BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (70 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 125 4e-28 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 114 7e-25 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 107 1e-22 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 102 4e-21 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 100 1e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 88 8e-17 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 86 3e-16 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 86 4e-16 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 84 1e-15 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 84 1e-15 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 82 7e-15 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 81 1e-14 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 81 1e-14 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 81 1e-14 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 81 1e-14 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 81 1e-14 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 80 2e-14 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 80 3e-14 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 79 5e-14 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 78 7e-14 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 77 2e-13 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 77 2e-13 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 77 2e-13 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 76 3e-13 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 76 3e-13 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 76 3e-13 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 76 4e-13 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 75 4e-13 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 75 5e-13 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 75 6e-13 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 75 6e-13 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 75 8e-13 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 74 9e-13 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 74 1e-12 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 74 1e-12 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 74 1e-12 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 74 2e-12 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 74 2e-12 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 74 2e-12 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 73 2e-12 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 73 3e-12 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 73 3e-12 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 73 3e-12 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 72 4e-12 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 72 4e-12 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 72 5e-12 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 72 7e-12 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 72 7e-12 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 72 8e-12 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 71 9e-12 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 71 1e-11 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 71 1e-11 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 71 1e-11 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 71 1e-11 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 71 1e-11 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 71 1e-11 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 71 1e-11 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 71 1e-11 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 70 1e-11 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 70 2e-11 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 70 2e-11 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 70 2e-11 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 70 2e-11 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 70 2e-11 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 70 2e-11 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 70 2e-11 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 70 3e-11 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 69 3e-11 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 69 3e-11 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 69 4e-11 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 69 4e-11 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 69 4e-11 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 69 4e-11 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 69 4e-11 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 69 4e-11 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 69 6e-11 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 69 7e-11 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 68 7e-11 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 68 7e-11 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 68 9e-11 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 67 2e-10 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 67 2e-10 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 67 2e-10 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 67 2e-10 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 67 2e-10 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 67 2e-10 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 67 2e-10 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 67 2e-10 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 67 2e-10 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 67 2e-10 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 66 3e-10 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 65 5e-10 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 65 6e-10 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 65 6e-10 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 65 7e-10 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 65 9e-10 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 65 9e-10 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 65 1e-09 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 64 1e-09 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 64 1e-09 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 64 2e-09 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 64 2e-09 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 64 2e-09 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 64 2e-09 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 63 3e-09 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 63 3e-09 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 63 3e-09 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 63 3e-09 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 63 3e-09 UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodoc... 62 6e-09 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 62 6e-09 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 62 6e-09 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 62 6e-09 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 61 1e-08 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 61 1e-08 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 60 2e-08 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 60 2e-08 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 60 2e-08 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 60 2e-08 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 60 3e-08 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 60 3e-08 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 59 3e-08 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 59 4e-08 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 59 5e-08 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 59 6e-08 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 59 6e-08 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 59 7e-08 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 58 8e-08 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 58 8e-08 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 58 8e-08 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 58 8e-08 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 58 9e-08 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 58 1e-07 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 58 1e-07 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 57 1e-07 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 57 1e-07 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 57 1e-07 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 57 2e-07 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 57 2e-07 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 57 2e-07 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 57 2e-07 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 57 2e-07 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 57 2e-07 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 57 2e-07 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 57 2e-07 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 57 2e-07 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 57 2e-07 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 57 2e-07 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 57 2e-07 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 56 3e-07 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 56 3e-07 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 56 4e-07 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 56 4e-07 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 55 5e-07 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 55 5e-07 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 55 5e-07 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 55 5e-07 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 55 5e-07 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 55 5e-07 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 55 5e-07 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 55 6e-07 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 55 7e-07 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 55 7e-07 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 55 8e-07 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 55 8e-07 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 55 9e-07 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 55 9e-07 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 55 9e-07 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 55 9e-07 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 55 9e-07 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 54 1e-06 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 54 1e-06 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 54 1e-06 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 54 1e-06 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 54 1e-06 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 54 1e-06 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 54 2e-06 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 54 2e-06 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 54 2e-06 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 54 2e-06 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 54 2e-06 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 54 2e-06 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 53 3e-06 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 53 3e-06 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 53 3e-06 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 53 4e-06 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 53 4e-06 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 53 4e-06 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 53 4e-06 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 53 4e-06 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 52 4e-06 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 52 5e-06 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 52 5e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 52 5e-06 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 52 5e-06 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 52 6e-06 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 52 6e-06 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 52 6e-06 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 52 6e-06 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 52 7e-06 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 52 7e-06 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 52 8e-06 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 51 9e-06 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 51 1e-05 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 51 1e-05 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 51 1e-05 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 51 1e-05 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 50 2e-05 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 50 2e-05 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 50 2e-05 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 50 2e-05 UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family pro... 50 2e-05 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 50 3e-05 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 50 3e-05 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 50 3e-05 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 49 3e-05 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 49 3e-05 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 49 4e-05 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 49 4e-05 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 49 4e-05 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 49 4e-05 UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Plancto... 49 5e-05 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 49 5e-05 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 49 6e-05 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 49 7e-05 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 48 7e-05 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 48 7e-05 UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 48 8e-05 UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=La... 48 8e-05 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 48 8e-05 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 48 8e-05 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 48 8e-05 UniRef50_UPI000169964E Cold-shock DNA-binding protein n=1 Tax=En... 48 8e-05 UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 48 8e-05 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 48 9e-05 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 48 9e-05 UniRef50_Q1PZB4 Putative uncharacterized protein n=1 Tax=Candida... 48 9e-05 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 48 9e-05 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 48 1e-04 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 47 1e-04 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 47 1e-04 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 47 2e-04 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 47 2e-04 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 47 2e-04 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 47 2e-04 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 47 2e-04 UniRef50_A0PKE1 DNA-binding protein n=2 Tax=Mycobacterium RepID=... 47 2e-04 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 46 3e-04 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 46 3e-04 UniRef50_B5XEM2 Nuclease-sensitive element-binding protein 1 n=1... 46 3e-04 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 59/70 (84%), Positives = 65/70 (92%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ K+TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN+F+TL ENQEVEF E GPK Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 55/70 (78%), Positives = 60/70 (85%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWF+ KGFGFI+P DGSKDVFVHFSAIQ ND+KTL E Q VEF IE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 49/68 (72%), Positives = 60/68 (88%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ+++++TL E Q+V F IE+G K Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAVHVV 68 GPAA +V+ Sbjct: 61 GPAAANVI 68 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 49/68 (72%), Positives = 56/68 (82%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 +K+ G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N FKTL E Q VEF I NG KGP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAVHVVAL 70 +A +V+AL Sbjct: 62 SAANVIAL 69 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/67 (73%), Positives = 54/67 (80%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHFSAIQ N FKTL E Q VEF I++G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AVHVVAL 70 AV+V A+ Sbjct: 63 AVNVTAI 69 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 48/62 (77%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VKWFN EKG+GFITP DGSKD+F H+S I S +K+L ENQ V F + GPKGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 HV 67 ++ Sbjct: 63 NI 64 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 41/64 (64%), Positives = 46/64 (71%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKG+GFI P+D S DVFVHFSAIQ N FK L EN VEF ++GPKG A + Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VVAL 70 V L Sbjct: 64 VTKL 67 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 41/67 (61%), Positives = 47/67 (70%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ TG VKWFN EKGFGFITP+ G D+FVHF AI+S+ FK+L E Q V F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAVHV 67 G A V Sbjct: 82 GMQAAQV 88 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/63 (63%), Positives = 47/63 (74%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+ +KG+GFIT DG DVFVHFSAI+ N FK+L + +VEF I NGPKGP A Sbjct: 25 TGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAA 84 Query: 66 HVV 68 VV Sbjct: 85 KVV 87 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN EKGFGFI +DG DVFVHFSAIQ + +K+L E Q+VEF I +G +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGD-DVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 VHVVAL 70 +VV L Sbjct: 60 ANVVKL 65 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 36/65 (55%), Positives = 47/65 (72%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VKWFN KGFGFI P G D+F HFS I+++ FK+L ENQ V+F ++NGPKG A Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 66 HVVAL 70 ++ L Sbjct: 80 NITPL 84 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+P KG+GFI +DG DVFVHFSAI+ N FKTL E Q VEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 VHVVAL 70 VV L Sbjct: 60 ADVVKL 65 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/46 (84%), Positives = 41/46 (89%) Query: 15 EKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +KGFGFITP DGSKDVFVHFSAIQSNDFKTL E Q+VEF IENG K Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+PEKG+GFI ++G DVFVHFSAIQ FKTL E Q+VEF I G +GP A Sbjct: 1 MVGKVKWFSPEKGYGFIA-REGGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 VHVV 68 +V+ Sbjct: 60 ANVI 63 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/64 (60%), Positives = 43/64 (67%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFITP D DVFVH+S IQ+ FKTL EN V+F I G KGP A Sbjct: 4 GTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQATG 63 Query: 67 VVAL 70 V + Sbjct: 64 VTLV 67 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 NKM-TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 NKM TG VKWFN KGFGFITP +G DVF HFS I + F++L ENQ V F I GPKG Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAVHV 67 A ++ Sbjct: 102 KQASNI 107 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKG+GFIT +DGS DVFVHFSAIQ + +KTL E Q V F +E+ +GP AV+ Sbjct: 4 GTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAVN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG VKWFN EKGFGFI DG+ DVFVHFSAI + FK+L E QEV F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 KNVVKL 67 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KGFGFI KD DVFVH+SAIQS+ FKTL E Q V F ++ G KGPAAV+ Sbjct: 28 GKVKWFNEQKGFGFIE-KDEGGDVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVN 86 Query: 67 V 67 V Sbjct: 87 V 87 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN +KGFGFI+ +DG KD F+HFS I FKT+ E +EVEF IE+G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 VHVVA 69 +VV+ Sbjct: 60 TNVVS 64 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + TG VKWF+ +KGFGFI P DG +D+FVH ++I+S+ F+TL+E + VEF +++G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 PA-AVHVVAL 70 AV V A+ Sbjct: 64 RTKAVEVTAV 73 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KGFGFIT ++GS DVFVHFSAIQ + FK+L E Q V F +E +GP AV+ Sbjct: 4 GTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAVN 62 Query: 67 VV 68 V Sbjct: 63 VT 64 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/62 (58%), Positives = 42/62 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP G +D+F HFSAI FKTL E Q+V F + GPKG A Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 66 HV 67 ++ Sbjct: 63 NI 64 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+ +KG+GFIT +G DVFVH+SAI+ FKTL E Q VEF I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 VHV 67 HV Sbjct: 60 AHV 62 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KG+GFIT +DG+ DVFVHFSAIQ++ FKTL E Q+V F E+ +GP A + Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VV 68 VV Sbjct: 63 VV 64 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/62 (58%), Positives = 42/62 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI DG DVF H +AIQ++ F+TL E Q+VEF GPKG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 HV 67 +V Sbjct: 63 NV 64 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/63 (63%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN EKGFGFI +G DVFVHFSAIQ + FKTL E QEV F I G +GP A Sbjct: 2 QTGKVKWFNSEKGFGFIEV-EGGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQA 60 Query: 65 VHV 67 +V Sbjct: 61 ANV 63 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 41/62 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP G D+F HFS +Q N FK+L E Q+V + G KGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 HV 67 + Sbjct: 122 KI 123 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ G VKWFN KGFGFITP+ G+ D+FVHF +IQ FK+L E Q+V F + NG K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GLQADEV 66 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 44/67 (65%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 N TG VKWFN KGFGFIT G +DVF H +AI + F+TL E Q+V+F + GPKG Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAVHVVA 69 A +V A Sbjct: 93 QAQNVRA 99 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFI ++G DVFVHFSAIQ + FK+L E Q V F +E G +GP A + Sbjct: 4 GTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAAN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS +M G+VKWFN KGFGFITP+ G D+FVHF AIQ FK+L E Q+V F G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESGP-DLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAVHVVAL 70 G A V A+ Sbjct: 60 GMQADQVQAV 69 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 40/61 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFNP KG+GFI P G KDVFVH SA+Q ++L E Q+++F IE G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 V 65 Sbjct: 93 A 93 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN EKGFGFI G DVFVHF+AIQSN+ K L E Q+V+F +E GPKG A Sbjct: 3 TGTVKWFNSEKGFGFIEV-PGENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 ANVVKL 67 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI + G DVF HFSAI S+ FKTL E Q V+F + G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 HVVAL 70 ++V + Sbjct: 64 NIVCI 68 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + +G VKWFN EKGFGFITP+ G D+FVHF AIQ N FK+L E Q+V F G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESGP-DLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 32/59 (54%), Positives = 44/59 (74%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 +++TG VKWFN +KGFGFITP DG D+FVH S+I+S F++L E + VEF +E+ G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDG 60 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G+ D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAA--VHVVA 69 G A V VVA Sbjct: 60 GLQADQVQVVA 70 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN EKG+GFI +DG+ DVFVH+SAI+ + FKTL E Q+VEF + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 VHV 67 V Sbjct: 61 SKV 63 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND--FKTLTENQEVEFGIENGPKGP 62 +TG VKWF+ EKG+GF+T D DVFVHFSAI N FKTL + Q VEF ++ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAVHVVAL 70 A +V L Sbjct: 63 RAKNVRVL 70 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K G+VKWFN KG+GFI G +DVFVHFSAIQ + +KTL E + VEF + GPKG Sbjct: 21 KENGVVKWFNGAKGYGFIQRSTG-EDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AVHVV 68 A +VV Sbjct: 80 AANVV 84 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFNPEKG+GFI+ ++G DVFVHFSAI +KTL E Q VEF + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGD-DVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 VHV 67 V+V Sbjct: 60 VNV 62 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFI +G DVFVHFSAI +K+L E Q VEF + G +GP A + Sbjct: 4 GTVKWFNAEKGFGFIEV-EGENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAAN 62 Query: 67 VVAL 70 VV L Sbjct: 63 VVKL 66 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 HVVAL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 66 HVVAL 70 +V L Sbjct: 86 VIVPL 90 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 2/65 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI+ +D DVFVH++AI+ N +++ L ENQEVEF I GPKG A Sbjct: 4 GKVKWFNATKGFGFISTED-QGDVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQAC 62 Query: 66 HVVAL 70 +V L Sbjct: 63 NVKKL 67 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 44/65 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P DG KDVFVH SA++ K L++NQ++ + +++G G ++ Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 66 HVVAL 70 + L Sbjct: 78 GDLRL 82 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESGP-DLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAVHV 67 G A V Sbjct: 156 GMQADKV 162 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 40/62 (64%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFI G DVF HFS I ++ ++ L E Q V F + G KGP AV+ Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VV 68 +V Sbjct: 64 IV 65 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGPA 63 G VKWFN EKG+GFI +GS+DVF HFSAIQ+ FK L E EVEF IE G KGP Sbjct: 3 VGKVKWFNAEKGYGFIE-TEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQ 61 Query: 64 AVHVV 68 A ++V Sbjct: 62 ARNIV 66 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P G+KDVFVH SA++ + L +NQ+V F IE G G A Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 Query: 66 HVVAL 70 +AL Sbjct: 115 VNLAL 119 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 42/62 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI P+DG +D+F H+S IQ +++L QEV F ++ GPKG A Sbjct: 3 VGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAE 62 Query: 66 HV 67 ++ Sbjct: 63 NI 64 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN EKG+GFIT +G +D+FVH+SAI ++ +KTL E QEV F + GP+G A Sbjct: 3 TGKVKFFNAEKGYGFITI-EGGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 HVVAL 70 +V + Sbjct: 62 NVRGI 66 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 43/67 (64%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +M+G VKW++P KGFGF++ KDG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAVHVV 68 A + Sbjct: 233 REAQSIT 239 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP ++ Sbjct: 66 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNIT 125 Query: 69 AL 70 ++ Sbjct: 126 SV 127 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +M G VKWFN +KG+GFI+ + G KDVFVH+S + FK+L E +VEF + G KGP Sbjct: 19 EMKGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AVHVVAL 70 A +V L Sbjct: 78 ATNVTKL 84 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/64 (53%), Positives = 44/64 (68%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWF+ +KG+GFIT +D + DVFVHF+ IQ FKTL + Q+VEF + KGP A + Sbjct: 5 GTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAKN 64 Query: 67 VVAL 70 V L Sbjct: 65 VRVL 68 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKG+GFIT +DG KDVFVH+S+I S FKTL E Q V + + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 HVVAL 70 +V + Sbjct: 82 NVTVV 86 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 41/62 (66%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V+F + GPKG A Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 Query: 67 VV 68 +V Sbjct: 64 IV 65 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VK+FN +KGFGFI +DG DVFVHFS IQ++ FKTL E Q V + ++ +G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGV-DVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 65 VHVVAL 70 ++VVA+ Sbjct: 85 INVVAI 90 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++PEKG+GFI DG D+FVH SAI ++ L E VEF + + PKGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 HV 67 HV Sbjct: 60 HV 61 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 31/58 (53%), Positives = 42/58 (72%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + G VKWF+ +KGFGFITP DG +D+FVH S I+S F++L E + VEF +E+G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDG 65 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 43/66 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN KGFGFI P+ G +DVF HFSAI + F+TL + V F + +GPKG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 VHVVAL 70 ++ L Sbjct: 62 QNIAPL 67 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/62 (51%), Positives = 40/62 (64%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+ KWFN +KGFGF+TP DG KDVFVH I+ + F++L EN+ VEF KG A Sbjct: 73 GICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEATL 132 Query: 67 VV 68 V Sbjct: 133 VT 134 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS-NDFKTLTENQEVEFGIENGPKGPAA 64 T VKWF+ +KG+GFI D +DVFVH+S IQS +DFKTL +Q V F + +GPKG A Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHA 62 Query: 65 VHVVAL 70 + V L Sbjct: 63 LEVAPL 68 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + G+VKWFN KGFGFI +D +D+FVHF AIQ + +++L + ++VEF + G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFI-QRDSGEDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GLQAEEV 66 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 41/63 (65%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 +G+VKWFN EKGFGFI G DVF H+S I + F+ L E Q+V F I G KGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 HVV 68 ++V Sbjct: 63 NIV 65 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 3/69 (4%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF--KTLTENQEVEFGIENGPKG 61 K G +WF+ +KG+GFI DG KD+FVH+S+IQ+ F KTL EN +VEF ++ G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 62 PAAVHVVAL 70 AV VV + Sbjct: 64 AQAVDVVVV 72 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 43/64 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +G +D+F H+SAI + +KTL Q+V F I G KG A+ Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 HVVA 69 ++VA Sbjct: 104 NIVA 107 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 42/67 (62%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +MTG VKW++P KGFGF++ DG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAVHVV 68 A + Sbjct: 272 REASSIT 278 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP V Sbjct: 82 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKGPA 63 TG VK+FN KGFGFITP +G KDVFVH SA++++ ++L + Q+V F +E KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AVHVVA 69 AV++ A Sbjct: 64 AVNLSA 69 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG VKWFN KG+GFI +G+ DVFVH+ AI+ + ++L E Q+VEF + G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI ++G +DVFVH S I ++ FK+L E +V F IE G KGPAA + Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVAL 70 V + Sbjct: 63 VTVV 66 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 1 MSNKM-TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 MS ++ +G+VKWFN EKGFGFI ++G DVFVHF AI +TL E Q+V F + G Sbjct: 28 MSGQLVSGIVKWFNDEKGFGFI-EREGGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQ 86 Query: 60 KGPAAVHV 67 KGP A +V Sbjct: 87 KGPQAENV 94 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 68.9 bits (167), Expect = 4e-11, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + TG V WFN KG+GFITP DGS ++FVH S+I S +++LT VEF I G G Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69 Query: 64 -AVHVVA 69 AV+V A Sbjct: 70 KAVNVTA 76 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGFI G DVFVH+SAI + F++L ENQ V F + +G +GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHG-EGPQAE 61 Query: 66 HV 67 +V Sbjct: 62 NV 63 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 44/59 (74%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG+V+WF+ +KGFGFITP +G +D+FVH S+I+S+ F++L E + VEF I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDG 62 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 ++ G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L + VEF +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAVHV 67 P A+ V Sbjct: 73 PKAIEV 78 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 42/59 (71%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 +K+ G VKWF+ +KGFGF+ P DGS +VFVH SAI +N F++L + + VEF + P G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNG 98 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 45/68 (66%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN KGFGFI P DGS+++FVH + I F+++ E +EVE+ +++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAVHVV 68 P AV+V Sbjct: 61 APKAVNVT 68 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 68.2 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KGFGFITP DG +D+FVH S+++S+ +++L + VEF + +G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 -PAAVHVVA 69 AV+V A Sbjct: 63 RTKAVNVTA 71 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKGPA 63 TG+VK+FN +KGFGFI P +G D+FVH SA+Q++ L+ENQ+V F E KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AVHV 67 AV++ Sbjct: 64 AVNL 67 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDG-SKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 + K+ G+ +WFN +KGFGF+ D S+D+F H + I+ F++L E +EVEF + G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAVHVVAL 70 KGP A+ +V Sbjct: 69 KGPQAIEIVRF 79 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 39/63 (61%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++G VKWFN KG+GFI G +D+F H+SAIQ ++TL Q V F I GPKG A Sbjct: 8 LSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLHA 67 Query: 65 VHV 67 + Sbjct: 68 TDI 70 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 39/63 (61%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKW+NPEKGFGFI + G KDVFVH + + + L+E Q V + GPKG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAA 64 P A Sbjct: 228 PEA 230 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFNPEKGFGF+ DGS DVF+H A+++ +++ ++ + G KG V+ Sbjct: 70 VKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEVL 129 Query: 69 AL 70 + Sbjct: 130 EV 131 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/57 (49%), Positives = 41/57 (71%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++G+ KWF+ KGFGFITP DGS+D+FVH I+ F++L +++ VE+ IE KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKG 67 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKGP 62 TG VK+FN EKGFGFI P DG D+FVH SA+Q++ L +NQ+V + E KGP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 63 AAVHVV 68 AV++ Sbjct: 75 KAVNIT 80 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 2/70 (2%) Query: 2 SNKMT-GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S KM+ G VKWFN KGFGFI +D DVFVHFSAI+ +K L E V F + G K Sbjct: 64 SYKMSEGTVKWFNASKGFGFIA-QDNGNDVFVHFSAIKMEGYKALEEGARVRFDVVKGNK 122 Query: 61 GPAAVHVVAL 70 GPAA +V L Sbjct: 123 GPAADNVELL 132 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGF++ +D DVFVH+ AI + +TL E Q+V F + G KG A Sbjct: 7 TGTVKWFNDEKGFGFLS-RDNDSDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 66 HVVAL 70 +V L Sbjct: 66 NVTPL 70 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 40/61 (65%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G KWFN KG+GF+TP DG ++VFVH S IQ + F++L E +EVEF + +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ +AI + K+L E Q+VEF Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAVHVVAL 70 GP+A V+A Sbjct: 60 GPSAADVIAF 69 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS-NDFKTLTENQEVEFGIENGPKGPAAV 65 G+VKWF+ +KG+GFI +G D+FVH+S I S FKTL Q VEF + GPKG A Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLHAR 65 Query: 66 HVVAL 70 +VV L Sbjct: 66 NVVPL 70 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ G VKWFN EKG+GFI K G KDVFVH SAI KTL E Q+V + G K Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQK-GGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 65.5 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 27/51 (52%), Positives = 36/51 (70%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 +G+VKWFNP KGFGFI P+ G +D+FVH SA++ L E Q V+F +E Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLE 233 Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 27/51 (52%), Positives = 33/51 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 +G VKWFN KGFGFI P DG +DVFVH SA+ L E +VE+ +E Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELE 108 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 36/62 (58%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V+WFN E+GFGF+ P DGS D+FVH S I + + L E Q V F + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 HV 67 V Sbjct: 115 DV 116 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +DG +DVFVH+S I ++ ++ LTE + VE+ ++ GPKG A Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 HV 67 V Sbjct: 62 QV 63 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGS-KDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN KGFGFI + S +D+FVHFSAI+ + +KTL Q+V F + +GPKG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AVHV 67 A+ + Sbjct: 62 AIKI 65 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 28/50 (56%), Positives = 33/50 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGI 55 TG VKWFNPEKGFGFI P DG D FVH SA++ L E Q+V + + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDL 99 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN +KGFGFI ++G +D+FVHF A+ L E Q+VE+ I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AVHVVAL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK++G VKWFN ++G+GFI D +DVFVH +AIQ+N+ +++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 NGPKGPAAVHVV 68 +GPKG A +V Sbjct: 85 SGPKGLEAANVT 96 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 36/50 (72%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 G+VKWFNP KGFGFI P+DG +DVFVH +A++ + L E +V + +E Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEME 53 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 33/49 (67%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 +VKWFN KGFGFI P +G D+FVH SA++ + L E Q+V + +E Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELE 163 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 38/64 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFNP KG+GF+ P DG KDVFVH SA++ + +L E +V + + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVAL 70 + L Sbjct: 116 NLRL 119 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G VKWFN KGFGFI P DG+ DVFVH SA++ ++L E Q+V + I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN--DFKTLTENQEVEFGIENG 58 M+ + G VKWFN EKG+GFI ++G KDVFVHF + +L+E Q+V F + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 PKGPAAVHVVAL 70 KGP A +V L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/50 (58%), Positives = 32/50 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGI 55 TG VKWFN KGFGFI P G DVFVH SA+Q TL E Q+V + I Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEI 93 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF-KTLTENQEVEFGIENGPKGPAAV 65 G VKWFN +KG+GFI P DGSKDVFVH + + + + L E +EV + +E PKG +A+ Sbjct: 5 GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSAM 64 Query: 66 HVVAL 70 +V L Sbjct: 65 NVERL 69 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 33/48 (68%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 TG VKWFN KGFGFI P DGS DVFVH SA++ + L + Q++ + Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISY 51 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVV 68 G KG A V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 41/56 (73%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 + ++ +G KWFN KG+GFI P++G D+FVH +AI++ F++L E ++VEF +E Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVE 75 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWFN KGFGFI+ +D DVFVHF AI+ + L E Q VEF I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFIS-RDSGDDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAVHVV 68 A VV Sbjct: 231 LQAEDVV 237 >UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodococcus RepID=Q9RBP7_9NOCA Length = 57 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 39/57 (68%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + +W+N EKGFG +TP DGSKD FVHF+A++S + +++ ++ + KGPAA Sbjct: 1 IARWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSISGRRKHRKRLNTPAKGPAA 57 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQS-NDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ +KG+GFI DG +D+FVHFSAI S FK L ++ EVEF I+ KG A +V Sbjct: 7 VKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQAKNV 66 Query: 68 VAL 70 + Sbjct: 67 CEI 69 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVV 68 G KG A V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 25/48 (52%), Positives = 33/48 (68%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 TG VKWFN KG+GFI P +G KDVFVH SA++ + L E Q++ + Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISY 50 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND--FKTLTENQEVEFGIENGPKGPAA 64 G V+WF+ E+GFGF+ DG+ D+FVH S I ND ++L E Q VEF I G +GP A Sbjct: 4 GTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQA 63 Query: 65 VHV 67 V Sbjct: 64 RRV 66 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G V W+ P KG+GF+TP G ++F H SAI + E Q V F + G KGP A H Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQADH 139 Query: 67 V 67 + Sbjct: 140 L 140 Score = 48.1 bits (113), Expect = 7e-05, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+V ++ E+GFGFITP G D+FVH S ++ + L E V F + +GP A Sbjct: 256 GVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQADR 313 Query: 67 V 67 V Sbjct: 314 V 314 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 V W++ KGFGF+TP G D FVH ++ + L E V F + G +GP A V Sbjct: 165 VSWYDAGKGFGFVTPDSGEPDAFVHARSL-AGGATELVEGDRVSFSVVPGDRGPQAQDV 222 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 42/67 (62%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFNP K FGFI ++G KDVFVH SA+ + L E Q+V F +E+ Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAVHV 67 +AV++ Sbjct: 61 KISAVNL 67 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V+ F+ EKG+GFI G K VF H++ IQS D+KTL ++V+ + +GPKG AV Sbjct: 3 TGTVESFDKEKGYGFIETASGDK-VFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLIAV 61 Query: 66 HV 67 V Sbjct: 62 KV 63 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++TG+VKWF+ KG+GFI P++G DV VH S ++ + L E V PK Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAVHVV 68 G A+ VV Sbjct: 94 GAQAIRVV 101 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 32/54 (59%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 +VKWFN +G+GF+T +G+ D+F+H ++ + L Q++ GPKG Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKG 190 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K++G VK + +KGFGFI K G DVFVHFSAIQ+ + LT QEV+ + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIELK-GEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAVHVVAL 70 A V L Sbjct: 61 QAAAVEVL 68 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+P +G+GF+ P +G DVF+H S + D L E +EF IE KG AV Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDED---LEEGDRLEFEIEETEKGLNAV 59 Query: 66 HVVAL 70 ++ AL Sbjct: 60 NIEAL 64 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 34/60 (56%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN KGFGF+ P DG+ D F+H S + L E EV I GPKGP + +V Sbjct: 47 VKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRLV 106 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G VKWF +KGFGF+T DG KDVFVH S ++ ++L + V + PKG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AVHVVAL 70 A + L Sbjct: 192 ATWIQLL 198 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G+ KWFN +KG+GFIT ++G +DVFVH S I ++ F++L EN++VE + Sbjct: 3 RLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRKK 61 Query: 64 AVHVVA 69 A+HV Sbjct: 62 AIHVTG 67 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 39/62 (62%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK + E+G+G+ITP G +DVFVHF+ I FK L + ++V + + G K P A Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 HV 67 V Sbjct: 63 QV 64 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/46 (63%), Positives = 32/46 (69%) Query: 15 EKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 EKGFGFIT +G DVFVHF AI S FKTL E Q+V F +E G K Sbjct: 1 EKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 41/64 (64%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+VKWFN KGFGFI+ + D+F H+S I+ + +++L Q+V+F + + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVAL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G VK F+ GFGFITP D +D+F+H S+++ +D+++L ++ +E + +G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 G-PAAVHVVAL 70 G AV V AL Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 40/63 (63%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+ ++GFGFI P +G +++F H I +KTL Q V + +E+G G AV Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 HVV 68 +++ Sbjct: 64 NII 66 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 36/61 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G V WF+ EKGFGFITP D S VFV F AI++ ++TL V + E GP AV Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 67 V 67 V Sbjct: 114 V 114 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ EKGFGF++ +DG +DV+V SA+ + + L Q VEFG+ G +GP A+ Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPAG-VEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 HV 67 + Sbjct: 74 SL 75 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 6/62 (9%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTL------TENQEVEFGI 55 S + G VKWFN KGFG+ITP DG DVFVH SA++ F+ T+ VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EN 57 E+ Sbjct: 68 EH 69 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 40/64 (62%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWF+ G+GFI+P+DG D++VH +AI + K+L Q+VEF GP+A Sbjct: 6 GKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAED 65 Query: 67 VVAL 70 V+A Sbjct: 66 VIAF 69 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQ----SNDFKTLTENQEVEFGIENGPKGP 62 G VK+F +KGFGFI P DG +DVFVH++ I+ +N FK L E VE+ + KG Sbjct: 4 GTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKGT 63 Query: 63 AAVHVVAL 70 A VV L Sbjct: 64 QAKDVVKL 71 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ KM G VKW++P G G I+P DG D++V+ + I S K L E Q VEF G + Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAVHVVA 69 A V+A Sbjct: 60 SQMAEDVIA 68 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 35/53 (66%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 K G+V WFN KGFGF+T DG DVFVH S I + F++L + + VEF +E Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELE 95 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 38/62 (61%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KG+GFI S D+F HFS++Q + +KTL Q V F + KG A++ Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VV 68 +V Sbjct: 64 IV 65 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIEN 57 + K+ G VKWFN + G+GFI D ++D+FVH +AI +N+ ++L +N+EV F I Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GPKGPAAVHVV 68 G KG A V Sbjct: 78 GSKGLEAASVT 88 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN KGFGFI D+FVH SA+ + EN +V F IE+G KG AV Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAV 193 Query: 66 HVVAL 70 ++ L Sbjct: 194 NIKLL 198 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF-KTLTENQEVEFGIENGP 59 M+N TG VKW++ E+G+GF++ DG +DVF+H S I+ F K + E + + F I Sbjct: 1 MAN-YTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQE 58 Query: 60 KGPAAVHV 67 KGPAA++V Sbjct: 59 KGPAAINV 66 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++ VKWFN KGFGF+ P DGS D F+H SA++ + E + + G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 VHV 67 V V Sbjct: 109 VMV 111 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 37/63 (58%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G+VK+F+ EKGFGF+ G KDVFVH A++ + KTL Q V G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAA 64 P A Sbjct: 192 PQA 194 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 32/55 (58%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 G VKW++P+KGFGFI P G KD FVH +A+ + L E Q V G KG Sbjct: 136 GTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKG 190 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/42 (57%), Positives = 32/42 (76%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTL 45 + G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G KWF+ K +GF+TP DGS DVFVH I+ +++L N+EVE+ + KG A Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREATT 124 Query: 67 VVAL 70 V + Sbjct: 125 VTGV 128 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKG 61 + +G VK+F +KGFGFITP +G DVFVH SA++ + TL Q + F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAVHV 67 P AV + Sbjct: 181 PKAVEL 186 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+TG+VKWFN + G+GFI D +DVFVH SAI N+ +++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 IGEKGNEAANVTG 156 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 116 EGEKGAEAANVTG 128 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + G VKWF+PEKG+GF+ + G +D+FVH S ++ D +L + EVE+ + +G Sbjct: 131 SQREQGRVKWFDPEKGYGFLV-RPGGEDLFVHHSEVE-GDASSLGQGVEVEYEVGRNERG 188 Query: 62 PAAVHVVAL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 36/55 (65%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 G VK+FN +KG+GFI +DGS D FVH +A+Q+ TL + Q V + +E G G Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNG 80 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M++K+ G VKWFN KG GFI +D DVFVH+ +I S KTL + Q V F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFI-QRDNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GRQASEV 66 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK+TG VKWFN + G+GFI D +DVFVH SAI N+ +++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 80 IGEKGHEAANVTG 92 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPK 60 + G VKWFN + G+GFI D D+FVH +A+ N+ ++L + ++VEF + G K Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 61 GPAAVHVVA 69 GP A +V Sbjct: 118 GPEAANVTG 126 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 81 EGEKGAEAANVTG 93 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++++++G VKWFN + G+GFI D +DVFVH +AI N+ +++ + ++VEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 89 EGEKGNEAANVTG 101 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 38/62 (61%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KG+GFI + +D+F+H+S+I + +KTL Q V F G +G AV Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63 Query: 67 VV 68 ++ Sbjct: 64 IM 65 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 8/71 (11%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSA----IQS----NDFKTLTENQEVEFGIENG 58 G KWFN KG+GFITP +G DVFVH ++ IQS + F++L + V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 PKGPAAVHVVA 69 P+G A VV+ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPK 60 +TG VKWFN ++G+GF+ D +D+F+H SAI ++ K++ E +E+ F I G K Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAVHVVAL 70 G A +V A+ Sbjct: 89 GNEAANVSAI 98 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK---TLTENQEVEFGIEN 57 ++ K+TG VKWFN + G+GFI D +DVFVH SAI +N K ++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GPKGPAAVHVVA 69 G KG A +V Sbjct: 119 GEKGNEAANVTG 130 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG +VFVH SA+ S +L Q VEFG+ G +G A+ Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGG-EVFVHSSALPSG-VTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 HVVAL 70 V L Sbjct: 65 SVRTL 69 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 32/48 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 TG VKWFN KGFGFI P +G DVFVH + ++ + TL E +V++ Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKY 56 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +S K+TG+VKWFN + G+GFI D +D+FVH SAI N+ +++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 84 EGEKGHEAANVTG 96 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 55.5 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G+VK F+ GF FITP DGS+D+F+H S+++ + +++L ++ +E + + Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 G-PAAVHVVA 69 G AV V A Sbjct: 62 GRTKAVDVTA 71 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ +KGFGF++ ++G +DV+V SA+ + + L Q VEFGI +G +GP A+ Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPAG-VEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 HVVAL 70 + L Sbjct: 111 SLKLL 115 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG +VF+H SA+ TL Q VEFGI G KG A+ Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGG-EVFLHASALPPG-TTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 HVVAL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSK---DVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 G KWFN ++G+GFITP S+ DVFVH S+I F++L E V+F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AVHVV 68 AV VV Sbjct: 89 AVKVV 93 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G+VK+F+ +KGFGF+ P G KDV+V +Q L + Q V I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 32/61 (52%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ T VKWFN KGFGF+ DG D F+H S +Q + L E + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 G 61 G Sbjct: 61 G 61 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 54.7 bits (130), Expect = 8e-07, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 EGEKGAEAANVTG 156 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 NGPKGPAAVHVV 68 G KG A +V Sbjct: 147 EGEKGAEAANVT 158 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGP 59 K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + G Sbjct: 210 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 269 Query: 60 KGPAAVHVVA 69 KG A +V Sbjct: 270 KGAEAANVTG 279 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 54.7 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H SAI N+ +++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 NGPKGPAAVHVVAL 70 G KG A +V L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFIT DG +++FVHF +I + L + Q V F N KGP A + Sbjct: 83 GEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQAEN 141 Query: 67 VVAL 70 V L Sbjct: 142 VEPL 145 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 32/48 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 TG+VK+FN +KGFGF+ DG +DVFVH SA++ L E Q + F Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSF 184 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP- 62 K +G VK+FN KGFGFI DG D FVH SA++ +L E + F +E +G Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AAVHVVAL 70 AAV++ L Sbjct: 294 AAVNLAQL 301 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 G KWF+ +KGFGFIT +DG+ D+FVH + I++ F+ L E + VEF ++ G G Sbjct: 90 GHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDG 143 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G V WFN +KGFGFIT DG DVFVH++ I + F++L + V + + + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AVHV 67 AV V Sbjct: 61 AVDV 64 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN EKG+GFI P DG+ D+F+H + ++ + VE+ + GP G Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 66 HVVAL 70 VAL Sbjct: 62 ERVAL 66 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 54.3 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G VKWFN + G+GFI D +D+FVH +AI N+ +++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 73 VGEKGREAANVTG 85 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 5/59 (8%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDG----SKDVFVHFSAIQSND-FKTLTENQEVEFGIE 56 +K+ G VKWF+ KG+GF+ P ++++FVH ++IQS ++TL EN E+EF +E Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVE 60 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KGFGFI +D ++FVHF AI+ + L + Q V F + KG A + Sbjct: 115 GTVKWFNVKKGFGFIV-RDSGDEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQADN 173 Query: 67 VVAL 70 V L Sbjct: 174 VSIL 177 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAI---QSNDFKTLTENQEVEFGIENGPKGPA 63 G VKW+N +KG+GFI D +DVFVH SAI Q K+L E+++V F + G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AVHVVA 69 A++V Sbjct: 65 AMNVTG 70 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN KGFGF++ DG++D+FVH ++ + L +E+ GPKG A+ V Sbjct: 136 VKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEVR 195 Query: 69 AL 70 L Sbjct: 196 PL 197 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ + E V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AVHVVAL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK+FN KG+GFI D ++D+FVH + + T+ E V+F + +G KG AV Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNG---ITIREKDRVQFEVVDGKKGLNAV 59 Query: 66 HV 67 V Sbjct: 60 KV 61 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNPEKGFGFIT-PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VK F+ +KG+GFIT P +G ++FVH+S I+ + L ++EV I G KGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AVHVVAL 70 A HV L Sbjct: 60 AAHVRVL 66 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKGP 62 + TG V F+ +KGFGFI P G KD+FVH SAI+S+ ++TL E+ VEF I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKY 72 Query: 63 AAVHVVA 69 AV V A Sbjct: 73 QAVDVTA 79 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 +G+ KWFN GFGFI+ P D + DVFVH S + F++L E + +EF + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 PKGPAAVHV 67 KG AV V Sbjct: 65 SKGLEAVRV 73 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/39 (56%), Positives = 28/39 (71%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT 44 TG VKWFN +KGFGFI P DG D FVH SA++ + ++ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRS 41 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+VK+FN KGFGFIT + KD FVH S + + E EVEF ++ G KG AV+ Sbjct: 4 GIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAVN 59 Query: 67 VVAL 70 V L Sbjct: 60 VRVL 63 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI---QSNDF-KTLTENQEVEFGI 55 S ++TG VKWFN + GFGFIT D +D+FVH S I N F K++ + + VEFG+ Sbjct: 30 RSKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEFGL 88 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP- 62 + +G VK+FN KGFGFI DG D FVH SA++ L E ++F +E +G Sbjct: 84 RASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKY 143 Query: 63 AAVHV 67 AAV++ Sbjct: 144 AAVNL 148 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 3/72 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTE---NQEVEFGIEN 57 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ + + E EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETEFDVVE 114 Query: 58 GPKGPAAVHVVA 69 G KG A +V Sbjct: 115 GGKGAEAANVTG 126 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 7 GLVKWFNPEKGFGFITPKDGSK-DVFVHFSAIQSNDFKTLTENQEVEF 53 G V WF+ KGFGFI P +G + VFV FS+I+ + ++TL E Q V F Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF 64 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGP 59 ++ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + G Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 60 KGPAAVHVVA 69 KG A +V Sbjct: 153 KGAEATNVTG 162 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 39/66 (59%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K+ G+VKWF+ KGFGF+T DG D+ +H + +++ ++ E V I+ P+G Sbjct: 9 RKIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGM 68 Query: 63 AAVHVV 68 AV V+ Sbjct: 69 QAVEVL 74 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 31/61 (50%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWF+ KGFGF DVF+H ++ + F L + + + +G +G A ++ Sbjct: 108 VKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQIL 167 Query: 69 A 69 + Sbjct: 168 S 168 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-----FKTLTENQEVEFGI 55 ++ + G VKW++ + +GFI+ DG KD+FVH +AI + +TL +++EV F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ENGPKGPAAVHVVA 69 G GP A +V Sbjct: 122 VEGKNGPEAANVTG 135 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VK+FN KGFGFI K+ K+ FVH S + + EN EV F +E G KG AV Sbjct: 3 NGTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVD----EIRENDEVTFELEKGKKGLNAV 58 Query: 66 HV 67 +V Sbjct: 59 NV 60 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 7 GLVKWFNPEKGFGFITPKDGSK---DVFVHFSAIQSNDFKTLTENQEVEFG-IENGPKGP 62 G +KW+NP+KG+GFITP+ ++ DVF+H SA+ S LTE Q V + ++N G Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGK 64 Query: 63 AAVHVVAL 70 + + L Sbjct: 65 YSAENLKL 72 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VK+FN KGFGFI D ++D+FVH S + + E+ V+F +E G KG AV+ Sbjct: 4 GKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAVN 59 Query: 67 V 67 V Sbjct: 60 V 60 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/32 (75%), Positives = 25/32 (78%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI 37 TG VKWFN EKGFGFI+ DG DVFVHFS I Sbjct: 3 TGTVKWFNSEKGFGFISQDDGGPDVFVHFSPI 34 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 52.0 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGI 55 G V F+ KGFGFI P DG +D+FVH SAI+S+ +++L E+ VEF + Sbjct: 16 GKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTV 65 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+V WFN KGFGFI + G +D++VH+S + + FKTL ++V F + + P A Sbjct: 3 LKGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 VHV 67 V Sbjct: 62 TAV 64 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPKGP 62 G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + KG Sbjct: 5 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGS 64 Query: 63 AAVHVVA 69 A +V Sbjct: 65 EAANVTG 71 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFNP KGFGFI D +++FVHF A+Q+ ++L +V F +G Sbjct: 10 QQRGEVKWFNPNKGFGFILT-DSGEELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 64 AVHV 67 A +V Sbjct: 69 ADNV 72 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 15/79 (18%) Query: 6 TGLVKWFNPEKGFGFITPKDGS--------------KDVFVHFSAIQSNDFKTLTENQEV 51 TG VKWF+ EKG+GFI KDGS KDVFVH +++Q + L E Q V Sbjct: 13 TGHVKWFSVEKGYGFIC-KDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRV 71 Query: 52 EFGIENGPKGPAAVHVVAL 70 + ++ +AV++ L Sbjct: 72 RYQLDESNGKVSAVNLEVL 90 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 4/56 (7%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI----QSNDFKTLTENQEVEFGI 55 ++TG VKWFN + GFGFIT D +D+FVH S+I + +++ E + VEFG+ Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGV 106 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 G +KWFN KGFGFI DG+ +VFVH+ ++ +++ + Q V + + +GP A Sbjct: 76 GNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQA 132 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 6/61 (9%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTE------NQEVEFGIENGPKGP 62 V WFN +G+G++ P DGS+DVFVH S +Q + F+++ E E+EF +++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDERRR 103 Query: 63 A 63 A Sbjct: 104 A 104 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 G VKWF+ EKGFGFI + G ++V VH++ I+ F+ L E EVE+ Sbjct: 4 GRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEY 49 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN---DFKTLTENQEVEFGIEN 57 M M G VKWFN KG+GFI D +K+ FVH+ +I +N + K L +++ V F + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIIT-DDNKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GPKGPAAVHVVAL 70 KG A++++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (60%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+VK F+ EKG+GFI P DGS +FVH + + +TL + Q++ F IE G +++ Sbjct: 4 GIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRSSIS 63 Query: 67 VVAL 70 + L Sbjct: 64 KLRL 67 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +++ +G+VKWFN G+GF+ D +DVF+H +AI N+ +++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 NGPKG-PAAVHVVA 69 G KG P A +V Sbjct: 82 EGEKGLPEAANVTG 95 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TGLVKWF+P KGFGF+ +G D+ +H + +++ ++ + +E +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 HVVAL 70 V A+ Sbjct: 72 QVHAI 76 Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWF+ KGFGF S D+F+H ++ + L + + + G +G A V Sbjct: 108 VKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEVH 167 Query: 69 A 69 A Sbjct: 168 A 168 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +V+WF+ + G+G I D ++VF+ F+AI ++T+ + V F + GP GP A +V Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITP-KDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S K++G +KWF+ KG+GFI P + G D+ +H ++++ + F+T E + + +G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAVHVVAL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWF+P KG+GFI +G K+ FVH S I F+ L + V + ++ KG A+ Sbjct: 15 GTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAID 73 Query: 67 VVA 69 V++ Sbjct: 74 VIS 76 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSK--DVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++TG++KWF+ KG+GF+TP D K D+ +H S +Q + F+T E +V ++ +G Sbjct: 13 EITGIIKWFDSSKGYGFVTP-DFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRG 71 Query: 62 PAAVHVVAL 70 + V ++ Sbjct: 72 LKCIQVKSI 80 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 +VKWFN +KGFGF++ G++D+F+H ++ L Q V G KG Sbjct: 108 AIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKG 162 >UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C46 Length = 99 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF---GIEN 57 MS G++ WF+ E+GFGF+ P DG +DVF+ S I + E Q V + G + Sbjct: 30 MSTVSYGVINWFDDERGFGFVHPADGDRDVFIDSSEIVDWPAGGVHEGQHVSYQTGGTRH 89 Query: 58 GPKGPAAVHVV 68 P+ AVH++ Sbjct: 90 WPRA-QAVHIL 99 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G +KWFN KGFGFIT DG+ +VFVHF ++ + + Q V + + +GP A Sbjct: 61 GSIKWFNATKGFGFITGDDGN-EVFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAED 119 Query: 67 VVAL 70 V L Sbjct: 120 VSPL 123 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG V WF+PEK +GFIT G+ +FVH A+ + + L E +EV F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAVHVV 68 G A V+ Sbjct: 59 GDEANDVL 66 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNPEKGFGFIT-PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + +K ++P KG+G+IT P+DG DV+ H AI+ + + Q VE I G +GP Sbjct: 2 IQATIKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 64 AVHVVAL 70 A HV + Sbjct: 60 AAHVTII 66 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS-NDFKTLTENQEVEFGIENGPKGPAAV 65 G +K+F+ +GFGFI P DGS+DVF+H + I + L E Q +E+ E KG +A+ Sbjct: 4 GKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSAL 63 Query: 66 HVV 68 + Sbjct: 64 NAA 66 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Query: 13 NPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 N EKGFGF P G VFVHFS I FKTL E Q +E+ + G KG Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKG 70 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KG+GFIT + G +DV +H S ++ + T E V KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAVHVVAL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q + G KG A + Sbjct: 109 VKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWF+ +GFGFI DV VHFS ++ + +TL E + + +G Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAVHVVAL 70 A ++A+ Sbjct: 91 LQARRILAI 99 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP AV + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 V 68 + Sbjct: 196 I 196 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 12 FNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL 70 F+ +GFGFI P+DG DVFVH + I D L + + EF + G +GP A+++ A+ Sbjct: 11 FDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRGPKAINLSAV 68 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGS----KDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 ++TG VKWF+ KG+GFI P D + KDV +H ++++S+ + E + + P Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 29/61 (47%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN KG+GF+ D+FVH ++ + + L + V GPKG + Sbjct: 138 VKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEIE 197 Query: 69 A 69 A Sbjct: 198 A 198 >UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF18_9PLAN Length = 65 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG +K EKGFGFI DG +D+F H S++ F L E Q VEF E +G AV Sbjct: 3 TGTIKKI-TEKGFGFI--NDGQQDIFFHLSSLDGVTFDQLVEGQTVEFETEKSDRGLRAV 59 Query: 66 HVVA 69 V Sbjct: 60 RVTT 63 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 NGPKGPAAVHVV 68 KG A +V Sbjct: 86 EAAKGSEAANVT 97 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPK 60 + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + K Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 61 GPAAVHVV 68 G A +V Sbjct: 81 GSEAANVT 88 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 48.5 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 39/67 (58%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G++KWF+ KG+GF+ P +G DV +H + ++ + ++T E + KG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AVHVVAL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G KG A + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEI 223 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G+V F+ ++GFGFI S+DVFVH I+ ++L+ Q+VEF E KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 VHVV 68 ++V+ Sbjct: 59 INVI 62 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 32/61 (52%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G V+ F+ EKG+G+I P G ++ VHFSAI L Q V F I +GP A Sbjct: 4 GTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAER 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_C6XI23 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XI23_HIRBI Length = 69 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VK++N E+GFG IT D KDV FSA++ + E Q+V+F E P + Sbjct: 4 GTVKYYNSEQGFGLITRADNEKDVRFTFSALKKLGITGIKERQKVKFETETNPDTGKVIA 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=Labrenzia RepID=A0NS44_9RHOB Length = 66 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 + G VKWF+ +G G I P+DG +D+ V SA++ + TLTE Q V F +E Sbjct: 2 LHGNVKWFDNRRGIGTIEPQDG-EDILVDISALRRSGIDTLTEGQLVAFDLE 52 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 48.1 bits (113), Expect = 8e-05, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 TG KWFN GFGFI+ P D DVFVH S + F++L E + VEF + Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 90 Query: 59 PKGPAAVHVVA 69 KG ++ V Sbjct: 91 SKGLESIRVTG 101 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++ G +K +N E+GFGFI P G +D+FVH A S + T Q V F +E GP G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRP-TVGQAVTFEVELGPNG 58 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G V+W++ +KG+GFI DG KDVF+ +A+ K+L + VEF + G KGP A+ Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAM 60 >UniRef50_UPI000169964E Cold-shock DNA-binding protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169964E Length = 61 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 11/64 (17%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+ KG+GFI ++G KD+FVHF AI E +E+GPKG + + Sbjct: 1 TGTVKWFDSGKGYGFI-EREGGKDLFVHFRAIVG----------EGHVSLEDGPKGSSLL 49 Query: 66 HVVA 69 +A Sbjct: 50 KSMA 53 >UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BT01_THAPS Length = 50 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 2/52 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 +TG VKW+N E+GFGFI DG D++VH + + + L EN+ V F E Sbjct: 1 VTGTVKWYNAERGFGFIAIDDGGADMYVHATGLTFD--GPLIENERVGFTTE 50 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI ++G ++FVH +I ++L + V + + KGP A Sbjct: 126 GTVKWFNGTKGFGFIIRENGD-EIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAEE 184 Query: 67 VVAL 70 V AL Sbjct: 185 VEAL 188 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG V F+ +G+GFI P DGS DVFVH + + + + LT VE+ +GP A Sbjct: 8 LTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPKA 66 Query: 65 VHV 67 V V Sbjct: 67 VLV 69 >UniRef50_Q1PZB4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZB4_9BACT Length = 176 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Query: 14 PEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 PE+G+GFIT DG ++++ H +++ ++DF L + EV F E G KGP A Sbjct: 121 PEEGYGFITSADG-REIYFHKNSVLNHDFARLEKGMEVRFSEELGEKGPQA 170 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 28/48 (58%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 TG +KWF+ KG+GFIT DG DVF+H S + + TL + + Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRY 50 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGIENGPKGP 62 KM G VK+F+ +KGFGFI + G D F H+S I S+ +KT+ VEF +++ +G Sbjct: 2 KMEGKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGD 59 Query: 63 AAVHV 67 A +V Sbjct: 60 TAFNV 64 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT----LTENQEVEFGIE 56 +S ++ G V WF +KG+GFI+ +D +DVFVH +AI + T + + + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 NGPKGPAAVHVVA 69 G G A +V Sbjct: 124 QGEWGTEAANVTG 136 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF S+DVFVH ++ + F L + V + +GP+G A V Sbjct: 117 VKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+VKWF+ KGFGF+ +G D+ +H + ++S ++ E V + +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 65 VHVVAL 70 V ++A+ Sbjct: 82 VEIIAI 87 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 34/66 (51%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG + WF+ G+GFI P DG D+ V A+ + ++L + Q V + + G A Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 65 VHVVAL 70 ++ + Sbjct: 62 AGMIRM 67 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKD----GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 +++G VKWF+ KG+GFI P D G KDV +H +++++ +T E + + P Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 77 KGWQVSEVVDL 87 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 28/61 (45%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN KG+GF+ D+FVH ++ + L +V GPKG + Sbjct: 138 VKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEIT 197 Query: 69 A 69 + Sbjct: 198 S 198 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G VKW++P +G+GFI DG D+ +H S ++ N ++ G KG Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQ 74 Query: 64 AVHVVAL 70 AV +V + Sbjct: 75 AVELVEM 81 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWF+ +G+GF+T + DVF+H + ++ F+ + +E GPKG A + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFG-IENGP 59 + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF IE Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAK 89 Query: 60 KGPAAVHVV 68 KG A +V Sbjct: 90 KGSEAANVT 98 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 31/50 (62%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEF 53 + G++ W++ EKG+GFI P G DVFVH S+++SN L +E+ Sbjct: 109 RARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEY 158 >UniRef50_A0PKE1 DNA-binding protein n=2 Tax=Mycobacterium RepID=A0PKE1_MYCUA Length = 135 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQ--EVEFGIENGPKG 61 + TG + F+ +G+GFI P G +DVF+H + + DF L + V F IE+GP+G Sbjct: 2 RGTGRIVRFDDVRGYGFIAPDSGGEDVFLHANDL---DFDRLLAKRGTRVSFDIEDGPRG 58 Query: 62 PAAVHVV 68 A V+ Sbjct: 59 KFATAVL 65 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 G+ KWFN GFGF++ D DVFVH S + F++L E + VEF + Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKS 100 Query: 59 PKGPAAVHVV 68 KG ++ V Sbjct: 101 AKGLESIRVT 110 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S+ + G VK + E+GFGFI KD K+ + H S + K + E +V F I+ K Sbjct: 366 VSDIIKGKVKKYVSERGFGFI--KDREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTK 423 Query: 61 GPAA--VHVVA 69 GP A + VVA Sbjct: 424 GPVAKQIKVVA 434 >UniRef50_B5XEM2 Nuclease-sensitive element-binding protein 1 n=1 Tax=Salmo salar RepID=B5XEM2_SALSA Length = 194 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK 43 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ K Sbjct: 35 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPK 77 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 121 8e-27 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 116 3e-25 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 115 3e-25 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 115 4e-25 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 113 2e-24 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 113 2e-24 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 113 2e-24 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 113 2e-24 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 111 8e-24 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 111 9e-24 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 110 1e-23 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 110 2e-23 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 110 2e-23 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 109 2e-23 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 109 3e-23 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 108 4e-23 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 108 7e-23 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 108 7e-23 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 107 9e-23 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 107 9e-23 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 107 2e-22 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 105 3e-22 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 105 3e-22 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 105 4e-22 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 105 6e-22 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 104 8e-22 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 104 9e-22 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 104 1e-21 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 104 1e-21 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 104 1e-21 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 104 1e-21 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 103 2e-21 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 103 2e-21 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 103 2e-21 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 103 2e-21 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 102 3e-21 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 102 3e-21 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 102 3e-21 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 102 3e-21 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 102 3e-21 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 102 4e-21 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 102 4e-21 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 102 4e-21 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 102 4e-21 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 102 4e-21 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 102 4e-21 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 102 5e-21 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 102 6e-21 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 101 6e-21 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 101 8e-21 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 101 8e-21 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 101 8e-21 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 101 1e-20 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 100 1e-20 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 100 1e-20 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 100 1e-20 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 100 2e-20 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 100 2e-20 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 100 2e-20 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 100 2e-20 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 100 2e-20 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 100 2e-20 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 100 2e-20 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 100 2e-20 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 100 3e-20 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 100 3e-20 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 99 3e-20 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 99 3e-20 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 99 3e-20 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 99 3e-20 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 99 4e-20 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 99 4e-20 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 99 4e-20 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 99 4e-20 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 99 4e-20 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 99 5e-20 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 99 6e-20 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 98 6e-20 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 98 7e-20 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 98 7e-20 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 98 7e-20 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 98 8e-20 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 98 8e-20 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 98 8e-20 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 98 8e-20 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 98 9e-20 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 98 9e-20 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 98 9e-20 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 98 9e-20 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 98 9e-20 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 98 9e-20 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 98 1e-19 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 97 1e-19 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 97 1e-19 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 97 1e-19 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 97 1e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 97 2e-19 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 97 2e-19 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 97 2e-19 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 97 2e-19 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 97 2e-19 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 97 2e-19 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 97 2e-19 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 96 3e-19 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 96 3e-19 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 96 4e-19 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 95 4e-19 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 95 4e-19 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 95 4e-19 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 95 4e-19 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 95 5e-19 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 95 6e-19 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 95 6e-19 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 95 7e-19 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 94 1e-18 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 94 1e-18 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 94 1e-18 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 94 1e-18 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 94 1e-18 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 94 2e-18 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 94 2e-18 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 94 2e-18 