16/01/2012 21:46:27 : INFO  : Run start: Mon Jan 16 21:46:26 GMT 2012
16/01/2012 21:46:31 : INFO  : Initialised job
16/01/2012 21:46:32 : INFO  : Renaming log file 'phyre2_20120116_214626.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/86e2e456c6a8d4b9/phyre_20120116_214626.log'
16/01/2012 21:46:32 : INFO  : Initialised job:
Sequence
>batch____
MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ
DDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTF
QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEH
LLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI
AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRT
DRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTL
FIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGL
MNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCP
NGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAK
EREAGEGFGDFTVRAGIIRPVLDPARDLWD

16/01/2012 21:46:33 : INFO  : Checked sequence
16/01/2012 21:46:35 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 21:46:36 : INFO  : PSI-BLAST 3 iterations
16/01/2012 21:49:09 : INFO  : PSI-BLAST 5 iterations
16/01/2012 21:51:22 : INFO  : Finished PSI-BLAST
16/01/2012 21:51:24 : INFO  : Running Buildali to generate a3m file
16/01/2012 22:00:10 : INFO  : Converting to HMM
16/01/2012 22:00:16 : INFO  : Calibrating HMM
16/01/2012 22:00:37 : INFO  : Searching HMM database
16/01/2012 22:14:05 : INFO  : Finished buildali
16/01/2012 22:14:06 : INFO  : Predicting secondary structure
16/01/2012 22:14:10 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 22:14:11 : INFO  : Predicting Disordered regions
16/01/2012 22:14:13 : INFO  : Predicted Disorder (Disopred)
16/01/2012 22:14:14 : INFO  : Running memsat_svm check
16/01/2012 22:20:33 : INFO  : Globular protein
16/01/2012 22:20:34 : INFO  : Predicted Transmembrane (memsat_svm) ID '86e2e456c6a8d4b9'
16/01/2012 22:20:35 : INFO  : Initialising fold library search
16/01/2012 22:20:36 : INFO  : Initialised search input
16/01/2012 22:20:37 : INFO  : Building Ensemble models
16/01/2012 22:20:40 : INFO  : Building hh.c1zj8B_.model.1.pdb
16/01/2012 22:20:47 : INFO  : Building hh.c2akjA_.model.2.pdb
16/01/2012 22:20:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/86e2e456c6a8d4b9/hh.c2akjA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/86e2e456c6a8d4b9/c2akjA_.2.pdb
16/01/2012 22:20:56 : INFO  : Building hh.c5aopA_.model.3.pdb
16/01/2012 22:21:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/86e2e456c6a8d4b9/hh.c5aopA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/86e2e456c6a8d4b9/c5aopA_.3.pdb
16/01/2012 22:21:06 : INFO  : Building c1zj8B_.1.pdb
16/01/2012 22:21:14 : INFO  : Building c2akjA_.2.pdb
16/01/2012 22:21:22 : INFO  : Building c5aopA_.3.pdb
16/01/2012 22:21:32 : INFO  : Building c2v4jA_.4.pdb
16/01/2012 22:21:42 : INFO  : Building c2v4jE_.5.pdb
16/01/2012 22:21:54 : INFO  : Building c3c7bE_.6.pdb
16/01/2012 22:22:08 : INFO  : Building c3c7bA_.7.pdb
16/01/2012 22:22:18 : INFO  : Building d1aopa3.8.pdb
16/01/2012 22:22:28 : INFO  : Building d1aopa4.9.pdb
16/01/2012 22:22:37 : INFO  : Building d1zj8a2.10.pdb
16/01/2012 22:22:53 : INFO  : Building d2akja4.11.pdb
16/01/2012 22:23:07 : INFO  : Building d1zj8a4.12.pdb
16/01/2012 22:23:21 : INFO  : Building d2akja2.13.pdb
16/01/2012 22:23:37 : INFO  : Building d1zj8a3.14.pdb
16/01/2012 22:23:53 : INFO  : Building d3c7bb3.15.pdb
16/01/2012 22:24:08 : INFO  : Building d2v4jb3.16.pdb
16/01/2012 22:24:23 : INFO  : Building d3c7ba3.17.pdb
16/01/2012 22:24:38 : INFO  : Building d2v4ja3.18.pdb
16/01/2012 22:24:53 : INFO  : Building d2akja3.19.pdb
16/01/2012 22:25:08 : INFO  : Building d3c7bb2.20.pdb
16/01/2012 22:26:13 : INFO  : Finished HH model building
16/01/2012 22:26:14 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 22:27:08 : INFO  : html domain output complete ID '86e2e456c6a8d4b9'
17/01/2012 00:23:59 : INFO  : Run end  : Tue Jan 17 00:23:59 GMT 2012
