Phyre 2 alignment of P39836 with c1ceuA_

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Job Description | P39836
Confidence | 0.64% | Date | Thu Jan 5 12:01:05 GMT 2012
Rank | 57 | Aligned Residues | 23
% Identity | 9% | Template | c1ceuA_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal | PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 55 | . | . | . | . |  | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | .
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Query Sequence |  | R | E | A | I | I | . | A | G | G | G | H | W | R | L | H | L | W | V | M | C | S | T | F | V
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Template Sequence |  | L | E | E | L | K | N | E | A | V | R | H | F | P | R | I | W | L | H | S | L | G | Q | H | I
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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