >UniRef50_C2LPJ5 Periplasmic/secreted protein n=6 Tax=Enterobacteriaceae RepID=C2LPJ5_PROMI Length = 173 Score = 183 bits (463), Expect = 4e-45, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 27/198 (13%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA 60 +++F+ T + R G+A ++G+IAG+ SA VK G E +PPR+ Sbjct: 2 IDLFKLTKKSSRHIGIAIYVGIIAGIFSALVKSGFEDLIPPRTL---------------- 45 Query: 61 AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCV 119 PP + L + LGL + + Y + G+ NW G HI+FSIV AV YCV Sbjct: 46 ---------ETTPPPVVLLEKLGL-NIDTMTYHWMGYSINWGGNGVHILFSIVIAVTYCV 95 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 +AE PK+KL G+ G +F H + PL+GL+ L+ + +SE G W WSI Sbjct: 96 IAEFLPKVKLLHGICFGIGVSVFAHGLVVPLLGLSGWLWTAGYQALISEFVGTAFWIWSI 155 Query: 180 EIIRRDLRNRITHEPDPE 197 E IR++LR +T E D E Sbjct: 156 EAIRQNLRYCLTKENDAE 173 >UniRef50_C0WRT7 Possible secreted protein n=2 Tax=Lactobacillus RepID=C0WRT7_LACBU Length = 187 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 23/173 (13%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 A G++AG +S VK G E LPPR+P R+ NPP Sbjct: 31 AVKAGMVAGFLSGLVKLGWEDVLPPRTP----------------------QRDATNPPQA 68 Query: 77 FLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L + T + YT++ WV + H FS FAVGY V+ V P ++L G LA Sbjct: 69 MLEKFGVPTSITHSTYTYSEQKMPWVSFIIHFGFSTTFAVGYSVMQHVIPPVRLGHGALA 128 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 G H+ P MGLTP DLP E VSE GH+ W +I+++ L Sbjct: 129 GLGPWGAFHLGVLPKMGLTPDAKDLPIEEQVSEALGHIAWMSTIDLVSNALYQ 181 >UniRef50_Q040L1 Predicted periplasmic/secreted protein n=80 Tax=Bacilli RepID=Q040L1_LACGA Length = 170 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 74/178 (41%), Gaps = 28/178 (15%) Query: 18 AFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIF 77 G AGV+S VK G E LPPR+P RN NPP Sbjct: 11 LIAGTAAGVISGLVKLGWENILPPRTP----------------------ERNKTNPPQKL 48 Query: 78 LRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPK-IKLWQGLLA 135 L A YT++G WV + H FSI FA Y + E K + + QG+ Sbjct: 49 LEQMGVPAKLTHATYTYSGEKLPWVSYLVHFGFSISFATAYAALLEKKIKWLTVDQGVPF 108 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWS----IEIIRRDLRNR 189 G + H++ PLM P D P E++SE GH+ W W+ EI+ + L R Sbjct: 109 GLAVWIAFHLVIMPLMKTVPSPKDQPLEEHISEALGHIAWMWTNNEIAEIVLKQLGQR 166 >UniRef50_C5QVK9 Integral membrane protein n=5 Tax=Staphylococcus epidermidis RepID=C5QVK9_STAEP Length = 167 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 90/181 (49%), Gaps = 24/181 (13%) Query: 9 PNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSR 68 N+ R+ L G+IAG++S VK G EV PPR+P SR Sbjct: 5 KNQSRFKL-LIAGIIAGLLSGVVKLGWEVMFPPRTP----------------------SR 41 Query: 69 NFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKI 127 N NPP L+ +D Y F+ H W+ + H FSIV A+ Y +A+ + KI Sbjct: 42 NATNPPQQLLQLLGIPSDITHLTYNFSEHALPWISFIVHYSFSIVIAIIYIYIAKKYTKI 101 Query: 128 KLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLR 187 L G L G + + H+I P+M + P FD P+ E++SE FGH+VW IE++RR Sbjct: 102 TLGYGALFGIVIWIVFHLILMPIMHVVPNAFDQPFSEHLSEFFGHIVWMMVIEMVRRYFY 161 Query: 188 N 188 N Sbjct: 162 N 162 >UniRef50_C4UW73 Phage membrane protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UW73_YERRO Length = 175 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 101/198 (51%), Gaps = 27/198 (13%) Query: 2 NIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAA 61 N+FE T N R LA +IG+IAG+ SA VK G E LPPR+ Sbjct: 3 NVFELTKKNTRHVSLAIYIGVIAGIFSALVKSGFETILPPRT------------------ 44 Query: 62 GQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVV 120 PP + L + LG+ + + Y + + NW G HIIFSIV A+ YCV+ Sbjct: 45 -------AETMPPPVVLLEKLGV-NIDPMTYHWMDYSLNWGGNGVHIIFSIVIAIIYCVI 96 Query: 121 AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE 180 AE PK+K+ G++ G +F H + PL+GL+ L+ +SE G W WSIE Sbjct: 97 AEYLPKVKMLHGIIFGIGVSVFAHGLVVPLLGLSGWLWVAGPEALISEFVGTAFWIWSIE 156 Query: 181 IIRRDLRNRITHEPDPEI 198 IR++LR +T PD E+ Sbjct: 157 AIRQNLRYTLTKGPDAEL 174 >UniRef50_C0W8V5 Integral membrane protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W8V5_9ACTO Length = 175 Score = 164 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 57/171 (33%), Positives = 75/171 (43%), Gaps = 23/171 (13%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 AA + ++AG+VS VK G E LPPR+P R+ NPP Sbjct: 22 AAGVSMLAGLVSGMVKIGWEAALPPRTP----------------------ERDDPNPPMH 59 Query: 77 FLRDWLGLTDPNAAVYTFAGHVFNWVGV-THIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L + A TF + G+ H FS+ AV YCV A P I G + Sbjct: 60 LLEQLGIPAEVREATVTFNENQVPVTGLAVHHAFSVAMAVPYCVAARRCPAITAGGGAVY 119 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 G H+ P +G P + PW E++SE GH+VW WSIE +RR L Sbjct: 120 GLGVWAGFHLGLLPALGTVPAATEQPWQEHMSEAAGHVVWAWSIEAVRRAL 170 >UniRef50_Q03ZW5 Predicted periplasmic/secreted protein n=11 Tax=Lactobacillales RepID=Q03ZW5_LEUMM Length = 179 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 24/168 (14%) Query: 17 AAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYI 76 + F G IAG++S VK G E LPPR+ +RN NPP Sbjct: 18 SIFYGFIAGMISGMVKIGWENILPPRT----------------------LARNATNPPQH 55 Query: 77 FLRDWLGLTDPNAAVYTFAG--HVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLL 134 + + + ++ VF + + H F+I FA+ Y V++ + K+ LWQG Sbjct: 56 MAEQLGIPSKLVHSFFYYSQDQKVFWFTLILHFSFAIAFAILYVFVSQYWSKVALWQGAA 115 Query: 135 AGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 G + H+I P G P ++ P E++SE FGH+VW WSI + Sbjct: 116 YGIFLWILWHIIIMPAFGTIPAPWNQPLDEHISEFFGHIVWAWSIAVT 163 >UniRef50_Q03TL9 Predicted periplasmic/secreted protein n=6 Tax=Lactobacillus RepID=Q03TL9_LACBA Length = 173 Score = 160 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 23/165 (13%) Query: 30 FVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNA 89 FVK G E LPPR+ R+ +NPP ++ Sbjct: 27 FVKLGWENVLPPRTAK----------------------RDAVNPPETLMKQVGIPDSILN 64 Query: 90 AVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISF 148 A Y ++GH W G V H FS FAV Y ++ E P IK G G + H+ Sbjct: 65 ASYHYSGHEIPWAGFVIHFGFSTTFAVLYQILGEKVPAIKKDAGTWFGLAIWVAFHLGIM 