Phyre 2 alignment of P39836 with d1zara1

Return to main results | Retrieve Phyre Job Id

Job Description | P39836
Confidence | 0.48% | Date | Thu Jan 5 12:01:05 GMT 2012
Rank | 98 | Aligned Residues | 18
% Identity | 6% | Template | d1zara1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Rio2 serine protein kinase N-terminal domain
Resolution | 1.75

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 255 | . | . | . | . | 260 | . | . | . | . |  | . | . | . | . | . | 270 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query Sequence |  | S | F | N | K | A | D | E | I | T | I | . | V | F | C | G | S | K | K | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | M | G | K | H | S | W | R | I | M | D | A | I | F | K | N | L | W | D
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions