92 c3civA_ Probab=99.54   E-value=5.4e-11  Score=81.67  Aligned_columns=285  Identities=17%

Q ss_pred             CCCCCEECEECHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf             85988211022123208770889973640011006667666555555566667786667771430899999999809989
Q batch____         8 LPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKC   87 (479)
Q Consensus         8 FP~~FlwG~AtsA~QvEGa~~~dgkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~ll~~lG~~~   87 (479)
                      |--.|+-|+...-++.-+-|..+                                         ..++|+++||++|+|+
T Consensus         4 ~~~~~i~G~~~~~~~~~~~~~~~-----------------------------------------~~~~~l~~l~~~G~N~   42 (316)
T c3civA_           4 FDLGFIRGMTFGFVGQHGTWGTD-----------------------------------------EARASMRALAEQPFNW   42 (316)
T ss_dssp             TTSCCEEEEEESTTCBTTGGGSH-----------------------------------------HHHHHHHHHHHSSCSE
T ss_pred             CCCCCCCCEEECCCCCCCCCCCH-----------------------------------------HHHHHHHHHHHCCCCE
T ss_conf             12422156341441477888836-----------------------------------------8999999999839989


Q ss_pred             EEECCCHHHCCCC------CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCH----------
Q ss_conf             9931651340427------888887999999999999999987986999942468977898760774683----------
Q batch____        88 FRTSIAWTRIFPK------GDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNR----------  151 (479)
Q Consensus        88 yRfSIsWsRI~P~------g~~g~~N~~gi~~Y~~lid~l~~~GI~PivTL~HfdlP~~L~~~~GGw~n~----------  151 (479)
                      .|..+-|.-..|.      +.......++|+   .+|+.+.++||..|+++|-+..+.........+...          
T Consensus        43 vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~i~~A~~~Gl~Vil~~h~~~~~~~w~~~~~~~~~~~~~~~~~~~~  119 (316)
T c3civA_          43 VTLAFAGLMEHPGDPAIAYGPPVTVSDDEIA---SMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAW  119 (316)
T ss_dssp             EEEEEEEEESSTTCCCCBCSTTTBCCHHHHH---HHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSCCTTSSBHHHH
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCHHHHH---HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             9982324777767765444767767978999---9999998689879997235888876555667678601255769999


Q ss_pred             -HHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -3699999999999998467676899704712554200013445788767888666478999999999998699999999
Q batch____       152 -KVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAAR  230 (479)
Q Consensus       152 -~~v~~F~~Ya~~~~~~fgdrV~~W~TiNEP~~~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~l~Aha~a~~~~~  230 (479)
                       +.+..|...-..+....+  +..+...||++.......                               ....+++++|
T Consensus       120 ~~~~~~~~~~~a~~~~~~~--nE~~~~gne~~~~~~~~~-------------------------------~~~~~~~~ir  166 (316)
T c3civA_         120 FGSYSDMMAHYAHVAKRTG--CEMFCVGCEMTTAEPHEA-------------------------------MWRETIARVR  166 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--CSEEEEEESCTTTTTCHH-------------------------------HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCHHHHH-------------------------------HHHHHHHHHH
T ss_conf             9999999987999987419--985850677776001467-------------------------------8999999999


Q ss_pred             HHCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             82888725677414324447988777999999988485325722415286899988774188888877268898439977
Q batch____       231 RINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCD  310 (479)
Q Consensus       231 ~~~~~~~vgi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~d~~~~G~yp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  310 (479)
                      ++.|...+.+.............                                                      .+|
T Consensus       167 ~~dp~~~~~~~~~~~~~~~~~~~------------------------------------------------------~~D  192 (316)
T c3civA_         167 TEYDGLVTYNCNHGREEHVRFWD------------------------------------------------------AVD  192 (316)
T ss_dssp             HHCCSEEEEEEETTCTTTCSCGG------------------------------------------------------GSS
T ss_pred             HHCCCCEEEECCCCCCCCCCCCC------------------------------------------------------CCC
T ss_conf             74699779944688633345333------------------------------------------------------457


Q ss_pred             EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC--
Q ss_conf             999807652574158877655557556688887765778874470899999999999838989998068777667785--
Q batch____       311 YLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEE--  388 (479)
Q Consensus       311 f~GiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~gl~~~l~~~~~~Y~~Pi~ITENG~~~~~~~~~--  388 (479)
                      ++|+++|....                                .......-++.+...|++||+|||.|+........  
T Consensus       193 ~ig~~~Y~~~~--------------------------------~~~~~~~~~~~~~~~~~kPi~i~E~G~~~~~g~~~~~  240 (316)
T c3civA_         193 LISSSAYYPID--------------------------------RWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGSGACP  240 (316)
T ss_dssp             EEEEECCCCGG--------------------------------GHHHHHHHHHHHHHHHTCCEEEEEECCCSBTTGGGST
T ss_pred             EEEEECCCCCC--------------------------------CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
T ss_conf             67631477743--------------------------------0688999865465305885799701452235776676


Q ss_pred             -----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCEECCCCCCCCCCEEEEECCCCCCCCCCCEEECH
Q ss_conf             -----454040589999999999999999866998787521310348003576623411079953868887887524221
Q batch____       389 -----DGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKK  463 (479)
Q Consensus       389 -----~~~i~D~~Ri~yl~~~l~~v~~Ai~~dGv~V~GY~~WSl~Dn~EW~~G~y~~rfGL~~VD~~d~~~~~~~R~pK~  463 (479)
                           .....-.....|+.+.+    .++. +.--+.|.++|+.-+.-.=..|.....              +..+.+|+
T Consensus       241 ~~~~~~~~~~~~~Qa~~~~~~~----~~~~-~~~~~~G~~~W~w~~~~~~~~~~~~d~--------------~f~~~~Kp  301 (316)
T c3civA_         241 WDYRHPGAVCLDEQARFYEAMF----AAMP-DEPWFKGYMLWEWPWKLYPREAASEDG--------------SYCIYGKP  301 (316)
T ss_dssp             TCTTCCCCBCHHHHHHHHHHHH----HHSC-CCTTEEEEEEEEECSSCCCGGGGGGCC--------------SSCCTTSH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHH----HHHH-CCCCEEEEEEEEECCCCCCCCCCCCCC--------------CCEECCCC
T ss_conf             5766644569899999999999----9985-377802599986168788733256488--------------52077621


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999985
Q batch____       464 SFNWYKEVIAS  474 (479)
Q Consensus       464 Sa~~y~~ii~~  474 (479)
                      .+++.++.-+.
T Consensus       302 a~~v~~~~~~~  312 (316)
T c3civA_         302 AEDVVARAFSA  312 (316)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             89999999988