124 Query: 149 PLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHE 193 P MG P + P E++SE GH+VW + +++ D+ R+T + Sbjct: 125 PAMGTVPTAKEQPKDEHISEALGHIVWMVTNDLVGTDVYRRLTQQ 169 >UniRef50_Q4ZYE8 Putative uncharacterized protein n=4 Tax=Pseudomonas syringae group RepID=Q4ZYE8_PSEU2 Length = 164 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 68/181 (37%), Positives = 92/181 (50%), Gaps = 27/181 (14%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N R YG+AA G + G VS+F+KWG E+P PPR+P + Sbjct: 2 NTRAYGVAALAGFVGGNVSSFIKWGTEIPFPPRTP------------------------D 37 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIK 128 PP L + Y ++ HV N+ + H FSI FA+ YC++ +P+ Sbjct: 38 RPVPPVEMLDSLGI--NAQQLTYVYSEHVVNYGSALVHHGFSIFFAMFYCLLVLRYPRAA 95 Query: 129 LWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 LWQGL G L L H + P PPL++LP E +SE FGHL+W W IE+IRRDL+ Sbjct: 96 LWQGLGFGLLVTLGFHGVIMPAFHWAPPLWELPASELLSETFGHLLWMWVIEVIRRDLQQ 155 Query: 189 R 189 R Sbjct: 156 R 156 >UniRef50_B9CPR6 Integral membrane protein n=6 Tax=Staphylococcus RepID=B9CPR6_STACP Length = 158 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 23/174 (13%) Query: 15 GLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPP 74 GL+ G + +K G E +PPR+P Sbjct: 7 KRIMVTGLVGGFIGGAIKMGWEALVPPRTPEREEEPPP---------------------- 44 Query: 75 YIFLRDWLGLTDPNAAVYTFAGHVFN-WVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGL 133 L A Y + + V H FSI A Y ++AE + K+ + +G Sbjct: 45 MTLLNQLGLPEKIKHATYNYNQNEIPIAVMGIHYGFSIAHAFAYAILAERYSKVTVLRGS 104 Query: 134 LAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLR 187 L G + H P +GLTP + +LP E +SE+ GH+VW +I+ +R L+ Sbjct: 105 LFGIAINIAFHEYLLPRVGLTPEIDELPKEERISELLGHIVWMNAIDYVRSALK 158 >UniRef50_Q03VE2 Predicted periplasmic/secreted protein n=5 Tax=Lactobacillales RepID=Q03VE2_LEUMM Length = 167 Score = 134 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 24/167 (14%) Query: 18 AFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIF 77 IG IAGV+S VK G E LPPR+ R+ NPP Sbjct: 9 VVIGTIAGVISGMVKIGWEAILPPRTQ----------------------ERDETNPPQRL 46 Query: 78 LRDWLGLTDPNAAVYTF-AGHVFNWVGVT-HIIFSIVFAVGYCVVAEVFPKIKLWQGLLA 135 L+ A + + ++V + H FSI F V ++ + FP + QG + Sbjct: 47 LQQMGIPRKWTHAYFYYATDQKVHYVALIMHFSFSIAFGVLLVLLDQYFPIVTFGQGSVY 106 Query: 136 GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 G + + H+I P P P+ E+ SE GH+VW WS+ +I Sbjct: 107 GVVIWIIFHIIILPATKTIPSALKQPFSEHFSEFLGHIVWGWSMYLI 153 >UniRef50_C3XF75 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XF75_9HELI Length = 173 Score = 133 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 23/184 (12%) Query: 13 RYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLN 72 R ++ FIG+I G + + V+ G EV P + + + A L+ N L+ Sbjct: 12 RVWISLFIGVIVGSIGSVVRIGWEVLFPLSLQMPLDSNAEYILQLLCI------DLNLLS 65 Query: 73 PPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQG 132 Y+F + + VY V +FSI F++ Y + AE + K+K G Sbjct: 66 LKYVFSDGY-----EWSVVYL----------VWQFLFSIFFSLFYILFAEFWQKLKFAHG 