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 94 2e-18 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 93 2e-18 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 93 3e-18 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 93 3e-18 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 93 3e-18 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 93 3e-18 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 93 3e-18 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 93 3e-18 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 92 4e-18 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 92 5e-18 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 92 6e-18 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 92 6e-18 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 92 6e-18 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 92 8e-18 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 91 9e-18 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 91 1e-17 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 91 1e-17 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 90 1e-17 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 90 1e-17 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 90 2e-17 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 90 2e-17 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 90 2e-17 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 90 2e-17 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 90 2e-17 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 89 4e-17 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 89 4e-17 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 89 5e-17 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 89 5e-17 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 89 6e-17 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 89 6e-17 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 88 7e-17 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 88 8e-17 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 88 9e-17 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 87 1e-16 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 87 1e-16 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 87 1e-16 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 87 2e-16 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 87 2e-16 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 87 2e-16 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 87 2e-16 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 86 2e-16 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 86 3e-16 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 86 4e-16 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 86 4e-16 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 86 4e-16 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 85 4e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 85 5e-16 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 85 5e-16 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 85 6e-16 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 85 7e-16 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 85 7e-16 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 85 7e-16 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 85 8e-16 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 85 8e-16 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 85 9e-16 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 84 1e-15 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 84 1e-15 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 84 1e-15 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 84 1e-15 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 84 2e-15 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 83 2e-15 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 83 3e-15 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 82 4e-15 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 82 4e-15 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 82 4e-15 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 82 6e-15 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 82 6e-15 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 82 6e-15 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 82 6e-15 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 82 7e-15 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 81 8e-15 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 81 9e-15 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 81 1e-14 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 81 1e-14 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 80 1e-14 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 80 1e-14 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 80 3e-14 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 79 3e-14 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 79 4e-14 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 79 5e-14 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 79 6e-14 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 79 6e-14 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 78 7e-14 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 78 8e-14 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 78 8e-14 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 78 9e-14 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 78 1e-13 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 77 1e-13 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 77 1e-13 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 77 1e-13 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 77 1e-13 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 77 2e-13 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 76 3e-13 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 76 3e-13 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 76 4e-13 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 75 4e-13 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 75 5e-13 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 75 5e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 75 6e-13 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 75 7e-13 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 75 8e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 75 9e-13 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 75 9e-13 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 74 1e-12 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 74 1e-12 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 74 1e-12 UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zy... 74 1e-12 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 74 1e-12 UniRef50_B5XEM2 Nuclease-sensitive element-binding protein 1 n=1... 74 2e-12 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 74 2e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 73 3e-12 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 73 3e-12 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 73 4e-12 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 72 4e-12 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 72 4e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 72 6e-12 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 72 7e-12 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 72 8e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 71 1e-11 Sequences not found previously or not previously below threshold: UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 82 4e-15 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 77 2e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 75 4e-13 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 75 6e-13 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 75 7e-13 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 75 8e-13 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 73 3e-12 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 72 6e-12 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 71 1e-11 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 59/70 (84%), Positives = 65/70 (92%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ K+TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN+F+TL ENQEVEF E GPK Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 55/70 (78%), Positives = 60/70 (85%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWF+ KGFGFI+P DGSKDVFVHFSAIQ ND+KTL E Q VEF IE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KGFGFITP DG +D+FVH S+++S+ +++L + VEF + +G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAVHVVA 69 AV+V A Sbjct: 63 RTKAVNVTA 71 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 49/68 (72%), Positives = 60/68 (88%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ+++++TL E Q+V F IE+G K Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAVHVV 68 GPAA +V+ Sbjct: 61 GPAAANVI 68 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 +++TG VKWFN +KGFGFITP DG D+FVH S+I+S F++L E + VEF +E+ G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 -AAVHVVA 69 AV V Sbjct: 62 TKAVDVTG 69 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 49/68 (72%), Positives = 56/68 (82%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 +K+ G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N FKTL E Q VEF I NG KGP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAVHVVAL 70 +A +V+AL Sbjct: 62 SAANVIAL 69 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 41/69 (59%), Positives = 47/69 (68%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ TG VKWFN EKGFGFITP+ G D+FVHF AI+S+ FK+L E Q V F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAVHVVA 69 G A V Sbjct: 82 GMQAAQVRP 90 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 43/65 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP +G DVF HFS I + F++L ENQ V F I GPKG A Sbjct: 46 TGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQAS 105 Query: 66 HVVAL 70 ++ + Sbjct: 106 NIQPI 110 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 43/64 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +G +D+F H+SAI + +KTL Q+V F I G KG A+ Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 HVVA 69 ++VA Sbjct: 104 NIVA 107 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 43/64 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFIT G +DVF H +AI + F+TL E Q+V+F + GPKG A Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQ 95 Query: 66 HVVA 69 +V A Sbjct: 96 NVRA 99 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 40/68 (58%), Positives = 48/68 (70%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG VKWF+ +KG+GFIT DG DVFVHFSAI+ N FK+L + +VEF I NGPKG Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAVHVVA 69 P A VV Sbjct: 81 PQAAKVVK 88 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 49/67 (73%), Positives = 54/67 (80%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHFSAIQ N FKTL E Q VEF I++G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AVHVVAL 70 AV+V A+ Sbjct: 63 AVNVTAI 69 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 66 HVVAL 70 +V L Sbjct: 86 VIVPL 90 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 41/64 (64%), Positives = 46/64 (71%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKG+GFI P+D S DVFVHFSAIQ N FK L EN VEF ++GPKG A + Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VVAL 70 V L Sbjct: 64 VTKL 67 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 47/65 (72%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VKWFN KGFGFI P G D+F HFS I+++ FK+L ENQ V+F ++NGPKG A Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 66 HVVAL 70 ++ L Sbjct: 80 NITPL 84 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 40/64 (62%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+ KWFN +KGFGF+TP DG KDVFVH I+ + F++L EN+ VEF KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 HVVA 69 V Sbjct: 132 LVTG 135 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWFN KGFGFI+ G DVFVHF AI+ + L E Q VEF I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAVHVVAL 70 A VV + Sbjct: 231 LQAEDVVPV 239 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 38/62 (61%), Positives = 48/62 (77%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VKWFN EKG+GFITP DGSKD+F H+S I S +K+L ENQ V F + GPKGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 HV 67 ++ Sbjct: 63 NI 64 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + TG VKWF+ +KGFGFI P DG +D+FVH ++I+S+ F+TL+E + VEF +++G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAVHVVAL 70 AV V A+ Sbjct: 64 RTKAVEVTAV 73 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG VKWFN KG+GFI +G DVFVH+ AI+ + ++L E Q+VEF + G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQRGNG-ADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 42/62 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP G +D+F HFSAI FKTL E Q+V F + GPKG A Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 66 HV 67 ++ Sbjct: 63 NI 64 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 HVVAL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENG 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 PKGPAAVHVVA 69 KG A +V Sbjct: 269 EKGAEAANVTG 279 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK----TLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ + ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 EGEKGAEAANVTG 156 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 43/65 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI DG DVF H +AIQ++ F+TL E Q+VEF GPKG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 HVVAL 70 +V + Sbjct: 63 NVRVV 67 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK++G VKWFN ++G+GFI D +DVFVH +AIQ+N+ +++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 NGPKGPAAVHVVA 69 +GPKG A +V Sbjct: 85 SGPKGLEAANVTG 97 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN + G+GFI D D+FVH +A+ N+ ++L + ++VEF + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 NGPKGPAAVHVVA 69 G KGP A +V Sbjct: 114 EGQKGPEAANVTG 126 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 147 EGEKGAEAANVTG 159 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G VKWFN + G+GFI D +D+FVH +AI N+ +++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 73 VGEKGREAANVTG 85 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 43/66 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN KGFGFI P+ G +DVF HFSAI + F+TL + V F + +GPKG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 VHVVAL 70 ++ L Sbjct: 62 QNIAPL 67 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN EKGFGFI +DG DVFVHFSAIQ + +K+L E Q+VEF I +G +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 VHVVAL 70 +VV L Sbjct: 60 ANVVKL 65 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKG+GFIT +DGS DVFVHFSAIQ + +KTL E Q V F +E+ +GP AV Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 66 HV 67 +V Sbjct: 62 NV 63 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 40/61 (65%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G KWFN KG+GF+TP DG ++VFVH S IQ + F++L E +EVEF + +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 40/63 (63%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFI G DVF HFS I ++ ++ L E Q V F + G KGP AV+ Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VVA 69 +V Sbjct: 64 IVP 66 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 41/68 (60%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++ ++G VKWFN KG+GFI G +D+F H+SAIQ ++TL Q V F I GPKG Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAVHVVA 69 A + Sbjct: 65 LHATDIRP 72 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 150 EGEKGAEATNVTG 162 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI P+DG +D+F H+S IQ +++L QEV F ++ GPKG A + Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 67 V 67 + Sbjct: 64 I 64 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 45/69 (65%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN KGFGFI P DGS+++FVH + I F+++ E +EVE+ +++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAVHVVA 69 P AV+V Sbjct: 61 APKAVNVTG 69 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H SAI N+ +++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 NGPKGPAAVHVVAL 70 G KG A +V L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 81 EGEKGAEAANVTG 93 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++G+VKWFN EKGFGFI + G DVFVHF AI +TL E Q+V F + G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 VHV 67 +V Sbjct: 92 ENV 94 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 116 EGEKGAEAANVTG 128 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKG+GFIT +DG KDVFVH+S+I S FKTL E Q V + + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 HVVAL 70 +V + Sbjct: 82 NVTVV 86 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++++++G VKWFN + G+GFI D +DVFVH +AI N+ +++ + ++VEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 89 EGEKGNEAANVTG 101 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +M G VKWFN +KG+GFI+ + KDVFVH+S + FK+L E +VEF + G KGP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AVHVVAL 70 A +V L Sbjct: 78 ATNVTKL 84 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN---DFKTLTENQEVEFGIEN 57 ++ K+TG VKWFN + G+GFI D +DVFVH SAI +N +++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GPKGPAAVHVVA 69 G KG A +V Sbjct: 119 GEKGNEAANVTG 130 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+TG+VKWFN + G+GFI D +DVFVH SAI N+ +++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 IGEKGNEAANVTG 156 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 NGPKGPAAVHVVA 69 KG A +V Sbjct: 86 EAAKGSEAANVTG 98 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + G VKWF+ +KGFGFITP DG +D+FVH S I+S F++L E + VEF +E+G G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAVHVVA 69 AV V Sbjct: 67 TKAVDVTG 74 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KGFGFI +G DVFVH+SAIQS+ FKTL E Q V F ++ G KGPAAV+ Sbjct: 28 GKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVN 86 Query: 67 VVAL 70 V + Sbjct: 87 VKPI 90 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI +G+ DVFVHFSAI+ +K L E V F + G KGPAA + Sbjct: 70 GTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAADN 128 Query: 67 VVAL 70 V L Sbjct: 129 VELL 132 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP G D+F HFS +Q N FK+L E Q+V + G KGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 HVVAL 70 + + Sbjct: 122 KIEPI 126 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+P KG+GFI +DG DVFVHFSAI+ N FKTL E Q VEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 VHVVAL 70 VV L Sbjct: 60 ADVVKL 65 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 +K+ G VKWF+ +KGFGF+ P DGS +VFVH SAI +N F++L + + VEF + P G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAVHVVA 69 A++V Sbjct: 100 WKALNVTG 107 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENG 58 + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 1 TAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEA 60 Query: 59 PKGPAAVHVVA 69 KG A +V Sbjct: 61 AKGSEAANVTG 71 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 NGPKGPAAVHVVA 69 KG A +V Sbjct: 77 EAAKGSEAANVTG 89 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS +M G+VKWFN KGFGFITP+ G D+FVHF AIQ FK+L E Q+V F G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAVHVVAL 70 G A V A+ Sbjct: 60 GMQADQVQAV 69 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGF++ + S DVFVH+ AI + +TL E Q+V F + G KG A Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 66 HVVAL 70 +V L Sbjct: 66 NVTPL 70 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVVA 69 G KG A V Sbjct: 82 EGDKGDEASEVTG 94 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN +KGFGFIT ++GS DVFVHFSAIQ + FK+L E Q V F +E +GP AV Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 66 HVVA 69 +V Sbjct: 62 NVTK 65 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVVA 69 G KG A V Sbjct: 82 EGDKGDEASEVTG 94 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V+F + GPKG A Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 66 HVVAL 70 +V + Sbjct: 63 VIVPV 67 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG VKWFN KGFGFI P G+KDVFVH SA++ + L +NQ+V F IE G G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAVHVVAL 70 A +AL Sbjct: 111 REAAVNLAL 119 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KG+GFIT +DG+ DVFVHFSAIQ++ FKTL E Q+V F E+ +GP A + Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VVA 69 VV Sbjct: 63 VVP 65 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFI + G DVFVHFSAI +K+L E Q VEF + G +GP A Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 66 HVVAL 70 +VV L Sbjct: 62 NVVKL 66 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GLQADQV 66 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG VKWFN EKGFGFI DG+ DVFVHFSAI + FK+L E QEV F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 KNVVKL 67 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 43/65 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFITP D DVFVH+S IQ+ FKTL EN V+F I G KGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 66 HVVAL 70 V + Sbjct: 63 GVTLV 67 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFI ++G DVFVHFSAIQ + FK+L E Q V F +E G +GP A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 66 HV 67 +V Sbjct: 62 NV 63 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 114 EGGKGAEAANVTG 126 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+PEKG+GFI + G DVFVHFSAIQ FKTL E Q+VEF I G +GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 VHVVA 69 +V+ Sbjct: 60 ANVIK 64 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + G+VKWFN KGFGFI G +D+FVHF AIQ + +++L + ++VEF + G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 60 GLQAEEVRRV 69 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 + ++ +G KWFN KG+GFI P++G D+FVH +AI++ F++L E ++VEF +E Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GP-AAVHVVA 69 G A +V Sbjct: 80 GRKKARNVTG 89 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + TG+V+WF+ +KGFGFITP +G +D+FVH S+I+S+ F++L E + VEF I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAVHVVA 69 AV V Sbjct: 64 TKAVDVTG 71 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGFI G DVFVH+SAI + F++L ENQ V F + +G GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 66 HVVA 69 +V Sbjct: 62 NVSP 65 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGFI + G DVFVHFSAIQ + FKTL E QEV F I G +GP A Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 66 HVVA 69 +V Sbjct: 62 NVTK 65 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKD-GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN KGFGFI + +D+FVHFSAI+ + +KTL Q+V F + +GPKG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AVHV 67 A+ + Sbjct: 62 AIKI 65 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 32/61 (52%), Positives = 40/61 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFNP KG+GFI P G KDVFVH SA+Q ++L E Q+++F IE G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 V 65 Sbjct: 93 A 93 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN--DFKTLTENQEVEFGIENG 58 M+ + G VKWFN EKG+GFI ++G KDVFVHF + +L+E Q+V F + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 PKGPAAVHVVAL 70 KGP A +V L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +S K+TG+VKWFN + G+GFI D +D+FVH SAI N+ +++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 84 EGEKGHEAANVTG 96 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 N-GPKGPAAVHVVA 69 KG A +V Sbjct: 86 EAAKKGSEAANVTG 99 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + TG V WFN KG+GFITP DGS ++FVH S+I S +++LT VEF I G G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAVHVVA 69 AV+V A Sbjct: 68 KTKAVNVTA 76 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 41/64 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 +G+VKWFN EKGFGFI G DVF H+S I + F+ L E Q+V F I G KGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 HVVA 69 ++V Sbjct: 63 NIVP 66 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK+TG VKWFN + G+GFI D +DVFVH SAI N+ +++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 80 IGEKGHEAANVTG 92 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 33/55 (60%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KGFGFI P G DVFVH SA+Q TL E Q+V + I + Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ G VKWFN EKG+GFI K G KDVFVH SAI KTL E Q+V + G K Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQK-GGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +M+G VKW++P KGFGF++ KDG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAVHVVA 69 A + Sbjct: 233 REAQSITV 240 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 33/63 (52%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP ++ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 VAL 70 ++ Sbjct: 125 TSV 127 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K G+VKWFN KG+GFI +DVFVHFSAIQ + +KTL E + VEF + GPKG Sbjct: 21 KENGVVKWFNGAKGYGFIQRS-TGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AVHVVA 69 A +VV Sbjct: 80 AANVVR 85 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG-PA 63 ++G+ KWF+ KGFGFITP DGS+D+FVH I+ F++L +++ VE+ IE KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AVHVVA 69 AV+V Sbjct: 71 AVNVSG 76 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + +G VKWFN EKGFGFITP+ G D+FVHF AIQ N FK+L E Q+V F G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++PEKG+GFI DG D+FVH SAI + L E VEF + + PKGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPRAE 59 Query: 66 HVVA 69 HV Sbjct: 60 HVRV 63 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFNPEKG+GFI+ ++G DVFVHFSAI +KTL E Q VEF + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 VHVVAL 70 V+V + Sbjct: 60 VNVRKV 65 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 38/64 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFNP KG+GF+ P DG KDVFVH SA++ + +L E +V + + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVAL 70 + L Sbjct: 116 NLRL 119 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ G VKWFN KGFGFITP+ G+ D+FVHF +IQ FK+L E Q+V F + NG K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GLQADEV 66 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI + G DVF HFSAI S+ FKTL E Q V+F + G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 HVVAL 70 ++V + Sbjct: 64 NIVCI 68 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KGFGFI G + +FVHF AI+ + L + Q V F + KG A + Sbjct: 115 GTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQADN 173 Query: 67 VVAL 70 V L Sbjct: 174 VSIL 177 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSK---DVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 G KWFN ++G+GFITP S+ DVFVH S+I F++L E V+F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AVHVVA 69 AV VV Sbjct: 89 AVKVVG 94 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+ +KG+GFIT +G DVFVH+SAI+ FKTL E Q VEF I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 VHVVAL 70 HV + Sbjct: 60 AHVKVV 65 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN EKG+GFI +DG+ DVFVH+SAI+ + FKTL E Q+VEF + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 VHVVAL 70 V + Sbjct: 61 SKVRKV 66 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + G VKWF+ +KG+GFIT +D + DVFVHF+ IQ FKTL + Q+VEF + K Sbjct: 1 MSFR--GTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTK 58 Query: 61 GPAAVHVVAL 70 GP A +V L Sbjct: 59 GPRAKNVRVL 68 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI ++G + +FVH +I ++L + V + + KGP A Sbjct: 126 GTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAEE 184 Query: 67 VVAL 70 V AL Sbjct: 185 VEAL 188 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G VK F+ GFGFITP D +D+F+H S+++ +D+++L ++ +E + +G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAVHVVAL 70 G AV V AL Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIEN 57 + K+ G VKWFN + G+GFI D ++D+FVH +AI +N+ ++L +N+EV F I Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GPKGPAAVHVVA 69 G KG A V Sbjct: 78 GSKGLEAASVTG 89 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 42/68 (61%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +MTG VKW++P