2 c3sljA_ Probab=99.95   E-value=1.8e-23  Score=204.27  Aligned_columns=296  Identities=15%

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf             68999999998757789999998888765554302667765550589998067304565662133100127998887302
Q batch____      1689 TTAELNSALKQVSGSQATTVFREARVLSNRFSMLADAAPKVGNGLAFNVVAKGDPRAELGNNTEYDMLALRKTIDLSESQ 1768 (2003)
Q Consensus      1689 ~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~y~~~~~g~~~~~~~~~ 1768 (2003)
                      +..++......|....+..-+.+...+.++|..+++  .+.+.++|++++++....+.     +||.+.+|+.+|+|+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rlg~~r~--~~~~~gvW~~~~g~~~~~~~-----gy~~~~~G~~~G~D~~~   76 (305)
T c3sljA_           4 ANKEATRNAAALFSVDYKAFLNEVANLNKRMGDLRD--INGEAGAWARIMSGTGSASG-----GFSDNYTHVQVGVDKKH   76 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHCCCTT--CCCSEEEEEEEEEEEEEETT-----TEEEEEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEEECCCEECCC-----CCCCEEEEEEEEEEEEE
T ss_conf             307889989987641078888888889988535404--78756179999834000357-----73110448999767872


Q ss_pred             CCC---EEEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEECCCEEEEEEEEEEEEECEEEEEEEECCCEEEEEEEEE
Q ss_conf             562---44789998655467605676442101355333543325863998889988650221789996072467886456
Q batch____      1769 TMS---LEYGIARLDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVK 1845 (2003)
Q Consensus      1769 ~~~---~~~g~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~R~~~~~~~~~~a~~~y~ 1845 (2003)
                      ...   |.+|++++|.+.+++. +.++.+.+...+++...+...+.|++...+.|++.++|++|     .....++++|+
T Consensus        77 ~~~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~g~Y~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  150 (305)
T c3sljA_          77 ELDGLDLFTGFTVTHTDSSASA-DVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTA-----TFAGLGTRDYS  150 (305)
T ss_dssp             EETTEEEEEEEEEEEEEEEEEC-SSEEEEEEEEEEEEEEEEEETTSEEEEEEEEEEEEEEEEEE-----SSTTCEEEEEE
T ss_pred             CCCCCEEEEEEEEEEEEEEEEE-CCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEEEEEEE-----EECCCCEEEEE
T ss_conf             0566418999998787645530-45511344689899988850786389999997776656787-----40465101110


Q ss_pred             EEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCEEEECCCCEEEEECCCCCCEEEEEEEEEEEC-CCCCCEEEEEE
Q ss_conf             77999994567879638974999977668898650756650654120021366540375057799960-57767178976
Q batch____      1846 QQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQERNAGDFNLNMNSGSETAVDSIVGLKLDY-AGKDGWSASAT 1924 (2003)
Q Consensus      1846 ~~~~~~~~e~g~~~~~~~~~~i~Pyagl~~~~~~~~~~~E~ga~~~~L~v~s~~~~~~~~~~G~~~~~-~~~~~~~~~~~ 1924 (2003)
                      .+.+.+..|++|.|++++.+.|+||++|.|.|+++++|+|++ +.++|.+++.+..++...+|+|+.+ .-.+.|+....
T Consensus       151 ~~~~~~~~~~gy~~~~~~~~~i~P~~~l~y~~~~~~~~~e~~-~~~~l~~~~~~~~s~~~~~G~~~~~~~~~~~~~~~~~  229 (305)
T c3sljA_         151 THSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKD-QGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTAR  229 (305)
T ss_dssp             EEEEEEEEEEEECEESSSSEEEEEEEEEEEECBCCCEEEEEE-TTEEEEEEECCBCCEEEEEEEEEEEEEEETTEEEEEE
T ss_pred             EEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCC-CCEEEEEECCCCEEEEEEEEEEEEEEEECCCEEEEEE
T ss_conf             137899955668876178679988999999997527623047-7226787227614789998754125752586089999


Q ss_pred             ECCCCCCCEECCCCEEECCCCCCCEEEECCCCCCCCEEEEEEEEEEEE-ECCEEEEEEEEEEECCCC-CCCEEEEEEEEC
Q ss_conf             224653110032110103555651354114667563254657656874-124058641201114574-444279997513
Q batch____      1925 LEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYS-SKESSLNLDAYNWKEDGI-SDKGVMLNFKKT 2002 (2003)
Q Consensus      1925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 2002 (2003)
                      ++.++.+++....+..........++.     +..+.-..+++|++|. .+.+.|.++|...+++.. ++..+.+.|+|+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~lG~~~~i~~~~~l~~~~~~~~g~~~~~~~~~~~G~ry~  304 (305)
T c3sljA_         230 AGLGYQFDLLANGETVLRDASGEKRIK-----GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYS  304 (305)
T ss_dssp             EEEEEEEESCCCCEEEEEETTEEEEEE-----CCCCEEEEEEEEEEEEETTTEEEEEEEEEEESSSEEEEEEEEEEEEEE
T ss_pred             EEEEEEEECCCCCEEEECCCCCCEEEC-----CCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEEEEEEE
T ss_conf             999888622677238962455303503-----588847999999999971887999999986527741127999999997


Q ss_pred             C
Q ss_conf             9
Q batch____      2003 F 2003 (2003)
Q Consensus      2003 ~ 2003 (2003)
                      |
T Consensus       305 F  305 (305)
T c3sljA_         305 F  305 (305)
T ss_dssp             C
T ss_pred             C
T ss_conf             9