110 Query: 133 LLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITH 192 + G + L V+++ PL G + V L+W W IE+ RRDLRNRITH Sbjct: 111 IFYGIMLWLCVYVLFLPLCGFVRVDSMFSY--YVCSFIESLLWIWIIELTRRDLRNRITH 168 Query: 193 EPDP 196 E DP Sbjct: 169 ERDP 172 >UniRef50_A0M772 Putative uncharacterized protein n=3 Tax=Flavobacteriaceae RepID=A0M772_GRAFK Length = 169 Score = 133 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 29/191 (15%) Query: 1 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESL-IR 59 ++ F Q G + G+ VK E LP R + L ++ Sbjct: 3 VSTFLQKDSYMSNTSRGLISGFVGGLAGTAVKTLIEQFLPVRKIEQSSAQIKIIDDLSVK 62 Query: 60 AAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCV 119 G N + G S+ A GY Sbjct: 63 ITGTPVSIENEALAEQLVNIPMGG--------------------------SLGAAYGYGK 96 Query: 120 VAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 ++ G+ GA H S P++GL P D+P ++E+F H+ + Sbjct: 97 KERY--GLRPMDGIAFGATTWASTHETSLPILGLEPKPTDVPIRMQMNELFAHVAFGVVT 154 Query: 180 EIIRRDLRNRI 190 E++R + +I Sbjct: 155 EVVRHYVDKQI 165 >UniRef50_Q2KVD1 Putative membrane protein n=2 Tax=Bordetella avium 197N RepID=Q2KVD1_BORA1 Length = 167 Score = 126 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 28/182 (15%) Query: 11 RRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNF 70 + + G+ AG +SA VK G E LPPR P + Sbjct: 12 KHSLSVLIGFGIWAGFLSALVKSGVETLLPPRPPGAVPPPIGLLN--------------- 56 Query: 71 LNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVG-VTHIIFSIVFAVGYCVVAEVFPKIKL 129 L D + Y F NW G HI+FS+V A Y + EV K+ + Sbjct: 57 -----------LMGFDAGSMNYAFNQAAVNWGGNGVHILFSMVMAFVYVRLMEVCSKVGI 105 Query: 130 WQGLLA-GALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRN 188 W GL A + H I FPL+G+ P + + +SE FG +W W+IE +RR L Sbjct: 106 WWGLPFAWLTATIGAHGIVFPLLGIGPLPWHIGVDAYISEFFGTALWIWTIECMRRVLLR 165 Query: 189 RI 190 ++ Sbjct: 166 KV 167 >UniRef50_D2T631 Inner membrane protein yagU n=24 Tax=Proteobacteria RepID=D2T631_ERWPY Length = 188 Score = 124 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 36/184 (19%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 N+ + + LI G +S+ VK G E +PPR Sbjct: 7 NKINLKIIVWSTLIGGFISSLVKSGTEANMPPRIA------------------------G 42 Query: 70 FLNPPYIFLRDWLGLTDPNAAV--YTFAGHVFN-WVGVTHIIFSIVFAVGYCVVAEVFPK 126 ++PP + WLG NA Y + G V + H +FS FA Y +++ +PK Sbjct: 43 EISPPAAHIDAWLGPLGINAHSMDYVYQGITIPGAVMLYHWLFSFAFAFAYVLLSAFWPK 102 Query: 127 IKLWQGLLAGALAQLFVHMISFPLMGL---------TPPLFDLPWYENVSEIFGHLVWFW 177 ++LW G G + + +H P +G L+DL YE SEI GH+ W Sbjct: 103 VRLWYGAAYGLIITIAMHGFLIPALGFRHPAYSGGKIGWLWDLNGYELWSEITGHIAWSV 162 Query: 178 SIEI 181 SIE+ Sbjct: 163 SIEV 166 >UniRef50_C6E5D4 Putative uncharacterized protein n=4 Tax=Geobacter RepID=C6E5D4_GEOSM Length = 171 Score = 121 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 54/176 (30%), Gaps = 22/176 (12%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 RR G+ AG+V+ V +E L D + + Sbjct: 11 ERRHP---ILTGMAAGLVAGTVAGASERLL------DRLVSKKQKRRDRKVREGSAHQVA 61 