116 c3gm8A_ Probab=98.48   E-value=4.7e-05  Score=48.25  Aligned_columns=238  Identities=21%

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE-CCCCCHHHHHH
Q ss_conf             77714308999999998099899931651340427888887999999999999999987986999942-46897789876
Q batch____        66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLS-HFEMPLHLVQQ  144 (479)
Q Consensus        66 a~d~y~~y~eDi~ll~~lG~~~yRfSIsWsRI~P~g~~g~~N~~gi~~Y~~lid~l~~~GI~PivTL~-HfdlP~~L~~~  144 (479)
                      ++-....++.|+++||+||+|+.|+|.     .|..             ..+++.|=+.||-.|.-+. .|..+..-.+.
T Consensus       294 ~a~~~~~~~~~l~~~ke~G~N~iR~~h-----~p~~-------------~~f~d~cDe~GilV~~E~~~~w~~~~~~~~~  355 (770)
T c3gm8A_         294 AAVPDDLLHYRLKLLKDMGCNAIRTSH-----NPFS-------------PAFYNLCDTMGIMVLNEGLDGWNQPKAADDY  355 (770)
T ss_dssp             TCCCHHHHHHHHHHHHHTTCCEEEETT-----SCCC-------------HHHHHHHHHHTCEEEEECCSSSSSCSSTTSG
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECC-----CCCC-------------HHHHHHHHHCCCEEEEECCHHHCCCCCCCCC
T ss_conf             788999999999999984984999348-----8787-------------9998899886959997141110577887777


Q ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHCCC--CCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             077468336999999999999984676--768997047125542000134457887678886664789999999999986
Q batch____       145 YGSWTNRKVVDFFVRFAEVVFERYKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVAS  222 (479)
Q Consensus       145 ~GGw~n~~~v~~F~~Ya~~~~~~fgdr--V~~W~TiNEP~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~l~Ah  222 (479)
                           .+.+.+...+-.+.++++..+.  |=.|..-||..-....                                 ..
T Consensus       356 -----~~~f~~~~~~~~~~~i~r~rNHPSIi~Ws~gNE~~~~~~~---------------------------------~~  397 (770)
T c3gm8A_         356 -----GNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTGATPE---------------------------------IQ  397 (770)
T ss_dssp             -----GGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSSCCHH---------------------------------HH
T ss_pred             -----CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH---------------------------------HH
T ss_conf             -----7889999999999999985799609999503787878899---------------------------------99


Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             99999999828887256774143244479887779999999884853257224152868999887741888888772688
Q batch____       223 ALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLD  302 (479)
Q Consensus       223 a~a~~~~~~~~~~~~vgi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~d~~~~G~yp~~~~~~~~~~~~~~~~~~~~~~  302 (479)
                      ....+++|++.|.-.+....+..                                                         
T Consensus       398 ~~l~~~~~~~DptRpvt~~~~~~---------------------------------------------------------  420 (770)
T c3gm8A_         398 HNLVSLFHQLDPDRPVTQGGTDP---------------------------------------------------------  420 (770)
T ss_dssp             HHHHHHHHHHCTTSCEEEETCCC---------------------------------------------------------
T ss_pred             HHHHHHHHHHCCCCEEEECCCCC---------------------------------------------------------
T ss_conf             99999999858997087135776---------------------------------------------------------


Q ss_pred             HHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCC-CEEEECCCCC
Q ss_conf             984399779998076525741588776555575566888877657788744708999999999998389-8999806877
Q batch____       303 VLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQR-PLFIVENGFG  381 (479)
Q Consensus       303 ~~~~~~~Df~GiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~gl~~~l~~~~~~Y~~-Pi~ITENG~~  381 (479)
                          +..|..++|++                                      .+...-....+..|+. +++++|.+..
T Consensus       421 ----~~~d~~~~~~~--------------------------------------~~~~~~~~~~~~~~p~~~~~~se~~~~  458 (770)
T c3gm8A_         421 ----NYLDIIGFNGN--------------------------------------GEEIGELEHFHKNYPTLCAIATEVPHT  458 (770)
T ss_dssp             ----CCCSEEEECGG--------------------------------------GGSTTHHHHHHHHCTTSEEEESSCCBB
T ss_pred             ----CCCCCCCCCCC--------------------------------------CCCCCHHHHHHHHCCCCEEEEECCCCC
T ss_conf             ----65530133246--------------------------------------763331677887589740685113354


Q ss_pred             CCCCCCCCCCCCCHHHH--------------------------------------HHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             76677854540405899--------------------------------------9999999999999986699878752
Q batch____       382 AYDKVEEDGSINDDYRI--------------------------------------DYLRAHIEEMKKAVTYDGVDLMGYT  423 (479)
Q Consensus       382 ~~~~~~~~~~i~D~~Ri--------------------------------------~yl~~~l~~v~~Ai~~dGv~V~GY~  423 (479)
                      ...............+-                                      .+.........+++. +.-.|.|-+
T Consensus       459 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-~~p~~~G~f  537 (770)
T c3gm8A_         459 YQTRGVYRSQTQWRRRDFPAPWEFKHRVFPIPDLTEKECFPEESDYPYYQSSYDNASVRISARKSWQRTC-SFPWLMGEF  537 (770)
T ss_dssp             CCCTTCCCSSCEEHHHHSCCTTCCGGGSCCCCCSSSSCSCGGGGGCTTCCCSSSCEESSCCHHHHHHHHH-HCTTEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEE
T ss_conf             2011112345544200001210001233442001233202444566411356677678755999999988-197677541


Q ss_pred             EEHHHC-CEECCCCCCCCCCEEEEECCCCCCCCCCCEEECHHHHHHH
Q ss_conf             131034-8003576623411079953868887887524221999999
Q batch____       424 PWGCID-CVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYK  469 (479)
Q Consensus       424 ~WSl~D-n~EW~~G~y~~rfGL~~VD~~d~~~~~~~R~pK~Sa~~y~  469 (479)
                      .|++.| .-|-....-..-||++          +..|.||+++++||
T Consensus       538 vW~~~Dy~ge~~wp~~~~~~Gii----------D~~g~pK~~yY~y~  574 (770)
T c3gm8A_         538 RWGSFDYLGEAEWPQRCGNFGII----------DIAAIPKDAYFLYQ  574 (770)
T ss_dssp             EBCSBCCBBSSCTTCSBCSCCSB----------CTTSCBCHHHHHHH
T ss_pred             HCCCCHHCCCCCCCCCCCCCCEE----------CCCCCCCHHHHHHH
T ss_conf             00522225899987645434508----------78978365898899


