BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (643 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enter... 1305 0.0 UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 T... 900 0.0 UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fi... 633 e-180 UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Ta... 625 e-177 UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionac... 623 e-177 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 604 e-171 UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Ta... 587 e-166 UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pa... 579 e-163 UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 T... 561 e-158 UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibriona... 510 e-143 UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pas... 498 e-139 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 493 e-138 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 493 e-137 UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 ... 490 e-137 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 489 e-137 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 486 e-135 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 481 e-134 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 479 e-133 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 478 e-133 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 478 e-133 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 476 e-133 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 476 e-133 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 476 e-132 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 475 e-132 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 474 e-132 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 474 e-132 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 470 e-131 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 465 e-129 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 465 e-129 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 464 e-129 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 463 e-129 UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Co... 462 e-128 UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 T... 460 e-128 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 460 e-128 UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase... 456 e-126 UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase... 455 e-126 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 452 e-125 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 452 e-125 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 446 e-123 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 446 e-123 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 446 e-123 UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Ta... 444 e-123 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 442 e-122 UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 T... 441 e-122 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 440 e-122 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 437 e-121 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 436 e-120 UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Ta... 436 e-120 UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 T... 431 e-119 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 431 e-119 UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau sub... 429 e-118 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 428 e-118 UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 T... 427 e-118 UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderi... 426 e-117 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 425 e-117 UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 T... 424 e-117 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 424 e-117 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 424 e-117 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 424 e-117 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 422 e-116 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 422 e-116 UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Cox... 419 e-115 UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 T... 419 e-115 UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Ta... 418 e-115 UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobac... 418 e-115 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 417 e-115 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 415 e-114 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 414 e-114 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 410 e-112 UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA ... 409 e-112 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 409 e-112 UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 T... 409 e-112 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 408 e-112 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 407 e-112 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 407 e-112 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 406 e-111 UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymera... 406 e-111 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 404 e-111 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 402 e-110 UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax... 400 e-109 UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxaloba... 399 e-109 UniRef50_Q89A95 DNA polymerase III subunit gamma n=42 Tax=Entero... 399 e-109 UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacter... 397 e-109 UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsi... 390 e-106 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 389 e-106 UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 T... 385 e-105 UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 ... 384 e-105 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 374 e-102 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 373 e-101 UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetell... 373 e-101 UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter s... 370 e-100 UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiob... 367 e-100 UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella... 362 2e-98 UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 T... 360 1e-97 UniRef50_Q8D230 DnaX protein n=1 Tax=Wigglesworthia glossinidia ... 347 7e-94 UniRef50_A4GJ98 DNA polymerase III subunits gamma/tau n=1 Tax=un... 343 1e-92 UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=be... 337 1e-90 UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymera... 325 5e-87 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 312 2e-83 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 305 3e-81 UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 303 1e-80 UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alp... 303 1e-80 UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 T... 303 1e-80 UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 T... 300 1e-79 UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 ... 297 9e-79 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 296 1e-78 UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits... 296 1e-78 UniRef50_Q057E1 DNA polymerase III, g and t subunits n=1 Tax=Buc... 295 3e-78 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 295 4e-78 UniRef50_A5V2B2 DNA polymerase III, subunits gamma and tau n=1 T... 295 5e-78 UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Ta... 293 9e-78 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 293 1e-77 UniRef50_B5ZIA7 DNA polymerase III, subunits gamma and tau n=10 ... 293 2e-77 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 292 2e-77 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 291 6e-77 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 288 5e-76 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 288 6e-76 UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 T... 287 7e-76 UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Pl... 286 2e-75 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 286 2e-75 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 286 3e-75 UniRef50_Q1GKB7 DNA polymerase III subunits gamma and tau n=4 Ta... 285 3e-75 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 284 9e-75 UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 T... 283 1e-74 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 283 2e-74 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 283 2e-74 UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotro... 282 3e-74 UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n... 282 3e-74 UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaul... 282 3e-74 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 280 1e-73 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 280 1e-73 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 280 2e-73 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 280 2e-73 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 279 2e-73 UniRef50_C3MC56 DNA polymerase III, subunits gamma and tau n=80 ... 279 2e-73 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 279 2e-73 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 279 2e-73 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 279 3e-73 UniRef50_A7ZDZ3 DNA polymerase III subunit tau n=18 Tax=Campylob... 279 3e-73 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 279 3e-73 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 278 4e-73 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 278 5e-73 UniRef50_Q98BM8 DNA polymerase III tau n=2 Tax=Mesorhizobium Rep... 278 5e-73 UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococca... 278 5e-73 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 278 7e-73 UniRef50_Q30Q97 DNA polymerase III, tau subunit n=4 Tax=Epsilonp... 277 8e-73 UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau ... 277 8e-73 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 276 2e-72 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 276 2e-72 UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 T... 276 2e-72 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 276 3e-72 UniRef50_C3XGK3 DNA polymerase III gamma and tau n=1 Tax=Helicob... 276 3e-72 UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Ta... 275 4e-72 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 275 4e-72 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 275 4e-72 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 275 4e-72 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 275 5e-72 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 275 5e-72 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 274 6e-72 UniRef50_A8ERI6 DNA polymerase III, gamma and tau subunits n=1 T... 274 8e-72 UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Ta... 274 9e-72 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 274 9e-72 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 274 1e-71 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 273 1e-71 UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax... 273 1e-71 UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 T... 273 2e-71 UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campyloba... 273 2e-71 UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=The... 273 2e-71 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 273 2e-71 UniRef50_D2R5L2 DNA polymerase III, subunits gamma and tau n=1 T... 272 3e-71 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 272 4e-71 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 271 5e-71 UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=S... 271 5e-71 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 271 5e-71 UniRef50_Q0EXX3 DNA polymerase III subunits gamma and tau n=1 Ta... 271 5e-71 UniRef50_B6AMH2 DNA polymerase III subunit gamma/tau n=2 Tax=Lep... 271 6e-71 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 271 8e-71 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 271 8e-71 UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 T... 270 9e-71 UniRef50_A9AUW8 DNA polymerase III, subunits gamma and tau n=1 T... 270 1e-70 UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 T... 270 1e-70 UniRef50_B0T1T4 DNA polymerase III, subunits gamma and tau n=10 ... 270 1e-70 UniRef50_C6XQ39 DNA polymerase III, subunits gamma and tau n=1 T... 270 1e-70 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 270 1e-70 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 270 1e-70 UniRef50_Q022F8 DNA polymerase III, subunits gamma and tau n=1 T... 270 1e-70 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 270 1e-70 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 270 1e-70 UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 ... 270 2e-70 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 269 2e-70 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 269 3e-70 UniRef50_B9KFI3 DNA polymerase III, gamma and tau subunits n=3 T... 269 3e-70 UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 T... 269 3e-70 UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=L... 269 3e-70 UniRef50_C6HVG4 DNA polymerase III, subunits gamma and tau n=1 T... 268 4e-70 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 268 4e-70 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 268 4e-70 UniRef50_A3VPV6 DNA polymerase III subunits gamma and tau n=1 Ta... 268 5e-70 UniRef50_B2ICM3 DNA polymerase III, subunits gamma and tau n=3 T... 268 5e-70 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 268 6e-70 UniRef50_C6RIQ9 DNA polymerase III subunit gamma/tau n=1 Tax=Cam... 268 7e-70 UniRef50_C6QBE2 DNA polymerase III, subunits gamma and tau n=1 T... 267 1e-69 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 267 1e-69 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 266 2e-69 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 266 2e-69 UniRef50_B9D4Q0 DNA polymerase III subunit gamma/tau n=1 Tax=Cam... 266 2e-69 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 266 3e-69 UniRef50_C1F0Z1 DNA polymerase III, subunits gamma and tau n=1 T... 265 3e-69 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 265 3e-69 UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=L... 265 3e-69 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 265 3e-69 UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 T... 265 5e-69 UniRef50_B1M6N3 DNA polymerase III, subunits gamma and tau n=6 T... 265 5e-69 UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Ta... 265 6e-69 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 264 9e-69 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 264 1e-68 UniRef50_A6GJ36 DNA polymerase III, gamma and tau subunits n=1 T... 263 1e-68 UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunit... 263 1e-68 UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteob... 263 1e-68 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 263 1e-68 UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, puta... 263 2e-68 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 263 2e-68 UniRef50_C5ZV42 DNA polymerase III subunits gamma and tau n=2 Ta... 262 3e-68 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 262 3e-68 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 261 5e-68 UniRef50_Q4FNB0 DNA-directed DNA polymerase gamma/tau subunit n=... 261 6e-68 UniRef50_B2KES0 DNA polymerase III, subunits gamma and tau n=1 T... 261 7e-68 UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Ta... 261 7e-68 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 261 7e-68 UniRef50_C9M8I9 DNA polymerase III gamma and tau subunit n=1 Tax... 260 9e-68 UniRef50_UPI0001977980 DNA polymerase III subunits gamma and tau... 260 1e-67 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 260 1e-67 UniRef50_C8PCQ5 DNA polymerase III n=1 Tax=Lactobacillus iners D... 260 1e-67 UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 T... 259 2e-67 UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 T... 259 2e-67 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 259 2e-67 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 259 2e-67 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 259 3e-67 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 259 3e-67 UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 T... 259 3e-67 UniRef50_Q1JL73 DNA polymerase III subunit gamma/tau n=74 Tax=St... 259 3e-67 UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 T... 259 3e-67 UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 T... 259 3e-67 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 258 5e-67 UniRef50_B1C8Q2 Putative uncharacterized protein n=1 Tax=Anaerof... 258 5e-67 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 258 5e-67 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 258 7e-67 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 258 7e-67 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 257 9e-67 UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau... 257 9e-67 >UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enterobacteriaceae RepID=DPO3X_ECOLI Length = 643 Score = 1305 bits (3378), Expect = 0.0, Method: Compositional matrix adjust. Identities = 643/643 (100%), Positives = 643/643 (100%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM Sbjct: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA Sbjct: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH Sbjct: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA Sbjct: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA Sbjct: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL Sbjct: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI Sbjct: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 >UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 Tax=Enterobacteriaceae RepID=D0ZED4_EDWTE Length = 689 Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/655 (70%), Positives = 530/655 (80%), Gaps = 15/655 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 38 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 97 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDL+EIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 98 GLNCETGITATPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF 157 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQFHL+ALD Sbjct: 158 KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDH 217 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR QLE I + E + EPRALQLLARAAEGS+RDALSLTDQAIA G GQ++ AVS M Sbjct: 218 EQIRAQLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLTDQAIAMGQGQITADAVSQM 277 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDD+Q L+L+EA+ A+G VMA + +AA RG++WE LLVEML LLHR+AM+QL P+ Sbjct: 278 LGTLDDEQPLALIEALTAADGTLVMARVEQAAGRGVDWENLLVEMLALLHRVAMLQLLPS 337 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + AA+E R+RELAR +PP D+QL+YQ LL GRKEL +APDRRMGVEMTLLRALAFH Sbjct: 338 ALDSQFAAVEPRLRELARMLPPADLQLFYQILLNGRKELAFAPDRRMGVEMTLLRALAFH 397 Query: 361 PRM----PLPEPEVPRQSFAPVAPTAVM------TPTQVPPQPQSAPQQAPTVPLPETTS 410 P+ P P P + P P V +P VPP + PQ A V PE+T+ Sbjct: 398 PKAVIAEPSPAPSAAQGGDIPAVPATVAQRVAPPSPATVPPTVSAPPQAASAV--PESTA 455 Query: 411 QVLAARQQL-QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 Q+L AR +L Q+ G ++ KKSEPAA RA+P ++ ALERLAS+++R Q + + E+A Sbjct: 456 QLLQARSRLRQKAAGGSEPKKSEPAAPQRAQPASS-ALERLASISERGQQKIASAEQEQA 514 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 +KEAYRWKA +++K TPKAL+ ALEHEKTPELAA LA E++ RD WA ++SQ Sbjct: 515 STRKEAYRWKAQNRPVEEKAPKTTPKALRSALEHEKTPELAAHLAQESLTRDAWAQELSQ 574 Query: 530 LSLPKLVEQVALNAWKEES-DNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 L LPKLV+Q+ALNA++E + + +V LHLRS+QRHLN+ A+Q L +ALS G V L+I Sbjct: 575 LRLPKLVQQLALNAFREPAPEGSVLLHLRSAQRHLNSASARQTLEQALSDHYGHPVALSI 634 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 VEDD+P RTPLEWRQAIYEE+LAQAR SI AD NIQTLRR FDAELDEESIRP+ Sbjct: 635 VEDDDPQRRTPLEWRQAIYEERLAQARASIAADGNIQTLRRLFDAELDEESIRPV 689 >UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fischeri RepID=B5FFM6_VIBFM Length = 709 Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust. Identities = 353/712 (49%), Positives = 452/712 (63%), Gaps = 72/712 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ E RAL L+A AA+GS+RDALSLTDQAIA G+G V+ + VSAM Sbjct: 181 DQIHEQLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M +N+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ L+ + P ++QL+YQ +L RK+LP AP+ R G EM LLR +AF Sbjct: 301 TLDKTQPDAE-RIELLSTQLSPQEVQLFYQIVLQSRKDLPLAPNERTGAEMMLLRMVAFR 359 Query: 361 P-----------RMPLPEPE----VPR-QSFAPVAPTAV-------MT------------ 385 P +P EP+ PR Q AP P V MT Sbjct: 360 PVHAQALEAQPIAVPSTEPQAINTAPRVQQQAPSVPANVAPQAQRPMTSQQRPTMQQQTQ 419 Query: 386 ----PTQVPP----QP----------------QSAPQQAPTV--PLPET---TSQVLAAR 416 P VPP QP APQQ+ + P+ ET S +L R Sbjct: 420 QGHAPANVPPMHSEQPPMYDAPPMGTPSGESASQAPQQSSSAQPPMQETPAPRSGLLGVR 479 Query: 417 QQLQRVQG--ATKAKKSEPAAATRARPVNNAALERLAS---VTDRVQARPVPSALEKAPA 471 QL+ + S+ A+A + ++ LER+A + R Q + ++ + Sbjct: 480 NQLRSAKNNLTNTGTGSKKASAASDKKKTSSVLERIAEKQHLAPRAQVSQIGNSATQEKK 539 Query: 472 KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 +E YRWK+T P M++ TP LK+ALEHEKTPE+ L E+ ++D W+A L+ Sbjct: 540 PEEPYRWKSTQPEMKKVVSDVTPTKLKQALEHEKTPEMVKLLVEESSKQDTWSALAMSLT 599 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 LPKLV+Q+ LN+ E DN + LHLR++Q HLN A + + +AL+ V +TI D Sbjct: 600 LPKLVQQLVLNSAFVEQDNQIKLHLRAAQSHLNGDKANELITQALTQTLNREVTITI--D 657 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + TPLE R+ +Y+ KL A +S+ D ++ + F AE+D+ES+RPI Sbjct: 658 ISDEGTTPLELREQMYQTKLQTAYQSLQQDPHVNFFIQRFGAEMDQESVRPI 709 >UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Tax=Actinobacillus minor RepID=C5S1I5_9PAST Length = 698 Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust. Identities = 343/703 (48%), Positives = 451/703 (64%), Gaps = 75/703 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGITATPCGECANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI H LE IL E I +E A++ LA+AAEGS+RD+LSLTDQAIA + V+ AVS M Sbjct: 181 TQIAHHLEFILKAEQIPYETAAIEKLAKAAEGSIRDSLSLTDQAIAVTNANVTLSAVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L L+ A+ A+GE+VMA+I A +G++W LL ++ +LH+IAM+QL + Sbjct: 241 LGLIDDHQPLELIMALANADGEKVMAVIQNVAEKGVDWNQLLNDVAEVLHQIAMLQLVKS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +AI LA+ + P DIQ +YQ +L+G+KELP AP++R GVEMT LRALAFH Sbjct: 301 A-EQEESAIHF----LAKQMAPEDIQFFYQVILMGKKELPLAPEQRSGVEMTFLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQP--------------------------- 393 P+ E + AP + P Q+ QP Sbjct: 356 PK----RTEAINLNVAPQQTQNSVAPQQIVQQPTRTAQDNIAQLRERLAKESSSTQAVQN 411 Query: 394 --------QSAPQQAPTVPLPETTSQ----------VLAARQQLQRVQG---ATKAKKSE 432 Q+A +P V P +T + AR+QLQ Q T+ KK E Sbjct: 412 NEHFAKVSQNATAYSPNVNAPTSTETPTQGVSAALVAMQARKQLQETQAQLDQTEKKKPE 471 Query: 433 PA-----------AATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 A + R +N A ++ + ++ +PV +A P E YRW Sbjct: 472 LVIPKPINTNKQPANLQERFMNLAVAQQQQTTREKTVTKPVATA---KPTNDEDYRWTWL 528 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL 541 P ++ ++ A P +K+A+ E+TPEL K + + E+D W V++L+L L Q+AL Sbjct: 529 NPELENQDESAKPSDIKRAILQERTPELVEKTISLSCEQDKWCKLVNELALGGLSRQLAL 588 Query: 542 NAWKEES-DNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 N++ ++ +N + L L+ + HL+N ++Q LA AL + KG T +LT+ E + +TPL Sbjct: 589 NSYLSDTQNNELHLVLKPAMAHLDNLESRQSLATAL-LEKGFTYQLTLGE--SAENKTPL 645 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E R+AI+E+ A+ ++ +D + LR+ FDAE+DE +IR + Sbjct: 646 EIRRAIFEQLTVDAKNALFSDEKLMLLRQAFDAEIDESTIRAV 688 >UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionaceae RepID=B6EJ42_ALISL Length = 714 Score = 623 bits (1606), Expect = e-177, Method: Compositional matrix adjust. Identities = 343/717 (47%), Positives = 446/717 (62%), Gaps = 77/717 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKF+LATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ + RAL L+A AA+GS+RDALSLTDQAIA G+G V+ VS M Sbjct: 181 DQIHAQLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAIALGNGNVTADIVSMM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M+ IN+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ L+ + P ++QL+YQ L R +LP AP + GVEM LLR +AF Sbjct: 301 TLDKTQPDAE-RIELLSGQLSPQEVQLFYQIALQSRNDLPLAPTEKTGVEMMLLRMVAFR 359 Query: 361 P-------RMPL------------------------------PEPEVP------------ 371 P +P+ P EVP Sbjct: 360 PVHAQAIEALPIAVPSMEPAAVNVAPQQPAPASRVQQVIASAPNAEVPVAPKPMQPQAVS 419 Query: 372 -----------RQSFAPVAPTAVMTPT-QVPP-----QPQSAP-QQAPTVPLPETTSQVL 413 + S AP+ T P PP Q SAP Q P P+ S +L Sbjct: 420 QTVYSPVSNSQQSSSAPLDSTEAQPPVYDAPPMGESSQSDSAPVQNIPQEPIATPRSGLL 479 Query: 414 AARQQLQ----RVQGATKAKKSEPAAATRARPVNNAALERLAS---VTDRVQARPVPSAL 466 R QL+ + T + +A + ++ LER+A + R Q + +++ Sbjct: 480 GVRNQLRSAKNNLSNTTTGTSPKKGSAASDKKKTSSVLERIAEKQHLAPRTQVSQLGTSV 539 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 + +E YRWKA+ P +++ TP LK+ALEHEKTPE+ +L E +++D W+A Sbjct: 540 SQEKKPEEPYRWKASQPEVKKVVSDITPTKLKQALEHEKTPEMVQELVDETVKQDTWSAL 599 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 L+LPKLV+Q+ LN+ EE D+ V LHLRS+Q HL N A + +++ALS ++L Sbjct: 600 AMSLALPKLVQQLVLNSSFEEHDDQVSLHLRSAQSHLINDKAHELVSQALSSALNKEIKL 659 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I D + +PLE R+ +Y+ KL A +S+ D ++ + + AE+D+ES+RPI Sbjct: 660 NI--DISAEGTSPLELREQMYQTKLQTAYQSLQQDPHVNFFMQRYGAEIDQESVRPI 714 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 604 bits (1558), Expect = e-171, Method: Compositional matrix adjust. Identities = 338/705 (47%), Positives = 444/705 (62%), Gaps = 68/705 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F V+GQEH+LTALANGL R+HHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQNFHQVIGQEHILTALANGLKENRLHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE G F+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCIHGVTAEPCGECEHCKAIENGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L +IL +E I EP AL +A+AA+GS+RD+LSLTDQAIA + + V+ M Sbjct: 181 QQIAQHLANILTQEKIPFEPTALGKIAKAAQGSVRDSLSLTDQAIAMSNADIRVDVVNIM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+Q + ++ A+ + NGE++M I A G +W+ LL+E+ LH+IAM+QL P Sbjct: 241 LGLLDDNQPIEILYALHQGNGEKLMQGIQAVADNGADWDELLIEVGEALHQIAMLQLLPN 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + E ++ LA+ I P +IQ +YQ + +GRKEL +AP+RR+G EMTLLRALAFH Sbjct: 301 RIDE-----ESQLGFLAKHISPENIQFFYQIVTMGRKELAFAPNRRIGAEMTLLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTP------------TQVPPQPQ-----SAPQ--QAP 401 P+ EP Q + V +A P ++P Q + PQ Q+P Sbjct: 356 PKFSRAEP-AEHQVNSTVQDSARAHPEKESAVKKTINLVEMPVYNQHLRVSATPQREQSP 414 Query: 402 TVPLP-ETTSQVLAARQQLQRVQGATKAKKS----------EPAAATRARPV-------- 442 L ++TS L A Q++R++ + ++ S +PA PV Sbjct: 415 PGNLSGKSTSNALNALAQIERLRASVRSAASTEEKTGFEQPQPAVQAHELPVVSMPQKER 474 Query: 443 -NNAALERLASVTDRVQARPVPSALEKAPAK--------------------KEAYRWKAT 481 ++RLAS+ + Q P+ K+ +K E YRW+ Sbjct: 475 PQTDLIDRLASLAQQAQDNLNPAVKRKSVSKPVSDSTQETENEDDSDDANLAETYRWEWI 534 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP--KLVEQV 539 P M + E V P +K+A+ EKTPEL K+ A A ERD W V L L KLV+Q+ Sbjct: 535 NPEMAEAENVIRPSEIKQAILKEKTPELVKKVIALAEERDDWTKTVEHLGLDHLKLVKQI 594 Query: 540 ALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 ALN+ ++D+ + L LRS+Q+HL A + L AL + G + L I +D+ T Sbjct: 595 ALNSVILAQTDSEIVLGLRSNQKHLQRESAIEALQAALKVYYGKDLRLKIELNDDERRPT 654 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 PL++R+ IY E +AR+ + AD ++ L++ FDA LD +SIRP+ Sbjct: 655 PLDYRRQIYHELSERARQDLQADKKVKLLQQAFDAHLDLDSIRPV 699 >UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Tax=Pasteurellaceae RepID=B8F323_HAEPS Length = 670 Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust. Identities = 330/678 (48%), Positives = 439/678 (64%), Gaps = 45/678 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGI+A PCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGISADPCGQCANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+AL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ LE IL +E I +E AL LA+AA+GS+RDALSLTDQAIA + ++ VS M Sbjct: 181 SQIQQHLEFILTQEQIPYELSALAKLAKAAQGSIRDALSLTDQAIAVSNVNITLPIVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L LV+A+ A+GE+ MA+I A +G++W+ L + LH+IAM+QL Sbjct: 241 LGLIDDHQPLELVQALANADGEKAMAVIQSVAEKGVDWQQLFSDTAETLHQIAMLQLLKH 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A E + LA+ I P D+Q +YQ +L G+KELP+AP++R GVEMT+LRALAFH Sbjct: 301 AHQE-----ETPLHFLAKQISPEDVQFFYQVMLTGKKELPFAPEQRSGVEMTILRALAFH 355 Query: 361 PR------------------------MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA 396 P+ L E +Q+ A T + Q + S Sbjct: 356 PKNMATTTTVATPTTPVAPVQSPNSISQLRERLAQQQNSAQTVTTQAVNTEQHFAKNLSQ 415 Query: 397 PQQAPTVPLPETTS---QVLAARQQLQ-RVQGATKAKKSEPAAATRARPVNNAALERLAS 452 P +PT E+ S + + ARQQL+ + + + KKS+ + VN ++++ Sbjct: 416 PTASPTETNTESISPALKAMQARQQLKAKQEQQDEKKKSDLTPIQPPKTVNKKSVQQ--G 473 Query: 453 VTDRVQARPVPSALEKAPAKK------EAYRWKATTPVMQQKEVVATPKALKKALEHEKT 506 + + V A+ +E+ P K E YRW P ++ +E P +K+A+ E+T Sbjct: 474 LMNLVTAQDQRQQIEETPQKNIASQNDEDYRWTWLNPELENQEEAPKPSEIKQAILQERT 533 Query: 507 PELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRS-SQRHLNN 565 PEL K ERD W+ V+ L L + Q+ALN++ E +N L + + + HLN+ Sbjct: 534 PELVKKTIELGCERDKWSRIVNSLKLGGVSRQLALNSYLESHNNNHLLLVLNPTMAHLNS 593 Query: 566 RGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 625 A Q L ALS +G + E+ I E D +TPLE R+ I+E+ +A++++ AD ++ Sbjct: 594 NEATQSLYNALSQ-QGFSSEMRIGESDE--FQTPLEIRRVIFEQLTQEAKQALQADKKLK 650 Query: 626 TLRRFFDAELDEESIRPI 643 L++ FDA++DE +IR + Sbjct: 651 LLQQAFDAQMDEATIRAV 668 >UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pasteurellaceae RepID=DPO3X_HAEIN Length = 688 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 325/694 (46%), Positives = 433/694 (62%), Gaps = 57/694 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQEH++TALANGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TATPCG C+NC+ IEQG F+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCVHGVTATPCGECENCKAIEQGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLKALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L HIL +E+I E AL LA+AA+GS+RD+LSLTDQAIA GD QV+ VS M Sbjct: 181 TQISQHLAHILTQENIPFEDPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+ ++ ++ A+ + NGE +M + A +W+ LL E LH+IA++QL P Sbjct: 241 LGLLDDNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ LA+ I P ++Q +YQ ++ GRK+L AP+RR+G EMTLLRALAFH Sbjct: 301 KSSDNNEHFSF----LAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLLRALAFH 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPT----QVPPQPQSAPQQAPTVPLPETTS------ 410 P+ P+ P + + + T VP QS + A + P TS Sbjct: 357 PKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSI-KSAYSQAKPNKTSIPNLAS 415 Query: 411 -QVLAARQQLQRVQGATKAKKSEPAAATRARPVNN-------AALERLASVTDRVQARPV 462 L A + L +++ + + + A + +++ + +++ ++ R P Sbjct: 416 LSALDALEHLTQLENQERQEHKAESLAVVSETLHHIQELDEEKSHKKMTALPVREMTEPK 475 Query: 463 PSALEK---------APAKK-----------------------EAYRWKATTPVMQQKEV 490 P +EK AP K + YRW+ + P + + + Sbjct: 476 PKHIEKPTLPSNAAQAPQKNSTEENSSDDNVEIAQDEQEILSADTYRWEWSNPELAKADT 535 Query: 491 VATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW-KEESD 549 P +K+A+ + TPEL K+ + ++D WA V + L +++ALN + + ++D Sbjct: 536 GVCPSDIKQAILKDITPELRLKIITQTQQQDQWADIVERSGLTGFSKELALNCFLQSKTD 595 Query: 550 NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEE 609 + + L L S + HL + + LAEALS L+G + LTI DD+ V TP+E+R+ IY+ Sbjct: 596 DEINLGLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDS-NVTTPIEYRRNIYQA 654 Query: 610 KLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +A+ + D+ +Q L FDA+LD ESIRP+ Sbjct: 655 LREKAQNELQKDSKLQILLNEFDAKLDVESIRPV 688 >UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 Tax=Candidatus Blochmannia RepID=Q493A4_BLOPB Length = 698 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 284/689 (41%), Positives = 421/689 (61%), Gaps = 48/689 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+D+VGQEH++ A+ + SL +IHHAY+ SGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPKKFSDIVGQEHIIQAITHTFSLNKIHHAYILSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G T T CG C+NC++IE G F+DLIEIDAASRTKVEDTR+ LDNVQY P+RGRF Sbjct: 61 GLNCEQGTTYTMCGQCNNCKDIELGCFIDLIEIDAASRTKVEDTREFLDNVQYMPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKF+L TT+ QKLP TILSRCLQF+LK L++ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPTHVKFILVTTEYQKLPETILSRCLQFYLKPLNI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +I ++E+I E AL+ LA A++GS+RDALSL +QAI G+ +++ ++ M Sbjct: 181 SQIINQLTYIFHKENINIETSALESLAYASKGSMRDALSLAEQAIVLGNNEITNNVINNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + L L+E++++ + +M I G+ W+ + E+L +L +IA+ Q Sbjct: 241 FGISNIEHPLCLIESLIDEDIHNIMHQIENLTVLGVHWDYVFNEILTILQKIAIGQFLSN 300 Query: 301 AL----GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 ++ N I RMR L+ I P ++QLYYQ L+GR+ELPYAP RMG+EMT+LRA Sbjct: 301 SVQKEDNNVTQHINQRMRRLSNRITPENVQLYYQIFLLGRRELPYAPSHRMGIEMTMLRA 360 Query: 357 LAFHPRMPLPEPE---------VPRQSFAPVAPTAVMTPT---------QVPPQPQSAPQ 398 LAF P + + + + ++S + T Q Q + Sbjct: 361 LAFRPDVDIANKKNGNGDDNDHILKKSVCSNNNVEINTNDTQHIATDLFQKKNHNQGSKN 420 Query: 399 QAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALE---RLASVTD 455 T L +T + +L ++ + TK K S+ ++ R + + LE +L + Sbjct: 421 VLNTEKLKKTNNILLLNFKKSELNSDNTKPKISKSVSSRDTRDITSTILEARSKLLQYKE 480 Query: 456 RVQ--------------ARPVPSALEKAPA------KKEAYRWKATTPVMQQKEVVATPK 495 R + + + LE+ + K + R++ + + Sbjct: 481 RDKLNVIEKKSNLTLESQKKIKDILERFASINTIILKNSSDRFEKINKDLSGYLEFSNNS 540 Query: 496 ALKKAL--EHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAV 552 K+ L H+ P+ ++ +AI + W +Q+ +LSLPKL +++ +N+WKE+ S + + Sbjct: 541 NNKENLHRNHQNMPDFIKEILQKAINNNLWISQIYRLSLPKLAKKLVMNSWKEKISSDEI 600 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 CLH+RS +HLN+ + + ++LS G ++L I +DDN A++TP+E +Y+EK++ Sbjct: 601 CLHVRSDYQHLNSTELRNIIQKSLSNNIGIAIKLHIKKDDNYAIKTPMEHLYTLYKEKIS 660 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIR 641 ++ +D ++ ++ FFDAE+DE I+ Sbjct: 661 LIKKEFSSDPYVKMIKSFFDAEIDENDIQ 689 >UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibrionales RepID=B7VL96_VIBSL Length = 752 Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust. Identities = 254/414 (61%), Positives = 305/414 (73%), Gaps = 4/414 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP F +VVGQ HVLTAL N LS R+HHAYLFSGTRGVGKT+I RL AK Sbjct: 1 MSYLALARKWRPTKFKEVVGQAHVLTALENALSQNRLHHAYLFSGTRGVGKTTIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGIT+TPCG C C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGITSTPCGECATCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+HIL +E++ EPRAL ++A AA+GS+RDALSL+DQAIA G+G V T V+ M Sbjct: 181 DNIHEQLDHILEQENVTSEPRALGMIAHAADGSMRDALSLSDQAIALGNGNVVTDTVAHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ L+EA+ ++ MA I A G+EW+ LL ++ LHR+AM Q P+ Sbjct: 241 LGTLDTDQAIHLLEAISSKQPQQAMACIQALAENGVEWDGLLSQLATQLHRLAMYQALPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ +++T+ P DIQLYYQ +L GR++LP +P R+G+EM +LR LAF Sbjct: 301 TLDKAQPDAE-RLELMSKTLSPQDIQLYYQIVLKGRQDLPLSPTARVGIEMVVLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 P + QS +P A P Q Q Q+ + P+PE QV A Sbjct: 360 PAEQTVATAISTQSTSPAPAPAAQNPVQNQVQ---GVAQSMSQPVPEPRQQVQA 410 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/262 (37%), Positives = 144/262 (54%), Gaps = 18/262 (6%) Query: 389 VPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ---RVQGATKAKKSEPAAATRARPVNNA 445 PP Q P +A TS V R QL+ R AT K S P A +A + Sbjct: 502 TPPVSQEQPARA--------TSPVSGLRHQLRSQRRSSAATDNKGSTPKKA-KATSAKTS 552 Query: 446 ALERLA---SVTDRVQ-ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKAL 501 L+R+A ++RV A S+ EK E YRWK + PV+++ TP +K+AL Sbjct: 553 VLDRVAQQHGGSERVSPASLSASSTEKVTNDNEPYRWKPSKPVVKEVSKELTPTQIKRAL 612 Query: 502 EHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQR 561 EH KTPE+ KL E+I +D W+A + +L KLVEQ+ALN+ ++D ++ L LR+SQ Sbjct: 613 EHIKTPEMVDKLLQESIAQDEWSATIQKLETAKLVEQLALNSVFAKNDTSITLTLRASQA 672 Query: 562 HLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIAD 621 HLN AQ +L ++L+ + G L++ + TPLE R+ +Y+ KL A ++ D Sbjct: 673 HLNTDRAQSELLQSLNTVLGEECHLSV--EIGEGGETPLELRERLYQGKLKDAFTALEND 730 Query: 622 NNIQTLRRFFDAELDEESIRPI 643 N+Q + R F AELD +S+RPI Sbjct: 731 ANVQFIERRFAAELDRDSVRPI 752 >UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPQ1_9PAST Length = 741 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 230/363 (63%), Positives = 286/363 (78%), Gaps = 4/363 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQ H+L AL+NGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQSHILIALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCVNGVTAEPCGECEHCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI LE IL +E I + AL+ LA+AA+GS+RD+LSL DQAIA +G ++ V+ M Sbjct: 181 TQIAQHLEFILKQESIPFDFLALEKLAKAAQGSIRDSLSLADQAIAMSNGNITLNVVNEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+QA+ ++ + + NGE +M +I A +G +W+ L ++ LH+IA+ QL P Sbjct: 241 LGLLDDNQAIDILYTLQQGNGENMMKIIQAIAEKGSDWDLFLRDIAEKLHQIAVKQLLPK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ LA I P D+Q +YQ ++ GRKEL ++P R+GVEMTLLRALAFH Sbjct: 301 DRLDESNQLDF----LATLITPDDLQFFYQVIVAGRKELAFSPTPRIGVEMTLLRALAFH 356 Query: 361 PRM 363 P++ Sbjct: 357 PKL 359 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 2/171 (1%) Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 E YRW+ + P + + + TP LK++LE + TPEL K+ + + D W V L + Sbjct: 572 ETYRWEWSNPELAKMQDGPTPSELKQSLEKDITPELREKVILLSRKEDVWTNIVESLDIN 631 Query: 534 KLVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 L +++ALN A E+S V L + + + HL R + L E L+ +EL I D Sbjct: 632 NLTKELALNCALIEKSGGRVTLGIHTEKSHLEKRTFVKNLTEELAKYYAEQIELEIRVSD 691 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +TP ++ + Y+ +A+E + D +Q F+ ELD S++P+ Sbjct: 692 E-ITQTPTDFYRQTYKMLREKAKEDLQQDKKLQLFLTEFNGELDLASVKPV 741 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust. Identities = 295/691 (42%), Positives = 404/691 (58%), Gaps = 55/691 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF +++GQEHVL AL N L GR+HHAYLF+GTRGVGKTSIAR+LAK Sbjct: 1 MSYQVLARKWRPRTFREMIGQEHVLRALINALDHGRLHHAYLFTGTRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+++ PCG C C EI +GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCETGVSSEPCGECSACVEISEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 KIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L HIL +E I E AL LAR+A+GS+RDALSLTDQ+I+ G G+VS V++M Sbjct: 181 ERIVGHLSHILEKEVIPFEESALWQLARSADGSMRDALSLTDQSISFGGGKVSEDEVASM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +LV A++ +G +++ + + A +++ L +++ LLHRIA+ Q P Sbjct: 241 LGTIDHKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITLLHRIAIAQALPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N ++ E A + P D+QL+YQT LIGR++L +PD R G EMTLLR LAF Sbjct: 301 ALDNSYGD-RTQILEFASKLAPEDVQLFYQTALIGRRDLSLSPDPRSGFEMTLLRMLAFK 359 Query: 361 PRMPLPEPEVPRQSF------APVAPTAVMT---------------PTQVPPQP-QSAPQ 398 P+ +VP Q AP + + V + + V P P Q+AP+ Sbjct: 360 PQG---VADVPTQRLQAQPASAPASSSDVASVAAPAAPTAQAAPQPSSNVEPAPAQAAPE 416 Query: 399 QA-PTVPLPETTSQVLAARQQL----------------QRVQGATKAKKSEPAAATRARP 441 Q P+ P + Q A + + Q K ++EP A P Sbjct: 417 QTEPSPPAQTSPPQQNVAPNTVEDNSPPADYYDNMPPYEEAQEPVKKPQAEPQQAQAEVP 476 Query: 442 VNNAA----LERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL 497 + A + + + + QA P APAK A + + KE ++ P Sbjct: 477 ASEPAPLGPMHTVVTAAESTQAVAEPEVNTSAPAKTPADALREQVKAIVGKEGISAPPKP 536 Query: 498 KKALEH------EKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDN 550 + L++ P + ++ E + W + +QL++ +++ A N DN Sbjct: 537 AQQLKNTPAAPINAAPVVTTPISLEELTPSHWVSVYNQLNVKGILQSTAANTVLIGREDN 596 Query: 551 AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA-VRTPLEWRQAIYEE 609 + L + L + +L+ LS G ++ I + P + TP + I +E Sbjct: 597 HLDFALDEQKSSLFDPSHSDRLSALLSDYFGVPIKAAIHLQNLPGDLETPAAYAIRIDQE 656 Query: 610 KLAQARESIIADNNIQTLRRFFDAELDEESI 640 K A +++ D +QTL++ F+A L EE++ Sbjct: 657 KRVAAIQNMYDDPVVQTLQQQFNATLVEETV 687 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 314/754 (41%), Positives = 399/754 (52%), Gaps = 136/754 (18%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IAR++AK Sbjct: 1 MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+TPCG C C+EI++GRFVDLIEIDAASRTKVEDTR+LLDNVQYAP+RGRF Sbjct: 61 CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP +VKF+LATTDPQKLP TILSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L H+L E++ E AL LL RAA+GS+RDA+SLTDQAIA G+G+V V AM Sbjct: 181 ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD Q ++ A++E + V+ + A +G +W +L E+L +LHR+A+ Q P Sbjct: 241 LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N + R+ LA+ +P D+Q YYQ LIGR++LP APD R G EM LLR LAF Sbjct: 301 GVDNGHGDRD-RVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAP----------------------VAPTAVMTPTQVPP------- 391 P + PRQ P VAP P P Sbjct: 360 PADNY---DAPRQPLKPVGISQATVDSRKAVADATPVASVAPAVSTAPVMAAPDPAFEAL 416 Query: 392 ------------------QPQSAPQQAP------TVPLPETTSQVLAARQQLQRVQGATK 427 QP+S PQ P +P E S V A K Sbjct: 417 PPAAAPMPTAAVRAEPAAQPESQPQAQPEPVEEVDLPWNEPKSPV------------AEK 464 Query: 428 AKKSEPAAATRARPVNNAALERLASVTDRV------QARPVPSALEKAPAKKEAYRWKAT 481 +S P T A PV LE ++ D A PVP A E PA+ A + Sbjct: 465 NAESAPDTGTVAEPVAEPVLETVSEQPDLTPMPTPAPASPVPDAPEAEPAQPVAE--QQV 522 Query: 482 TPVM-----QQKEVVATPKALKK---------------------------------ALEH 503 TP M + P ++ L H Sbjct: 523 TPAMLEAIPDSAYLSMNPDSMSSNSGPMGRDDEPPADDDYVEPDIDIDPASYSYLDELAH 582 Query: 504 EKTPELAA-------------KLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESD- 549 E EL A LAA+ W +L + + +A N D Sbjct: 583 ESVVELEAVEPEPAPAAKPATGLAAD------WLEVFPKLPISGMTGSIAANCTLMAVDG 636 Query: 550 NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEE 609 ++ LHL + L N Q++L +AL+ G T+ L+I E P TP + + E Sbjct: 637 DSWLLHLDPAHSALFNSTQQRRLNDALNQYHGRTINLSI-ELIKPEQETPAQAASRLRAE 695 Query: 610 KLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + QA SI AD IQ + + F A + E++I+P+ Sbjct: 696 RQRQAEASIQADPYIQQMLQQFGAVIREDTIQPV 729 >UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 Tax=Vibrio RepID=Q7MIV2_VIBVY Length = 730 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 239/364 (65%), Positives = 280/364 (76%), Gaps = 7/364 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+ F +VVGQ HVLTAL N L R+HHAYLFSGTRGVGKTSI RL AK Sbjct: 1 MSYLALARKWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCG CD CREIE+GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 ALNCEKGITSAPCGQCDTCREIEEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+ IL +E + + RAL ++A AA+GS+RDALSLTDQAIA G+GQ+ T VS M Sbjct: 181 DAIHQQLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D DQA+ L+EA+ + M I + A G EW+ LL ++ LHRIAM QL P+ Sbjct: 241 LGTIDTDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPS 300 Query: 301 ALGN---DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +L D IEL L+R + P D+QL+YQ L GR +L AP+ R+G+EM +LR + Sbjct: 301 SLDKAQPDAEKIEL----LSRALSPQDVQLFYQIALKGRDDLSLAPNGRIGMEMIVLRMM 356 Query: 358 AFHP 361 AF P Sbjct: 357 AFRP 360 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 10/231 (4%) Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA---SVTDRVQARPVPSALEKAPAK 472 R Q Q + +KKS+ A+A + + L+R+A + +V R + E + Sbjct: 507 RSQRQGLAQNGGSKKSKAASAEK-----ESVLDRVAQKQATAAQVSPRQSLAPSEPEVKE 561 Query: 473 KEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSL 532 E Y+W+ + PV+Q K TP +K+ALEHEKTPE+A KL AE++E+ WA ++QL Sbjct: 562 DEPYQWRPSQPVVQSKSKELTPTEIKRALEHEKTPEMAEKLVAESLEQSEWAKLITQLET 621 Query: 533 PKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 KLVEQ+ALN+ + + + L LRS Q+HLN AQ++L AL+ G T L++ + Sbjct: 622 AKLVEQLALNSAFNKEGSTIALTLRSHQQHLNTDKAQKELLSALNETLGETCHLSV--EV 679 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 TPLE R+ +Y++KL QA S+ D ++Q + R F AELD +S+RP+ Sbjct: 680 GGQGETPLELRERLYQQKLQQAFTSLENDTHVQFILRRFSAELDRDSVRPV 730 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust. Identities = 249/404 (61%), Positives = 298/404 (73%), Gaps = 8/404 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F VVGQ+HVLTAL N L R+HHAYL SGTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPHNFQQVVGQQHVLTALVNALEQDRLHHAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+TPCG C C EI+QG +VDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEKGITSTPCGECSTCVEIDQGCYVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRCLQFHLK L Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCLQFHLKCLTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL+ EH +E AL +A+AA+GS+RDALSLTDQA++ G G+V Q V M Sbjct: 181 EQISQQLVHILSREHCQYELSALNSIAKAADGSMRDALSLTDQALSHGAGEVLYQTVLDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L L+ +V + + MA I E ++ G +++ L VE+ LLHRIAM Q+ P+ Sbjct: 241 LGTLDHSHMLQLLRLIVSGDANKCMAKIAEVSSLGPDFDQLHVELASLLHRIAMAQILPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ + A +++ L + P D+QLYYQ L GRKELP APD R +EMT+LR LAF Sbjct: 301 SVVDTEHAD--KVKALCDDMSPEDVQLYYQITLTGRKELPLAPDPRSALEMTILRMLAFR 358 Query: 361 P--RMPLPEPEVPRQSFAPVAPTAVMTPTQV-PPQPQSAPQQAP 401 P R+ PE +V + APVA +T T + P Q+ QAP Sbjct: 359 PQGRLQAPERDV---TPAPVAIAPAVTETIIAAPVEQTVVSQAP 399 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 68/125 (54%) Query: 519 ERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSM 578 E DPW ++Q+SL V Q+AL++ E+ + L + QR+ N ++Q+L++AL Sbjct: 690 ENDPWCCYINQMSLGGRVRQLALHSVMEQEPGRITLTMNPDQRYFANDKSRQQLSDALQQ 749 Query: 579 LKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEE 638 + VEL I +N TP + + IY+++LA A +++ D IQ A +D+ Sbjct: 750 VLSEPVELVINFGENLNKSTPAQLEEIIYQQRLANATKNLYDDKYIQFFMNRLGAVIDDS 809 Query: 639 SIRPI 643 SI P+ Sbjct: 810 SIVPL 814 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 306/684 (44%), Positives = 407/684 (59%), Gaps = 48/684 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITATPCG C C EIEQGRFVDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKALSN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL ++L++E + + AL LLAR+A GS+RDALSLTDQAIA G G VS +V M Sbjct: 181 DDITQQLSYVLSQEQVQADSEALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +L+E+++E + E VM ++ + + ++LVE+ LLH++A+VQ P+ Sbjct: 241 LGNVPVADIAALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A N ++ ++ L R +P IQ++Y+T+L GR+E YA D R G+EMTLLR L F Sbjct: 301 A-ANVFENSDV-LKPLLRRMPAELIQVFYRTVLEGRREQAYAIDARSGLEMTLLRLLCFR 358 Query: 361 P----------------RMPLPEPEVPRQ--------SFAPVAPTAVMTPT-----QVPP 391 P MP + P Q S A V P A P P Sbjct: 359 PAEKGDYNITEPDSSAVDMPESKLTAPAQEVTETEAGSVAEVTPQAGPEPQPEAELSEPM 418 Query: 392 QPQSAPQQAP---TVPLPETTSQVLAARQQLQRVQGATKAKK-SEPAAATRARPVNNAAL 447 QP + + P P+ + ++ A K++ EP A A P A Sbjct: 419 QPSYSEHEEPPEFNYSEPDDDAGFYHNDAPPYHMEEAAKSEPVPEPTADQTAEPTPEPAA 478 Query: 448 ERLASVTDRVQARPVPSALEKAP---AKKEAYRWKATTPVMQQKEVVATPKAL------K 498 + + V D ++ R A +K P K + + ++PV A P+A Sbjct: 479 QSSSGVADLLRVRE-QLAEKKNPDNSNKTLNSQTENSSPVALTVPAEAEPEAQPEHQPES 537 Query: 499 KALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLR 557 K +E+ PEL + EA E D W+A ++ + + L QV LN+ ++ D+ + + Sbjct: 538 KDELNEELPELNDDIR-EAAEVDKWSAMIAGMDISGLARQVLLNSELQKLGDDDWLILVA 596 Query: 558 SSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARES 617 Q+ L N Q + E+L+ L G+T + + P+ TPL +Q I E + +A E Sbjct: 597 EEQKSLLNESTSQAVRESLAGLLGATARVDF-KVGVPSQPTPLMVQQHINEYRHQRACEI 655 Query: 618 IIADNNIQTLRRFFDAELDEESIR 641 + D +Q L++ F A++DE SI+ Sbjct: 656 LHGDAGVQDLQQRFQAQIDESSIQ 679 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 243/362 (67%), Positives = 284/362 (78%), Gaps = 1/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVLTAL N L GR+HHAYL SGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++ PCGVCD CREI+QG FVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLP+TILSRCLQFHLK+LD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QLE +L++E EPRAL LA+AA+GS+RDALSLTDQA+A G+G V ++V AM Sbjct: 181 TQIAKQLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+EA++ + MA I E A G +++ L E+ GLLHR+AM QL PA Sbjct: 241 LGTLDHRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A E + +LA+ + P ++QL YQ +L GRK+LP+APD R +EMT LR LAF Sbjct: 301 TVQEQGADAE-SLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTSLEMTCLRMLAFS 359 Query: 361 PR 362 PR Sbjct: 360 PR 361 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 61/123 (49%) Query: 521 DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 DPWA +++ + + Q+A+N+ + V L L+ QRHL + A+ LAE + Sbjct: 741 DPWAELIARTGVGGRLRQLAINSVMTRQGDKVLLTLKPEQRHLVSDRARVDLAEIIGPEL 800 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 G V++ + P TPLE +Y Q + D N+Q LR+ F A L +ESI Sbjct: 801 GQAVQVEVTLGTVPDQETPLEIEHRLYLGVREQVSRDLEQDPNVQFLRQRFGAVLHQESI 860 Query: 641 RPI 643 P+ Sbjct: 861 EPL 863 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/365 (62%), Positives = 281/365 (76%), Gaps = 2/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYSAQIQA--FAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPL 365 P P+ Sbjct: 359 PEKPV 363 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 71/118 (60%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W ++ L + V Q+A+N+ + N + L L+ Q+HL+ A ++L +AL+ G+ Sbjct: 933 WYKLMASLEIGGRVRQLAVNSICQLQANPLPLLLKPDQKHLSAPVAIEQLEQALTAALGN 992 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++ +V +P TPLE R+ ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 993 PRQVEVVIGIDPTRETPLELRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1050 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 228/365 (62%), Positives = 281/365 (76%), Gaps = 2/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYSAQIQA--FAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPL 365 P P+ Sbjct: 359 PEKPV 363 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 71/118 (60%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W ++ L + V Q+A+N+ + N + L L+ Q+HL A ++L +AL+ G+ Sbjct: 902 WYKLMASLEIGGRVRQLAVNSICQVQANPLPLLLKPDQKHLAAPVAIEQLEQALTAALGN 961 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++ +V +PA TPLE R+ ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 962 PRQVEVVIGTDPARETPLEMRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1019 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/365 (63%), Positives = 279/365 (76%), Gaps = 2/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFEQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 DEIGTQLNHILTQEQLPFEVEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVIALLKALTDADITVLMQTSAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 CAQQSLYSAQIRA--FAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMPL 365 P P+ Sbjct: 386 PEKPV 390 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 67/118 (56%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W ++ L + V Q+A+N+ + + + L L+ Q+HL A +L +AL+ G+ Sbjct: 829 WYKLMASLDIGGRVRQLAVNSVCQAQSDPLPLLLKPDQKHLAADVAIVQLEQALTAALGN 888 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + +V +P TPLE R+ ++E L QA++S+I D+N+Q L + AELD +++ Sbjct: 889 PRRVQVVIGSDPKRETPLELRKRFHQELLQQAQQSLIKDDNVQWLIQRLGAELDTDTL 946 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust. Identities = 228/361 (63%), Positives = 280/361 (77%), Gaps = 2/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QLE IL +E + E +AL LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEISQQLEFILGQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ Q + L++++ +A+ +M + + G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDERQVIGLLKSLCDADIAHLMQTTAQVLSFGADADEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + ++ A+ + P +QLYYQ LL GRKEL +APD + G+EM LLRA+AF Sbjct: 301 AAQHSLYSEQILA--FAKQLKPEQVQLYYQILLTGRKELAFAPDPKSGLEMALLRAVAFV 358 Query: 361 P 361 P Sbjct: 359 P 359 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 61/118 (51%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W ++++ + + Q+A+N+ + + L L+ Q+HL A ++L ALS Sbjct: 773 WYKMMAEVKIGGRIRQLAVNSVCQGLASPFPLLLKPDQKHLGADVAVKQLEAALSEYLQQ 832 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 V + + + TPLE R+ ++E L QA++ +I N +Q L DA+L E+S+ Sbjct: 833 DVSIAVNVGYDEHRETPLELRKRFHQELLQQAKQRLIGSNKVQWLLSQLDAQLQEDSL 890 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust. Identities = 235/409 (57%), Positives = 298/409 (72%), Gaps = 9/409 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L + Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + ++ A++LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D+ + L++A+ + + + +M + + + G + +L +L LLH+I + Q +P+ Sbjct: 241 LGTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ +++ A+ + P +QLYYQ LL GR++LP+APD + G+EM LLRA+AF Sbjct: 301 AA--QLSQYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMALLRAIAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 PE P Q + A + ++ P P+ APT P+ T Sbjct: 359 -------PEAPVQRWMGEAGSEILLPDTPLPELGKGEDVAPTSARPDGT 400 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 62/118 (52%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W +S L + V Q+A+NA + + L L+ +Q+HL GA +L +ALS G Sbjct: 968 WYRLMSALEIGGRVRQLAVNAVCKAFSEPLPLVLKPNQKHLAAPGAISQLEDALSKALGG 1027 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + ++ P TPLE RQ + E L QA + ++ D NIQ L + AE++ +S+ Sbjct: 1028 SCQVAFSVGVEPERETPLEIRQRFHRELLEQAHQGLLQDENIQWLTQVMQAEMEPDSL 1085 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 228/365 (62%), Positives = 278/365 (76%), Gaps = 2/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFDQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGACGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I QL HIL +E + A++LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 GEIGTQLNHILTQEQFPFDAEAIKLLAKAANGSMRDALSLTDQAIAFGGGNVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVVALLKALTDADIGVLMHTCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 AAQQSLYSAQIRA--FAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMPL 365 P P+ Sbjct: 386 PEKPV 390 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 4/141 (2%) Query: 504 EKTPELAAKLAAEAIERDP----WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSS 559 E+T E L+ I P W ++ L + V Q+A+N+ + + + L L+ + Sbjct: 982 ERTQEREVALSTLPISGHPLDLHWYKLMASLEVGGRVRQLAVNSVCQTQSDPLPLLLKPN 1041 Query: 560 QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESII 619 Q+HL A +L +ALS G+ + +V + TPLE R+ ++E L QA +S+I Sbjct: 1042 QKHLAADVAIVQLEQALSAALGNPRRVQVVIGIDAQRETPLELRKRFHQELLQQAHQSLI 1101 Query: 620 ADNNIQTLRRFFDAELDEESI 640 D+N+Q L + AELD +S+ Sbjct: 1102 HDDNVQWLIQRMGAELDADSL 1122 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 228/361 (63%), Positives = 280/361 (77%), Gaps = 2/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA++A GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYSAQIQA--FAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 P 361 P Sbjct: 359 P 359 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 71/118 (60%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W ++ L + V Q+A+N+ + N + L L+ Q+HL + A ++L +AL+ G+ Sbjct: 864 WYKLMASLDIGGRVRQLAVNSICQVQSNPLPLLLKPDQKHLAAQVAIEQLEQALTAALGA 923 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++ +V +P+ TPLE R+ ++E L QAR+S+I D+N+Q L F AEL+ +S+ Sbjct: 924 PRQVEVVIGTDPSRETPLELRKRFHQELLQQARQSLIMDDNVQWLINRFGAELENDSL 981 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/368 (62%), Positives = 284/368 (77%), Gaps = 8/368 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGR+ Sbjct: 61 GLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L E + E AL LLA+AA GS+RDALSLTDQAIA G GQV + V M Sbjct: 181 DEISDQLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAA---ARGIEWEALLVEMLGLLHRIAMVQL 297 LG++D+ Q ++L+EA+ +A+ VMAL+ +A + G E E +L +L LLH+I + Q Sbjct: 241 LGSIDEKQVIALLEALAKAD---VMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQF 297 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +PAA M+ +++ A+ + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+ Sbjct: 298 APAAA--QMSLYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAV 355 Query: 358 AFHPRMPL 365 F P P+ Sbjct: 356 TFVPEQPV 363 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 57/316 (18%) Query: 379 APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG-----ATKAKKS-- 431 A +A ++ + VP Q +S P + + VLAAR L G + AKKS Sbjct: 606 AQSAAISTSLVPSQLESQPSAEASSASDDILDAVLAARDSLLDGIGEEDPQESSAKKSVA 665 Query: 432 ------EPAAATRARP-VNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR---WK-- 479 P +A P ++N+ + + +D+ Q + +A A ++E + W+ Sbjct: 666 ERKPFAPPVRKPKAEPEIDNSDPATVGAKSDQAQEN-IKAA--NADNQEETFDRPPWEEP 722 Query: 480 -ATTPVMQQKEVVATPKALK----KALEHEKTPELAAKLAAEA----IERDPWAAQVSQL 530 A P + +V +A K A+E ++TP+ + ++ D + Q +L Sbjct: 723 HAQDPTPRFDDVAVEKEANKAADNAAVEPKRTPQPQNQTEQQSKPPVTSLDSTSVQDVEL 782 Query: 531 SLPKL--------------------------VEQVALNAWKEESDNAVCLHLRSSQRHLN 564 +LP L V Q+A+N+ + + + L L+ Q+HL Sbjct: 783 NLPALPSGEITGNDIDLKWYRFMADLEVGGRVRQLAVNSVCHQFEQPLSLLLKPDQKHLG 842 Query: 565 NRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI 624 A ++L EA+S G E+ I + + TPLE R+ ++E LAQA +I D+N+ Sbjct: 843 ADVAIKQLEEAMSKALGEPSEVRISVGVDSSRETPLEVRRRFHKEILAQAHHGMITDDNV 902 Query: 625 QTLRRFFDAELDEESI 640 + L A+L +S+ Sbjct: 903 RWLSENMGAQLTPDSL 918 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust. Identities = 250/395 (63%), Positives = 295/395 (74%), Gaps = 16/395 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ F +V+GQ+HVL AL+N L GR+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPRNFHEVMGQQHVLQALSNALDQGRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+ PCG C CREI+QG FVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 CLNCETGITSRPCGQCSACREIDQGNFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL Sbjct: 121 KIYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALTR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL+ +L E + +EP AL LLA+AA+GS+RDALSL+DQAIA G+G + + V M Sbjct: 181 EQIVEQLQRVLQAEQLTYEPAALSLLAKAAQGSMRDALSLSDQAIAYGNGLLQAETVQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 LGTLD Q ++ + +G +M I A +++ L VE+ LLHR AM QL Sbjct: 241 LGTLDHRQLYQILSLLAARDGAALMQQIGSLAELAPDYDQLHVELASLLHRTAMWQLLGQ 300 Query: 298 --SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 P A +D ++L LA IPP ++QLYYQ L GRKELP APD R +EMTLLR Sbjct: 301 QTEPGA--DDTEELQL----LAEQIPPEELQLYYQITLNGRKELPLAPDGRSALEMTLLR 354 Query: 356 ALAFHPRMPLP----EPEVPRQSFAPVAPTAVMTP 386 LAF PR P +P++ ++ AP A + V TP Sbjct: 355 MLAFAPRAGRPAITEQPQLIHRNTAPAA-SFVATP 388 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Query: 521 DPWAAQVSQLSLPKLVEQVALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 D WA V++L + V Q+A+ A ++ ++ L +R+ RHL Q+LAEA+S + Sbjct: 628 DQWAQTVAKLPVAGRVRQLAMQAVVTDQQADSWHLQIRNEARHLAQPRMVQELAEAISTI 687 Query: 580 KGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 + + L + A+ P E Q +A +++D N+Q L++ F A LD+ S Sbjct: 688 LPTAINLQVEPVVQLALPCPAEIEQQERIRLQQEAELLLLSDPNVQFLQQRFGATLDDGS 747 Query: 640 IRPI 643 I+P+ Sbjct: 748 IQPL 751 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 295/665 (44%), Positives = 374/665 (56%), Gaps = 57/665 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF D+VGQEHVL AL + L R+HHAYLF+GTRGVGKT+I RLLA+ Sbjct: 1 MSYQVLARKWRPRTFEDMVGQEHVLQALIHALEHQRLHHAYLFTGTRGVGKTTIGRLLAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT PCG CD+C+EI + RFVDLIEIDAASRT V+D R+L DNVQYAP RGR+ Sbjct: 61 CLNCETGITPNPCGECDSCKEILENRFVDLIEIDAASRTGVDDMRELTDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHML+ SFNA LKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L+H+L EE I E AL LLARAA+GS+RDALSLTDQAIA G+ ++ VS M Sbjct: 181 EHIVGHLKHVLTEEQIPFEDPALWLLARAADGSMRDALSLTDQAIAFGNENLAASDVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +V A+VE +G +++ IN + ++ +L +ML L HR+ M Q+ P Sbjct: 241 LGTIDQRDIQRIVNALVERDGPGLLSEINRISDFAPDYGVILSDMLSLFHRVTMEQVVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N M +++ELAR + D QL+YQT LIGRK+L PD RMG EMTLLR LAF Sbjct: 301 SADNAMGDA-AQVQELARRLSAEDAQLFYQTALIGRKDLSVTPDARMGFEMTLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P EP A V+ + + P+P Q A T Sbjct: 360 PGTDRREPP------ALVSGNSNNGTAESEPEPGPVSQTAST------------------ 395 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Q A + EPA P A LE + D P P E + E+ W+ Sbjct: 396 --QAVAAAPQPEPAPQPVPSPEPVAELEPQPPMVD----DPPPWEPEDYGVQAESPEWQE 449 Query: 481 TTP-----------VMQQKEVVATPKALKKALEHEKT--------PELAAKLAAEAIERD 521 P + + E P + ++ E+ PELA + + D Sbjct: 450 PVPQSDSSIEPDASAISEPESAPEPVSASDPVQSEQNAGQALVNEPELAPAEPEQPVTAD 509 Query: 522 P--WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 W L + + +A + AV L L L N ++K+ AL Sbjct: 510 GFVWERDFRSLGITGMPGNLASYSSMRMEGQAVVLTLDEGHARLLNARHEEKILAALRSR 569 Query: 580 KGSTVELTIVEDDNPAVRTP--LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 G +L I E P + TP E RQ +K A+ ESI D ++++ F+ + E Sbjct: 570 FGDATQLKI-EQGVPGLHTPAAFEERQRAARQKAAE--ESIRQDPLVKSIVERFEGRVVE 626 Query: 638 ESIRP 642 ESIRP Sbjct: 627 ESIRP 631 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 217/362 (59%), Positives = 275/362 (75%), Gaps = 3/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+ A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ + PCG C C EIEQG FVDL+EIDAASRTKVEDTR+LLDNVQY P+RGR+ Sbjct: 61 SLNCELGMGSKPCGKCSTCVEIEQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL+H+ +E + + P AL +ARAA+GS+RDALSL+DQAIA G+G VS V+ M Sbjct: 181 AQIAQQLQHVFAQEQLQNAPEALAQIARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D Q L L+ A++ E V L++ + + +++ +L E++ LLH++A+ Q P Sbjct: 241 LGLMDKTQVLKLLNAVLNKQNESVFELVDFMSEQAVDYSQVLNELMSLLHQVALTQFVPD 300 Query: 301 ALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A + I R + +LA+ P IQL YQ L G++++P+A D R G+EMTLLR LAF Sbjct: 301 ACK--LETISARAIYQLAKNALPEHIQLLYQIALQGKRDMPFAADARTGLEMTLLRMLAF 358 Query: 360 HP 361 P Sbjct: 359 SP 360 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 2/121 (1%) Query: 521 DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 D W+A ++Q+ + L +Q+AL++ + + V L+L ++ HLN A+++L ALS + Sbjct: 794 DKWSALITQMQVAALTKQLALHSEFTQDGDKVVLNLVQTKEHLNTDSAKEQLQRALSDVL 853 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + L + D A+ TP +Q+I + A++ + + +I + F+A++ +SI Sbjct: 854 QQQITLEVHVGD--AINTPFALQQSINRVRFEYAKQVVETNESICMFKDMFNAQVLNDSI 911 Query: 641 R 641 + Sbjct: 912 K 912 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 240/456 (52%), Positives = 308/456 (67%), Gaps = 13/456 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++VGQ HV AL N L+ R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GI+A PCG C +C++IE GR++DL+EIDAASRTKVEDTR++LDNVQYAP RGR+ Sbjct: 61 SLNCDEGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+L AL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ QLEH+L E + + AL+++A+AA+GS+RDALSLTDQAIA +G ++ QAV M Sbjct: 181 SEIKTQLEHVLTHEKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + SL+ A++ +G +M + A+R + ALL +++ L H + QL P Sbjct: 241 LGLMDTHYSQSLLAALLAQDGAALMKEVANVASRNPNYVALLDDLIALTHLTQLSQLVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A D + + +A+ P IQ+YYQ LL G+K+L +AP+ R+G EM +LR LAF Sbjct: 301 AAALDETNADY-ITHVAQNTNPQQIQIYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFQ 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ--APTVPLPETTSQVLAARQQ 418 P + QS PVA P Q SA + + PLP T + Q Sbjct: 360 P--------IDTQSQQPVAVNT--QPVQSNTTKASALRDILNKSKPLPSTAQNNDTTQPQ 409 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVT 454 + + A AK SEP NN++ + S T Sbjct: 410 IIEPKPADVAKLSEPQNVAPDPLNNNSSTTQHVSTT 445 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Query: 517 AIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEAL 576 A ++D WA + ++ L + Q AL++ + N + + + SQ+HL+ +Q+L AL Sbjct: 717 AHQQDEWAYLIKRMGLGGRMRQFALHSIFTKQGNNLHIDVDESQKHLDTPMLRQRLDAAL 776 Query: 577 SMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 S + V L+I + +P +Q I + QA + I +D+NI ++ F AE+D Sbjct: 777 SSIYEHNVTLSI-NFAKGVIDSPYLIQQKIDAGRHQQAIDVITSDDNIVQFQQLFSAEID 835 Query: 637 EESIRPI 643 E SI+ + Sbjct: 836 ENSIQAL 842 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/366 (62%), Positives = 279/366 (76%), Gaps = 3/366 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+TA++N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPNKFSELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+TG++A PCG C CR+IEQGRFVDL+EIDAASRTKV+DTR+LLDNVQY P +G + Sbjct: 61 SLNCDTGLSANPCGECGTCRDIEQGRFVDLLEIDAASRTKVDDTRELLDNVQYRPTQGDY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI+ QL H+L +EHI HEP AL LARAA GS+RDALSLTDQAIA G+ Q+ST VS M Sbjct: 181 EQIQQQLSHVLTQEHINHEPAALAQLARAANGSMRDALSLTDQAIAQGNNQISTVVVSDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ +M+E + V + A + +L E++ LLH+IAM Q+ P Sbjct: 241 LGLMDKNQILKILHSMIEGDKIAVFEQVESLAQTSPNYAHVLDELMSLLHQIAMTQVVPE 300 Query: 301 ALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + I R + +LA +I +QL YQ L G+++LP++ D R G EM LLR LAF Sbjct: 301 VCK--LETISARAIYKLAGSISKEHVQLLYQMALNGKQDLPHSMDGRSGFEMVLLRMLAF 358 Query: 360 HPRMPL 365 P P+ Sbjct: 359 TPVTPI 364 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 2/126 (1%) Query: 517 AIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEAL 576 A + D W + QL+L L +Q+A++A + V L L + HL+N + LAEAL Sbjct: 709 AAQIDEWTNVIGQLNLTGLNKQLAIHASFSREGDVVTLLLGQDKAHLHNETSVNALAEAL 768 Query: 577 SMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 S+ +++ L + + + TP + I + + A+ + ++ +Q L+ F + Sbjct: 769 SVFFDTSITLQVSFGE--PINTPYALQMHINQIRNEYAQSILNSNPELQKLQSTFGTSVV 826 Query: 637 EESIRP 642 +++P Sbjct: 827 SGTLKP 832 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust. Identities = 289/682 (42%), Positives = 391/682 (57%), Gaps = 54/682 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IARLLAK Sbjct: 1 MSYQVLARKWRPGTFDEMVGQVHVLKALVNALDQERLHHAYLFTGTRGVGKTTIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGRF Sbjct: 61 SLNCEQGVSSKPCGQCASCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HIL E + + +L +A A+GS+RDALSLTDQAIA G G ++ Q V+AM Sbjct: 181 EHIVQHLNHILTVEQVPFDEPSLWAIAEGAQGSMRDALSLTDQAIAFGHGALAEQEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+LV A+++ + + ++A+++E +++ LL E++ LHR+A+ Q P+ Sbjct: 241 LGTVDLKRVLNLVRALLQKDADGLLAMVSELDEHTPDYQTLLTELMSTLHRVAIAQAVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N + M LA+ DIQLYYQ + EL AP R G EMTLLR LAF Sbjct: 301 AISNHKGDRDAIMA-LAKAGYAEDIQLYYQIAGKSKGELSLAPSERAGFEMTLLRMLAFS 359 Query: 361 ----------PRMPLPEPEVPRQSFAPVAPTAVMT--PTQVPPQPQSAPQQAPTVPLPET 408 P + PE + S APV P AV T P +P + AP P+ ET Sbjct: 360 QTPPSSIDTLPPLTTQAPETTQPSAAPVKP-AVSTPEPVSIPASEEVAPDVGPS----ET 414 Query: 409 TSQVLAARQQLQRVQGATKAKKSE----------PAAATRARPVNNAALERLASVTDRVQ 458 TS+ + + + K +E PA+ V E VQ Sbjct: 415 TSEAAVPSEPVNAAETPVKKTPAESVDAAEVLTQPASQPEPATVPEPVSEPEPEPEITVQ 474 Query: 459 ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL----KKALEHEKTPELAAKLA 514 P P+ + E + ++ +++ P + K +E E P+ AA+L+ Sbjct: 475 EDPHPAGAVDTTSMLEPVAEQPPIETPTEENLLSEPDSASDPESKVVETE--PQTAAELS 532 Query: 515 AEA------IERDP---WAAQVSQLSLPKLVEQV-ALNAWKEESDNAVCLHLRSSQRHLN 564 A ++ DP W + +L L + + + A + W+ + + L + + R + Sbjct: 533 DVATWPDTDLDADPVFWWQVTLHRLGLSGMTKTLFAHSQWRGYENGQLSLVISPNYRKIM 592 Query: 565 NRGAQQKLAEALS----MLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIA 620 N QQ L +A++ + T E V+ +TP W + + +A + + A Sbjct: 593 NDSHQQYLLQAITDWLPDCQSLTYEFGAVD------KTPQLWLDQLVQAANDRAYQHLKA 646 Query: 621 DNNIQTLRRFFDAELDEESIRP 642 D ++TL F EL +ES P Sbjct: 647 DAFVETLINEFKGELIQESAVP 668 >UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XQ9_COLP3 Length = 715 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 214/361 (59%), Positives = 271/361 (75%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++GQEHV+ LAN LS R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT PCG CD C +I+QGRFVDL+EIDAAS+TKV+DTR++LDNVQYAP+RGRF Sbjct: 61 SLNCELGITDKPCGKCDACIDIDQGRFVDLLEIDAASKTKVDDTREILDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKF+LATTDPQKLP+T+LSRCLQFHLKAL V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L IL+ E ++HE L LLA+AA GS+RD+LSLTDQAIA G G ++ + M Sbjct: 181 KQIEDKLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + LV +++ + + +M L E A+ + L E++ L H+IA++Q+ Sbjct: 241 LGGIDQNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +++ ++ + D+QLYYQ L GRK+LPYA D + +MTLLR AF Sbjct: 301 PFDL-PADLLALLKKFSQAMSAEDVQLYYQISLNGRKDLPYAFDEQAAFDMTLLRLFAFK 359 Query: 361 P 361 P Sbjct: 360 P 360 >UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=A9D7T4_9GAMM Length = 882 Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust. Identities = 227/365 (62%), Positives = 281/365 (76%), Gaps = 2/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITA+PCG C +C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGRF Sbjct: 61 GLNCEQGITASPCGQCSSCVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L +E + + AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 181 DEISAQLSYVLTQEQLTFDHAALTLLAKAANGSMRDALSLTDQAIAFGAGTVQLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ LSL A+V+ + E +M +I + + G + E +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEKHVLSLFNALVQGDIENLMRMIGQILSFGADPEEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA++F Sbjct: 301 AA--QLSIYSEQIKAFAEQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFV 358 Query: 361 PRMPL 365 P P+ Sbjct: 359 PETPV 363 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 63/118 (53%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W +S + + V Q+A+N+ E + L L+ Q+HL A +L EAL + G+ Sbjct: 737 WYRLMSAIDVGGRVRQLAVNSVCHEFTEPLSLLLKPIQKHLAAEIAIVQLEEALGKVLGA 796 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++++I + TPLE RQ + E AQAR+ ++ D N+Q L AEL+ +S+ Sbjct: 797 EIKVSISVGVDGDRETPLEVRQRFHREIQAQARQGLLTDTNVQWLMSQMGAELENDSL 854 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust. Identities = 282/666 (42%), Positives = 389/666 (58%), Gaps = 43/666 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FA++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPRIFAEMAGQQHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GRF+DLIE+DAASRT V+D R+LLDNVQYAP+RGR+ Sbjct: 61 CLNCEVGVSSVPCGECSSCTEIGEGRFIDLIEVDAASRTGVDDMRELLDNVQYAPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+ SF ALLKTLEEPP HVKFL ATTDPQKLP+T+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPITVLSRCLQFNLKNLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L+ +L EE + E AL LARAA+GS+RDALSLTDQAI G GQV+ VSAM Sbjct: 181 ERITEHLQFVLGEEQVPFEEAALWSLARAADGSMRDALSLTDQAIGHGGGQVNEGEVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + + +A++ +G ++A I A + +++A L ++L + H++A+VQ P Sbjct: 241 LGTIERSYVVDICQALISGSGTELLAAIGRMAEQAPDYDAALTDILSVWHQVAIVQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +A + LA + D QL+YQ L+GRK+L +PD + G EM +LRALAF Sbjct: 301 ALDKGVANY-TELLALAAAVSREDTQLFYQICLLGRKDLQLSPDAKSGFEMVMLRALAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE-TTSQVLAARQQL 419 P+ P+ A AV P +V P + PE + V+ R L Sbjct: 360 PQTSAQVGSGPKAVAKAQASAAVAPPLEVEPSGKK----------PEAVVTAVVDDRPPL 409 Query: 420 QRVQGATKAKKSEPAAATR---ARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + A S P + + A PV A + S + Q P+ + +EA Sbjct: 410 EPAVEAVAEAVSAPESTVKPVTAAPVEPTAQLVVESPVEVYQKSVQPTGYDGV---QEAV 466 Query: 477 RWKATTPVMQQKEVVATPKALKKALE-------HEKTP----ELAAKLAAEAIER---DP 522 + V Q E + +K+ +E E+TP E A A +ER D Sbjct: 467 QKTVDGAVGQPIEETVD-ETIKETIEEASEKPSQERTPLQTPEAAPAPAPIPLERFTPDN 525 Query: 523 WAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALS--ML 579 W QLS+ + ++A + + S + + S L + Q++ +EALS Sbjct: 526 WIQLRRQLSIGASLGEIASHCLYLGRSGQQLNFLIDSDHNSLYDEPHQEQFSEALSDYFQ 585 Query: 580 KGSTVELT--IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 + TV++T + E + P T E E+L +A +S+ D + ++ FD ELDE Sbjct: 586 QPVTVDITLGVAEKETPRAATTRE-----KAERLVEAVDSLNQDPAVVKFKQLFDGELDE 640 Query: 638 ESIRPI 643 S+RPI Sbjct: 641 RSVRPI 646 >UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q0A8H8_ALHEH Length = 648 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 290/665 (43%), Positives = 373/665 (56%), Gaps = 48/665 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+++ GQEHVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MAYQVLARKWRPRTFSEMAGQEHVLRALVNALEQQRLHHAYLFTGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TA PCG CD CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVTAEPCGTCDACRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLPG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L ++ +E +A EP+AL L +AA+GS+RDALSL DQAIA G G V V AM Sbjct: 181 GLVADYLHTVVEQEGVAAEPQALARLGQAAKGSMRDALSLLDQAIAFGAGAVREDEVCAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D L +EA+ +G ++A+ + R ++ L E+L LH++A++Q+ P Sbjct: 241 LGTIDRGFVLEALEALAAGDGRALLAVTARMSERAPDFSDALDELLHCLHQLALLQVVPE 300 Query: 301 AL--GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 AL G+ A R+R+LA +P D+QLYYQ L GR++LP AP+ R G EM LLR LA Sbjct: 301 ALPAGDPDAD---RLRDLAARLPAEDVQLYYQIALNGRRDLPLAPEGRTGFEMVLLRMLA 357 Query: 359 FHP------RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV--------- 403 F P + A +P + P P+ ++ P PT Sbjct: 358 FQPVTGTAVAATGGAGADAPPAAAAGSPRSQAAPKATRPRREAHPSPTPTERAEPAAAPA 417 Query: 404 ---PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQAR 460 P PE + R+ L R A R + V + Sbjct: 418 GGSPPPEQGGGLGGYREALMR--------------AARGQAVEPDGPAPAPADPSAAAEP 463 Query: 461 PVPSALEKAPAKKEAYRWKATTPVMQQK--EVVATPKALKKALEHEKTPELAAKLAAEAI 518 E A + W PV ++ + A P A E PE A A I Sbjct: 464 APAGGREPAAGLTDPPAWAEGPPVSDEEPPPIGAQPAAA------ETAPETTAPDDA-GI 516 Query: 519 ERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALS 577 + W + L L + Q A + W E + V L L S L + +LA+ L Sbjct: 517 TPETWPWRARDLPLDGALRQFAAHCEWVGEEEGRVILRLDSGHGMLRTPALEAELAQVLG 576 Query: 578 MLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 G V L V ++P TP + E+L ARES+ D N+ L + F AEL Sbjct: 577 DYLGRAVRLD-VRLESPHRDTPATVARRERAERLRAARESLENDPNVARLHQRFGAELLP 635 Query: 638 ESIRP 642 +++RP Sbjct: 636 DTVRP 640 >UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Psychromonas RepID=A1SX03_PSYIN Length = 774 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 214/361 (59%), Positives = 273/361 (75%), Gaps = 4/361 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VVGQ+HVLTAL+N L+ R+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPGNFQEVVGQQHVLTALSNSLAQNRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TATPCG C +C+ I+QGRFVDL+EIDAASRTKV+DTR++LDNVQY PA+GR+ Sbjct: 61 SLNCEKGVTATPCGACVHCQAIDQGRFVDLLEIDAASRTKVDDTREMLDNVQYKPAQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+T+LSRCLQFHLKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITVLSRCLQFHLKAILP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL +ILN E E AL ++A AAEGS+RDALSLTDQA+A G G ++ Q+V M Sbjct: 181 QEIETQLAYILNHEQATFEHAALTVIATAAEGSMRDALSLTDQALAFGSGHIAYQSVLKM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D++ L+ + N +V I+E G ++ L + L H IA+ Q+ P Sbjct: 241 LGSIDNNHLHYLLHFIASGNVSKVFLKIDEFVHLGADFAMLHQTLASLCHEIALSQMQPK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +A++L LA + P ++QLYYQ + G K+ +AP+ ++ EMT++R LAF Sbjct: 301 QNVTQKSAVQL----LAERLTPEEVQLYYQIAVQGYKDYAFAPNGKIAFEMTVMRLLAFK 356 Query: 361 P 361 P Sbjct: 357 P 357 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 521 DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRH-LNNRGAQQKLAEALSML 579 DPWA + ++ L LV+ +A N+ + + + L L+ Q+H LNN +L L + Sbjct: 651 DPWALAIQKMRLVGLVKLLAKNSVMKIVEQQIVLTLKPEQQHLLNNHQLCTQLETKLKVH 710 Query: 580 KGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 G+ + + + T E AIY+ L A+ +I D NI T + A++ E S Sbjct: 711 FGAQMSMYVEVGHVTGKLTAFESELAIYQTYLNNAKTAIKEDQNILTFVSEYGAKVYENS 770 Query: 640 IRPI 643 I P+ Sbjct: 771 IIPL 774 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 286/652 (43%), Positives = 384/652 (58%), Gaps = 27/652 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP F VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPMQFDQVVGQQHVLEPLFHALEQQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C +C EIEQGRFVDLIE+DAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCERGVSARPCGECPSCEEIEQGRFVDLIEVDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT++SRCLQF+L+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVVSRCLQFNLRALDR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QLE++L E++ H+ +AL LLA++A+GS+RDALSLTDQAIA G G+V ++V M Sbjct: 181 EQIVGQLEYVLENENVPHDAQALTLLAQSAKGSMRDALSLTDQAIAQGQGKVQVESVQRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D L++A+ + V +E + + +L E+ ++HRIA++Q PA Sbjct: 241 LGHLADAHVHPLLDALASGDSGSVFEKFDELKSLVPDPLMILNELQRVIHRIALIQQIPA 300 Query: 301 ALGNDMAAIELRMRE-LARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 +G A + E L R +P +QLYY+ ++ G+KE PYA D + VEMTLLR L+F Sbjct: 301 MMG---AEDKTNTTEALLRKLPAEVLQLYYRIVIEGKKEAPYAVDPQSAVEMTLLRLLSF 357 Query: 360 HPRMPLPEPEVPRQSFA--PVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 PE ++ P + +T ++ + A Q + + A Sbjct: 358 ----TFENPESGEEALTRPPESNLDTITQSEQAEEAAHAGQHSGDTSIQSEADDTSALEA 413 Query: 418 QLQRVQG-ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK---- 472 Q + ++ A + + S PA A + A E LAS+ + Q EK ++ Sbjct: 414 QQRDIEAQAAQHRMSRPAEGV-AEDNSVAPDEGLASLLNMRQDLSGHQEPEKKNSEIDIE 472 Query: 473 --KEAYRWKATTPVMQQKE-VVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 E + P Q E V TP +L ++ + + + AA+ D WAA V Sbjct: 473 TPSEQPHLPSRQPDKQHAEPVQTTPVSLSHI---QQRFDSSTRRAADV---DSWAALVDA 526 Query: 530 LSLPKLVEQVALNAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 ++ L Q+ LN+ E+ C+ + Q+ L + EAL + + E Sbjct: 527 TAVQGLTRQLLLNSVLEKVGHQQWCIWVTEEQQSLLSEKTVALAREALCEVLSAQGEYRF 586 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + + TPL +QAI +L QA+ + D+ L FDA DE SI Sbjct: 587 LVGSQ-QMSTPLLIQQAIDHYRLEQAKLWLQNDSGFNELLNSFDAVTDETSI 637 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 240/413 (58%), Positives = 295/413 (71%), Gaps = 14/413 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ HVL AL N L R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITATPCG C CREI +GRFVDLIE+DAASRTKV+DTR++LDNVQY P+RGRF Sbjct: 61 GLNCEQGITATPCGQCSACREIAEGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ QL +L+ E + + AL LLA+AA GS+RDALSLTDQAIA G G+V V M Sbjct: 181 PQIQAQLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLAQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG +D Q L+L +A+ + + E ++ A G + + +L +L LLH+I++ Q +P Sbjct: 241 LGAIDKGQILNLFDALCQGDIETLLTTARTAMGFGADADEVLRALLELLHQISLAQFAPA 300 Query: 300 -AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A++ ++ AA+ A+ + P +QLYYQ LL GRK+LPYAPD G+EM+LLRA+ Sbjct: 301 TASISDNGAAV----LAWAQALKPEQVQLYYQILLSGRKDLPYAPDPASGLEMSLLRAVG 356 Query: 359 FHPRMPLP-----EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP 406 F P P+ E ++ VAP+ T + PQ +AP A P Sbjct: 357 FVPEKPVSRWQSGEGVSAAEALKLVAPS---TEGKSAPQADTAPNHAVVTETP 406 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%) Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W + L + V Q+A+N+ N + L L+ Q+HL A +L EALS G Sbjct: 766 WYKLMGALEIGGRVRQLAVNSVCLAWSNPIPLVLKQDQKHLAAPVAIGQLNEALSKALGH 825 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 E+ + + P TPL+ R + E L+ AR ++ D + L + A D++SI Sbjct: 826 EAEIALEVGEVPGRETPLDIRARFHRELLSDARGALNTDPAVLRLMQQAGAWFDDDSI 883 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 233/401 (58%), Positives = 291/401 (72%), Gaps = 3/401 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF ++VGQEHV AL N L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRTFHELVGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G+T+ PCG C+ CREI++GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP +GR+ Sbjct: 61 CLNCRQGVTSVPCGECETCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFTLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L HIL E +A++ +AL LL +AA+GS+RDA+SLTDQAIA G G+V V+AM Sbjct: 181 ERVVGHLSHILQAESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFGQGEVRHADVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+L EA+ E + RV+ + A +G ++ +L ++ G+ HR+A+ Q+ P Sbjct: 241 LGTLDHRHLLALAEALAEVDAARVLQEVASLAEQGPDFGGILDDLAGIFHRLAIAQMVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N + + LA D+QLYYQ L GR ++ APD R +EMTLLR LAF Sbjct: 301 ALDNGHGDRDT-LLPLAARFTAEDVQLYYQIALQGRGDMESAPDPRTALEMTLLRMLAFR 359 Query: 361 PR-MPL-PEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 P+ +P P+ +P + A TA P Q +AP Q Sbjct: 360 PQGVPKPPQTPLPIRGAAEGQATASTPTADAPGQLAAAPSQ 400 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 222/367 (60%), Positives = 279/367 (76%), Gaps = 1/367 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV++A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G A PCG C+ C+EIEQG +VDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL +E +A E AL LLARAA+GS+RDALSLTDQAIA G QV V+ M Sbjct: 181 EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ A+V + V+ L+N+ A + +++ + E+ LLH+IA+ Q P Sbjct: 241 LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + + +LA+TI +QL YQ L GRK+LP+A D + EMTL+R +AF Sbjct: 301 ACKLETTSAKA-IFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFA 359 Query: 361 PRMPLPE 367 P P+ E Sbjct: 360 PNAPIAE 366 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%) Query: 521 DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 D W+ V Q+ + L++Q+ L+A + N V L + SQ HL A+++L +A+ Sbjct: 810 DDWSNLVEQMPVAGLLKQLVLHAAFSRNGNHVSLEIHHSQTHLLKDSAKKQLVDAIHHGL 869 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 G VE++I + TP +Q I+ + A A I D IQ L FD + +++ Sbjct: 870 GENVEVSITLGE--PSSTPFALQQEIHAMRHAHAHSVIKTDETIQALLSTFDGSVLTDTV 927 Query: 641 R 641 + Sbjct: 928 K 928 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/373 (57%), Positives = 283/373 (75%), Gaps = 11/373 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++F +VVGQ+HVL AL NGL R+HHA+LFSGTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFEEVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++TPCGVC +C E++ GRFVDLIE+DAASRTKV+DTR+LLDNVQYAP++GR+ Sbjct: 61 SLNCEQGVSSTPCGVCQSCTEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFL ATTDPQKLPVTILSRCLQF+L+ L++ Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLEL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L ++L +E I EP AL+ LARAA+GS+RDALSL DQAIA G G+V++++V M Sbjct: 181 TQISDHLRYLLEQETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++ DQ + +++A+++ +G+ ++A E AA G ++ + +L L +IA +QL P Sbjct: 241 LGSISQDQLILILDALLKQDGKALLAQSAELAALGRDFHVVFDFLLSALQQIATLQLVP- 299 Query: 301 ALGNDMAAIEL---RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 D+ +E ++ ELA P IQL YQ L G+++L +A D + G +MTL+R L Sbjct: 300 ----DLEPVEANSPQLTELAAQFDPETIQLLYQIALHGKRDLSWAADPKSGFDMTLMRML 355 Query: 358 AFHPRMPLPEPEV 370 +F P P PEV Sbjct: 356 SFQPTTP---PEV 365 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%) Query: 523 WAAQVSQLSLPKLVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKG 581 W +++L L L Q+A N A + +V L L HL ++QKL +ALS G Sbjct: 445 WTQIIAELKLSALAHQLAENSALVKCEQQSVYLSLSPELGHLATDNSKQKLQKALSKKLG 504 Query: 582 STVELTIVEDD-----NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 ++L + D P + +QA+ ++ QA ESI D ++ ++ F+A + Sbjct: 505 QDLKLVFADADTTFETGPTLAVERAEQQAVKQQ---QAIESIHNDPTVEIIKNTFNARII 561 Query: 637 EESIRPI 643 E SI+PI Sbjct: 562 EHSIKPI 568 >UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Tax=Marinomonas sp. MED121 RepID=A3YHQ6_9GAMM Length = 823 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/362 (58%), Positives = 275/362 (75%), Gaps = 2/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQNFIELAGQDHVLQALVNALKQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCET GI+ PCG C +C EI +GRFVDLIE+DAASRTKVEDTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGISPEPCGTCGSCVEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYTPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 ++ + LE +L E ++++ L + +AA GS+RDALSLTDQAIA G+G +S V++ Sbjct: 181 PGRVVNYLEKVLTTEQLSYDEAGLWQIGQAANGSMRDALSLTDQAIAFGNGHISETDVTS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q + L++A+V+++ ++ L+N+ A ++ A+ +L LLHRIA+ Q P Sbjct: 241 MLGLVNQAQVVGLLDAIVQSDAANLLKLVNDLADYQPDFVAICASLLDLLHRIAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + + +++ +A+ +P IQL+YQT+LIG+++LP A + G EM LLR +AF Sbjct: 301 GALEDQLGDLA-KVKLIAQQVPSEVIQLFYQTMLIGKRDLPLAHSPKAGFEMLLLRLIAF 359 Query: 360 HP 361 P Sbjct: 360 RP 361 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 278/702 (39%), Positives = 404/702 (57%), Gaps = 68/702 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ VLARKWRP+ F+++VGQ HV+ AL+N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MTDTVLARKWRPKNFSELVGQTHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCGVC CR I++GRFVDLIE+DAAS+TKVEDTR+LL+NVQYAP +GR+ Sbjct: 61 ALNCEQGITSKPCGVCSTCRSIDEGRFVDLIEVDAASKTKVEDTRELLENVQYAPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDP KLP+T+LSRCLQF+L L + Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +IL +E + E AL ++A++A+GS RD+LS+ DQAIA G G+V AV AM Sbjct: 181 PQIQQHLAYILQQEQVTFEETALAMIAKSADGSARDSLSILDQAIAYGGGKVQYDAVQAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L+++ A+ + + + +I + A G+++ AL +++ LH+++M+Q+ Sbjct: 241 LGLVDQQFTLNILSALANESADELKEVIQQLALMGVDYTALNGQLIEALHQMSMLQV--- 297 Query: 301 ALGN--DMAAIELRM-RELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 LG+ + + IE+ M ++L+ + P IQ+ YQ L+ ++++ APD R+G EM+LLR L Sbjct: 298 -LGDLTESSLIEVEMLQKLSEQLSPERIQVLYQIALLAKQDMALAPDIRIGFEMSLLRML 356 Query: 358 AFHP-------RMPLPEPE--VPRQSFAPVAPTAVMTPTQVPPQPQSAPQ---------- 398 AF P M EPE + RQ A P +P QP +A + Sbjct: 357 AFKPVFSETMSSMEQTEPEEGMSRQENVKTARPGQNEPAAIPNQPAAADEARTNFEAPSH 416 Query: 399 -QAPTVP---LPETTS--------------QVLAARQQLQRVQGATKA----KKSEPAAA 436 +AP+ P +PET + + + +L G ++A +++ A Sbjct: 417 FEAPSAPQSSMPETQAAPQSSAPQPSGEMDHLTDLKARLDSTLGKSEAPIEHRENHDAEV 476 Query: 437 TRARPVNNAALERLASV---TDRVQARPVPSAL-----EKAPAKKEAYRWKATTPVMQQK 488 + +LE+ AS T + RPV SA P +K A +A P + Sbjct: 477 PTFDVPSGQSLEQSASFLTETRQEDDRPVESAAAFQASSHVPVQK-AVTEEAMAPAFESP 535 Query: 489 EVVATPKALKKALEHEKTPELAA-----KLAAEAIERDPWAAQVSQLSLPKLVEQVALNA 543 + + + ++ E E E ++ A+ W A ++QL L + ++A + Sbjct: 536 GMESVTPSSQEHFEQEPVSEAVVADAPIEMNADTASVTDWIALITQLQLEGMAAELARQS 595 Query: 544 WKEESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR-TPLE 601 + D ++ L + Q H A Q+L E + G V L V D P TP + Sbjct: 596 ILVKRDAQSLTLSIDPEQVHAKTELALQRLEEQVKAQLG--VRLIFV--DYPEDHWTPAK 651 Query: 602 WRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 A + + A ESI D +Q L + + ++ E SIRPI Sbjct: 652 HFAAEAKARQGNAAESIRNDAVVQNLIQTLNLKVIESSIRPI 693 >UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYC4_MARMS Length = 752 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/366 (58%), Positives = 274/366 (74%), Gaps = 2/366 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCET GI+ PCG CD+CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGR Sbjct: 61 CLNCETNGISPEPCGTCDSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ L+ +L E + + AL + +AA GS+RDALSLTDQAIA G+G +S V+A Sbjct: 181 PQRVVDYLQTVLTTEEVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q L L+E++ N +V+ I + A ++ A+ +L +LHR+A+ Q P Sbjct: 241 MLGLVNQAQVLDLLESVASKNAAQVLTRIEQLADYQPDFTAICGSLLDVLHRVAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + + R++ +A ++ +IQ+ YQ+LLIGR++L A R G EM +LR +AF Sbjct: 301 GALMDQLGDLA-RIQAIAASVSSEEIQIMYQSLLIGRRDLHLAHSARAGFEMLMLRLIAF 359 Query: 360 HPRMPL 365 P P+ Sbjct: 360 RPAPPM 365 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust. Identities = 215/363 (59%), Positives = 266/363 (73%), Gaps = 1/363 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP FA++ GQEHVL AL N L+ R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MAYQVLARKWRPGNFAEMAGQEHVLKALTNALNQDRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C CREI +GRFVDLIEIDAASRTKVED R+LLDNVQYAP R R+ Sbjct: 61 CLNCEQGVSAIPCGECGVCREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I L H+L E++ E AL LARAAEGS+RDA+SLTDQAIA GDG++ + V M Sbjct: 181 QRIVSHLTHVLQAENVPAEEAALWELARAAEGSMRDAMSLTDQAIAFGDGKLEAKDVIEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + L+ + + ++A +N A ++ +L + LLHR+A+ Q P Sbjct: 241 LGTIEKHVVIDLLRTIAAQDCAAMLAQVNHMAQFAPDYAYVLQALAELLHRVAVEQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N + ++ ELA+T+ D QLYYQ L+GRK+L APD R G EM LLR +AF Sbjct: 301 GVDNSFGD-QQQVSELAQTLTAEDTQLYYQIALMGRKDLALAPDPRTGFEMALLRMIAFR 359 Query: 361 PRM 363 P + Sbjct: 360 PNI 362 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 211/361 (58%), Positives = 271/361 (75%), Gaps = 5/361 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++FA++VGQ HVL AL N L R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFAEMVGQGHVLQALTNALDQSRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++TPCGVC C EI+QGRFVDLIE+DAASRT V+DTRDLL+NV YAP RGRF Sbjct: 61 ALNCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHM S+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+L+AL + Sbjct: 121 KIYLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRALPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +L +E+IA EP AL L+A AA GS+RDALSL DQAIA G++ T VS + Sbjct: 181 SQIQQHLADVLQKENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFTGGKLDTVQVSQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +++A+ + + +R+ AL++EA R +E LL + + +H++AM Q Sbjct: 241 LGLSDHQIIWDMIDALYQQSADRLFALVDEALDRAVEPAILLAQFIESIHQLAMGQWI-- 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 M+A + ++I P +QL+YQ GR+++ ++P+ R+G+EMTLLR LAF Sbjct: 299 ---QSMSAAANPPPDELKSIDPQLLQLWYQIATTGRRDMAWSPNARIGLEMTLLRMLAFQ 355 Query: 361 P 361 P Sbjct: 356 P 356 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 269/677 (39%), Positives = 386/677 (57%), Gaps = 66/677 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TFAD+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE + PCG C++C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 61 SLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+P+T+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E++ ++P+ALQLL RAA GS+RDALSL DQAIA G G+V+ Q V M Sbjct: 181 QQVAEHLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+E ++ NGE ++ E +AR I +++ L E+ LL R+A++Q P+ Sbjct: 241 IGAVDKQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL ND E +R L++ + IQLYYQ + G+++LP APD G MTLLR LA Sbjct: 301 ALANDDPERETLLR-LSQALSGEQIQLYYQCAIHGKQDLPLAPDEYAGFVMTLLRMLA-- 357 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQV-----------------PPQ-PQSAPQQAPT 402 FAP+A + T +Q+ P Q P+S P AP Sbjct: 358 --------------FAPLAASGCDTQSQIEHTDLHSDHQKAEAEKKPFQLPKSEPIAAPA 403 Query: 403 V-----PLPETTSQVLAARQQLQRVQGATKAKKSE--PAAATRARPVNNAALERLASV-- 453 V P + T + ++ + +Q VQ E P+ + P AA + A+ Sbjct: 404 VEKEAAPAKQDTVE-RSSEETVQSVQQQADVPPWEEMPSQVSVESPQTQAAQMQEATEPL 462 Query: 454 -TDRVQARPVPSALEKA------PAKKEAYRWKAT--TPVMQQKEVVATP-----KALKK 499 +VQ P P P EAY ++ + VM+ + VA+ + ++ Sbjct: 463 PVAKVQKAPAPEEYPHMDEEIPPPYFDEAYTYEDSHHADVMEVPQPVASAESEEEEGDEE 522 Query: 500 ALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSS 559 L+ PE + IER +Q+ L + A ++ E+ + L L Sbjct: 523 ELQFAPLPEFKTENWHSIIERFARKLGAAQM----LAQNAAWTSYDAEA-GLIMLSLTDE 577 Query: 560 QRHLNNRGAQQKLAEALSMLK--GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARES 617 + N+ K+ + LS G+ T D+ TP+ R+ I EE QA+E Sbjct: 578 AKATANKERLDKICQTLSEAYHLGNLRLQTEPWQDDKGWETPVMRRKHIQEEGRQQAQEL 637 Query: 618 IIADNNIQTLRRFFDAE 634 + AD Q + + F+A+ Sbjct: 638 LEADTTAQKILQTFEAQ 654 >UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YC05_9GAMM Length = 588 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 266/633 (42%), Positives = 364/633 (57%), Gaps = 53/633 (8%) Query: 18 VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCD 77 +VGQEHVL AL N L R+HHAYLF+GTRGVGKTSIAR+LAK LNC+ G+++ PCG C Sbjct: 1 MVGQEHVLKALINALDHNRLHHAYLFTGTRGVGKTSIARILAKCLNCDVGVSSEPCGQCS 60 Query: 78 NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFN 137 C I +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP GRFKVYLIDEVHMLS +SFN Sbjct: 61 ACLSISEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTAGRFKVYLIDEVHMLSTNSFN 120 Query: 138 ALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIA 197 ALLKTLEEPP HVKFLLATTDPQKLP TILSRCLQF+LK + E+I L+++L +E I Sbjct: 121 ALLKTLEEPPPHVKFLLATTDPQKLPATILSRCLQFNLKNMSPERIVVHLQNVLEQEMIT 180 Query: 198 HEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMV 257 +E AL LL R+A+GS+RDALSLTDQAI+ G G++ V +MLGT+D +VEA++ Sbjct: 181 YEEPALWLLGRSADGSMRDALSLTDQAISFGSGKLLEADVRSMLGTIDRSAVYEIVEALI 240 Query: 258 EANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELA 317 NG +V+A +N A ++ + L E+L LLHRIA+ Q P A N ++ ++ Sbjct: 241 AENGAQVLAAVNNMAEHAPDYLSALEELLMLLHRIAIAQAVPDATDNSFGD-GAKIIAMS 299 Query: 318 RTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSF-- 375 + D QL+YQ L GR++L APD R G EM LLR LAF P P++P +S Sbjct: 300 ALLTAEDTQLFYQLGLTGRRDLSLAPDLRSGFEMVLLRMLAFKPA---GIPQLPERSLTN 356 Query: 376 APVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAA 435 +PV+ A PQP P +Q ++ T S Sbjct: 357 SPVSVEA--------PQPVKKPDAG------------------VQSIKADTPVSFSSKLG 390 Query: 436 ATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPK 495 ++ VN+ L+ +VT + P+ A E+ P V Sbjct: 391 PAQSSVVNDIQLQVDGAVTKAIGEEPL-----HAVTVSESVAVPLAAPAPAPVPVAVLVD 445 Query: 496 ALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCL 554 + +L+ EK P L+ + + D W A +L +V +A + + +DNA+ L Sbjct: 446 DTEMSLD-EKGP-----LSLDQLRPDSWNALFERLGFGGVVGNIASHCILVDVTDNAMSL 499 Query: 555 HLRSSQRHLNNRGAQQKLAEALSMLKGS----TVELTIVEDDNPAVRTPLEWRQAIYEEK 610 L ++ L + ++ E L++ + +E+T + + PA+R + + E+ Sbjct: 500 QLDAANATLFSDSYTARIQEHLTVTLNTPVTVKIEVTPLSAETPALR-----KNRMQNER 554 Query: 611 LAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 A S+ D N+Q L FDA LDE S++P+ Sbjct: 555 REAALLSLKNDPNVQVLVSDFDAVLDEASVQPV 587 >UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 Tax=Burkholderia glumae BGR1 RepID=C5AFH6_BURGB Length = 861 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/361 (56%), Positives = 264/361 (73%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE +A EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVMHLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ ++G ++A+ +E A R + + L ++ GLLHRIA Q +PA Sbjct: 241 LGALDQTYMVRLLDAIASSDGPEILAIADEMALRSLSFSTALQDLAGLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEAA-DLRRFAEALSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFA 359 Query: 361 P 361 P Sbjct: 360 P 360 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/359 (57%), Positives = 265/359 (73%), Gaps = 1/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE IA EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD + L++A+ A+G +++A+ +E A R + + A L ++ LLHRIA Q +PA Sbjct: 241 LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEAA-DLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAF 358 >UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau subunits n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5P9_9GAMM Length = 820 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/365 (60%), Positives = 276/365 (75%), Gaps = 5/365 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F +VGQEHV AL N L+ R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQNFHQLVGQEHVKQALVNALTQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITATPCG C C +IE GR++DL+EIDAASRTKVEDTR++LDNVQYAP RGR+ Sbjct: 61 SLNCELGITATPCGQCSACLDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+L AL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLSALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL +L EE I E +L LLA+AA+GS+RDALSLTDQAIA +GQV+ V +M Sbjct: 181 PQIEQQLSFVLTEEQIHFEVASLALLAKAADGSMRDALSLTDQAIAQTNGQVNESQVKSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG +D A L+ ++V+ +G +++L+ + + +++L ++L L H + + QL P Sbjct: 241 LGLMDASWAKRLLVSIVDKDGAELLSLVADLVKQNANAKSVLDDLLSLTHLLLLTQLVPS 300 Query: 300 -AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 AA D A + +++++ P +Q+YYQ LL G+K+L +APD ++G+EM LLR LA Sbjct: 301 AAAFNEDEADF---IDAMSKSLSPEQVQVYYQLLLGGKKDLQWAPDEKLGLEMVLLRLLA 357 Query: 359 FHPRM 363 F P Sbjct: 358 FEPHF 362 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 1/127 (0%) Query: 517 AIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEAL 576 A ++D WA + Q+ L + Q AL+ + D V L + + Q+HL++ ++KL E+L Sbjct: 695 AHQQDAWANLIEQMQLGGRIRQFALHGLFSQQDQNVTLQVDAQQQHLDSAVMREKLTESL 754 Query: 577 SMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 S+ + L+I E N TP + +Q + + A+E I D Q R F A +D Sbjct: 755 SLALARDITLSI-EFVNAVTGTPYQIQQQLDSNRWYHAKEVIENDAVTQQFMRRFAAVID 813 Query: 637 EESIRPI 643 E SIR + Sbjct: 814 ENSIRAL 820 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 206/360 (57%), Positives = 263/360 (73%), Gaps = 5/360 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++ GQEHV AL N + GR+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCET G+T+ PCG C +C EI++GRFVDLIE+DAASRTKV+DTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVYLIDEVHMLS SFNALLKTLEEPPEHV FLLATTDPQKLPVT+LSRCLQFHLK ++ Sbjct: 121 YKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHME 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + I L +IL +E I E AL+L++R+AEGS+RDALSL DQAIA G G+V + + Sbjct: 181 EQTISKHLAYILQQESIDFETPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRT 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLGT+D + L+EA+ + + + E + +++ L E+L +H++A+ Q + Sbjct: 241 MLGTIDHQFMVKLLEALANKDSAEAIKAVAEMSHYPVDFADALKELLSRIHQVAIFQSTG 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L +E + A I D+QLYYQ L R++L +AP R G+EM LLR LAF Sbjct: 301 VLLDQAAPYVE----DFASKIASDDLQLYYQMGLHARRDLEWAPSPRQGLEMALLRMLAF 356 >UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q609A7_METCA Length = 547 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/377 (58%), Positives = 273/377 (72%), Gaps = 2/377 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ LARKWRP F +VVGQEHV+ AL + L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MLYQALARKWRPHNFTEVVGQEHVVKALTHALEAGRMHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE A PCG C CRE+++GRF+DLIE+DAASRTKVEDTRDLLDNVQYAP +GR+ Sbjct: 61 ALNCEDRQGANPCGRCLICREVDEGRFIDLIEVDAASRTKVEDTRDLLDNVQYAPNQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQK+PVT+LSRCLQF+LK L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQFNLKRLTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR Q+ IL E I EP A + LARAA+GS+RD LSL DQAIA G+++ VSAM Sbjct: 181 EQIRAQMAQILASESIDFEPAATKALARAAQGSMRDGLSLLDQAIAHCGGRLTNTGVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ + +EA+ E+ + ++A+ A +++ ++ ++L +LH+IA+ Q +P Sbjct: 241 LGTVSREPVYGALEALAESRADELLAVSATLAEFSPDYQDVVQQLLAILHQIAIAQFAPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D A R+ LAR + P D QLYYQ L G+K+L APD R G EM LLR LAF Sbjct: 301 AIRQDDEA--ERVLTLARCLTPEDTQLYYQIALQGQKDLQLAPDPRDGFEMLLLRMLAFR 358 Query: 361 PRMPLPEPEVPRQSFAP 377 P P + + AP Sbjct: 359 PHSAEAAPRIVPTAAAP 375 >UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderiales RepID=Q13Z80_BURXL Length = 957 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 201/361 (55%), Positives = 263/361 (72%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+TPCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LEHIL EE + ++ +AL+LLARAA+GS+RDALSLTDQAIA QV+ +AV M Sbjct: 181 GHIVSHLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ + +G V+++ +E A R + + L ++ LLHRIA Q +P+ Sbjct: 241 LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + +QL+YQ IGR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEAG-DLRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFE 359 Query: 361 P 361 P Sbjct: 360 P 360 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 209/401 (52%), Positives = 279/401 (69%), Gaps = 6/401 (1%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 QVLARKWRP+ F ++ GQEHV+ AL N L R+HHAYL +GTRGVGKT+IAR+LAK LN Sbjct: 5 QVLARKWRPRNFTELTGQEHVVRALTNALEQNRLHHAYLLTGTRGVGKTTIARILAKSLN 64 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CETGITATPCG C C +I+ G F+DL+E+DAAS T+V++ R+LL+N YAP GR+K+Y Sbjct: 65 CETGITATPCGTCTTCVQIDSGSFIDLVELDAASNTQVDNMRELLENALYAPTCGRYKIY 124 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTD QK+P+T+LSRCLQF+LK + QI Sbjct: 125 IIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPITVLSRCLQFNLKQIPQPQI 184 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L+ IL +E I + +LQL+ARAA+GS+RDALSL DQAIA G G++ +V MLG Sbjct: 185 TDHLKKILAQEKIPCDILSLQLVARAAQGSMRDALSLLDQAIAFGAGKIEEASVRDMLGI 244 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 +D L++A+ + NG ++++L +E AR + ++ L ++ +LHRIA+ Q P ALG Sbjct: 245 IDHSYLFDLLDALTQKNGLKLLSLADEMEARCLSFDCALQDLAVILHRIALAQAIPQALG 304 Query: 304 NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 363 D+ +R+ LA+ + P DIQL+YQ L GR +L APD G MTLLR L F Sbjct: 305 EDIPDY-IRINALAKILAPDDIQLFYQIALHGRGDLSLAPDEYAGFTMTLLRMLTF---- 359 Query: 364 PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 +PE V Q V+ ++ +V +PQ P P VP Sbjct: 360 -MPEDLVAHQQPPQVSSISIPQSVEVGHEPQPIPDITPPVP 399 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 3/158 (1%) Query: 487 QKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WK 545 Q ++ P++++ E + P++ + A+ + PW V QL L + + +A ++ K Sbjct: 372 QVSSISIPQSVEVGHEPQPIPDITPPVPADNSDL-PWPQLVQQLKLAGMAKMLAQHSEAK 430 Query: 546 EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQA 605 S + + L + +HL + Q K+ AL+ G V L + TP +Q Sbjct: 431 ILSADKIELCVPEVHKHLLEKKYQDKIQSALNTFFGKLVALDFFVGSITGL-TPAAIQQR 489 Query: 606 IYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 EEK AQA +I D +Q L FDA+L SI+PI Sbjct: 490 AEEEKQAQAIAAIEKDPVVQELIEQFDAKLIIPSIKPI 527 >UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 Tax=Gammaproteobacteria RepID=A1WTL4_HALHL Length = 554 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/371 (59%), Positives = 269/371 (72%), Gaps = 1/371 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ LARKWRP+ F DV GQEHVL ALAN L+ GR+HHAYLFSGTRGVGKT++AR+LAK Sbjct: 1 MTYQALARKWRPRRFEDVAGQEHVLRALANALADGRLHHAYLFSGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA PCG CD+CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGRF Sbjct: 61 CLNCEHGITAEPCGTCDSCRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQFHL+ L Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFHLRRLSS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 IR +L + EE + + A LARAA+GSLRDALSL DQA+A G+G V+AM Sbjct: 181 TLIRDRLLALAEEEGVTVDAGAAARLARAADGSLRDALSLLDQALAFGEGAARDDEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG ++ L ++ A+ + +G ++ A +++ L E++ +H +A+ Q P+ Sbjct: 241 LGAIERRHVLEVLTALADGDGAALVTAARHMAEVAADFDEALAELVATVHSLALAQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+G+D + R+ LA I D+QLYYQ + R++LPYAPD G EM LLR AF Sbjct: 301 AIGDDEPERD-RLLALAERIDAEDLQLYYQIGVNARRDLPYAPDPATGFEMALLRMHAFR 359 Query: 361 PRMPLPEPEVP 371 P P P Sbjct: 360 PAEGAPRVAAP 370 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 217/371 (58%), Positives = 271/371 (73%), Gaps = 7/371 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I +E AL L +AA+GS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYEEPALLSLGKAAQGSMRDALSLTDQAIAFGSEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALATVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 SYDET-------QQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PRMPLPEPEVP 371 P+ L + + P Sbjct: 354 PKGVLVQGDSP 364 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 215/362 (59%), Positives = 267/362 (73%), Gaps = 7/362 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I ++ AL L +AAEGS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYDEPALLSLGKAAEGSMRDALSLTDQAIAFGGEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALASVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 SYDET-------QQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PR 362 P+ Sbjct: 354 PK 355 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/411 (55%), Positives = 273/411 (66%), Gaps = 14/411 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+QVLARKWRP F D+VGQ HV+ ALAN LS R+HHAYLF+GTRGVGKT+IAR+LA+ Sbjct: 1 MSHQVLARKWRPGRFEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C +C EI +GR +DLIE+DAASRT+V+DTR+LLDNV YAP GRF Sbjct: 61 CLNCETGITATPCGECRSCVEIAEGRHLDLIEVDAASRTRVDDTRELLDNVSYAPTAGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E + EP AL L AAEGS+RDALSLTDQAIA G +++ M Sbjct: 181 ALIAEHLTRILEAEGLQAEPGALLRLGEAAEGSMRDALSLTDQAIAYGGDRLTESDACDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L + L++A +G +M + E G +W LL E+ L+HR+A+ QL Sbjct: 241 LGLLPRTRLTGLLDAAFAGDGPGLMQGLQELKGLGPDWSRLLDELAALVHRVAVEQLVRG 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 G D A E RE A I +QL YQ L+ G ++LP+APD +MGVEMTLLR LAF Sbjct: 301 EGGAEDDDAAERWARETAARIDAETLQLTYQILIHGARDLPWAPDAQMGVEMTLLRLLAF 360 Query: 360 HPRMPLPEP-EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 P P V RQ P P++ P P P+ T Sbjct: 361 RPEGPGEGAVSVERQGGTPAT------------APRTGPSADPATARPDAT 399 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 292/681 (42%), Positives = 389/681 (57%), Gaps = 86/681 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FAD+VGQEHV+ AL N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 22 MTYQVLARKWRPKRFADLVGQEHVVRALTNALAGERLHHAYLLTGTRGVGKTTIARILAK 81 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GR+ Sbjct: 82 SLNCEAGVGAEPCGECSACRQIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRY 141 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 142 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 201 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L +L+ E +++E AL LL RAA GS+RDALSL DQAIA G G+V V AM Sbjct: 202 QQVAGHLARVLDVEQVSYEAPALALLGRAAAGSMRDALSLLDQAIAYGVGKVEEGGVRAM 261 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+EA+ EA+G R++A A RG+ +++ L E+ LL +IA+ Q PA Sbjct: 262 LGAVDRAYLYTLLEALAEADGPRLIAEAKALAERGVGFDSALGELALLLQQIALAQTVPA 321 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D E + LA+ I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 322 AITGDDPDAEAVL-ALAQLIAPEDVQLYYQIAIHGRKDLALAPDEHAGFTMTLLRMLAFH 380 Query: 361 P-RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P PR + + P+P S P AP+ P E S AA+ L Sbjct: 381 PLNAPGDSTPTPRAAASR-------------PEPASRPA-APSEPSVEGAS---AAKALL 423 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 R+ G A +S PA + P + P P+ +E AP A Sbjct: 424 ARLSGRNGAARSAPATPDESAPAD---------------PEPEPARVEPAPRPVPAAPAV 468 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA---------------------- 517 AT P TP +++ A E P+ A +AAEA Sbjct: 469 ATQPE------PGTPPSVELA-PWEDAPDDAGDVAAEAWQAGASADDSAAEAWSEPAAPP 521 Query: 518 ------IERDPWAAQVSQLSLPK-----LVEQVALNAWKEESDNAVCLHLRSSQRHLNNR 566 + WAA V++L L L +W + L + S RHL R Sbjct: 522 AAAEPYVFDGDWAALVAELGARMGASRMLAHNAVLKSW---DGRRLQLAVPESFRHLATR 578 Query: 567 GAQQKLAEALSMLKGSTVELTI-VED---DNPAVRTPLEWRQAIYEEKLAQARESIIADN 622 Q+KL AL+ G EL++ VE+ + PA+R +RQ E+LA AR ++ D Sbjct: 579 DYQEKLKAALAERFGQAPELSVSVEELGMETPAMRE-ARFRQ----EQLAAARVNLENDP 633 Query: 623 NIQTLRRFFDAELDEESIRPI 643 ++ L F+A L E+I+P+ Sbjct: 634 VVRQLVGEFNAVLLTETIQPV 654 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 206/361 (57%), Positives = 264/361 (73%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP++F ++VGQEHVL AL N L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MTYQVLARKWRPKSFGEMVGQEHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GR VDL+E+DAASRTKVEDTR+LL+NVQYAP R R+ Sbjct: 61 CLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFNLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L ++L E ++ E AL LL RAA GS+RDALSLTDQAIA G G++ V +M Sbjct: 181 EQIVGHLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETDVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D L+E + + ++A++ A ++E E++ ++HR+A+ Q P Sbjct: 241 LGSVDLSFVYQLLEGVAAGDPAELLAIVGRMAEHAPDFEGSTDELISMVHRVAVAQAVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N + R+ LA++I D QL+YQ + G++++ APD R G EM LLR LAF Sbjct: 301 AIDNSWGDAD-RVAALAQSIGAEDAQLFYQIAINGKRDMALAPDPRSGFEMLLLRMLAFR 359 Query: 361 P 361 P Sbjct: 360 P 360 >UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Coxiella burnetii RepID=B6J935_COXB1 Length = 509 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 216/391 (55%), Positives = 280/391 (71%), Gaps = 6/391 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++QVLARKWRP+ F +V+GQ V+ AL+N L +HHAYLF+GTRGVGKT+I+R+LAK Sbjct: 1 MAHQVLARKWRPRCFQEVIGQAPVVRALSNALDQQYLHHAYLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PC C+NCREI++GRF DL E+DAASRTKVEDTR+LLDN+ YAP +GRF Sbjct: 61 CLNCEKGVSANPCNDCENCREIDEGRFPDLFEVDAASRTKVEDTRELLDNIPYAPTKGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKF+LATTD KLPVT+LSRCLQFHL L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPSHVKFILATTDHHKLPVTVLSRCLQFHLAQLPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +H+L EE++ E AL LLARAA GS+RDALSL DQ+IA G+G+V V M Sbjct: 181 LQIAAHCQHLLKEENVEFENAALDLLARAANGSVRDALSLLDQSIAYGNGKVLIADVKTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ ++EA+ G+R++ + +G+++ L ++L LLH+IA++Q P Sbjct: 241 LGTIEPLLLFDILEALAAKAGDRLLGCVTRLVEQGVDFSNALADLLSLLHQIAIIQTVPE 300 Query: 301 AL-GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL ND ++R+LA+ + D+QL+YQ LIG+++L Y+P + G EMTLLR LAF Sbjct: 301 ALIENDSE----QLRQLAKLLDREDVQLFYQIGLIGQRDLAYSPTPQTGFEMTLLRMLAF 356 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVP 390 +P PE + A V PT + T P Sbjct: 357 YPSAANAIPETESKE-AVVTPTPKSSETSWP 386 >UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 Tax=Acidithiobacillus RepID=B5EJD9_ACIF5 Length = 572 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/360 (58%), Positives = 260/360 (72%), Gaps = 7/360 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y LAR+WRPQ F D VGQE V++AL + L GRIHHA+LF+GTRGVGKT++ARLLAK Sbjct: 3 AYLALARRWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLAKC 62 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNCE G+++ PCG C CR I G FVDL+E+DAASRT+V++TRDLLDNVQYAP GR+K Sbjct: 63 LNCERGVSSNPCGECSACRSIAAGNFVDLLEVDAASRTRVDETRDLLDNVQYAPTAGRYK 122 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+T+LSRCLQF+L+ LDV Sbjct: 123 AYLIDEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLDVP 182 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 QI+ +L I++ E + E ALQ+L+RAA+GSLRDALSL DQAI G G V V AML Sbjct: 183 QIQGRLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLAML 242 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G DD L L+ A+V+ + +V A++ + ARG++ LL ++ LHRIA+ Q PA Sbjct: 243 GRSGDDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLPAD 302 Query: 302 LGNDM--AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 +D A + LR R I P +Q +Y LL R++ PD RM +EM LR L+F Sbjct: 303 PDDDGAEAVVHLRGR-----ISPLTLQSWYFLLLSARRDFALYPDDRMALEMAFLRVLSF 357 >UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYG2_9GAMM Length = 672 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 203/361 (56%), Positives = 269/361 (74%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQVLARKWRP F ++VGQ+HVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 84 MGYQVLARKWRPGNFQEMVGQQHVLRALVNALDNDRLHHAYLFTGTRGVGKTTVARILAK 143 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+++TPCG CD+C EI +GR VDL+E+DAASRTKVEDTR+LL+NV YAP R RF Sbjct: 144 CLNCDQGVSSTPCGTCDSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVLYAPTRSRF 203 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP H KFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 204 KIYLIDEVHMLSGHSFNALLKTLEEPPPHAKFLLATTDPQKLPATVLSRCLQFNLKNMVP 263 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L +L EE +A + +L LLARAAEGS+RDALSLTDQAI GDG ++ V AM Sbjct: 264 EEIVAHLGKVLEEESVAFDNGSLALLARAAEGSMRDALSLTDQAIGFGDGGLAESDVRAM 323 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L +++A+++ + + ++A+I + A+ ++ A L ++ +LH++ + Q P Sbjct: 324 LGTVDRARVLDVLDAILDNDPKTLLAVIEQIASHAPDYVATLDDLASVLHQVTIAQWVPD 383 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + A+ R+ ++A + ++QL+YQ GR E+ +PD R +EM LLR +AF Sbjct: 384 A-ADPTASQSERIAKVAASTTVDEVQLFYQFAAAGRPEVQRSPDPRAALEMVLLRMIAFR 442 Query: 361 P 361 P Sbjct: 443 P 443 >UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobacteria RepID=Q47HW9_DECAR Length = 537 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 231/472 (48%), Positives = 301/472 (63%), Gaps = 6/472 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+ +VGQEHV+ AL + LS R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C C+EI+ GRFVDL+E+DAA+ T+V++ R LL+N YAP RGRF Sbjct: 61 SLNCETGITATPCGTCSACQEIDSGRFVDLLEVDAATNTRVDEMRQLLENAVYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYVIDEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L HIL E I + AL L+AR+A GS+RDALSL DQAIA G G+V V +M Sbjct: 181 LAITGHLGHILQAEGIPFDQPALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D D +++EA+ A ++ + + R + + A L E+ LL R+ + Q P Sbjct: 241 LGTVDQDYLFTILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D + R++ LA + P +QL YQ + GR EL APD G MTLLR F Sbjct: 301 AIDDDEPERD-RLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYAGFVMTLLRLYTFR 359 Query: 361 PRM--PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + VPR + A P AV + S P+ LP S + Q Sbjct: 360 PSTVADVVGAAVPRVNAAGAMPKAVRATPATQSRGDSIPEPVIIPKLPPIASGEMDWHQI 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVN-NAALERLASVTDRVQARPVPSALEKA 469 + + + A+ E A R ++ N L RL+ +Q RP P L++A Sbjct: 420 VASLSLSGLAR--ELAQNCELRQLSENQCLLRLSPAQGHLQMRPNPDRLQQA 469 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 3/157 (1%) Query: 488 KEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKE 546 K V ATP + + P + KL A W V+ LSL L ++A N ++ Sbjct: 382 KAVRATPATQSRG-DSIPEPVIIPKLPPIASGEMDWHQIVASLSLSGLARELAQNCELRQ 440 Query: 547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAI 606 S+N L L +Q HL R +L +ALS G +++ I N V TP E Sbjct: 441 LSENQCLLRLSPAQGHLQMRPNPDRLQQALSDFFGRPLQVRIELAQNENV-TPAETVGRQ 499 Query: 607 YEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +E+ +A +I D ++ + FDA L E SI+PI Sbjct: 500 RQEQQERAATAIAQDTFVRDVIESFDASLVESSIKPI 536 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust. Identities = 212/418 (50%), Positives = 277/418 (66%), Gaps = 22/418 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPKLFEALVGQEHVVRALTNALEQQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCGVC C +I++GRFVD++E+DAAS T+V+ R+LLDN QYAP GRF Sbjct: 61 SLNCETGITAHPCGVCSACVDIDRGRFVDMLEVDAASNTQVDSMRELLDNAQYAPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLSR +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+L+ + Sbjct: 121 KVYIIDEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVTVLSRCLQFNLRQMST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L+ +L +E+I + ALQL++RAA GS+RDALSL DQAIA G +V+ V AM Sbjct: 181 PAITSHLQEVLAKENIPSDSIALQLISRAANGSMRDALSLLDQAIAYGGNRVNESEVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L++A++ +G +MA R + ++ L ++ LLH +A+ Q P Sbjct: 241 LGAIDQSYLYGLLDALIAQDGPSLMAQAKSMEERSLSFDTALADLAQLLHHLAVAQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF- 359 ++ D+ + +LA +P +QLYYQ L+GR++L APD G M LLR LAF Sbjct: 301 SIPLDLPE-RTALLDLATKLPADKVQLYYQIALLGRRDLGLAPDEFAGFTMCLLRMLAFS 359 Query: 360 --HPRMPLPEPEVPRQSFAPVAP----------------TAVMTPTQV--PPQPQSAP 397 P P P S P+A +A +P + PP PQ+ P Sbjct: 360 NESTSKPAPTAPAPSGSDRPIAQHAGSAASALAAATMARSATPSPAAIASPPTPQAKP 417 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 209/360 (58%), Positives = 264/360 (73%), Gaps = 1/360 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG TA PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GRF Sbjct: 61 SLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTMGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E I +E AL LL RAA GS+RDA SL DQAIA G G+V V AM Sbjct: 181 QQVSSHLAHMLDIEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L++A+ ++G +MA + A RG+ +++ L E+ LL ++A+ Q PA Sbjct: 241 LGAVDRRYLFTLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL D + + LA I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 301 ALAADEPERDT-LFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFH 359 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust. Identities = 233/488 (47%), Positives = 301/488 (61%), Gaps = 47/488 (9%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL++ L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFNELVGQNHVSRALSSALESGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGVTSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E IA + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITKHLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + E+V L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPELG 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 I ++ +L++ I D+QLYYQ GR +L A + G EM +LR LAF P Sbjct: 302 LKYSEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQLAVTQEQGFEMCVLRLLAFRPL 361 Query: 363 MP----LPEP-------EVPRQSFAPVA----PTAVMTPTQVPPQP-------------Q 394 P + EP EV S A A P + + P +V QP + Sbjct: 362 APNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEPEPEPE 421 Query: 395 SAPQQAPTVPLP-------------ETTSQVL------AARQQLQRVQGATKAKKSEPAA 435 P Q V P + T VL Q+L +VQ T+ K+ EP Sbjct: 422 PQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQIEPEP 481 Query: 436 ATRARPVN 443 A+ A P+ Sbjct: 482 ASTAEPIG 489 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 204/373 (54%), Positives = 263/373 (70%), Gaps = 4/373 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F +VGQEHV+ AL + L+ GR+HHA+LF+GTRGVGKT+I+R+LAK Sbjct: 1 MSYQVLARKWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCG+CD CR I+ RF D +E+DAAS VE+ LLD YAP +GRF Sbjct: 61 ALNCETGITAEPCGICDACRAIDADRFPDYVEMDAASNRGVEEMAALLDKAVYAPVQGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E +A EP AL+ LA+AA GS+RDALSL DQAIA G G+V + VS M Sbjct: 181 GHIVDHLTRILQAEEVAFEPGALRHLAKAASGSMRDALSLLDQAIAHGAGRVEEEQVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ DD ++++A+ + ++A+ + AR + ++A L + L+HR+A+ Q +PA Sbjct: 241 LGTVGDDHLYAVLDALAAGDVPALLAVADGMEARSLSFDAALQALATLVHRVALAQYAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +++ R+ +QL YQ + GR ELP APD G MTLLR AF Sbjct: 301 AIADELE--RARILGYVERFDAEFLQLAYQVAVHGRDELPLAPDDYTGFTMTLLRLHAFR 358 Query: 361 PRMP--LPEPEVP 371 P P L P VP Sbjct: 359 PEQPAALGGPGVP 371 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%) Query: 523 WAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHL--NNRGAQQKLAEALSML 579 W + L L LV ++A + W E D + L L ++ RHL NRGA ++L + L Sbjct: 594 WRGLIRALGLGGLVRELAQHCEWVECGDGVLQLRLSTAHRHLLDMNRGAVERLQDVLCAA 653 Query: 580 KGSTVELTIVEDD----NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 G T+ + I D PA R +E RQ + E +A ++ AD ++ L FDA L Sbjct: 654 LGRTLAVRIAIGDISGQTPAQRDAIE-RQVRHAEAVA----ALEADPFVRELIERFDATL 708 Query: 636 DEESIRPI 643 E +++P+ Sbjct: 709 VENTVKPL 716 >UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=Q6FAW7_ACIAD Length = 711 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/359 (56%), Positives = 255/359 (71%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL + L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFIELVGQNHVSRALTSALERGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETGIT+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGITSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E I + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITSHLTTILAKEQIEADKDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + RV L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAIHQNQTARVSQLLMQFRQQALDVSLVLDQLISTLHELALLQYLPELS 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 I ++ +LA+ + D+QLYYQ GR EL + + G EM +LR LAF P Sbjct: 302 LKYSEEINQKILKLAKIVSAQDLQLYYQIACKGRSELQLSVTQEQGFEMCVLRLLAFRP 360 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/459 (49%), Positives = 299/459 (65%), Gaps = 30/459 