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFA-GHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK 128 L L + A F + W G+ H + + FP + Sbjct: 62 GPRFASKLLGRRLDPQEKRRANLAFGVAYGLGW-GLIHSG-----------LRKRFPLLG 109 Query: 129 LWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRR 184 W GL + P + L+P L +PW + E+ H+ W + E + R Sbjct: 110 RWGGLPFAIPFFFACDGVIAPALRLSPRLDRVPWQPSAKEMGNHIAWSAAAEWVHR 165 >UniRef50_Q027J2 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027J2_SOLUE Length = 168 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 24/177 (13%) Query: 11 RRRYGLAAFIGLIAGVVSAF---VKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCS 67 +R+ + ++G+ AG++ + G A +S + G Sbjct: 4 QRKRRINPWVGMAAGLIGGLAGSIAIG----------KFNHAWAKATKSKLEEEGTDSTV 53 Query: 68 RNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKI 127 + L L + A H F Y A + P++ Sbjct: 54 KAASAVSEGVLNHQLTPDEKPTA-----------AAAVHYGFGSTMGALYGAGAALKPEV 102 Query: 128 KLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRR 184 GL GA L H + P +G + P+ + + + E+ GH+V+ ++ RR Sbjct: 103 GGAAGLPFGAGVYLAAHAAAVPALGWSRPITQNRFSDEIGELLGHVVYGLVTDLTRR 159 >UniRef50_C1CZF3 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZF3_DEIDV Length = 180 Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%) Query: 100 NWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFD 159 W H ++ Y V+ ++ QG + GA + I + L+ P Sbjct: 78 PWGVAAHFALGVLPGALYGVLRHRVKELPKAQGFVYGAGLFVLNDEIVNAALKLSGPPQA 137 Query: 160 LPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGS 202 PW +V + H+V + + R + + P ++ + Sbjct: 138 YPWQAHVRGLVSHIVLGMVTDAVLRVMDRELHPVPVEQVSRST 180 >UniRef50_B1ZBF8 Putative uncharacterized protein n=2 Tax=Methylobacterium RepID=B1ZBF8_METPB Length = 190 Score = 52.2 bits (123), Expect = 9e-06, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 13/185 (7%) Query: 10 NRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRN 69 + G A + + G+++ +V + P+ + S Sbjct: 4 KKSVPGHAVWADIAVGLLAGWVATQVTNL--AQRPLRRATPEHIDRHEEKVRPGASSSLV 61 Query: 70 FLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKL 129 L V G W H+ + + Y ++ + Sbjct: 62 AARKLAEILD-----------VAPSQGRDARWGKAIHLAVGMGWGPVYGLLRRYGGLRPV 110 Query: 130 WQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNR 189 L +G+ L + P +GL+ P P + V HLV+ ++ + L Sbjct: 111 GAALASGSAMSLILDEALVPALGLSAPCHHYPTFTRVRGFIAHLVYGAAVAMAAEGLGRA 170 Query: 190 ITHEP 194 + P Sbjct: 171 LGRPP 175 >UniRef50_D1C789 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C789_SPHTD Length = 156 Score = 50.3 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 1/114 (0%) Query: 73 PPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQG 132 PP + + + + + +W + H+ + + + + P + G Sbjct: 34 PPPKHITERVEEEAGVRHKLSEPAFLSSW-LLAHVGYGAGAGALFGLGRRLLPSSDITAG 92 Query: 133 LLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDL 186 LL G L ++ P + L P + I H V+ ++ +I R L Sbjct: 93 LLYGGLVWSVSYLGLMPGLKLYPWPDEDQPSRQGVMIAAHAVYGVALALIDRRL 146 >UniRef50_B6IU58 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IU58_RHOCS