KGFGF++ DG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAVHVVA 69 A + Sbjct: 272 REASSITV 279 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 30/60 (50%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI--QSNDFKTLTENQEVEFGIENGPKGP 62 +TG VKWF+ EKG+GF+T D DVFVHFSAI FKTL + Q VEF ++ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAVHVVAL 70 A +V L Sbjct: 63 RAKNVRVL 70 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGP 59 M+ + G+VKWF+ +KG+GFI +G D+FVH+S I S FKTL Q VEF + GP Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 KGPAAVHVVAL 70 KG A +VV L Sbjct: 60 KGLHARNVVPL 70 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VK+FN +KGFGFI +DG DVFVHFS IQ++ FKTL E Q V + ++ +G A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 65 VHVVAL 70 ++VVA+ Sbjct: 85 INVVAI 90 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI ++G +DVFVH S I ++ FK+L E +V F IE G KGPAA + Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVAL 70 V + Sbjct: 63 VTVV 66 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN EKG+GFIT + G +D+FVH+SAI ++ +KTL E QEV F + GP+G A Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 HVVAL 70 +V + Sbjct: 62 NVRGI 66 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 ++ G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L + VEF +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAVHVVA 69 P A+ V Sbjct: 73 PKAIEVSG 80 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 36/63 (57%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V+WFN E+GFGF+ P DGS D+FVH S I + + L E Q V F + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 HVV 68 V Sbjct: 115 DVR 117 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +S ++ G V WF +KG+GFI+ +D +DVFVH +AI + ++ + + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 NGPKGPAAVHVVA 69 G G A +V Sbjct: 124 QGEWGTEAANVTG 136 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 94.7 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G+VK F+ GF FITP DGS+D+F+H S+++ + +++L ++ +E + + Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAVHVVA 69 G AV V A Sbjct: 62 GRTKAVDVTA 71 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 41/70 (58%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++TG+VKWF+ KG+GFI P++G DV VH S ++ + L E V PK Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAVHVVAL 70 G A+ VV + Sbjct: 94 GAQAIRVVDV 103 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN +G+GF+T +G+ D+F+H ++ + L Q++ GPKG + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 68 VA 69 Sbjct: 197 AP 198 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +DG +DVFVH+S I ++ ++ LTE + VE+ ++ GPKG A Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 HV 67 V Sbjct: 62 QV 63 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 38/63 (60%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KG+GFI S D+F HFS++Q + +KTL Q V F + KG A++ Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VVA 69 +V Sbjct: 64 IVP 66 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGPA 63 TG VK+FN KGFGFITP +G KDVFVH SA++++ ++L + Q+V F +E KGP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AVHVVA 69 AV++ A Sbjct: 64 AVNLSA 69 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA-- 63 TG VKWFNPEKGFGFI P DG D FVH SA++ L E Q+V + + + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 64 AVHVVAL 70 A ++ + Sbjct: 110 ASNLTLV 116 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDG-SKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 + K+ G+ +WFN +KGFGF+ D S+D+F H + I+ F++L E +EVEF + G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAVHVVAL 70 KGP A+ +V Sbjct: 69 KGPQAIEIVRF 79 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS-NDFKTLTENQEVEFGIENGPKGPAA 64 T VKWF+ +KG+GFI D +DVFVH+S IQS +DFKTL +Q V F + +GPKG A Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHA 62 Query: 65 VHVVAL 70 + V L Sbjct: 63 LEVAPL 68 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGIENGPKGPAA 64 G VKWFN KGFGFI+ +D DVFVH++AI+ N ++ L ENQEVEF I GPKG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 65 VHVVAL 70 +V L Sbjct: 62 CNVKKL 67 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G KWF+ K +GF+TP DGS DVFVH I+ +++L N+EVE+ + KG A Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREATT 124 Query: 67 VVAL 70 V + Sbjct: 125 VTGV 128 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-----FKTLTENQEVEFGI 55 ++ + G VKW++ + +GFI+ DG KD+FVH +AI + +TL +++EV F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ENGPKGPAAVHVVA 69 G GP A +V Sbjct: 122 VEGKNGPEAANVTG 135 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 93.2 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK-TLTENQEVEFGIENGP 59 M+ + G VKWFN +KG+GFI P DGSKDVFVH + + + L E +EV + +E P Sbjct: 1 MAQR--GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTP 58 Query: 60 KGPAAVHVVAL 70 KG +A++V L Sbjct: 59 KGLSAMNVERL 69 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 93.2 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN KGFGFIT DG +++FVHF +I + L + Q V F N KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AVHVVAL 70 A +V L Sbjct: 139 AENVEPL 145 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENG 58 +TG VKWFN ++G+GF+ D +D+F+H SAI ++ K++ E +E+ F I G Sbjct: 27 TGITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKG 86 Query: 59 PKGPAAVHVVAL 70 KG A +V A+ Sbjct: 87 AKGNEAANVSAI 98 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN EKGFGFI G DVFVHF+AIQSN K L E Q+V+F +E GPKG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 ANVVKL 67 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 3/65 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGPAA 64 G VKWFN EKG+GFI + GS+DVF HFSAIQ+ FK L E EVEF IE G KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 VHVVA 69 ++V Sbjct: 63 RNIVV 67 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 8/71 (11%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVH--------FSAIQSNDFKTLTENQEVEFGIENG 58 G KWFN KG+GFITP +G DVFVH S + + F++L + V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 PKGPAAVHVVA 69 P+G A VV+ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 92.0 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KGFGFI P DGS DVFVH SA++ + L + Q++ + + K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN +KGFGFI ++G +D+FVHF A+ L E Q+VE+ I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AVHVVAL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 40/66 (60%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKW+NPEKGFGFI + G KDVFVH + + + L+E Q V + GPKG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAVHV 67 P A + Sbjct: 228 PEARGI 233 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + VKWFNPEKGFGF+ DGS DVF+H A+++ +++ ++ + G KG Sbjct: 66 IEATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQV 125 Query: 65 VHVVAL 70 V+ + Sbjct: 126 TEVLEV 131 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG + VFVH SA+ + +L Q VEFG+ G +G A+ Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 HVVAL 70 V L Sbjct: 65 SVRTL 69 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Query: 4 KMTGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 + TG KWFN GFGFI+ P D DVFVH S + F++L E + VEF + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 NGPKGPAAVHVVA 69 KG ++ V Sbjct: 89 KSSKGLESIRVTG 101 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 91.6 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +++ +G+VKWFN G+GF+ D +DVF+H +AI N+ +++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 NGPKG-PAAVHVVA 69 G KG P A +V Sbjct: 82 EGEKGLPEAANVTG 95 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 +G+ KWFN GFGFI+ P D + DVFVH S + F++L E + +EF + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 PKGPAAVHVVA 69 KG AV V Sbjct: 65 SKGLEAVRVSG 75 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 44/65 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P DG KDVFVH SA++ K L++NQ++ + +++G G ++ Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 66 HVVAL 70 + L Sbjct: 78 GDLRL 82 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G VKWFN KGFGFI P DG+ DVFVH SA++ ++L E Q+V + I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 41/64 (64%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+VKWFN KGFGFI+ + D+F H+S I+ + +++L Q+V+F + + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVAL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ +AI + K+L E Q+VEF Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAVHVVAL 70 GP+A V+A Sbjct: 60 GPSAADVIAF 69 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 38/64 (59%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KG+GFI + +D+F+H+S+I + +KTL Q V F G +G AV Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 66 HVVA 69 ++ Sbjct: 63 DIMP 66 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+ ++GFGFI P +G +++F H I +KTL Q V + +E+G G AV Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 HVVA 69 +++ Sbjct: 64 NIIP 67 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGP 59 MS K VKWF+ +KG+GFI DG +D+FVHFSAI S FK L ++ EVEF I+ Sbjct: 1 MSRKS--KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQ 58 Query: 60 KGPAAVHVVAL 70 KG A +V + Sbjct: 59 KGMQAKNVCEI 69 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN +KGFGFI+ +DG KD F+HFS I FKT+ E +EVEF IE+G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 VHVVA 69 +VV+ Sbjct: 60 TNVVS 64 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG + VF+H SA+ TL Q VEFGI G KG A+ Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 HVVAL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 34/55 (61%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G VKWFN KGFGFI P DG +DVFVH SA+ L E +VE+ +E + Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 37/55 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G+VKWFNP KGFGFI P+ G +D+FVH SA++ L E Q V+F +E + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 TG KWFN GFGFI+ P D DVFVH S + F++L E + VEF + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 PKGPAAVHVVA 69 KG ++ V Sbjct: 117 SKGLESIRVTG 127 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS---NDFKTLTENQEVEFGIENGPKGPA 63 G VKW+N +KG+GFI D +DVFVH SAI K+L E+++V F + G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AVHVVA 69 A++V Sbjct: 65 AMNVTG 70 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWF+ +GFGFI DV VHFS ++ + +TL E + + +G Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAVHVVAL 70 A ++A+ Sbjct: 91 LQARRILAI 99 Score = 65.4 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP AV + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 V 68 + Sbjct: 196 I 196 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKGPA 63 TG VK+FN EKGFGFI P DG D+FVH SA+Q++ L +NQ+V + E KGP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 64 AVHVV 68 AV++ Sbjct: 76 AVNIT 80 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G+ KWFN +KG+GFIT ++G +DVFVH S I ++ F++L EN++VE + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAVHVVA 69 A+HV Sbjct: 61 KAIHVTG 67 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKD-GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S K++G +KWF+ KG+GFI P G D+ +H ++++ + F+T E + + +G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAVHVVAL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KG+GFIT + G +DV +H S ++ + T E V KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAVHVVAL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q + G KG A + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 VA 69 Sbjct: 168 EP 169 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 36/64 (56%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G V WF+ EKGFGFITP D S VFV F AI++ ++TL V + E GP AV Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 HVVA 69 V Sbjct: 113 AVRP 116 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 35/55 (63%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KG+GFI P +G KDVFVH SA++ + L E Q++ + + + Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKR 57 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP-- 59 + + G KWFN KG+GF+ +D+FVH S + F++L E + V + I+ Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 KGPAAVHVVA 69 KG A V Sbjct: 110 KGREAYAVSG 119 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKG 61 + +G VK+F +KGFGFITP +G DVFVH SA++ + TL Q + F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAVHVV 68 P AV + Sbjct: 181 PKAVELR 187 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G +KWFN KGFGFIT DG++ VFVHF ++ + + Q V + + +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 HVVAL 70 V L Sbjct: 119 DVSPL 123 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP- 62 K G+V WFN KGFGF+T DG DVFVH S I + F++L + + VEF +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAVHVVA 69 AV V Sbjct: 103 KAVKVTG 109 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFITPK-------DGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 +G+ KWFN GFGF++ D DVFVH S + F++L E + VEF + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 PKGPAAVHVVA 69 KG ++ V Sbjct: 95 SKGLESLQVTG 105 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M++K+ G VKWFN KG GFI D DVFVH+ +I S KTL + Q V F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GRQASEV 66 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 86.2 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQS--NDFKTLTENQEVEFGIENGPKGPA 63 G V+WF+ E+GFGF+ DG+ D+FVH S I + ++L E Q VEF I G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 64 AVHV 67 A V Sbjct: 63 ARRV 66 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 V W++ KGFGF+TP G D FVH ++ L E V F + G +GP A V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 VAL 70 + Sbjct: 223 RVV 225 Score = 75.8 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 G V W+ P KG+GF+TP G ++F H SAI + E Q V F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+V ++ E+GFGFITP G D+FVH S ++ + L E V F + +GP A Sbjct: 256 GVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQADR 313 Query: 67 V 67 V Sbjct: 314 V 314 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+P +G+GF+ P +G DVF+H S + D L E +EF IE KG AV Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDED---LEEGDRLEFEIEETEKGLNAV 59 Query: 66 HVVAL 70 ++ AL Sbjct: 60 NIEAL 64 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Query: 1 MSNKMT-GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 M +++ G KWF+ +KGFGFIT +DG+ D+FVH + I++ F+ L E + VEF ++ G Sbjct: 83 MEDQIQRGHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGH 141 Query: 60 KG-PAAVHVVA 69 G AV V Sbjct: 142 DGKRKAVSVTG 152 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE--NGPKGPA 63 TG+VK+FN +KGFGFI P +G D+FVH SA+Q++ L+ENQ+V F E KGP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AVHV 67 AV++ Sbjct: 64 AVNL 67 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK + E+G+G+ITP G +DVFVHF+ I FK L + ++V + + G K P A Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 HVVAL 70 V + Sbjct: 63 QVQPI 67 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT------LTENQEVEFGI 55 S + G VKWFN KGFG+ITP DG DVFVH SA++ F+ T+ VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EN---GPKGPAAVHVVAL 70 E+ + AV V + Sbjct: 68 EHESPTDERLKAVCVTGI 85 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K +G VK+FN KGFGFI DG D FVH SA++ +L E + F +E +G Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAV 65 A Sbjct: 293 YAA 295 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK+FN +KGFGF+ DG +DVFVH SA++ L E Q + F + + +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 HV 67 ++ Sbjct: 197 NL 198 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + +G VK+FN KGFGFI DG D FVH SA++ L E ++F +E +G Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAV 65 A Sbjct: 143 YAA 145 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G +KWFN KGFGFI DG++ VFVH+ ++ +++ + Q V + + +GP A Sbjct: 76 GNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAEG 134 Query: 67 VVAL 70 V A+ Sbjct: 135 VKAV 138 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 7 GLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 G+ KWFN GFGF++ D DVFVH S + F++L E + VEF + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 KGPAAVHVVA 69 KG ++ V Sbjct: 102 KGLESIRVTG 111 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 84.7 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G+VK+F+ EKGFGF+ G KDVFVH A++ + KTL Q V G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAVHVVAL 70 P A V + Sbjct: 192 PQADTVAII 200 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 35/63 (55%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++ VKWFN KGFGF+ P DGS D F+H SA++ + E + + G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 VHV 67 V V Sbjct: 109 VMV 111 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 84.7 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 36/62 (58%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G VKWF +KGFGF+T DG KDVFVH S ++ ++L + V + PKG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AV 65 A Sbjct: 192 AT 193 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 36/66 (54%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + VKWFN KGFGF+ P DG+ D F+H S + L E EV I GPKGP Sbjct: 43 VRATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQV 102 Query: 65 VHVVAL 70 + +V + Sbjct: 103 IRLVDV 108 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN KGFGFI D+FVH SA+ + EN +V F IE+G KG AV Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAV 193 Query: 66 HVVAL 70 ++ L Sbjct: 194 NIKLL 198 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 35/64 (54%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKW++P+KGFGFI P G KD FVH +A+ + L E Q V G KG + Sbjct: 136 GTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVLS 195 Query: 67 VVAL 70 + + Sbjct: 196 IRLV 199 Score = 52.3 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++ + V WFN KGFGF+ DG++ ++ ++++ + + E ++ IE P+G Sbjct: 40 ADAVNAEVMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRG 98 Query: 62 PAAVHVVAL 70 V + Sbjct: 99 HQVTKVREI 107 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 34/53 (64%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +VKWFN KGFGFI P +G D+FVH SA++ + L E Q+V + +E + Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 G+VKWFNP KGFGFI P+DG +DVFVH +A++ + L E +V + +E + Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 39/67 (58%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G++KWF+ KG+GF+ P +G DV +H + ++ + ++T E + KG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AVHVVAL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G KG A + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEI 223 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFNP K FGFI ++G KDVFVH SA+ + L E Q+V F +E+ Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAVHVV 68 +AV++ Sbjct: 61 KISAVNLR 68 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPKG 61 G VK+F +KGFGFI P DG +DVFVH++ I+ + FK L E VE+ + KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 62 PAAVHVVAL 70 A VV L Sbjct: 63 TQAKDVVKL 71 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG V WF+PEK +GFIT G+ +FVH A+ + + L E +EV F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAVHVVA 69 G A V+ Sbjct: 59 GDEANDVLV 67 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 83.5 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGIENGPK-G 61 + G V F+ KGFGFI P DG +D+FVH SAI+S+ +++L E+ VEF + Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAVHVVA 69 AV V A Sbjct: 73 YQAVDVTA 80 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKG 61 + TG V F+ +KGFGFI P G KD+FVH SAI+S+ ++TL E+ VEF I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAVHVVA 69 AV V A Sbjct: 72 YQAVDVTA 79 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KGFGF++ DG++D+FVH ++ + L +E+ GPKG A+ V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 VAL 70 L Sbjct: 195 RPL 197 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ + E V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AVHVVAL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 3/69 (4%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN--DFKTLTENQEVEFGIENGPKG 61 K G +WF+ +KG+GFI DG KD+FVH+S+IQ+ KTL EN +VEF ++ G +G Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 62 PAAVHVVAL 70 AV VV + Sbjct: 64 AQAVDVVVV 72 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query: 5 MTGLVKWFNPEKGFGFITPKDG-SKDVFVHFSAIQSND-----FKTLTENQEVEFGIENG 58 + G VKW++ +GFI D DVFVH +AI + +TL + +EV F I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 PKGPAAVHVVA 69 +GP A +V Sbjct: 66 KQGPEAANVTG 76 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + G VKWF+PEKG+GF+ G +D+FVH S ++ + +L + EVE+ + +G Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERG 188 Query: 62 PAAVHVVAL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ K G VKWF+ G+GFI+P+DG D++VH +AI + K+L Q+VEF Sbjct: 1 MTLK-KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFH 59 Query: 61 GPAAVHVVAL 70 GP+A V+A Sbjct: 60 GPSAEDVIAF 69 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGS----KDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 ++TG VKWF+ KG+GFI P D + KDV +H ++++S+ + E + + P Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KG+GF+ D+FVH ++ + + L + V GPKG + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 Query: 68 VA 69 A Sbjct: 197 EA 198 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ +KGFGF++ ++G +DV+V SA+ + L Q VEFGI +G +GP A+ Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 HVVAL 70 + L Sbjct: 111 SLKLL 115 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + G VKWF+P KG+GFI +G K+ FVH S I F+ L + V + ++ KG Sbjct: 10 ATVEHGTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKG 68 Query: 62 PAAVHVVA 69 A+ V++ Sbjct: 69 DKAIDVIS 76 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 81.6 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 24/43 (55%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTL 45 + G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G V WFN +KGFGFIT DG DVFVH++ I + F++L + V + + + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AVHV 67 AV V Sbjct: 61 AVDV 64 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P +G DVFVH + ++ + TL E +V++ + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 HVVAL 70 ++ L Sbjct: 69 NIQLL 73 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 81.2 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWFNP KGFGFI G +++FVHF A+Q+ ++L +V F +G Sbjct: 8 NGQQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRG 66 Query: 62 PAAVHV 67 A +V Sbjct: 67 EQADNV 72 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 81.2 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG VKW++ EKGFGF++ +DG +DV+V SA+ + L Q VEFG+ G +GP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQA 72 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G+V F+ ++GFGFI S+DVFVH I+ ++L+ Q+VEF E KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 VHVVA 69 ++V+ Sbjct: 59 INVIP 63 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI----QSNDFKTLTENQEVEFGIEN 57 + ++TG VKWFN + GFGFIT D +D+FVH S+I + +++ E + VEFG+ Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVIA 108 Query: 58 GP 59 Sbjct: 109 TK 110 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP-AAV 65 G VK+FN +KG+GFI +DGS D FVH +A+Q+ TL + Q V + +E G G +A+ Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 66 HV 67 ++ Sbjct: 86 NL 87 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLT---ENQEVEFGIEN 57 M M G VKWFN KG+GFI D K+ FVH+ +I +N + L +++ V F + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDDN-KEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GPKGPAAVHVVAL 70 KG A++++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 79.3 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 40/67 (59%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G+VKWF+ KGFGF+T DG D+ +H + +++ ++ E V I+ P+G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 64 AVHVVAL 70 AV V+ + Sbjct: 70 AVEVLEI 76 Score = 65.8 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF DVF+H ++ + F L + + + +G +G A + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 Query: 68 VA 69 ++ Sbjct: 167 LS 168 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ KM G VKW++P G G I+P DG D++V+ + I S K L E Q VEF G + Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAVHVVA 69 A V+A Sbjct: 60 SQMAEDVIA 68 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 78.5 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK F+ GFGFI FV ++AI+ +K+L Q V + + G KG + Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 66 HV 67 +V Sbjct: 63 NV 64 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TGLVKWF+P KGFGF+ +G D+ +H + +++ ++ + +E +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 HVVAL 70 V A+ Sbjct: 72 QVHAI 76 Score = 67.8 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF S D+F+H ++ + L + + + G +G A V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 VA 69 A Sbjct: 167 HA 168 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 11/72 (15%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF----KTLTENQEVEFGIEN 57 S ++TG VKWFN + GFGFIT D +D+FVH S I + K++ + + VEF Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GPKGPAAVHVVA 69 G A V Sbjct: 87 ---GLIASKVTG 95 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G++ W++ EKG+GFI P G DVFVH S+++SN L +E+ G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAVHVVA 69 A++V A Sbjct: 167 KLQAINVTA 175 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG + WF+ G+GFI P DG D+ V A+ + ++L + Q V + + G A Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 65 VHVVAL 70 ++ + Sbjct: 62 AGMIRM 67 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ T VKWFN KGFGF+ DG D F+H S +Q + L E + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAVHV 67 G + Sbjct: 61 GMQVSEI 67 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G+VK+F+ +KGFGF+ P G KDV+V +Q L + Q V I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSK-DVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S G V WF+ KGFGFI P +G + VFV FS+I+ + ++TL E Q V F Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF--VRSAG 69 Query: 61 GPAAVHVVAL 70 AV V L Sbjct: 70 RAEAVAVRPL 79 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF-KTLTENQEVEFGIENGPKGPAA 64 TG VKW++ E+G+GF++ DG +DVF+H S I+ F K + E + + F I KGPAA Sbjct: 5 TGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPAA 63 Query: 65 VHV 67 ++V Sbjct: 64 INV 66 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQ-SNDFKTLTENQEVEFGIENGPKGPAA 64 G +K+F+ +GFGFI P DGS+DVF+H + I + L E Q +E+ E KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 65 VH 66 ++ Sbjct: 63 LN 64 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 7/74 (9%) Query: 3 NKMTGLVKWFNPEKGFGFITPKD----GSKDVFVHFSAIQSND-FKTLTENQEVEFGIE- 56 +K+ G VKWF+ KG+GF+ P ++++FVH ++IQS ++TL EN E+EF +E Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 Query: 57 NGPKGP-AAVHVVA 69 G A++V A Sbjct: 62 EAESGKFKAINVTA 75 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKD----GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 +++G VKWF+ KG+GFI P D G KDV +H +++++ +T E + + P Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 77 KGWQVSEVVDL 87 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KG+GF+ D+FVH ++ + L +V GPKG + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 VA 69 + Sbjct: 197 TS 198 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF S+DVFVH ++ + F L + V + +GP+G A V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 68 V 68 Sbjct: 176 R 176 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 37/66 (56%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+VKWF+ KGFGF+ +G D+ +H + ++S ++ E V + +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 65 VHVVAL 70 V ++A+ Sbjct: 82 VEIIAI 87 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 32/61 (52%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G V+ F+ EKG+G+I P G ++ VHFSAI L Q V F I +GP A Sbjct: 4 GTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAER 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G + F+ +G+GFI P +G +DVF+H + + + + L +VEF +E G +G A Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VV 68 V Sbjct: 68 VR 69 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPK-DGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++TG++KWF+ KG+GF+TP D+ +H S +Q + F+T E +V ++ +G Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 63 AAVHVVAL 70 + V ++ Sbjct: 73 KCIQVKSI 80 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN +KGFGF++ G++D+F+H ++ L Q V G KG + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA-- 64 G V+W++ +KG+GFI DG KDVF+ +A+ K+L + VEF + G KGP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 65 VHVVA 69 ++V+A Sbjct: 62 LNVIA 66 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG V F+ +G+GFI P DGS DVFVH + + + + LT VE+ +GP A Sbjct: 8 LTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPKA 66 Query: 65 VHVVA 69 V V Sbjct: 67 VLVRV 71 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V F+ KG+GFI P G +DVF+H S + + L VEF G +G A+ Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 66 HVVAL 70 V L Sbjct: 63 TVNLL 67 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 7/67 (10%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTE------NQEVEFGIENGPKGP 62 V WFN +G+G++ P DGS+DVFVH S +Q + F+++ E E+EF +++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 63 AAVHVVA 69 A +V Sbjct: 103 RAKNVTG 109 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +V+WF+ + G+G I D ++VF+ F+AI ++T+ + V F + GP GP A +V Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNPEKGFGFIT-PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VK F+ +KG+GFIT P +G ++FVH+S I+ + L ++EV I G KGP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AVHVVAL 70 A HV L Sbjct: 60 AAHVRVL 66 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VK+FN KGFGFI D ++D+FVH S + + E+ V+F +E G KG AV+ Sbjct: 4 GKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLNAVN 59 Query: 67 VVAL 70 V + Sbjct: 60 VEVI 63 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+V F+ KG+GFI P +G +DVFVH + + TLT V F + +G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 66 HV 67 V Sbjct: 62 DV 63 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G + F+ +GFGFI P+DG DVFVH + I D L + + EF + G +GP A++ Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRGPKAIN 64 Query: 67 VVAL 70 + A+ Sbjct: 65 LSAV 68 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPK---DGSKDVFVHFSAIQSND-----FKTLTENQEVE 52 + + G VKWF+ +GF+ D ++D FVH +AI + +TL +++ V Sbjct: 85 IETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVV 144 Query: 53 FGIENGPKGPAAVHVVA 69 F I G KGP A +V Sbjct: 145 FDIVEGLKGPEAANVTG 161 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K++G VK + +KGFGFI G DVFVHFSAIQ+ + LT QEV+ + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAVHVVAL 70 A V L Sbjct: 61 QAAAVEVL 68 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG V F+ +G+GFI P G DVFVH + + + + L VE+ +GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 65 VHVVAL 70 + V L Sbjct: 61 LTVRVL 66 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN EKG+GFI P DG+ D+F+H + ++ + VE+ + GP G Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 66 HVVAL 70 VAL Sbjct: 62 ERVAL 66 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G VKW++P +G+GFI DG D+ +H S ++ N ++ G KG Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQ 74 Query: 64 AVHVVAL 70 AV +V + Sbjct: 75 AVELVEM 81 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWF+ +G+GF+T + DVF+H + ++ F+ + +E GPKG A + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+V WFN KGFGFI + +D++VH+S + + FKTL ++V F + + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 VHVVAL 70 V + Sbjct: 62 TAVRII 67 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ +++G +K +N +KGFGFI P +G +D+FVH S + + F + Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQD 66 Query: 61 GP-AAVHV 67 G A++V Sbjct: 67 GKNKAINV 74 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 39/46 (84%), Positives = 41/46 (89%) Query: 15 EKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +KGFGFITP DGSKDVFVHFSAIQSNDFKTL E Q+VEF IENG K Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zymomonas mobilis RepID=C8WB38_ZYMMN Length = 189 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG VKWF+ KGFGF+ G D+ +HFS +Q + L E V+ +G A Sbjct: 28 ITGYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKA 87 Query: 65 VHVVAL 70 ++A Sbjct: 88 HKILAF 93 Score = 63.5 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 VKWFN KG+GF+ +D+FVH A + K + + + KG +A Sbjct: 123 TVKWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLSA 179 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK+FN KG+GFI D ++D+FVH + + T+ E V+F + +G KG AV Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLNAV 59 Query: 66 HVVAL 70 V + Sbjct: 60 KVKKI 64 >UniRef50_B5XEM2 Nuclease-sensitive element-binding protein 1 n=1 Tax=Salmo salar RepID=B5XEM2_SALSA Length = 194 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQ 49 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + Sbjct: 35 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPKKYLRSVGDGE 87 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 7 GLVKWFNPEKGFGFITPK---DGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 G +KW+NP+KG+GFITP+ + DVF+H SA+ S LTE Q V + Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQND 60 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 73.1 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+VK+FN KGFGFIT + KD FVH S + + E EVEF ++ G KG AV Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 HVVAL 70 +V L Sbjct: 59 NVRVL 63 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 +G ++WF+ +KG+GFI DG KDVF+ +A+ + + +VE+ + G +G A+ Sbjct: 21 SGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALPQ-GVRNPRKGAKVEYSVIEGNRGQVAM 78 Query: 66 HVV 68 V Sbjct: 79 GVT 81 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 13 NPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 N EKGFGF P G VFVHFS I FKTL E Q +E+ + G KG A + Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAEN 75 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 13/78 (16%) Query: 6 TGLVKWFNPEKGFGFITPKD-------------GSKDVFVHFSAIQSNDFKTLTENQEVE 52 TG VKWF+ EKG+GFI G KDVFVH +++Q + L E Q V Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVR 72 Query: 53 FGIENGPKGPAAVHVVAL 70 + ++ +AV++ L Sbjct: 73 YQLDESNGKVSAVNLEVL 90 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG +KWF+ KG+GFIT DG DVF+H S + + TL + + + +A Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAH 62 Query: 66 HVVAL 70 + + Sbjct: 63 DLSLM 67 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNPEKGFGFIT-PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + +K ++P KG+G+IT P+DG DV+ H AI+ + + Q VE I G +GP Sbjct: 2 IQATIKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 64 AVHVVAL 70 A HV + Sbjct: 60 AAHVTII 66 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++G V ++ +GFGF+ P+ G DVF+H + I ++ +L +V F +E +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 VHV 67 V+V Sbjct: 66 VNV 68 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG-PAAV 65 G +K +N EKG+GFITP +G DVF+H A + + Q + +G +G KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRLRAC 62 Query: 66 HV 67 +V Sbjct: 63 NV 64 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 29/46 (63%), Positives = 32/46 (69%) Query: 15 EKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 EKGFGFIT +G DVFVHF AI S FKTL E Q+V F +E G K Sbjct: 1 EKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G +K +N E+GFGFI P G +D+FVH A S + T Q V F +E GP G Sbjct: 2 RLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRP-TVGQAVTFEVELGPNGKK 60 Query: 64 AVH 66 Sbjct: 61 RAR 63 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VK F+ +GFI FV + +I+ +K L Q V + + G KG + Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 66 HV 67 +V Sbjct: 63 NV 64 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G++ +N +GFGFI P G VFVH A Q + Q V F +E GP G Sbjct: 2 QFDGVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPRP-QAGQRVRFAVEAGPGGRK 60 Query: 64 -AVHVVAL 70 A V +L Sbjct: 61 RACRVESL 68 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 109 3e-23 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 107 1e-22 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 106 2e-22 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 106 2e-22 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 106 2e-22 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 105 6e-22 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 102 4e-21 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 102 5e-21 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 102 5e-21 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 101 7e-21 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 101 8e-21 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 101 9e-21 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 101 9e-21 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 100 1e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 100 2e-20 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 100 2e-20 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 99 3e-20 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 99 4e-20 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 99 4e-20 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 99 4e-20 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 99 5e-20 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 99 5e-20 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 98 9e-20 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 97 1e-19 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 97 2e-19 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 97 2e-19 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 97 2e-19 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 97 2e-19 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 96 2e-19 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 96 3e-19 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 96 4e-19 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 96 4e-19 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 96 5e-19 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 96 5e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 95 7e-19 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 95 8e-19 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 95 8e-19 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 94 9e-19 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 94 1e-18 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 94 1e-18 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 94 1e-18 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 94 1e-18 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 94 1e-18 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 94 1e-18 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 94 1e-18 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 94 2e-18 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 94 2e-18 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 93 3e-18 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 93 3e-18 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 93 3e-18 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 93 3e-18 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 93 3e-18 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 93 3e-18 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 93 3e-18 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 93 3e-18 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 92 3e-18 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 92 4e-18 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 92 4e-18 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 92 4e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 92 5e-18 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 92 5e-18 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 92 5e-18 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 92 6e-18 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 92 6e-18 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 92 6e-18 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 92 6e-18 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 92 7e-18 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 92 7e-18 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 92 7e-18 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 92 7e-18 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 91 8e-18 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 91 9e-18 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 91 9e-18 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 91 9e-18 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 91 9e-18 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 91 1e-17 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 91 1e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 91 1e-17 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 91 1e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 91 1e-17 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 91 1e-17 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 91 1e-17 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 91 1e-17 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 91 1e-17 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 91 2e-17 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 91 2e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 91 2e-17 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 90 2e-17 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 90 2e-17 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 90 2e-17 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 90 3e-17 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 90 3e-17 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 89 3e-17 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 89 3e-17 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 89 4e-17 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 89 4e-17 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 89 4e-17 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 89 4e-17 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 89 4e-17 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 89 4e-17 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 89 4e-17 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 89 5e-17 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 89 5e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 89 5e-17 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 89 5e-17 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 89 6e-17 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 89 6e-17 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 88 7e-17 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 88 7e-17 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 88 7e-17 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 88 8e-17 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 88 8e-17 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 88 8e-17 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 88 9e-17 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 87 1e-16 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 87 1e-16 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 87 1e-16 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 87 2e-16 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 87 2e-16 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 87 2e-16 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 86 3e-16 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 86 4e-16 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 86 4e-16 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 86 5e-16 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 86 5e-16 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 85 5e-16 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 85 6e-16 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 85 6e-16 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 85 7e-16 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 85 8e-16 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 85 8e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 85 9e-16 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 84 1e-15 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 84 1e-15 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 84 1e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 84 1e-15 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 84 1e-15 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 84 1e-15 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 84 2e-15 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 84 2e-15 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 84 2e-15 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 84 2e-15 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 84 2e-15 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 84 2e-15 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 84 2e-15 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 83 2e-15 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 83 2e-15 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 83 2e-15 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 83 3e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 83 3e-15 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 83 3e-15 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 83 3e-15 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 82 3e-15 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 82 4e-15 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 82 4e-15 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 82 5e-15 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 82 5e-15 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 82 7e-15 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 82 8e-15 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 81 9e-15 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 81 9e-15 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 81 1e-14 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 81 1e-14 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 81 1e-14 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 80 1e-14 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 80 2e-14 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 80 2e-14 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 80 2e-14 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 80 2e-14 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 80 2e-14 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 80 3e-14 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 80 3e-14 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 80 3e-14 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 80 3e-14 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 80 3e-14 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 79 4e-14 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 79 5e-14 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 79 5e-14 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 79 5e-14 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 79 6e-14 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 79 6e-14 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 79 6e-14 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 78 7e-14 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 78 9e-14 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 78 1e-13 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 77 2e-13 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 77 2e-13 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 77 2e-13 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 77 2e-13 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 77 2e-13 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 77 2e-13 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 77 2e-13 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 77 2e-13 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 77 2e-13 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 77 2e-13 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 77 2e-13 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 76 3e-13 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 76 3e-13 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 75 4e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 75 5e-13 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 75 5e-13 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 75 5e-13 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 75 6e-13 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 75 7e-13 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 75 7e-13 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 75 7e-13 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 75 7e-13 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 75 8e-13 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 75 9e-13 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 74 1e-12 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 74 1e-12 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 74 1e-12 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 74 1e-12 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 74 1e-12 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 74 1e-12 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 74 2e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 74 2e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 74 2e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 74 2e-12 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 74 2e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 73 2e-12 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 73 2e-12 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 73 3e-12 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 73 3e-12 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 73 3e-12 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 73 3e-12 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 72 5e-12 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 72 5e-12 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 72 5e-12 UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n... 72 6e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 72 6e-12 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 72 6e-12 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 72 7e-12 UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Ch... 72 7e-12 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 72 8e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 72 8e-12 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 71 8e-12 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 71 9e-12 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 71 9e-12 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 71 9e-12 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 71 1e-11 UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewane... 71 1e-11 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 71 1e-11 UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacteriu... 71 1e-11 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 71 1e-11 UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Ps... 71 1e-11 UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 71 1e-11 UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriav... 71 1e-11 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 70 2e-11 UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alterom... 70 2e-11 Sequences not found previously or not previously below threshold: >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 59/70 (84%), Positives = 65/70 (92%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ K+TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN+F+TL ENQEVEF E GPK Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 41/69 (59%), Positives = 47/69 (68%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ TG VKWFN EKGFGFITP+ G D+FVHF AI+S+ FK+L E Q V F E G K Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAVHVVA 69 G A V Sbjct: 82 GMQAAQVRP 90 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 44/69 (63%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG VKWFN KGFGFITP +G DVF HFS I + F++L ENQ V F I GPKG Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAVHVVAL 70 A ++ + Sbjct: 102 KQASNIQPI 110 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KGFGFITP DG +D+FVH S+++S+ +++L + VEF + +G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAVHVVA 69 AV+V A Sbjct: 63 RTKAVNVTA 71 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP- 62 ++TG VKWFN +KGFGFITP DG D+FVH S+I+S F++L E + VEF +E+ G Sbjct: 3 RVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRT 62 Query: 63 AAVHVVA 69 AV V Sbjct: 63 KAVDVTG 69 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 55/70 (78%), Positives = 60/70 (85%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWF+ KGFGFI+P DGSKDVFVHFSAIQ ND+KTL E Q VEF IE G K Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAVHVVAL 70 GP+AV+VVAL Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 49/67 (73%), Positives = 55/67 (82%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G VKWFN KGFGFITP+DGSKDVFVHFSAIQ+N FKTL E Q VEF I NG KGP+ Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPS 62 Query: 64 AVHVVAL 70 A +V+AL Sbjct: 63 AANVIAL 69 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 47/66 (71%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG+VKWFN KGFGFI P G D+F HFS I+++ FK+L ENQ V+F ++NGPKG A Sbjct: 19 QTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQA 78 Query: 65 VHVVAL 70 ++ L Sbjct: 79 ANITPL 84 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 49/69 (71%), Positives = 60/69 (86%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSNKMTGLVKWFN +KGFGFI+P DGSKDVFVHFSAIQ+++++TL E Q+V F IE+G K Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAVHVVA 69 GPAA +V+ Sbjct: 61 GPAAANVII 69 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 43/64 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +G +D+F H+SAI + +KTL Q+V F I G KG A+ Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 HVVA 69 ++VA Sbjct: 104 NIVA 107 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 43/64 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFIT G +DVF H +AI + F+TL E Q+V+F + GPKG A Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQAQ 95 Query: 66 HVVA 69 +V A Sbjct: 96 NVRA 99 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 40/67 (59%), Positives = 48/67 (71%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG VKWF+ +KG+GFIT DG DVFVHFSAI+ N FK+L + +VEF I NGPKG Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAVHVV 68 P A VV Sbjct: 81 PQAAKVV 87 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 41/64 (64%), Positives = 46/64 (71%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKG+GFI P+D S DVFVHFSAIQ N FK L EN VEF ++GPKG A + Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VVAL 70 V L Sbjct: 64 VTKL 67 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 48/64 (75%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VKWFN EKG+GFITP DGSKD+F H+S I S +K+L ENQ V F + GPKGP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 HVVA 69 ++ Sbjct: 63 NIKV 66 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWFN KGFGFI+ G DVFVHF AI+ + L E Q VEF I KG Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAVHVVAL 70 A VV + Sbjct: 231 LQAEDVVPV 239 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 36/64 (56%), Positives = 42/64 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN KGFGFITP G +D+F HFSAI FKTL E Q+V F + GPKG A Sbjct: 2 QTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQA 61 Query: 65 VHVV 68 ++ Sbjct: 62 SNIK 65 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 66 HVVAL 70 +V L Sbjct: 86 VIVPL 90 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + TG VKWF+ +KGFGFI P DG +D+FVH ++I+S+ F+TL+E + VEF +++G G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAVHVVAL 70 AV V A+ Sbjct: 64 RTKAVEVTAV 73 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 40/64 (62%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+ KWFN +KGFGF+TP DG KDVFVH I+ + F++L EN+ VEF KG A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 HVVA 69 V Sbjct: 132 LVTG 135 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 49/67 (73%), Positives = 54/67 (80%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHFSAIQ N FKTL E Q VEF I++G KGPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AVHVVAL 70 AV+V A+ Sbjct: 63 AVNVTAI 69 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG VKWFN KG+GFI DVFVH+ AI+ + ++L E Q+VEF + G K Sbjct: 68 MAERETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 40/63 (63%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN EKGFGFI G DVF HFS I ++ ++ L E Q V F + G KGP AV+ Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VVA 69 +V Sbjct: 64 IVP 66 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 43/66 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN KGFGFI P+ G +DVF HFSAI + F+TL + V F + +GPKG A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 VHVVAL 70 ++ L Sbjct: 62 QNIAPL 67 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 43/65 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI DG DVF H +AIQ++ F+TL E Q+VEF GPKG A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 HVVAL 70 +V + Sbjct: 63 NVRVV 67 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK----TLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ + ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 EGEKGAEAANVTG 156 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENG 58 K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 PKGPAAVHVVA 69 KG A +V Sbjct: 269 EKGAEAANVTG 279 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN + G+GFI D D+FVH +A+ N+ ++L + ++VEF + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 NGPKGPAAVHVVA 69 G KGP A +V Sbjct: 114 EGQKGPEAANVTG 126 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V F + GPKG A Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 HVVAL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 41/68 (60%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 ++ ++G VKWFN KG+GFI G +D+F H+SAIQ ++TL Q V F I GPKG Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAVHVVA 69 A + Sbjct: 65 LHATDIRP 72 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G VKWFN + G+GFI D +D+FVH +AI N+ +++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 73 VGEKGREAANVTG 85 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 147 EGEKGAEAANVTG 159 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++G+VKWFN EKGFGFI + G DVFVHF AI +TL E Q+V F + G KGP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 VHVVAL 70 +V + Sbjct: 92 ENVSIV 97 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + G VKWF+ +KGFGFITP DG +D+FVH S I+S F++L E + VEF +E+G G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAVHVVA 69 AV V Sbjct: 67 TKAVDVTG 74 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 94.7 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN +KGFGFI G ++FVHF AI+ + L + Q V F + KG A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSG-DEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 66 HVVAL 70 +V L Sbjct: 173 NVSIL 177 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKG+GFIT +DG KDVFVH+S+I S FKTL E Q V + + +G A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 HVVAL 70 +V + Sbjct: 82 NVTVV 86 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 94.7 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + TG VKWFN EKGFGF++ + S DVFVH+ AI + +TL E Q+V F + G KG Sbjct: 3 APQHTGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKG 61 Query: 62 PAAVHVVAL 70 A +V L Sbjct: 62 LLAANVTPL 70 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 94.4 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 45/69 (65%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN KGFGFI P DGS+++FVH + I F+++ E +EVE+ +++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAVHVVA 69 P AV+V Sbjct: 61 APKAVNVTG 69 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFN EKG+GFITP+ G D+FVHF AI+ N FK+L E Q+V F G K Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI P+DG +D+F H+S IQ +++L QEV F ++ GPKG A + Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 67 V 67 + Sbjct: 64 I 64 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK++G VKWFN ++G+GFI D +DVFVH +AIQ+N+ +++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 NGPKGPAAVHVVA 69 +GPKG A +V Sbjct: 85 SGPKGLEAANVTG 97 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 NGPKGPAAVHVVA 69 KG A +V Sbjct: 86 EAAKGSEAANVTG 98 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN EKGFGFI +DG DVFVHFSAIQ + +K+L E Q+VEF I +G +GP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 VHVVAL 70 +VV L Sbjct: 60 ANVVKL 65 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN---DFKTLTENQEVEFGIEN 57 ++ K+TG VKWFN + G+GFI D +DVFVH SAI +N +++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GPKGPAAVHVVA 69 G KG A +V Sbjct: 119 GEKGNEAANVTG 130 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFITP G D+F HFS +Q N FK+L E Q+V + G KGPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 HVVAL 70 + + Sbjct: 122 KIEPI 126 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQ--SNDFKTLTENQEVEFGIENG 58 M+ + G VKWFN EKG+GFI ++G KDVFVHF + +L+E Q+V F + G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 PKGPAAVHVVAL 70 KGP A +V L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKG+GFIT +DGS DVFVHFSAIQ + +KTL E Q V F +E+ +GP AV Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 66 HV 67 +V Sbjct: 62 NV 63 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 93.2 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +M G VKWFN +KG+GFI+ + KDVFVH+S + FK+L E +VEF + G KGP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AVHVVAL 70 A +V L Sbjct: 78 ATNVTKL 84 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + G+VKWFN KGFGFI G +D+FVHF AIQ + +++L + ++VEF + G K Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 60 GLQAEEVRRV 69 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + TG V WFN KG+GFITP DGS ++FVH S+I S +++LT VEF I G G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAVHVVA 69 AV+V A Sbjct: 68 KTKAVNVTA 76 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+TG+VKWFN + G+GFI D +DVFVH SAI N+ +++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 144 IGEKGNEAANVTG 156 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 150 EGEKGAEATNVTG 162 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 116 EGEKGAEAANVTG 128 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 43/65 (66%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFITP D DVFVH+S IQ+ FKTL EN V+F I G KGP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 66 HVVAL 70 V + Sbjct: 63 GVTLV 67 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN +KGFGFI +G DVFVH+SAIQS+ FKTL E Q V F ++ G KGPAAV Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 66 HVVAL 70 +V + Sbjct: 86 NVKPI 90 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 92.4 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H SAI N+ +++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 NGPKGPAAVHVVAL 70 G KG A +V L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS +M G+VKWFN KGFGFITP+ G D+FVHF AIQ FK+L E Q+V F G K Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAVHVVAL 70 G A V A+ Sbjct: 60 GMQADQVQAV 69 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 NGPKGPAAVHVVA 69 KG A +V Sbjct: 77 EAAKGSEAANVTG 89 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 41/64 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 +G+VKWFN EKGFGFI G DVF H+S I + F+ L E Q+V F I G KGP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 HVVA 69 ++V Sbjct: 63 NIVP 66 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI ++G ++FVH +I ++L + V + + KGP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENG-DEIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 66 HVVAL 70 V AL Sbjct: 184 EVEAL 188 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFI + G DVFVHFSAI +K+L E Q VEF + G +GP A Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 66 HVVAL 70 +VV L Sbjct: 62 NVVKL 66 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN EKGFGFI ++G DVFVHFSAIQ + FK+L E Q V F +E G +GP A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 66 HV 67 +V Sbjct: 62 NV 63 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 92.0 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + TG+V+WF+ +KGFGFITP +G +D+FVH S+I+S+ F++L E + VEF I G G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAVHVVA 69 AV V Sbjct: 64 TKAVDVTG 71 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 91.7 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ +G KWFN KG+GFI P++G D+FVH +AI++ F++L E ++VEF +E G Sbjct: 22 DRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGR 81 Query: 63 -AAVHVVA 69 A +V Sbjct: 82 KKARNVTG 89 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 91.7 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN EKGFGFI + G DVFVHFSAIQ + FKTL E QEV F I G +GP A Sbjct: 2 QTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQA 60 Query: 65 VHVV 68 +V Sbjct: 61 ANVT 64 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 91.7 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN +KG+GFIT +DG+ DVFVHFSAIQ++ FKTL E Q+V F E+ +GP A + Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VVA 69 VV Sbjct: 63 VVP 65 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+P KG+GFI +DG DVFVHFSAI+ N FKTL E Q VEF I G +GP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 VHVVAL 70 VV L Sbjct: 60 ADVVKL 65 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG VKWFN EKGFGFI DG+ DVFVHFSAI + FK+L E QEV F +E G +GP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 KNVVKL 67 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 40/61 (65%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G KWFN KG+GF+TP DG ++VFVH S IQ + F++L E +EVEF + +G A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 81 EGEKGAEAANVTG 93 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK--GPA 63 TG VKWFNPEKGFGFI P DG D FVH SA++ L E Q+V + + + + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 64 AVHVVAL 70 A ++ + Sbjct: 110 ASNLTLV 116 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVVA 69 G KG A V Sbjct: 82 EGDKGDEASEVTG 94 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MSN+ G VKWFN KGFGFITP+ G+ D+FVHF +IQ FK+L E Q+V F + NG K Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAVHVVAL 70 G A V + Sbjct: 60 GLQADEVQVV 69 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG-PA 63 ++G+ KWF+ KGFGFITP DGS+D+FVH I+ F++L +++ VE+ IE KG Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AVHVVA 69 AV+V Sbjct: 71 AVNVSG 76 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 38/63 (60%), Positives = 46/63 (73%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN +KGFGFIT ++GS DVFVHFSAIQ + FK+L E Q V F +E +GP AV Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 66 HVV 68 +V Sbjct: 62 NVT 64 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI P+ G +D+F H+S IQ + ++TL Q V+F + GPKG A Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 66 HVVAL 70 +V + Sbjct: 63 VIVPV 67 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 M ++ G+VKWFN + G+GFI +D S D+FVH SAI N+ ++L E +EVEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 NGPKGPAAVHVVA 69 G KG A V Sbjct: 82 EGDKGDEASEVTG 94 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 G VKWF+ +KG+GFIT +D + DVFVHF+ IQ FKTL + Q+VEF + KGP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 65 VHVVAL 70 +V L Sbjct: 63 KNVRVL 68 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 +K+ G VKWF+ +KGFGF+ P DGS +VFVH SAI +N F++L + + VEF + P G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAVHVVA 69 A++V Sbjct: 100 WKALNVTG 107 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KGFGFI +G+ DVFVHFSAI+ +K L E V F + G KGPAA Sbjct: 69 EGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAAD 127 Query: 66 HVVAL 70 +V L Sbjct: 128 NVELL 132 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 MS + +G VKWFN EKGFGFITP+ G D+FVHF AIQ N FK+L E Q+V F G K Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN EKGFGFI G DVFVH+SAI + F++L ENQ V F + +G GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 66 HVVA 69 +V Sbjct: 62 NVSP 65 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++++++G VKWFN + G+GFI D +DVFVH +AI N+ +++ + ++VEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 89 EGEKGNEAANVTG 101 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPK 60 + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + K Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 61 GPAAVHVVA 69 G A +V Sbjct: 63 GSEAANVTG 71 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 40/64 (62%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + TG VKWFN KGFGFI P G+KDVFVH SA++ + L +NQ+V F IE G G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAV 65 A Sbjct: 111 REAA 114 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++PEKG+GFI DG D+FVH SAI ++ L E VEF + + PKGP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 HVVA 69 HV Sbjct: 60 HVRV 63 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKD-GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN KGFGFI + +D+FVHFSAI+ + +KTL Q+V F + +GPKG Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AVHV 67 A+ + Sbjct: 62 AIKI 65 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ G VKWFN EKG+GFI G KDVFVH SAI KTL E Q+V + G K Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 33/55 (60%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KGFGFI P G DVFVH SA+Q TL E Q+V + I + Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+PEKG+GFI + G DVFVHFSAIQ FKTL E Q+VEF I G +GP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 VHVV 68 +V+ Sbjct: 60 ANVI 63 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +S K+TG+VKWFN + G+GFI D +D+FVH SAI N+ +++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 84 EGEKGHEAANVTG 96 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 89.7 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 38/64 (59%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KG+GFI S D+F HFS++Q + +KTL Q V F + KG A+ Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 66 HVVA 69 ++V Sbjct: 63 NIVP 66 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ + G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + VEF + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 N-GPKGPAAVHVVA 69 KG A +V Sbjct: 86 EAAKKGSEAANVTG 99 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++NK+TG VKWFN + G+GFI D +DVFVH SAI N+ +++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 80 IGEKGHEAANVTG 92 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGP 59 M+ + G+VKWF+ +KG+GFI +G D+FVH+S I S FKTL Q VEF + GP Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 KGPAAVHVVAL 70 KG A +VV L Sbjct: 60 KGLHARNVVPL 70 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI + G DVF HFSAI S+ FKTL E Q V+F + G KGP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 HVVAL 70 ++V + Sbjct: 64 NIVCI 68 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 ++ K+ G VKWFN G+GFI D +DVFVH +AI+ N+ +++ + + EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 NGPKGPAAVHVVA 69 G KG A +V Sbjct: 114 EGGKGAEAANVTG 126 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G VK F+ GFGFITP D +D+F+H S+++ +D+++L ++ +E + +G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAVHVVAL 70 G AV V AL Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFN KGFGFI ++G +DVFVH S I ++ FK+L E +V F IE G KGPAA + Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVAL 70 V + Sbjct: 63 VTVV 66 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFIT-PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 + K+ G+ +WFN +KGFGF+ S+D+F H + I+ F++L E +EVEF + G Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 KGPAAVHVVAL 70 KGP A+ +V Sbjct: 69 KGPQAIEIVRF 79 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFNPEKG+GFI+ ++G DVFVHFSAI +KTL E Q VEF + +G A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 VHVVAL 70 V+V + Sbjct: 60 VNVRKV 65 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSK---DVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 G KWFN ++G+GFITP S+ DVFVH S+I F++L E V+F + KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AVHVVA 69 AV VV Sbjct: 89 AVKVVG 94 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K G+VKWFN KG+GFI +DVFVHFSAIQ + +KTL E + VEF + GPKG Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AVHVVA 69 A +VV Sbjct: 80 AANVVR 85 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN KGFGFIT DG +++FVHF +I + L + Q V F N KGP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AVHVVAL 70 A +V L Sbjct: 139 AENVEPL 145 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 ++ G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L + VEF +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAVHVVA 69 P A+ V Sbjct: 73 PKAIEVSG 80 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK+FN EKG+GFIT + G +D+FVH+SAI ++ +KTL E QEV F + GP+G A Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 HVVAL 70 +V + Sbjct: 62 NVRGI 66 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIEN 57 + K+ G VKWFN + G+GFI D ++D+FVH +AI +N+ ++L +N+EV F I Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GPKGPAAVHVVA 69 G KG A V Sbjct: 78 GSKGLEAASVTG 89 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+ +KG+GFIT +G DVFVH+SAI+ FKTL E Q VEF I+ G KGP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 VHVVAL 70 HV + Sbjct: 60 AHVKVV 65 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 38/64 (59%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VKWFNP KG+GF+ P DG KDVFVH SA++ + +L E +V + + G A Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVAL 70 + L Sbjct: 116 NLRL 119 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI--QSNDFKTLTENQEVEFGIENGPKGP 62 +TG VKWF+ EKG+GF+T D DVFVHFSAI FKTL + Q VEF ++ KGP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAVHVVAL 70 A +V L Sbjct: 63 RAKNVRVL 70 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFN EKG+GFI +DG DVFVH+SAI+ + FKTL E Q+VEF + KGP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 VHVVAL 70 V + Sbjct: 61 SKVRKV 66 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +M+G VKW++P KGFGF++ KDG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAVHVVA 69 A + Sbjct: 233 REAQSITV 240 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 33/63 (52%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP ++ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 VAL 70 ++ Sbjct: 125 TSV 127 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 87.8 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +S ++ G V WF +KG+GFI+ +D +DVFVH +AI + ++ + + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 NGPKGPAAVHVVA 69 G G A +V Sbjct: 124 QGEWGTEAANVTG 136 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFK-TLTENQEVEFGIENGP 59 M+ + G VKWFN +KG+GFI P DGSKDVFVH + + + L E +EV + +E P Sbjct: 1 MAQR--GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTP 58 Query: 60 KGPAAVHVVAL 70 KG +A++V L Sbjct: 59 KGLSAMNVERL 69 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-FKTLTENQEVEFGIENGPKGPAA 64 G VKWFN KGFGFI+ +D DVFVH++AI+ N ++ L ENQEVEF I GPKG A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 65 VHVVAL 70 +V L Sbjct: 62 CNVKKL 67 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 41/70 (58%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++TG+VKWF+ KG+GFI P++G DV VH S ++ + L E V PK Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAVHVVAL 70 G A+ VV + Sbjct: 94 GAQAIRVVDV 103 Score = 66.6 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN +G+GF+T +G+ D+F+H ++ + L Q++ GPKG + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 68 VA 69 Sbjct: 197 AP 198 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 87.0 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 36/64 (56%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V+WFN E+GFGF+ P DGS D+FVH S I + + L E Q V F + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 HVVA 69 V Sbjct: 115 DVRI 118 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 42/68 (61%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S +MTG VKW++P KGFGF++ DG KDVFVH SA+ +L E Q+V G+ G KG Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAVHVVA 69 A + Sbjct: 272 REASSITV 279 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 32/63 (50%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN EKGFGF+ DGS D F+H A+++ L + G KGP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 68 VAL 70 ++ Sbjct: 141 NSV 143 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 2/64 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGP 62 TG VK+FN KGFGFITP +G KDVFVH SA++++ ++L + Q+V F +E KGP Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 63 AAVH 66 AV+ Sbjct: 63 KAVN 66 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 87.0 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 + G VKWFN +KGFGFI ++G +D+FVHF A+ L E Q+VE+ I G KGP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AVHVVAL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 38/64 (59%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKWFN KG+GFI + +D+F+H+S+I + +KTL Q V F G +G AV Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 66 HVVA 69 ++ Sbjct: 63 DIMP 66 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KG+GFI +DG +DVFVH+S I ++ ++ LTE + VE+ ++ GPKG A Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 HVV 68 V Sbjct: 62 QVK 64 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQ-SNDFKTLTENQEVEFGIENGPKGPAA 64 TG VKWFN EKGFGFI G DVFVHF+AIQ + K L E Q+V+F +E GPKG A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 VHVVAL 70 +VV L Sbjct: 62 ANVVKL 67 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 38/68 (55%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 G KWF+ K +GF+TP DGS DVFVH I+ +++L N+EVE+ + KG Sbjct: 61 ELYRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGR 120 Query: 63 AAVHVVAL 70 A V + Sbjct: 121 EATTVTGV 128 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK--GPA 63 +G VKWFN KGFGFI P DG +DVFVH SA+ L E +VE+ +E + A Sbjct: 58 SGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGKLA 117 Query: 64 AVHVVA 69 A +V Sbjct: 118 ATSIVV 123 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 37/55 (67%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G+VKWFNP KGFGFI P+ G +D+FVH SA++ L E Q V+F +E + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQ-SNDFKTLTENQEVEFGIENGPKGPAAVH 66 VKWF+ +KG+GFI D +DVFVH+S IQ +DFKTL +Q V F + +GPKG A+ Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 67 VVAL 70 V L Sbjct: 65 VAPL 68 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 3/65 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGPAA 64 G VKWFN EKG+GFI + GS+DVF HFSAIQ+ FK L E EVEF IE G KGP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 VHVVA 69 ++V Sbjct: 63 RNIVV 67 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G +KWFN KGFGFIT DG++ VFVHF ++ + + Q V + + +GP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 HVVAL 70 V L Sbjct: 119 DVSPL 123 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 84.7 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KGFGFI P DGS DVFVH SA++ + L + Q++ + + K Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G VK+FN +KGFGFI +DG DVFVHFS IQ++ FKTL E Q V + ++ +G A++ Sbjct: 28 GTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQAIN 86 Query: 67 VVAL 70 VVA+ Sbjct: 87 VVAI 90 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 32/61 (52%), Positives = 40/61 (65%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VKWFNP KG+GFI P G KDVFVH SA+Q ++L E Q+++F IE G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 V 65 Sbjct: 93 A 93 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 84.7 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K +G VK+FN KGFGFI DG D FVH SA++ +L E + F +E +G Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAV 65 A Sbjct: 293 YAA 295 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK+FN +KGFGF+ DG +DVFVH SA++ L E Q + F + + +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 H 66 + Sbjct: 197 N 197 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 4/66 (6%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG VK+FN KGFGFI D+FVH SA+ + EN +V F IE+G KG A Sbjct: 137 QTGTVKFFNETKGFGFIKSDSSGDDIFVHVSALIDQ----IHENDKVRFSIEHGRKGLNA 192 Query: 65 VHVVAL 70 V++ L Sbjct: 193 VNIKLL 198 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +S ++ G+VK F+ GF FITP DGS+D+F+H S+++ + +++L ++ +E + + Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAVHVVA 69 G AV V A Sbjct: 62 GRTKAVDVTA 71 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KGP 62 TG VK+FN EKGFGFI P DG D+FVH SA+Q++ L +NQ+V + E KGP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 63 AAVHVVA 69 AV++ Sbjct: 75 KAVNITI 81 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 40/64 (62%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+ ++GFGFI P +G +++F H I +KTL Q V + +E+G G AV Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 HVVA 69 +++ Sbjct: 64 NIIP 67 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 +G VKWFN KGFGFI P DG+ DVFVH SA++ ++L E Q+V + I K Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIEN--GP 59 + + G KWFN KG+GF+ +D+FVH S + F++L E + V + I+ Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 KGPAAVHVVA 69 KG A V Sbjct: 110 KGREAYAVSG 119 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--KG 61 + +G VK+F +KGFGFITP +G DVFVH SA++ + TL Q + F E KG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAVHVVA 69 P AV + Sbjct: 181 PKAVELRL 188 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 40/66 (60%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKW+NPEKGFGFI + G KDVFVH + + + L+E Q V + GPKG Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAVHV 67 P A + Sbjct: 228 PEARGI 233 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFNPEKGFGF+ DGS DVF+H A+++ +++ ++ + G KG V Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 68 VAL 70 + + Sbjct: 129 LEV 131 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + +G VK+FN KGFGFI DG D FVH SA++ L E ++F +E +G Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAV 65 A Sbjct: 143 YAA 145 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S ++ G VKWF+ KG+GFIT + G +DV +H S ++ + T E V KG Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAVHVVAL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 66.2 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q + G KG A + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 VA 69 Sbjct: 168 EP 169 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 41/64 (64%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G+VKWFN KGFGFI+ + D+F H+S I+ + +++L Q+V+F + + KG A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVAL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI----QSNDFKTLTENQEVEFGIENGPK 60 +TG VKWFN ++G+GF+ D +D+F+H SAI + K++ E +E+ F I G K Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAVHVVAL 70 G A +V A+ Sbjct: 89 GNEAANVSAI 98 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWF+P +G+GF+ P +G DVF+H S + L E +EF IE KG AV Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 66 HVVAL 70 ++ AL Sbjct: 60 NIEAL 64 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG + VF+H SA+ TL Q VEFGI G KG A+ Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 HVVAL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP- 62 K G+V WFN KGFGF+T DG DVFVH S I + F++L + + VEF +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAVHVVA 69 AV V Sbjct: 103 KAVKVTG 109 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWF+ +GFGFI DV VHFS ++ + +TL E + + +G Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAVHVVAL 70 A ++A+ Sbjct: 91 LQARRILAI 99 Score = 61.2 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 33/61 (54%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 +VKWFN KG+GF+ ++D+F+H ++ L ++ I G KGP AV + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 V 68 + Sbjct: 196 I 