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L+K L Sbjct: 5 YQVLARKYRPKNFHELVGQSHVSKALINAIDHNRLHHAYLFTGTRGVGKTTIARILSKCL 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+TPCGVC +C I+QGRF+DLIEIDAASRTKVEDTR+L+DNV YAP +GR+KV Sbjct: 65 NCETGVTSTPCGVCSSCVAIDQGRFIDLIEIDAASRTKVEDTRELIDNVPYAPTQGRYKV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L + Sbjct: 125 YLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQQA 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + + ++L +E+I AL LA AA+GS+RDALSLTDQAIA G G+++ + V+ MLG Sbjct: 185 LSDHIANLLTQENIDFTQPALWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVNDMLG 244 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP-AA 301 +D +SL+ + + N + A I + A+ ++ ++ + LLH+IAMVQL P + Sbjct: 245 LIDSADLISLLLDIYQGNAPALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLLPNVS 304 Query: 302 LG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L ND+ A ++ LA I P +QLYYQ ++ GR+++ A +EM LLR LAF Sbjct: 305 LNVNDLQAQQITA--LAAQIGPDVLQLYYQIVIQGREQIKLANTPLQALEMCLLRLLAFR 362 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQ--VPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + L E VA + TP QP S QAP P + L Sbjct: 363 P-LALNE----------VAVASSNTPAHKASSDQPASIEMQAPN-PHADQAEDYL----- 405 Query: 419 LQRVQGATKAKKSEPAAATRARP----VNNAALERLASV 453 + A A +E A T P VN+A + A++ Sbjct: 406 ---TEQALSATSTESMADTNIEPQSPNVNDADINNTANI 441 >UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 Tax=Legionella RepID=Q5X1E1_LEGPA Length = 556 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/419 (51%), Positives = 277/419 (66%), Gaps = 11/419 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+TF+ +VGQEH+ AL N L+ R+HHAYLF+GTRGVGKTS+AR+LAK Sbjct: 1 MSYLALARKWRPRTFSQLVGQEHINKALINALNQQRLHHAYLFTGTRGVGKTSVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC CD C IEQGR++DLIEID AS+T+VEDTRDLLDN+QYAP GRF Sbjct: 61 ALNCEKGITSEPCLHCDTCVAIEQGRYIDLIEIDGASKTRVEDTRDLLDNIQYAPTNGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+HSFNALLKTLEEPP HVKF+LATTDPQKLPVT+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSQHSFNALLKTLEEPPSHVKFILATTDPQKLPVTVLSRCLQFNLKHLPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I QL+ IL EE + E +AL +LA+AA GS+RDALSL DQAI S + ++ V + Sbjct: 181 ELINQQLQLILQEERLDFEIQALDILAQAARGSMRDALSLLDQAITSCETKLLASDVKIL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D AL L++A+ + ++ L + A G ++ +L EML LH+I + Q Sbjct: 241 LGHTQQDYALLLLQALAKQEAPTMLVLSQQIIAEGGNFQYVLDEMLNYLHQITIYQ---- 296 Query: 301 ALGNDMAAI--ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 LG++ I + ++ELA+ D QL+YQ + GR+E+ AP +G MT+LR Sbjct: 297 CLGDNNPLISPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYT 356 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 F P + P + + + T P P +P+ + T ++A Q Sbjct: 357 FKPASHVTTPPLAFEQNNKTCSLIIDDNT-----PAQNPIGIEPIPVTKATGNIVAYHQ 410 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/361 (55%), Positives = 265/361 (73%), Gaps = 1/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+D+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 30 MTYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAK 89 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PCGVC +C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 90 SLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 149 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+PVT+LSRCLQF L+ + Sbjct: 150 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA 209 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E IA++P ALQLL RAA GS+RDALSL DQAIA G G+V+ V M Sbjct: 210 QQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQM 269 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+ +V +GE ++A E AA + ++ L E+ LL ++A++Q P+ Sbjct: 270 IGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPS 329 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +D ++ R LA+TI IQLYYQ + G+++L APD G MTLLR LAF Sbjct: 330 ALAHDDPDSDILHR-LAQTISGEQIQLYYQIAVHGKRDLGLAPDEYAGFMMTLLRMLAFA 388 Query: 361 P 361 P Sbjct: 389 P 389 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/370 (54%), Positives = 262/370 (70%), Gaps = 11/370 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+ FA++VGQEHV+ AL+N L GR+HHA+LF+GTRGVGKT+IAR+ AK Sbjct: 100 MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK 159 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG +A PCG C C +I+ GR++DL+EIDAAS T V+D R++++N QY P+RG+F Sbjct: 160 SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF 219 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ +FNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK LD Sbjct: 220 KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE 279 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI+ Q+ IL E I +P A+ L++AA+GSLRD LSL DQAIA G + V M Sbjct: 280 DQIQGQMTRILAAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM 339 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D Q ++++A+ + +G +++ ++ A +W +L + LHRI + QL P+ Sbjct: 340 LGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS 399 Query: 301 AL----GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 G D ++R P +QL+YQ L GR++L AP R G EM +LR Sbjct: 400 VAFVGDGIDPTGFAAQLR-------PEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRM 452 Query: 357 LAFHPRMPLP 366 LAF P +P Sbjct: 453 LAFRPAAAVP 462 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/366 (54%), Positives = 257/366 (70%), Gaps = 6/366 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC GITA PCG C C EI+ GRFVD IE+DAAS V++ LLD YAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+HIL +E I+H+ AL+LLA+AA GS+RDALSLTDQAIA GQVS + Sbjct: 181 KQMPPGHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG +D + L++A+ +G ++ + + A R + + L ++ LLH++A+ Sbjct: 241 AVRGMLGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PA++ ++ E +R LAR + QL+YQ +GR EL APD G MTLLR Sbjct: 301 QAVPASVQDEWPEAE-DVRRLARQFDAQETQLFYQIANLGRSELALAPDEYAGFTMTLLR 359 Query: 356 ALAFHP 361 LAF P Sbjct: 360 MLAFRP 365 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/362 (56%), Positives = 260/362 (71%), Gaps = 4/362 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F VVGQEHV+ AL NGL GR+HHA+LF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRDFTQVVGQEHVVRALTNGLDKGRLHHAFLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+ +TPCG C NC+ I+ G FVDLIE+DAASRT V+DTR+LL+NV YAP+RG + Sbjct: 61 SLNCKEGVRSTPCGKCQNCQAIDGGNFVDLIEVDAASRTGVDDTRELLENVHYAPSRGHY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHM S SFNALLKTLEEPP H+KFLLATT+P+KLPVT+LSRCLQF+L+ + Sbjct: 121 KVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L IL E I E AL L+ARAAEGS+RDALSL DQAI G GQV V M Sbjct: 181 KAIAEHLNSILEAEEIPSESYALTLIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG+++ L++A++ NG+ ++ + E A ++ ++L ++L LL R+A+ QL+P Sbjct: 241 LGSIEQGDLFILLDALLAGNGQGLIEKVREICAYSVDISSILADLLHLLQRLALYQLAPD 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + D I LA P ++QL+YQ LIG ++L YAPD EM LLR L F Sbjct: 301 TVDDIDERGI---FSSLAARTTPEEVQLFYQIGLIGSRDLTYAPDHHTAFEMILLRMLCF 357 Query: 360 HP 361 P Sbjct: 358 RP 359 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 18/133 (13%) Query: 521 DPWAAQVSQLSLPKLVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 D W V+QL L + Q+A N A + + + L L S +L+++ A+++L +AL Sbjct: 399 DHWPGLVTQLKLTAIARQLAENCALERREEGIIYLQLAPSMANLHSKRAEERLQQALEEY 458 Query: 580 KGSTVELTI------VEDDNPAVRTPLE---WRQAIYEEKLAQARESIIADNNIQTLRRF 630 G ++L I + D A R E W+QA A ESI D NI+ L Sbjct: 459 YGEAIQLIIRIADSTLGTDTVASRRKQEDATWQQA--------AVESIQNDANIKALSET 510 Query: 631 FDAELDEESIRPI 643 F+A L +S+RP+ Sbjct: 511 FNARLPLDSVRPL 523 >UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QAW7_PSYCK Length = 685 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/382 (53%), Positives = 268/382 (70%), Gaps = 7/382 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L+K L Sbjct: 5 YQVLARKYRPKNFHELIGQTHVSQALINAIDYNRLHHAYLFTGTRGVGKTTIARILSKCL 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+TGIT+TPCGVCDNC I+QGRF+DLIEIDAASRTKVEDTR+LLDNV YAP++GR+KV Sbjct: 65 NCDTGITSTPCGVCDNCVAIDQGRFIDLIEIDAASRTKVEDTRELLDNVPYAPSQGRYKV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 125 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPITIISRCLQFVLRPLSQSL 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ++L +E + + AL LA AA+GS+RDALSLTDQAIA G G + V++MLG Sbjct: 185 LSEHLANVLTQEQVGYTQPALWQLASAAKGSVRDALSLTDQAIAFGQGALDDVTVNSMLG 244 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D +SL+ + + V A I + A+ ++ ++ + LLH++A+ QL P Sbjct: 245 LIDAADLVSLITDIYNHDKPAVAAHIEQMRAQMVDASSMFDGLAELLHQLALCQLLPEVA 304 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 N A + +LA+ + P +QLYY+ ++ R+ + A +EM +LR LAF Sbjct: 305 LNVNEAQAQHIDQLAQHMSPDVLQLYYEIVVQAREGVKLASTPMQALEMCILRLLAFR-- 362 Query: 363 MPLPEPEVPRQSFAPVAPTAVM 384 PLP E+ A V + VM Sbjct: 363 -PLPVDEI----LANVLDSTVM 379 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 210/374 (56%), Positives = 269/374 (71%), Gaps = 3/374 (0%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LARKWRP+ FAD+ GQEHV+ AL+N L+ GR+HHAYL +GTRGVGKT++AR+LAK LNCE Sbjct: 15 LARKWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNCE 74 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 +G++ATPCG C C +I+ GRFVDL+E+DAAS T V++ R++LDN QYAP GR+KVY+I Sbjct: 75 SGVSATPCGTCSACTQIDAGRFVDLLELDAASNTGVDNMREVLDNAQYAPTVGRYKVYII 134 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHMLS+ +FN++LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + + Sbjct: 135 DEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVAG 194 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 L +L +E + EP AL LLARAA GS+RDALSLTDQAIA G G++ AV AMLGT+ Sbjct: 195 HLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAMLGTVR 254 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGND 305 D L++A+ +G+ +M A RGI ++A L ++ LL ++A+V +P A+ D Sbjct: 255 RDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQLALVLHAPGAV-ED 313 Query: 306 MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPL 365 A E R R A + +QLYYQ L GR++LPYAPD G MTLLR LAF P Sbjct: 314 GADAE-RTRAAAEKLDAETVQLYYQIALNGRRDLPYAPDEFSGFCMTLLRMLAFAPATD- 371 Query: 366 PEPEVPRQSFAPVA 379 P P P APVA Sbjct: 372 PTPRSPGGGRAPVA 385 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/362 (57%), Positives = 268/362 (74%), Gaps = 1/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPRRFADLVGQEHVVRALSNALAGQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++++N QYAP GR+ Sbjct: 61 SLNCERGVGAEPCGECAACRQIDAGRFVDLLEIDAASNTGIDNIREVIENAQYAPTAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFALRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L E I E AL LLARAA GS+RDALSL DQAIA G+G V V AM Sbjct: 181 QQVSGHLAHVLATEGIEFESPALALLARAASGSMRDALSLLDQAIAYGEGVVREDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+ A+ + +G V+ E AARGI ++A L E+ L ++IA++Q P Sbjct: 241 LGAVDRRYLFTLLAALADGDGAAVLDEARELAARGIGFDAALEELAQLFYQIALMQAVPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D E + LA ++ P D+QLYYQ + G ++LP APD ++G M LLR LAFH Sbjct: 301 AIADDEPEREA-LAALAGSMAPEDVQLYYQMAVQGGRDLPLAPDEQLGFNMALLRMLAFH 359 Query: 361 PR 362 P+ Sbjct: 360 PQ 361 >UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax=Betaproteobacteria RepID=A6T0H3_JANMA Length = 673 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 200/366 (54%), Positives = 259/366 (70%), Gaps = 6/366 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP++F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 NC GIT+TPCGVC+ C I+ GRFVD IE+DAAS V++ LL+ YAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 + RFKVY+IDEVHML+ H+FN++LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L++IL +E+I E AL+LLA+ A GS+RDALSLTDQAIA G+V+ Sbjct: 181 KQMPPGHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLD 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG LD + L++A+ E +G ++A+ +E A R + + A L ++ LLHR+A+ Sbjct: 241 AVQGMLGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PAA+ D+ MR LA +IQL+YQ + GR EL APD G MTLLR Sbjct: 301 QTVPAAVPEDLPEYADVMR-LAGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLR 359 Query: 356 ALAFHP 361 LAF P Sbjct: 360 MLAFRP 365 >UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxalobacter formigenes RepID=C3XBH9_OXAFO Length = 604 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 254/661 (38%), Positives = 358/661 (54%), Gaps = 75/661 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F ++VGQ+HV+ AL++ L R+HHAYLF+GTRG+GKT+++R+LAK Sbjct: 1 MSYLVLARKYRPKNFENIVGQDHVVRALSHALESQRLHHAYLFTGTRGIGKTTLSRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA+PCG+C+ C+ I+ RFVD +E+DAAS + D LL+ YAP RF Sbjct: 61 SLNCEKGITASPCGICEACKAIDSDRFVDYVEMDAASNRGIADMLQLLEQAVYAPTAARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNA+LKTLEEPPE+VKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYMIDEVHMLTSQAFNAMLKTLEEPPEYVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E+I E AL+LLA+ A+GS+RDALSL DQAIA G V+ +AV M Sbjct: 181 SHIVDHLSRILELENIPFEKPALRLLAQGAQGSMRDALSLADQAIAYTAGHVTDEAVQDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++ + +G ++ + +E A R + + L ++ LL +IAM+Q P Sbjct: 241 LGALDQTYLIRLLDHLANRDGTSLLKVADEMAFRSLSYSTALQDLGLLLQKIAMIQSVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +D+A + + LA P ++QLYYQ + GR EL APD G MTLLR LAF Sbjct: 301 YPLDDIADSD-NLSRLAAIFSPEELQLYYQIAIHGRNELGLAPDEYAGFSMTLLRMLAF- 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP----QPQSAPQQAPTVPL----------P 406 P+ +S + + TP P + Q+ Q+ P+ P+ P Sbjct: 359 ------SPDKGNRSIPQIVSKSERTPANRPKTDSGKGQAVEQKVPSSPVVEKIPVPEKKP 412 Query: 407 ETTSQVLA--ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS 464 E T + + QG AK E A AL +++ + A P Sbjct: 413 EETVSAIPPWVDDESFSNQGGQTAKSPEVKKNESAPVTEVVAL----AMSAEMPAAPADV 468 Query: 465 ALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWA 524 ++K P + W PELAA L P Sbjct: 469 PVKKNPGEGS---WNGN------------------------WPELAAVL--------PVR 493 Query: 525 AQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTV 584 V QL+ +Q L W E+ D+A LHL+S L +L E L+ G V Sbjct: 494 GMVQQLA-----QQTELVHW-EKKDSACVLHLKSPIATLCTPNNINRLTEVLAEHFGQPV 547 Query: 585 ELT--IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 ++T I + + A + +E R E+ QA E+I D ++++ F + E S++P Sbjct: 548 KITTEIGKVEETANQNAIEARA----ERQRQAEEAITNDPYVKSVIAEFGGHIVEGSVKP 603 Query: 643 I 643 + Sbjct: 604 V 604 >UniRef50_Q89A95 DNA polymerase III subunit gamma n=42 Tax=Enterobacteriaceae RepID=DPO3X_BUCBP Length = 370 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 182/365 (49%), Positives = 272/365 (74%), Gaps = 3/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y +LA+KWRPQTF DV+GQ+++++A++N L LGRIHHA+LF G RG GKT+IAR+LAK Sbjct: 1 MNYHILAKKWRPQTFNDVIGQQYIVSAISNSLLLGRIHHAWLFFGIRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GI+ PC C NC E+EQG F+DL E+DAASRTKVED ++LLDN++Y P++GRF Sbjct: 61 SLNCKLGISPNPCRKCSNCVEVEQGNFIDLYEVDAASRTKVEDMKELLDNIRYLPSKGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLSR+SFN LLK +EEPP+H+KF+LATT+ +K+P TILSRCLQF LK +++ Sbjct: 121 KIYLIDEVHMLSRYSFNFLLKNIEEPPQHIKFILATTNLEKIPDTILSRCLQFQLKPINL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I + +IL++E+I +E +AL L+++ +EGSLRDA++LT+Q I+ G G ++ + V Sbjct: 181 NEIVACISNILHKENITYEIKALSLISQKSEGSLRDAITLTEQMISMGKGNITEKIVRKT 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L +DQ L ++ ++ + + ++ + I +E +LVE+L LLH+I+++++ P+ Sbjct: 241 LGMLYEDQILYILTTLLNKDLKNLVLCFKYISDTHINFENILVEILQLLHQISIIKIIPS 300 Query: 301 ALGNDMAA---IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 ND ++ ++++A DI LYYQT L+G+KEL APD+++ +EMTLLR Sbjct: 301 IKLNDTKYSKNMQHAIQKIAELSNYNDIYLYYQTALLGKKELHIAPDQKISIEMTLLRMF 360 Query: 358 AFHPR 362 + + Sbjct: 361 NLNTK 365 >UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacteria RepID=DPO3X_BUCAP Length = 363 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 182/359 (50%), Positives = 259/359 (72%), Gaps = 1/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ+LARKWRPQ+F ++GQ++++ A++NG SLG+IHHA+L SGTRGVGKT+IARL+AK Sbjct: 1 MNYQILARKWRPQSFKKIIGQKYIVKAISNGFSLGKIHHAWLLSGTRGVGKTTIARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC C C+EIE+G +D IEIDAASRTKVE+ R++LDN+ Y P++ RF Sbjct: 61 SLNCEIGITSLPCRKCTICQEIEKGICLDFIEIDAASRTKVEEIREILDNIYYTPSKSRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP+H+KF+LATTD +K+P TI SRCL F L L Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPQHIKFILATTDVEKIPKTIRSRCLHFKLNILSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I + L+HIL + + AL++++ A GS+RDAL+L + A+ ++ + + M Sbjct: 181 EDIFNFLKHILKKGGNNFDEEALKIISDYANGSMRDALNLLEHAMHLSKNNINLKNTTEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + A L + ++E + +++M L+N+ + G+EW+ +L+EM+ LH IAM++ P Sbjct: 241 LGIPNKKHAFLLTKFLLEQDSKKMMCLLNKISKIGLEWQNILIEMMRFLHHIAMLKSYPK 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + E ++++A +IQL Y+ LL GRKEL ++P+ +MGVEM LL+A+ Sbjct: 301 IWNQIFIKNNENEIKKIAENNSKYNIQLCYKILLKGRKELFFSPNHKMGVEMILLQAIT 359 >UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsiella grylli RepID=A8PNF7_9COXI Length = 523 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/361 (54%), Positives = 257/361 (71%), Gaps = 5/361 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ+F +++GQE L N L RIHHAYLF+GTRGVGKT++ARLLAK Sbjct: 1 MSYQVLARKYRPQSFDELIGQESTCRILKNALRTQRIHHAYLFTGTRGVGKTTLARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+T IT PC C +C+ I RF DLIE+DAASRTKVEDTRDLL +V Y P++GR+ Sbjct: 61 CLNCQTQITPEPCNQCISCQAIHANRFTDLIEVDAASRTKVEDTRDLLADVHYTPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HV FLLATTD Q+LP TILSRCLQFHLK + Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPPHVIFLLATTDTQRLPATILSRCLQFHLKTITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +IL +E I EP AL LA+AA+GSLRDALSL DQAIA + ++ Q ++ + Sbjct: 181 VQISNQLANILKKEKIPFEPEALAPLAQAAQGSLRDALSLLDQAIAYTNQNLTKQDINTL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + + L++A++ + ++ +L+ + + G+++ ++ E+L LH++A+ Q Sbjct: 241 LGHVAHSEIIQLLDALILEDTAKLWSLVEQFSELGVDFSCVMDELLTCLHQMALSQRFKT 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + I + A+T+ P IQLYYQ +L R+++ AP R+G EM LLR LAF Sbjct: 301 EVNYTQTII-----DFAQTLSPEAIQLYYQIVLFSRRDITLAPTPRLGFEMMLLRLLAFK 355 Query: 361 P 361 P Sbjct: 356 P 356 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 8/123 (6%) Query: 523 WAAQVSQLSLPKLV----EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSM 578 W ++QL L L +Q AL ++ +N V L L Q L + + KLA ALS Sbjct: 400 WPTLIAQLKLTGLTHALAQQCALQSYH---NNHVSLCLDPRQAALRSAKQETKLAHALSE 456 Query: 579 LKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEE 638 + L+I D ++ TP Q ++L QA E++ D +Q + + FDA+L + Sbjct: 457 YFKKPITLSIGVGDT-SLSTPARLEQQHQSQRLEQATEALQNDPTLQAIMQTFDAKLQPQ 515 Query: 639 SIR 641 SI+ Sbjct: 516 SIQ 518 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/460 (46%), Positives = 295/460 (64%), Gaps = 26/460 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQEHV AL N + R+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPKNFHELLGQEHVSKALINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+ PCGVC C+ I+ GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GR+KV Sbjct: 62 NCETGVTSEPCGVCGVCQSIDSGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ILN+E I++E AL L+ +A+GS+RDALSLTDQAIA G+G V+ + + MLG Sbjct: 182 LAEYLGTILNKEQISYESDALWQLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D ++++ + + N +++ I + ++ +A+ + LH++A++Q P Sbjct: 242 LIDQADVIAILANIYQQNTQQLTQSIQLLREQVVDAKAVFDRLAETLHQLAILQALPNFD 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 ++++LA+ +P +QLYY ++ R+ L A +EM LLR +AF Sbjct: 302 LQINRQQSEQLQQLAQKLPAELLQLYYDIVVKSRENLALANTPMQALEMCLLRLMAFK-- 359 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 PL ++ S P P P+ QS Q+P + +TT + + Sbjct: 360 -PLHRNQI---SLRP--------PIANNPESQSLDSQSPDFKIVDTTPS--------EAI 399 Query: 423 QGATKAKKSEPA-AATRARPVNNAALERL---ASVTDRVQ 458 QGA + +E + T + NN + + L AS D +Q Sbjct: 400 QGAKSSVLAEDSLQLTSEQSDNNLSDDNLLKSASNVDSIQ 439 >UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EY35_DICNV Length = 665 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/377 (51%), Positives = 257/377 (68%), Gaps = 13/377 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+TF ++VGQ+H+ AL+ L R+HHAYLF+GTRGVGKTS+AR+ AK L Sbjct: 2 YQVLARKWRPKTFRELVGQQHITQALSYALDHDRLHHAYLFTGTRGVGKTSLARIYAKSL 61 Query: 63 NCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC G +A PCG C++C EI+QGRF DLIE+DAASR +++T++LLDN+ YAP +GR+K Sbjct: 62 NCLINGTSAQPCGQCEHCLEIDQGRFPDLIEVDAASRRGIDETKELLDNLPYAPVKGRYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM +R SFNALLKTLEEPP HVKF+LATTD QK+P T+LSRCLQFHLK ++ E Sbjct: 122 VYLIDEVHMFTRESFNALLKTLEEPPPHVKFILATTDIQKVPTTVLSRCLQFHLKNINPE 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 Q+R L HIL E I +E AL LLA+AA GS+RD LS DQAIA G G V T V+ +L Sbjct: 182 QLRQHLAHILQVERIDYEAEALVLLAQAARGSMRDGLSFLDQAIAYGQGVVKTDDVAYLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + Q L+ + E++ V A++ E A ++ +L + L +I + QL Sbjct: 242 GAVPTAQIYRLLTKIAESDARAVRAILTELDAFSPDYMDVLRHVFQGLQQITVAQLQAQQ 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 N++ +R LA+ +P +QL+YQ + + +PY PD R+ +EMT LR +A P Sbjct: 302 NPNEIDQTLVR---LAQQLPVELVQLWYQIISDAWQSMPYQPDMRVALEMTFLRMIALQP 358 Query: 362 RMP---------LPEPE 369 +P +PEP+ Sbjct: 359 LLPETTISEKHIIPEPD 375 >UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 Tax=cellular organisms RepID=A9BMI7_DELAS Length = 731 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 199/399 (49%), Positives = 265/399 (66%), Gaps = 15/399 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F+++VGQEHV+ AL N L+ R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYLVLARKYRPRNFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC+ GITATPCGVC C EI+ GRF D E+DAAS V++ + LL+ Y P Sbjct: 61 SLNCQGADGQGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQSLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 +GRFKV++IDEVHML+ +FNA+LKTLEEPPE++KF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 + + E + L +L +E +A EP+AL+LL+RAA GS+RDALSLTDQAIA G GQ+ Sbjct: 181 RPMAPETVLEHLGQVLGQEGVASEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEA 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V MLG++D L+EA+ +A+G+ V+ G+ + L EM +L R+A+ Sbjct: 241 TVRQMLGSVDRSHVFRLIEALAQADGQVVVETSEALRRNGLSAASTLEEMCAVLQRMAVA 300 Query: 296 QLSP--AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 Q P AA +D A E+ LA +P + QL Y L GR EL APD + M L Sbjct: 301 QAVPQMAADASDPEAAEI--ARLAVLMPRDETQLLYSICLHGRAELGLAPDEYAALTMAL 358 Query: 354 LRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ 392 LR LAF P+ P P + T +TP+ P+ Sbjct: 359 LRLLAFKPQSAEPAPGAAEKK------TPALTPSTAKPE 391 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/402 (44%), Positives = 254/402 (63%), Gaps = 10/402 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP +F +VGQ H L N L +HH +LF+GTRGVGKT+IAR+LAK + Sbjct: 5 YQVLARKYRPHSFVKLVGQTHTKKTLINALDANNLHHGFLFTGTRGVGKTTIARILAKSI 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE GI++ PC C C EI++G+ +DLIE+DAAS T V++ RD+L+N QY P++ R+K+ Sbjct: 65 NCEQGISSKPCDKCATCVEIDKGQSIDLIELDAASHTGVDNMRDILENAQYMPSKNRYKI 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS++SFNALLKTLEEPPEHVKFLL TTDPQKLPVT+LSRCLQF L+ L ++ Sbjct: 125 YLIDEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQLTHDE 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I QL+ I+N E +++E AL +A GS+RDALSL DQ+I+ G G V+ + AMLG Sbjct: 185 ILEQLKFIMNAEVLSYEESALGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIKAMLG 244 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + D + L + + + V+ I + + RG L ++ L H+I++ Q+ Sbjct: 245 LVHHDDIIKLTTHLFSQDAKAVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIVNTES 304 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 ++ L+ I D+Q++YQ + G K++ AP ++G EMTLLR LAF Sbjct: 305 NK-------TIQNLSTQISNFDLQIFYQMSINGSKDMALAPSEQIGFEMTLLRMLAFRSD 357 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 +P ++ + + P + QP+ + T P Sbjct: 358 ---TQPNTEKKMIEIKSEVKISAPIEEKLQPKVEEKPGITKP 396 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 193/352 (54%), Positives = 255/352 (72%), Gaps = 1/352 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TFAD+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCET PCG C +CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 61 SLNCETPHEGEPCGQCQSCRDIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L E I +E AL LL RAA GS+RDALSL DQAIA G G V+ V M Sbjct: 181 QQVSQHLAHVLTSEQIPYEAPALALLGRAAAGSMRDALSLLDQAIAMGSGSVTEADVRQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D SL++A +G ++A E A R I +++ L E+ LL ++A+++ PA Sbjct: 241 IGAVDQHYLYSLLQAAANQDGAVLLATAQEMAGRAIGFDSALSELALLLQKLALIKTIPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT 352 A+ D + +++LA + IQLYYQ ++ G+++LP APD G MT Sbjct: 301 AVPADDPERDT-LQQLAGQLGDEQIQLYYQCVIHGKQDLPLAPDEYAGFVMT 351 >UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetella RepID=A9HZ16_BORPD Length = 736 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/360 (51%), Positives = 249/360 (69%), Gaps = 1/360 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARKWRP++F +VGQ+HV+ AL + L R+HHA+LF+GTRGVGKT+++R+LAK Sbjct: 28 MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDSQRLHHAWLFTGTRGVGKTTLSRILAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+ PCG C C EI+ GRFVD +E+DAAS VE+ LL+ YAP GR+ Sbjct: 88 SLNCETGITSKPCGQCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRY 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 148 KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L+ +L +E +A E AL+L+A+AA GS+RDALSLTDQAIA G ++ AV M Sbjct: 208 DAIVGHLQAVLGDEAVACELPALRLIAQAAGGSMRDALSLTDQAIAYSAGNLTEDAVRGM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+EA+ + V+A+ +E + RG+ + L ++ LL R+A+ Q P Sbjct: 268 LGTIDQRHLVRLLEALPAGDATGVLAVADELSTRGLSYAGALADLAVLLSRVAIEQRVPG 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A D + + LA + P +QL+Y + R EL APD G M LR LA + Sbjct: 328 ATPAD-DPLAADISRLAGVLHPDAVQLFYSVAVHSRGELSLAPDEYAGFVMACLRMLALN 386 >UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter sp. MED105 RepID=A6GQQ4_9BURK Length = 586 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/380 (50%), Positives = 255/380 (67%), Gaps = 7/380 (1%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LARKWRP+ F +VGQ HV+ AL++ L R+HHAYLF+GTRGVGKT+IAR+LA+ +N Sbjct: 7 QALARKWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARILARAVN 66 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE GI+ TPCG C C EI QGRFVDL+E+DAA+ T+V++ R LL+N YAP GR+KVY Sbjct: 67 CEQGISRTPCGKCQACVEISQGRFVDLLEVDAATNTRVDEMRALLENAMYAPTAGRYKVY 126 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS +FNA+LKTLEEPP HV F+LATTDPQK+P T+LSRCLQF L+ L +Q+ Sbjct: 127 VIDEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQLPPDQL 186 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L HIL+EE IA EP AL+LLA+AA GS+RDALSLTDQAIA G V+ V MLG Sbjct: 187 ADHLAHILSEEQIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVTEDTVRTMLGA 246 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 +D L++A+ + +G+ ++ L N AA + A+L E+ + +R+++ + Sbjct: 247 IDQQVVHQLLQALAQGDGKALLELSNALAAASAPFGAILDELAAIAYRLSVAHFAGGLDA 306 Query: 304 NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 363 +D + ++ L D+QL YQ R EL AP+ +G M L+R LAF P Sbjct: 307 DD--PDQAALQNLQGAFGAEDLQLIYQIATHARAELHLAPEEHIGFSMALVRMLAFKPG- 363 Query: 364 PLPEPEVPRQSFAPVAPTAV 383 + V R AP+AP V Sbjct: 364 --GQGAVTRS--APLAPAVV 379 >UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBE6_9GAMM Length = 636 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 194/367 (52%), Positives = 251/367 (68%), Gaps = 4/367 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+ F ++VGQ HV AL L RIHHAYLF+GTRGVGKT+IAR+ AK L Sbjct: 2 YQVLARKWRPKNFHELVGQTHVTQALTYALDHNRIHHAYLFTGTRGVGKTTIARIFAKSL 61 Query: 63 NCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ +++ PCG CD+C+EI+QGRF DLIE+DAASR++VE+TR+LLDNV YAP +G++K Sbjct: 62 NCQKNHVSSNPCGECDHCKEIDQGRFPDLIEVDAASRSRVEETRELLDNVPYAPVKGQYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM S SFNALLKTLEEPP HVKF+LATTDPQKLP TILSRCLQFHLK + Sbjct: 122 VYLIDEVHMFSASSFNALLKTLEEPPPHVKFILATTDPQKLPATILSRCLQFHLKNMSER 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 QI L HIL EH +EP AL LLA AA GS+RD+LSL DQA+A G G V T+ V+ +L Sbjct: 182 QISEHLAHILQAEHAEYEPDALHLLANAAAGSMRDSLSLLDQALAYGRGHVRTRDVATLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + + Q L +++ + + + + ++ LL+ +L + +I + QL Sbjct: 242 GAVPEPQLLHMLQLLANGDAPGLRNTLESLDEYAPDYAGLLLRLLQQMQKITIAQLGAER 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 + I + LA +P +QL+YQ + LPY PD RM +EM+LLR +A P Sbjct: 302 YAEE---IPAALHALAARLPVELLQLWYQIGNEAWQNLPYQPDARMALEMSLLRMIALQP 358 Query: 362 RMPLPEP 368 +P +P Sbjct: 359 LLPTSDP 365 >UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella RepID=B0TVX0_FRAP2 Length = 551 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 171/362 (47%), Positives = 245/362 (67%), Gaps = 1/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ LARK+RPQ+F++V GQ+H L +L + L ++HHAYLF+GTRGVGKT++ RLLAK Sbjct: 1 MSYQALARKYRPQSFSEVAGQQHALNSLVHALETQKVHHAYLFTGTRGVGKTTLGRLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+TG+TA PC C+NC I F+DLIEIDAASRT VE+T+++LDN+QY P++GR+ Sbjct: 61 CLNCKTGVTAEPCNKCENCLAINNNSFIDLIEIDAASRTGVEETKEILDNIQYMPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPE+VKF+LATTD K+PVTILSRC+Q HLK + Sbjct: 121 KVYLIDEVHMLSKQSFNALLKTLEEPPEYVKFILATTDYHKIPVTILSRCIQLHLKHISQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+ QL+ +LN+E+I+ + ++L +A A+GSLRDALSL DQAI+ G++ + M Sbjct: 181 SDIKDQLKVVLNKENISSDEQSLDYIAYHAKGSLRDALSLLDQAISFCSGELKQAQIKQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D ++ +++EA++E N V+ + +A+L + + + + + Sbjct: 241 LGIIDSEEVYNIIEAIIENNPSAVLPAVKNLTLTESNADAVLDRIAEIWFACCIYSFTQS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + I++ + L + I YQ + +K++ AP GV M +LR +AF Sbjct: 301 LDAINDIDIDIINKVLDK-ISIEQAHFLYQLTITAKKDISLAPSFETGVTMAVLRLIAFQ 359 Query: 361 PR 362 + Sbjct: 360 KK 361 >UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thiomonas intermedia K12 RepID=C7I1D0_THIIN Length = 612 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 203/384 (52%), Positives = 263/384 (68%), Gaps = 12/384 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ LARKWRP++FA +VGQ+HV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MTSVALARKWRPKSFASLVGQDHVVRALTHALDHDRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC + G+T+ PCGVC C EI+ GRFVD IE+DAAS VED LL+ Y P Sbjct: 61 ALNCTGPDGQGGVTSQPCGVCPACTEIDAGRFVDYIELDAASNRGVEDMTTLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHMLS H+FNA+LKTLEEPP++VKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLSNHAFNAMLKTLEEPPDYVKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+ +L E++ + AL+L+ARAA GS+RDALSLTDQA+A G+V T+ Sbjct: 181 KQMMPGAIVGHLQQVLQAENVPADDAALRLIARAAHGSMRDALSLTDQALAYCAGRVETE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEA---AARGIEWEALLVEMLGLLHRI 292 AV MLGT+D L +++A+ +G +ALI++A ARG+ + A L E+ LL I Sbjct: 241 AVQQMLGTVDRSDLLLILQALASQDG---VALIHQADALEARGLSFGAALEELAALLQTI 297 Query: 293 AMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT 352 A++QL P A D E + LA + P +QL Y T+L GR EL APD R G MT Sbjct: 298 ALLQLVPQAADADDPQHE-ALVALAAQLSPELVQLAYTTVLHGRNELSLAPDDRTGFTMT 356 Query: 353 LLRALAFHPRMPLPEPEVPRQSFA 376 LLR LAF P + P +P A Sbjct: 357 LLRLLAFAPVIAGSVPSLPPGGLA 380 >UniRef50_Q8D230 DnaX protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D230_WIGBR Length = 365 Score = 347 bits (891), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 153/360 (42%), Positives = 236/360 (65%), Gaps = 1/360 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L KWRP+ F D++GQ+HVL L N +I+++YL SG RG+GKT++ARL+AK Sbjct: 1 MNYKPLNIKWRPKIFNDIIGQDHVLRFLKNSFLDKKIYYSYLISGIRGIGKTTLARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC I PC +C NC E E+ FVDLIEIDAAS TK+E+ +++LDN++Y P++GR+ Sbjct: 61 SLNCFYDINFNPCRICKNCEESEKNCFVDLIEIDAASHTKIENIKEVLDNIKYLPSKGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS++SFNALLK LEEPP HVKF+LATT+ K+P TILSRCL LK + Sbjct: 121 KIYIIDEVHMLSKYSFNALLKILEEPPNHVKFILATTELNKIPETILSRCLHLQLKEISE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I + L+ IL E I +E AL++++++++ S+RDAL+L ++A G+ + VS M Sbjct: 181 TDILYNLKKILKLEKIYYEEEALKIISKSSQHSMRDALTLAEKASILGENNILYNVVSDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + + L E + E+++ + + I W+ L+ M+ ++H++ + + Sbjct: 241 LGCISFMELIDLFEIISLNKKEKLIFFFKKIENKSINWDDFLINMILIVHKVLFFKFNDT 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + + +L++ I D+ YY L GRKEL Y+ ++++ VE+T+LRA F Sbjct: 301 YKDPKKINTKKTKFYKLSKLISTNDLYKYYDIFLQGRKELSYSTEQKITVEITILRAFYF 360 >UniRef50_A4GJ98 DNA polymerase III subunits gamma/tau n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJ98_9BACT Length = 539 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 173/375 (46%), Positives = 248/375 (66%), Gaps = 12/375 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP +F++VVGQEHVL AL N +S ++H AY+FSGTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKYRPSSFSEVVGQEHVLKALENSISQNKLHQAYIFSGTRGVGKTTIARVFSK 60 Query: 61 GLNCETGIT--ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + C C C EI+ GR ++ +E+DAASRT V+D R+LLD+VQY PA Sbjct: 61 CLNCMQADSPQVISCDKCSACEEIKIGRHMEFLEVDAASRTGVDDMRELLDSVQYKPANA 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+YLIDEVHMLS+ SFNALLKTLEEPP HV FL+ATT+ +K+P T+LSRCLQ +LK + Sbjct: 121 RFKIYLIDEVHMLSKSSFNALLKTLEEPPPHVMFLMATTEVEKVPKTVLSRCLQLNLKVI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +I+ L+ +L+ E I ++ ++ L+A +A+GS+RD L+L DQAIA G+G ++ V Sbjct: 181 PEAKIQLHLKSLLDLESIEYDEESIALIADSAQGSVRDGLTLLDQAIAHGNGSLNADDVK 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 A+LGT+D + LVE +V NG+ +++ +E+E +L ++ + H+I++ Q Sbjct: 241 ALLGTIDQSYIIELVEHVVAGNGDGAYNALHKITELNVEYEQVLKILISVFHKISLHQ-- 298 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 ND +I+ LA + P QL+Y+ L + P + +E+ +LR LA Sbjct: 299 -QLHNNDSESIQ----RLAENLDPQITQLHYEIALNSLGKFHVHPHPKQALELCILRMLA 353 Query: 359 FHPRMPLPEPEVPRQ 373 F P+ + PRQ Sbjct: 354 FQ---PMGDVVTPRQ 365 >UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=beta proteobacterium KB13 RepID=B6BTP5_9PROT Length = 512 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 159/356 (44%), Positives = 241/356 (67%), Gaps = 9/356 (2%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LARKWRP+ F +VGQE ++ AL N + R+HHAYL SGTRGVGKT+IAR+ AK LNC Sbjct: 6 LARKWRPKNFETIVGQEFIVEALKNSILGDRLHHAYLLSGTRGVGKTTIARIFAKCLNCH 65 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 TG TPC C +C EI+Q + +D+IE+DAAS T+V++ R+LL+N Y P ++K+++I Sbjct: 66 TGSNPTPCCECSSCVEIDQSKSIDVIELDAASNTQVDNMRELLENANYQPTSSKYKIFII 125 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHMLS+ SFNA+LKTLEEPPEHV F+LATTDP+K+PVT++SRCL F+L + ++I Sbjct: 126 DEVHMLSKSSFNAMLKTLEEPPEHVIFILATTDPEKIPVTVISRCLHFNLMQMTNDEISG 185 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 QL++I EE+IA+E A+ ++++ A+GS+RDALSL D+ I +G VS + ++ +LG Sbjct: 186 QLQNIFYEENIAYEDEAINMISKHADGSMRDALSLADRVINYTNGNVSLEKLTQILGITS 245 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGND 305 D L+ +++ N ++V+ L+N+ I +E+ L + + I+ Q G Sbjct: 246 DGVIDELLTNILDNNKQKVLDLLNKLKEHHISYESALKVLSEKIFAISEEQ----TFGGG 301 Query: 306 MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 +I+ R ++++ + +Q YQ + G K+LP++P + +G MT++R L F P Sbjct: 302 NKSIQ-RGKQVSLQL----LQTLYQISINGLKDLPFSPSQHIGFRMTIIRLLNFIP 352 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Query: 512 KLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQ 570 K E I+ D W V Q+ P + + +A N K + DN + L + +HLNN + Sbjct: 380 KKTIENIQIDNWDHVVDQIK-PGMAKTLAQNCVVKSQEDNFLYLIVDDRFKHLNNDKYIK 438 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 L E+L + G +++ I E+ TP + +Q ++ L A +SI D+ I+ + Sbjct: 439 ILEESLYTIYGEKIKIEINEE--TVTSTPAQKKQIEKDDALKVATDSIKTDSKIENILNE 496 Query: 631 FDAELDEESIR 641 FDA++ E +I+ Sbjct: 497 FDAQIIESTIK 507 >UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8F3_MAGSM Length = 605 Score = 325 bits (832), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 176/371 (47%), Positives = 238/371 (64%), Gaps = 14/371 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY VLARKWRP+ F D++GQEH + AL + L GRI HA+LF+G RG+GKT+++RLLA Sbjct: 6 SYVVLARKWRPRRFEDLIGQEHTVQALRHALEQGRIPHAFLFTGIRGIGKTTLSRLLAMC 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC TG+TA PCG CD+CR I +G D+ E+DAASRTKVE R+LLD V Y P+ R+K Sbjct: 66 LNCGTGVTANPCGACDSCRAIVRGEHPDVFEVDAASRTKVEQMRELLDGVAYTPSLSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y++DEVHMLS SFNALLKTLEEPP HVKF+ ATT+ +K+ TILSRC ++ L+ LD + Sbjct: 126 IYILDEVHMLSASSFNALLKTLEEPPTHVKFIFATTEVRKILPTILSRCQRYDLRRLDRD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L H+L+ E IA++ L ++ AA+GS+RDALSL DQAIA G G+V VS +L Sbjct: 186 GLARYLAHVLDVEQIAYDQEGLAAISHAADGSVRDALSLLDQAIAHGGGRVDYTHVSGLL 245 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAA---RGIEWEALLVEMLGLLHRIAMVQLS 298 G D ++L + R++ ++ AA G+E LL ++L + H++ Sbjct: 246 GLTDRQAVVALFADLCRG---RLLEMLERAAYFHRDGVEPVVLLNDLLDITHQVT----R 298 Query: 299 PAALGNDMAAIELRMRELARTIPPT----DIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A+G AA L E + + P +Q+ YQ LL GR++L A R +EM LL Sbjct: 299 ELAVGVGDAAQALSEHEGLKEVWPKLGLEHLQMLYQVLLRGREDLQMARLPRQALEMLLL 358 Query: 355 RALAFHPRMPL 365 RA P PL Sbjct: 359 RAAHLRPVPPL 369 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 175/436 (40%), Positives = 257/436 (58%), Gaps = 34/436 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQTF+D+ GQEHV L N + GRI HA+LF+G RGVGKTS AR+LAK Sbjct: 1 MSYLVLARKWRPQTFSDLTGQEHVSQTLQNAIDSGRIAHAFLFTGARGVGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G++ PC VC C EI G VD++EID AS T V+D R+L +NV+Y P+R R+ Sbjct: 61 ALTCEQGMSPEPCNVCPACTEITAGTAVDVLEIDGASNTGVDDIRELRENVKYLPSRLRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPP HVKF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ +L HI+++E IA +L ++AR +GS+RD+LS+ DQ +A QV + V ++ Sbjct: 181 GKVVGRLRHIVDQEGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVVSL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L A+ + V+ ++ G E++ L + +++ Sbjct: 241 LGVVDRRLLLDATAAVFGRDTRTVLDIVARVDEFGYNMRQFCGELIDHLRNLLILK---- 296 Query: 301 ALGN-----DMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A+G+ D++ EL +R+ A ++P D+Q + LL EL + R+ +EM L+ Sbjct: 297 AVGDGTDLLDLSEAELATLRQQAESVPLDDLQRHLTVLLRADGELGHTSFPRLVLEMALV 356 Query: 355 RALAFHPRMPLPE-----PEVPRQSFA------------PVAPTAVMTPTQVP------P 391 + P +P+ + ++ S P AP TP + P P Sbjct: 357 KMATLAPAVPVDQLLERLNKIEEGSGGGVADARAQWRATPPAPAGSPTPARAPERTAATP 416 Query: 392 QPQSAPQQ-APTVPLP 406 P+ A +Q AP+ P P Sbjct: 417 PPRPAERQAAPSAPAP 432 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 158/358 (44%), Positives = 226/358 (63%), Gaps = 4/358 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ+F D+VGQEHV L N + GR+HHA+LF+G RGVGKTS AR+ AK Sbjct: 1 MSYLVLARKYRPQSFDDLVGQEHVSQTLGNAIKTGRVHHAFLFTGARGVGKTSAARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++ PC VC +CREI G+ +D+ EID AS T V+D R+L +N++Y P+R R+ Sbjct: 61 ALNCEQGLSPQPCNVCQSCREISAGQGLDVFEIDGASNTGVDDIRELRENIRYLPSRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPPEH KF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I+ R+L L+AR EGS+RDA S DQ IA V V + Sbjct: 181 PLIVARLKEIAAAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--S 298 LG +D + +E+++ + R++ + G + E++ L + ++++ Sbjct: 241 LGMVDRRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVETLRSLVVLKVVPE 300 Query: 299 PAALGNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 P AL D EL +R L+ T+ D++ L+ EL + R+ +EM LLR Sbjct: 301 PEAL-LDATPDELEELRRLSATVELEDLERAVTVLVRTEAELAGSSFPRLALEMALLR 357 >UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 Length = 553 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 138/298 (46%), Positives = 205/298 (68%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R+WRP+ F+DVVGQ H+ L N + R+ HAYLF GTRG GKTS+A++LAK Sbjct: 1 MSYTTLYREWRPKNFSDVVGQNHITVTLKNQILNNRVAHAYLFCGTRGTGKTSMAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C++I QG +D+IE+D AS+ K+ED +D+++NV+Y P G++ Sbjct: 61 AVNCLDIQQGEPCNECEMCKKINQGISMDVIEMDTASKRKLEDIKDVIENVKYPPQEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML++ + NA LKTLEEPP +V F+LATTDPQKLPVTILSRC +F + + Sbjct: 121 KVYIMDEVHMLTQEAVNAFLKTLEEPPLNVIFILATTDPQKLPVTILSRCQKFDFRRIKS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++L I+NEE I + R+L L++R +G++RDALS+ DQAI+ G G+V ++ M Sbjct: 181 SEIFNRLRAIVNEEGIFADDRSLNLISRICDGAMRDALSVLDQAISMGSGKVEYNSIVDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 LG + ++ L ++++E N E M +I++ G + + EM+ L + MV++S Sbjct: 241 LGLVTNENLFHLTDSIIEKNVELSMKVIDDIVLSGKDIYNFIKEMIVHLRNLLMVKVS 298 >UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alphaproteobacteria RepID=Q0BVJ3_GRABC Length = 686 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 170/386 (44%), Positives = 245/386 (63%), Gaps = 14/386 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLAR++RP+ F D++GQ+ ++ L N +L R+ HA++ +G RGVGKT+ AR++A+ L Sbjct: 48 YRVLARQYRPRHFDDLIGQDALVRTLRNAFALNRVAHAFMLTGVRGVGKTTTARIIARAL 107 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G TA PCGVC NC I R D++E+DAASRT V+D R++++ ++ P + Sbjct: 108 NCTGADGQGGPTADPCGVCPNCTAILADRHPDVVEMDAASRTGVDDVREIIEATRFRPLQ 167 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R KV++IDEVHMLSR++FNALLKTLEEPP HV F+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 168 ARTKVFIIDEVHMLSRNAFNALLKTLEEPPPHVTFIFATTELRKVPVTVLSRCQRFDLRR 227 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ--VSTQ 235 +D E + IL +E ++ P+AL L+ARAA+GS+RD LSL DQAIA D +S Sbjct: 228 IDAEVLSAHFSRILEQEGVSASPQALALIARAADGSVRDGLSLLDQAIAQNDPGIPISEA 287 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V+ MLG D L L+EA++ + +A+ + A ARG + +L ++L L+H + + Sbjct: 288 QVADMLGLADRGMVLDLLEALMAGDTASALAVTDTAHARGADLGMVLQDLLELIHTLTRL 347 Query: 296 QLSP---AALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEM 351 + P A G MA E LR LA + + +Q LL G E+ APDRR EM Sbjct: 348 KTIPHLRTAPG--MAEAERLRGSALADRLAMPVLGRAWQMLLKGIAEVEAAPDRRAAAEM 405 Query: 352 TLLRALAFHPRMPLPEPEVPRQSFAP 377 L+R L + +P P V R + AP Sbjct: 406 VLIR-LCYVADLPPPAELVRRLTGAP 430 >UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 Tax=Zymomonas mobilis RepID=C8WB95_ZYMMN Length = 628 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/372 (43%), Positives = 230/372 (61%), Gaps = 9/372 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RPQ F+D++GQ+ ++ L N ++ R+ HA+L +G RGVGKTS ARL+AK L Sbjct: 11 YRVLARKYRPQKFSDLIGQDAMVRTLGNAIARDRLAHAFLLTGVRGVGKTSTARLIAKAL 70 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC G+T PCG C+ CR I +GR +D++E+DAAS T V+D RD++++V+YA Sbjct: 71 NCVGKDGHGGMTIDPCGECEACRAIAEGRHIDVVEMDAASHTGVDDIRDIVESVRYASVS 130 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 RFKVY+IDEVHMLS+ +FNALLKTLEEPP HVKFL ATT+ K+P+T+LSRC +F L+ Sbjct: 131 ARFKVYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEINKVPITVLSRCQRFDLRR 190 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + + ++ E + E AL ++A+AAEGS+RD LS+ DQAIA G + V Sbjct: 191 ISTATLTDYFSKVVQLEQVEAEEEALAMIAKAAEGSVRDGLSILDQAIAHSSGSILAADV 250 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D SL+ ++E G+RV+ + G+E EALL +L L+H I ++ Sbjct: 251 REMLGLSDRGVIKSLLVDLLEGKGDRVLDHVKAQYDLGVEPEALLHGLLQLIHAITRSKM 310 Query: 298 S-PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L E+ + EL + + + +Q LL G E+ A EM LLR Sbjct: 311 GRPDNLTLHPTEEEIWLAELGKKLSFPVLHRLWQLLLKGHSEVQNAVLPLEAAEMALLRV 370 Query: 357 LAFHPRMPLPEP 368 + H LP+P Sbjct: 371 I--HASQ-LPDP 379 >UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 Tax=Cystobacterineae RepID=A7HGU5_ANADF Length = 606 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 150/300 (50%), Positives = 203/300 (67%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F ++ GQ+HV+ L+N L G++ HA+LF+G RGVGKT+ ARL+AK Sbjct: 1 MNYLVLARKYRPQQFGEMSGQQHVVRTLSNALKTGQLAHAFLFTGPRGVGKTTTARLVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C EI +GR VD++EIDAAS V++ RD+++ V+Y PAR R+ Sbjct: 61 ALNCEKGPTAEPCGACTPCVEIAEGRAVDVVEIDAASNNGVDNVRDIVEAVKYRPARDRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DEVHMLS +FNALLKTLEEPPEHVKF+LATTD K+P TILSRC +F + L + Sbjct: 121 KVFVVDEVHMLSTGAFNALLKTLEEPPEHVKFVLATTDVHKVPETILSRCQRFDFRRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL + E + P AL L+AR AEG +RDALSL DQ A+ AV+ Sbjct: 181 QQIADQLAKVAEAEGMRLAPGALALVARQAEGGMRDALSLLDQVRAAAGDAPDEAAVAEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + A+V G ++A + ARG+E + + E++ L + + +L PA Sbjct: 241 LGAVDAAAISRICGALVHREGGALLAELEALHARGLEMKRVAEEIVRHLRNVVVARLVPA 300 >UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 Tax=Alphaproteobacteria RepID=A1B872_PARDP Length = 592 Score = 297 bits (760), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 161/373 (43%), Positives = 233/373 (62%), Gaps = 8/373 (2%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +YQVLARK+RP+TFAD+VGQ+ ++ L N + RI A++ +G RG GKT+ AR++AKG Sbjct: 7 NYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFVMTGIRGTGKTTTARIIAKG 66 Query: 62 LNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 LNC + G T PCGVC++C I +GR VD++E+DAASRT V D R+++++V Y A Sbjct: 67 LNCTGPDGQGGPTTEPCGVCEHCVAISEGRHVDVMEMDAASRTGVNDIREIIESVHYRAA 126 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+K+Y+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 127 SARYKIYIIDEVHMLSTSAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRCQRFDLR 186 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 ++ E + L I E AL L+ RAAEGS RDA SL DQAI+ G G+ + Sbjct: 187 RIEPEVMIALLRRIATTEGAQITDDALALITRAAEGSARDATSLLDQAISHGAGETTATQ 246 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V AMLG D + L L + ++ +A + A G + A+L ++ + H +++V+ Sbjct: 247 VRAMLGLADRGRVLDLFDMILRGAAAEALAELQAQYADGADPMAVLRDLAEITHWVSIVK 306 Query: 297 LSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 ++P AL + + R R +A +P + +Q LL E+ AP+ M EM ++ Sbjct: 307 ITPEALDDPTIGPDERARGQAIAEKVPMRALTRLWQMLLKALDEVGQAPNAMMAAEMAII 366 Query: 355 RALAFHPRMPLPE 367 R L +P PE Sbjct: 367 R-LTHVADLPDPE 378 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/366 (41%), Positives = 228/366 (62%), Gaps = 4/366 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 +SYQV+ARKWRPQ+F DVVGQ H+ L+N L GR+ HA LF+G RG GKTS AR+LAK Sbjct: 17 LSYQVIARKWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAK 76 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L C PC C +C EI G +D+IEID AS V+ R+L D V + P+ G++ Sbjct: 77 ALRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSGKY 136 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP HV F++ATT+ K+P TILSRC +F + + Sbjct: 137 KIYIIDEVHMLSTSAFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRIST 196 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I + E + + AL ++AR +GS+RD+ SL DQ I +G ++ +V + Sbjct: 197 RSITERLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEI 256 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D + A+++ N + V+ +I + AA G E ++L ++ + ++++S A Sbjct: 257 LGLTDRALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEA 316 Query: 301 ALGN--DMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +M EL+ + E+A+ +P DI + + L G ++P A D R+ +E+TLLR + Sbjct: 317 QASQILEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQDPRIVLEVTLLR-M 375 Query: 358 AFHPRM 363 A P++ Sbjct: 376 ASAPKL 381 >UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46EC Length = 614 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/299 (49%), Positives = 201/299 (67%), Gaps = 13/299 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V+AR++RPQ F++++GQEHV AL N L GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 16 AYTVVARRYRPQQFSELIGQEHVAGALVNALKSGRVAHAYLFTGARGVGKTSAARILAKA 75 Query: 62 LNC--ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC T TPC CD+CR + G VD++EID AS KVE+ RDL NV + PARGR Sbjct: 76 LNCLKTDKATPTPCDECDSCRAVMTGDDVDVLEIDGASNNKVEEVRDLRQNVGFRPARGR 135 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHMLS +FNALLKTLEEPPEHVKF+LATT+ QK+P+TILSRC +F + Sbjct: 136 YKIYIIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKIPITILSRCQRFDFAHVG 195 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +I QL+ I+ E + AL+L+AR A GS+RD+ SL DQ +AS G ++ V+A Sbjct: 196 PGKIFEQLKRIVEREGHQADDDALRLVARRAAGSMRDSQSLLDQLLASSSGTLTAGQVTA 255 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIE-----------WEALLVEMLG 287 +LGT DD+ + L +A++ + + + I E RG++ W AL++ G Sbjct: 256 VLGTAGDDRVIELAKAILANDPKTALDRIAEWVERGLQIGELIDQVVEYWRALMLVSCG 314 >UniRef50_Q057E1 DNA polymerase III, g and t subunits n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057E1_BUCCC Length = 368 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 134/363 (36%), Positives = 229/363 (63%), Gaps = 4/363 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y++L+ KWRPQ F ++G ++ + + N L+ +IH ++L SG GVGKT+IAR+LAK Sbjct: 1 MKYKILSNKWRPQNFNQIIGHKYTVKMIKNSLNFKKIHQSWLLSGMHGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GIT+ PC C NC +E+G+F+D IE+DAAS+TKV+D + +LD +YAP GRF Sbjct: 61 CLNCKIGITSIPCRKCKNCLSLEKGKFLDFIELDAASKTKVDDIKIMLDTTKYAPMCGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+HSFNALLK LEEPP++++ +ATT+ K+P TI+SRCL L + + Sbjct: 121 KIYLIDEVHMLSKHSFNALLKILEEPPKYIQIYIATTNIHKIPKTIISRCLHIKLSYITL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTD--QAIASGDGQVSTQAVS 238 I + L+ I +E+I + AL++++ ++GS+R+AL+ + ++ ++ + + Sbjct: 181 HNIYNFLKKITKKENIKIKKEALKIISNTSQGSIRNALNTLEFIRSSVKNKTEIKKKYIF 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 +LG LD L L ++ + ++ ++N A GI++ ++ ++ H+I++++++ Sbjct: 241 KLLGILDKKNVLKLAIEIINNDFNKIFNILNNAEKIGIQYSNIVSSLIIFFHKISLIKIN 300 Query: 299 PAALGNDMAAIEL--RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + ++ L++ I D+Q Y + LL G+ L +P ++G E+ L + Sbjct: 301 QKKKKKYNKISKYKQKVYILSKKISFKDLQFYCKILLQGKHYLNNSPSPKIGFEIMLFQI 360 Query: 357 LAF 359 + Sbjct: 361 FQY 363 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 150/341 (43%), Positives = 210/341 (61%), Gaps = 2/341 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY V+ARKWRPQTF +VVGQ HV L N + RI H+YLF+G RGVGKTSIAR+LAK Sbjct: 1 MSYLVIARKWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T TPC VC NC EI QG VD++EID AS ++ R+L + V+Y PA+ R+ Sbjct: 61 ALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAKSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPEHV F+ ATT+P K+P TILSRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L HI +E +A L +AR A+GS+RDA SL +Q ++ +S + V + Sbjct: 181 HMLVDHLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D A++E + + ++ + RG++ ++ + +V Sbjct: 241 LGVIDRRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEG 300 Query: 301 ALGN-DMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKEL 339 D+ + E + + E A P + LY+QT+L +E+ Sbjct: 301 DSRRLDLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEI 341 >UniRef50_A5V2B2 DNA polymerase III, subunits gamma and tau n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2B2_SPHWW Length = 582 Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 162/375 (43%), Positives = 229/375 (61%), Gaps = 16/375 (4%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RPQ F +++GQ+ ++T LAN + GR+ HA+L +G RGVGKTS ARL+AK L Sbjct: 8 YRVLARKYRPQNFNELIGQDAMVTTLANAIRRGRLAHAFLLTGVRGVGKTSTARLIAKAL 67 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G T PCGVC+ C I +GR +D++E+DAAS T ++D R++++ V+YA Sbjct: 68 NCIGPDGQGGPTIDPCGVCEPCVAIAEGRHIDVVEMDAASHTSIDDVREIIEAVRYASVS 127 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+K+Y+IDEVHMLS+ +FN LLKTLEEPP HVKFL ATT+ K+P+T+LSRC +F L+ Sbjct: 128 ARYKIYIIDEVHMLSKSAFNGLLKTLEEPPAHVKFLFATTEVNKVPITVLSRCQRFDLRR 187 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + +++ +++ E + +P AL L+ARAAEGS RD LS+ DQAIA G G+V Q V Sbjct: 188 ITADKLAAHFTNVVAAEGVEADPEALALIARAAEGSARDGLSILDQAIAHGSGRVEAQQV 247 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D L M++ + V+A I G+E A+L +L H I ++ Sbjct: 248 RDMLGLSDRGAVRRLFGEMLKGDAAAVLASIRGQYDLGVEPVAMLHGLLETCHAITRAKV 307 Query: 298 SPAALGNDMAAIELRMRE----LARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 + G D A+ RE A + + +Q LL G E+ A EM L Sbjct: 308 A----GTDDPALSAEEREAYGDWAGKLGFATLHRLWQLLLKGHGEVQTAAMPIEAAEMAL 363 Query: 354 LRALAFHPRMPLPEP 368 LR + H LP+P Sbjct: 364 LRVV--HASQ-LPDP 375 >UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZPF5_9PLAN Length = 618 Score = 293 bits (751), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 138/288 (47%), Positives = 196/288 (68%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V+AR++RPQ+F ++VGQ V AL N + GR+ HAYLF+G RGVGKTS AR+LAK L Sbjct: 18 YVVVARRYRPQSFEELVGQSQVAQALKNAIERGRVGHAYLFTGARGVGKTSSARILAKAL 77 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ G +ATPC CD CR + G VD++EID AS +E+ R L NV P+R RFK+ Sbjct: 78 NCQRGPSATPCNECDICRSVTVGEDVDVLEIDGASNRGIEEIRQLRSNVNIRPSRARFKI 137 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHM ++ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F + +++ Sbjct: 138 YIIDEVHMFTKEAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFGGIRMDE 197 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L +I+ E + EP AL+LLAR A GS+RD+ SL +Q +A G +++ V+ MLG Sbjct: 198 IVTRLAYIVENEGVTAEPEALRLLARKANGSMRDSQSLLEQLLAFGGREITVADVNQMLG 257 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLH 290 +Q ++ A+ + V+A ++A RGI+ L+ ++LG Sbjct: 258 AAGSEQIAVIMTALAARDAAAVLAYFDQALTRGIDPGQLIEQLLGFFR 305 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 181/492 (36%), Positives = 269/492 (54%), Gaps = 47/492 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ F++V+GQ+HV L N + RI H Y+FSG RG+GKT+IAR+LA Sbjct: 1 MSYQVLARKYRPQKFSEVIGQDHVTRTLKNAIEQQRIAHGYIFSGHRGIGKTTIARILAM 60 Query: 61 GLNCETGI--TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC++ + PCGVCD+C+E++ G+ VD+IEIDAA+ +++ R+L + +Y PAR Sbjct: 61 ALNCQSADHPVSEPCGVCDSCKEVKAGQSVDVIEIDAATNRGIDEIRELREAARYRPARD 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y++DE H ++ +FNALLKTLEEPP H+ F++ATT+P+ +P TI SRC F A+ Sbjct: 121 RFKIYILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTEPEDIPQTIRSRCQHFSFHAV 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + I QL I +E I E AL +LA A +GS+RDALS+ DQAIA+ Q+ T V Sbjct: 181 KFDDIVLQLRDIAGKEGIGAEDDALAMLAEAGDGSMRDALSIMDQAIAACGNQLKTDDVR 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLH-------- 290 ++GT+ D ++ + + E V+ I++ LL+E LH Sbjct: 241 GLMGTVSSDVLEDIMNGVHANSSESVLTTIDK----------LLIEGHSPLHFAKQAVRF 290 Query: 291 -RIAMVQLSPAALGNDMAAIEL------RMRELARTIPPTDIQLYYQTLLIGRKELPYAP 343 R AMV G D A +++ R+ +A D+ + Q +L +L Y Sbjct: 291 LRNAMVA---KVAGKDSALLQISSDERERVARVAEQFSEEDLARFLQIMLRTHSDLGYKQ 347 Query: 344 DRRMGVEMTLLRALAFHPRMPLPE--PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 ++R +E+ LL+ + +PL E + + +V P P P AP A Sbjct: 348 EQRFHLELGLLKLVHAQRMLPLEELLSGSASAAPSSAPRASVAAPVSRPSSP--APSAAT 405 Query: 402 TVPLPETTSQVLAA-RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQAR 460 + P P +S+ AA R V +A+K+EP A A + + T A Sbjct: 406 SRPSPFESSRTAAAPRPSPFEVD---RARKNEPKAEADA---------EITAKTPEFTAP 453 Query: 461 PVPSALEKAPAK 472 P+ + APA+ Sbjct: 454 AAPTPMSAAPAR 465 >UniRef50_B5ZIA7 DNA polymerase III, subunits gamma and tau n=10 Tax=Acetobacteraceae RepID=B5ZIA7_GLUDA Length = 687 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 166/383 (43%), Positives = 237/383 (61%), Gaps = 14/383 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RP T D++GQ+ + L N +LGR+ HA++ +G RGVGKT+ AR++A+ L Sbjct: 57 YRVLARKYRPTTLDDLIGQDSTVRILRNAFALGRVAHAFMLTGVRGVGKTTTARIIARAL 116 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC G TA PCGVC NC I R D++E+DAASRT V+D R++++ ++ P + Sbjct: 117 NCVGPDGTGGPTADPCGVCANCVAILADRHPDVLEMDAASRTGVDDVREIIEATRFRPMQ 176 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 GR KV++IDEVHMLSR++FNALLKTLEEPP V F+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 177 GRMKVFIIDEVHMLSRNAFNALLKTLEEPPAQVTFVFATTELRKVPVTVLSRCQRFDLRR 236 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA----SGDGQ-- 231 + + I E P AL L+ARAA+GS+RD LSL DQAIA GDG Sbjct: 237 VPQSDLAAHFGRIARAEGAECTPDALALIARAADGSVRDGLSLLDQAIAQGSVEGDGAAP 296 Query: 232 VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 + + V+ MLG D + L+EA++ +R +A+ +EA ARG + +L ++L L+H Sbjct: 297 IGAERVADMLGLADRGRVFDLLEAVLAGQPDRALAITDEAHARGADLGVMLGDVLELVHT 356 Query: 292 IAMVQLSPAALGN-DMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGV 349 ++ ++ PA + D+ E R LA + + +Q LL G E+ APDRR Sbjct: 357 VSRLKAVPALRQSADLPEAERERGGALADRLSVPVLGRTWQMLLKGLSEVEMAPDRREAA 416 Query: 350 EMTLLRALAFHPRMPLPEPEVPR 372 EM L+R L + +P P V R Sbjct: 417 EMILIR-LCYVADLPPPGDLVRR 438 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 150/358 (41%), Positives = 226/358 (63%), Gaps = 4/358 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y +ARKWRPQ+F+D+VGQEH+ L N + GR+HHA+LF+GTRGVGKT+ AR+LA+ Sbjct: 1 MAYIAMARKWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG CD+C++I G +D+ EIDAAS T V++ RD+++ VQY P G++ Sbjct: 61 TLNCKGSDPLHPCGECDSCKDIAGGNPMDVYEIDAASNTSVDNIRDVIERVQYPPVIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS +FNALLKTLEEPP HV F+ ATT+ K+P TILSR +F K L V Sbjct: 121 KIFIIDEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQRFDFKRLTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QIR +L +I +E I AL + A A+GS+RD L+ DQA A +++ ++V ++ Sbjct: 181 DQIRSRLRYICEQEGIKATDEALDIFAEKADGSMRDGLTYFDQAYAFTGNEMTAESVRSV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 LG + SL++++ + + ++++A GIE+ LL L + +L Sbjct: 241 LGIPPVELFFSLIQSIENHDIKGCFRMVDDAVKIGIEFIPLLDGFGKFLRNLLYARLDAF 300 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P AL N + + + A+++ DI + L+ + L Y+ + R+ VE T R Sbjct: 301 TPDAL-NITEELYTKYKSCAQSLTNGDILRISKMLIDLQGTLRYSTNPRLLVETTFAR 357 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 173/449 (38%), Positives = 251/449 (55%), Gaps = 24/449 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WRPQ DVVGQEH+ L N L ++ HAYLFSG RG GKTS A+++AK Sbjct: 1 MAYQALYRVWRPQVLKDVVGQEHITRTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C I+ G VD+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEQAPVEEPCNTCSTCTGIQDGSIVDVIEIDAASNNGVDEIRDIRDKVKFAPSGASY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + ++E I+ + +A +P AL ++ARA+EG +RDALSL DQAI+ D V+ V ++ Sbjct: 181 HTMIKRMEEIIEDGDLAVDPDALSMIARASEGGMRDALSLLDQAISYADTSVTLDDVLSI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D ++EA+++ + I+ + G + + + + L + MVQ +PA Sbjct: 241 IGAASQDLMYDVMEALLDQQVADGLTAIDRLMSDGKDPGRFMEDFIFLTRDLLMVQAAPA 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D + R LA + + + L ++++ +A + +EM +++A Sbjct: 301 LDESGDRKLGDQRFEILASKASQSWLFALMEKLNHFQQQMKWASHPAVFLEMFVVQACQM 360 Query: 360 HPRMPLPE--PEVPRQSFAPV-------------APTAVMTPTQVPPQPQSAPQ-QAPTV 403 R P PE RQ + + AP+ P P QP S Q QAP Sbjct: 361 PSREPEKAGLPEEVRQQISTLEHKLADLERRLQQAPS--QAPAGRPDQPASPSQPQAPVR 418 Query: 404 PLPETTSQVLAARQQLQRVQG----ATKA 428 P+ S A+R +QRV+G ATKA Sbjct: 419 KQPQAAS-TGASRANMQRVKGVLNEATKA 446 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 168/445 (37%), Positives = 240/445 (53%), Gaps = 25/445 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLARKWRPQ F DVVGQ+HV+ L N + RI HA+LFSG RGVGKTSIAR+LAK Sbjct: 1 MDYLVLARKWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G TPC VC NCREI +G +D+ EID AS +++ R+L + +++ P R+ Sbjct: 61 AINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+R +FNALLKTLEEPP HV F+ ATT+ K+P TILSRC F + L + Sbjct: 121 KVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL I E I L +A A +GS+RD+ S+ DQ I+ + +AV + Sbjct: 181 RQIAEQLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEEL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D L EA++ + + + ++ E G++ +L + +V++ Sbjct: 241 LGRTDRRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGP 300 Query: 301 AL------GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 GND++ IE ++ E++R +Q LL + + + R+ +E + Sbjct: 301 QQELLDLPGNDLSGIEAQVAEVSRET----LQQLLDILLAEEESARRSHNPRLHLEAIVC 356 Query: 355 RALAFHPRMPLPEP-------EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV---- 403 R P +P+ E E S AP V P S P + TV Sbjct: 357 RMAGLPPALPIEEILSRMEDLETRLASSAPCLSETVPGAASFSP---SKPGNSTTVRERP 413 Query: 404 -PLPETTSQVLAARQQLQRVQGATK 427 LP ++ + R+ + +QGA + Sbjct: 414 LTLPIVRTEDRSVREPMAELQGAVR 438 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 138/362 (38%), Positives = 230/362 (63%), Gaps = 9/362 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ L R+WRP+ F D+VGQEHV+T L N +S RI HAYLFSG RG GKTS+A++ AK Sbjct: 1 MDYQALYRQWRPKYFRDLVGQEHVVTTLKNAISQSRISHAYLFSGPRGTGKTSVAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG C C E ++G F+D++EIDAAS +++ R++ D+V Y+P+ G + Sbjct: 61 ALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPP++V F+LATT+P KLP+T+LSRC +F L Sbjct: 121 KVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTEPHKLPMTVLSRCQRFDFYRLST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDG-QVSTQAVS 238 +I QL+++++ ++++ +L ++A+ ++G +RDALSL DQ+++ G G Q+ V Sbjct: 181 SKIEKQLQNVIDSKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGSGEQLKVDHVL 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL- 297 + GT+ +D L+ A+ E + +++ ++ + + G ++ L +++ L + + +L Sbjct: 241 EVTGTVSEDTFYDLLMALKEGDLAQILNIVQQLSDSGKDFGQFLNDLIVYLRDLLLFKLK 300 Query: 298 --SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 S L + ++ ++L + ++ L ++ + ++ +RR+ VEM R Sbjct: 301 GPSDQLLWGSVDSV----KKLHKYFTKDELISMIDFLSEKQQAMKWSQNRRLIVEMAFYR 356 Query: 356 AL 357 + Sbjct: 357 II 358 >UniRef50_D1AZL2 DNA polymerase III, subunits gamma and tau n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZL2_SULD5 Length = 546 Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 138/289 (47%), Positives = 191/289 (66%), Gaps = 2/289 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M +QVLA K+RP +F ++GQE + L++ L+ R+ HAYLFSG RG GKTS AR+ AK Sbjct: 1 MPHQVLALKYRPSSFDKLIGQEAITQTLSSALNQNRLSHAYLFSGLRGSGKTSTARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G ATPC VC++C + R +D+IE+DAAS ++D R+L+++ +Y P+ RF Sbjct: 61 ALVCEQGPNATPCDVCEHCLSANENRHIDIIEMDAASNRGIDDIRELIESTKYKPSSARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHML+ +FNALLKTLEEPP +VKF+LATTDP KLP TILSR F K + Sbjct: 121 KIFIIDEVHMLTTQAFNALLKTLEEPPSYVKFILATTDPLKLPATILSRVQHFRFKQIKQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + L HILN E I +E AL++L+RA GSLRD L+L DQAI G ++ + V+ M Sbjct: 181 SDVINHLCHILNLEKIEYEKEALEMLSRAGNGSLRDTLTLLDQAIIYSKGYITPEHVATM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 LG LD Q +L A++ N ++ LI E E ++ E++ L Sbjct: 241 LGLLDPKQLETLFSAILNGNKTELLGLIK--TLESYECEVVMDELIAYL 287 >UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCQ4_PLALI Length = 682 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 133/288 (46%), Positives = 192/288 (66%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y VLAR++RPQTF++VVGQ+ + L N + GR+ HAYLF+G RGVGKTS+AR+ AK Sbjct: 5 NYTVLARRFRPQTFSEVVGQDRIAQTLRNAILEGRVAHAYLFTGARGVGKTSMARIFAKA 64 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC + A PC C+ CR + G+ VD+ EID AS ++D R L NV R R+K Sbjct: 65 LNCPNAVEAVPCNTCEICRAVSAGQDVDVSEIDGASNRGIDDIRTLRANVNVKSMRTRYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHML++ +FNALLKTLEEPP+ VKF+ TT+P KLP TILSRC +F +++E Sbjct: 125 VYIIDEVHMLTKEAFNALLKTLEEPPQGVKFIFCTTEPNKLPDTILSRCQRFDFGTVNIE 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L I N E + A++L++R A GS+RD+ SL DQ +A G V+ V +L Sbjct: 185 SIGERLRQIANTEGFQVDDEAIELVSRRANGSMRDSQSLFDQVLAFGHQHVTVADVHRLL 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 GT DD+ + LV+A+++ + R + +++A G++ +AL +++ L Sbjct: 245 GTASDDRVIELVQALIDRHAARALEALDQAILDGVQLDALTDQLISYL 292 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 165/469 (35%), Positives = 259/469 (55%), Gaps = 44/469 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N ++ G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMYRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + PC CD C+ I QG D+IEIDAAS V++ R++ D V+YAP++ ++ Sbjct: 61 AINCPNSVDGEPCNECDICKSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L ++ +HI ++ A+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 DQIIERLRYVAESQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++D+ +L+ + + A ++ A G E L+ +++ + M + + Sbjct: 241 TGSVDEASLNALLNDVANGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKTAQR 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 D A + + L + I L TL+ R ++ ++ + E+ L++ Sbjct: 301 ETEYD-ALMAFDLDTLYKM-----IDLINDTLVSVR----FSVNQNVHFEVLLVKM---- 346 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP-----ETTSQVLAA 415 E+ ++ APVA P + QAP+ P P + +S +L Sbjct: 347 -------AELIKEGDAPVAN---------PDMHSANAHQAPSAPQPAQQNNDVSSALLQR 390 Query: 416 RQQLQ------RVQGATKAK---KSEPAAATRARPVNNAALERLASVTD 455 + L+ + QG T K + + R R N+ ++ ++A V D Sbjct: 391 LEHLEQELNALKQQGVTSTNTPPKQKSNSRGRRRSKNSYSMTQIAKVLD 439 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 148/355 (41%), Positives = 218/355 (61%), Gaps = 1/355 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRPQTF D+VGQEH+ LAN ++ G I HAYLF+G RG GKTS A++LAK Sbjct: 1 MAYIALYRKWRPQTFKDLVGQEHISRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCG C+ CR+I G +D+ EIDAAS +++ RDL + V++AP GR+ Sbjct: 61 ALNCEHGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ K+P TI SRC ++ K + V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I +L +I E + E AL ++A A+G +RDALS+ DQ A +G ++ + V + Sbjct: 181 EEIESRLRYITAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALAEGTITAERVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D + +A+ N + + ++ E G + + +L E+ L + + Q + Sbjct: 241 LGLVGHDWIYKMTKALAARNVQEALQILAELLRDGKDLKQILSELSLHLRSLMIFQAAGT 300 Query: 301 ALGNDMAA-IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 D+ A + +++ A+ P + L E+ ++P R+ VE+ L+ Sbjct: 301 VEAMDLYAEPQDVLQDQAKLFAPEVLPRMIARLHEAMTEMKWSPQPRITVEVALM 355 >UniRef50_Q1GKB7 DNA polymerase III subunits gamma and tau n=4 Tax=Rhodobacteraceae RepID=Q1GKB7_SILST Length = 608 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 150/333 (45%), Positives = 213/333 (63%), Gaps = 18/333 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+TFAD+VGQ+ ++ L N + RI A++ +G RG GKT+ AR++AKG+ Sbjct: 17 YQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTARIIAKGM 76 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G T PCG C++C I +GR VD++E+DAASRT V D R+++D+V Y A Sbjct: 77 NCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDIREIIDSVAYRAAS 136 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+K+Y+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 137 ARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRR 196 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ E + L I E AL L+ RAAEGS RDA SL DQAI+ G G+ + V Sbjct: 197 IEPEVMIDLLRRIATSEQAEIADDALALITRAAEGSARDATSLLDQAISHGAGETTADQV 256 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 AMLG D + L L++ ++ + + ++ A G + A+L ++ + H +++V++ Sbjct: 257 RAMLGLADRGRVLDLMDMILRGDAAAALTELSAQYAEGADPMAVLRDLAEITHWVSVVKI 316 Query: 298 SPAAL------------GNDMAAIELRMRELAR 318 +P A G DMAA L MR L R Sbjct: 317 TPDAAEDPTISPDERARGQDMAA-RLPMRVLTR 348 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 284 bits (726), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 142/300 (47%), Positives = 190/300 (63%), Gaps = 1/300 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R WRPQ F +VGQEH+ AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MSYVALYRTWRPQDFDGLVGQEHIRKALTNALESGRISHAYLFTGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PC CD+CREI +G D+IEIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTPHPCNTCDHCREITEGTSADVIEIDAASNRGIDEIRKLREQVHFAPVSSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+P TI SRC +F + + V Sbjct: 121 KVYIIDEVHMITADAFNALLKTLEEPPEHVVFILATTEPQKIPTTIHSRCQRFDFRRVTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L+ + +I EP AL+L+A A+G +RDA+ L DQ + V+ + V + Sbjct: 181 DDIAAHLQKVAEGSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMAN-PVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +LVE + + + L+N+ G + +L E+L + + + Q PA Sbjct: 240 LGIAGRDTMRALVEKIGRRDLPAALDLLNQLMDDGKDVTQVLTELLEYMRALLLYQADPA 299 >UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C591_HYPNA Length = 578 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 175/412 (42%), Positives = 235/412 (57%), Gaps = 28/412 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RP+ F D++GQE ++ L+N GRI H ++ +G RGVGKT+ ARLLA+G Sbjct: 28 TYEVLARKYRPRRFEDLIGQEAMVRTLSNAFETGRIAHGFMLTGVRGVGKTTTARLLARG 87 Query: 62 LNCET--------------GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDL 107 LN E I P G ++C I R D++E+DAASRT V D RDL Sbjct: 88 LNYEPKADAKGKKGKAAGPSIHLDPPG--EHCDAIMASRHPDVLELDAASRTGVADMRDL 145 Query: 108 LDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTIL 167 LD+ +Y P R+KVY+IDEVHMLS SFNALLKTLEEPP H+KF+ ATT+ +K+PVT+L Sbjct: 146 LDSARYGPVSARYKVYIIDEVHMLSNASFNALLKTLEEPPPHLKFIFATTEIRKVPVTVL 205 Query: 168 SRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA- 226 SRC +F LK LD ++ L ++ E AL L+ARAAEGS+RD LSL DQ I Sbjct: 206 SRCQRFDLKRLDSGELSRHLGNVAQSEGANVSEEALALIARAAEGSVRDGLSLLDQGIVQ 265 Query: 227 SGDG-QVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 + DG +VS AV AMLG D + L VE V + + +A + E A G + +L ++ Sbjct: 266 TTDGEEVSGAAVRAMLGLGDRARLLDAVEKAVGGDAKGALAEVREQVAGGADPAVILKDI 325 Query: 286 LGLLHRIAMVQLSPAALGNDM-----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELP 340 L + I++ Q A G+D A R R LA+ + P +Q LL G +L Sbjct: 326 LDIAADISVAQ----ATGDDWTQAGPADWANRTRALAQRLTPAQAARNWQLLLSGYGDLQ 381 Query: 341 YAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ 392 APD + M +LR LA +P PE + P P + PPQ Sbjct: 382 VAPDPATALNMVILR-LAAASTLPSPEEAARMIAEGSRPPGKDNPPLKAPPQ 432 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 142/300 (47%), Positives = 196/300 (65%), Gaps = 1/300 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L R+WRP+TFA+VVGQEH+ L N L GR+ HAYLF G RG GKTS A++LA+ + Sbjct: 4 YQALYRQWRPRTFAEVVGQEHITRTLRNALRTGRLVHAYLFCGPRGTGKTSTAKILARAI 63 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C NCR I G +D++E+DAAS +++ R+L++ + P GR+KV Sbjct: 64 NCLAPREGEPCNECANCRRILAGNSLDVLEMDAASNRGIDEIRNLIEKIPLGPVEGRYKV 123 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML++ +FNALLKTLEEPP H F+LATT+P+K+ TILSRC +F L V+ Sbjct: 124 YIIDEVHMLTQEAFNALLKTLEEPPAHAVFILATTEPRKVLPTILSRCQRFDFHPLTVQA 183 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD-GQVSTQAVSAML 241 I +L+ + + EP AL LL+R A G LRDALSL DQ +ASG G V+ V+ L Sbjct: 184 IAGRLQEVAAANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASGTRGPVTAGQVAVTL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 GT D L+L +A+ +G V+ L+++A A GIE LL ++L + ++++ P A Sbjct: 244 GTARLDTLLALTDALATGDGAGVLNLVDKALASGIEPRRLLEDLLDHTRNLLLLKVDPGA 303 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 195/642 (30%), Positives = 296/642 (46%), Gaps = 100/642 (15%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+VLA K+RPQTF +VVGQ HV T L N + GR+ HA L +G RG GKT+IAR+LAK Sbjct: 1 MSYRVLALKYRPQTFDEVVGQPHVTTTLKNAILSGRVPHAILLTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCETG T TPC +C C I G VD+ EID AS V+ R+L +NV Y P+ +F Sbjct: 61 AMNCETGPTPTPCNICKTCTNITAGSAVDVFEIDGASNNSVDQVRELRENVAYMPSSSKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP+HV F+ ATT+ K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTEVHKIPVTILSRCQRHDLGRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA---------SGDGQ 231 QI L + E + + LLA A+GS+RD+LSL D+ + SG Sbjct: 181 AQISAHLMTLAAAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQAQTSEQTSGPRA 240 Query: 232 VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 + + LG +D L +A+++ G ++ L++ G++ + ++ Sbjct: 241 IDDDKILGTLGIIDKTLVFDLADAIIQNRGADIIDLVDRIHTLGLDLKRFYASLIRHFRN 300 Query: 292 IAMVQLSPAALGNDMAAIEL------RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDR 345 +A+V++S ND ++ RM L + + + TLL+ + + Sbjct: 301 LAVVKVS----SNDKNTCDISDHDRQRMAALTAPLSQSFLNQILNTLLVDESLVKLSSHT 356 Query: 346 RMGVEMTLLRALAFHP----------------RMPLPEPEVPRQSFAPVAPTAVMTPTQV 389 R VEM LL+ + P R P+ + Q PV P Sbjct: 357 RTAVEMVLLKLVQIRPGIEIDLMIKRLDDLARRFDNPDFQALPQEERPVCP--------- 407 Query: 390 PPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER 449 PP+P+ AP P+ + + + A Q P +P Sbjct: 408 PPEPRKAPTSMDPHPISDDNGESVPAPQ---------------PGTTPSYKP-------- 444 Query: 450 LASVTDRVQ--ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 TDR+ + P P AP + A RW + A+ K L+ Sbjct: 445 ----TDRINVVSPPTPEPRTIAPPEDPAGRWNPFLKALADSLPFASAILSKGRLQKISNT 500 Query: 508 ELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLR-----SSQRH 562 ++ +L A +R ++ + +E V + + + LHL + + + Sbjct: 501 DIVVELNGTAFDRGRIESKRGE------IETVCHDYFGKP------LHLTLIGDCAPKEY 548 Query: 563 LNNRGAQQKL----------AEALSMLKGSTVELTIVEDDNP 594 N+ + KL A+A+ G+ V++ + E NP Sbjct: 549 GNDEKSPAKLRQEILNHPLVADAIKRFNGTVVDVKLNERSNP 590 >UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1W4_ABIDE Length = 522 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 144/380 (37%), Positives = 232/380 (61%), Gaps = 16/380 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP+ F +V GQ+ V+T L N + +I HAY+FSGTRG GKTS+A++ AK Sbjct: 1 MSYTALYRKFRPKGFDEVKGQDSVVTVLKNQIKHEKIGHAYMFSGTRGTGKTSVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE +PCGVC+ C++I +GR +D+IEIDAA+ V++ R++++ V+Y+P ++ Sbjct: 61 AVNCENTKDGSPCGVCETCKKIGEGRTLDVIEIDAATNNGVDNMREVIEEVKYSPTDTKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPE+ F+LATT+P K+ TI SRC ++ + + + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPEYAIFILATTEPHKVLPTIKSRCQKYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 E I +L+ ++++E +E AL+ +AR +GS+RDALSL DQ +A S D +++ V Sbjct: 181 ETISDRLKELMDKEGNTYEEEALKFIARKGDGSMRDALSLLDQCLAFSFDEKLTYDKVLN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG++D D L A+ + M + E + GI+ ++ + ++++S Sbjct: 241 VLGSVDTDLFNKLYIAIKRGDVTTCMDIAEEISMNGIDIGQFTLDFTWYFRNLLLLRVSK 300 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 AA + D A ++E+A+ D+ Y + ++ Y+ +R +E+ L+ Sbjct: 301 AAADRIEISTDKLA---ELKEVAKIGEENDLYRYIRIFSKLSADIKYSTSKRAELEIALI 357 Query: 355 RALAFHPRMPLPEPEVPRQS 374 ++ PE E R+S Sbjct: 358 -------KLCRPEMEEDRES 370 >UniRef50_B6BKU4 DNA polymerase III gamma and tau subunits DnaX n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKU4_9PROT Length = 585 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 131/256 (51%), Positives = 175/256 (68%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 S +VLARK+RP F +++GQ+ + L+ L R+ HAYLFSG RG GKTS AR+ AK Sbjct: 4 SSEVLARKYRPSNFDELIGQDTIAQTLSLALDSNRLSHAYLFSGLRGSGKTSTARIFAKA 63 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 L CE G++ PCGVC NC+ + R +D++E+DAAS K++D RDL++ +Y PA RFK Sbjct: 64 LICEQGMSHEPCGVCQNCKLAVENRHMDIVEMDAASSRKIDDIRDLIEQTKYRPASARFK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +++IDEVHML++ +FNALLKTLEEPP +VKF+LATTDP KLP TILSR F K++ + Sbjct: 124 IFIIDEVHMLTKEAFNALLKTLEEPPAYVKFILATTDPLKLPATILSRTQHFRFKSIATK 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I L HILN E I +E AL++LAR+ GSLRD L+L DQAI V V+ ML Sbjct: 184 KIIDHLAHILNLEEIKYETDALEILARSGNGSLRDTLTLLDQAIIYSKNHVDVNTVTDML 243 Query: 242 GTLDDDQALSLVEAMV 257 G +D + L A+ Sbjct: 244 GLVDPKFIMDLFSAVF 259 >UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK9_MARMM Length = 606 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 169/401 (42%), Positives = 236/401 (58%), Gaps = 9/401 (2%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 YQVLARK+RP TF D++GQ+ ++ L N + GRI HAY+ +G RGVGKT+ ARL+A+ Sbjct: 31 GYQVLARKYRPDTFEDLIGQDAMVRTLTNAFAAGRIAHAYMLTGVRGVGKTTTARLIARA 90 Query: 62 LNCET-GITATPCGVCD---NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T GI A + + +C I + VD++E+DAASRT V D R++L+ V+YAP Sbjct: 91 LNFQTDGIDAPSMALGEKGRHCDAIGRSAHVDVMEMDAASRTGVGDIREILEGVRYAPVS 150 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FNALLKTLEEPPEH KF+ ATT+ +K+PVT+LSRC +F LK Sbjct: 151 ARYKVYIIDEVHMLSTSAFNALLKTLEEPPEHAKFIFATTEIRKVPVTVLSRCQRFDLKR 210 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG---DGQVST 234 +D E + L+ I E + E L L+ARAAEGS+RDALSL DQAI G DG VS Sbjct: 211 IDREVLTDHLDRICGLEGASVERDGLSLIARAAEGSVRDALSLLDQAIVQGSDEDGPVSA 270 Query: 235 QAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAM 294 + MLG D + L L+E + +A ++ G + + ++L +H A Sbjct: 271 PQIRDMLGLADHARVLDLLEQTLTGKTADALAELSSLHDAGGDPVVITRDLLDYVHATAR 330 Query: 295 VQLS-PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 V+ + P A + A R+ LA + ++ LL G ++ APD EMT+ Sbjct: 331 VKAAGPGADLGEAADTVARIVTLAEGQTLGQLTRMWKILLTGLDDVRNAPDALAAAEMTV 390 Query: 354 LRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQ 394 LR LA +P PE + P A + + P +P+ Sbjct: 391 LR-LASAASLPPPEDAARLLAGMPRATSPASGAGEAPGKPE 430 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 149/364 (40%), Positives = 217/364 (59%), Gaps = 4/364 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q H+ L N ++ R+ HA SG RG GKT++AR+LAK Sbjct: 1 MSYLVLARKYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC G T PCGVC +C+EI VD+ EID AS VE R+L +NVQYAPA G + Sbjct: 61 AMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPALGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNALLKTLEEPP HV F+LATT+ K+PVTILSRC ++ K + + Sbjct: 121 KVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L + E+ E ++L +AR + G +RDALSL DQ +A G+ S + V + Sbjct: 181 DDIVGHLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--S 298 LG +L +A+++ + + +++ ARG + + ++ ++L L + +V+ Sbjct: 241 LGVAGRKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRD 300 Query: 299 PAALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 P L D+ E++ M+E P + L + +P R+ +E+ L+R Sbjct: 301 PGPL-LDIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQPRLALEVALIRIC 359 Query: 358 AFHP 361 P Sbjct: 360 EITP 363 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 130/294 (44%), Positives = 188/294 (63%), Gaps = 1/294 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP+ F++V+GQ H++ L N + GRI HAYLF GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPRNFSEVLGQNHIVRTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PC C C +D+IEIDAAS V+D R+L DN+ YAP+ ++KV Sbjct: 62 NCPNSVEGEPCNRCQICESANNNSLIDIIEIDAASNNSVDDVRELRDNIIYAPSICKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TILSRC +F K + + Sbjct: 122 YIIDEVHMLSGSAFNALLKTLEEPPSHAIFILATTEPNKIPATILSRCQRFDFKRIPSKV 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I + I + +I E RA+ ++AR GS+RDA+S+ +Q ++ D ++ V +LG Sbjct: 182 ISQNIGKIAKDSNINIENRAIAMIARHGNGSMRDAISILEQCVSYND-VLTYDDVCDILG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 T++DD +LV+ + + N + V+ I++ GI+ L+ ML L I + + Sbjct: 241 TVNDDTLYTLVKRINDRNAKEVINQIDKLMLYGIDVSNLIKAMLSFLRDIVIYK 294 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 134/286 (46%), Positives = 193/286 (67%), Gaps = 1/286 (0%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 L RK+RPQTF +VVGQ HV L L +I HAYLF+G +G GKTS AR+ AKGLNCE Sbjct: 3 LYRKYRPQTFEEVVGQSHVTEILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKGLNCE 62 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 TGIT+ PC C++C+ I +G +D+IEIDAAS V++ R+L + V+Y PA+ R+KVY+I Sbjct: 63 TGITSKPCNECESCKLINEGHSLDVIEIDAASNRGVDEIRELRERVKYRPAQSRYKVYII 122 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DE HML+R +FNALLKTLEEPPE+V F+LATTDPQK+P T+LSRC +F K L +++ Sbjct: 123 DEAHMLTREAFNALLKTLEEPPEYVVFILATTDPQKIPPTVLSRCQRFRFKKLTSDEVFQ 182 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 LE++ E +++ AL+L+A ++G++RDAL+L +Q +G+VS + +L ++ Sbjct: 183 ILENVCKSEGFSYQREALELIAEVSDGAVRDALNLLEQISVVDEGKVSIKTARFLLNVVE 242 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 D+ L L++ A+ + + + E G+E L M L+ R Sbjct: 243 DEVILDLLKTAF-ADMDEAVERLAELMESGVEPMELFRTMKSLVRR 287 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 154/385 (40%), Positives = 225/385 (58%), Gaps = 6/385 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q+ V L N ++ GR+ HA LF+G RG GKT+IAR+LAK Sbjct: 1 MSYLVLARKYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G T TPC C +C EI G D+ EID AS V+ R+L NV++ PA + Sbjct: 61 AMNCEKGPTPTPCCACRSCLEIASGNATDVFEIDGASNNSVDQVRELRGNVKFMPAHSPY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP HV F ATT+P K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + LE + +E+I E ++L+L+A A GS+RD+LSL DQ ++S G VS + V Sbjct: 181 DPLVAHLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + L A++ + + +++ G + + EMLG + MV+L Sbjct: 241 LGIIDREVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHFRDLLMVKLGVR 300 Query: 301 A--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A L + +M+ R + + +L + ++ ++ VEM ++ L Sbjct: 301 AERLASLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKLLH 360 Query: 359 FHPRMPLP----EPEVPRQSFAPVA 379 P +P+ + + R+SFA +A Sbjct: 361 TKPVLPIDTLIQKVDALRKSFAQLA 385 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 149/363 (41%), Positives = 222/363 (61%), Gaps = 13/363 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++ AK Sbjct: 1 MSYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C CR I G +++IEIDAAS V++ R + + V+Y P G++ Sbjct: 61 AVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 E I +L ++ +E + E RA++ +A+AA+GS+RDALSL DQ IA GQ ++ V Sbjct: 181 ETISARLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG +D + L+ ++E N + +I+E G E + + L + +VQ S Sbjct: 241 TLGAVDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSS- 299 Query: 300 AALGNDMA-AIELRMRELA-----RTIPPTDIQLYYQTLLIG-RKELPYAPDRRMGVEMT 352 +DM +++ LA + TDI + Y + ++ YA +R+ +E+ Sbjct: 300 ----DDMEDVLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIRYAVQKRILIEIA 355 Query: 353 LLR 355 +++ Sbjct: 356 VIK 358 >UniRef50_C3MC56 DNA polymerase III, subunits gamma and tau n=80 Tax=Alphaproteobacteria RepID=C3MC56_RHISN Length = 645 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 156/374 (41%), Positives = 222/374 (59%), Gaps = 10/374 (2%) Query: 2 SYQVLARKWRPQTFAD-VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 +Y+VLARK+RP+ F+D +VGQE ++ L N GRI AY+ +G RGVGKT+ AR+LA+ Sbjct: 39 AYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILAR 98 Query: 61 GLNCETGITATPCGVC----DNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 LN +T P ++C+ I GR VD+IE+DAAS T ++D R++++ V+Y P Sbjct: 99 ALNYKTAEIDKPTIDLRIPGEHCQAIMDGRHVDVIEMDAASHTGIDDIREIIEQVRYRPV 158 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+KVY+IDEVHMLS +FN LLKTLEEPPEHVKF+ ATT+ +K+P+T+LSRC +F L+ Sbjct: 159 SARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLR 218 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 + + ILN+E + EP AL ++ARAAEGS RD LSL DQAIA G G V + Sbjct: 219 RISASDLVGLFSTILNKEAVRFEPEALAMVARAAEGSARDGLSLLDQAIAHGGGSVEMET 278 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V +MLG D + + L E +V+ + + G +L ++ H + ++ Sbjct: 279 VRSMLGLADRARIVDLFEHIVKGDAAAALGEFAAQYEAGANPTVVLTDLADFTHLVTRMK 338 Query: 297 LSPAALGNDMAAIELRMR---ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A ND + E+ R E A ++ T + +Q LL G E + EM L Sbjct: 339 YVPEA-ANDQSFSEIERRRGAEFAGSVAVTTLSRIWQMLLKGIPEAESSARPAGAAEMVL 397 Query: 354 LRALAFHPRMPLPE 367 +R LA +P PE Sbjct: 398 IR-LAHAAHLPSPE 410 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 142/296 (47%), Positives = 187/296 (63%), Gaps = 1/296 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R WRPQ F D+VGQ + AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MAYVALYRTWRPQDFDDLVGQAPIKKALTNALETGRISHAYLFAGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PC C NCREI +G D++EIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTAHPCNQCSNCREITEGTCGDVVEIDAASNRGIDEIRKLREQVYFAPTSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+ TILSRC +F + V Sbjct: 121 KVYIIDEVHMITTDAFNALLKTLEEPPEHVVFILATTEPQKILNTILSRCQRFDFRRATV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I LE + HI EP AL+L+A A+G LRDALSL DQ V+ + V + Sbjct: 181 DEIAEHLEKVAKGSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMAS-PVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 LG + ++ LV + + N + + + +G E E +L E+L + + Q Sbjct: 240 LGLVGREKLRELVTRIGQKNLSGALDALGQLLEQGKEMEQILAELLEYFRALLLYQ 295 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 155/372 (41%), Positives = 220/372 (59%), Gaps = 7/372 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP TF++VVGQEHV LAN + R+HHA+LF G RGVGKT+ AR+L K Sbjct: 1 MSYVVLARKYRPNTFSEVVGQEHVTRTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C I G VD E+D AS ++ R+L + V+Y PA R Sbjct: 61 ALNCERGPTAEPCGSCVACETITNGTAVDYFEMDGASNRGIDAIRELTEAVRYQPAVLRK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TILSRC ++ K + Sbjct: 121 KVYVIDEVHMLTTEAFNALLKTLEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 ++ L I E I + A+ L+ R + GS+RD+LSL DQ I+ G + V+ Sbjct: 181 PKLIEHLRRIFAAEEIEVDSGAISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +LV A+ E + + + + A ARG++ L ++ L +A++Q++P Sbjct: 241 VLGVADRSLTRTLVSALAEGDAKSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAP 300 Query: 300 AAL----GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 A G++ A EL RE A + + + ++ +L R+ +++ L+ Sbjct: 301 EAEGLIDGSEEEAAEL--REHAGRLSRERVTQMFDRMVQACNDLADTQMPRLVLDLALID 358 Query: 356 ALAFHPRMPLPE 367 A P +PL + Sbjct: 359 VAALEPVLPLGD 370 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 134/329 (40%), Positives = 207/329 (62%), Gaps = 3/329 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ F D+VGQE V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MSYQALYRVWRPQRFMDLVGQEMVTKTLKNAIITHQTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I +GR D+IEIDAAS VE+ RD+ D V+YAP + Sbjct: 61 AINCRFSKEGEPCNECETCKAITEGRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTEADY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TI+SR +F K + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPATIISRTQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I ++ +IL+++++ ++ +AL+++A+AAEG +RDALSL DQ I+ GD V+ + Sbjct: 181 ESILQRMIYILDQKNVDYDDKALKVIAKAAEGGMRDALSLLDQVISFGDNNVTLDNALLV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++ + + ++ ++ + + I + +G + L+ +++ + + Q +P Sbjct: 241 TGSVTQESLFNYLKFVLSKDTTNALKEIQQIVEQGKDANRLIEDLINYCRDLLLYQQAPE 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLY 328 + + ++ ++ + +EL++ I T QLY Sbjct: 301 MVSDGELGLLDDKFKELSQQINVT--QLY 327 >UniRef50_A7ZDZ3 DNA polymerase III subunit tau n=18 Tax=Campylobacter RepID=A7ZDZ3_CAMC1 Length = 554 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 131/267 (49%), Positives = 183/267 (68%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LA K+RP+ F +++GQE V +L + L R+ HAYLFSG RG GKTS AR+ AK L Sbjct: 2 QALALKYRPKNFDELIGQEAVSKSLTHALDENRVSHAYLFSGLRGSGKTSSARIFAKALV 61 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE G T+ PC VC C + R +D+IE+DAAS K++D R+L++ +YAP R+K++ Sbjct: 62 CEKGPTSRPCEVCAQCVMANESRHMDIIEMDAASHRKIDDIRELIEQTKYAPTAARYKIF 121 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML++ +FNALLKTLEEPP +VKF+LATTDP KLP T+LSR F K + +I Sbjct: 122 IIDEVHMLTKEAFNALLKTLEEPPSYVKFILATTDPLKLPTTVLSRTQHFRFKQISRYEI 181 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 LE IL++E +++E AL++LAR+ GSLRD L+L DQAI G G ++ +V+AMLG Sbjct: 182 VKHLEFILSKEGVSYEREALEILARSGGGSLRDTLTLLDQAIIYGAGNITKSSVAAMLGL 241 Query: 244 LDDDQALSLVEAMVEANGERVMALINE 270 LD + ++E + A+ + L+ E Sbjct: 242 LDPSRIEQIIEHVANADKNAIRVLVTE 268 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 143/363 (39%), Positives = 224/363 (61%), Gaps = 13/363 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT++A++ AK Sbjct: 1 MSYQALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C +CR I +G +++IEIDAAS V++ R + + V Y P GR+ Sbjct: 61 AVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 + I +L ++ +EH+ E RA++ +A+A +GS+RDALSL DQ IA G+ ++ + V Sbjct: 181 DTIASRLSDLMEQEHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFHLGEKLTYENVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D + L+ +++ + + ++ E G E L+ + + + ++Q S Sbjct: 241 VLGAVDTEVFSRLLRRILDEDVTGAIRILGELIDEGRELSQLVNDFTWYMRNLLLLQSS- 299 Query: 300 AALGNDMAAI------ELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT 352 +DM + L ++E A + P + Y + ++ +A +R+ VE+ Sbjct: 300 ----DDMEEVLDISKDNLEALKEEAALVKPETLIRYIRVFSELSSQVKFASQKRIMVEIA 355 Query: 353 LLR 355 +++ Sbjct: 356 IIK 358 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 132/300 (44%), Positives = 192/300 (64%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+TF +++GQEH+ L N + GR+ HAY+F G RG GKT+ A++LAK Sbjct: 1 MTYLALYREWRPRTFGEIIGQEHITRTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC A PC C++CR + +G VD+IEIDAAS +++ RDL + +++APA GR+ Sbjct: 61 ALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 +VY+IDEVHML+ +FNALLKTLEEPP H +LATT+P ++P+TILSRC +F + + Sbjct: 121 RVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLTILSRCQRFDFRRIIP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ + + E AL+L+ARAAEG LRDALS+ DQA A G +V+ V + Sbjct: 181 ADIIKRLKEVAAGARLEVEEEALRLIARAAEGGLRDALSILDQAAAFGGMKVTEAGVHQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ D + + R + L++E A G + E+ G L + + ++SP Sbjct: 241 LGTVRTDALDRMAGCLAAGEAGRALRLVSELAGEGKDLRLFARELAGYLRALLLEKISPG 300 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 139/357 (38%), Positives = 218/357 (61%), Gaps = 11/357 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R +RP+ F DV GQ+ ++ L N L +I HAY+FSG RG GKTS+A+++AK Sbjct: 1 MSYVALYRTYRPKFFKDVFGQKVIVQTLQNALLNEKIGHAYIFSGPRGTGKTSVAKIVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG CD C +++G D+IEIDAAS V++ RDL D V+YAP+ G++ Sbjct: 61 ALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASNNGVDEIRDLRDKVKYAPSIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP++V F+LATT+P K+P TILSRC +F K +++ Sbjct: 121 KVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTEPHKVPATILSRCQRFDFKNIEM 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L+ I+N+E++ P AL +AR AEG +RDALSL DQ ++ + +++ + + + Sbjct: 181 DQIEENLKQIINKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFTNDEITEEDIYTV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G L L++ + ++ + L+N+ G + ++ +++ L + + ++ P Sbjct: 241 SGGLSRRYINELLKVIYLKQPQKALDLLNQIIKDGKDIARMVSDIILALRDVLLDKIRPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 D+ + I P I Y L ++EL + +R +E+ L++ + Sbjct: 301 KKYPDL-----------KDIKPNLIYAYLDILNDLQQELKFTTSKRAYLELALIKMI 346 >UniRef50_Q98BM8 DNA polymerase III tau n=2 Tax=Mesorhizobium RepID=Q98BM8_RHILO Length = 604 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 149/360 (41%), Positives = 224/360 (62%), Gaps = 6/360 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RP F+++VGQE ++ L N + GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 18 AYRVLARKYRPSNFSELVGQEPMVRTLTNAFATGRIAQAWMLTGVRGVGKTTTARILARA 77 Query: 62 LNCETGITATP----CGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P + ++C+ I +GR VD+IE+DAAS T ++D RD+++ V+YAP Sbjct: 78 LNYKTATVDQPSVDLAVLGEHCQAIMEGRHVDVIEMDAASHTGIDDIRDIIERVRYAPVS 137 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+T+LSRC +F L+ Sbjct: 138 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPPHVKFIFATTEIRKVPITVLSRCQRFDLRR 197 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 +D + L I +E I+ + AL ++ARAAEGS RD+LS+ DQAIA G G VS +AV Sbjct: 198 IDAGALVAHLSSIAAKEGISVDDDALAMIARAAEGSARDSLSILDQAIAHGAGAVSAEAV 257 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 AMLG D + + L E +++ + +A G + A+L ++ H + ++ Sbjct: 258 RAMLGLADRARIVDLFEHVMKGDVAAALAEFRTQYDTGADPAAVLTDLAEFNHLVTRLRF 317 Query: 298 SPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 P A+ + + + R R + AR + + +Q LL G E+ + EM L+R Sbjct: 318 VPTAMDDASLSQDERQRGADFARALSVRVLSRTWQMLLKGIPEVQSSNRPVSAAEMVLIR 377 >UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococcales RepID=A9GQB3_SORC5 Length = 829 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 143/301 (47%), Positives = 197/301 (65%), Gaps = 5/301 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQ+F D+VGQEHV T LAN ++ R+ HA+LF+G RGVGKT+ AR+LAK Sbjct: 37 MSYVVLARKWRPQSFEDLVGQEHVSTTLANAIARDRVAHAFLFTGVRGVGKTTSARILAK 96 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TATPC C C EI G VD+ EID AS V++ R L +++ Y PAR RF Sbjct: 97 ALNCVHGPTATPCQTCAPCAEITVGADVDVQEIDGASYNGVDEVRKLQESLPYRPARDRF 156 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K++++DEVHMLS ++NA LKTLEEPP HVKF+ ATT+ K+PVTILSRC ++ K + Sbjct: 157 KIFIVDEVHMLSNAAWNAFLKTLEEPPPHVKFIFATTEVHKVPVTILSRCQRYDFKLIGA 216 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA----SGDGQVSTQA 236 + I +L +L++E I + AL LAR A GS+RDA+SL DQ IA SGD +++ + Sbjct: 217 QAIAARLRWVLDQEKIPADDPALSALAREAAGSMRDAMSLLDQVIAWVGTSGD-RITAEG 275 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V+ +LG D L A+V+ + + ++ E A G + + + L L + + + Sbjct: 276 VAKVLGVADRVVLHRLAGALVDGDPAACVRIVGELAQEGYDLPHVARDFLAHLRDLVVAK 335 Query: 297 L 297 + Sbjct: 336 V 336 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 145/286 (50%), Positives = 188/286 (65%), Gaps = 2/286 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP +F D+VGQ V L++ +S GRI HAYLFSG RG GKTS A++LAK Sbjct: 28 MAYIALYRQWRPGSFKDLVGQTAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAKILAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVC NC +I G +D+ EIDAAS +++ RDL + V++ PA GR+ Sbjct: 88 SLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREKVKFTPAEGRY 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TI SRC +F + + V Sbjct: 148 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHKVPATIQSRCQRFDFRRITV 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA-VSA 239 E+I +L ++ E I E AL+L+AR A+G +RDALSL DQ AS DG T A V Sbjct: 208 EEIEARLAYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQC-ASLDGDTLTAACVEE 266 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 LG + + L +A+ E V+ I E A G + LL E+ Sbjct: 267 NLGLIGHEPIYRLTKAIGERAKGEVLETIAELLALGKDPMQLLAEL 312 >UniRef50_Q30Q97 DNA polymerase III, tau subunit n=4 Tax=Epsilonproteobacteria RepID=Q30Q97_SULDN Length = 543 Score = 277 bits (709), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 128/244 (52%), Positives = 168/244 (68%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 S +VLARK+RP F +++GQE + L+ L R+ HAYLFSG RG GKTS AR+ +K Sbjct: 4 SSEVLARKYRPINFDELIGQESISQTLSLALDANRLSHAYLFSGLRGSGKTSTARIFSKA 63 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 L CE GI+ PCGVC NC + R +D++E+D AS K++D RDL++ +Y PA RFK Sbjct: 64 LICEKGISHKPCGVCQNCILALENRHIDIVEMDGASSRKIDDIRDLIEQTKYKPATARFK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +++IDEVHML++ +FNALLKTLEEPP +VKF+LATTDP KLP TILSR F K++ Sbjct: 124 IFIIDEVHMLTKEAFNALLKTLEEPPSYVKFILATTDPLKLPATILSRTQHFRFKSIATN 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I L HILN E I +E AL ++AR+ GSLRD L+L DQAI V + V+ ML Sbjct: 184 KIADHLSHILNLEGIKYESEALDIIARSGSGSLRDTLTLLDQAIIYSKNYVDVRTVTDML 243 Query: 242 GTLD 245 G +D Sbjct: 244 GLVD 247 >UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q394_9BACT Length = 558 Score = 277 bits (709), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 127/275 (46%), Positives = 181/275 (65%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLAR++RPQTF+D+VGQ ++ L N + R+ HAYLF+G RGVGKTS AR+L+K Sbjct: 1 MSYVVLARRYRPQTFSDIVGQAPIVKTLGNAIRTDRVAHAYLFAGPRGVGKTSTARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC VC+ C+ I +G +D++EID AS +++ R++ NV +AP+R R+ Sbjct: 61 ALNCVNGPTDTPCNVCNICQSISEGSDIDVLEIDGASNRGIDEIRNIRQNVGFAPSRARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++Y+IDEVHML+R +FNALLKTLEEPP HVKF+ ATT +LP T+ SRC +F K + V Sbjct: 121 RIYIIDEVHMLTREAFNALLKTLEEPPSHVKFIFATTAANRLPETVQSRCQRFDFKNISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I E E AL +A+ A+G LRD+ S+ DQ + D V++ V+ + Sbjct: 181 NDIEKHLLEICKTEGKQIESAALHTIAKYAKGGLRDSQSVLDQLFSFCDDNVTSADVNYV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARG 275 LG +DDD+ S+ E V + + ++++ G Sbjct: 241 LGYIDDDKIYSMFECFVNKDTSGALRIVDDILNEG 275 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 164/403 (40%), Positives = 233/403 (57%), Gaps = 8/403 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++ L R++RPQ F +VVGQEH+ L N + GR+HHAYL SG RG GKT++AR+LAK Sbjct: 1 MAHLALYREYRPQRFGEVVGQEHITRTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G +DLIEIDAAS +++ RDL D V +AP ++ Sbjct: 61 AVNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVELKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ QKLP+TILSRC F + L Sbjct: 121 KVYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 ++I +L + ++ + P AL +AR A+G +RDALSL DQ +A + +G+++ A Sbjct: 181 DEIVARLREVCGKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT DQ L+L ++ + + ++E G + L+ + L L + +V+L Sbjct: 241 VLGTAPLDQFLALDGHLLRGDVGAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEA 300 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGR--KELPYAPDRRMGVEMTLLR 355 A LG A+E +MR AR P + QL L+G+ EL +P R+ VE+ L+R Sbjct: 301 GAQVLGLPAEALE-QMR--ARAEPFAERQLIRAIRLLGQAETELRLSPSPRLLVEVALIR 357 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQ 398 E E + AP+ +PQ A Q Sbjct: 358 LTGLFTGAAADEGEDDGTAAEAAAPSRRRRQEHGEVRPQGASQ 400 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 132/294 (44%), Positives = 190/294 (64%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N +S G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMFRPQSFQDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C C+ I QG D+IEIDAAS V++ R++ D V+YAP+ ++ Sbjct: 61 AINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI +L + E+ + ++ AL+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 EQITDRLRFVAEEQQLDYDNEALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAM 294 G++D+ L + +++ N + ++ + G E L+ +M+ + M Sbjct: 241 TGSVDEAALNELFKDVIDGNVKNAFTRYHQFISEGKEVNRLINDMIYFVRDTIM 294 >UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE8_9BACT Length = 890 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 147/363 (40%), Positives = 217/363 (59%), Gaps = 6/363 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRPQTF D+ GQ+H+ + L N + R+ HAY+F GTRG+GKT+ AR+ AK Sbjct: 1 MTYQVLARKWRPQTFDDLAGQDHITSTLTNAIRNQRVGHAYIFVGTRGIGKTTSARIFAK 60 Query: 61 GLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCET PCG C NC EI QG +D+IEID AS V+D R + + QY PAR Sbjct: 61 ALNCETPRADLNPCGQCTNCTEITQGSSIDVIEIDGASNNSVDDIRQIREGAQYTPARCP 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+++IDEVHMLS ++NALLKTLEEPP H+KFL ATT+ ++ TILSRC + LK + Sbjct: 121 YKIFIIDEVHMLSNAAWNALLKTLEEPPPHIKFLFATTEVHRVLPTILSRCQRLELKPIP 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA--SGDGQVSTQAV 237 I +L+HI E++A E A+ ++R A G +RD LS+ DQ I+ SG+ +S Q V Sbjct: 181 RNVIAGRLKHICETENVAIEDSAINAISRTANGGMRDGLSILDQMISFCSGNEIISEQDV 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 + G ++ + A+++ ++ I+ A E L E+ L + ++ Sbjct: 241 IDVFGMSSSNELKLIASAILQNQAPALIEAIDTLAKAARNMEQLYSELFQLFRDVMILLE 300 Query: 298 SPAALGN--DMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 SP + D+ +E+ ++ ELA+ +Q L ++ + ++R +E+TLL Sbjct: 301 SPQQARSILDLEEVEIQQLYELAQLANNKLLQKLLNGFLDYDGKIRHTLNKRTYLEVTLL 360 Query: 355 RAL 357 R + Sbjct: 361 RIM 363 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 140/366 (38%), Positives = 224/366 (61%), Gaps = 21/366 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R +RPQTF DV GQE ++T L + + +I HAYLF G RG GKT++A+LLAK Sbjct: 3 MAYKSLYRTYRPQTFKDVAGQEAIITTLKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLAK 62 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC TG PCG C+NC++IE G D+IEIDAAS VE+ R L+D V+YAP +G++ Sbjct: 63 AVNC-TG-NPKPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQGQY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+P K+ TI+SRC +F L Sbjct: 121 KVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTEPHKILPTIISRCQRFDFTRLTD 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +++ +++++L EE ++ +L+L+AR A G +RDALS+ +Q +A D +S + + Sbjct: 181 QEMVQRMQYVLKEEGKTYDDGSLELIARLANGGMRDALSILEQCLAYNDDHLSINDIHTI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + D +L++ ++ N + ++++ GI+ + L +++ +L I + + + Sbjct: 241 YGIVSMDDKTNLLKVLLSKNMSESLKILDKMDKSGIDIKRLTFDLIDILKDIVVYRNTKD 300 Query: 301 A-----------------LGND--MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPY 341 A + +D + I++ M + I TD +Y++ L+ + Sbjct: 301 ASIMSVMTQKDLENIVPYITSDECFSFIDILMDASEKYIRATDPHIYFELALLRLCNQEH 360 Query: 342 APDRRM 347 AP +++ Sbjct: 361 APSQKI 366 >UniRef50_C3XGK3 DNA polymerase III gamma and tau n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGK3_9HELI Length = 939 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 130/280 (46%), Positives = 185/280 (66%), Gaps = 2/280 (0%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LA K+RP+TFA++VGQE V L L +I +AYLFSG RG GKTS AR+LA+ L CE Sbjct: 45 LALKYRPKTFAELVGQESVARTLCLALDSKKIANAYLFSGLRGSGKTSSARILARSLQCE 104 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 GIT++PCG C NC +G +D+ E+D AS K++D RDL++ +Y P GRFK+++I Sbjct: 105 RGITSSPCGTCANCIAALKGAHLDITELDGASNRKIDDMRDLIEQTKYKPTMGRFKIFII 164 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHML++ +FN+LLKTLEEPP +VKF+LATTDP K+P TILSR F K + +++ Sbjct: 165 DEVHMLTKEAFNSLLKTLEEPPNYVKFILATTDPLKVPATILSRTQHFRFKKIPTTALKN 224 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 L HIL +E+++ + +L +L R GSLRD L+L DQAI ++TQ ++ MLG LD Sbjct: 225 HLAHILQKENVSSDEASLDMLIRNGHGSLRDTLTLLDQAIVFCQNSLNTQKLADMLGALD 284 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 +L +A++ + + + + G E E +L E+ Sbjct: 285 PSAFDTLFQALLRKDMQECIKF--AKSLEGYEIEMILDEL 322 >UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Tax=Rhodopirellula baltica RepID=Q7UQ66_RHOBA Length = 676 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 190/297 (63%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY V+AR++RP+ F +VGQ+HV AL + R+ HAYLF+G RGVGKTS AR+ AK Sbjct: 36 SYVVVARRYRPRDFTQLVGQDHVARALQGAIETSRVGHAYLFTGARGVGKTSTARIFAKA 95 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LN G TA P D + I+ G VD+IEID AS +++ R L NV P+R R+K Sbjct: 96 LNHPDGPTANPDSESDVAQAIDSGEDVDVIEIDGASNRGIDEIRSLRANVGVRPSRSRYK 155 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHML+ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F ++ + Sbjct: 156 IYIIDEVHMLTGAAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFAPVESD 215 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I +L I+ E E AL+LLAR A GS+RD+ SL +Q ++ DG ++ V ML Sbjct: 216 KIVQRLREIVEAEDNTVEDEALELLARRAAGSMRDSQSLLEQVLSFSDGHLTADHVHTML 275 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 GT DD + L EAM + + ++ I+EA A G++ L +MLG + V + Sbjct: 276 GTADDQRLHRLAEAMADRDASAALSQIDEAIAAGVDAGRLAEQMLGYFRDLMAVAVG 332 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 189/320 (59%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WR Q F D+VGQ+ V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MAYQALYRVWRSQRFEDIVGQKAVTQTLKNAIVSHKTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G D+IEIDAAS VE+ R + D YAP + + Sbjct: 61 AINCPNSKDGEPCNECEMCRSITAGTQEDVIEIDAASNNGVEEIRFIRDRANYAPTKAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEP E V F+LATT+P K+P TI+SR +F K ++ Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPKESVIFILATTEPHKIPATIISRTQRFDFKRINT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL E I +EP AL ++AR+AEG +RDALS+ DQAI+ +G ++ + Sbjct: 181 ADIVEHLEFILKESTINYEPAALNVIARSAEGGMRDALSILDQAISFSEGTITLDDAMQV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G+L D+ S + A V+ + +N+ A G E L +ML + M Q +P Sbjct: 241 TGSLTDEMMDSYLSACVKKEVPEALEALNQILAAGKESRRFLEDMLQYCRDLLMYQQAPN 300 Query: 301 ALGNDMAAIELRMRELARTI 320 + + I ELA+T+ Sbjct: 301 LVEEQSSTIRSTFTELAQTV 320 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 162/452 (35%), Positives = 251/452 (55%), Gaps = 23/452 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLAR++RPQ F++VVGQ V AL N + R+ HAYLF+G RGVGKTS+AR+LAK Sbjct: 6 MQYTVLARRFRPQNFSEVVGQGMVAQALQNAIRGDRVAHAYLFTGARGVGKTSMARILAK 65 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG C+ C+ I G VD++EID AS ++D R L NV R ++ Sbjct: 66 ALNCPHTQDGIPCGECEVCQNIAVGSDVDVLEIDGASNRGIDDIRSLRANVNVRSMRSKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML++ +FNALLKTLEEPP +VKF+ TT+P KLP TILSRC +F ++ Sbjct: 126 KIYIIDEVHMLTKEAFNALLKTLEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEE 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E ++ A+QL+AR A GS+RD+ S+ DQ ++ G+ ++ ++V + Sbjct: 186 NSICDRLKQIAEAEQVSVADDAIQLVARRAGGSMRDSQSIFDQLLSFGESHLTAESVHRI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT D++ + L++A++E + + + A G++ + ++L L +++V + A Sbjct: 246 LGTASDERLIELIDALIEQKRDVALTHFDAALNAGVQLNEFVDQLLNYLRDLSVVA-TGA 304 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLY---YQTLLIGRKELPYAPDRRMGVEMTLLRA- 356 + ++ E+ L R IQ +Q L R + A R VE+ L+R Sbjct: 305 SQVTLLSISEMNRASLQRQAEAWGIQTCLAAFQILNEARNRMFRASHGRALVELALIRMS 364 Query: 357 -----------LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL 405 L+ ++P P RQ+ ++ AV P PP P PQ++ Sbjct: 365 LLEDLDLLSRFLSSGGQIP-AAPAAVRQASPSLSAAAVSQPVSEPPTP---PQESTE--- 417 Query: 406 PETTSQVLAARQQLQRVQGATKAKKSEPAAAT 437 P + + + + +++ + + S PAA T Sbjct: 418 PSSDQKKIEKKNEIESPVASESIESSPPAAET 449 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 275 bits (703), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 132/296 (44%), Positives = 200/296 (67%), Gaps = 3/296 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RPQTF +V GQEH++T L N + RI HAYLF+G RG GKT++A+LLAK Sbjct: 1 MSYKALYRSYRPQTFGEVAGQEHIVTTLKNAIKENRISHAYLFAGPRGTGKTTVAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC TG PC C NC+ I G D+IEIDAAS V++ RDL+D V+YAP G++ Sbjct: 61 ALNC-TG-ENPPCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGKY 118 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP H+ F+LATT+P K+ TI+SRC +F K ++ Sbjct: 119 KVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTEPHKILPTIISRCQRFDFKKVEN 178 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE++L E+ +E AL+ +A+ AEG +RDALS+ +Q +A + +++ ++V+ + Sbjct: 179 HDIISRLEYVLKSENKKYELSALESVAKLAEGGMRDALSILEQCLAY-NNELTVESVNMV 237 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 G L D +S ++ ++ + + V+ ++ + I+ + L +++ +L I + + Sbjct: 238 YGLLSMDNKISFIKQLLSKDIKGVLTSLDNMLSGSIDIKRLTFDLVDVLKDIIIYK 293 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 169/471 (35%), Positives = 247/471 (52%), Gaps = 46/471 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRP TF +++GQ+H+ + R+ HAYLFSG RG GKTS+AR+LAK Sbjct: 1 MAYLSLYRKWRPSTFKEIIGQKHISIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C NC+ I G +D+ EID AS V++ R L ++V+ P G Sbjct: 61 AVNCLDLKNGNPCNECANCKSINTGASMDVYEIDGASARGVDEIRVLRESVRTLPVAGNK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPP HV F+LATT+P K+P+TILSRC ++ + V Sbjct: 121 KVYIIDEVHMLTKEAFNALLKTLEEPPAHVLFILATTEPAKIPLTILSRCQRYEFHRISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI-ASGDGQVSTQAVSA 239 I+ L HI E H++ P A L+A AEG LRDALSL DQ AS ++S + V Sbjct: 181 NDIKEHLLHISQESHLSLTPEAAALIAVRAEGGLRDALSLLDQCSGASAGNELSAEIVYD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +Q + L +V + L + G E A+L ++L I + +++P Sbjct: 241 LLGLTDKEQIIDLFHMIVCGKSSATLQLFYKILQDGKEPSAILSDLLEHFRSIMICKVNP 300 Query: 300 -----AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 +A GN ++ I+ +EL+ + + +L E + RM EM LL Sbjct: 301 NAPELSAYGNKISVIQKDAQELSDAY----LDALFDSLHHSFSEANRSSSPRMSAEMGLL 356 Query: 355 R------------------ALAFHPRMPLPEPEVPRQSFAPVAPT----------AVMTP 386 R AL + + + +P+ P AP+ ++TP Sbjct: 357 RLCRLRGSQALDSLEERITALEKNVSVLMKSSTLPQTETIPAAPSPAILPPTISIPLVTP 416 Query: 387 TQVPPQPQSAPQQAPTVPLPETTSQVL---AARQQLQRVQGATKAKKSEPA 434 T + P P A T P++ +V+ A + +++ ATK+K S P Sbjct: 417 TALTPAP-----AASTTTCPDSPKEVVPPPPADKTPVKMEPATKSKPSLPC 462 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 132/305 (43%), Positives = 197/305 (64%), Gaps = 1/305 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R++RPQ FA+++GQ H++ L N L RI HAYLF G RG GKTS A++LAK Sbjct: 1 MAYRALYREYRPQLFAEIMGQRHIVDTLENALKNNRIAHAYLFCGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C + QG +D+IEIDAAS +++ RDL + V++AP G++ Sbjct: 61 ALNCHQIKGVEPCNKCSSCVSVAQGSAIDVIEIDAASNRGIDEIRDLKERVKFAPTGGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPPEHV F+LATT+P KLP+TILSRC +F K++ Sbjct: 121 KVYIVDEVHMLTIEAFNALLKTLEEPPEHVIFVLATTEPHKLPLTILSRCQRFDFKSIGA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD-GQVSTQAVSA 239 E + +L+ IL + + P AL+L+ +AAEG LRDALS+ DQ I + ++S + + Sbjct: 181 EPMTSRLKDILQDLQVKISPAALELIVQAAEGGLRDALSILDQIITFNNTAEISEEDIHN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT+++ SL+E ++ + + +I E G + + + + + + + P Sbjct: 241 LLGTVNERVINSLLEYLLRGDAGSSLQVIAEIFLEGKDLKMFVKGFASCVRDLLLQSIEP 300 Query: 300 AALGN 304 A+ N Sbjct: 301 TAIKN 305 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 139/355 (39%), Positives = 208/355 (58%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L R WRPQTF D+VGQ H++ L N + R+ HAYLF+G RG GKT+ A++LAK Sbjct: 1 MSHIALYRAWRPQTFQDMVGQRHIIQTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G PC CD CR I G +D+IEIDAAS +++ RD+ D V+YAP+ R+ Sbjct: 61 AVNCERGPAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSEVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + + Sbjct: 121 KVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+ +L I +E I E A+ +AR +EG +RDA+SL +Q A G +++ + Sbjct: 181 EEQSERLFEICRDEGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAFGGSRITLDGAVDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + DQ +L EA+ + N +M L+ G + + ++ + +++L+P Sbjct: 241 TGGMAADQFYALAEAIRDRNVAAIMPLVEGLTQAGKSADKCMENLIFYFRDLLVLKLAPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 + R R +A + TL + ++ +A + E+ L++ Sbjct: 301 GAVTERVVDAERFRGMADAFSSERLFKMIDTLNTYQSDMKHASQPQTLFEVALMK 355 >UniRef50_A8ERI6 DNA polymerase III, gamma and tau subunits n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERI6_ARCB4 Length = 643 Score = 274 bits (701), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 131/270 (48%), Positives = 179/270 (66%), Gaps = 8/270 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 +VLA K+RP+ F D++GQ + L+ L R+ HAYLFSG RG GKTS AR++AK L Sbjct: 9 RVLALKYRPKRFEDLIGQSTISQTLSLALDSNRLSHAYLFSGLRGSGKTSTARIMAKALL 68 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C G T+ PC +CDNC+ + +D+IE+DAAS ++D +DL+++ +Y P+ RFKV+ Sbjct: 69 CSQGPTSKPCDICDNCKSANASKHLDIIEMDAASNRGIDDIKDLIEHTKYKPSSARFKVF 128 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+ +FNALLKTLEEPP VKF+LATTDP KLP TILSR F + + Sbjct: 129 IIDEVHMLTTQAFNALLKTLEEPPGFVKFILATTDPLKLPATILSRTQHFRFNKIAQSDV 188 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 H L +ILN+E+I E AL++LAR+ +GSLRD L+L DQAI G+V+T +V MLG Sbjct: 189 VHHLSYILNKENIDFEQNALEILARSGQGSLRDTLTLLDQAIIFSKGKVNTTSVVDMLGL 248 Query: 244 LDD---DQALSLVEAMVEANGERVMALINE 270 +D D S++ N E + L+ E Sbjct: 249 IDPKMMDNIFSMI-----LNKEDITKLVKE 273 >UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Tax=Alphaproteobacteria RepID=C6ABP2_BARGA Length = 646 Score = 274 bits (700), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 220/360 (61%), Gaps = 6/360 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGVCD----NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V D +C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDSLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G V+ AV Sbjct: 189 IESKALSAHLRQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVNAIAV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFIMKGDVVNALHELRSQYEAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPILSRNWQMLLKGLQEVNQTARPLQAAEMLLIR 368 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 274 bits (700), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 128/300 (42%), Positives = 195/300 (65%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F +VVGQEH+ L N +S RI HAYLFSG RG GKT++AR+LAK Sbjct: 1 MAYLVLARKFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G T PCGVC+NC EI + VD++EID AS ++D R L +NV+++ A ++ Sbjct: 61 ALNCKNGPTIKPCGVCENCVEISKSSSVDVLEIDGASNNGIDDIRVLRENVKFSTASSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDE H ++ +FNALLKTLEEPP HV F++ATT+ K+P+TILSRC ++ K + Sbjct: 121 KIYIIDEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ ++ I EE + AL ++ A+ GS+RDALSL DQA++S G+++ + + Sbjct: 181 AEMVCAIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D +S+ + + + + ++ ++ E +G ++ L + + ++PA Sbjct: 241 LGLLPKDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINPA 300 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 130/356 (36%), Positives = 227/356 (63%), Gaps = 4/356 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 ++ L R +RPQ F DV+GQ+H++ L N + I HAYLF GTRG GKTS A++ ++ + Sbjct: 2 HKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC I PC C+ C + + +D++EIDAAS V+D R+L ++V+Y+PA ++KV Sbjct: 62 NCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS+ +FNALLKTLEEPP +V F+LATT+P K+P TILSRC ++ K + V+ Sbjct: 122 YIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + +++ I +E I + +AL L+AR ++G+LRDALS+ DQ ++ G+ ++ + V ++G Sbjct: 182 MTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +++ +Q L + +VE + ++ + ++NE G + L+ +++ + + ++S + L Sbjct: 242 SVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVS-SEL 300 Query: 303 GNDMAAIELRMREL---ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 ++ E + +L ++ I D+ L I + ++ + + R+ VE+T+++ Sbjct: 301 DEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMK 356 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 126/278 (45%), Positives = 184/278 (66%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARK RPQ F ++ GQE V+T L N + +GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 1 MSYIALARKLRPQNFDELSGQEFVVTTLKNSIEMGRVAHAYLFTGPRGVGKTSAARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + + PC C+NC EI G +D++EID AS +++ R+L + V++ P + +F Sbjct: 61 AVNCLEPVGSNPCNKCENCTEITSGTSMDVVEIDGASNRGIDEIRELREAVRFLPVKCKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNALLKTLEEPP++V F+LATTDPQ+LP TI+SRC ++ + Sbjct: 121 KVYIIDEVHMLTEHAFNALLKTLEEPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPF 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ E I ++ AL L+ R ++G +RD+LSL DQ IA G++ Q+ S + Sbjct: 181 EIMYDSLAGAMDTEGIEYDKDALNLVVRNSDGCMRDSLSLLDQIIAFTGGKLDEQSTSFL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEW 278 LG + L +++ E + I E + +G+ + Sbjct: 241 LGFSEKSLVDKLFALIIKEQPEEIPDAIEELSGKGVNF 278 >UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax=Bartonella RepID=A9IMY3_BART1 Length = 646 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 219/360 (60%), Gaps = 6/360 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGVCD----NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V D +C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDTLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G VS V Sbjct: 189 IEAKALSAHLHQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVSAAEV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFVMKGDVIHALHELRSQYDAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPVLSRNWQMLLKGLQEVNQTARPLQATEMLLIR 368 >UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 Tax=Hydrogenothermaceae RepID=B2V5N0_SULSY Length = 501 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 162/458 (35%), Positives = 249/458 (54%), Gaps = 41/458 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ +RK+RP++F +V+GQEHV+ L N + L R+ HAY+FSG RGVGKT+IAR+L+K Sbjct: 1 MAYEAFSRKYRPKSFQEVIGQEHVVKTLKNAVKLDRVSHAYIFSGPRGVGKTTIARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ + C C+NC EI++G F D+ EIDAAS ++D R + DNV Y P +G++ Sbjct: 61 VLNCKNPVDYESCNQCENCIEIDKGSFPDMYEIDAASNRGIDDIRMIRDNVGYQPIKGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDE HML++ +FNALLKTLEEPP F+LATT+ K+P TI SRC F K Sbjct: 121 KVYIIDEAHMLTKEAFNALLKTLEEPPPRNIFILATTELYKIPETIKSRCQTFIFKPPTK 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI++ L ILN E I +E A++LLA+ EG +RD+ SL DQA+ +G+++ + V + Sbjct: 181 EQIKNYLLRILNNEKIPYEEDAVELLAQELEGGMRDSASLLDQAVTYAEGKLTRKDVEEI 240 Query: 241 LGTLDDDQALSLVEAM----VEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 LG + + + V+ N + + L +E + W+ LL + L +A+ + Sbjct: 241 LGIVPYSYVQKFLRNIKDLKVDENIKLIDTLEDEGYDINVFWKQLLEAIHKTLIDLALDK 300 Query: 297 LSPAALGNDMAA------IELRMRELART-IPPTDIQLYYQTLL-------IGRKELPYA 342 D+ + I + ART P Q+Y+ T+L I R E +A Sbjct: 301 EDEIFSKEDLKSLIYLKTIFTKTYSEARTFFDPK--QIYHLTILKTLYLDSIKRIEQLFA 358 Query: 343 PDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPT 402 GV++ +P EPEV +Q P + Q + P++ Sbjct: 359 E----GVQV-----------VPKKEPEVLKQEIKP------QEKQETKQQEEIKPKEEQK 397 Query: 403 VPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRAR 440 L + SQ++ + + + + K+ E A + + Sbjct: 398 QDLNKIISQIIKNEKVIAVIIKNAEIKEDENAVYIKVK 435 >UniRef50_C8PKZ6 DNA polymerase III subunit tau n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKZ6_9PROT Length = 763 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 128/242 (52%), Positives = 171/242 (70%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LA K+RP++F ++GQ+ V +LA+ L GR+ HAYLFSG RG GKTS AR+ AK L Sbjct: 2 QALALKYRPKSFEQLIGQDAVAKSLAHALDSGRLSHAYLFSGLRGSGKTSTARIFAKALL 61 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C+ G T PC VCDNC +GR +D+IE+DAAS K++D R+L++ +Y PA RFK++ Sbjct: 62 CDKGPTGKPCEVCDNCVMANEGRHIDIIEMDAASHRKIDDIRELIEQTKYHPASARFKIF 121 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML++ + NALLKTLEEPP +VKF+LATTDP KLPVT+LSR F K + + Sbjct: 122 IIDEVHMLTKEASNALLKTLEEPPAYVKFILATTDPLKLPVTVLSRTQHFRFKPIAKSAV 181 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L IL E+IA+E AL++LAR+ GSLRD L+L DQAI ++ +A++ MLG Sbjct: 182 VAHLAQILKTENIAYEDGALEILARSGSGSLRDTLTLLDQAIIFSREGITQRAIADMLGL 241 Query: 244 LD 245 LD Sbjct: 242 LD 243 >UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX9_THEYD Length = 512 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/300 (43%), Positives = 197/300 (65%), Gaps = 2/300 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y LARK+RPQ F+D+ GQ+ V+ L N L G+I HAY+FSG +GVGKTS AR+LAK Sbjct: 1 MEYLGLARKYRPQKFSDLTGQDVVIKILQNSLQTGKISHAYVFSGPKGVGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C I++GR + +IEIDAAS T VE+ RDL +N++YA A G + Sbjct: 61 ALNC-IDSQNKPCDKCPSCVAIKEGRAMSVIEIDAASHTSVENIRDLRENIRYASAEGFY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDE HMLS+ +FNA LKTLEEPP HV F+LATT+P+K+P+T+LSRC K + + Sbjct: 120 KVYIIDEAHMLSQSAFNAFLKTLEEPPPHVVFVLATTEPRKIPLTVLSRCQHLQFKRIPI 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+ +L+ I N+E+I AL +A +EGS+RDAL++ DQ + S V+ V+ + Sbjct: 180 NLIKQRLQFICNQENINATEEALYTIASNSEGSMRDALTMLDQ-VTSFTENVTQDNVNLL 238 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D + L E +++ N E+++ + E G +++ L+ +++ + + +++ + Sbjct: 239 IGGTDVNVLYELTECLIDGNREKIILKVEELNNFGTDFKRLVGDLINFIRNTLISKITKS 298 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 139/363 (38%), Positives = 221/363 (60%), Gaps = 6/363 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RKWRP F DV GQ+ ++T L N ++ RI HAYLF GTRG GKTS+A++ AK Sbjct: 17 MSYQALYRKWRPDNFNDVKGQDTIVTTLRNQINADRIGHAYLFCGTRGTGKTSVAKIFAK 76 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PCG C C+ I G +++IEIDAAS V++ R + + VQY+P GRF Sbjct: 77 AVNCEHPVDGNPCGECPTCKAIAAGTSMNVIEIDAASNNGVDNIRQIREEVQYSPTEGRF 136 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 137 KVYIIDEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVAKIPITILSRCQRYDFHRITI 196 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 E I +L ++ E + E +A++ +A+AA+GS+RDALSL DQ +A G+ + + V Sbjct: 197 ETIAGRLSELMKAEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFYLGKDLKYENVLD 256 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D ++ ++ + M+L+ + +G + + + + L + +++ + Sbjct: 257 VLGAVDTAVFSKMLSTILSGDVAVCMSLMEDLIMQGRDLSQFVTDFIWYLRNLLLIKTTK 316 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQ--LYYQTLLIG-RKELPYAPDRRMGVEMTLL 354 A + + + + +L + DI +YY +L +L ++ +R+ E+T + Sbjct: 317 DAERIEDVIEVSADNLEDLKKDAQNVDIDTLMYYIRVLSELSNDLKFSTQKRVKTEITFI 376 Query: 355 RAL 357 + + Sbjct: 377 KLM 379 >UniRef50_D2R5L2 DNA polymerase III, subunits gamma and tau n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5L2_9PLAN Length = 715 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/293 (47%), Positives = 187/293 (63%), Gaps = 1/293 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V+AR++RPQ F +VGQ V AL N ++ GR+ HAYLF+G RGVGKTS AR+ +K L Sbjct: 42 YMVVARRYRPQDFTQLVGQAQVSQALGNAINTGRVGHAYLFTGARGVGKTSTARIFSKAL 101 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G T PCGVCD CR + G VD+IEID AS +++ R L V P+R RFK+ Sbjct: 102 NCVNGPTTQPCGVCDICRGVASGDDVDVIEIDGASNRGIDEIRQLRSGVNIRPSRARFKI 161 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPPEHVKF+ TT+ K+P+T+LSRC +F L + Sbjct: 162 YIIDEVHMLTTPAFNALLKTLEEPPEHVKFIFCTTEADKIPITVLSRCQRFDFAPLPSQA 221 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L I EH+ EP AL +LAR A GS+RD+ SL +Q ++ G Q++ V LG Sbjct: 222 ILDRLAAIAQNEHVEAEPEALAILARRAAGSMRDSQSLLEQLLSYGGKQITVDDVHRALG 281 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 T + +L+ A+ + + I+ AA G++ L ++LG L R AMV Sbjct: 282 TAKSSRIATLMAAVATRDAAGALCEIDAAAGEGVDLGQLAEQLLGYL-RDAMV 333 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 142/360 (39%), Positives = 213/360 (59%), Gaps = 4/360 (1%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 VL RK+RPQ F +++GQ HV L N + ++ HAYLF+G RG GKTS A++ AK LNC Sbjct: 7 VLYRKYRPQGFDNLIGQNHVKNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNC 66 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 ++ I PCG C C Q D+IE+DAAS V+D RDL + V YAPA G+ KVY+ Sbjct: 67 QSPIDYNPCGECVCC----QDSNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKKKVYI 122 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS +FNALLKTLEEPP H+ F+LATT+P K+P TILSRC ++ + + + I Sbjct: 123 IDEVHMLSTAAFNALLKTLEEPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIV 182 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 H+++ I+ E + E +AL+L+++ A G +RDALSL DQAI+ +G+V+ Q + + G + Sbjct: 183 HRMKTIVEAESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGKVTLQDIIEITGAV 242 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D + +L++ + ++N E + N G E L EM+ L I + + Sbjct: 243 DTRKIGTLIQYINQSNIEGALEHFNTCFESGQEPHFFLEEMMIYLRDILVNRKLGEKATL 302 Query: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMP 364 + + E+A ++ P I Y L + + D ++ +EMT++ + + P Sbjct: 303 KKGHNDPQFYEIANSVGPDKIYDYMDLLNKAHSNMKFHNDVQLLMEMTIIEMINNQNQSP 362 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 129/302 (42%), Positives = 199/302 (65%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ F +VVGQ H+ + N L R+ HAYLFSG RG GKTS+A+++AK Sbjct: 1 MAYQALYRVYRPQRFDEVVGQAHITRTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C CR I +G D+ EIDAAS V++ R++ D V+Y P+ + Sbjct: 61 AINCEQAPVNEPCNECPTCRAITEGSSPDVFEIDAASNNGVDEIREIRDKVKYPPSEAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TI+SRC +F +K +V Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPAHAIFILATTEPHKIPATIISRCQRFDVKRHEV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ ++++IL+++ I + AL+L+ARAA+G +RDALSL DQA+A +G ++ AV + Sbjct: 181 DQLMERMQYILSDQTIGYTETALRLIARAADGGMRDALSLLDQAVAFSNGDLTDDAVLEV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G ++D+ L++ A+ ++++ + + G + + + +++ +++ SP Sbjct: 241 TGAVEDEALLAVANALQAHQVDQLLQTLEKMQRAGKDLKRFVEDLVFFYRDTLLLKTSPT 300 Query: 301 AL 302 A+ Sbjct: 301 AV 302 >UniRef50_A6QBX8 DNA polymerase III, gamma/tau subunits n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBX8_SULNB Length = 666 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 158/430 (36%), Positives = 238/430 (55%), Gaps = 46/430 (10%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LARK+RP TF D++GQ+ V L+ L R+ HAYLFSG RG GKTS AR+ AK L CE Sbjct: 5 LARKYRPATFDDLIGQDSVSQTLSLALDGNRLSHAYLFSGLRGSGKTSTARIFAKALLCE 64 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 G T+ PCG C +C + R +D+IE+DAAS ++D +DL+++ +Y P+ R+K+++I Sbjct: 65 QGTTSHPCGTCTHCVMAAENRHMDIIEMDAASNRGIDDIKDLIEHTKYKPSSARYKIFII 124 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHML+ +FNALLKTLEEPP+ VKF+LATTDP KLP TILSR F K + + Sbjct: 125 DEVHMLTTQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQNLVLS 184 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 LEHI+N E I +E AL+++AR+ GSLRD+L+L DQAI V V+ MLG ++ Sbjct: 185 HLEHIMNLEKIEYEKEALEIIARSGAGSLRDSLTLLDQAIVYSKNFVDVGTVTGMLGIIE 244 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLV---------------------E 284 +L+ +V+ + +++ I A+ ++EA ++ Sbjct: 245 PSLLEALLGNIVKKDTTKILEFIKLAS----DYEAEMILDELTLYLKELLLTGSGKLNPM 300 Query: 285 MLGLLHRIAMVQLSPAALGNDMA-AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAP 343 ++ R+ S ALG+D + L + ++ + DI + L KEL Sbjct: 301 IIERFFRVIAESKSLLALGSDGEFVLSLALFKMMEALEIKDIDTMIRGL---EKELK--- 354 Query: 344 DRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA----PQQ 399 GVE++ + P+P+ P + + ++TP+Q +SA ++ Sbjct: 355 ----GVEVSEIMV-----STPVPDLSTPSEVIT-ITEEDILTPSQTESVQRSAFSAEKEE 404 Query: 400 APTVPLPETT 409 T PLP+T+ Sbjct: 405 ETTEPLPKTS 414 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 144/361 (39%), Positives = 220/361 (60%), Gaps = 10/361 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + L RK+RPQ F D+VGQ HV+ L N L GRI HAYLF+G RG GKTS A++ A Sbjct: 1 MGFLSLYRKYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+NCR+I++G+ +D+IEIDAAS +++ R+L + V++ P G + Sbjct: 61 ALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNEGEY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPPE V F+LATT+P ++ TILSRC +F L V Sbjct: 121 KVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQRFDFSLLPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ +L +I +E + E AL +LAR+A G LRDA+SL DQAI+ ++ V M Sbjct: 181 REIQERLRYICEKEEVEFEEEALNILARSANGGLRDAISLLDQAISYTGNNLNPIDVQGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + ++ ++ N + L+N +RG L+ +++ ++ +V+ Sbjct: 241 LGKVSREVLSQFIKYVLNGNSVEALKLVNRIISRGNNVGRLIGDLIEYGRQLLLVK---- 296 Query: 301 ALGNDMAAIEL------RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 G D IE ++ AR I + + L + +++ Y+ + R+ +E+ ++ Sbjct: 297 ECGPDSRIIEYPDEVLEKISGEARAIKTSRLIEIIDQLTVMERDIKYSDEPRLILEVGII 356 Query: 355 R 355 + Sbjct: 357 K 357 >UniRef50_Q0EXX3 DNA polymerase III subunits gamma and tau n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX3_9PROT Length = 561 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 155/356 (43%), Positives = 222/356 (62%), Gaps = 2/356 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLAR+WRPQ F+D+VGQ+ V+ L N L+ G + HAYL G RGVGKT+IARL+A Sbjct: 1 MSYLVLARRWRPQQFSDLVGQDVVVRTLKNALASGNLAHAYLLCGIRGVGKTTIARLMAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 NCE PCG C CR I G +D+ E+DAAS T V+D R++LD V+Y P+ + Sbjct: 61 AANCEQPEDGEPCGRCKACRGIADGSNLDVQEMDAASHTGVDDVREILDGVRYPPSSLKT 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 +VY+IDE HMLS+ +FNALLKTLEEPP HV F+LATT+ +KLPVT+ SRC +F L+ L + Sbjct: 121 RVYIIDEAHMLSKSAFNALLKTLEEPPAHVLFILATTESEKLPVTVRSRCQRFDLRRLGL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I L H+ +E I+ + A +ARAA+GS+RDALSL+++ +A +++ V A Sbjct: 181 SEIAAYLTHVFEQESISADSDAAAAIARAADGSVRDALSLSERVLAYSGKKLALADVDAA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + SL A+ + V+ + AA G LL E+ L H+++ + + + Sbjct: 241 LGQIGVARIRSLSHAIFAGDALAVVEQMRAAAGTGHGARTLLQELARLWHQLSCLLVDES 300 Query: 301 ALGNDMAAIELRMRELAR-TIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 LG ++ + + E R + + L YQ L+ G ++L D RMG EM L+R Sbjct: 301 LLGEEVDLEQRQWLEQYRDKLSGPALDLRYQVLISGMRDLSLV-DERMGAEMILMR 355 >UniRef50_B6AMH2 DNA polymerase III subunit gamma/tau n=2 Tax=Leptospirillum sp. Group II RepID=B6AMH2_9BACT Length = 540 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 170/409 (41%), Positives = 234/409 (57%), Gaps = 16/409 (3%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LARKWRPQ F+D+VGQE V+ AL LS G++ A LFSG RGVGKT++AR+LAK +NCE Sbjct: 7 LARKWRPQLFSDLVGQEFVVRALTGTLSSGKLPQALLFSGDRGVGKTTVARILAKAINCE 66 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 G T PC CD+C EI +G D++EID AS T VED R L + ++Y P R R +VY+I Sbjct: 67 KGPTVNPCQECDSCLEITRGTSPDVLEIDGASHTGVEDIRSLREGIRYLPFRSRSRVYII 126 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHMLS+ +FNALLKTLEEPP HV F+ ATT+ K+P TILSRC F ++L V +I Sbjct: 127 DEVHMLSQAAFNALLKTLEEPPPHVVFIFATTEDHKIPDTILSRCQHFRFRSLGVPEITA 186 Query: 186 QLEHILNEEHIAHEPRA-LQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 +LE+I+ +E ++ PRA L L+ARA+ GSLRDALSL DQ GD S + + LG Sbjct: 187 KLENIVRQELLSF-PRAILNLIARASGGSLRDALSLLDQIRFLGDTPRSVEETALFLGMA 245 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 L+++++E N + + + A GI+ A L + + + M L L + Sbjct: 246 GGLPEKKLLDSLLEGNLKNALENGDRILAMGIDPRATLRSLASKVRDLLMSSLLECPLTD 305 Query: 305 DMAAIELRMRELARTIPPTDIQL--YYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 A + E+ T P L LL G + +P + + L R + Sbjct: 306 PRFAWD--ESEVPETPLPGAFFLEQMLSLLLEGEMGIRKSPQPSITFLLCLCRIVHIQNI 363 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 +PLPE ++ T + + PP+P A + P+VP P T Q Sbjct: 364 LPLPE------ILDRLSKTGL---SSSPPEPTRAALR-PSVPNPVATQQ 402 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 138/358 (38%), Positives = 219/358 (61%), Gaps = 3/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++LA+ Sbjct: 1 MGYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PC C CR I +G +++IEIDAAS V++ R++ + V Y P G++ Sbjct: 61 AVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTTGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 + I +L+ ++++E E +A++ +A+AA+GS+RDALSL DQ IA G+ ++ + V Sbjct: 181 DTIAARLQELMDKEGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLGEKLTYEKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS- 298 LG +D ++ +++ + + ++E +G E + + + L + ++ S Sbjct: 241 NLGAVDTQVFSRMLRQILQQDTAGTIKTLDEIIIQGRELGQFVTDFIWYLRNLLLISTSE 300 Query: 299 -PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 P + A RM+E + + + Y + ++ YA +R+ VE+ L++ Sbjct: 301 HPEEAVDASAENLERMKEESSMVDAETLMRYIRIFSELSNQIKYASQKRVLVEIALIK 358 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 139/359 (38%), Positives = 213/359 (59%), Gaps = 8/359 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS---- 298 +D+ SL++ M + + +++ + GI+ L + +L + + + Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L +D+ I+ R++ ++ + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNL----QKEVRYAISPLTLLEVTILRLI 356 >UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 Tax=Roseiflexus RepID=A7NLI5_ROSCS Length = 644 Score = 270 bits (691), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 136/260 (52%), Positives = 182/260 (70%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L R++R QTF +++GQEHV+ L N ++ GR+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MTVQALYRRYRSQTFDELIGQEHVVRTLRNAIAEGRVAHAYLFTGPRGVGKTTVARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PCGVC++CR I +GR VD+IE+DAAS T VED R++++ VQ+ PA R Sbjct: 61 AVNCTAPPAERPCGVCESCRSIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPAVART 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+ K+P TILSRC +F V Sbjct: 121 KVYIIDEVHMLSTAAFNALLKTLEEPPPHALFILATTEVHKVPATILSRCQRFVFNRHTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I +E + EP A + +ARAA GS+RDALS+ DQ +A G G VS + V + Sbjct: 181 ASIAAHLRMIATQEGVTLEPGAAEAIARAATGSMRDALSVLDQLMAYGGGTVSLEQVRNL 240 Query: 241 LGTLDDDQALSLVEAMVEAN 260 LG + + +LV+A++ A+ Sbjct: 241 LGASEMQEVTTLVDALIAAD 260 >UniRef50_A9AUW8 DNA polymerase III, subunits gamma and tau n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AUW8_HERA2 Length = 575 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/313 (44%), Positives = 198/313 (63%), Gaps = 5/313 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS Q L RKWR QTF D+VGQ H++ AL N ++ RI HAYLF+G RGVGKTS AR+L+K Sbjct: 1 MSSQALYRKWRSQTFDDLVGQSHIVQALRNAIAANRIGHAYLFTGPRGVGKTSAARILSK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NCE + PCG C CR I +GR VD+IE+DAAS T V+D R++++ VQ+ P + R Sbjct: 61 AVNCEQSDPRLRPCGECSTCRAIAEGRAVDVIEMDAASHTSVDDAREIIEKVQFRPTQFR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 KVY+IDEVHMLS +FNALLKTLEEPP+H F+LATT+ K+P TILSRC +F Sbjct: 121 KKVYVIDEVHMLSTAAFNALLKTLEEPPDHAMFILATTEFHKVPATILSRCQRFVFNRHT 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + LE + EE + EP + +ARAA GS+RDA+S+ DQ + G+ Q+ V + Sbjct: 181 IANTIAHLEWVAGEEGVFLEPGVAEAVARAATGSMRDAMSILDQLMGYGEPQIPLTRVQS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG + +LV A + +++IN A +G + +++ L + +++ Sbjct: 241 LLGATASREVETLVAAFAAEDVAAALSVINTIADQGADLRQFTRDVVSYLRGLMLLKSGG 300 Query: 300 AA----LGNDMAA 308 AA +G+D+ A Sbjct: 301 AADLLDVGHDVLA 313 >UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 Tax=Desulfovibrionales RepID=A1V9U7_DESVV Length = 622 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 142/342 (41%), Positives = 204/342 (59%), Gaps = 3/342 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L ++RPQTFA+V GQE V L+ R+ AYLFSGTRGVGKT+IAR+ AK Sbjct: 1 MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC T T PC C+ CR++ QG VD++EID AS ++D + L + + YAP GR+ Sbjct: 61 ALNCATAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L +L E + ++P A++L+AR A GS+RD++SL Q +A G+ +++ + Sbjct: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-QLSP 299 LG + L L+EA+ + V ++ E RG++ L E++ + M+ Q Sbjct: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE 300 Query: 300 AALGN-DMAAIELRMR-ELARTIPPTDIQLYYQTLLIGRKEL 339 AAL + D+ E R A+ P I +Q L G++ + Sbjct: 301 AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRV 342 >UniRef50_B0T1T4 DNA polymerase III, subunits gamma and tau n=10 Tax=Alphaproteobacteria RepID=B0T1T4_CAUSK Length = 632 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 160/377 (42%), Positives = 225/377 (59%), Gaps = 17/377 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y VLARK+RP+TF D++GQE ++ LAN S GRI HA++ +G RGVGKT+ ARLLA+ Sbjct: 82 AYTVLARKYRPRTFEDLIGQEAMVRTLANAFSSGRIAHAFMLTGVRGVGKTTTARLLARA 141 Query: 62 LNCETGITATPCGVCD------NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LN ET P D +C+ I +GR +D++E+DAASRTKV++ R+LLD V+YAP Sbjct: 142 LNYETDTVHQPS--VDLTIDGRHCKAIIEGRHMDVLELDAASRTKVDEMRELLDGVRYAP 199 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 R+KVY+IDEVHMLS +FNALLKTLEEPP H KF+ ATT+ +K+PVTILSR +F L Sbjct: 200 VEARYKVYIIDEVHMLSTAAFNALLKTLEEPPPHAKFIFATTEIRKVPVTILSRTQRFDL 259 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD--GQVS 233 + ++ + + I +E E L L+ARAAEGS+RD LSL DQAI G+ V+ Sbjct: 260 RRVEPDVLVKHFARIAAKEGAKVEEDGLALIARAAEGSVRDGLSLLDQAIVQGERGSTVT 319 Query: 234 TQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIA 293 V MLG D Q ++L E ++ +A G + +++++L H + Sbjct: 320 AAVVRDMLGLADRGQTIALFENVMSGKPGDSLAGFRALWGFGADPAVVMLDLLDHCHGAS 379 Query: 294 MVQ-LSPAALG--NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVE 350 + + L P AL + AA R+ + + +Q LL +E+ APD E Sbjct: 380 VAKALGPDALTLPKEQAA---RLTAIGAQTSAGTLSRLWQMLLKAHEEVRRAPDAMAAAE 436 Query: 351 MTLLRALAFHPRMPLPE 367 M L+R L + +P PE Sbjct: 437 MALIR-LCYAADLPGPE 452 >UniRef50_C6XQ39 DNA polymerase III, subunits gamma and tau n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQ39_HIRBI Length = 619 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 157/362 (43%), Positives = 216/362 (59%), Gaps = 18/362 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +YQVLARK+RP TF D+VGQE ++ L N GRI HA++ +G RGVGKT+ ARLLA+ Sbjct: 36 AYQVLARKYRPTTFDDMVGQEAMVRTLTNAFKTGRIAHAFMLTGVRGVGKTTTARLLARA 95 Query: 62 LNC------ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LN E + +P G +C+ I + R D++E+DAASRT V D R+LLD V+Y+P Sbjct: 96 LNYSRDGVEEPSVQLSPVG--RHCQAIMESRHPDVLELDAASRTGVADMRELLDGVRYSP 153 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 R+KVY+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F+L Sbjct: 154 VNARYKVYIIDEVHMLSTAAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRCQRFNL 213 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG-QVST 234 L + + L I +E L L++RAAEGS RDALS+ DQAI G +VS Sbjct: 214 ARLTTDALAAHLGRICEKEGAKVSEEGLALISRAAEGSARDALSVLDQAIVQSTGDEVSV 273 Query: 235 QAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAM 294 AV MLG D + L++A + + + N G E + L+ ++L + IA Sbjct: 274 DAVRDMLGLADRARVFDLLDAAIAGEHKVALEETNAQLQEGAEAQILMKDLLDAMAEIAR 333 Query: 295 VQLSPAALGNDM---AAIEL--RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGV 349 Q A+G +E R ++LA +I Y++ LL G ++ APD + Sbjct: 334 AQ----AMGESYVFAGPVEWTQRTKKLASSISNAQSARYWKLLLQGYEDCARAPDPNVAA 389 Query: 350 EM 351 EM Sbjct: 390 EM 391 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/356 (39%), Positives = 208/356 (58%), Gaps = 1/356 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A+L AK Sbjct: 1 MSYQALYRVFRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I+ E + + AL ++A AA+G +RDALSL DQA++ +++ + Sbjct: 181 QAIVGRMKKIVEAEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L + E N + +NE +G + L+ +M+ + + Q +P Sbjct: 241 TGAVSQHYIGKLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPD 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 G + ++ + L+R IP +D+ L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMKWTNHPRIFFEVAVVK 356 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 146/363 (40%), Positives = 224/363 (61%), Gaps = 13/363 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP TF DV GQ+H++T L N + RI HAYLF GTRG GKT++A++LAK Sbjct: 1 MSYMALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC C C+ I+ +++IEIDAAS V++ R++++ V+Y+P G + Sbjct: 61 TVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 ++I +L I +E I E +AL+ +ARAA+GS RDALSL DQ IA GQ ++ V Sbjct: 181 DEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LGT+D + L+ + + + +A++ E +G E ++ L + + + S Sbjct: 241 ALGTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTS- 299 Query: 300 AALGNDMAAI-EL---RMRELARTIPPTDIQLYYQTLLIGRK---ELPYAPDRRMGVEMT 352 DM I E+ +++ L + D +L + + I + ++ YA +R+ +E+ Sbjct: 300 ----EDMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQKRVMIEVA 355 Query: 353 LLR 355 L++ Sbjct: 356 LVK 358 >UniRef50_Q022F8 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022F8_SOLUE Length = 568 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 222/367 (60%), Gaps = 2/367 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQV+ARK+RPQ+FADV+ QEHV T L N ++ RI H Y+FSG RG GKT+IAR+LA+ L Sbjct: 2 YQVIARKYRPQSFADVICQEHVKTTLENAIAQHRIAHGYIFSGQRGTGKTTIARILARCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G TATPCGVC +C+EI +G VD+IEIDAAS + + R+L +NV+Y PAR R+K+ Sbjct: 62 NCVQGPTATPCGVCASCKEISEGGTVDVIEIDAASNRGINEMRELRENVRYQPARDRYKI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE H ++ +FNALLKT+EEPPE F+L TT+ K+P TI SRC F +++D ++ Sbjct: 122 FIIDEAHQITNEAFNALLKTIEEPPEWAVFVLCTTESHKIPATIASRCQHFSFRSVDFQE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + ++ I +E I + AL +LA A EGS+RD+LS DQAIA +++ V A+LG Sbjct: 182 LVDRMSWICGQEGIEADAEALAVLAAAGEGSVRDSLSALDQAIACCGAKITAPEVRALLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA- 301 + + EA+ ++ +++E G + E+ + + +++ A Sbjct: 242 AFSLESLEKVTEALAAGESRMMLEVVDELERNGQNLQHFSRELSRYFRNLLVTRIAGADT 301 Query: 302 -LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L AA ++ +A D+ Y Q L ++L ++ R +E+ L+R + Sbjct: 302 RLVAASAAQREKLGHIAGQFSEEDLSRYLQLSLDIFRDLQFSLQPRFHLEIGLVRLVQAG 361 Query: 361 PRMPLPE 367 +P+ E Sbjct: 362 RLLPIEE 368 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/360 (39%), Positives = 210/360 (58%), Gaps = 8/360 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRPQ+F ++VGQEHV L N ++ RI HAYLF G RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C NCR I G D++EIDAAS V++ R+L + V+YAP G + Sbjct: 61 ALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP +V F+LATT+ K+P TILSRC +F + L V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +LE I IA L +AR AEG +RDAL + DQ ++ ++ + V+A+ Sbjct: 181 NEIVDRLERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D+ + + + E V+ +N+ RG E L ++LG +++ P Sbjct: 241 LGAVADEILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPG 300 Query: 301 A-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 A + +D+AA +++E +D+Q L ++ + R+ +E+ +R Sbjct: 301 AADLVDMPDDIAA---KVKETGHVYSVSDLQACIALLSQAENDMKWTTHPRILLEVAFVR 357 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 139/359 (38%), Positives = 213/359 (59%), Gaps = 8/359 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS---- 298 +D+ SL++ M + + +++ + GI+ L + +L + + + Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L +D+ I+ R++ ++ + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNL----QKEVRYAISPLTLLEVTILRLI 356 >UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 Tax=Chlorobiaceae RepID=B4S8V3_PROA2 Length = 617 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/433 (35%), Positives = 235/433 (54%), Gaps = 33/433 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV+ARK+RP FAD+ QEH+ + N L L R+ H Y+FSG RGVGKT+ AR+ AK Sbjct: 1 MSYQVIARKYRPSKFADITAQEHITHTIQNALRLDRVGHGYIFSGLRGVGKTTAARVFAK 60 Query: 61 GLNCETGI--------TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 +NC+ I PCG C++C + + G +++ E DAAS V+D R L +NV+ Sbjct: 61 AVNCQKMIDDPVYRQEVTEPCGECESCLDFDAGTSLNISEFDAASNNSVDDIRQLRENVR 120 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P +GR++VY+IDEVHMLS +FNA LKTLEEPP H F+ ATT+ K+P TI SRC + Sbjct: 121 YGPQKGRYRVYIIDEVHMLSTAAFNAFLKTLEEPPSHAIFIFATTELHKIPATISSRCQR 180 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ- 231 F+ K + + +I+ QL+ I E + AL L+AR A+GS+RDA S+ DQ IA G Sbjct: 181 FNFKRIPIGEIQSQLQMICRAETLQISDDALLLIARKAQGSMRDAQSILDQVIAFSVGND 240 Query: 232 ----VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEML- 286 ++ Q V+ +L +DDDQ + +A+ E + +++ + G + + L +++ Sbjct: 241 AEKVIAYQGVAELLNYIDDDQFFDVSDAVAENDPVKMLQVARFVIDNGYDEQDFLEKLIE 300 Query: 287 GLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR 346 + + + L L +++ R ++ A + + L+ EL + + + Sbjct: 301 HFRNFLVLYNLRSTRLIERTESVKERYQQSAGGLSAPLVMQLIDLLMKESGELKFQFEYQ 360 Query: 347 MGVEMTLLR-------------ALAFHP--RMPLPEPEVPRQSFAPVAPTAVMTPTQVP- 390 E+TLLR ++A P + PEP++ + P P P P Sbjct: 361 FRFELTLLRLIELVHNDGGVAASVAGGPPVKKKAPEPDLKQPDRHP-GPAGRSAPGARPA 419 Query: 391 --PQPQSAPQQAP 401 P P S P+Q P Sbjct: 420 ELPSPASTPEQQP 432 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 124/274 (45%), Positives = 183/274 (66%), Gaps = 1/274 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RK+RPQ F+D+VGQEH+ L N + L RI HAYLF+G+RG GKT+ A++ A+ + Sbjct: 2 YLTLYRKYRPQKFSDMVGQEHITKTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFARAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ + PC C C+EI +G FV++IE+DAAS V+D R + + V Y PA G +KV Sbjct: 62 NCKNSVDGKPCEKCVVCKEIAEGAFVNIIELDAASHNGVDDIRQINEEVLYTPAVGVYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNA+LKTLEEPP +V F+LATTDPQK+P T+LSRC +F + + Sbjct: 122 YIIDEVHMLSPAAFNAMLKTLEEPPPYVVFILATTDPQKIPATVLSRCQRFDFRRISTSD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSAML 241 I L + E+I E A++L+AR A+G +RDALS+ +Q I+ D +++ V ++ Sbjct: 182 ICDCLLDYMQRENIEIEKEAVELIARLADGGMRDALSILEQCISFYIDEKITHSKVLKLV 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARG 275 G +D+ ++ A++E + + +A+ NE +G Sbjct: 242 GAVDNALLFEMMNAVIEMDAAKAIAVCNEINQQG 275 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 186/520 (35%), Positives = 266/520 (51%), Gaps = 34/520 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R +RPQTF DVVGQEHV T L N L R+ HAYLF+G RG GKTS A+++AK Sbjct: 1 MAYTALYRVYRPQTFQDVVGQEHVTTTLRNALRENRLSHAYLFNGPRGTGKTSAAKIMAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC CD CR I G D++EIDAAS VE+ RD+ D V++AP+ R+ Sbjct: 61 AVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEIDAASNRGVEEIRDIRDKVKFAPSDVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPSHVIFILATTEPHKLPATIISRCQRFDFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+ I + + E +ALQL+A+ AEG RDALSL DQAI+ +V + + Sbjct: 181 RVMVDLLQRICQSQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSKDEVRASDIMQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 GT+ L + E + +VM ++ +G + E L + L + +++ +P Sbjct: 241 TGTVAQSYFSVLARHIAENDIAQVMEQFDKVMVQGKDPEQFLHDFLYYYRDMLLLKTAPQ 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + I+ + E+A+ + +T +L ++ R+ VE+TL++ Sbjct: 301 LEEIVERTMIDDQFAEVAKLYSFPVLYAAIETCNQALSQLKWSTYARVLVELTLVK---- 356 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 M P T M + V + +A V L E QV+ + Sbjct: 357 ---MCQPNANA----------TESMGASPVNSEELTAMSNRIRV-LEERLVQVMQGQVST 402 Query: 420 QRVQGATKAKKSEP---AAAT--------RARPVNNAALERLASVTDRVQARPVPSALEK 468 Q A + +KSEP AAA+ R R V A E L R Q + + L+K Sbjct: 403 PGQQKAEETRKSEPRRIAAASGGSRTPMNRVREVAKAMDENLTRQV-RGQWSQILTELKK 461 Query: 469 APAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE 508 + +A+ PV E V A+ +KT E Sbjct: 462 IKIQYQAWLVNG-QPVAAGNEAVVV--TFNSAIHCDKTME 498 >UniRef50_B9KFI3 DNA polymerase III, gamma and tau subunits n=3 Tax=Campylobacter RepID=B9KFI3_CAMLR Length = 510 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/286 (46%), Positives = 183/286 (63%), Gaps = 2/286 (0%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LA K+RP+TF ++VGQ V +L L R+ HAYLFSG RG GKTS AR+ ++ L Sbjct: 3 QALAIKYRPKTFDELVGQSTVSISLKYALENNRLAHAYLFSGLRGSGKTSSARIFSRALV 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE G A PCG C C G +D+IE+DAAS +ED ++L++ V+YAP+ RFK++ Sbjct: 63 CENGPNANPCGKCSQCVSSLNGSNIDIIEMDAASHRSLEDIQELIEQVKYAPSMARFKIF 122 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+ + NALLKTLEEPP +VKF+LATTDP KLP T+LSR F K + ++I Sbjct: 123 IIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLKLPATVLSRTQHFRFKQISQQEI 182 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 LE IL +E I++E AL+L+AR+ GSLRD L+L DQAI + TQ ++AMLG Sbjct: 183 LKHLEWILEQEKISYEKEALKLIARSGNGSLRDTLTLLDQAIVYCQNHIQTQKITAMLGF 242 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 LD + +A++ ++V + E E ++ EM+ L Sbjct: 243 LDPAKIEEFYQAILANEKDKVFEFLKE--FEDYEASNVIDEMIFFL 286 >UniRef50_B9L692 DNA polymerase III, subunits gamma and tau n=1 Tax=Nautilia profundicola AmH RepID=B9L692_NAUPA Length = 493 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 124/273 (45%), Positives = 185/273 (67%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 VLA K+RP+ F +++GQ+ ++ L N L RI HAYLFSG RG GKT+ AR+ AK L C Sbjct: 2 VLALKYRPKRFEEIIGQDAIVKTLVNSLDKNRIAHAYLFSGLRGAGKTTTARIFAKALQC 61 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 + G T+ PC C+NC + R +D+IE+DAAS K+ED R+L+++ +Y P+ G++K+++ Sbjct: 62 DHGPTSNPCEECENCIMANESRHIDIIEMDAASNRKIEDIRELIEHTKYKPSVGKYKIFI 121 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHML+ +FNALLKTLEEPPE+VKF++ATTDP KLP TILSR F + I Sbjct: 122 IDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIKNGIIE 181 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 + L IL E++ + AL+L+ +AA+GS+RD+L+L DQAIA G++ +V MLG + Sbjct: 182 NYLIKILAIENVEFDEEALRLIIKAAKGSVRDSLTLLDQAIAFSKGKIDLDSVVDMLGVI 241 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIE 277 + + + +A+ ++ +R+ ++ E IE Sbjct: 242 NPEIINEIFDAVKNSDKKRIKEIVGEIKDYDIE 274 >UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=Lactobacillus RepID=Q1G919_LACDA Length = 607 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/288 (44%), Positives = 184/288 (63%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L RKWRP+TF DVVGQE + L N L G++ HA+LF+G RG GKTS A++ AK Sbjct: 1 MAYQALYRKWRPRTFDDVVGQEAITDTLKNSLIRGKVSHAFLFAGPRGTGKTSCAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C NC +QG D+IE+DAAS V++ RDLLD V YAP G++ Sbjct: 61 ALNCLNLQEGEPCNECSNCLAADQGAMPDIIEMDAASNNSVDEIRDLLDKVHYAPTEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP V F+LATT+ QK+P TI+SR +++ K Sbjct: 121 KVYIIDEVHMLSISAFNALLKTLEEPPASVVFILATTELQKVPATIISRTQRYNFKRFSN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + ++E+IL +E + +E +AL+++A+ A+G +RDALS+ DQ ++ V + + Sbjct: 181 EAMVQRMEYILGQEGVEYEDKALKVIAQVADGGMRDALSILDQLLSFEKSSVRYEDALEV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGL 288 G +Q L+ A++ + + + L A G + +L E++ L Sbjct: 241 TGFAAQEQVEKLLLALLNGDSQMALDLAKSAIQDGASAQNILNEIISL 288 >UniRef50_C6HVG4 DNA polymerase III, subunits gamma and tau n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVG4_9BACT Length = 576 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/409 (38%), Positives = 226/409 (55%), Gaps = 9/409 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + LAR +RP+TF+D++GQE V+ +L GLS G + AYLFSG RGVGKT++AR+LAK + Sbjct: 4 FASLARLYRPRTFSDLIGQEAVVRSLTRGLSSGVMTQAYLFSGERGVGKTTVARILAKAI 63 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC++G TATPC C +C EI +GR D+ E+D AS T V+D R L +++ YAP R ++ Sbjct: 64 NCQSGPTATPCLECSSCLEIAEGRSPDVTEMDGASHTGVDDVRTLRESLVYAPLTSRSRI 123 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 +IDEVHMLS +FNALLKTLEEPP HV F+LATT+ K+P T+LSRC F + L V Q Sbjct: 124 VIIDEVHMLSTSAFNALLKTLEEPPPHVVFILATTEAHKIPDTVLSRCQHFRFRLLTVSQ 183 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I ++ H+ E+I+ P ++ARAAEGSLRDALSL DQ + +G ++ V+ +LG Sbjct: 184 ISDRILHVCRSENISLNPTVTGMVARAAEGSLRDALSLLDQLLRTGGESLTPADVADLLG 243 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D ++ A++ + + A G++ A + + I L +L Sbjct: 244 VTDHALEEKMLAAILLGDLSATLRTARTALDTGVDPRAQVRSLARRFRDILHSTLDGTSL 303 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLI---GRKELPYAPDRRMGVEMTLLRALAF 359 + + + PP +I Q L + G +L +P + E+ L R Sbjct: 304 DSPIYGWIPESVQALPLDPPPNIFFLEQALSVLVKGEDDLRRSPQPAITFELLLARLCHL 363 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET 408 +PLPE A + +P+ V +P PLP T Sbjct: 364 REVLPLPE------ILAKIGVAGATSPSSVRSLGPKTHNSSPPTPLPTT 406 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 126/298 (42%), Positives = 194/298 (65%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R++RP+ F DV+GQ+ V+T L N +S I HAYLF+GTRG GKTS A++ A+ Sbjct: 1 MSYKALYRRFRPKVFEDVIGQDQVITILKNQISSSNIAHAYLFTGTRGTGKTSTAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + A PC C+ C I +D+IEIDAAS V++ R++ +NV+Y P++G++ Sbjct: 61 AVNCLSAEDANPCNQCEVCEGILTENIMDVIEIDAASNNGVDNVREIRENVKYPPSKGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TILSRC +F K + + Sbjct: 121 KIYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRFDFKPVRI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE I + I E AL+L+A ++G+LRDALS+ +Q I+ + ++ V + Sbjct: 181 NDIMKRLESICEDIGIKTEEEALRLIALNSDGALRDALSILEQCISYTEDTLTYTNVVNI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 LG ++ + LV+ + + V+ LIN+ G + L+ +++ I + +++ Sbjct: 241 LGMVNYEFIFDLVDKIAAKDTSSVLTLINDILMEGKDAGILMKDIISHFRSILLAKMN 298 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 135/311 (43%), Positives = 196/311 (63%), Gaps = 5/311 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ FAD+VGQEH+ L+ ++ G+I HAYLF+G RG GKTS A++LA+ Sbjct: 1 MAYVALYRRWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPCG CD+CR I G +D+ EIDAAS +++ RDL ++V++AP G + Sbjct: 61 ALNCAEGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTEGLY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML+ +FNALLKTLEEPPE V F+LATT+P K+P TI SRC ++ + V Sbjct: 121 KIYIIDEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRYDFHRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +L ++ E I E AL ++A A+G +RDALS+ DQ A +G ++ + V Sbjct: 181 TEICDRLIYVCKESGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEGTLTAERVQEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + E + + ++ +++ G E +LVE L R M+ A Sbjct: 241 LGLVGRAWIRQMAEQIAARDAAALITQLSQLLQNGRELRQVLVE-LAQYFRSLMI----A 295 Query: 301 ALGNDMAAIEL 311 +G ++A EL Sbjct: 296 GVGGTISAAEL 306 >UniRef50_A3VPV6 DNA polymerase III subunits gamma and tau n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPV6_9PROT Length = 607 Score = 268 bits (685), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 222/376 (59%), Gaps = 13/376 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 Y+VLARK+RPQ+F D++G E ++ L N + RI HA++ +G RGVGKT+ AR++A+ Sbjct: 13 GYRVLARKYRPQSFDDLLGHEAMVRTLRNAFAADRIAHAFILTGVRGVGKTTTARIIARA 72 Query: 62 LNCETGITATPCGVCD------NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LN ET P D +CR I + R D+ E+DAASRT V D R+L++ V+YAP Sbjct: 73 LNYETETIDRPT--VDMPVEGRHCRAIAESRHPDVYEMDAASRTGVGDIRELIEGVRYAP 130 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GR+KVY+IDEVHMLS ++FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L Sbjct: 131 IEGRYKVYIIDEVHMLSTNAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDL 190 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VST 234 + D+ + L I +E A AL ++A+AAEGS+RDALSL DQA+ G+ + Sbjct: 191 RRFDITSLSAHLAGIAEKEEAAISKEALDMIAQAAEGSVRDALSLLDQALVQKAGEAIGA 250 Query: 235 QAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLH---R 291 + MLG +D Q L+ A + + + + L E G + ++ ++L L H R Sbjct: 251 ADIRDMLGLVDRTQTWDLLGAAMAGDAKTALRLFREQYDGGADAGQVMRDLLSLTHLLTR 310 Query: 292 IAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEM 351 + AA G A R + +A +P + + L+ +E+ APD E+ Sbjct: 311 TLVAGDEAAAHGQAGEADTERAQAMAHGVPLPALTRSWSLLMKALEEVQNAPDAAAAAEI 370 Query: 352 TLLRALAFHPRMPLPE 367 L+R +A+ P PE Sbjct: 371 GLIR-VAYAAGQPTPE 385 >UniRef50_B2ICM3 DNA polymerase III, subunits gamma and tau n=3 Tax=Rhizobiales RepID=B2ICM3_BEII9 Length = 651 Score = 268 bits (685), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 170/444 (38%), Positives = 252/444 (56%), Gaps = 29/444 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y VLARK+RP F D++GQE ++ L+N L RIH AYL +G RGVGKT+ AR+LA+ Sbjct: 29 YLVLARKYRPSRFEDLIGQEAMVKTLSNAFDLDRIHQAYLLTGVRGVGKTTTARILARAF 88 Query: 63 N----CETGITAT--PCGVCD----NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 N E G A P D +C+ I + R VD+IE+DAAS T ++D R+++++ + Sbjct: 89 NYEVPAENGQPAIEKPTVHMDRFGVHCQAIIESRHVDIIEMDAASHTGIDDIREIIESAR 148 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P R KVY+IDEVHMLS+ +FN LLKTLEEPPEHVKF+ ATT+ K+P+T+ SRC + Sbjct: 149 YRPVSARVKVYIIDEVHMLSKQAFNGLLKTLEEPPEHVKFIFATTEIDKVPITVRSRCQR 208 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ- 231 F L+ ++ + L + +E++ E AL L+ARAAEGS+RDALSL DQAIA G GQ Sbjct: 209 FDLRRIEPAVLIDYLASVCAKENVLIEREALGLIARAAEGSVRDALSLLDQAIAHGTGQA 268 Query: 232 --------VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLV 283 +S + AMLG D + + L EA++ + + +A + G + +LV Sbjct: 269 DPHSSAQPISATDLQAMLGLADRARIIDLFEAVMRGDMAKALADLKNLHDCGADPAQVLV 328 Query: 284 EMLGLLHRIAMVQLSPAALGNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYA 342 E+ +H + ++LSP EL R +A T+ + +Q L G +E+ + Sbjct: 329 ELAEFVHFVTRLKLSPHTFDAAATPEELSRGGAMAGTLSVMVLTRAWQILTKGLQEVKDS 388 Query: 343 PDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAP------TAVMTPTQVPPQPQSA 396 P +M L+R LA+ +P P+ + + + P +P T ++ ++V P SA Sbjct: 389 PRPLACADMVLVR-LAYAADLPTPDVVLRQLAKTPPSPHGRDGSTDAVSGSRVQPSLPSA 447 Query: 397 PQQAPTVPLPETTSQVLAARQQLQ 420 P++ P TS L A+ Q Sbjct: 448 --SGPSLGSPLVTSSRLGAQAATQ 469 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 268 bits (684), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 145/362 (40%), Positives = 212/362 (58%), Gaps = 14/362 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RKWRP F DVV QEHV+ + N + GRI HAYLF GTRG GKT++A++ A+ Sbjct: 1 MSYTALYRKWRPLVFEDVVEQEHVVRTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I +D++EIDAAS V++ R++ D V YAP++ R+ Sbjct: 61 AINCINPKDGNPCNECEVCRGILDESILDVVEIDAASNNSVDNVREIRDEVVYAPSQARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP HV F+LATTDP KLP TILSRC +F K + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPGHVVFILATTDPHKLPATILSRCQRFDFKKITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +++ I I + L+AR A+G+LRDALS+ DQ IA G ++ Q V Sbjct: 181 AGIAERVKLIAQASGINIDDDGALLIARLADGALRDALSILDQCIAEGSTTITYQNVLDA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + DD +V+ + N E ++A + +A G + +++ + + +LS Sbjct: 241 IGIVSDDFISEIVDNIESKNVEGLVASVEMLSAEGRDILRFASDLVLYFRNLLICKLSK- 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIG--------RKELPYAPDRRMGVEMT 352 N +++ + L + I + + + + LIG +L YA ++R+ +E+ Sbjct: 300 ---NPENILDVGKQYLDKMIAQS--EAFTKERLIGIIKELSSFETQLKYALNQRVFLEVM 354 Query: 353 LL 354 L+ Sbjct: 355 LI 356 >UniRef50_C6RIQ9 DNA polymerase III subunit gamma/tau n=1 Tax=Campylobacter showae RM3277 RepID=C6RIQ9_9PROT Length = 831 Score = 268 bits (684), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 126/242 (52%), Positives = 170/242 (70%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LA ++RP+ F+++VGQE V T+L + L R+ HAYLFSG RG GKTS AR+ +K L Sbjct: 3 QALALRYRPRNFSELVGQEAVSTSLTHALDENRLTHAYLFSGLRGSGKTSSARIFSKALV 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C+ G T+ PC C NC +GR +D+IE+DAAS ++D + L++ +YAPA RFK++ Sbjct: 63 CDHGPTSQPCEQCANCIAANEGRHIDIIEMDAASHRGIDDIKGLIEQTKYAPAIARFKIF 122 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS +FNALLKTLEEPP +VKF+LATTDP KLP T+LSR F + + + Sbjct: 123 IIDEVHMLSTPAFNALLKTLEEPPPYVKFILATTDPLKLPATVLSRTQHFRFRQISRPDV 182 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L+ ILN E++ HE AL++LAR+ GSLRD L+L DQAI G+++ AV+ MLG Sbjct: 183 VAHLDFILNRENVPHEKEALEILARSGAGSLRDTLTLLDQAIIYAKGELTQSAVAQMLGL 242 Query: 244 LD 245 LD Sbjct: 243 LD 244 >UniRef50_C6QBE2 DNA polymerase III, subunits gamma and tau n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBE2_9RHIZ Length = 617 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 156/381 (40%), Positives = 226/381 (59%), Gaps = 22/381 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y VLARK+RP TF D++GQ ++T L N + GRI Y+ +G RGVGKT+ AR+LA+ L Sbjct: 24 YVVLARKYRPATFDDLIGQSAMVTTLRNAFASGRIAQGYMLTGVRGVGKTTTARILARAL 83 Query: 63 NCE-----TGITATPC----GVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQY 113 N E G P G+ +C++I +GR D++EIDAAS T V++ R+++++ QY Sbjct: 84 NYEAPDSGNGAIDKPTIDMPGLGVHCKDIMEGRHPDVLEIDAASNTGVDNIREIIESAQY 143 Query: 114 APARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF 173 P R KV++IDEVHMLS+ +FNALLKTLEEPP HV+F+ ATT+ +K+PVT+LSRC +F Sbjct: 144 TPLVARTKVFIIDEVHMLSKGAFNALLKTLEEPPAHVRFIFATTEIRKVPVTVLSRCQRF 203 Query: 174 HLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVS 233 L+ ++ + + I E + ALQL+ARAAEGS+RD LS+ DQAIA G+G V+ Sbjct: 204 DLRRVEQPVLAAHFKKISESEGAEADADALQLIARAAEGSVRDGLSILDQAIAMGEGHVT 263 Query: 234 TQAVSAMLGTLDDDQALSLVEAMVEA------NGERVMALINEAAARGIEWEALLVEMLG 287 +V MLG D + L EA+ NG A ++ A E L E + Sbjct: 264 AASVRDMLGLADRGRIFDLAEAIFRGDLPAALNG---FASLHRDGAEASEVIGDLAEAVH 320 Query: 288 LLHRIAMVQLSPAALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR 346 + R+ V PA G + A E R+ +LA + + +Q L+ G +E+ P+ Sbjct: 321 AIARVKAVGEEPA--GESLTAEEKKRLSDLASRLSMPYLSRAWQMLIKGLEEVGRTPNPD 378 Query: 347 MGVEMTLLRALAFHPRMPLPE 367 + EM L+R LA+ +P P+ Sbjct: 379 VAAEMVLIR-LAYTADLPTPD 398 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 140/359 (38%), Positives = 212/359 (59%), Gaps = 7/359 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQVFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC CD C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I++ E + + +L+++A AA+G +RDALSL DQAI+ Q++ + Sbjct: 181 KDIVGRMQKIVDAESLNVQEGSLEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L EA+ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQQFISQLAEAIFDQNIAVALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPD 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRK---ELPYAPDRRMGVEMTLLR 355 G + ++ L+ + P Q Y+T+ + K E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDENFVTLSDRVTP---QFLYETIEVLNKSHQEMKWTNHPRIFFEVAVVK 356 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 149/365 (40%), Positives = 209/365 (57%), Gaps = 23/365 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVL RKWRPQ F+DVVGQ V L N L GRI HAYLF+G+RG GKT+ A++LAK + Sbjct: 5 YQVLYRKWRPQVFSDVVGQPQVTVTLQNELKAGRIAHAYLFTGSRGTGKTTCAKILAKAV 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PCG C++C I+ G +D++EIDAAS VE+ R+L + + PA +++V Sbjct: 65 NCLSLKEGDPCGECESCVGIDNGSVMDVVEIDAASNNGVENIRNLREEASFTPAAAKYRV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+ KLP TILSRC +F +D E Sbjct: 125 YIIDEVHMLSIGAFNALLKTLEEPPAHVVFILATTEVHKLPATILSRCQRFDFHRIDPEV 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L+ + EE+ E A L+AR A+G +RDALSL DQ + +++ + VS G Sbjct: 185 IADRLQFVAGEENAHLEREAALLIARIADGGMRDALSLLDQCMGRS-SEITLEVVSETAG 243 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D SL + ++ NG + + I+E + L E+ G + +++ + Sbjct: 244 LAGRDHLFSLADTVLRQNGGQALEQIDELHKASKDMVRLCEELAGHFRNLMLLK----TM 299 Query: 303 GNDMAAIELRMRE------------LARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVE 350 N I + E LA TI D+ L ++ + DRR+ +E Sbjct: 300 KNPQNLIVVSQDEYQKLQVQAEAFTLAGTIHAIDV------LQAAKERMFRGFDRRVELE 353 Query: 351 MTLLR 355 M LL+ Sbjct: 354 MALLK 358 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 139/380 (36%), Positives = 219/380 (57%), Gaps = 12/380 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L RK+RP F +VVGQ H++ L N + RI HAYLF G RG GKTSIA++ AK Sbjct: 1 MAYQALYRKYRPSNFDEVVGQTHIIQTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC T PCGVC+NC+ G D+IEIDAAS V++ R+L+D V+YAP +G++ Sbjct: 61 TLNC-TNSQDAPCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQGKY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHM++ +FNALLKT+EEPP HV F+ ATT+P K+ TI+SRC +F + V Sbjct: 120 KIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTEPNKVLPTIISRCQRFDFNKVSV 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+++L + E I + L L+A+ A+G +RDALS+ DQ +A + + + Sbjct: 180 NDIKYRLSVVCKNEGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCTSHIDVNDIRKI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 G + + L ++ + + +R + I + + G++ + L + + +L ++ S Sbjct: 240 YGVITSEDIGQLFSSIYKKDVDRFIKDIQKYSDMGMDIKRLTADFIHMLKDSLILDYSEN 299 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQT---LLIGRKELPYAPDRRMGVEMTLLR- 355 + L +DM + +R+ ++ P I Q L+ + YA + +E +LL+ Sbjct: 300 STLVSDMN--KDMIRKYFKSAP---IHFRIQCMEELMDTYNKYTYASNALDYLEASLLKI 354 Query: 356 -ALAFHPRMPLPEPEVPRQS 374 + ++ P+ E E S Sbjct: 355 SSYSYEPKSNKFESEYDNNS 374 >UniRef50_B9D4Q0 DNA polymerase III subunit gamma/tau n=1 Tax=Campylobacter rectus RM3267 RepID=B9D4Q0_WOLRE Length = 906 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 125/242 (51%), Positives = 169/242 (69%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LA ++RP+ F+++VGQE V T+L + L R+ HAYLFSG RG GKTS AR+ +K L Sbjct: 3 QALALRYRPRNFSELVGQEAVSTSLTHALDESRLTHAYLFSGLRGSGKTSSARIFSKALV 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C+ G T+ PC C NC +GR +D+IE+DAAS ++D + L++ +YAPA RFK++ Sbjct: 63 CDHGPTSRPCEQCANCIAANEGRHIDIIEMDAASHRGIDDIKGLIEQTKYAPAIARFKIF 122 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS +FNALLKTLEEPP +VKF+LATTDP KLP T+LSR F + + + Sbjct: 123 IIDEVHMLSTPAFNALLKTLEEPPPYVKFILATTDPLKLPATVLSRTQHFRFRQISRPDV 182 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L+ ILN E++ HE AL++LAR+ GSLRD L+L DQAI G+++ V+ MLG Sbjct: 183 VAHLDFILNRENVPHEKEALEILARSGAGSLRDTLTLLDQAIIYAKGELTQSVVAQMLGL 242 Query: 244 LD 245 LD Sbjct: 243 LD 244 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 133/293 (45%), Positives = 191/293 (65%), Gaps = 1/293 (0%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q L RK+R QTF ++VGQEHV L N + G+I HAYLF G RG GKTS ARLLAK +N Sbjct: 3 QSLYRKYRSQTFDELVGQEHVKKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAKAVN 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C + T PC C C I +GR VDLIEIDAASR KVED D+++ V +APA R+KVY Sbjct: 63 CLSEGTK-PCNSCSACLSINEGRAVDLIEIDAASRRKVEDVADIIERVNFAPAELRYKVY 121 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+ H+FNALLKTLEEPP H F+LATT+ K+ TI+SRC +F + + +I Sbjct: 122 IIDEVHMLTTHAFNALLKTLEEPPAHAIFVLATTEVWKVLPTIISRCQRFDFRRITPREI 181 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 +L I E+I + AL +A+A+ GSLRDA+S+ DQ GD +++ + V +LG Sbjct: 182 VERLAFIAENENIKIQKDALIAIAKASTGSLRDAISILDQLTVYGDEEITLEHVKQLLGI 241 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 + +D + V A+++ + + ++L+ + + G++ E++ L + +++ Sbjct: 242 VGEDVVANFVGAIIDNDTQAALSLLTQLSEHGVDPRQFTQELVSYLRDLMLLK 294 >UniRef50_C1F0Z1 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0Z1_ACIC5 Length = 698 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 153/388 (39%), Positives = 225/388 (57%), Gaps = 25/388 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARK+RPQ F+DV GQEHV L N L+ GRI H Y+FSG RG+GKT+IAR+LA Sbjct: 1 MAYQVLARKYRPQRFSDVAGQEHVTRTLLNALAQGRIAHGYIFSGHRGIGKTTIARILAM 60 Query: 61 GLNCETGITAT----------PCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDN 110 LNC T I +T PCGVC++C EI VD++EIDAA+ +++ R+L + Sbjct: 61 ALNCRTPIGSTTGSPQRPTPEPCGVCESCEEIRLSNAVDVLEIDAATNRGIDEIRELREA 120 Query: 111 VQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRC 170 +Y P+R R+K+Y++DE H ++ +FNALLKTLEEPP+HV F++ATT+P+ +P TI SRC Sbjct: 121 ARYRPSRDRYKIYILDEAHQITDAAFNALLKTLEEPPDHVVFMMATTEPENIPQTIRSRC 180 Query: 171 LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--- 227 F A+ + I QL I +E+I E AL LLA A +GS+RDALS+ DQAIAS Sbjct: 181 QHFSFHAVKFDDILAQLRAIATQENIVAEDAALALLAEAGDGSMRDALSIMDQAIASARL 240 Query: 228 --GDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 G + +A+ ++G++ + L+EA+ E V+ +N G L + Sbjct: 241 ENGQPHLDAEAIRELMGSVPNTVFERLLEAISENQSAAVLEELNRLLNAGNSPVQLARQF 300 Query: 286 LGLLHRIAMVQLSPAALGNDMAAIELRMRELART------IPPTDIQLYYQTLLIGRKEL 339 + L M ++ G +++ E AR D+ + Q +L EL Sbjct: 301 VRYLRNTIMAKIG----GEQTDLLQISPDERARVGRSALLFSEEDLTRFLQIMLRTFDEL 356 Query: 340 PYAPDRRMGVEMTLLRALAFHPRMPLPE 367 Y ++R +E+ L++ + +P+ E Sbjct: 357 NYRQEQRFHLELGLIKLVHLQRLLPVEE 384 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 125/294 (42%), Positives = 192/294 (65%), Gaps = 1/294 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RP +F +VVGQ+H++T L N + +I HAYLF G RG GKT+IA+LLAK Sbjct: 1 MSYKALYRTYRPSSFEEVVGQQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE A PC C +C I+QG D++EIDAAS V++ R+L++ V+YAP GR+ Sbjct: 61 AVNCEDQQNA-PCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEGRY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+PQK+ TI+SRC ++ + Sbjct: 120 KVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQ 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ +L +EHI E AL+L+A+ A+G +RDALS+ DQ IA ++ V+ + Sbjct: 180 NEIITRVRCVLEQEHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQNHITAAHVNEI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAM 294 G + + +++ + + + ++ I +G++ + L +++ +L + Sbjct: 240 YGITTVSEKIEMLQWIFQHQAQSLLEKIRLLNEKGVDIKRLTSDLIEILKECVI 293 >UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPV7_LAWIP Length = 574 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 208/341 (60%), Gaps = 11/341 (3%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 LA ++RPQ+F +VVGQE V L+ + ++ AYL SGTRGVGKT+IAR+ AK LNC+ Sbjct: 6 LAIRYRPQSFKEVVGQEIVKKILSRAAAESKVVPAYLLSGTRGVGKTTIARIFAKALNCQ 65 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 TA PC C+ C+ I +G VD++EID AS V+D R L +++ YAP GR+KV++I Sbjct: 66 QAPTAEPCNTCEQCKRITKGIHVDVVEIDGASNRGVDDARRLRESIAYAPMEGRYKVFII 125 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DE HML+R SFNALLKTLEEPP F+ ATT+P K PVTI+SRC F LK L E++ + Sbjct: 126 DEAHMLTRESFNALLKTLEEPPPFSTFVFATTEPHKFPVTIISRCQHFVLKPLTKEELIY 185 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 L H+L +E+I +E A+QL+AR A GS+RD++SL Q + +G ++ V +LG + Sbjct: 186 NLIHVLKQENICYEDNAIQLIARRASGSIRDSMSLLGQTLMFSNGILTENVVRNVLGLAE 245 Query: 246 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM------LGLLHRIAMVQLSP 299 + L+ A + N E V+ L +G++ L E L LL +++ +L Sbjct: 246 QEFYEKLLRAFKDQNYEEVVKLNQILLEKGVDLGFFLREFATLWRNLFLLRKVS--KLDA 303 Query: 300 AALGNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKEL 339 LG M E+ R+ LA P + +Q +L ++++ Sbjct: 304 NMLG--MLPDEIPRLTSLANLFEPIYLHAAWQMVLENQRQI 342 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 178/484 (36%), Positives = 261/484 (53%), Gaps = 29/484 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L K+RP++FA++VGQE + T L N + +I AYLF+G RG GKTS AR+LAK Sbjct: 1 MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNC--ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC TA PCGVCD C+ I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP HV F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L I ++E+I P A+ L+A+ ++G LRDA SL DQ + G V+ V Sbjct: 181 QLEAMVKHLSAIASKENIHISPEAVTLVAQLSQGGLRDAESLLDQ-LGLLAGVVTPDRVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++GT+ + L L+ A+ + E V+ ++ RG E L + + + + + Sbjct: 240 DLVGTVSEQDLLGLLNAIAQDKPEAVLDSTHKILDRGREPLTFLQNLAAFYRDLLIAKTA 299 Query: 299 PAALGNDMAAIELR----MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 P +D+ A + + E A+ T I + L ++ + R+ +E+TLL Sbjct: 300 PNR--HDLVACTQQTWTALVEFAQYFDMTMILAGQEHLRKAEVQIKNSTQPRLWLEVTLL 357 Query: 355 RALA-----FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE-- 407 L P+ P P V + +P P AV V P + PQ L + Sbjct: 358 GLLPSATTNIQPQAPNIAPRVIPPAVSPSYPPAVTQNHAVSSLPVAEPQTNHNSTLRQGS 417 Query: 408 --TTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA 465 T V A+ Q GA + +K+ +AA P T A PVPSA Sbjct: 418 VTTNHHVAIAQNQPVTSSGAVEQQKNHNSAANSVSP-----------PTPEPVAVPVPSA 466 Query: 466 LEKA 469 + +A Sbjct: 467 IVEA 470 >UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 Tax=Frankineae RepID=A8KYB1_FRASN Length = 855 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/360 (41%), Positives = 208/360 (57%), Gaps = 10/360 (2%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 L ++RP TFA VVGQEHV AL + L GR+HHAYLFSG RG GKTS AR+LA LNCE Sbjct: 5 LYNRYRPATFAQVVGQEHVTEALGHALRSGRLHHAYLFSGPRGCGKTSSARILAASLNCE 64 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 G T PCGVCD C I G +D+ EIDAAS V+D RDL + +APA RFKV+++ Sbjct: 65 KGPTPEPCGVCDQCVSIRTGSSMDVTEIDAASHGLVDDARDLRERAFFAPASARFKVFVV 124 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DE HM++ +FNALLK +EEPP ++KF+ ATT+P K+ TI SR + + + +R Sbjct: 125 DEAHMVTAAAFNALLKVVEEPPSYLKFVFATTEPDKVIATIRSRTHHYAFRLVPPGVLRK 184 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAMLGTL 244 LE I +E + EP L L+ RA GS+RD+LS+ DQ +A +GDG +S + A+LG Sbjct: 185 HLESICAQEGVVVEPSVLPLVVRAGAGSVRDSLSVLDQLLAGAGDGGLSYERAVALLGMT 244 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D V+A+ E +G + +++ + G + ++L L + +V P A+ Sbjct: 245 DGILLDETVDALAERDGAALFTVVDSVVSSGHDPRRFATDLLDRLRDLIVVAAVPDAV-- 302 Query: 305 DMAAIEL-------RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + +E RMR A I P ++ L G E+ R+ +E+ L RAL Sbjct: 303 ERGLLEAFSTDQVDRMRAQAGRIGPVELSRTADVLHAGLVEMRGTASPRLLLELILARAL 362 >UniRef50_B1M6N3 DNA polymerase III, subunits gamma and tau n=6 Tax=Alphaproteobacteria RepID=B1M6N3_METRJ Length = 637 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 146/373 (39%), Positives = 220/373 (58%), Gaps = 9/373 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RP F D++GQ+ ++ LANG + RI A++ +G RGVGKT+ AR+LA+GL Sbjct: 27 YRVLARKYRPTNFGDLIGQDAMVRTLANGFAANRIPQAWMLTGVRGVGKTTTARILARGL 86 Query: 63 NC------ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 N +TG T + + +C I + R +D++E+DAAS T ++D R ++D ++Y P Sbjct: 87 NYARAGQPDTGPTVSMPELGLHCAAIMESRHMDVLEMDAASHTGIDDVRAIIDGIRYGPV 146 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+KVY++DEVHMLS +FNA LKTLEEPP H KF+ ATT+ +K+PVTILSRC +F L+ Sbjct: 147 SARYKVYIVDEVHMLSEKAFNAFLKTLEEPPPHAKFVFATTEIRKVPVTILSRCQRFDLR 206 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 ++ + L + E + E AL + RAAEGS+RDALSL DQAIA G G ++ Q+ Sbjct: 207 RVEAPTLHAHLAKVCAAEEVTVEDEALGAIVRAAEGSVRDALSLLDQAIAHGAGTITAQS 266 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V MLG D + L L EA++ + A + G + +L ++ H + ++ Sbjct: 267 VRDMLGLADRARILDLFEAVMRGSVPAAFAELRAQYDSGADPSVVLSDLAAFTHLVTRLK 326 Query: 297 LSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 + P A + + R+R A + + +Q LL E+ AP EM ++ Sbjct: 327 VVPEAAADPTLSETERVRGAAFADKLSIRALSRAWQILLKAIPEVQAAPRPLAAAEMAIV 386 Query: 355 RALAFHPRMPLPE 367 R LA+ +P P+ Sbjct: 387 R-LAYAADLPTPD 398 >UniRef50_A6DD60 DNA polymerase III subunits gamma and tau n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD60_9PROT Length = 487 Score = 265 bits (676), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 116/241 (48%), Positives = 175/241 (72%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 VLA K+RP+ F +++GQ+ ++ L N L+ RI +AYLFSG RG GKT+ AR+ +K L C Sbjct: 2 VLALKYRPKKFEEIIGQDAIIQTLINSLNSNRIANAYLFSGLRGSGKTTTARIFSKALQC 61 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 E GI+++PC C++C+ + R +D+IE+DAAS K+ED R+L+++ +Y P+ RFK+++ Sbjct: 62 EKGISSSPCEECESCKLANENRHIDIIEMDAASNRKIEDIRELIEHTKYKPSISRFKIFI 121 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHML+ +FNALLKTLEEPPE+VKF++ATTDP KLP TILSR F + ++I Sbjct: 122 IDEVHMLTNEAFNALLKTLEEPPEYVKFIMATTDPLKLPATILSRVQHFRFNKIPEKEIE 181 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 L+ +L +E++ E AL+L+ ++A+GS+RD+L+L DQAIA + ++ V MLG + Sbjct: 182 SFLQKVLIKENVKFEDEALRLIVKSAKGSVRDSLTLLDQAIAYSNYNITLDKVVEMLGVI 241 Query: 245 D 245 + Sbjct: 242 N 242 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 137/279 (49%), Positives = 190/279 (68%), Gaps = 3/279 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ FAD+VGQE + L+ L+ RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQCFADLVGQEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC+ T TA+PCG C+ CR I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCQQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFKVY+IDE HMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RFKVYVIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++ + L+ I +E I EP A+ L+A+ A+G LRDA SL DQ + V+ +AV Sbjct: 181 PLQAMTDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQ-LGLLPPPVTPEAVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIE 277 +LG + + Q L L+EA+ + E ++ LI + RG E Sbjct: 240 DLLGAVPERQLLQLLEAIAANDPEALLTLIRQLLDRGRE 278 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/360 (40%), Positives = 207/360 (57%), Gaps = 10/360 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQ F DVVGQEH+ L N + ++ HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQVFGDVVGQEHIERTLKNAIEQDKVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T+ P G C C+EI +G D+ E+DAASRT VE+ R+ ++ V +AP RG+ K+ Sbjct: 63 CEKGPTSEPDGSCRECQEIAEGVHPDVYELDAASRTGVENVREEIIGRVNFAPTRGKAKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDPQK+P TI SRC +F L E+ Sbjct: 123 YIIDEVHMLSIAAFNALLKTLEEPPAHVVFILCTTDPQKVPETIHSRCQRFDFHRLSNEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E++ E AL L+A A+G +R+AL+ +Q IA G+G+V+ +LG Sbjct: 183 IVSRLGAVCVAENVEFEGEALDLIAHRADGGMRNALTALEQLIAFGEGKVTVAGAEDLLG 242 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +LD ++ A+ + + + G + +M + + ++ L+ Sbjct: 243 SLDSSDLAEIMAAVGVRDAAACFSWVASYVETGADLAQFTRDMAQQVRNLYVMSLA---- 298 Query: 303 GNDMA--AIELRMRELA---RTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 G D A + RELA + P + L EL A ++R+ E+ L R + Sbjct: 299 GTDAALDVTDAERRELASELKLFGPNRLTHLLSILGELSSELRTASNQRLAFEIALTRMI 358 >UniRef50_A6GJ36 DNA polymerase III, gamma and tau subunits n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ36_9DELT Length = 747 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 150/369 (40%), Positives = 214/369 (57%), Gaps = 4/369 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y LARK+RPQ FAD++GQEHV L N + R+HHAYLF G RG+GKT+ AR+LAK Sbjct: 1 MAYLALARKYRPQRFADMIGQEHVTRTLENAIKSDRVHHAYLFCGVRGLGKTTAARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G T PC C +C I +GR VD+IEID AS V+D R L D V Y P R Sbjct: 61 CLVCEHGPTPEPCNQCVHCVGINEGRSVDVIEIDGASNNSVDDIRSLRDQVHYLPQIARR 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML++ +FNALLKTLEEPP HV FL ATTDP K+ TILSR + + + Sbjct: 121 KIYIIDEVHMLTQAAFNALLKTLEEPPPHVTFLFATTDPHKVLPTILSRVSRLDYRRVRA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG--QVSTQAVS 238 + L+ IL +E A EP L ++AR +GS+RD+L+L D+ IA ++ + V Sbjct: 181 ATLVPYLQFILEQEGFAVEPEGLYVIARCGDGSVRDSLTLLDKVIAFAHDPKAITGEEVL 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL- 297 +LG LV+A+++ + V+ + + G + L V +L L + ++ L Sbjct: 241 TVLGQASRYAVAELVQAILDRDAASVLQRFEQITSSGSDLMQLAVAILQHLRDLTVLSLT 300 Query: 298 -SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 S AAL + + +++ A PT + ++ + ++ R+ +EM LL Sbjct: 301 KSRAALLDMNDDLFEQLQRQAGATSPTVVAQHFDRFARVVDSIEHSRVPRLVIEMGLLEL 360 Query: 357 LAFHPRMPL 365 ++ P MPL Sbjct: 361 VSAEPLMPL 369 >UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunits gamma/tau dnaX n=2 Tax=Parachlamydiaceae RepID=Q6MDZ7_PARUW Length = 522 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 151/411 (36%), Positives = 228/411 (55%), Gaps = 22/411 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQV+ARK+RPQTF +V GQE V+T L N + R+ AYLF G+RG GKT++AR+ AK + Sbjct: 4 YQVIARKFRPQTFKEVFGQEAVVTTLKNAIKFKRLAQAYLFCGSRGTGKTTLARIFAKAI 63 Query: 63 NCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ PC C +CREI G +D++EID AS +ED R + + V YA G++K Sbjct: 64 NCQNSTEDFEPCNQCTSCREITSGSSLDVLEIDGASHRGIEDIRQINETVGYAATSGQYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHML++ +FNALLKTLEEPP VKF+ ATT+ K+ TILSRC +F+L + + Sbjct: 124 VYIIDEVHMLTKEAFNALLKTLEEPPPKVKFIFATTEAHKVLPTILSRCQRFNLSRIPLS 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 QI +L+ I ++ I E ALQLLA AEG LRDA SL DQ +A +G+++ V ++L Sbjct: 184 QIMIKLKLIADQLEIDVEEEALQLLAYKAEGGLRDAESLFDQIVAFSEGKINAATVQSIL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + + L A E N + + A G + + ++ I ++QL A Sbjct: 244 GLMPREAYFELDLAGKEGNFVKAFEIAYRIFAEGKDLNHFIEGLIDHFRHILLIQL--AG 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQ--------TLLIGRKELPYAPDRRMGVEMTL 353 + + + I + ++ LY Q L+ +++ + ++ +E L Sbjct: 302 ITSPLLTISPKEKQFYERAA----HLYTQEQCLDLIDYLIESAQQIRFTHSGKIALEAIL 357 Query: 354 LRALAFHPRMPLPEPEVPRQSFAP----VAPTAVMTPTQVPPQPQSAPQQA 400 L + H R+P+ EV Q + +++ + PP +S PQ + Sbjct: 358 LHVIRSHFRLPI---EVLVQRLGELEQMLGEASLVNSSVFPPLSKSTPQSS 405 >UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteobacteria RepID=Q1NUY3_9DELT Length = 706 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 142/363 (39%), Positives = 214/363 (58%), Gaps = 9/363 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+TFA+VVGQ V+ L N L L R+ HA LF+G RGVGKT++ARL+AK Sbjct: 1 MSYLVLARKWRPRTFAEVVGQRPVVRTLQNALRLQRVAHAMLFAGVRGVGKTTLARLMAK 60 Query: 61 GLNCETGITAT-PCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC+ A+ PC C +C+EI G VDL EID AS +++ R+L +N+++ P Sbjct: 61 ALNCQEPEPASRPCNQCKSCQEINAGAAVDLHEIDGASNRGIQEIRELKENIRFLPVSAS 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+ +IDEVHML+ +FNALLKTLEEPP HV F+ ATT+ K+P+TILSRC ++ L + Sbjct: 121 YKIVIIDEVHMLTTEAFNALLKTLEEPPAHVYFMFATTELHKIPITILSRCQRYELTRVA 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ + E + AL +++R A+GS+RD LSL DQ + DG + V Sbjct: 181 YDELLAFFRQVAAREEVTISEAALAMISREADGSVRDGLSLLDQVFSFADGGIDDDDVRQ 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D L A++ R + + + G+ + ++L + + + + Sbjct: 241 LLGLVDRRVFAQLARALLAGELGRALEIFDRGQRAGMNLKRFAADLLDYFRNLVVCRATA 300 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A LG + +EL E+A P + + LL G +E+ YA ++ +EMT++ Sbjct: 301 GARQLLELG-EQELVEL--EEIAAAHSPETLLYCFNLLLKGIEEMQYASRPKLVLEMTMV 357 Query: 355 RAL 357 RA+ Sbjct: 358 RAV 360 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 125/255 (49%), Positives = 174/255 (68%) Query: 6 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 65 L RKWRPQTF +VVGQEH++ L N L I HAYLF+G RG GKT+IAR+LAK LNC Sbjct: 5 LYRKWRPQTFEEVVGQEHIVITLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKALNCV 64 Query: 66 TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLI 125 G T TPC C++C EI +GR +D+IEIDAAS +++ RD+ + + P R R+KVY+I Sbjct: 65 QGPTPTPCLKCESCVEIAEGRSIDVIEIDAASNRGIDEIRDIREKARLLPVRDRYKVYII 124 Query: 126 DEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRH 185 DEVHML+ +FNALLK LEEPPEHV F++ATT+PQK+P+TILSRC +F + L +++ Sbjct: 125 DEVHMLTNEAFNALLKILEEPPEHVVFIMATTEPQKVPLTILSRCQRFDFRRLTRDEVIK 184 Query: 186 QLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLD 245 QL I +E AL+L+A ++GS+RDA+SL +Q + D +++ + +LG Sbjct: 185 QLAKIAEKEGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQEITEELARNLLGLPT 244 Query: 246 DDQALSLVEAMVEAN 260 + + +A+ E N Sbjct: 245 YEFTYNFAKALGEYN 259 >UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, putative n=2 Tax=Treponema RepID=Q73K31_TREDE Length = 612 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 165/466 (35%), Positives = 241/466 (51%), Gaps = 29/466 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQV A + RPQ F D++GQE V L + G+I HAYLFSG RG GKTS AR+LAK Sbjct: 1 MEYQVTATRRRPQRFEDLLGQEFVAATLQKSIEAGKIAHAYLFSGPRGCGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TPCG C +C EI G +D+IEID AS T V D R + D + + P R+ Sbjct: 61 VLNCAEGPRPTPCGHCTSCEEITAGSCLDVIEIDGASNTSVNDVRQIKDEILFPPNSNRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKT+EEPP +V F+ ATT+ K+P TI SRC QF+ K + + Sbjct: 121 KIYIIDEVHMLSTSAFNALLKTIEEPPPYVVFIFATTEIHKVPATIKSRCQQFNFKLVSI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E ++ L E I+ + AL +AR A GS+RDA +L DQ A DG ++ + + Sbjct: 181 EILKQALADAAAELGISADDEALYWIAREATGSVRDAYTLFDQVAAFSDGHITFEKIHEK 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ--LS 298 LG D LV A V NG+ +++++ GI E ++ + + +V+ ++ Sbjct: 241 LGLTGVDSINKLVSACVAKNGQEALSILDGILQGGISVEQVVSDCADYFRSLLLVKHGIT 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGR---------KELPYAPDRRMGV 349 AL I R P DI ++ + I R K+L ++ D+R + Sbjct: 301 KEAL------IGQRADRF-----PQDILQGWEAVQIERALSIMLQLFKDLRFSIDQRYEL 349 Query: 350 EMTLLRALAFHPRMP---LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP 406 E+ + R + L +S T V T +P + +S P+++P P Sbjct: 350 ELAVSRLSWLGDYVSPADLKTAFDAAKSLISSRRTDVETGRPLPHREESRPKESPR-PFD 408 Query: 407 ET---TSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER 449 T Q A ++ ++ T+ K E + P +N + E+ Sbjct: 409 NAGSLTEQFKAVLRRDNKLDVFTEKKNEEKQPVSNNVPSDNVSFEK 454 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/408 (36%), Positives = 226/408 (55%), Gaps = 4/408 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I ++ I++ E + E +L+++A AA+G +RDALSL DQAI+ + + + Sbjct: 181 QAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L +++ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPG 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-- 357 G + ++ REL+ IP + L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVA-PTAVMTPTQVPPQPQSAPQQAPTVP 404 + LPE ++ + + + T + +S ++AP VP Sbjct: 361 SHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESPKKEAPRVP 408 >UniRef50_C5ZV42 DNA polymerase III subunits gamma and tau n=2 Tax=Helicobacter RepID=C5ZV42_9HELI Length = 586 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 131/284 (46%), Positives = 181/284 (63%), Gaps = 4/284 (1%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + LA K+RP F ++VGQE V L+ L R+ HAYLFSG RG GKTS AR+ A+ L Sbjct: 5 EALALKYRPMDFDELVGQESVSRTLSLALESKRLSHAYLFSGLRGSGKTSSARIFARALQ 64 Query: 64 CETGITATPCGVCDNC--REIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 CE G A PCGVC NC + R +D+IE+D AS K++D RDL++ +Y P GR+K Sbjct: 65 CEKGPKAKPCGVCANCIAANPHKMRHIDIIELDGASSRKIDDIRDLIEQTKYHPNMGRYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +++IDEVHML++ +FNALLKTLEEPPE+VKF+LATTDP KLP TILSR F K + + Sbjct: 125 IFIIDEVHMLTKEAFNALLKTLEEPPEYVKFILATTDPLKLPATILSRTQHFRFKRISEK 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I L++IL++E+I ++ AL +L R+ GSLRD L+L DQ I + ++ + + ML Sbjct: 185 NIFEHLKNILHKENITYQDEALNMLIRSGSGSLRDTLTLLDQVIIYSNYNITADSCANML 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 G ++ L E + + + E ++ I E E LL EM Sbjct: 245 GLINPQSLNMLFEEIFKKDKESLLKHI--EGFSEYECEMLLDEM 286 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 137/356 (38%), Positives = 210/356 (58%), Gaps = 3/356 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP F++++GQ H+ + N L L + HAY+F+G RG GKT+IA+L+A L Sbjct: 2 YQALYRKYRPTNFSELIGQNHIKQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIATSL 61 Query: 63 NCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NCE+ PC C C+ I D++EIDAAS VE R++ + V YAP G++K Sbjct: 62 NCESLNNEGEPCNECSQCKAIRGNSHADVLEIDAASNNGVEQIREIREQVAYAPGTGKYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHMLS +FNALLKTLEEPP+HV F+LATTD K+P TI+SRC +F + + Sbjct: 122 VYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTDVHKIPATIISRCQRFDFRRIGPR 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ-AVSAM 240 I +L H+ +E + E ALQLL A+G +RDALSL DQ IA + T+ VS + Sbjct: 182 DIIERLRHVAIKEEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFATNETITKDDVSEV 241 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + ++ + + +++ N ++ LIN+ G E LL +++G L + + + Sbjct: 242 VGRISIEKIEACIGDLLKGNTIEILNLINQVILNGKEPIYLLEDLIGYLRDLVISKAFEV 301 Query: 301 ALGNDMAAI-ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 N AI + EL +Q+ + L + E+ ++ + ++ +E+ L++ Sbjct: 302 KEDNITTAILNSKFYELLEEGEIHKMQMMIRKLTEVKNEMKFSNNAQVSLEVGLIQ 357 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 135/354 (38%), Positives = 219/354 (61%), Gaps = 2/354 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RKWRP+TF+++VGQE ++ L N ++ ++ HAYLFSG RG GKT+ A++LAK + Sbjct: 2 YLALYRKWRPKTFSEIVGQETIVKILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE + PC C +C I +++ EIDAAS +++ R+L ++++ PA+G++KV Sbjct: 62 NCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGIDEIRELRESIKLVPAQGKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPPEHV F+LATT+ K+PVTI+SRC +F K + + Sbjct: 122 YIIDEVHMLTNEAFNALLKTLEEPPEHVIFILATTEFNKVPVTIVSRCQRFDFKRISTKT 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L++I +E + +E AL L+A A+EG LRDALSL DQ I + +++ + +LG Sbjct: 182 IWEHLKNIAEKEKLQYEAEALHLIAEASEGGLRDALSLMDQ-ILVFNPKITVEDTLKVLG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + L L+ A+ E N +++ I E RG++ + + ++L + + +++ + + Sbjct: 241 FVSWRKILELISAIRENNQLKIINEIAEVVERGLDVKLFVQQILQYVRYLNLIK-NGIEV 299 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 M + ++R A + L + + +E+ YA R+ E+ LL+ Sbjct: 300 EELMPEVLEKLRSEAALWEEDKLFLLWDDIARLEREVRYASFPRIWAEVGLLKV 353 >UniRef50_Q4FNB0 DNA-directed DNA polymerase gamma/tau subunit n=3 Tax=Candidatus Pelagibacter RepID=Q4FNB0_PELUB Length = 557 Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 130/361 (36%), Positives = 220/361 (60%), Gaps = 9/361 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 +VLA K+RPQTF D++GQ+ V ++N + ++ +AYLF+G RG+GKT+ AR++AK LN Sbjct: 6 KVLALKYRPQTFNDLIGQDVVAETISNSIKANKVPNAYLFTGIRGIGKTTTARIVAKSLN 65 Query: 64 CETGITATPCG--VCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 C GI C +C+NC I +D++E+DAAS+T V+D RDL++ +Y P ++K Sbjct: 66 CSNGID-NLCKEELCENCNAISNSNHIDVLEMDAASKTGVDDVRDLIEFSRYGPTTAKYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +++IDEVHMLS+ +FNALLKTLEEPPE++KF+ ATT+ +K+P+T++SRC +F L + Sbjct: 125 IFIIDEVHMLSKQAFNALLKTLEEPPEYLKFIFATTEIKKIPITVVSRCQRFDLSRIKSL 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--GDGQVSTQAVSA 239 ++ + I +E+ AL+L+ + +EGS+RDALSL D+A+ + D ++ A Sbjct: 185 ELFDFIRKIKEKENGNASDDALKLIVKISEGSVRDALSLLDRALLTLDKDKELDLAAAQK 244 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 + G D Q + L E + E V+ E +G+E + + + L LL+ + S Sbjct: 245 IFGYFDKSQLIDLFELIFEGKETEVLNTYREIYNQGVEPKIFINDFLELLYYFKNID-SL 303 Query: 300 AALGNDMAAIE---LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 GN+ + ++++L+ + + L++Q + +EL ++ + +EM L+R Sbjct: 304 NLDGNNFLLNDEEFNKIKDLSEKVNNETLILFWQFTIKTLEELDIVSNQHLSMEMFLIRL 363 Query: 357 L 357 + Sbjct: 364 I 364 >UniRef50_B2KES0 DNA polymerase III, subunits gamma and tau n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES0_ELUMP Length = 627 Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 134/300 (44%), Positives = 191/300 (63%), Gaps = 9/300 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L+ K+RPQTF DVVGQE + L N + LGR+ HAYLF G RG GKT+ AR+ AK L Sbjct: 11 YISLSNKYRPQTFEDVVGQETISKTLTNAIKLGRVGHAYLFYGPRGCGKTTSARIFAKAL 70 Query: 63 NCETGI----TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPAR 117 NC TG A+PCG C C EI G +D++E+DAAS T+V+ R+ ++D V A R Sbjct: 71 NC-TGNGNKPAASPCGKCPQCIEIANGSDMDVLELDAASNTQVDKIREAIIDTVALAATR 129 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 RFK++++DEVHMLS SFNALLKT+EEPP HV F+LATT+ K+P TI SRC F + Sbjct: 130 DRFKIFILDEVHMLSDSSFNALLKTIEEPPAHVVFILATTEKHKVPATISSRCQTFRFRP 189 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + E I L + +E+I EP+A+Q++A A G+LRDAL++ D+AIA DG ++ + V Sbjct: 190 ITQEDISAHLTALAQKENINIEPKAVQIIASQAGGALRDALTILDRAIAYSDGSITEELV 249 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM---LGLLHRIAM 294 MLG + +D + V+A+++ N + + G + + L ++ LG L +++ Sbjct: 250 IDMLGLMPEDILKAAVKAVLKKNYNEMHTVFETIQMEGFDPLSFLRDLKNALGDLFYLSI 309 >UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGG2_9ACTN Length = 862 Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 129/251 (51%), Positives = 168/251 (66%), Gaps = 1/251 (0%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQTF DVVGQ H+ + N L R+ HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQTFDDVVGQIHIERTIKNALESDRVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T P G C+ C I +G D+ E+DAASRT VE+ R+ ++ VQ+AP RGR+K+ Sbjct: 63 CEKGPTPAPDGECEQCLAIAEGTHPDVNEMDAASRTGVENVREEIIGRVQFAPVRGRYKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDP K+P TI SRC +F L E+ Sbjct: 123 YIIDEVHMLSTAAFNALLKTLEEPPSHVVFILCTTDPHKVPATIHSRCQRFDFHRLANEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E + E AL+L A+ A+G +RDAL+ +Q IA G+G+V+ Q +LG Sbjct: 183 IIARLGAVCASEGVEFEAEALELAAKRAQGGMRDALTTLEQLIAFGEGRVTMQVALDVLG 242 Query: 243 TLDDDQALSLV 253 LD + +V Sbjct: 243 ALDSNDMTDIV 253 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 129/243 (53%), Positives = 167/243 (68%), Gaps = 1/243 (0%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQTF DVVGQ HV L N L + HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQTFDDVVGQTHVERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T +P G C+ C+ I +G D+ E+DAASRT V++ R+ ++ VQ+AP RGR+K+ Sbjct: 63 CEHGPTPSPDGTCEECQLIAEGAHPDVNELDAASRTGVDNVREEIIGRVQFAPTRGRYKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPP HV F++ TTDPQK+P TILSRC +F L E+ Sbjct: 123 YIIDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTDPQKIPETILSRCQRFDFHRLSNEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E + E AL L+AR A+G +RDAL+ +Q IA G G V+ +A LG Sbjct: 183 IVSRLGAVCMAEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAGNVTMDVANAALG 242 Query: 243 TLD 245 +LD Sbjct: 243 SLD 245 >UniRef50_C9M8I9 DNA polymerase III gamma and tau subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8I9_9BACT Length = 648 Score = 260 bits (665), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 171/429 (39%), Positives = 230/429 (53%), Gaps = 31/429 (7%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L R++RPQ+F+DVVGQ + + LS GRI HAYLFSG RG GKT++ARLLAK + Sbjct: 2 YQSLYRRYRPQSFSDVVGQTVAVDVITRSLSSGRIGHAYLFSGPRGCGKTTVARLLAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC A PCG C +C I GR +D++EID AS V++ R+L NV A G +KV Sbjct: 62 NCTARNGAEPCGQCQSCLAIRDGRSLDVVEIDGASNNTVDEVRELKANVGLASFGGNWKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPPE V F+LATT+P K+P TI SRC L V Sbjct: 122 YIIDEVHMLSASAFNALLKTLEEPPERVMFILATTEPHKVPATIRSRCQHIPFHGLSVPD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I QL+ + E ++ E AL +AR+++G +RD LSL +Q IA G G V+ AVS + G Sbjct: 182 IVSQLKDVTAREGLSAESEALWEIARSSDGGMRDGLSLLEQVIALGGGSVTKAAVSQLTG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALL------VEMLGLLHRIAMVQ 296 ++ S + ++ + R ++++++ G E L+ V L LL R Sbjct: 242 GGSTEEIQSWL-SLCRTDPARSVSVLSDMFLSGALPERLVSNVFSSVRNLWLLVRWGQAG 300 Query: 297 LSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMG-------V 349 L+ A D LR E AR + ++ L+ L R MG V Sbjct: 301 LAGTAFSEDEEGWLLREGEAARGHSGS-----LESFLVRLAALTPQIRRGMGSSVVAGLV 355 Query: 350 EMTLLRALAF-HPRM---PLPEPEVPRQ----SFAPVAPTAVMTPTQVP----PQPQSAP 397 M + AL+ P + P+ +P +P S AP AP T V P AP Sbjct: 356 SMWAVDALSGKEPAVAEPPVMKPSIPANRVFSSPAPAAPAQDGGKTGVSSEREPSASRAP 415 Query: 398 QQAPTVPLP 406 + A TV LP Sbjct: 416 EPALTVDLP 424 >UniRef50_UPI0001977980 DNA polymerase III subunits gamma and tau n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001977980 Length = 562 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 129/289 (44%), Positives = 183/289 (63%), Gaps = 2/289 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS LA K+RP +F+D+VGQ + L+ L I HAYLFSG RG GKTS AR+ A+ Sbjct: 1 MSSIALALKYRPASFSDLVGQNAISQTLSLALDSKHISHAYLFSGLRGSGKTSSARIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE+G +TPCG C +C + R +D+IE+DAAS ++D + L++ +Y P+ GR+ Sbjct: 61 ALECESGPISTPCGSCASCVAALENRHIDIIEMDAASSRGIDDIKKLIEQTKYRPSFGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS+ +FNALLKTLEEPPE VKF+LATTDP KLP TILSR F K + Sbjct: 121 KIFIIDEVHMLSKEAFNALLKTLEEPPEFVKFILATTDPLKLPATILSRTQHFRFKQIPH 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + +ILN+E +++E AL+++AR+ GSLRD L+L DQAI + +VS M Sbjct: 181 RLVVEHITNILNKEGVSYEQEALEMIARSGSGSLRDTLTLLDQAIIFCKNHIEVASVSDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 LG +D + ++ ++V ++ E E +L EM+ L Sbjct: 241 LGIVDPQVLKEYFQGILHHQHDKVSGILQ--VLYEYECEMILDEMMLFL 287 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 132/299 (44%), Positives = 191/299 (63%), Gaps = 1/299 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ F DVVGQ ++T L N L GRI HAYLF+G+RG GKT+ ARL+AK Sbjct: 1 MAYEPLHHKYRPQRFGDVVGQGPIVTTLTNALKAGRIAHAYLFTGSRGTGKTTTARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+ C I G +D+IEIDAAS T V++ R+L++ Q+AP + R Sbjct: 61 ALNCIHGPTPDPCGRCEQCLAIATGSALDVIEIDAASNTGVDNIRELIERAQFAPVQSRQ 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHMLS +FN LLKTLEEPP HV F+LATTDPQK+ T++SRC +F + + + Sbjct: 121 KVYILDEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTDPQKVLPTVISRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + LE I +E I E A++L+A+ A+G LRDA SL DQ +A +G + + + + Sbjct: 181 TDMVKHLEEIAWKEDIDIEHEAVELVAQIAQGGLRDAESLLDQ-LALLEGTIGAERIWQL 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +G + + + L + E + + R++ + G E +L ++LG + + +P Sbjct: 240 VGAVPERELLVIGECIQAGDSTRLIEQVRRLLDSGKEPLQVLQDLLGFYRDLLIAHTAP 298 >UniRef50_C8PCQ5 DNA polymerase III n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PCQ5_9LACO Length = 605 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 187/289 (64%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R+WRP+TF VVGQ + L N + +I HA+LFSG RG GKTS A++ AK Sbjct: 23 MAYQALYRRWRPRTFEAVVGQSAICDTLRNSIKRHKISHAFLFSGPRGTGKTSCAKIFAK 82 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C NC ++G D+IEIDAAS V++ R + D V+YAP +G + Sbjct: 83 AINCMDSKDGEPCNQCSNCLAADKGILNDIIEIDAASNNGVDEIRAIRDKVKYAPTQGYY 142 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEHV F+LATT+ QK+P TI+SR +++ K + Sbjct: 143 KVYIIDEVHMLSIGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISN 202 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ +++ IL++E IA++ ++LQ++A+ A+G +RD+LS+ DQ ++ +++ Q A+ Sbjct: 203 DQLVARMKFILDQEKIAYDEKSLQVIAQVADGGMRDSLSILDQILSYDQAKINYQDTLAI 262 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 G D + +L ++ + + + E G + +L E++ L+ Sbjct: 263 TGYADQVKIEALFLDLLNKKTSQALEEVEELLNNGASAKNILDEIINLV 311 >UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 Tax=Verrucomicrobia RepID=B1ZQU6_OPITP Length = 395 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 136/284 (47%), Positives = 182/284 (64%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 YQV+ARKWRPQTF DVVGQ+HV+ L N ++ RI HAYLF G RG GKTS AR+ AK Sbjct: 5 GYQVIARKWRPQTFDDVVGQDHVVRTLKNAIARNRIAHAYLFVGPRGTGKTSTARIFAKA 64 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC G A C+ I +G +D+IEID AS V+ RDL D VQYAPA+GR+K Sbjct: 65 LNCTDGPKADFDPNDPACKAIAEGSHLDVIEIDGASNNGVDQVRDLRDTVQYAPAQGRYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHMLS +FNALLKTLEEPP HVKF+ ATTDPQK+ TI+SRC +F LK + + Sbjct: 125 VYIIDEVHMLSAAAFNALLKTLEEPPGHVKFVFATTDPQKVLPTIISRCQRFDLKPIPPD 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L+ I E I AL+ +AR A+G +RDA S+ DQ I+ +S V + Sbjct: 185 LIIARLKQIAASEKITISAAALECIARMADGGMRDAQSILDQMISFCGTDISEADVLDVY 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 G + ++ L A+ + +++A++++ G + LL ++ Sbjct: 245 GLVSAEKIAELAGALAAGDHRKIVAIVDDCDTNGRDLVRLLSDL 288 >UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfovibrio RepID=B8DQU3_DESVM Length = 688 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/303 (43%), Positives = 187/303 (61%), Gaps = 1/303 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RPQTFA+V GQE V L+ + R+ AYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE T PC C+ CR++ G VD++EID AS +ED R L + + YAP GR+ Sbjct: 61 ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F K L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L E +P A++L+AR A GS+RD++SL Q +A G +++ + + Sbjct: 181 NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-QLSP 299 LG + +++A+ + V A++ + +G++ L E+ + M+ Q Sbjct: 241 LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE 300 Query: 300 AAL 302 AAL Sbjct: 301 AAL 303 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 138/358 (38%), Positives = 209/358 (58%), Gaps = 1/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV ARK+RP TF DV+GQ+HV+ L N + R+ HAYLF G RG GKTS AR+ AK Sbjct: 1 MSYQVFARKYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G D C EI +GR +D++EID AS ++ RDL DNV++AP+RG F Sbjct: 61 ALNCSGGPKVDFDPHEDICEEIAEGRSLDVLEIDGASNRGIDHIRDLRDNVRFAPSRGNF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++ IDEVHML++ SFNALLKTLEEPP HVKF+ ATT+P K+ TILSRC +F L+ + Sbjct: 121 RIVYIDEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HI + E ++ A +A+ A+G +RDA S+ DQ ++ + Q V + Sbjct: 181 EIIAEHLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + ++ ++ L++E A G + L E++ + I + ++ P Sbjct: 241 FGITSRETVAHALALILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPE 300 Query: 301 ALGNDMA-AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A + + + + + EL + I + L ++ ++ ++R+ +EM L++A+ Sbjct: 301 ASFDSLPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWSTNKRLHLEMGLIKAV 358 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/289 (42%), Positives = 185/289 (64%), Gaps = 1/289 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y+ L R +RP +F +V GQ+H++ L N + +I HAYLF G RG GKTSIA++ AK Sbjct: 7 MGYKALYRTYRPNSFDEVAGQKHIVKTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFAK 66 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE+ PC CDNC ++ G D+IEIDAAS VE+ R+L++ V+YAP +G++ Sbjct: 67 VINCESK-EHKPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPLKGKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKT+EEPPEHV F+LATT+P K+ TI+SRC +F + Sbjct: 126 KVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPK 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ IL +EHI + ++L+A+ A+G LRDALS+ DQ IA + Q ++ + Sbjct: 186 NEIVSRIHTILEKEHIECDDDVIELIAQLADGGLRDALSILDQCIAYATNHIELQHINEI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLL 289 G + + L + +M +++ +G++ L V+++ LL Sbjct: 246 YGITTVQEKMKLFHHIFNNEPVDLMDMLDGMLEKGLDIPRLTVDLIELL 294 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/285 (44%), Positives = 181/285 (63%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ F +V QEH+ L + ++ RI HAYLF+G RGVGKTS+AR+LAK Sbjct: 1 MSYIVLARKYRPQNFKEVYAQEHITEILQSAIATNRIAHAYLFTGPRGVGKTSLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC C NC EI G D+IEID AS T V+D R+L + Y + + Sbjct: 61 SLNCVNGPTTTPCNACSNCLEITAGTSPDVIEIDGASNTSVDDIRELQRELLYPASSSNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS+++FNALLKTLEEPP++V F+ ATT+PQK+ TI+SRC ++ K + + Sbjct: 121 KIYIIDEVHMLSKNAFNALLKTLEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIPI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I + +L L+AR A+G +RDALSL DQAI+ ++ V + Sbjct: 181 ASIVQRLQEISVLEGIKIDSESLYLIARKADGGMRDALSLMDQAISYCLNNITIDKVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 285 G + + + + + + ++ ++ +GI+ + + M Sbjct: 241 FGMIPNQVYQKFLTLIYNKDTQGLINELHLIFEQGIDLQEFIANM 285 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 120/297 (40%), Positives = 197/297 (66%), Gaps = 2/297 (0%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+V+ARK+RPQTF +V+GQEH+ ++ ++ +I HAYLFSG GVGKTS+AR++AK Sbjct: 4 NYKVIARKYRPQTFEEVIGQEHITKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIAKA 63 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC G T PCGVC +C +IE G +D+IEID AS +E+ R +++NV+ +P G++K Sbjct: 64 LNCVNGPTDKPCGVCPSCTQIENGTPLDVIEIDGASNRGIENIRTIIENVRISPVAGKYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVH ++ +FNALLKTLEEPP HV F+LATT+ +++ TI SRC Q+ K+L +E Sbjct: 124 VYIIDEVHQITNEAFNALLKTLEEPPAHVVFILATTEAERVLPTIRSRCQQYTFKSLGIE 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQA-VSA 239 + L+ IL++E+I ++ A+ L+A+ A GS+RD+ ++ ++ IA + D + T A V+A Sbjct: 184 DLEKILKGILDKENIKYDEEAIFLIAKQARGSVRDSETILEKMIAYTTDKKYITSADVNA 243 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 ++G + + M+E + + + + ++ + ++ + + M++ Sbjct: 244 VVGGNNFSFVKGFFDIMIEGDKRKYFEFVKKLFEEAVDPRTFINSIIEYIRVVLMIK 300 >UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 Tax=Dehalococcoides RepID=A5FRM9_DEHSB Length = 570 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 135/297 (45%), Positives = 182/297 (61%), Gaps = 1/297 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ QV RKWRPQT AD+VGQEHV L N LS GRI AYLF G RG GKTS R+LAK Sbjct: 4 MTCQVFYRKWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRILAK 63 Query: 61 GLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC T PC C C I +G +D+IEIDAAS T V+D R+L + VQY+P+ Sbjct: 64 AVNCTTNQGKGEPCNTCPMCLSITEGSSMDIIEIDAASNTGVDDIRELKEKVQYSPSLAN 123 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDEVHMLS + NALLKTLEEPP V F+LATT+ K+ TI+SRC +F + Sbjct: 124 YKVYIIDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFHRVS 183 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + + +L I E I EP AL+L+AR+A GS RD +L Q + ++S V A Sbjct: 184 LVDMTRKLGKISLAEGINVEPEALKLIARSAGGSFRDGENLLQQIATTYGAEISLSQVQA 243 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 LG D++ +L E +++ + + + +N A G++ + E+L L +I +V Sbjct: 244 ALGISGDERIKALAENILKKDIKNGLKTLNAVLADGLDLKQFRRELLDYLRQIMLVN 300 >UniRef50_Q1JL73 DNA polymerase III subunit gamma/tau n=74 Tax=Streptococcaceae RepID=Q1JL73_STRPC Length = 561 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 125/243 (51%), Positives = 165/243 (67%), Gaps = 1/243 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+R QTF ++VGQ + T L + G+I HAYLFSG RG GKTS A++ AK + Sbjct: 2 YQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGKTSAAKIFAKAM 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PC CD CR+I G D+IEIDAAS V++ RD+ D YAP+R +KV Sbjct: 62 NCPNQVDGEPCNQCDICRDITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEP E+V F+LATT+ K+P TILSR +F KA+ + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKAIKQKA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 IR L +L++E +A+E AL L+AR AEG +RDALS+ DQA++ S D QV+ + Sbjct: 182 IREHLAWVLDKEGLAYEVDALNLIARRAEGGMRDALSILDQALSLSPDNQVTIAIAEEIT 241 Query: 242 GTL 244 G++ Sbjct: 242 GSI 244 >UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 Tax=Chloroflexus RepID=B8G7M2_CHLAD Length = 613 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 131/276 (47%), Positives = 182/276 (65%), Gaps = 1/276 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L RKWR QTFA++VGQEHV+ L N ++ R+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MAVQSLYRKWRSQTFAELVGQEHVVQTLRNAIAEDRVGHAYLFTGPRGVGKTTMARLLAK 60 Query: 61 GLNC-ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC +A PCG C+ C I +GR VD+IE+DAAS T VED R++++ VQ+ P+ R Sbjct: 61 AVNCLHPDPSARPCGTCEMCTAIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPSVAR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 KVY+IDE HMLS +FNALLKTLEEPP+H F+LATT+ K+P TILSRC +F Sbjct: 121 MKVYIIDEAHMLSTAAFNALLKTLEEPPDHALFILATTEVHKVPATILSRCQRFTFVRHS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V + + I E I A + +ARAA GS+RDAL + +Q + +G ++ Q V + Sbjct: 181 VTSMAAHVRRIAAAEGIVLVEGAPEAIARAATGSMRDALGILEQLASFVEGPITLQHVQS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARG 275 +LG + +L+EA++ A+ + +N A +G Sbjct: 241 LLGMTAAAEVDALIEALLSADLTAALRAVNAVANQG 276 >UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 Tax=Ammonifex degensii KC4 RepID=C9RAG1_AMMDK Length = 427 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 132/272 (48%), Positives = 175/272 (64%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q L R WRPQ FA VVGQ HV L N L++GRI HAYLF+G RG GKTS AR+LAK LN Sbjct: 5 QALYRAWRPQQFAQVVGQAHVTRTLRNALAMGRIAHAYLFAGPRGTGKTSTARILAKALN 64 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C G T PC C C I +G +D++EIDAASR +++ R+L + V+ +P R+KVY Sbjct: 65 CLQGPTPVPCDTCPQCLSIMEGTSLDVLEIDAASRRGIDEMRELRERVRLSPVHSRYKVY 124 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDE HML+ + NALLKTLEEPP V F+LATT+P K+PVTILSRC +F + L I Sbjct: 125 IIDEAHMLTSEAANALLKTLEEPPPQVVFILATTEPHKIPVTILSRCQRFDFRRLPTALI 184 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L + + E AL+LLA+AAEGS+RDALSL DQA+A +G++ V+ +LG Sbjct: 185 EEHLARVAETFPVKVEREALRLLAQAAEGSMRDALSLLDQALAWAEGELRAIDVADLLGK 244 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARG 275 + ++ + + + + L+NE RG Sbjct: 245 VPSQALEEMLTYLQKGDLAGALRLVNEIEERG 276 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 150/366 (40%), Positives = 223/366 (60%), Gaps = 15/366 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQTFAD+VGQ+ + L N + RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQTFADLVGQDVIAQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLAK 60 Query: 61 GLNCETGI--TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + T +PCG C+ C I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLSYDHPTPSPCGTCNVCVGITKGSTLDVIEIDAASNTGVDNIRELIERSQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDEVHMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTDPQRVLATIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L HI EE I A+Q++A+ A+G LRDA SL DQ ++ G+++ + V Sbjct: 181 PLEAMVKHLHHIAIEEKIDITTEAIQMIAQIAQGGLRDAESLLDQ-LSLLAGEITVERVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++G + + + LVEA+ N +V+ + RG E +L + G + + + + Sbjct: 240 DLVGAVPERDLMVLVEAIAADNSIKVLKCTRQIMDRGKEPIIVLQNLAGFYRDLLIAKTA 299 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDR-------RMGVEM 351 P + N +A + +L + DI T+L G+K L + + R+ +E+ Sbjct: 300 PTS-KNLVALTKPTWEKLCQFSQDWDI----GTILAGQKHLQTSEVQIKNTTQPRLWLEV 354 Query: 352 TLLRAL 357 TLL L Sbjct: 355 TLLGLL 360 >UniRef50_B1C8Q2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8Q2_9FIRM Length = 645 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 118/287 (41%), Positives = 186/287 (64%), Gaps = 1/287 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VL R++RP+ F +++GQ++++ L N + I HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYTVLYREFRPKNFEEIIGQDNIVNILKNQIKNDSISHAYLFSGIRGTGKTSTAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 + C C C +C +I G D++EIDAAS +++ RDL + V Y P GR+ Sbjct: 61 SICCLNNKEGEACNECASCNDINIGDGADIVEIDAASNRGIDEIRDLKEKVNYMPNFGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H+ F+ ATT+P K+ TILSRC +F +D Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPSHIVFIFATTEPNKILPTILSRCQRFDFNRIDS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 E + + L IL+++ I +E AL+L+A EG+LRDALSL D+AI+ D +++ + Sbjct: 181 EVVVNHLASILDKKEIEYEKEALELIALNTEGALRDALSLLDKAISVVKDNKITKETADD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEML 286 +LG + D++ L + ++E + ++ + +++ +G E +++ +++ Sbjct: 241 ILGLISDEEIFLLAKGILENDVDKSLNAVHDFLNKGREVGSIITQLM 287 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 160/416 (38%), Positives = 232/416 (55%), Gaps = 16/416 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L R+WRPQ FAD+VGQ+HV L N L R+ HAYLF G RG GKTS A++LAK + Sbjct: 2 YQALYRQWRPQFFADMVGQQHVARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILAKAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE G + PC C CR I+ GR +D+ EIDAAS +++ R+L + +Y+P R KV Sbjct: 62 NCEKGPSREPCNECAACRGIQAGRVMDVQEIDAASNRGIDEIRELREKARYSPVEVRHKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRC--LQFHLKALDV 180 Y++DEVHML++ +FNALLKTLEEPP V F+LATT+P KLP TI+SRC L FHL + + Sbjct: 122 YIVDEVHMLTQEAFNALLKTLEEPPGRVLFVLATTEPHKLPATIISRCQRLDFHL--IGM 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L ++++ + + AL L+A A G LRDALSL +Q +A +G +S + V A+ Sbjct: 180 TDIAERLRSVVDDSGRSIQDDALYLIAEEAAGGLRDALSLLEQIMAYSEGNISDEDVLAV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D ++++ + + L+ E AA G + + + +R MV L+ Sbjct: 240 LGAVGRDVYYRFTDSLLRRDLAAALLLLQEVAAGGKDLHHFTRQAIS-YYRDLMVALT-- 296 Query: 301 ALGNDMAAIEL------RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 G+D A+ + R+ + AR + I L E+ +A R+ E+ + Sbjct: 297 -CGDDAVALGIAPDWAGRLHKQARQLGMGTIGHILSELHGLLNEVRWASRPRLLWELAIF 355 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 R +A P+ + E+P A V P + P Q Q+ P ET S Sbjct: 356 RIMA--PQAEDRQQELPVSKPADVKPDNTPVVKETPAQNSFPEQKRAAEPAGETAS 409 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 136/357 (38%), Positives = 212/357 (59%), Gaps = 2/357 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ F D+VGQ+HV L N L ++ HAYLFSG RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPKNFKDMVGQDHVTKTLTNALMQSKVAHAYLFSGPRGTGKTTTAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PC C C I+QG +++ EIDAAS +++ RDL D V+ + ++ Sbjct: 61 ALNCEHREGVEPCNQCAFCLSIDQGSAMEVFEIDAASNRGIDEIRDLRDKVRLSAGESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPE V F+LATT+ K+P+TILSR +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPERVVFILATTEVHKIPLTILSRVQRFEFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ + EP ALQ++A+ +EG LRDALS+ DQ + DG++ + V + Sbjct: 181 EQIHSHLDKVCQTIGRDVEPEALQIIAQKSEGGLRDALSILDQCLLL-DGKLGVEQVYQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + ++ + LV+ ++ + + + + E +G++ ++ E+L + R A++ S Sbjct: 240 LGMVGEEFSAQLVDHLLTGDYAKALGCLGEGINQGMDPRQIIRELLDYM-RQALLYASTQ 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A + + + + + + LL G +L YA + R+ E+ L++ + Sbjct: 299 AFPQVAPHLREHLAYQCQKLGLKTLLQWIGILLQGESQLKYAANARLAAELLLVQVI 355 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 258 bits (658), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 117/283 (41%), Positives = 182/283 (64%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RP+ F D+VGQEH+ L N L L +I+HAY+F+G RG GKT+ AR+LAK LN Sbjct: 2 EALYRKYRPKNFYDIVGQEHIKKLLTNALKLQKINHAYIFAGPRGTGKTTTARILAKSLN 61 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE PC C +C+ I+ G +D+IE+DAAS +++ R + + V + P G++KVY Sbjct: 62 CEKNQFGEPCNECTSCQAIDNGSHLDVIELDAASNRGIDEIRKIKEGVNFTPVMGKYKVY 121 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+R +FNALLKTLEEPP+H+ F+LATT+P+K+P TI+SRC + + E I Sbjct: 122 IIDEVHMLTREAFNALLKTLEEPPQHIVFILATTNPEKIPPTIMSRCHVLEFRNISEENI 181 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 +L+ + +E AL+ +A+ AEG LRDALS +Q I G+V+ + V LG Sbjct: 182 ISKLKSVCEKEGFDVTYEALKKIAKRAEGGLRDALSTLEQVIRYTGGEVTEKIVDEALGL 241 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEML 286 + ++ +EA + + E + ++N+ +++ + +++ Sbjct: 242 ISEETIEKFIEATLNNDRELIEKILNDIYIERGDFDTFINQLI 284 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 137/298 (45%), Positives = 197/298 (66%), Gaps = 1/298 (0%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+ L K+RPQ FADVVGQ V+ LAN + LGR+ AYLF G RG GKTS AR+LAK Sbjct: 6 NYEPLHLKYRPQRFADVVGQGAVVQTLANAIRLGRVAPAYLFCGPRGTGKTSSARILAKS 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNCE G T PC C CR I G +D++EIDAAS T V++ R+L++ Q+AP R+K Sbjct: 66 LNCEQGPTPDPCQACSQCRAITAGASLDVLEIDAASNTGVDNIRELIERAQFAPVNSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDE HMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + ++ Sbjct: 126 VYVIDECHMLSNAAFNALLKTLEEPPPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L I +E I P ALQL+A+ ++G LRDA L DQ ++ +G ++ +AV ++ Sbjct: 186 DMVAHLGKIAAQEGIPITPEALQLVAQLSQGGLRDAERLLDQ-LSLLEGSITPEAVWDLV 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 G + + Q L+L++A++ + + V++ + RG E ALL ++ L + +V+ +P Sbjct: 245 GGIPEQQLLALMDALLAQDVQAVLSQTRQLLERGKEPLALLQNLVALYRDLLLVKTAP 302 >UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 Length = 539 Score = 257 bits (657), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 134/356 (37%), Positives = 205/356 (57%), Gaps = 4/356 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RKWRP TF DV+ Q+ L N + G+ HAYLF+G+RG GKT+ AR+LAK + Sbjct: 2 YKALYRKWRPMTFDDVISQQQTTDTLKNQIMSGKTAHAYLFTGSRGTGKTTCARILAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC CD CR+ + G D++EIDAAS V++ RDL D Y P RG++K+ Sbjct: 62 NCRNMKDGNPCLECDICRDADSGALTDIVEIDAASNNGVDNIRDLRDAAVYTPDRGQYKI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLK +EEPP +VKF+LATT+ K+P TILSRC +F + + E Sbjct: 122 YIIDEVHMLSAGAFNALLKIMEEPPPYVKFILATTEIHKVPATILSRCQRFDFRRIKPED 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L++I +E + ++A+ A+G +RDA+SL D+ G+ ++ VSA G Sbjct: 182 IAARLKYIAEQEELTLTDGGAAMIAKLADGGMRDAVSLLDRCSVGGE-EIDEDVVSAAAG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D L+EA+ + + +++ + L E++ L I ++++SP Sbjct: 241 IAGRDYLFGLLEAINTGDTAKALSITASLYDMSKDIGRLCEELISQLRNIMLIKVSPDTA 300 Query: 303 GNDMAAI--EL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 + + + E+ ++RELA + I + L + A +RR+ EM L++ Sbjct: 301 ESLIVCVAEEMQKLRELADSTELDTIMSHISILQECSSNMNRAMNRRVEFEMALIK 356 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enter... 896 0.0 UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 T... 772 0.0 UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fi... 714 0.0 UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionac... 707 0.0 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 698 0.0 UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pa... 688 0.0 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 683 0.0 UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Ta... 674 0.0 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 668 0.0 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 664 0.0 UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Ta... 660 0.0 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 643 0.0 UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 T... 642 0.0 UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase... 641 0.0 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 638 0.0 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 636 e-180 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 625 e-177 UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 ... 623 e-177 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 621 e-176 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 619 e-175 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 611 e-173 UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Ta... 608 e-172 UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxaloba... 608 e-172 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 606 e-171 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 605 e-171 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 603 e-171 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 602 e-170 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 597 e-169 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 595 e-168 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 594 e-168 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 590 e-167 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 587 e-166 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 581 e-164 UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax... 578 e-163 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 578 e-163 UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Ta... 578 e-163 UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Co... 573 e-161 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 564 e-159 UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase... 560 e-158 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 560 e-158 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 551 e-155 UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pas... 551 e-155 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 544 e-153 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 540 e-152 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 536 e-151 UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibriona... 535 e-150 UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 T... 534 e-150 UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobac... 531 e-149 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 529 e-149 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 529 e-148 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 528 e-148 UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderi... 527 e-148 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 526 e-147 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 523 e-147 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 523 e-147 UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 T... 523 e-147 UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Ta... 522 e-146 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 522 e-146 UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA ... 521 e-146 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 520 e-146 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 520 e-146 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 519 e-145 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 519 e-145 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 518 e-145 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 518 e-145 UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 T... 518 e-145 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 517 e-145 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 516 e-145 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 515 e-144 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 514 e-144 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 514 e-144 UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter s... 514 e-144 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 513 e-144 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 512 e-143 UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 T... 512 e-143 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 511 e-143 UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Ba... 510 e-143 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 509 e-142 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 507 e-142 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 507 e-142 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 506 e-142 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 506 e-141 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 505 e-141 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 505 e-141 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 505 e-141 UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 T... 505 e-141 UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 ... 504 e-141 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 504 e-141 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 504 e-141 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 504 e-141 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 502 e-140 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 502 e-140 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 502 e-140 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 501 e-140 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 501 e-140 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 500 e-140 UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Cox... 500 e-140 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 499 e-139 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 498 e-139 UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Ba... 498 e-139 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 497 e-139 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 497 e-139 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 497 e-139 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 496 e-138 UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 T... 496 e-138 UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymera... 495 e-138 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 495 e-138 UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotro... 494 e-138 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 494 e-138 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 493 e-138 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 493 e-137 UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiob... 493 e-137 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 492 e-137 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 492 e-137 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 492 e-137 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 492 e-137 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 491 e-137 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 491 e-137 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 490 e-137 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 488 e-136 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 488 e-136 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 488 e-136 UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 T... 488 e-136 UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 487 e-136 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 487 e-136 UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 T... 487 e-136 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 486 e-136 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 486 e-136 UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 T... 486 e-135 UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, puta... 486 e-135 UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 T... 486 e-135 UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 ... 486 e-135 UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 T... 485 e-135 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 485 e-135 UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsi... 484 e-135 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 484 e-135 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 484 e-135 UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 T... 483 e-134 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 482 e-134 UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetell... 482 e-134 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 481 e-134 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 481 e-134 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 481 e-134 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 481 e-134 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 480 e-134 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 480 e-134 UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymera... 480 e-134 UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 T... 480 e-134 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 480 e-134 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 480 e-134 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 480 e-134 UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 T... 479 e-133 UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alp... 479 e-133 UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Ta... 479 e-133 UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propion... 479 e-133 UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 T... 479 e-133 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 478 e-133 UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 T... 477 e-133 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 477 e-133 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 477 e-133 UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 ... 477 e-133 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 476 e-133 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 476 e-132 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 476 e-132 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 476 e-132 UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunit... 475 e-132 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 474 e-132 UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Ta... 474 e-132 UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacter... 474 e-132 UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 T... 474 e-132 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 473 e-132 UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=ce... 472 e-131 UniRef50_Q9RKL5 DNA polymerase III subunit gamma n=10 Tax=Strept... 472 e-131 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 472 e-131 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 472 e-131 UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 ... 472 e-131 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 472 e-131 UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 471 e-131 UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 T... 471 e-131 UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteob... 471 e-131 UniRef50_B5ZIA7 DNA polymerase III, subunits gamma and tau n=10 ... 470 e-131 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 470 e-131 UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Ta... 470 e-131 UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Ba... 470 e-131 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 470 e-131 UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Ta... 470 e-130 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 469 e-130 UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau sub... 469 e-130 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 469 e-130 UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Ta... 469 e-130 UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=be... 468 e-130 UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau... 468 e-130 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 467 e-130 UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax... 467 e-130 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 467 e-130 UniRef50_A5V2B2 DNA polymerase III, subunits gamma and tau n=1 T... 467 e-130 UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, puta... 466 e-130 UniRef50_A4GJ98 DNA polymerase III subunits gamma/tau n=1 Tax=un... 466 e-130 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 466 e-130 UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Pl... 466 e-129 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 466 e-129 UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 T... 466 e-129 UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Ta... 466 e-129 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 466 e-129 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 466 e-129 UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunit... 465 e-129 UniRef50_Q0RT17 DNA polymerase III subunit gamma (Partial match)... 465 e-129 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 465 e-129 UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 T... 465 e-129 UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 465 e-129 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 465 e-129 UniRef50_Q98BM8 DNA polymerase III tau n=2 Tax=Mesorhizobium Rep... 465 e-129 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 464 e-129 UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Mi... 463 e-129 UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 T... 463 e-129 UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 T... 463 e-128 UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 T... 462 e-128 UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococca... 462 e-128 UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=The... 462 e-128 UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 T... 461 e-128 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 461 e-128 UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax... 460 e-128 UniRef50_D1A8C7 DNA polymerase III, subunits gamma and tau n=1 T... 460 e-128 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 460 e-127 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 459 e-127 UniRef50_C6QBE2 DNA polymerase III, subunits gamma and tau n=1 T... 459 e-127 UniRef50_Q4JSL3 DNA polymerase III, gamma and tau subunits n=10 ... 459 e-127 UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Ta... 459 e-127 UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits... 459 e-127 UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 T... 459 e-127 UniRef50_C3PJQ2 DNA polymerase III, gamma and tau subunit n=3 Ta... 459 e-127 UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 T... 458 e-127 UniRef50_C3MC56 DNA polymerase III, subunits gamma and tau n=80 ... 458 e-127 UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaul... 458 e-127 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 458 e-127 UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 T... 458 e-127 UniRef50_C6HVG4 DNA polymerase III, subunits gamma and tau n=1 T... 457 e-127 UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau ... 457 e-127 UniRef50_C3J7N6 DNA polymerase III, subunit gamma and tau n=2 Ta... 457 e-127 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 456 e-126 UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 T... 455 e-126 UniRef50_Q022F8 DNA polymerase III, subunits gamma and tau n=1 T... 455 e-126 UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella... 455 e-126 UniRef50_Q89A95 DNA polymerase III subunit gamma n=42 Tax=Entero... 455 e-126 UniRef50_B2ICM3 DNA polymerase III, subunits gamma and tau n=3 T... 454 e-126 UniRef50_D2BCW3 DNA-directed DNA polymerase n=1 Tax=Streptospora... 454 e-126 UniRef50_Q1GKB7 DNA polymerase III subunits gamma and tau n=4 Ta... 453 e-125 UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=L... 452 e-125 UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 T... 452 e-125 UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Me... 452 e-125 Sequences not found previously or not previously below threshold: >UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enterobacteriaceae RepID=DPO3X_ECOLI Length = 643 Score = 896 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 643/643 (100%), Positives = 643/643 (100%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM Sbjct: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA Sbjct: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH Sbjct: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA Sbjct: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA Sbjct: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL Sbjct: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI Sbjct: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 >UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 Tax=Enterobacteriaceae RepID=D0ZED4_EDWTE Length = 689 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 460/655 (70%), Positives = 530/655 (80%), Gaps = 15/655 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 38 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 97 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDL+EIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 98 GLNCETGITATPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF 157 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQFHL+ALD Sbjct: 158 KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDH 217 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR QLE I + E + EPRALQLLARAAEGS+RDALSLTDQAIA G GQ++ AVS M Sbjct: 218 EQIRAQLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLTDQAIAMGQGQITADAVSQM 277 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDD+Q L+L+EA+ A+G VMA + +AA RG++WE LLVEML LLHR+AM+QL P+ Sbjct: 278 LGTLDDEQPLALIEALTAADGTLVMARVEQAAGRGVDWENLLVEMLALLHRVAMLQLLPS 337 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + AA+E R+RELAR +PP D+QL+YQ LL GRKEL +APDRRMGVEMTLLRALAFH Sbjct: 338 ALDSQFAAVEPRLRELARMLPPADLQLFYQILLNGRKELAFAPDRRMGVEMTLLRALAFH 397 Query: 361 PRM----PLPEPEVPRQSFAPVAPTAV------MTPTQVPPQPQSAPQQAPTVPLPETTS 410 P+ P P P + P P V +P VPP + PQ A V PE+T+ Sbjct: 398 PKAVIAEPSPAPSAAQGGDIPAVPATVAQRVAPPSPATVPPTVSAPPQAASAV--PESTA 455 Query: 411 QVLAARQQL-QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 Q+L AR +L Q+ G ++ KKSEPAA RA+P + +ALERLAS+++R Q + + E+A Sbjct: 456 QLLQARSRLRQKAAGGSEPKKSEPAAPQRAQPAS-SALERLASISERGQQKIASAEQEQA 514 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 +KEAYRWKA +++K TPKAL+ ALEHEKTPELAA LA E++ RD WA ++SQ Sbjct: 515 STRKEAYRWKAQNRPVEEKAPKTTPKALRSALEHEKTPELAAHLAQESLTRDAWAQELSQ 574 Query: 530 LSLPKLVEQVALNAWKEES-DNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 L LPKLV+Q+ALNA++E + + +V LHLRS+QRHLN+ A+Q L +ALS G V L+I Sbjct: 575 LRLPKLVQQLALNAFREPAPEGSVLLHLRSAQRHLNSASARQTLEQALSDHYGHPVALSI 634 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 VEDD+P RTPLEWRQAIYEE+LAQAR SI AD NIQTLRR FDAELDEESIRP+ Sbjct: 635 VEDDDPQRRTPLEWRQAIYEERLAQARASIAADGNIQTLRRLFDAELDEESIRPV 689 >UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fischeri RepID=B5FFM6_VIBFM Length = 709 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 346/712 (48%), Positives = 442/712 (62%), Gaps = 72/712 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ E RAL L+A AA+GS+RDALSLTDQAIA G+G V+ + VSAM Sbjct: 181 DQIHEQLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M +N+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ L+ + P ++QL+YQ +L RK+LP AP+ R G EM LLR +AF Sbjct: 301 TLDKTQPDAE-RIELLSTQLSPQEVQLFYQIVLQSRKDLPLAPNERTGAEMMLLRMVAFR 359 Query: 361 P-----------RMPLPEPEV-----PRQSFAPVAPTAVM-------------------- 384 P +P EP+ Q AP P V Sbjct: 360 PVHAQALEAQPIAVPSTEPQAINTAPRVQQQAPSVPANVAPQAQRPMTSQQRPTMQQQTQ 419 Query: 385 ---TPTQVPP--------------------QPQSAPQQA-----PTVPLPETTSQVLAAR 416 P VPP APQQ+ P P S +L R Sbjct: 420 QGHAPANVPPMHSEQPPMYDAPPMGTPSGESASQAPQQSSSAQPPMQETPAPRSGLLGVR 479 Query: 417 QQLQRVQGA--TKAKKSEPAAATRARPVNNAALERLAS---VTDRVQARPVPSALEKAPA 471 QL+ + S+ A+A + ++ LER+A + R Q + ++ + Sbjct: 480 NQLRSAKNNLTNTGTGSKKASAASDKKKTSSVLERIAEKQHLAPRAQVSQIGNSATQEKK 539 Query: 472 KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 +E YRWK+T P M++ TP LK+ALEHEKTPE+ L E+ ++D W+A L+ Sbjct: 540 PEEPYRWKSTQPEMKKVVSDVTPTKLKQALEHEKTPEMVKLLVEESSKQDTWSALAMSLT 599 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 LPKLV+Q+ LN+ E DN + LHLR++Q HLN A + + +AL+ V +TI Sbjct: 600 LPKLVQQLVLNSAFVEQDNQIKLHLRAAQSHLNGDKANELITQALTQTLNREVTITIDIS 659 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 D TPLE R+ +Y+ KL A +S+ D ++ + F AE+D+ES+RPI Sbjct: 660 DEG--TTPLELREQMYQTKLQTAYQSLQQDPHVNFFIQRFGAEMDQESVRPI 709 >UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionaceae RepID=B6EJ42_ALISL Length = 714 Score = 707 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 337/717 (47%), Positives = 440/717 (61%), Gaps = 77/717 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKF+LATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ + RAL L+A AA+GS+RDALSLTDQAIA G+G V+ VS M Sbjct: 181 DQIHAQLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAIALGNGNVTADIVSMM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M+ IN+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ L+ + P ++QL+YQ L R +LP AP + GVEM LLR +AF Sbjct: 301 TLDKTQPDAE-RIELLSGQLSPQEVQLFYQIALQSRNDLPLAPTEKTGVEMMLLRMVAFR 359 Query: 361 P-----------RMPLPEPEVPRQSFAPVAPTAVMT------------------------ 385 P +P EP + AP + + Sbjct: 360 PVHAQAIEALPIAVPSMEPAAVNVAPQQPAPASRVQQVIASAPNAEVPVAPKPMQPQAVS 419 Query: 386 -----PTQVPPQPQSAP---------------------------QQAPTVPLPETTSQVL 413 P Q SAP Q P P+ S +L Sbjct: 420 QTVYSPVSNSQQSSSAPLDSTEAQPPVYDAPPMGESSQSDSAPVQNIPQEPIATPRSGLL 479 Query: 414 AARQQLQRVQGA----TKAKKSEPAAATRARPVNNAALERLAS---VTDRVQARPVPSAL 466 R QL+ + T + +A + ++ LER+A + R Q + +++ Sbjct: 480 GVRNQLRSAKNNLSNTTTGTSPKKGSAASDKKKTSSVLERIAEKQHLAPRTQVSQLGTSV 539 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 + +E YRWKA+ P +++ TP LK+ALEHEKTPE+ +L E +++D W+A Sbjct: 540 SQEKKPEEPYRWKASQPEVKKVVSDITPTKLKQALEHEKTPEMVQELVDETVKQDTWSAL 599 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 L+LPKLV+Q+ LN+ EE D+ V LHLRS+Q HL N A + +++ALS ++L Sbjct: 600 AMSLALPKLVQQLVLNSSFEEHDDQVSLHLRSAQSHLINDKAHELVSQALSSALNKEIKL 659 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I D + +PLE R+ +Y+ KL A +S+ D ++ + + AE+D+ES+RPI Sbjct: 660 NI--DISAEGTSPLELREQMYQTKLQTAYQSLQQDPHVNFFMQRYGAEIDQESVRPI 714 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 334/705 (47%), Positives = 440/705 (62%), Gaps = 68/705 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F V+GQEH+LTALANGL R+HHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQNFHQVIGQEHILTALANGLKENRLHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE G F+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCIHGVTAEPCGECEHCKAIENGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L +IL +E I EP AL +A+AA+GS+RD+LSLTDQAIA + + V+ M Sbjct: 181 QQIAQHLANILTQEKIPFEPTALGKIAKAAQGSVRDSLSLTDQAIAMSNADIRVDVVNIM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+Q + ++ A+ + NGE++M I A G +W+ LL+E+ LH+IAM+QL P Sbjct: 241 LGLLDDNQPIEILYALHQGNGEKLMQGIQAVADNGADWDELLIEVGEALHQIAMLQLLPN 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + E ++ LA+ I P +IQ +YQ + +GRKEL +AP+RR+G EMTLLRALAFH Sbjct: 301 RIDE-----ESQLGFLAKHISPENIQFFYQIVTMGRKELAFAPNRRIGAEMTLLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQP-----------------QSAPQQAPTV 403 P+ EP Q + V +A P + + PQ+ + Sbjct: 356 PKFSRAEP-AEHQVNSTVQDSARAHPEKESAVKKTINLVEMPVYNQHLRVSATPQREQSP 414 Query: 404 P---LPETTSQVLAARQQLQRVQGATKAKKS----------EPAAATRARPV-------- 442 P ++TS L A Q++R++ + ++ S +PA PV Sbjct: 415 PGNLSGKSTSNALNALAQIERLRASVRSAASTEEKTGFEQPQPAVQAHELPVVSMPQKER 474 Query: 443 -NNAALERLASVTDRVQARPVPSALEKAPAK--------------------KEAYRWKAT 481 ++RLAS+ + Q P+ K+ +K E YRW+ Sbjct: 475 PQTDLIDRLASLAQQAQDNLNPAVKRKSVSKPVSDSTQETENEDDSDDANLAETYRWEWI 534 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP--KLVEQV 539 P M + E V P +K+A+ EKTPEL K+ A A ERD W V L L KLV+Q+ Sbjct: 535 NPEMAEAENVIRPSEIKQAILKEKTPELVKKVIALAEERDDWTKTVEHLGLDHLKLVKQI 594 Query: 540 ALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 ALN+ ++D+ + L LRS+Q+HL A + L AL + G + L I +D+ T Sbjct: 595 ALNSVILAQTDSEIVLGLRSNQKHLQRESAIEALQAALKVYYGKDLRLKIELNDDERRPT 654 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 PL++R+ IY E +AR+ + AD ++ L++ FDA LD +SIRP+ Sbjct: 655 PLDYRRQIYHELSERARQDLQADKKVKLLQQAFDAHLDLDSIRPV 699 >UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pasteurellaceae RepID=DPO3X_HAEIN Length = 688 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 325/694 (46%), Positives = 431/694 (62%), Gaps = 57/694 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQEH++TALANGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TATPCG C+NC+ IEQG F+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCVHGVTATPCGECENCKAIEQGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLKALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L HIL +E+I E AL LA+AA+GS+RD+LSLTDQAIA GD QV+ VS M Sbjct: 181 TQISQHLAHILTQENIPFEDPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+ ++ ++ A+ + NGE +M + A +W+ LL E LH+IA++QL P Sbjct: 241 LGLLDDNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ LA+ I P ++Q +YQ ++ GRK+L AP+RR+G EMTLLRALAFH Sbjct: 301 KSSDNNEHFSF----LAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLLRALAFH 356 Query: 361 PR----MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS------ 410 P+ +P + P A VP QS + A + P TS Sbjct: 357 PKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSI-KSAYSQAKPNKTSIPNLAS 415 Query: 411 -QVLAARQQLQRVQGATKAKKSEPAAATRARPVNN-------AALERLASVTDRVQARPV 462 L A + L +++ + + + A + +++ + +++ ++ R P Sbjct: 416 LSALDALEHLTQLENQERQEHKAESLAVVSETLHHIQELDEEKSHKKMTALPVREMTEPK 475 Query: 463 PSALEK---------APAKK-----------------------EAYRWKATTPVMQQKEV 490 P +EK AP K + YRW+ + P + + + Sbjct: 476 PKHIEKPTLPSNAAQAPQKNSTEENSSDDNVEIAQDEQEILSADTYRWEWSNPELAKADT 535 Query: 491 VATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESD 549 P +K+A+ + TPEL K+ + ++D WA V + L +++ALN + + ++D Sbjct: 536 GVCPSDIKQAILKDITPELRLKIITQTQQQDQWADIVERSGLTGFSKELALNCFLQSKTD 595 Query: 550 NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEE 609 + + L L S + HL + + LAEALS L+G + LTI DD+ V TP+E+R+ IY+ Sbjct: 596 DEINLGLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDS-NVTTPIEYRRNIYQA 654 Query: 610 KLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +A+ + D+ +Q L FDA+LD ESIRP+ Sbjct: 655 LREKAQNELQKDSKLQILLNEFDAKLDVESIRPV 688 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 292/688 (42%), Positives = 398/688 (57%), Gaps = 49/688 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF +++GQEHVL AL N L GR+HHAYLF+GTRGVGKTSIAR+LAK Sbjct: 1 MSYQVLARKWRPRTFREMIGQEHVLRALINALDHGRLHHAYLFTGTRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+++ PCG C C EI +GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCETGVSSEPCGECSACVEISEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 KIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L HIL +E I E AL LAR+A+GS+RDALSLTDQ+I+ G G+VS V++M Sbjct: 181 ERIVGHLSHILEKEVIPFEESALWQLARSADGSMRDALSLTDQSISFGGGKVSEDEVASM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +LV A++ +G +++ + + A +++ L +++ LLHRIA+ Q P Sbjct: 241 LGTIDHKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITLLHRIAIAQALPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N ++ E A + P D+QL+YQT LIGR++L +PD R G EMTLLR LAF Sbjct: 301 ALDNSYGD-RTQILEFASKLAPEDVQLFYQTALIGRRDLSLSPDPRSGFEMTLLRMLAFK 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQV-------------------PPQPQSAPQQ-A 400 P+ P Q+ AP + V P Q+AP+Q Sbjct: 360 PQGVADVPTQRLQAQPASAPASSSDVASVAAPAAPTAQAAPQPSSNVEPAPAQAAPEQTE 419 Query: 401 PTVPLPETTSQVLAARQQL----------------QRVQGATKAKKSEPAAATRARPVNN 444 P+ P + Q A + + Q K ++EP A P + Sbjct: 420 PSPPAQTSPPQQNVAPNTVEDNSPPADYYDNMPPYEEAQEPVKKPQAEPQQAQAEVPASE 479 Query: 445 AA----LERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKA 500 A + + + + QA P APAK A + + KE ++ P + Sbjct: 480 PAPLGPMHTVVTAAESTQAVAEPEVNTSAPAKTPADALREQVKAIVGKEGISAPPKPAQQ 539 Query: 501 LEHEK------TPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK-EESDNAVC 553 L++ P + ++ E + W + +QL++ +++ A N DN + Sbjct: 540 LKNTPAAPINAAPVVTTPISLEELTPSHWVSVYNQLNVKGILQSTAANTVLIGREDNHLD 599 Query: 554 LHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA-VRTPLEWRQAIYEEKLA 612 L + L + +L+ LS G ++ I + P + TP + I +EK Sbjct: 600 FALDEQKSSLFDPSHSDRLSALLSDYFGVPIKAAIHLQNLPGDLETPAAYAIRIDQEKRV 659 Query: 613 QARESIIADNNIQTLRRFFDAELDEESI 640 A +++ D +QTL++ F+A L EE++ Sbjct: 660 AAIQNMYDDPVVQTLQQQFNATLVEETV 687 >UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Tax=Actinobacillus minor RepID=C5S1I5_9PAST Length = 698 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 340/703 (48%), Positives = 445/703 (63%), Gaps = 75/703 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGITATPCGECANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI H LE IL E I +E A++ LA+AAEGS+RD+LSLTDQAIA + V+ AVS M Sbjct: 181 TQIAHHLEFILKAEQIPYETAAIEKLAKAAEGSIRDSLSLTDQAIAVTNANVTLSAVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L L+ A+ A+GE+VMA+I A +G++W LL ++ +LH+IAM+QL + Sbjct: 241 LGLIDDHQPLELIMALANADGEKVMAVIQNVAEKGVDWNQLLNDVAEVLHQIAMLQLVKS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + A + LA+ + P DIQ +YQ +L+G+KELP AP++R GVEMT LRALAFH Sbjct: 301 AEQEESA-----IHFLAKQMAPEDIQFFYQVILMGKKELPLAPEQRSGVEMTFLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ--------------------- 399 P+ E + AP + P Q+ QP Q Sbjct: 356 PK----RTEAINLNVAPQQTQNSVAPQQIVQQPTRTAQDNIAQLRERLAKESSSTQAVQN 411 Query: 400 --------------APTVPLPETTSQ----------VLAARQQLQRVQG---ATKAKKSE 432 +P V P +T + AR+QLQ Q T+ KK E Sbjct: 412 NEHFAKVSQNATAYSPNVNAPTSTETPTQGVSAALVAMQARKQLQETQAQLDQTEKKKPE 471 Query: 433 PA-----------AATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 A + R +N A ++ + ++ +PV +A P E YRW Sbjct: 472 LVIPKPINTNKQPANLQERFMNLAVAQQQQTTREKTVTKPVATA---KPTNDEDYRWTWL 528 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL 541 P ++ ++ A P +K+A+ E+TPEL K + + E+D W V++L+L L Q+AL Sbjct: 529 NPELENQDESAKPSDIKRAILQERTPELVEKTISLSCEQDKWCKLVNELALGGLSRQLAL 588 Query: 542 NAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 N++ + +N + L L+ + HL+N ++Q LA AL KG T +LT ++ +TPL Sbjct: 589 NSYLSDTQNNELHLVLKPAMAHLDNLESRQSLATALLE-KGFTYQLT--LGESAENKTPL 645 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E R+AI+E+ A+ ++ +D + LR+ FDAE+DE +IR + Sbjct: 646 EIRRAIFEQLTVDAKNALFSDEKLMLLRQAFDAEIDESTIRAV 688 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 288/663 (43%), Positives = 367/663 (55%), Gaps = 53/663 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF D+VGQEHVL AL + L R+HHAYLF+GTRGVGKT+I RLLA+ Sbjct: 1 MSYQVLARKWRPRTFEDMVGQEHVLQALIHALEHQRLHHAYLFTGTRGVGKTTIGRLLAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT PCG CD+C+EI + RFVDLIEIDAASRT V+D R+L DNVQYAP RGR+ Sbjct: 61 CLNCETGITPNPCGECDSCKEILENRFVDLIEIDAASRTGVDDMRELTDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHML+ SFNA LKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L+H+L EE I E AL LLARAA+GS+RDALSLTDQAIA G+ ++ VS M Sbjct: 181 EHIVGHLKHVLTEEQIPFEDPALWLLARAADGSMRDALSLTDQAIAFGNENLAASDVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +V A+VE +G +++ IN + ++ +L +ML L HR+ M Q+ P Sbjct: 241 LGTIDQRDIQRIVNALVERDGPGLLSEINRISDFAPDYGVILSDMLSLFHRVTMEQVVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N M +++ELAR + D QL+YQT LIGRK+L PD RMG EMTLLR LAF Sbjct: 301 SADNAMGDA-AQVQELARRLSAEDAQLFYQTALIGRKDLSVTPDARMGFEMTLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P EP P + +P+ P Q Sbjct: 360 PGTDRREP--------PALVSGNSNNGTAESEPEPGPVS------------------QTA 393 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Q A + EPA P A LE + D P P E + E+ W+ Sbjct: 394 STQAVAAAPQPEPAPQPVPSPEPVAELEPQPPMVD----DPPPWEPEDYGVQAESPEWQE 449 Query: 481 TTP-----------VMQQKEVVATPKALKKALEHEKT--------PELAAKLAAEAIERD 521 P + + E P + ++ E+ PELA + + D Sbjct: 450 PVPQSDSSIEPDASAISEPESAPEPVSASDPVQSEQNAGQALVNEPELAPAEPEQPVTAD 509 Query: 522 P--WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 W L + + +A + AV L L L N ++K+ AL Sbjct: 510 GFVWERDFRSLGITGMPGNLASYSSMRMEGQAVVLTLDEGHARLLNARHEEKILAALRSR 569 Query: 580 KGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 G +L I E P + TP + + + A ESI D ++++ F+ + EES Sbjct: 570 FGDATQLKI-EQGVPGLHTPAAFEERQRAARQKAAEESIRQDPLVKSIVERFEGRVVEES 628 Query: 640 IRP 642 IRP Sbjct: 629 IRP 631 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 303/735 (41%), Positives = 392/735 (53%), Gaps = 98/735 (13%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IAR++AK Sbjct: 1 MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+TPCG C C+EI++GRFVDLIEIDAASRTKVEDTR+LLDNVQYAP+RGRF Sbjct: 61 CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP +VKF+LATTDPQKLP TILSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L H+L E++ E AL LL RAA+GS+RDA+SLTDQAIA G+G+V V AM Sbjct: 181 ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD Q ++ A++E + V+ + A +G +W +L E+L +LHR+A+ Q P Sbjct: 241 LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N + R+ LA+ +P D+Q YYQ LIGR++LP APD R G EM LLR LAF Sbjct: 301 GVDNGHGDRD-RVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFR 359 Query: 361 PR-------------------MPLPEPEVPRQSFAPVAPTAVMTPTQVPP---------- 391 P + + A VAP P P Sbjct: 360 PADNYDAPRQPLKPVGISQATVDSRKAVADATPVASVAPAVSTAPVMAAPDPAFEALPPA 419 Query: 392 -----------QPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRAR 440 +P + P+ P PE +V + + A K +S P T A Sbjct: 420 AAPMPTAAVRAEPAAQPESQP-QAQPEPVEEVDLPWNEPKSPV-AEKNAESAPDTGTVAE 477 Query: 441 PVNNAALERLASVTDRV------QARPVPSALEKAPAKKEAYRWKATTPVM-----QQKE 489 PV LE ++ D A PVP A E PA+ + TP M Sbjct: 478 PVAEPVLETVSEQPDLTPMPTPAPASPVPDAPEAEPAQ--PVAEQQVTPAMLEAIPDSAY 535 Query: 490 VVATPKALKK---------------------------------ALEHEKTPELAAKLAAE 516 + P ++ L HE EL A Sbjct: 536 LSMNPDSMSSNSGPMGRDDEPPADDDYVEPDIDIDPASYSYLDELAHESVVELEAVEPEP 595 Query: 517 AIERD-------PWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGA 568 A W +L + + +A N ++ LHL + L N Sbjct: 596 APAAKPATGLAADWLEVFPKLPISGMTGSIAANCTLMAVDGDSWLLHLDPAHSALFNSTQ 655 Query: 569 QQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLR 628 Q++L +AL+ G T+ L+I E P TP + + E+ QA SI AD IQ + Sbjct: 656 QRRLNDALNQYHGRTINLSI-ELIKPEQETPAQAASRLRAERQRQAEASIQADPYIQQML 714 Query: 629 RFFDAELDEESIRPI 643 + F A + E++I+P+ Sbjct: 715 QQFGAVIREDTIQPV 729 >UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Tax=Pasteurellaceae RepID=B8F323_HAEPS Length = 670 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 329/678 (48%), Positives = 437/678 (64%), Gaps = 45/678 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGI+A PCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGISADPCGQCANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+AL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ LE IL +E I +E AL LA+AA+GS+RDALSLTDQAIA + ++ VS M Sbjct: 181 SQIQQHLEFILTQEQIPYELSALAKLAKAAQGSIRDALSLTDQAIAVSNVNITLPIVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L LV+A+ A+GE+ MA+I A +G++W+ L + LH+IAM+QL Sbjct: 241 LGLIDDHQPLELVQALANADGEKAMAVIQSVAEKGVDWQQLFSDTAETLHQIAMLQLLKH 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + LA+ I P D+Q +YQ +L G+KELP+AP++R GVEMT+LRALAFH Sbjct: 301 AHQEETP-----LHFLAKQISPEDVQFFYQVMLTGKKELPFAPEQRSGVEMTILRALAFH 355 Query: 361 PR------------------------MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA 396 P+ L E +Q+ A T + Q + S Sbjct: 356 PKNMATTTTVATPTTPVAPVQSPNSISQLRERLAQQQNSAQTVTTQAVNTEQHFAKNLSQ 415 Query: 397 PQQAPTVPLPETTSQVLAARQQLQRV----QGATKAKKSEPAAATRARPVNNAALERLAS 452 P +PT E+ S L A Q Q++ + + KKS+ + VN ++++ Sbjct: 416 PTASPTETNTESISPALKAMQARQQLKAKQEQQDEKKKSDLTPIQPPKTVNKKSVQQ--G 473 Query: 453 VTDRVQARPVPSALEKAPAKK------EAYRWKATTPVMQQKEVVATPKALKKALEHEKT 506 + + V A+ +E+ P K E YRW P ++ +E P +K+A+ E+T Sbjct: 474 LMNLVTAQDQRQQIEETPQKNIASQNDEDYRWTWLNPELENQEEAPKPSEIKQAILQERT 533 Query: 507 PELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESDNAVCLHLRSSQRHLNN 565 PEL K ERD W+ V+ L L + Q+ALN++ E ++N + L L + HLN+ Sbjct: 534 PELVKKTIELGCERDKWSRIVNSLKLGGVSRQLALNSYLESHNNNHLLLVLNPTMAHLNS 593 Query: 566 RGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ 625 A Q L ALS +G + E+ I E D +TPLE R+ I+E+ +A++++ AD ++ Sbjct: 594 NEATQSLYNALSQ-QGFSSEMRIGESD--EFQTPLEIRRVIFEQLTQEAKQALQADKKLK 650 Query: 626 TLRRFFDAELDEESIRPI 643 L++ FDA++DE +IR + Sbjct: 651 LLQQAFDAQMDEATIRAV 668 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 282/675 (41%), Positives = 380/675 (56%), Gaps = 40/675 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IARLLAK Sbjct: 1 MSYQVLARKWRPGTFDEMVGQVHVLKALVNALDQERLHHAYLFTGTRGVGKTTIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGRF Sbjct: 61 SLNCEQGVSSKPCGQCASCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HIL E + + +L +A A+GS+RDALSLTDQAIA G G ++ Q V+AM Sbjct: 181 EHIVQHLNHILTVEQVPFDEPSLWAIAEGAQGSMRDALSLTDQAIAFGHGALAEQEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+LV A+++ + + ++A+++E +++ LL E++ LHR+A+ Q P+ Sbjct: 241 LGTVDLKRVLNLVRALLQKDADGLLAMVSELDEHTPDYQTLLTELMSTLHRVAIAQAVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N + M LA+ DIQLYYQ + EL AP R G EMTLLR LAF Sbjct: 301 AISNHKGDRDAIM-ALAKAGYAEDIQLYYQIAGKSKGELSLAPSERAGFEMTLLRMLAFS 359 Query: 361 ----------PRMPLPEPEVPRQSFAPVAPT-AVMTPTQVPPQPQSAPQQAPTVPLPETT 409 P + PE + S APV P + P +P + AP P+ ETT Sbjct: 360 QTPPSSIDTLPPLTTQAPETTQPSAAPVKPAVSTPEPVSIPASEEVAPDVGPS----ETT 415 Query: 410 SQVLAARQQLQRVQGATKAKKSE----------PAAATRARPVNNAALERLASVTDRVQA 459 S+ + + + K +E PA+ V E VQ Sbjct: 416 SEAAVPSEPVNAAETPVKKTPAESVDAAEVLTQPASQPEPATVPEPVSEPEPEPEITVQE 475 Query: 460 RPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEH--EKTPELAAKLAAEA 517 P P+ + E + ++ +++ P + E P+ AA+L+ A Sbjct: 476 DPHPAGAVDTTSMLEPVAEQPPIETPTEENLLSEPDSASDPESKVVETEPQTAAELSDVA 535 Query: 518 IERDP---------WAAQVSQLSLPKLVEQV-ALNAWKEESDNAVCLHLRSSQRHLNNRG 567 D W + +L L + + + A + W+ + + L + + R + N Sbjct: 536 TWPDTDLDADPVFWWQVTLHRLGLSGMTKTLFAHSQWRGYENGQLSLVISPNYRKIMNDS 595 Query: 568 AQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTL 627 QQ L +A++ LT +TP W + + +A + + AD ++TL Sbjct: 596 HQQYLLQAITDWLPDCQSLTYEFG--AVDKTPQLWLDQLVQAANDRAYQHLKADAFVETL 653 Query: 628 RRFFDAELDEESIRP 642 F EL +ES P Sbjct: 654 INEFKGELIQESAVP 668 >UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 Tax=Candidatus Blochmannia RepID=Q493A4_BLOPB Length = 698 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 282/689 (40%), Positives = 417/689 (60%), Gaps = 48/689 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+D+VGQEH++ A+ + SL +IHHAY+ SGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPKKFSDIVGQEHIIQAITHTFSLNKIHHAYILSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G T T CG C+NC++IE G F+DLIEIDAASRTKVEDTR+ LDNVQY P+RGRF Sbjct: 61 GLNCEQGTTYTMCGQCNNCKDIELGCFIDLIEIDAASRTKVEDTREFLDNVQYMPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKF+L TT+ QKLP TILSRCLQF+LK L++ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPTHVKFILVTTEYQKLPETILSRCLQFYLKPLNI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +I ++E+I E AL+ LA A++GS+RDALSL +QAI G+ +++ ++ M Sbjct: 181 SQIINQLTYIFHKENINIETSALESLAYASKGSMRDALSLAEQAIVLGNNEITNNVINNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + L L+E++++ + +M I G+ W+ + E+L +L +IA+ Q Sbjct: 241 FGISNIEHPLCLIESLIDEDIHNIMHQIENLTVLGVHWDYVFNEILTILQKIAIGQFLSN 300 Query: 301 AL----GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 ++ N I RMR L+ I P ++QLYYQ L+GR+ELPYAP RMG+EMT+LRA Sbjct: 301 SVQKEDNNVTQHINQRMRRLSNRITPENVQLYYQIFLLGRRELPYAPSHRMGIEMTMLRA 360 Query: 357 LAFHPRMPLP---------EPEVPRQSFAPVAPTAVMTPT---------QVPPQPQSAPQ 398 LAF P + + + ++S + T Q Q + Sbjct: 361 LAFRPDVDIANKKNGNGDDNDHILKKSVCSNNNVEINTNDTQHIATDLFQKKNHNQGSKN 420 Query: 399 QAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTD--- 455 T L +T + +L ++ + TK K S+ ++ R + + LE + + Sbjct: 421 VLNTEKLKKTNNILLLNFKKSELNSDNTKPKISKSVSSRDTRDITSTILEARSKLLQYKE 480 Query: 456 --------------RVQARPVPSALEKAPA------KKEAYRWKATTPVMQQKEVVATPK 495 + + LE+ + K + R++ + + Sbjct: 481 RDKLNVIEKKSNLTLESQKKIKDILERFASINTIILKNSSDRFEKINKDLSGYLEFSNNS 540 Query: 496 ALKKALE--HEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAV 552 K+ L H+ P+ ++ +AI + W +Q+ +LSLPKL +++ +N+WKE+ S + + Sbjct: 541 NNKENLHRNHQNMPDFIKEILQKAINNNLWISQIYRLSLPKLAKKLVMNSWKEKISSDEI 600 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 CLH+RS +HLN+ + + ++LS G ++L I +DDN A++TP+E +Y+EK++ Sbjct: 601 CLHVRSDYQHLNSTELRNIIQKSLSNNIGIAIKLHIKKDDNYAIKTPMEHLYTLYKEKIS 660 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIR 641 ++ +D ++ ++ FFDAE+DE I+ Sbjct: 661 LIKKEFSSDPYVKMIKSFFDAEIDENDIQ 689 >UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q0A8H8_ALHEH Length = 648 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 279/647 (43%), Positives = 361/647 (55%), Gaps = 12/647 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+++ GQEHVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MAYQVLARKWRPRTFSEMAGQEHVLRALVNALEQQRLHHAYLFTGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TA PCG CD CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVTAEPCGTCDACRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLPG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L ++ +E +A EP+AL L +AA+GS+RDALSL DQAIA G G V V AM Sbjct: 181 GLVADYLHTVVEQEGVAAEPQALARLGQAAKGSMRDALSLLDQAIAFGAGAVREDEVCAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D L +EA+ +G ++A+ + R ++ L E+L LH++A++Q+ P Sbjct: 241 LGTIDRGFVLEALEALAAGDGRALLAVTARMSERAPDFSDALDELLHCLHQLALLQVVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + R+R+LA +P D+QLYYQ L GR++LP AP+ R G EM LLR LAF Sbjct: 301 ALPAGDPDAD-RLRDLAARLPAEDVQLYYQIALNGRRDLPLAPEGRTGFEMVLLRMLAFQ 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTP----TQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 P A +P +P+ +PT + A Sbjct: 360 PVTGTAVAATGGAGADAPPAAAAGSPRSQAAPKATRPRREAHPSPTPTERAEPAAAPAGG 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 G + A R + V + E A + Sbjct: 420 SPPPEQGGGLGGYREALMRAARGQAVEPDGPAPAPADPSAAAEPAPAGGREPAAGLTDPP 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 W PV ++ P + E PE A A I + W + L L + Sbjct: 480 AWAEGPPVSDEEP----PPIGAQPAAAETAPETTAPDDA-GITPETWPWRARDLPLDGAL 534 Query: 537 EQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 Q A + W E + V L L S L + +LA+ L G V L + ++P Sbjct: 535 RQFAAHCEWVGEEEGRVILRLDSGHGMLRTPALEAELAQVLGDYLGRAVRLDVRL-ESPH 593 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP + E+L ARES+ D N+ L + F AEL +++RP Sbjct: 594 RDTPATVARRERAERLRAARESLENDPNVARLHQRFGAELLPDTVRP 640 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 270/657 (41%), Positives = 371/657 (56%), Gaps = 25/657 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FA++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPRIFAEMAGQQHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GRF+DLIE+DAASRT V+D R+LLDNVQYAP+RGR+ Sbjct: 61 CLNCEVGVSSVPCGECSSCTEIGEGRFIDLIEVDAASRTGVDDMRELLDNVQYAPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+ SF ALLKTLEEPP HVKFL ATTDPQKLP+T+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPITVLSRCLQFNLKNLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L+ +L EE + E AL LARAA+GS+RDALSLTDQAI G GQV+ VSAM Sbjct: 181 ERITEHLQFVLGEEQVPFEEAALWSLARAADGSMRDALSLTDQAIGHGGGQVNEGEVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + + +A++ +G ++A I A + +++A L ++L + H++A+VQ P Sbjct: 241 LGTIERSYVVDICQALISGSGTELLAAIGRMAEQAPDYDAALTDILSVWHQVAIVQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +A + LA + D QL+YQ L+GRK+L +PD + G EM +LRALAF Sbjct: 301 ALDKGVANY-TELLALAAAVSREDTQLFYQICLLGRKDLQLSPDAKSGFEMVMLRALAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ P+ A AV P +V P + + V+ R L+ Sbjct: 360 PQTSAQVGSGPKAVAKAQASAAVAPPLEVEPSGKKPEA---------VVTAVVDDRPPLE 410 Query: 421 RVQGATKAKKSEPAA---ATRARPVNNAALERLASVTDRVQARPVPSALE---KAPAKKE 474 A S P + A PV A + S + Q P+ + +A K Sbjct: 411 PAVEAVAEAVSAPESTVKPVTAAPVEPTAQLVVESPVEVYQKSVQPTGYDGVQEAVQKTV 470 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTP-------ELAAKLAAEAIERDPWAAQV 527 + + T + + E+TP A + E D W Sbjct: 471 DGAVGQPIEETVDETIKETIEEASEKPSQERTPLQTPEAAPAPAPIPLERFTPDNWIQLR 530 Query: 528 SQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 QLS+ + ++A + + S + + S L + Q++ +EALS V + Sbjct: 531 RQLSIGASLGEIASHCLYLGRSGQQLNFLIDSDHNSLYDEPHQEQFSEALSDYFQQPVTV 590 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I TP E+L +A +S+ D + ++ FD ELDE S+RPI Sbjct: 591 DITLG-VAEKETPRAATTREKAERLVEAVDSLNQDPAVVKFKQLFDGELDERSVRPI 646 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 302/684 (44%), Positives = 402/684 (58%), Gaps = 46/684 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITATPCG C C EIEQGRFVDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKALSN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL ++L++E + + AL LLAR+A GS+RDALSLTDQAIA G G VS +V M Sbjct: 181 DDITQQLSYVLSQEQVQADSEALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +L+E+++E + E VM ++ + + ++LVE+ LLH++A+VQ P+ Sbjct: 241 LGNVPVADIAALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + ++ L R +P IQ++Y+T+L GR+E YA D R G+EMTLLR L F Sbjct: 301 AAN--VFENSDVLKPLLRRMPAELIQVFYRTVLEGRREQAYAIDARSGLEMTLLRLLCFR 358 Query: 361 P----------------RMPLPEPEVPRQ--------SFAPVAPTAVMTPT-----QVPP 391 P MP + P Q S A V P A P P Sbjct: 359 PAEKGDYNITEPDSSAVDMPESKLTAPAQEVTETEAGSVAEVTPQAGPEPQPEAELSEPM 418 Query: 392 QPQSAPQQAPTV---PLPETTSQVLAARQQLQRVQGATKAKK-SEPAAATRARPVNNAAL 447 QP + + P P+ + ++ A K++ EP A A P A Sbjct: 419 QPSYSEHEEPPEFNYSEPDDDAGFYHNDAPPYHMEEAAKSEPVPEPTADQTAEPTPEPAA 478 Query: 448 ERLASVTDRVQARPVPSALE--KAPAKKEAYRWKATTPVMQQKEVVATPKAL------KK 499 + + V D ++ R + + K + + ++PV A P+A K Sbjct: 479 QSSSGVADLLRVREQLAEKKNPDNSNKTLNSQTENSSPVALTVPAEAEPEAQPEHQPESK 538 Query: 500 ALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAVCLHLRS 558 +E+ PEL + EA E D W+A ++ + + L QV LN+ ++ D+ + + Sbjct: 539 DELNEELPELNDDIR-EAAEVDKWSAMIAGMDISGLARQVLLNSELQKLGDDDWLILVAE 597 Query: 559 SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESI 618 Q+ L N Q + E+L+ L G+T + P+ TPL +Q I E + +A E + Sbjct: 598 EQKSLLNESTSQAVRESLAGLLGATARVDFKVG-VPSQPTPLMVQQHINEYRHQRACEIL 656 Query: 619 IADNNIQTLRRFFDAELDEESIRP 642 D +Q L++ F A++DE SI+ Sbjct: 657 HGDAGVQDLQQRFQAQIDESSIQA 680 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 266/699 (38%), Positives = 394/699 (56%), Gaps = 62/699 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ VLARKWRP+ F+++VGQ HV+ AL+N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MTDTVLARKWRPKNFSELVGQTHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCGVC CR I++GRFVDLIE+DAAS+TKVEDTR+LL+NVQYAP +GR+ Sbjct: 61 ALNCEQGITSKPCGVCSTCRSIDEGRFVDLIEVDAASKTKVEDTRELLENVQYAPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDP KLP+T+LSRCLQF+L L + Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +IL +E + E AL ++A++A+GS RD+LS+ DQAIA G G+V AV AM Sbjct: 181 PQIQQHLAYILQQEQVTFEETALAMIAKSADGSARDSLSILDQAIAYGGGKVQYDAVQAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L+++ A+ + + + +I + A G+++ AL +++ LH+++M+Q+ Sbjct: 241 LGLVDQQFTLNILSALANESADELKEVIQQLALMGVDYTALNGQLIEALHQMSMLQVLGD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + +E+ +++L+ + P IQ+ YQ L+ ++++ APD R+G EM+LLR LAF Sbjct: 301 LTESSLIEVEM-LQKLSEQLSPERIQVLYQIALLAKQDMALAPDIRIGFEMSLLRMLAFK 359 Query: 361 P---------RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ------------ 399 P PE + RQ A P +P QP +A + Sbjct: 360 PVFSETMSSMEQTEPEEGMSRQENVKTARPGQNEPAAIPNQPAAADEARTNFEAPSHFEA 419 Query: 400 --APTVPLPETTSQVLAARQQLQ------------------RVQGATKAKKSEPAAATRA 439 AP +PET + ++ Q + + + +++ A Sbjct: 420 PSAPQSSMPETQAAPQSSAPQPSGEMDHLTDLKARLDSTLGKSEAPIEHRENHDAEVPTF 479 Query: 440 RPVNNAALERLASV---TDRVQARPVPSAL-----EKAPAKKEAYRWKATTPVMQQKEVV 491 + +LE+ AS T + RPV SA P +K A +A P + + Sbjct: 480 DVPSGQSLEQSASFLTETRQEDDRPVESAAAFQASSHVPVQK-AVTEEAMAPAFESPGME 538 Query: 492 ATPKALKKALEHEKTPELAA-----KLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE 546 + + ++ E E E ++ A+ W A ++QL L + ++A + Sbjct: 539 SVTPSSQEHFEQEPVSEAVVADAPIEMNADTASVTDWIALITQLQLEGMAAELARQSILV 598 Query: 547 ESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR-TPLEWRQ 604 + D ++ L + Q H A Q+L E + G + ++ D P TP + Sbjct: 599 KRDAQSLTLSIDPEQVHAKTELALQRLEEQVKAQLG----VRLIFVDYPEDHWTPAKHFA 654 Query: 605 AIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 A + + A ESI D +Q L + + ++ E SIRPI Sbjct: 655 AEAKARQGNAAESIRNDAVVQNLIQTLNLKVIESSIRPI 693 >UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 Tax=Vibrio RepID=Q7MIV2_VIBVY Length = 730 Score = 623 bits (1606), Expect = e-177, Method: Composition-based stats. Identities = 315/733 (42%), Positives = 399/733 (54%), Gaps = 93/733 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+ F +VVGQ HVLTAL N L R+HHAYLFSGTRGVGKTSI RL AK Sbjct: 1 MSYLALARKWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCG CD CREIE+GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 ALNCEKGITSAPCGQCDTCREIEEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+ IL +E + + RAL ++A AA+GS+RDALSLTDQAIA G+GQ+ T VS M Sbjct: 181 DAIHQQLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D DQA+ L+EA+ + M I + A G EW+ LL ++ LHRIAM QL P+ Sbjct: 241 LGTIDTDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +L E ++ L+R + P D+QL+YQ L GR +L AP+ R+G+EM +LR +AF Sbjct: 301 SLDKAQPDAE-KIELLSRALSPQDVQLFYQIALKGRDDLSLAPNGRIGMEMIVLRMMAFR 359 Query: 361 PRMPLPEPEVPRQ-------------------SFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 P + Q S A AP P+ P PQ Sbjct: 360 PADVSQANIISAQGANLASAPAAQSAAPQVSTSPAQTAPAMSAKPSSERVAPAERPQAVS 419 Query: 402 TVPLPETTSQVLAARQQLQRVQGATKAKKSEPA------AATRARPVNNAALERLASV-- 453 P +S + Q VQ + P P E A++ Sbjct: 420 HAPSRLASSMNAPSSVAPQPVQTEMPPQYDAPPMDYADYPPMDDMPPMGYGYEDAAALQP 479 Query: 454 -------TDRVQARPVPSAL---------------------------------------E 467 +A P P L + Sbjct: 480 EPQPAPQQAPERASPAPGGLTGLRHQLRSQRQGLAQNGGSKKSKAASAEKESVLDRVAQK 539 Query: 468 KAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQV 527 +A A + + R + KE + + K+ EL A+E + Sbjct: 540 QATAAQVSPRQSLAPSEPEVKEDEPYQWRPSQPVVQSKSKELTPTEIKRALEHEKTPEMA 599 Query: 528 SQL-----------------SLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQ 570 +L KLVEQ+ALN+ + + + L LRS Q+HLN AQ+ Sbjct: 600 EKLVAESLEQSEWAKLITQLETAKLVEQLALNSAFNKEGSTIALTLRSHQQHLNTDKAQK 659 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 +L AL+ G T L++ TPLE R+ +Y++KL QA S+ D ++Q + R Sbjct: 660 ELLSALNETLGETCHLSVEVG--GQGETPLELRERLYQQKLQQAFTSLENDTHVQFILRR 717 Query: 631 FDAELDEESIRPI 643 F AELD +S+RP+ Sbjct: 718 FSAELDRDSVRPV 730 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 265/667 (39%), Positives = 383/667 (57%), Gaps = 34/667 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TFAD+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE + PCG C++C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 61 SLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+P+T+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E++ ++P+ALQLL RAA GS+RDALSL DQAIA G G+V+ Q V M Sbjct: 181 QQVAEHLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+E ++ NGE ++ E +AR I +++ L E+ LL R+A++Q P+ Sbjct: 241 IGAVDKQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL ND E +R L++ + IQLYYQ + G+++LP APD G MTLLR LAF Sbjct: 301 ALANDDPERETLLR-LSQALSGEQIQLYYQCAIHGKQDLPLAPDEYAGFVMTLLRMLAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP--QPQSAPQQAPTV-----PLPETTSQVL 413 P + + + P P+S P AP V P + T + Sbjct: 360 PLAASGCDTQSQIEHTDLHSDHQKAEAEKKPFQLPKSEPIAAPAVEKEAAPAKQDTVE-R 418 Query: 414 AARQQLQRVQGATKAKKSE--PAAATRARPVNNAALERLAS---VTDRVQARPVPSALEK 468 ++ + +Q VQ E P+ + P AA + A+ +VQ P P Sbjct: 419 SSEETVQSVQQQADVPPWEEMPSQVSVESPQTQAAQMQEATEPLPVAKVQKAPAPEEYPH 478 Query: 469 A------PAKKEAYRWKAT--TPVMQQKEVVATP-----KALKKALEHEKTPELAAKLAA 515 P EAY ++ + VM+ + VA+ + ++ L+ PE + Sbjct: 479 MDEEIPPPYFDEAYTYEDSHHADVMEVPQPVASAESEEEEGDEEELQFAPLPEFKTENWH 538 Query: 516 EAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEA 575 IER +Q+ L + A ++ E+ + L L + N+ K+ + Sbjct: 539 SIIERFARKLGAAQM----LAQNAAWTSYDAEAG-LIMLSLTDEAKATANKERLDKICQT 593 Query: 576 LSM--LKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 LS G+ T D+ TP+ R+ I EE QA+E + AD Q + + F+A Sbjct: 594 LSEAYHLGNLRLQTEPWQDDKGWETPVMRRKHIQEEGRQQAQELLEADTTAQKILQTFEA 653 Query: 634 ELDEESI 640 + +S+ Sbjct: 654 QWLPDSL 660 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 282/648 (43%), Positives = 377/648 (58%), Gaps = 19/648 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP F VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPMQFDQVVGQQHVLEPLFHALEQQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C +C EIEQGRFVDLIE+DAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCERGVSARPCGECPSCEEIEQGRFVDLIEVDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT++SRCLQF+L+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVVSRCLQFNLRALDR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QLE++L E++ H+ +AL LLA++A+GS+RDALSLTDQAIA G G+V ++V M Sbjct: 181 EQIVGQLEYVLENENVPHDAQALTLLAQSAKGSMRDALSLTDQAIAQGQGKVQVESVQRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D L++A+ + V +E + + +L E+ ++HRIA++Q PA Sbjct: 241 LGHLADAHVHPLLDALASGDSGSVFEKFDELKSLVPDPLMILNELQRVIHRIALIQQIPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +G L R +P +QLYY+ ++ G+KE PYA D + VEMTLLR L+F Sbjct: 301 MMG--AEDKTNTTEALLRKLPAEVLQLYYRIVIEGKKEAPYAVDPQSAVEMTLLRLLSFT 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E + P + +T ++ + A Q + + A Q + Sbjct: 359 FENPESGEEALTR--PPESNLDTITQSEQAEEAAHAGQHSGDTSIQSEADDTSALEAQQR 416 Query: 421 RVQG-ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK------K 473 ++ A + + S PA A + A E LAS+ + Q EK ++ Sbjct: 417 DIEAQAAQHRMSRPAEGV-AEDNSVAPDEGLASLLNMRQDLSGHQEPEKKNSEIDIETPS 475 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 E + P Q E V T ++ + + + AA+ D WAA V ++ Sbjct: 476 EQPHLPSRQPDKQHAEPVQTTPVSLSHIQQ--RFDSSTRRAAD---VDSWAALVDATAVQ 530 Query: 534 KLVEQVALNAWKEESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 L Q+ LN+ E+ C+ + Q+ L + EAL + + E + Sbjct: 531 GLTRQLLLNSVLEKVGHQQWCIWVTEEQQSLLSEKTVALAREALCEVLSAQGEYRFLVGS 590 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + TPL +QAI +L QA+ + D+ L FDA DE SI Sbjct: 591 Q-QMSTPLLIQQAIDHYRLEQAKLWLQNDSGFNELLNSFDAVTDETSI 637 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 274/734 (37%), Positives = 367/734 (50%), Gaps = 93/734 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP FA++ GQEHVL AL N L+ R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MAYQVLARKWRPGNFAEMAGQEHVLKALTNALNQDRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C CREI +GRFVDLIEIDAASRTKVED R+LLDNVQYAP R R+ Sbjct: 61 CLNCEQGVSAIPCGECGVCREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I L H+L E++ E AL LARAAEGS+RDA+SLTDQAIA GDG++ + V M Sbjct: 181 QRIVSHLTHVLQAENVPAEEAALWELARAAEGSMRDAMSLTDQAIAFGDGKLEAKDVIEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + L+ + + ++A +N A ++ +L + LLHR+A+ Q P Sbjct: 241 LGTIEKHVVIDLLRTIAAQDCAAMLAQVNHMAQFAPDYAYVLQALAELLHRVAVEQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N + ++ ELA+T+ D QLYYQ L+GRK+L APD R G EM LLR +AF Sbjct: 301 GVDNSFGD-QQQVSELAQTLTAEDTQLYYQIALMGRKDLALAPDPRTGFEMALLRMIAFR 359 Query: 361 P------RMPLPEPEVPRQSFAPVAPTAVMTPTQVP----------PQPQSAPQQAPTVP 404 P ++ P S +A P+Q + P+Q P Sbjct: 360 PNIKSARQIQAPSAASSAASADDDKESAQPGPSQTETAVAAQPAPAVEATPEPRQEIAAP 419 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSE-PAAATRARPVNNAALERLASVTDRVQARPVP 463 PE QV R + + + P + ++ + RP P Sbjct: 420 QPEPPQQVAEKRDTPSPQEPPRQGLSQQGPQKQEPSNQGEAPVIDAAPVTPAQPIERPPP 479 Query: 464 SALEKAP----------------------------------------------AKKEAYR 477 E P K+E + Sbjct: 480 GHSEAEPPPVDDYDAYFADDPGPSDADYGFSGYPAETGYPDDGSHAAPVANPQPKEERPQ 539 Query: 478 WKATTPVMQQKEVVATPKAL--------------------------KKALEHEKTPELAA 511 A Q +E +A P +++ L Sbjct: 540 AAAPAREPQGREAIAPPPKSVTESVPGLHPGPGEAGSVNTTPPVVAANSVKKSPAGPLTP 599 Query: 512 KLAAEAIERD-PWAAQVSQLSLPKLVEQVALNAWKEE-SDNAVCLHLRSSQRHLNNRGAQ 569 L E + W V +L++ + +A E + V + N + Sbjct: 600 PLEGEPTMQGMVWKDAVKRLAISGMTATLAQRCALEAVTPGLVIFTIDREHLDFFNEAQR 659 Query: 570 QKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRR 629 ++L A+S G V++ + ++ TPL++ + E QA +I D NIQ + Sbjct: 660 ERLRAAVSEFMGEAVKIEVSAGESK-WLTPLQYAERRRAELQQQAETAIRNDPNIQMMAG 718 Query: 630 FFDAELDEESIRPI 643 F A + E SI PI Sbjct: 719 RFGAAVIENSIEPI 732 >UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YC05_9GAMM Length = 588 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 264/627 (42%), Positives = 358/627 (57%), Gaps = 41/627 (6%) Query: 18 VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCD 77 +VGQEHVL AL N L R+HHAYLF+GTRGVGKTSIAR+LAK LNC+ G+++ PCG C Sbjct: 1 MVGQEHVLKALINALDHNRLHHAYLFTGTRGVGKTSIARILAKCLNCDVGVSSEPCGQCS 60 Query: 78 NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFN 137 C I +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP GRFKVYLIDEVHMLS +SFN Sbjct: 61 ACLSISEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTAGRFKVYLIDEVHMLSTNSFN 120 Query: 138 ALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIA 197 ALLKTLEEPP HVKFLLATTDPQKLP TILSRCLQF+LK + E+I L+++L +E I Sbjct: 121 ALLKTLEEPPPHVKFLLATTDPQKLPATILSRCLQFNLKNMSPERIVVHLQNVLEQEMIT 180 Query: 198 HEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMV 257 +E AL LL R+A+GS+RDALSLTDQAI+ G G++ V +MLGT+D +VEA++ Sbjct: 181 YEEPALWLLGRSADGSMRDALSLTDQAISFGSGKLLEADVRSMLGTIDRSAVYEIVEALI 240 Query: 258 EANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELA 317 NG +V+A +N A ++ + L E+L LLHRIA+ Q P A N ++ ++ Sbjct: 241 AENGAQVLAAVNNMAEHAPDYLSALEELLMLLHRIAIAQAVPDATDNSFGD-GAKIIAMS 299 Query: 318 RTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAP 377 + D QL+YQ L GR++L APD R G EM LLR LAF P +P+ + +P Sbjct: 300 ALLTAEDTQLFYQLGLTGRRDLSLAPDLRSGFEMVLLRMLAFKPAG-IPQLPERSLTNSP 358 Query: 378 VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAAT 437 V+ A PQP P +Q ++ T S Sbjct: 359 VSVEA--------PQPVKKPDAG------------------VQSIKADTPVSFSSKLGPA 392 Query: 438 RARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL 497 ++ VN+ L+ +VT + P+ A E+ P V Sbjct: 393 QSSVVNDIQLQVDGAVTKAIGEEPL-----HAVTVSESVAVPLAAPAPAPVPVAVLVDDT 447 Query: 498 KKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK-EESDNAVCLHL 556 + +L+ EK P L+ + + D W A +L +V +A + + +DNA+ L L Sbjct: 448 EMSLD-EKGP-----LSLDQLRPDSWNALFERLGFGGVVGNIASHCILVDVTDNAMSLQL 501 Query: 557 RSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARE 616 ++ L + ++ E L++ + V + I A TP + + E+ A Sbjct: 502 DAANATLFSDSYTARIQEHLTVTLNTPVTVKIEVTPLSA-ETPALRKNRMQNERREAALL 560 Query: 617 SIIADNNIQTLRRFFDAELDEESIRPI 643 S+ D N+Q L FDA LDE S++P+ Sbjct: 561 SLKNDPNVQVLVSDFDAVLDEASVQPV 587 >UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxalobacter formigenes RepID=C3XBH9_OXAFO Length = 604 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 245/660 (37%), Positives = 349/660 (52%), Gaps = 73/660 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F ++VGQ+HV+ AL++ L R+HHAYLF+GTRG+GKT+++R+LAK Sbjct: 1 MSYLVLARKYRPKNFENIVGQDHVVRALSHALESQRLHHAYLFTGTRGIGKTTLSRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA+PCG+C+ C+ I+ RFVD +E+DAAS + D LL+ YAP RF Sbjct: 61 SLNCEKGITASPCGICEACKAIDSDRFVDYVEMDAASNRGIADMLQLLEQAVYAPTAARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNA+LKTLEEPPE+VKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYMIDEVHMLTSQAFNAMLKTLEEPPEYVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E+I E AL+LLA+ A+GS+RDALSL DQAIA G V+ +AV M Sbjct: 181 SHIVDHLSRILELENIPFEKPALRLLAQGAQGSMRDALSLADQAIAYTAGHVTDEAVQDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++ + +G ++ + +E A R + + L ++ LL +IAM+Q P Sbjct: 241 LGALDQTYLIRLLDHLANRDGTSLLKVADEMAFRSLSYSTALQDLGLLLQKIAMIQSVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +D+A + + LA P ++QLYYQ + GR EL APD G MTLLR LAF Sbjct: 301 YPLDDIADSDN-LSRLAAIFSPEELQLYYQIAIHGRNELGLAPDEYAGFSMTLLRMLAFS 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL----------PETTS 410 P Q + T P + Q+ Q+ P+ P+ PE T Sbjct: 360 PD---KGNRSIPQIVSKSERTPANRPKTDSGKGQAVEQKVPSSPVVEKIPVPEKKPEETV 416 Query: 411 QVLA--ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEK 468 + + QG AK E A AL +++ + A P ++K Sbjct: 417 SAIPPWVDDESFSNQGGQTAKSPEVKKNESAPVTEVVAL----AMSAEMPAAPADVPVKK 472 Query: 469 APAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS 528 P + W P + Sbjct: 473 NPGEGS---WNGNWPELAAV---------------------------------------- 489 Query: 529 QLSLPKLVEQVALNAWK---EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVE 585 L + +V+Q+A E+ D+A LHL+S L +L E L+ G V+ Sbjct: 490 -LPVRGMVQQLAQQTELVHWEKKDSACVLHLKSPIATLCTPNNINRLTEVLAEHFGQPVK 548 Query: 586 LT--IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +T I + + A + +E R E+ QA E+I D ++++ F + E S++P+ Sbjct: 549 ITTEIGKVEETANQNAIEAR----AERQRQAEEAITNDPYVKSVIAEFGGHIVEGSVKPV 604 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 277/648 (42%), Positives = 366/648 (56%), Gaps = 20/648 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FAD+VGQEHV+ AL N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 22 MTYQVLARKWRPKRFADLVGQEHVVRALTNALAGERLHHAYLLTGTRGVGKTTIARILAK 81 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GR+ Sbjct: 82 SLNCEAGVGAEPCGECSACRQIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRY 141 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 142 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 201 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L +L+ E +++E AL LL RAA GS+RDALSL DQAIA G G+V V AM Sbjct: 202 QQVAGHLARVLDVEQVSYEAPALALLGRAAAGSMRDALSLLDQAIAYGVGKVEEGGVRAM 261 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+EA+ EA+G R++A A RG+ +++ L E+ LL +IA+ Q PA Sbjct: 262 LGAVDRAYLYTLLEALAEADGPRLIAEAKALAERGVGFDSALGELALLLQQIALAQTVPA 321 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D E + LA+ I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 322 AITGDDPDAEAVL-ALAQLIAPEDVQLYYQIAIHGRKDLALAPDEHAGFTMTLLRMLAFH 380 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P AP T P+P S P AP+ P E S A +L Sbjct: 381 PL------------NAPGDSTPTPRAAASRPEPASRP-AAPSEPSVEGASAAKALLARLS 427 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 GA ++ + P + A P A A P E W+ Sbjct: 428 GRNGAARSAPATPDESAPADPEPEPARVEPAPRPVPAAPAVATQPEPGTPPSVELAPWED 487 Query: 481 TTPVMQQKEVVA---TPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP-KLV 536 A A A E P A + WAA V++L Sbjct: 488 APDDAGDVAAEAWQAGASADDSAAEAWSEPAAPPAAAEPYVFDGDWAALVAELGARMGAS 547 Query: 537 EQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 +A NA + D + L + S RHL R Q+KL AL+ G EL++ + Sbjct: 548 RMLAHNAVLKSWDGRRLQLAVPESFRHLATRDYQEKLKAALAERFGQAPELSVSV-EELG 606 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + TP +E+LA AR ++ D ++ L F+A L E+I+P+ Sbjct: 607 METPAMREARFRQEQLAAARVNLENDPVVRQLVGEFNAVLLTETIQPV 654 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 288/717 (40%), Positives = 382/717 (53%), Gaps = 77/717 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF ++VGQEHV AL N L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRTFHELVGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G+T+ PCG C+ CREI++GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP +GR+ Sbjct: 61 CLNCRQGVTSVPCGECETCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFTLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L HIL E +A++ +AL LL +AA+GS+RDA+SLTDQAIA G G+V V+AM Sbjct: 181 ERVVGHLSHILQAESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFGQGEVRHADVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+L EA+ E + RV+ + A +G ++ +L ++ G+ HR+A+ Q+ P Sbjct: 241 LGTLDHRHLLALAEALAEVDAARVLQEVASLAEQGPDFGGILDDLAGIFHRLAIAQMVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N + + LA D+QLYYQ L GR ++ APD R +EMTLLR LAF Sbjct: 301 ALDNGHGDRDT-LLPLAARFTAEDVQLYYQIALQGRGDMESAPDPRTALEMTLLRMLAFR 359 Query: 361 PR-MPLP-EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL------------- 405 P+ +P P + +P + A TA P Q +AP Q Sbjct: 360 PQGVPKPPQTPLPIRGAAEGQATASTPTADAPGQLAAAPSQPSPADTPPPAADAAPAHPP 419 Query: 406 --PETTSQVL---------------------AARQQLQRVQGATKAKKSEPAAATRARPV 442 P+T + V AA L+ AT+A +EP + Sbjct: 420 SRPDTQAPVAEEEHGAAAGADASSASPADEPAAPGTLESESFATQAFDNEPLESAPPDIE 479 Query: 443 NNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK--------------------ATT 482 + A + PV A A + Sbjct: 480 SAVAAPPEPAAPVTEAVPPVADAQATAAEDALEDALEDEAQRQADADGAVDVDDAPPWVL 539 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAE---------------AIERDPWAAQV 527 Q + + E+A A A + W A Sbjct: 540 DDAQMPADEISAPPEPPSAPDAPATEVAEDADAPAPTAQAPAVATPDTGAFDHARWLASF 599 Query: 528 SQLSLPKLVEQVALNAWKEESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 + L L L +A + EE D + + L L SQ + +++ +AL+ +G L Sbjct: 600 ASLGLGGLTRNLAAHCIVEEDDGDTLTLRLDPSQSAMLADVHVERMTKALAE-QGVARRL 658 Query: 587 TIVEDDNP-AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + P TP + + + + AQA E++ D +IQ L + F A+L E S+ P Sbjct: 659 HVTVAAIPEGWETPRAQGERLAQARHAQAVEALRRDPHIQMLEQDFGAQLLERSVTP 715 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 603 bits (1554), Expect = e-171, Method: Composition-based stats. Identities = 246/644 (38%), Positives = 344/644 (53%), Gaps = 36/644 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPKLFEALVGQEHVVRALTNALEQQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCGVC C +I++GRFVD++E+DAAS T+V+ R+LLDN QYAP GRF Sbjct: 61 SLNCETGITAHPCGVCSACVDIDRGRFVDMLEVDAASNTQVDSMRELLDNAQYAPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLSR +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+L+ + Sbjct: 121 KVYIIDEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVTVLSRCLQFNLRQMST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L+ +L +E+I + ALQL++RAA GS+RDALSL DQAIA G +V+ V AM Sbjct: 181 PAITSHLQEVLAKENIPSDSIALQLISRAANGSMRDALSLLDQAIAYGGNRVNESEVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L++A++ +G +MA R + ++ L ++ LLH +A+ Q P Sbjct: 241 LGAIDQSYLYGLLDALIAQDGPSLMAQAKSMEERSLSFDTALADLAQLLHHLAVAQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ D+ + +LA +P +QLYYQ L+GR++L APD G M LLR LAF Sbjct: 301 SIPLDLPE-RTALLDLATKLPADKVQLYYQIALLGRRDLGLAPDEFAGFTMCLLRMLAF- 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + + P P P + + ++ A + Sbjct: 359 ------------------SNESTSKPAPTAPAPSGSDRPIAQHAGSAASALAAATMARSA 400 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A A P A A + E + A + + + PA + Sbjct: 401 TPSPAAIASPPTPQAKPVAEATMVTSNEVDVAPATAPAAATPVATVAETPADVPT-HSQV 459 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 ++P + P +E + + W V +L L L +A Sbjct: 460 SSPEPA-YTAASEPTLASSPVE----------DSLQEEFDGNWRLLVDKLKL-GLARALA 507 Query: 541 LNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 + + + + L + + +HL + Q+KL A+ G + L TP Sbjct: 508 QHCELIGHTADRLELQVPEAHKHLLDPNYQEKLKAAIEAHFGRKMHLQFSIG--GGNNTP 565 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E +QA SI D +Q L R F A++ SI+P+ Sbjct: 566 AHQISQEKAELQSQAESSIQQDGFVQALMRDFGAQIIPSSIKPL 609 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 266/647 (41%), Positives = 355/647 (54%), Gaps = 62/647 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP++F ++VGQEHVL AL N L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MTYQVLARKWRPKSFGEMVGQEHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GR VDL+E+DAASRTKVEDTR+LL+NVQYAP R R+ Sbjct: 61 CLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFNLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L ++L E ++ E AL LL RAA GS+RDALSLTDQAIA G G++ V +M Sbjct: 181 EQIVGHLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETDVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D L+E + + ++A++ A ++E E++ ++HR+A+ Q P Sbjct: 241 LGSVDLSFVYQLLEGVAAGDPAELLAIVGRMAEHAPDFEGSTDELISMVHRVAVAQAVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N + R+ LA++I D QL+YQ + G++++ APD R G EM LLR LAF Sbjct: 301 AIDNSWGDAD-RVAALAQSIGAEDAQLFYQIAINGKRDMALAPDPRSGFEMLLLRMLAFR 359 Query: 361 PRMPLPEP-EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P + E AP+ P T +V Sbjct: 360 PAAVIDESLGAADLQPAPLNPDQGSTAGEV------------------------------ 389 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 GAT K EP R V + L+ R R P P+ + Sbjct: 390 ----GATAKKPHEP----RQEAVPSIELQAPEVSPQRPTERLKPEQ----PSNDADPASR 437 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP--WAAQVSQLSLPKLVE 537 P++ PE K+ +E P W +SQL L +V+ Sbjct: 438 QAVPLVSSPPPEV--------------PESTPKVTGVILEPSPENWPQLLSQLGLLGMVQ 483 Query: 538 QVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 +A N E + + L + L N G + K+ AL + + I + P Sbjct: 484 SIASNMQLIEAAAGQLEFVLDTDNASLFNDGHRDKIRLALQNYLDRELSVAITVGEPPG- 542 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +TP + E+ QA E+I +D +Q L FD +LD SI P+ Sbjct: 543 KTPAMIQAKAASERQKQAIEAIESDPRLQALITKFDGQLDRASIAPL 589 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 271/719 (37%), Positives = 367/719 (51%), Gaps = 79/719 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F +VGQEHV+ AL + L+ GR+HHA+LF+GTRGVGKT+I+R+LAK Sbjct: 1 MSYQVLARKWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCG+CD CR I+ RF D +E+DAAS VE+ LLD YAP +GRF Sbjct: 61 ALNCETGITAEPCGICDACRAIDADRFPDYVEMDAASNRGVEEMAALLDKAVYAPVQGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E +A EP AL+ LA+AA GS+RDALSL DQAIA G G+V + VS M Sbjct: 181 GHIVDHLTRILQAEEVAFEPGALRHLAKAASGSMRDALSLLDQAIAHGAGRVEEEQVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ DD ++++A+ + ++A+ + AR + ++A L + L+HR+A+ Q +PA Sbjct: 241 LGTVGDDHLYAVLDALAAGDVPALLAVADGMEARSLSFDAALQALATLVHRVALAQYAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +++ R+ +QL YQ + GR ELP APD G MTLLR AF Sbjct: 301 AIADELE--RARILGYVERFDAEFLQLAYQVAVHGRDELPLAPDDYTGFTMTLLRLHAFR 358 Query: 361 PRMP--LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPT-VPLPETTS------- 410 P P L P VP A A + ++A P VP S Sbjct: 359 PEQPAALGGPGVPSGPDAGRARAPALAAGGPAESGRAAESGVPAEVPARTVASAGIAGPA 418 Query: 411 --QVLAARQQLQRVQGATKAKKSEPAAATRARP-----------------------VNNA 445 V A + + E AA +P Sbjct: 419 PAAVPAPAAGADAAIPSAQQTVLEAAAPASMQPGSVPAAQQAVAPAPASAPPRRSAREEH 478 Query: 446 ALERLASVTDRVQARPV--------------PSALEKAPAKKEAYRWKATTPVMQQKEVV 491 A++ + VQ P P E EAY A Sbjct: 479 AVQPARAAPASVQDVPPWEDLPPEAYADSDLPPPREARNGHDEAYAASAGAHTGAISRAR 538 Query: 492 ATP-----------KALKKALEHEKTPELAAKLAAEAIER-------------DPWAAQV 527 P + L + PE A AA + W + Sbjct: 539 PEPRGGGARRAEEVPSRSAPLPAVRAPEPATSPAAPTQDAPAASGDAAALLALGDWRGLI 598 Query: 528 SQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHL--NNRGAQQKLAEALSMLKGSTV 584 L L LV ++A + W E D + L L ++ RHL NRGA ++L + L G T+ Sbjct: 599 RALGLGGLVRELAQHCEWVECGDGVLQLRLSTAHRHLLDMNRGAVERLQDVLCAALGRTL 658 Query: 585 ELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + I D +TP + + + A+A ++ AD ++ L FDA L E +++P+ Sbjct: 659 AVRIAIGDISG-QTPAQRDAIERQVRHAEAVAALEADPFVRELIERFDATLVENTVKPL 716 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 255/667 (38%), Positives = 356/667 (53%), Gaps = 42/667 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+ FA++VGQEHV+ AL+N L GR+HHA+LF+GTRGVGKT+IAR+ AK Sbjct: 100 MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK 159 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG +A PCG C C +I+ GR++DL+EIDAAS T V+D R++++N QY P+RG+F Sbjct: 160 SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF 219 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ +FNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK LD Sbjct: 220 KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE 279 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI+ Q+ IL E I +P A+ L++AA+GSLRD LSL DQAIA G + V M Sbjct: 280 DQIQGQMTRILAAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM 339 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D Q ++++A+ + +G +++ ++ A +W +L + LHRI + QL P+ Sbjct: 340 LGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS 399 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A + P +QL+YQ L GR++L AP R G EM +LR LAF Sbjct: 400 VA---FVGDGIDPTGFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFR 456 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P +P A T T V P +A ++ + + Sbjct: 457 PAAAVPAGSGDDGRGASAGGHTRGTATGVQAAPAAA-----------APARAATSAKAAD 505 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + AA + + AA E S P A++ AP + +A +A Sbjct: 506 VSPAPVVSAPPVAAAPSPVVVLPTAAAEPAPSAPPARTDDTPPWAVDDAPVRAQAAPQRA 565 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA----------------------- 517 T V ++A AL + A Sbjct: 566 TAEVPAAVPLMA--PEAAMALPATVADDAAPAAMDAVVPVAPPSAPAPVTPPAATFDDGH 623 Query: 518 -IERDPWAAQVSQLSLPKLVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEA 575 + + W V++ L Q+A N A+ D + L L +LN+ + LA+A Sbjct: 624 IADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLALAPGFEYLNSERSIANLAQA 683 Query: 576 LSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 L+ G+T + I + V T E E+ + A + + D N+Q L + A + Sbjct: 684 LAPELGNTPRIVIETG-SADVETLHERANRQKGERQSAAETAFMNDPNVQQLIQQQGARV 742 Query: 636 DEESIRP 642 +SIRP Sbjct: 743 VPDSIRP 749 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 269/662 (40%), Positives = 361/662 (54%), Gaps = 44/662 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG TA PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GRF Sbjct: 61 SLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTMGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E I +E AL LL RAA GS+RDA SL DQAIA G G+V V AM Sbjct: 181 QQVSSHLAHMLDIEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L++A+ ++G +MA + A RG+ +++ L E+ LL ++A+ Q PA Sbjct: 241 LGAVDRRYLFTLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL D + + LA I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 301 ALAADEPERDT-LFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFH 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAV-----------------MTPTQVPPQPQSAPQQAPTV 403 P + P + A V P V M+P Q QA Sbjct: 360 PANAPAQTAAPARPAAAVQPRPVAASAAAVASVSVPAERGMSPAARALQAAGLGAQAQGK 419 Query: 404 PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVP 463 P S + + A + SEP+ + A ++ + Sbjct: 420 PRAAEPSPAAEPEPEPAPLPSAVVSAVSEPSKPAPSPQPAPALAAPVSEPAAQDDEDERD 479 Query: 464 SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPW 523 + A MQQ + P + W Sbjct: 480 EEEIVEAPWSDDDAMPAY---MQQPPLEDEPSSYS--------------------FDGDW 516 Query: 524 AAQVSQLSLP-KLVEQVALNAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKG 581 V+ L +A NA + S + + L + S RH++ R Q+KL AL+ G Sbjct: 517 QRLVADLGAKLGAARMLAHNAVLKRWSQDRLELAVPESFRHMSGRDYQEKLKAALAERFG 576 Query: 582 STVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 V+L + + + TP + +E+LA ARE + D +Q + R F A L E+I+ Sbjct: 577 HPVDLAVTV-EELGMETPAMTDARLRQEQLAVARECMQNDPVVQQMVREFGATLLIETIQ 635 Query: 642 PI 643 P+ Sbjct: 636 PV 637 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 270/643 (41%), Positives = 363/643 (56%), Gaps = 34/643 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I ++ AL L +AAEGS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYDEPALLSLGKAAEGSMRDALSLTDQAIAFGGEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALASVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 -------SYDETQQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ L + + P +V P V + + L +T + A Sbjct: 354 PKGVLVQGDNP----------SVKKPKAVASSEEPGDKPDLRALLNKTPAAAPAPVSLPT 403 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + EP+ A A + P SA+ AP++ E Sbjct: 404 PASASAPVTAPEPSPTRAAPAAAEQAASADDAPPWDESPGPSTSAVAVAPSQSEPQAEPE 463 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Q+ P E T E WAA + +L + V +A Sbjct: 464 PNQAPTQEVEPLAP-------LAEPTNEAEVATW--------WAALLLRLDVDGTVRNIA 508 Query: 541 LNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 NA ++ L + + L NR ++L+ AL +++ + + P TP Sbjct: 509 RNAVLISREESVWTLRISPGHQVLVNRERLEELSGALGNYFQRRIQVQVEFEQQPGA-TP 567 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 +A +E L QA++++ +D +Q L F LD+ES+ P Sbjct: 568 EVIAEARRQELLLQAKDTLHSDPVVQQLITTFGGRLDDESVTP 610 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 267/645 (41%), Positives = 363/645 (56%), Gaps = 79/645 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++F +VVGQ+HVL AL NGL R+HHA+LFSGTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFEEVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++TPCGVC +C E++ GRFVDLIE+DAASRTKV+DTR+LLDNVQYAP++GR+ Sbjct: 61 SLNCEQGVSSTPCGVCQSCTEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFL ATTDPQKLPVTILSRCLQF+L+ L++ Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLEL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L ++L +E I EP AL+ LARAA+GS+RDALSL DQAIA G G+V++++V M Sbjct: 181 TQISDHLRYLLEQETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++ DQ + +++A+++ +G+ ++A E AA G ++ + +L L +IA +QL P Sbjct: 241 LGSISQDQLILILDALLKQDGKALLAQSAELAALGRDFHVVFDFLLSALQQIATLQLVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A ++ ELA P IQL YQ L G+++L +A D + G +MTL+R L+F Sbjct: 301 --LEPVEANSPQLTELAAQFDPETIQLLYQIALHGKRDLSWAADPKSGFDMTLMRMLSFQ 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P PEV + P +S P + P V P S+ + + Sbjct: 359 PTTP---PEVGDE-----------------PLKKSPPPRKPVVSSP-PASEAMTTKSVSV 397 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A K EP A + + + P P W Sbjct: 398 STSPAVKQALIEPDIAPKPQIKPDVIAAN----------EPEPIDNTLISVDLSPANWTQ 447 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 + KL+A A + L E A Sbjct: 448 IIAEL--------------------------KLSALAHQ---------------LAENSA 466 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 L + +V L L HL ++QKL +ALS G ++L + D P Sbjct: 467 L---VKCEQQSVYLSLSPELGHLATDNSKQKLQKALSKKLGQDLKLVFADADTTFETGPT 523 Query: 601 EWRQAIYEE--KLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + ++ K QA ESI D ++ ++ F+A + E SI+PI Sbjct: 524 LAVERAEQQAVKQQQAIESIHNDPTVEIIKNTFNARIIEHSIKPI 568 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 274/650 (42%), Positives = 366/650 (56%), Gaps = 28/650 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I +E AL L +AA+GS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYEEPALLSLGKAAQGSMRDALSLTDQAIAFGSEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALATVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 -------SYDETQQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVP-------PQPQSAPQQAPTVPLPETTSQVL 413 P+ L + + P + P A P P P +A P + Sbjct: 354 PKGVLVQGDSP-AAKKPEAAVPSAEPGGKPDLRALLNSPPAAASHSEPAARPAAQPPEPA 412 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 A Q + + PA+A A P + S + + A A Sbjct: 413 PATVTSAPAQQTAPVEAAAPASADDAPPWDEGPASSSPSASAALAQVEANQPEPAAEAAA 472 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 + P P++ A E T E WAA + +L + Sbjct: 473 AVAAQPQSDPE---PNAEPAPESENLAPLAEPTNEAEVATW--------WAALLLRLDVD 521 Query: 534 KLVEQVALNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 V +A NA ++ L + + L N+ ++L+ AL +++ + + Sbjct: 522 GTVRNIARNAVLISREESVWTLRISPGHQVLVNKERLEELSGALGNYFQRRIQVQVEFEQ 581 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 P TP +A +E LAQA++++ AD +Q L F LDEES+ P Sbjct: 582 QPG-ETPERMAEARRQELLAQAKDTLHADPVVQQLVTTFAGRLDEESVTP 630 >UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax=Betaproteobacteria RepID=A6T0H3_JANMA Length = 673 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 260/677 (38%), Positives = 346/677 (51%), Gaps = 38/677 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP++F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 NC GIT+TPCGVC+ C I+ GRFVD IE+DAAS V++ LL+ YAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 + RFKVY+IDEVHML+ H+FN++LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L++IL +E+I E AL+LLA+ A GS+RDALSLTDQAIA G+V+ Sbjct: 181 KQMPPGHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLD 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG LD + L++A+ E +G ++A+ +E A R + + A L ++ LLHR+A+ Sbjct: 241 AVQGMLGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PAA+ D+ MR LA +IQL+YQ + GR EL APD G MTLLR Sbjct: 301 QTVPAAVPEDLPEYADVMR-LAGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLR 359 Query: 356 ALAFHP----RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 LAF P P + A AV P SA QA + P Sbjct: 360 MLAFRPGFGPAEAKPVAAAAPAARPAAATPAVAPAASAPAARLSAAPQAASTSAPVARPT 419 Query: 412 VLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 + + K + AA P A A+V A V A Sbjct: 420 GAMSPARAALEAARAGVKGAPAPAARPVAPAAPVAAPAPAAVAAPSPAMAVAD-RSPAID 478 Query: 472 KKEAYRWKATTPVM--QQKEVVATPKALKKALEHEKTPELAAKLAAEAIE---------- 519 A W P E ++P A KK AA A Sbjct: 479 MAPAPPWDDEPPFAGSNGIEEFSSPVAQKKTEPEPAAVAEAAPAPAPVPAAPRVARPFQL 538 Query: 520 --------RDPWAAQVSQLSLPKLVEQVALNAWK-----EESDNAVCLHLRSSQRHLNNR 566 W A + L + + +Q+AL + + L + L Sbjct: 539 HPVASLNWDGNWPALAAILPVRGVAQQLALQSELLKCGPTPESAQITFDLLVAVDVLLAN 598 Query: 567 GAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT 626 G+ +KL L G TV L T A E+ +A +S+ D +Q Sbjct: 599 GSAEKLTAVLCEHFGQTVRLQTTIGAVE--HTASAAAIADRAERQREAEQSMQEDPFVQK 656 Query: 627 LRRFFDAELDEESIRPI 643 L R F A + S++P+ Sbjct: 657 LMREFGATIVPGSVKPV 673 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 267/643 (41%), Positives = 334/643 (51%), Gaps = 74/643 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+QVLARKWRP F D+VGQ HV+ ALAN LS R+HHAYLF+GTRGVGKT+IAR+LA+ Sbjct: 1 MSHQVLARKWRPGRFEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C +C EI +GR +DLIE+DAASRT+V+DTR+LLDNV YAP GRF Sbjct: 61 CLNCETGITATPCGECRSCVEIAEGRHLDLIEVDAASRTRVDDTRELLDNVSYAPTAGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E + EP AL L AAEGS+RDALSLTDQAIA G +++ M Sbjct: 181 ALIAEHLTRILEAEGLQAEPGALLRLGEAAEGSMRDALSLTDQAIAYGGDRLTESDACDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L + L++A +G +M + E G +W LL E+ L+HR+A+ QL Sbjct: 241 LGLLPRTRLTGLLDAAFAGDGPGLMQGLQELKGLGPDWSRLLDELAALVHRVAVEQLVRG 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 G D A E RE A I +QL YQ L+ G ++LP+APD +MGVEMTLLR LAF Sbjct: 301 EGGAEDDDAAERWARETAARIDAETLQLTYQILIHGARDLPWAPDAQMGVEMTLLRLLAF 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P + A P++ P P P+ T Sbjct: 361 RPEGPGEGAVSVERQGGTPATA-----------PRTGPSADPATARPDAT---------- 399 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 R A R + P Sbjct: 400 ----------------------------MRSAPPPIPEPPRERAQERVREPDPGSDIGLN 431 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 + P + E V +P+ W L V ++ Sbjct: 432 ESAPRPRDAEPVRSPEPDSG--------------------PFDWHRFAEGLP-TGTVREL 470 Query: 540 ALNAWKEESDNA-VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 AL+ ++ D+ V + + L + +L EAL G +V L IV+ P+ T Sbjct: 471 ALHGELQQLDDESVVIAVAP--GTLYTDRTRTRLKEALETRLGHSVRLEIVDQTQPSQAT 528 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 P A E+ A A ++ D +Q L F AEL IR Sbjct: 529 PAARLAADAAERQASAETAMREDPVVQALGEAFGAELGTVRIR 571 >UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYG2_9GAMM Length = 672 Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 251/646 (38%), Positives = 347/646 (53%), Gaps = 65/646 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQVLARKWRP F ++VGQ+HVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 84 MGYQVLARKWRPGNFQEMVGQQHVLRALVNALDNDRLHHAYLFTGTRGVGKTTVARILAK 143 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+++TPCG CD+C EI +GR VDL+E+DAASRTKVEDTR+LL+NV YAP R RF Sbjct: 144 CLNCDQGVSSTPCGTCDSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVLYAPTRSRF 203 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP H KFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 204 KIYLIDEVHMLSGHSFNALLKTLEEPPPHAKFLLATTDPQKLPATVLSRCLQFNLKNMVP 263 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L +L EE +A + +L LLARAAEGS+RDALSLTDQAI GDG ++ V AM Sbjct: 264 EEIVAHLGKVLEEESVAFDNGSLALLARAAEGSMRDALSLTDQAIGFGDGGLAESDVRAM 323 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L +++A+++ + + ++A+I + A+ ++ A L ++ +LH++ + Q P Sbjct: 324 LGTVDRARVLDVLDAILDNDPKTLLAVIEQIASHAPDYVATLDDLASVLHQVTIAQWVPD 383 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + A+ R+ ++A + ++QL+YQ GR E+ +PD R +EM LLR +AF Sbjct: 384 A-ADPTASQSERIAKVAASTTVDEVQLFYQFAAAGRPEVQRSPDPRAALEMVLLRMIAFR 442 Query: 361 PR---MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P E P+++ PV P + + + P T + L Sbjct: 443 PAEVISDAHEVPPPKKTEPPVPPVDSVGAGAI----------ETSGSAPSLTHEELRPPV 492 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 +L P +A + V D + P P E P E R Sbjct: 493 RL------------APRVVADQPEKADAIPAPIDPVVDAPTSNPQPGPAESEP--LEPPR 538 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 A P + W A L+L + E Sbjct: 539 VAADLPAPAE-----------------------------------WPAFFDDLALRGIAE 563 Query: 538 QVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 +A++ + S + L S L N + E + V + + A Sbjct: 564 NIAMHCELRSVSGRTLSFVLDQSNAGLFNERHVAAIEEQFNAHLQPPVTIEVEVGVVGAA 623 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP R + + A +++ D + T FDAE+ SI P Sbjct: 624 -TPAARRAELEAARQKAAEDALAEDPVLTTFLADFDAEVIVGSIEP 668 >UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XQ9_COLP3 Length = 715 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 273/716 (38%), Positives = 378/716 (52%), Gaps = 76/716 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++GQEHV+ LAN LS R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT PCG CD C +I+QGRFVDL+EIDAAS+TKV+DTR++LDNVQYAP+RGRF Sbjct: 61 SLNCELGITDKPCGKCDACIDIDQGRFVDLLEIDAASKTKVDDTREILDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKF+LATTDPQKLP+T+LSRCLQFHLKAL V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L IL+ E ++HE L LLA+AA GS+RD+LSLTDQAIA G G ++ + M Sbjct: 181 KQIEDKLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + LV +++ + + +M L E A+ + L E++ L H+IA++Q+ Sbjct: 241 LGGIDQNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + L ++ ++ + D+QLYYQ L GRK+LPYA D + +MTLLR AF Sbjct: 301 PFDLPADLLALL-KKFSQAMSAEDVQLYYQISLNGRKDLPYAFDEQAAFDMTLLRLFAFK 359 Query: 361 PRM------PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET------ 408 P + + + + T+ + A T + E+ Sbjct: 360 PMQKSQLTNESTIDNIEQNTAISFDDDNLSKTTETLSNNADIAKAAVTEAVVESFAEVDI 419 Query: 409 ---------TSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLAS------- 452 T Q Q L Q A + K+SE + + + + E A Sbjct: 420 SDSAAATDNTQQTELNEQMLAIEQQADELKQSENNSLNQTPAQHVVSQEVKAPQQVPVVE 479 Query: 453 -----------------------------VTDRVQARPVPSALEKAPAKKEAYRWKAT-- 481 + R R LEK K + Sbjct: 480 SYKEKQNTAPIVPNEQVGQLSIHSPVGSVLATRNMLRSRKKELEKQTKKSSDATLRQPNR 539 Query: 482 -----TPVMQQKEVVATPKALK-KALEHEKTPEL-------AAKLAAEAIERDPWAAQVS 528 P+ + ++L P+L +A + D WA + Sbjct: 540 ADNSKNKTQDSVNATVKPQVVSTESLVIAPEPDLPFHQDSIDPAKVTKANQVDKWAHMID 599 Query: 529 QLSLPKLVEQVALNAWKEE--SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 + L + Q+A++A E +D+ + L L + RHL+ A Q L A+ + + Sbjct: 600 SMQLTARIRQLAIHATISEKSTDDNLILKLDQATRHLSTEIAHQHLQSAICEFLARQITV 659 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 T+ + P + + I +++L A+ + D + L+ F A L+EESI P Sbjct: 660 TLDIVEETVAD-PYQIQGQINDKRLEYAKTLLKEDAVVIALQETFQASLNEESISP 714 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 250/704 (35%), Positives = 358/704 (50%), Gaps = 68/704 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+D+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 30 MTYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAK 89 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PCGVC +C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 90 SLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 149 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+PVT+LSRCLQF L+ + Sbjct: 150 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA 209 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E IA++P ALQLL RAA GS+RDALSL DQAIA G G+V+ V M Sbjct: 210 QQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQM 269 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+ +V +GE ++A E AA + ++ L E+ LL ++A++Q P+ Sbjct: 270 IGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPS 329 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +D ++ + LA+TI IQLYYQ + G+++L APD G MTLLR LAF Sbjct: 330 ALAHDDPDSDI-LHRLAQTISGEQIQLYYQIAVHGKRDLGLAPDEYAGFMMTLLRMLAFA 388 Query: 361 P-------------------------------RMPLPEPEVPRQSFAPVAPTAVMTPTQV 389 P + P P PE +A P++ Sbjct: 389 PLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEADAAQTPVQTASAAAMPSEG 448 Query: 390 PPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER 449 + Q+ VP E R + SE + N A + Sbjct: 449 KTAGPVSHQENNDVPPWEDAPDKTETAAGTARTSAKSIQTASEAETPPENQVSKNKAADN 508 Query: 450 --LASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 AS+++ P+ + + E + +A P + P Sbjct: 509 ETEASLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGFPDNDCPPEDGVEI---PPP 565 Query: 508 ELAAKLAAEA--------------------------IERDPWAAQVSQLSLP-KLVEQVA 540 + A L A+ + WAA V + + A Sbjct: 566 DWANVLPADTAGGGTDEEAEAGGIGGNNTPSAPPPEFSTENWAAIVRHFARKLGAAQMPA 625 Query: 541 LNAWKEE---SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL-TIVEDDNPAV 596 ++ E + L + + R ++ K+ + L+ G + L T D Sbjct: 626 QHSAWTEYRSDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGR 685 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 TP + + E +A+ + AD Q + + F A+ ES+ Sbjct: 686 ETPAMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPESL 729 >UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Psychromonas RepID=A1SX03_PSYIN Length = 774 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 285/778 (36%), Positives = 392/778 (50%), Gaps = 139/778 (17%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VVGQ+HVLTAL+N L+ R+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPGNFQEVVGQQHVLTALSNSLAQNRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TATPCG C +C+ I+QGRFVDL+EIDAASRTKV+DTR++LDNVQY PA+GR+ Sbjct: 61 SLNCEKGVTATPCGACVHCQAIDQGRFVDLLEIDAASRTKVDDTREMLDNVQYKPAQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+T+LSRCLQFHLKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITVLSRCLQFHLKAILP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL +ILN E E AL ++A AAEGS+RDALSLTDQA+A G G ++ Q+V M Sbjct: 181 QEIETQLAYILNHEQATFEHAALTVIATAAEGSMRDALSLTDQALAFGSGHIAYQSVLKM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D++ L+ + N +V I+E G ++ L + L H IA+ Q+ P Sbjct: 241 LGSIDNNHLHYLLHFIASGNVSKVFLKIDEFVHLGADFAMLHQTLASLCHEIALSQMQPK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAP----------------- 343 +A++L LA + P ++QLYYQ + G K+ +AP Sbjct: 301 QNVTQKSAVQL----LAERLTPEEVQLYYQIAVQGYKDYAFAPNGKIAFEMTVMRLLAFK 356 Query: 344 -------DRRMG-------------------------VEMT---LLRALAFHPRMPL--- 365 D R VE+ ++ L +P Sbjct: 357 PANYISLDERQLGNPNSAEASDAQQSNIAAASESVESVEIAEAPVIENLQQNPAASQIVQ 416 Query: 366 --PEPEVPRQSFAP-VAPTAVMTPTQVPP--QPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ QS +P V P + VPP + Q PQQ + P E + V Sbjct: 417 QEPKSADSVQSTSPSVEPLQRSAASSVPPPIERQPEPQQNQSAPPSEKIAPVAEVSHSRN 476 Query: 421 RVQ----GATKAKKSEPAAATRARPVNNAALERLASV--TDRVQARPVPSALEKAP---- 470 ++ AKK++ + V + E + + D+ Q + + P Sbjct: 477 MLRSHRLKRESAKKNQATTTEQPASVVASGAENVTAEFKADKYQMSGIDEDISSTPDLQG 536 Query: 471 -----------------------AKKEAYRWKATTPVMQQKEVVAT-------------- 493 E+Y+ P +E A Sbjct: 537 VNRNNAIADNLSAIQDNRVDQEIIPLESYQQDQFVPDSDNQEQPADYLSQTMSADYGESR 596 Query: 494 -PKALKKALEHEKTPELAAKL------------AAEAIER--------------DPWAAQ 526 P+ + + EK P +A + IER DPWA Sbjct: 597 GPENILENKREEKEPAVAENKDKSSTFLSDNIFVNDDIERAEIDPGKYVADKLSDPWALA 656 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHL-NNRGAQQKLAEALSMLKGSTVE 585 + ++ L LV+ +A N+ + + + L L+ Q+HL NN +L L + G+ + Sbjct: 657 IQKMRLVGLVKLLAKNSVMKIVEQQIVLTLKPEQQHLLNNHQLCTQLETKLKVHFGAQMS 716 Query: 586 LTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + + T E AIY+ L A+ +I D NI T + A++ E SI P+ Sbjct: 717 MYVEVGHVTGKLTAFESELAIYQTYLNNAKTAIKEDQNILTFVSEYGAKVYENSIIPL 774 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 257/640 (40%), Positives = 353/640 (55%), Gaps = 75/640 (11%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 LARKWRP+ FAD+ GQEHV+ AL+N L+ GR+HHAYL +GTRGVGKT++AR+LAK LNC Sbjct: 14 ALARKWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNC 73 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 E+G++ATPCG C C +I+ GRFVDL+E+DAAS T V++ R++LDN QYAP GR+KVY+ Sbjct: 74 ESGVSATPCGTCSACTQIDAGRFVDLLELDAASNTGVDNMREVLDNAQYAPTVGRYKVYI 133 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS+ +FN++LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + + Sbjct: 134 IDEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVA 193 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 L +L +E + EP AL LLARAA GS+RDALSLTDQAIA G G++ AV AMLGT+ Sbjct: 194 GHLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAMLGTV 253 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D L++A+ +G+ +M A RGI ++A L ++ LL ++A+V +P A+ + Sbjct: 254 RRDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQLALVLHAPGAVED 313 Query: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMP 364 A R R A + +QLYYQ L GR++LPYAPD G MTLLR LAF P Sbjct: 314 --GADAERTRAAAEKLDAETVQLYYQIALNGRRDLPYAPDEFSGFCMTLLRMLAFAPATD 371 Query: 365 LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG 424 P P P APVA P A AA LQ+ + Sbjct: 372 -PTPRSPGGGRAPVASADSTPAAAPLAAPAPA-------------RVPAAAPAPLQQPEA 417 Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 A + +EP AA A AA A A A +W Sbjct: 418 ARQVASAEPLAAEDADSPRAAAAPPDAPFVAAEPA--------------PAAQWDWL--- 460 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA- 543 A V+ L L + + +A + Sbjct: 461 ----------------------------------------AVVAGLRLGGMAKMLADHCE 480 Query: 544 WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWR 603 ++ ++V L + + +HL +R Q +L AL G +++T + A +TP + R Sbjct: 481 LVAQTGDSVTLRVGEAHKHLLDRAYQDRLTGALREKYGPALQITFEVG-SAADQTPQQVR 539 Query: 604 QAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I E + A+A +I AD ++ L F +++ +I+P+ Sbjct: 540 TRIKEARQAEAIAAIEADPFVRELVEQFGGQVEASTIQPL 579 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 255/684 (37%), Positives = 359/684 (52%), Gaps = 47/684 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL++ L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFNELVGQNHVSRALSSALESGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGVTSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E IA + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITKHLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + E+V L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPELG 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 I ++ +L++ I D+QLYYQ GR +L A + G EM +LR LAF P Sbjct: 302 LKYSEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQLAVTQEQGFEMCVLRLLAFRPL 361 Query: 363 MP----LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL------------- 405 P + EP + T ++ P P + + P Sbjct: 362 APNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEPEPEPE 421 Query: 406 PETTSQVLAARQQLQRVQGATKAKKSEPAAATRAR--PVNNAALERLASVTDRVQARPVP 463 P+ ++ + G A E + PV L ++ + T Q P P Sbjct: 422 PQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQIEPEP 481 Query: 464 SALEKAPAKKEAYRWK-ATTPVMQQKEVVATPKALKKAL-------------------EH 503 ++ + EA + + ++V+ P K++L Sbjct: 482 ASTAEPIGLFEASNAEFSLAQDTSAYDLVSEPVIEKQSLVQAEIVETVAVVKEPNATDNS 541 Query: 504 EKTPELAAKLAAEAIER----DPWAAQVSQLSLPKLVEQVALNAWKEES-DNAVCLHLRS 558 + P+ KL ++ +E + W L V+++A + H+ Sbjct: 542 QLMPQDILKLPSQTLEGEWTLEKWEFWFRNSQLSPAVQELAQHGVMTGEIGGNTVFHIPQ 601 Query: 559 SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESI 618 ++ QQ L EAL +T + T+ TP + E+ +A E + Sbjct: 602 EYENMLT-QLQQALIEALKQQWPNT-QFTVEYGAV-NTATPYVMQSVRKEKAFHRATELL 658 Query: 619 IADNNIQTLRRFFDAELDEESIRP 642 I++L FD EL ++P Sbjct: 659 QQQPVIKSLIETFDGELQNIQLKP 682 >UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPQ1_9PAST Length = 741 Score = 551 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 273/743 (36%), Positives = 382/743 (51%), Gaps = 102/743 (13%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQ H+L AL+NGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQSHILIALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCVNGVTAEPCGECEHCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI LE IL +E I + AL+ LA+AA+GS+RD+LSL DQAIA +G ++ V+ M Sbjct: 181 TQIAQHLEFILKQESIPFDFLALEKLAKAAQGSIRDSLSLADQAIAMSNGNITLNVVNEM 240 Query: 241 LGTLDDDQALS---------------LVEAMVEA---------NGERVMALI-------- 268 LG LDD+QA+ +++A+ E + + I Sbjct: 241 LGLLDDNQAIDILYTLQQGNGENMMKIIQAIAEKGSDWDLFLRDIAEKLHQIAVKQLLPK 300 Query: 269 NEAAARG-IEWEALLV--EMLGLLHRIAMVQLSPAALGNDMAAIELRMREL-ARTIPPTD 324 + +++ A L+ + L +++ + A + I + M L A P Sbjct: 301 DRLDESNQLDFLATLITPDDLQFFYQVIVAGRKELAF-SPTPRIGVEMTLLRALAFHPKL 359 Query: 325 IQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA---LAFHPRMPLPEPEVPRQSFAPVAPT 381 I + + ++ VEM +L + + Q+ + P+ Sbjct: 360 INSNIVESTQPQSSVSSVNNQTAYVEMPVLSQNIKSQYASNLNTRTVPKTAQNTSQQIPS 419 Query: 382 AVMTPTQVP--PQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG---------ATKAKK 430 + + P +P +S Q E+ S+ A + L + + KK Sbjct: 420 SNVVPNNMPAVDAQRSYSQPITLKNTVESDSEYSVALEALAELDKLDNTSLSSLQKEKKK 479 Query: 431 SEPAAATR--ARPVNNAALERLASVTDRVQARPVPSALEKAPAK---------------- 472 S+ + + R + E A + S +K P+K Sbjct: 480 SDVVSLQKTIDRVTEETSPEMTALPVIETKPFEQKSFTQKQPSKLLKSSTQPRMIVSNSI 539 Query: 473 -------------------------------KEAYRWKATTPVMQQKEVVATPKALKKAL 501 E YRW+ + P + + + TP LK++L Sbjct: 540 DISEESVEVRQSAVENEIEIDSDEVAEGENLAETYRWEWSNPELAKMQDGPTPSELKQSL 599 Query: 502 EHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQ 560 E + TPEL K+ + + D W V L + L +++ALN E+S V L + + + Sbjct: 600 EKDITPELREKVILLSRKEDVWTNIVESLDINNLTKELALNCALIEKSGGRVTLGIHTEK 659 Query: 561 RHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIA 620 HL R + L E L+ +EL I D +TP ++ + Y+ +A+E + Sbjct: 660 SHLEKRTFVKNLTEELAKYYAEQIELEIRVSDE-ITQTPTDFYRQTYKMLREKAKEDLQQ 718 Query: 621 DNNIQTLRRFFDAELDEESIRPI 643 D +Q F+ ELD S++P+ Sbjct: 719 DKKLQLFLTEFNGELDLASVKPV 741 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 256/655 (39%), Positives = 346/655 (52%), Gaps = 85/655 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++FA++VGQ HVL AL N L R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFAEMVGQGHVLQALTNALDQSRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++TPCGVC C EI+QGRFVDLIE+DAASRT V+DTRDLL+NV YAP RGRF Sbjct: 61 ALNCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHM S+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+L+AL + Sbjct: 121 KIYLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRALPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +L +E+IA EP AL L+A AA GS+RDALSL DQAIA G++ T VS + Sbjct: 181 SQIQQHLADVLQKENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFTGGKLDTVQVSQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +++A+ + + +R+ AL++EA R +E LL + + +H++AM Q + Sbjct: 241 LGLSDHQIIWDMIDALYQQSADRLFALVDEALDRAVEPAILLAQFIESIHQLAMGQWIQS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++I P +QL+YQ GR+++ ++P+ R+G+EMTLLR LAF Sbjct: 301 MSAAANPPPDE-----LKSIDPQLLQLWYQIATTGRRDMAWSPNARIGLEMTLLRMLAFQ 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P V A + A P + V AA+ + + Sbjct: 356 PGGEASNGAV------------------------KATEPAAVHSYPSDSRSVSAAKTKPE 391 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 RV + +SEP R+Q E A+ + K+ Sbjct: 392 RVASSITQPESEPETKA------------------RLQKSAEHRVAEPMVAQTMPVQDKS 433 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 V + L E ++ + +A Sbjct: 434 DHDVPDHSG------HARAQLTDLPWHEWVERIPGQPG------------------RNLA 469 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR--- 597 D + L + + N A++ L LS T ++ I+ N Sbjct: 470 DRCHINIVDGQIQLVVAPQYEVIANARARESLLSQLSK-LADTSKVKIIIGQNDTASDRA 528 Query: 598 ----------TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP E R Q R+S++ +Q L+ A+L EESI P Sbjct: 529 TSEISAQAAITPAERRNQEEINLQQQRRQSVVQHPVVQLLQEQAGAQLVEESILP 583 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 249/530 (46%), Positives = 331/530 (62%), Gaps = 12/530 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++VGQ HV AL N L+ R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GI+A PCG C +C++IE GR++DL+EIDAASRTKVEDTR++LDNVQYAP RGR+ Sbjct: 61 SLNCDEGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+L AL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ QLEH+L E + + AL+++A+AA+GS+RDALSLTDQAIA +G ++ QAV M Sbjct: 181 SEIKTQLEHVLTHEKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + SL+ A++ +G +M + A+R + ALL +++ L H + QL P Sbjct: 241 LGLMDTHYSQSLLAALLAQDGAALMKEVANVASRNPNYVALLDDLIALTHLTQLSQLVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A D + + +A+ P IQ+YYQ LL G+K+L +AP+ R+G EM +LR LAF Sbjct: 301 AAALDETNADY-ITHVAQNTNPQQIQIYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFQ 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + QS PVA + + PLP T + Q+ Sbjct: 360 P--------IDTQSQQPVAVNTQPVQSNTTKASALRDILNKSKPLPSTAQNNDTTQPQII 411 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVT-DRVQARPVPSALEKAPAKKEAYRWK 479 + A AK SEP NN++ + S T V+ P+ + P EA + Sbjct: 412 EPKPADVAKLSEPQNVAPDPLNNNSSTTQHVSTTVPAVEQAVEPTIVSAVP--NEAASEQ 469 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 T Q V +A +++ + + + + A D ++ V Q Sbjct: 470 LVTQQHQHTNDVTDEQAQRQSEDEAYLQQSNLEHSLAAQFDDVISSAVDQ 519 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 106/278 (38%), Gaps = 19/278 (6%) Query: 384 MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVN 443 + Q + A T P T + + Q + A ++ A Sbjct: 566 SNAKETEQQNTANLSSANTRPSRFTANSSNSNEQNVTTNSDAINHSRANNNAQQTHADNP 625 Query: 444 NAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVAT---PKALKKA 500 A +++ P+ + KA ++ + + K T L + Sbjct: 626 PPWPNDFAGESEKKPQLPLAGSQNKAASQAQFESKPERKIDFKAKHQTITENLAPELLEQ 685 Query: 501 LEHEKTPELAAKLAAE---------------AIERDPWAAQVSQLSLPKLVEQVALNAWK 545 + +K PE+ + A ++D WA + ++ L + Q AL++ Sbjct: 686 INPQKVPEVVVAQPSIPAPDDFQSPISEIRFAHQQDEWAYLIKRMGLGGRMRQFALHSIF 745 Query: 546 EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQA 605 + N + + + SQ+HL+ +Q+L ALS + V L+I + +P +Q Sbjct: 746 TKQGNNLHIDVDESQKHLDTPMLRQRLDAALSSIYEHNVTLSINFA-KGVIDSPYLIQQK 804 Query: 606 IYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I + QA + I +D+NI ++ F AE+DE SI+ + Sbjct: 805 IDAGRHQQAIDVITSDDNIVQFQQLFSAEIDENSIQAL 842 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 271/555 (48%), Positives = 343/555 (61%), Gaps = 21/555 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F VVGQ+HVLTAL N L R+HHAYL SGTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPHNFQQVVGQQHVLTALVNALEQDRLHHAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+TPCG C C EI+QG +VDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEKGITSTPCGECSTCVEIDQGCYVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRCLQFHLK L Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCLQFHLKCLTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL+ EH +E AL +A+AA+GS+RDALSLTDQA++ G G+V Q V M Sbjct: 181 EQISQQLVHILSREHCQYELSALNSIAKAADGSMRDALSLTDQALSHGAGEVLYQTVLDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L L+ +V + + MA I E ++ G +++ L VE+ LLHRIAM Q+ P+ Sbjct: 241 LGTLDHSHMLQLLRLIVSGDANKCMAKIAEVSSLGPDFDQLHVELASLLHRIAMAQILPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ + +++ L + P D+QLYYQ L GRKELP APD R +EMT+LR LAF Sbjct: 301 SVVD--TEHADKVKALCDDMSPEDVQLYYQITLTGRKELPLAPDPRSALEMTILRMLAFR 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQV-PPQPQSAPQQAP---------TVPLPETTS 410 P+ L PE + APVA +T T + P Q+ QAP + P Sbjct: 359 PQGRLQAPE-RDVTPAPVAIAPAVTETIIAAPVEQTVVSQAPVQATTPAVMPIAAPVPAQ 417 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 A QQ+Q+ + + PAA R V N LE+ + +QA +E Sbjct: 418 IQQQAPQQVQQPVPESMPQPVAPAAEQRDEAVTNLNLEQN----ELLQAAQAMGHVEPKT 473 Query: 471 AKKEAYRWKATTPVMQQKEVVATP----KALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 ++ + P + + TP ++ P A +A ++++ Sbjct: 474 VTPQSVEQQTADPQSVEPQNYVTPQIESPSVAPQDYAAPQPINTAPVAENSVDQGRKTRN 533 Query: 527 VSQLSLPKLVEQVAL 541 + L ++ A Sbjct: 534 FLRSRLGTTAKKSAA 548 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 5/269 (1%) Query: 378 VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAAT 437 A + + VPP+ P T + + + Q Q+ Q + E Sbjct: 548 AAKSEQAPSSYVPPKKAVTPVIQHTPAMQSRFNAPASQPMQQQQAQQQSAPAWQELPPLD 607 Query: 438 RARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL 497 + N + + D+ Q E + + + A + + +V L Sbjct: 608 SYQDQGN--FQGQGNYQDQDQGGYHNQMPEPSAYPAQGFAEPAIRQIDRFSQVKVDINDL 665 Query: 498 KKALEHEKT---PELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCL 554 A + +K+ A E DPW ++Q+SL V Q+AL++ E+ + L Sbjct: 666 SPAFQAQKSGKSTATAPLDNKLRDENDPWCCYINQMSLGGRVRQLALHSVMEQEPGRITL 725 Query: 555 HLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQA 614 + QR+ N ++Q+L++AL + VEL I +N TP + + IY+++LA A Sbjct: 726 TMNPDQRYFANDKSRQQLSDALQQVLSEPVELVINFGENLNKSTPAQLEEIIYQQRLANA 785 Query: 615 RESIIADNNIQTLRRFFDAELDEESIRPI 643 +++ D IQ A +D+ SI P+ Sbjct: 786 TKNLYDDKYIQFFMNRLGAVIDDSSIVPL 814 >UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibrionales RepID=B7VL96_VIBSL Length = 752 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 281/653 (43%), Positives = 372/653 (56%), Gaps = 49/653 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP F +VVGQ HVLTAL N LS R+HHAYLFSGTRGVGKT+I RL AK Sbjct: 1 MSYLALARKWRPTKFKEVVGQAHVLTALENALSQNRLHHAYLFSGTRGVGKTTIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGIT+TPCG C C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGITSTPCGECATCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+HIL +E++ EPRAL ++A AA+GS+RDALSL+DQAIA G+G V T V+ M Sbjct: 181 DNIHEQLDHILEQENVTSEPRALGMIAHAADGSMRDALSLSDQAIALGNGNVVTDTVAHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ L+EA+ ++ MA I A G+EW+ LL ++ LHR+AM Q P+ Sbjct: 241 LGTLDTDQAIHLLEAISSKQPQQAMACIQALAENGVEWDGLLSQLATQLHRLAMYQALPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L E R+ +++T+ P DIQLYYQ +L GR++LP +P R+G+EM +LR LAF Sbjct: 301 TLDKAQPDAE-RLELMSKTLSPQDIQLYYQIVLKGRQDLPLSPTARVGIEMVVLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + QS +P A P Q Q + Q+ + P+PE QV + + Sbjct: 360 PAEQTVATAISTQSTSPAPAPAAQNPVQNQVQGVA---QSMSQPVPEPRQQV---QAPVG 413 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + + + + + + Q P AY + Sbjct: 414 SQPQVQQQAPVQQPVQQQQQNPAQYSDSQGYADHSGNQGYPEQDYPHSQYDVPPAYDERP 473 Query: 481 T----------------TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWA 524 + +PV Q +TP ++ +P + + R A Sbjct: 474 SYGADQPQQQQTNYQSQSPVQQPSAAPSTPPVSQEQPARATSPVSGLRHQLRSQRRSS-A 532 Query: 525 AQVSQLSLPKLVE-QVALNAWKEESDNAVCLHLRSSQRHLNNRG-AQQKLAEALSMLKGS 582 A ++ S PK + A + + +Q+H + + L+ + + Sbjct: 533 ATDNKGSTPKKAKATSAKTSVLDRV----------AQQHGGSERVSPASLSASSTE---- 578 Query: 583 TVELTIVEDDNPAVRTPL-----EWRQAIYEEKLAQARESIIADNNIQTLRRF 630 + D+ P P E + + ++ +A E I + L + Sbjct: 579 ----KVTNDNEPYRWKPSKPVVKEVSKELTPTQIKRALEHIKTPEMVDKLLQE 627 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 9/267 (3%) Query: 381 TAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRAR 440 + V P+ P P + +Q P S + + +R AT K S P A +A Sbjct: 491 SPVQQPSAAPSTPPVSQEQPARATSP--VSGLRHQLRSQRRSSAATDNKGSTPKKA-KAT 547 Query: 441 PVNNAALERLASV----TDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKA 496 + L+R+A A S+ EK E YRWK + PV+++ TP Sbjct: 548 SAKTSVLDRVAQQHGGSERVSPASLSASSTEKVTNDNEPYRWKPSKPVVKEVSKELTPTQ 607 Query: 497 LKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHL 556 +K+ALEH KTPE+ KL E+I +D W+A + +L KLVEQ+ALN+ ++D ++ L L Sbjct: 608 IKRALEHIKTPEMVDKLLQESIAQDEWSATIQKLETAKLVEQLALNSVFAKNDTSITLTL 667 Query: 557 RSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARE 616 R+SQ HLN AQ +L ++L+ + G L++ + TPLE R+ +Y+ KL A Sbjct: 668 RASQAHLNTDRAQSELLQSLNTVLGEECHLSVEIGE--GGETPLELRERLYQGKLKDAFT 725 Query: 617 SIIADNNIQTLRRFFDAELDEESIRPI 643 ++ D N+Q + R F AELD +S+RPI Sbjct: 726 ALENDANVQFIERRFAAELDRDSVRPI 752 >UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EY35_DICNV Length = 665 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 229/662 (34%), Positives = 341/662 (51%), Gaps = 31/662 (4%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+TF ++VGQ+H+ AL+ L R+HHAYLF+GTRGVGKTS+AR+ AK L Sbjct: 2 YQVLARKWRPKTFRELVGQQHITQALSYALDHDRLHHAYLFTGTRGVGKTSLARIYAKSL 61 Query: 63 NCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC G +A PCG C++C EI+QGRF DLIE+DAASR +++T++LLDN+ YAP +GR+K Sbjct: 62 NCLINGTSAQPCGQCEHCLEIDQGRFPDLIEVDAASRRGIDETKELLDNLPYAPVKGRYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM +R SFNALLKTLEEPP HVKF+LATTD QK+P T+LSRCLQFHLK ++ E Sbjct: 122 VYLIDEVHMFTRESFNALLKTLEEPPPHVKFILATTDIQKVPTTVLSRCLQFHLKNINPE 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 Q+R L HIL E I +E AL LLA+AA GS+RD LS DQAIA G G V T V+ +L Sbjct: 182 QLRQHLAHILQVERIDYEAEALVLLAQAARGSMRDGLSFLDQAIAYGQGVVKTDDVAYLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + Q L+ + E++ V A++ E A ++ +L + L +I + QL Sbjct: 242 GAVPTAQIYRLLTKIAESDARAVRAILTELDAFSPDYMDVLRHVFQGLQQITVAQLQAQQ 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 N+ I+ + LA+ +P +QL+YQ + + +PY PD R+ +EMT LR +A P Sbjct: 302 NPNE---IDQTLVRLAQQLPVELVQLWYQIISDAWQSMPYQPDMRVALEMTFLRMIALQP 358 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQ--SAPQQAPTVPLPETTSQVLAARQQL 419 +P E + + P V P + + +AP ++ +P+ L Sbjct: 359 LLP--ETTISEKHIIPEPDNDVDLPPWRDDESEMNTAPLESSENDVPDNNDVDLPPWHDD 416 Query: 420 QRVQGATKAKKSEPAAATRA-----RPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + T + A P + LE + + VP+ + Sbjct: 417 ESEMINTAPAEPLENDAPDNNGVDLPPWRDDELEMMNTAPAEASENDVPNDNDADMPPWR 476 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP------------ 522 + + P L EL + Sbjct: 477 DDELEMINTAPLESSENDVPDNNDVDLPPWHNDELEMNTVPLKSSENKSVIQLEQAVNQL 536 Query: 523 --WAAQVSQLSLPKL-VEQVALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSM 578 W+ ++ L + + ++ + + ++++ L + S+ N L LS Sbjct: 537 QLWSQFLNTLPVEDVFLQSLVEQSIPVSFQNDSLQLAVLSAAASWVNEQRLADLTRILSA 596 Query: 579 LKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEE 638 + ++I DD + T RQ ++ A++ ++ + ++TL F ++ + Sbjct: 597 SCARKIAVSITFDDT--IATSAMLRQQESDQMHQMAKQKLLQNPVVRTLMTDFHGKIMRD 654 Query: 639 SI 640 SI Sbjct: 655 SI 656 >UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobacteria RepID=Q47HW9_DECAR Length = 537 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 240/533 (45%), Positives = 319/533 (59%), Gaps = 8/533 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+ +VGQEHV+ AL + LS R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C C+EI+ GRFVDL+E+DAA+ T+V++ R LL+N YAP RGRF Sbjct: 61 SLNCETGITATPCGTCSACQEIDSGRFVDLLEVDAATNTRVDEMRQLLENAVYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYVIDEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L HIL E I + AL L+AR+A GS+RDALSL DQAIA G G+V V +M Sbjct: 181 LAITGHLGHILQAEGIPFDQPALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D D +++EA+ A ++ + + R + + A L E+ LL R+ + Q P Sbjct: 241 LGTVDQDYLFTILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D + R++ LA + P +QL YQ + GR EL APD G MTLLR F Sbjct: 301 AIDDDEPERD-RLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYAGFVMTLLRLYTFR 359 Query: 361 PRM--PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + VPR + A P AV + S P+ LP S + Q Sbjct: 360 PSTVADVVGAAVPRVNAAGAMPKAVRATPATQSRGDSIPEPVIIPKLPPIASGEMDWHQI 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVN-NAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 + + + A+ E A R ++ N L RL+ +Q RP P L++A + Sbjct: 420 VASLSLSGLAR--ELAQNCELRQLSENQCLLRLSPAQGHLQMRPNPDRLQQALSDFFGRP 477 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQL 530 + + Q + TP E+ A +A + RD + + L Sbjct: 478 LQVRIELAQNEN--VTPAETVGRQRQEQQERAATAIAQDTFVRDVIESFDASL 528 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 184/618 (29%), Positives = 283/618 (45%), Gaps = 52/618 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+VLA K+RPQTF +VVGQ HV T L N + GR+ HA L +G RG GKT+IAR+LAK Sbjct: 1 MSYRVLALKYRPQTFDEVVGQPHVTTTLKNAILSGRVPHAILLTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCETG T TPC +C C I G VD+ EID AS V+ R+L +NV Y P+ +F Sbjct: 61 AMNCETGPTPTPCNICKTCTNITAGSAVDVFEIDGASNNSVDQVRELRENVAYMPSSSKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP+HV F+ ATT+ K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTEVHKIPVTILSRCQRHDLGRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI---------ASGDGQ 231 QI L + E + + LLA A+GS+RD+LSL D+ + SG Sbjct: 181 AQISAHLMTLAAAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQAQTSEQTSGPRA 240 Query: 232 VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 + + LG +D L +A+++ G ++ L++ G++ + ++ Sbjct: 241 IDDDKILGTLGIIDKTLVFDLADAIIQNRGADIIDLVDRIHTLGLDLKRFYASLIRHFRN 300 Query: 292 IAMVQLSPAALG--NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGV 349 +A+V++S + RM L + + + TLL+ + + R V Sbjct: 301 LAVVKVSSNDKNTCDISDHDRQRMAALTAPLSQSFLNQILNTLLVDESLVKLSSHTRTAV 360 Query: 350 EMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 EM LL+ + P + E ++ + +A Q PQ + P P PE Sbjct: 361 EMVLLKLVQIRPGI---EIDLMIKRLDDLARRFDNPDFQALPQEER-----PVCPPPEPR 412 Query: 410 SQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + +P +P + V + P P A Sbjct: 413 KAPTSMDPHPISDDNGESVPAPQPGTTPSYKPTDRI----------NVVSPPTPEPRTIA 462 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 P + A RW + A+ K L+ ++ +L A +R ++ Sbjct: 463 PPEDPAGRWNPFLKALADSLPFASAILSKGRLQKISNTDIVVELNGTAFDRGRIESKR-- 520 Query: 530 LSLPKLVEQVALNAWKEESDNAVCLHLR---SSQRHLNNRGAQQKLAE----------AL 576 +E V + + + L L + + + N+ + KL + A+ Sbjct: 521 ----GEIETVCHDYF----GKPLHLTLIGDCAPKEYGNDEKSPAKLRQEILNHPLVADAI 572 Query: 577 SMLKGSTVELTIVEDDNP 594 G+ V++ + E NP Sbjct: 573 KRFNGTVVDVKLNERSNP 590 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 234/537 (43%), Positives = 328/537 (61%), Gaps = 19/537 (3%) Query: 1 MSY-QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS QVLARKWRP+ F ++ GQEHV+ AL N L R+HHAYL +GTRGVGKT+IAR+LA Sbjct: 1 MSQTQVLARKWRPRNFTELTGQEHVVRALTNALEQNRLHHAYLLTGTRGVGKTTIARILA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 K LNCETGITATPCG C C +I+ G F+DL+E+DAAS T+V++ R+LL+N YAP GR Sbjct: 61 KSLNCETGITATPCGTCTTCVQIDSGSFIDLVELDAASNTQVDNMRELLENALYAPTCGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTD QK+P+T+LSRCLQF+LK + Sbjct: 121 YKIYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPITVLSRCLQFNLKQIP 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 QI L+ IL +E I + +LQL+ARAA+GS+RDALSL DQAIA G G++ +V Sbjct: 181 QPQITDHLKKILAQEKIPCDILSLQLVARAAQGSMRDALSLLDQAIAFGAGKIEEASVRD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG +D L++A+ + NG ++++L +E AR + ++ L ++ +LHRIA+ Q P Sbjct: 241 MLGIIDHSYLFDLLDALTQKNGLKLLSLADEMEARCLSFDCALQDLAVILHRIALAQAIP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 ALG D+ +R+ LA+ + P DIQL+YQ L GR +L APD G MTLLR L F Sbjct: 301 QALGEDIPDY-IRINALAKILAPDDIQLFYQIALHGRGDLSLAPDEYAGFTMTLLRMLTF 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 +PE V Q V+ ++ +V +PQ P P VP + L Q + Sbjct: 360 -----MPEDLVAHQQPPQVSSISIPQSVEVGHEPQPIPDITPPVPADNSD---LPWPQLV 411 Query: 420 QRVQGATKAK---KSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q+++ A AK + A A + E + ++ + SAL K A Sbjct: 412 QQLKLAGMAKMLAQHSEAKILSADKIELCVPEVHKHLLEKKYQDKIQSALNTFFGKLVAL 471 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 + TP A+++ E EK + A + + + ++ ++L +P Sbjct: 472 DF------FVGSITGLTPAAIQQRAEEEKQAQAIAAIEKDPVVQELIEQFDAKLIIP 522 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 3/160 (1%) Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW 544 Q ++ P++++ E + P++ + A+ + PW V QL L + + +A ++ Sbjct: 370 PPQVSSISIPQSVEVGHEPQPIPDITPPVPADNSDL-PWPQLVQQLKLAGMAKMLAQHSE 428 Query: 545 KE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWR 603 + S + + L + +HL + Q K+ AL+ G V L + TP + Sbjct: 429 AKILSADKIELCVPEVHKHLLEKKYQDKIQSALNTFFGKLVALDFFVGSITGL-TPAAIQ 487 Query: 604 QAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 Q EEK AQA +I D +Q L FDA+L SI+PI Sbjct: 488 QRAEEEKQAQAIAAIEKDPVVQELIEQFDAKLIIPSIKPI 527 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 249/527 (47%), Positives = 336/527 (63%), Gaps = 21/527 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L + Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + ++ A++LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D+ + L++A+ + + + +M + + + G + +L +L LLH+I + Q +P+ Sbjct: 241 LGTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ +++ A+ + P +QLYYQ LL GR++LP+APD + G+EM LLRA+AF Sbjct: 301 AA--QLSQYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMALLRAIAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ Q + A + ++ P P+ APT P+ T + + + + Sbjct: 359 PEAPV-------QRWMGEAGSEILLPDTPLPELGKGEDVAPTSARPDGTVKPVKPAESVL 411 Query: 421 RVQGATKAK-KSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 Q + + K+E + N A++ L+ + + P + Sbjct: 412 NSQAEAEVEDKAEVEEKAKVEASNEASVAMLSDAQASTAEQTNKLSDTDGPFEANLVAVD 471 Query: 480 ATTPVMQQKEVVATPKA-----------LKKALEHEKTPELAAKLAA 515 +K+ + + L +A +PEL+A+L+ Sbjct: 472 LVEADSTEKDALEEDEGALDLFAEQQLILSQAQSKGHSPELSAELST 518 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 5/259 (1%) Query: 382 AVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARP 441 P V P+P AP+ +P QV + R A + ++ + + Sbjct: 832 DEDRPPWVSPEPSLQAVTAPSDEVPNLAGQVDTQSESHARADAAAQIEQGLDELSLEDQS 891 Query: 442 VNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKAL 501 +++ +L+ + + + E+ + + V+ P A+ + + Sbjct: 892 LDDQSLDDQS-----LDDQSSEDLNSDDQGSNESGAFGNHPVQSPAAQEVSAPSAVTEPV 946 Query: 502 EHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQR 561 A W +S L + V Q+A+NA + + L L+ +Q+ Sbjct: 947 SQTTQVAFVADEITGHDTDLKWYRLMSALEIGGRVRQLAVNAVCKAFSEPLPLVLKPNQK 1006 Query: 562 HLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIAD 621 HL GA +L +ALS G + ++ P TPLE RQ + E L QA + ++ D Sbjct: 1007 HLAAPGAISQLEDALSKALGGSCQVAFSVGVEPERETPLEIRQRFHRELLEQAHQGLLQD 1066 Query: 622 NNIQTLRRFFDAELDEESI 640 NIQ L + AE++ +S+ Sbjct: 1067 ENIQWLTQVMQAEMEPDSL 1085 >UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderiales RepID=Q13Z80_BURXL Length = 957 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 216/500 (43%), Positives = 291/500 (58%), Gaps = 3/500 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+TPCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LEHIL EE + ++ +AL+LLARAA+GS+RDALSLTDQAIA QV+ +AV M Sbjct: 181 GHIVSHLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ + +G V+++ +E A R + + L ++ LLHRIA Q +P+ Sbjct: 241 LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + +QL+YQ IGR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEAGD-LRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFE 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P V + T P V + A Sbjct: 360 PAPTGGGGAVGAARAPGQSGAGGARRTGAPAVAAQQGASGSPVSQARAVAASGAVPGTSF 419 Query: 421 RVQ--GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 Q A ++++P A + T V + A +A Sbjct: 420 EAQVSAAAPGRETQPGNVVVADKGAVVGAVSVEPATRAVAQAGSTVEVPPAVGDVQAAAA 479 Query: 479 KATTPVMQQKEVVATPKALK 498 + + + A P + Sbjct: 480 DSAQGAVAGQSPAAEPATVA 499 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 7/144 (4%) Query: 501 LEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSS 559 ++ P A L + D W A L L + Q+A N+ N + L++ Sbjct: 807 IDQRPLPP-AVPLDPLGFKGD-WPALAVDLPLKGISYQLAFNSELMALEGNTLKLNVPVP 864 Query: 560 QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESII 619 Q KL AL+ G TVE+ + PA RT A+ ++ +A I Sbjct: 865 QY--AEASQVAKLKTALADRLGHTVEVLVEVG--PARRTAAAHDAAMRAQRQQEAEREIG 920 Query: 620 ADNNIQTLRRFFDAELDEESIRPI 643 AD +Q+L R F A + SIRPI Sbjct: 921 ADPFVQSLIREFGASIVPGSIRPI 944 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 256/538 (47%), Positives = 329/538 (61%), Gaps = 20/538 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGR+ Sbjct: 61 GLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L E + E AL LLA+AA GS+RDALSLTDQAIA G GQV + V M Sbjct: 181 DEISDQLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ Q ++L+EA+ +A+ +M + + G E E +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A M+ +++ A+ + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+ F Sbjct: 301 AA--QMSLYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVTFV 358 Query: 361 PRMPLP----EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 P P+ + AP + PQ APQQ +V AA Sbjct: 359 PEQPVSKWVTDSPAAIAIPQAAAPAITQSSESAKPQAIVAPQQ-----------EVKAAP 407 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + S PV L+ + + PV S LE ++ Sbjct: 408 VEEAAEKKTVLTANSVNDKQPNQDPVAADTLKPELAAIEASVGAPVSSTLESMNSEMAVI 467 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP---WAAQVSQLS 531 +A + + T + + E P + A+ A+ D ++ QL Sbjct: 468 LSQAQSQGFSSSDTSETKDISTEQTQSEVKPPVKAQQPADTSTSDDATEISSIAEQLP 525 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 11/275 (4%) Query: 366 PEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGA 425 P+ ++S A P A A + + + A + + Sbjct: 655 PQESSAKKSVAERKPFAPPVRKPKAEPEIDNSDPATVGAKSDQAQENIKAANADNQEETF 714 Query: 426 TKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVM 485 + EP A ++ A+E+ A+ +A+E + + + + Sbjct: 715 DRPPWEEPHAQDPTPRFDDVAVEKEANKAADN------AAVEPKRTPQPQNQTEQQSKPP 768 Query: 486 QQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK 545 + + ++ L + E+ W ++ L + V Q+A+N+ Sbjct: 769 VTSLDSTSVQDVELNLPALPSGEITGNDIDL-----KWYRFMADLEVGGRVRQLAVNSVC 823 Query: 546 EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQA 605 + + + L L+ Q+HL A ++L EA+S G E+ I + + TPLE R+ Sbjct: 824 HQFEQPLSLLLKPDQKHLGADVAIKQLEEAMSKALGEPSEVRISVGVDSSRETPLEVRRR 883 Query: 606 IYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++E LAQA +I D+N++ L A+L +S+ Sbjct: 884 FHKEILAQAHHGMITDDNVRWLSENMGAQLTPDSL 918 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 248/515 (48%), Positives = 328/515 (63%), Gaps = 8/515 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA++A GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYS--AQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ-APTVPLPETTSQVLAARQQL 419 P + +V ++ +TP P A +Q A P+ E + + Sbjct: 359 PEKSVKRWQVDDAVKVDLSAQPALTPQATIPPEVPAERQLAVNAPVAEKKTLLATVANPE 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 ++Q T E A +N A + + + Q++ ++ + + A Sbjct: 419 AQLQAETT---PETALEDDEPELNAALIAEQQVILSQAQSQGFGASADPVVSSNTALNQD 475 Query: 480 ATTPVMQQKEVVATPKALKKALE--HEKTPELAAK 512 + + T + + + +LA + Sbjct: 476 VNSSDPTDPDTALTEQTATEDVLDAQNTAGDLAPE 510 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 69/296 (23%), Positives = 113/296 (38%), Gaps = 32/296 (10%) Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA---------PTVPLPETTS 410 P + P AP++ + VP QSA Q P P Sbjct: 703 KPELSTKATNAP---LAPLSTRPITHSIIVPSTQQSAAAQHLPLDPNDRPPWEDAPVAEC 759 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRA-----RPVNNAALERLASVTDRVQARPVPSA 465 A Q ++ + +AA A PV A L + T Q Sbjct: 760 HHGNAEPITTSRQVNEESHLRQESAALHAPLLAVEPVQVAPALTLPTNTQAAQVEQAAGQ 819 Query: 466 LEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWA 524 + E P+ L A +L + D W Sbjct: 820 SHQLNHPDEVPATP--------------PRELDAAAPPAPASDLTVAQSITGHPLDLHWY 865 Query: 525 AQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTV 584 ++ L + V Q+A+N+ + N + L L+ Q+HL + A ++L +AL+ G+ Sbjct: 866 KLMASLDIGGRVRQLAVNSICQVQSNPLPLLLKPDQKHLAAQVAIEQLEQALTAALGAPR 925 Query: 585 ELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++ +V +P+ TPLE R+ ++E L QAR+S+I D+N+Q L F AEL+ +S+ Sbjct: 926 QVEVVIGTDPSRETPLELRKRFHQELLQQARQSLIMDDNVQWLINRFGAELENDSL 981 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 248/502 (49%), Positives = 317/502 (63%), Gaps = 3/502 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYS--AQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPV-APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P+ +V + + A P QA TS V + Sbjct: 359 PEKPVKRWQVEDAAKVSLPAQQPSTIPAATEQAVNRVENQAEAEKKTPLTSTVDSQPAAT 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + VQ ++ S ++ A+ A V + Q + A Sbjct: 419 EAVQSGFMSEPSVADPTLPQPEISKASQASQALVAEAAQQLLSDEDVSAVDGDDTAGEES 478 Query: 480 ATTPVMQQKEVVATPKALKKAL 501 A + ++ V +A + Sbjct: 479 ALNAALIAEQQVILSQAQSQGF 500 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 113/285 (39%), Gaps = 14/285 (4%) Query: 369 EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKA 428 E+ A P V P P P E LA + + ++ Sbjct: 767 EIESLFEAQAGVINASLPAHVAPAPHPQFDPNDRPPWEEAPVDTLADVEPVATSYQGSET 826 Query: 429 KKSEPAAATRARPVNNAALERLASVTDRVQARPVPS----ALEKAPAKKEAYRWKATTP- 483 ++ + T + E + +P+ A K +E +A P Sbjct: 827 ARAPQVSQTPQPIIAPQEPELATGIAHSASIPTLPTDTGAANTKTANSEETRVEQAIAPH 886 Query: 484 ----VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP----WAAQVSQLSLPKL 535 Q + P A L A++I P W ++ L + Sbjct: 887 PQRDTAAQPVTQTQTPPQSSEETQQSAPSTALTL-AQSITGHPLDLHWYKLMASLEIGGR 945 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 V Q+A+N+ + N + L L+ Q+HL+ A ++L +AL+ G+ ++ +V +P Sbjct: 946 VRQLAVNSICQLQANPLPLLLKPDQKHLSAPVAIEQLEQALTAALGNPRQVEVVIGIDPT 1005 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 TPLE R+ ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 1006 RETPLELRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1050 >UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYC4_MARMS Length = 752 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 237/526 (45%), Positives = 326/526 (61%), Gaps = 13/526 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE GI+ PCG CD+CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGR Sbjct: 61 CLNCETNGISPEPCGTCDSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ L+ +L E + + AL + +AA GS+RDALSLTDQAIA G+G +S V+A Sbjct: 181 PQRVVDYLQTVLTTEEVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q L L+E++ N +V+ I + A ++ A+ +L +LHR+A+ Q P Sbjct: 241 MLGLVNQAQVLDLLESVASKNAAQVLTRIEQLADYQPDFTAICGSLLDVLHRVAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + + R++ +A ++ +IQ+ YQ+LLIGR++L A R G EM +LR +AF Sbjct: 301 GALMDQLGDL-ARIQAIAASVSSEEIQIMYQSLLIGRRDLHLAHSARAGFEMLMLRLIAF 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P+ V AV + Q+A + P P+ E + V+ +++ Sbjct: 360 RPAPPMVVSHNAPPVMN-VQTEAVPITSPDESMHQTAESEYPLQPMTEKKTPVV-KQEEP 417 Query: 420 QRVQGATKAKKSEPA--AATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 ++ A + + EP +A P + E +E+ + E+ + Sbjct: 418 VVIKPAEQMVEPEPVQESAQPTAPAEHPPWEYAPEPAA-----AEEYVVEQVAVESESAQ 472 Query: 478 WKATTPVMQQ--KEVVATPKALKKALEHEKTPELAAKLAAEAIERD 521 + +++ + L+++L+ E+ A E D Sbjct: 473 SEVIQHDIEEDVEITAVENSELEESLDVEQQTVSIALEPTARQESD 518 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 96/330 (29%), Gaps = 47/330 (14%) Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + EPE ++S P AP P + V + ++Q + Sbjct: 420 IKPAEQMVEPEPVQESAQPTAPAEHPPWEYAPEPAAAEEYVVEQVAVESESAQSEVIQHD 479 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA------- 471 ++ T + SE + + + + + E P Sbjct: 480 IEEDVEITAVENSELEESLDVEQQTVSIALEPTARQESDIQVETANKPEHEPKSFVVADD 539 Query: 472 ---------------------KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELA 510 + A P + + +E P+ Sbjct: 540 RFTEELLDESDEDEDEQEAEERAIADIVDPFNPAADLVDALGAEPIESSVVEESTEPDTR 599 Query: 511 AKLAAEAIERDP------------------WAAQVSQLSLPKLVEQVALNA-WKEESDNA 551 + I + W +L L LV+ + +N+ + SD Sbjct: 600 LSKVPDTIAQPALGMPLPEMSHFNELTMKLWWLVAPRLPLTGLVQNILMNSSLVDASDQG 659 Query: 552 VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKL 611 V L + H+ N+ +++ ALS TV L I ++ T E+ + E L Sbjct: 660 VRLEVPLEYGHMLNQVRYEQIQGALSDFFAMTVPLIIDTVEDTTGVTAEEFAASKRAEAL 719 Query: 612 AQARESIIADNNIQTLRRFFDAELDEESIR 641 A + + +Q L A+L ++++ Sbjct: 720 QVAITHLNSHPVVQALSATMGAQLVYDTVK 749 >UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Tax=Marinomonas sp. MED121 RepID=A3YHQ6_9GAMM Length = 823 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 231/532 (43%), Positives = 313/532 (58%), Gaps = 12/532 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQNFIELAGQDHVLQALVNALKQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE GI+ PCG C +C EI +GRFVDLIE+DAASRTKVEDTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGISPEPCGTCGSCVEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYTPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 ++ + LE +L E ++++ L + +AA GS+RDALSLTDQAIA G+G +S V++ Sbjct: 181 PGRVVNYLEKVLTTEQLSYDEAGLWQIGQAANGSMRDALSLTDQAIAFGNGHISETDVTS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q + L++A+V+++ ++ L+N+ A ++ A+ +L LLHRIA+ Q P Sbjct: 241 MLGLVNQAQVVGLLDAIVQSDAANLLKLVNDLADYQPDFVAICASLLDLLHRIAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + + +++ +A+ +P IQL+YQT+LIG+++LP A + G EM LLR +AF Sbjct: 301 GALEDQLGDL-AKVKLIAQQVPSEVIQLFYQTMLIGKRDLPLAHSPKAGFEMLLLRLIAF 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ---PQSAPQQAPTVPLPETTSQVLAAR 416 P P + P + Q T P+ ++ A Sbjct: 360 RPAQATSVSTSPVALVTHTPESTSSASDASEPLIQNEIDSSVQEITAKYPDVKHEIDQAI 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA------LEKAP 470 V+ + K + +P+ N L+ Q + +P Sbjct: 420 SVATDVEKNLEPLKPLTNEPSTNKPLINKTLKGEGDKATIDQQGEQKDETLNVTAEKHSP 479 Query: 471 AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 + + T M K K L+ E A L ++ Sbjct: 480 VNSASASVSSQTTEMDTKPPF-EADEKPKVLDQAAAKEKMADLNKIMQDQGE 530 Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 101/288 (35%), Gaps = 17/288 (5%) Query: 357 LAFHPRMPLPEPEVPRQ-SFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 LA LPE +V + A TP Q+ QA E + Sbjct: 547 LAAKELDSLPEQDVEASLNEDDAAAQQRQTPASTGLSQQTQTDQALNNDASEDSG----- 601 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 V G+ + + +++ A++R A + +Q++ + + EA Sbjct: 602 ----LEVDGSEDGDLEDSDSEDDIELIDDHAMDRSAELVAVMQSQTIEVEEIAPITETEA 657 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA-IERDPWAAQVSQLSLPK 534 KA ++ + + E + + + W +L L Sbjct: 658 LVEKAIATNLEDVSY-----TKAQIIVQPALGEKVEPIDHFSKMTMQMWWLIAPRLPLTG 712 Query: 535 LVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 LV+ + +N E + + L + H+ N+ +++ A+S + V L I ++ Sbjct: 713 LVQNILMNSCMLEAGEQGIKLEVPLEYGHMLNQVRYEQIQGAISHYFDAVVPLIINTVED 772 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 + T E+ + + + +A E + A +Q L +L +S++ Sbjct: 773 VSGVTAEEFAASKRAQAMQEAIEHLNAHPIVQALSSTMGGQLIYDSVK 820 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 228/525 (43%), Positives = 315/525 (60%), Gaps = 15/525 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++ GQEHV AL N + GR+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE G+T+ PCG C +C EI++GRFVDLIE+DAASRTKV+DTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVYLIDEVHMLS SFNALLKTLEEPPEHV FLLATTDPQKLPVT+LSRCLQFHLK ++ Sbjct: 121 YKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHME 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + I L +IL +E I E AL+L++R+AEGS+RDALSL DQAIA G G+V + + Sbjct: 181 EQTISKHLAYILQQESIDFETPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRT 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLGT+D + L+EA+ + + + E + +++ L E+L +H++A+ Q + Sbjct: 241 MLGTIDHQFMVKLLEALANKDSAEAIKAVAEMSHYPVDFADALKELLSRIHQVAIFQSTG 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L +E + A I D+QLYYQ L R++L +AP R G+EM LLR LAF Sbjct: 301 VLLDQAAPYVE----DFASKIASDDLQLYYQMGLHARRDLEWAPSPRQGLEMALLRMLAF 356 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP--LPETTSQVLAARQ 417 L +V + + + + + QP+SA Q A P + + + AA + Sbjct: 357 R----LEPSQVVQNNSSQTSLDSEAKKKASLKQPESAAQPATVEPGLIENSALENNAAEK 412 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARP--VPSALEKAPAKKEA 475 + + EP +P + A + + T P P + + + Sbjct: 413 YSAPKTAPEQKLEQEPKQEREQKPEPSTAHKTVTEETQSFSDAPEEPPFNPDDYASFSDD 472 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER 520 + + + Q + P+ ++A + + K E + Sbjct: 473 EKTEESIVDQYQTASSSKPE--EQAAQASSNTVIENKTVKENTAQ 515 Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 101/285 (35%), Gaps = 28/285 (9%) Query: 384 MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAK-------KSEPAAA 436 T + P+ Q+A + TV +T + A ++ A+ + Sbjct: 484 QTASSSKPEEQAAQASSNTVIENKTVKENTAQASSNEQAALASLHSALGLNFSDDADSDR 543 Query: 437 TRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTP------------- 483 ++ + E + + E + + +R + P Sbjct: 544 APSQKIEQPVQEEVVETGQTETGESESTQNEPEQSNDDEFRLQPVQPIEEEAEAESEPAT 603 Query: 484 ----VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP--WAAQVSQLSLPKLVE 537 +Q V + +LE E A + + + WA V ++ L Sbjct: 604 SPKLAQEQVSSVDEISLQETSLEKTVLVEAALEESGPPATEEALQWAQHVKKMDLTGTYH 663 Query: 538 QVALNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 Q+A ++ + +D+ + L + +Q L+ A+Q + EAL+ ++++ + P V Sbjct: 664 QIAQSSTVKWLTDDKIQLTVEPTQDILSTDTAKQAIEEALAQYFSKSIKIEWQFAE-PDV 722 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 TP Q + K +A E I Q L + F A LD+ SI+ Sbjct: 723 ATPAMIWQRAAKAKHRKACEMITQHPFAQQLAQKFAATLDKNSIQ 767 >UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=Q6FAW7_ACIAD Length = 711 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 249/710 (35%), Positives = 349/710 (49%), Gaps = 83/710 (11%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL + L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFIELVGQNHVSRALTSALERGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETGIT+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGITSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E I + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITSHLTTILAKEQIEADKDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + RV L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAIHQNQTARVSQLLMQFRQQALDVSLVLDQLISTLHELALLQYLPELS 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 I ++ +LA+ + D+QLYYQ GR EL + + G EM +LR LAF P Sbjct: 302 LKYSEEINQKILKLAKIVSAQDLQLYYQIACKGRSELQLSVTQEQGFEMCVLRLLAFRP- 360 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPT---QVPPQPQSAPQQAPTVPLPE--------TTSQ 411 + + E V S + P + +S Q P+ SQ Sbjct: 361 LSIDEVTVHASSQPSELQINQLPPAADSETDSSSRSELQHTNNRIEPDLEGSVVISVISQ 420 Query: 412 VLAARQQLQRVQ------GATKAKKSEPAAATRARPVNNAAL-------------ERLAS 452 + + Q V K ++++ ++ L + + Sbjct: 421 EAESFEAEQVVNHTTDDCQTAKTRQNKDVSSAVVEAEQENILVFNANSDDIVGIEQNKTA 480 Query: 453 VTDRVQARP-----------------VPSALEKAPAKKEAYRWKATTPVMQQ-------- 487 V Q P +P+ + + + T P+ Sbjct: 481 VVLAAQDMPFFPVEEERQIANHQHIALPAERVEQADTYQPEPHQVTQPISDSSSEESSLD 540 Query: 488 --KEVVATP-------------KALKKALEHEKTPELAAKLAAEAIER----DPWAAQVS 528 + +TP + A + E P+ KLA + +E + W Sbjct: 541 ALADDESTPLIDLSIDTNEHKVQVTSAANDLEVMPQDILKLAEQELEGEWTLEKWEYWFR 600 Query: 529 QLSLPKLVEQVALNAWKEES-DNAVCLHLRSSQRHLNNRGAQQKLAEAL-SMLKGSTVEL 586 L V+++A + D ++ G +L AL S +K Sbjct: 601 TSQLSPAVQELAQYGLMSGNIDGICTFNIPQQY-----EGMLSQLQHALESEVKSRWPNT 655 Query: 587 TIVEDDNPAVR-TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 TP + E+ +A + + + ++ L FD +L Sbjct: 656 QFTVKYGKVNEITPYIKQIERKEKAFQRAIDLLQQNPVVKDLLNTFDGQL 705 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 272/664 (40%), Positives = 366/664 (55%), Gaps = 30/664 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFDQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGACGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I QL HIL +E + A++LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 GEIGTQLNHILTQEQFPFDAEAIKLLAKAANGSMRDALSLTDQAIAFGGGNVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVVALLKALTDADIGVLMHTCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 AAQQSLYS--AQIRAFAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMPLP--EPEVPRQSFAP------VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 P P+ +P+ + P A A P PQ P P +T Sbjct: 386 PEKPVKRWQPDAVAEIRLPEWQTPVAATAAAQAPHVNEPQFAETHTAEPHTAEPHSTEPH 445 Query: 413 LAARQQLQR---VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA---L 466 +A ++ + T A + A A + ++E +V A A Sbjct: 446 IAETVPAEKKTALIEQTSANQQVETAQADAVDMAEVSIEPADTVEQVFDAELEADAALIA 505 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 E+A +A + V A + + + + P + IE + Sbjct: 506 EQAVILSQAQSQGFNADSLNADTVNAEVEPQTQTVSTAQAPSIHISEPVADIEASVASLD 565 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 +P+L+ A ++ + L S NN A+ L + +T+E Sbjct: 566 AQNSEVPELIGATAESSIVNPAMAE---TLVGSTSADNNSAAENTLDN--NPTTNNTLEQ 620 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT---------LRRFFDAELDE 637 +++ +P A+ + A D ++ FD+ Sbjct: 621 NGLDEHSPYGTEAEHSYPAMGDYAQESAPLDSYQDAYVELSSGSYNDDDFHHSFDSHAVP 680 Query: 638 ESIR 641 + ++ Sbjct: 681 DDVQ 684 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 107/288 (37%), Gaps = 8/288 (2%) Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 +A H +P PV P P P+ A + A Sbjct: 839 IALHQSVPSAASASGSVPADPVKPATYDRP-PWEAAPEVASTAELIETTQVDSGNTDIAD 897 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + S A + N A D A + +A + + Sbjct: 898 AGMAQGSDINDDSASSGQGFLEASNIANDGQNNAADGNDSQSAEQGSDSKLQALQTQARH 957 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP----WAAQVSQLSL 532 + K + A + E+T E L+ I P W ++ L + Sbjct: 958 QDKVQATALTPASKTALTQTASAV---ERTQEREVALSTLPISGHPLDLHWYKLMASLEV 1014 Query: 533 PKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 V Q+A+N+ + + + L L+ +Q+HL A +L +ALS G+ + +V Sbjct: 1015 GGRVRQLAVNSVCQTQSDPLPLLLKPNQKHLAADVAIVQLEQALSAALGNPRRVQVVIGI 1074 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + TPLE R+ ++E L QA +S+I D+N+Q L + AELD +S+ Sbjct: 1075 DAQRETPLELRKRFHQELLQQAHQSLIHDDNVQWLIQRMGAELDADSL 1122 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 241/512 (47%), Positives = 318/512 (62%), Gaps = 10/512 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+ A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ + PCG C C EIEQG FVDL+EIDAASRTKVEDTR+LLDNVQY P+RGR+ Sbjct: 61 SLNCELGMGSKPCGKCSTCVEIEQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL+H+ +E + + P AL +ARAA+GS+RDALSL+DQAIA G+G VS V+ M Sbjct: 181 AQIAQQLQHVFAQEQLQNAPEALAQIARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D Q L L+ A++ E V L++ + + +++ +L E++ LLH++A+ Q P Sbjct: 241 LGLMDKTQVLKLLNAVLNKQNESVFELVDFMSEQAVDYSQVLNELMSLLHQVALTQFVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + +LA+ P IQL YQ L G++++P+A D R G+EMTLLR LAF Sbjct: 301 ACKLETISARA-IYQLAKNALPEHIQLLYQIALQGKRDMPFAADARTGLEMTLLRMLAFS 359 Query: 361 P---RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P + E S AP + + P V ET +A + Sbjct: 360 PVQVNTSVEELVAMTPSSAPSSGPSSAPLPMRDKHDLVTPTDDTPVESKETVVAAMAQAE 419 Query: 418 QLQRVQGATKAKKSEPAAATRARP--VNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + + AT+ ++ AA + P +++ + AR LE +K E Sbjct: 420 EAPQAPIATEIDNTQRVAAPKDAPSTASDSTSNNDFTNDSDFTARQNTQPLEVMGSKSE- 478 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 +A Q + A A E P Sbjct: 479 ---RADNAATQNQVEGAAAVEKTLADETSAQP 507 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 117/300 (39%), Gaps = 23/300 (7%) Query: 364 PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET-TSQVLAARQQLQRV 422 P+ Q A + + P+P S Q +P P T ++Q A V Sbjct: 616 PMAGAIPRNQPVTKPASAESPSSPESLPEPSSPEQYSPEQATPYTYSAQADAPYPNDADV 675 Query: 423 QGATKAKKSEPAAATRARPVNNAAL---------------ERLASVTDRVQARPVPSALE 467 A +A+ E N +L E + AL+ Sbjct: 676 PNANQAELGEAPPWATDDANNQTSLNEFNDINDINEVTVNEVTGGDVSVNELSHEALALD 735 Query: 468 KAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAA-----KLAAEAIERDP 522 + +A A + V L + LE E E+ A + A + D Sbjct: 736 EVTVPVDAQEDIAENQQEIENTVFDPTAHLAQDLECEVDYEVPAFLESGEKVTIAPQLDK 795 Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 W+A ++Q+ + L +Q+AL++ + + V L+L ++ HLN A+++L ALS + Sbjct: 796 WSALITQMQVAALTKQLALHSEFTQDGDKVVLNLVQTKEHLNTDSAKEQLQRALSDVLQQ 855 Query: 583 TVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + L + D A+ TP +Q+I + A++ + + +I + F+A++ +SI+ Sbjct: 856 QITLEVHVGD--AINTPFALQQSINRVRFEYAKQVVETNESICMFKDMFNAQVLNDSIKA 913 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 250/617 (40%), Positives = 351/617 (56%), Gaps = 12/617 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV++A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G A PCG C+ C+EIEQG +VDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL +E +A E AL LLARAA+GS+RDALSLTDQAIA G QV V+ M Sbjct: 181 EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ A+V + V+ L+N+ A + +++ + E+ LLH+IA+ Q P Sbjct: 241 LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + + +LA+TI +QL YQ L GRK+LP+A D + EMTL+R +AF Sbjct: 301 ACKLETTSAKA-IFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ E ++ V + + Q+ P PL ET++ + Sbjct: 360 PNAPIAETVDEIENGRSEHNLPVNHASPSGGPGNVSKQEEP--PLSETSATIDQGEAP-- 415 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 ++ + + + P ++ + + ++ + V P+ A + + Sbjct: 416 -IEAQPEHEPTSPKTPPQSPIADASTDLPSSAPAETVANEEEPT----AVSNTQTNTAAE 470 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 T + A+ ++ + + A A+ + P A + + P L ++ Sbjct: 471 TDIAFEANLSSASASEAQEPQSNASVEDEEASPVAQYFDEPPLDAYMDDM--PPLQDESG 528 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 + S++ L + L + L K + N ++ Sbjct: 529 HYELDTPESERIVEPSPSAEEQLTSTADMLALRQKLKQKKAQDADAKSNSAANAKTQSAS 588 Query: 601 EWRQAIYEEKLAQARES 617 E + K A Sbjct: 589 EIQARFTRSKTDSASTV 605 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 108/312 (34%), Gaps = 35/312 (11%) Query: 364 PLPEPEVPRQSFAPVAPTAVMTPT--QVPPQPQSA-----PQQAPTVPLPETTSQVLAAR 416 P+ PE+ +P + +PT P QS Q A T+ T + + Sbjct: 620 PINSPELSNSPELSNSPEPINSPTLEAAPESEQSQDSITDHQSANTLNDGSDTQLLGGSE 679 Query: 417 QQLQRVQGATKAKKSEPAAATR--ARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 Q A A A + + E A+ P + Sbjct: 680 QASTNADFADNNDSGHDAFALDDFEEDMPFSNDESDANYNPNPHVEDAPPWDTGKSVQDG 739 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHE-------KTPELAAKLAAE----------- 516 + TPV + E+ + + E+ + L+ Sbjct: 740 HSVEPSLTPVPRANELESKEHGFYERGENAGERSFTRDALDFDTPLSTTYEGSLQAYLSD 799 Query: 517 ------AIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQ 570 A + D W+ V Q+ + L++Q+ L+A + N V L + SQ HL A++ Sbjct: 800 GSKLTHASQIDDWSNLVEQMPVAGLLKQLVLHAAFSRNGNHVSLEIHHSQTHLLKDSAKK 859 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 +L +A+ G VE++I + TP +Q I+ + A A I D IQ L Sbjct: 860 QLVDAIHHGLGENVEVSITLGE--PSSTPFALQQEIHAMRHAHAHSVIKTDETIQALLST 917 Query: 631 FDAELDEESIRP 642 FD + ++++ Sbjct: 918 FDGSVLTDTVKA 929 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 243/529 (45%), Positives = 321/529 (60%), Gaps = 9/529 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+TA++N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPNKFSELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+TG++A PCG C CR+IEQGRFVDL+EIDAASRTKV+DTR+LLDNVQY P +G + Sbjct: 61 SLNCDTGLSANPCGECGTCRDIEQGRFVDLLEIDAASRTKVDDTRELLDNVQYRPTQGDY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI+ QL H+L +EHI HEP AL LARAA GS+RDALSLTDQAIA G+ Q+ST VS M Sbjct: 181 EQIQQQLSHVLTQEHINHEPAALAQLARAANGSMRDALSLTDQAIAQGNNQISTVVVSDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ +M+E + V + A + +L E++ LLH+IAM Q+ P Sbjct: 241 LGLMDKNQILKILHSMIEGDKIAVFEQVESLAQTSPNYAHVLDELMSLLHQIAMTQVVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + + +LA +I +QL YQ L G+++LP++ D R G EM LLR LAF Sbjct: 301 VCKLETISARA-IYKLAGSISKEHVQLLYQMALNGKQDLPHSMDGRSGFEMVLLRMLAFT 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ ++ V +P+ + + P + + + Sbjct: 360 PVTPIDGFVDIIKTDMQNHIAEVGEMVTFAAEPEVVSPEPTILEAPVIEQEPKSTTNPMI 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A K ++P + ++ + PV +E E + A Sbjct: 420 ESESAVDPK-AQPETIVPYQSEVREEIDPEPTTAPEPVKEPVSVIVEDEENSAEKVDFSA 478 Query: 481 TTPVM-------QQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 M + E + + + + A++ EA E P Sbjct: 479 VMNDMFSEPEPEPEPEQPQVSVSTLQGPDESAMFQEQAEIMHEAHEMHP 527 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 103/289 (35%), Gaps = 31/289 (10%) Query: 383 VMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPV 442 P V + +S PQ L+ + E A+ + Sbjct: 546 SDVPIDVQVEQESQPQINTVASNAIDDLLALSDDLNTDSPSNESNESLVEKASINKLDSE 605 Query: 443 NNAALERLASVTDRVQARPVPSALE-KAPAKKEAYRWKATTPVMQQKEVVATPKALKKAL 501 E ++ +P ++ A A + TTP+M + P+ ++L Sbjct: 606 TPIVAEHKGESKPEMELKPELFEMQLDAVADSQTVPELNTTPIMSAPTIQTEPEVQAESL 665 Query: 502 EH-EKTP---------ELAAKLAAE------------------AIERDPWAAQVSQLSLP 533 E+ P EL + A + D W + QL+L Sbjct: 666 SQPERDPSKMGLVDNSELVKVTVQKVDVQGLQAILPNGDKLTSAAQIDEWTNVIGQLNLT 725 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 L +Q+A++A + V L L + HL+N + LAEALS+ +++ L + + Sbjct: 726 GLNKQLAIHASFSREGDVVTLLLGQDKAHLHNETSVNALAEALSVFFDTSITLQVSFGE- 784 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + TP + I + + A+ + ++ +Q L+ F + +++P Sbjct: 785 -PINTPYALQMHINQIRNEYAQSILNSNPELQKLQSTFGTSVVSGTLKP 832 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 241/502 (48%), Positives = 312/502 (62%), Gaps = 15/502 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QLE IL +E + E +AL LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEISQQLEFILGQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ Q + L++++ +A+ +M + + G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDERQVIGLLKSLCDADIAHLMQTTAQVLSFGADADEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + ++ A+ + P +QLYYQ LL GRKEL +APD + G+EM LLRA+AF Sbjct: 301 AAQHSLYS--EQILAFAKQLKPEQVQLYYQILLTGRKELAFAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPT-------------VPLPE 407 P + V + + + P+P T P+ + Sbjct: 359 PEKTVNRWVVDDTATLELPNGTSKAAAKTKPEPDVKLSAETTEVTEATETLAVLGTPVAQ 418 Query: 408 TTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE 467 T + +A+ + + + + A +A L A+ + Sbjct: 419 TITAEVASLEVKDTPSDTEQVIEDDEGAPLKALTAEQDVLLSQAASMGFEPQNSNDDSPS 478 Query: 468 KAPAKKEAYRWKATTPVMQQKE 489 + +A E Sbjct: 479 SDVVVNDTSSAQANDDASVTDE 500 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 7/269 (2%) Query: 379 APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA----RQQLQRVQGATKAKKSEPA 434 AP A V PQ ++ Q L + +L + V + + + +P Sbjct: 622 APQASTQVESVRPQAETEAQNHAPQALVTQEAPLLDKVSTDADRPPWVAASDGSSQFDPL 681 Query: 435 AATRARPVNNAALERLAS--VTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVA 492 + P+++A R++S + D+ + +E PA + + M + A Sbjct: 682 KLAQDTPLSHAQDNRVSSVGMEDKTTLDSILPVIEALPAIEAEAQGTGYAEKMLDTAMPA 741 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLVEQVALNAWKEESDNA 551 + + +L ++ E D W ++++ + + Q+A+N+ + + Sbjct: 742 KLMSDVADDDSGIDAQLISEHQISGHEMDLHWYKMMAEVKIGGRIRQLAVNSVCQGLASP 801 Query: 552 VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKL 611 L L+ Q+HL A ++L ALS V + + + TPLE R+ ++E L Sbjct: 802 FPLLLKPDQKHLGADVAVKQLEAALSEYLQQDVSIAVNVGYDEHRETPLELRKRFHQELL 861 Query: 612 AQARESIIADNNIQTLRRFFDAELDEESI 640 QA++ +I N +Q L DA+L E+S+ Sbjct: 862 QQAKQRLIGSNKVQWLLSQLDAQLQEDSL 