Length = 185 Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 1/81 (1%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 H + Y + G G ++ P +GL PP Sbjct: 78 TLGAHFGYGAATGAAYPLWRRAVGP-GPGSGAAFGLAVWAGSYLGWIPALGLLPPATRHS 136 Query: 162 WYENVSEIFGHLVWFWSIEII 182 + H+VW + ++ Sbjct: 137 GRRVALMLAAHVVWGAATALV 157 >UniRef50_Q11CJ5 Putative uncharacterized protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CJ5_MESSB Length = 164 Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 + H F + Y + P G+L G + P +G+ P P Sbjct: 59 TLLAHFGFGALAGGIYACLTPRRP-----NGVLYGLAVWAGSYFGWIPALGMLKPATRHP 113 Query: 162 WYENVSEIFGHLVWFWSIEIIRRDL 186 N+ + H++W ++ +L Sbjct: 114 AARNLLMLAAHVIWGAALAAGLNEL 138 >UniRef50_C6CU03 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CU03_PAESJ Length = 180 Score = 48.3 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 2/98 (2%) Query: 82 LGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQL 141 L + Y G ++I+FS++ A+ Y V+ W G+ G Sbjct: 65 LLADPFFKSSYLKTGWGIVVGIASYIVFSVLAAMLYKVMLGRLR--GPWPGVFYGLAWWA 122 Query: 142 FVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 V ++ P++G++ + W SE+ L+W I Sbjct: 123 VVFLLLGPVLGMSRQITVAGWNTLFSELCIFLLWGLFI 160 >UniRef50_A5FBU6 Putative uncharacterized protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBU6_FLAJ1 Length = 154 Score = 47.2 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Query: 88 NAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQGLLAGALAQLFVH 144 YT + + + H ++VFA Y + FP ++ L GL+ G + ++ Sbjct: 49 KQEAYTNGSQMAFYGLLLHYFIALVFAYLYFKIYPYFPILRKSFLLSGLIYGLFVWIVMN 108 Query: 145 MISFPLM--GLTPPLFDLP 161 +I P++ L P FD P Sbjct: 109 LIVLPIVFPKLPPKQFDFP 127 >UniRef50_UPI000178961E hypothetical protein GYMC10_2085 n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178961E Length = 165 Score = 47.2 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 4/109 (3%) Query: 71 LNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLW 130 L + L + + T AG + W+ FS++ ++ Y + W Sbjct: 40 LRFTKVVPGFLLEPFFKHEFLKTTAGQIAGWLSFI--AFSVIASLIYVALFRKLK--GPW 95 Query: 131 QGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 G+ G + + + P + LT P+ L W N+SE+ ++W I Sbjct: 96 PGIAYGIVWWAVLFVALNPWLRLTDPVKKLSWDTNISEVCIFILWGLFI 144 >UniRef50_C6J3S2 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3S2_9BACL Length = 186 Score = 46.8 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 72 NPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQ 131 + + L N+ +++ AG+ W+ SI+ + Y + Sbjct: 51 SFTSVLPGYLLEPFFKNSFLHSQAGYYLGWLSFI--GLSILATLIYVLAFRKLK--GPSP 106 Query: 132 GLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 G+L G + + + PL+ L PPL +L +SE +L+W I Sbjct: 107 GILYGIVWWGILFGVLGPLLDLIPPLRELSRTTIISEFCLYLLWGLFI 154 >UniRef50_B9XGQ4 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XGQ4_9BACT Length = 163 Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 2/80 (2%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFP--KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFD 