Phyre 2 alignment of P17846 with c2auvA_

Return to main results | Retrieve Phyre Job Id

Job Description | P17846
Confidence | 28.35% | Date | Thu Jan 5 11:36:18 GMT 2012
Rank | 62 | Aligned Residues | 54
% Identity | 15% | Template | c2auvA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:potential nad-reducing hydrogenase subunit; | PDBTitle: solution structure of hndac : a thioredoxin-like [2fe-2s]2 ferredoxin involved in the nadp-reducing hydrogenase3 complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | E | N | S | M | A | C | V | S | F | P | T | C | P | L | A | M | A | E | A | E | R | F | L | P | S | F | I | D | N | I | D | N | L | M | A | K | H | G | V | S | D | E | H | I | V | M | R | V | T | G | C | P | N | G | C | G | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | Y | P | I | S | V | C | M | G | . | T | A | C | F | . | . | V | K | G | A | D | K | V | V | H | A | F | K | E | Q | L | K | I | D | I | G | D | V | T | . | P | D | G | R | F | S | I | D | T | L | R | C | V | G | G | C | A | L
Template Known Secondary structure |  | S | B |  |  |  |  |  |  |  | . |  |  |  |  | . | . | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S | S | S | . | S | S |  |  | B |  |  | B | S | S | S | S | S | S | S |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . | . |  | . | . | . | . |  |  | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |  | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions