11 c2jmmA_ Probab=97.08   E-value=0.024  Score=34.43  Aligned_columns=146  Identities=18%

Q ss_pred             EEECCCEEEEEEEEEEEEECEEEEEEEECCCEEEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCEEE
Q ss_conf             33258639988899886502217899960724678864567799999456787963897499997766889865075665
Q batch____      1806 MSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQE 1885 (2003)
Q Consensus      1806 ~~~~~~~~~~~~~~~~~~~~d~~R~~~~~~~~~~a~~~y~~~~~~~~~e~g~~~~~~~~~~i~Pyagl~~~~~~~~~~~E 1885 (2003)
                      +++++.|++-..+.++.-+.+                    ..+.....+||.|        .|+-++.+.|...+.++.
T Consensus         1 ~p~d~~~YvG~~~G~~~~~~~--------------------~~~~~g~~~GY~f--------~~~~~~E~~y~~~~~~~~   52 (156)
T c2jmmA_           1 MPKDNTWYTGAKLGWSQYSRE--------------------NQLGAGAFGGYQV--------NPYVGFEMGYDWLGRMPR   52 (156)
T ss_dssp             CCCSSEEEEEEEEEEETTCCS--------------------SCCEEEEEEEEEC--------SSSEEEEEEEEEECSSSS
T ss_pred             CCCCCCEEEEEEEEEEEEECC--------------------CCEEEEEEEEEEC--------CCCEEEEEEEEECCCEEE
T ss_conf             974374588878001584067--------------------7517899998722--------555899999962252255


Q ss_pred             ECCCCEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCEECCCCEEECCCCCCCEEEECCCCCCCCEEEEE
Q ss_conf             06541200213665403750577999605776717897622465311003211010355565135411466756325465
Q batch____      1886 RNAGDFNLNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLT 1965 (2003)
Q Consensus      1886 ~ga~~~~L~v~s~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1965 (2003)
                                   +.....-.+.++..+...+.|..-+.+........................+.           ...
T Consensus        53 -------------~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~  108 (156)
T c2jmmA_          53 -------------KAQGVQLTAKLGYPKLGTDDLDIYTRLGGMVWRADTSDKDGNGYISAAEASVS-----------PVF  108 (156)
T ss_dssp             -------------CEEEEEEEEEEEECTTCTTTCEEEEEEEEEEESSBCCCCCSSSCCCCCBCCCC-----------EEE
T ss_pred             -------------EEEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCC-----------CEE
T ss_conf             -------------67753799999982236664478987014589998755126665553201202-----------223


Q ss_pred             EEEEEEEEC-CEEEEEEE---EEEECCCCCCCEEEEEEEECC
Q ss_conf             765687412-40586412---011145744442799975139
Q batch____      1966 SVGVKYSSK-ESSLNLDA---YNWKEDGISDKGVMLNFKKTF 2003 (2003)
Q Consensus      1966 ~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 2003 (2003)
                      ++|++|..+ +.++++++   |+++.+....|-++|-++++|
T Consensus       109 g~G~~y~~~~~~s~~~~~r~~y~~~~~~~d~~~~~~Gl~Y~F  150 (156)
T c2jmmA_         109 AGGVEYVIRRRITPEIATRLEYQWTNNASDNGMLSLGVSYRF  150 (156)
T ss_dssp             EEEEEEECSSSCSSSEEEEEEEEEESSSSCEEEEEEEEEEES
T ss_pred             EEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEC
T ss_conf             432698860332310899999987167667438999999984