159 H+ F +V + ++ K+++ G+ G L + P + PP Sbjct: 68 AVAAHLGFGMVAGGAFALIQPRSSSKKLQILHGIGYGLLVWAASYKGWIPAFNILPPPER 127 Query: 160 LPWYENVSEIFGHLVWFWSI 179 S I H+V+ + Sbjct: 128 DRPGRVKSMIAAHMVYGAVL 147 >UniRef50_C1D019 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D019_DEIDV Length = 150 Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 V H + Y + + P L +G+ G ++ P GL P Sbjct: 63 TVVNHFAYGAAVGALYAPLKD-LPGPPLLKGVGLGIFVWTGSYLGLLPATGLLSSATHHP 121 Query: 162 WYENVSEIFGHLVWFWSI 179 N+ I H +W Sbjct: 122 ARRNMLMIVAHFIWGGVT 139 >UniRef50_UPI0001B51631 hypothetical protein SvirD4_39129 n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B51631 Length = 182 Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 20/177 (11%) Query: 12 RRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFL 71 RR L + AG+++ V + A RA G Sbjct: 4 RRNPLTPLAAVTAGLLAGAV-------------GTVCLDAVHYWKYRRAGGTDSPLAWEF 50 Query: 72 NPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVT------HIIFSIVFAVGYCVVAEVFP 125 P + + + F H + V + Y +VA P Sbjct: 51 APVESWEKAPDPGQVAKRVIEGFTQRRLPDKTAWLTSTIAHWAYGSVAGMAYGIVAGSLP 110 Query: 126 KIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEII 182 + G+ GA ++ P+ GL P++ + H+ + + Sbjct: 111 RPSPVYGVPFGAAVFAG-DYVALPIAGLYKPIWQYDHKVVAWDFGAHVAYGTGTAVT 166 >UniRef50_D2BFQ4 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BFQ4_STRRD Length = 149 Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLP 161 VTH F Y + + + G G L + P +G+ PP+ Sbjct: 60 GAVTHFGFGAACGALYALARGR-RRTPILLGAGYGLAIWLVSYQGWVPRLGILPPISGDR 118 Query: 162 WYENVSEIFGHLVWFWSIEI 181 GH+V+ + + Sbjct: 119 PGRPAVMAAGHVVYGTVLAL 138 >UniRef50_B4R8Y4 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R8Y4_PHEZH Length = 163 Score = 43.3 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 15/151 (9%) Query: 37 VPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAG 96 PLP RS A + + +A R L W+G + Sbjct: 11 APLPGRSIAAAALAGGLVDLVYASAVGALDGRGVLKVWQGVASGWMGRAAGDH-----GW 65 Query: 97 HVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQGLLAGALAQLFVHMISFPLMGL 153 TH + A Y V A P ++ L G + G ++ + PL Sbjct: 66 ASAALGIATHFGIATAMAGTYAVAAARLPILRRRPLACGAVYGLGLYGVMYGLVLPL--- 122 Query: 154 TPPLFDLPWYE---NVSEIFGHLVWFWSIEI 181 P +E + +++ H+ +I Sbjct: 123 -RWPGAFPKWEGARSAADMAAHVGVGLAIAW 152 >UniRef50_A5V1T3 Putative uncharacterized protein n=4 Tax=Roseiflexus RepID=A5V1T3_ROSS1 Length = 192 Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 102 VGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLL------AGALAQLFVHMISFPLM 151 + H+ S++F VG+ ++ K+ L G G L + I PL+ Sbjct: 84 GSMIHLALSVLFGVGFGILTTRIWKMPLAYGAPMVFGFVYGLAIWLIAYFIVLPLL 139 >UniRef50_B1ZM97 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZM97_OPITP Length = 167 Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 89 AAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIK---LWQGLLAGALAQLFVHM 145 A Y+ A + H + + + A Y ++ ++ G L GA A + + M Sbjct: 66 