Phyre 2 alignment of P0AC38 with d1pbya1

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Job Description | P0AC38
Confidence | 7.21% | Date | Thu Jan 5 11:17:06 GMT 2012
Rank | 67 | Aligned Residues | 30
% Identity | 23% | Template | d1pbya1
SCOP info | Cytochrome c | Cytochrome c | Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 448 | . | 450 | . | . | . | . | . | . | . | . | . |  | 460 | . | . | . | . |  |  |  | . | . | . | . | . | 470 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | T | E | A | E | L | D | D | I | F | S | V | . | Q | N | L | M | H | . | . | . | P | A | Y | K | A | K | R | Y | T | D | E | S | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | E | P | E | E | R | A | A | I | V | R | H | L | S | D | T | R | G | L | S | L | A | E | T | E | E | R | R | Y | I | L | E | R | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  | S | G | G | G | T | T |  |  |  |  |  |  | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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