196 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND-----FKTLTENQEVEFGI 55 ++ + G VKW++ + +GFI+ DG KD+FVH +AI + +TL +++EV F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 ENGPKGPAAVHVVA 69 G GP A +V Sbjct: 122 VEGKNGPEAANVTG 135 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWFN +KGFGFI+ +DG KD F+HFS I FKT+ E +EVEF IE+G KGP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 VHVV 68 +VV Sbjct: 60 TNVV 63 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ KGFGF+T DG + VFVH SA+ S +L Q VEFG+ G +G A+ Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 HVVAL 70 V L Sbjct: 65 SVRTL 69 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 +G+ KWFN GFGFI+ P D + DVFVH S + F++L E + +EF + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 PKGPAAVHVVA 69 KG AV V Sbjct: 65 SKGLEAVRVSG 75 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 82.4 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 8/70 (11%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVH--------FSAIQSNDFKTLTENQEVEFGIENG 58 G KWFN KG+GFITP +G DVFVH S + + F++L + V F I Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 PKGPAAVHVV 68 P+G A VV Sbjct: 71 PEGNEATAVV 80 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 7/73 (9%) Query: 4 KMTGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE 56 + TG KWFN GFGFI+ P D DVFVH S + F++L E + VEF + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 NGPKGPAAVHVVA 69 KG ++ V Sbjct: 89 KSSKGLESIRVTG 101 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKGPAAVH 66 VKWF+ +KG+GFI DG +D+FVHFSAI S FK L ++ EVEF I+ KG A + Sbjct: 6 KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQAKN 65 Query: 67 VVAL 70 V + Sbjct: 66 VCEI 69 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 35/55 (63%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 TG VKWFN KG+GFI P +G KDVFVH SA++ + L E Q++ + + + Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKR 57 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIE 56 +++ +G+VKWFN G+GF+ D +DVF+H +AI N+ +++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 NGPKG-PAAVHVVA 69 G KG P A +V Sbjct: 82 EGEKGLPEAANVTG 95 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI--QSNDFKTLTENQEVEFGIENGPKGPA 63 G V+WF+ E+GFGF+ DG+ D+FVH S I + ++L E Q VEF I G +GP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 64 AVHV 67 A V Sbjct: 63 ARRV 66 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 V W++ KGFGF+TP G D FVH ++ L E V F + G +GP A V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 VAL 70 + Sbjct: 223 RVV 225 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+V ++ E+GFGFITP G D+FVH S ++ + L E V F + +GP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 66 HV 67 V Sbjct: 313 RV 314 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 G V W+ P KG+GF+TP G ++F H SAI + E Q V F + G KGP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 ++ G VKWF +KGFGF+T DG KDVFVH S ++ ++L + V + PKG Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AVHVVAL 70 A + L Sbjct: 192 ATWIQLL 198 Score = 68.9 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 35/63 (55%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KGFGF+ P DG+ D F+H S + L E EV I GPKGP + + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRL 105 Query: 68 VAL 70 V + Sbjct: 106 VDV 108 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 36/64 (56%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G V WF+ EKGFGFITP D S VFV F AI++ ++TL V + E GP AV Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 HVVA 69 V Sbjct: 113 AVRP 116 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 4/68 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP- 59 M+ TG+VK+FN +KGFGFI P +G D+FVH SA+Q++ L+ENQ+V F E Sbjct: 1 MAE--TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRR 58 Query: 60 -KGPAAVH 66 KGP AV+ Sbjct: 59 GKGPKAVN 66 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G+ KWFN +KG+GFIT ++G +DVFVH S I ++ F++L EN++VE + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAVHVVA 69 A+HV Sbjct: 61 KAIHVTG 67 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ +++G +K +N +KGFGFI P +G +D+FVH S + + F + Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQGGMP-KIGESLTFLVTLNQD 66 Query: 61 GP-AAVHVVA 69 G A++V Sbjct: 67 GKNKAINVQR 76 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 40/65 (61%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+VK + E+G+G+ITP G +DVFVHF+ I FK L + ++V + + G K P A Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 HVVAL 70 V + Sbjct: 63 QVQPI 67 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP-AA 64 TG VKWFN KGFGFI P DG KDVFVH SA++ K L++NQ++ + +++G G +A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 65 VHVVAL 70 + L Sbjct: 78 GDLRLL 83 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF-KTLTENQEVEFGIE-NGPKG 61 + G V F+ KGFGFI P DG +D+FVH SAI+S+ ++L E+ VEF + + Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAVHVVA 69 AV V A Sbjct: 73 YQAVDVTA 80 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSND----FKTLTENQEVEFGIENGPKG 61 G VK+F +KGFGFI P DG +DVFVH++ I+ + FK L E VE+ + KG Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 62 PAAVHVVAL 70 A VV L Sbjct: 63 TQAKDVVKL 71 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M++K+ G VKWFN KG GFI + DVFVH+ +I S KTL + Q V F I Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAVHV 67 G A V Sbjct: 60 GRQASEV 66 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKG 61 + TG V F+ +KGFGFI P G KD+FVH SAI+S+ ++TL E+ VEF I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAVHVVA 69 AV V A Sbjct: 72 YQAVDVTA 79 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%) Query: 1 MSNKMT-GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 M +++ G KWF+ +KGFGFIT +DG D+FVH + I++ F+ L E + VEF ++ G Sbjct: 83 MEDQIQRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGH 141 Query: 60 KG-PAAVHVVA 69 G AV V Sbjct: 142 DGKRKAVSVTG 152 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKT------LTENQEVEFGI 55 S + G VKWFN KGFG+ITP DG DVFVH SA++ F+ T+ VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EN---GPKGPAAVHVVAL 70 E+ + AV V + Sbjct: 68 EHESPTDERLKAVCVTGI 85 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G +KWFN KGFGFI DG++ VFVH+ ++ +++ + Q V + + +GP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 66 HVVAL 70 V A+ Sbjct: 134 GVKAV 138 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGS-KDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S K++G +KWF+ KG+GFI P D+ +H ++++ + F+T E + + +G + Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAVHVVAL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFIT-------PKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 TG KWFN GFGFI+ P D DVFVH S + F++L E + VEF + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 PKGPAAVHVVA 69 KG ++ V Sbjct: 117 SKGLESIRVTG 127 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ +AI + K+L E Q+VEF Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAVHVVAL 70 GP+A V+A Sbjct: 60 GPSAADVIAF 69 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G + F+ +G+GFI P +G +DVF+H + + + + L +VEF +E G +G A Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VVA 69 V Sbjct: 68 VRI 70 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 6 TGLVKWFNPEKGFGFITPK-------DGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG 58 +G+ KWFN GFGF++ D DVFVH S + F++L E + VEF + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 PKGPAAVHVVA 69 KG ++ V Sbjct: 95 SKGLESLQVTG 105 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G+VK+F+ EKGFGF+ G KDVFVH A++ + KTL Q V G KG Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAVHVVAL 70 P A V + Sbjct: 192 PQADTVAII 200 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++ VKWFN KGFGF+ P DGS D F+H SA++ + E + + G +GP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 VHVVAL 70 V V + Sbjct: 109 VMVHEV 114 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 G+VKWFNP KGFGFI P+DG +DVFVH +A++ + L E +V + +E + Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK--GPAAV 65 +VKWFN KGFGFI P +G D+FVH SA++ + L E Q+V + +E + +A Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 66 HVVAL 70 ++ L Sbjct: 175 NLRIL 179 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 S + G VKWF+PEKG+GF+ G +D+FVH S ++ + +L + EVE+ + +G Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERG 188 Query: 62 PAAVHVVAL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG V F+ KG+GFI P G +DVF+H S + + L VEF G +G A+ Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 66 HVVAL 70 V L Sbjct: 63 TVNLL 67 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAI---QSNDFKTLTENQEVEFGIENGPKGPA 63 G VKW+N +KG+GFI D +DVFVH SAI Q K+L E+++V F + G KG Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AVHVVA 69 A++V Sbjct: 65 AMNVTG 70 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKWFN KGFGFI P +G DVFVH + ++ + TL E +V++ + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 HVVAL 70 ++ L Sbjct: 69 NIQLL 73 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G VKWFNP KGFGFI G +++FVHF A+Q+ ++L +V F +G Sbjct: 8 NGQQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRG 66 Query: 62 PAAVHV 67 A +V Sbjct: 67 EQADNV 72 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G+V F+ ++GFGFI S+DVFVH I+ ++L+ Q+VEF E KG +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 VHVVA 69 ++V+ Sbjct: 59 INVIP 63 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG V F+ +G+GFI P DGS DVFVH + + + + LT VE+ +GP A Sbjct: 8 LTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPKA 66 Query: 65 VHVVA 69 V V Sbjct: 67 VLVRV 71 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN-DFKTLTENQEVEFGIENGPKGPAA 64 G +K+F+ +GFGFI P DGS+DVF+H + I + L E Q +E+ E KG +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 65 VH 66 ++ Sbjct: 63 LN 64 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 7 GLVKWFNPEKGFGFITPK-------DGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 G+ KWFN GFGF++ D DVFVH S + F++L E + VEF + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 KGPAAVHVVA 69 KG ++ V Sbjct: 102 KGLESIRVTG 111 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 42/69 (60%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + G VKWFNP K FGFI ++G KDVFVH SA+ + L E Q+V F +E+ Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAVHVVA 69 +AV++ Sbjct: 61 KISAVNLRI 69 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + G++ W++ EKG+GFI P G DVFVH S+++SN L +E+ G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAVHVVA 69 A++V A Sbjct: 167 KLQAINVTA 175 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSN--DFKTLTENQEVEFGIENGPK 60 K G +WF+ +KG+GFI DG KD+FVH+S+IQ+ KTL EN +VEF ++ G + Sbjct: 4 KKEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDR 62 Query: 61 GPAAVHVVAL 70 G AV VV + Sbjct: 63 GAQAVDVVVV 72 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 +TG V F+ +G+GFI P G DVFVH + + + + L VE+ +GP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 65 VHVVAL 70 + V L Sbjct: 61 LTVRVL 66 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKD----GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 ++TG VKWF+ KG+GFI P D KDV +H ++++S+ + E + + P Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 68.9 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KG+GF+ D+FVH ++ + + L + V GPKG + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 Query: 68 VA 69 A Sbjct: 197 EA 198 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+V F+ KG+GFI P +G +DVFVH + + TLT V F + +G +G A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 66 HV 67 V Sbjct: 62 DV 63 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ + TG V WF+PEK +GFIT G +FVH A+ + + L E +EV F + G K Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAG-ASLFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAVHVVA 69 G A V+ Sbjct: 59 GDEANDVLV 67 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G VKW++P+KGFGFI P G KD FVH +A+ + L E Q V G KG + Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 66 HVVAL 70 + + Sbjct: 195 SIRLV 199 Score = 50.8 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 V WFN KGFGF+ DG + ++ ++++ + + E ++ IE P+G V Sbjct: 47 VMWFNAGKGFGFVKLLDG-TEAYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 69 AL 70 + Sbjct: 106 EI 107 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 36/63 (57%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KGFGF++ DG++D+FVH ++ + L +E+ GPKG A+ V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 VAL 70 L Sbjct: 195 RPL 197 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G +KWF+ KG+GF+ +G DV +H +A++ + E V G KG Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AVHVVAL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 75.9 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TGLVKWF+P KGFGF+ +G D+ +H + +++ ++ + +E +G A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 HVVAL 70 V A+ Sbjct: 72 QVHAI 76 Score = 65.5 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF S D+F+H ++ + L + + + G +G A V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 VA 69 A Sbjct: 167 HA 168 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query: 5 MTGLVKWFNPEKGFGFITPKDG-SKDVFVHFSAIQSND-----FKTLTENQEVEFGIENG 58 + G VKW++ +GFI D DVFVH +AI + +TL + +EV F I G Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 PKGPAAVHVVA 69 +GP A +V Sbjct: 66 KQGPEAANVTG 76 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 + +++G V F EKGFGFITP +G + F H S + + + + F K Sbjct: 233 VGAEISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDK 292 Query: 61 GPAAVHVVAL 70 G AA ++ L Sbjct: 293 GLAAHNIRKL 302 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + G V WFN +KGFGFIT DG DVFVH++ I + F++L + V + + + P Sbjct: 1 MRREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAP 59 Query: 63 AAVHV 67 AV V Sbjct: 60 KAVDV 64 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 11/72 (15%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAI----QSNDFKTLTENQEVEFGIEN 57 + ++TG VKWFN + GFGFIT D +D+FVH S+I + +++ E + VEF Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF---- 104 Query: 58 GPKGPAAVHVVA 69 G A V Sbjct: 105 ---GVIATKVTG 113 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 40/67 (59%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 K+ G+VKWF+ KGFGF+T DG D+ +H + +++ ++ E V I+ P+G Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 64 AVHVVAL 70 AV V+ + Sbjct: 70 AVEVLEI 76 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF DVF+H ++ + F L + + + +G +G A + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M+ K G VKWF+ G+GFI+P+DG D++VH +AI + K+L Q+VEF Sbjct: 1 MTLK-KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFH 59 Query: 61 GPAAVHVVAL 70 GP+A V+A Sbjct: 60 GPSAEDVIAF 69 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 11/72 (15%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF----KTLTENQEVEFGIEN 57 S ++TG VKWFN + GFGFIT D +D+FVH S I + K++ + + VEF Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GPKGPAAVHVVA 69 G A V Sbjct: 87 ---GLIASKVTG 95 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP-AAV 65 G VK+FN +KG+GFI +DGS D FVH +A+Q+ TL + Q V + +E G G +A+ Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 66 H 66 + Sbjct: 86 N 86 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 74.7 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 39/67 (58%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA 63 +++G++KWF+ KG+GF+ P +G DV +H + ++ + ++T E + KG Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AVHVVAL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 66.2 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 30/61 (49%) Query: 9 VKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVV 68 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G KG A + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 69 A 69 Sbjct: 225 P 225 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLT---ENQEVEFGIEN 57 M M G VKWFN KG+GFI D +K+ FVH+ +I +N + L +++ V F + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GPKGPAAVHVVAL 70 KG A++++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 ++ + G +K +N E+G GFI G +++FVH SA + + + + F +E Sbjct: 4 LTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRD 62 Query: 61 GPA-AVHVVA 69 G AV + Sbjct: 63 GKKCAVRIHR 72 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G +K +N E+GFGFI P G +D+FVH A S + T Q V F +E GP G Sbjct: 1 MRLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGRP-TVGQAVTFEVELGPNGK 59 Query: 63 A-AVHV 67 A V Sbjct: 60 KRARSV 65 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + G VKWF+P KG+GFI +G + FVH S I F+ L + V + ++ KG Sbjct: 10 ATVEHGTVKWFDPVKGYGFIAGDNGKET-FVHQSDILMRGFRHLETGERVSYRVKATEKG 68 Query: 62 PAAVHVV 68 A+ V+ Sbjct: 69 DKAIDVI 75 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ +KGFGF++ ++G +DV+V SA+ + L Q VEFGI +G +GP A+ Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 HVVAL 70 + L Sbjct: 111 SLKLL 115 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VKW++ EKGFGF++ +DG +DV+V SA+ + L Q VEFG+ G +GP A+ Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 HVVAL 70 + + Sbjct: 74 SLKLI 78 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 32/62 (51%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG VK F+ GFGFI FV ++AI+ +K+L Q V + + G KG + Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 66 HV 67 +V Sbjct: 63 NV 64 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP-A 63 TG VK+FN EKG+GFI P DG+ D+F+H + + + VE+ + GP G Sbjct: 2 QTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGLA-DKLRYPCPRDRVEYEVGKGPDGRLR 60 Query: 64 AVHVVAL 70 A V + Sbjct: 61 AERVALI 67 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G + F+ +G+GFI P G DVFVH + + + V + + +G Sbjct: 3 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLKVA 61 Query: 66 HVVA 69 VV Sbjct: 62 SVVL 65 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 + G++ +N +GFGFI P G VFVH A Q + Q V F +E GP G Sbjct: 1 MQFDGVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPRP-QAGQRVRFAVEAGPGGR 59 Query: 63 A-AVHVVAL 70 A V +L Sbjct: 60 KRACRVESL 68 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP-AAV 65 G +K +N EKG+GFITP +G DVF+H A + + Q + +G +G KG A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRLRAC 62 Query: 66 HVVAL 70 +V + Sbjct: 63 NVQYM 67 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G+VK+FN KGFGFIT + KD FVH S + + E EVEF ++ G KG AV Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 HVVAL 70 +V L Sbjct: 59 NVRVL 63 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 24/43 (55%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTL 45 + G VKWF+ +KGFGFITP DG D+FVH S+I+S F++L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSK-DVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 S G V WF+ KGFGFI P +G + VFV FS+I+ + ++TL E Q V F Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF--VRSAG 69 Query: 61 GPAAVHVVAL 70 AV V L Sbjct: 70 RAEAVAVRPL 79 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G V F+ +G+GFI P+ G +DVF+H + + + + VEF IE+G +G A Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 67 VVA 69 V Sbjct: 63 VRL 65 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 G VK+FN KGFGFI D ++D+FVH S + + E+ V+F +E G KG A Sbjct: 2 QEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLNA 57 Query: 65 VHVVAL 70 V+V + Sbjct: 58 VNVEVI 63 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G + F+ +GFGFI P+DG DVFVH + I ++ L + + EF + G +GP A++ Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 67 VVAL 70 + A+ Sbjct: 65 LSAV 68 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 33/67 (49%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M ++ T VKWFN KGFGF+ DG D F+H S +Q + L E + + G K Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAVHV 67 G + Sbjct: 61 GMQVSEI 67 Score = 68.6 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++ G+VK+F+ +KGFGF+ P G KDV+V +Q L + Q V I G KGP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENG-PKG 61 ++ G + +N ++GFGFI PKDG +VFVH SA + + + + F IE + Sbjct: 1 MRIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRP-QIGEPLSFEIELDKDRK 59 Query: 62 PAAVHVVA 69 AV V Sbjct: 60 KRAVGVSR 67 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWF+ KGFGF S+DVFVH ++ + F L + V + +GP+G A V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 68 V 68 Sbjct: 176 R 176 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 37/66 (56%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+VKWF+ KGFGF+ +G D+ +H + ++S ++ E V + +G A Sbjct: 22 VAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQA 81 Query: 65 VHVVAL 70 V ++A+ Sbjct: 82 VEIIAI 87 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGSK----DVFVHFSAIQSNDFKTLTENQEVEFGIENGP 59 +++G VKWF+ KG+GFI P D + DV +H +++++ +T E + + P Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 KGPAAVHVVAL 70 KG VV L Sbjct: 77 KGWQVSEVVDL 87 Score = 67.8 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 8 LVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHV 67 VKWFN KG+GF+ D+FVH ++ + L +V GPKG + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 V 68 Sbjct: 197 T 197 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 ++G V ++ +GFGF+ P+ G DVF+H + I ++ +L +V F +E +G A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 VHV 67 V+V Sbjct: 66 VNV 68 >UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V4_KINRD Length = 156 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 M++ G V+ F+ +GFGFIT D ++VF H + + + L E V+F ++ G + Sbjct: 1 MASLAKGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEAEDL-EGASVQFTLDQGDR 59 Query: 61 GPAAVHVVAL 70 G A V L Sbjct: 60 GYKATDVRPL 69 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIE-NGPKG 61 + G + + ++GFGFITP G VFVH SA+Q + + V + + +G KG Sbjct: 1 MRFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKG 58 Query: 62 PAAVHV 67 P A++V Sbjct: 59 PRALNV 64 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 71.6 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 M G VKWF+ +KG GFI + + D F H S + E VEF + +GP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 65 VHVVAL 70 V + Sbjct: 58 ATVRIV 63 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K++G VK + +KGFGFI G DVFVHFSAIQ+ + LT QEV+ + G +GP Sbjct: 2 EKISGYVKTWQSDKGFGFIEL-KGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAVHVVAL 70 A V L Sbjct: 61 QAAAVEVL 68 >UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR46_CHIPD Length = 147 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG+V +FN KGFGFI + VF H + + + E V F E GP+G A+ Sbjct: 83 TGVVSFFNLSKGFGFINDDSSKESVFFHMNQLAH----PVKEKDRVSFLREKGPRGFNAI 138 Query: 66 HVVAL 70 +V + Sbjct: 139 NVTKI 143 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 7/73 (9%) Query: 4 KMTGLVKWFNPEKGFGFITPKDGS----KDVFVHFSAIQSND-FKTLTENQEVEFGIENG 58 K+ G VKWF+ KG+GF+ P + +++FVH ++IQS ++TL EN E+EF +E Sbjct: 3 KVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEKE 62 Query: 59 PK--GPAAVHVVA 69 + A++V A Sbjct: 63 AESGKFKAINVTA 75 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G VK F+ +KG+GFIT + +FVH+S I+ + L ++EV I G KGP A Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQA 60 Query: 65 VHVVAL 70 HV L Sbjct: 61 AHVRVL 66 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 71.2 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 TG +KWF+ KG+GFIT DG DVF+H S + + TL + + + +A Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVSAH 62 Query: 66 HVVAL 70 + + Sbjct: 63 DLSLM 67 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVH 66 G + +FN KGFGFI + + FVH S + + + E V + +E G KG AV+ Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 67 VVAL 70 V + Sbjct: 145 VKKI 148 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 32/62 (51%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAV 65 G V+ F+ EKG+G+I P G ++ VHFSAI L Q V F I +GP A Sbjct: 3 EGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAE 62 Query: 66 HV 67 V Sbjct: 63 RV 64 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 71.2 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 6 TGLVKWFNPEKGFGFITPKD---GSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGP--K 60 G +KW+NP+KG+GFITP+ DVF+H SA+ S LTE Q V + Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 61 GPAAVHVVAL 70 +A ++ + Sbjct: 64 KYSAENLKLV 73 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 71.2 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 TG+VK+FN KG+GFI D ++D+FVH + + T+ E V+F + +G KG A Sbjct: 2 QTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLNA 58 Query: 65 VHVVAL 70 V V + Sbjct: 59 VKVKKI 64 >UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12K82_SHEDO Length = 196 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG- 61 ++ G + ++ +KGFGFI P +VF+H SA+++ + E+ + + + +G Sbjct: 1 MRVKGKLVRWDDDKGFGFIRPNLTGPEVFLHISALRNASRRP-QEDDVITYALVADKQGR 59 Query: 62 PAAVHVVA 69 P A + Sbjct: 60 PTAANATL 67 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDF-KTLTENQEVEFGIENGPKGPA 63 TG VKW++ E+G+GF++ DG +DVF+H S I+ F K + E + + F I KGPA Sbjct: 4 YTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPA 62 Query: 64 AVHV 67 A++V Sbjct: 63 AINV 66 >UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacterium RepID=Q1ZUW9_PHOAS Length = 204 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPA- 63 G + +N +KGFGFI P +G +DVF H SA+ + N+ + F I KG Sbjct: 3 QQGKIISWNQQKGFGFIAPDNGEQDVFFHVSALPDKQCRP-RINEAITFCIGKDKKGRMS 61 Query: 64 AVHVV 68 A V Sbjct: 62 ATTVT 66 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTE-NQEVEFGIEN-GPKGPA 63 G + +N E+GFGFI+P DGS VFVH SA + L E + V + + PKGP Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAFR--SRHPLPEVGERVLYYLGPLSPKGPR 84 Query: 64 AVHVVAL 70 A V + Sbjct: 85 ASVVRYI 91 >UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Psychrobacter RepID=Q1QDZ8_PSYCK Length = 253 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG-PA 63 +G +K +N +KG+GFI + S+DVF H +++ + +++ Q V F E K Sbjct: 4 QSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVRMA--QPISKGQRVYFNSERNDKNQLR 61 Query: 64 AVHVV 68 A V Sbjct: 62 ATEVT 66 >UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKA2_HIRBI Length = 166 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNPEKGFGFITPKDG--SKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 ++G VKWF+ KGFGFI P DG ++ +H S ++ + + E + + +G Sbjct: 18 ISGRVKWFDSVKGFGFIIPDDGLDGQEALLHISILREFGVEQVVEGMLISCDVVKRERGY 77 Query: 63 AAVHVVAL 70 V +L Sbjct: 78 QVTEVKSL 85 Score = 57.0 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%) Query: 2 SNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKG 61 + + L+KWFN KG+GF+ +D+F+H ++ + Q+V I GPKG Sbjct: 97 AEREAVLIKWFNRTKGYGFVHRVGEVEDIFLHMVTLRKAGLEEAEPGQKVWVTIGKGPKG 156 >UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriavidus RepID=Q7WXG5_RALEH Length = 191 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K G VK ++ +KGFGFI KDVF H +A+Q+ T T V F + G G Sbjct: 1 MKKAGQVKTWHADKGFGFIDVYADMKDVFFHVTALQTRAV-TPTPGDRVSFELGKGKDGR 59 Query: 63 -AAVHVVAL 70 A++V + Sbjct: 60 IQALNVAIV 68 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAA 64 + G+V WFN KGFGFI + +D++VH+S + + FKTL ++V F + + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 VHVVAL 70 V + Sbjct: 62 TAVRII 67 >UniRef50_UPI0001AEC17A integral membrane protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC17A Length = 165 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGP 62 K G ++ ++ KG+GF+ P G F H A + + + + + +E G Sbjct: 1 MKYQGRIQQWDDAKGYGFVEPNGGGTRAFTHIKAFKQRSRRPVN-GDIIVYEVEQDRNGN 59 Query: 63 -AAVHVVAL 70 A ++ L Sbjct: 60 HRACNISLL 68 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.175 0.586 Lambda K H 0.267 0.0533 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 606,886,216 Number of Sequences: 3077464 Number of extensions: 25872417 Number of successful extensions: 56390 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1111 Number of HSP's successfully gapped in prelim test: 275 Number of HSP's that attempted gapping in prelim test: 54248 Number of HSP's gapped (non-prelim): 1669 length of query: 70 length of database: 1,040,396,356 effective HSP length: 42 effective length of query: 28 effective length of database: 911,142,868 effective search space: 25512000304 effective search space used: 25512000304 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.1 bits)