RATYSGAAASASLGVALHFLIAFIIAAIYVALSRKAAALRERPFVFGALYGAGAYVVMQM 125 Query: 146 ISFPLMGLTPPLFDLPWYENVSEIFGHLV 174 I PL P + P + GH+V Sbjct: 126 IVLPLSAWHSPFW--PPNVALIPFIGHIV 152 >UniRef50_Q2S6D9 Membrane bound his kinase A n=2 Tax=Bacteria RepID=Q2S6D9_SALRD Length = 569 Score = 42.6 bits (98), Expect = 0.009, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 93 TFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKI-------KLWQGLLAGALAQLFVHM 145 + +TH S+VFA+ Y + + P+ G GA+ L Sbjct: 463 LYGTKSLLVGVLTHEFHSLVFALIYAGLLTLLPRWWRTTWIGTAGVGAAWGAVLWLVAGG 522 Query: 146 ISFPL-MGLTPPLFDLPWYENVSEIFGHLVWFWSIEI 181 + P+ + L +P N + + HL+W + + Sbjct: 523 LVMPIWLNLVGIATPVP-NLNPNSLLAHLLWGTVLAV 558 >UniRef50_UPI00016939DD hypothetical protein Plarl_24113 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016939DD Length = 185 Score = 41.4 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 2/90 (2%) Query: 90 AVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFP 149 + G + I+FSI+ + Y ++ G+L G + ++ I P Sbjct: 77 HDFLLTGGGILVGWIYFILFSILGSFVYMLLLGKLK--GPVPGILYGIGWWMVLYYIVGP 134 Query: 150 LMGLTPPLFDLPWYENVSEIFGHLVWFWSI 179 G+ P+ + W +++ L+W I Sbjct: 135 GTGMFAPVTRIGWDTIIADFCLFLLWGLFI 164 >UniRef50_A3X4F2 Putative membrane protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X4F2_9RHOB Length = 163 Score = 41.0 bits (94), Expect = 0.023, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 85 TDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV--AEVFPKIKLWQGLLAGALAQLF 142 D A+ + W H+I I F + + ++ A F ++WQGL G L Sbjct: 56 DDIRASPPVAGEAILGWSA--HVILGIFFGISFALLFGASAFNAPQIWQGLSFGLATVLV 113 Query: 143 VHMISFPLMGLTPPLFDL--PWYENVSEIFGHLVWF 176 ++ PL G + + PW + + H V+ Sbjct: 114 PWLVFQPLFGWGLAMSNAPTPWRMRLKGMITHTVFG 149 >UniRef50_C1YFN2 Putative uncharacterized protein n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YFN2_NOCDA Length = 205 Score = 41.0 bits (94), Expect = 0.025, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%) Query: 104 VTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWY 163 + H + + ++ + +L G + G + P +GL P Sbjct: 42 LAHWGYGAAAGTVFALLPRRVRRWRLA-GPVFGVAVWSAYELAVAPALGLAHARGHRP-R 99 Query: 164 ENVSEIFGHLVWF 176 E + +F H+V+ Sbjct: 100 ERWAFLFDHVVFG 112 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.116 0.314 Lambda K H 0.267 0.0359 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,170,831,528 Number of Sequences: 3077464 Number of extensions: 43907944 Number of successful extensions: 210250 Number of sequences better than 1.0e-01: 60 Number of HSP's better than 0.1 without gapping: 86 Number of HSP's successfully gapped in prelim test: 42 Number of HSP's that attempted gapping in prelim test: 210004 Number of HSP's gapped (non-prelim): 151 length of query: 204 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 81 effective length of database: 661,868,284 effective search space: 53611331004 effective search space used: 53611331004 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.9 bits) S2: 89 (39.1 bits)