Phyre 2 alignment of P17846 with c2x8qA_

Return to main results | Retrieve Phyre Job Id

Job Description | P17846
Confidence | 14.89% | Date | Thu Jan 5 11:36:18 GMT 2012
Rank | 100 | Aligned Residues | 12
% Identity | 42% | Template | c2x8qA_
PDB info | PDB header:virus | Chain: A: PDB Molecule:capsid protein p27; | PDBTitle: cryo-em 3d model of the icosahedral particle2 composed of rous sarcoma virus capsid protein pentamers
Resolution | 18.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 544 | . | . | . | . | . | 550 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | G | E | G | F | G | D | F | T | V | R | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | S | E | S | F | V | D | F | A | N | R | L
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 160 | . | . | . | . | . | . | . | . | . | 170 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions