09/01/2012 13:30:24 : INFO  : Run start: Mon Jan  9 13:30:23 GMT 2012
09/01/2012 13:30:25 : INFO  : Initialised job
09/01/2012 13:30:26 : INFO  : Renaming log file 'phyre2_20120109_133023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/86d92aa5887b6477/phyre_20120109_133023.log'
09/01/2012 13:30:26 : INFO  : Initialised job:
Sequence
>batch____
MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIA
GGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTS
MAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHL
SRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLL
AIVIVVNVFMARRLSFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFH
QIQLMVCAVLARRYKRQTEQLQAQQESSADKA

09/01/2012 13:30:27 : INFO  : Checked sequence
09/01/2012 13:30:28 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 13:30:28 : INFO  : PSI-BLAST 3 iterations
09/01/2012 13:32:22 : INFO  : PSI-BLAST 5 iterations
09/01/2012 13:34:38 : INFO  : Finished PSI-BLAST
09/01/2012 13:34:38 : INFO  : Running Buildali to generate a3m file
09/01/2012 13:41:11 : INFO  : Converting to HMM
09/01/2012 13:41:13 : INFO  : Calibrating HMM
09/01/2012 13:41:22 : INFO  : Searching HMM database
09/01/2012 13:47:01 : INFO  : Finished buildali
09/01/2012 13:47:02 : INFO  : Predicting secondary structure
09/01/2012 13:47:06 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 13:47:06 : INFO  : Predicting Disordered regions
09/01/2012 13:47:08 : INFO  : Predicted Disorder (Disopred)
09/01/2012 13:47:09 : INFO  : Running memsat_svm check
09/01/2012 13:47:27 : INFO  : Globular protein
09/01/2012 13:47:28 : INFO  : Predicted Transmembrane (memsat_svm) ID '86d92aa5887b6477'
09/01/2012 13:47:29 : INFO  : Initialising fold library search
09/01/2012 13:47:32 : INFO  : Initialised search input
09/01/2012 13:47:33 : INFO  : Building Ensemble models
09/01/2012 13:47:36 : INFO  : Building hh.c1zcdA_.model.1.pdb
09/01/2012 13:47:44 : INFO  : Building c1zcdA_.1.pdb
09/01/2012 13:47:51 : INFO  : Building c3qnqD_.2.pdb
09/01/2012 13:47:58 : INFO  : Building c3iz5d_.3.pdb
09/01/2012 13:48:07 : INFO  : Building d2nwwa1.4.pdb
09/01/2012 13:48:15 : INFO  : Building c2ka1A_.5.pdb
09/01/2012 13:48:23 : INFO  : Building c2ka2B_.6.pdb
09/01/2012 13:48:32 : INFO  : Building c2ka1B_.7.pdb
09/01/2012 13:48:41 : INFO  : Building c2ka2A_.8.pdb
09/01/2012 13:48:54 : INFO  : Building c3k3gA_.9.pdb
09/01/2012 13:49:03 : INFO  : Building c2j5dA_.10.pdb
09/01/2012 13:49:15 : INFO  : Building d2e74d2.11.pdb
09/01/2012 13:49:24 : INFO  : Building d2al1a2.12.pdb
09/01/2012 13:49:30 : INFO  : Building d2fyma2.13.pdb
09/01/2012 13:49:37 : INFO  : Building d1pdza2.14.pdb
09/01/2012 13:49:47 : INFO  : Building d1fqva1.15.pdb
09/01/2012 13:49:57 : INFO  : Building d2akza2.16.pdb
09/01/2012 13:50:06 : INFO  : Building c1r6rA_.17.pdb
09/01/2012 13:50:12 : INFO  : Building d1r6ra_.18.pdb
09/01/2012 13:50:18 : INFO  : Building d1sfka_.19.pdb
09/01/2012 13:50:25 : INFO  : Building d1kpla_.20.pdb
09/01/2012 13:50:41 : INFO  : Finished HH model building
09/01/2012 13:50:42 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 13:52:03 : INFO  : html domain output complete ID '86d92aa5887b6477'
09/01/2012 14:01:26 : INFO  : Run end  : Mon Jan  9 14:01:26 GMT 2012