890 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 200/646 (30%), Positives = 321/646 (49%), Gaps = 35/646 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ F++V+GQ+HV L N + RI H Y+FSG RG+GKT+IAR+LA Sbjct: 1 MSYQVLARKYRPQKFSEVIGQDHVTRTLKNAIEQQRIAHGYIFSGHRGIGKTTIARILAM 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC++ + PCGVCD+C+E++ G+ VD+IEIDAA+ +++ R+L + +Y PAR Sbjct: 61 ALNCQSADHPVSEPCGVCDSCKEVKAGQSVDVIEIDAATNRGIDEIRELREAARYRPARD 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y++DE H ++ +FNALLKTLEEPP H+ F++ATT+P+ +P TI SRC F A+ Sbjct: 121 RFKIYILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTEPEDIPQTIRSRCQHFSFHAV 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + I QL I +E I E AL +LA A +GS+RDALS+ DQAIA+ Q+ T V Sbjct: 181 KFDDIVLQLRDIAGKEGIGAEDDALAMLAEAGDGSMRDALSIMDQAIAACGNQLKTDDVR 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++GT+ D ++ + + E V+ I++ G + + L + +++ Sbjct: 241 GLMGTVSSDVLEDIMNGVHANSSESVLTTIDKLLIEGHSPLHFAKQAVRFLRNAMVAKVA 300 Query: 299 P--AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 +AL + R+ +A D+ + Q +L +L Y ++R +E+ LL+ Sbjct: 301 GKDSALLQISSDERERVARVAEQFSEEDLARFLQIMLRTHSDLGYKQEQRFHLELGLLKL 360 Query: 357 LAFHPRMPLPE--PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 + +PL E + + +V P P P AP A + P P +S+ A Sbjct: 361 VHAQRMLPLEELLSGSASAAPSSAPRASVAAPVSRPSSP--APSAATSRPSPFESSRTAA 418 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 A + +A+K+EP A A + + T A P+ + APA Sbjct: 419 APRP--SPFEVDRARKNEPKAEADAE---------ITAKTPEFTAPAAPTPMSAAPA--- 464 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 + P +V + A+ P AA A E A +++L Sbjct: 465 ----RGYEPQSAPAPMVTSSVGSAVAVAEVAPPPPAAAPAGETNIPAIRDAVLNELETAG 520 Query: 535 ---LVEQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKL-AEALSMLKGSTVELTIV 589 LV + W ++ V + L + L+ +KL A++ G ++ ++V Sbjct: 521 QNVLVHTLETGVWAANANEITVKVALSPAMIDLSMGPEVKKLVTAAVNKATGRPLKFSMV 580 Query: 590 EDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 +PA R A+ ++A + + ++ F AE+ Sbjct: 581 GGADPATLAKPAPRTAVGPSARSRAMQH----PLVNYMQEKFGAEV 622 >UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=A9D7T4_9GAMM Length = 882 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 253/532 (47%), Positives = 332/532 (62%), Gaps = 19/532 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITA+PCG C +C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGRF Sbjct: 61 GLNCEQGITASPCGQCSSCVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L +E + + AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 181 DEISAQLSYVLTQEQLTFDHAALTLLAKAANGSMRDALSLTDQAIAFGAGTVQLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ LSL A+V+ + E +M +I + + G + E +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEKHVLSLFNALVQGDIENLMRMIGQILSFGADPEEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA++F Sbjct: 301 AA--QLSIYSEQIKAFAEQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ V + A V +T P QP++ + V + Q +++ Sbjct: 359 PETPVTRWVVDK--PAKVIIPERVTGQDNPQQPEAKDKP---VSQDNSNGQPTEVQKEPV 413 Query: 421 RVQGATKAKKSEPAAATRARPVNNAAL------ERLASVTDRVQARPVPSALEKAPAKKE 474 K E A +A P + E+ ++ PS+L A + Sbjct: 414 SEPVPELVSKPEAAVIPQAEPDDETDDLLALNSEQALILSQASSQGVEPSSLNTAEPDSQ 473 Query: 475 AYRWKATTPVMQQKEVV----ATPKALKKALEHEKTPELAAKLAAEAIERDP 522 A ++ P ++ + PEL+ + A+ + D Sbjct: 474 AETTHLDDKAVRLSPPEDPSKVNPPGSNQSELSQ--PELSPEQLAQDADFDA 523 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 11/278 (3%) Query: 365 LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG 424 L + A + +V + + P++ P + L + ++ Sbjct: 586 LAARDSLLTDLAKTPEESAGKKPEVQRKDFAPPKRQPQAENDDAAPSSLGGQAIVEVKSD 645 Query: 425 ATKAKKSEP--AAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 A A +S+P A A RP ++E A+ + + +A Sbjct: 646 AKAALQSQPVLATAIEDRPPWEESVEVAAT---ENTTSSGGDEQGTDTHPMVSSQVEAQV 702 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN 542 PV Q + ++ + P L W +S + + V Q+A+N Sbjct: 703 PVQDQVQTEIQAQSF------DPLPPLGEGEVTGNEVDLNWYRLMSAIDVGGRVRQLAVN 756 Query: 543 AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW 602 + E + L L+ Q+HL A +L EAL + G+ ++++I + TPLE Sbjct: 757 SVCHEFTEPLSLLLKPIQKHLAAEIAIVQLEEALGKVLGAEIKVSISVGVDGDRETPLEV 816 Query: 603 RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 RQ + E AQAR+ ++ D N+Q L AEL+ +S+ Sbjct: 817 RQRFHREIQAQARQGLLTDTNVQWLMSQMGAELENDSL 854 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 252/526 (47%), Positives = 325/526 (61%), Gaps = 16/526 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFEQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 DEIGTQLNHILTQEQLPFEVEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVIALLKALTDADITVLMQTSAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 CAQQSLYS--AQIRAFAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ +V +P V P +A + + Q Sbjct: 386 PEKPVKRWQVE-------SPAEVSLPVGQTSTSLAALATSAAEKKTDLVEQ-----PTDV 433 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE-KAPAKKEAYRWK 479 V A + A + + + S ++ P+++E A ++ K Sbjct: 434 NVHAAVEINAPSDTADSALFAEQTLIISQALSQGYKLSESIAPTSIEIPVAAISQSEDTK 493 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTP-ELAAKLAAEAIERDPWA 524 T V ++ V L++ + +A I +D +A Sbjct: 494 VETLVSTNEQAVVNNTDSDTQLDYVYGHGDYTQDVAPLDIYQDDYA 539 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 111/306 (36%), Gaps = 22/306 (7%) Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQ-VPPQPQSAPQQAPTVPLPETTSQVLAA 415 L F + P P +S +P AV +Q V P P+ + Sbjct: 641 LDFKRKEPTIGPLSATRSDITTSPKAVKAVSQSVESIDSEFDFDDDFEPAPQMDGGFAQS 700 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 Q + A++ + + + DR P+ + P Sbjct: 701 VTQANKNPEASQPLTQNGQITQNGQKPSGEKPVSVDDPNDRPPWEAAPATNMQHPVVHPV 760 Query: 476 YRWKATTPVMQQKEVVA--TPKALKKALEHEKTPELAAKLAAEAIE-------------- 519 + P Q E+ +L + + + E + Sbjct: 761 SALEPVVPTAMQDELAPIDQAPHTPVSLMSDPIEDAVKESLTEPVTGLSNQTGLSVVQSV 820 Query: 520 -----RDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAE 574 W ++ L + V Q+A+N+ + + + L L+ Q+HL A +L + Sbjct: 821 SGNPLDLHWYKLMASLDIGGRVRQLAVNSVCQAQSDPLPLLLKPDQKHLAADVAIVQLEQ 880 Query: 575 ALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAE 634 AL+ G+ + +V +P TPLE R+ ++E L QA++S+I D+N+Q L + AE Sbjct: 881 ALTAALGNPRRVQVVIGSDPKRETPLELRKRFHQELLQQAQQSLIKDDNVQWLIQRLGAE 940 Query: 635 LDEESI 640 LD +++ Sbjct: 941 LDTDTL 946 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 252/532 (47%), Positives = 323/532 (60%), Gaps = 19/532 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSLYS--AQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPE----------------PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 P P+ S PV AV P +A + + T+P Sbjct: 359 PEKPVKRWQVEDAAKVSLPAQQPTSTTPASNMPVVEQAVNQAVAEKKTPLTAERDSQTLP 418 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS 464 + + + Q + A NAAL V Sbjct: 419 QAAISEPMAKSENTTASQQALSAEDMLAVDDAIDDEAELNAALIAEQQVILSQAHSQGFG 478 Query: 465 ALEKAPAKKEAYRW-KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 A + ++ EA +A + V+ P + A ++ A + Sbjct: 479 ANAETVSRTEALSTPEAKVDSSAESNSVSMPASNIDAEHNQAATVDTASVDQ 530 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 7/284 (2%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E E+ +S + V PT + P PP ++ P + + + Sbjct: 739 PFDDDFEAELHLESQSNVTPTPPLDPNDRPPWEEAPVAAMDETHAPAASVNLQT--ESPV 796 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Q A + + P AA P + A + ++ P+ P + + K Sbjct: 797 AAQTAVEHLGAAPVAAQ-ISPTDREATRVVQALEQAAGQESEPATQSPEPNTPQQPQAKE 855 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP----WAAQVSQLSLPKLV 536 T Q + ++ E + A A++I P W ++ L + V Sbjct: 856 LTQPKTQPQTQQPASVQSQSSETVQPTSSTALALAQSITGHPLDLHWYKLMASLEIGGRV 915 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 Q+A+N+ + N + L L+ Q+HL A ++L +AL+ G+ ++ +V +PA Sbjct: 916 RQLAVNSICQVQANPLPLLLKPDQKHLAAPVAIEQLEQALTAALGNPRQVEVVIGTDPAR 975 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 TPLE R+ ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 976 ETPLEMRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1019 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 180/527 (34%), Positives = 265/527 (50%), Gaps = 32/527 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R +RPQTF DVVGQEHV T L N L R+ HAYLF+G RG GKTS A+++AK Sbjct: 1 MAYTALYRVYRPQTFQDVVGQEHVTTTLRNALRENRLSHAYLFNGPRGTGKTSAAKIMAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC CD CR I G D++EIDAAS VE+ RD+ D V++AP+ R+ Sbjct: 61 AVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEIDAASNRGVEEIRDIRDKVKFAPSDVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPSHVIFILATTEPHKLPATIISRCQRFDFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+ I + + E +ALQL+A+ AEG RDALSL DQAI+ +V + + Sbjct: 181 RVMVDLLQRICQSQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSKDEVRASDIMQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 GT+ L + E + +VM ++ +G + E L + L + +++ +P Sbjct: 241 TGTVAQSYFSVLARHIAENDIAQVMEQFDKVMVQGKDPEQFLHDFLYYYRDMLLLKTAPQ 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + I+ + E+A+ + +T +L ++ R+ VE+TL++ Sbjct: 301 LEEIVERTMIDDQFAEVAKLYSFPVLYAAIETCNQALSQLKWSTYARVLVELTLVKMCQ- 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 T M + V + +A V L E QV+ + Sbjct: 360 ----------------PNANATESMGASPVNSEELTAMSNRIRV-LEERLVQVMQGQVST 402 Query: 420 QRVQGATKAKKSEP-----AAATRARPVN-----NAALERLASVTDRVQARPVPSALEKA 469 Q A + +KSEP A+ P+N A++ + R Q + + L+K Sbjct: 403 PGQQKAEETRKSEPRRIAAASGGSRTPMNRVREVAKAMDENLTRQVRGQWSQILTELKKI 462 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE 516 + +A+ PV E V A+ +KT E + E Sbjct: 463 KIQYQAWLVNG-QPVAAGNEAVVV--TFNSAIHCDKTMEAELRSVIE 506 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 207/360 (57%), Positives = 265/360 (73%), Gaps = 1/360 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE IA EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD + L++A+ A+G +++A+ +E A R + + A L ++ LLHRIA Q +PA Sbjct: 241 LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEA-ADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFE 359 Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 81/234 (34%), Gaps = 29/234 (12%) Query: 435 AATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK--EAYRWKATTP---VMQQKE 489 + T+ P ++ + P +A +A ++ W+ P V + Sbjct: 582 SPTKPAPRAQVSVPTPRARAATGDVPPNGAARAEARSESRGAPPPWEDIPPDDYVPLSMD 641 Query: 490 VVATPKALKKALEHEKTPELA------------------AKLAAEAIERD-PWAAQVSQL 530 P + P+ + +AI D W + L Sbjct: 642 DGFIPPDDGFVPVFDSGPDDVRVAPKPAPAPPVDTRPLPEPIPLDAIGYDGEWPTLAASL 701 Query: 531 SLPKLVEQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIV 589 L + Q+A N+ +D + L + Q + KL AL+ G V++ + Sbjct: 702 PLKGVAYQLAFNSELTAADGGTLKLAVPVPQY--ADAAQVAKLKAALADALGKPVDVAVE 759 Query: 590 EDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 PA RT A ++ +A + + AD ++ L R F A + E SIRP+ Sbjct: 760 VG--PARRTAAALAAAERAKRQREAEQEMSADPFVRQLLREFGASIVEGSIRPV 811 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 228/515 (44%), Positives = 304/515 (59%), Gaps = 30/515 (5%) Query: 1 MS--YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLL 58 MS YQVLARK+RP+ F ++VGQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L Sbjct: 1 MSQQYQVLARKYRPKNFHELVGQSHVSKALINAIDHNRLHHAYLFTGTRGVGKTTIARIL 60 Query: 59 AKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 +K LNCETG+T+TPCGVC +C I+QGRF+DLIEIDAASRTKVEDTR+L+DNV YAP +G Sbjct: 61 SKCLNCETGVTSTPCGVCSSCVAIDQGRFIDLIEIDAASRTKVEDTRELIDNVPYAPTQG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 121 RYKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPL 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + + + ++L +E+I AL LA AA+GS+RDALSLTDQAIA G G+++ + V+ Sbjct: 181 PQQALSDHIANLLTQENIDFTQPALWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVN 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 MLG +D +SL+ + + N + A I + A+ ++ ++ + LLH+IAMVQL Sbjct: 241 DMLGLIDSADLISLLLDIYQGNAPALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLL 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P N ++ LA I P +QLYYQ ++ GR+++ A +EM LLR LA Sbjct: 301 PNVSLNVNDLQAQQITALAAQIGPDVLQLYYQIVIQGREQIKLANTPLQALEMCLLRLLA 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQ--VPPQPQSAPQQAPTVPLPETTSQVLAAR 416 F P + VA + TP QP S QAP A + Sbjct: 361 FRPL-----------ALNEVAVASSNTPAHKASSDQPASIEMQAPNP---------HADQ 400 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + A A +E A T P + + + T + + + + Sbjct: 401 AEDYLTEQALSATSTESMADTNIEPQSPNVNDADINNTANIDVKTHQDDY-----QLSST 455 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAA 511 P + ATP + + P+L Sbjct: 456 SGADINPASLNETDFATP-LASEPTAQDTRPQLEE 489 >UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter sp. MED105 RepID=A6GQQ4_9BURK Length = 586 Score = 514 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 229/641 (35%), Positives = 325/641 (50%), Gaps = 74/641 (11%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LARKWRP+ F +VGQ HV+ AL++ L R+HHAYLF+GTRGVGKT+IAR+LA+ +N Sbjct: 7 QALARKWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARILARAVN 66 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE GI+ TPCG C C EI QGRFVDL+E+DAA+ T+V++ R LL+N YAP GR+KVY Sbjct: 67 CEQGISRTPCGKCQACVEISQGRFVDLLEVDAATNTRVDEMRALLENAMYAPTAGRYKVY 126 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS +FNA+LKTLEEPP HV F+LATTDPQK+P T+LSRCLQF L+ L +Q+ Sbjct: 127 VIDEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQLPPDQL 186 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L HIL+EE IA EP AL+LLA+AA GS+RDALSLTDQAIA G V+ V MLG Sbjct: 187 ADHLAHILSEEQIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVTEDTVRTMLGA 246 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 +D L++A+ + +G+ ++ L N AA + A+L E+ + +R+++ + Sbjct: 247 IDQQVVHQLLQALAQGDGKALLELSNALAAASAPFGAILDELAAIAYRLSVAHFAGGLDA 306 Query: 304 NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 363 +D + ++ L D+QL YQ R EL AP+ +G M L+R LAF P Sbjct: 307 DD--PDQAALQNLQGAFGAEDLQLIYQIATHARAELHLAPEEHIGFSMALVRMLAFKPG- 363 Query: 364 PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQ 423 + AP+AP V P + P A + + Sbjct: 364 ----GQGAVTRSAPLAPAVVKATV---PVMAAKPAVAQSP-----LPKAAPQAAAPAVAD 411 Query: 424 GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTP 483 ++ D PV + APA K P Sbjct: 412 DFDESPPW-----------------------DTADDLPVAQSQPAAPAIKP-------QP 441 Query: 484 VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA 543 V Q P A P+++ ++ A+ L Q + A Sbjct: 442 VYNQSASGDLPSAT-------NWPQVSQEVPAK-----------------GLTRQALVQA 477 Query: 544 WK---EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 + + + LR++ + +L AL GSTV L + + A +T Sbjct: 478 ELVEASREGDVLQIVLRTAIKAYTEASMVTRLEGALGQYYGSTVRLQMQFGE--AQQTAH 535 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 + + L A++++ D ++ ++ A + S R Sbjct: 536 AVQSETRRQALEGAKQALQEDPFLKDIQNLMGATVVSGSER 576 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 177/508 (34%), Positives = 266/508 (52%), Gaps = 9/508 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQTF+D+ GQEHV L N + GRI HA+LF+G RGVGKTS AR+LAK Sbjct: 1 MSYLVLARKWRPQTFSDLTGQEHVSQTLQNAIDSGRIAHAFLFTGARGVGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G++ PC VC C EI G VD++EID AS T V+D R+L +NV+Y P+R R+ Sbjct: 61 ALTCEQGMSPEPCNVCPACTEITAGTAVDVLEIDGASNTGVDDIRELRENVKYLPSRLRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPP HVKF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ +L HI+++E IA +L ++AR +GS+RD+LS+ DQ +A QV + V ++ Sbjct: 181 GKVVGRLRHIVDQEGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVVSL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L A+ + V+ ++ G E++ L + +++ Sbjct: 241 LGVVDRRLLLDATAAVFGRDTRTVLDIVARVDEFGYNMRQFCGELIDHLRNLLILKAVGD 300 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + A +R+ A ++P D+Q + LL EL + R+ +EM L++ Sbjct: 301 GTDLLDLSEAELATLRQQAESVPLDDLQRHLTVLLRADGELGHTSFPRLVLEMALVKMAT 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTP----TQVPPQPQSAPQQAPTVPLPETTSQVLA 414 P +P+ + + V PP P +P A PE T+ Sbjct: 361 LAPAVPVDQLLERLNKIEEGSGGGVADARAQWRATPPAPAGSPTPA---RAPERTAATPP 417 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 R ++ + A + E A + ++ + R + +P Sbjct: 418 PRPAERQAAPSAPAPRREEAKPVSEPRRTGDSWADFVALVKGAKPRLGSMLEQGSPLVVS 477 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALE 502 A R + P + AL+ Sbjct: 478 ADRLEIGFPEGAFALASLRDSDSQAALK 505 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 200/707 (28%), Positives = 297/707 (42%), Gaps = 76/707 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q H+ L N ++ R+ HA SG RG GKT++AR+LAK Sbjct: 1 MSYLVLARKYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC G T PCGVC +C+EI VD+ EID AS VE R+L +NVQYAPA G + Sbjct: 61 AMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPALGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNALLKTLEEPP HV F+LATT+ K+PVTILSRC ++ K + + Sbjct: 121 KVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L + E+ E ++L +AR + G +RDALSL DQ +A G+ S + V + Sbjct: 181 DDIVGHLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +L +A+++ + + +++ ARG + + ++ ++L L + +V+ Sbjct: 241 LGVAGRKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRD 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P L + M+E P + L + +P R+ +E+ L+R Sbjct: 301 PGPLLDIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQPRLALEVALIRICE 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAV------MTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 P + + + A + P P+S AP P T S Sbjct: 361 ITPAVAIDSLVAALEVLASQPASKDQIINIGPASGPAPALPESGGGSAPPAPEETTASAA 420 Query: 413 LAARQQLQRVQGATKAKKSEPAAAT-----------RARPVNNAALERLASVTDRVQARP 461 AA Q + A ++EP + V ++ QA P Sbjct: 421 EAAPQHEESTPVAASDPQTEPEPQEALAPEPEPEPEPEKEVTPEPEPEPEPPEEKPQAAP 480 Query: 462 VPSALEK-----------------------------APAKKEAYRWKATTPVMQQKEVVA 492 P A + P Y + P++ E Sbjct: 481 EPQAPVESAPPEPEEESIPEQAADSDAYQADDESPYYPEPDPTYAAADSEPIIPDMEPDY 540 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIER---------------DPW---AAQVSQLSLPK 534 P + + AA A DPW + V + S+ Sbjct: 541 GPPQYETREVQPYVVQEAATPEEPAAPAPEPEEDEPEPPPFEGDPWKAFSKDVQEKSI-- 598 Query: 535 LVEQVALNA-WKEESDNAVCLHLRS---SQRHLNNRGAQQKLAEALSMLKGSTVELTIVE 590 ++ KE L S+ LN Q L L G V+ I E Sbjct: 599 MLGLTLEKCRLKEYEKGRFVLETDGAPFSRDQLNTPENQTILTGVCKSLFGRKVQFVIEE 658 Query: 591 DDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 P+ + E +A ++ R F ++ E Sbjct: 659 PSEENRTAPVMNQAEKRRELEQEALNH----PLVEEAVRIFGGKVVE 701 >UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 Tax=Burkholderia glumae BGR1 RepID=C5AFH6_BURGB Length = 861 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 227/517 (43%), Positives = 300/517 (58%), Gaps = 2/517 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE +A EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVMHLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ ++G ++A+ +E A R + + L ++ GLLHRIA Q +PA Sbjct: 241 LGALDQTYMVRLLDAIASSDGPEILAIADEMALRSLSFSTALQDLAGLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEA-ADLRRFAEALSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P P P+ S A Q Sbjct: 360 PAASGGAPVPGAAPAVAAGGRRAAAPVAPAGAGARDAAAHAMPPVAAAASARPAPAPVAQ 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A + P A A + A +R A + R + P+ ++A A Sbjct: 420 AAAEPPPAAVAAPRAVPPAAARDVATAKRPAELPVRA-EQARPAESDEAAAVAPRESAPD 478 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA 517 + + + ++ AL TP E Sbjct: 479 LADEPAESPLASQLESSDVALGAGPTPPAEPAAMLEP 515 Score = 94.2 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 73/221 (33%), Gaps = 12/221 (5%) Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 + A +R + + P+ + P + Y PV Sbjct: 632 NVPTPRPRTAQPSRPAAAADPSAPPPWDDMPPDDYLPISADDHYGPPPDDGY-----LPV 686 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE-RDPWAAQVSQLSLPKLVEQVALNA 543 + P L +A +AI W + L+L + Q+A N+ Sbjct: 687 FDSSPDDVRVAPQPAPAPADTRP-LPPAIALDAIGYAGEWPQLAATLTLKGVAYQLAFNS 745 Query: 544 -WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW 602 + L + Q + KL AL+ G VE+ + PA RT Sbjct: 746 ELISAQGGVLKLAVPVPQY--ADAAQVVKLKTALAEALGKPVEVAVEVG--PARRTAAAL 801 Query: 603 RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 ++ +A + I AD +Q L R F A + E S+RP+ Sbjct: 802 DAVERAKRQREAEQEIGADPFVQQLIRDFGARIVEGSVRPV 842 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 188/641 (29%), Positives = 303/641 (47%), Gaps = 55/641 (8%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SYQV+ARKWRPQ+F DVVGQ H+ L+N L GR+ HA LF+G RG GKTS AR+LAK Sbjct: 18 SYQVIARKWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAKA 77 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 L C PC C +C EI G +D+IEID AS V+ R+L D V + P+ G++K Sbjct: 78 LRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSGKYK 137 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS +FNALLKTLEEPP HV F++ATT+ K+P TILSRC +F + + Sbjct: 138 IYIIDEVHMLSTSAFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRISTR 197 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L+ I + E + + AL ++AR +GS+RD+ SL DQ I +G ++ +V +L Sbjct: 198 SITERLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEIL 257 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D + A+++ N + V+ +I + AA G E ++L ++ + ++++S A Sbjct: 258 GLTDRALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEAQ 317 Query: 302 LGNDMAAIELRMR---ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + ++ E+A+ +P DI + + L G ++P A D R+ +E+TLLR + Sbjct: 318 ASQILEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQDPRIVLEVTLLRMAS 377 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + L + + P P P V LP + Q+ Sbjct: 378 APKLVDLK--TLLQGGAIPSHSAGGARP------------YVPPVSLPVKGHDRIEESQK 423 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + +A K+ A+ A + A A PVP+A Sbjct: 424 VLDGPTGLEAMKAALNKASSAASSLKSNPAPAAKPAATAPAAPVPAAQPTP--------- 474 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 V++ K +A+ K E+ E + +D A + VE Sbjct: 475 -----VVESKPKIASGSTSK-----ERWVNFV-----ELLRQDD--ALFA-----AKVEN 512 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGA----QQKLAEALSMLKGSTVELTIVEDDNP 594 + + +E + L + L ++ A ++KL + G+ ++ + Sbjct: 513 LL---FVKEEGKLISLGVPVKLAFLKDQMADAQVRKKLQGFIDSYWGAGYSFEVLMSRDQ 569 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 + +Q + R II + ++ + F ++ Sbjct: 570 VGESAQAIQQKKVQMAEEDLRNKIIENPMVKAAQTVFKGQI 610 >UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Bacteroidales RepID=C3QNI8_9BACE Length = 621 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 162/640 (25%), Positives = 273/640 (42%), Gaps = 28/640 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T C C++C + R ++ E+DAAS V+D R L++ V+ P G++ Sbjct: 63 INCMTPTADGEACNQCESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ ++E I EP AL ++A A+G +RDALS+ DQ ++ G ++ ++V Sbjct: 183 EDTVNHLSYVASKEGITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL-SP 299 L LD + L + +E + L N+ +G + + + + + + Sbjct: 243 LNVLDYEYYFRLTDCFLENKVSDALLLFNDILNKGFDGSHFITGLSSHFRDLLVGKDPVT 302 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L A+I R +E A+ P + + + ++R+ VE+TL++ Sbjct: 303 LPLLEVGASIRQRYQEQAQKCPLPFLYRAMKLCNECDLNYRISKNKRLLVELTLIQVAQL 362 Query: 360 HPRM-PLPEPEVPRQSFAPV--APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + P+++ PV P A P + QQAP P + + A Sbjct: 363 TTEGDDVSGGRGPKKTIKPVFTQPAAAQQPQVAS---ATQVQQAPVHSSPSSVTTQAANG 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q Q + + PA+ A + + + + + + K Sbjct: 420 TTAQHPQASAAVQPGAPASPGAASSAPSQGAGVAQTAKEERKIPVMKMSSLGVSIKNPQR 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 + V P+ + + E+D A ++ ++ Sbjct: 480 DQVSQNATTTYVPKVQQPEEDFMFNDRDLNYYWQEYAGQLPKEQD---ALAKRMQ---ML 533 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK-GSTVELTIVEDDNPA 595 LN + + + + + +L + L S V +T+ + Sbjct: 534 RPALLN-----NSTTFEVVVDNEFAAKDFTALIPELQDYLRGRLKNSKVMMTVRVSEATE 588 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 P+ + ++++ L+ F EL Sbjct: 589 TVRPVGRVEKFQMMAQKN--QALMQ------LKDEFGLEL 620 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 226/516 (43%), Positives = 301/516 (58%), Gaps = 18/516 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F VVGQEHV+ AL NGL GR+HHA+LF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRDFTQVVGQEHVVRALTNGLDKGRLHHAFLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+ +TPCG C NC+ I+ G FVDLIE+DAASRT V+DTR+LL+NV YAP+RG + Sbjct: 61 SLNCKEGVRSTPCGKCQNCQAIDGGNFVDLIEVDAASRTGVDDTRELLENVHYAPSRGHY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHM S SFNALLKTLEEPP H+KFLLATT+P+KLPVT+LSRCLQF+L+ + Sbjct: 121 KVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L IL E I E AL L+ARAAEGS+RDALSL DQAI G GQV V M Sbjct: 181 KAIAEHLNSILEAEEIPSESYALTLIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG+++ L++A++ NG+ ++ + E A ++ ++L ++L LL R+A+ QL+P Sbjct: 241 LGSIEQGDLFILLDALLAGNGQGLIEKVREICAYSVDISSILADLLHLLQRLALYQLAPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + D LA P ++QL+YQ LIG ++L YAPD EM LLR L F Sbjct: 301 TV--DDIDERGIFSSLAARTTPEEVQLFYQIGLIGSRDLTYAPDHHTAFEMILLRMLCFR 358 Query: 361 PRM----------PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 P P PE S P+A P Q + + Sbjct: 359 PADGASSCQALTNPKPEKTGLASSDPPLAQETTSPPLSGNDHWPGLVTQLKLTAIARQLA 418 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALE----RLASVTDRVQARPVPSAL 466 + A ++ + + A + RA ALE + R+ + + Sbjct: 419 ENCALERREEGIIYLQLAPSMANLHSKRAEERLQQALEEYYGEAIQLIIRIADSTLGTDT 478 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALE 502 + K+E W+ ++ + A KAL + Sbjct: 479 VASRRKQEDATWQ--QAAVESIQNDANIKALSETFN 512 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 3/154 (1%) Query: 493 TPKALKKALEHEKTPELAAKLAAEAIE-RDPWAAQVSQLSLPKLVEQVALNAWKE-ESDN 550 T +K P LA + + + D W V+QL L + Q+A N E + Sbjct: 370 TNPKPEKTGLASSDPPLAQETTSPPLSGNDHWPGLVTQLKLTAIARQLAENCALERREEG 429 Query: 551 AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP-AVRTPLEWRQAIYEE 609 + L L S +L+++ A+++L +AL G ++L I D+ T R+ Sbjct: 430 IIYLQLAPSMANLHSKRAEERLQQALEEYYGEAIQLIIRIADSTLGTDTVASRRKQEDAT 489 Query: 610 KLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 A ESI D NI+ L F+A L +S+RP+ Sbjct: 490 WQQAAVESIQNDANIKALSETFNARLPLDSVRPL 523 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 167/483 (34%), Positives = 242/483 (50%), Gaps = 23/483 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRPQTF D+VGQEH+ LAN ++ G I HAYLF+G RG GKTS A++LAK Sbjct: 1 MAYIALYRKWRPQTFKDLVGQEHISRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCG C+ CR+I G +D+ EIDAAS +++ RDL + V++AP GR+ Sbjct: 61 ALNCEHGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ K+P TI SRC ++ K + V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I +L +I E + E AL ++A A+G +RDALS+ DQ A +G ++ + V + Sbjct: 181 EEIESRLRYITAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALAEGTITAERVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D + +A+ N + + ++ E G + + +L E+ L + + Q + Sbjct: 241 LGLVGHDWIYKMTKALAARNVQEALQILAELLRDGKDLKQILSELSLHLRSLMIFQAAGT 300 Query: 301 ALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D+ A +++ A+ P + L E+ ++P R+ VE+ L+ Sbjct: 301 VEAMDLYAEPQDVLQDQAKLFAPEVLPRMIARLHEAMTEMKWSPQPRITVEVALMELC-- 358 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 PE Q A A + P ++ A Q Sbjct: 359 -----RPELVASTQENAGQAASNGPRAASSNPADEAR-----------IAKLEAALAQVT 402 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 ++ AT PA A P A E+ A EA Sbjct: 403 ALLKQATAGAGVRPAVA----PATGVPTPAPAPAAAPAVTPAPADVPEEPAALDEAGLQV 458 Query: 480 ATT 482 Sbjct: 459 WNQ 461 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 168/445 (37%), Positives = 240/445 (53%), Gaps = 25/445 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLARKWRPQ F DVVGQ+HV+ L N + RI HA+LFSG RGVGKTSIAR+LAK Sbjct: 1 MDYLVLARKWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G TPC VC NCREI +G +D+ EID AS +++ R+L + +++ P R+ Sbjct: 61 AINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+R +FNALLKTLEEPP HV F+ ATT+ K+P TILSRC F + L + Sbjct: 121 KVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL I E I L +A A +GS+RD+ S+ DQ I+ + +AV + Sbjct: 181 RQIAEQLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEEL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG D L EA++ + + + ++ E G++ +L + +V++ Sbjct: 241 LGRTDRRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGP 300 Query: 300 -----AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 GND++ IE ++ E++R +Q LL + + + R+ +E + Sbjct: 301 QQELLDLPGNDLSGIEAQVAEVSR----ETLQQLLDILLAEEESARRSHNPRLHLEAIVC 356 Query: 355 RALAFHPRMPLPEP-------EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV---- 403 R P +P+ E E S AP V P S P + TV Sbjct: 357 RMAGLPPALPIEEILSRMEDLETRLASSAPCLSETVPGAASFSP---SKPGNSTTVRERP 413 Query: 404 -PLPETTSQVLAARQQLQRVQGATK 427 LP ++ + R+ + +QGA + Sbjct: 414 LTLPIVRTEDRSVREPMAELQGAVR 438 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 137/361 (37%), Positives = 218/361 (60%), Gaps = 3/361 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++LA+ Sbjct: 1 MGYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PC C CR I +G +++IEIDAAS V++ R++ + V Y P G++ Sbjct: 61 AVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTTGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 + I +L+ ++++E E +A++ +A+AA+GS+RDALSL DQ IA +++ + V Sbjct: 181 DTIAARLQELMDKEGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLGEKLTYEKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS- 298 LG +D ++ +++ + + ++E +G E + + + L + ++ S Sbjct: 241 NLGAVDTQVFSRMLRQILQQDTAGTIKTLDEIIIQGRELGQFVTDFIWYLRNLLLISTSE 300 Query: 299 -PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 P + A RM+E + + + Y + ++ YA +R+ VE+ L++ Sbjct: 301 HPEEAVDASAENLERMKEESSMVDAETLMRYIRIFSELSNQIKYASQKRVLVEIALIKLC 360 Query: 358 A 358 Sbjct: 361 Q 361 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 152/441 (34%), Positives = 247/441 (56%), Gaps = 15/441 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT++A++ AK Sbjct: 1 MSYQALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C +CR I +G +++IEIDAAS V++ R + + V Y P GR+ Sbjct: 61 AVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 + I +L ++ +EH+ E RA++ +A+A +GS+RDALSL DQ IA +++ + V Sbjct: 181 DTIASRLSDLMEQEHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFHLGEKLTYENVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D + L+ +++ + + ++ E G E L+ + + + ++Q S Sbjct: 241 VLGAVDTEVFSRLLRRILDEDVTGAIRILGELIDEGRELSQLVNDFTWYMRNLLLLQSSD 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E A + P + Y + ++ +A +R+ VE+ +++ Sbjct: 301 DMEEVLDISKDNLEALKEEAALVKPETLIRYIRVFSELSSQVKFASQKRIMVEIAIIKLC 360 Query: 358 AFHPRMPLPEPEVPRQSFA---------PVAPTAVMTPT-QVPPQPQSAPQQAPTVPLPE 407 P+M V + + P+A A T Q + ++ +P+ Sbjct: 361 --RPQMEKSYDSVLDRINSIEKKLEKGIPIAAQAAQTQDMQQAAASEPIVKKELPKAIPQ 418 Query: 408 TTSQVLAARQQLQRVQGATKA 428 S+++ + + GAT Sbjct: 419 DISELMKHWKSILSEMGATSK 439 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 192/597 (32%), Positives = 285/597 (47%), Gaps = 42/597 (7%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 M+ YQ L R+WRP+TFA+VVGQEH+ L N L GR+ HAYLF G RG GKTS A++LA Sbjct: 1 MAQYQALYRQWRPRTFAEVVGQEHITRTLRNALRTGRLVHAYLFCGPRGTGKTSTAKILA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 + +NC PC C NCR I G +D++E+DAAS +++ R+L++ + P GR Sbjct: 61 RAINCLAPREGEPCNECANCRRILAGNSLDVLEMDAASNRGIDEIRNLIEKIPLGPVEGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDEVHML++ +FNALLKTLEEPP H F+LATT+P+K+ TILSRC +F L Sbjct: 121 YKVYIIDEVHMLTQEAFNALLKTLEEPPAHAVFILATTEPRKVLPTILSRCQRFDFHPLT 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD-GQVSTQAVS 238 V+ I +L+ + + EP AL LL+R A G LRDALSL DQ +ASG G V+ V+ Sbjct: 181 VQAIAGRLQEVAAANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASGTRGPVTAGQVA 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 LGT D L+L +A+ +G V+ L+++A A GIE LL ++L + ++++ Sbjct: 241 VTLGTARLDTLLALTDALATGDGAGVLNLVDKALASGIEPRRLLEDLLDHTRNLLLLKVD 300 Query: 299 PAA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P A L + ++ AR + + L G L + R+ +EMTL Sbjct: 301 PGAGSLTGLLPEEVEQVAAQARQFDHHRLLDLMERLQQGGAALRRSNQPRVILEMTLAGF 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L VAP + A A P T + +A R Sbjct: 361 L--------------------VAPGPSLEGLARRVAELEARLAALEGSAPSRTREKVATR 400 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q + + A S R + +A + A Sbjct: 401 NQGEGGRPPVAPGSRADAGGQERGNSGPLEAPGAGSPAGRARVINRSREFPQAAGRDRAG 460 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 T + A+P L+ A+ E PE+ A AA+ + L + Sbjct: 461 LAGPETATGLEPGSPASP-GLELAVVQEHWPEVLA------------AARRESIQLQAFL 507 Query: 537 EQVALNAWKEESDNAVCLHLRSSQ--RHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + A + + L +++ L G +QK+ +AL+ + G +++ I Sbjct: 508 REGEPVAI---DGDTLTLAVKADFHRGMLEQPGNRQKVEKALAAVFGRPLKVVITSG 561 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 241/467 (51%), Positives = 299/467 (64%), Gaps = 7/467 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ HVL AL N L R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITATPCG C CREI +GRFVDLIE+DAASRTKV+DTR++LDNVQY P+RGRF Sbjct: 61 GLNCEQGITATPCGQCSACREIAEGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ QL +L+ E + + AL LLA+AA GS+RDALSLTDQAIA G G+V V M Sbjct: 181 PQIQAQLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLAQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D Q L+L +A+ + + E ++ A G + + +L +L LLH+I++ Q +PA Sbjct: 241 LGAIDKGQILNLFDALCQGDIETLLTTARTAMGFGADADEVLRALLELLHQISLAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ + A+ + P +QLYYQ LL GRK+LPYAPD G+EM+LLRA+ F Sbjct: 301 TAS--ISDNGAAVLAWAQALKPEQVQLYYQILLSGRKDLPYAPDPASGLEMSLLRAVGFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ QS V+ + + +SAPQ T +AA Sbjct: 359 PEKPVS----RWQSGEGVSAAEALKLVAPSTEGKSAPQADTAPNHAVVTETPVAAAVPQA 414 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE 467 + +T + T P A + + Sbjct: 415 GI-ASTLVAGTHSPVRTTEEPAVKADSSVATEEAPSGDDDVHEAESD 460 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 106/307 (34%), Gaps = 41/307 (13%) Query: 369 EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKA 428 ++ + P + + A Q+ TVP+ T+ Q + GA A Sbjct: 583 DLLSGITSEAKEDEAKKPVSSFERRRMAVQETSTVPV---TTAPTDKGTQDEISLGAMSA 639 Query: 429 KKSEPAAATRARPVNNAALERLASVTDRVQAR--PVPSALEKAPAKKEAYRWK-ATTPVM 485 V+ A +A+ DR P KAP Y + PV Sbjct: 640 NTQTATLTQATASVSGAD---VAADYDRPPWEDTATPDDSSKAPELALDYAVNRESAPVN 696 Query: 486 QQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD------------------------ 521 + A P+ A H +TP+ + A++ Sbjct: 697 AESPDKAHPEEYTSAAPHTQTPQPLKAESQTALQAKGQTHTDEVSSSDGVHCANHSAASP 756 Query: 522 --------PWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLA 573 W + L + V Q+A+N+ N + L L+ Q+HL A +L Sbjct: 757 IGGDETDLRWYKLMGALEIGGRVRQLAVNSVCLAWSNPIPLVLKQDQKHLAAPVAIGQLN 816 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 EALS G E+ + + P TPL+ R + E L+ AR ++ D + L + A Sbjct: 817 EALSKALGHEAEIALEVGEVPGRETPLDIRARFHRELLSDARGALNTDPAVLRLMQQAGA 876 Query: 634 ELDEESI 640 D++SI Sbjct: 877 WFDDDSI 883 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 167/442 (37%), Positives = 247/442 (55%), Gaps = 3/442 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ+F D+VGQEHV L N + GR+HHA+LF+G RGVGKTS AR+ AK Sbjct: 1 MSYLVLARKYRPQSFDDLVGQEHVSQTLGNAIKTGRVHHAFLFTGARGVGKTSAARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++ PC VC +CREI G+ +D+ EID AS T V+D R+L +N++Y P+R R+ Sbjct: 61 ALNCEQGLSPQPCNVCQSCREISAGQGLDVFEIDGASNTGVDDIRELRENIRYLPSRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPPEH KF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I+ R+L L+AR EGS+RDA S DQ IA V V + Sbjct: 181 PLIVARLKEIAAAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +D + +E+++ + R++ + G + E++ L + ++++ Sbjct: 241 LGMVDRRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVETLRSLVVLKVVPE 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P AL + +R L+ T+ D++ L+ EL + R+ +EM LLR LA Sbjct: 301 PEALLDATPDELEELRRLSATVELEDLERAVTVLVRTEAELAGSSFPRLALEMALLR-LA 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P V + + + P + A ++ P + Sbjct: 360 HLPSGRDVATLVRQVEDLQRRLESGVPPAERAQPASYASSESIVAERPAPAPVQAQVPEP 419 Query: 419 LQRVQGATKAKKSEPAAATRAR 440 Q A K S+ A ++ + Sbjct: 420 AQSTAVAAAGKGSDAQAESKPQ 441 >UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q609A7_METCA Length = 547 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 224/399 (56%), Positives = 280/399 (70%), Gaps = 2/399 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ LARKWRP F +VVGQEHV+ AL + L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MLYQALARKWRPHNFTEVVGQEHVVKALTHALEAGRMHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE A PCG C CRE+++GRF+DLIE+DAASRTKVEDTRDLLDNVQYAP +GR+ Sbjct: 61 ALNCEDRQGANPCGRCLICREVDEGRFIDLIEVDAASRTKVEDTRDLLDNVQYAPNQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQK+PVT+LSRCLQF+LK L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQFNLKRLTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR Q+ IL E I EP A + LARAA+GS+RD LSL DQAIA G+++ VSAM Sbjct: 181 EQIRAQMAQILASESIDFEPAATKALARAAQGSMRDGLSLLDQAIAHCGGRLTNTGVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ + +EA+ E+ + ++A+ A +++ ++ ++L +LH+IA+ Q +P Sbjct: 241 LGTVSREPVYGALEALAESRADELLAVSATLAEFSPDYQDVVQQLLAILHQIAIAQFAPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D A R+ LAR + P D QLYYQ L G+K+L APD R G EM LLR LAF Sbjct: 301 AIRQDDEA--ERVLTLARCLTPEDTQLYYQIALQGQKDLQLAPDPRDGFEMLLLRMLAFR 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 P P + + AP T + P + + +Q Sbjct: 359 PHSAEAAPRIVPTAAAPAMRAPSDTGIREPHRAREVTRQ 397 Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 2/123 (1%) Query: 522 PWAAQVSQLSLPKLVEQVALNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 W + + L + Q+A + +++A L L Q ++ L AL L Sbjct: 421 NWPRMIEAMRLAGMTRQLASHCVLRTLTEHACELALDPRQAQIHTPTVTSNLETALQKLL 480 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 G ++LTI ++ TP Q E+ +A I D + L+ F A++ S Sbjct: 481 GRPIKLTI-RCESLDAETPAAADQRAQIERQREAELEIENDATVHALKDMFGAQIVAGST 539 Query: 641 RPI 643 RP+ Sbjct: 540 RPL 542 >UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 Tax=cellular organisms RepID=A9BMI7_DELAS Length = 731 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 249/733 (33%), Positives = 346/733 (47%), Gaps = 96/733 (13%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F+++VGQEHV+ AL N L+ R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYLVLARKYRPRNFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC+ GITATPCGVC C EI+ GRF D E+DAAS V++ + LL+ Y P Sbjct: 61 SLNCQGADGQGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQSLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 +GRFKV++IDEVHML+ +FNA+LKTLEEPPE++KF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 + + E + L +L +E +A EP+AL+LL+RAA GS+RDALSLTDQAIA G GQ+ Sbjct: 181 RPMAPETVLEHLGQVLGQEGVASEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEA 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V MLG++D L+EA+ +A+G+ V+ G+ + L EM +L R+A+ Sbjct: 241 TVRQMLGSVDRSHVFRLIEALAQADGQVVVETSEALRRNGLSAASTLEEMCAVLQRMAVA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q P + + LA +P + QL Y L GR EL APD + M LLR Sbjct: 301 QAVPQMAADASDPEAAEIARLAVLMPRDETQLLYSICLHGRAELGLAPDEYAALTMALLR 360 Query: 356 AL-------------------AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA 396 L A P PE P P P P Sbjct: 361 LLAFKPQSAEPAPGAAEKKTPALTPSTAKPESPAPVAQARPAQPAVPEAPAAPAKAAMPV 420 Query: 397 PQQAPTV------------------------------------------PLPETTSQVLA 414 P P P P A Sbjct: 421 PVAPPAPVAPVAPAASPVTAAPAVVAPVVQAVAAAAPVQAPVAVAAVARPEPVLAPVQEA 480 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 VQ A + + P PV++ + +S + QA+ + E A A Sbjct: 481 RPSAAPEVQPAARVAQG-PLDEPVDEPVDDVQEDEDSSADEAPQAQDADAPDEGAWAGMP 539 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELA-------------------AKLAA 515 W ++ P A A + E + A Sbjct: 540 DEGWADEGRWSDDGDLALEPPAAAVARQAEPQIDTQIDVQDFAPERGRHSPGAPPAPTVE 599 Query: 516 EAIERDPWAAQVSQL----SLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQ 570 E D W A V QL ++ L Q+AL + +A L + SS L ++ Sbjct: 600 RTPEGDVWHAAVQQLVQAEAVTALARQLALQSQLVARDGDAWTLRVESS--SLAQPATRE 657 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 +L AL G +L + + V +P E+ A + ++ + +QTL R Sbjct: 658 RLRAALEAA-GLARQLHVEQG--AVVDSPARRNAVASHERQRIAEDIVMNHSLVQTLIRS 714 Query: 631 FDAELDEESIRPI 643 A++ SI+P+ Sbjct: 715 HGAKIVPGSIKPV 727 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 270/521 (51%), Positives = 335/521 (64%), Gaps = 11/521 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVLTAL N L GR+HHAYL SGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++ PCGVCD CREI+QG FVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLP+TILSRCLQFHLK+LD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QLE +L++E EPRAL LA+AA+GS+RDALSLTDQA+A G+G V ++V AM Sbjct: 181 TQIAKQLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+EA++ + MA I E A G +++ L E+ GLLHR+AM QL PA Sbjct: 241 LGTLDHRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A E + +LA+ + P ++QL YQ +L GRK+LP+APD R +EMT LR LAF Sbjct: 301 TVQEQGADAE-SLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTSLEMTCLRMLAFS 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PR E + V P ++ V P + A + P T A Sbjct: 360 PR-----REAVHPANLTVLPPSMAGGMGVAPAQLGKSRGADSAPTLATAIVAPPAAPGSV 414 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE---KAPAKKEAYR 477 V+ A A A + L++ Q + A + +A +A Sbjct: 415 SVEHTATQMVPLVAHAVLETDEQEMASDALSAPLFVEQDELLREAQQMGYEAQPVMDAPS 474 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAI 518 +T V + + P + A+ E+ E+ A++ AE++ Sbjct: 475 APISTVVAADEAMQHLPSDM--AVAAEQPTEVPAEIVAESV 513 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 115/311 (36%), Gaps = 27/311 (8%) Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVM-TPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P P+ PE + V P + V P SAP A P + + Sbjct: 553 APIKPVAAPEGRPVAQPAVTPPSAPWQGAAVAPVHHSAPVTAYDELPPLDAYDEGGSDYE 612 Query: 419 LQRVQGATKAKKSEP------------------------AAATRARPVNNAALERLASVT 454 QG ++ S A TRARP + T Sbjct: 613 EYLNQGFGESAASASMANVAQTAASGASAVPAYGQAAPAQAPTRARPNPDDLPPWDLDGT 672 Query: 455 DRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLA 514 +A+ P+ AP +A P++ L+ + E+ E+A + Sbjct: 673 PAARAQVAPAVSSAAPVMPQAVATSEPAPMVDSVMETIDWDELESDNQPEEGEEVARLIP 732 Query: 515 AEAIER--DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKL 572 + + DPWA +++ + + Q+A+N+ + V L L+ QRHL + A+ L Sbjct: 733 SSLLVNCDDPWAELIARTGVGGRLRQLAINSVMTRQGDKVLLTLKPEQRHLVSDRARVDL 792 Query: 573 AEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 AE + G V++ + P TPLE +Y Q + D N+Q LR+ F Sbjct: 793 AEIIGPELGQAVQVEVTLGTVPDQETPLEIEHRLYLGVREQVSRDLEQDPNVQFLRQRFG 852 Query: 633 AELDEESIRPI 643 A L +ESI P+ Sbjct: 853 AVLHQESIEPL 863 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 172/652 (26%), Positives = 286/652 (43%), Gaps = 50/652 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPATFDTVVGQRALTTTLKNAIANQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC C C++CR + R ++ E+DAAS VED R L++ V+ P G++ Sbjct: 63 INCLHPTADGEACNECESCRAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 LE++ +EHI EP AL ++A+ A+G +RDALS+ DQ ++ +G ++ Q+V Sbjct: 183 NDTVEHLENVARKEHIEAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGHITYQSVIEN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L +A +E + NE +G + + + + + + Sbjct: 243 LNVLDYEYYFKLTDAFLENRVSDCLLTFNEVLKKGFDGNHFITGLTSHFRDLLVSRDDET 302 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA--L 357 L A+I R + A+ P + + + ++R+ VE+TL++ L Sbjct: 303 LQLLEVGASIRDRYQAQAQKCSPQFLYKAMKLCNDCDLNYRVSKNKRLLVELTLIQLAQL 362 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 +P +Q+ P + + Q + + P P+ T +V Sbjct: 363 TGDNDVPGGGQGPTKQTLKPAFNQGQPSSSSS--------QASNSQPYPQATHEVSGNY- 413 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 G+T K+ + P +AA+++ A+ T V A PS + KA +K+ Sbjct: 414 ------GSTAPKQPAK----PSAPNGSAAVQQPAAPTTNVSAAAHPSPIPKANTEKKIPV 463 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP-----WAAQVSQLSL 532 KA + + + P+A + A + + I + W ++L Sbjct: 464 MKAGSIGISIRRQAVQPQAANNGPVNTAATVPADQTYEDYIFNEKNLNYYWREFATRLP- 522 Query: 533 PKLVEQVALNAWKEESDNAVCL--------HLRSSQRHLNNRGAQQKLAEALSMLK-GST 583 ++ A NA + + L + + ++ L Sbjct: 523 ----KEEAANAARMMNMQPHLLKDQTTFEVAVDNDMVQKYMSQLAPQIETHLRQQLHNRK 578 Query: 584 VELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 +++T+ + + ++ L+ F EL Sbjct: 579 IKMTVRVSAANENLRAYSHVERFQMMS--------KKNPSLLKLKEAFGLEL 622 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 144/360 (40%), Positives = 218/360 (60%), Gaps = 3/360 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++ AK Sbjct: 1 MSYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C CR I G +++IEIDAAS V++ R + + V+Y P G++ Sbjct: 61 AVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 E I +L ++ +E + E RA++ +A+AA+GS+RDALSL DQ IA GQ ++ V Sbjct: 181 ETISARLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG +D + L+ ++E N + +I+E G E + + L + +VQ S Sbjct: 241 TLGAVDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSSD 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E A+ + + Y + ++ YA +R+ +E+ +++ Sbjct: 301 DMEDVLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIRYAVQKRILIEIAVIKLC 360 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 149/432 (34%), Positives = 235/432 (54%), Gaps = 4/432 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I ++ I++ E + E +L+++A AA+G +RDALSL DQAI+ + + + Sbjct: 181 QAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L +++ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPG 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-- 357 G + ++ REL+ IP + L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT 360 Query: 358 AFHPRMPLPEPEVPRQSFAPV-APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + LPE ++ + + + T + +S ++AP VP ++ Sbjct: 361 SHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESPKKEAPRVPKGGKSNYKAPVG 420 Query: 417 QQLQRVQGATKA 428 + + ++ AT+ Sbjct: 421 RIHEILKEATRP 432 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 206/405 (50%), Positives = 264/405 (65%), Gaps = 7/405 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC GITA PCG C C EI+ GRFVD IE+DAAS V++ LLD YAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+HIL +E I+H+ AL+LLA+AA GS+RDALSLTDQAIA GQVS + Sbjct: 181 KQMPPGHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG +D + L++A+ +G ++ + + A R + + L ++ LLH++A+ Sbjct: 241 AVRGMLGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PA++ ++ E +R LAR + QL+YQ +GR EL APD G MTLLR Sbjct: 301 QAVPASVQDEWPEAED-VRRLARQFDAQETQLFYQIANLGRSELALAPDEYAGFTMTLLR 359 Query: 356 ALAFHPRM-PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 LAF P P V T P P++ Sbjct: 360 MLAFRPSTAPASSVGGQGGGGQQVVRPRPAGTTSAAPSPRAMASA 404 Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 58/184 (31%), Gaps = 13/184 (7%) Query: 459 ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAI 518 R +A + AP + A P + A P+ A E P Sbjct: 622 DRAPRAARKPAPTQSAAKPISKPEPEPAAQLAPAVPQVAPSAGEDGTPPVFT-------- 673 Query: 519 ERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSM 578 W + L L L +Q+A + LHLR + ++L AL Sbjct: 674 --GDWPEFAATLPLKGLAQQLAHQSELHRVVGR-TLHLRVPVAAIAEANVAERLQAALVE 730 Query: 579 LKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEE 638 V + V T A E+ +A I D +Q L R F ++ Sbjct: 731 HFRVDVRVQCVVGGVT--HTAAAVDAAARAERQREAEAEIDRDPFVQGLLREFGGQIVPG 788 Query: 639 SIRP 642 SI+P Sbjct: 789 SIQP 792 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 211/514 (41%), Positives = 302/514 (58%), Gaps = 20/514 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQEHV AL N + R+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPKNFHELLGQEHVSKALINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+ PCGVC C+ I+ GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GR+KV Sbjct: 62 NCETGVTSEPCGVCGVCQSIDSGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ILN+E I++E AL L+ +A+GS+RDALSLTDQAIA G+G V+ + + MLG Sbjct: 182 LAEYLGTILNKEQISYESDALWQLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D ++++ + + N +++ I + ++ +A+ + LH++A++Q P Sbjct: 242 LIDQADVIAILANIYQQNTQQLTQSIQLLREQVVDAKAVFDRLAETLHQLAILQALPNFD 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 ++++LA+ +P +QLYY ++ R+ L A +EM LLR +AF P Sbjct: 302 LQINRQQSEQLQQLAQKLPAELLQLYYDIVVKSRENLALANTPMQALEMCLLRLMAFKP- 360 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 ++ + P P P+ QS Q+P + +TT + +Q Sbjct: 361 --------LHRNQISLRP-----PIANNPESQSLDSQSPDFKIVDTTPS-----EAIQGA 402 Query: 423 QGATKAKKS-EPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 + + A+ S + + +++ L + AS D +Q S + + Sbjct: 403 KSSVLAEDSLQLTSEQSDNNLSDDNLLKSASNVDSIQQIIEESIQQGTEQQAFDDSHLIA 462 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 ++ + +L + Sbjct: 463 IDEAAVNTPTQQTPTIEDDAVANRLSDLQPSDSH 496 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 137/355 (38%), Positives = 210/355 (59%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D+ SL++ M + + +++ + GI+ L + +L + + + L Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E + + + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRYAISPLTLLEVTILRLI 356 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 223/489 (45%), Positives = 297/489 (60%), Gaps = 7/489 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPRRFADLVGQEHVVRALSNALAGQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++++N QYAP GR+ Sbjct: 61 SLNCERGVGAEPCGECAACRQIDAGRFVDLLEIDAASNTGIDNIREVIENAQYAPTAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFALRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L E I E AL LLARAA GS+RDALSL DQAIA G+G V V AM Sbjct: 181 QQVSGHLAHVLATEGIEFESPALALLARAASGSMRDALSLLDQAIAYGEGVVREDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+ A+ + +G V+ E AARGI ++A L E+ L ++IA++Q P Sbjct: 241 LGAVDRRYLFTLLAALADGDGAAVLDEARELAARGIGFDAALEELAQLFYQIALMQAVPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D E + LA ++ P D+QLYYQ + G ++LP APD ++G M LLR LAFH Sbjct: 301 AIADDEPEREA-LAALAGSMAPEDVQLYYQMAVQGGRDLPLAPDEQLGFNMALLRMLAFH 359 Query: 361 PRM-----PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 P+ P + P AP + + +A ++ A Sbjct: 360 PQTGSPALAAPAAVAGGIASPPQAPAGMTAGARPAAPAGTATDDDDDPASGRGAARAAIA 419 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE-KAPAKKE 474 + + + A A + D Q VP+ AP Sbjct: 420 KALRRSPVERPVVATRQAVPADTPVESGLPATTGTSRPGDTGQPASVPAGTTAPAPVPAS 479 Query: 475 AYRWKATTP 483 A ++ P Sbjct: 480 ASGLDSSLP 488 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 90/250 (36%), Gaps = 10/250 (4%) Query: 397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDR 456 P++ P PE + A + ++ G +A + A AA + + Sbjct: 524 PEREPAASTPEVPAGASPAGEAVRLASGPAEALPWDDETAHGLNADEQAAHDDMFGAPAE 583 Query: 457 VQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE 516 + PV S+ + TP + P A+ E + + +A Sbjct: 584 PASVPVSSSGQAVTT------APDVTPPADVRAPDVMPDAVAVPAESAEALAASGPVATG 637 Query: 517 AIERDPWAAQVSQL--SLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLA 573 W A V L SL +A NA V L L + R + + LA Sbjct: 638 TGLTGDWIALVDTLKDSLGAKARLLAQNAELVAREGELVRLRLPGAHRFVAGADYRSALA 697 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 +AL+ G V + + D T L R + EKL AR +I D + L+R F A Sbjct: 698 DALATHWGQPVRIEVEIGDVVG-ETHLMQRARVQGEKLELARSAIEQDPRVAELKREFGA 756 Query: 634 ELDEESIRPI 643 + ESI+P+ Sbjct: 757 VVVPESIQPL 766 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 137/355 (38%), Positives = 210/355 (59%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D+ SL++ M + + +++ + GI+ L + +L + + + L Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E + + + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRYAISPLTLLEVTILRLI 356 >UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Coxiella burnetii RepID=B6J935_COXB1 Length = 509 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 229/505 (45%), Positives = 311/505 (61%), Gaps = 4/505 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++QVLARKWRP+ F +V+GQ V+ AL+N L +HHAYLF+GTRGVGKT+I+R+LAK Sbjct: 1 MAHQVLARKWRPRCFQEVIGQAPVVRALSNALDQQYLHHAYLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PC C+NCREI++GRF DL E+DAASRTKVEDTR+LLDN+ YAP +GRF Sbjct: 61 CLNCEKGVSANPCNDCENCREIDEGRFPDLFEVDAASRTKVEDTRELLDNIPYAPTKGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKF+LATTD KLPVT+LSRCLQFHL L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPSHVKFILATTDHHKLPVTVLSRCLQFHLAQLPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +H+L EE++ E AL LLARAA GS+RDALSL DQ+IA G+G+V V M Sbjct: 181 LQIAAHCQHLLKEENVEFENAALDLLARAANGSVRDALSLLDQSIAYGNGKVLIADVKTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ ++EA+ G+R++ + +G+++ L ++L LLH+IA++Q P Sbjct: 241 LGTIEPLLLFDILEALAAKAGDRLLGCVTRLVEQGVDFSNALADLLSLLHQIAIIQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + ++R+LA+ + D+QL+YQ LIG+++L Y+P + G EMTLLR LAF+ Sbjct: 301 AL---IENDSEQLRQLAKLLDREDVQLFYQIGLIGQRDLAYSPTPQTGFEMTLLRMLAFY 357 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P PE + A V PT + T P T+ L + S +L Sbjct: 358 PSAANAIPETESKE-AVVTPTPKSSETSWPQLLSQLKLTGATLALAQQCSLKELTDNRLY 416 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + + R V + R +V + + A K + + +A Sbjct: 417 LMLNPKQKPLLQQKHIERISEVLSEHFNRTITVKIDISNHQTETPAALAQKKAQDRQTEA 476 Query: 481 TTPVMQQKEVVATPKALKKALEHEK 505 +M ++V + L E Sbjct: 477 EKRMMNDRQVQRIMQTFDATLVKES 501 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 4/150 (2%) Query: 494 PKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAV 552 P A E E + + W +SQL L +A +E +DN + Sbjct: 358 PSAANAIPETESKEAVVTPTPKSSET--SWPQLLSQLKLTGATLALAQQCSLKELTDNRL 415 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 L L Q+ L + ++++E LS T+ + I N TP Q +++ Sbjct: 416 YLMLNPKQKPLLQQKHIERISEVLSEHFNRTITVKIDI-SNHQTETPAALAQKKAQDRQT 474 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIRP 642 +A + ++ D +Q + + FDA L +ESI P Sbjct: 475 EAEKRMMNDRQVQRIMQTFDATLVKESIVP 504 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 156/519 (30%), Positives = 275/519 (52%), Gaps = 29/519 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ L R+WRP+ F D+VGQEHV+T L N +S RI HAYLFSG RG GKTS+A++ AK Sbjct: 1 MDYQALYRQWRPKYFRDLVGQEHVVTTLKNAISQSRISHAYLFSGPRGTGKTSVAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG C C E ++G F+D++EIDAAS +++ R++ D+V Y+P+ G + Sbjct: 61 ALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPP++V F+LATT+P KLP+T+LSRC +F L Sbjct: 121 KVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTEPHKLPMTVLSRCQRFDFYRLST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--GDGQVSTQAVS 238 +I QL+++++ ++++ +L ++A+ ++G +RDALSL DQ+++ Q+ V Sbjct: 181 SKIEKQLQNVIDSKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGSGEQLKVDHVL 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 + GT+ +D L+ A+ E + +++ ++ + + G ++ L +++ L + + +L Sbjct: 241 EVTGTVSEDTFYDLLMALKEGDLAQILNIVQQLSDSGKDFGQFLNDLIVYLRDLLLFKLK 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL- 357 + +++ +++L + ++ L ++ + ++ +RR+ VEM R + Sbjct: 301 GPSDQLLWGSVD-SVKKLHKYFTKDELISMIDFLSEKQQAMKWSQNRRLIVEMAFYRIIN 359 Query: 358 ----AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 +F E + V T + + A L + +S L Sbjct: 360 KYNTSFEAEYKEKETKQKNNEETNDKSLKVQQTTSIESVESENKENA---KLQDQSS--L 414 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 + Q + +K S ++ +++ + D++ + + K Sbjct: 415 PKQTDDQSNKNNDSSKLSR----------EDSDIQQSETKKDKMTEQQEATVQNDLNLKI 464 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAK 512 +W A ++Q++V A AL E P + Sbjct: 465 VTEQWDAVLEKLKQRKVTA------HALVFEGKPVDVKE 497 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 162/457 (35%), Positives = 241/457 (52%), Gaps = 9/457 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q+ V L N ++ GR+ HA LF+G RG GKT+IAR+LAK Sbjct: 1 MSYLVLARKYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G T TPC C +C EI G D+ EID AS V+ R+L NV++ PA + Sbjct: 61 AMNCEKGPTPTPCCACRSCLEIASGNATDVFEIDGASNNSVDQVRELRGNVKFMPAHSPY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP HV F ATT+P K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + LE + +E+I E ++L+L+A A GS+RD+LSL DQ ++S G VS + V Sbjct: 181 DPLVAHLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +D + L A++ + + +++ G + + EMLG + MV+L Sbjct: 241 LGIIDREVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHFRDLLMVKLGVR 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + +M+ R + + +L + ++ ++ VEM ++ L Sbjct: 301 AERLASLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKLLH 360 Query: 359 FHPRMPLP----EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 P +P+ + + R+SFA +A T +AP++ + S+ Sbjct: 361 TKPVLPIDTLIQKVDALRKSFAQLAGNGNAPATASKD---AAPERNADGAAGVSASRPAQ 417 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA 451 AR Q + PV + + Sbjct: 418 ARPAPTENQPRPSSPPPASPLPEETGPVATGTTDPVP 454 >UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Bacteroidales RepID=C6ITP2_9BACE Length = 619 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 169/641 (26%), Positives = 287/641 (44%), Gaps = 32/641 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGIT-ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T T C C++C + R ++ E+DAAS V+D R L++ V+ P G++ Sbjct: 63 INCMTPTTDGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ +E+I EP AL ++A A+G +RDALS+ DQ ++ G ++ ++V Sbjct: 183 EDTVNHLSYVAAKENITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIEN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L + +E + L N+ +G + + + + + + + Sbjct: 243 LNVLDYEYYFRLTDCFLENRVSDALLLFNDVLNKGFDGSHFITGLSSHCRDLLVSKDAAT 302 Query: 301 A-LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L A+I R +E A+ P + + + ++R+ VE+TL++ Sbjct: 303 LPLLEVGASIRQRYQEQAQKCPLQFLYRAMKLCNDCDLNYRASKNKRLLVELTLIQVAQL 362 Query: 360 HPRM-PLPEPEVPRQSFAPV--APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + P+Q+ PV P A P ++ QQ P + AA Sbjct: 363 TTEGDDVSGGRGPKQTIKPVFTQPAAAQQPQVAS---ATSAQQTTVHTAPSPATAPSAAN 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS--ALEKAPAKKE 474 +++ Q + + + P A P +A + ++ ++ + S K P + + Sbjct: 420 TAVRQPQVSVASGAAAPVNTASA-PSQSAGISSISKEERKIPVMKMSSLGVSIKNPQRDQ 478 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 A + A V Q + + E A +L E + A ++ + Sbjct: 479 AAQNTAKNNVAQVQIQPEEDFIFNDRDLNYYWQEYAGQLPKEQV------AIAKRMQV-- 530 Query: 535 LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 + V LN + + + + + +L L ++ + + Sbjct: 531 -IRPVLLN-----NSTTFEVVVDNEIAAKDFTALIPELQTYLRGRL-KNSKVAMTVRVSE 583 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 T + + +AQ ++++ L+ F EL Sbjct: 584 PTETVRAVGRVEKFQMMAQKNQALMQ------LKDEFGLEL 618 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 139/374 (37%), Positives = 222/374 (59%), Gaps = 8/374 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RKWRP F DV GQ+ ++T L N ++ RI HAYLF GTRG GKTS+A++ AK Sbjct: 17 MSYQALYRKWRPDNFNDVKGQDTIVTTLRNQINADRIGHAYLFCGTRGTGKTSVAKIFAK 76 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PCG C C+ I G +++IEIDAAS V++ R + + VQY+P GRF Sbjct: 77 AVNCEHPVDGNPCGECPTCKAIAAGTSMNVIEIDAASNNGVDNIRQIREEVQYSPTEGRF 136 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 137 KVYIIDEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVAKIPITILSRCQRYDFHRITI 196 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 E I +L ++ E + E +A++ +A+AA+GS+RDALSL DQ +A G+ + + V Sbjct: 197 ETIAGRLSELMKAEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFYLGKDLKYENVLD 256 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D ++ ++ + M+L+ + +G + + + + L + +++ + Sbjct: 257 VLGAVDTAVFSKMLSTILSGDVAVCMSLMEDLIMQGRDLSQFVTDFIWYLRNLLLIKTTK 316 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A + A +++ A+ + + Y + L +L ++ +R+ E+T + Sbjct: 317 DAERIEDVIEVSADNLEDLKKDAQNVDIDTLMYYIRVLSELSNDLKFSTQKRVKTEITFI 376 Query: 355 RALAFHPRMPLPEP 368 + + P M + Sbjct: 377 KLM--RPAMDNSQD 388 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 256/470 (54%), Positives = 313/470 (66%), Gaps = 7/470 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ F +V+GQ+HVL AL+N L GR+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPRNFHEVMGQQHVLQALSNALDQGRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+ PCG C CREI+QG FVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 CLNCETGITSRPCGQCSACREIDQGNFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL Sbjct: 121 KIYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALTR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL+ +L E + +EP AL LLA+AA+GS+RDALSL+DQAIA G+G + + V M Sbjct: 181 EQIVEQLQRVLQAEQLTYEPAALSLLAKAAQGSMRDALSLSDQAIAYGNGLLQAETVQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD Q ++ + +G +M I A +++ L VE+ LLHR AM QL Sbjct: 241 LGTLDHRQLYQILSLLAARDGAALMQQIGSLAELAPDYDQLHVELASLLHRTAMWQLLGQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ LA IPP ++QLYYQ L GRKELP APD R +EMTLLR LAF Sbjct: 301 Q-TEPGADDTEELQLLAEQIPPEELQLYYQITLNGRKELPLAPDGRSALEMTLLRMLAFA 359 Query: 361 PRMPLP----EPEVPRQSFAPVAP--TAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 PR P +P++ ++ AP A P +P AP + + + Q Sbjct: 360 PRAGRPAITEQPQLIHRNTAPAASFVATPARPDVIPAAVPVAPPVTASAAVEDLAMQAKL 419 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS 464 ++Q + + A + + P + A + + +V A P Sbjct: 420 MQEQAELMAQAEQEMQPRPLPVSPPVTEAPAPVAVIPAVAPATPAASGPE 469 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 14/275 (5%) Query: 372 RQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKS 431 R+ A + +TP +P + + + +P ++ +A Q + Q A S Sbjct: 488 RRQQAENQTESHVTPAVMPARIPANRGEIAPLPATAAPARTVA--PQDVQPQVAGNRALS 545 Query: 432 EPAAATRARPVNNAALERL-ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEV 490 + P+ + S D Q PS ++++ R+ + P + Sbjct: 546 DDLPPWELPPLTAYQDQEAFISPVDSEQDNAAPSF-----KQRQSDRFTPSAP----PVM 596 Query: 491 VATPKALKKALEHEKTPELAAKLAAEAI-ERDPWAAQVSQLSLPKLVEQVALNAWKE-ES 548 + P + + E ++ + + + D WA V++L + V Q+A+ A + Sbjct: 597 QSNPAPVSRLPETDEDDDSVWRSNELLLRSSDQWAQTVAKLPVAGRVRQLAMQAVVTDQQ 656 Query: 549 DNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYE 608 ++ L +R+ RHL Q+LAEA+S + + + L + A+ P E Q Sbjct: 657 ADSWHLQIRNEARHLAQPRMVQELAEAISTILPTAINLQVEPVVQLALPCPAEIEQQERI 716 Query: 609 EKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +A +++D N+Q L++ F A LD+ SI+P+ Sbjct: 717 RLQQEAELLLLSDPNVQFLQQRFGATLDDGSIQPL 751 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 151/477 (31%), Positives = 241/477 (50%), Gaps = 8/477 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQVFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC CD C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I++ E + + +L+++A AA+G +RDALSL DQAI+ Q++ + Sbjct: 181 KDIVGRMQKIVDAESLNVQEGSLEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L EA+ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQQFISQLAEAIFDQNIAVALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPD 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 G + ++ L+ + P + + L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDENFVTLSDRVTPQFLYETIEVLNKSHQEMKWTNHPRIFFEVAVVKLCQA 360 Query: 360 HPRMPLPEPEVPRQSFAP-----VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ--V 412 +P + + + VP PQ+ P P+T+++ Sbjct: 361 TAGIPQAHANADLTTLTDKIDRLEQELSRIKAEGVPMSHSQHPQEKKEAPRPQTSNKNGY 420 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 A ++ + K + E + + + S + +A A Sbjct: 421 RAPVGRIHEILKEAKRPELEKIKGKWGELLAHLKQQNKVSHAALLTDSEPVAAATHA 477 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 224/358 (62%), Gaps = 2/358 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 ++ L R +RPQ F DV+GQ+H++ L N + I HAYLF GTRG GKTS A++ ++ + Sbjct: 2 HKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC I PC C+ C + + +D++EIDAAS V+D R+L ++V+Y+PA ++KV Sbjct: 62 NCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS+ +FNALLKTLEEPP +V F+LATT+P K+P TILSRC ++ K + V+ Sbjct: 122 YIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + +++ I +E I + +AL L+AR ++G+LRDALS+ DQ ++ G+ ++ + V ++G Sbjct: 182 MTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP--A 300 +++ +Q L + +VE + ++ + ++NE G + L+ +++ + + ++S Sbjct: 242 SVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELD 301 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + +++ ++ I D+ L I + ++ + + R+ VE+T+++ Sbjct: 302 EIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQ 359 >UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 Tax=Gammaproteobacteria RepID=A1WTL4_HALHL Length = 554 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 219/372 (58%), Positives = 269/372 (72%), Gaps = 1/372 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ LARKWRP+ F DV GQEHVL ALAN L+ GR+HHAYLFSGTRGVGKT++AR+LAK Sbjct: 1 MTYQALARKWRPRRFEDVAGQEHVLRALANALADGRLHHAYLFSGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA PCG CD+CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGRF Sbjct: 61 CLNCEHGITAEPCGTCDSCRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQFHL+ L Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFHLRRLSS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 IR +L + EE + + A LARAA+GSLRDALSL DQA+A G+G V+AM Sbjct: 181 TLIRDRLLALAEEEGVTVDAGAAARLARAADGSLRDALSLLDQALAFGEGAARDDEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG ++ L ++ A+ + +G ++ A +++ L E++ +H +A+ Q P+ Sbjct: 241 LGAIERRHVLEVLTALADGDGAALVTAARHMAEVAADFDEALAELVATVHSLALAQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+G+D + R+ LA I D+QLYYQ + R++LPYAPD G EM LLR AF Sbjct: 301 AIGDDEPERD-RLLALAERIDAEDLQLYYQIGVNARRDLPYAPDPATGFEMALLRMHAFR 359 Query: 361 PRMPLPEPEVPR 372 P P P Sbjct: 360 PAEGAPRVAAPT 371 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 7/122 (5%) Query: 522 PWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 W V L + +A + W V L L S +LNN +++L AL Sbjct: 431 RWTQIVG--GLSGPLRMIAAHCEWVGREGARVILRLDESHEYLNNAERRERLQTALGEAF 488 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 G T+ L I P TP + +E+ A+A +++ D +Q L FD +L + Sbjct: 489 GETITLQIDIG--PTRWTPAMAERQQAQERQAEAEQALAGDPALQGLCEAFDGQLH--GV 544 Query: 641 RP 642 RP Sbjct: 545 RP 546 >UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QAW7_PSYCK Length = 685 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 210/433 (48%), Positives = 282/433 (65%), Gaps = 4/433 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L+K L Sbjct: 5 YQVLARKYRPKNFHELIGQTHVSQALINAIDYNRLHHAYLFTGTRGVGKTTIARILSKCL 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+TGIT+TPCGVCDNC I+QGRF+DLIEIDAASRTKVEDTR+LLDNV YAP++GR+KV Sbjct: 65 NCDTGITSTPCGVCDNCVAIDQGRFIDLIEIDAASRTKVEDTRELLDNVPYAPSQGRYKV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 125 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPITIISRCLQFVLRPLSQSL 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ++L +E + + AL LA AA+GS+RDALSLTDQAIA G G + V++MLG Sbjct: 185 LSEHLANVLTQEQVGYTQPALWQLASAAKGSVRDALSLTDQAIAFGQGALDDVTVNSMLG 244 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D +SL+ + + V A I + A+ ++ ++ + LLH++A+ QL P Sbjct: 245 LIDAADLVSLITDIYNHDKPAVAAHIEQMRAQMVDASSMFDGLAELLHQLALCQLLPEVA 304 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 N A + +LA+ + P +QLYY+ ++ R+ + A +EM +LR LAF P Sbjct: 305 LNVNEAQAQHIDQLAQHMSPDVLQLYYEIVVQAREGVKLASTPMQALEMCILRLLAFRP- 363 Query: 363 MPLPE---PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 +P+ E + A PT ++ + +P S+ + T + + Sbjct: 364 LPVDEILANVLDSTVMAIEKPTTTVSSATLITEPVSSSLELQTQSDNIVYENIDTSVNDK 423 Query: 420 QRVQGATKAKKSE 432 Q V + E Sbjct: 424 QDVGADNSITQHE 436 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 164/477 (34%), Positives = 245/477 (51%), Gaps = 35/477 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A+L AK Sbjct: 1 MSYQALYRVFRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I+ E + + AL ++A AA+G +RDALSL DQA++ +++ + Sbjct: 181 QAIVGRMKKIVEAEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L + E N + +NE +G + L+ +M+ + + Q +P Sbjct: 241 TGAVSQHYIGKLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPD 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-- 357 G + ++ + L+R IP +D+ L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMKWTNHPRIFFEVAVVKLCQG 360 Query: 358 -------AFHPRMPL-------PEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV 403 A P + E E+ R V ++ + +PQ + + A Sbjct: 361 PKAGASAAAQPEVDNLVNKVRQLEQEIERLKTQGVQVSSAPAQAKEASRPQKSIKSAYKA 420 Query: 404 P-------LPETT-----------SQVLAARQQLQRVQGATKAKKSEPAAATRARPV 442 P L + T Q+LA +Q +V A SEP AA+ V Sbjct: 421 PVGRIHEILKDATRPDLEKLKGCWGQLLAQLKQQNKVSHAALLNDSEPVAASSKAFV 477 >UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1W4_ABIDE Length = 522 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 141/378 (37%), Positives = 229/378 (60%), Gaps = 10/378 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP+ F +V GQ+ V+T L N + +I HAY+FSGTRG GKTS+A++ AK Sbjct: 1 MSYTALYRKFRPKGFDEVKGQDSVVTVLKNQIKHEKIGHAYMFSGTRGTGKTSVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE +PCGVC+ C++I +GR +D+IEIDAA+ V++ R++++ V+Y+P ++ Sbjct: 61 AVNCENTKDGSPCGVCETCKKIGEGRTLDVIEIDAATNNGVDNMREVIEEVKYSPTDTKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPE+ F+LATT+P K+ TI SRC ++ + + + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPEYAIFILATTEPHKVLPTIKSRCQKYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 E I +L+ ++++E +E AL+ +AR +GS+RDALSL DQ +A D +++ V Sbjct: 181 ETISDRLKELMDKEGNTYEEEALKFIARKGDGSMRDALSLLDQCLAFSFDEKLTYDKVLN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG++D D L A+ + M + E + GI+ ++ + ++++S Sbjct: 241 VLGSVDTDLFNKLYIAIKRGDVTTCMDIAEEISMNGIDIGQFTLDFTWYFRNLLLLRVSK 300 Query: 300 AALGNDMAAIE--LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 AA + + ++E+A+ D+ Y + ++ Y+ +R +E+ L++ Sbjct: 301 AAADRIEISTDKLAELKEVAKIGEENDLYRYIRIFSKLSADIKYSTSKRAELEIALIKLC 360 Query: 358 AFHPRMPLPEPEVPRQSF 375 PE E R+S Sbjct: 361 -------RPEMEEDRESL 371 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 143/386 (37%), Positives = 212/386 (54%), Gaps = 2/386 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L R WRPQTF D+VGQ H++ L N + R+ HAYLF+G RG GKT+ A++LAK Sbjct: 1 MSHIALYRAWRPQTFQDMVGQRHIIQTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G PC CD CR I G +D+IEIDAAS +++ RD+ D V+YAP+ R+ Sbjct: 61 AVNCERGPAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSEVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + + Sbjct: 121 KVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+ +L I +E I E A+ +AR +EG +RDA+SL +Q A G +++ + Sbjct: 181 EEQSERLFEICRDEGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAFGGSRITLDGAVDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + DQ +L EA+ + N +M L+ G + + ++ + +++L+P Sbjct: 241 TGGMAADQFYALAEAIRDRNVAAIMPLVEGLTQAGKSADKCMENLIFYFRDLLVLKLAPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + R R +A + TL + ++ +A + E+ L++ Sbjct: 301 GAVTERVVDAERFRGMADAFSSERLFKMIDTLNTYQSDMKHASQPQTLFEVALMKICTIG 360 Query: 361 PR--MPLPEPEVPRQSFAPVAPTAVM 384 S P A V Sbjct: 361 NESAGGTGSGGGAATSSPPAASAEVQ 386 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 165/535 (30%), Positives = 262/535 (48%), Gaps = 46/535 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N ++ G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMYRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + PC CD C+ I QG D+IEIDAAS V++ R++ D V+YAP++ ++ Sbjct: 61 AINCPNSVDGEPCNECDICKSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L ++ +HI ++ A+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 DQIIERLRYVAESQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++D+ +L+ + + A ++ A G E L+ +++ + M + Sbjct: 241 TGSVDEASLNALLNDVANGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKT--- 297 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A E L + + + ++ ++ + E+ L++ Sbjct: 298 ------AQRETEYDAL-MAFDLDTLYKMIDLINDTLVSVRFSVNQNVHFEVLLVKM---- 346 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP-----ETTSQVLAA 415 E+ ++ APVA P + QAP+ P P + +S +L Sbjct: 347 -------AELIKEGDAPVAN---------PDMHSANAHQAPSAPQPAQQNNDVSSALLQR 390 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + L++ A K + + N+ R + Q V + K K Sbjct: 391 LEHLEQELNALKQQGVTSTNTPPKQKSNSRGRRRSKNSYSMTQIAKVLDSANKEDIKLLK 450 Query: 476 YRWKA--------TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 W+ + + P A E + A++ E + D Sbjct: 451 DHWQEVIDHAKNHNQKALVSLLQNSIPVAAS---EKSVLVQFEAEIHCEIVNDDD 502 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 178/519 (34%), Positives = 267/519 (51%), Gaps = 21/519 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L K+RP++FA++VGQE + T L N + +I AYLF+G RG GKTS AR+LAK Sbjct: 1 MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC TA PCGVCD C+ I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP HV F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L I ++E+I P A+ L+A+ ++G LRDA SL DQ + G V+ V Sbjct: 181 QLEAMVKHLSAIASKENIHISPEAVTLVAQLSQGGLRDAESLLDQ-LGLLAGVVTPDRVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++GT+ + L L+ A+ + E V+ ++ RG E L + + + + + Sbjct: 240 DLVGTVSEQDLLGLLNAIAQDKPEAVLDSTHKILDRGREPLTFLQNLAAFYRDLLIAKTA 299 Query: 299 PAALGNDMAAIELRMR----ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 P +D+ A + E A+ T I + L ++ + R+ +E+TLL Sbjct: 300 PNR--HDLVACTQQTWTALVEFAQYFDMTMILAGQEHLRKAEVQIKNSTQPRLWLEVTLL 357 Query: 355 RAL-----AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE-- 407 L P+ P P V + +P P AV V P + PQ L + Sbjct: 358 GLLPSATTNIQPQAPNIAPRVIPPAVSPSYPPAVTQNHAVSSLPVAEPQTNHNSTLRQGS 417 Query: 408 --TTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA 465 T V A+ Q GA + +K+ +AA P E +A V S Sbjct: 418 VTTNHHVAIAQNQPVTSSGAVEQQKNHNSAANSVSPPTP---EPVAVPVPSAIVEAVTSE 474 Query: 466 LEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHE 504 + W+ +Q K + + + +E + Sbjct: 475 VVGEAQYDLTQVWQQVLANLQPKSRQEMLRQMSQLIEFD 513 >UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBE6_9GAMM Length = 636 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 237/643 (36%), Positives = 337/643 (52%), Gaps = 14/643 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+ F ++VGQ HV AL L RIHHAYLF+GTRGVGKT+IAR+ AK L Sbjct: 2 YQVLARKWRPKNFHELVGQTHVTQALTYALDHNRIHHAYLFTGTRGVGKTTIARIFAKSL 61 Query: 63 NCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ +++ PCG CD+C+EI+QGRF DLIE+DAASR++VE+TR+LLDNV YAP +G++K Sbjct: 62 NCQKNHVSSNPCGECDHCKEIDQGRFPDLIEVDAASRSRVEETRELLDNVPYAPVKGQYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM S SFNALLKTLEEPP HVKF+LATTDPQKLP TILSRCLQFHLK + Sbjct: 122 VYLIDEVHMFSASSFNALLKTLEEPPPHVKFILATTDPQKLPATILSRCLQFHLKNMSER 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 QI L HIL EH +EP AL LLA AA GS+RD+LSL DQA+A G G V T+ V+ +L Sbjct: 182 QISEHLAHILQAEHAEYEPDALHLLANAAAGSMRDSLSLLDQALAYGRGHVRTRDVATLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + + Q L +++ + + + + ++ LL+ +L + +I + QL Sbjct: 242 GAVPEPQLLHMLQLLANGDAPGLRNTLESLDEYAPDYAGLLLRLLQQMQKITIAQLGAER 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 ++ A + +P +QL+YQ + LPY PD RM +EM+LLR +A P Sbjct: 302 YAEEIPAALHALAA---RLPVELLQLWYQIGNEAWQNLPYQPDARMALEMSLLRMIALQP 358 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 +P +P R AP + + Q A P+ + A Sbjct: 359 LLPTSDPAQARP-VREAAPASDSLTASLQAQTTPATATPAATTEPQAVAPSETASHGEAP 417 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 T +EPA + + D P E P ++ R A Sbjct: 418 AAPTTATVHAEPADNE-----PPPWEDTTPAAADDSNDAVPPWVSETIP--DDSERTPAK 470 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER-DPWAAQVSQLSLPKLVEQVA 540 P +A A A + P + I+ + W+ ++ L L + + Sbjct: 471 KPESAPAAAIAPETAAPAAAKKPAAPPANTTDPGDLIDNLERWSDFLASLDLHEYPLLLL 530 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 N+ + L L ++ + AQ + A ++ + TI A++TP+ Sbjct: 531 ENSVPASWQAPL-LSLYTAPTGIIFDQAQNREQAAAAIAHALGIACTIEIQPADALKTPI 589 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E+R+ +A + + I+ + F L ++I+P+ Sbjct: 590 EYRRQKNAAAQQRAEQDFLNHPQIRAAQATFGPALQVDNIQPL 632 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 167/439 (38%), Positives = 245/439 (55%), Gaps = 16/439 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WRPQ DVVGQEH+ L N L ++ HAYLFSG RG GKTS A+++AK Sbjct: 1 MAYQALYRVWRPQVLKDVVGQEHITRTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C I+ G VD+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEQAPVEEPCNTCSTCTGIQDGSIVDVIEIDAASNNGVDEIRDIRDKVKFAPSGASY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + ++E I+ + +A +P AL ++ARA+EG +RDALSL DQAI+ D V+ V ++ Sbjct: 181 HTMIKRMEEIIEDGDLAVDPDALSMIARASEGGMRDALSLLDQAISYADTSVTLDDVLSI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D ++EA+++ + I+ + G + + + + L + MVQ +PA Sbjct: 241 IGAASQDLMYDVMEALLDQQVADGLTAIDRLMSDGKDPGRFMEDFIFLTRDLLMVQAAPA 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + D + R LA + + + L ++++ +A + +EM +++A Sbjct: 301 LDESGDRKLGDQRFEILASKASQSWLFALMEKLNHFQQQMKWASHPAVFLEMFVVQACQM 360 Query: 360 HPRMPLPE--PEVPRQSFAP-----------VAPTAVMTPTQVPPQPQSAPQ-QAPTVPL 405 R P PE RQ + + P P QP S Q QAP Sbjct: 361 PSREPEKAGLPEEVRQQISTLEHKLADLERRLQQAPSQAPAGRPDQPASPSQPQAPVRKQ 420 Query: 406 PETTSQVLAARQQLQRVQG 424 P+ S A+R +QRV+G Sbjct: 421 PQAAS-TGASRANMQRVKG 438 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 187/730 (25%), Positives = 306/730 (41%), Gaps = 94/730 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV ARK+RP TF DV+GQ+HV+ L N + R+ HAYLF G RG GKTS AR+ AK Sbjct: 1 MSYQVFARKYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G D C EI +GR +D++EID AS ++ RDL DNV++AP+RG F Sbjct: 61 ALNCSGGPKVDFDPHEDICEEIAEGRSLDVLEIDGASNRGIDHIRDLRDNVRFAPSRGNF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++ IDEVHML++ SFNALLKTLEEPP HVKF+ ATT+P K+ TILSRC +F L+ + Sbjct: 121 RIVYIDEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HI + E ++ A +A+ A+G +RDA S+ DQ ++ + Q V + Sbjct: 181 EIIAEHLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + ++ ++ L++E A G + L E++ + I + ++ P Sbjct: 241 FGITSRETVAHALALILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPE 300 Query: 301 ALGNDMA-AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA- 358 A + + + + + EL + I + L ++ ++ ++R+ +EM L++A+ Sbjct: 301 ASFDSLPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWSTNKRLHLEMGLIKAVHT 360 Query: 359 -----------------FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 P ++ Q ++ PT P Q +P A Sbjct: 361 LAEASISDIIMALEGAPLATAAPASSSDLASQQEPSTFISSATAPTPAPRQNIQSPVAAT 420 Query: 402 TV----------PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA 451 P+P+ + A+ +Q++Q P + Sbjct: 421 NPTPATEEHLMDPIPDFSLSSPASSPAVQKIQSTDAQASPHPTQEAEPQQETLTPAAPPT 480 Query: 452 SVTD------------RVQARPVPSALEKAPAKKEAY--RWKATTPVMQQKEVV------ 491 S+ R + P + + P + ++ +P + Sbjct: 481 SLAVAEEEFPYSATKLRTKTVPASEEITRHPDSDASDVSKFPTDSPEPTFMDPEENLPLE 540 Query: 492 -------------ATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE- 537 + + +A ++ P + ++ + I + W + Q+S ++ Sbjct: 541 RRTNSFFDNLFDTPSTSSQTQAPVEKEEPAVLSQQSGRTITEEDWKTVLEQMSAKFPLQA 600 Query: 538 QVALNAWKEESDN---AVCLHLRSSQR--HLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 N+ D A+ H Q L + L ALS G++V ++I +D Sbjct: 601 DFLANSVFSGYDGVAVAISFHPSDRQGMDSLGTGPLRTALEAALSQYIGTSVTISIRQDF 660 Query: 593 N------------------------PAVRTPLEWRQAIYEE--KLAQARESIIADNNIQT 626 + P TP + +E K S D I Sbjct: 661 SIPEPVQEELAPLPAPPPSASTIPAPKPHTPQKKTAEPVQEASKEENEDNSYYTDPLIDA 720 Query: 627 LRRFFDAELD 636 F A + Sbjct: 721 AMEIFRARII 730 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 151/349 (43%), Positives = 214/349 (61%), Gaps = 2/349 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY V+ARKWRPQTF +VVGQ HV L N + RI H+YLF+G RGVGKTSIAR+LAK Sbjct: 1 MSYLVIARKWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T TPC VC NC EI QG VD++EID AS ++ R+L + V+Y PA+ R+ Sbjct: 61 ALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAKSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPEHV F+ ATT+P K+P TILSRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L HI +E +A L +AR A+GS+RDA SL +Q ++ +S + V + Sbjct: 181 HMLVDHLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG +D A++E + + ++ + RG++ ++ + +V Sbjct: 241 LGVIDRRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEG 300 Query: 300 AALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRM 347 + D+ + E + + E A P + LY+QT+L +E+ + R+ Sbjct: 301 DSRRLDLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEIRRSTIPRI 349 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 183/425 (43%), Positives = 261/425 (61%), Gaps = 12/425 (2%) Query: 1 MS--YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLL 58 MS YQVLARK+RP +F +VGQ H L N L +HH +LF+GTRGVGKT+IAR+L Sbjct: 1 MSEHYQVLARKYRPHSFVKLVGQTHTKKTLINALDANNLHHGFLFTGTRGVGKTTIARIL 60 Query: 59 AKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 AK +NCE GI++ PC C C EI++G+ +DLIE+DAAS T V++ RD+L+N QY P++ Sbjct: 61 AKSINCEQGISSKPCDKCATCVEIDKGQSIDLIELDAASHTGVDNMRDILENAQYMPSKN 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+K+YLIDEVHMLS++SFNALLKTLEEPPEHVKFLL TTDPQKLPVT+LSRCLQF L+ L Sbjct: 121 RYKIYLIDEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQL 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++I QL+ I+N E +++E AL +A GS+RDALSL DQ+I+ G G V+ + Sbjct: 181 THDEILEQLKFIMNAEVLSYEESALGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIK 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 AMLG + D + L + + + V+ I + + RG L ++ L H+I++ Q+ Sbjct: 241 AMLGLVHHDDIIKLTTHLFSQDAKAVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIV 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 ++ L+ I D+Q++YQ + G K++ AP ++G EMTLLR LA Sbjct: 301 -------NTESNKTIQNLSTQISNFDLQIFYQMSINGSKDMALAPSEQIGFEMTLLRMLA 353 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 F +P ++ + + P + QP+ + T P + Sbjct: 354 FRSDT---QPNTEKKMIEIKSEVKISAPIEEKLQPKVEEKPGITKPTILDINNQQQWETL 410 Query: 419 LQRVQ 423 +Q ++ Sbjct: 411 IQTLE 415 Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 69/161 (42%), Gaps = 3/161 (1%) Query: 484 VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA 543 ++ + ++ P K + E+ P + + + W + L + + N Sbjct: 368 EIKSEVKISAPIEEKLQPKVEEKPGITKPTILDINNQQQWETLIQTLEFKNGAQILVKNT 427 Query: 544 WKEESDNA-VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW 602 + ++NA + L L + +L + Q+ + L K ST+ L I P +T + Sbjct: 428 LFDNTNNATLTLTLDNQFANLLSDQVQKSMLTTLRQ-KNSTLNLVINLG-KPNAQTLAQK 485 Query: 603 RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + + EK+A+ + + D +Q L + FD +++ SI+ I Sbjct: 486 QTQAHNEKMAKIQTQFLNDKGVQKLEKIFDTKININSIKKI 526 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 180/541 (33%), Positives = 282/541 (52%), Gaps = 10/541 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y +ARKWRPQ+F+D+VGQEH+ L N + GR+HHA+LF+GTRGVGKT+ AR+LA+ Sbjct: 1 MAYIAMARKWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG CD+C++I G +D+ EIDAAS T V++ RD+++ VQY P G++ Sbjct: 61 TLNCKGSDPLHPCGECDSCKDIAGGNPMDVYEIDAASNTSVDNIRDVIERVQYPPVIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS +FNALLKTLEEPP HV F+ ATT+ K+P TILSR +F K L V Sbjct: 121 KIFIIDEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQRFDFKRLTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QIR +L +I +E I AL + A A+GS+RD L+ DQA A +++ ++V ++ Sbjct: 181 DQIRSRLRYICEQEGIKATDEALDIFAEKADGSMRDGLTYFDQAYAFTGNEMTAESVRSV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 LG + SL++++ + + ++++A GIE+ LL L + +L Sbjct: 241 LGIPPVELFFSLIQSIENHDIKGCFRMVDDAVKIGIEFIPLLDGFGKFLRNLLYARLDAF 300 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +P AL N + + + A+++ DI + L+ + L Y+ + R+ VE T R Sbjct: 301 TPDAL-NITEELYTKYKSCAQSLTNGDILRISKMLIDLQGTLRYSTNPRLLVETTFARMA 359 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTP-TQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + L + AV T+V + + + P + Sbjct: 360 WLDRLVDLRKALAAINDPKSAENDAVKKKVTEVSAMIDAQEEVQASYDDPFAGYDQGGVQ 419 Query: 417 Q-QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + A + S A V +AA+ T + P P AL A + + A Sbjct: 420 AFSRYEISAAWPSILSNIANDGDY--VFSAAIAGTTLETGDPEQNPFPIALTYAGSTENA 477 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS--QLSLP 533 W + V + L+ L+ + + + E+ + AA++S +L L Sbjct: 478 ENWGYRQMTEHPEYVERVTRILEDRLQTKIALSIRTRAFTESELAEQRAAKMSPYELDLE 537 Query: 534 K 534 K Sbjct: 538 K 538 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 135/356 (37%), Positives = 212/356 (59%), Gaps = 1/356 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F +VVGQEH+ L N +S RI HAYLFSG RG GKT++AR+LAK Sbjct: 1 MAYLVLARKFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G T PCGVC+NC EI + VD++EID AS ++D R L +NV+++ A ++ Sbjct: 61 ALNCKNGPTIKPCGVCENCVEISKSSSVDVLEIDGASNNGIDDIRVLRENVKFSTASSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDE H ++ +FNALLKTLEEPP HV F++ATT+ K+P+TILSRC ++ K + Sbjct: 121 KIYIIDEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ ++ I EE + AL ++ A+ GS+RDALSL DQA++S G+++ + + Sbjct: 181 AEMVCAIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D +S+ + + + + ++ ++ E +G ++ L + + ++P Sbjct: 241 LGLLPKDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINP- 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 A+ + + + L +E+ + R+ +EM LL+ Sbjct: 300 AIAEISSEDKKIFDVQKSLFTVSRYVRMNNLLSKALEEMRWHDQPRILLEMYLLKM 355 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 160/501 (31%), Positives = 263/501 (52%), Gaps = 14/501 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R +RP+ F DV GQ+ ++ L N L +I HAY+FSG RG GKTS+A+++AK Sbjct: 1 MSYVALYRTYRPKFFKDVFGQKVIVQTLQNALLNEKIGHAYIFSGPRGTGKTSVAKIVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG CD C +++G D+IEIDAAS V++ RDL D V+YAP+ G++ Sbjct: 61 ALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASNNGVDEIRDLRDKVKYAPSIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP++V F+LATT+P K+P TILSRC +F K +++ Sbjct: 121 KVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTEPHKVPATILSRCQRFDFKNIEM 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L+ I+N+E++ P AL +AR AEG +RDALSL DQ ++ + +++ + + + Sbjct: 181 DQIEENLKQIINKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFTNDEITEEDIYTV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G L L++ + ++ + L+N+ G + ++ +++ L + + ++ P Sbjct: 241 SGGLSRRYINELLKVIYLKQPQKALDLLNQIIKDGKDIARMVSDIILALRDVLLDKIRPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 D+ + I P I Y L ++EL + +R +E+ L++ + Sbjct: 301 KKYPDL-----------KDIKPNLIYAYLDILNDLQQELKFTTSKRAYLELALIKMINHE 349 Query: 361 P-RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 M E ++ V ++ QV + P Q P ++ ++ Sbjct: 350 SIEMVSLEDKITHLESDIVKLKELVNKAQVSQEAVKTPVQNIPASRPTNLKALVTVKEIE 409 Query: 420 QRVQGATKAKKSEPAAA-TRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + A + K+S + +N +L+ +A + V + + Y Sbjct: 410 DILNHADRQKRSLLNRGWPVLKDYDNPSLKPVAELLSEGTLEAVGNEDVMLLVYDDLYTA 469 Query: 479 KAT-TPVMQQKEVVATPKALK 498 K P ++QK + + K Sbjct: 470 KTMLNPEIKQKVLEILNQKQK 490 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 164/462 (35%), Positives = 237/462 (51%), Gaps = 11/462 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++ L R++RPQ F +VVGQEH+ L N + GR+HHAYL SG RG GKT++AR+LAK Sbjct: 1 MAHLALYREYRPQRFGEVVGQEHITRTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G +DLIEIDAAS +++ RDL D V +AP ++ Sbjct: 61 AVNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVELKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ QKLP+TILSRC F + L Sbjct: 121 KVYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 ++I +L + ++ + P AL +AR A+G +RDALSL DQ +A +G+++ A Sbjct: 181 DEIVARLREVCGKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT DQ L+L ++ + + ++E G + L+ + L L + +V+L Sbjct: 241 VLGTAPLDQFLALDGHLLRGDVGAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEA 300 Query: 300 AALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + A +MR A + + L EL +P R+ VE+ L+R Sbjct: 301 GAQVLGLPAEALEQMRARAEPFAERQLIRAIRLLGQAETELRLSPSPRLLVEVALIRLTG 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 E E + AP+ +PQ A Q T+ A Sbjct: 361 LFTGAAADEGEDDGTAAEAAAPSRRRRQEHGEVRPQGASQA---------TAPGPAGPGD 411 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQAR 460 G S PA A E++ + + + Sbjct: 412 PGEPAGGQATTPSAPAPVGAGVDRVVEAWEQVLGLVRKARTS 453 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 147/441 (33%), Positives = 232/441 (52%), Gaps = 12/441 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RP +F +VVGQ+H++T L N + +I HAYLF G RG GKT+IA+LLAK Sbjct: 1 MSYKALYRTYRPSSFEEVVGQQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE A PC C +C I+QG D++EIDAAS V++ R+L++ V+YAP GR+ Sbjct: 61 AVNCEDQQNA-PCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEGRY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+PQK+ TI+SRC ++ + Sbjct: 120 KVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQ 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ +L +EHI E AL+L+A+ A+G +RDALS+ DQ IA ++ V+ + Sbjct: 180 NEIITRVRCVLEQEHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQNHITAAHVNEI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + +++ + + + ++ I +G++ + L +++ +L + + Sbjct: 240 YGITTVSEKIEMLQWIFQHQAQSLLEKIRLLNEKGVDIKRLTSDLIEILKECVIF-IYTQ 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + E + D+ L+ ++ A E+ +L+ +A Sbjct: 299 DVTLLNKINETEANAIINGKSSRDLLALIDILMETLEKYRTASSAASYFEVAVLKMMA-- 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + A V P P P P S PQ + P PE S+ ++ Sbjct: 357 -------ELDQSRRTAAVIPPVYSQPATAPSIPAS-PQASTGKPRPEVQSESTLMPEEAD 408 Query: 421 RVQGATKAKKSEPAAATRARP 441 + + P A Sbjct: 409 LTEDTLPLEMMPPLPAPPEET 429 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 236/424 (55%), Gaps = 12/424 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP TF DV GQ+H++T L N + RI HAYLF GTRG GKT++A++LAK Sbjct: 1 MSYMALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC C C+ I+ +++IEIDAAS V++ R++++ V+Y+P G + Sbjct: 61 TVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 ++I +L I +E I E +AL+ +ARAA+GS RDALSL DQ IA GQ ++ V Sbjct: 181 DEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LGT+D + L+ + + + +A++ E +G E ++ L + + + S Sbjct: 241 ALGTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTSE 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + +++ A++ + + + ++ YA +R+ +E+ L++ Sbjct: 301 DMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQKRVMIEVALVKLC 360 Query: 358 AFHPRMPLP-------EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 P M + + V T+ P + A + + V LP+ S Sbjct: 361 --KPAMETDYASLIHRIQVLENRLEEGVFVTSKDEIEGAVPVVEKAKKASVPVELPKAVS 418 Query: 411 QVLA 414 L Sbjct: 419 ADLQ 422 >UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thiomonas intermedia K12 RepID=C7I1D0_THIIN Length = 612 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 241/650 (37%), Positives = 339/650 (52%), Gaps = 54/650 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ LARKWRP++FA +VGQ+HV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MTSVALARKWRPKSFASLVGQDHVVRALTHALDHDRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC + G+T+ PCGVC C EI+ GRFVD IE+DAAS VED LL+ Y P Sbjct: 61 ALNCTGPDGQGGVTSQPCGVCPACTEIDAGRFVDYIELDAASNRGVEDMTTLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHMLS H+FNA+LKTLEEPP++VKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLSNHAFNAMLKTLEEPPDYVKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+ +L E++ + AL+L+ARAA GS+RDALSLTDQA+A G+V T+ Sbjct: 181 KQMMPGAIVGHLQQVLQAENVPADDAALRLIARAAHGSMRDALSLTDQALAYCAGRVETE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLGT+D L +++A+ +G ++ + ARG+ + A L E+ LL IA++ Sbjct: 241 AVQQMLGTVDRSDLLLILQALASQDGVALIHQADALEARGLSFGAALEELAALLQTIALL 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 QL P A D E + LA + P +QL Y T+L GR EL APD R G MTLLR Sbjct: 301 QLVPQAADADDPQHEA-LVALAAQLSPELVQLAYTTVLHGRNELSLAPDDRTGFTMTLLR 359 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 LAF P + P +P A LP+ + Sbjct: 360 LLAFAPVIAGSVPSLPPGGLA----------------------------LPKAAAPASPP 391 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 Q A + + + +AT + A A+++ + A E+APA A Sbjct: 392 SQSAAAQVAAQREQPATK-SATPVQTAAKAMPRTAATLSAPLAPAAPVLAAEEAPATSYA 450 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP-K 534 + + T A +K L+ + W V +L +P Sbjct: 451 AKPEPQTQPQPTPPRPA---DIKPPLQ----------ITPHIASDTDWPTLVQRLDVPAG 497 Query: 535 LVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 L +A + L + + Q L G+ KL A+ + G + L + Sbjct: 498 LPRALAQQSELVAMQGMDWLLRVPNEQ--LTRAGSLDKLQTAVRLALGQDIVLRAEAGEV 555 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 ++ + A A +I D +Q L A++ S++P+ Sbjct: 556 TDSV--MQRDARAKAQAQADAEAAIRNDPLVQQLMHDLGAQIVPGSLKPM 603 >UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 Length = 553 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 144/359 (40%), Positives = 228/359 (63%), Gaps = 2/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R+WRP+ F+DVVGQ H+ L N + R+ HAYLF GTRG GKTS+A++LAK Sbjct: 1 MSYTTLYREWRPKNFSDVVGQNHITVTLKNQILNNRVAHAYLFCGTRGTGKTSMAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C++I QG +D+IE+D AS+ K+ED +D+++NV+Y P G++ Sbjct: 61 AVNCLDIQQGEPCNECEMCKKINQGISMDVIEMDTASKRKLEDIKDVIENVKYPPQEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML++ + NA LKTLEEPP +V F+LATTDPQKLPVTILSRC +F + + Sbjct: 121 KVYIMDEVHMLTQEAVNAFLKTLEEPPLNVIFILATTDPQKLPVTILSRCQKFDFRRIKS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++L I+NEE I + R+L L++R +G++RDALS+ DQAI+ G G+V ++ M Sbjct: 181 SEIFNRLRAIVNEEGIFADDRSLNLISRICDGAMRDALSVLDQAISMGSGKVEYNSIVDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG + ++ L ++++E N E M +I++ G + + EM+ L + MV++S Sbjct: 241 LGLVTNENLFHLTDSIIEKNVELSMKVIDDIVLSGKDIYNFIKEMIVHLRNLLMVKVSNN 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 P + + +++ A+ I +I + ++ + R+ +E+ +++ Sbjct: 301 PEEILDISEENIELLKKQAQKIRVEEIMRHINIFQDAEEQSKWVKQSRIYLELAVIKMC 359 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 162/617 (26%), Positives = 272/617 (44%), Gaps = 33/617 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RK+RPQTF DVVGQ V L + ++ HAYLF+G RG GKTS+A++ A+ Sbjct: 1 MAYIALYRKYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G T PC C CR I G+ +D++EIDAAS +++ R L ++V++ P GR Sbjct: 61 AINCEHGPTDHPCNECSACRSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGRK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ ++NALLKT+EEPP HV F+ ATT+ +KLPVTI+SRC ++ + + Sbjct: 121 KVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +L ++ +E + A QL+A A+G LRDALS+ DQ G ++ Q V + Sbjct: 181 DDIAQRLSYVAEKEGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMATGSITPQVVEEL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + + ++A+ +G +V++ +++A A G + ++ ++ + + + +++P Sbjct: 241 IGLVSKEWIIHFLDALRNGDGPKVLSYVHDALAEGRDATQIMEALIQHVRALLVGKVAPD 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL----- 354 A A + A ++ ++ Y ++ + + R +EM LL Sbjct: 301 ADELKVYDAFKDEFLAQANSVDFNELNQYVRSAQSIMNDAKQVDNPRTIIEMGLLVLCAK 360 Query: 355 ----------RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 R A ++ + V PT PQ Sbjct: 361 LGSVDESLEDRVYALESAERSERNDLLNRMAQLEQRGPVAAPTMYGANAFVPPQGGYANS 420 Query: 405 LPETTSQVLAARQQLQRVQGAT-KAKKSEPAAATRARPVNNAALERLASVTDRVQARPVP 463 + V + Q T A P+N + + P Sbjct: 421 FVSVDTTVTTQDAPMSSTQNTTIDAVPPSSGMGMTPPPMNGVGMTP-PPMGAPGSTPPPM 479 Query: 464 SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPW 523 + + AP P + + +A K + +E I Sbjct: 480 NGVGMAPPPMGGV---GMAPPPNNGDTDSRKPTRNQAKGRAKKGVSTQAIISEQILSAQE 536 Query: 524 AAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQR--------HLN---NRGAQQKL 572 V Q ++ K ++ N +++ S+ HLN N + Sbjct: 537 YRNV-QSNVIKYLKDSNRNMTSTVIGQGQLVYVDQSKAVMAFKNTLHLNVMTNEVNLAEA 595 Query: 573 AEALSMLKGSTVELTIV 589 A+A + G V + IV Sbjct: 596 ADAFTYTLGYAVHVEIV 612 >UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 Tax=Acidithiobacillus RepID=B5EJD9_ACIF5 Length = 572 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 234/477 (49%), Positives = 295/477 (61%), Gaps = 7/477 (1%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS Y LAR+WRPQ F D VGQE V++AL + L GRIHHA+LF+GTRGVGKT++ARLLA Sbjct: 1 MSAYLALARRWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 K LNCE G+++ PCG C CR I G FVDL+E+DAASRT+V++TRDLLDNVQYAP GR Sbjct: 61 KCLNCERGVSSNPCGECSACRSIAAGNFVDLLEVDAASRTRVDETRDLLDNVQYAPTAGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+T+LSRCLQF+L+ LD Sbjct: 121 YKAYLIDEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLD 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V QI+ +L I++ E + E ALQ+L+RAA+GSLRDALSL DQAI G G V V A Sbjct: 181 VPQIQGRLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG DD L L+ A+V+ + +V A++ + ARG++ LL ++ LHRIA+ Q P Sbjct: 241 MLGRSGDDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A +D A + +R I P +Q +Y LL R++ PD RM +EM LR L+F Sbjct: 301 ADPDDDGAEAVVHLR---GRISPLTLQSWYFLLLSARRDFALYPDDRMALEMAFLRVLSF 357 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA-PQQAPTVPLPETTSQVLAARQQ 418 P P + PT+ P++ P +VPL S+ Sbjct: 358 SGSASPDSPPAALPGGENRHPGESLPPTREFVMPEATSPLSDHSVPLLSIRSRDEVREPS 417 Query: 419 LQRVQGATKA-KKSEPAAATRARPVNNAALERLASVTDRVQA-RPVPSALEKAPAKK 473 G A + PAA R + A +A QA R P A+E A Sbjct: 418 PVATSGQRDADAGTAPAADWRRVLASLAVSPMIAEYLRYGQALRCDPEAVELAVEPN 474 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 11/198 (5%) Query: 452 SVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALK---KALEHEKTPE 508 S + +P + P + + P + L + E +P Sbjct: 360 SASPDSPPAALPGGENRHPGESLPPTREFVMPEATSPLSDHSVPLLSIRSRDEVREPSPV 419 Query: 509 LAA---KLAAEAIERDPWAAQVSQLSLPKLVEQ-VALNAWKEESDNAVCLHLRSSQ-RHL 563 + A W ++ L++ ++ + + AV L + + L Sbjct: 420 ATSGQRDADAGTAPAADWRRVLASLAVSPMIAEYLRYGQALRCDPEAVELAVEPNYLPFL 479 Query: 564 NNRGAQQKLAEALSMLKGSTVELTIV-EDDNPAVRTPLEWRQAIYEEKLAQARESIIADN 622 A++ L +AL+ G L+IV V + ++ +A + A A + AD Sbjct: 480 LKTEARRALHQALTAYYGREPRLSIVALTIETGVGSLVQEDRAQLASRQAAAEARVAADP 539 Query: 623 NIQTLRRFFDAELDEESI 640 I DA + ESI Sbjct: 540 RIGAFLEALDARV--ESI 555 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 156/462 (33%), Positives = 233/462 (50%), Gaps = 4/462 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRPQ+F ++VGQEHV L N ++ RI HAYLF G RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C NCR I G D++EIDAAS V++ R+L + V+YAP G + Sbjct: 61 ALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP +V F+LATT+ K+P TILSRC +F + L V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +LE I IA L +AR AEG +RDAL + DQ ++ ++ + V+A+ Sbjct: 181 NEIVDRLERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D+ + + + E V+ +N+ RG E L ++LG +++ P Sbjct: 241 LGAVADEILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPG 300 Query: 301 A--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A L + I +++E +D+Q L ++ + R+ +E+ +R Sbjct: 301 AADLVDMPDDIAAKVKETGHVYSVSDLQACIALLSQAENDMKWTTHPRILLEVAFVRIAC 360 Query: 359 FH-PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + P P A A M + + A + + + R Sbjct: 361 REWGKGAGNAPASPTSGGAGGAADMEMRALRRRVESLEAKVREMQQAVENQGAASGEKRP 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 L + + + + P+A A RLA + Sbjct: 421 SLDS-EALRRPQPAMPSATISKLDEETKAAARLAEGPIHIDQ 461 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 163/591 (27%), Positives = 282/591 (47%), Gaps = 25/591 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ F D+VGQE V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MSYQALYRVWRPQRFMDLVGQEMVTKTLKNAIITHQTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I +GR D+IEIDAAS VE+ RD+ D V+YAP + Sbjct: 61 AINCRFSKEGEPCNECETCKAITEGRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTEADY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TI+SR +F K + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPATIISRTQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I ++ +IL+++++ ++ +AL+++A+AAEG +RDALSL DQ I+ GD V+ + Sbjct: 181 ESILQRMIYILDQKNVDYDDKALKVIAKAAEGGMRDALSLLDQVISFGDNNVTLDNALLV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++ + + ++ ++ + + I + +G + L+ +++ + + Q +P Sbjct: 241 TGSVTQESLFNYLKFVLSKDTTNALKEIQQIVEQGKDANRLIEDLINYCRDLLLYQQAPE 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + ++ ++ + +EL++ I T + L ++ + ++ + + +E+ ++ Sbjct: 301 MVSDGELGLLDDKFKELSQQINVTQLYQIIDELNKQQENMRFSSHQSIYLEVLTVKLTQL 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 E R S ++ ++ Q + + TV + R+ Sbjct: 361 ST-----NSEADRVSNVDLSQIELLKQKIENLQRKVDNLSSNTVQTEKNNEPRKQVRKNT 415 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + Q K S+ + + + A+ Sbjct: 416 TKGQKNVKINLSQVYSVLNNATRQSLNELKQVWPDLMNMLSVTQRAIMHV---------- 465 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE-- 537 + PV + V + A +K E + D +V L L + Sbjct: 466 -SEPVAASENGVVV--GFEYAFLCQKALEDQELIDTLENGLDRLIGKVPSLVLIPVENWP 522 Query: 538 QVALNAWKEESDNAVCLHLRSSQRHLNNR----GAQQKLAEALSMLKGSTV 584 ++ N K+ + AV + +S++ +N Q + + L G+ + Sbjct: 523 EIRSNYLKQRKNGAVVIADDTSEQSQDNDDQSASTQPTIIQKAEELFGTDI 573 >UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSN6_CHIPD Length = 634 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 165/648 (25%), Positives = 286/648 (44%), Gaps = 30/648 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RPQ F+ VVGQ H+ T L N + ++ HA+LF G RGVGKT+ AR+LAK Sbjct: 3 NFIVSARKYRPQNFSTVVGQSHITTTLKNAIRNSQLAHAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE C C +C +G ++ E+DAAS V+D R L++ V++AP G++ Sbjct: 63 INCENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNA LKTLEEPP + F+LATT+ K+ TILSRC F K + + Sbjct: 123 KIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRITI 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+ I ++EHI E AL L+A+ +G +RD+LS D+ ++ G ++ Q Sbjct: 183 QDTVDHLQEICSKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSFTGGHLTYQNTLEH 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD D +++ +++ + + + +E +G E + L L + M + Sbjct: 243 LNILDYDYFFRVMDTVLQQDVATALLIFDEILQKGFEGDNFLNGWAEFLRNLLMSKEEKV 302 Query: 301 A-LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L ++ R +++A + P+ + L A ++R+ VEM L++ Sbjct: 303 LHLVEVSGNLKDRYKQMAGKVSPSYLITALHLLNETEINYRMARNKRLHVEMALIKLCFL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ-PQSAPQQAPTVPLPETTSQVLAARQQ 418 + L + + P ++ Q+AP+ P TT+ + A + Sbjct: 363 QQAVTLVSDDQTGEVVKKKLVADGAQPQKLRSSFAQAAPEAKPAAGQAATTTSIAANEAR 422 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 L P T P + V P + + Sbjct: 423 L---------TIETPVNNTGVPPQTVTQPAQPVQQQPPVSQAPANTQHTSSYNTTTTATA 473 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLA-----AEAIERDPWAAQVSQLSLP 533 + A+K+AL ++ + A + A ++ D + + Q + Sbjct: 474 PKPAQAPTNAPKLTGLAAMKEALASKQQTQPAKAVIPMTAGALSVYWDEFIDRFRQANKM 533 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGST-VELTIVEDD 592 +V + L K +S +C+ R+ + + ++ + + LT+ D+ Sbjct: 534 TVVSNLQLATIKLQSAEEICIVSRNIVQFRFMEEEKLAISAFFKDKFQNPGIVLTLQLDE 593 Query: 593 NPAVRT----PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + + PL R+ + ++ L+ + ELD Sbjct: 594 SQQTQDIGPAPLSSREQFLKMTEKY--------PLVKELKEKLNMELD 633 >UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, putative n=2 Tax=Rhodothermaceae RepID=Q2RZH6_SALRD Length = 728 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 158/525 (30%), Positives = 235/525 (44%), Gaps = 30/525 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V ARK+RP F +VV QEHV L N + + R+ HAYLFSG RGVGKT+ AR+LAK + Sbjct: 6 YLVTARKYRPSLFTEVVAQEHVTETLKNAIRMERLAHAYLFSGPRGVGKTTAARILAKAI 65 Query: 63 NCETG-----ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NCET A PC CD+C E GR +++ E+DAAS KV+D R+L + V+ P Sbjct: 66 NCETPREEREDGAEPCCECDSCESFEAGRSLNVFEMDAASNNKVDDIRELREKVRIPPQG 125 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 + KVY++DEVHMLS+ +FNALLKTLEEPP H F+ ATT+P K+ TILSRC +F + Sbjct: 126 DQKKVYILDEVHMLSKQAFNALLKTLEEPPAHALFIFATTEPHKVLPTILSRCQRFDFRR 185 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + V +I +L I E + + +L LLAR G+LRDALS DQA++ + + Sbjct: 186 IPVPEIVQRLREICETEGVEADEESLMLLARKGNGALRDALSAFDQALSLCGATLEYGEL 245 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-Q 296 + LG +D D L + + + ++ L+ G + + +LV + L + + Sbjct: 246 TQALGVVDQDLYFRLTDHVAAQDTAGMIELVRHVVRSGYDLQEMLVGLAEHLRNLLVAHS 305 Query: 297 LSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 L AL + R + A D+ ++ +P R+ +E TLL+ Sbjct: 306 LGGEALEEVAESTRTRYADEAERFDEADLLRLLTMAADTEDDIKQSPQPRLTLETTLLKM 365 Query: 357 LAFHPRMPLP---------EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL-- 405 L E P +T ++ P + P+ + Sbjct: 366 AQLRRSADLRAVLEKIDRLEQMAEDGDLPEAVPGDGVTASETASAPPAPPESEKSENTET 425 Query: 406 -----PETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRV--- 457 E + A + + E A +T+ + + D V Sbjct: 426 GGAAGREASPDAAAEPRPGYGPESTAPPNAPEDAPSTKDAESDPKNETPDGAPADVVDEA 485 Query: 458 -----QARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL 497 A A EA +A Q + P + Sbjct: 486 GNETLSASDEDDAPNDDAPNDEAPNDEAPDADAQGPDDGDEPPSS 530 >UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 Tax=Legionella RepID=Q5X1E1_LEGPA Length = 556 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 214/431 (49%), Positives = 278/431 (64%), Gaps = 7/431 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+TF+ +VGQEH+ AL N L+ R+HHAYLF+GTRGVGKTS+AR+LAK Sbjct: 1 MSYLALARKWRPRTFSQLVGQEHINKALINALNQQRLHHAYLFTGTRGVGKTSVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC CD C IEQGR++DLIEID AS+T+VEDTRDLLDN+QYAP GRF Sbjct: 61 ALNCEKGITSEPCLHCDTCVAIEQGRYIDLIEIDGASKTRVEDTRDLLDNIQYAPTNGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+HSFNALLKTLEEPP HVKF+LATTDPQKLPVT+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSQHSFNALLKTLEEPPSHVKFILATTDPQKLPVTVLSRCLQFNLKHLPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I QL+ IL EE + E +AL +LA+AA GS+RDALSL DQAI S + ++ V + Sbjct: 181 ELINQQLQLILQEERLDFEIQALDILAQAARGSMRDALSLLDQAITSCETKLLASDVKIL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D AL L++A+ + ++ L + A G ++ +L EML LH+I + Q Sbjct: 241 LGHTQQDYALLLLQALAKQEAPTMLVLSQQIIAEGGNFQYVLDEMLNYLHQITIYQCLGD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 N + + + ++ELA+ D QL+YQ + GR+E+ AP +G MT+LR F Sbjct: 301 --NNPLISPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYTFK 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + P + + + T P P +P+ + T ++A Q Sbjct: 359 PASHVTTPPLAFEQNNKTCSLIIDDNT-----PAQNPIGIEPIPVTKATGNIVAYHQTQS 413 Query: 421 RVQGATKAKKS 431 K+ S Sbjct: 414 LSTDDKKSANS 424 Score = 94.6 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 84/248 (33%), Gaps = 5/248 (2%) Query: 397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDR 456 P +P + E Q A QL G ++ A Sbjct: 303 PLISPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYTFKPASH 362 Query: 457 VQARPVP-SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 V P+ K + A P+ + V A ++ K +A Sbjct: 363 VTTPPLAFEQNNKTCSLIIDDNTPAQNPIGIEPIPVTKATGNIVAYHQTQSLSTDDKKSA 422 Query: 516 EAIERD--PWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKL 572 + E W + QL L L NA + + + + L ++ + L ++ Sbjct: 423 NSGESMNCDWNDIIPQLKLSGLALNAIENAEFLGKKEREITLGVQKGHQSLFTPTTINRI 482 Query: 573 AEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 AL+ S V++T+ D P + ++ +EK QA ++ AD Q L++ F Sbjct: 483 ETALAGYYKSPVKITLNSQDAVHAS-PAQQKEKATQEKQEQAEAALHADPVFQQLKQEFS 541 Query: 633 AELDEESI 640 AEL + SI Sbjct: 542 AELVKNSI 549 >UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 Tax=Chlorobiaceae RepID=B4S8V3_PROA2 Length = 617 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 181/656 (27%), Positives = 295/656 (44%), Gaps = 60/656 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV+ARK+RP FAD+ QEH+ + N L L R+ H Y+FSG RGVGKT+ AR+ AK Sbjct: 1 MSYQVIARKYRPSKFADITAQEHITHTIQNALRLDRVGHGYIFSGLRGVGKTTAARVFAK 60 Query: 61 GLNCETGITA--------TPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 +NC+ I PCG C++C + + G +++ E DAAS V+D R L +NV+ Sbjct: 61 AVNCQKMIDDPVYRQEVTEPCGECESCLDFDAGTSLNISEFDAASNNSVDDIRQLRENVR 120 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P +GR++VY+IDEVHMLS +FNA LKTLEEPP H F+ ATT+ K+P TI SRC + Sbjct: 121 YGPQKGRYRVYIIDEVHMLSTAAFNAFLKTLEEPPSHAIFIFATTELHKIPATISSRCQR 180 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ- 231 F+ K + + +I+ QL+ I E + AL L+AR A+GS+RDA S+ DQ IA G Sbjct: 181 FNFKRIPIGEIQSQLQMICRAETLQISDDALLLIARKAQGSMRDAQSILDQVIAFSVGND 240 Query: 232 ----VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLG 287 ++ Q V+ +L +DDDQ + +A+ E + +++ + G + + L +++ Sbjct: 241 AEKVIAYQGVAELLNYIDDDQFFDVSDAVAENDPVKMLQVARFVIDNGYDEQDFLEKLIE 300 Query: 288 LLHR-IAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR 346 + + L L +++ R ++ A + + L+ EL + + + Sbjct: 301 HFRNFLVLYNLRSTRLIERTESVKERYQQSAGGLSAPLVMQLIDLLMKESGELKFQFEYQ 360 Query: 347 MGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP 406 E+TLLR + E+ A PP + AP+ P + P Sbjct: 361 FRFELTLLRLI-----------ELVHNDGGVAASV-----AGGPPVKKKAPE--PDLKQP 402 Query: 407 ETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSAL 466 + + GA A+ PA+ +P + R AS+ Q + Sbjct: 403 D-----RHPGPAGRSAPGARPAELPSPASTPEQQPPS----ARSASLPPSPQQSAPRNVA 453 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 P + W+ + P + + + + R W Sbjct: 454 SGKPGVDFS-AWQGKLMNFTRNGSRKQPVQASSSDARQSG--VFEGVVEVEKFRMEWNQF 510 Query: 527 VSQLSLPKLVEQVALN----AWKEESDNAVCLHL--RSSQRHLNNRGAQQKLAEALSMLK 580 + ++ L K + + + S + + + S L A L++ + Sbjct: 511 L-EMLLKKRQKVLVTHLRSCELTSCSHGVLVMTCGKKFSYEELMQDAAL--LSKEIESFY 567 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 G V+L I D +T Q I+ A ++ ++ + + F EL Sbjct: 568 GIAVKLQICYDAARDAQT---REQTIFTLFRDLA----ETNDVMKYIIKEFGGELV 616 >UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PXF7_9SPHI Length = 596 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 147/494 (29%), Positives = 237/494 (47%), Gaps = 6/494 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQ+H+ L N + ++ A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFIVSARKYRPVTFDSVVGQQHITGTLKNAIHNNQLAQAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE CGVCD+C+ + G + E+DAAS V+D R+L+D V+ P G++ Sbjct: 63 INCEHITSEVEACGVCDSCKSFQNGNSFSIHELDAASNNSVDDIRNLIDQVRIPPQSGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + V Sbjct: 123 KIYIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRIRV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L I +E + ++ L ++A+ A+G LRDALS+ DQ ++ + Q+S Q+V Sbjct: 183 EDMARHLAGIAEKEVVTYDLDGLHIIAQKADGGLRDALSMFDQIVSFSNKQISYQSVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD D L +A+++ + + ++ RG + + + L + + + Sbjct: 243 LNILDYDYYFKLTDAILQEEAAESLLIFDQVLNRGFDGNHFIGGLSSHLRNLLVTKEPAT 302 Query: 301 ALGNDMAA-IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D++ I+ R E ++ + + + ++R+ VE+ LL+ Sbjct: 303 LKLLDVSDNIKKRYLEQSQKVSSGLLLSALNISNQCEINYKTSKNQRLQVELALLKMCHI 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + + V S QP S P P+ TS + A L Sbjct: 363 ATAIQMSQNGVLSGSAEVKKKRPDSAVAAPVSQPVSVPAPV-VTPVSIPTSAEIKAPPSL 421 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + K ++ ++ L ++ + Q + K EAYR Sbjct: 422 AKPVENHPPKLADSGKKGWGAVKVGVSIPNLNTIFEEKQVEESEGP---SLVKGEAYREV 478 Query: 480 ATTPVMQQKEVVAT 493 +Q+ A Sbjct: 479 NLNEFLQKWNEFAE 492 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 136/357 (38%), Positives = 216/357 (60%), Gaps = 3/357 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R +RPQTF DV GQE ++T L + + +I HAYLF G RG GKT++A+LLAK Sbjct: 3 MAYKSLYRTYRPQTFKDVAGQEAIITTLKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLAK 62 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PCG C+NC++IE G D+IEIDAAS VE+ R L+D V+YAP +G++ Sbjct: 63 AVNC--TGNPKPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQGQY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+P K+ TI+SRC +F L Sbjct: 121 KVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTEPHKILPTIISRCQRFDFTRLTD 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +++ +++++L EE ++ +L+L+AR A G +RDALS+ +Q +A D +S + + Sbjct: 181 QEMVQRMQYVLKEEGKTYDDGSLELIARLANGGMRDALSILEQCLAYNDDHLSINDIHTI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + D +L++ ++ N + ++++ GI+ + L +++ +L I + + + Sbjct: 241 YGIVSMDDKTNLLKVLLSKNMSESLKILDKMDKSGIDIKRLTFDLIDILKDIVVYRNTKD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A + + + I + + L+ ++ A D + E+ LLR Sbjct: 301 ASIMS-VMTQKDLENIVPYITSDECFSFIDILMDASEKYIRATDPHIYFELALLRLC 356 >UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsiella grylli RepID=A8PNF7_9COXI Length = 523 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 223/529 (42%), Positives = 314/529 (59%), Gaps = 23/529 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ+F +++GQE L N L RIHHAYLF+GTRGVGKT++ARLLAK Sbjct: 1 MSYQVLARKYRPQSFDELIGQESTCRILKNALRTQRIHHAYLFTGTRGVGKTTLARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+T IT PC C +C+ I RF DLIE+DAASRTKVEDTRDLL +V Y P++GR+ Sbjct: 61 CLNCQTQITPEPCNQCISCQAIHANRFTDLIEVDAASRTKVEDTRDLLADVHYTPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HV FLLATTD Q+LP TILSRCLQFHLK + Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPPHVIFLLATTDTQRLPATILSRCLQFHLKTITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +IL +E I EP AL LA+AA+GSLRDALSL DQAIA + ++ Q ++ + Sbjct: 181 VQISNQLANILKKEKIPFEPEALAPLAQAAQGSLRDALSLLDQAIAYTNQNLTKQDINTL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + + L++A++ + ++ +L+ + + G+++ ++ E+L LH++A+ Q Sbjct: 241 LGHVAHSEIIQLLDALILEDTAKLWSLVEQFSELGVDFSCVMDELLTCLHQMALSQRFKT 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + I+ A+T+ P IQLYYQ +L R+++ AP R+G EM LLR LAF Sbjct: 301 EVNYTQTIID-----FAQTLSPEAIQLYYQIVLFSRRDITLAPTPRLGFEMMLLRLLAFK 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E P+ T TP QP + + T+ LP + L + Sbjct: 356 PAGDDSE-------INPIKLTQTRTPAPEK-QPIATHKTDKTI-LPN-NEKDLHWPTLIA 405 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +++ A ++ N+ +L A+ + A A E ++ Sbjct: 406 QLKLTGLTHALAQQCALQSYHNNHVSLCLDPRQAALRSAKQ---ETKLAHALSEYFKKPI 462 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 T + ++TP L++ + ++ + A EA++ DP + Q Sbjct: 463 TLSIGVGDTSLSTPARLEQQHQSQRL-----EQATEALQNDPTLQAIMQ 506 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 5/150 (3%) Query: 493 TPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESDNA 551 TP K+ + KT + + + W ++QL L L +A + +N Sbjct: 373 TPAPEKQPIATHKTDKTILPNNEKDL---HWPTLIAQLKLTGLTHALAQQCALQSYHNNH 429 Query: 552 VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKL 611 V L L Q L + + KLA ALS + L+I D ++ TP Q ++L Sbjct: 430 VSLCLDPRQAALRSAKQETKLAHALSEYFKKPITLSIGVGDT-SLSTPARLEQQHQSQRL 488 Query: 612 AQARESIIADNNIQTLRRFFDAELDEESIR 641 QA E++ D +Q + + FDA+L +SI+ Sbjct: 489 EQATEALQNDPTLQAIMQTFDAKLQPQSIQ 518 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 165/492 (33%), Positives = 236/492 (47%), Gaps = 13/492 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R WRPQ F +VGQEH+ AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MSYVALYRTWRPQDFDGLVGQEHIRKALTNALESGRISHAYLFTGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PC CD+CREI +G D+IEIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTPHPCNTCDHCREITEGTSADVIEIDAASNRGIDEIRKLREQVHFAPVSSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+P TI SRC +F + + V Sbjct: 121 KVYIIDEVHMITADAFNALLKTLEEPPEHVVFILATTEPQKIPTTIHSRCQRFDFRRVTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L+ + +I EP AL+L+A A+G +RDA+ L DQ + V+ + V + Sbjct: 181 DDIAAHLQKVAEGSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMAN-PVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +LVE + + + L+N+ G + +L E+L + + + Q PA Sbjct: 240 LGIAGRDTMRALVEKIGRRDLPAALDLLNQLMDDGKDVTQVLTELLEYMRALLLYQADPA 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++ + + I + ++ + ++ E+ L Sbjct: 300 YQEIYLTDTAENLKTVEPLFTRSRILAATARIHEASLDVKRSLRSKIVAEICLYDLCRGE 359 Query: 361 PRMPLP----------EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 P + AP A P + + Q A +P P+ S Sbjct: 360 GESPAALMSRIETLEGKVTHLMAGGAPAVSPAFEPPREKRSKTQEAAYASPMATAPDMPS 419 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 V +G E +A +R + A P EK Sbjct: 420 -VTQKEASFPSAEGPAAIPL-EKRQEASFEKQASAVPQRAGQKMEAEGASFTPPFEEKTD 477 Query: 471 AKKEAYRWKATT 482 A ++ Sbjct: 478 APRQPSDLAGAQ 489 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 154/445 (34%), Positives = 238/445 (53%), Gaps = 2/445 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+TF +++GQEH+ L N + GR+ HAY+F G RG GKT+ A++LAK Sbjct: 1 MTYLALYREWRPRTFGEIIGQEHITRTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC A PC C++CR + +G VD+IEIDAAS +++ RDL + +++APA GR+ Sbjct: 61 ALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 +VY+IDEVHML+ +FNALLKTLEEPP H +LATT+P ++P+TILSRC +F + + Sbjct: 121 RVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLTILSRCQRFDFRRIIP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ + + E AL+L+ARAAEG LRDALS+ DQA A G +V+ V + Sbjct: 181 ADIIKRLKEVAAGARLEVEEEALRLIARAAEGGLRDALSILDQAAAFGGMKVTEAGVHQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ D + + R + L++E A G + E+ G L + + ++SP Sbjct: 241 LGTVRTDALDRMAGCLAAGEAGRALRLVSELAGEGKDLRLFARELAGYLRALLLEKISPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + RM A + + + +++ ++ + +E+ L++A Sbjct: 301 TPAGEAWGDTARMAAQAAEFSEAGLVRAVEIIARAEQDMKWSAMPGIVLELALVKAC--R 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P + + ++ P + P + A +A + P + V A L Sbjct: 359 PEAGWDLPSLAARVAGLEEKIKLLAPAEAPVKRPPAAAKAASAPRQAAPAPVPVAVPALP 418 Query: 421 RVQGATKAKKSEPAAATRARPVNNA 445 + Q PA A V A Sbjct: 419 QKQVQEAGGPGGPAEAVSLEQVREA 443 >UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 Tax=Zymomonas mobilis RepID=C8WB95_ZYMMN Length = 628 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 197/649 (30%), Positives = 307/649 (47%), Gaps = 45/649 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RPQ F+D++GQ+ ++ L N ++ R+ HA+L +G RGVGKTS ARL+AK L Sbjct: 11 YRVLARKYRPQKFSDLIGQDAMVRTLGNAIARDRLAHAFLLTGVRGVGKTSTARLIAKAL 70 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC G+T PCG C+ CR I +GR +D++E+DAAS T V+D RD++++V+YA Sbjct: 71 NCVGKDGHGGMTIDPCGECEACRAIAEGRHIDVVEMDAASHTGVDDIRDIVESVRYASVS 130 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 RFKVY+IDEVHMLS+ +FNALLKTLEEPP HVKFL ATT+ K+P+T+LSRC +F L+ Sbjct: 131 ARFKVYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEINKVPITVLSRCQRFDLRR 190 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + + ++ E + E AL ++A+AAEGS+RD LS+ DQAIA G + V Sbjct: 191 ISTATLTDYFSKVVQLEQVEAEEEALAMIAKAAEGSVRDGLSILDQAIAHSSGSILAADV 250 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D SL+ ++E G+RV+ + G+E EALL +L L+H I ++ Sbjct: 251 REMLGLSDRGVIKSLLVDLLEGKGDRVLDHVKAQYDLGVEPEALLHGLLQLIHAITRSKM 310 Query: 298 S-PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L E+ + EL + + + +Q LL G E+ A EM LLR Sbjct: 311 GRPDNLTLHPTEEEIWLAELGKKLSFPVLHRLWQLLLKGHSEVQNAVLPLEAAEMALLRV 370 Query: 357 LAFHPRMPLPEPEVP----RQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 + ++P P + + S +P + PP ++A V + QV Sbjct: 371 IH-ASQLPDPATIIAQFKKQGSVSPSLSPSPEDNRLAPPTSSFQDREASDVK-KNISEQV 428 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 ++ Q + S+ T + ++ + + + + P Sbjct: 429 SPSQFQAKEALSKNGNDFSKSLQPTEKKYFSSFDDDNNSRMAASDYPVEGKQKFSELPEN 488 Query: 473 KEAYRWKATTPVMQQKEVVAT-PKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 + P + K P K E + + A L Sbjct: 489 QPRPSAIPIAPASEAKLKNPHFPPDFKS--------------LTEMLFDNGHALLGHSLE 534 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 E + + L + ++ +Q+L+ AL L ++ ++D Sbjct: 535 DYGR--------LIEYNPPRLLL---ENHSRISGET-RQELSLALKNLTKQAWQVEFLQD 582 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDEES 639 + +E +A I+ +Q + + F DAE + S Sbjct: 583 RKGQPS--FREAEIAQKEARQKA---ILNTPIVQAVLKTFPDAEWVQSS 626 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 162/508 (31%), Positives = 254/508 (50%), Gaps = 19/508 (3%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 VL RK+RPQ F +++GQ HV L N + ++ HAYLF+G RG GKTS A++ AK LNC Sbjct: 7 VLYRKYRPQGFDNLIGQNHVKNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNC 66 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 ++ I PCG C C++ D+IE+DAAS V+D RDL + V YAPA G+ KVY+ Sbjct: 67 QSPIDYNPCGECVCCQD----SNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKKKVYI 122 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS +FNALLKTLEEPP H+ F+LATT+P K+P TILSRC ++ + + + I Sbjct: 123 IDEVHMLSTAAFNALLKTLEEPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIV 182 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 H+++ I+ E + E +AL+L+++ A G +RDALSL DQAI+ +G+V+ Q + + G + Sbjct: 183 HRMKTIVEAESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGKVTLQDIIEITGAV 242 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D + +L++ + ++N E + N G E L EM+ L I + + Sbjct: 243 DTRKIGTLIQYINQSNIEGALEHFNTCFESGQEPHFFLEEMMIYLRDILVNRKLGEKATL 302 Query: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMP 364 + + E+A ++ P I Y L + + D ++ +EMT++ + + P Sbjct: 303 KKGHNDPQFYEIANSVGPDKIYDYMDLLNKAHSNMKFHNDVQLLMEMTIIEMINNQNQSP 362 Query: 365 LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG 424 + +Q + + S Q A T E T++ A ++ +QG Sbjct: 363 ----SILQQQIDELKQFIMGG-------NYSLQQVAVTQNATEKTNEESLANIDIKDIQG 411 Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 A+ L + + +PS P+K + P Sbjct: 412 MMLNDPIGFIEASEEATKKGDDWTNLVT----EETVVIPSEKLTPPSKPLPPHEEHLEPP 467 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAK 512 + P +++ EL K Sbjct: 468 HVDDDEHLEPPSIEVENLATHNNELNPK 495 >UniRef50_A9HZ16 DNA polymerase III subunit Tau n=6 Tax=Bordetella RepID=A9HZ16_BORPD Length = 736 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 186/359 (51%), Positives = 248/359 (69%), Gaps = 1/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARKWRP++F +VGQ+HV+ AL + L R+HHA+LF+GTRGVGKT+++R+LAK Sbjct: 28 MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDSQRLHHAWLFTGTRGVGKTTLSRILAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+ PCG C C EI+ GRFVD +E+DAAS VE+ LL+ YAP GR+ Sbjct: 88 SLNCETGITSKPCGQCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRY 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 148 KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L+ +L +E +A E AL+L+A+AA GS+RDALSLTDQAIA G ++ AV M Sbjct: 208 DAIVGHLQAVLGDEAVACELPALRLIAQAAGGSMRDALSLTDQAIAYSAGNLTEDAVRGM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+EA+ + V+A+ +E + RG+ + L ++ LL R+A+ Q P Sbjct: 268 LGTIDQRHLVRLLEALPAGDATGVLAVADELSTRGLSYAGALADLAVLLSRVAIEQRVPG 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A D + + LA + P +QL+Y + R EL APD G M LR LA Sbjct: 328 ATPADDP-LAADISRLAGVLHPDAVQLFYSVAVHSRGELSLAPDEYAGFVMACLRMLAL 385 Score = 88.8 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 12/193 (6%) Query: 460 RPVPSALEKAPAKKEAYRWKA------TTPVMQQKEVVATPKALKKALEHEKTPELA--A 511 P E P + + A + A+ L + P A A Sbjct: 543 EPPAWVDEDIPDEAQGGYVPAAEFTADPDDEFETLATGASAAELAPVARPQPAPRRARQA 602 Query: 512 KLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQ 570 +++ W ++L + L ++A + W +AV L + + + L ++ Sbjct: 603 APRLDSMSAADWPGLAARLPVTGLAAELARQSEWAGVHGDAVVLRV--AVKTLAESESRV 660 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 +L L G + L I T Q + A ++ AD +Q L Sbjct: 661 RLQTVLCEHFGQGLRLEIEVGATGDG-TAHAVAQIERAARQQAAEHAVAADPFVQALTTD 719 Query: 631 FDAELDEESIRPI 643 F + S+R + Sbjct: 720 FGGRVIPGSVRAV 732 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 135/404 (33%), Positives = 225/404 (55%), Gaps = 5/404 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RK+RPQ F+D+VGQEH+ L N + L RI HAYLF+G+RG GKT+ A++ A+ + Sbjct: 2 YLTLYRKYRPQKFSDMVGQEHITKTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFARAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ + PC C C+EI +G FV++IE+DAAS V+D R + + V Y PA G +KV Sbjct: 62 NCKNSVDGKPCEKCVVCKEIAEGAFVNIIELDAASHNGVDDIRQINEEVLYTPAVGVYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNA+LKTLEEPP +V F+LATTDPQK+P T+LSRC +F + + Sbjct: 122 YIIDEVHMLSPAAFNAMLKTLEEPPPYVVFILATTDPQKIPATVLSRCQRFDFRRISTSD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSAML 241 I L + E+I E A++L+AR A+G +RDALS+ +Q I+ D +++ V ++ Sbjct: 182 ICDCLLDYMQRENIEIEKEAVELIARLADGGMRDALSILEQCISFYIDEKITHSKVLKLV 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA- 300 G +D+ ++ A++E + + +A+ NE +G + ++L + + + + Sbjct: 242 GAVDNALLFEMMNAVIEMDAAKAIAVCNEINQQGRNIKQFAKDLLMHTRNLLIAKTTEQK 301 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + + + A + I Y + E+ + R+ +E+ +++ Sbjct: 302 TEILDYTQEHVRELTQQANELAIETIFRYIKNFTELDMEMKTSTFPRITLEVAVIKLC-- 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV 403 P + L + V + + + + +++ + T Sbjct: 360 TPEVDLSKDSVLDRMLSIEKQLEEVKKNGIKVVEKASEEAVVTE 403 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 137/377 (36%), Positives = 217/377 (57%), Gaps = 6/377 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L RK+RP F +VVGQ H++ L N + RI HAYLF G RG GKTSIA++ AK Sbjct: 1 MAYQALYRKYRPSNFDEVVGQTHIIQTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC A PCGVC+NC+ G D+IEIDAAS V++ R+L+D V+YAP +G++ Sbjct: 61 TLNCTNSQDA-PCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQGKY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHM++ +FNALLKT+EEPP HV F+ ATT+P K+ TI+SRC +F + V Sbjct: 120 KIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTEPNKVLPTIISRCQRFDFNKVSV 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+++L + E I + L L+A+ A+G +RDALS+ DQ +A + + + Sbjct: 180 NDIKYRLSVVCKNEGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCTSHIDVNDIRKI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 G + + L ++ + + +R + I + + G++ + L + + +L ++ S Sbjct: 240 YGVITSEDIGQLFSSIYKKDVDRFIKDIQKYSDMGMDIKRLTADFIHMLKDSLILDYSEN 299 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA--L 357 + L +DM + +R+ ++ P + L+ + YA + +E +LL+ Sbjct: 300 STLVSDMN--KDMIRKYFKSAPIHFRIQCMEELMDTYNKYTYASNALDYLEASLLKISSY 357 Query: 358 AFHPRMPLPEPEVPRQS 374 ++ P+ E E S Sbjct: 358 SYEPKSNKFESEYDNNS 374 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 139/356 (39%), Positives = 213/356 (59%), Gaps = 3/356 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP+ F++V+GQ H++ L N + GRI HAYLF GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPRNFSEVLGQNHIVRTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PC C C +D+IEIDAAS V+D R+L DN+ YAP+ ++KV Sbjct: 62 NCPNSVEGEPCNRCQICESANNNSLIDIIEIDAASNNSVDDVRELRDNIIYAPSICKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TILSRC +F K + + Sbjct: 122 YIIDEVHMLSGSAFNALLKTLEEPPSHAIFILATTEPNKIPATILSRCQRFDFKRIPSKV 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I + I + +I E RA+ ++AR GS+RDA+S+ +Q ++ D ++ V +LG Sbjct: 182 ISQNIGKIAKDSNINIENRAIAMIARHGNGSMRDAISILEQCVSYND-VLTYDDVCDILG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 T++DD +LV+ + + N + V+ I++ GI+ L+ ML L I + + Sbjct: 241 TVNDDTLYTLVKRINDRNAKEVINQIDKLMLYGIDVSNLIKAMLSFLRDIVIYKTCGTES 300 Query: 303 GNDMA-AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + I ++ + A + + + L+ + ++ YA R+ E+T+L+ + Sbjct: 301 EEILETEINDKILK-ASEFDMSFLSNAIEKLIDLQGKIRYAQSPRILFEITVLKLM 355 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 141/358 (39%), Positives = 220/358 (61%), Gaps = 2/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + L RK+RPQ F D+VGQ HV+ L N L GRI HAYLF+G RG GKTS A++ A Sbjct: 1 MGFLSLYRKYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+NCR+I++G+ +D+IEIDAAS +++ R+L + V++ P G + Sbjct: 61 ALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNEGEY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPPE V F+LATT+P ++ TILSRC +F L V Sbjct: 121 KVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQRFDFSLLPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ +L +I +E + E AL +LAR+A G LRDA+SL DQAI+ ++ V M Sbjct: 181 REIQERLRYICEKEEVEFEEEALNILARSANGGLRDAISLLDQAISYTGNNLNPIDVQGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL-SP 299 LG + + ++ ++ N + L+N +RG L+ +++ ++ +V+ P Sbjct: 241 LGKVSREVLSQFIKYVLNGNSVEALKLVNRIISRGNNVGRLIGDLIEYGRQLLLVKECGP 300 Query: 300 AALGNDMA-AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + + + ++ AR I + + L + +++ Y+ + R+ +E+ +++ Sbjct: 301 DSRIIEYPDEVLEKISGEARAIKTSRLIEIIDQLTVMERDIKYSDEPRLILEVGIIKM 358 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 144/409 (35%), Positives = 220/409 (53%), Gaps = 1/409 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ F +V QEH+ L + ++ RI HAYLF+G RGVGKTS+AR+LAK Sbjct: 1 MSYIVLARKYRPQNFKEVYAQEHITEILQSAIATNRIAHAYLFTGPRGVGKTSLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC C NC EI G D+IEID AS T V+D R+L + Y + + Sbjct: 61 SLNCVNGPTTTPCNACSNCLEITAGTSPDVIEIDGASNTSVDDIRELQRELLYPASSSNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS+++FNALLKTLEEPP++V F+ ATT+PQK+ TI+SRC ++ K + + Sbjct: 121 KIYIIDEVHMLSKNAFNALLKTLEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIPI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I + +L L+AR A+G +RDALSL DQAI+ ++ V + Sbjct: 181 ASIVQRLQEISVLEGIKIDSESLYLIARKADGGMRDALSLMDQAISYCLNNITIDKVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + + + + + ++ ++ +GI+ + + M + I +++ Sbjct: 241 FGMIPNQVYQKFLTLIYNKDTQGLINELHLIFEQGIDLQEFIANMQEFVR-ILILRKLQV 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ELA + L+ R +L + + + +E +++ Sbjct: 300 QIKDINPDELSLFDELAELFGQNKLLYILSYLIACRNDLRGSSNPYLILEALMIKLCKLD 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 + A P ++ +PT S + VPL E T Sbjct: 360 EMEDIASLIGKININAFAQPVSMASPTTAKTIQSSYVASSAEVPLREET 408 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 163/474 (34%), Positives = 237/474 (50%), Gaps = 12/474 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVL RKWRPQ F+DVVGQ V L N L GRI HAYLF+G+RG GKT+ A++LAK + Sbjct: 5 YQVLYRKWRPQVFSDVVGQPQVTVTLQNELKAGRIAHAYLFTGSRGTGKTTCAKILAKAV 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PCG C++C I+ G +D++EIDAAS VE+ R+L + + PA +++V Sbjct: 65 NCLSLKEGDPCGECESCVGIDNGSVMDVVEIDAASNNGVENIRNLREEASFTPAAAKYRV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+ KLP TILSRC +F +D E Sbjct: 125 YIIDEVHMLSIGAFNALLKTLEEPPAHVVFILATTEVHKLPATILSRCQRFDFHRIDPEV 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L+ + EE+ E A L+AR A+G +RDALSL DQ + +++ + VS G Sbjct: 185 IADRLQFVAGEENAHLEREAALLIARIADGGMRDALSLLDQCM-GRSSEITLEVVSETAG 243 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--SPA 300 D SL + ++ NG + + I+E + L E+ G + +++ +P Sbjct: 244 LAGRDHLFSLADTVLRQNGGQALEQIDELHKASKDMVRLCEELAGHFRNLMLLKTMKNPQ 303 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L +++ A L ++ + DRR+ +EM LL+ + Sbjct: 304 NLIVVSQDEYQKLQVQAEAFTLAGTIHAIDVLQAAKERMFRGFDRRVELEMALLKLCS-- 361 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PE+ A + A + P+ A AP++ P + + + Q Sbjct: 362 -------PELDESVDAILRRLARLEKQPRAVIPEQAEAAAPSIKPPAAPMESQRPQTKPQ 414 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + EPAA P E D + + P E Sbjct: 415 GTNAEPEGCGEEPAAEAADMPQEQEPPEDKKGPVDMEALQQGAKRMTDWPEVLE 468 >UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8F3_MAGSM Length = 605 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 201/643 (31%), Positives = 300/643 (46%), Gaps = 44/643 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY VLARKWRP+ F D++GQEH + AL + L GRI HA+LF+G RG+GKT+++RLLA Sbjct: 6 SYVVLARKWRPRRFEDLIGQEHTVQALRHALEQGRIPHAFLFTGIRGIGKTTLSRLLAMC 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC TG+TA PCG CD+CR I +G D+ E+DAASRTKVE R+LLD V Y P+ R+K Sbjct: 66 LNCGTGVTANPCGACDSCRAIVRGEHPDVFEVDAASRTKVEQMRELLDGVAYTPSLSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y++DEVHMLS SFNALLKTLEEPP HVKF+ ATT+ +K+ TILSRC ++ L+ LD + Sbjct: 126 IYILDEVHMLSASSFNALLKTLEEPPTHVKFIFATTEVRKILPTILSRCQRYDLRRLDRD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L H+L+ E IA++ L ++ AA+GS+RDALSL DQAIA G G+V VS +L Sbjct: 186 GLARYLAHVLDVEQIAYDQEGLAAISHAADGSVRDALSLLDQAIAHGGGRVDYTHVSGLL 245 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D ++L + ++ G+E LL ++L + H++ Sbjct: 246 GLTDRQAVVALFADLCRGRLLEMLERAAYFHRDGVEPVVLLNDLLDITHQVTRELAVGVG 305 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 + ++E+ + +Q+ YQ LL GR++L A R +EM LLRA P Sbjct: 306 DAAQALSEHEGLKEVWPKLGLEHLQMLYQVLLRGREDLQMARLPRQALEMLLLRAAHLRP 365 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 PL + Q A V P V Q+ P T L+ Sbjct: 366 VPPLKQLVESLQRQAGVEPGERQASPAVKKFDAPGVGQSEVAP----TVHFAPKSAALEA 421 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 Q + + P+ + P Sbjct: 422 PQAVQAPQVKRAKKQPTVLAPEPQPPVVPPDWPAVPPLQEEPTVVSPTPPAT-------- 473 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL 541 ++ E + +K L +K + + L+ + + + + Sbjct: 474 ---VESWEKLIEAARIKFPLLAQK---MESHLSLLSYTGGSGPHDPPCMEV------MIA 521 Query: 542 NAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV-RTPL 600 +A+ E S+ H L +L + G + I + + T Sbjct: 522 HAFAGE----------PSKVH----KNLMDLLVSLKLPNGV---VHIRKSSDGTRPDTEA 564 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E ++ + + D IQ + R F+A++ + P+ Sbjct: 565 EKQKKAQDAYQNALTREVADDPLIQEIERRFEAKIIH--VEPV 605 >UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXI6_DESAD Length = 638 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 179/650 (27%), Positives = 289/650 (44%), Gaps = 24/650 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L K+RPQTF +V GQE V T L+ + ++ AYLFSGTRGVGKT+IAR+ AK Sbjct: 1 MSTSNLTAKYRPQTFGEVAGQEAVKTILSRAAAQDKVAPAYLFSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ TA PC CDNCR+I G VD++EIDAAS KV+D R L +++ YAP R+ Sbjct: 61 ALNCKNAPTAEPCNECDNCRQITAGVGVDVVEIDAASHGKVDDARRLKEDIGYAPIEFRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ +FNALLKTLEEPP H F++ATT+ K P TI+SRC + K L Sbjct: 121 KVFIIDEAHMLTVQAFNALLKTLEEPPPHATFIMATTETHKFPATIISRCQHYAFKMLTN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +++ L +ILN E I E A+ L+A+ GS+RD++SL Q +A G ++ + V ++ Sbjct: 181 DELIAHLSNILNMEQIEFEQGAVDLIAKRGAGSVRDSMSLLGQVLALGSEKLLEEDVRSI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +L++A+ + V + + RG++ + E+ + ++ S Sbjct: 241 LGLAGRDVFFTLMQAIHGRDLVAVGDTVQQVLGRGLDLGFFIRELGNCWRNMFLLNQSGE 300 Query: 301 A---LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L + + A+T + I +Q + G++++ + + M +E+ LL Sbjct: 301 RAVPLLGLSSEEAAEFMKWAQTFDRSFIHACWQMTVDGQRKVMTSLEPAMALELLLLNMA 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMT---PTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 + + + + P Q PPQ Q P +T + Sbjct: 361 SLTDLISMERAGALASAAPSPQQAPQAAPAVPNQAPPQTPPPSQPMGQQPGGQTPPWQNS 420 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 +Q +Q+ RP+ A S+L A + Sbjct: 421 PQQGMQQQVPPQNQGMQPQGMGANGRPMGRTESGSPAGNRSANDMGADDSSLPDAAGLQT 480 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 + P + + P + P A ++ + + + V+ Sbjct: 481 DSDLNSLVPQSENPAPESIPPLERVPEPAPAKPSFPASVSG-PRDFEGFLQYVADSGANG 539 Query: 535 LVEQVALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + E D + L +S Q + R ++ + +S G VEL I Sbjct: 540 STSGL-SKCKGELIDGKLVLTCANSFHQGQVAGRESRGVVERLVSEYFGPEVELEIQISS 598 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 R+ + R+ + + +++ + F A + SI P Sbjct: 599 KGKRRS------------RQEIRDDVESHPDVKRVMDAFGASII--SIDP 634 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 158/453 (34%), Positives = 246/453 (54%), Gaps = 21/453 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLAR++RPQ F++VVGQ V AL N + R+ HAYLF+G RGVGKTS+AR+LAK Sbjct: 6 MQYTVLARRFRPQNFSEVVGQGMVAQALQNAIRGDRVAHAYLFTGARGVGKTSMARILAK 65 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG C+ C+ I G VD++EID AS ++D R L NV R ++ Sbjct: 66 ALNCPHTQDGIPCGECEVCQNIAVGSDVDVLEIDGASNRGIDDIRSLRANVNVRSMRSKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML++ +FNALLKTLEEPP +VKF+ TT+P KLP TILSRC +F ++ Sbjct: 126 KIYIIDEVHMLTKEAFNALLKTLEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEE 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E ++ A+QL+AR A GS+RD+ S+ DQ ++ G+ ++ ++V + Sbjct: 186 NSICDRLKQIAEAEQVSVADDAIQLVARRAGGSMRDSQSIFDQLLSFGESHLTAESVHRI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT D++ + L++A++E + + + A G++ + ++L L +++V + Sbjct: 246 LGTASDERLIELIDALIEQKRDVALTHFDAALNAGVQLNEFVDQLLNYLRDLSVVATGAS 305 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA-- 356 L + ++ A +Q L R + A R VE+ L+R Sbjct: 306 QVTLLSISEMNRASLQRQAEAWGIQTCLAAFQILNEARNRMFRASHGRALVELALIRMSL 365 Query: 357 ----------LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP 406 L+ ++P P RQ+ ++ AV P PP P PQ++ P Sbjct: 366 LEDLDLLSRFLSSGGQIP-AAPAAVRQASPSLSAAAVSQPVSEPPTP---PQEST---EP 418 Query: 407 ETTSQVLAARQQLQRVQGATKAKKSEPAAATRA 439 + + + + +++ + + S PAA T Sbjct: 419 SSDQKKIEKKNEIESPVASESIESSPPAAETVP 451 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 134/354 (37%), Positives = 219/354 (61%), Gaps = 2/354 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RKWRP+TF+++VGQE ++ L N ++ ++ HAYLFSG RG GKT+ A++LAK + Sbjct: 2 YLALYRKWRPKTFSEIVGQETIVKILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE + PC C +C I +++ EIDAAS +++ R+L ++++ PA+G++KV Sbjct: 62 NCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGIDEIRELRESIKLVPAQGKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPPEHV F+LATT+ K+PVTI+SRC +F K + + Sbjct: 122 YIIDEVHMLTNEAFNALLKTLEEPPEHVIFILATTEFNKVPVTIVSRCQRFDFKRISTKT 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L++I +E + +E AL L+A A+EG LRDALSL DQ + + +++ + +LG Sbjct: 182 IWEHLKNIAEKEKLQYEAEALHLIAEASEGGLRDALSLMDQILVF-NPKITVEDTLKVLG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + L L+ A+ E N +++ I E RG++ + + ++L + + +++ + + Sbjct: 241 FVSWRKILELISAIRENNQLKIINEIAEVVERGLDVKLFVQQILQYVRYLNLIK-NGIEV 299 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 M + ++R A + L + + +E+ YA R+ E+ LL+ Sbjct: 300 EELMPEVLEKLRSEAALWEEDKLFLLWDDIARLEREVRYASFPRIWAEVGLLKV 353 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 147/473 (31%), Positives = 245/473 (51%), Gaps = 8/473 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R++RP+ F DV+GQ+ V+T L N +S I HAYLF+GTRG GKTS A++ A+ Sbjct: 1 MSYKALYRRFRPKVFEDVIGQDQVITILKNQISSSNIAHAYLFTGTRGTGKTSTAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + A PC C+ C I +D+IEIDAAS V++ R++ +NV+Y P++G++ Sbjct: 61 AVNCLSAEDANPCNQCEVCEGILTENIMDVIEIDAASNNGVDNVREIRENVKYPPSKGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TILSRC +F K + + Sbjct: 121 KIYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRFDFKPVRI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE I + I E AL+L+A ++G+LRDALS+ +Q I+ + ++ V + Sbjct: 181 NDIMKRLESICEDIGIKTEEEALRLIALNSDGALRDALSILEQCISYTEDTLTYTNVVNI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG ++ + LV+ + + V+ LIN+ G + L+ +++ I + +++ Sbjct: 241 LGMVNYEFIFDLVDKIAAKDTSSVLTLINDILMEGKDAGILMKDIISHFRSILLAKMNVQ 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + R+R+ I + L +L Y+ + +E+ ++ + Sbjct: 301 LDELLTLPEERQDRLRQQGALFTINQITSFIYNLSDIESKLKYSAQPKTLIEIGIVGLCS 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 L Q + + +P Q + P ++ + ++ Sbjct: 361 KALDDSLEGLIERVQDLERKLASG-----NIKVEPHYNKSQ-ISTPQNRSSHKTQPIEEK 414 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 + Q + + +T PV++ A ++ + Q EK Sbjct: 415 QEYKQPESSPPSVDANESTAEEPVHSGAPLNFDALKESWQQILEELRKEKKAQ 467 >UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 Tax=Desulfovibrionales RepID=A1V9U7_DESVV Length = 622 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 178/642 (27%), Positives = 272/642 (42%), Gaps = 54/642 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L ++RPQTFA+V GQE V L+ R+ AYLFSGTRGVGKT+IAR+ AK Sbjct: 1 MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC T T PC C+ CR++ QG VD++EID AS ++D + L + + YAP GR+ Sbjct: 61 ALNCATAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L +L E + ++P A++L+AR A GS+RD++SL Q +A G+ +++ + Sbjct: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L L+EA+ + V ++ E RG++ L E++ + M++ + Sbjct: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE 300 Query: 301 A--LGNDMAAIELRMR-ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A D+ E R A+ P I +Q L G++ + Sbjct: 301 AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRV----------------LT 344 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + P M L + + P + +P AP+ E + AA Sbjct: 345 SLEPAMALELLLLNLAMLPRLMPVESL-------RPSGGGASAPSGSAAEGPASGCAATI 397 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 QG + + A P + A P+ + A R Sbjct: 398 PTPGTQGTQGTAPAAGMTPSTAAPATPSD----APSPRVPWDEAPPTPPRSGIPPRPAPR 453 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS----QLSLP 533 +P + ++ + + + W + + Sbjct: 454 MPEASPATGRPASTSSSAGASPS-----HSDASDTAEHTPSGPRTWDGFLEFCQGRNGQG 508 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + V A E D + L SS L + Q LA + G + + Sbjct: 509 GRLATVLRQATPEHGDGVLRLATMSSVQYERLTDAATQTTLAGLVRDYFGDACRVKVH-- 566 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 P + E +A A +Q L+ A Sbjct: 567 -------PPTRVRRTEAELRKEA----EAHPAVQLLKEEMGA 597 >UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alphaproteobacteria RepID=Q0BVJ3_GRABC Length = 686 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 166/384 (43%), Positives = 242/384 (63%), Gaps = 10/384 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLAR++RP+ F D++GQ+ ++ L N +L R+ HA++ +G RGVGKT+ AR++A+ L Sbjct: 48 YRVLARQYRPRHFDDLIGQDALVRTLRNAFALNRVAHAFMLTGVRGVGKTTTARIIARAL 107 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G TA PCGVC NC I R D++E+DAASRT V+D R++++ ++ P + Sbjct: 108 NCTGADGQGGPTADPCGVCPNCTAILADRHPDVVEMDAASRTGVDDVREIIEATRFRPLQ 167 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R KV++IDEVHMLSR++FNALLKTLEEPP HV F+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 168 ARTKVFIIDEVHMLSRNAFNALLKTLEEPPPHVTFIFATTELRKVPVTVLSRCQRFDLRR 227 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG--QVSTQ 235 +D E + IL +E ++ P+AL L+ARAA+GS+RD LSL DQAIA D +S Sbjct: 228 IDAEVLSAHFSRILEQEGVSASPQALALIARAADGSVRDGLSLLDQAIAQNDPGIPISEA 287 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V+ MLG D L L+EA++ + +A+ + A ARG + +L ++L L+H + + Sbjct: 288 QVADMLGLADRGMVLDLLEALMAGDTASALAVTDTAHARGADLGMVLQDLLELIHTLTRL 347 Query: 296 QLSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 + P A R+R LA + + +Q LL G E+ APDRR EM L Sbjct: 348 KTIPHLRTAPGMAEAERLRGSALADRLAMPVLGRAWQMLLKGIAEVEAAPDRRAAAEMVL 407 Query: 354 LRALAFHPRMPLPEPEVPRQSFAP 377 +R L + +P P V R + AP Sbjct: 408 IR-LCYVADLPPPAELVRRLTGAP 430 >UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZPF5_9PLAN Length = 618 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 190/652 (29%), Positives = 297/652 (45%), Gaps = 69/652 (10%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V+AR++RPQ+F ++VGQ V AL N + GR+ HAYLF+G RGVGKTS AR+LAK L Sbjct: 18 YVVVARRYRPQSFEELVGQSQVAQALKNAIERGRVGHAYLFTGARGVGKTSSARILAKAL 77 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ G +ATPC CD CR + G VD++EID AS +E+ R L NV P+R RFK+ Sbjct: 78 NCQRGPSATPCNECDICRSVTVGEDVDVLEIDGASNRGIEEIRQLRSNVNIRPSRARFKI 137 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHM ++ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F + +++ Sbjct: 138 YIIDEVHMFTKEAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFGGIRMDE 197 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L +I+ E + EP AL+LLAR A GS+RD+ SL +Q +A G +++ V+ MLG Sbjct: 198 IVTRLAYIVENEGVTAEPEALRLLARKANGSMRDSQSLLEQLLAFGGREITVADVNQMLG 257 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIA--MVQLSPA 300 +Q ++ A+ + V+A ++A RGI+ L+ ++LG + V P Sbjct: 258 AAGSEQIAVIMTALAARDAAAVLAYFDQALTRGIDPGQLIEQLLGFFRDMMTLAVGAGPT 317 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L + ++ +A++ ++ Q L + + R+ EM L+R Sbjct: 318 LLQTVLPTDAEKIEAVAKSYGLANVMAAVQILDDALVRMQRSAHARILAEMALVRVCQLE 377 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + + +S P+ + P + P +T Q A ++ + Sbjct: 378 DLQSVADLVETIRSGKPLPARPAIQIAAAPQPSAAPQLPPQAAPQAMSTVQTDVAAERTE 437 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 ++ S P V + E + E R Sbjct: 438 SRVNSSDPASSGPVRQASPSEVTSYVEEPDPEL-----------------GLSEPPRTNG 480 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 K + AK W ++ +S LV + A Sbjct: 481 -----------------------IKLTDSTAKNI--------WEGILTDMS--DLVGEYA 507 Query: 541 L--NAWKEESDNAVCLHLRSSQRH----LNNRGAQQKLAEALSMLKGSTVELTI-VEDDN 593 N + + ++ L A+ +L L+ G+ V L V +D Sbjct: 508 RPYKTVATSGPNRLVVSFSAAYNSQVEFLRRPAAKTRLEGMLTEAVGNPVTLEFKVLNDV 567 Query: 594 PAVRT---PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 PA +T P + + + + +Q F AE+ S+R Sbjct: 568 PAAKTQEPPKRSAPSSGQMIRK-----VQQNQLVQQAIEMFGAEV--TSVRA 612 >UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propionibacterium acnes RepID=Q6ABA1_PROAC Length = 957 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 168/637 (26%), Positives = 266/637 (41%), Gaps = 57/637 (8%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L R++RP+TF +V+G++HV+ L + R++HAYLFSG RG GKT+ AR+LA+ LN Sbjct: 108 LALYRRYRPETFDEVIGEDHVIEPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALN 167 Query: 64 CETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 CE G T TPCG C +CR++ G +D+IEIDAAS V+D RDL + +AP R+K Sbjct: 168 CEQGPTPTPCGTCQSCRDLACGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYK 227 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDE HM++ FNALLK +EEPP HVKF+ ATT+P+K+ TI SR + + + + Sbjct: 228 IYIIDEAHMVTPQGFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPK 287 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI-ASGDGQVSTQAVSAM 240 + L + +E I + L L+ RA GS+RD+LS+ DQ + + DG VS + +A+ Sbjct: 288 VLVEYLAELCGKEGIDVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAAL 347 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +V+A + +V A I++ G + ++L + + +V P Sbjct: 348 LGYTPEALLDEIVDAFAAGDAHQVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPD 407 Query: 301 A----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 A L + R+ ++ + L G + R+ +E+ R Sbjct: 408 ACRSGLIDVSPEQATRLAHQVSGFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRI 467 Query: 357 L----------------AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA 400 L R+ + P + T PQ S PQ Sbjct: 468 LLPGADTDGRGIHARLERLERRIGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHW 527 Query: 401 PTVPL--PETTSQVLAARQQLQRVQGATKAKKSEP-----AAATRARPVNNAALERLASV 453 P L PE S + + + + S P N + S Sbjct: 528 PAENLQNPERRSAPEHHDAPSPGQRPSGRPRPSRKDYRPGNQLAEQPPSNQHGDDGQMSQ 587 Query: 454 TDRVQ------ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 R Q R P + P++++ P E Sbjct: 588 GPRQQGGPSTSQRQQPRPQDHQPSQRDRQDTPPAQPQQPSAEQGGRADDA---------- 637 Query: 508 ELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW---KEESDNAVCLHLRS--SQRH 562 R W + + V + LN + E N L + ++ + Sbjct: 638 ------INITTLRREWPQVLEAVKDGGRVAWMVLNQYAQVLEVHGNQATLGFSNIGAREN 691 Query: 563 LNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 + L +A+ + G + T V + PA P Sbjct: 692 FAAGNYPKVLHDAVVKVLGVDLAFTAVVGEPPAAVRP 728 >UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 Tax=Cystobacterineae RepID=A7HGU5_ANADF Length = 606 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 202/652 (30%), Positives = 298/652 (45%), Gaps = 67/652 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F ++ GQ+HV+ L+N L G++ HA+LF+G RGVGKT+ ARL+AK Sbjct: 1 MNYLVLARKYRPQQFGEMSGQQHVVRTLSNALKTGQLAHAFLFTGPRGVGKTTTARLVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C EI +GR VD++EIDAAS V++ RD+++ V+Y PAR R+ Sbjct: 61 ALNCEKGPTAEPCGACTPCVEIAEGRAVDVVEIDAASNNGVDNVRDIVEAVKYRPARDRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DEVHMLS +FNALLKTLEEPPEHVKF+LATTD K+P TILSRC +F + L + Sbjct: 121 KVFVVDEVHMLSTGAFNALLKTLEEPPEHVKFVLATTDVHKVPETILSRCQRFDFRRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL + E + P AL L+AR AEG +RDALSL DQ A+ AV+ Sbjct: 181 QQIADQLAKVAEAEGMRLAPGALALVARQAEGGMRDALSLLDQVRAAAGDAPDEAAVAEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + A+V G ++A + ARG+E + + E++ L + + +L PA Sbjct: 241 LGAVDAAAISRICGALVHREGGALLAELEALHARGLEMKRVAEEIVRHLRNVVVARLVPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + +R A P + + ++ + R +E+ LL + Sbjct: 301 TPLDLPDGELAEVRAQAAAADPAQLTRLFDLAQRAVVQVKLSEQPRYALEVALLEGVFLA 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + E ++ A AP + PP P + P ++ A Sbjct: 361 PGAQVSELVARLEALARGAPLPPRSAPPSPPPPSAVPAPGGQTGAGGAAARTGLASSGTP 420 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK--KEAYRW 478 ++ P A+ P A +R AP +A RW Sbjct: 421 GCAEGSEPAGWRPLPASTGSPA--------AGHPERSSDASAAEPSRGAPTAYGSDAERW 472 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 +A +++ P +++Q Sbjct: 473 RAAVDEVEKVSPAGAP----------------------------------------MLKQ 492 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR- 597 L + D + L + + + + +L L+ G V L I PA Sbjct: 493 AVL---RGIRDGEIDLVMPTDFLARSVERRRSELEPVLTQFLGRPVRLAISVGAPPAAEA 549 Query: 598 ------TP-------LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 TP A + + A+ RE+ NI+ R D +D Sbjct: 550 QSPDATTPTPVPASIAATEAAERQARSARVREAARNHPNIREAVRILDGGVD 601 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 177/646 (27%), Positives = 289/646 (44%), Gaps = 31/646 (4%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + V ARK+RP F+ V+GQ H+ T L N + + HA+LF G RGVGKT+ AR+LAK + Sbjct: 4 FVVSARKYRPSVFSHVLGQAHITTTLKNAIRTNHLAHAFLFCGPRGVGKTTCARILAKAI 63 Query: 63 NCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ PC CD+C+ Q ++ E+DAAS VED R L+D V+Y P G +K Sbjct: 64 NCQQLTADIEPCNACDSCKSFNQRTSFNIYELDAASNNSVEDVRSLVDQVRYPPQNGAYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + + E Sbjct: 124 IYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKVLPTILSRCQIFDFQRIKPE 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I QL+++ +EHI ++ AL L++ A+G+LRDALS+ D ++ G G+++ +A L Sbjct: 184 DIVQQLKNVSEQEHIPYDEEALHLISLKADGALRDALSMFDVIVSFGAGKLTYEATLENL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 LD L EA+++ + + + + +E G + L ++ + + Q P Sbjct: 244 HILDYSCYFKLTEAILQNDIKACLLIYDEIIQSGFDGLYFLEGLVAHFRSLLVAQ-DPQT 302 Query: 302 --LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL----R 355 L +I+ R A+ P + Q + + ++R VE+ L+ + Sbjct: 303 LPLLEVAPSIQERYGMQAQQASPGFLLDALQLANQCALQYKESLNKRFHVELALIELASK 362 Query: 356 ALAFHPRMP-LPEPEVPRQSFAPVAP-TAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 HP+ LP P V S P P + PT +P +A V E T Sbjct: 363 MSTGHPKDSVLPNPGVTTVSNNPTIPIVSASKPTNASDRPSAA------VNKTEATVVKD 416 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 Q + K+ + A++ +++ A P+ ++K + Sbjct: 417 NKEADKVIEQVQEELPKTAVSVASKYDRKEEEITQQIKEERPNPAAGLAPNIVKKGVLQS 476 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 P + + + + + E + + E + W A QL L Sbjct: 477 -----TIKIPQLSHIKANIDQPKVVETVNTTTVMEASVEFTKEIVLV-HWQAYTQQLKLA 530 Query: 534 KL--VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + + LN E +N + + ++ + E L + L Sbjct: 531 ERMPAYNL-LNQPIELENNTITIKFTNTVE----ERILADIKEELVNYLRNN--LKHPAI 583 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 D AV TP + + R + ++QTL+ E+ + Sbjct: 584 DVKAVFTPTQSGPQRPYTAQERFRYLANKNPHLQTLKEQLQLEVVD 629 >UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 Tax=Sphingobacteriales RepID=C6W6R9_DYAFD Length = 621 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 170/650 (26%), Positives = 274/650 (42%), Gaps = 44/650 (6%) Query: 1 MSY-QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 M + V ARK+RP TF VVGQ H+ T L N + + A+LF G RGVGKT+ AR+LA Sbjct: 1 MDHFVVSARKYRPVTFDSVVGQSHITTTLKNAIRTNHLAQAFLFCGPRGVGKTTCARILA 60 Query: 60 KGLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC+ G CG C++C + ++ E+DAAS VED R+L+D V+Y P G Sbjct: 61 KTINCQNLGDDVEACGECESCVSFQNNASFNIHELDAASNNSVEDIRNLIDQVRYPPQTG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++K+Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + Sbjct: 121 KYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTD-QAIASGDGQVSTQAV 237 + I H L I +E I E AL+L+ + A+G LRDALS+ D S + ++ AV Sbjct: 181 QSKDIAHHLLDIAKKEGINAEHEALELIGQKADGGLRDALSMFDLNVTFSTNNHLTYAAV 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 L LD D + +A+ + R + L +E +G + +V +L + + + Sbjct: 241 LENLHILDYDYYFKITDALTAGSIARSLVLFDEILRKGFDGHLFVVGLLEHFRNLLVCK- 299 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPY--APDRRMGVEMTLLR 355 PA + + + L +++ L + G+ ++ Y A ++R+ VE+ L++ Sbjct: 300 DPATVTLLQVSESAERKYLEQSLMADMSFLLSALSITGQCDINYKSAKNQRLHVELCLMK 359 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP-LPETTSQVLA 414 + L + A V + P APQ + V P S Sbjct: 360 LANLPQVLQLHSLAAVDE----TAKKKVEPQQSLNNGPAPAPQPSAVVNGQPSNGSAYAQ 415 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 A + P A + + + + +P S L+ + Sbjct: 416 APAP-----QPAMPQHPSPQQAMHQQTAPQQVMPQQTAPQQVTPQQPASSRLKNTISLTP 470 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPE-LAAKLAAEAIERDPWAAQVSQLSLP 533 + KE A P +E+ P + + W + Sbjct: 471 SLTPPTQQAA---KEPAAQP-----RVEYAAVPNGTKKEELTLPNLQRLWYEFSQKRQQA 522 Query: 534 K--LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 EQ+ LN + + + + L + + + L L + +L I Sbjct: 523 GNSTTEQITLNREFQLNGTTIEIALDNDHQQDAVMNMRYDLLGFLKSRLDAP-KLDINPR 581 Query: 592 DNPAV-----RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 P TP E + + + L++ ++D Sbjct: 582 VAPQEVNRLPYTPAEKFNYMA-----------EKNPYLLELKQALGLDVD 620 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 161/462 (34%), Positives = 233/462 (50%), Gaps = 28/462 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRP TF +++GQ+H+ + R+ HAYLFSG RG GKTS+AR+LAK Sbjct: 1 MAYLSLYRKWRPSTFKEIIGQKHISIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C NC+ I G +D+ EID AS V++ R L ++V+ P G Sbjct: 61 AVNCLDLKNGNPCNECANCKSINTGASMDVYEIDGASARGVDEIRVLRESVRTLPVAGNK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPP HV F+LATT+P K+P+TILSRC ++ + V Sbjct: 121 KVYIIDEVHMLTKEAFNALLKTLEEPPAHVLFILATTEPAKIPLTILSRCQRYEFHRISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI-ASGDGQVSTQAVSA 239 I+ L HI E H++ P A L+A AEG LRDALSL DQ AS ++S + V Sbjct: 181 NDIKEHLLHISQESHLSLTPEAAALIAVRAEGGLRDALSLLDQCSGASAGNELSAEIVYD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +Q + L +V + L + G E A+L ++L I + +++P Sbjct: 241 LLGLTDKEQIIDLFHMIVCGKSSATLQLFYKILQDGKEPSAILSDLLEHFRSIMICKVNP 300 Query: 300 AALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A ++ +++ A+ + + + +L E + RM EM LLR Sbjct: 301 NAPELSAYGNKISVIQKDAQELSDAYLDALFDSLHHSFSEANRSSSPRMSAEMGLLRLCR 360 Query: 359 FHPRM-----------------------PLPEPEVPRQSFAPVA-PTAVMTPTQVPPQPQ 394 LP+ E + +P P + P P Sbjct: 361 LRGSQALDSLEERITALEKNVSVLMKSSTLPQTETIPAAPSPAILPPTISIPLVTPTALT 420 Query: 395 SAPQQAPTV--PLPETTSQVLAARQQLQRVQGATKAKKSEPA 434 AP + T P+ A + +++ ATK+K S P Sbjct: 421 PAPAASTTTCPDSPKEVVPPPPADKTPVKMEPATKSKPSLPC 462 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 141/383 (36%), Positives = 213/383 (55%), Gaps = 10/383 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N +S G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMFRPQSFQDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C C+ I QG D+IEIDAAS V++ R++ D V+YAP+ ++ Sbjct: 61 AINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI +L + E+ + ++ AL+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 EQITDRLRFVAEEQQLDYDNEALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++D+ L + +++ N + ++ + G E L+ +M+ + M + Sbjct: 241 TGSVDEAALNELFKDVIDGNVKNAFTRYHQFISEGKEVNRLINDMIYFVRDTIMNKTV-- 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 N+ A + M + + + ++ ++ + E+ L++ Sbjct: 299 ---NNHAEFDALM-----NFDLDMLYHMIDIINDTLVSIRFSVNQNVHFEVLLVKIAEMV 350 Query: 361 PRMPLPEPEVPRQSFAPVAPTAV 383 P V A V Sbjct: 351 KSQPDTVTNVATTQVASQPNNEV 373 >UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 Tax=Alphaproteobacteria RepID=A1B872_PARDP Length = 592 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 165/412 (40%), Positives = 245/412 (59%), Gaps = 9/412 (2%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +YQVLARK+RP+TFAD+VGQ+ ++ L N + RI A++ +G RG GKT+ AR++AKG Sbjct: 7 NYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFVMTGIRGTGKTTTARIIAKG 66 Query: 62 LNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 LNC + G T PCGVC++C I +GR VD++E+DAASRT V D R+++++V Y A Sbjct: 67 LNCTGPDGQGGPTTEPCGVCEHCVAISEGRHVDVMEMDAASRTGVNDIREIIESVHYRAA 126 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+K+Y+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 127 SARYKIYIIDEVHMLSTSAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRCQRFDLR 186 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 ++ E + L I E AL L+ RAAEGS RDA SL DQAI+ G G+ + Sbjct: 187 RIEPEVMIALLRRIATTEGAQITDDALALITRAAEGSARDATSLLDQAISHGAGETTATQ 246 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V AMLG D + L L + ++ +A + A G + A+L ++ + H +++V+ Sbjct: 247 VRAMLGLADRGRVLDLFDMILRGAAAEALAELQAQYADGADPMAVLRDLAEITHWVSIVK 306 Query: 297 LSPAALGNDM--AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 ++P AL + R + +A +P + +Q LL E+ AP+ M EM ++ Sbjct: 307 ITPEALDDPTIGPDERARGQAIAEKVPMRALTRLWQMLLKALDEVGQAPNAMMAAEMAII 366 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQ-QAPTVPL 405 R L +P PE + + + A + ++ P+ AP P+ Sbjct: 367 R-LTHVADLPDPETLIRKVQASAAAGEFSRNAAPSAARGEAPPRAAAPRTPV 417 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 145/412 (35%), Positives = 224/412 (54%), Gaps = 4/412 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ FAD+VGQEH+ L+ ++ G+I HAYLF+G RG GKTS A++LA+ Sbjct: 1 MAYVALYRRWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPCG CD+CR I G +D+ EIDAAS +++ RDL ++V++AP G + Sbjct: 61 ALNCAEGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTEGLY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML+ +FNALLKTLEEPPE V F+LATT+P K+P TI SRC ++ + V Sbjct: 121 KIYIIDEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRYDFHRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +L ++ E I E AL ++A A+G +RDALS+ DQ A +G ++ + V Sbjct: 181 TEICDRLIYVCKESGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEGTLTAERVQEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + E + + ++ +++ G E +LVE+ + + + Sbjct: 241 LGLVGRAWIRQMAEQIAARDAAALITQLSQLLQNGRELRQVLVELAQYFRSLMIAGVGGT 300 Query: 301 ALGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 ++ A ++R A +I + L ++L +P R+ E L+ Sbjct: 301 ISAAELCAGDAEQLRADAAQFSEDEIMTILRRLNETMQDLRTSPQPRIAAETLLIELCHA 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 P A A A + + + +A A +V P + + Sbjct: 361 DGAAVSVGAAAPHPGSADAAHIARL---EAQVEELAARLAAGSVSAPISAAG 409 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 147/430 (34%), Positives = 240/430 (55%), Gaps = 8/430 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ F +VVGQ H+ + N L R+ HAYLFSG RG GKTS+A+++AK Sbjct: 1 MAYQALYRVYRPQRFDEVVGQAHITRTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C CR I +G D+ EIDAAS V++ R++ D V+Y P+ + Sbjct: 61 AINCEQAPVNEPCNECPTCRAITEGSSPDVFEIDAASNNGVDEIREIRDKVKYPPSEAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TI+SRC +F +K +V Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPAHAIFILATTEPHKIPATIISRCQRFDVKRHEV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ ++++IL+++ I + AL+L+ARAA+G +RDALSL DQA+A +G ++ AV + Sbjct: 181 DQLMERMQYILSDQTIGYTETALRLIARAADGGMRDALSLLDQAVAFSNGDLTDDAVLEV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G ++D+ L++ A+ ++++ + + G + + + +++ +++ SP Sbjct: 241 TGAVEDEALLAVANALQAHQVDQLLQTLEKMQRAGKDLKRFVEDLVFFYRDTLLLKTSPT 300 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-A 358 A+ + A + TI + L ++++ R+ VE+ ++ Sbjct: 301 AVDLLERARPTEAFKTFVETIETEACFHIIEQLHDCQQQMRLTNHPRVLVEIAFIQIAEQ 360 Query: 359 FHPRMPLP-----EPEVPRQSFAPVAPTAVMTPTQVP-PQPQSAPQQAPTVPLPETTSQV 412 + E ++ + T V P QP Q PTV + + + Sbjct: 361 GRTTGQIMQSLQQEVRELKEQMHQLKVTGVPAAEGTPAQQPAKRKQARPTVRIAKERIRQ 420 Query: 413 LAARQQLQRV 422 + +R + ++ Sbjct: 421 MLSRAEKAQL 430 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 149/435 (34%), Positives = 223/435 (51%), Gaps = 5/435 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RKWRP F DVV QEHV+ + N + GRI HAYLF GTRG GKT++A++ A+ Sbjct: 1 MSYTALYRKWRPLVFEDVVEQEHVVRTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I +D++EIDAAS V++ R++ D V YAP++ R+ Sbjct: 61 AINCINPKDGNPCNECEVCRGILDESILDVVEIDAASNNSVDNVREIRDEVVYAPSQARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP HV F+LATTDP KLP TILSRC +F K + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPGHVVFILATTDPHKLPATILSRCQRFDFKKITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +++ I I + L+AR A+G+LRDALS+ DQ IA G ++ Q V Sbjct: 181 AGIAERVKLIAQASGINIDDDGALLIARLADGALRDALSILDQCIAEGSTTITYQNVLDA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 +G + DD +V+ + N E ++A + +A G + +++ + + +LS Sbjct: 241 IGIVSDDFISEIVDNIESKNVEGLVASVEMLSAEGRDILRFASDLVLYFRNLLICKLSKN 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P + + +M + + + L +L YA ++R+ +E+ L+ Sbjct: 301 PENILDVGKQYLDKMIAQSEAFTKERLIGIIKELSSFETQLKYALNQRVFLEVMLISISV 360 Query: 359 FHPRMPLPEPEVPRQSF---APVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 + + + + V A V + + Q P + + L Sbjct: 361 GSYGQSGSDNNLLDRITNLESAVRTGATALGPSVKDRSSVSVQVNVANTSPVPSGKKLDN 420 Query: 416 RQQLQRVQGATKAKK 430 + + K Sbjct: 421 LPPIPGSSVPKSSAK 435 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 178/597 (29%), Positives = 273/597 (45%), Gaps = 23/597 (3%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQ F DVVGQEH+ L N + ++ HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQVFGDVVGQEHIERTLKNAIEQDKVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T+ P G C C+EI +G D+ E+DAASRT VE+ R+ ++ V +AP RG+ K+ Sbjct: 63 CEKGPTSEPDGSCRECQEIAEGVHPDVYELDAASRTGVENVREEIIGRVNFAPTRGKAKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDPQK+P TI SRC +F L E+ Sbjct: 123 YIIDEVHMLSIAAFNALLKTLEEPPAHVVFILCTTDPQKVPETIHSRCQRFDFHRLSNEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E++ E AL L+A A+G +R+AL+ +Q IA G+G+V+ +LG Sbjct: 183 IVSRLGAVCVAENVEFEGEALDLIAHRADGGMRNALTALEQLIAFGEGKVTVAGAEDLLG 242 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +LD ++ A+ + + + G + +M + + ++ L+ Sbjct: 243 SLDSSDLAEIMAAVGVRDAAACFSWVASYVETGADLAQFTRDMAQQVRNLYVMSLAGTDA 302 Query: 303 GNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 D+ E R + + P + L EL A ++R+ E+ L R + Sbjct: 303 ALDVTDAERRELASELKLFGPNRLTHLLSILGELSSELRTASNQRLAFEIALTRMIRPES 362 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 + L ++ + P Q ++ Q +P S + Q Sbjct: 363 DLTLEALAARIETLEEQLAQSKQPAQSTPSQREAVAQSESAAGIPVQASAHVPPVGASQP 422 Query: 422 VQGATKAKKSEPAAATRAR--PVNNAALERLASVTDRVQAR-PVPSALEKAPAKKEAYRW 478 Q PAA + A P A + V VQA P + + Sbjct: 423 AQPVPVVVPQSPAATSVAAANPSTPAVSQTSVPVQGAVQASMPASQSSATTATQSPTPAT 482 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV-E 537 ++ +PV+Q V T E A ++ A + W VS + K+ Sbjct: 483 QSNSPVVQPTASVETAAG-----------ETAEIISNPAALQRVWRQVVSIVKREKVSYG 531 Query: 538 QVALN-AWKEESDNAVCLHLRS-----SQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 + +N + + ++ L + ++ L A G + L + Sbjct: 532 VLLVNASVQVQAGGQGVAILFPADNPLAFSMAQKPEVKEVLEGAFRQAIGKDIPLAL 588 >UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunits n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455DA Length = 676 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 187/667 (28%), Positives = 290/667 (43%), Gaps = 40/667 (5%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SYQV ARK+RP+TF DV+GQ+HV+ L N ++ R+ HAYLF G RG GKTS AR+ AK Sbjct: 16 SYQVFARKYRPRTFEDVLGQDHVVRTLRNAIAQNRLAHAYLFVGPRGTGKTSTARIFAKA 75 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC G + C EIE+G +D+ EID AS VE R+L + V++AP R R+K Sbjct: 76 LNCPNGPRVDFDPDDEVCVEIEKGISLDVREIDGASNNGVEQVRELREEVKFAPTRCRYK 135 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y IDEVHMLS +FNALLKTLEEPPEHVKF+ ATT+ K+ TI+SRC +F L+ + Sbjct: 136 IYYIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEAHKVLPTIISRCQRFDLRRIPAG 195 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I L HI E +A +A +A+ AEG +RDA S+ DQ +A ++ Q V + Sbjct: 196 LIAKHLLHIATLEKVALSEKAAYAIAKGAEGGMRDAQSMLDQLVAFCGERIEEQDVLDIF 255 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + +L +++ + + ++ A G + LL +++ + + Q+ PAA Sbjct: 256 GFTRGETVANLAARVLDRDTVGALKELHSQADTGKDLGRLLTDLIQHFRTLLVHQVDPAA 315 Query: 302 LGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 D+ + +R+ + + + L + +A ++ + +E+ +++A+ Sbjct: 316 AEEDLSPEVADMVRQQSAMVQAESLLRVMDGLAEVDARMRWASNKLLHLEIGVIQAVQTL 375 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + L E + AP ++ PP P A +AP P +AA Sbjct: 376 GEVTLSE-VIEALGGAP--SPDLIARRAAPPVPSRAVVEAPAAERPRPAPVAVAAPTP-- 430 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA--PAKKEAYRW 478 +PAAA P AL R + PA Sbjct: 431 ---APVSLSTPKPAAAPVVEPAPLPALFREEPPPQAPVPPLFRDEPPQTDRPAPVAVAPT 487 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 V + P A A + AA + W + + ++ Sbjct: 488 PPPVAVPAEVPPAVEPAAPTPAPAPVAEAPTSPPAAAGGTPEEQWRQIKDRFRIKSPLKA 547 Query: 539 --VALNAWKEESDNAVCLHL-RSSQRH---LNNRGAQQKLAEALSMLKGSTVELTIVED- 591 + + A++ + + + S H L ++ L E +S + G + L I D Sbjct: 548 DYLDVAAFQSCEGKTLRIGMPTSEAGHRDALLYAPVRKALEEIMSDVIGRPMMLEINLDP 607 Query: 592 --DNPAVRTPL----------------EWRQAIYEEKLAQAR----ESIIADNNIQTLRR 629 + P + P+ + E K A+ E D IQ Sbjct: 608 SMEPPPMAEPMFTFSDPEPAPAKAPAAPKPEPKAEAKSEAAKPAINEDFYNDPLIQEALV 667 Query: 630 FFDAELD 636 F A L Sbjct: 668 KFKATLV 674 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 183/613 (29%), Positives = 284/613 (46%), Gaps = 16/613 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ + L RK+RPQTF DVVGQ HV L N L + HAYLF G RG GKT++ARLLAK Sbjct: 1 MA-EALYRKYRPQTFDDVVGQTHVERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAK 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGR 119 L CE G T +P G C+ C+ I +G D+ E+DAASRT V++ R+ ++ VQ+AP RGR Sbjct: 60 ALLCEHGPTPSPDGTCEECQLIAEGAHPDVNELDAASRTGVDNVREEIIGRVQFAPTRGR 119 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHML+ +FNALLKTLEEPP HV F++ TTDPQK+P TILSRC +F L Sbjct: 120 YKIYIIDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTDPQKIPETILSRCQRFDFHRLS 179 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 E+I +L + E + E AL L+AR A+G +RDAL+ +Q IA G G V+ +A Sbjct: 180 NEEIVSRLGAVCMAEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAGNVTMDVANA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG+LD + + + + + E G + ++ + + + L+ Sbjct: 240 ALGSLDVNDMSEIAGHIGRRDAAACFTWMAEYVETGADLAQFARDLASYVRDMYVFSLTD 299 Query: 300 AALG--NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A+G + ++ + ++ E A+ + L L + + R+ E+ L R + Sbjct: 300 GAVGLSSASSSNQQQLAEDAKLYGTDRLAYILDVLGDLNTSLRSSTNPRLSFEIALTRMV 359 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET-TSQVLAAR 416 + L + + +AP A Q + A+ Sbjct: 360 RPQSDLTLEALAARIEVLEKALASGQFAAPAGTTPAAAAPVPASVPASQSGYAGQAVPAK 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 V ++A+++ A + Q RP+ + + +A Sbjct: 420 PARDEVPAPSRAQEAAARMRAARSQQAAPQPRPQAQPAPQAQPRPMAQPQAQPAPQAQAT 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS----- 531 A P +Q + + +LAAKL A + W A V+++ Sbjct: 480 PQPAVQPQVQARPASQAQPRPQAPAAAAAPADLAAKLTNPAALQRGWQAAVAEVKRERSI 539 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNN----RGAQQKLAEALSMLKGSTVELT 587 L+ ++ N E +A+ + S N + +A AL G V Sbjct: 540 YGALL--MSANVVSEVDGSAMRIEFSSENTMAFNMVQKPDVTETIASALGHAFGMQVPFK 597 Query: 588 IVEDDNPAVRTPL 600 IV++++ A P Sbjct: 598 IVQNESMAPVAPA 610 >UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGG2_9ACTN Length = 862 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 177/599 (29%), Positives = 267/599 (44%), Gaps = 12/599 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQTF DVVGQ H+ + N L R+ HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQTFDDVVGQIHIERTIKNALESDRVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T P G C+ C I +G D+ E+DAASRT VE+ R+ ++ VQ+AP RGR+K+ Sbjct: 63 CEKGPTPAPDGECEQCLAIAEGTHPDVNEMDAASRTGVENVREEIIGRVQFAPVRGRYKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDP K+P TI SRC +F L E+ Sbjct: 123 YIIDEVHMLSTAAFNALLKTLEEPPSHVVFILCTTDPHKVPATIHSRCQRFDFHRLANEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E + E AL+L A+ A+G +RDAL+ +Q IA G+G+V+ Q +LG Sbjct: 183 IIARLGAVCASEGVEFEAEALELAAKRAQGGMRDALTTLEQLIAFGEGRVTMQVALDVLG 242 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 LD + +V + + + E G + ++ + + L+ AL Sbjct: 243 ALDSNDMTDIVARIARRDAAACFTWVAEYVETGADLAQFARDLASYVRDLYAFILTDGAL 302 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 +A ++ A P + L EL + + R+ E+ L R Sbjct: 303 EPRSSATNEQLAAQAGLFGPDRLAHVLSILGDVCAELRSSANPRLSFEIALTRMARPESD 362 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 + L + + ++ + +V + A + Sbjct: 363 LTLASLAARVEELERACAQGARPVDAPAVRVAASMFDSTSVADVPMAASAAADAPSASGL 422 Query: 423 QGA--TKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A+ + A + PV + A+ +A + + A + Sbjct: 423 SPSVIAAARAIKGGGAPSSVPVVDTGAPASAASDASGSDASSGAAAVASAERIPAVQ-SG 481 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELA-AKLAAEAIERDPWAAQVSQLS-LPKLVEQ 538 + K A + E AKL+ A + W A V+++ L Sbjct: 482 LDSSPAPAADSPSASEPKLAFSSAEPSEAVRAKLSNPAALQRGWQAAVAEVKNLRTAYGA 541 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQK------LAEALSMLKGSTVELTIVED 591 + L+A A L + S + A QK ++ AL+ G V + Sbjct: 542 LLLSASVSPVQGASGLAVEFSHENSFAFSAVQKPEVSEMVSAALAHAFGGEVPFEFTQG 600 >UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacteria RepID=DPO3X_BUCAP Length = 363 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 182/359 (50%), Positives = 259/359 (72%), Gaps = 1/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ+LARKWRPQ+F ++GQ++++ A++NG SLG+IHHA+L SGTRGVGKT+IARL+AK Sbjct: 1 MNYQILARKWRPQSFKKIIGQKYIVKAISNGFSLGKIHHAWLLSGTRGVGKTTIARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC C C+EIE+G +D IEIDAASRTKVE+ R++LDN+ Y P++ RF Sbjct: 61 SLNCEIGITSLPCRKCTICQEIEKGICLDFIEIDAASRTKVEEIREILDNIYYTPSKSRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP+H+KF+LATTD +K+P TI SRCL F L L Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPQHIKFILATTDVEKIPKTIRSRCLHFKLNILSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I + L+HIL + + AL++++ A GS+RDAL+L + A+ ++ + + M Sbjct: 181 EDIFNFLKHILKKGGNNFDEEALKIISDYANGSMRDALNLLEHAMHLSKNNINLKNTTEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + A L + ++E + +++M L+N+ + G+EW+ +L+EM+ LH IAM++ P Sbjct: 241 LGIPNKKHAFLLTKFLLEQDSKKMMCLLNKISKIGLEWQNILIEMMRFLHHIAMLKSYPK 300 Query: 301 ALGND-MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + E ++++A +IQL Y+ LL GRKEL ++P+ +MGVEM LL+A+ Sbjct: 301 IWNQIFIKNNENEIKKIAENNSKYNIQLCYKILLKGRKELFFSPNHKMGVEMILLQAIT 359 >UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 Tax=Roseiflexus RepID=A7NLI5_ROSCS Length = 644 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 196/649 (30%), Positives = 302/649 (46%), Gaps = 25/649 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L R++R QTF +++GQEHV+ L N ++ GR+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MTVQALYRRYRSQTFDELIGQEHVVRTLRNAIAEGRVAHAYLFTGPRGVGKTTVARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PCGVC++CR I +GR VD+IE+DAAS T VED R++++ VQ+ PA R Sbjct: 61 AVNCTAPPAERPCGVCESCRSIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPAVART 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+ K+P TILSRC +F V Sbjct: 121 KVYIIDEVHMLSTAAFNALLKTLEEPPPHALFILATTEVHKVPATILSRCQRFVFNRHTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I +E + EP A + +ARAA GS+RDALS+ DQ +A G G VS + V + Sbjct: 181 ASIAAHLRMIATQEGVTLEPGAAEAIARAATGSMRDALSVLDQLMAYGGGTVSLEQVRNL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + +LV+A++ A+ + ++ + AA G + +++ L + ++ Sbjct: 241 LGASEMQEVTTLVDALIAADLPGALRVVADVAAAGADLRQFTRDLVERLRALMLICAGAD 300 Query: 301 ALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D+A E ++ ART+ D+ + + +L + ++ +E+ ++ A+ Sbjct: 301 RSLLDVAEEEAAQIERQARTVSLGDLMRWVKLFSELDYQLRISSYGQLPLELAVIEAVIA 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + P + QPQ AP Q T P + T + Sbjct: 361 SAPAATAAQSTVPATPPRPSARPTTAPARDAAQPQRAPAQPTTAPAHDRTPPQPPPARAA 420 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + P A R + A A +AP +A + Sbjct: 421 PAHNAEPPQRDLAPPATVPVRDDMPPVPTIRRAGATGTAAASPVDAAREAPG--DAPQAS 478 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPE-------LAAKLAAEAIERDPWAAQVSQLSL 532 A P + + ++A + E A A W+A V + + Sbjct: 479 ARQPDSTGDPFIRHQEQTRRASNPGISTESGEGVAAANADAVALERIEGIWSAVVRDVRV 538 Query: 533 PKLVEQVALNAWKEE---SDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELT 587 Q LN+ DN + L + S + +Q + E LS G+ + Sbjct: 539 HNKTLQALLNSGARPVDVKDNILVLEVPSEWLMNQIEKPAMRQIVEEVLSKHMGARFAIR 598 Query: 588 IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + P R+ I + D ++ FDA++ Sbjct: 599 CAV-ETQRRENPGALREQIRASR---------KDPLVRAALNIFDADII 637 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 180/576 (31%), Positives = 262/576 (45%), Gaps = 34/576 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WR Q F D+VGQ+ V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MAYQALYRVWRSQRFEDIVGQKAVTQTLKNAIVSHKTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G D+IEIDAAS VE+ R + D YAP + + Sbjct: 61 AINCPNSKDGEPCNECEMCRSITAGTQEDVIEIDAASNNGVEEIRFIRDRANYAPTKAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEP E V F+LATT+P K+P TI+SR +F K ++ Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPKESVIFILATTEPHKIPATIISRTQRFDFKRINT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL E I +EP AL ++AR+AEG +RDALS+ DQAI+ +G ++ + Sbjct: 181 ADIVEHLEFILKESTINYEPAALNVIARSAEGGMRDALSILDQAISFSEGTITLDDAMQV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G+L D+ S + A V+ + +N+ A G E L +ML + M Q +P Sbjct: 241 TGSLTDEMMDSYLSACVKKEVPEALEALNQILAAGKESRRFLEDMLQYCRDLLMYQQAPN 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + I ELA+T+ + + L + E+ + + +E+ ++ Sbjct: 301 LVEEQSSTIRSTFTELAQTVSADQLFSMIKILSDTQNEIRFTNSAAIYLEVATVKLAQL- 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P A Q QQ E Sbjct: 360 ----------------PSASVPSAKMALADDQIVKQLQQEIKELRNEIKELRSNTGTVNT 403 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +VQ + + + R + R A+ Q + V L + + + KA Sbjct: 404 KVQPVQQTNHKKQTSTYRVPTERVYKVLREATRQHLNQVKEVWEDLLMSLSVTQRAMLKA 463 Query: 481 TTPVMQQK---------EVVATPKALKKALE---HEKTPELAAKLAAEA--IERDPWAAQ 526 + PV E+V A + L+ H + A + I R+ W Sbjct: 464 SEPVAAGPTGLVIAFDYEIVCQRAANDEELQLSVHNNLSRMIKDYAPDPVYITRESWPEL 523 Query: 527 VSQLSLPKLVEQVALNAWK-EESDNAVCLHLRSSQR 561 L + E+ A N++ EES+ + L L Q Sbjct: 524 RKN-YLTQAQEEGAENSFASEESEGEIEL-LPQEQE 557 >UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=cellular organisms RepID=B2GFF0_KOCRD Length = 1264 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 151/515 (29%), Positives = 236/515 (45%), Gaps = 13/515 (2%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L R++RP+TF DV+GQEHV L L R++HAYLFSG RG GKT+ AR+LA+ LNC Sbjct: 4 ALYRRYRPETFEDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNC 63 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G TATPCG C++CR++ + +D+IE+DAAS V+ RDL + +AP R R+K+ Sbjct: 64 AEGPTATPCGRCESCRDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDRYKI 123 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM++R FNALLK +EEPPEHVKF+ ATT+P K+ TI SR + + + E Sbjct: 124 FIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVPPEP 183 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAML 241 + LE + EE ++ EP L L+ RA GS+RD+LS+ DQ +A D + +S A+L Sbjct: 184 LMRYLEQLCQEEGVSTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDERGISYDLAVALL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G +V+A + V + ++ G + + ++L + +V P + Sbjct: 244 GYTHAALLDDVVDAFAAGDAATVFSSVDRVVQTGQDPRRFVEDLLERFRDLVVVNAVPDS 303 Query: 302 LGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 N + R+R A + ++ E+ A ++ +E+ R L Sbjct: 304 AANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGATSPQLHLELLCARIL 363 Query: 358 AFHPR-----MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 + + R+ P +PP P +A P P + Sbjct: 364 LPSADDTTRGITSRVDRLERRLSIPRGAGIRPGGPSIPPAPGAADGVDPAAPHAPGADAM 423 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARP-VNNAALERLASVTDRVQARPVPSALEKAPA 471 + + A + + R A T + +P + P Sbjct: 424 APVAPDSPSSDASAAPAREAADPAPSGPVRQDGSQPGRSALTTPDIAEPSIPEDEAENPR 483 Query: 472 KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKT 506 + P ++ P A EH+ Sbjct: 484 GSDHPAAGDPVPQGERGPQGNHPPADGTTTEHDAA 518 >UniRef50_Q9RKL5 DNA polymerase III subunit gamma n=10 Tax=Streptomyces RepID=Q9RKL5_STRCO Length = 784 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 137/364 (37%), Positives = 208/364 (57%), Gaps = 7/364 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L R++RP++FA+V+GQ HV L L R++HAYLFSG RG GKT+ AR+LA+ Sbjct: 1 MSSLALYRRYRPESFAEVIGQGHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T TPCG C +CR++ + +D+IEIDAAS V+D RDL + + PA Sbjct: 61 CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+K+Y+IDE HM+S FNALLK +EEPPEH+KF+ ATT+P+K+ TI SR + + + Sbjct: 121 RYKIYIIDEAHMVSPQGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAV 237 +R L + E IA E L L+ RA GS+RD++S+ DQ +A +G V+ Sbjct: 181 PPGTLRDYLAEVCGREGIAVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGAGADGVTYDMT 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +++LG D S+VE+ V +G +++ G + + ++L L + ++ Sbjct: 241 TSLLGYTDGSLLDSVVESFVSGDGSAAFGVVDHVIEGGHDPRRFVTDLLERLRDLVILAA 300 Query: 298 SPAALGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A + A + RM+E AR+ ++ + G E+ A R+ +E+ Sbjct: 301 VPDAAEKGLIDAPADVVERMQEQARSFGAAELSRAADIVNEGLTEMRGAHSPRLQLELIC 360 Query: 354 LRAL 357 R + Sbjct: 361 ARVM 364 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 1/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP +F D+VGQ V L++ +S GRI HAYLFSG RG GKTS A++LAK Sbjct: 28 MAYIALYRQWRPGSFKDLVGQTAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAKILAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVC NC +I G +D+ EIDAAS +++ RDL + V++ PA GR+ Sbjct: 88 SLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREKVKFTPAEGRY 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TI SRC +F + + V Sbjct: 148 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHKVPATIQSRCQRFDFRRITV 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I +L ++ E I E AL+L+AR A+G +RDALSL DQ + ++ V Sbjct: 208 EEIEARLAYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQCASLDGDTLTAACVEEN 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + L +A+ E V+ I E A G + LL E+ L + + + + A Sbjct: 268 LGLIGHEPIYRLTKAIGERAKGEVLETIAELLALGKDPMQLLAELTIHLRSLMIYEAAGA 327 Query: 301 ALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 ++A + E I L EL + P R+ +E+ LL Sbjct: 328 LAALNLADDTGAALEEQKALFTQAQIMAMIARLHEAMAELRWTPQPRITLEVALLSLC 385 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 169/548 (30%), Positives = 270/548 (49%), Gaps = 43/548 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ F D+VGQ+HV L N L ++ HAYLFSG RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPKNFKDMVGQDHVTKTLTNALMQSKVAHAYLFSGPRGTGKTTTAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PC C C I+QG +++ EIDAAS +++ RDL D V+ + ++ Sbjct: 61 ALNCEHREGVEPCNQCAFCLSIDQGSAMEVFEIDAASNRGIDEIRDLRDKVRLSAGESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPE V F+LATT+ K+P+TILSR +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPERVVFILATTEVHKIPLTILSRVQRFEFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ + EP ALQ++A+ +EG LRDALS+ DQ + DG++ + V + Sbjct: 181 EQIHSHLDKVCQTIGRDVEPEALQIIAQKSEGGLRDALSILDQCLLL-DGKLGVEQVYQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + ++ + LV+ ++ + + + + E +G++ ++ E+L + + + S Sbjct: 240 LGMVGEEFSAQLVDHLLTGDYAKALGCLGEGINQGMDPRQIIRELLDYMRQALLY-ASTQ 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA-F 359 A + + + + + + LL G +L YA + R+ E+ L++ + Sbjct: 299 AFPQVAPHLREHLAYQCQKLGLKTLLQWIGILLQGESQLKYAANARLAAELLLVQVIYDS 358 Query: 360 HPRMPLPEPEVP------------------RQSFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 P P+V RQ P V + PP + P+ P Sbjct: 359 QPGYSKESPQVLERLQELEEEIKNLSTGKSRQESKGELPKKVNERSSEPPGHKK-PELPP 417 Query: 402 TVPLPETTSQVLAARQQLQRVQGA--------TKAKKSEPAAATRARPVNNAAL------ 447 P + A +++VQG K KKS A +PV Sbjct: 418 LQDKPAISQGGETAALSIEQVQGRWGDILEQVRKRKKSTHAFLMEGKPVELDGDSLVIVF 477 Query: 448 -ERLASVTDRVQARPVPSALEKA--PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHE 504 E L+ D+V + +E+ + +AYR ++ + + E PK + + + Sbjct: 478 KEGLSFHRDKVNQKENRETIEEVLQSSLGKAYRLQS----LLENEYGKDPKDSEHVEKTK 533 Query: 505 KTPELAAK 512 + P + Sbjct: 534 ENPMIKKA 541 >UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 Tax=Lactobacillales RepID=A5VIC2_LACRD Length = 611 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 135/433 (31%), Positives = 225/433 (51%), Gaps = 1/433 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ F D+VGQ+ V L N + +I HAYLF+G RG GKTS A++ AK Sbjct: 1 MSYQALYRVWRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I G+ D+IEIDAAS VE+ RD+ D +YAP + + Sbjct: 61 AVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P+TI+SR +F + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E +++++IL+++ + ++ +AL ++A AAEG +RDALS+ DQ ++ D +V + Sbjct: 181 EDAFNRMKYILDQKKVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++ + + G + + + G + + + +++ + I + Q SP+ Sbjct: 241 TGSVTKQLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPS 300 Query: 301 ALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + ++ E+ + + L ++E+ + + +E+ ++ Sbjct: 301 LISVESTGLKQEDFEEIVQLASSATLYRMIDELNNIQEEMRFTTHPDVYLEVLTIKLAQI 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P+ L A + Q Q Q +Q P+ + +Q Sbjct: 361 EPQKNLQSAPAVSADTNAEATKTIEKLQQEIQQLQQTVKQLQNTPVRASRPSPRQQNEQP 420 Query: 420 QRVQGATKAKKSE 432 + Q + ++ Sbjct: 421 RVQQKKVQVNLNK 433 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 166/505 (32%), Positives = 263/505 (52%), Gaps = 30/505 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQTFAD+VGQ+ + L N + RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQTFADLVGQDVIAQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLAK 60 Query: 61 GLNCET--GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + T +PCG C+ C I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLSYDHPTPSPCGTCNVCVGITKGSTLDVIEIDAASNTGVDNIRELIERSQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDEVHMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTDPQRVLATIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L HI EE I A+Q++A+ A+G LRDA SL DQ ++ G+++ + V Sbjct: 181 PLEAMVKHLHHIAIEEKIDITTEAIQMIAQIAQGGLRDAESLLDQ-LSLLAGEITVERVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++G + + + LVEA+ N +V+ + RG E +L + G + + + + Sbjct: 240 DLVGAVPERDLMVLVEAIAADNSIKVLKCTRQIMDRGKEPIIVLQNLAGFYRDLLIAKTA 299 Query: 299 PAA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P + L ++ + ++ I + L ++ R+ +E+TLL Sbjct: 300 PTSKNLVALTKPTWEKLCQFSQDWDIGTILAGQKHLQTSEVQIKNTTQPRLWLEVTLLGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L P+A+ Q+ Q Q +V TS+ L+ Sbjct: 360 L----------------------PSALPKFNQLEKQETRDISQNVSVKN---TSKNLSQP 394 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + K + SEP ++ P+ + + S T+ + +LE K E+ Sbjct: 395 LTKKPISEKPKQQISEPKEVSKEVPIAPKSEDFFTSSTNDTAKKSSSDSLETDKIKNESE 454 Query: 477 RWKATTPVMQQKEVVATPKALKKAL 501 V+ + + +T L + + Sbjct: 455 LQNIWEKVLAEVKPHSTQALLSQQV 479 >UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured bacterium URE4 RepID=C0JZX8_9BACT Length = 577 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 166/640 (25%), Positives = 278/640 (43%), Gaps = 75/640 (11%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS Y V ARK+RP +F ++GQ+++ L+N + G++ HAYLF G RGVGKT+ AR+ A Sbjct: 1 MSQYIVSARKYRPDSFETLLGQDNIARTLSNSIKRGQLAHAYLFCGPRGVGKTTTARIFA 60 Query: 60 KGLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC G PCG C++C ++GR + E+DAAS V+D + L++ VQ P G Sbjct: 61 KMINCAHPGPDMEPCGECESCVSFQEGRSYCIHELDAASNNGVDDIKALIEQVQVPPQVG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++ VY+IDEVHMLS+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + Sbjct: 121 KYSVYIIDEVHMLSQSAFNAFLKTLEEPPAHAIFVLATTEKHKILPTILSRCQTYDFNRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + + L I +E I + +L ++A+ A+G++RDAL++ DQ +A + + V Sbjct: 181 GIPDMVRNLRGIAAKEGITIDDESLHVIAQKADGAMRDALTIFDQTVAFCGTDIKYEDVV 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 L LD D + +VE + + ++ +E ++G + + L + + + + Sbjct: 241 RNLNVLDYDYSFGMVENFLSGSYAAALSSFDEILSKGFNALHFVAALSSHLRDLVVARTA 300 Query: 299 P-AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 AL +++ R RE A P + A + R+ +E L++ Sbjct: 301 GLDALLELPDSLKQRYREQAARCPLQFLYDALGVTTACEAGYKAAVNPRLHIEFALMKLS 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 R P+P + PQ AP +P Sbjct: 361 FLTGRTD----------------------VSAAPRPVAVPQAAPVIP------------- 385 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 K S + + P A + +V PVP+ +AP A Sbjct: 386 ---------SEKPSAIPSEAKESPAPAPADKTAVAVA------PVPTRQRRAPKNGSALS 430 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 A ++K P A + A L +A +D W A +++ + Sbjct: 431 MNAIMQEKEEKPEQEAPVAAE------------AALPDDAAVKDGWKALIAKFEARPRLA 478 Query: 538 QVALNAWKEESDN----AVCLHLR-SSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 A S+ +V + ++Q+ + L + + + ++ + DD Sbjct: 479 NALAKAELRMSEEAGVKSVFFSVSNAAQKQWIEEKLLRDLETSFREIL-QSRKVNLHVDD 537 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 P P E + + EEK A++ + ++ Sbjct: 538 IPEEE-PGEKKPYMPEEK---AKDLMDKHPEVRAFVADLG 573 >UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 Tax=Bacteria RepID=D2QBB5_9SPHI Length = 664 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 174/670 (25%), Positives = 286/670 (42%), Gaps = 44/670 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQEH+ T L N + + A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFVVSARKYRPATFDTVVGQEHITTTLKNAIKTNHLASAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC+ C C++C Q ++ E+DAAS VED R+L+D V+Y P G++ Sbjct: 63 INCQNLTAEGEACDACESCVSFNQNASFNIHELDAASNNSVEDIRNLIDQVRYPPQSGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + Sbjct: 123 KIYIIDEVHMLSSAAFNAFLKTLEEPPTYAIFILATTEKHKILPTILSRCQIFDFNRIQP 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTD-QAIASGDGQVSTQAVSA 239 + I + L I +E I E AL L+A+ A+G LRDALS+ D + D + + V Sbjct: 183 QHIANHLAGIAQKEGITAETEALDLIAQKADGGLRDALSMFDLNVTFAADRIIRYKEVLD 242 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 L LD D L + ++ + + ++E +G + +V + + + + Sbjct: 243 NLHILDYDYYFKLTDLLLAGKLPQSLLTVDEILRKGFDGHQFIVGLCRHFRDLLVCK-DA 301 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPY--APDRRMGVEMTLLRAL 357 A + +R + L + + L L G+ ++ Y A D+R+ E+ L++ Sbjct: 302 ATVQLLQVTENVRKQYLDQAMRAPMSFLLSALSLGGQCDMSYKQAKDQRLHTELWLMKLA 361 Query: 358 AFH--------PRMPLPEPEVPRQS--FAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE 407 P +PLP+ P + P Q + AP V Sbjct: 362 NLRNLLNWDAMPELPLPQNGAHSTERFTTPESGDEKKNGEHQPSQSRQAPTSPQLVESHP 421 Query: 408 TTSQVLAARQQLQRVQGATKAKKS--EPAAATRARPVNNAALERLASVTDRVQARPVPSA 465 TS+ + Q A++ + + A+A + A + + RP A Sbjct: 422 ITSEPVNGYQPANGAAAASQPRSNGYAVASAGTLASSPSVAPSSAGTASVTTPTRPALVA 481 Query: 466 LEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKAL-----EHEKTPELAAKLAAEAIE- 519 + R + + L+ + + E + + + A Sbjct: 482 DAVMTQPETTGRPEVRPKPVIAPPQRPATSRLRSTVPLTTGPVQPATEAVSDVISTAPTR 541 Query: 520 ----------RDPWAA--QVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSS-QRHLNNR 566 +D W A ++ Q EQ+ LN + + + L ++ Q Sbjct: 542 PDKAFTFEDLQDVWRAFSKIRQQQNDSASEQLILNREIVLNGTTIHITLDNTLQVGYLTE 601 Query: 567 GAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT 626 + L + L+ S ++L T E ++ IY + + + + Sbjct: 602 VKPELLGYLRAELQNSQIQLE-------HTVTVQEVKKMIYSSQDKYNYLA-EKNPALHE 653 Query: 627 LRRFFDAELD 636 LR+ + E+D Sbjct: 654 LRKVLNLEVD 663 >UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteobacteria RepID=Q1NUY3_9DELT Length = 706 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 155/498 (31%), Positives = 242/498 (48%), Gaps = 8/498 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+TFA+VVGQ V+ L N L L R+ HA LF+G RGVGKT++ARL+AK Sbjct: 1 MSYLVLARKWRPRTFAEVVGQRPVVRTLQNALRLQRVAHAMLFAGVRGVGKTTLARLMAK 60 Query: 61 GLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC+ + PC C +C+EI G VDL EID AS +++ R+L +N+++ P Sbjct: 61 ALNCQEPEPASRPCNQCKSCQEINAGAAVDLHEIDGASNRGIQEIRELKENIRFLPVSAS 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+ +IDEVHML+ +FNALLKTLEEPP HV F+ ATT+ K+P+TILSRC ++ L + Sbjct: 121 YKIVIIDEVHMLTTEAFNALLKTLEEPPAHVYFMFATTELHKIPITILSRCQRYELTRVA 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ + E + AL +++R A+GS+RD LSL DQ + DG + V Sbjct: 181 YDELLAFFRQVAAREEVTISEAALAMISREADGSVRDGLSLLDQVFSFADGGIDDDDVRQ 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D L A++ R + + + G+ + ++L + + + + Sbjct: 241 LLGLVDRRVFAQLARALLAGELGRALEIFDRGQRAGMNLKRFAADLLDYFRNLVVCRATA 300 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A L + + E+A P + + LL G +E+ YA ++ +EMT++RA+ Sbjct: 301 GARQLLELGEQELVELEEIAAAHSPETLLYCFNLLLKGIEEMQYASRPKLVLEMTMVRAV 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 +P E P P+P + + +T + + Sbjct: 361 EAGQIVPTAEALGRLDQLLAGLPAEEQIAVAATPRPTARGEGKAAPGGGDTAVEAYQKPE 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 + A A EP A L + + A P + P + Sbjct: 421 -----EAAVTAGIGEPEPALAVSDHGAPHLAAIEPAHVPMYASPSRLPQDAVPRDRLPRG 475 Query: 478 WKATTPVMQQKEVVATPK 495 + P+ P+ Sbjct: 476 SRDQLPLAGVATDPGEPE 493 >UniRef50_B5ZIA7 DNA polymerase III, subunits gamma and tau n=10 Tax=Acetobacteraceae RepID=B5ZIA7_GLUDA Length = 687 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 173/434 (39%), Positives = 249/434 (57%), Gaps = 23/434 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RP T D++GQ+ + L N +LGR+ HA++ +G RGVGKT+ AR++A+ L Sbjct: 57 YRVLARKYRPTTLDDLIGQDSTVRILRNAFALGRVAHAFMLTGVRGVGKTTTARIIARAL 116 Query: 63 NCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC G TA PCGVC NC I R D++E+DAASRT V+D R++++ ++ P + Sbjct: 117 NCVGPDGTGGPTADPCGVCANCVAILADRHPDVLEMDAASRTGVDDVREIIEATRFRPMQ 176 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 GR KV++IDEVHMLSR++FNALLKTLEEPP V F+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 177 GRMKVFIIDEVHMLSRNAFNALLKTLEEPPAQVTFVFATTELRKVPVTVLSRCQRFDLRR 236 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD------GQ 231 + + I E P AL L+ARAA+GS+RD LSL DQAIA G Sbjct: 237 VPQSDLAAHFGRIARAEGAECTPDALALIARAADGSVRDGLSLLDQAIAQGSVEGDGAAP 296 Query: 232 VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 + + V+ MLG D + L+EA++ +R +A+ +EA ARG + +L ++L L+H Sbjct: 297 IGAERVADMLGLADRGRVFDLLEAVLAGQPDRALAITDEAHARGADLGVMLGDVLELVHT 356 Query: 292 IAMVQLSPAAL--GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGV 349 ++ ++ PA + A R LA + + +Q LL G E+ APDRR Sbjct: 357 VSRLKAVPALRQSADLPEAERERGGALADRLSVPVLGRTWQMLLKGLSEVEMAPDRREAA 416 Query: 350 EMTLLRALAFHPRMPLPEPEVPR-----QSFAPVAPTAVMTPTQVPPQPQSAPQQA---- 400 EM L+R L + +P P V R ++ + P Q Q SA + Sbjct: 417 EMILIR-LCYVADLPPPGDLVRRLTEGGETGGSGSGALSGGPAQGTSQGTSASGLSVPGR 475 Query: 401 PTVPLPETTSQVLA 414 P P + QV+A Sbjct: 476 PVSGNPVSGGQVMA 489 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 143/443 (32%), Positives = 231/443 (52%), Gaps = 27/443 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V ARK+RP TF VVGQ + T L N + G++ HAYLF G RGVGKT+ AR+ AK + Sbjct: 4 YIVSARKYRPMTFDSVVGQSALTTTLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFAKAI 63 Query: 63 NCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NCE C C++CR + R ++ E+DAAS V+ + L++ + P G++K Sbjct: 64 NCEHPREDGEACNECESCRAFNEQRSYNIFELDAASNNGVDQIKVLMEQTRIPPQVGKYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 V++IDEVHMLS +FNA LKTLEEPP+HV F+LATT+ K+ TILSRC + + + V Sbjct: 124 VFIIDEVHMLSTAAFNAFLKTLEEPPQHVIFILATTEKHKILPTILSRCQIYDFERMTVA 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L+ + +E I +E +AL ++A A+G +RDALS+ DQA + G ++ Q V L Sbjct: 184 NTINHLKMVAEKEGIQYEEQALAVIAEKADGGMRDALSIFDQAASFCMGNITYQKVIEDL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 LD D LV+ +E +M ++ RG + ++ + + + M + P Sbjct: 244 NVLDSDNYFRLVDLALENKVAEMMVTLDGILNRGFDGGNMIQGLAQHVRNVMMAK-DPQT 302 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPY--APDRRMGVEMTLLRALAF 359 L + + + + A+ LY L+ + ++ Y + ++R+ VE+TL++ Sbjct: 303 LPLLETSDDQKAKFQAQAQKAPTPFLYKALELMNQCDIHYRASSNKRLLVELTLIQI--- 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 ++ PE + P+A TP ++ Q Q+ LA++ Sbjct: 360 -GQITQPEDQD--------VPSAGRTPNRLKSLFQKLLAQS-----------KLASQGAG 399 Query: 420 QRVQGATKAKKSEPAAATRARPV 442 G+++ + S+P A+ Sbjct: 400 SEPSGSSENRSSQPGASAATATA 422 >UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Tax=Alphaproteobacteria RepID=C6ABP2_BARGA Length = 646 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 180/645 (27%), Positives = 297/645 (46%), Gaps = 48/645 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGVCDN----CREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V D+ C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDSLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G V+ AV Sbjct: 189 IESKALSAHLRQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVNAIAV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFIMKGDVVNALHELRSQYEAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPILSRNWQMLLKGLQEVNQTARPLQAAEMLLIR 368 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE--TTSQVL 413 LA +P + + + + T + Q + + E +S V Sbjct: 369 -LAHTADLPTLDEALKKLTQ---EKTPLTLVKNSSHQESTNANNITKETMVEAHASSSVS 424 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 ++ + K + + VT+ ++ EK+ Sbjct: 425 NTLPDQSDLKTSLKNQLDHSLQPENLVKNQTPDKINVQEVTETLENSQSIDLSEKSANLS 484 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 + Q E + PK L H+ A Sbjct: 485 RSVT--------QTTEKITQPKTLVINSLHDIVQLAEQHNDA---------------PFK 521 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 L+++ E + L L + ++K+++ + TI + Sbjct: 522 LLIKEFVHPVSFEA--GHITLRLSENTPQFLAHDIEKKISQW------TEKRWTITFVNE 573 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDE 637 T E AI + + A D +I + F +A++ + Sbjct: 574 GGGPTLQEESIAIQKTLFSNA----ETDPDIAKILNHFPEAKIVD 614 >UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Bacteroidales RepID=A6LDQ5_PARD8 Length = 586 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 197/347 (56%), Gaps = 2/347 (0%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ+ + T L N + ++ HAYLF G RGVGKTS AR+ AK Sbjct: 3 NYIVSARKYRPSTFRSVVGQKSLTTTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC C C++CR + R ++ E+DAAS V+D R L+D V+ P G++ Sbjct: 63 INCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPPIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDEVHML+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + + Sbjct: 123 KVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTEKHKVLPTILSRCQIYDFSRISI 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+++ ++E + EP AL ++A+ A+G +RDALS+ DQ ++ +G ++ QAV Sbjct: 183 ADMVEHLQYVSSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGNITYQAVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L +A++ N + ++NE +G + + ++ + G + + + Sbjct: 243 LNVLDYEYYFRLTDAILSGNVRASLLILNEILGKGFDGQNIITGLAGHFRDLLVCRDEST 302 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR 346 + A+I R +E+A+ P + + + ++R Sbjct: 303 LVLFEVGASIRERYKEMAKHCPDQLLFKAIELANTCDLNYRASRNKR 349 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 143/402 (35%), Positives = 220/402 (54%), Gaps = 13/402 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP F++++GQ H+ + N L L + HAY+F+G RG GKT+IA+L+A L Sbjct: 2 YQALYRKYRPTNFSELIGQNHIKQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIATSL 61 Query: 63 NCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NCE+ PC C C+ I D++EIDAAS VE R++ + V YAP G++K Sbjct: 62 NCESLNNEGEPCNECSQCKAIRGNSHADVLEIDAASNNGVEQIREIREQVAYAPGTGKYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHMLS +FNALLKTLEEPP+HV F+LATTD K+P TI+SRC +F + + Sbjct: 122 VYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTDVHKIPATIISRCQRFDFRRIGPR 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAM 240 I +L H+ +E + E ALQLL A+G +RDALSL DQ IA + ++ VS + Sbjct: 182 DIIERLRHVAIKEEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFATNETITKDDVSEV 241 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + ++ + + +++ N ++ LIN+ G E LL +++G L + + + Sbjct: 242 VGRISIEKIEACIGDLLKGNTIEILNLINQVILNGKEPIYLLEDLIGYLRDLVISKAFEV 301 Query: 301 ALGNDMAAI-ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL----- 354 N AI + EL +Q+ + L + E+ ++ + ++ +E+ L+ Sbjct: 302 KEDNITTAILNSKFYELLEEGEIHKMQMMIRKLTEVKNEMKFSNNAQVSLEVGLIQLATE 361 Query: 355 -----RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP 391 R + + E+ PV P + Q P Sbjct: 362 AQEENRLIKKINELEKRVRELTSSGSVPVRPKSFSPTVQQPA 403 >UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Tax=Rhodopirellula baltica RepID=Q7UQ66_RHOBA Length = 676 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 291/648 (44%), Gaps = 27/648 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY V+AR++RP+ F +VGQ+HV AL + R+ HAYLF+G RGVGKTS AR+ AK Sbjct: 36 SYVVVARRYRPRDFTQLVGQDHVARALQGAIETSRVGHAYLFTGARGVGKTSTARIFAKA 95 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LN G TA P D + I+ G VD+IEID AS +++ R L NV P+R R+K Sbjct: 96 LNHPDGPTANPDSESDVAQAIDSGEDVDVIEIDGASNRGIDEIRSLRANVGVRPSRSRYK 155 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHML+ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F ++ + Sbjct: 156 IYIIDEVHMLTGAAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFAPVESD 215 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I +L I+ E E AL+LLAR A GS+RD+ SL +Q ++ DG ++ V ML Sbjct: 216 KIVQRLREIVEAEDNTVEDEALELLARRAAGSMRDSQSLLEQVLSFSDGHLTADHVHTML 275 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 GT DD + L EAM + + ++ I+EA A G++ L +MLG + V + A Sbjct: 276 GTADDQRLHRLAEAMADRDASAALSQIDEAIAAGVDAGRLAEQMLGYFRDLMAVAVGCEA 335 Query: 302 LGNDMAAIEL--RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AA + + ELA + + + ++ R+ +E T+++ Sbjct: 336 SLMRYAAASMHGSLGELAGRWGLQTVLAIVGLVDETLVRIRHSVHARVLLEATVIQVCHL 395 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + + PT +P +++ A Sbjct: 396 PDLQAISDLTAAASGAGGGKSAGEKKKRVAVASSSPSSAAMPTSAVPSSSTSPAAGSDAK 455 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 RV AA + V PV S A + + A + + Sbjct: 456 VRVDSPAAPSGDHRAATSATASVAAGVP---------SGTPPVNSGSTAATSSQPAPQSQ 506 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAA-----KLAAEAIERDPWAAQVSQLSLPK 534 A P VATP + A E L + W+ + ++ Sbjct: 507 A-VPSGGVATAVATPPQSEGAENSAAANESTTSTDGYPLISGDEATSSWSQVLQEMD--P 563 Query: 535 LVEQVALNAWKEESDNAVCLH-LRSSQRHLN-----NRGAQQKLAEALSMLKGSTVELTI 588 + +A A + +S L + L ++++ LS + G L Sbjct: 564 MTATLAKAAERVDSPEPGVLRMIFPGNSGLAFSRCQMPEHKEEILRTLSRVTGRRATLQF 623 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + P+ + + ++ + RE I A+ +Q+ AE+ Sbjct: 624 EATAVKKIE-PVAAAKPKNKNRMQRMRE-IQANPLVQSCVELLGAEIV 669 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 144/452 (31%), Positives = 218/452 (48%), Gaps = 5/452 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQ H+ T L N + ++ A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFVVSARKYRPATFDTVVGQSHITTTLKNAIKSNQLAQAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCETGITA-TPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T CG C++C + +++ E+DAAS V+D R+L+D V+Y P G+ Sbjct: 63 INCLTPTEDFEACGTCESCVSFQNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQSGKR 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPPE+V F+LATT+ K+ TILSRC F K ++V Sbjct: 123 KVYIIDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTEKHKIIPTILSRCQIFDFKRIEV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 + + L +I +E I E AL L+A+ A+G LRDALSL D D ++ Q+V Sbjct: 183 KDMSGHLANIAQKEEIEAEQDALDLIAQKADGGLRDALSLFDLITTFSADRHITYQSVVK 242 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 L LD D + +A++ + V+ +E +G + + + L + M + P Sbjct: 243 NLHILDHDYYFKITDALLAQDMPLVLLYFDEILRKGFDGHIFIAGLGAHLRNVMMCK-DP 301 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A L ++ R E A+ + + + + R VE+ L++ Sbjct: 302 ATVKLLEVSEKVKQRFAEQAQNASASFLLSALNLANDCDLHYKSSKNPRFFVELVLMKMA 361 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + + + V P P T V Q S QQ P + Sbjct: 362 NLNRVIDWAQNPVEIAGQPPADPEKKKPETNVAEQNNSHQQQQAPPPAKMSLEYTKKENP 421 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALER 449 + + + + +N + Sbjct: 422 KTPVIPNKPDVTLKVDTSNGSVQASDNTPFTK 453 >UniRef50_A4C5P9 Putative DnaX, DNA polymerase III, gamma/tau subunits n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5P9_9GAMM Length = 820 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 245/576 (42%), Positives = 336/576 (58%), Gaps = 43/576 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F +VGQEHV AL N L+ R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQNFHQLVGQEHVKQALVNALTQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITATPCG C C +IE GR++DL+EIDAASRTKVEDTR++LDNVQYAP RGR+ Sbjct: 61 SLNCELGITATPCGQCSACLDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+L AL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLSALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL +L EE I E +L LLA+AA+GS+RDALSLTDQAIA +GQV+ V +M Sbjct: 181 PQIEQQLSFVLTEEQIHFEVASLALLAKAADGSMRDALSLTDQAIAQTNGQVNESQVKSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D A L+ ++V+ +G +++L+ + + +++L ++L L H + + QL P+ Sbjct: 241 LGLMDASWAKRLLVSIVDKDGAELLSLVADLVKQNANAKSVLDDLLSLTHLLLLTQLVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + +++++ P +Q+YYQ LL G+K+L +APD ++G+EM LLR LAF Sbjct: 301 AAAFNEDEADF-IDAMSKSLSPEQVQVYYQLLLGGKKDLQWAPDEKLGLEMVLLRLLAFE 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + + P+ +P ++ Sbjct: 360 PHFSASN------------TISTVMPSALPSSNKAMSN---------------------I 386 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 R A +A + A T + + PVP+A ++ + A Sbjct: 387 RQMLAGQASGDKLTAQTAQTAQTAQTAQTAQTTQTTQNNSPVPTASVESVVEHPAVAADK 446 Query: 481 TT-PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE----RDPWAAQVSQ-LSLPK 534 P + E + P + A+ +A + E+ E +D W Q + L+ + Sbjct: 447 VQTPELAVVENASEPLISQSAVSAVPLDAVALNNSLESTEPEQSQDAWHQQYDEILTQAQ 506 Query: 535 LVEQ---VALNAWKEESDNAVCLHLRSSQRHLNNRG 567 + +A A ++A+ + + HL Sbjct: 507 EYREYSDLAHQANTVPDNSALMQQINQPEDHLVTDT 542 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 67/373 (17%), Positives = 119/373 (31%), Gaps = 36/373 (9%) Query: 293 AMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT 352 + Q + +A+ D A+ + Y +L +E D Sbjct: 462 LISQSAVSAVPLDAVALNNSLESTEPEQSQDAWHQQYDEILTQAQEYREYSD-------- 513 Query: 353 LLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 LA +P+ Q V + Q Sbjct: 514 ----LAHQANT-VPDNSALMQQINQPEDHLVTDTVSLESQADLPTSAQLVEQQLSGAQSA 568 Query: 413 LAARQQLQRVQGATKAKKSEPAA-----ATRARPVNNAALERLASVTDRVQA--RPVPSA 465 +AA + + + K + T ++ ++ + Q RP Sbjct: 569 IAAILRNRNISSHGLVKPESSSLPLSSINTPGDTEKKTEPQQRGNLVAQSQQQIRPNDER 628 Query: 466 LEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKL------------ 513 +KA A + + L + + E A+ Sbjct: 629 EDKAMVAYAAVEKPQSPRSSHVMDPAHLAPELLVQISEQPKVEEVAETQVIEIPEGFVSP 688 Query: 514 ---AAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQ 570 A ++D WA + Q+ L + Q AL+ + D V L + + Q+HL++ ++ Sbjct: 689 LTDIRFAHQQDAWANLIEQMQLGGRIRQFALHGLFSQQDQNVTLQVDAQQQHLDSAVMRE 748 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 KL E+LS+ + L+I E N TP + +Q + + A+E I D Q R Sbjct: 749 KLTESLSLALARDITLSI-EFVNAVTGTPYQIQQQLDSNRWYHAKEVIENDAVTQQFMRR 807 Query: 631 FDAELDEESIRPI 643 F A +DE SIR + Sbjct: 808 FAAVIDENSIRAL 820 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 139/357 (38%), Positives = 217/357 (60%), Gaps = 4/357 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RPQTF +V GQEH++T L N + RI HAYLF+G RG GKT++A+LLAK Sbjct: 1 MSYKALYRSYRPQTFGEVAGQEHIVTTLKNAIKENRISHAYLFAGPRGTGKTTVAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC TG PC C NC+ I G D+IEIDAAS V++ RDL+D V+YAP G++ Sbjct: 61 ALNC-TGENP-PCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGKY 118 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP H+ F+LATT+P K+ TI+SRC +F K ++ Sbjct: 119 KVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTEPHKILPTIISRCQRFDFKKVEN 178 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE++L E+ +E AL+ +A+ AEG +RDALS+ +Q +A + +++ ++V+ + Sbjct: 179 HDIISRLEYVLKSENKKYELSALESVAKLAEGGMRDALSILEQCLAY-NNELTVESVNMV 237 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G L D +S ++ ++ + + V+ ++ + I+ + L +++ +L I + + + Sbjct: 238 YGLLSMDNKISFIKQLLSKDIKGVLTSLDNMLSGSIDIKRLTFDLVDVLKDIIIYKNT-Q 296 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + + LA I + L+ + D E+ +L+ Sbjct: 297 DVSILFVLTQQDVDNLAPYILVEEAFEIIDILIEASSHYSQSLDANTYFELAMLKIC 353 >UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH2_9FIRM Length = 577 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 155/605 (25%), Positives = 269/605 (44%), Gaps = 53/605 (8%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RK+RP F ++GQE ++ +L N + + HAYLFSGTRG GKTS A++ A+ + Sbjct: 2 YKALYRKYRPLDFNQMIGQEALVMSLKNQIKNNEVSHAYLFSGTRGTGKTSAAKIFARAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE I PC C +C I VD++E+DAAS V+D RDL D V Y P ++KV Sbjct: 62 NCEHPIDGNPCNKCKSCLSILNNTSVDVVEMDAASNNGVDDIRDLKDKVIYPPTFLKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS+ +FNALLK LEEPP H+ F+LATT+ +K+P TILSR +F + +E Sbjct: 122 YIIDEVHMLSKGAFNALLKILEEPPSHLIFILATTEKEKIPATILSRTQKFEFSRVSLEN 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L++I E + QL+A+ ++G++RDALS+ DQ ++ +S + +LG Sbjct: 182 IIKRLKYISQMEGKTLDDEVYQLIAKTSDGAMRDALSVLDQLLSFDSDHISIEKAMDVLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + L A + + R +++I++ A +G ++ +L ++L + + +V+ Sbjct: 242 ISSSESLFELTSAYLNKDAARAISVIDDIAIQGKDFLSLNNQLLKHMRDLMLVRTLKNPE 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 + +E A T +I L + L YA + R+ +EMT ++ Sbjct: 302 NLVYSTYLKDFKEQAATCDLDNILDIIDELKDLQVNLKYAENPRILLEMTSIKICNKKNF 361 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 L + + S + + S + L + + + Sbjct: 362 KSL-QLNLDNLS----KRVEKLEFLGSLTKESSNNKNIYRQSLEKPNENDIINLNSDMKS 416 Query: 423 QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 + K S Q+ P+ E E + + Sbjct: 417 ENEVLEKSS--------------------------QSDPLSVKTE------ENSDYNRSI 444 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ------VSQLSLPKLV 536 +++ + + + L +TPE + + + W V+Q+ L L+ Sbjct: 445 DEDKKEYHKNSLENIDDQLVDNETPEKSLGINDI---KKDWNEILNDLKAVNQVPLVGLL 501 Query: 537 EQVALNAWKEESDNAVCLHLRSSQR-HLNNRGAQQKLA---EALSMLKGSTVELTIVEDD 592 ++ + + + HL + ++L L G +++ I D Sbjct: 502 NDAKPLSF---ENGTLNICYGPGHEFHLKSTNEPKRLEIIKSVLKKRYGMDIDVKISIAD 558 Query: 593 NPAVR 597 + ++ Sbjct: 559 DTTLK 563 >UniRef50_B6BTP5 DNA polymerase subunits gamma and tau n=1 Tax=beta proteobacterium KB13 RepID=B6BTP5_9PROT Length = 512 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 162/442 (36%), Positives = 254/442 (57%), Gaps = 24/442 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M LARKWRP+ F +VGQE ++ AL N + R+HHAYL SGTRGVGKT+IAR+ AK Sbjct: 1 MKNLALARKWRPKNFETIVGQEFIVEALKNSILGDRLHHAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC TG TPC C +C EI+Q + +D+IE+DAAS T+V++ R+LL+N Y P ++ Sbjct: 61 CLNCHTGSNPTPCCECSSCVEIDQSKSIDVIELDAASNTQVDNMRELLENANYQPTSSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS+ SFNA+LKTLEEPPEHV F+LATTDP+K+PVT++SRCL F+L + Sbjct: 121 KIFIIDEVHMLSKSSFNAMLKTLEEPPEHVIFILATTDPEKIPVTVISRCLHFNLMQMTN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL++I EE+IA+E A+ ++++ A+GS+RDALSL D+ I +G VS + ++ + Sbjct: 181 DEISGQLQNIFYEENIAYEDEAINMISKHADGSMRDALSLADRVINYTNGNVSLEKLTQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D L+ +++ N ++V+ L+N+ I +E+ L + + I+ Q Sbjct: 241 LGITSDGVIDELLTNILDNNKQKVLDLLNKLKEHHISYESALKVLSEKIFAISEEQT--- 297 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 G +I+ + + +Q YQ + G K+LP++P + +G MT++R L F Sbjct: 298 -FGGGNKSIQR-----GKQVSLQLLQTLYQISINGLKDLPFSPSQHIGFRMTIIRLLNFI 351 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + ++ ++ +S P Q+ + Sbjct: 352 PTNNVNAIQLEKEQIN---------------HNESIENHEPKKKKTIENIQIDNWDHVVD 396 Query: 421 RVQGATKAKKSEPAAATRARPV 442 +++ ++ Sbjct: 397 QIKPGMAKTLAQNCVVKSQEDN 418 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 5/210 (2%) Query: 433 PAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVA 492 + R + V+ L+ L ++ S + + R P + Sbjct: 302 NKSIQRGKQVSLQLLQTLYQISINGLKDLPFSPSQHIGFRMTIIRLLNFIPTNNVNAIQL 361 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESDNA 551 + + E + E K E I+ D W V Q+ P + + +A N + + DN Sbjct: 362 EKEQINHN-ESIENHEPKKKKTIENIQIDNWDHVVDQIK-PGMAKTLAQNCVVKSQEDNF 419 Query: 552 VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKL 611 + L + +HLNN + L E+L + G +++ I E TP + +Q ++ L Sbjct: 420 LYLIVDDRFKHLNNDKYIKILEESLYTIYGEKIKIEINE--ETVTSTPAQKKQIEKDDAL 477 Query: 612 AQARESIIADNNIQTLRRFFDAELDEESIR 641 A +SI D+ I+ + FDA++ E +I+ Sbjct: 478 KVATDSIKTDSKIENILNEFDAQIIESTIK 507 >UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 Length = 539 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 203/358 (56%), Gaps = 4/358 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RKWRP TF DV+ Q+ L N + G+ HAYLF+G+RG GKT+ AR+LAK + Sbjct: 2 YKALYRKWRPMTFDDVISQQQTTDTLKNQIMSGKTAHAYLFTGSRGTGKTTCARILAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC CD CR+ + G D++EIDAAS V++ RDL D Y P RG++K+ Sbjct: 62 NCRNMKDGNPCLECDICRDADSGALTDIVEIDAASNNGVDNIRDLRDAAVYTPDRGQYKI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLK +EEPP +VKF+LATT+ K+P TILSRC +F + + E Sbjct: 122 YIIDEVHMLSAGAFNALLKIMEEPPPYVKFILATTEIHKVPATILSRCQRFDFRRIKPED 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L++I +E + ++A+ A+G +RDA+SL D+ + G ++ VSA G Sbjct: 182 IAARLKYIAEQEELTLTDGGAAMIAKLADGGMRDAVSLLDRC-SVGGEEIDEDVVSAAAG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D L+EA+ + + +++ + L E++ L I ++++SP Sbjct: 241 IAGRDYLFGLLEAINTGDTAKALSITASLYDMSKDIGRLCEELISQLRNIMLIKVSPDTA 300 Query: 303 GNDM---AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + A ++RELA + I + L + A +RR+ EM L++ Sbjct: 301 ESLIVCVAEEMQKLRELADSTELDTIMSHISILQECSSNMNRAMNRRVEFEMALIKLC 358 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 149/410 (36%), Positives = 219/410 (53%), Gaps = 4/410 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L R+WRPQ FAD+VGQ+HV L N L R+ HAYLF G RG GKTS A++LAK + Sbjct: 2 YQALYRQWRPQFFADMVGQQHVARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILAKAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE G + PC C CR I+ GR +D+ EIDAAS +++ R+L + +Y+P R KV Sbjct: 62 NCEKGPSREPCNECAACRGIQAGRVMDVQEIDAASNRGIDEIRELREKARYSPVEVRHKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y++DEVHML++ +FNALLKTLEEPP V F+LATT+P KLP TI+SRC + + + Sbjct: 122 YIVDEVHMLTQEAFNALLKTLEEPPGRVLFVLATTEPHKLPATIISRCQRLDFHLIGMTD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L ++++ + + AL L+A A G LRDALSL +Q +A +G +S + V A+LG Sbjct: 182 IAERLRSVVDDSGRSIQDDALYLIAEEAAGGLRDALSLLEQIMAYSEGNISDEDVLAVLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA- 301 + D ++++ + + L+ E AA G + + + + + Sbjct: 242 AVGRDVYYRFTDSLLRRDLAAALLLLQEVAAGGKDLHHFTRQAISYYRDLMVALTCGDDA 301 Query: 302 -LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 R+ + AR + I L E+ +A R+ E+ + R +A Sbjct: 302 VALGIAPDWAGRLHKQARQLGMGTIGHILSELHGLLNEVRWASRPRLLWELAIFRIMA-- 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 P+ + E+P A V P + P Q Q+ P ET S Sbjct: 360 PQAEDRQQELPVSKPADVKPDNTPVVKETPAQNSFPEQKRAAEPAGETAS 409 >UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax=Bartonella RepID=A9IMY3_BART1 Length = 646 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 189/646 (29%), Positives = 310/646 (47%), Gaps = 50/646 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGV----CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V ++C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDTLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G VS V Sbjct: 189 IEAKALSAHLHQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVSAAEV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFVMKGDVIHALHELRSQYDAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPVLSRNWQMLLKGLQEVNQTARPLQATEMLLIR 368 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL--PETTSQVL 413 LA +P + E ++ P ++T S+ Q+A +V ETT V Sbjct: 369 -LAHTADLPTLD-EALKKLTQEKTPLTLVTN--------SSHQEAISVNNITQETTIDVH 418 Query: 414 AARQQLQRVQGATKAKKS-EPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 A+ + + K S +P +P N + + + + ++ +K Sbjct: 419 ASSSVSNTLPNQSDLKTSLQPPLDHSLKPENFVKNKTHDNAKAQEVIEILETSQSTDFSK 478 Query: 473 KEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSL 532 A + V Q E + PK L H+ KLA + + Sbjct: 479 NIA---NLSHSVTQPVEEITEPKTLVINSLHD-----IVKLAEQHSDV----------PF 520 Query: 533 PKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 LV++ + L L + ++K+++ + + Sbjct: 521 KLLVKEFVH--PVSFETGRITLRLSENTPQFLAHDIEKKISQWARKRY------VVTFVN 572 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDE 637 T E AI + + A D +I + F +A++ + Sbjct: 573 EGGGPTLQEESVAIQKTLFSHA----ETDPDIAKILNHFPEAKIVD 614 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 163/415 (39%), Positives = 235/415 (56%), Gaps = 7/415 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ FAD+VGQE + L+ L+ RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQCFADLVGQEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC+ TA+PCG C+ CR I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCQQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFKVY+IDE HMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RFKVYVIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++ + L+ I +E I EP A+ L+A+ A+G LRDA SL DQ + V+ +AV Sbjct: 181 PLQAMTDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQ-LGLLPPPVTPEAVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 +LG + + Q L L+EA+ + E ++ LI + RG E +L + + + + + Sbjct: 240 DLLGAVPERQLLQLLEAIAANDPEALLTLIRQLLDRGREPLTVLQNLTAFSRDLLIARTA 299 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L A + A P I Q L ++ R+ +E+ LL Sbjct: 300 PQRRDLTTVTEATWQELCTFAEDWTPEQILQLQQHLRQSELQIKNTTQPRLWLEVALLGL 359 Query: 357 L-AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQS-APQQAPTVPLPETT 409 L + + P + PV+ A + P + P P + AP P P TT Sbjct: 360 LPSAQAPVTTAPPAIAAPVTRPVSIPAAVVPAETPSSPAAVAPVAIPVAPAVTTT 414 >UniRef50_A5V2B2 DNA polymerase III, subunits gamma and tau n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2B2_SPHWW Length = 582 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 157/377 (41%), Positives = 226/377 (59%), Gaps = 6/377 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RPQ F +++GQ+ ++T LAN + GR+ HA+L +G RGVGKTS ARL+AK L Sbjct: 8 YRVLARKYRPQNFNELIGQDAMVTTLANAIRRGRLAHAFLLTGVRGVGKTSTARLIAKAL 67 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G T PCGVC+ C I +GR +D++E+DAAS T ++D R++++ V+YA Sbjct: 68 NCIGPDGQGGPTIDPCGVCEPCVAIAEGRHIDVVEMDAASHTSIDDVREIIEAVRYASVS 127 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+K+Y+IDEVHMLS+ +FN LLKTLEEPP HVKFL ATT+ K+P+T+LSRC +F L+ Sbjct: 128 ARYKIYIIDEVHMLSKSAFNGLLKTLEEPPAHVKFLFATTEVNKVPITVLSRCQRFDLRR 187 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + +++ +++ E + +P AL L+ARAAEGS RD LS+ DQAIA G G+V Q V Sbjct: 188 ITADKLAAHFTNVVAAEGVEADPEALALIARAAEGSARDGLSILDQAIAHGSGRVEAQQV 247 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D L M++ + V+A I G+E A+L +L H I ++ Sbjct: 248 RDMLGLSDRGAVRRLFGEMLKGDAAAVLASIRGQYDLGVEPVAMLHGLLETCHAITRAKV 307 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + A + A + + +Q LL G E+ A EM LLR + Sbjct: 308 AGTDDPALSAEEREAYGDWAGKLGFATLHRLWQLLLKGHGEVQTAAMPIEAAEMALLRVV 367 Query: 358 AFHPRMPLPEPEVPRQS 374 ++P P R + Sbjct: 368 H-ASQLPDPGELARRLA 383 >UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, putative n=2 Tax=Treponema RepID=Q73K31_TREDE Length = 612 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 179/642 (27%), Positives = 288/642 (44%), Gaps = 65/642 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQV A + RPQ F D++GQE V L + G+I HAYLFSG RG GKTS AR+LAK Sbjct: 1 MEYQVTATRRRPQRFEDLLGQEFVAATLQKSIEAGKIAHAYLFSGPRGCGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TPCG C +C EI G +D+IEID AS T V D R + D + + P R+ Sbjct: 61 VLNCAEGPRPTPCGHCTSCEEITAGSCLDVIEIDGASNTSVNDVRQIKDEILFPPNSNRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKT+EEPP +V F+ ATT+ K+P TI SRC QF+ K + + Sbjct: 121 KIYIIDEVHMLSTSAFNALLKTIEEPPPYVVFIFATTEIHKVPATIKSRCQQFNFKLVSI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E ++ L E I+ + AL +AR A GS+RDA +L DQ A DG ++ + + Sbjct: 181 EILKQALADAAAELGISADDEALYWIAREATGSVRDAYTLFDQVAAFSDGHITFEKIHEK 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D LV A V NG+ +++++ GI E ++ + + +V+ Sbjct: 241 LGLTGVDSINKLVSACVAKNGQEALSILDGILQGGISVEQVVSDCADYFRSLLLVKHGIT 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA-- 358 + +++ + I+ +L K+L ++ D+R +E+ + R Sbjct: 301 KEALIGQRADRFPQDILQGWEAVQIERALSIMLQLFKDLRFSIDQRYELELAVSRLSWLG 360 Query: 359 -FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV--PLPETTSQVLAA 415 + L +S T V T +P + +S P+++P T Q A Sbjct: 361 DYVSPADLKTAFDAAKSLISSRRTDVETGRPLPHREESRPKESPRPFDNAGSLTEQFKAV 420 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 ++ ++ T+ K E + P +N + E+ ++ + Sbjct: 421 LRRDNKLDVFTEKKNEEKQPVSNNVPSDNVSFEK-------------KDEAQETVLQTVR 467 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 A V + KE + K + L++ + W Sbjct: 468 SVENAFNNVEELKEPLIEALLEKSGI-----------LSSAVGQSKDWIL---------- 506 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 ++++ L RSS + + + + +++S + G ++L + E P Sbjct: 507 ------------KEDSLTLFARSSFDYTLIQKQKDTVIDSISEITGKKIKLILKEYIPPQ 554 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 +E E++ I+T+ F ++ E Sbjct: 555 PENKVE--------------ETVKEPEKIRTITDVFMGKIVE 582 >UniRef50_A4GJ98 DNA polymerase III subunits gamma/tau n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJ98_9BACT Length = 539 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 179/421 (42%), Positives = 259/421 (61%), Gaps = 9/421 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP +F++VVGQEHVL AL N +S ++H AY+FSGTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKYRPSSFSEVVGQEHVLKALENSISQNKLHQAYIFSGTRGVGKTTIARVFSK 60 Query: 61 GLNCETGITAT--PCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + C C C EI+ GR ++ +E+DAASRT V+D R+LLD+VQY PA Sbjct: 61 CLNCMQADSPQVISCDKCSACEEIKIGRHMEFLEVDAASRTGVDDMRELLDSVQYKPANA 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+YLIDEVHMLS+ SFNALLKTLEEPP HV FL+ATT+ +K+P T+LSRCLQ +LK + Sbjct: 121 RFKIYLIDEVHMLSKSSFNALLKTLEEPPPHVMFLMATTEVEKVPKTVLSRCLQLNLKVI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +I+ L+ +L+ E I ++ ++ L+A +A+GS+RD L+L DQAIA G+G ++ V Sbjct: 181 PEAKIQLHLKSLLDLESIEYDEESIALIADSAQGSVRDGLTLLDQAIAHGNGSLNADDVK 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 A+LGT+D + LVE +V NG+ +++ +E+E +L ++ + H+I++ Q Sbjct: 241 ALLGTIDQSYIIELVEHVVAGNGDGAYNALHKITELNVEYEQVLKILISVFHKISLHQ-- 298 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 ND +I + LA + P QL+Y+ L + P + +E+ +LR LA Sbjct: 299 -QLHNNDSESI----QRLAENLDPQITQLHYEIALNSLGKFHVHPHPKQALELCILRMLA 353 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 F P + P +++ + V QP S + V E T + Sbjct: 354 FQPMGDVVTPRQEKKNLKISSTPQVEIKKTDTEQPASEVIHSKIVSENEQTITKESNPSS 413 Query: 419 L 419 L Sbjct: 414 L 414 Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 69/179 (38%), Gaps = 8/179 (4%) Query: 463 PSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 P +K + + ++ + K E+E+T + + +++ Sbjct: 363 PRQEKKNLKISSTPQVE--IKKTDTEQPASEVIHSKIVSENEQT--ITKESNPSSLDLRS 418 Query: 523 WAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLN-NRGAQQKLAEALSMLKG 581 W + L L V QV + L L+ S +N G + + +++S G Sbjct: 419 WNSMFDSLELSMFVRQVFSEFEFISFVDK-TLVLKKSDDLINPTEGLKTEFIDSISARLG 477 Query: 582 STVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + L I D + +P + EE+L + S++ + ++ + FD ++ +ESI Sbjct: 478 YKISLVIESGDV--IASPAVMHEQEAEEQLNLDKSSLLENPVLKDILDSFDGKIIDESI 534 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 136/363 (37%), Positives = 213/363 (58%), Gaps = 9/363 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R++RPQ FA+++GQ H++ L N L RI HAYLF G RG GKTS A++LAK Sbjct: 1 MAYRALYREYRPQLFAEIMGQRHIVDTLENALKNNRIAHAYLFCGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C + QG +D+IEIDAAS +++ RDL + V++AP G++ Sbjct: 61 ALNCHQIKGVEPCNKCSSCVSVAQGSAIDVIEIDAASNRGIDEIRDLKERVKFAPTGGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPPEHV F+LATT+P KLP+TILSRC +F K++ Sbjct: 121 KVYIVDEVHMLTIEAFNALLKTLEEPPEHVIFVLATTEPHKLPLTILSRCQRFDFKSIGA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD-GQVSTQAVSA 239 E + +L+ IL + + P AL+L+ +AAEG LRDALS+ DQ I + ++S + + Sbjct: 181 EPMTSRLKDILQDLQVKISPAALELIVQAAEGGLRDALSILDQIITFNNTAEISEEDIHN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT+++ SL+E ++ + + +I E G + + + + + + + P Sbjct: 241 LLGTVNERVINSLLEYLLRGDAGSSLQVIAEIFLEGKDLKMFVKGFASCVRDLLLQSIEP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A+ N + + L ++ ++ R+ +E+ L++ + Sbjct: 301 TAIKN--------FSRTDQIYSVEYLLALLDCLTELEPKMKFSSQPRVILELALIKFIYS 352 Query: 360 HPR 362 Sbjct: 353 RRD 355 >UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCQ4_PLALI Length = 682 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 177/598 (29%), Positives = 275/598 (45%), Gaps = 45/598 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y VLAR++RPQTF++VVGQ+ + L N + GR+ HAYLF+G RGVGKTS+AR+ AK Sbjct: 5 NYTVLARRFRPQTFSEVVGQDRIAQTLRNAILEGRVAHAYLFTGARGVGKTSMARIFAKA 64 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC + A PC C+ CR + G+ VD+ EID AS ++D R L NV R R+K Sbjct: 65 LNCPNAVEAVPCNTCEICRAVSAGQDVDVSEIDGASNRGIDDIRTLRANVNVKSMRTRYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHML++ +FNALLKTLEEPP+ VKF+ TT+P KLP TILSRC +F +++E Sbjct: 125 VYIIDEVHMLTKEAFNALLKTLEEPPQGVKFIFCTTEPNKLPDTILSRCQRFDFGTVNIE 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L I N E + A++L++R A GS+RD+ SL DQ +A G V+ V +L Sbjct: 185 SIGERLRQIANTEGFQVDDEAIELVSRRANGSMRDSQSLFDQVLAFGHQHVTVADVHRLL 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS--P 299 GT DD+ + LV+A+++ + R + +++A G++ +AL +++ L + + Sbjct: 245 GTASDDRVIELVQALIDRHAARALEALDQAILDGVQLDALTDQLISYLRDLMVTAAGVKG 304 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + R+ A I Q L + ++ A R E+ L+R Sbjct: 305 IALLGATESSRSRVETQAEAWGLKTISAALQILAEAKIKMARATWGRALTELALVRITLL 364 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 L E Q +P T+S A + Sbjct: 365 EDLSRLDELIARFQG----------------------------KSIPATSSSGRLATDRP 396 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 P A + P + + S + Q++ P + A A Sbjct: 397 MNSSPRVLPP---PVAIIQGSPESRDLPDVQESQPE-FQSQTEPQHHQHATANTSNATVV 452 Query: 480 A-TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 ++ + A ++ +L PEL + EA + + L + Q Sbjct: 453 PVSSDATVSVDSSAEASSISTSL---AEPELVFQPGNEATLLE--YLRTKNTDLTGIHLQ 507 Query: 539 VALNAWKEESDNAVCLHLRS----SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 A + + + + + Q+ L KL + L G+++ L Sbjct: 508 RATHCQIT-GPTQLEIVISANHRFEQQCLEQPNIVSKLEQQLRTATGTSIRLRFTTGS 564 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 144/458 (31%), Positives = 239/458 (52%), Gaps = 18/458 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y+ L R +RP +F +V GQ+H++ L N + +I HAYLF G RG GKTSIA++ AK Sbjct: 7 MGYKALYRTYRPNSFDEVAGQKHIVKTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFAK 66 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE+ PC CDNC ++ G D+IEIDAAS VE+ R+L++ V+YAP +G++ Sbjct: 67 VINCESKEH-KPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPLKGKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKT+EEPPEHV F+LATT+P K+ TI+SRC +F + Sbjct: 126 KVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPK 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ IL +EHI + ++L+A+ A+G LRDALS+ DQ IA + Q ++ + Sbjct: 186 NEIVSRIHTILEKEHIECDDDVIELIAQLADGGLRDALSILDQCIAYATNHIELQHINEI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + L + +M +++ +G++ L V+++ LL + + + Sbjct: 246 YGITTVQEKMKLFHHIFNNEPVDLMDMLDGMLEKGLDIPRLTVDLIELLKESIIFEYTKD 305 Query: 301 -----ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +L N+ A + + L + L+ ++ +A + E+ LL Sbjct: 306 SSLLHSLSNEQAVEFITSKSLKARFEMIHL------LMDTYEKYRFASNVGSYFEVCLLE 359 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 + + + E ++ + V ++ + Q ++ + T+ ET + A Sbjct: 360 MINCNG---ISELQIEKTEPKAVDAKKNVSRETLSNQNETINDERDTI---ETEFECDTA 413 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASV 453 + ++ + + A N L LA Sbjct: 414 EEIFEQASEEITVNEDKKGQAPIKPLDNEYVLGLLAGA 451 >UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATA7_RUBXD Length = 567 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 171/527 (32%), Positives = 247/527 (46%), Gaps = 23/527 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + L R+WRP+TF ++ GQE V+ L + GR+ HAYLFSG RG GKTS A++LA Sbjct: 1 MKHATLYRRWRPRTFGEIAGQEPVVRTLRRAIETGRVAHAYLFSGPRGTGKTSTAKVLAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G T PCG C++CR I G +D+IE+DAAS +++ R+L D V APA GR Sbjct: 61 GLNCAQGPTPEPCGRCESCRSIVAGSSMDVIEMDAASNRGIDEIRELRDRVNLAPAAGRA 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLK LEEPPEHV F+LATT+ K+ TI+SRC F + V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKMLEEPPEHVVFVLATTEKHKVLPTIISRCQSFDFRRPGV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + +L I E I E AL +ARA+ GS RDA + DQ + +G+V+ V + Sbjct: 181 GTLVEKLSEIARAEGIEAEREALTAIARASGGSFRDAEGMLDQISSFSEGRVTVALVREL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG+ + +A+ E + +++ ++ G + E++ L + ++ +P Sbjct: 241 LGSAGPEMLAETADALHERRAADALRVVDRLSSEGRDLGQFAAELISHLRVLMLLPHAPE 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AAL + E AR IP + + L + D ++ +E+ L+ LA Sbjct: 301 AALAEAGPEERPALEEQARRIPTGETVRMIEALGETSGRIRRGGDPKLELELCFLK-LAR 359 Query: 360 HPRMPLPEPEVPRQSFAP------VAPTAVMTPTQVPPQPQ--SAPQQAPTVPLPETTSQ 411 P E V R AP + P QP A + P P T Sbjct: 360 DYTEPSLEGLVRRVEALEKRLEEGSAPPRENPAKESPEQPPDGRAGEAPPRQEEPPRTGA 419 Query: 412 VLAARQQLQRVQGATKAKKSEPAAATRAR-----------PVNNAALERLASVTDRVQAR 460 L LQ ++ + + + R P A L + A RV Sbjct: 420 ELDWDSVLQELRARRQVPVAALYESARVEGCEDGLVKISFPEELAPLMKSAGEPKRV--E 477 Query: 461 PVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 P+ LE+ + K + + P E E P Sbjct: 478 PLRDVLEERLGFRPRVELKLSGEAPPRPPAAYPPSPEPARREGEDAP 524 >UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG88_CORK4 Length = 990 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 164/557 (29%), Positives = 250/557 (44%), Gaps = 23/557 (4%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFADVVGQEHV L+ L GRI+HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYRKYRPATFADVVGQEHVTVPLSRALDAGRINHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T+TPCG C++CR + G +D+ E+DAAS VED RDL D YAPA R++V Sbjct: 62 VHGPTSTPCGECESCRALAPGGPGSLDVTELDAASHRGVEDMRDLRDRAIYAPAESRYRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+++ FNALLK +EEPPEH+ F+ ATT+P+K+ TI SR Q+ + L Sbjct: 122 FIIDEAHMITKEGFNALLKIVEEPPEHLVFIFATTEPEKVLTTIKSRTHQYPFRLLAPND 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAML 241 +R LE I +EE + E L+ RA GS RD+LS+ DQ +A D ++ + +L Sbjct: 182 MRGLLERICSEEKVQVEDSVYPLVIRAGGGSPRDSLSVLDQLLAGADENGITYAHAAGVL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D + VE++ + + IN G + +++ + ++Q P A Sbjct: 242 GITDSALIDAAVESVANNDPAGLFTTINNVLDAGHDPRRFATDLVDRFRDLLVLQSIPDA 301 Query: 302 LGNDMAAIELRMRE----LARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + L RE A+++ P + + G EL A R+ +E+ R + Sbjct: 302 FDQGLVDAPLDQRETLADEAQSLGPATLTRCAAVVSDGLNELKGATSPRLLLEIMCARMV 361 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ-APTVPLPETTSQVLAAR 416 MP + S V PT + + + + E ++ + Sbjct: 362 -----MPGAADGIEALSQR-VEALESGQPTASRSTSDNGHRVGSTSSSASEDGTRAAGSG 415 Query: 417 QQLQRVQGATKAKKSEPAA-------ATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 G+ A + + + S + E Sbjct: 416 AADNGASGSDANATPPRAKGGGRIIWPRKNKKTETPTPQTSPSSEANTETSQEAKGTEHR 475 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 + +T + + + + E A+ A DP + + Sbjct: 476 DTGNAKPQETQSTSSGAPETPASPQEDAATPSQDEAAASSQAEAAPSQESVDP--RTMDR 533 Query: 530 LSLPKLVEQVALNAWKE 546 +L K + + AL +E Sbjct: 534 ETLSKYLREQALQQERE 550 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 175/598 (29%), Positives = 257/598 (42%), Gaps = 33/598 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R WRPQ F D+VGQ + AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MAYVALYRTWRPQDFDDLVGQAPIKKALTNALETGRISHAYLFAGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PC C NCREI +G D++EIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTAHPCNQCSNCREITEGTCGDVVEIDAASNRGIDEIRKLREQVYFAPTSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+ TILSRC +F + V Sbjct: 121 KVYIIDEVHMITTDAFNALLKTLEEPPEHVVFILATTEPQKILNTILSRCQRFDFRRATV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I LE + HI EP AL+L+A A+G LRDALSL DQ V+ + V + Sbjct: 181 DEIAEHLEKVAKGSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMAS-PVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + ++ LV + + N + + + +G E E +L E+L + + Q Sbjct: 240 LGLVGREKLRELVTRIGQKNLSGALDALGQLLEQGKEMEQILAELLEYFRALLLYQADRE 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + E A + I + + +E Y+ +++ E+ L Sbjct: 300 YQEIYLTDTREALAETASLFTSSQIVASVERIHEAIRESKYSLRKKIVGELCL------- 352 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + A + + P V A+R Q Sbjct: 353 FDLCENRGNTEAALLARIDSLEQQVAALRQGNGTAPTFVTAVPAAPAAVQAVSASRPVPQ 412 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 AT + P T A ++ A Sbjct: 413 GPVPATPGPSAPPTGGTVRDAFARMAAAARQEISQEPPAPAPAEPAPVPAPAPLPEARPE 472 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 P E P+ + A + W + L + Sbjct: 473 AGPAAAP----------------EGEPQFDG--SGRAQAQQLWQLVLQGLK-QRRKRTFL 513 Query: 541 LNAWKEE----SDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + A D + L + S+ + + + + + L G ++ L +V+ + Sbjct: 514 VYAEMARAADYQDQELLLGVSSAYGKEKMEEPAFRNLIQDILKGAVGQSIRLRVVQQE 571 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 152/370 (41%), Positives = 217/370 (58%), Gaps = 3/370 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP TF++VVGQEHV LAN + R+HHA+LF G RGVGKT+ AR+L K Sbjct: 1 MSYVVLARKYRPNTFSEVVGQEHVTRTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C I G VD E+D AS ++ R+L + V+Y PA R Sbjct: 61 ALNCERGPTAEPCGSCVACETITNGTAVDYFEMDGASNRGIDAIRELTEAVRYQPAVLRK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TILSRC ++ K + Sbjct: 121 KVYVIDEVHMLTTEAFNALLKTLEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 ++ L I E I + A+ L+ R + GS+RD+LSL DQ I+ G + V+ Sbjct: 181 PKLIEHLRRIFAAEEIEVDSGAISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +LV A+ E + + + + A ARG++ L ++ L +A++Q++P Sbjct: 241 VLGVADRSLTRTLVSALAEGDAKSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAP 300 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A L + +RE A + + + ++ +L R+ +++ L+ Sbjct: 301 EAEGLIDGSEEEAAELREHAGRLSRERVTQMFDRMVQACNDLADTQMPRLVLDLALIDVA 360 Query: 358 AFHPRMPLPE 367 A P +PL + Sbjct: 361 ALEPVLPLGD 370 >UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunits gamma/tau dnaX n=2 Tax=Parachlamydiaceae RepID=Q6MDZ7_PARUW Length = 522 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 157/503 (31%), Positives = 247/503 (49%), Gaps = 14/503 (2%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS YQV+ARK+RPQTF +V GQE V+T L N + R+ AYLF G+RG GKT++AR+ A Sbjct: 1 MSEYQVIARKFRPQTFKEVFGQEAVVTTLKNAIKFKRLAQAYLFCGSRGTGKTTLARIFA 60 Query: 60 KGLNCETGITA-TPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC+ PC C +CREI G +D++EID AS +ED R + + V YA G Sbjct: 61 KAINCQNSTEDFEPCNQCTSCREITSGSSLDVLEIDGASHRGIEDIRQINETVGYAATSG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++KVY+IDEVHML++ +FNALLKTLEEPP VKF+ ATT+ K+ TILSRC +F+L + Sbjct: 121 QYKVYIIDEVHMLTKEAFNALLKTLEEPPPKVKFIFATTEAHKVLPTILSRCQRFNLSRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + QI +L+ I ++ I E ALQLLA AEG LRDA SL DQ +A +G+++ V Sbjct: 181 PLSQIMIKLKLIADQLEIDVEEEALQLLAYKAEGGLRDAESLFDQIVAFSEGKINAATVQ 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++LG + + L A E N + + A G + + ++ I ++QL+ Sbjct: 241 SILGLMPREAYFELDLAGKEGNFVKAFEIAYRIFAEGKDLNHFIEGLIDHFRHILLIQLA 300 Query: 299 P--AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + L + A L+ +++ + ++ +E LL Sbjct: 301 GITSPLLTISPKEKQFYERAAHLYTQEQCLDLIDYLIESAQQIRFTHSGKIALEAILLHV 360 Query: 357 LAFHPRMPLPEPEVPRQSFAP-VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 + H R+P+ + +++ + PP +S PQ + + + Sbjct: 361 IRSHFRLPIEVLVQRLGELEQMLGEASLVNSSVFPPLSKSTPQSSLSTEVKNPPLTPPVP 420 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS------ALEKA 469 + Q T + + ++ A + + + + V P P+ + +K Sbjct: 421 LTNNKPSQNLTTSPIEKNLNSSTATSLLSPSTNNCSLFDHFVSEDPTPTQSDLGRSTQKL 480 Query: 470 PAKKEA---YRWKATTPVMQQKE 489 P K + P + Sbjct: 481 PNKDSPSLVAKLNGDNPTPVHQY 503 >UniRef50_Q0RT17 DNA polymerase III subunit gamma (Partial match) n=3 Tax=Frankia RepID=Q0RT17_FRAAA Length = 1016 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 160/476 (33%), Positives = 228/476 (47%), Gaps = 10/476 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RP TFA VVGQEHV AL L GR+HHAYLFSG RG GKTS AR+LA Sbjct: 1 MS-TALYNRYRPATFAQVVGQEHVTDALRKALRTGRLHHAYLFSGPRGCGKTSSARILAA 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVCD C I G +D+ EIDAAS V+D RDL + +APA RF Sbjct: 60 SLNCEQGPTPEPCGVCDECVGIRTGASMDVTEIDAASHGLVDDARDLRERAFFAPASARF 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DE HM++ +FNALLK +EEPP ++KF+ ATT+P K+ TI SR + + + Sbjct: 120 KVFVVDEAHMVTAAAFNALLKVVEEPPPYLKFVFATTEPDKVIPTIRSRTHHYAFRLVPP 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 +R L I +E + +P L L+ RA GS+RD+LS+ DQ +A + D + A Sbjct: 180 GVLRTHLASICEQEGVTVDPTVLPLVVRAGAGSVRDSLSVLDQLLAGADDDGLHYDRAVA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D V+A+ +G + ++++ + G + ++L L + ++ P Sbjct: 240 LLGMTDGVLLDETVDALARHDGAALFTVVDKVVSAGHDPRRFATDLLDRLRDLIIMAAVP 299 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A L + RMR A + P ++ L G E+ R+ +E+ L Sbjct: 300 DADARGLLESFSPDQIDRMRAQAAAVGPAELSRTADVLHGGLVEMRGTTSPRLMLELILA 359 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 RAL P + + + + P P SAP P P ++ Sbjct: 360 RAL--LPAASADPAALLTRLERLERRSVLAAPDSAAAHPASAPGFGPD-PAAGSSPFGGV 416 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 R A A A P A + P + + AP Sbjct: 417 NGPDGPRGMPGPPGPDEAAAPARTASPARPAPAHSARAAAAPASQGPASGSWDAAP 472 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 175/596 (29%), Positives = 273/596 (45%), Gaps = 76/596 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ F DVVGQ ++T L N L GRI HAYLF+G+RG GKT+ ARL+AK Sbjct: 1 MAYEPLHHKYRPQRFGDVVGQGPIVTTLTNALKAGRIAHAYLFTGSRGTGKTTTARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+ C I G +D+IEIDAAS T V++ R+L++ Q+AP + R Sbjct: 61 ALNCIHGPTPDPCGRCEQCLAIATGSALDVIEIDAASNTGVDNIRELIERAQFAPVQSRQ 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHMLS +FN LLKTLEEPP HV F+LATTDPQK+ T++SRC +F + + + Sbjct: 121 KVYILDEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTDPQKVLPTVISRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + LE I +E I E A++L+A+ A+G LRDA SL DQ +A +G + + + + Sbjct: 181 TDMVKHLEEIAWKEDIDIEHEAVELVAQIAQGGLRDAESLLDQ-LALLEGTIGAERIWQL 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + + L + E + + R++ + G E +L ++LG + + +P Sbjct: 240 VGAVPERELLVIGECIQAGDSTRLIEQVRRLLDSGKEPLQVLQDLLGFYRDLLIAHTAPD 299 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L AA +M E A+T+ + + L ++ + R+ +E+ LL LA Sbjct: 300 RRDLVAVTAASWQQMCERAKTLSIPQLLALQERLRQAEPQIKTSTQPRLWLEVGLLGLLA 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 +P Q V L ++ A Sbjct: 360 -------------------------------------SPSQNQPVALAPAAARPAAPVPV 382 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + PAA N+ + T + + P ++E A A R Sbjct: 383 PPPRPAEERPTPPPPAAPRGVEERPNSVPQPPVEPTPPQRPQVPPPSIEPAAAIHRPARP 442 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 +TP E+ PE W + Q + Sbjct: 443 SGSTPDGTG--------------LRERWPE--------------WIRLIPQ-----PTQS 469 Query: 539 VALNA-WKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + ++ W EE+ + + + + + +++ E L G +E+ Sbjct: 470 LMSSSFWLEETPKRLVIGFTTEPLVKRASEPRRLKQIQEVLQQFLGRPIEVQFHIG 525 >UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 Tax=Porphyromonas gingivalis RepID=B2RJ68_PORG3 Length = 602 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 143/481 (29%), Positives = 231/481 (48%), Gaps = 9/481 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V A K+RP +FA +VGQE + L + + + HAYLF G RGVGKTS AR+ A+ + Sbjct: 5 YIVSALKYRPDSFASMVGQEALSATLKSSIVQQKTAHAYLFCGPRGVGKTSCARIFARAI 64 Query: 63 NCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC CG C++C+ ++ R +++ E+DAAS V+D R L++ P G++K Sbjct: 65 NCLERLPDGEACGRCESCKAFDEQRSMNIYELDAASNNSVDDIRLLIEQANVPPQIGKYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS+ +FNA LKTLEEPP +V F+LATT+ K+ TILSRC F K + Sbjct: 125 IYIIDEVHMLSQQAFNAFLKTLEEPPSYVIFILATTEKHKILPTILSRCQIFDFKRIPPA 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I L ++ + E I E AL ++A A+G +RDALSL D+ +G ++ L Sbjct: 185 RIEQHLRYVADSEGIKAEAEALAIIATKADGGMRDALSLFDRIARFSEGNITYANTIENL 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ-LSPA 300 LD D L + ++ + V+ +++E A+G + + ++ + + M Q S Sbjct: 245 NILDYDYYFRLTDFFLQGDYRSVLIVLDELLAKGFDGQVIVSGLASFFRDLMMAQDASTL 304 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA-F 359 L + R ++A P + + + L ++ + +R+ +E++L+ A F Sbjct: 305 PLLEQSEVVIQRYVDMAARCPTSFLYQSLKILNACDQQYRQSNGKRLLLELSLMNIAALF 364 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAV-MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + P P Q P +V P QP AP Q+ P P Q Sbjct: 365 SKGLTAPPPTHGAQHANPAVSGSVSPRPAPAKEQPSVAPSQSSVPPQPSIGEQRRQPETT 424 Query: 419 LQ-----RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 + + + P A + L + + +++Q E + Sbjct: 425 APTITEDKPEQTKVVPPTRPMATSTVGSEGRFTLRGIRNKQEQLQNNIQEVRTEMTESFD 484 Query: 474 E 474 E Sbjct: 485 E 485 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 153/459 (33%), Positives = 234/459 (50%), Gaps = 16/459 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ F+D+VGQ + T L L RI AYLF G RG GKTS AR+LAK Sbjct: 1 MTYEPLHHKYRPQRFSDLVGQGAIATTLTQALLKERIAPAYLFCGPRGTGKTSSARILAK 60 Query: 61 GLNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + T PCG C+ CR++ G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLRSSKPTPDPCGQCEVCRQVANGTSLDVIEIDAASHTGVDNIRELIEKAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSVSAFNALLKTLEEPPPQVVFILATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + ++ L++I ++E I EP AL L+A+ ++G LRDA SL DQ ++ +++ + V Sbjct: 181 PLGEMVAHLQNIADKEQIDIEPEALTLVAQLSQGGLRDAESLLDQ-LSLYPERITVEQVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 + G + + L+ A+ + V+ + RG + +L + L + + + Sbjct: 240 QLTGAVPEQDLRQLLGAIARRDAVSVLEHTRQLLERGRDPLTILQNLASLYRDLLLAKTV 299 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L A + LA +I + L ++ + R+ +E+++L Sbjct: 300 PQRRDLVALTAETWQALIALAEAWSVEEILHAQEHLRTCEGQIKQSNQPRLWLEISILGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP--QPQSAPQQAPTVPLPETTSQVLA 414 + E A + T PP + + A P PLP+ S + Sbjct: 360 MT--------ERVAQPPPPAVMPAARPQPTTMTPPRTEAEVAVAAKPAEPLPQD-SALSV 410 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASV 453 +Q A P V AL+ L + Sbjct: 411 NHPHIQATAAAAPEPALFPEPVANPEQVWQQALQVLQQM 449 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 172/602 (28%), Positives = 280/602 (46%), Gaps = 21/602 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L K+RPQTF+ +VGQ+ + L + L RI AYLF G RG GKTS AR+LAK L Sbjct: 2 YEPLHHKYRPQTFSQLVGQDAIAQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILAKSL 61 Query: 63 NCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 NC + TA PCG CD C+ + QG +D++EIDAAS T V++ R+L++ Q+AP + R+ Sbjct: 62 NCLSSEVPTAQPCGQCDVCQAVIQGIALDVVEIDAASNTGVDNIRELIERSQFAPVQCRY 121 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y++DEVHMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + + Sbjct: 122 KLYVLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTDPQRVLPTIISRCQRFDFRRIPL 181 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L +I EE I EP A+QL+A+ ++G LRDA SL DQ ++ +++ + V + Sbjct: 182 PSMIKHLSYISAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQ-LSLQANKITVETVWDL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + L+LV A+ + ++ + +G E +L ++G + + + +P Sbjct: 241 VGAVPERDLLNLVRAIAADDSTALLERVRHLMDKGREPLIVLQSLVGFYRDLLIAKRAPK 300 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + M A+ + + Q L ++ R+ +E+TL L Sbjct: 301 RVDLVAITSPTWAEMIPFAQKLSAAALLASQQKLQSAEVQIKNTTQPRLWLEITLTGLL- 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + +++ A A T T +A + + + +A Sbjct: 360 -----PSALEVMAKRTPASNAATNPATNRANSAAVDNARETTAATDITSSVKPKIAPSIT 414 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARP-VPSALEKAPAKKEAYR 477 V+ A + P + +P AA S T+ + P +P + A+ Sbjct: 415 PPIVKPAIASTIQHPVPPSVDQPAQTAATGASKSPTEPPVSLPAIPGEPNEPKAELSDSS 474 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER--DPWAAQVSQLSLPK- 534 + + V++ P A P K A A D W ++ L Sbjct: 475 ASSNNLDPAKAAVLSDPSAASATQPTPLKPAAPEKPIAVAFGNLSDLWKQILAVLQPRGT 534 Query: 535 ---LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + +Q L + V Q+ R L A + +++++ Sbjct: 535 QMLMSQQGMLLGFDG-VGAKVGFRSAPLQK--AARERIPNLEAAFQTVFQRPIKISLEVV 591 Query: 592 DN 593 D Sbjct: 592 DT 593 >UniRef50_Q98BM8 DNA polymerase III tau n=2 Tax=Mesorhizobium RepID=Q98BM8_RHILO Length = 604 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 165/464 (35%), Positives = 253/464 (54%), Gaps = 7/464 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RP F+++VGQE ++ L N + GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 18 AYRVLARKYRPSNFSELVGQEPMVRTLTNAFATGRIAQAWMLTGVRGVGKTTTARILARA 77 Query: 62 LNCETGITATPCGV----CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P ++C+ I +GR VD+IE+DAAS T ++D RD+++ V+YAP Sbjct: 78 LNYKTATVDQPSVDLAVLGEHCQAIMEGRHVDVIEMDAASHTGIDDIRDIIERVRYAPVS 137 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+T+LSRC +F L+ Sbjct: 138 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPPHVKFIFATTEIRKVPITVLSRCQRFDLRR 197 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 +D + L I +E I+ + AL ++ARAAEGS RD+LS+ DQAIA G G VS +AV Sbjct: 198 IDAGALVAHLSSIAAKEGISVDDDALAMIARAAEGSARDSLSILDQAIAHGAGAVSAEAV 257 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 AMLG D + + L E +++ + +A G + A+L ++ H + ++ Sbjct: 258 RAMLGLADRARIVDLFEHVMKGDVAAALAEFRTQYDTGADPAAVLTDLAEFNHLVTRLRF 317 Query: 298 SPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 P A+ + + + R R + AR + + +Q LL G E+ + EM L+R Sbjct: 318 VPTAMDDASLSQDERQRGADFARALSVRVLSRTWQMLLKGIPEVQSSNRPVSAAEMVLIR 377 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 LA +P + + A P P P + + A Sbjct: 378 -LAHAADLPTLDEALRSLDGAATVQNGASRPNGAPGGPGNGGGAGAVAQTRMPSGSSGAQ 436 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 +L A A + PA + + V +L + ++ D + Sbjct: 437 TMRLVEAAPALAAFVAPPAPVSEPQQVPVRSLADIVALADAQRD 480 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 230/511 (45%), Positives = 303/511 (59%), Gaps = 19/511 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TFAD+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVVKALQNALGKGRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCET PCG C +CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 61 SLNCETPHEGEPCGQCQSCRDIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L E I +E AL LL RAA GS+RDALSL DQAIA G G V+ V M Sbjct: 181 QQVSQHLAHVLTSEQIPYEAPALALLGRAAAGSMRDALSLLDQAIAMGSGSVTEADVRQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D SL++A +G ++A E A R I +++ L E+ LL ++A+++ PA Sbjct: 241 IGAVDQHYLYSLLQAAANQDGAVLLATAQEMAGRAIGFDSALSELALLLQKLALIKTIPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D + +++LA + IQLYYQ ++ G+++LP APD G MTLLR LAF Sbjct: 301 AVPADDPERDT-LQQLAGQLGDEQIQLYYQCVIHGKQDLPLAPDEYAGFVMTLLRLLAFA 359 Query: 361 PRMPLPEPEVPRQSFAPV-APTAVMTPTQVPPQPQSAPQ----------QAPTVPLPETT 409 P PE + S + + P P PQP P+ A P + Sbjct: 360 PLAAAELPEGSQISGSELHDPAPKPRPAAT-PQPDKPPRLAENHIAEAPPAQAEPRLPES 418 Query: 410 SQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA-----SVTDRVQARPVPS 464 + S+ +A ERL S R + P P+ Sbjct: 419 GHNSQNEHGSFSGSPNNNGRLSQNNPLPQATATAARHTERLPENISGSPNSRHELSPNPN 478 Query: 465 AL-EKAPAKKEAYRWKATTPVMQQKEVVATP 494 A AP E R + P Q E V T Sbjct: 479 ASGNPAPGLAEPGRPYPSEPQPTQTEAVPTA 509 Score = 92.7 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 95/276 (34%), Gaps = 12/276 (4%) Query: 374 SFAPVAPTAVMTPTQVPPQP-QSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSE 432 S P A P +P S PQ T +P T+ S Sbjct: 474 SPNPNASGNPAPGLAEPGRPYPSEPQPTQTEAVPTAFESNPPWDDAPPPAGFETRQPDSP 533 Query: 433 PAAA-TRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVV 491 P++ P N A E R Q +P A ++ E+ P +Q + Sbjct: 534 PSSGLAETEPSQNPANE---FPHSRNQNDSLPQHKHDAASRNESGLGSERLPETEQSGFL 590 Query: 492 ATPKALKKAL-EHEKTPELAAKLAAEAIERDPWAAQVSQLSLP-KLVEQVALNAWK---E 546 +P +A +TPE A + D W V+ ++ + A + + Sbjct: 591 QSPNGQTEAQSAAAETPEHTGTAALPLPDADTWPHIVAAIAPKIGAAQMSAQHTACLGYD 650 Query: 547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL-TIVE-DDNPAVRTPLEWRQ 604 + + L + + + +R Q++ + L+ G V + TI D A TP +Q Sbjct: 651 PQQHLLTLAVAEAGQVSISREHIQRIEQHLAAAYGHPVSIRTIDWPADGNAAETPAMRQQ 710 Query: 605 AIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + + QA+ + D+ Q + F A ES+ Sbjct: 711 RLRQAARDQAQSLLEQDSAAQDILNLFGARWLPESL 746 >UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Micrococcineae RepID=C7NGE4_KYTSD Length = 796 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 173/619 (27%), Positives = 281/619 (45%), Gaps = 36/619 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L R++RPQ F++VVGQEHV L L GR++HAYLFSG RG GKT+ AR+LA+ Sbjct: 1 MS-TALYRRYRPQNFSEVVGQEHVTGPLQQALRTGRVNHAYLFSGPRGCGKTTSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T +PCG CD+C+++ +G VD+IEIDAAS V+D RDL + + PA+ Sbjct: 60 CLNCEQGPTDSPCGECDSCQDLARGGAGSVDVIEIDAASHGGVDDARDLREKASFGPAQS 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HM++ FNALLK +EEPPEHV F+ ATT+P+K+ TI SR + + + Sbjct: 120 RYKVYIIDEAHMVTSAGFNALLKIVEEPPEHVLFIFATTEPEKVIGTIRSRTHHYPFRLV 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAV 237 ++ L + E I EP L + RA GS+RD++S+ DQ IA D ++ Sbjct: 180 PPAVLQEYLAQVCEREGITVEPGVLSYVVRAGGGSVRDSMSVLDQLIAGSDDAGITLAGT 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +A+LG D + +V+A +G + + G + + ++ + + +V Sbjct: 240 TALLGFTDSELLDGVVDAYAAGDGASLFTTVERVVESGQDPRRFVEDLSERMRDLILVNA 299 Query: 298 SPAALGNDMAAIE----LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P + + R+R A + P ++ L G E+ A R+ +E+ + Sbjct: 300 VPTGTEAVLPGVPSDQLDRLRVQASGLGPAELSRASDVLFHGLAEMTGATSPRLQLEIIM 359 Query: 354 LRAL--------AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPT-VP 404 R L F R+ E + + A TA P Q A Q +P Sbjct: 360 ARLLLPRAAGEGGFAARLEKVERWMAFRGDASAGGTAGAQ-AGAPAQEAPASQGSPVAQS 418 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER--LASVTDRVQARPV 462 P + ++Q + + A + + + +P + + +P Sbjct: 419 APAVPAAAAPQQEQSRAQEPARRDQTPRDEQREQEQPARQDRTPQGEERAQEQPAAPQPA 478 Query: 463 PSALEKAPAKKEAYRWKATT------PVMQQ---KEVVATPKALKKALEHEKTPELAAKL 513 P + A W+A P E A +A + A E +P A Sbjct: 479 AEQAPPVPDEPPADMWEAEEAAAAAGPDSAGDRTPEPGAPQQAQQAAPEGSSSPGAAP-- 536 Query: 514 AAEAIERDPWAAQVSQL-SLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQ--- 569 R W + +L + ++ + + + + ++ L L + + R ++ Sbjct: 537 VPLETLRHEWPTVLDKLKDISRVTWALVSQSMQVQDLSSEGLTLATEVAPIAERFSRGEN 596 Query: 570 -QKLAEALSMLKGSTVELT 587 ++A A+ G + Sbjct: 597 ADRVAAAVQEALGFHPRVR 615 >UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL6_9BACT Length = 598 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 181/623 (29%), Positives = 279/623 (44%), Gaps = 39/623 (6%) Query: 21 QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCR 80 Q H++T L N ++ R+ AYLF G RG GKTS AR+ AK LNC T PCGVCD C+ Sbjct: 6 QAHIVTTLKNAIAQNRLAQAYLFVGPRGTGKTSTARIFAKALNCVHAPTTNPCGVCDMCK 65 Query: 81 EIEQGRFVDLIEIDAASRTKVEDTRDLL-DNVQYAPARGRFKVYLIDEVHMLSRHSFNAL 139 EI G ++++E DAAS T+V+ R+++ DNV+YAP RG +K+Y++DEVHMLS SFNAL Sbjct: 66 EIAAGNSLNVLEFDAASNTQVDKIREIIIDNVKYAPTRGNYKLYIVDEVHMLSNSSFNAL 125 Query: 140 LKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHE 199 LKTLEEPP HVKF+ ATTD QK+P TI+SRC +F L+ + +I L I +E I Sbjct: 126 LKTLEEPPPHVKFVFATTDVQKVPTTIISRCQRFDLRRIPTPEIAQHLLFIAGKEAIELT 185 Query: 200 PRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEA 259 P A + +AR AEG LRDA S+ DQ +A ++ Q V + G L E ++ Sbjct: 186 PTAAESIARGAEGGLRDAESMLDQLVAFCGDKIDEQNVLNIFGFTARQTVAELCEHLING 245 Query: 260 NGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIEL-RMRELAR 318 + + I + + G + L+ +++ L + + Q +P L D++A + + A Sbjct: 246 HTGAALGAIQKQSDAGKDLSRLMADLIEHLRNLLVAQSAPETLHEDLSAEAIAELTAQAG 305 Query: 319 TIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPE-----PEVPRQ 373 I + + + +A +++M E+ +RA+ + L E + Sbjct: 306 RIAADKLLNLIEQFADAESRMKWAANKKMHFEIAAIRAVQTLGQASLTEVLDTLTAIRGG 365 Query: 374 SFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEP 433 P P + + P + + P P ++ +A V +A S P Sbjct: 366 GAMPERPVKKVEAPKTPVAAVAEKKTERPKPAPVSSPAPVAEPAAPVSVPAPAEAPASRP 425 Query: 434 AAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVAT 493 + + + ++ + AP + V + Sbjct: 426 SLSAFVAASIGGSEKKTPAA---------------APKPDPKVSAEPAHKVEAKPAATVA 470 Query: 494 PKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVC 553 P A + L P+L ++ + W V L + VAL ++ +D Sbjct: 471 PSANAQEL----WPQLVTRVRKDRPLISDW---VESGQLTDVSSGVALLSFPPSAD---- 519 Query: 554 LHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQ 613 R + NNRG +KL L+ L G+ V L V R+ E Sbjct: 520 -LARDTCERPNNRGFLEKL---LTELTGAPVTLKTETRAGLVVE--KLAREEAKPEPKVD 573 Query: 614 ARESIIADNNIQTLRRFFDAELD 636 E+ D IQ F AE+ Sbjct: 574 PMEAFKNDPLIQKALAEFKAEIL 596 >UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 Tax=Chloroflexus RepID=B8G7M2_CHLAD Length = 613 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 185/649 (28%), Positives = 292/649 (44%), Gaps = 47/649 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L RKWR QTFA++VGQEHV+ L N ++ R+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MAVQSLYRKWRSQTFAELVGQEHVVQTLRNAIAEDRVGHAYLFTGPRGVGKTTMARLLAK 60 Query: 61 GLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC +A PCG C+ C I +GR VD+IE+DAAS T VED R++++ VQ+ P+ R Sbjct: 61 AVNCLHPDPSARPCGTCEMCTAIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPSVAR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 KVY+IDE HMLS +FNALLKTLEEPP+H F+LATT+ K+P TILSRC +F Sbjct: 121 MKVYIIDEAHMLSTAAFNALLKTLEEPPDHALFILATTEVHKVPATILSRCQRFTFVRHS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V + + I E I A + +ARAA GS+RDAL + +Q + +G ++ Q V + Sbjct: 181 VTSMAAHVRRIAAAEGIVLVEGAPEAIARAATGSMRDALGILEQLASFVEGPITLQHVQS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG + +L+EA++ A+ + +N A +G + +++ L + ++ + Sbjct: 241 LLGMTAAAEVDALIEALLSADLTAALRAVNAVANQGADLRQFARDVVERLRAVMLLNATG 300 Query: 300 AALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 D+ E ++ + A+ + + + +L P + +E+ ++ AL Sbjct: 301 DRTLLDLGDDEVAQLMQWAQRAEMAALVQWVKLFSGLDYQLRTTPYGHLPLEVAVVEAL- 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + P PQ P+VP TTS Q Sbjct: 360 --------------------VAPVPVVQPVTPHPHAVRPQSRPSVPASPTTSSARPNIDQ 399 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 A PA + PV + S + + P E+ Sbjct: 400 SMAFTVA-------PALTQPSAPVKPSRATPPPSTEPPTSSPLPATPPVAPPTTPESGVA 452 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 P V A + + +++ A+L+ W + Q Sbjct: 453 PTADPPPPPPAVWAAVQQSRPPVDYPAARAADAELSLLERLEATWEDFKRDVRPRSPTVQ 512 Query: 539 VALNAWK--EESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 LN+ + + N + L + S+ + L + + E L G T + ++ Sbjct: 513 ALLNSARPYDVEGNTIILLVTSTFHKERLEEPKNRAIIEEVLRRRFGKTYAVRCTIEEK- 571 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 P++ R I E + D ++ FDA + I P+ Sbjct: 572 -STEPIDLRAKIREAR---------KDELVRAALNIFDAHIV--GIEPL 608 >UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 Tax=Actinomycetales RepID=C7Q5N1_CATAD Length = 863 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 142/362 (39%), Positives = 199/362 (54%), Gaps = 8/362 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L R++RP+TF +VVGQEHV L L GR++HAYLFSG RG GKT+ AR+LA+ LN Sbjct: 20 LALYRRYRPETFEEVVGQEHVTLPLQQALRNGRVNHAYLFSGPRGCGKTTSARILARCLN 79 Query: 64 CETGITATPCGVCDNCREIEQGRF--VDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 CE G T TPCG C +C E+ G +D+IEIDAAS V+D RDL + +APA RFK Sbjct: 80 CEQGPTPTPCGTCRSCVELANGGSGSIDVIEIDAASHGGVDDARDLRERAFFAPAASRFK 139 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDE HM++ FNALLK +EEPP H+KF+ ATT+P+K+ TI SR + + + Sbjct: 140 IYIIDEAHMVTSAGFNALLKVVEEPPPHLKFIFATTEPEKVIGTIRSRTHHYPFRLIPPG 199 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAM 240 +R L I E I EP L L+ RA GS RDA+S+ DQ +A D V+ + + Sbjct: 200 VLREHLNDITAREGIKVEPEVLPLVVRAGAGSARDAMSVLDQLLAGADENGVTYAMATGL 259 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D LVEA +G V L+++ G + L ++L + ++ Sbjct: 260 LGYTDAALLDRLVEAFAGNDGAAVFGLVDQVVESGHDPRRFLTDLLERFRDLVVLNAVTD 319 Query: 301 -----ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 AL + RM AR+ +++ + G E+ A R+ +E+ R Sbjct: 320 AGAARALIDVPDDQFERMAGQARSFGASELSRAADLVNTGLTEMRGATAPRLLLELVCAR 379 Query: 356 AL 357 L Sbjct: 380 VL 381 >UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococcales RepID=A9GQB3_SORC5 Length = 829 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 174/476 (36%), Positives = 244/476 (51%), Gaps = 11/476 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQ+F D+VGQEHV T LAN ++ R+ HA+LF+G RGVGKT+ AR+LAK Sbjct: 37 MSYVVLARKWRPQSFEDLVGQEHVSTTLANAIARDRVAHAFLFTGVRGVGKTTSARILAK 96 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TATPC C C EI G VD+ EID AS V++ R L +++ Y PAR RF Sbjct: 97 ALNCVHGPTATPCQTCAPCAEITVGADVDVQEIDGASYNGVDEVRKLQESLPYRPARDRF 156 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K++++DEVHMLS ++NA LKTLEEPP HVKF+ ATT+ K+PVTILSRC ++ K + Sbjct: 157 KIFIVDEVHMLSNAAWNAFLKTLEEPPPHVKFIFATTEVHKVPVTILSRCQRYDFKLIGA 216 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA---SGDGQVSTQAV 237 + I +L +L++E I + AL LAR A GS+RDA+SL DQ IA + +++ + V Sbjct: 217 QAIAARLRWVLDQEKIPADDPALSALAREAAGSMRDAMSLLDQVIAWVGTSGDRITAEGV 276 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 + +LG D L A+V+ + + ++ E A G + + + L L + + ++ Sbjct: 277 AKVLGVADRVVLHRLAGALVDGDPAACVRIVGELAQEGYDLPHVARDFLAHLRDLVVAKV 336 Query: 298 --SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 PA L + R LA D+ +Q ++ + R EM L+R Sbjct: 337 CEDPAPLLDLADEEVADTRALAARADADDLTRLHQGFSRAFDDIARSGQPRASFEMALVR 396 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 P +P+ E P+ PQ+ P S AA Sbjct: 397 LARRPPLLPIDELLRRLGDLERRLNGGGGGGGGGGGAPERGPQR------PGAPSSGAAA 450 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 ++ A AA N A + AR +A APA Sbjct: 451 PRRGAASAEAAPEDAHASGAAAAGAARANDAAAFHGAPAANGVARANGAAATGAPA 506 >UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX9_THEYD Length = 512 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 139/384 (36%), Positives = 226/384 (58%), Gaps = 2/384 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y LARK+RPQ F+D+ GQ+ V+ L N L G+I HAY+FSG +GVGKTS AR+LAK Sbjct: 1 MEYLGLARKYRPQKFSDLTGQDVVIKILQNSLQTGKISHAYVFSGPKGVGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C I++GR + +IEIDAAS T VE+ RDL +N++YA A G + Sbjct: 61 ALNCIDSQN-KPCDKCPSCVAIKEGRAMSVIEIDAASHTSVENIRDLRENIRYASAEGFY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDE HMLS+ +FNA LKTLEEPP HV F+LATT+P+K+P+T+LSRC K + + Sbjct: 120 KVYIIDEAHMLSQSAFNAFLKTLEEPPPHVVFVLATTEPRKIPLTVLSRCQHLQFKRIPI 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+ +L+ I N+E+I AL +A +EGS+RDAL++ DQ + + V+ V+ + Sbjct: 180 NLIKQRLQFICNQENINATEEALYTIASNSEGSMRDALTMLDQVTSFTEN-VTQDNVNLL 238 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D + L E +++ N E+++ + E G +++ L+ +++ + + +++ + Sbjct: 239 IGGTDVNVLYELTECLIDGNREKIILKVEELNNFGTDFKRLVGDLINFIRNTLISKITKS 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + +L + + + + L+ + + R+ E+TLL+ Sbjct: 299 FKLYISESEASLIEKLNKKTSEEHLVVLLKELINSEFAIRSSFFPRVIFEITLLKLSFLA 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVM 384 + + + +P+ P ++ Sbjct: 359 HFKNIDDIIEEAKKKSPLQPPSLP 382 >UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 Tax=Frankineae RepID=A8KYB1_FRASN Length = 855 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 150/363 (41%), Positives = 208/363 (57%), Gaps = 7/363 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RP TFA VVGQEHV AL + L GR+HHAYLFSG RG GKTS AR+LA Sbjct: 1 MS-TALYNRYRPATFAQVVGQEHVTEALGHALRSGRLHHAYLFSGPRGCGKTSSARILAA 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVCD C I G +D+ EIDAAS V+D RDL + +APA RF Sbjct: 60 SLNCEKGPTPEPCGVCDQCVSIRTGSSMDVTEIDAASHGLVDDARDLRERAFFAPASARF 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DE HM++ +FNALLK +EEPP ++KF+ ATT+P K+ TI SR + + + Sbjct: 120 KVFVVDEAHMVTAAAFNALLKVVEEPPSYLKFVFATTEPDKVIATIRSRTHHYAFRLVPP 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 +R LE I +E + EP L L+ RA GS+RD+LS+ DQ +A +GDG +S + A Sbjct: 180 GVLRKHLESICAQEGVVVEPSVLPLVVRAGAGSVRDSLSVLDQLLAGAGDGGLSYERAVA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D V+A+ E +G + +++ + G + ++L L + +V P Sbjct: 240 LLGMTDGILLDETVDALAERDGAALFTVVDSVVSSGHDPRRFATDLLDRLRDLIVVAAVP 299 Query: 300 AALGNDM-----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A+ + RMR A I P ++ L G E+ R+ +E+ L Sbjct: 300 DAVERGLLEAFSTDQVDRMRAQAGRIGPVELSRTADVLHAGLVEMRGTASPRLLLELILA 359 Query: 355 RAL 357 RAL Sbjct: 360 RAL 362 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 149/423 (35%), Positives = 226/423 (53%), Gaps = 10/423 (2%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L RKWRPQTF +VVGQEH++ L N L I HAYLF+G RG GKT+IAR+LAK LN Sbjct: 3 IALYRKWRPQTFEEVVGQEHIVITLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKALN 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C G T TPC C++C EI +GR +D+IEIDAAS +++ RD+ + + P R R+KVY Sbjct: 63 CVQGPTPTPCLKCESCVEIAEGRSIDVIEIDAASNRGIDEIRDIREKARLLPVRDRYKVY 122 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+ +FNALLK LEEPPEHV F++ATT+PQK+P+TILSRC +F + L +++ Sbjct: 123 IIDEVHMLTNEAFNALLKILEEPPEHVVFIMATTEPQKVPLTILSRCQRFDFRRLTRDEV 182 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 QL I +E AL+L+A ++GS+RDA+SL +Q + D +++ + +LG Sbjct: 183 IKQLAKIAEKEGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQEITEELARNLLGL 242 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 + + +A+ E N +L+ + G + E+L + +++ +G Sbjct: 243 PTYEFTYNFAKALGEYNILEGYSLLQQIFQMGKNPQQFAKELLQHFRNLLLLKAD-ERIG 301 Query: 304 NDMAAIELRMRELAR---TIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 N ++ + EL + +Q LLI L + + +EM LL Sbjct: 302 NLLSLTQEEFEELMQETKLYTIKRLQDIIDQLLILENRLRDLTNAPLVMEMILL------ 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E + P+ +P + ++ P + Q L Sbjct: 356 PLFMKEETAETQPISQPLTQAVSSSPKGEEKTEEKDKKEEIVTGKPNIDEIIDKWPQLLA 415 Query: 421 RVQ 423 +++ Sbjct: 416 KIK 418 >UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax=Desulfovibrio RepID=C4XU00_DESMR Length = 654 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 185/667 (27%), Positives = 279/667 (41%), Gaps = 47/667 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L K+RPQ FADV GQ+ V L+ + RI AYLFSGTRGVGKT++AR+LAK Sbjct: 1 MSTISLTAKYRPQRFADVAGQDAVKRILSRAAAEDRIAPAYLFSGTRGVGKTTLARVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCET T PC VC CR+I G D+IEIDAA+ KV+D R L ++V YAP R+ Sbjct: 61 ALNCETAPTGEPCNVCSQCRQITAGVSPDVIEIDAATHGKVDDARRLKEDVGYAPLNSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ +FNALLKTLEEPP V F+LATT+P K P TI+SRC + K L Sbjct: 121 KVFIIDEAHMLTTAAFNALLKTLEEPPGRVTFILATTEPHKFPATIISRCQHYLFKRLAQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L E + +E +A+ L+AR GS+RD++SL Q +A G +++ + Sbjct: 181 SELEAHLSSVLMREAVPYEAKAVSLIARRGAGSVRDSMSLLAQVLALGGAELTEADARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L+EA+ +G V+ L+ + +G++ L E+ + + +++ + Sbjct: 241 LGLAGQEVFFGLIEAIRAEDGPAVVELLRQVLDKGLDIGFFLRELASMWRNLFLLRQAGE 300 Query: 301 ALGN--DMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYA-----PDRRMGVEMT 352 D+ A E A I I +Q L G++ + + + + M Sbjct: 301 RALPVVDLPAEEAGEWLVWAGRIEAAHIHACWQMTLEGQRRVQTSLEPALALELLLLNMA 360 Query: 353 LL-RALAFHPRMPLPEPEVPRQSFAPVAPTAV---------MTPTQVPP---QPQSAPQQ 399 L R L P + + P P +PQ Q Sbjct: 361 YLPRLLPLQNLASCAAPAASGPGGSGGSSGRSGGQGGGLTPRQPQGGRPGGYRPQPLADQ 420 Query: 400 APTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 PET ++ AA P + R + T + Sbjct: 421 VAPYGQPETGPGRDQGGYGRPAAGLDAAPPTAQSAAPRSYPPQAAPPVSRSEAPTPHAAS 480 Query: 460 RPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALE-HEKTPELAAKLAAEAI 518 P + A A A P + H+ P A Sbjct: 481 GPGNGSTPPAQAPAAAPAAGGYAPSGSGQSASFAASGQGHGSSGHDDVP---RPPQAAPA 537 Query: 519 ERDPWAAQVSQLSLPKLVEQVALNAWKE-----ESDNAVCLHLRSSQ--RHLNNRGAQQK 571 W + Q + VAL + + + + ++ L + ++ Sbjct: 538 GPRTWDGFLRQAGRGSDM--VALKHAQGTFSPDPAPGELVVSCTNAFHRGRLAHPDKLRQ 595 Query: 572 LAEALSMLKGSTVELTIVEDDNPAVR-TPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 L EA G V + + E + R +P + R + ++ Sbjct: 596 LTEAAEAYFGPGVTVRLTEGEAANDRMSPHDLRDYVD------------NHPEVRQAVTA 643 Query: 631 FDAELDE 637 FDAE+ E Sbjct: 644 FDAEIIE 650 >UniRef50_D1A8C7 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8C7_THECD Length = 715 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 171/574 (29%), Positives = 250/574 (43%), Gaps = 43/574 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L RK+RP TFA++ GQEHV L L GRI+HAYLFSG RG GKTS AR+LA+ Sbjct: 1 MS-LALYRKYRPATFAELKGQEHVAEPLQQALRNGRINHAYLFSGPRGCGKTSSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T PCG C++C + G +D+IEIDAAS ++D RDL + +AP Sbjct: 60 SLNCEQGPTPDPCGKCESCVALGPGGSGHIDVIEIDAASHGGIDDARDLRERAFFAPVSA 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFKVY+IDE HM++ FNALLK +EEPP H+KF+ ATT+P K+ TI SR + + L Sbjct: 120 RFKVYIIDEAHMVTTGGFNALLKLVEEPPPHLKFVFATTEPDKVIGTIRSRTHHYPFRLL 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAV 237 +R +E +L E + +EP AL L+ RA GS RD LS+ DQ +A D ++ Sbjct: 180 PPGTLRELVEEVLQSEGVPYEPAALPLVVRAGAGSARDTLSILDQLVAGADESGITYARA 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 ++LG D +V+A +G V A I+ G + ++L + + ++ Sbjct: 240 VSLLGYTDSALLNEVVDAFAARDGAAVFAAIDRVIESGQDPRRFATDLLERVRDLVILAN 299 Query: 298 SPAA----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A L + +M+ A + + L G +E+ A R+ +E+ Sbjct: 300 VPEAGSTGLLDVPPDELEQMQRQASAMGAATLSRAADLLHAGLREMRGATSPRLALELVC 359 Query: 354 LRAL---------AFHPRMPLPEPEVPRQSFAPVAPTAVM-------------------T 385 R L + R+ E + + Sbjct: 360 ARILLPAAYQDERSLLARLEQLEQRIAQGGIGTTVTGGASPATGAPAPSAPAPQGLAAPA 419 Query: 386 PTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNA 445 P +SA +QAP+ P S+ A Q + P A A P Sbjct: 420 AAPAWPSAESASRQAPS-AYPTAPSRPPAPEPPAQGPSNQSAGASPAPVQAVPAAPRPGG 478 Query: 446 ALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEK 505 A A+ P P A + RW A +P A + Sbjct: 479 AGWGAAATPSVGGGIPAPG----AENRSVDNRWGAPSPPAPASSNAPAGGGPDVAAVRQA 534 Query: 506 TPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 P + + ++ W + +S + L + Sbjct: 535 WPNIVEAVKKKSKV--AWTSIMSGVQPVSLEGNL 566 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 167/514 (32%), Positives = 257/514 (50%), Gaps = 29/514 (5%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+ L K+RPQ FADVVGQ V+ LAN + LGR+ AYLF G RG GKTS AR+LAK Sbjct: 6 NYEPLHLKYRPQRFADVVGQGAVVQTLANAIRLGRVAPAYLFCGPRGTGKTSSARILAKS 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNCE G T PC C CR I G +D++EIDAAS T V++ R+L++ Q+AP R+K Sbjct: 66 LNCEQGPTPDPCQACSQCRAITAGASLDVLEIDAASNTGVDNIRELIERAQFAPVNSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDE HMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + ++ Sbjct: 126 VYVIDECHMLSNAAFNALLKTLEEPPPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L I +E I P ALQL+A+ ++G LRDA L DQ ++ +G ++ +AV ++ Sbjct: 186 DMVAHLGKIAAQEGIPITPEALQLVAQLSQGGLRDAERLLDQ-LSLLEGSITPEAVWDLV 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA- 300 G + + Q L+L++A++ + + V++ + RG E ALL ++ L + +V+ +P Sbjct: 245 GGIPEQQLLALMDALLAQDVQAVLSQTRQLLERGKEPLALLQNLVALYRDLLLVKTAPQQ 304 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-A 358 L + +++ A + L ++ + ++ +E+ L+ L Sbjct: 305 RELVAVTDSTWAALQQRAPRYSVEILLAAQSHLRQCEPQIRQSGQPQLWLEIALVDLLGQ 364 Query: 359 FHPRMPLPEPEVPRQSFA-PVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P M + A ++P TP P A +P+ P Sbjct: 365 LRPSMVAEDSAERSPFPALDLSPAPQRTPPDGTAPPAPAATISPSSP------------- 411 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 +T + E A P ++ + + +P A + A K Sbjct: 412 -------STVGEIDELTVGPSASPAVASSQKADRATRTESSEQPREPARDAATVKLLRPH 464 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAA 511 W + T + H++TPE Sbjct: 465 WDEFLKRLSP----LTKALMGSGHLHQETPEAIT 494 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 163/461 (35%), Positives = 248/461 (53%), Gaps = 13/461 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS Q L RK+R QTF ++VGQEHV L N + G+I HAYLF G RG GKTS ARLLAK Sbjct: 1 MS-QSLYRKYRSQTFDELVGQEHVKKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAK 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + T PC C C I +GR VDLIEIDAASR KVED D+++ V +APA R+ Sbjct: 60 AVNCLSEGT-KPCNSCSACLSINEGRAVDLIEIDAASRRKVEDVADIIERVNFAPAELRY 118 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNALLKTLEEPP H F+LATT+ K+ TI+SRC +F + + Sbjct: 119 KVYIIDEVHMLTTHAFNALLKTLEEPPAHAIFVLATTEVWKVLPTIISRCQRFDFRRITP 178 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +L I E+I + AL +A+A+ GSLRDA+S+ DQ GD +++ + V + Sbjct: 179 REIVERLAFIAENENIKIQKDALIAIAKASTGSLRDAISILDQLTVYGDEEITLEHVKQL 238 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL-SP 299 LG + +D + V A+++ + + ++L+ + + G++ E++ L + +++ + Sbjct: 239 LGIVGEDVVANFVGAIIDNDTQAALSLLTQLSEHGVDPRQFTQELVSYLRDLMLLKAYNQ 298 Query: 300 AALGNDMAAIELR-MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + + L+ + + A + + + + + +E+ + AL Sbjct: 299 NASKAGIERVSLQAISDQASMVSIGRLHEITEKFSTLDYTIRTGSYGYLPLELAAV-ALT 357 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P E RQ P + +V + + + + TS+ AA + Sbjct: 358 NKDSQPYERTENQRQQPNPAHTNSKSVIHRVEEVAEDVKDAISDI-VAKVTSKNDAALPE 416 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 Q Q SEP R + L+RL + + +VQA Sbjct: 417 AQTSQ-------SEPITLDRVQANWQRILDRLKASSLKVQA 450 >UniRef50_C6QBE2 DNA polymerase III, subunits gamma and tau n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBE2_9RHIZ Length = 617 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 158/463 (34%), Positives = 243/463 (52%), Gaps = 16/463 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y VLARK+RP TF D++GQ ++T L N + GRI Y+ +G RGVGKT+ AR+LA+ L Sbjct: 24 YVVLARKYRPATFDDLIGQSAMVTTLRNAFASGRIAQGYMLTGVRGVGKTTTARILARAL 83 Query: 63 NCETGITAT----------PCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 N E + P G+ +C++I +GR D++EIDAAS T V++ R+++++ Q Sbjct: 84 NYEAPDSGNGAIDKPTIDMP-GLGVHCKDIMEGRHPDVLEIDAASNTGVDNIREIIESAQ 142 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P R KV++IDEVHMLS+ +FNALLKTLEEPP HV+F+ ATT+ +K+PVT+LSRC + Sbjct: 143 YTPLVARTKVFIIDEVHMLSKGAFNALLKTLEEPPAHVRFIFATTEIRKVPVTVLSRCQR 202 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQV 232 F L+ ++ + + I E + ALQL+ARAAEGS+RD LS+ DQAIA G+G V Sbjct: 203 FDLRRVEQPVLAAHFKKISESEGAEADADALQLIARAAEGSVRDGLSILDQAIAMGEGHV 262 Query: 233 STQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRI 292 + +V MLG D + L EA+ + + G E ++ ++ +H I Sbjct: 263 TAASVRDMLGLADRGRIFDLAEAIFRGDLPAALNGFASLHRDGAEASEVIGDLAEAVHAI 322 Query: 293 AMVQLSPA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVE 350 A V+ A + A + R+ +LA + + +Q L+ G +E+ P+ + E Sbjct: 323 ARVKAVGEEPAGESLTAEEKKRLSDLASRLSMPYLSRAWQMLIKGLEEVGRTPNPDVAAE 382 Query: 351 MTLLRALAFHPRMPLPEPEVP--RQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET 408 M L+R LA+ +P P+ + S P A+ + T P + Sbjct: 383 MVLIR-LAYTADLPTPDELIRGLGGSAMPARRPALAPAETRTSDTRPTVNTTTTAPRADA 441 Query: 409 TSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA 451 LA V + + +++A+ Sbjct: 442 EHDDLATGDVFDFVGDDGELDDGDALDDDEQTSLSSASRLPDP 484 >UniRef50_Q4JSL3 DNA polymerase III, gamma and tau subunits n=10 Tax=Corynebacterineae RepID=Q4JSL3_CORJK Length = 967 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 166/526 (31%), Positives = 246/526 (46%), Gaps = 14/526 (2%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFA+VVGQ HV L+ L GRI+HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYRKYRPATFAEVVGQSHVTEPLSVALDSGRINHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T+TPCG C++C + G +D+ E+DAA+ V+D R+L + YAPA R++V Sbjct: 62 VEGPTSTPCGKCESCVSLAPGGPGNLDVTELDAATHNGVDDMRELRERAFYAPAESRYRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+S FNALLK +EEPPEH+ F+ ATT+P+KL TI SR + + L Sbjct: 122 FIIDEAHMISTAGFNALLKIVEEPPEHLIFIFATTEPEKLLQTIRSRTHNYPFRLLAPPD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 +R LE +++ E + E L+ RA GS RD+LS+ DQ +A +G V+ A+L Sbjct: 182 MRGLLESVVSGEGVPVEDAVYPLVIRAGGGSPRDSLSIMDQLLAGAGPEGVTYNRALALL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D V+A+ E + + A+++E G + ++L + +VQ P A Sbjct: 242 GVTDSTLIDRAVDALAEHDSAALFAVVDEVIDAGYDPRRFSEDLLDRFRDLLVVQAVPDA 301 Query: 302 ----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA- 356 L N +RE A + + + G ++ A R+ +E+ R Sbjct: 302 FERGLVNAPEESRDVLREQAEKMGQATLTRCASLVNEGLAQMRGATAPRLLLEILCARMA 361 Query: 357 --LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 A L + + A A +A T Sbjct: 362 LPAAGMTVEALAQRVEALEKGNGGAVGTGAGRAGSGAGGSGAGTRAGTGVRGSRAEMFAR 421 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 R+ Q + + + EPA A A+ V NA + L + Q ++ E Sbjct: 422 RRKAAQDAAQQSASAQPEPAQAEPAQRVENAPEQNLTA----GQEPAAEQPPARSVEPPE 477 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER 520 A + Q+ T + ++ E E E A + A A R Sbjct: 478 AVAENSPAKETAQEVSPGTAQGTERGTEPETAQETAEESPAIAEAR 523 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 15/237 (6%) Query: 368 PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV----- 422 PE + A A +P + A +V PE ++ A++ Q V Sbjct: 438 PEPAQAEPAQRVENAPEQNLTAGQEPAAEQPPARSVEPPEAVAENSPAKETAQEVSPGTA 497 Query: 423 QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 QG + + E A T A R + R + + A KA++ Sbjct: 498 QGTERGTEPETAQETAEESPAIAEARRARDIMQRHRQASAAESAAATEEPTPADTAKASS 557 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN 542 + P + A + A+ AA I+ D WA + + L +AL Sbjct: 558 EA---SPAGSEPVEVS-AEASTEASMEASAEAAATIDSDSWARIMDAVHGLDLSAWIALR 613 Query: 543 AWKEESDNAVC--LHLRSSQRHLNN----RGAQQKLAEALSMLKGSTVELTIVEDDN 593 + + +H+ L + ++A+ + GS + + D Sbjct: 614 GASPRAAQPIPGEVHVDHHTGSLARLVSGPKNAEVYSQAIQDVTGSPARIVVYVGDE 670 >UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Tax=Cyanobacteria RepID=B1WS93_CYAA5 Length = 683 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 168/457 (36%), Positives = 246/457 (53%), Gaps = 35/457 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY+ L K+RPQTFAD+VGQE + T L+N ++ RI AYLF+G RG GKTS AR+LAK Sbjct: 3 SYEPLHHKYRPQTFADLVGQEAIATTLSNAIASQRIAPAYLFTGPRGTGKTSSARILAKS 62 Query: 62 LNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC TA+PCG C+ CR I +G +D+IEIDAAS T V++ R++++ Q+AP + R Sbjct: 63 LNCLAVKVPTASPCGQCEVCRAIARGSALDVIEIDAASNTGVDNIREIIERSQFAPVQCR 122 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDE HMLS +FNALLKTLEEPPE V F+LATTDPQ++ TI+SRC +F + + Sbjct: 123 YKVYVIDECHMLSVAAFNALLKTLEEPPERVIFVLATTDPQRVLPTIISRCQRFDYRRIP 182 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +E + L I +E+I E AL L+A+ A G LRDA SL DQ G ++ + V Sbjct: 183 LEAMVEHLTIIAQKENIEIEAEALTLVAQIANGGLRDAESLLDQLSLLSGG-ITPEKVWD 241 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 ++G + + LSL++A+ N E V+ + RG E +L + + + + +P Sbjct: 242 LVGAVPERDLLSLLKAINSNNPELVIESCRKLMDRGREPLVVLQNLAAFYLNLLIAKTAP 301 Query: 300 AALGNDMAAIELRMREL---ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + +A +L A I Q L +L R+ +E+TLL Sbjct: 302 -TRSDLVAVTSTTWDDLCTEAEQWQTETILRGQQKLKESEVQLKNTTQPRLWLEVTLLGL 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVP-----PQPQSAPQQAPTVPLPETTSQ 411 L P A V + PTQ +P++ PQQ + E +SQ Sbjct: 361 L-------------PDACIAEVIVQSSNIPTQTKNNNNESKPKALPQQKTQSNIVEKSSQ 407 Query: 412 VLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALE 448 ++Q + K ++ T P+N+ ++ Sbjct: 408 -----DKIQPLS-----KPNQSVTKTSETPINHDDID 434 >UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46EC Length = 614 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 178/523 (34%), Positives = 267/523 (51%), Gaps = 17/523 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V+AR++RPQ F++++GQEHV AL N L GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 16 AYTVVARRYRPQQFSELIGQEHVAGALVNALKSGRVAHAYLFTGARGVGKTSAARILAKA 75 Query: 62 LNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC T TPC CD+CR + G VD++EID AS KVE+ RDL NV + PARGR Sbjct: 76 LNCLKTDKATPTPCDECDSCRAVMTGDDVDVLEIDGASNNKVEEVRDLRQNVGFRPARGR 135 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHMLS +FNALLKTLEEPPEHVKF+LATT+ QK+P+TILSRC +F + Sbjct: 136 YKIYIIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKIPITILSRCQRFDFAHVG 195 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +I QL+ I+ E + AL+L+AR A GS+RD+ SL DQ +AS G ++ V+A Sbjct: 196 PGKIFEQLKRIVEREGHQADDDALRLVARRAAGSMRDSQSLLDQLLASSSGTLTAGQVTA 255 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT DD+ + L +A++ + + + I E RG++ L+ +++ + +V Sbjct: 256 VLGTAGDDRVIELAKAILANDPKTALDRIAEWVERGLQIGELIDQVVEYWRALMLVSCGG 315 Query: 300 AALGN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + +R A+ + + + L + + P ++ +EM ++R Sbjct: 316 PDVRELPVSPNQHEAIRTQAKAVSLDTVLAGLEILTATKARMRGTPHVQVLLEMAVVRLC 375 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P+ Q V+ V P + P S+ Sbjct: 376 RL------PDLRSLSQLVQAVSQPGVQFVASAASNGNPPPARPQPTPAAPLASEAAKKNG 429 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 AT + SE +++ V L + V R A EK P + R Sbjct: 430 TP-----ATAGRPSENGSSSVPAEVTATPL--SDATVQTVWDRFFRYATEKYPILSQHLR 482 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER 520 + ++ + + + E E + +A++R Sbjct: 483 YASSYAIFGPNALAVRFPTSYANAKKECEGEASLARFQDALKR 525 >UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 Tax=Dehalococcoides RepID=A5FRM9_DEHSB Length = 570 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 164/475 (34%), Positives = 238/475 (50%), Gaps = 28/475 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ QV RKWRPQT AD+VGQEHV L N LS GRI AYLF G RG GKTS R+LAK Sbjct: 4 MTCQVFYRKWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRILAK 63 Query: 61 GLNCETGIT-ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC T PC C C I +G +D+IEIDAAS T V+D R+L + VQY+P+ Sbjct: 64 AVNCTTNQGKGEPCNTCPMCLSITEGSSMDIIEIDAASNTGVDDIRELKEKVQYSPSLAN 123 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDEVHMLS + NALLKTLEEPP V F+LATT+ K+ TI+SRC +F + Sbjct: 124 YKVYIIDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFHRVS 183 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + + +L I E I EP AL+L+AR+A GS RD +L Q + ++S V A Sbjct: 184 LVDMTRKLGKISLAEGINVEPEALKLIARSAGGSFRDGENLLQQIATTYGAEISLSQVQA 243 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG D++ +L E +++ + + + +N A G++ + E+L L +I +V Sbjct: 244 ALGISGDERIKALAENILKKDIKNGLKTLNAVLADGLDLKQFRRELLDYLRQIMLVNSGS 303 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR--MGVEMTLLRAL 357 + A + +++++ +I + +L ++ D + E+ L+ A Sbjct: 304 ESSLELTADEKKALQKVSGITNLENITK----AIKAFSQLDFSSDTASSLSFELALIDAS 359 Query: 358 AFHPRMPL---PEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 +PL P+ E+P AP P P+ T+ P T+++ A Sbjct: 360 LDKNTVPLPNKPKDEIPAVKADKPAPLEAPKTAASNNIPTKEPKTE-TLTKPNTSAETAA 418 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + K+S P A P+ + A P EK Sbjct: 419 TPKP--------HTKESAPKLTRAAIPIEEK---------PKYTAPAPPKEEEKV 456 >UniRef50_C3PJQ2 DNA polymerase III, gamma and tau subunit n=3 Tax=Corynebacterium RepID=C3PJQ2_CORA7 Length = 868 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 169/616 (27%), Positives = 278/616 (45%), Gaps = 28/616 (4%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFA+VVGQE V T L+ L GRI+HAYLFSG RG GKTS AR++A+ LNC Sbjct: 2 ALYRKYRPATFAEVVGQEQVTTPLSAALDAGRINHAYLFSGPRGCGKTSSARIMARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 E G T+TPCGVCD+C + G +D+ E+DAAS VED R+L D YAPA R+++ Sbjct: 62 EQGPTSTPCGVCDSCVSLAPGGPGNLDVTELDAASHNGVEDMRELRDRAYYAPAESRYRI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+S NALLK +EEPPEHV F+ ATT+P+K+ TI SR + + L Sbjct: 122 FIIDEAHMISASGANALLKVVEEPPEHVIFIFATTEPEKIIGTIRSRTHHYPFRLLTPPA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 ++ LE + E++ + ++ +A GS RD LS+ DQ +A +G ++ +L Sbjct: 182 MKGLLERTVASENVHVDDTVYPMVIQAGGGSPRDTLSILDQLLAGAGPDGLTYDVARPLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D+ + +EA+ + + L+++ G + +++L L + ++Q P+A Sbjct: 242 GVTDEGLLDNTIEALASQDKAGLFRLVDDVIEAGHDPRRFAIDLLDRLRDLMILQAVPSA 301 Query: 302 LGNDMAAIELR----MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L + + + A+ + +T+ L A R+ +E+ + Sbjct: 302 LEEGLVSAPTDRGEVLTAQAQRFSGPQLAYLAETVNERVSSLRGATSPRLLLEILCAHLI 361 Query: 358 AFHPRMPLPEPEVPRQSF-----APVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 ++P + P AP T Q A Q P +Q Sbjct: 362 VGAAPAAAAAGQLPTAAPQGAGAQPSAPAGQPTAPAQRQQSAVASAQDPAAAAAAIIAQR 421 Query: 413 LA-------ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA 465 + A+QQ Q K E + P + ++ + + +A+P P Sbjct: 422 RSRQAAKQEAQQQQPLQQPQQAEKAQEAVQQAQQTPAPEDSQPQVPERSAQPEAQPEPQP 481 Query: 466 LEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAA 525 + ++ + +Q E + ++ E+ PE A R W+ Sbjct: 482 EQPKQRQE-----QPERQQQEQHEQQQQEQTEQQEQAREQHPEAEQPQDPAAEIRGRWSD 536 Query: 526 QVSQLSLPKLVEQ--VALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKG 581 + + V + +A D+ + L + +N+ G + + L Sbjct: 537 LRATIGRRNKVAEIMLAEARVLGVRDDTLVLGHTTGALAERINSPGTNEVIVTVLQEELN 596 Query: 582 STVELTIVEDDNPAVR 597 T+++T V +P Sbjct: 597 RTLKVTCVIGTDPKAH 612 >UniRef50_B2V5N0 DNA polymerase III, subunits gamma and tau n=4 Tax=Hydrogenothermaceae RepID=B2V5N0_SULSY Length = 501 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 152/465 (32%), Positives = 240/465 (51%), Gaps = 37/465 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ +RK+RP++F +V+GQEHV+ L N + L R+ HAY+FSG RGVGKT+IAR+L+K Sbjct: 1 MAYEAFSRKYRPKSFQEVIGQEHVVKTLKNAVKLDRVSHAYIFSGPRGVGKTTIARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ + C C+NC EI++G F D+ EIDAAS ++D R + DNV Y P +G++ Sbjct: 61 VLNCKNPVDYESCNQCENCIEIDKGSFPDMYEIDAASNRGIDDIRMIRDNVGYQPIKGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDE HML++ +FNALLKTLEEPP F+LATT+ K+P TI SRC F K Sbjct: 121 KVYIIDEAHMLTKEAFNALLKTLEEPPPRNIFILATTELYKIPETIKSRCQTFIFKPPTK 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI++ L ILN E I +E A++LLA+ EG +RD+ SL DQA+ +G+++ + V + Sbjct: 181 EQIKNYLLRILNNEKIPYEEDAVELLAQELEGGMRDSASLLDQAVTYAEGKLTRKDVEEI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + + + + + LI+ G + ++L +H+ + Sbjct: 241 LGIVPYSYVQKFLRNIKDLKVDENIKLIDTLEDEGYDINVFWKQLLEAIHKTLI------ 294 Query: 301 ALGNDMAAIELRMRELARTIPPTDI-QLYY--QTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +L + + D+ L Y E D + +T+L+ L Sbjct: 295 ---------DLALDKEDEIFSKEDLKSLIYLKTIFTKTYSEARTFFDPKQIYHLTILKTL 345 Query: 358 AF-------------HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 +P EPEV +Q P + Q + P++ Sbjct: 346 YLDSIKRIEQLFAEGVQVVPKKEPEVLKQEIKP------QEKQETKQQEEIKPKEEQKQD 399 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER 449 L + SQ++ + + + + K+ E A + + + + R Sbjct: 400 LNKIISQIIKNEKVIAVIIKNAEIKEDENAVYIKVKSKSEEDILR 444 >UniRef50_C3MC56 DNA polymerase III, subunits gamma and tau n=80 Tax=Alphaproteobacteria RepID=C3MC56_RHISN Length = 645 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 195/650 (30%), Positives = 295/650 (45%), Gaps = 79/650 (12%) Query: 2 SYQVLARKWRPQTFADV-VGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 +Y+VLARK+RP+ F+D+ VGQE ++ L N GRI AY+ +G RGVGKT+ AR+LA+ Sbjct: 39 AYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILAR 98 Query: 61 GLNCETGITATPCGV----CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 LN +T P ++C+ I GR VD+IE+DAAS T ++D R++++ V+Y P Sbjct: 99 ALNYKTAEIDKPTIDLRIPGEHCQAIMDGRHVDVIEMDAASHTGIDDIREIIEQVRYRPV 158 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+KVY+IDEVHMLS +FN LLKTLEEPPEHVKF+ ATT+ +K+P+T+LSRC +F L+ Sbjct: 159 SARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLR 218 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 + + ILN+E + EP AL ++ARAAEGS RD LSL DQAIA G G V + Sbjct: 219 RISASDLVGLFSTILNKEAVRFEPEALAMVARAAEGSARDGLSLLDQAIAHGGGSVEMET 278 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V +MLG D + + L E +V+ + + G +L ++ H + ++ Sbjct: 279 VRSMLGLADRARIVDLFEHIVKGDAAAALGEFAAQYEAGANPTVVLTDLADFTHLVTRMK 338 Query: 297 LSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 P A + + R R E A ++ T + +Q LL G E + EM L+ Sbjct: 339 YVPEAANDQSFSEIERRRGAEFAGSVAVTTLSRIWQMLLKGIPEAESSARPAGAAEMVLI 398 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 R LA +P PE R P P + + Sbjct: 399 R-LAHAAHLPSPEEAARRLLELSGGEAGDGRPA----------------PARTSGNTQAQ 441 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 A Q +Q +S AA + N A + R +V D +E PA+ Sbjct: 442 AGQPVQ--------ARSVEAAPVQRPSANGATMLR--AVPDVAAQPITVGRIEDRPAQAP 491 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 A + + PV ++ A K ++ K + Sbjct: 492 AAKAEPKVPVNSVGDI---------ADLCAKNRDIKLKTL-----------------VRG 525 Query: 535 LVEQVALNAWKEESDNAVCLHLRSSQ-RHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 + + ++L + L N A + L G + + Sbjct: 526 FLR------LVHIEPGRLDVNLSDDAPKTLLNELAVK-----LKEWTG--IHWVVSYSRE 572 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDEESIRP 642 P T +E Q E+++ AR+ D ++ + F A + + IR Sbjct: 573 PGEPTLVEAEQRAQEQRVNDARQ----DPDVAAILARFPGARITDVRIRA 618 >UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK9_MARMM Length = 606 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 181/491 (36%), Positives = 259/491 (52%), Gaps = 12/491 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP TF D++GQ+ ++ L N + GRI HAY+ +G RGVGKT+ ARL+A+ L Sbjct: 32 YQVLARKYRPDTFEDLIGQDAMVRTLTNAFAAGRIAHAYMLTGVRGVGKTTTARLIARAL 91 Query: 63 NCETGITATPC----GVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 N +T P +C I + VD++E+DAASRT V D R++L+ V+YAP Sbjct: 92 NFQTDGIDAPSMALGEKGRHCDAIGRSAHVDVMEMDAASRTGVGDIREILEGVRYAPVSA 151 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDEVHMLS +FNALLKTLEEPPEH KF+ ATT+ +K+PVT+LSRC +F LK + Sbjct: 152 RYKVYIIDEVHMLSTSAFNALLKTLEEPPEHAKFIFATTEIRKVPVTVLSRCQRFDLKRI 211 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG---DGQVSTQ 235 D E + L+ I E + E L L+ARAAEGS+RDALSL DQAI G DG VS Sbjct: 212 DREVLTDHLDRICGLEGASVERDGLSLIARAAEGSVRDALSLLDQAIVQGSDEDGPVSAP 271 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 + MLG D + L L+E + +A ++ G + + ++L +H A V Sbjct: 272 QIRDMLGLADHARVLDLLEQTLTGKTADALAELSSLHDAGGDPVVITRDLLDYVHATARV 331 Query: 296 QLS-PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 + + P A + A R+ LA + ++ LL G ++ APD EMT+L Sbjct: 332 KAAGPGADLGEAADTVARIVTLAEGQTLGQLTRMWKILLTGLDDVRNAPDALAAAEMTVL 391 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 R LA +P PE + P A + + P +P+ AP A + A Sbjct: 392 R-LASAASLPPPEDAARLLAGMPRATSPASGAGEAPGKPEPAPASATGSAS-AAMDRDAA 449 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 A + L + + ++ PA A ++ L D V + A K Sbjct: 450 AHRALSAPEAVAQVEQDAPA--ISGPQTWEALMDLLREKRDIGLQSDVERYVRPAVFKPG 507 Query: 475 AYRWKATTPVM 485 ++ ++ Sbjct: 508 SFTFQPIEDAP 518 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 137/398 (34%), Positives = 212/398 (53%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARK RPQ F ++ GQE V+T L N + +GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 1 MSYIALARKLRPQNFDELSGQEFVVTTLKNSIEMGRVAHAYLFTGPRGVGKTSAARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + + PC C+NC EI G +D++EID AS +++ R+L + V++ P + +F Sbjct: 61 AVNCLEPVGSNPCNKCENCTEITSGTSMDVVEIDGASNRGIDEIRELREAVRFLPVKCKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNALLKTLEEPP++V F+LATTDPQ+LP TI+SRC ++ + Sbjct: 121 KVYIIDEVHMLTEHAFNALLKTLEEPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPF 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ E I ++ AL L+ R ++G +RD+LSL DQ IA G++ Q+ S + Sbjct: 181 EIMYDSLAGAMDTEGIEYDKDALNLVVRNSDGCMRDSLSLLDQIIAFTGGKLDEQSTSFL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L +++ E + I E + +G+ + ++G + M ++ Sbjct: 241 LGFSEKSLVDKLFALIIKEQPEEIPDAIEELSGKGVNFAFATETLIGHTRNLLMQLITKK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + +EL + + +Q +L + + E + +A Sbjct: 301 ENKELTSKENDYYKELVKNTSEQQLYALFQVFQKLLNDLKFFSFEQYIFEFGMYKAANIG 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQ 398 + S V P + Sbjct: 361 SVISSKGLASQTSSDTTGRAATVKKPVAETSSKPTLSS 398 >UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUE6_9DELT Length = 561 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 146/444 (32%), Positives = 233/444 (52%), Gaps = 10/444 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ L ++RPQ FA V GQ+ + + L+ R HAYLFSGTRGVGKT++AR+L+K Sbjct: 1 MAKAGLTARYRPQNFAQVAGQDFIKSILSRAAGQDRPSHAYLFSGTRGVGKTTLARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC G PC C +C +I +G D+ EIDAAS T V++ R L ++V Y+P GR+ Sbjct: 61 AINCYNGPAPEPCNQCSSCEQITRGASPDVWEIDAASHTGVDNVRKLREDVAYSPMSGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV +IDE HMLS +FNALLKTLEEPP H F++ATT P+K P T++SRC + K L Sbjct: 121 KVVIIDEAHMLSTSAFNALLKTLEEPPAHCVFIMATTAPEKFPATVISRCQHYVFKRLTH 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L+ E +++E A+ LL R GS+RD++S+ Q +A GD + T V + Sbjct: 181 GELFAHLCFVLDTEGVSYEKEAVHLLTRRGSGSVRDSMSMLGQVLALGDEGLKTADVRRV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D + L L++ +++ + R+ ++N +G++ L EM + ++ Sbjct: 241 LGLADQELFLRLMQHILDQDLVRLHEMVNYLLEQGLDLGFFLQEMAQCWRNMFLLSQGGQ 300 Query: 301 ALGN--DMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 G D+ A E + RE+A + I +Q +L RK + + + + +E+ L L Sbjct: 301 EAGKVLDLPAEEVEKWREMAGMFAASTIHAGWQMVLESRKSILGSYEPGISLELMLY-NL 359 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 A+ P + +P +AP T + A + ++ TS + Sbjct: 360 AYLPEL------IPVSGYAPEPQPRGETRQNTAEKKYPAGGEKKSLNNEYKTSSSPGEPE 413 Query: 418 QLQRVQGATKAKKSEPAAATRARP 441 + + + + A +P Sbjct: 414 VVTENFQEFQDRGEDKAEVQEEKP 437 >UniRef50_C6HVG4 DNA polymerase III, subunits gamma and tau n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVG4_9BACT Length = 576 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 167/482 (34%), Positives = 247/482 (51%), Gaps = 12/482 (2%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 M+ + LAR +RP+TF+D++GQE V+ +L GLS G + AYLFSG RGVGKT++AR+LA Sbjct: 1 MAKFASLARLYRPRTFSDLIGQEAVVRSLTRGLSSGVMTQAYLFSGERGVGKTTVARILA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 K +NC++G TATPC C +C EI +GR D+ E+D AS T V+D R L +++ YAP R Sbjct: 61 KAINCQSGPTATPCLECSSCLEIAEGRSPDVTEMDGASHTGVDDVRTLRESLVYAPLTSR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 ++ +IDEVHMLS +FNALLKTLEEPP HV F+LATT+ K+P T+LSRC F + L Sbjct: 121 SRIVIIDEVHMLSTSAFNALLKTLEEPPPHVVFILATTEAHKIPDTVLSRCQHFRFRLLT 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V QI ++ H+ E+I+ P ++ARAAEGSLRDALSL DQ + +G ++ V+ Sbjct: 181 VSQISDRILHVCRSENISLNPTVTGMVARAAEGSLRDALSLLDQLLRTGGESLTPADVAD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D ++ A++ + + A G++ A + + I L Sbjct: 241 LLGVTDHALEEKMLAAILLGDLSATLRTARTALDTGVDPRAQVRSLARRFRDILHSTLDG 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQ---TLLIGRKELPYAPDRRMGVEMTLLRA 356 +L + + + PP +I Q L+ G +L +P + E+ L R Sbjct: 301 TSLDSPIYGWIPESVQALPLDPPPNIFFLEQALSVLVKGEDDLRRSPQPAITFELLLARL 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP--ETTSQVLA 414 +PLPE A + +P+ V +P PLP E ++V Sbjct: 361 CHLREVLPLPE------ILAKIGVAGATSPSSVRSLGPKTHNSSPPTPLPTTEVPTEVFP 414 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + + +Q A + P A R S A + S + + Sbjct: 415 SPPEESSLQQAMPQEIPAPVDDGPLDLRIPADWPRALSRLPHEMAALLESVRTRRIEQNT 474 Query: 475 AY 476 Y Sbjct: 475 LY 476 >UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q394_9BACT Length = 558 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 136/357 (38%), Positives = 207/357 (57%), Gaps = 1/357 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLAR++RPQTF+D+VGQ ++ L N + R+ HAYLF+G RGVGKTS AR+L+K Sbjct: 1 MSYVVLARRYRPQTFSDIVGQAPIVKTLGNAIRTDRVAHAYLFAGPRGVGKTSTARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC VC+ C+ I +G +D++EID AS +++ R++ NV +AP+R R+ Sbjct: 61 ALNCVNGPTDTPCNVCNICQSISEGSDIDVLEIDGASNRGIDEIRNIRQNVGFAPSRARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++Y+IDEVHML+R +FNALLKTLEEPP HVKF+ ATT +LP T+ SRC +F K + V Sbjct: 121 RIYIIDEVHMLTREAFNALLKTLEEPPSHVKFIFATTAANRLPETVQSRCQRFDFKNISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I E E AL +A+ A+G LRD+ S+ DQ + D V++ V+ + Sbjct: 181 NDIEKHLLEICKTEGKQIESAALHTIAKYAKGGLRDSQSVLDQLFSFCDDNVTSADVNYV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DDD+ S+ E V + + ++++ G + ++L L + + Sbjct: 241 LGYIDDDKIYSMFECFVNKDTSGALRIVDDILNEGKTPAEFIDQLLLRLRDLLVFSSCGQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 E ++ ++ + Q L + R + +R+ EM +++ Sbjct: 301 EAVW-AEYDESFIQRFEKSFSGDTLMYMIQMLSVMRIRSTDSLLQRISAEMAIIKLC 356 >UniRef50_C3J7N6 DNA polymerase III, subunit gamma and tau n=2 Tax=Bacteria RepID=C3J7N6_9PORP Length = 594 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 159/481 (33%), Positives = 232/481 (48%), Gaps = 20/481 (4%) Query: 1 MS--YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLL 58 MS + V ARK+RP +F ++GQE V L + + HAYLF G RGVGKTS AR+ Sbjct: 1 MSEKFVVSARKFRPDSFESLLGQEAVSETLRRAILQQKTAHAYLFCGPRGVGKTSAARIF 60 Query: 59 AKGLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 A+ +NC + + CG CD+CR + R ++ E+DAAS D R L++ V P Sbjct: 61 ARAINCASPLASGEACGECDSCRAFAEQRSFNVFEMDAASNNSANDIRQLIEEVNIPPQV 120 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 GR+K+Y+IDEVHMLS +FNA LKTLEEPPE+V F++ATT+ QK+ TILSRC F K Sbjct: 121 GRYKIYIIDEVHMLSTAAFNAFLKTLEEPPEYVVFIMATTEKQKILPTILSRCQVFDFKP 180 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + + I QL HI E I E +AL+L+AR A+G +RDALS+ D+ + DG+VS Sbjct: 181 IPSDVIIGQLRHIAQLEEIQVEEKALELIARKADGGMRDALSVFDRIASYTDGEVSYSRT 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-- 295 L LDDD V+ +V + + L++E RG + +++ + L + + Sbjct: 241 LESLNILDDDYYFRFVDLLVHNDYASTLLLLDELIMRGFDPRTIVLGLTDFLRNLLLAFD 300 Query: 296 -QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 Q P L + E +LA+ + L+ KE + +R+ VEMTLL Sbjct: 301 PQTLP--LLHLTKETEASYNQLAQASGRGFLYQAIAKLMECLKEYRNSNAKRLLVEMTLL 358 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 + + A P TP PP S P+ + Sbjct: 359 SLTSLAQE----------RVSASHTPNQRPTPAATPPSAPSPVAAPRPQPIAAPAPARPS 408 Query: 415 ARQQLQRVQGATKAKKS--EPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 A ++ +T+A +S P A + +A KAP + Sbjct: 409 APPTPRQTGASTEAPQSIDLPKPPPTASMAAPRPVAPAPRPAVAPSPTATSAAAPKAPTQ 468 Query: 473 K 473 + Sbjct: 469 E 469 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 135/361 (37%), Positives = 216/361 (59%), Gaps = 7/361 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L +K+RPQTF +VGQ+ ++ L+N + RI HAYLF+G RG GKTS AR+ AK + Sbjct: 4 YEPLYQKYRPQTFDGLVGQKSIVLTLSNAIRSQRISHAYLFTGPRGTGKTSTARIFAKSI 63 Query: 63 NCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 NC + +PCG C+ C+ I +G +D+IEIDAAS T V++ R++++ ++AP + R+ Sbjct: 64 NCLASDAPSISPCGNCEACQTINKGSSLDVIEIDAASNTGVDNIREIIEQAKFAPMQLRY 123 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y++DE HMLS +FNALLK LEEPP+HV F+LATTDPQ++ TI+SRC +F + + + Sbjct: 124 KIYIVDECHMLSTAAFNALLKILEEPPKHVIFILATTDPQRVLPTIISRCQRFDYRRIAI 183 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L I EE+I E AL L+A+ + G LRDA SL DQ ++ G+++++ V+ + Sbjct: 184 EEIVQHLGKIAKEENINIEIDALNLVAKISNGGLRDAESLLDQ-LSLFTGKINSEKVNDL 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + LSL++A+ N + ++ + +G E +L + + + ++SP Sbjct: 243 VGLISERDLLSLLQAIRSNNSKLIIEFCGQLINKGKEPLTILQNIANFHLNLLISKVSPQ 302 Query: 301 ALGNDMAAIELRMREL---ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 M + ++ +EL A I Q L +L + +E+ LL L Sbjct: 303 CPELTMISKDI-WKELCIEAEFWKTDRILKNQQKLRNSEIQLKSTTQPYLWIEIILLDLL 361 Query: 358 A 358 Sbjct: 362 Q 362 >UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfovibrio RepID=B8DQU3_DESVM Length = 688 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 139/348 (39%), Positives = 203/348 (58%), Gaps = 3/348 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RPQTFA+V GQE V L+ + R+ AYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE T PC C+ CR++ G VD++EID AS +ED R L + + YAP GR+ Sbjct: 61 ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F K L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L E +P A++L+AR A GS+RD++SL Q +A G +++ + + Sbjct: 181 NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +++A+ + V A++ + +G++ L E+ + M++ + Sbjct: 241 LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE 300 Query: 301 AL--GNDMAAIELRMR-ELARTIPPTDIQLYYQTLLIGRKELPYAPDR 345 A D+ E R E A T I +Q L G++ + + + Sbjct: 301 AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEP 348 >UniRef50_Q022F8 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022F8_SOLUE Length = 568 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 146/370 (39%), Positives = 222/370 (60%), Gaps = 2/370 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQV+ARK+RPQ+FADV+ QEHV T L N ++ RI H Y+FSG RG GKT+IAR+LA+ L Sbjct: 2 YQVIARKYRPQSFADVICQEHVKTTLENAIAQHRIAHGYIFSGQRGTGKTTIARILARCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G TATPCGVC +C+EI +G VD+IEIDAAS + + R+L +NV+Y PAR R+K+ Sbjct: 62 NCVQGPTATPCGVCASCKEISEGGTVDVIEIDAASNRGINEMRELRENVRYQPARDRYKI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE H ++ +FNALLKT+EEPPE F+L TT+ K+P TI SRC F +++D ++ Sbjct: 122 FIIDEAHQITNEAFNALLKTIEEPPEWAVFVLCTTESHKIPATIASRCQHFSFRSVDFQE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + ++ I +E I + AL +LA A EGS+RD+LS DQAIA +++ V A+LG Sbjct: 182 LVDRMSWICGQEGIEADAEALAVLAAAGEGSVRDSLSALDQAIACCGAKITAPEVRALLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA- 301 + + EA+ ++ +++E G + E+ + + +++ A Sbjct: 242 AFSLESLEKVTEALAAGESRMMLEVVDELERNGQNLQHFSRELSRYFRNLLVTRIAGADT 301 Query: 302 -LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L AA ++ +A D+ Y Q L ++L ++ R +E+ L+R + Sbjct: 302 RLVAASAAQREKLGHIAGQFSEEDLSRYLQLSLDIFRDLQFSLQPRFHLEIGLVRLVQAG 361 Query: 361 PRMPLPEPEV 370 +P+ E Sbjct: 362 RLLPIEEALA 371 >UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella RepID=B0TVX0_FRAP2 Length = 551 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 170/362 (46%), Positives = 242/362 (66%), Gaps = 1/362 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ LARK+RPQ+F++V GQ+H L +L + L ++HHAYLF+GTRGVGKT++ RLLAK Sbjct: 1 MSYQALARKYRPQSFSEVAGQQHALNSLVHALETQKVHHAYLFTGTRGVGKTTLGRLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+TG+TA PC C+NC I F+DLIEIDAASRT VE+T+++LDN+QY P++GR+ Sbjct: 61 CLNCKTGVTAEPCNKCENCLAINNNSFIDLIEIDAASRTGVEETKEILDNIQYMPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPE+VKF+LATTD K+PVTILSRC+Q HLK + Sbjct: 121 KVYLIDEVHMLSKQSFNALLKTLEEPPEYVKFILATTDYHKIPVTILSRCIQLHLKHISQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+ QL+ +LN+E+I+ + ++L +A A+GSLRDALSL DQAI+ G++ + M Sbjct: 181 SDIKDQLKVVLNKENISSDEQSLDYIAYHAKGSLRDALSLLDQAISFCSGELKQAQIKQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D ++ +++EA++E N V+ + +A+L + + + + Sbjct: 241 LGIIDSEEVYNIIEAIIENNPSAVLPAVKNLTLTESNADAVLDRIAEIWFACCIYSFT-Q 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +L + ++ I YQ + +K++ AP GV M +LR +AF Sbjct: 300 SLDAINDIDIDIINKVLDKISIEQAHFLYQLTITAKKDISLAPSFETGVTMAVLRLIAFQ 359 Query: 361 PR 362 + Sbjct: 360 KK 361 Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 14/126 (11%) Query: 522 PWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNN--RGAQQKLAEALSM 578 W ++ + L + +A N+ E+++ + L + + + KL A+S Sbjct: 429 KWFNLLNAIKLNGFTKTLAFNSHLINETNDTFEIQLNEDAKKILELEPQSIAKLQSAISQ 488 Query: 579 LKGST-VELTI---VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAE 634 S L I +N ++P E K A + I D N++ ++ + Sbjct: 489 HLDSPGFRLDIRNLPTSNNSNHKSPAEI-------KRENAVKKIHNDQNVKLIKESLAIQ 541 Query: 635 LDEESI 640 ++ E I Sbjct: 542 INNEDI 547 >UniRef50_Q89A95 DNA polymerase III subunit gamma n=42 Tax=Enterobacteriaceae RepID=DPO3X_BUCBP Length = 370 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 182/365 (49%), Positives = 272/365 (74%), Gaps = 3/365 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y +LA+KWRPQTF DV+GQ+++++A++N L LGRIHHA+LF G RG GKT+IAR+LAK Sbjct: 1 MNYHILAKKWRPQTFNDVIGQQYIVSAISNSLLLGRIHHAWLFFGIRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GI+ PC C NC E+EQG F+DL E+DAASRTKVED ++LLDN++Y P++GRF Sbjct: 61 SLNCKLGISPNPCRKCSNCVEVEQGNFIDLYEVDAASRTKVEDMKELLDNIRYLPSKGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLSR+SFN LLK +EEPP+H+KF+LATT+ +K+P TILSRCLQF LK +++ Sbjct: 121 KIYLIDEVHMLSRYSFNFLLKNIEEPPQHIKFILATTNLEKIPDTILSRCLQFQLKPINL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I + +IL++E+I +E +AL L+++ +EGSLRDA++LT+Q I+ G G ++ + V Sbjct: 181 NEIVACISNILHKENITYEIKALSLISQKSEGSLRDAITLTEQMISMGKGNITEKIVRKT 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L +DQ L ++ ++ + + ++ + I +E +LVE+L LLH+I+++++ P+ Sbjct: 241 LGMLYEDQILYILTTLLNKDLKNLVLCFKYISDTHINFENILVEILQLLHQISIIKIIPS 300 Query: 301 ALGNDM---AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 ND ++ ++++A DI LYYQT L+G+KEL APD+++ +EMTLLR Sbjct: 301 IKLNDTKYSKNMQHAIQKIAELSNYNDIYLYYQTALLGKKELHIAPDQKISIEMTLLRMF 360 Query: 358 AFHPR 362 + + Sbjct: 361 NLNTK 365 >UniRef50_B2ICM3 DNA polymerase III, subunits gamma and tau n=3 Tax=Rhizobiales RepID=B2ICM3_BEII9 Length = 651 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 169/482 (35%), Positives = 252/482 (52%), Gaps = 25/482 (5%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y VLARK+RP F D++GQE ++ L+N L RIH AYL +G RGVGKT+ AR+LA+ Sbjct: 29 YLVLARKYRPSRFEDLIGQEAMVKTLSNAFDLDRIHQAYLLTGVRGVGKTTTARILARAF 88 Query: 63 NCE------TGITATPCGVCD----NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 N E P D +C+ I + R VD+IE+DAAS T ++D R+++++ + Sbjct: 89 NYEVPAENGQPAIEKPTVHMDRFGVHCQAIIESRHVDIIEMDAASHTGIDDIREIIESAR 148 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P R KVY+IDEVHMLS+ +FN LLKTLEEPPEHVKF+ ATT+ K+P+T+ SRC + Sbjct: 149 YRPVSARVKVYIIDEVHMLSKQAFNGLLKTLEEPPEHVKFIFATTEIDKVPITVRSRCQR 208 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ- 231 F L+ ++ + L + +E++ E AL L+ARAAEGS+RDALSL DQAIA G GQ Sbjct: 209 FDLRRIEPAVLIDYLASVCAKENVLIEREALGLIARAAEGSVRDALSLLDQAIAHGTGQA 268 Query: 232 --------VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLV 283 +S + AMLG D + + L EA++ + + +A + G + +LV Sbjct: 269 DPHSSAQPISATDLQAMLGLADRARIIDLFEAVMRGDMAKALADLKNLHDCGADPAQVLV 328 Query: 284 EMLGLLHRIAMVQLSPAALGNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYA 342 E+ +H + ++LSP EL R +A T+ + +Q L G +E+ + Sbjct: 329 ELAEFVHFVTRLKLSPHTFDAAATPEELSRGGAMAGTLSVMVLTRAWQILTKGLQEVKDS 388 Query: 343 PDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP----QPQSAPQ 398 P +M L+R LA+ +P P+ + + + P +P T QP Sbjct: 389 PRPLACADMVLVR-LAYAADLPTPDVVLRQLAKTPPSPHGRDGSTDAVSGSRVQPSLPSA 447 Query: 399 QAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQ 458 P++ P TS L A+ Q S P+ L+ ++ Sbjct: 448 SGPSLGSPLVTSSRLGAQAATQAASHMAPLAVSAPSLQPGLAQAPAIRLQSFGALVALAG 507 Query: 459 AR 460 + Sbjct: 508 EK 509 >UniRef50_D2BCW3 DNA-directed DNA polymerase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BCW3_STRRD Length = 727 Score = 454 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 142/364 (39%), Positives = 203/364 (55%), Gaps = 8/364 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L RK+RP TFA+V GQEHV L L GRI+HAYLFSG RG GKTS AR+LA+ Sbjct: 1 MS-LALYRKYRPGTFAEVKGQEHVTEPLRQALRSGRINHAYLFSGPRGCGKTSSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIE--QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T PCG C++C + +D+IEIDAAS V+D RDL + +AP Sbjct: 60 SLNCEKGPTPDPCGECESCVALAPTGPGHLDVIEIDAASHGGVDDARDLRERAFFAPVSA 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y+IDE HM++R FNALLK +EEPP H+KF+ ATT+P+K+ TI SR + + + Sbjct: 120 RFKIYIIDEAHMVTREGFNALLKLVEEPPPHLKFVFATTEPEKVIGTIKSRTHHYPFRLI 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAV 237 +R +E IL E + EP AL L+ RA GS RD+LS+ DQ A D ++ Sbjct: 180 PPTALRTLMEEILTSEKVPFEPAALPLVVRAGAGSARDSLSILDQLFAGSDEAGITYARA 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 ++LG D D ++ A +G +V +N G + +++L + ++ Sbjct: 240 VSLLGYTDGDLLDDVIAAFAARDGAQVFQAVNRVIEGGHDPRRFAMDLLERFRDLVILAN 299 Query: 298 SPAALGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A G+ + A R++ A ++ P ++ + G E+ A R+ +E+ Sbjct: 300 VPEAAGSGLLDRPADELERLQAQAVSMGPAELTRAAEIFNAGLTEMRGAASPRLLLELMC 359 Query: 354 LRAL 357 R L Sbjct: 360 ARTL 363 >UniRef50_Q1GKB7 DNA polymerase III subunits gamma and tau n=4 Tax=Rhodobacteraceae RepID=Q1GKB7_SILST Length = 608 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 157/377 (41%), Positives = 235/377 (62%), Gaps = 8/377 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+TFAD+VGQ+ ++ L N + RI A++ +G RG GKT+ AR++AKG+ Sbjct: 17 YQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTARIIAKGM 76 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G T PCG C++C I +GR VD++E+DAASRT V D R+++D+V Y A Sbjct: 77 NCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDIREIIDSVAYRAAS 136 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+K+Y+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 137 ARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRR 196 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ E + L I E AL L+ RAAEGS RDA SL DQAI+ G G+ + V Sbjct: 197 IEPEVMIDLLRRIATSEQAEIADDALALITRAAEGSARDATSLLDQAISHGAGETTADQV 256 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 AMLG D + L L++ ++ + + ++ A G + A+L ++ + H +++V++ Sbjct: 257 RAMLGLADRGRVLDLMDMILRGDAAAALTELSAQYAEGADPMAVLRDLAEITHWVSVVKI 316 Query: 298 SPAALGNDM--AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P A + R +++A +P + +Q LL +E+ AP+ M EM ++R Sbjct: 317 TPDAAEDPTISPDERARGQDMAARLPMRVLTRMWQMLLKALEEVAAAPNAMMAAEMAVIR 376 Query: 356 ALAFHPRMPLPEPEVPR 372 L +P PE + + Sbjct: 377 -LTHVADLPSPEELLRK 392 >UniRef50_Q1MPV7 DNA polymerase III, gamma/tau subunits n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MPV7_LAWIP Length = 574 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 181/660 (27%), Positives = 291/660 (44%), Gaps = 106/660 (16%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M LA ++RPQ+F +VVGQE V L+ + ++ AYL SGTRGVGKT+IAR+ AK Sbjct: 1 MKQVSLAIRYRPQSFKEVVGQEIVKKILSRAAAESKVVPAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ TA PC C+ C+ I +G VD++EID AS V+D R L +++ YAP GR+ Sbjct: 61 ALNCQQAPTAEPCNTCEQCKRITKGIHVDVVEIDGASNRGVDDARRLRESIAYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R SFNALLKTLEEPP F+ ATT+P K PVTI+SRC F LK L Sbjct: 121 KVFIIDEAHMLTRESFNALLKTLEEPPPFSTFVFATTEPHKFPVTIISRCQHFVLKPLTK 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ + L H+L +E+I +E A+QL+AR A GS+RD++SL Q + +G ++ V + Sbjct: 181 EELIYNLIHVLKQENICYEDNAIQLIARRASGSIRDSMSLLGQTLMFSNGILTENVVRNV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + L+ A + N E V+ L +G++ L E L + +++ Sbjct: 241 LGLAEQEFYEKLLRAFKDQNYEEVVKLNQILLEKGVDLGFFLREFATLWRNLFLLRKVSK 300 Query: 301 ALGN---DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 N + R+ LA P + +Q +L ++++ + Sbjct: 301 LDANMLGMLPDEIPRLTSLANLFEPIYLHAAWQMVLENQRQI----------------LM 344 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + P PVA + + P S Q + + +TS Sbjct: 345 SLEP---------------PVALELLFLNLTLLPHLVSLEQISNGLAALSSTSLETEISN 389 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 +L+ KK +A+T + ++N + Sbjct: 390 KLRDNS----MKKDVISASTESESISNTKFQ----------------------------- 416 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 V++ + K +K + + ++ E W + S Sbjct: 417 -NEYQEVVEGDLQFISVKDVKSKRDTISSSMNEGEIIEEP----TWEGFLQYCSKNGST- 470 Query: 538 QVALNAWKEE------SDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIV 589 +N + N + + + S L + +KL E + G + ++ Sbjct: 471 ---INTYFLNKLTGIFQQNTLVITVDSQFLYEKLISDKL-EKLYELVHNYAGEKYTVQLI 526 Query: 590 EDDNP-AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES------IRP 642 E N + T + ++ I++ IQ L++ FDAEL + I+P Sbjct: 527 EPKNTFKLET--------------EIKKDIVSHPVIQILQQTFDAELLRCTPTTNLHIKP 572 >UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 Tax=Clostridia RepID=A4XJ39_CALS8 Length = 535 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 2/454 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + L RK+RP+ F DVV QEH+ L N + ++ HAY+F+G RG GKT+ A+++A+ + Sbjct: 2 HIALYRKYRPKVFEDVVAQEHITKTLKNQIKQDKVAHAYIFTGPRGTGKTTTAKIMARAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I + +D++EIDAAS T V D R + D V+Y P+ + +V Sbjct: 62 NCLNPKDGNPCNECEVCQSILNEKTLDVLEIDAASNTSVNDVRQIRDEVRYPPSMCKRRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP H F+LATTD QK+P TILSRC +F K + V+ Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPAHALFILATTDIQKVPATILSRCQRFDFKRISVKD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L+ ++ E I+ + +AL L+++ AEG+LRDAL++ ++ + + D +S + V+ +LG Sbjct: 182 IYERLKKVVELEKISIDDQALYLISQKAEGALRDALTILERCVNTSDEHISYKFVANLLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + A+VE + + + ++N G++ L E + +L +++L + Sbjct: 242 VTSTEIVKEYLNAIVENDSNKGLRVVNRLWDEGMDVNTFLEESIKILRNALILRLGAQNV 301 Query: 303 GNDMAAIELRM-RELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 DM + L+ + I + L+ ++ + ++ +E+ ++ Sbjct: 302 LLDMMDEDKSFVTNLSNLLDSNRIVSVIKMLIDTANQIRWTRFPKVLLEINTIKLCDMQM 361 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 + + P+ + ++ + + E + ++++ Sbjct: 362 DTSFEGLNERVKKLEIKLSQILENPSLLQSL-KTEKTLSLSTAAGEKSGSSEVNKEKMLL 420 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTD 455 A A L ++ Sbjct: 421 PDADVSEVLERWAEVKEAVKEEKPGLSQVLQSAS 454 >UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR2_METI4 Length = 618 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 152/474 (32%), Positives = 241/474 (50%), Gaps = 14/474 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQV +RK+RP+ F++VVGQEHV+ L N + LGR+ HAYLFSG RG GKT++AR+LAK L Sbjct: 16 YQVFSRKYRPRVFSEVVGQEHVVRTLKNAIRLGRVAHAYLFSGPRGTGKTTLARILAKSL 75 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G A C +I+ GR +D IEID AS V+ R+L + + P + R+K+ Sbjct: 76 NCADGPNADFDPDDPICLDIDAGRSLDCIEIDGASNNGVDQVRELREAAKSLPVQSRYKI 135 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML++ +FNALLK LEEPP HVKF+ ATT+P K+P T+ SRC +FH K + Sbjct: 136 YIIDEVHMLTQAAFNALLKILEEPPAHVKFIFATTEPYKIPPTVSSRCQRFHFKRIPRRL 195 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I +E I E +AL+++A +EG+LRDA DQ I+ ++ +V M G Sbjct: 196 IADHLQKICIQEKIDAERKALEMIADISEGALRDAEVALDQLISFYGEKIDQSSVQEMFG 255 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + L+ + + +G + ++ G + +LL LLH IA+ S +L Sbjct: 256 LVGIEPLCRLLTDLAQGDGRGALKEAHQLLESGKDPLSLLRSFRNLLHDIALYMASVESL 315 Query: 303 GNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 G ++ EL ++R ++ + + + + + +L YA + + E+ +L Sbjct: 316 GLELDPEELDQVRSMSSRLSLSFVINLLEAIDQWENKLRYALHKEVLFEIAILELSQLKE 375 Query: 362 RMPLPEPEVPRQSFAPVAPT---AVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 ++ + E + + T PP P+ ++ LP+ + A Sbjct: 376 KVAIEELLAQWRVQGEESSENLKGEKTALSTPPLPEEQGKKEEETTLPQALFPSVQAGNP 435 Query: 419 LQRVQGA----------TKAKKSEPAAATRARPVNNAALERLASVTDRVQARPV 462 + T+ K+ A P + E+ A + + A Sbjct: 436 PSGTKEQPQGGSLTPVGTQKKEQTAAELFSHSPPPLSPQEQWAKLVESFAADKA 489 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enter... 717 0.0 UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 T... 650 0.0 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 624 e-177 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 620 e-176 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 606 e-172 UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase... 598 e-169 UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pa... 598 e-169 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 587 e-166 UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fi... 587 e-166 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 581 e-164 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 578 e-163 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 578 e-163 UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxaloba... 576 e-163 UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 T... 575 e-162 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 574 e-162 UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Ta... 574 e-162 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 566 e-160 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 566 e-160 UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, puta... 565 e-159 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 565 e-159 UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax... 564 e-159 UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Ta... 564 e-159 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 564 e-159 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 563 e-159 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 563 e-159 UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 T... 562 e-158 UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 ... 561 e-158 UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Ta... 559 e-157 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 557 e-157 UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 T... 554 e-156 UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Ta... 551 e-155 UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionac... 551 e-155 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 549 e-154 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 543 e-153 UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 T... 542 e-152 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 539 e-151 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 539 e-151 UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pas... 537 e-151 UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Ba... 535 e-150 UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Co... 533 e-150 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 529 e-149 UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 T... 528 e-148 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 524 e-147 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 523 e-147 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 522 e-146 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 522 e-146 UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Ba... 521 e-146 UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 T... 520 e-146 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 519 e-145 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 517 e-145 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 516 e-144 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 514 e-144 UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA ... 514 e-144 UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 T... 514 e-144 UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibriona... 513 e-144 UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Ta... 513 e-143 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 512 e-143 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 510 e-143 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 510 e-143 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 510 e-143 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 509 e-142 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 508 e-142 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 508 e-142 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 507 e-142 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 507 e-142 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 506 e-141 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 506 e-141 UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 ... 504 e-141 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 504 e-141 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 503 e-141 UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 T... 502 e-140 UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderi... 501 e-140 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 501 e-140 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 501 e-140 UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propion... 501 e-140 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 500 e-140 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 500 e-140 UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 T... 500 e-140 UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotro... 499 e-139 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 499 e-139 UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunit... 499 e-139 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 499 e-139 UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Ta... 499 e-139 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 499 e-139 UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 T... 499 e-139 UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 ... 498 e-139 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 498 e-139 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 498 e-139 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 498 e-139 UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Ta... 498 e-139 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 498 e-139 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 498 e-139 UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 T... 497 e-139 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 497 e-139 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 497 e-139 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 496 e-139 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 496 e-138 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 496 e-138 UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=C... 496 e-138 UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Ta... 495 e-138 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 495 e-138 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 495 e-138 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 495 e-138 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 495 e-138 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 495 e-138 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 495 e-138 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 495 e-138 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 495 e-138 UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobac... 494 e-138 UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter s... 494 e-138 UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiob... 494 e-138 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 494 e-138 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 493 e-138 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 493 e-138 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 493 e-138 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 493 e-138 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 493 e-137 UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase... 492 e-137 UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymera... 492 e-137 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 492 e-137 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 492 e-137 UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 T... 492 e-137 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 491 e-137 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 491 e-137 UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Ta... 490 e-137 UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Co... 490 e-137 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 490 e-137 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 489 e-136 UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Ta... 489 e-136 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 489 e-136 UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 T... 489 e-136 UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 T... 489 e-136 UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 489 e-136 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 488 e-136 UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 T... 488 e-136 UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymera... 487 e-136 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 487 e-136 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 486 e-135 UniRef50_D2R5L2 DNA polymerase III, subunits gamma and tau n=1 T... 486 e-135 UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, puta... 486 e-135 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 486 e-135 UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=ce... 486 e-135 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 486 e-135 UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 485 e-135 UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 T... 485 e-135 UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax... 485 e-135 UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Be... 484 e-135 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 484 e-135 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 484 e-135 UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 ... 483 e-135 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 483 e-134 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 483 e-134 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 482 e-134 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 482 e-134 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 482 e-134 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 482 e-134 UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 T... 482 e-134 UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydroba... 481 e-134 UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 T... 481 e-134 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 481 e-134 UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Pl... 480 e-134 UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 ... 480 e-134 UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Mi... 479 e-133 UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 T... 479 e-133 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 479 e-133 UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 T... 479 e-133 UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 478 e-133 UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymera... 477 e-133 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 477 e-133 UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 T... 477 e-133 UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Ba... 476 e-132 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 476 e-132 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 476 e-132 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 476 e-132 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 476 e-132 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 476 e-132 UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Cox... 476 e-132 UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsi... 474 e-132 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 474 e-132 UniRef50_D1A8C7 DNA polymerase III, subunits gamma and tau n=1 T... 473 e-132 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 473 e-132 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 473 e-131 UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymera... 473 e-131 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 472 e-131 UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragm... 472 e-131 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 472 e-131 UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau... 472 e-131 UniRef50_B1XPA0 DNA-directed DNA polymerase III chain dnaX n=2 T... 471 e-131 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 471 e-131 UniRef50_C3PJQ2 DNA polymerase III, gamma and tau subunit n=3 Ta... 471 e-131 UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits... 471 e-131 UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=The... 470 e-131 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 470 e-131 UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Ta... 469 e-130 UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 T... 469 e-130 UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteob... 469 e-130 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 469 e-130 UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 T... 469 e-130 UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunit... 468 e-130 UniRef50_Q9RKL5 DNA polymerase III subunit gamma n=10 Tax=Strept... 468 e-130 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 468 e-130 UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Ta... 468 e-130 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 468 e-130 UniRef50_A6GJ36 DNA polymerase III, gamma and tau subunits n=1 T... 468 e-130 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 467 e-130 UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bac... 467 e-130 UniRef50_D1S8R6 DNA polymerase III, subunits gamma and tau n=1 T... 467 e-130 UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 T... 467 e-130 UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax... 467 e-130 UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 T... 467 e-130 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 466 e-130 UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 T... 466 e-129 UniRef50_Q0RT17 DNA polymerase III subunit gamma (Partial match)... 466 e-129 UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 T... 466 e-129 UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau ... 465 e-129 UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=De... 465 e-129 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 465 e-129 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 465 e-129 UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 T... 465 e-129 UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Ta... 464 e-129 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 464 e-129 UniRef50_C2GJF4 DNA polymerase III subunits gamma and tau n=1 Ta... 464 e-129 UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 T... 464 e-129 UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 T... 462 e-128 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 462 e-128 UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, puta... 462 e-128 UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 T... 462 e-128 UniRef50_B6WWA6 Putative uncharacterized protein n=1 Tax=Desulfo... 461 e-128 UniRef50_A8LYH3 DNA polymerase III, subunits gamma and tau n=8 T... 461 e-128 UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 T... 460 e-128 UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Me... 460 e-128 UniRef50_C5BXR7 DNA polymerase III, subunits gamma and tau n=1 T... 460 e-128 UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 T... 460 e-128 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 460 e-127 UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Ta... 458 e-127 UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 T... 457 e-127 UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Ato... 457 e-127 UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alp... 457 e-127 UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococca... 456 e-126 UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 ... 456 e-126 UniRef50_C2L1L6 DNA-directed DNA polymerase n=1 Tax=Oribacterium... 456 e-126 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 455 e-126 UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 T... 455 e-126 UniRef50_Q4JSL3 DNA polymerase III, gamma and tau subunits n=10 ... 455 e-126 UniRef50_A8SL11 Putative uncharacterized protein n=1 Tax=Parvimo... 455 e-126 UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacte... 454 e-126 UniRef50_C4FVD6 Putative uncharacterized protein n=1 Tax=Catonel... 454 e-126 UniRef50_B1VIS6 DNA polymerase III, gamma and tau subunits n=10 ... 454 e-126 UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ru... 454 e-126 UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacter... 453 e-126 Sequences not found previously or not previously below threshold: >UniRef50_P06710 DNA polymerase III subunit gamma n=112 Tax=Enterobacteriaceae RepID=DPO3X_ECOLI Length = 643 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 643/643 (100%), Positives = 643/643 (100%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM Sbjct: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA Sbjct: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH Sbjct: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ Sbjct: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA Sbjct: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA Sbjct: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL Sbjct: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI Sbjct: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 >UniRef50_D0ZED4 DNA polymerase III, subunits gamma and tau n=2 Tax=Enterobacteriaceae RepID=D0ZED4_EDWTE Length = 689 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 445/652 (68%), Positives = 513/652 (78%), Gaps = 9/652 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK Sbjct: 38 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 97 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCGVCDNCREIEQGRFVDL+EIDAASRTKVEDTRDLLDNVQYAPARGRF Sbjct: 98 GLNCETGITATPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF 157 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQFHL+ALD Sbjct: 158 KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLRALDH 217 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR QLE I + E + EPRALQLLARAAEGS+RDALSLTDQAIA G GQ++ AVS M Sbjct: 218 EQIRAQLEKIAHAEALTAEPRALQLLARAAEGSMRDALSLTDQAIAMGQGQITADAVSQM 277 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLDD+Q L+L+EA+ A+G VMA + +AA RG++WE LLVEML LLHR+AM+QL P+ Sbjct: 278 LGTLDDEQPLALIEALTAADGTLVMARVEQAAGRGVDWENLLVEMLALLHRVAMLQLLPS 337 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + AA+E R+RELAR +PP D+QL+YQ LL GRKEL +APDRRMGVEMTLLRALAFH Sbjct: 338 ALDSQFAAVEPRLRELARMLPPADLQLFYQILLNGRKELAFAPDRRMGVEMTLLRALAFH 397 Query: 361 PRM----PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV----PLPETTSQV 412 P+ P P P + P P V P P + +PE+T+Q+ Sbjct: 398 PKAVIAEPSPAPSAAQGGDIPAVPATVAQRVAPPSPATVPPTVSAPPQAASAVPESTAQL 457 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 L AR +L++ K AA + ++ALERLAS+++R Q + + E+A + Sbjct: 458 LQARSRLRQKAAGGSEPKKSEPAAPQRAQPASSALERLASISERGQQKIASAEQEQASTR 517 Query: 473 KEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSL 532 KEAYRWKA +++K TPKAL+ ALEHEKTPELAA LA E++ RD WA ++SQL L Sbjct: 518 KEAYRWKAQNRPVEEKAPKTTPKALRSALEHEKTPELAAHLAQESLTRDAWAQELSQLRL 577 Query: 533 PKLVEQVALNAWKEESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 PKLV+Q+ALNA++E + +V LHLRS+QRHLN+ A+Q L +ALS G V L+IVED Sbjct: 578 PKLVQQLALNAFREPAPEGSVLLHLRSAQRHLNSASARQTLEQALSDHYGHPVALSIVED 637 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 D+P RTPLEWRQAIYEE+LAQAR SI AD NIQTLRR FDAELDEESIRP+ Sbjct: 638 DDPQRRTPLEWRQAIYEERLAQARASIAADGNIQTLRRLFDAELDEESIRPV 689 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 276/642 (42%), Positives = 356/642 (55%), Gaps = 11/642 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF D+VGQEHVL AL + L R+HHAYLF+GTRGVGKT+I RLLA+ Sbjct: 1 MSYQVLARKWRPRTFEDMVGQEHVLQALIHALEHQRLHHAYLFTGTRGVGKTTIGRLLAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT PCG CD+C+EI + RFVDLIEIDAASRT V+D R+L DNVQYAP RGR+ Sbjct: 61 CLNCETGITPNPCGECDSCKEILENRFVDLIEIDAASRTGVDDMRELTDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHML+ SFNA LKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L+H+L EE I E AL LLARAA+GS+RDALSLTDQAIA G+ ++ VS M Sbjct: 181 EHIVGHLKHVLTEEQIPFEDPALWLLARAADGSMRDALSLTDQAIAFGNENLAASDVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +V A+VE +G +++ IN + ++ +L +ML L HR+ M Q+ P Sbjct: 241 LGTIDQRDIQRIVNALVERDGPGLLSEINRISDFAPDYGVILSDMLSLFHRVTMEQVVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N M +++ELAR + D QL+YQT LIGRK+L PD RMG EMTLLR LAF Sbjct: 301 SADNAMGDA-AQVQELARRLSAEDAQLFYQTALIGRKDLSVTPDARMGFEMTLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P EP P + +P+ P + Q Sbjct: 360 PGTDRREP--------PALVSGNSNNGTAESEPEPGPVSQTASTQAVAAAPQPEPAPQPV 411 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + +P P A + + P + + A + A Sbjct: 412 PSPEPVAELEPQPPMVDDPPPWEPEDYGVQAESPEWQEPVPQSDSSIEPDASAISEPESA 471 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 PV V + + +AL +E A + W L + + +A Sbjct: 472 PEPVSASDPVQSE-QNAGQALVNEPELAPAEPEQPVTADGFVWERDFRSLGITGMPGNLA 530 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 + AV L L L N ++K+ AL G +L I + P + TP Sbjct: 531 SYSSMRMEGQAVVLTLDEGHARLLNARHEEKILAALRSRFGDATQLKIEQG-VPGLHTPA 589 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + + + A ESI D ++++ F+ + EESIRP Sbjct: 590 AFEERQRAARQKAAEESIRQDPLVKSIVERFEGRVVEESIRP 631 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 288/688 (41%), Positives = 393/688 (57%), Gaps = 49/688 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF +++GQEHVL AL N L GR+HHAYLF+GTRGVGKTSIAR+LAK Sbjct: 1 MSYQVLARKWRPRTFREMIGQEHVLRALINALDHGRLHHAYLFTGTRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+++ PCG C C EI +GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCETGVSSEPCGECSACVEISEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 KIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L HIL +E I E AL LAR+A+GS+RDALSLTDQ+I+ G G+VS V++M Sbjct: 181 ERIVGHLSHILEKEVIPFEESALWQLARSADGSMRDALSLTDQSISFGGGKVSEDEVASM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D +LV A++ +G +++ + + A +++ L +++ LLHRIA+ Q P Sbjct: 241 LGTIDHKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITLLHRIAIAQALPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N ++ E A + P D+QL+YQT LIGR++L +PD R G EMTLLR LAF Sbjct: 301 ALDNSYGD-RTQILEFASKLAPEDVQLFYQTALIGRRDLSLSPDPRSGFEMTLLRMLAFK 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAV--------------------MTPTQVPPQPQSAPQQA 400 P+ P Q+ AP + + + P + Q Sbjct: 360 PQGVADVPTQRLQAQPASAPASSSDVASVAAPAAPTAQAAPQPSSNVEPAPAQAAPEQTE 419 Query: 401 PTVPLPETTSQVLAAR----------------QQLQRVQGATKAKKSEPAAATRARPVNN 444 P+ P + Q A + Q K ++EP A P + Sbjct: 420 PSPPAQTSPPQQNVAPNTVEDNSPPADYYDNMPPYEEAQEPVKKPQAEPQQAQAEVPASE 479 Query: 445 AAL----ERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKA 500 A + + + QA P APAK A + + KE ++ P + Sbjct: 480 PAPLGPMHTVVTAAESTQAVAEPEVNTSAPAKTPADALREQVKAIVGKEGISAPPKPAQQ 539 Query: 501 LEHEK------TPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK-EESDNAVC 553 L++ P + ++ E + W + +QL++ +++ A N DN + Sbjct: 540 LKNTPAAPINAAPVVTTPISLEELTPSHWVSVYNQLNVKGILQSTAANTVLIGREDNHLD 599 Query: 554 LHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA-VRTPLEWRQAIYEEKLA 612 L + L + +L+ LS G ++ I + P + TP + I +EK Sbjct: 600 FALDEQKSSLFDPSHSDRLSALLSDYFGVPIKAAIHLQNLPGDLETPAAYAIRIDQEKRV 659 Query: 613 QARESIIADNNIQTLRRFFDAELDEESI 640 A +++ D +QTL++ F+A L EE++ Sbjct: 660 AAIQNMYDDPVVQTLQQQFNATLVEETV 687 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 606 bits (1563), Expect = e-172, Method: Composition-based stats. Identities = 327/704 (46%), Positives = 433/704 (61%), Gaps = 66/704 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F V+GQEH+LTALANGL R+HHAYLFSGTRGVGKTSIARLLAK Sbjct: 1 MSYQVLARKWRPQNFHQVIGQEHILTALANGLKENRLHHAYLFSGTRGVGKTSIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE G F+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCIHGVTAEPCGECEHCKAIENGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L +IL +E I EP AL +A+AA+GS+RD+LSLTDQAIA + + V+ M Sbjct: 181 QQIAQHLANILTQEKIPFEPTALGKIAKAAQGSVRDSLSLTDQAIAMSNADIRVDVVNIM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+Q + ++ A+ + NGE++M I A G +W+ LL+E+ LH+IAM+QL P Sbjct: 241 LGLLDDNQPIEILYALHQGNGEKLMQGIQAVADNGADWDELLIEVGEALHQIAMLQLLPN 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + E ++ LA+ I P +IQ +YQ + +GRKEL +AP+RR+G EMTLLRALAFH Sbjct: 301 RI-----DEESQLGFLAKHISPENIQFFYQIVTMGRKELAFAPNRRIGAEMTLLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQP----------------QSAPQQAPTVP 404 P+ EP + + + + + PQ+ + P Sbjct: 356 PKFSRAEPAEHQVNSTVQDSARAHPEKESAVKKTINLVEMPVYNQHLRVSATPQREQSPP 415 Query: 405 ---LPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAAL-------------- 447 ++TS L A Q++R++ + ++ S +P Sbjct: 416 GNLSGKSTSNALNALAQIERLRASVRSAASTEEKTGFEQPQPAVQAHELPVVSMPQKERP 475 Query: 448 -----ERLASVTDRVQARPVPSALEKAPAK--------------------KEAYRWKATT 482 +RLAS+ + Q P+ K+ +K E YRW+ Sbjct: 476 QTDLIDRLASLAQQAQDNLNPAVKRKSVSKPVSDSTQETENEDDSDDANLAETYRWEWIN 535 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP--KLVEQVA 540 P M + E V P +K+A+ EKTPEL K+ A A ERD W V L L KLV+Q+A Sbjct: 536 PEMAEAENVIRPSEIKQAILKEKTPELVKKVIALAEERDDWTKTVEHLGLDHLKLVKQIA 595 Query: 541 LNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 LN+ ++D+ + L LRS+Q+HL A + L AL + G + L I +D+ TP Sbjct: 596 LNSVILAQTDSEIVLGLRSNQKHLQRESAIEALQAALKVYYGKDLRLKIELNDDERRPTP 655 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 L++R+ IY E +AR+ + AD ++ L++ FDA LD +SIRP+ Sbjct: 656 LDYRRQIYHELSERARQDLQADKKVKLLQQAFDAHLDLDSIRPV 699 >UniRef50_Q0A8H8 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q0A8H8_ALHEH Length = 648 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 279/647 (43%), Positives = 360/647 (55%), Gaps = 12/647 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+++ GQEHVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MAYQVLARKWRPRTFSEMAGQEHVLRALVNALEQQRLHHAYLFTGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TA PCG CD CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVTAEPCGTCDACRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLPG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L ++ +E +A EP+AL L +AA+GS+RDALSL DQAIA G G V V AM Sbjct: 181 GLVADYLHTVVEQEGVAAEPQALARLGQAAKGSMRDALSLLDQAIAFGAGAVREDEVCAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D L +EA+ +G ++A+ + R ++ L E+L LH++A++Q+ P Sbjct: 241 LGTIDRGFVLEALEALAAGDGRALLAVTARMSERAPDFSDALDELLHCLHQLALLQVVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL R+R+LA +P D+QLYYQ L GR++LP AP+ R G EM LLR LAF Sbjct: 301 ALPAGDPDA-DRLRDLAARLPAEDVQLYYQIALNGRRDLPLAPEGRTGFEMVLLRMLAFQ 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQ----QAPTVPLPETTSQVLAAR 416 P A +P + P+ +PT + A Sbjct: 360 PVTGTAVAATGGAGADAPPAAAAGSPRSQAAPKATRPRREAHPSPTPTERAEPAAAPAGG 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 G + A R + V + E A + Sbjct: 420 SPPPEQGGGLGGYREALMRAARGQAVEPDGPAPAPADPSAAAEPAPAGGREPAAGLTDPP 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 W PV ++ P + E PE A A I + W + L L + Sbjct: 480 AWAEGPPVSDEEP----PPIGAQPAAAETAPETTAPDDA-GITPETWPWRARDLPLDGAL 534 Query: 537 EQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 Q A + W E + V L L S L + +LA+ L G V L + ++P Sbjct: 535 RQFAAHCEWVGEEEGRVILRLDSGHGMLRTPALEAELAQVLGDYLGRAVRLDVRL-ESPH 593 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP + E+L ARES+ D N+ L + F AEL +++RP Sbjct: 594 RDTPATVARRERAERLRAARESLENDPNVARLHQRFGAELLPDTVRP 640 >UniRef50_P43746 DNA polymerase III subunit gamma/tau n=23 Tax=Pasteurellaceae RepID=DPO3X_HAEIN Length = 688 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 320/693 (46%), Positives = 425/693 (61%), Gaps = 55/693 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQEH++TALANGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TATPCG C+NC+ IEQG F+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCVHGVTATPCGECENCKAIEQGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLKALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L HIL +E+I E AL LA+AA+GS+RD+LSLTDQAIA GD QV+ VS M Sbjct: 181 TQISQHLAHILTQENIPFEDPALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LDD+ ++ ++ A+ + NGE +M + A +W+ LL E LH+IA++QL P Sbjct: 241 LGLLDDNYSVDILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + LA+ I P ++Q +YQ ++ GRK+L AP+RR+G EMTLLRALAFH Sbjct: 301 K----SSDNNEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLLRALAFH 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQV---PPQPQSAPQQAPTVPLPETTS------- 410 P+ P+ P + + + T P + + A + P TS Sbjct: 357 PKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSIKSAYSQAKPNKTSIPNLASL 416 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPV-------NNAALERLASVTDRVQARPVP 463 L A + L +++ + + + A + + + +++ ++ R P P Sbjct: 417 SALDALEHLTQLENQERQEHKAESLAVVSETLHHIQELDEEKSHKKMTALPVREMTEPKP 476 Query: 464 SALEKAPAKKEA--------------------------------YRWKATTPVMQQKEVV 491 +EK A YRW+ + P + + + Sbjct: 477 KHIEKPTLPSNAAQAPQKNSTEENSSDDNVEIAQDEQEILSADTYRWEWSNPELAKADTG 536 Query: 492 ATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESDN 550 P +K+A+ + TPEL K+ + ++D WA V + L +++ALN + + ++D+ Sbjct: 537 VCPSDIKQAILKDITPELRLKIITQTQQQDQWADIVERSGLTGFSKELALNCFLQSKTDD 596 Query: 551 AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEK 610 + L L S + HL + + LAEALS L+G + LTI DD+ V TP+E+R+ IY+ Sbjct: 597 EINLGLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDS-NVTTPIEYRRNIYQAL 655 Query: 611 LAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +A+ + D+ +Q L FDA+LD ESIRP+ Sbjct: 656 REKAQNELQKDSKLQILLNEFDAKLDVESIRPV 688 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 265/649 (40%), Positives = 362/649 (55%), Gaps = 9/649 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FA++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPRIFAEMAGQQHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GRF+DLIE+DAASRT V+D R+LLDNVQYAP+RGR+ Sbjct: 61 CLNCEVGVSSVPCGECSSCTEIGEGRFIDLIEVDAASRTGVDDMRELLDNVQYAPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+ SF ALLKTLEEPP HVKFL ATTDPQKLP+T+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPITVLSRCLQFNLKNLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L+ +L EE + E AL LARAA+GS+RDALSLTDQAI G GQV+ VSAM Sbjct: 181 ERITEHLQFVLGEEQVPFEEAALWSLARAADGSMRDALSLTDQAIGHGGGQVNEGEVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + + +A++ +G ++A I A + +++A L ++L + H++A+VQ P Sbjct: 241 LGTIERSYVVDICQALISGSGTELLAAIGRMAEQAPDYDAALTDILSVWHQVAIVQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +A + LA + D QL+YQ L+GRK+L +PD + G EM +LRALAF Sbjct: 301 ALDKGVANYTE-LLALAAAVSREDTQLFYQICLLGRKDLQLSPDAKSGFEMVMLRALAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV-----PLPETTSQVLAA 415 P+ P+ A AV P +V P + V PL V A Sbjct: 360 PQTSAQVGSGPKAVAKAQASAAVAPPLEVEPSGKKPEAVVTAVVDDRPPLEPAVEAVAEA 419 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + A EP A + + V ++ A + Sbjct: 420 VSAPESTVKPVTAAPVEPTAQLVVESPVEVYQKSVQPTGYDGVQEAVQKTVDGAVGQPIE 479 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 T ++ P + L+ + A + E D W QLS+ Sbjct: 480 ETVDETIKETIEEASE-KPSQERTPLQTPEAAPAPAPIPLERFTPDNWIQLRRQLSIGAS 538 Query: 536 VEQVALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 + ++A + S + + S L + Q++ +EALS V + I Sbjct: 539 LGEIASHCLYLGRSGQQLNFLIDSDHNSLYDEPHQEQFSEALSDYFQQPVTVDITLG-VA 597 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 TP E+L +A +S+ D + ++ FD ELDE S+RPI Sbjct: 598 EKETPRAATTREKAERLVEAVDSLNQDPAVVKFKQLFDGELDERSVRPI 646 >UniRef50_B5FFM6 DNA polymerase III subunit tau n=2 Tax=Vibrio fischeri RepID=B5FFM6_VIBFM Length = 709 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 312/712 (43%), Positives = 402/712 (56%), Gaps = 72/712 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ E RAL L+A AA+GS+RDALSLTDQAIA G+G V+ + VSAM Sbjct: 181 DQIHEQLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M +N+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L R+ L+ + P ++QL+YQ +L RK+LP AP+ R G EM LLR +AF Sbjct: 301 TLDKTQPDA-ERIELLSTQLSPQEVQLFYQIVLQSRKDLPLAPNERTGAEMMLLRMVAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P + P P AP P T+ Q +QQ Q Sbjct: 360 PVHAQALEAQPIAVPSTEPQAINTAPRVQQQAPSVPANVAPQAQRPMTSQQRPTMQQQTQ 419 Query: 421 R--VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP-------- 470 + SE A P+ + E + + + P AP Sbjct: 420 QGHAPANVPPMHSEQPPMYDAPPMGTPSGESASQAPQQSSSAQPPMQETPAPRSGLLGVR 479 Query: 471 --------------------------------------AKKEAYRWKATT----PVMQQK 488 + A R + + ++K Sbjct: 480 NQLRSAKNNLTNTGTGSKKASAASDKKKTSSVLERIAEKQHLAPRAQVSQIGNSATQEKK 539 Query: 489 EVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS-----------------QLS 531 + + ++ +A+E + V L+ Sbjct: 540 PEEPYRWKSTQPEMKKVVSDVTPTKLKQALEHEKTPEMVKLLVEESSKQDTWSALAMSLT 599 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 LPKLV+Q+ LN+ E DN + LHLR++Q HLN A + + +AL+ V +TI Sbjct: 600 LPKLVQQLVLNSAFVEQDNQIKLHLRAAQSHLNGDKANELITQALTQTLNREVTITIDIS 659 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 D TPLE R+ +Y+ KL A +S+ D ++ + F AE+D+ES+RPI Sbjct: 660 DEG--TTPLELREQMYQTKLQTAYQSLQQDPHVNFFIQRFGAEMDQESVRPI 709 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 279/671 (41%), Positives = 379/671 (56%), Gaps = 32/671 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IARLLAK Sbjct: 1 MSYQVLARKWRPGTFDEMVGQVHVLKALVNALDQERLHHAYLFTGTRGVGKTTIARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGRF Sbjct: 61 SLNCEQGVSSKPCGQCASCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HIL E + + +L +A A+GS+RDALSLTDQAIA G G ++ Q V+AM Sbjct: 181 EHIVQHLNHILTVEQVPFDEPSLWAIAEGAQGSMRDALSLTDQAIAFGHGALAEQEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+LV A+++ + + ++A+++E +++ LL E++ LHR+A+ Q P+ Sbjct: 241 LGTVDLKRVLNLVRALLQKDADGLLAMVSELDEHTPDYQTLLTELMSTLHRVAIAQAVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N + + LA+ DIQLYYQ + EL AP R G EMTLLR LAF Sbjct: 301 AISNHKGDRDA-IMALAKAGYAEDIQLYYQIAGKSKGELSLAPSERAGFEMTLLRMLAFS 359 Query: 361 ----------PRMPLPEPEVPRQSFAPVAPT-AVMTPTQVPPQPQSAPQQAPTVPLPET- 408 P + PE + S APV P + P +P + AP P+ E Sbjct: 360 QTPPSSIDTLPPLTTQAPETTQPSAAPVKPAVSTPEPVSIPASEEVAPDVGPSETTSEAA 419 Query: 409 -TSQVLAARQQLQRVQGATKAKKSE----PAAATRARPVNNAALERLASVTDRVQARPVP 463 S+ + A + + A +E PA+ V E VQ P P Sbjct: 420 VPSEPVNAAETPVKKTPAESVDAAEVLTQPASQPEPATVPEPVSEPEPEPEITVQEDPHP 479 Query: 464 SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEH--EKTPELAAKLAAEAIERD 521 + + E + ++ +++ P + E P+ AA+L+ A D Sbjct: 480 AGAVDTTSMLEPVAEQPPIETPTEENLLSEPDSASDPESKVVETEPQTAAELSDVATWPD 539 Query: 522 P---------WAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQK 571 W + +L L + + + ++ W+ + + L + + R + N QQ Sbjct: 540 TDLDADPVFWWQVTLHRLGLSGMTKTLFAHSQWRGYENGQLSLVISPNYRKIMNDSHQQY 599 Query: 572 LAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF 631 L +A++ LT +TP W + + +A + + AD ++TL F Sbjct: 600 LLQAITDWLPDCQSLTYEFGAV--DKTPQLWLDQLVQAANDRAYQHLKADAFVETLINEF 657 Query: 632 DAELDEESIRP 642 EL +ES P Sbjct: 658 KGELIQESAVP 668 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 246/647 (38%), Positives = 346/647 (53%), Gaps = 42/647 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPKLFEALVGQEHVVRALTNALEQQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCGVC C +I++GRFVD++E+DAAS T+V+ R+LLDN QYAP GRF Sbjct: 61 SLNCETGITAHPCGVCSACVDIDRGRFVDMLEVDAASNTQVDSMRELLDNAQYAPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLSR +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+L+ + Sbjct: 121 KVYIIDEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVTVLSRCLQFNLRQMST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L+ +L +E+I + ALQL++RAA GS+RDALSL DQAIA G +V+ V AM Sbjct: 181 PAITSHLQEVLAKENIPSDSIALQLISRAANGSMRDALSLLDQAIAYGGNRVNESEVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L++A++ +G +MA R + ++ L ++ LLH +A+ Q P Sbjct: 241 LGAIDQSYLYGLLDALIAQDGPSLMAQAKSMEERSLSFDTALADLAQLLHHLAVAQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ D+ + +LA +P +QLYYQ L+GR++L APD G M LLR LAF Sbjct: 301 SIPLDLPE-RTALLDLATKLPADKVQLYYQIALLGRRDLGLAPDEFAGFTMCLLRMLAF- 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + + P P P + + ++ A + Sbjct: 359 ------------------SNESTSKPAPTAPAPSGSDRPIAQHAGSAASALAAATMARSA 400 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A A P A A + E + A + + + P Sbjct: 401 TPSPAAIASPPTPQAKPVAEATMVTSNEVDVAPATAPAAATPVATVAETP---------- 450 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD---PWAAQVSQLSLPKLVE 537 + + + A P LA+ ++++ + W V +L L L Sbjct: 451 -----ADVPTHSQVSSPEPAYTAASEPTLASSPVEDSLQEEFDGNWRLLVDKLKL-GLAR 504 Query: 538 QVALNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 +A + + + + L + + +HL + Q+KL A+ G + L Sbjct: 505 ALAQHCELIGHTADRLELQVPEAHKHLLDPNYQEKLKAAIEAHFGRKMHLQFSIG--GGN 562 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 TP E +QA SI D +Q L R F A++ SI+P+ Sbjct: 563 NTPAHQISQEKAELQSQAESSIQQDGFVQALMRDFGAQIIPSSIKPL 609 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 254/644 (39%), Positives = 347/644 (53%), Gaps = 56/644 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP++F ++VGQEHVL AL N L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MTYQVLARKWRPKSFGEMVGQEHVLQALINALDHDRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++ PCG C +C EI +GR VDL+E+DAASRTKVEDTR+LL+NVQYAP R R+ Sbjct: 61 CLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPATVLSRCLQFNLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L ++L E ++ E AL LL RAA GS+RDALSLTDQAIA G G++ V +M Sbjct: 181 EQIVGHLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETDVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D L+E + + ++A++ A ++E E++ ++HR+A+ Q P Sbjct: 241 LGSVDLSFVYQLLEGVAAGDPAELLAIVGRMAEHAPDFEGSTDELISMVHRVAVAQAVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ N R+ LA++I D QL+YQ + G++++ APD R G EM LLR LAF Sbjct: 301 AIDNSWGDA-DRVAALAQSIGAEDAQLFYQIAINGKRDMALAPDPRSGFEMLLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + E A + P + A + P P E + ++ Sbjct: 360 PAAVIDESL----GAADLQPAPLNPDQGSTAGEVGATAKKPHEPRQEAVPSIELQAPEVS 415 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + K +P+ L Sbjct: 416 PQRPTERLKPEQPSNDADPASRQAVPL-----------------------VSSPPPEVPE 452 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 +TP + + +P + W +SQL L +V+ +A Sbjct: 453 STPKVTGVILEPSP--------------------------ENWPQLLSQLGLLGMVQSIA 486 Query: 541 LN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 N E + + L + L N G + K+ AL + + I + P +TP Sbjct: 487 SNMQLIEAAAGQLEFVLDTDNASLFNDGHRDKIRLALQNYLDRELSVAITVGEPPG-KTP 545 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + E+ QA E+I +D +Q L FD +LD SI P+ Sbjct: 546 AMIQAKAASERQKQAIEAIESDPRLQALITKFDGQLDRASIAPL 589 >UniRef50_C3XBH9 DNA polymerase III subunit gamma n=2 Tax=Oxalobacter formigenes RepID=C3XBH9_OXAFO Length = 604 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 231/646 (35%), Positives = 337/646 (52%), Gaps = 45/646 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F ++VGQ+HV+ AL++ L R+HHAYLF+GTRG+GKT+++R+LAK Sbjct: 1 MSYLVLARKYRPKNFENIVGQDHVVRALSHALESQRLHHAYLFTGTRGIGKTTLSRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA+PCG+C+ C+ I+ RFVD +E+DAAS + D LL+ YAP RF Sbjct: 61 SLNCEKGITASPCGICEACKAIDSDRFVDYVEMDAASNRGIADMLQLLEQAVYAPTAARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNA+LKTLEEPPE+VKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYMIDEVHMLTSQAFNAMLKTLEEPPEYVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E+I E AL+LLA+ A+GS+RDALSL DQAIA G V+ +AV M Sbjct: 181 SHIVDHLSRILELENIPFEKPALRLLAQGAQGSMRDALSLADQAIAYTAGHVTDEAVQDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++ + +G ++ + +E A R + + L ++ LL +IAM+Q P Sbjct: 241 LGALDQTYLIRLLDHLANRDGTSLLKVADEMAFRSLSYSTALQDLGLLLQKIAMIQSVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +D+A + + LA P ++QLYYQ + GR EL APD G MTLLR LAF Sbjct: 301 YPLDDIADSDN-LSRLAAIFSPEELQLYYQIAIHGRNELGLAPDEYAGFSMTLLRMLAFS 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P +S + + TP P Q Q + + ++ Sbjct: 360 PDK-------GNRSIPQIVSKSERTPANRPKTDSGKGQA---------VEQKVPSSPVVE 403 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 ++ K + +A + + + + + + + + A + A Sbjct: 404 KIPVPEKKPEETVSAIPPWVDDESFSNQGGQTAKSPEVKKNESAPVTEVVALAMSAEMPA 463 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 K E W + L + +V+Q+A Sbjct: 464 -----------------------APADVPVKKNPGEGSWNGNWPELAAVLPVRGMVQQLA 500 Query: 541 LNAWK---EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR 597 E+ D+A LHL+S L +L E L+ G V++T Sbjct: 501 QQTELVHWEKKDSACVLHLKSPIATLCTPNNINRLTEVLAEHFGQPVKITTEIG--KVEE 558 Query: 598 TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 T + E+ QA E+I D ++++ F + E S++P+ Sbjct: 559 TANQNAIEARAERQRQAEEAITNDPYVKSVIAEFGGHIVEGSVKPV 604 >UniRef50_Q0VNM5 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q0VNM5_ALCBS Length = 615 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 268/643 (41%), Positives = 360/643 (55%), Gaps = 34/643 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I ++ AL L +AAEGS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYDEPALLSLGKAAEGSMRDALSLTDQAIAFGGEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALASVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 -------SYDETQQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + +V P V + + L +T + A Sbjct: 354 P----------KGVLVQGDNPSVKKPKAVASSEEPGDKPDLRALLNKTPAAAPAPVSLPT 403 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + EP+ A A + P SA+ AP++ E Sbjct: 404 PASASAPVTAPEPSPTRAAPAAAEQAASADDAPPWDESPGPSTSAVAVAPSQSEPQAEPE 463 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Q+ P A+ EA WAA + +L + V +A Sbjct: 464 PNQAPTQEVEPLAP---------------LAEPTNEAEVATWWAALLLRLDVDGTVRNIA 508 Query: 541 LNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 NA ++ L + + L NR ++L+ AL +++ + + P TP Sbjct: 509 RNAVLISREESVWTLRISPGHQVLVNRERLEELSGALGNYFQRRIQVQVEFEQQPGA-TP 567 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 +A +E L QA++++ +D +Q L F LD+ES+ P Sbjct: 568 EVIAEARRQELLLQAKDTLHSDPVVQQLITTFGGRLDDESVTP 610 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 249/654 (38%), Positives = 340/654 (51%), Gaps = 16/654 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+ FA++VGQEHV+ AL+N L GR+HHA+LF+GTRGVGKT+IAR+ AK Sbjct: 100 MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK 159 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG +A PCG C C +I+ GR++DL+EIDAAS T V+D R++++N QY P+RG+F Sbjct: 160 SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF 219 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ +FNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK LD Sbjct: 220 KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE 279 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI+ Q+ IL E I +P A+ L++AA+GSLRD LSL DQAIA G + V M Sbjct: 280 DQIQGQMTRILAAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM 339 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D Q ++++A+ + +G +++ ++ A +W +L + LHRI + QL P+ Sbjct: 340 LGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS 399 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + P +QL+YQ L GR++L AP R G EM +LR LAF Sbjct: 400 VAFVGDGIDPT---GFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFR 456 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P +P A T T V P +A Sbjct: 457 PAAAVPAGSGDDGRGASAGGHTRGTATGVQAAPAAAAPARAATSAKAADVSPAPVVSAPP 516 Query: 421 RVQGA------TKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 A +A AR + + A +A A Sbjct: 517 VAAAPSPVVVLPTAAAEPAPSAPPARTDDTPPWAVDDAPVRAQAAPQRATAEVPAAVPLM 576 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE-----AIERDPWAAQVSQ 529 A P + + P AA + + W V++ Sbjct: 577 APEAAMALPATVADDAAPAAMDAVVPVAPPSAPAPVTPPAATFDDGHIADAEQWLELVTR 636 Query: 530 LSLPKLVEQVALN-AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 L Q+A N A+ D + L L +LN+ + LA+AL+ G+T + I Sbjct: 637 SGLNGPSRQLAANAAFIGHRDGVLRLALAPGFEYLNSERSIANLAQALAPELGNTPRIVI 696 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + V T E E+ + A + + D N+Q L + A + +SIRP Sbjct: 697 ETG-SADVETLHERANRQKGERQSAAETAFMNDPNVQQLIQQQGARVVPDSIRP 749 >UniRef50_C5S1I5 DNA polymerase III subunits gamma and tau n=2 Tax=Actinobacillus minor RepID=C5S1I5_9PAST Length = 698 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 327/700 (46%), Positives = 426/700 (60%), Gaps = 69/700 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGITATPCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGITATPCGECANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI H LE IL E I +E A++ LA+AAEGS+RD+LSLTDQAIA + V+ AVS M Sbjct: 181 TQIAHHLEFILKAEQIPYETAAIEKLAKAAEGSIRDSLSLTDQAIAVTNANVTLSAVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L L+ A+ A+GE+VMA+I A +G++W LL ++ +LH+IAM+QL + Sbjct: 241 LGLIDDHQPLELIMALANADGEKVMAVIQNVAEKGVDWNQLLNDVAEVLHQIAMLQLVKS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + A + LA+ + P DIQ +YQ +L+G+KELP AP++R GVEMT LRALAFH Sbjct: 301 AEQEESA-----IHFLAKQMAPEDIQFFYQVILMGKKELPLAPEQRSGVEMTFLRALAFH 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ--------------------- 399 P E + AP + P Q+ QP Q Sbjct: 356 P----KRTEAINLNVAPQQTQNSVAPQQIVQQPTRTAQDNIAQLRERLAKESSSTQAVQN 411 Query: 400 --------------APTVPLPETTSQV----------LAARQQLQRVQGATKAKKSEPAA 435 +P V P +T + AR+QLQ Q + + Sbjct: 412 NEHFAKVSQNATAYSPNVNAPTSTETPTQGVSAALVAMQARKQLQETQAQLDQTEKKKPE 471 Query: 436 ATRARPVNN-----------AALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 +P+N L + P E YRW P Sbjct: 472 LVIPKPINTNKQPANLQERFMNLAVAQQQQTTREKTVTKPVATAKPTNDEDYRWTWLNPE 531 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW 544 ++ ++ A P +K+A+ E+TPEL K + + E+D W V++L+L L Q+ALN++ Sbjct: 532 LENQDESAKPSDIKRAILQERTPELVEKTISLSCEQDKWCKLVNELALGGLSRQLALNSY 591 Query: 545 KEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWR 603 + +N + L L+ + HL+N ++Q LA AL + ++ +TPLE R Sbjct: 592 LSDTQNNELHLVLKPAMAHLDNLESRQSLATAL---LEKGFTYQLTLGESAENKTPLEIR 648 Query: 604 QAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +AI+E+ A+ ++ +D + LR+ FDAE+DE +IR + Sbjct: 649 RAIFEQLTVDAKNALFSDEKLMLLRQAFDAEIDESTIRAV 688 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 282/717 (39%), Positives = 378/717 (52%), Gaps = 77/717 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TF ++VGQEHV AL N L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRTFHELVGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G+T+ PCG C+ CREI++GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP +GR+ Sbjct: 61 CLNCRQGVTSVPCGECETCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFTLKNMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L HIL E +A++ +AL LL +AA+GS+RDA+SLTDQAIA G G+V V+AM Sbjct: 181 ERVVGHLSHILQAESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFGQGEVRHADVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+L EA+ E + RV+ + A +G ++ +L ++ G+ HR+A+ Q+ P Sbjct: 241 LGTLDHRHLLALAEALAEVDAARVLQEVASLAEQGPDFGGILDDLAGIFHRLAIAQMVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL N + LA D+QLYYQ L GR ++ APD R +EMTLLR LAF Sbjct: 301 ALDNGHGD-RDTLLPLAARFTAEDVQLYYQIALQGRGDMESAPDPRTALEMTLLRMLAFR 359 Query: 361 PR--MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA------------------ 400 P+ P+ +P + A TA P Q +AP Q Sbjct: 360 PQGVPKPPQTPLPIRGAAEGQATASTPTADAPGQLAAAPSQPSPADTPPPAADAAPAHPP 419 Query: 401 --PTVPLPETTSQ----------------VLAARQQLQRVQGATKAKKSEPAAATRARPV 442 P P + AA L+ AT+A +EP + Sbjct: 420 SRPDTQAPVAEEEHGAAAGADASSASPADEPAAPGTLESESFATQAFDNEPLESAPPDIE 479 Query: 443 N----------------NAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQ 486 + + A+ + + ++ A P + Sbjct: 480 SAVAAPPEPAAPVTEAVPPVADAQATAAEDALEDALEDEAQRQADADGAVDVDDAPPWVL 539 Query: 487 QKEVVATPKALKKALEHEKTPELAAKLAAE-------------------AIERDPWAAQV 527 + + A ++A + A + W A Sbjct: 540 DDAQMPADEISAPPEPPSAPDAPATEVAEDADAPAPTAQAPAVATPDTGAFDHARWLASF 599 Query: 528 SQLSLPKLVEQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 + L L L +A + EE D + L L SQ + +++ +AL+ G L Sbjct: 600 ASLGLGGLTRNLAAHCIVEEDDGDTLTLRLDPSQSAMLADVHVERMTKALAEQ-GVARRL 658 Query: 587 TIVEDDNP-AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 + P TP + + + + AQA E++ D +IQ L + F A+L E S+ P Sbjct: 659 HVTVAAIPEGWETPRAQGERLAQARHAQAVEALRRDPHIQMLEQDFGAQLLERSVTP 715 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 295/684 (43%), Positives = 388/684 (56%), Gaps = 46/684 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITATPCG C C EIEQGRFVDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKALSN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL ++L++E + + AL LLAR+A GS+RDALSLTDQAIA G G VS +V M Sbjct: 181 DDITQQLSYVLSQEQVQADSEALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +L+E+++E + E VM ++ + + ++LVE+ LLH++A+VQ P+ Sbjct: 241 LGNVPVADIAALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ L R +P IQ++Y+T+L GR+E YA D R G+EMTLLR L F Sbjct: 301 AANVF--ENSDVLKPLLRRMPAELIQVFYRTVLEGRREQAYAIDARSGLEMTLLRLLCFR 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P S A P + +T A A P Q A + Sbjct: 359 PAEKGDYNITEPDSSAVDMPESKLTAPAQEVTETEAGSVAEVTPQAGPEPQPEAELSEPM 418 Query: 421 RV---------------------------------QGATKAKKSEPAAATRARPVNNAAL 447 + + A EP A A P A Sbjct: 419 QPSYSEHEEPPEFNYSEPDDDAGFYHNDAPPYHMEEAAKSEPVPEPTADQTAEPTPEPAA 478 Query: 448 ERLASVTD--RVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEK 505 + + V D RV+ + K + + ++PV A P+A + + E Sbjct: 479 QSSSGVADLLRVREQLAEKKNPDNSNKTLNSQTENSSPVALTVPAEAEPEAQPE-HQPES 537 Query: 506 TPELAAKLAA------EAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAVCLHLRS 558 EL +L EA E D W+A ++ + + L QV LN+ ++ D+ + + Sbjct: 538 KDELNEELPELNDDIREAAEVDKWSAMIAGMDISGLARQVLLNSELQKLGDDDWLILVAE 597 Query: 559 SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESI 618 Q+ L N Q + E+L+ L G+T + P+ TPL +Q I E + +A E + Sbjct: 598 EQKSLLNESTSQAVRESLAGLLGATARVDFKVG-VPSQPTPLMVQQHINEYRHQRACEIL 656 Query: 619 IADNNIQTLRRFFDAELDEESIRP 642 D +Q L++ F A++DE SI+ Sbjct: 657 HGDAGVQDLQQRFQAQIDESSIQA 680 >UniRef50_B4X4U2 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4U2_9GAMM Length = 635 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 261/643 (40%), Positives = 359/643 (55%), Gaps = 14/643 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP+TF ++VGQEHV AL + L R+HHAYLF+GTRGVGKT+IAR+L++ Sbjct: 1 MSYQVLARKYRPRTFDELVGQEHVSRALMHALDQDRLHHAYLFTGTRGVGKTTIARILSR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCGVC C+EI GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGR+ Sbjct: 61 CLNCEQGVSARPCGVCPTCQEITDGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVT+LSRCLQF LKAL Sbjct: 121 KVYLIDEVHMLSAHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKALPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ +L++E I +E AL L +AA+GS+RDALSLTDQAIA G Q+S++AV+AM Sbjct: 181 EQIAGHLKTLLDKEMIRYEEPALLSLGKAAQGSMRDALSLTDQAIAFGSEQLSSEAVNAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L+L+ A+ E V+ + + ALL E++ LH++A+ Q P Sbjct: 241 LGTVDRNHVLTLLVALAEQEPGGVLQALATVSEHCPGELALLDELISQLHQLAVCQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ++LA + IQLYY L GR++L APD R +EM LLR + F Sbjct: 301 -------SYDETQQQLAAALTAEQIQLYYDVALRGRRDLQDAPDSRAALEMLLLRMVLFT 353 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + + + P+ P + P + S+ A Sbjct: 354 P-----KGVLVQGDSPAAKKPEAAVPSAEPGGKPDLRALLNSPPAAASHSEPAARPAAQP 408 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A+ + + + ++ A + A Sbjct: 409 PEPAPATVTSAPAQQTAPVEAAAPASADDAPPWDEGPASSSPSASAALAQVEANQPEPAA 468 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 + + P+ + + A+ EA WAA + +L + V +A Sbjct: 469 EAAAAVAAQPQSDPEPNAEPAPESENLAPLAEPTNEAEVATWWAALLLRLDVDGTVRNIA 528 Query: 541 LNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 NA ++ L + + L N+ ++L+ AL +++ + + P TP Sbjct: 529 RNAVLISREESVWTLRISPGHQVLVNKERLEELSGALGNYFQRRIQVQVEFEQQPG-ETP 587 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 +A +E LAQA++++ AD +Q L F LDEES+ P Sbjct: 588 ERMAEARRQELLAQAKDTLHADPVVQQLVTTFAGRLDEESVTP 630 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 265/645 (41%), Positives = 362/645 (56%), Gaps = 10/645 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG TA PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GRF Sbjct: 61 SLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTMGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E I +E AL LL RAA GS+RDA SL DQAIA G G+V V AM Sbjct: 181 QQVSSHLAHMLDIEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L++A+ ++G +MA + A RG+ +++ L E+ LL ++A+ Q PA Sbjct: 241 LGAVDRRYLFTLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL D + LA I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 301 ALAADEPE-RDTLFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFH 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + P + A V P V ++ + + L A+ Q Sbjct: 360 PANAPAQTAAPARPAAAVQPRPVAASAAAVASVSVPAERGMSPAARALQAAGLGAQAQ-- 417 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 AA +++V++ + P P A + Sbjct: 418 ----GKPRAAEPSPAAEPEPEPAPLPSAVVSAVSEPSKPAPSPQPAPALAAPVSEPAAQD 473 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP-KLVEQV 539 ++E+V P + A+ + W V+ L + Sbjct: 474 DEDERDEEEIVEAPWSDDDAMPAYMQQPPLEDEPSSYSFDGDWQRLVADLGAKLGAARML 533 Query: 540 ALNAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 A NA + S + + L + S RH++ R Q+KL AL+ G V+L + + + T Sbjct: 534 AHNAVLKRWSQDRLELAVPESFRHMSGRDYQEKLKAALAERFGHPVDLAVTV-EELGMET 592 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 P + +E+LA ARE + D +Q + R F A L E+I+P+ Sbjct: 593 PAMTDARLRQEQLAVARECMQNDPVVQQMVREFGATLLIETIQPV 637 >UniRef50_A6T0H3 DNA polymerase III gamma and tau subunit n=3 Tax=Betaproteobacteria RepID=A6T0H3_JANMA Length = 673 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 258/677 (38%), Positives = 344/677 (50%), Gaps = 38/677 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RP++F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 NC GIT+TPCGVC+ C I+ GRFVD IE+DAAS V++ LL+ YAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 + RFKVY+IDEVHML+ H+FN++LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L++IL +E+I E AL+LLA+ A GS+RDALSLTDQAIA G+V+ Sbjct: 181 KQMPPGHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLD 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG LD + L++A+ E +G ++A+ +E A R + + A L ++ LLHR+A+ Sbjct: 241 AVQGMLGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PAA+ D+ MR LA +IQL+YQ + GR EL APD G MTLLR Sbjct: 301 QTVPAAVPEDLPEYADVMR-LAGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLR 359 Query: 356 ALAFHP----RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 LAF P P + A AV P SA QA + P Sbjct: 360 MLAFRPGFGPAEAKPVAAAAPAARPAAATPAVAPAASAPAARLSAAPQAASTSAPVARPT 419 Query: 412 VLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 + + K + AA P A A+V A V A Sbjct: 420 GAMSPARAALEAARAGVKGAPAPAARPVAPAAPVAAPAPAAVAAPSPAMAVADRS-PAID 478 Query: 472 KKEAYRWKATTPV--MQQKEVVATPKALKKA------------------LEHEKTPELAA 511 A W P E ++P A KK Sbjct: 479 MAPAPPWDDEPPFAGSNGIEEFSSPVAQKKTEPEPAAVAEAAPAPAPVPAAPRVARPFQL 538 Query: 512 KLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK-----EESDNAVCLHLRSSQRHLNNR 566 A W A + L + + +Q+AL + + L + L Sbjct: 539 HPVASLNWDGNWPALAAILPVRGVAQQLALQSELLKCGPTPESAQITFDLLVAVDVLLAN 598 Query: 567 GAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT 626 G+ +KL L G TV L T A E+ +A +S+ D +Q Sbjct: 599 GSAEKLTAVLCEHFGQTVRLQTTIGAVE--HTASAAAIADRAERQREAEQSMQEDPFVQK 656 Query: 627 LRRFFDAELDEESIRPI 643 L R F A + S++P+ Sbjct: 657 LMREFGATIVPGSVKPV 673 >UniRef50_B8F323 DNA polymerase III subunits gamma and tau n=4 Tax=Pasteurellaceae RepID=B8F323_HAEPS Length = 670 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 319/676 (47%), Positives = 421/676 (62%), Gaps = 41/676 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F++VVGQ+HVL+AL NGL GR+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGI+A PCG C NC+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P GRF Sbjct: 61 GLNCETGISADPCGQCANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHL+AL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ LE IL +E I +E AL LA+AA+GS+RDALSLTDQAIA + ++ VS M Sbjct: 181 SQIQQHLEFILTQEQIPYELSALAKLAKAAQGSIRDALSLTDQAIAVSNVNITLPIVSQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DD Q L LV+A+ A+GE+ MA+I A +G++W+ L + LH+IAM+QL Sbjct: 241 LGLIDDHQPLELVQALANADGEKAMAVIQSVAEKGVDWQQLFSDTAETLHQIAMLQLLKH 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + LA+ I P D+Q +YQ +L G+KELP+AP++R GVEMT+LRALAFH Sbjct: 301 AHQEETP-----LHFLAKQISPEDVQFFYQVMLTGKKELPFAPEQRSGVEMTILRALAFH 355 Query: 361 PR------------------------MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA 396 P+ L E +Q+ A T + Q + S Sbjct: 356 PKNMATTTTVATPTTPVAPVQSPNSISQLRERLAQQQNSAQTVTTQAVNTEQHFAKNLSQ 415 Query: 397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVN--------NAALE 448 P +PT E+ S L A Q Q+++ + + + + L Sbjct: 416 PTASPTETNTESISPALKAMQARQQLKAKQEQQDEKKKSDLTPIQPPKTVNKKSVQQGLM 475 Query: 449 RLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPE 508 L + D+ Q A E YRW P ++ +E P +K+A+ E+TPE Sbjct: 476 NLVTAQDQRQQIEETPQKNIASQNDEDYRWTWLNPELENQEEAPKPSEIKQAILQERTPE 535 Query: 509 LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE-ESDNAVCLHLRSSQRHLNNRG 567 L K ERD W+ V+ L L + Q+ALN++ E ++N + L L + HLN+ Sbjct: 536 LVKKTIELGCERDKWSRIVNSLKLGGVSRQLALNSYLESHNNNHLLLVLNPTMAHLNSNE 595 Query: 568 AQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTL 627 A Q L ALS + ++ +TPLE R+ I+E+ +A++++ AD ++ L Sbjct: 596 ATQSLYNALSQ---QGFSSEMRIGESDEFQTPLEIRRVIFEQLTQEAKQALQADKKLKLL 652 Query: 628 RRFFDAELDEESIRPI 643 ++ FDA++DE +IR + Sbjct: 653 QQAFDAQMDEATIRAV 668 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 249/662 (37%), Positives = 364/662 (54%), Gaps = 22/662 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TFAD+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVVKALRNALDEGRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE + PCG C++C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 61 SLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+P+T+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPITVLSRCLQFVLRNMTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E++ ++P+ALQLL RAA GS+RDALSL DQAIA G G+V+ Q V M Sbjct: 181 QQVAEHLAHVLDRENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSGKVAEQDVRQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+E ++ NGE ++ E +AR I +++ L E+ LL R+A++Q P+ Sbjct: 241 IGAVDKQYLFELLEGIINQNGEALLEKAQEMSARAIGFDSALAELAMLLQRLALIQTIPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL ND + L++ + IQLYYQ + G+++LP APD G MTLLR LAF Sbjct: 301 ALANDDPE-RETLLRLSQALSGEQIQLYYQCAIHGKQDLPLAPDEYAGFVMTLLRMLAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP--QPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + + + P P+S P AP V ++ + Sbjct: 360 PLAASGCDTQSQIEHTDLHSDHQKAEAEKKPFQLPKSEPIAAPAVEKEAAPAKQDTVERS 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + + + + P V+ + + A+ + ++KAPA +E Sbjct: 420 SEETVQSVQQQADVPPWEEMPSQVSVESPQTQAAQMQEATEPLPVAKVQKAPAPEEYPHM 479 Query: 479 KATTPVM-------------QQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAA 525 P V P A ++ E E E + + W + Sbjct: 480 DEEIPPPYFDEAYTYEDSHHADVMEVPQPVASAESEEEEGDEEELQFAPLPEFKTENWHS 539 Query: 526 QVSQLSLP-KLVEQVALNAWKE---ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSM--L 579 + + + + +A NA + L L + N+ K+ + LS Sbjct: 540 IIERFARKLGAAQMLAQNAAWTSYDAEAGLIMLSLTDEAKATANKERLDKICQTLSEAYH 599 Query: 580 KGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 G+ T D+ TP+ R+ I EE QA+E + AD Q + + F+A+ +S Sbjct: 600 LGNLRLQTEPWQDDKGWETPVMRRKHIQEEGRQQAQELLEADTTAQKILQTFEAQWLPDS 659 Query: 640 IR 641 + Sbjct: 660 LE 661 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 277/648 (42%), Positives = 366/648 (56%), Gaps = 20/648 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FAD+VGQEHV+ AL N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 22 MTYQVLARKWRPKRFADLVGQEHVVRALTNALAGERLHHAYLLTGTRGVGKTTIARILAK 81 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++L+N QYAP GR+ Sbjct: 82 SLNCEAGVGAEPCGECSACRQIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRY 141 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 142 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP 201 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L +L+ E +++E AL LL RAA GS+RDALSL DQAIA G G+V V AM Sbjct: 202 QQVAGHLARVLDVEQVSYEAPALALLGRAAAGSMRDALSLLDQAIAYGVGKVEEGGVRAM 261 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+EA+ EA+G R++A A RG+ +++ L E+ LL +IA+ Q PA Sbjct: 262 LGAVDRAYLYTLLEALAEADGPRLIAEAKALAERGVGFDSALGELALLLQQIALAQTVPA 321 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D E + LA+ I P D+QLYYQ + GRK+L APD G MTLLR LAFH Sbjct: 322 AITGDDPDAEAVL-ALAQLIAPEDVQLYYQIAIHGRKDLALAPDEHAGFTMTLLRMLAFH 380 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P AP T P+P S P AP+ P E S A +L Sbjct: 381 PL------------NAPGDSTPTPRAAASRPEPASRP-AAPSEPSVEGASAAKALLARLS 427 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 GA ++ + P + A P A A P E W+ Sbjct: 428 GRNGAARSAPATPDESAPADPEPEPARVEPAPRPVPAAPAVATQPEPGTPPSVELAPWED 487 Query: 481 TTPVMQQKEVVA---TPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP-KLV 536 A A A E P A + WAA V++L Sbjct: 488 APDDAGDVAAEAWQAGASADDSAAEAWSEPAAPPAAAEPYVFDGDWAALVAELGARMGAS 547 Query: 537 EQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 +A NA + D + L + S RHL R Q+KL AL+ G EL++ + Sbjct: 548 RMLAHNAVLKSWDGRRLQLAVPESFRHLATRDYQEKLKAALAERFGQAPELSVSV-EELG 606 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + TP +E+LA AR ++ D ++ L F+A L E+I+P+ Sbjct: 607 METPAMREARFRQEQLAAARVNLENDPVVRQLVGEFNAVLLTETIQPV 654 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 563 bits (1451), Expect = e-159, Method: Composition-based stats. Identities = 259/697 (37%), Positives = 378/697 (54%), Gaps = 58/697 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ VLARKWRP+ F+++VGQ HV+ AL+N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MTDTVLARKWRPKNFSELVGQTHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCGVC CR I++GRFVDLIE+DAAS+TKVEDTR+LL+NVQYAP +GR+ Sbjct: 61 ALNCEQGITSKPCGVCSTCRSIDEGRFVDLIEVDAASKTKVEDTRELLENVQYAPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDP KLP+T+LSRCLQF+L L + Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +IL +E + E AL ++A++A+GS RD+LS+ DQAIA G G+V AV AM Sbjct: 181 PQIQQHLAYILQQEQVTFEETALAMIAKSADGSARDSLSILDQAIAYGGGKVQYDAVQAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L+++ A+ + + + +I + A G+++ AL +++ LH+++M+Q+ Sbjct: 241 LGLVDQQFTLNILSALANESADELKEVIQQLALMGVDYTALNGQLIEALHQMSMLQVLGD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + +E+ +++L+ + P IQ+ YQ L+ ++++ APD R+G EM+LLR LAF Sbjct: 301 LTESSLIEVEM-LQKLSEQLSPERIQVLYQIALLAKQDMALAPDIRIGFEMSLLRMLAFK 359 Query: 361 P---------RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 P PE + RQ A P +P QP +A + P Sbjct: 360 PVFSETMSSMEQTEPEEGMSRQENVKTARPGQNEPAAIPNQPAAADEARTNFEAPSHFEA 419 Query: 412 VLAARQQLQRVQGATKAKKSEP--------------------------------AAATRA 439 A + + Q A ++ +P A Sbjct: 420 PSAPQSSMPETQAAPQSSAPQPSGEMDHLTDLKARLDSTLGKSEAPIEHRENHDAEVPTF 479 Query: 440 RPVNNAALERLASVTDRVQARPVPSALEKAPAKKE-------AYRWKATTPVMQQKEVVA 492 + +LE+ AS + A + A +A P + + + Sbjct: 480 DVPSGQSLEQSASFLTETRQEDDRPVESAAAFQASSHVPVQKAVTEEAMAPAFESPGMES 539 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIERD-----PWAAQVSQLSLPKLVEQVALNAWKEE 547 + ++ E E E A + D W A ++QL L + ++A + + Sbjct: 540 VTPSSQEHFEQEPVSEAVVADAPIEMNADTASVTDWIALITQLQLEGMAAELARQSILVK 599 Query: 548 SD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAI 606 D ++ L + Q H A Q+L E + G + I D TP + A Sbjct: 600 RDAQSLTLSIDPEQVHAKTELALQRLEEQVKAQLGVRL---IFVDYPEDHWTPAKHFAAE 656 Query: 607 YEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + + A ESI D +Q L + + ++ E SIRPI Sbjct: 657 AKARQGNAAESIRNDAVVQNLIQTLNLKVIESSIRPI 693 >UniRef50_Q493A4 DNA polymerase III, tau and gamma subunits n=2 Tax=Candidatus Blochmannia RepID=Q493A4_BLOPB Length = 698 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 282/689 (40%), Positives = 415/689 (60%), Gaps = 48/689 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+D+VGQEH++ A+ + SL +IHHAY+ SGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPKKFSDIVGQEHIIQAITHTFSLNKIHHAYILSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G T T CG C+NC++IE G F+DLIEIDAASRTKVEDTR+ LDNVQY P+RGRF Sbjct: 61 GLNCEQGTTYTMCGQCNNCKDIELGCFIDLIEIDAASRTKVEDTREFLDNVQYMPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP HVKF+L TT+ QKLP TILSRCLQF+LK L++ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPTHVKFILVTTEYQKLPETILSRCLQFYLKPLNI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +I ++E+I E AL+ LA A++GS+RDALSL +QAI G+ +++ ++ M Sbjct: 181 SQIINQLTYIFHKENINIETSALESLAYASKGSMRDALSLAEQAIVLGNNEITNNVINNM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 G + + L L+E++++ + +M I G+ W+ + E+L +L +IA+ Q Sbjct: 241 FGISNIEHPLCLIESLIDEDIHNIMHQIENLTVLGVHWDYVFNEILTILQKIAIGQFLSN 300 Query: 298 -SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 N I RMR L+ I P ++QLYYQ L+GR+ELPYAP RMG+EMT+LRA Sbjct: 301 SVQKEDNNVTQHINQRMRRLSNRITPENVQLYYQIFLLGRRELPYAPSHRMGIEMTMLRA 360 Query: 357 LAFHPRMPL---------PEPEVPRQSFAPVAPTAVMTPT---------QVPPQPQSAPQ 398 LAF P + + + ++S + T Q Q + Sbjct: 361 LAFRPDVDIANKKNGNGDDNDHILKKSVCSNNNVEINTNDTQHIATDLFQKKNHNQGSKN 420 Query: 399 QAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTD--- 455 T L +T + +L ++ + TK K S+ ++ R + + LE + + Sbjct: 421 VLNTEKLKKTNNILLLNFKKSELNSDNTKPKISKSVSSRDTRDITSTILEARSKLLQYKE 480 Query: 456 --------------RVQARPVPSALEKAPA------KKEAYRWKATTPVMQQKEVVATPK 495 + + LE+ + K + R++ + + Sbjct: 481 RDKLNVIEKKSNLTLESQKKIKDILERFASINTIILKNSSDRFEKINKDLSGYLEFSNNS 540 Query: 496 ALKKALE--HEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE-SDNAV 552 K+ L H+ P+ ++ +AI + W +Q+ +LSLPKL +++ +N+WKE+ S + + Sbjct: 541 NNKENLHRNHQNMPDFIKEILQKAINNNLWISQIYRLSLPKLAKKLVMNSWKEKISSDEI 600 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 CLH+RS +HLN+ + + ++LS G ++L I +DDN A++TP+E +Y+EK++ Sbjct: 601 CLHVRSDYQHLNSTELRNIIQKSLSNNIGIAIKLHIKKDDNYAIKTPMEHLYTLYKEKIS 660 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIR 641 ++ +D ++ ++ FFDAE+DE I+ Sbjct: 661 LIKKEFSSDPYVKMIKSFFDAEIDENDIQ 689 >UniRef50_Q7MIV2 DNA polymerase III, subunits gamma and tau n=41 Tax=Vibrio RepID=Q7MIV2_VIBVY Length = 730 Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 311/733 (42%), Positives = 397/733 (54%), Gaps = 93/733 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+ F +VVGQ HVLTAL N L R+HHAYLFSGTRGVGKTSI RL AK Sbjct: 1 MSYLALARKWRPRQFKEVVGQGHVLTALENALEHNRLHHAYLFSGTRGVGKTSIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PCG CD CREIE+GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 ALNCEKGITSAPCGQCDTCREIEEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+ IL +E + + RAL ++A AA+GS+RDALSLTDQAIA G+GQ+ T VS M Sbjct: 181 DAIHQQLDFILAKEGVTAQARALGMIAHAADGSMRDALSLTDQAIALGNGQIETDLVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D DQA+ L+EA+ + M I + A G EW+ LL ++ LHRIAM QL P+ Sbjct: 241 LGTIDTDQAIHLLEAISSKQPQVAMDKIQQLAQNGAEWDGLLQQLATQLHRIAMYQLLPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +L ++ L+R + P D+QL+YQ L GR +L AP+ R+G+EM +LR +AF Sbjct: 301 SLDKAQPDA-EKIELLSRALSPQDVQLFYQIALKGRDDLSLAPNGRIGMEMIVLRMMAFR 359 Query: 361 PRMPLPEPEVPRQ-------------------SFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 P + Q S A AP P+ P PQ Sbjct: 360 PADVSQANIISAQGANLASAPAAQSAAPQVSTSPAQTAPAMSAKPSSERVAPAERPQAVS 419 Query: 402 TVPLPETTSQVLAARQQLQRVQGATKAKKSEPA------AATRARPVNNAALERLASVTD 455 P +S + Q VQ + P P E A++ Sbjct: 420 HAPSRLASSMNAPSSVAPQPVQTEMPPQYDAPPMDYADYPPMDDMPPMGYGYEDAAALQP 479 Query: 456 RVQARPVPSALEKAPAK-----------------KEAYRWKATTPVMQQKEVVATPKALK 498 Q P + +PA + K + +KE V A K Sbjct: 480 EPQPAPQQAPERASPAPGGLTGLRHQLRSQRQGLAQNGGSKKSKAASAEKESVLDRVAQK 539 Query: 499 KALEHEKTPELAAKLAAEAIERDPWAAQ-------------------------------- 526 +A + +P + + ++ D Sbjct: 540 QATAAQVSPRQSLAPSEPEVKEDEPYQWRPSQPVVQSKSKELTPTEIKRALEHEKTPEMA 599 Query: 527 -------VSQLSLPKLVEQV---------ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQ 570 + Q KL+ Q+ ALN+ + + + L LRS Q+HLN AQ+ Sbjct: 600 EKLVAESLEQSEWAKLITQLETAKLVEQLALNSAFNKEGSTIALTLRSHQQHLNTDKAQK 659 Query: 571 KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRF 630 +L AL+ G T L++ TPLE R+ +Y++KL QA S+ D ++Q + R Sbjct: 660 ELLSALNETLGETCHLSVEVG--GQGETPLELRERLYQQKLQQAFTSLENDTHVQFILRR 717 Query: 631 FDAELDEESIRPI 643 F AELD +S+RP+ Sbjct: 718 FSAELDRDSVRPV 730 >UniRef50_B8KYG2 DNA polymerase III, gamma and tau subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYG2_9GAMM Length = 672 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 248/643 (38%), Positives = 340/643 (52%), Gaps = 59/643 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQVLARKWRP F ++VGQ+HVL AL N L R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 84 MGYQVLARKWRPGNFQEMVGQQHVLRALVNALDNDRLHHAYLFTGTRGVGKTTVARILAK 143 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+++TPCG CD+C EI +GR VDL+E+DAASRTKVEDTR+LL+NV YAP R RF Sbjct: 144 CLNCDQGVSSTPCGTCDSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVLYAPTRSRF 203 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP H KFLLATTDPQKLP T+LSRCLQF+LK + Sbjct: 204 KIYLIDEVHMLSGHSFNALLKTLEEPPPHAKFLLATTDPQKLPATVLSRCLQFNLKNMVP 263 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L +L EE +A + +L LLARAAEGS+RDALSLTDQAI GDG ++ V AM Sbjct: 264 EEIVAHLGKVLEEESVAFDNGSLALLARAAEGSMRDALSLTDQAIGFGDGGLAESDVRAM 323 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D + L +++A+++ + + ++A+I + A+ ++ A L ++ +LH++ + Q P Sbjct: 324 LGTVDRARVLDVLDAILDNDPKTLLAVIEQIASHAPDYVATLDDLASVLHQVTIAQWVPD 383 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + A+ R+ ++A + ++QL+YQ GR E+ +PD R +EM LLR +AF Sbjct: 384 AA-DPTASQSERIAKVAASTTVDEVQLFYQFAAAGRPEVQRSPDPRAALEMVLLRMIAFR 442 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + + V P P P A + P T + L +L Sbjct: 443 PAEVISD-------AHEVPPPKKTEPPVPPVDSVGAGAIETSGSAPSLTHEELRPPVRL- 494 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 P +A + V D + P P E P + Sbjct: 495 -----------APRVVADQPEKADAIPAPIDPVVDAPTSNPQPGPAESEPLEPPRVAADL 543 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 P W A L+L + E +A Sbjct: 544 PAPA-------------------------------------EWPAFFDDLALRGIAENIA 566 Query: 541 LNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 ++ S + L S L N + E + V + + A TP Sbjct: 567 MHCELRSVSGRTLSFVLDQSNAGLFNERHVAAIEEQFNAHLQPPVTIEVEVGVVGAA-TP 625 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 R + + A +++ D + T FDAE+ SI P Sbjct: 626 AARRAELEAARQKAAEDALAEDPVLTTFLADFDAEVIVGSIEP 668 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 277/645 (42%), Positives = 369/645 (57%), Gaps = 9/645 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP F VVGQ+HVL L + L R+HHAYLF+GTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPMQFDQVVGQQHVLEPLFHALEQQRLHHAYLFTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C +C EIEQGRFVDLIE+DAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 ALNCERGVSARPCGECPSCEEIEQGRFVDLIEVDAASRTKVEDTRELLDNVQYRPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT++SRCLQF+L+ALD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVVSRCLQFNLRALDR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QLE++L E++ H+ +AL LLA++A+GS+RDALSLTDQAIA G G+V ++V M Sbjct: 181 EQIVGQLEYVLENENVPHDAQALTLLAQSAKGSMRDALSLTDQAIAQGQGKVQVESVQRM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D L++A+ + V +E + + +L E+ ++HRIA++Q PA Sbjct: 241 LGHLADAHVHPLLDALASGDSGSVFEKFDELKSLVPDPLMILNELQRVIHRIALIQQIPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 +G L R +P +QLYY+ ++ G+KE PYA D + VEMTLLR L+F Sbjct: 301 MMGA--EDKTNTTEALLRKLPAEVLQLYYRIVIEGKKEAPYAVDPQSAVEMTLLRLLSFT 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E + P + +T ++ + A Q + + A Q + Sbjct: 359 FENPESGEEALTR--PPESNLDTITQSEQAEEAAHAGQHSGDTSIQSEADDTSALEAQQR 416 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK--KEAYRW 478 ++ + A A + A E LAS+ + Q EK ++ E Sbjct: 417 DIEAQAAQHRMSRPAEGVAEDNSVAPDEGLASLLNMRQDLSGHQEPEKKNSEIDIETPSE 476 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 + P Q + A P + A + D WAA V ++ L Q Sbjct: 477 QPHLPSRQPDKQHAEPVQTTPVSLSHIQQRFDSST-RRAADVDSWAALVDATAVQGLTRQ 535 Query: 539 VALNAWKEESD-NAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR 597 + LN+ E+ C+ + Q+ L + EAL + + E + + + Sbjct: 536 LLLNSVLEKVGHQQWCIWVTEEQQSLLSEKTVALAREALCEVLSAQGEYRFLVG-SQQMS 594 Query: 598 TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TPL +QAI +L QA+ + D+ L FDA DE SI Sbjct: 595 TPLLIQQAIDHYRLEQAKLWLQNDSGFNELLNSFDAVTDETSISA 639 >UniRef50_C4ZNJ5 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C4ZNJ5_THASP Length = 716 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 269/719 (37%), Positives = 364/719 (50%), Gaps = 79/719 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F +VGQEHV+ AL + L+ GR+HHA+LF+GTRGVGKT+I+R+LAK Sbjct: 1 MSYQVLARKWRPKSFGTLVGQEHVVRALTHALATGRLHHAWLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITA PCG+CD CR I+ RF D +E+DAAS VE+ LLD YAP +GRF Sbjct: 61 ALNCETGITAEPCGICDACRAIDADRFPDYVEMDAASNRGVEEMAALLDKAVYAPVQGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E +A EP AL+ LA+AA GS+RDALSL DQAIA G G+V + VS M Sbjct: 181 GHIVDHLTRILQAEEVAFEPGALRHLAKAASGSMRDALSLLDQAIAHGAGRVEEEQVSHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ DD ++++A+ + ++A+ + AR + ++A L + L+HR+A+ Q +PA Sbjct: 241 LGTVGDDHLYAVLDALAAGDVPALLAVADGMEARSLSFDAALQALATLVHRVALAQYAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +++ R+ +QL YQ + GR ELP APD G MTLLR AF Sbjct: 301 AIADEL--ERARILGYVERFDAEFLQLAYQVAVHGRDELPLAPDDYTGFTMTLLRLHAFR 358 Query: 361 PRMP--LPEPEVPRQSFAPVAP----------TAVMTPTQVPPQPQSAPQQAPTVPLPET 408 P P L P VP A A + P A A Sbjct: 359 PEQPAALGGPGVPSGPDAGRARAPALAAGGPAESGRAAESGVPAEVPARTVASAGIAGPA 418 Query: 409 TSQVLAARQQLQRVQGATKAKKSEPAAATRARP-----------------------VNNA 445 + V A + + E AA +P Sbjct: 419 PAAVPAPAAGADAAIPSAQQTVLEAAAPASMQPGSVPAAQQAVAPAPASAPPRRSAREEH 478 Query: 446 ALERLASVTDRVQARPV--------------PSALEKAPAKKEAYRWKATTPVMQQKEVV 491 A++ + VQ P P E EAY A Sbjct: 479 AVQPARAAPASVQDVPPWEDLPPEAYADSDLPPPREARNGHDEAYAASAGAHTGAISRAR 538 Query: 492 ATP-----------KALKKALEHEKTPELAAKLAAEAIER-------------DPWAAQV 527 P + L + PE A AA + W + Sbjct: 539 PEPRGGGARRAEEVPSRSAPLPAVRAPEPATSPAAPTQDAPAASGDAAALLALGDWRGLI 598 Query: 528 SQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLN--NRGAQQKLAEALSMLKGSTV 584 L L LV ++A + W E D + L L ++ RHL NRGA ++L + L G T+ Sbjct: 599 RALGLGGLVRELAQHCEWVECGDGVLQLRLSTAHRHLLDMNRGAVERLQDVLCAALGRTL 658 Query: 585 ELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + I D +TP + + + A+A ++ AD ++ L FDA L E +++P+ Sbjct: 659 AVRIAIGDISG-QTPAQRDAIERQVRHAEAVAALEADPFVRELIERFDATLVENTVKPL 716 >UniRef50_A0YC05 DNA polymerase III subunits gamma and tau n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YC05_9GAMM Length = 588 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 256/627 (40%), Positives = 350/627 (55%), Gaps = 41/627 (6%) Query: 18 VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCD 77 +VGQEHVL AL N L R+HHAYLF+GTRGVGKTSIAR+LAK LNC+ G+++ PCG C Sbjct: 1 MVGQEHVLKALINALDHNRLHHAYLFTGTRGVGKTSIARILAKCLNCDVGVSSEPCGQCS 60 Query: 78 NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFN 137 C I +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP GRFKVYLIDEVHMLS +SFN Sbjct: 61 ACLSISEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTAGRFKVYLIDEVHMLSTNSFN 120 Query: 138 ALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIA 197 ALLKTLEEPP HVKFLLATTDPQKLP TILSRCLQF+LK + E+I L+++L +E I Sbjct: 121 ALLKTLEEPPPHVKFLLATTDPQKLPATILSRCLQFNLKNMSPERIVVHLQNVLEQEMIT 180 Query: 198 HEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMV 257 +E AL LL R+A+GS+RDALSLTDQAI+ G G++ V +MLGT+D +VEA++ Sbjct: 181 YEEPALWLLGRSADGSMRDALSLTDQAISFGSGKLLEADVRSMLGTIDRSAVYEIVEALI 240 Query: 258 EANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELA 317 NG +V+A +N A ++ + L E+L LLHRIA+ Q P A N ++ ++ Sbjct: 241 AENGAQVLAAVNNMAEHAPDYLSALEELLMLLHRIAIAQAVPDATDNSFGD-GAKIIAMS 299 Query: 318 RTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAP 377 + D QL+YQ L GR++L APD R G EM LLR LAF Sbjct: 300 ALLTAEDTQLFYQLGLTGRRDLSLAPDLRSGFEMVLLRMLAFK----------------- 342 Query: 378 VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAAT 437 P +P P+ + +P E V +Q ++ T S Sbjct: 343 --------PAGIPQLPERSLTNSPV--SVEAPQPVKKPDAGVQSIKADTPVSFSSKLGPA 392 Query: 438 RARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKAL 497 ++ VN+ L+ +VT + P+ A + V A Sbjct: 393 QSSVVNDIQLQVDGAVTKAIGEEPLH-----------AVTVSESVAVPLAAPAPAPVPVA 441 Query: 498 KKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWK-EESDNAVCLHL 556 + E + + L+ + + D W A +L +V +A + + +DNA+ L L Sbjct: 442 VLVDDTEMSLDEKGPLSLDQLRPDSWNALFERLGFGGVVGNIASHCILVDVTDNAMSLQL 501 Query: 557 RSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARE 616 ++ L + ++ E L++ + V + I + TP + + E+ A Sbjct: 502 DAANATLFSDSYTARIQEHLTVTLNTPVTVKIEV-TPLSAETPALRKNRMQNERREAALL 560 Query: 617 SIIADNNIQTLRRFFDAELDEESIRPI 643 S+ D N+Q L FDA LDE S++P+ Sbjct: 561 SLKNDPNVQVLVSDFDAVLDEASVQPV 587 >UniRef50_B6EJ42 DNA polymerase III subunit tau n=8 Tax=Vibrionaceae RepID=B6EJ42_ALISL Length = 714 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 292/718 (40%), Positives = 396/718 (55%), Gaps = 79/718 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F DVVGQ HVLTAL N L R+HHAYLFSGTRGVGKT+IARL AK Sbjct: 1 MSYQVLARKWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GIT+TPCGVC C+EI++GRFVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKF+LATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL+ +L++E ++ + RAL L+A AA+GS+RDALSLTDQAIA G+G V+ VS M Sbjct: 181 DQIHAQLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTDQAIALGNGNVTADIVSMM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ ++EA+ N + +M+ IN+ A G+EW+ L E+ LH++AM Q PA Sbjct: 241 LGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGLAKEIAAQLHKLAMYQALPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L R+ L+ + P ++QL+YQ L R +LP AP + GVEM LLR +AF Sbjct: 301 TLDKTQPDA-ERIELLSGQLSPQEVQLFYQIALQSRNDLPLAPTEKTGVEMMLLRMVAFR 359 Query: 361 P-----------RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 P +P EP + AP + + + P + AP P+ Sbjct: 360 PVHAQAIEALPIAVPSMEPAAVNVAPQQPAPASRVQQV-IASAPNAEVPVAPKPMQPQAV 418 Query: 410 SQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE-- 467 SQ + + + + +E P + + ++ + P+ + Sbjct: 419 SQTVYSPVSNSQQSSSAPLDSTEAQPPVYDAPPMGESSQSDSAPVQNIPQEPIATPRSGL 478 Query: 468 -------KAPAKKEAYRWKATTPVMQQKEV-----------------------------V 491 ++ + T+P Sbjct: 479 LGVRNQLRSAKNNLSNTTTGTSPKKGSAASDKKKTSSVLERIAEKQHLAPRTQVSQLGTS 538 Query: 492 ATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNA 551 + + + K + K I + P++V+++ K+++ +A Sbjct: 539 VSQEKKPEEPYRWKASQPEVKKVVSDITPTKLKQALEHEKTPEMVQELVDETVKQDTWSA 598 Query: 552 VCLHL--------------------------RSSQRHLNNRGAQQKLAEALSMLKGSTVE 585 + + L RS+Q HL N A + +++ALS ++ Sbjct: 599 LAMSLALPKLVQQLVLNSSFEEHDDQVSLHLRSAQSHLINDKAHELVSQALSSALNKEIK 658 Query: 586 LTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 L I +PLE R+ +Y+ KL A +S+ D ++ + + AE+D+ES+RPI Sbjct: 659 LNIDISAEG--TSPLELREQMYQTKLQTAYQSLQQDPHVNFFMQRYGAEIDQESVRPI 714 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 270/734 (36%), Positives = 355/734 (48%), Gaps = 93/734 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP FA++ GQEHVL AL N L+ R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MAYQVLARKWRPGNFAEMAGQEHVLKALTNALNQDRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PCG C CREI +GRFVDLIEIDAASRTKVED R+LLDNVQYAP R R+ Sbjct: 61 CLNCEQGVSAIPCGECGVCREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYAPTRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS SFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKNLSP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I L H+L E++ E AL LARAAEGS+RDA+SLTDQAIA GDG++ + V M Sbjct: 181 QRIVSHLTHVLQAENVPAEEAALWELARAAEGSMRDAMSLTDQAIAFGDGKLEAKDVIEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ + L+ + + ++A +N A ++ +L + LLHR+A+ Q P Sbjct: 241 LGTIEKHVVIDLLRTIAAQDCAAMLAQVNHMAQFAPDYAYVLQALAELLHRVAVEQAVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N ++ ELA+T+ D QLYYQ L+GRK+L APD R G EM LLR +AF Sbjct: 301 GVDNSFGDQ-QQVSELAQTLTAEDTQLYYQIALMGRKDLALAPDPRTGFEMALLRMIAFR 359 Query: 361 P------RMPLPEPEVPRQSFAPVAPTAVMTPTQV----------PPQPQSAPQQAPTVP 404 P ++ P S +A P+Q + P+Q P Sbjct: 360 PNIKSARQIQAPSAASSAASADDDKESAQPGPSQTETAVAAQPAPAVEATPEPRQEIAAP 419 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSE-PAAATRARPVNNAALERLASVTDRVQARPVP 463 PE QV R + + + P + ++ + RP P Sbjct: 420 QPEPPQQVAEKRDTPSPQEPPRQGLSQQGPQKQEPSNQGEAPVIDAAPVTPAQPIERPPP 479 Query: 464 SALEKAPAKKEA--------------------YRWKATTPVMQQKEVVATPKALKKALEH 503 E P + Y + P K+ Sbjct: 480 GHSEAEPPPVDDYDAYFADDPGPSDADYGFSGYPAETGYPDDGSHAAPVANPQPKEERPQ 539 Query: 504 EKTPE---------LAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVC- 553 P + S+ VA N+ K+ + Sbjct: 540 AAAPAREPQGREAIAPPPKSVTESVPGLHPGPGEAGSVNTTPPVVAANSVKKSPAGPLTP 599 Query: 554 -------------------LHLRSSQRHLNNRGAQQ------------------------ 570 L + L R A + Sbjct: 600 PLEGEPTMQGMVWKDAVKRLAISGMTATLAQRCALEAVTPGLVIFTIDREHLDFFNEAQR 659 Query: 571 -KLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRR 629 +L A+S G V++ + ++ TPL++ + E QA +I D NIQ + Sbjct: 660 ERLRAAVSEFMGEAVKIEVSAGES-KWLTPLQYAERRRAELQQQAETAIRNDPNIQMMAG 718 Query: 630 FFDAELDEESIRPI 643 F A + E SI PI Sbjct: 719 RFGAAVIENSIEPI 732 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 248/684 (36%), Positives = 342/684 (50%), Gaps = 47/684 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL++ L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFNELVGQNHVSRALSSALESGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGVTSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E IA + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITKHLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + E+V L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPELG 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 I ++ +L++ I D+QLYYQ GR +L A + G EM +LR LAF P Sbjct: 302 LKYSEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQLAVTQEQGFEMCVLRLLAFRPL 361 Query: 363 MP----LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL------------- 405 P + EP + T ++ P P + + P Sbjct: 362 APNEILVSEPVQQNGQAEVGLNSQAQTAQEITPVSAVQPVEVISQPAMVEPEPEPEPEPE 421 Query: 406 ----------------------PETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVN 443 V + V + + P Sbjct: 422 PQPNQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQIEPEP 481 Query: 444 NAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEH 503 + E + + E K + + E VA K Sbjct: 482 ASTAEPIGLFEASNAEFSLAQDTSAYDLVSEPVIEKQSLVQAEIVETVAVVKEPNATDNS 541 Query: 504 EKTPELAAKLAAEAIER----DPWAAQVSQLSLPKLVEQVALNAWKEES-DNAVCLHLRS 558 + P+ KL ++ +E + W L V+++A + H+ Sbjct: 542 QLMPQDILKLPSQTLEGEWTLEKWEFWFRNSQLSPAVQELAQHGVMTGEIGGNTVFHIPQ 601 Query: 559 SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESI 618 ++ QQ L EAL +T + T+ TP + E+ +A E + Sbjct: 602 EYENMLT-QLQQALIEALKQQWPNT-QFTVEYGAV-NTATPYVMQSVRKEKAFHRATELL 658 Query: 619 IADNNIQTLRRFFDAELDEESIRP 642 I++L FD EL ++P Sbjct: 659 QQQPVIKSLIETFDGELQNIQLKP 682 >UniRef50_B9ZJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJR0_9GAMM Length = 587 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 263/643 (40%), Positives = 339/643 (52%), Gaps = 74/643 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+QVLARKWRP F D+VGQ HV+ ALAN LS R+HHAYLF+GTRGVGKT+IAR+LA+ Sbjct: 1 MSHQVLARKWRPGRFEDLVGQPHVVRALANALSGDRLHHAYLFAGTRGVGKTTIARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C +C EI +GR +DLIE+DAASRT+V+DTR+LLDNV YAP GRF Sbjct: 61 CLNCETGITATPCGECRSCVEIAEGRHLDLIEVDAASRTRVDDTRELLDNVSYAPTAGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK + Sbjct: 121 KVYLIDEVHMLSEKSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFNLKPMPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L IL E + EP AL L AAEGS+RDALSLTDQAIA G +++ M Sbjct: 181 ALIAEHLTRILEAEGLQAEPGALLRLGEAAEGSMRDALSLTDQAIAYGGDRLTESDACDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L + L++A +G +M + E G +W LL E+ L+HR+A+ QL Sbjct: 241 LGLLPRTRLTGLLDAAFAGDGPGLMQGLQELKGLGPDWSRLLDELAALVHRVAVEQLVRG 300 Query: 301 ALGNDMAAIELRM-RELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 G + R RE A I +QL YQ L+ G ++LP+APD +MGVEMTLLR LAF Sbjct: 301 EGGAEDDDAAERWARETAARIDAETLQLTYQILIHGARDLPWAPDAQMGVEMTLLRLLAF 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT-SQVLAARQQ 418 P P + A P++ P P P+ T + Sbjct: 361 RPEGPGEGAVSVERQGGTPATA-----------PRTGPSADPATARPDATMRSAPPPIPE 409 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 R + + ++ +P + Sbjct: 410 PPRERAQERVREPDPGS---------------------------------------DIGL 430 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 + P + E V +P+ + + E V +L+L ++Q Sbjct: 431 NESAPRPRDAEPVRSPEPDSGPFDWHRFAEGLPT------------GTVRELALHGELQQ 478 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 + D +V + + L + +L EAL G +V L IV+ P+ T Sbjct: 479 L--------DDESVVIAVAP--GTLYTDRTRTRLKEALETRLGHSVRLEIVDQTQPSQAT 528 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 P A E+ A A ++ D +Q L F AEL IR Sbjct: 529 PAARLAADAAERQASAETAMREDPVVQALGEAFGAELGTVRIR 571 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 245/702 (34%), Positives = 351/702 (50%), Gaps = 62/702 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+TF+D+VGQEHV+ AL N L GR+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 30 MTYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAK 89 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PCGVC +C +I+ GR+VDL+EIDAAS T +++ R++L+N QYAP G++ Sbjct: 90 SLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGKY 149 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPPEHVKF+LATTDP K+PVT+LSRCLQF L+ + Sbjct: 150 KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPVTVLSRCLQFVLRNMTA 209 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L+ E IA++P ALQLL RAA GS+RDALSL DQAIA G G+V+ V M Sbjct: 210 QQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQM 269 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G +D L+ +V +GE ++A E AA + ++ L E+ LL ++A++Q P+ Sbjct: 270 IGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPS 329 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL +D ++ + LA+TI IQLYYQ + G+++L APD G MTLLR LAF Sbjct: 330 ALAHDDPDSDI-LHRLAQTISGEQIQLYYQIAVHGKRDLGLAPDEYAGFMMTLLRMLAFA 388 Query: 361 PRM-------------------------------PLPEPEVPRQSFAPVAPTAVMTPTQV 389 P P P PE +A P++ Sbjct: 389 PLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEADAAQTPVQTASAAAMPSEG 448 Query: 390 PPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER 449 + Q+ VP E R + SE + N A + Sbjct: 449 KTAGPVSHQENNDVPPWEDAPDKTETAAGTARTSAKSIQTASEAETPPENQVSKNKAADN 508 Query: 450 L--ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTP 507 AS+++ P+ + + E + +A P + Sbjct: 509 ETEASLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGFPDNDCPPEDGVEIPPPDWA 568 Query: 508 EL-----------------------AAKLAAEAIERDPWAAQVSQLSLP-KLVEQVALNA 543 + + WAA V + + A ++ Sbjct: 569 NVLPADTAGGGTDEEAEAGGIGGNNTPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHS 628 Query: 544 WKEE---SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIV-EDDNPAVRTP 599 E + L + + R ++ K+ + L+ G + L D TP Sbjct: 629 AWTEYRSDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGRETP 688 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 + + E +A+ + AD Q + + F A+ ES+ Sbjct: 689 AMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPESLE 730 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 199/705 (28%), Positives = 292/705 (41%), Gaps = 72/705 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q H+ L N ++ R+ HA SG RG GKT++AR+LAK Sbjct: 1 MSYLVLARKYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC G T PCGVC +C+EI VD+ EID AS VE R+L +NVQYAPA G + Sbjct: 61 AMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPALGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNALLKTLEEPP HV F+LATT+ K+PVTILSRC ++ K + + Sbjct: 121 KVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L + E+ E ++L +AR + G +RDALSL DQ +A G+ S + V + Sbjct: 181 DDIVGHLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +L +A+++ + + +++ ARG + + ++ ++L L + +V+ Sbjct: 241 LGVAGRKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRD 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P L + M+E P + L + +P R+ +E+ L+R Sbjct: 301 PGPLLDIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQPRLALEVALIRICE 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTA------VMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 P + + + A + P P+S AP P T S Sbjct: 361 ITPAVAIDSLVAALEVLASQPASKDQIINIGPASGPAPALPESGGGSAPPAPEETTASAA 420 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRAR-------------------------PVNNAAL 447 AA Q + A ++EP AA Sbjct: 421 EAAPQHEESTPVAASDPQTEPEPQEALAPEPEPEPEPEKEVTPEPEPEPEPPEEKPQAAP 480 Query: 448 ERLA---------------SVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVA 492 E A A P Y + P++ E Sbjct: 481 EPQAPVESAPPEPEEESIPEQAADSDAYQADDESPYYPEPDPTYAAADSEPIIPDMEPDY 540 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIER---------------DPWAAQVSQLSLPKLVE 537 P + + AA A DPW A + ++ Sbjct: 541 GPPQYETREVQPYVVQEAATPEEPAAPAPEPEEDEPEPPPFEGDPWKAFSKDVQEKSIML 600 Query: 538 QVALN--AWKEESDNAVCLHLR---SSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + L KE L S+ LN Q L L G V+ I E Sbjct: 601 GLTLEKCRLKEYEKGRFVLETDGAPFSRDQLNTPENQTILTGVCKSLFGRKVQFVIEEPS 660 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 P+ + E +A + ++ R F ++ E Sbjct: 661 EENRTAPVMNQAEKRRELEQEA----LNHPLVEEAVRIFGGKVVE 701 >UniRef50_C9PPQ1 DNA polymerase III subunit gamma/tau n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PPQ1_9PAST Length = 741 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 282/742 (38%), Positives = 392/742 (52%), Gaps = 100/742 (13%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+TFADVVGQ H+L AL+NGL R+HHAYLFSGTRGVGKTSIARL AK Sbjct: 1 MSYQVLARKWRPKTFADVVGQSHILIALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G+TA PCG C++C+ IE+GRF+DLIEIDAASRTKVEDTR+LLDNVQY P +GR+ Sbjct: 61 GLNCVNGVTAEPCGECEHCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRC+QFHLKAL+ Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI LE IL +E I + AL+ LA+AA+GS+RD+LSL DQAIA +G ++ V+ M Sbjct: 181 TQIAQHLEFILKQESIPFDFLALEKLAKAAQGSIRDSLSLADQAIAMSNGNITLNVVNEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 LG LDD+QA+ ++ + + NGE +M +I A +G +W+ L ++ LH+IA+ QL Sbjct: 241 LGLLDDNQAIDILYTLQQGNGENMMKIIQAIAEKGSDWDLFLRDIAEKLHQIAVKQLLPK 300 Query: 298 ----------------SPAALGNDMAAIELRMRELARTIPPT-----DIQLYY------- 329 +P L I +ELA + P + Sbjct: 301 DRLDESNQLDFLATLITPDDLQFFYQVIVAGRKELAFSPTPRIGVEMTLLRALAFHPKLI 360 Query: 330 --QTLLIGRKELPYAP--DRRMGVEMTLLRA---LAFHPRMPLPEPEVPRQSFAPVAPTA 382 + + + + ++ VEM +L + + Q+ + P++ Sbjct: 361 NSNIVESTQPQSSVSSVNNQTAYVEMPVLSQNIKSQYASNLNTRTVPKTAQNTSQQIPSS 420 Query: 383 VMTPTQVPP--QPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG---------ATKAKKS 431 + P +P +S Q E+ S+ A + L + + KKS Sbjct: 421 NVVPNNMPAVDAQRSYSQPITLKNTVESDSEYSVALEALAELDKLDNTSLSSLQKEKKKS 480 Query: 432 EPAAATR--ARPVNNAALERLASVTDRVQARPVPSALEKAPAK----------------- 472 + + + R + E A + S +K P+K Sbjct: 481 DVVSLQKTIDRVTEETSPEMTALPVIETKPFEQKSFTQKQPSKLLKSSTQPRMIVSNSID 540 Query: 473 ------------------------------KEAYRWKATTPVMQQKEVVATPKALKKALE 502 E YRW+ + P + + + TP LK++LE Sbjct: 541 ISEESVEVRQSAVENEIEIDSDEVAEGENLAETYRWEWSNPELAKMQDGPTPSELKQSLE 600 Query: 503 HEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQR 561 + TPEL K+ + + D W V L + L +++ALN E+S V L + + + Sbjct: 601 KDITPELREKVILLSRKEDVWTNIVESLDINNLTKELALNCALIEKSGGRVTLGIHTEKS 660 Query: 562 HLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIAD 621 HL R + L E L+ +EL I D +TP ++ + Y+ +A+E + D Sbjct: 661 HLEKRTFVKNLTEELAKYYAEQIELEIRVSDE-ITQTPTDFYRQTYKMLREKAKEDLQQD 719 Query: 622 NNIQTLRRFFDAELDEESIRPI 643 +Q F+ ELD S++P+ Sbjct: 720 KKLQLFLTEFNGELDLASVKPV 741 >UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Bacteroidales RepID=C3QNI8_9BACE Length = 621 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 158/637 (24%), Positives = 264/637 (41%), Gaps = 22/637 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T C C++C + R ++ E+DAAS V+D R L++ V+ P G++ Sbjct: 63 INCMTPTADGEACNQCESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ ++E I EP AL ++A A+G +RDALS+ DQ ++ G ++ ++V Sbjct: 183 EDTVNHLSYVASKEGITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL-SP 299 L LD + L + +E + L N+ +G + + + + + + Sbjct: 243 LNVLDYEYYFRLTDCFLENKVSDALLLFNDILNKGFDGSHFITGLSSHFRDLLVGKDPVT 302 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L A+I R +E A+ P + + + ++R+ VE+TL++ Sbjct: 303 LPLLEVGASIRQRYQEQAQKCPLPFLYRAMKLCNECDLNYRISKNKRLLVELTLIQVAQL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + T Q + QQAP P + + A Sbjct: 363 TTEGDDVSGGRGPKKTIKPVFTQPAAAQQPQVASATQVQQAPVHSSPSSVTTQAANGTTA 422 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 Q Q + + PA+ A + + + + + + K Sbjct: 423 QHPQASAAVQPGAPASPGAASSAPSQGAGVAQTAKEERKIPVMKMSSLGVSIKNPQRDQV 482 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 + V P+ + + E+D A ++ ++ Sbjct: 483 SQNATTTYVPKVQQPEEDFMFNDRDLNYYWQEYAGQLPKEQDALAKRMQ------MLRPA 536 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK-GSTVELTIVEDDNPAVRT 598 LN + + + + + +L + L S V +T+ + Sbjct: 537 LLN-----NSTTFEVVVDNEFAAKDFTALIPELQDYLRGRLKNSKVMMTVRVSEATETVR 591 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 P+ + + + L+ F EL Sbjct: 592 PVGRVEKFQMMAQ--------KNQALMQLKDEFGLEL 620 >UniRef50_Q47XQ9 DNA polymerase III, gamma/tau subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47XQ9_COLP3 Length = 715 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 268/716 (37%), Positives = 370/716 (51%), Gaps = 76/716 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++GQEHV+ LAN LS R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT PCG CD C +I+QGRFVDL+EIDAAS+TKV+DTR++LDNVQYAP+RGRF Sbjct: 61 SLNCELGITDKPCGKCDACIDIDQGRFVDLLEIDAASKTKVDDTREILDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKF+LATTDPQKLP+T+LSRCLQFHLKAL V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFILATTDPQKLPITVLSRCLQFHLKALTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L IL+ E ++HE L LLA+AA GS+RD+LSLTDQAIA G G ++ + M Sbjct: 181 KQIEDKLAEILSHEQVSHEQGCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + LV +++ + + +M L E A+ + L E++ L H+IA++Q+ Sbjct: 241 LGGIDQNWVYQLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + L ++ ++ + D+QLYYQ L GRK+LPYA D + +MTLLR AF Sbjct: 301 PFDLPADLLALL-KKFSQAMSAEDVQLYYQISLNGRKDLPYAFDEQAAFDMTLLRLFAFK 359 Query: 361 P---------------------RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 P ++ + A A T+ + + Sbjct: 360 PMQKSQLTNESTIDNIEQNTAISFDDDNLSKTTETLSNNADIAKAAVTEAVVESFAEVDI 419 Query: 400 APTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 + + + T Q Q L Q A + K+SE + + + + E A V Sbjct: 420 SDSAAATDNTQQTELNEQMLAIEQQADELKQSENNSLNQTPAQHVVSQEVKAPQQVPVVE 479 Query: 460 RPVPSALEKAPAKKE------------------------------------------AYR 477 E R Sbjct: 480 SYKEKQNTAPIVPNEQVGQLSIHSPVGSVLATRNMLRSRKKELEKQTKKSSDATLRQPNR 539 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER---------DPWAAQVS 528 + Q + PE ++I+ D WA + Sbjct: 540 ADNSKNKTQDSVNATVKPQVVSTESLVIAPEPDLPFHQDSIDPAKVTKANQVDKWAHMID 599 Query: 529 QLSLPKLVEQVALNAWKEE--SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 + L + Q+A++A E +D+ + L L + RHL+ A Q L A+ + + Sbjct: 600 SMQLTARIRQLAIHATISEKSTDDNLILKLDQATRHLSTEIAHQHLQSAICEFLARQITV 659 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 T+ + P + + I +++L A+ + D + L+ F A L+EESI P Sbjct: 660 TLDIVEETVAD-PYQIQGQINDKRLEYAKTLLKEDAVVIALQETFQASLNEESISP 714 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 165/645 (25%), Positives = 275/645 (42%), Gaps = 36/645 (5%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPATFDTVVGQRALTTTLKNAIANQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC C C++CR + R ++ E+DAAS VED R L++ V+ P G++ Sbjct: 63 INCLHPTADGEACNECESCRAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 LE++ +EHI EP AL ++A+ A+G +RDALS+ DQ ++ +G ++ Q+V Sbjct: 183 NDTVEHLENVARKEHIEAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGHITYQSVIEN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L +A +E + NE +G + + + + + + Sbjct: 243 LNVLDYEYYFKLTDAFLENRVSDCLLTFNEVLKKGFDGNHFITGLTSHFRDLLVSRDDET 302 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L A+I R + A+ P + + + ++R+ VE+TL++ Sbjct: 303 LQLLEVGASIRDRYQAQAQKCSPQFLYKAMKLCNDCDLNYRVSKNKRLLVELTLIQLAQL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 +P + S+ Q + + P P+ T +V Sbjct: 363 TGDNDVPG------GGQGPTKQTLKPAFNQGQPSSSSSQASNSQPYPQATHEVSGNYGST 416 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 Q A + P +AA+++ A+ T V A PS + KA +K+ K Sbjct: 417 APKQPAKPSA-----------PNGSAAVQQPAAPTTNVSAAAHPSPIPKANTEKKIPVMK 465 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP-----WAAQVSQL---S 531 A + + + P+A + A + + I + W ++L Sbjct: 466 AGSIGISIRRQAVQPQAANNGPVNTAATVPADQTYEDYIFNEKNLNYYWREFATRLPKEE 525 Query: 532 LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK-GSTVELTIVE 590 + + + + + + ++ L +++T+ Sbjct: 526 AANAARMMNMQPHLLKDQTTFEVAVDNDMVQKYMSQLAPQIETHLRQQLHNRKIKMTVRV 585 Query: 591 DDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 + + ++ L+ F EL Sbjct: 586 SAANENLRAYSHVERFQMMS--------KKNPSLLKLKEAFGLEL 622 >UniRef50_A5EY35 DNA polymerase III, subunits gamma and tau n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EY35_DICNV Length = 665 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 226/660 (34%), Positives = 335/660 (50%), Gaps = 27/660 (4%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+TF ++VGQ+H+ AL+ L R+HHAYLF+GTRGVGKTS+AR+ AK L Sbjct: 2 YQVLARKWRPKTFRELVGQQHITQALSYALDHDRLHHAYLFTGTRGVGKTSLARIYAKSL 61 Query: 63 NCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC G +A PCG C++C EI+QGRF DLIE+DAASR +++T++LLDN+ YAP +GR+K Sbjct: 62 NCLINGTSAQPCGQCEHCLEIDQGRFPDLIEVDAASRRGIDETKELLDNLPYAPVKGRYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM +R SFNALLKTLEEPP HVKF+LATTD QK+P T+LSRCLQFHLK ++ E Sbjct: 122 VYLIDEVHMFTRESFNALLKTLEEPPPHVKFILATTDIQKVPTTVLSRCLQFHLKNINPE 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 Q+R L HIL E I +E AL LLA+AA GS+RD LS DQAIA G G V T V+ +L Sbjct: 182 QLRQHLAHILQVERIDYEAEALVLLAQAARGSMRDGLSFLDQAIAYGQGVVKTDDVAYLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + Q L+ + E++ V A++ E A ++ +L + L +I + QL Sbjct: 242 GAVPTAQIYRLLTKIAESDARAVRAILTELDAFSPDYMDVLRHVFQGLQQITVAQLQAQQ 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 N I+ + LA+ +P +QL+YQ + + +PY PD R+ +EMT LR +A P Sbjct: 302 NPN---EIDQTLVRLAQQLPVELVQLWYQIISDAWQSMPYQPDMRVALEMTFLRMIALQP 358 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 +P P + + +AP ++ +P+ L + Sbjct: 359 LLPETTISEKHIIPEPDNDVDLPPWRDDESEMNTAPLESSENDVPDNNDVDLPPWHDDES 418 Query: 422 VQGATKAKKSEPAAATRA-----RPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 T + A P + LE + + VP+ + Sbjct: 419 EMINTAPAEPLENDAPDNNGVDLPPWRDDELEMMNTAPAEASENDVPNDNDADMPPWRDD 478 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP-------------- 522 + + P L EL + Sbjct: 479 ELEMINTAPLESSENDVPDNNDVDLPPWHNDELEMNTVPLKSSENKSVIQLEQAVNQLQL 538 Query: 523 WAAQVSQLSLPKL-VEQVALNAW-KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK 580 W+ ++ L + + ++ + + ++++ L + S+ N L LS Sbjct: 539 WSQFLNTLPVEDVFLQSLVEQSIPVSFQNDSLQLAVLSAAASWVNEQRLADLTRILSASC 598 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 + ++I DD + T RQ ++ A++ ++ + ++TL F ++ +SI Sbjct: 599 ARKIAVSITFDDT--IATSAMLRQQESDQMHQMAKQKLLQNPVVRTLMTDFHGKIMRDSI 656 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 246/537 (45%), Positives = 316/537 (58%), Gaps = 2/537 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP++F ++VGQ HVL AL N L R+HHAYLF+GTRGVGKT+IAR++AK Sbjct: 1 MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+TPCG C C+EI++GRFVDLIEIDAASRTKVEDTR+LLDNVQYAP+RGRF Sbjct: 61 CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP +VKF+LATTDPQKLP TILSRCLQF LK + Sbjct: 121 KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E++ L H+L E++ E AL LL RAA+GS+RDA+SLTDQAIA G+G+V V AM Sbjct: 181 ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD Q ++ A++E + V+ + A +G +W +L E+L +LHR+A+ Q P Sbjct: 241 LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + N R+ LA+ +P D+Q YYQ LIGR++LP APD R G EM LLR LAF Sbjct: 301 GVDNGHGD-RDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P P + T P ++ A + Sbjct: 360 PADNYDAPRQPLKPVGISQATVDSRKAVADATPVASVAPAVSTAPVMAAPDPAFEALPPA 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 T A ++EPAA ++P + PV ++ Sbjct: 420 AAPMPTAAVRAEPAAQPESQPQAQPEPVEEVDLPWNEPKSPVAEKNAESAPDTGTVAEPV 479 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAI-ERDPWAAQVSQLSLPKLV 536 PV++ + P+ A+ + E+ A + + + Sbjct: 480 AEPVLETVSEQPDLTPMPTPAPASPVPDAPEAEPAQPVAEQQVTPAMLEAIPDSAYL 536 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 95/290 (32%), Gaps = 8/290 (2%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P EV P +P A P A A V + L Sbjct: 441 QAQPEPVEEVDLPWNEPKSPVAEKNAESAPDTGTVAEPVAEPVLETVSEQPDLTPMPTPA 500 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLAS------VTDRVQARPVPSALEKAPAKKE 474 A ++EPA + V A LE + D + + P + P + Sbjct: 501 PASPVPDAPEAEPAQPVAEQQVTPAMLEAIPDSAYLSMNPDSMSSNSGPMGRDDEPPADD 560 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 Y + PE A W +L + Sbjct: 561 DYVEPDIDIDPASYSYLDELAHESVVELEAVEPEPAPAAKPATGLAADWLEVFPKLPISG 620 Query: 535 LVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 + +A N ++ LHL + L N Q++L +AL+ G T+ L+I Sbjct: 621 MTGSIAANCTLMAVDGDSWLLHLDPAHSALFNSTQQRRLNDALNQYHGRTINLSIEL-IK 679 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 P TP + + E+ QA SI AD IQ + + F A + E++I+P+ Sbjct: 680 PEQETPAQAASRLRAERQRQAEASIQADPYIQQMLQQFGAVIREDTIQPV 729 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 255/655 (38%), Positives = 346/655 (52%), Gaps = 85/655 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++FA++VGQ HVL AL N L R+HHAYLF+GTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFAEMVGQGHVLQALTNALDQSRLHHAYLFTGTRGVGKTTVARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++TPCGVC C EI+QGRFVDLIE+DAASRT V+DTRDLL+NV YAP RGRF Sbjct: 61 ALNCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHM S+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+L+AL + Sbjct: 121 KIYLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLRALPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ L +L +E+IA EP AL L+A AA GS+RDALSL DQAIA G++ T VS + Sbjct: 181 SQIQQHLADVLQKENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFTGGKLDTVQVSQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +++A+ + + +R+ AL++EA R +E LL + + +H++AM Q + Sbjct: 241 LGLSDHQIIWDMIDALYQQSADRLFALVDEALDRAVEPAILLAQFIESIHQLAMGQWIQS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++I P +QL+YQ GR+++ ++P+ R+G+EMTLLR LAF Sbjct: 301 MSAAANPPPDE-----LKSIDPQLLQLWYQIATTGRRDMAWSPNARIGLEMTLLRMLAFQ 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + A + A P + V AA+ + + Sbjct: 356 PGG------------------------EASNGAVKATEPAAVHSYPSDSRSVSAAKTKPE 391 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 RV + +SEP R+Q E A+ + K+ Sbjct: 392 RVASSITQPESEP------------------ETKARLQKSAEHRVAEPMVAQTMPVQDKS 433 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 V + L E ++ + +A Sbjct: 434 DHDVPDHSG------HARAQLTDLPWHEWVERIPGQPG------------------RNLA 469 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR--- 597 D + L + + N A++ L LS T ++ I+ N Sbjct: 470 DRCHINIVDGQIQLVVAPQYEVIANARARESLLSQLSK-LADTSKVKIIIGQNDTASDRA 528 Query: 598 ----------TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP E R Q R+S++ +Q L+ A+L EESI P Sbjct: 529 TSEISAQAAITPAERRNQEEINLQQQRRQSVVQHPVVQLLQEQAGAQLVEESILP 583 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 246/643 (38%), Positives = 345/643 (53%), Gaps = 75/643 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP++F +VVGQ+HVL AL NGL R+HHA+LFSGTRGVGKT++AR+ AK Sbjct: 1 MSYLVLARKWRPKSFEEVVGQQHVLRALINGLDQNRLHHAFLFSGTRGVGKTTLARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+++TPCGVC +C E++ GRFVDLIE+DAASRTKV+DTR+LLDNVQYAP++GR+ Sbjct: 61 SLNCEQGVSSTPCGVCQSCTEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS SFNALLKTLEEPP HVKFL ATTDPQKLPVTILSRCLQF+L+ L++ Sbjct: 121 KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTDPQKLPVTILSRCLQFNLRRLEL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI L ++L +E I EP AL+ LARAA+GS+RDALSL DQAIA G G+V++++V M Sbjct: 181 TQISDHLRYLLEQETIKAEPEALEQLARAADGSMRDALSLLDQAIAFGGGEVTSESVFQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++ DQ + +++A+++ +G+ ++A E AA G ++ + +L L +IA +QL P Sbjct: 241 LGSISQDQLILILDALLKQDGKALLAQSAELAALGRDFHVVFDFLLSALQQIATLQLVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A ++ ELA P IQL YQ L G+++L +A D + G +MTL+R L+F Sbjct: 301 --LEPVEANSPQLTELAAQFDPETIQLLYQIALHGKRDLSWAADPKSGFDMTLMRMLSFQ 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P + P + P V +P S+ + + Sbjct: 359 PTTPPEVGDEPLKKSPPPRKPVVSSP---------------------PASEAMTTKSVSV 397 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A K EP A + + + P P W Sbjct: 398 STSPAVKQALIEPDIAPKPQIKPDVIAAN----------EPEPIDNTLISVDLSPANWTQ 447 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 ++ + ++ E+ + +Q Sbjct: 448 IIAELKLSALAHQLAENSALVKCEQQSVYLSLSPELGHLA------------TDNSKQKL 495 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 A ++ + L + G T+ + Sbjct: 496 QKALSKKLGQDLKLVFADADTTFET---------------GPTLAVE------------R 528 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +QA+ + QA ESI D ++ ++ F+A + E SI+PI Sbjct: 529 AEQQAVKQ---QQAIESIHNDPTVEIIKNTFNARIIEHSIKPI 568 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 182/641 (28%), Positives = 293/641 (45%), Gaps = 55/641 (8%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SYQV+ARKWRPQ+F DVVGQ H+ L+N L GR+ HA LF+G RG GKTS AR+LAK Sbjct: 18 SYQVIARKWRPQSFTDVVGQNHITQTLSNALKNGRLPHALLFTGPRGTGKTSSARILAKA 77 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 L C PC C +C EI G +D+IEID AS V+ R+L D V + P+ G++K Sbjct: 78 LRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSGKYK 137 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS +FNALLKTLEEPP HV F++ATT+ K+P TILSRC +F + + Sbjct: 138 IYIIDEVHMLSTSAFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRISTR 197 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L+ I + E + + AL ++AR +GS+RD+ SL DQ I +G ++ +V +L Sbjct: 198 SITERLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTRASVVEIL 257 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D + A+++ N + V+ +I + AA G E ++L ++ + ++++S A Sbjct: 258 GLTDRALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQDLLEMIRNLLLIKVSEAQ 317 Query: 302 LGNDMA---AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + + E+A+ +P DI + + L G ++P A D R+ +E+TLLR + Sbjct: 318 ASQILEMPDSELQALSEMAQRLPEEDIHMLFDMALKGGSDIPRAQDPRIVLEVTLLRMAS 377 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + L + + P P P V LP + Q+ Sbjct: 378 APKLVDLK--TLLQGGAIPSHSAGGARPY------------VPPVSLPVKGHDRIEESQK 423 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + +A K+ A+ A + A A PVP+A + Sbjct: 424 VLDGPTGLEAMKAALNKASSAASSLKSNPAPAAKPAATAPAAPVPAAQPTPVVES----- 478 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 PK + E+ L + VE Sbjct: 479 --------------KPKIASGSTSKERWVNFVELLRQDDAL------------FAAKVEN 512 Query: 539 VALNAWKEESDNAVCLHLRSS----QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 + + +E + L + + + + ++KL + G+ ++ + Sbjct: 513 LL---FVKEEGKLISLGVPVKLAFLKDQMADAQVRKKLQGFIDSYWGAGYSFEVLMSRDQ 569 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 + +Q + R II + ++ + F ++ Sbjct: 570 VGESAQAIQQKKVQMAEEDLRNKIIENPMVKAAQTVFKGQI 610 >UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Bacteroidales RepID=C6ITP2_9BACE Length = 619 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 161/638 (25%), Positives = 268/638 (42%), Gaps = 26/638 (4%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ + T L N ++ ++ HAYLF G RGVGKT+ AR+ AK Sbjct: 3 NYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFAKT 62 Query: 62 LNCETGIT-ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T T C C++C + R ++ E+DAAS V+D R L++ V+ P G++ Sbjct: 63 INCMTPTTDGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + V Sbjct: 123 KVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRISV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ +E+I EP AL ++A A+G +RDALS+ DQ ++ G ++ ++V Sbjct: 183 EDTVNHLSYVAAKENITAEPEALNVIAMKADGGMRDALSIFDQVVSFTGGNITYKSVIEN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L + +E + L N+ +G + + + + + + + Sbjct: 243 LNVLDYEYYFRLTDCFLENRVSDALLLFNDVLNKGFDGSHFITGLSSHCRDLLVSKDAAT 302 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L A+I R +E A+ P + + + ++R+ VE+TL++ Sbjct: 303 LPLLEVGASIRQRYQEQAQKCPLQFLYRAMKLCNDCDLNYRASKNKRLLVELTLIQVAQL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + T Q ++ QQ P + AA + Sbjct: 363 TTEGDDVSGGRGPKQTIKPVFTQPAAAQQPQVASATSAQQTTVHTAPSPATAPSAANTAV 422 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTD-RVQARPVPSALEKAPAKKEAYRW 478 ++ Q + + + P A + V K P + +A + Sbjct: 423 RQPQVSVASGAAAPVNTASAPSQSAGISSISKEERKIPVMKMSSLGVSIKNPQRDQAAQN 482 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 A V Q + + E A +L E + A ++ + + V Sbjct: 483 TAKNNVAQVQIQPEEDFIFNDRDLNYYWQEYAGQLPKEQV------AIAKRMQVIRPV-- 534 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK-GSTVELTIVEDDNPAVR 597 + N+ + + + + +L L S V +T+ + Sbjct: 535 LLNNST------TFEVVVDNEIAAKDFTALIPELQTYLRGRLKNSKVAMTVRVSEPTETV 588 Query: 598 TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 + + + + L+ F EL Sbjct: 589 RAVGRVEKFQMMAQ--------KNQALMQLKDEFGLEL 618 >UniRef50_C6BXI6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXI6_DESAD Length = 638 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 287/650 (44%), Gaps = 24/650 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L K+RPQTF +V GQE V T L+ + ++ AYLFSGTRGVGKT+IAR+ AK Sbjct: 1 MSTSNLTAKYRPQTFGEVAGQEAVKTILSRAAAQDKVAPAYLFSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ TA PC CDNCR+I G VD++EIDAAS KV+D R L +++ YAP R+ Sbjct: 61 ALNCKNAPTAEPCNECDNCRQITAGVGVDVVEIDAASHGKVDDARRLKEDIGYAPIEFRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ +FNALLKTLEEPP H F++ATT+ K P TI+SRC + K L Sbjct: 121 KVFIIDEAHMLTVQAFNALLKTLEEPPPHATFIMATTETHKFPATIISRCQHYAFKMLTN 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +++ L +ILN E I E A+ L+A+ GS+RD++SL Q +A G ++ + V ++ Sbjct: 181 DELIAHLSNILNMEQIEFEQGAVDLIAKRGAGSVRDSMSLLGQVLALGSEKLLEEDVRSI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +L++A+ + V + + RG++ + E+ + ++ S Sbjct: 241 LGLAGRDVFFTLMQAIHGRDLVAVGDTVQQVLGRGLDLGFFIRELGNCWRNMFLLNQSGE 300 Query: 301 A---LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L + + A+T + I +Q + G++++ + + M +E+ LL Sbjct: 301 RAVPLLGLSSEEAAEFMKWAQTFDRSFIHACWQMTVDGQRKVMTSLEPAMALELLLLNMA 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAP---TVPLPETTSQVLA 414 + + + + P P P + P +T + Sbjct: 361 SLTDLISMERAGALASAAPSPQQAPQAAPAVPNQAPPQTPPPSQPMGQQPGGQTPPWQNS 420 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 +Q +Q+ RP+ A S+L A + Sbjct: 421 PQQGMQQQVPPQNQGMQPQGMGANGRPMGRTESGSPAGNRSANDMGADDSSLPDAAGLQT 480 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 + P + + P + P A ++ + + + V+ Sbjct: 481 DSDLNSLVPQSENPAPESIPPLERVPEPAPAKPSFPASVSG-PRDFEGFLQYVADSGANG 539 Query: 535 LVEQVALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + E D + L +S Q + R ++ + +S G VEL I Sbjct: 540 STSGL-SKCKGELIDGKLVLTCANSFHQGQVAGRESRGVVERLVSEYFGPEVELEIQISS 598 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 R+ + R+ + + +++ + F A + SI P Sbjct: 599 KGKRRS------------RQEIRDDVESHPDVKRVMDAFGASII--SIDP 634 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 192/644 (29%), Positives = 307/644 (47%), Gaps = 31/644 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ F++V+GQ+HV L N + RI H Y+FSG RG+GKT+IAR+LA Sbjct: 1 MSYQVLARKYRPQKFSEVIGQDHVTRTLKNAIEQQRIAHGYIFSGHRGIGKTTIARILAM 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC++ + PCGVCD+C+E++ G+ VD+IEIDAA+ +++ R+L + +Y PAR Sbjct: 61 ALNCQSADHPVSEPCGVCDSCKEVKAGQSVDVIEIDAATNRGIDEIRELREAARYRPARD 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y++DE H ++ +FNALLKTLEEPP H+ F++ATT+P+ +P TI SRC F A+ Sbjct: 121 RFKIYILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTEPEDIPQTIRSRCQHFSFHAV 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + I QL I +E I E AL +LA A +GS+RDALS+ DQAIA+ Q+ T V Sbjct: 181 KFDDIVLQLRDIAGKEGIGAEDDALAMLAEAGDGSMRDALSIMDQAIAACGNQLKTDDVR 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++GT+ D ++ + + E V+ I++ G + + L + +++ Sbjct: 241 GLMGTVSSDVLEDIMNGVHANSSESVLTTIDKLLIEGHSPLHFAKQAVRFLRNAMVAKVA 300 Query: 299 P--AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 +AL + R+ +A D+ + Q +L +L Y ++R +E+ LL+ Sbjct: 301 GKDSALLQISSDERERVARVAEQFSEEDLARFLQIMLRTHSDLGYKQEQRFHLELGLLKL 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + +PL E S AP + V AP A + P P +S+ AA Sbjct: 361 VHAQRMLPLEELLSGSASAAPSSAPRASVAAPVSRPSSPAPSAATSRPSPFESSRTAAAP 420 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + + + A A P A Sbjct: 421 RPSPFEVDRARKNEPKAEADAEITAKTPEFTAPAA------------------PTPMSAA 462 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK-- 534 + P +V + A+ P AA A E A +++L Sbjct: 463 PARGYEPQSAPAPMVTSSVGSAVAVAEVAPPPPAAAPAGETNIPAIRDAVLNELETAGQN 522 Query: 535 -LVEQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQQKL-AEALSMLKGSTVELTIVED 591 LV + W ++ V + L + L+ +KL A++ G ++ ++V Sbjct: 523 VLVHTLETGVWAANANEITVKVALSPAMIDLSMGPEVKKLVTAAVNKATGRPLKFSMVGG 582 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 +PA R A+ ++A + + ++ F AE+ Sbjct: 583 ADPATLAKPAPRTAVGPSARSRA----MQHPLVNYMQEKFGAEV 622 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 180/557 (32%), Positives = 275/557 (49%), Gaps = 8/557 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQTF+D+ GQEHV L N + GRI HA+LF+G RGVGKTS AR+LAK Sbjct: 1 MSYLVLARKWRPQTFSDLTGQEHVSQTLQNAIDSGRIAHAFLFTGARGVGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G++ PC VC C EI G VD++EID AS T V+D R+L +NV+Y P+R R+ Sbjct: 61 ALTCEQGMSPEPCNVCPACTEITAGTAVDVLEIDGASNTGVDDIRELRENVKYLPSRLRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPP HVKF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ +L HI+++E IA +L ++AR +GS+RD+LS+ DQ +A QV + V ++ Sbjct: 181 GKVVGRLRHIVDQEGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVVSL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D L A+ + V+ ++ G E++ L + +++ Sbjct: 241 LGVVDRRLLLDATAAVFGRDTRTVLDIVARVDEFGYNMRQFCGELIDHLRNLLILKAVGD 300 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + A +R+ A ++P D+Q + LL EL + R+ +EM L++ Sbjct: 301 GTDLLDLSEAELATLRQQAESVPLDDLQRHLTVLLRADGELGHTSFPRLVLEMALVKMAT 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP-LPETTSQVLAARQ 417 P +P+ + + V AP +PT PE T+ R Sbjct: 361 LAPAVPVDQLLERLNKIEEGSGGGVADARAQWRATPPAPAGSPTPARAPERTAATPPPRP 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 ++ + A + E A + ++ + R + +P A R Sbjct: 421 AERQAAPSAPAPRREEAKPVSEPRRTGDSWADFVALVKGAKPRLGSMLEQGSPLVVSADR 480 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKL-----AAEAIERDPWAAQVSQLSL 532 + P + AL+ A+ + + + + Sbjct: 481 LEIGFPEGAFALASLRDSDSQAALKELARQFFLAEPVLVMRPLAPDAAEAPPNLLEKKRV 540 Query: 533 PKLVEQVALNAWKEESD 549 K +Q L Sbjct: 541 EKEQQQTVLKQAATSHP 557 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 64/197 (32%), Gaps = 16/197 (8%) Query: 455 DRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLA 514 R Q R P A +P A A TP + E A P A E A ++ Sbjct: 388 ARAQWRATPPAPAGSPTPARAPERTAATPPPRPAERQAAPSAPAPRR------EEAKPVS 441 Query: 515 AEAIERDPWAAQVSQLS--LPKLVEQVALNAWKEESDNAVCLHLRSSQ---RHLNNRGAQ 569 D WA V+ + P+L + + S + + + L + +Q Sbjct: 442 EPRRTGDSWADFVALVKGAKPRLGSMLEQGSPLVVSADRLEIGFPEGAFALASLRDSDSQ 501 Query: 570 QKLAEALSMLKGSTVELTIVEDDNPAVRTP---LEWRQAIYEEKLAQARESIIADNNIQT 626 L E + L + A P LE ++ E++ +++ + + Sbjct: 502 AALKELARQFFLAEPVLVMRPLAPDAAEAPPNLLEKKRVEKEQQQTVLKQAATSHPAVAD 561 Query: 627 LRRFFDAELDEESIRPI 643 F L E + P+ Sbjct: 562 ALDVFGGTLAE--VEPL 576 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 163/651 (25%), Positives = 278/651 (42%), Gaps = 33/651 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RK+RPQTF DVVGQ V L + ++ HAYLF+G RG GKTS+A++ A+ Sbjct: 1 MAYIALYRKYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G T PC C CR I G+ +D++EIDAAS +++ R L ++V++ P GR Sbjct: 61 AINCEHGPTDHPCNECSACRSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGRK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ ++NALLKT+EEPP HV F+ ATT+ +KLPVTI+SRC ++ + + Sbjct: 121 KVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +L ++ +E + A QL+A A+G LRDALS+ DQ G ++ Q V + Sbjct: 181 DDIAQRLSYVAEKEGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMATGSITPQVVEEL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + + ++A+ +G +V++ +++A A G + ++ ++ + + + +++P Sbjct: 241 IGLVSKEWIIHFLDALRNGDGPKVLSYVHDALAEGRDATQIMEALIQHVRALLVGKVAPD 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL----- 354 A A + A ++ ++ Y ++ + + R +EM LL Sbjct: 301 ADELKVYDAFKDEFLAQANSVDFNELNQYVRSAQSIMNDAKQVDNPRTIIEMGLLVLCAK 360 Query: 355 ----------RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP 404 R A ++ + V PT PQ Sbjct: 361 LGSVDESLEDRVYALESAERSERNDLLNRMAQLEQRGPVAAPTMYGANAFVPPQGGYANS 420 Query: 405 LPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS 464 + V + Q T + P N + P + Sbjct: 421 FVSVDTTVTTQDAPMSSTQNTTIDAVPPSSGMGMTPPPMNGVGMTPPPMGAPGSTPPPMN 480 Query: 465 ALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWA 524 + AP P + + +A K + +E I Sbjct: 481 GVGMAPPPMGGV---GMAPPPNNGDTDSRKPTRNQAKGRAKKGVSTQAIISEQILSAQEY 537 Query: 525 AQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQR--------HLN---NRGAQQKLA 573 V Q ++ K ++ N +++ S+ HLN N + A Sbjct: 538 RNV-QSNVIKYLKDSNRNMTSTVIGQGQLVYVDQSKAVMAFKNTLHLNVMTNEVNLAEAA 596 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNI 624 +A + G V + I D V + ++ +A + + Sbjct: 597 DAFTYTLGYAVHVEI-VDALTQVYKDYKKAAGSTTQRQVKASQRPQE-PMV 645 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 192/605 (31%), Positives = 284/605 (46%), Gaps = 43/605 (7%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 M+ YQ L R+WRP+TFA+VVGQEH+ L N L GR+ HAYLF G RG GKTS A++LA Sbjct: 1 MAQYQALYRQWRPRTFAEVVGQEHITRTLRNALRTGRLVHAYLFCGPRGTGKTSTAKILA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 + +NC PC C NCR I G +D++E+DAAS +++ R+L++ + P GR Sbjct: 61 RAINCLAPREGEPCNECANCRRILAGNSLDVLEMDAASNRGIDEIRNLIEKIPLGPVEGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDEVHML++ +FNALLKTLEEPP H F+LATT+P+K+ TILSRC +F L Sbjct: 121 YKVYIIDEVHMLTQEAFNALLKTLEEPPAHAVFILATTEPRKVLPTILSRCQRFDFHPLT 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVS 238 V+ I +L+ + + EP AL LL+R A G LRDALSL DQ +ASG G V+ V+ Sbjct: 181 VQAIAGRLQEVAAANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASGTRGPVTAGQVA 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 LGT D L+L +A+ +G V+ L+++A A GIE LL ++L + ++++ Sbjct: 241 VTLGTARLDTLLALTDALATGDGAGVLNLVDKALASGIEPRRLLEDLLDHTRNLLLLKVD 300 Query: 299 PAALGN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P A + ++ AR + + L G L + R+ +EMTL Sbjct: 301 PGAGSLTGLLPEEVEQVAAQARQFDHHRLLDLMERLQQGGAALRRSNQPRVILEMTLAGF 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L VAP + A A P T + +A R Sbjct: 361 L--------------------VAPGPSLEGLARRVAELEARLAALEGSAPSRTREKVATR 400 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q + + A S R + +A + A Sbjct: 401 NQGEGGRPPVAPGSRADAGGQERGNSGPLEAPGAGSPAGRARVINRSREFPQAAGRDRAG 460 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 T + A+P L+ A+ E PE+ A E+I+ L Sbjct: 461 LAGPETATGLEPGSPASP-GLELAVVQEHWPEVLAAARRESIQ---------------LQ 504 Query: 537 EQVALNAWKEESDNAVCLHLRSSQ--RHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN- 593 + + + L +++ L G +QK+ +AL+ + G +++ I Sbjct: 505 AFLREGEPVAIDGDTLTLAVKADFHRGMLEQPGNRQKVEKALAAVFGRPLKVVITSGKPS 564 Query: 594 PAVRT 598 P T Sbjct: 565 PPGDT 569 >UniRef50_Q6FAW7 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=Q6FAW7_ACIAD Length = 711 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 243/715 (33%), Positives = 339/715 (47%), Gaps = 81/715 (11%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F ++VGQ HV AL + L GR+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPRNFIELVGQNHVSRALTSALERGRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETGIT+TPC VC C+ + +GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GRFKV Sbjct: 62 NCETGITSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFL ATTDPQKLP+T++SRCLQF L+ L V++ Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVDE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L IL +E I + A+ +A +A+GSLRDALSLTDQAIA G G V Q V MLG Sbjct: 182 ITSHLTTILAKEQIEADKDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D L+ A+ + RV L+ + + ++ +L +++ LH +A++Q P Sbjct: 242 LIDRTIIYDLILAIHQNQTARVSQLLMQFRQQALDVSLVLDQLISTLHELALLQYLPELS 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 I ++ +LA+ + D+QLYYQ GR EL + + G EM +LR LAF P Sbjct: 302 LKYSEEINQKILKLAKIVSAQDLQLYYQIACKGRSELQLSVTQEQGFEMCVLRLLAFRPL 361 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET----------TSQV 412 + + + S + T E SQ Sbjct: 362 SIDEVTVHASSQPSELQINQLPPAADSETDSSSRSELQHTNNRIEPDLEGSVVISVISQE 421 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALER----------------------- 449 + + Q V T ++ + E+ Sbjct: 422 AESFEAEQVVNHTTDDCQTAKTRQNKDVSSAVVEAEQENILVFNANSDDIVGIEQNKTAV 481 Query: 450 -------------LASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQ--------- 487 Q +P+ + + + T P+ Sbjct: 482 VLAAQDMPFFPVEEERQIANHQHIALPAERVEQADTYQPEPHQVTQPISDSSSEESSLDA 541 Query: 488 -KEVVATP-------------KALKKALEHEKTPELAAKLAAEAIER----DPWAAQVSQ 529 + +TP + A + E P+ KLA + +E + W Sbjct: 542 LADDESTPLIDLSIDTNEHKVQVTSAANDLEVMPQDILKLAEQELEGEWTLEKWEYWFRT 601 Query: 530 LSLPKLVEQVALNAWKEES-DNAVCLHLRSSQRHLNNRGAQQKLAEAL-SMLKGSTVELT 587 L V+++A + D ++ G +L AL S +K Sbjct: 602 SQLSPAVQELAQYGLMSGNIDGICTFNIPQQY-----EGMLSQLQHALESEVKSRWPNTQ 656 Query: 588 IVEDDNPAVR-TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 TP + E+ +A + + + ++ L FD +L ++ Sbjct: 657 FTVKYGKVNEITPYIKQIERKEKAFQRAIDLLQQNPVVKDLLNTFDGQLQNIQLK 711 >UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSN6_CHIPD Length = 634 Score = 514 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 159/642 (24%), Positives = 281/642 (43%), Gaps = 18/642 (2%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RPQ F+ VVGQ H+ T L N + ++ HA+LF G RGVGKT+ AR+LAK Sbjct: 3 NFIVSARKYRPQNFSTVVGQSHITTTLKNAIRNSQLAHAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE C C +C +G ++ E+DAAS V+D R L++ V++AP G++ Sbjct: 63 INCENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNA LKTLEEPP + F+LATT+ K+ TILSRC F K + + Sbjct: 123 KIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRITI 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+ I ++EHI E AL L+A+ +G +RD+LS D+ ++ G ++ Q Sbjct: 183 QDTVDHLQEICSKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSFTGGHLTYQNTLEH 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD D +++ +++ + + + +E +G E + L L + M + Sbjct: 243 LNILDYDYFFRVMDTVLQQDVATALLIFDEILQKGFEGDNFLNGWAEFLRNLLMSKEEKV 302 Query: 301 A-LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L ++ R +++A + P+ + L A ++R+ VEM L++ Sbjct: 303 LHLVEVSGNLKDRYKQMAGKVSPSYLITALHLLNETEINYRMARNKRLHVEMALIKLCFL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + L + + P ++ A +A T+ +AA + Sbjct: 363 QQAVTLVSDDQTGEVVKKKLVADGAQPQKLRSSFAQAAPEAKPAAGQAATTTSIAANEAR 422 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 ++ P T+ + + + K + Sbjct: 423 LTIETPVNNTGVPPQTVTQPAQPVQQQPPVSQAPANTQHTSSYNTTTTATAPK--PAQAP 480 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 P + + A K+ + K + A ++ D + + Q + +V + Sbjct: 481 TNAPKLTGLAAMKEALASKQQTQPAKA-VIPMTAGALSVYWDEFIDRFRQANKMTVVSNL 539 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGST-VELTIVEDDNPAVR- 597 L K +S +C+ R+ + + ++ + + LT+ D++ + Sbjct: 540 QLATIKLQSAEEICIVSRNIVQFRFMEEEKLAISAFFKDKFQNPGIVLTLQLDESQQTQD 599 Query: 598 ---TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 PL R+ + ++ L+ + ELD Sbjct: 600 IGPAPLSSREQFLKMTEKY--------PLVKELKEKLNMELD 633 >UniRef50_B7VL96 DNA polymerase III subunit tau n=11 Tax=Vibrionales RepID=B7VL96_VIBSL Length = 752 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 277/652 (42%), Positives = 366/652 (56%), Gaps = 47/652 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP F +VVGQ HVLTAL N LS R+HHAYLFSGTRGVGKT+I RL AK Sbjct: 1 MSYLALARKWRPTKFKEVVGQAHVLTALENALSQNRLHHAYLFSGTRGVGKTTIGRLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETGIT+TPCG C C+EI++GRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGITSTPCGECATCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPPE+VKFLLATTDPQKLPVTILSRCLQFHLK + V Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I QL+HIL +E++ EPRAL ++A AA+GS+RDALSL+DQAIA G+G V T V+ M Sbjct: 181 DNIHEQLDHILEQENVTSEPRALGMIAHAADGSMRDALSLSDQAIALGNGNVVTDTVAHM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD DQA+ L+EA+ ++ MA I A G+EW+ LL ++ LHR+AM Q P+ Sbjct: 241 LGTLDTDQAIHLLEAISSKQPQQAMACIQALAENGVEWDGLLSQLATQLHRLAMYQALPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L R+ +++T+ P DIQLYYQ +L GR++LP +P R+G+EM +LR LAF Sbjct: 301 TLDKAQPDA-ERLELMSKTLSPQDIQLYYQIVLKGRQDLPLSPTARVGIEMVVLRMLAFR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + QS +P A P Q Q + Q+ + P+PE QV + + Sbjct: 360 PAEQTVATAISTQSTSPAPAPAAQNPVQNQVQGVA---QSMSQPVPEPRQQV---QAPVG 413 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + + + + + + Q P AY + Sbjct: 414 SQPQVQQQAPVQQPVQQQQQNPAQYSDSQGYADHSGNQGYPEQDYPHSQYDVPPAYDERP 473 Query: 481 T----------------TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWA 524 + +PV Q +TP ++ +P + + R A Sbjct: 474 SYGADQPQQQQTNYQSQSPVQQPSAAPSTPPVSQEQPARATSPVSGLRHQLRSQRRSSAA 533 Query: 525 AQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRG-AQQKLAEALSMLKGST 583 + K A + + +Q+H + + L+ + + Sbjct: 534 TDNKGSTPKKAKATSAKTSVLDRV----------AQQHGGSERVSPASLSASSTE----- 578 Query: 584 VELTIVEDDNPAVRTPL-----EWRQAIYEEKLAQARESIIADNNIQTLRRF 630 + D+ P P E + + ++ +A E I + L + Sbjct: 579 ---KVTNDNEPYRWKPSKPVVKEVSKELTPTQIKRALEHIKTPEMVDKLLQE 627 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 3/287 (1%) Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 A+ R + +Q + + V P+ P P + +Q P + + Q Sbjct: 468 AYDERPSYGADQPQQQQTNYQSQSPVQQPSAAPSTPPVSQEQPARATSPVSGLRHQLRSQ 527 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARP-VPSALEKAPAKKEAY 476 + K + A AT A+ + + ++RV S+ EK E Y Sbjct: 528 RRSSAATDNKGSTPKKAKATSAKTSVLDRVAQQHGGSERVSPASLSASSTEKVTNDNEPY 587 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 RWK + PV+++ TP +K+ALEH KTPE+ KL E+I +D W+A + +L KLV Sbjct: 588 RWKPSKPVVKEVSKELTPTQIKRALEHIKTPEMVDKLLQESIAQDEWSATIQKLETAKLV 647 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 EQ+ALN+ ++D ++ L LR+SQ HLN AQ +L ++L+ + G L++ + Sbjct: 648 EQLALNSVFAKNDTSITLTLRASQAHLNTDRAQSELLQSLNTVLGEECHLSVEIGE--GG 705 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 TPLE R+ +Y+ KL A ++ D N+Q + R F AELD +S+RPI Sbjct: 706 ETPLELRERLYQGKLKDAFTALENDANVQFIERRFAAELDRDSVRPI 752 >UniRef50_B4RU47 DNA polymerase III subunits gamma and tau n=5 Tax=Bacteria RepID=B4RU47_ALTMD Length = 930 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 247/614 (40%), Positives = 342/614 (55%), Gaps = 12/614 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV++A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G A PCG C+ C+EIEQG +VDL+EIDAASRTKVEDTR+LLDNVQY P RGR+ Sbjct: 61 SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL +E +A E AL LLARAA+GS+RDALSLTDQAIA G QV V+ M Sbjct: 181 EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ A+V + V+ L+N+ A + +++ + E+ LLH+IA+ Q P Sbjct: 241 LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + + +LA+TI +QL YQ L GRK+LP+A D + EMTL+R +AF Sbjct: 301 ACKLETTSAKA-IFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ E ++ V + + Q+ P + T + Sbjct: 360 PNAPIAETVDEIENGRSEHNLPVNHASPSGGPGNVSKQEEPPLSETSAT---------ID 410 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + +A+ + + P + A + A + + Sbjct: 411 QGEAPIEAQPEHEPTSPKTPPQSPIADASTDLPSSAPAETVANEEEPTAVSNTQTNTAAE 470 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 T + A+ ++ + + A A+ + P A + + P L ++ Sbjct: 471 TDIAFEANLSSASASEAQEPQSNASVEDEEASPVAQYFDEPPLDAYMDDM--PPLQDESG 528 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 + S++ L + L + L K + N ++ Sbjct: 529 HYELDTPESERIVEPSPSAEEQLTSTADMLALRQKLKQKKAQDADAKSNSAANAKTQSAS 588 Query: 601 EWRQAIYEEKLAQA 614 E + K A Sbjct: 589 EIQARFTRSKTDSA 602 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 93/289 (32%), Gaps = 6/289 (2%) Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L P + + A T + S + L Sbjct: 644 LEAAPESEQSQDSITDHQSANTLNDGSDTQLLGGSEQASTNADFADNNDSGHDAFALDDF 703 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE---KAPAKK 473 ++ P P + + PVP A E K Sbjct: 704 EEDMPFSNDESDANYNPNPHVEDAPPWDTGKSVQDGHSVEPSLTPVPRANELESKEHGFY 763 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 E + TP + + +KL A + D W+ V Q+ + Sbjct: 764 ERGENAGERSFTRDALDFDTPLSTTYEGSLQAYLSDGSKLTH-ASQIDDWSNLVEQMPVA 822 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 L++Q+ L+A + N V L + SQ HL A+++L +A+ G VE++I + Sbjct: 823 GLLKQLVLHAAFSRNGNHVSLEIHHSQTHLLKDSAKKQLVDAIHHGLGENVEVSITLGEP 882 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP +Q I+ + A A I D IQ L FD + ++++ Sbjct: 883 --SSTPFALQQEIHAMRHAHAHSVIKTDETIQALLSTFDGSVLTDTVKA 929 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 137/374 (36%), Positives = 212/374 (56%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D+ SL++ M + + +++ + GI+ L + +L + + + L Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 + + ++E + + + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRYAISPLTLLEVTILRLIKPEIS 361 Query: 363 MPLPEPEVPRQSFA 376 + + Sbjct: 362 YDMMSLLARVEQIE 375 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 259/550 (47%), Positives = 329/550 (59%), Gaps = 11/550 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F VVGQ+HVLTAL N L R+HHAYL SGTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPHNFQQVVGQQHVLTALVNALEQDRLHHAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+TPCG C C EI+QG +VDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEKGITSTPCGECSTCVEIDQGCYVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+TILSRCLQFHLK L Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCLQFHLKCLTT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL HIL+ EH +E AL +A+AA+GS+RDALSLTDQA++ G G+V Q V M Sbjct: 181 EQISQQLVHILSREHCQYELSALNSIAKAADGSMRDALSLTDQALSHGAGEVLYQTVLDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L L+ +V + + MA I E ++ G +++ L VE+ LLHRIAM Q+ P+ Sbjct: 241 LGTLDHSHMLQLLRLIVSGDANKCMAKIAEVSSLGPDFDQLHVELASLLHRIAMAQILPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ + +++ L + P D+QLYYQ L GRKELP APD R +EMT+LR LAF Sbjct: 301 SVVD--TEHADKVKALCDDMSPEDVQLYYQITLTGRKELPLAPDPRSALEMTILRMLAFR 358 Query: 361 PRMPLPEPE-----VPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 P+ L PE P V T + P + Q+ Q +P Sbjct: 359 PQGRLQAPERDVTPAPVAIAPAVTETIIAAPVEQTVVSQAPVQATTPAVMPIAAPVPAQI 418 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 +QQ + + A A + A + +QA +E ++ Sbjct: 419 QQQAPQQVQQPVPESMPQPVAPAAEQRDEAVTNLNLEQNELLQAAQAMGHVEPKTVTPQS 478 Query: 476 YRWKATTPVMQQKEVVATP----KALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 + P + + TP ++ P A +A ++++ + Sbjct: 479 VEQQTADPQSVEPQNYVTPQIESPSVAPQDYAAPQPINTAPVAENSVDQGRKTRNFLRSR 538 Query: 532 LPKLVEQVAL 541 L ++ A Sbjct: 539 LGTTAKKSAA 548 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 105/276 (38%), Gaps = 1/276 (0%) Query: 369 EVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKA 428 + A + + VPP+ P T + + + Q Q+ Q + Sbjct: 539 LGTTAKKSAAAKSEQAPSSYVPPKKAVTPVIQHTPAMQSRFNAPASQPMQQQQAQQQSAP 598 Query: 429 KKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQ- 487 E + N + D+ PA+ A Q Sbjct: 599 AWQELPPLDSYQDQGNFQGQGNYQDQDQGGYHNQMPEPSAYPAQGFAEPAIRQIDRFSQV 658 Query: 488 KEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEE 547 K + +A + K+ A E DPW ++Q+SL V Q+AL++ E+ Sbjct: 659 KVDINDLSPAFQAQKSGKSTATAPLDNKLRDENDPWCCYINQMSLGGRVRQLALHSVMEQ 718 Query: 548 SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIY 607 + L + QR+ N ++Q+L++AL + VEL I +N TP + + IY Sbjct: 719 EPGRITLTMNPDQRYFANDKSRQQLSDALQQVLSEPVELVINFGENLNKSTPAQLEEIIY 778 Query: 608 EEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +++LA A +++ D IQ A +D+ SI P+ Sbjct: 779 QQRLANATKNLYDDKYIQFFMNRLGAVIDDSSIVPL 814 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 145/435 (33%), Positives = 231/435 (53%), Gaps = 3/435 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++ AK Sbjct: 1 MSYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C CR I G +++IEIDAAS V++ R + + V+Y P G++ Sbjct: 61 AVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 E I +L ++ +E + E RA++ +A+AA+GS+RDALSL DQ IA ++ V Sbjct: 181 ETISARLMELMEKEQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFYLGQDLTYDKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG +D + L+ ++E N + +I+E G E + + L + +VQ S Sbjct: 241 TLGAVDTEIFSRLLRQILEKNVTGAIGVIDEMVIEGRELGQFVNDFTWYLRNLMLVQSSD 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E A+ + + Y + ++ YA +R+ +E+ +++ Sbjct: 301 DMEDVLDISTENLALLKEEAQMVDTDILMRYIRIFSELSNQIRYAVQKRILIEIAVIKLC 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 S ++ + + + A + Sbjct: 361 KPEMEKDYGSLIDRVDSLEKKLEKGIVVTQASGDMAAGTTGSSAASAVLKKKELPKAIPE 420 Query: 418 QLQRVQGATKAKKSE 432 ++++ + S+ Sbjct: 421 DIKQIMSSWSGILSQ 435 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 266/664 (40%), Positives = 357/664 (53%), Gaps = 30/664 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFDQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGACGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I QL HIL +E + A++LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 GEIGTQLNHILTQEQFPFDAEAIKLLAKAANGSMRDALSLTDQAIAFGGGNVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVVALLKALTDADIGVLMHTCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 AAQQSL--YSAQIRAFAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMP-------------LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE 407 P P LPE + P + A V P P P Sbjct: 386 PEKPVKRWQPDAVAEIRLPEWQTPVAATAAAQAPHVNEPQFAETHTAEPHTAEPHSTEPH 445 Query: 408 TTSQVLAARQQLQRVQ-GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSAL 466 V A ++ Q A + ++ A A V+ + + V D Sbjct: 446 IAETVPAEKKTALIEQTSANQQVETAQADAVDMAEVSIEPADTVEQVFDAELEADAALIA 505 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 E+A +A + V A + + + + P + IE + Sbjct: 506 EQAVILSQAQSQGFNADSLNADTVNAEVEPQTQTVSTAQAPSIHISEPVADIEASVASLD 565 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 +P+L+ A ++ + + S+ + + +T+E Sbjct: 566 AQNSEVPELIGATAESSIVNPAMAETLVGSTSADNNSAAENTLDN-----NPTTNNTLEQ 620 Query: 587 TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQ---------TLRRFFDAELDE 637 +++ +P A+ + A D ++ FD+ Sbjct: 621 NGLDEHSPYGTEAEHSYPAMGDYAQESAPLDSYQDAYVELSSGSYNDDDFHHSFDSHAVP 680 Query: 638 ESIR 641 + ++ Sbjct: 681 DDVQ 684 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 105/286 (36%), Gaps = 4/286 (1%) Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 +A H +P PV P P ++ + ++ + +A Sbjct: 839 IALHQSVPSAASASGSVPADPVKPATYDRPPWEAAPEVASTAELIETTQVDSGNTDIADA 898 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q + S + A+ + Q+ S + + +A Sbjct: 899 GMAQGSDINDDSASS--GQGFLEASNIANDGQNNAADGNDSQSAEQGSDSKLQALQTQAR 956 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA--IERDPWAAQVSQLSLPK 534 A+E + E+A + W ++ L + Sbjct: 957 HQDKVQATALTPASKTALTQTASAVERTQEREVALSTLPISGHPLDLHWYKLMASLEVGG 1016 Query: 535 LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 V Q+A+N+ + + + L L+ +Q+HL A +L +ALS G+ + +V + Sbjct: 1017 RVRQLAVNSVCQTQSDPLPLLLKPNQKHLAADVAIVQLEQALSAALGNPRRVQVVIGIDA 1076 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 TPLE R+ ++E L QA +S+I D+N+Q L + AELD +S+ Sbjct: 1077 QRETPLELRKRFHQELLQQAHQSLIHDDNVQWLIQRMGAELDADSL 1122 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 147/421 (34%), Positives = 234/421 (55%), Gaps = 7/421 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT++A++ AK Sbjct: 1 MSYQALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PCG C +CR I +G +++IEIDAAS V++ R + + V Y P GR+ Sbjct: 61 AVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFHRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 + I +L ++ +EH+ E RA++ +A+A +GS+RDALSL DQ IA +++ + V Sbjct: 181 DTIASRLSDLMEQEHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFHLGEKLTYENVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D + L+ +++ + + ++ E G E L+ + + + ++Q S Sbjct: 241 VLGAVDTEVFSRLLRRILDEDVTGAIRILGELIDEGRELSQLVNDFTWYMRNLLLLQSSD 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + ++E A + P + Y + ++ +A +R+ VE+ +++ Sbjct: 301 DMEEVLDISKDNLEALKEEAALVKPETLIRYIRVFSELSSQVKFASQKRIMVEIAIIKLC 360 Query: 358 AFHPRMP----LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 L + P A Q +A + LP+ Q + Sbjct: 361 RPQMEKSYDSVLDRINSIEKKLEKGIPIAAQAAQTQDMQQAAASEPIVKKELPKAIPQDI 420 Query: 414 A 414 + Sbjct: 421 S 421 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 165/442 (37%), Positives = 245/442 (55%), Gaps = 3/442 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ+F D+VGQEHV L N + GR+HHA+LF+G RGVGKTS AR+ AK Sbjct: 1 MSYLVLARKYRPQSFDDLVGQEHVSQTLGNAIKTGRVHHAFLFTGARGVGKTSAARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++ PC VC +CREI G+ +D+ EID AS T V+D R+L +N++Y P+R R+ Sbjct: 61 ALNCEQGLSPQPCNVCQSCREISAGQGLDVFEIDGASNTGVDDIRELRENIRYLPSRSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS ++FNALLKTLEEPPEH KF+ ATT+P K+P+TILSRC +F + + + Sbjct: 121 KIFIIDEVHMLSTNAFNALLKTLEEPPEHAKFIFATTEPHKIPITILSRCQRFDFRKIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I+ R+L L+AR EGS+RDA S DQ IA V V + Sbjct: 181 PLIVARLKEIAAAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFCGDAVGEDDVQGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +D + +E+++ + R++ + G + E++ L + ++++ Sbjct: 241 LGMVDRRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVETLRSLVVLKVVPE 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P AL + +R L+ T+ D++ L+ EL + R+ +EM LLR Sbjct: 301 PEALLDATPDELEELRRLSATVELEDLERAVTVLVRTEAELAGSSFPRLALEMALLRLAH 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P V + + + P + A ++ P + Sbjct: 361 L-PSGRDVATLVRQVEDLQRRLESGVPPAERAQPASYASSESIVAERPAPAPVQAQVPEP 419 Query: 419 LQRVQGATKAKKSEPAAATRAR 440 Q A K S+ A ++ + Sbjct: 420 AQSTAVAAAGKGSDAQAESKPQ 441 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 163/473 (34%), Positives = 241/473 (50%), Gaps = 3/473 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRPQTF D+VGQEH+ LAN ++ G I HAYLF+G RG GKTS A++LAK Sbjct: 1 MAYIALYRKWRPQTFKDLVGQEHISRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCG C+ CR+I G +D+ EIDAAS +++ RDL + V++AP GR+ Sbjct: 61 ALNCEHGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ K+P TI SRC ++ K + V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I +L +I E + E AL ++A A+G +RDALS+ DQ A +G ++ + V + Sbjct: 181 EEIESRLRYITAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALAEGTITAERVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D + +A+ N + + ++ E G + + +L E+ L + + Q + Sbjct: 241 LGLVGHDWIYKMTKALAARNVQEALQILAELLRDGKDLKQILSELSLHLRSLMIFQAAGT 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + A + +++ A+ P + L E+ ++P R+ VE+ L+ Sbjct: 301 VEAMDLYAEPQDVLQDQAKLFAPEVLPRMIARLHEAMTEMKWSPQPRITVEVALMELCRP 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ--VLAARQ 417 E S P A ++ + ++A Q + T A Sbjct: 361 ELVASTQENAGQAASNGPRAASSNPADEARIAKLEAALAQVTALLKQATAGAGVRPAVAP 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 A + A A A + Q KAP Sbjct: 421 ATGVPTPAPAPAAAPAVTPAPADVPEEPAALDEAGLQVWNQLFQSLREQHKAP 473 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 247/529 (46%), Positives = 327/529 (61%), Gaps = 10/529 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++VGQ HV AL N L+ R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ GI+A PCG C +C++IE GR++DL+EIDAASRTKVEDTR++LDNVQYAP RGR+ Sbjct: 61 SLNCDEGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQF+L AL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ QLEH+L E + + AL+++A+AA+GS+RDALSLTDQAIA +G ++ QAV M Sbjct: 181 SEIKTQLEHVLTHEKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQTNGDINNQAVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + SL+ A++ +G +M + A+R + ALL +++ L H + QL P Sbjct: 241 LGLMDTHYSQSLLAALLAQDGAALMKEVANVASRNPNYVALLDDLIALTHLTQLSQLVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A D + +A+ P IQ+YYQ LL G+K+L +AP+ R+G EM +LR LAF Sbjct: 301 AAALD-ETNADYITHVAQNTNPQQIQIYYQLLLNGKKDLQWAPEPRLGFEMIMLRLLAFQ 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + QS PVA + + PLP T + Q+ Sbjct: 360 P--------IDTQSQQPVAVNTQPVQSNTTKASALRDILNKSKPLPSTAQNNDTTQPQII 411 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A AK SEP NN++ + S T + V + EA + Sbjct: 412 EPKPADVAKLSEPQNVAPDPLNNNSSTTQHVSTTVPAVEQAV-EPTIVSAVPNEAASEQL 470 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 T Q V +A +++ + + + + A D ++ V Q Sbjct: 471 VTQQHQHTNDVTDEQAQRQSEDEAYLQQSNLEHSLAAQFDDVISSAVDQ 519 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 104/296 (35%), Gaps = 6/296 (2%) Query: 352 TLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQ 411 + R L + + + + P + + + + + Sbjct: 549 AIARILRDRN-ISGAGKLSNAKETEQQNTANLSSANTRPSRFTANSSNSNEQNVTTNSDA 607 Query: 412 VLAARQQLQRVQGATKAKKSEPA--AATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + +R Q P A + + Q P Sbjct: 608 INHSRANNNAQQTHADNPPPWPNDFAGESEKKPQLPLAGSQNKAASQAQFESKPERKIDF 667 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE--AIERDPWAAQV 527 AK + +++Q P+ + + + ++ A ++D WA + Sbjct: 668 KAKHQTITENLAPELLEQINPQKVPEVVVAQPSIPAPDDFQSPISEIRFAHQQDEWAYLI 727 Query: 528 SQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELT 587 ++ L + Q AL++ + N + + + SQ+HL+ +Q+L ALS + V L+ Sbjct: 728 KRMGLGGRMRQFALHSIFTKQGNNLHIDVDESQKHLDTPMLRQRLDAALSSIYEHNVTLS 787 Query: 588 IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I + +P +Q I + QA + I +D+NI ++ F AE+DE SI+ + Sbjct: 788 INF-AKGVIDSPYLIQQKIDAGRHQQAIDVITSDDNIVQFQQLFSAEIDENSIQAL 842 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 145/430 (33%), Positives = 235/430 (54%), Gaps = 11/430 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y L RK+RPQ F DV GQEH++T L N + RI HAYLF GTRG GKT+IA++LA+ Sbjct: 1 MGYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAYLFCGTRGTGKTTIAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + +PC C CR I +G +++IEIDAAS V++ R++ + V Y P G++ Sbjct: 61 AVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTTGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEAHKIPITILSRCQRYDFRRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 + I +L+ ++++E E +A++ +A+AA+GS+RDALSL DQ IA +++ + V Sbjct: 181 DTIAARLQELMDKEGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLGEKLTYEKVLE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS- 298 LG +D ++ +++ + + ++E +G E + + + L + ++ S Sbjct: 241 NLGAVDTQVFSRMLRQILQQDTAGTIKTLDEIIIQGRELGQFVTDFIWYLRNLLLISTSE 300 Query: 299 -PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 P + A RM+E + + + Y + ++ YA +R+ VE+ L++ Sbjct: 301 HPEEAVDASAENLERMKEESSMVDAETLMRYIRIFSELSNQIKYASQKRVLVEIALIKLC 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 M L + V QS P + E + + + Sbjct: 361 QPVMEMNLDSLYDRVRVLEEKLKNGVTV--------QSLPTENYVRTRAENPEEQILKEE 412 Query: 418 QLQRVQGATK 427 ++ + A + Sbjct: 413 TVKPEKAAPE 422 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 186/730 (25%), Positives = 301/730 (41%), Gaps = 94/730 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV ARK+RP TF DV+GQ+HV+ L N + R+ HAYLF G RG GKTS AR+ AK Sbjct: 1 MSYQVFARKYRPLTFDDVLGQDHVVRTLKNAIEHNRLAHAYLFVGPRGTGKTSTARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G D C EI +GR +D++EID AS ++ RDL DNV++AP+RG F Sbjct: 61 ALNCSGGPKVDFDPHEDICEEIAEGRSLDVLEIDGASNRGIDHIRDLRDNVRFAPSRGNF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++ IDEVHML++ SFNALLKTLEEPP HVKF+ ATT+P K+ TILSRC +F L+ + Sbjct: 121 RIVYIDEVHMLTKESFNALLKTLEEPPPHVKFIFATTEPHKILPTILSRCQRFDLRPIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I L HI + E ++ A +A+ A+G +RDA S+ DQ ++ + Q V + Sbjct: 181 EIIAEHLLHIASAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFCGDHIEEQQVLHI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + ++ ++ L++E A G + L E++ + I + ++ P Sbjct: 241 FGITSRETVAHALALILNKELPSLLHLLHEQAEAGRDMSQFLSEIISAVREILVSKVDPE 300 Query: 301 ALGNDMAAI-ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA- 358 A + + + + EL + I + L ++ ++ ++R+ +EM L++A+ Sbjct: 301 ASFDSLPESSKEELAELVKRTHTDKILRLVEVLAETEDKMRWSTNKRLHLEMGLIKAVHT 360 Query: 359 -----------------FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAP 401 P ++ Q ++ PT P Q +P A Sbjct: 361 LAEASISDIIMALEGAPLATAAPASSSDLASQQEPSTFISSATAPTPAPRQNIQSPVAAT 420 Query: 402 TV----------PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLA 451 P+P+ + A+ +Q++Q P + Sbjct: 421 NPTPATEEHLMDPIPDFSLSSPASSPAVQKIQSTDAQASPHPTQEAEPQQETLTPAAPPT 480 Query: 452 SVTDRVQARPVPS----------------ALEKAPAKKEAYRWKATTPVMQQKEV----- 490 S+ + P + + + + + P E Sbjct: 481 SLAVAEEEFPYSATKLRTKTVPASEEITRHPDSDASDVSKFPTDSPEPTFMDPEENLPLE 540 Query: 491 ------------VATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE- 537 + + +A ++ P + ++ + I + W + Q+S ++ Sbjct: 541 RRTNSFFDNLFDTPSTSSQTQAPVEKEEPAVLSQQSGRTITEEDWKTVLEQMSAKFPLQA 600 Query: 538 QVALNAWKEESDN-AVCLHLRSS----QRHLNNRGAQQKLAEALSMLKGSTVELTIVED- 591 N+ D AV + S L + L ALS G++V ++I +D Sbjct: 601 DFLANSVFSGYDGVAVAISFHPSDRQGMDSLGTGPLRTALEAALSQYIGTSVTISIRQDF 660 Query: 592 -----------------------DNPAVRTPLEWRQAIYEE--KLAQARESIIADNNIQT 626 P TP + +E K S D I Sbjct: 661 SIPEPVQEELAPLPAPPPSASTIPAPKPHTPQKKTAEPVQEASKEENEDNSYYTDPLIDA 720 Query: 627 LRRFFDAELD 636 F A + Sbjct: 721 AMEIFRARII 730 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 183/611 (29%), Positives = 282/611 (46%), Gaps = 12/611 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ + L RK+RPQTF DVVGQ HV L N L + HAYLF G RG GKT++ARLLAK Sbjct: 1 MA-EALYRKYRPQTFDDVVGQTHVERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAK 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGR 119 L CE G T +P G C+ C+ I +G D+ E+DAASRT V++ R+ ++ VQ+AP RGR Sbjct: 60 ALLCEHGPTPSPDGTCEECQLIAEGAHPDVNELDAASRTGVDNVREEIIGRVQFAPTRGR 119 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHML+ +FNALLKTLEEPP HV F++ TTDPQK+P TILSRC +F L Sbjct: 120 YKIYIIDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTDPQKIPETILSRCQRFDFHRLS 179 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 E+I +L + E + E AL L+AR A+G +RDAL+ +Q IA G G V+ +A Sbjct: 180 NEEIVSRLGAVCMAEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAGNVTMDVANA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG+LD + + + + + E G + ++ + + + L+ Sbjct: 240 ALGSLDVNDMSEIAGHIGRRDAAACFTWMAEYVETGADLAQFARDLASYVRDMYVFSLTD 299 Query: 300 AALGN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A+G ++ + ++ E A+ + L L + + R+ E+ L R + Sbjct: 300 GAVGLSSASSSNQQQLAEDAKLYGTDRLAYILDVLGDLNTSLRSSTNPRLSFEIALTRMV 359 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET-TSQVLAAR 416 + L + + +AP A Q + A+ Sbjct: 360 RPQSDLTLEALAARIEVLEKALASGQFAAPAGTTPAAAAPVPASVPASQSGYAGQAVPAK 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 V ++A+++ A + Q RP+ + + +A Sbjct: 420 PARDEVPAPSRAQEAAARMRAARSQQAAPQPRPQAQPAPQAQPRPMAQPQAQPAPQAQAT 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 A P +Q + + +LAAKL A + W A V+++ + + Sbjct: 480 PQPAVQPQVQARPASQAQPRPQAPAAAAAPADLAAKLTNPAALQRGWQAAVAEVKRERSI 539 Query: 537 EQVAL---NAWKEESDNAVCLHLRSSQRHLNN----RGAQQKLAEALSMLKGSTVELTIV 589 L N E +A+ + S N + +A AL G V IV Sbjct: 540 YGALLMSANVVSEVDGSAMRIEFSSENTMAFNMVQKPDVTETIASALGHAFGMQVPFKIV 599 Query: 590 EDDNPAVRTPL 600 ++++ A P Sbjct: 600 QNESMAPVAPA 610 >UniRef50_A9BMI7 DNA polymerase III, subunits gamma and tau n=18 Tax=cellular organisms RepID=A9BMI7_DELAS Length = 731 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 247/732 (33%), Positives = 349/732 (47%), Gaps = 94/732 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP+ F+++VGQEHV+ AL N L+ R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYLVLARKYRPRNFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC+ GITATPCGVC C EI+ GRF D E+DAAS V++ + LL+ Y P Sbjct: 61 SLNCQGADGQGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQSLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 +GRFKV++IDEVHML+ +FNA+LKTLEEPPE++KF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 + + E + L +L +E +A EP+AL+LL+RAA GS+RDALSLTDQAIA G GQ+ Sbjct: 181 RPMAPETVLEHLGQVLGQEGVASEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEA 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V MLG++D L+EA+ +A+G+ V+ G+ + L EM +L R+A+ Sbjct: 241 TVRQMLGSVDRSHVFRLIEALAQADGQVVVETSEALRRNGLSAASTLEEMCAVLQRMAVA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q P + + LA +P + QL Y L GR EL APD + M LLR Sbjct: 301 QAVPQMAADASDPEAAEIARLAVLMPRDETQLLYSICLHGRAELGLAPDEYAALTMALLR 360 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA- 414 LAF P+ P P + + P+ + P Q A + Sbjct: 361 LLAFKPQSAEPAPGAAEKKTPALTPSTAKPESPAPVAQARPAQPAVPEAPAAPAKAAMPV 420 Query: 415 -------------------------------------------------ARQQLQRVQGA 425 L VQ A Sbjct: 421 PVAPPAPVAPVAPAASPVTAAPAVVAPVVQAVAAAAPVQAPVAVAAVARPEPVLAPVQEA 480 Query: 426 TKAKKSE----------PAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + E P PV++ + +S + QA+ + E A A Sbjct: 481 RPSAAPEVQPAARVAQGPLDEPVDEPVDDVQEDEDSSADEAPQAQDADAPDEGAWAGMPD 540 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPEL-------------------AAKLAAE 516 W ++ P A A + E + A Sbjct: 541 EGWADEGRWSDDGDLALEPPAAAVARQAEPQIDTQIDVQDFAPERGRHSPGAPPAPTVER 600 Query: 517 AIERDPWAAQVSQL----SLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQK 571 E D W A V QL ++ L Q+AL + +A L + SS L +++ Sbjct: 601 TPEGDVWHAAVQQLVQAEAVTALARQLALQSQLVARDGDAWTLRVESS--SLAQPATRER 658 Query: 572 LAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF 631 L AL G +L + + V +P E+ A + ++ + +QTL R Sbjct: 659 LRAALEAA-GLARQLHVEQGAV--VDSPARRNAVASHERQRIAEDIVMNHSLVQTLIRSH 715 Query: 632 DAELDEESIRPI 643 A++ SI+P+ Sbjct: 716 GAKIVPGSIKPV 727 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 137/374 (36%), Positives = 212/374 (56%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP++F +VVGQEH++ L N + L +I HAYLF+GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIVKTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I +D++EIDAAS V D R+L ++V YAP++ ++KV Sbjct: 62 NCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+P KLP TILSRC +F K + Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPDKLPDTILSRCQRFDFKRIPTRL 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I N+ I E + L+ +A GS+RDA+SL +Q + +G ++ + V MLG Sbjct: 182 IAQNLDRICNDSGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEGLITYEDVCEMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D+ SL++ M + + +++ + GI+ L + +L + + + L Sbjct: 242 VANDEVLFSLLDYMNAKDVAASLKQLDKILSYGIDVGNFLKSLTYILRDMVLYKTGGEEL 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 + + ++E + + + +KE+ YA +E+T+LR + Sbjct: 302 KEILYSDVETIKERVQNFGTAFLTNALEKFTNLQKEVRYAISPLTLLEVTILRLIKPEIS 361 Query: 363 MPLPEPEVPRQSFA 376 + + Sbjct: 362 YDMMSLLARVEQIE 375 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 162/638 (25%), Positives = 300/638 (47%), Gaps = 66/638 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ L R+WRP+ F D+VGQEHV+T L N +S RI HAYLFSG RG GKTS+A++ AK Sbjct: 1 MDYQALYRQWRPKYFRDLVGQEHVVTTLKNAISQSRISHAYLFSGPRGTGKTSVAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG C C E ++G F+D++EIDAAS +++ R++ D+V Y+P+ G + Sbjct: 61 ALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPP++V F+LATT+P KLP+T+LSRC +F L Sbjct: 121 KVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTEPHKLPMTVLSRCQRFDFYRLST 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--GDGQVSTQAVS 238 +I QL+++++ ++++ +L ++A+ ++G +RDALSL DQ+++ Q+ V Sbjct: 181 SKIEKQLQNVIDSKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGSGEQLKVDHVL 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 + GT+ +D L+ A+ E + +++ ++ + + G ++ L +++ L + + +L Sbjct: 241 EVTGTVSEDTFYDLLMALKEGDLAQILNIVQQLSDSGKDFGQFLNDLIVYLRDLLLFKLK 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + ++ +++L + ++ L ++ + ++ +RR+ VEM R + Sbjct: 301 GPSDQLLWGSV-DSVKKLHKYFTKDELISMIDFLSEKQQAMKWSQNRRLIVEMAFYRIIN 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + E + + QQ ++ E+ ++ A Q Sbjct: 360 KYNTSFEAEYKE---------KETKQKNNEETNDKSLKVQQTTSIESVESENKENAKLQD 410 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + T + ++ +++ ++ +++ + D++ + + K +W Sbjct: 411 QSSLPKQTDDQSNKNNDSSKLS-REDSDIQQSETKKDKMTEQQEATVQNDLNLKIVTEQW 469 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 A + LK+ K Sbjct: 470 DAVL------------EKLKQRKVTAHALVFEGKPVD----------------------- 494 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQK----LAEALSMLKGSTVELTIVEDDNP 594 +N + L + + L+ +QK L E LS G +++ + + Sbjct: 495 --------VKENTLYLGFKKLHK-LHKERVEQKEKGLLEEVLSEFFG-DIKVKCIIVE-- 542 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 T L + ++ D+ ++ F Sbjct: 543 --ETDLSKQNTKQGNDHKGNSQNEEMDDLTGIAKQKFG 578 >UniRef50_A7NLI5 DNA polymerase III, subunits gamma and tau n=2 Tax=Roseiflexus RepID=A7NLI5_ROSCS Length = 644 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 196/649 (30%), Positives = 303/649 (46%), Gaps = 25/649 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L R++R QTF +++GQEHV+ L N ++ GR+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MTVQALYRRYRSQTFDELIGQEHVVRTLRNAIAEGRVAHAYLFTGPRGVGKTTVARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PCGVC++CR I +GR VD+IE+DAAS T VED R++++ VQ+ PA R Sbjct: 61 AVNCTAPPAERPCGVCESCRSIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPAVART 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+ K+P TILSRC +F V Sbjct: 121 KVYIIDEVHMLSTAAFNALLKTLEEPPPHALFILATTEVHKVPATILSRCQRFVFNRHTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I +E + EP A + +ARAA GS+RDALS+ DQ +A G G VS + V + Sbjct: 181 ASIAAHLRMIATQEGVTLEPGAAEAIARAATGSMRDALSVLDQLMAYGGGTVSLEQVRNL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + +LV+A++ A+ + ++ + AA G + +++ L + ++ Sbjct: 241 LGASEMQEVTTLVDALIAADLPGALRVVADVAAAGADLRQFTRDLVERLRALMLICAGAD 300 Query: 301 ALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D+A E ++ ART+ D+ + + +L + ++ +E+ ++ A+ Sbjct: 301 RSLLDVAEEEAAQIERQARTVSLGDLMRWVKLFSELDYQLRISSYGQLPLELAVIEAVIA 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + P + QPQ AP Q T P + T + Sbjct: 361 SAPAATAAQSTVPATPPRPSARPTTAPARDAAQPQRAPAQPTTAPAHDRTPPQPPPARAA 420 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + P A R + A A +AP +A + Sbjct: 421 PAHNAEPPQRDLAPPATVPVRDDMPPVPTIRRAGATGTAAASPVDAAREAPG--DAPQAS 478 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPEL-------AAKLAAEAIERDPWAAQVSQLSL 532 A P + + ++A + E A A W+A V + + Sbjct: 479 ARQPDSTGDPFIRHQEQTRRASNPGISTESGEGVAAANADAVALERIEGIWSAVVRDVRV 538 Query: 533 PKLVEQVALNA---WKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELT 587 Q LN+ + DN + L + S + +Q + E LS G+ + Sbjct: 539 HNKTLQALLNSGARPVDVKDNILVLEVPSEWLMNQIEKPAMRQIVEEVLSKHMGARFAIR 598 Query: 588 IVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + P R+ I + D ++ FDA++ Sbjct: 599 CAV-ETQRRENPGALREQIRASR---------KDPLVRAALNIFDADII 637 >UniRef50_Q13Z80 DNA-directed DNA polymerase n=48 Tax=Burkholderiales RepID=Q13Z80_BURXL Length = 957 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 216/504 (42%), Positives = 291/504 (57%), Gaps = 3/504 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+TPCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LEHIL EE + ++ +AL+LLARAA+GS+RDALSLTDQAIA QV+ +AV M Sbjct: 181 GHIVSHLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ + +G V+++ +E A R + + L ++ LLHRIA Q +P+ Sbjct: 241 LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + +QL+YQ IGR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEAGD-LRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFE 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P V + T P V + A Sbjct: 360 PAPTGGGGAVGAARAPGQSGAGGARRTGAPAVAAQQGASGSPVSQARAVAASGAVPGTSF 419 Query: 421 RVQ--GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 Q A ++++P A + T V + A +A Sbjct: 420 EAQVSAAAPGRETQPGNVVVADKGAVVGAVSVEPATRAVAQAGSTVEVPPAVGDVQAAAA 479 Query: 479 KATTPVMQQKEVVATPKALKKALE 502 + + + A P + Sbjct: 480 DSAQGAVAGQSPAAEPATVAGPAP 503 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 5/141 (3%) Query: 504 EKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRH 562 ++ P A + W A L L + Q+A N+ N + L++ Q Sbjct: 808 DQRPLPPAVPLDPLGFKGDWPALAVDLPLKGISYQLAFNSELMALEGNTLKLNVPVPQ-- 865 Query: 563 LNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADN 622 KL AL+ G TVE+ + PA RT A+ ++ +A I AD Sbjct: 866 YAEASQVAKLKTALADRLGHTVEVLVEVG--PARRTAAAHDAAMRAQRQQEAEREIGADP 923 Query: 623 NIQTLRRFFDAELDEESIRPI 643 +Q+L R F A + SIRPI Sbjct: 924 FVQSLIREFGASIVPGSIRPI 944 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 156/591 (26%), Positives = 282/591 (47%), Gaps = 25/591 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ F D+VGQE V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MSYQALYRVWRPQRFMDLVGQEMVTKTLKNAIITHQTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I +GR D+IEIDAAS VE+ RD+ D V+YAP + Sbjct: 61 AINCRFSKEGEPCNECETCKAITEGRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTEADY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TI+SR +F K + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTEPHKIPATIISRTQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I ++ +IL+++++ ++ +AL+++A+AAEG +RDALSL DQ I+ GD V+ + Sbjct: 181 ESILQRMIYILDQKNVDYDDKALKVIAKAAEGGMRDALSLLDQVISFGDNNVTLDNALLV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++ + + ++ ++ + + I + +G + L+ +++ + + Q +P Sbjct: 241 TGSVTQESLFNYLKFVLSKDTTNALKEIQQIVEQGKDANRLIEDLINYCRDLLLYQQAPE 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + ++ ++ + +EL++ I T + L ++ + ++ + + +E+ ++ Sbjct: 301 MVSDGELGLLDDKFKELSQQINVTQLYQIIDELNKQQENMRFSSHQSIYLEVLTVKL--- 357 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + ++ + + + S ++ Sbjct: 358 -------------TQLSTNSEADRVSNVDLSQIELLKQKIENLQRKVDNLSSNTVQTEKN 404 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + + ++ + ++ A+ + + V L + + Sbjct: 405 NEPRKQVRKNTTKGQKNVKINLSQVYSVLNNATRQSLNELKQVWPDLMNMLSVTQRAIMH 464 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE-- 537 + PV + V + A +K E + D +V L L + Sbjct: 465 VSEPVAASENGVVV--GFEYAFLCQKALEDQELIDTLENGLDRLIGKVPSLVLIPVENWP 522 Query: 538 QVALNAWKEESDNAVCLHLRSSQRHLNNRGA----QQKLAEALSMLKGSTV 584 ++ N K+ + AV + +S++ +N Q + + L G+ + Sbjct: 523 EIRSNYLKQRKNGAVVIADDTSEQSQDNDDQSASTQPTIIQKAEELFGTDI 573 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 127/377 (33%), Positives = 226/377 (59%), Gaps = 2/377 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 ++ L R +RPQ F DV+GQ+H++ L N + I HAYLF GTRG GKTS A++ ++ + Sbjct: 2 HKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC I PC C+ C + + +D++EIDAAS V+D R+L ++V+Y+PA ++KV Sbjct: 62 NCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS+ +FNALLKTLEEPP +V F+LATT+P K+P TILSRC ++ K + V+ Sbjct: 122 YIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVKD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + +++ I +E I + +AL L+AR ++G+LRDALS+ DQ ++ G+ ++ + V ++G Sbjct: 182 MTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELMG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP--A 300 +++ +Q L + +VE + ++ + ++NE G + L+ +++ + + ++S Sbjct: 242 SVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSELD 301 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + +++ ++ I D+ L I + ++ + + R+ VE+T+++ Sbjct: 302 EIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQPM 361 Query: 361 PRMPLPEPEVPRQSFAP 377 ++ Sbjct: 362 FDESKEALIKRVENLEK 378 >UniRef50_Q6ABA1 DNA polymerase III subunit gamma n=4 Tax=Propionibacterium acnes RepID=Q6ABA1_PROAC Length = 957 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 171/649 (26%), Positives = 278/649 (42%), Gaps = 37/649 (5%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L R++RP+TF +V+G++HV+ L + R++HAYLFSG RG GKT+ AR+LA+ LN Sbjct: 108 LALYRRYRPETFDEVIGEDHVIEPLKRAILNNRVNHAYLFSGPRGCGKTTTARILARALN 167 Query: 64 CETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 CE G T TPCG C +CR++ G +D+IEIDAAS V+D RDL + +AP R+K Sbjct: 168 CEQGPTPTPCGTCQSCRDLACGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVHSRYK 227 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDE HM++ FNALLK +EEPP HVKF+ ATT+P+K+ TI SR + + + + Sbjct: 228 IYIIDEAHMVTPQGFNALLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPK 287 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI-ASGDGQVSTQAVSAM 240 + L + +E I + L L+ RA GS+RD+LS+ DQ + + DG VS + +A+ Sbjct: 288 VLVEYLAELCGKEGIDVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAADGHVSYEQAAAL 347 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +V+A + +V A I++ G + ++L + + +V P Sbjct: 348 LGYTPEALLDEIVDAFAAGDAHQVFATIDKVIEVGQDPRRFAEDLLRRMRDLVIVSAVPD 407 Query: 301 A----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 A L + R+ ++ + L G + R+ +E+ R Sbjct: 408 ACRSGLIDVSPEQATRLAHQVSGFGAGELTRAAEVLATGLTNMRGTTAPRLHLELMCSRI 467 Query: 357 L----------------AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA 400 L R+ + P + T PQ S PQ Sbjct: 468 LLPGADTDGRGIHARLERLERRIGVSGPVEEVERAERPVTAQPPTRYADTPQQASPPQHW 527 Query: 401 PTVPL--PETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQ 458 P L PE S + + + + S RP N A + ++ Sbjct: 528 PAENLQNPERRSAPEHHDAPSPGQRPSGRPRPSRK----DYRPGNQLAEQPPSNQHGDDG 583 Query: 459 ARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAI 518 + P+ + + + Q++ TP A + E+ + + Sbjct: 584 QMSQGPRQQGGPSTSQRQQPRPQDHQPSQRDRQDTPPAQPQQPSAEQGGRADDAINITTL 643 Query: 519 ERDPWAAQVSQLSLPKLVEQVALN---AWKEESDNAVCLHLRS--SQRHLNNRGAQQKLA 573 R+ W + + V + LN E N L + ++ + + L Sbjct: 644 RRE-WPQVLEAVKDGGRVAWMVLNQYAQVLEVHGNQATLGFSNIGARENFAAGNYPKVLH 702 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADN 622 +A+ + G + T V + PA P A+E D Sbjct: 703 DAVVKVLGVDLAFTAVVGEPPAAVRPESHPAEFQSGP--AAQEPPDDDP 749 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 169/551 (30%), Positives = 259/551 (47%), Gaps = 12/551 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R +RPQTF DVVGQEHV T L N L R+ HAYLF+G RG GKTS A+++AK Sbjct: 1 MAYTALYRVYRPQTFQDVVGQEHVTTTLRNALRENRLSHAYLFNGPRGTGKTSAAKIMAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC CD CR I G D++EIDAAS VE+ RD+ D V++AP+ R+ Sbjct: 61 AVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEIDAASNRGVEEIRDIRDKVKFAPSDVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPSHVIFILATTEPHKLPATIISRCQRFDFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+ I + + E +ALQL+A+ AEG RDALSL DQAI+ +V + + Sbjct: 181 RVMVDLLQRICQSQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSKDEVRASDIMQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 GT+ L + E + +VM ++ +G + E L + L + +++ +P Sbjct: 241 TGTVAQSYFSVLARHIAENDIAQVMEQFDKVMVQGKDPEQFLHDFLYYYRDMLLLKTAPQ 300 Query: 301 ALGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 I+ + E+A+ + +T +L ++ R+ VE+TL++ Sbjct: 301 LEEIVERTMIDDQFAEVAKLYSFPVLYAAIETCNQALSQLKWSTYARVLVELTLVKMC-- 358 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P E + + + Q + P + + + + Sbjct: 359 QPNANATESMGASPVNSEELTAMSNRIRVLEERLVQVMQGQVSTPGQQKAEETRKSEPRR 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 A++ + R Q + + L+K + +A+ Sbjct: 419 IAAASGGSRTP------MNRVREVAKAMDENLTRQVRGQWSQILTELKKIKIQYQAWLVN 472 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 PV E V A+ +KT E + E + + LS+ + Q Sbjct: 473 G-QPVAAGNEAVVV--TFNSAIHCDKTMEAELRSVIERVMSTVLGRPLQLLSVMEEEWQS 529 Query: 540 ALNAWKEESDN 550 ++ + Sbjct: 530 VDQQVGQKDAS 540 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 166/588 (28%), Positives = 260/588 (44%), Gaps = 5/588 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L R WRPQTF D+VGQ H++ L N + R+ HAYLF+G RG GKT+ A++LAK Sbjct: 1 MSHIALYRAWRPQTFQDMVGQRHIIQTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G PC CD CR I G +D+IEIDAAS +++ RD+ D V+YAP+ R+ Sbjct: 61 AVNCERGPAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSEVRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P KLP TI+SRC +F + + + Sbjct: 121 KVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTEPHKLPATIISRCQRFDFRQVSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+ +L I +E I E A+ +AR +EG +RDA+SL +Q A G +++ + Sbjct: 181 EEQSERLFEICRDEGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAFGGSRITLDGAVDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + DQ +L EA+ + N +M L+ G + + ++ + +++L+P Sbjct: 241 TGGMAADQFYALAEAIRDRNVAAIMPLVEGLTQAGKSADKCMENLIFYFRDLLVLKLAPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + R R +A + TL + ++ +A + E+ L++ Sbjct: 301 GAVTERVVDAERFRGMADAFSSERLFKMIDTLNTYQSDMKHASQPQTLFEVALMKICTIG 360 Query: 361 PR-MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + +P A +A + + + + S Sbjct: 361 NESAGGTGSGGGAATSSPPAASAEVQRLRQQVEILERKLEQLIQNGGAAGSGAGDGGAVR 420 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 Q + + AA V A Q R + + + Sbjct: 421 QPASQSRRPGFGGGGAAVSRSTVKLDPFVAAAGSPGTGQVRMKWNEVLHRVKEARITVHA 480 Query: 480 ATTP-VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 A K + E T A + E + +D + + Q Sbjct: 481 WLVDGEPVAATDSTILVAFKNTMHRETTERPAHREIIERVMQDVFGNPFKLATCMLKEWQ 540 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 A + E+ + L Q + EA+ L G + + Sbjct: 541 NAASRSGEQEGETLELQ--PDAIDTGEEQRPQWVEEAVK-LFGEDLVV 585 >UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 Tax=Sphingobacteriales RepID=C6W6R9_DYAFD Length = 621 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 160/647 (24%), Positives = 259/647 (40%), Gaps = 38/647 (5%) Query: 1 MSY-QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 M + V ARK+RP TF VVGQ H+ T L N + + A+LF G RGVGKT+ AR+LA Sbjct: 1 MDHFVVSARKYRPVTFDSVVGQSHITTTLKNAIRTNHLAQAFLFCGPRGVGKTTCARILA 60 Query: 60 KGLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC+ G CG C++C + ++ E+DAAS VED R+L+D V+Y P G Sbjct: 61 KTINCQNLGDDVEACGECESCVSFQNNASFNIHELDAASNNSVEDIRNLIDQVRYPPQTG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++K+Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + Sbjct: 121 KYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTD-QAIASGDGQVSTQAV 237 + I H L I +E I E AL+L+ + A+G LRDALS+ D S + ++ AV Sbjct: 181 QSKDIAHHLLDIAKKEGINAEHEALELIGQKADGGLRDALSMFDLNVTFSTNNHLTYAAV 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 L LD D + +A+ + R + L +E +G + +V +L + + + Sbjct: 241 LENLHILDYDYYFKITDALTAGSIARSLVLFDEILRKGFDGHLFVVGLLEHFRNLLVCKD 300 Query: 298 SPA-ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 L + E + E + + + A ++R+ VE+ L++ Sbjct: 301 PATVTLLQVSESAERKYLEQSLMADMSFLLSALSITGQCDINYKSAKNQRLHVELCLMKL 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + L ++ P APQ + V + A Sbjct: 361 ANLPQVLQLHSLAAVDETAKKKVEPQQSLNNG----PAPAPQPSAVVNGQPSNGSAYAQA 416 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 Q + P A + + + + +P S L+ + + Sbjct: 417 PAPQ----PAMPQHPSPQQAMHQQTAPQQVMPQQTAPQQVTPQQPASSRLKNTISLTPSL 472 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK-- 534 P A + + + W + Sbjct: 473 TPPTQQ-------AAKEPAAQPRVEYAAVPNGTKKEELTLPNLQRLWYEFSQKRQQAGNS 525 Query: 535 LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 EQ+ LN + + + + L + + + L L + +L I P Sbjct: 526 TTEQITLNREFQLNGTTIEIALDNDHQQDAVMNMRYDLLGFLKSRLDAP-KLDINPRVAP 584 Query: 595 A-----VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 TP E + + + L++ ++D Sbjct: 585 QEVNRLPYTPAEKFNYMA-----------EKNPYLLELKQALGLDVD 620 >UniRef50_C4G1W4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1W4_ABIDE Length = 522 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 137/388 (35%), Positives = 224/388 (57%), Gaps = 3/388 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP+ F +V GQ+ V+T L N + +I HAY+FSGTRG GKTS+A++ AK Sbjct: 1 MSYTALYRKFRPKGFDEVKGQDSVVTVLKNQIKHEKIGHAYMFSGTRGTGKTSVAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE +PCGVC+ C++I +GR +D+IEIDAA+ V++ R++++ V+Y+P ++ Sbjct: 61 AVNCENTKDGSPCGVCETCKKIGEGRTLDVIEIDAATNNGVDNMREVIEEVKYSPTDTKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPE+ F+LATT+P K+ TI SRC ++ + + + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPEYAIFILATTEPHKVLPTIKSRCQKYDFRRISI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 E I +L+ ++++E +E AL+ +AR +GS+RDALSL DQ +A D +++ V Sbjct: 181 ETISDRLKELMDKEGNTYEEEALKFIARKGDGSMRDALSLLDQCLAFSFDEKLTYDKVLN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG++D D L A+ + M + E + GI+ ++ + ++++S Sbjct: 241 VLGSVDTDLFNKLYIAIKRGDVTTCMDIAEEISMNGIDIGQFTLDFTWYFRNLLLLRVSK 300 Query: 300 AALG--NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 AA ++E+A+ D+ Y + ++ Y+ +R +E+ L++ Sbjct: 301 AAADRIEISTDKLAELKEVAKIGEENDLYRYIRIFSKLSADIKYSTSKRAELEIALIKLC 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMT 385 + + T Sbjct: 361 RPEMEEDRESLIARINKLEEIIESGEFT 388 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 150/477 (31%), Positives = 240/477 (50%), Gaps = 8/477 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQVFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC CD C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I++ E + + +L+++A AA+G +RDALSL DQAI+ Q++ + Sbjct: 181 KDIVGRMQKIVDAESLNVQEGSLEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L EA+ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQQFISQLAEAIFDQNIAVALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPD 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + ++ L+ + P + + L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDENFVTLSDRVTPQFLYETIEVLNKSHQEMKWTNHPRIFFEVAVVKLCQA 360 Query: 360 HPRMPLPEPEVPRQSFAP-----VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV-- 412 +P + + + VP PQ+ P P+T+++ Sbjct: 361 TAGIPQAHANADLTTLTDKIDRLEQELSRIKAEGVPMSHSQHPQEKKEAPRPQTSNKNGY 420 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 A ++ + K + E + + + S + +A A Sbjct: 421 RAPVGRIHEILKEAKRPELEKIKGKWGELLAHLKQQNKVSHAALLTDSEPVAAATHA 477 >UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunits n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455DA Length = 676 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 177/668 (26%), Positives = 282/668 (42%), Gaps = 40/668 (5%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SYQV ARK+RP+TF DV+GQ+HV+ L N ++ R+ HAYLF G RG GKTS AR+ AK Sbjct: 16 SYQVFARKYRPRTFEDVLGQDHVVRTLRNAIAQNRLAHAYLFVGPRGTGKTSTARIFAKA 75 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC G + C EIE+G +D+ EID AS VE R+L + V++AP R R+K Sbjct: 76 LNCPNGPRVDFDPDDEVCVEIEKGISLDVREIDGASNNGVEQVRELREEVKFAPTRCRYK 135 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y IDEVHMLS +FNALLKTLEEPPEHVKF+ ATT+ K+ TI+SRC +F L+ + Sbjct: 136 IYYIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEAHKVLPTIISRCQRFDLRRIPAG 195 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I L HI E +A +A +A+ AEG +RDA S+ DQ +A ++ Q V + Sbjct: 196 LIAKHLLHIATLEKVALSEKAAYAIAKGAEGGMRDAQSMLDQLVAFCGERIEEQDVLDIF 255 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + +L +++ + + ++ A G + LL +++ + + Q+ PAA Sbjct: 256 GFTRGETVANLAARVLDRDTVGALKELHSQADTGKDLGRLLTDLIQHFRTLLVHQVDPAA 315 Query: 302 LGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 D+ + +R+ + + + L + +A ++ + +E+ +++A+ Sbjct: 316 AEEDLSPEVADMVRQQSAMVQAESLLRVMDGLAEVDARMRWASNKLLHLEIGVIQAVQTL 375 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + L E ++ ++ PP P A +AP P +AA Sbjct: 376 GEVTLSEVI---EALGGAPSPDLIARRAAPPVPSRAVVEAPAAERPRPAPVAVAAPTPAP 432 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + K A P+ E PA Sbjct: 433 V---SLSTPKPAAAPVVEPAPLPALFREEPPPQAPVPPLFRDEPPQTDRPAPVAVAPTPP 489 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ-- 538 V + P A A + AA + W + + ++ Sbjct: 490 PVAVPAEVPPAVEPAAPTPAPAPVAEAPTSPPAAAGGTPEEQWRQIKDRFRIKSPLKADY 549 Query: 539 VALNAWKEESDNAVCLHLRSSQR----HLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 + + A++ + + + +S+ L ++ L E +S + G + L I +P Sbjct: 550 LDVAAFQSCEGKTLRIGMPTSEAGHRDALLYAPVRKALEEIMSDVIGRPMMLEINL--DP 607 Query: 595 AVRTPLEWRQAIY-------------------------EEKLAQARESIIADNNIQTLRR 629 ++ P E E D IQ Sbjct: 608 SMEPPPMAEPMFTFSDPEPAPAKAPAAPKPEPKAEAKSEAAKPAINEDFYNDPLIQEALV 667 Query: 630 FFDAELDE 637 F A L + Sbjct: 668 KFKATLVK 675 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 148/432 (34%), Positives = 232/432 (53%), Gaps = 4/432 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A++ AK Sbjct: 1 MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I ++ I++ E + E +L+++A AA+G +RDALSL DQAI+ + + + Sbjct: 181 QAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L +++ + N + +NE +G + L+ +M+ + + + +P Sbjct: 241 TGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPG 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA- 358 + ++ REL+ IP + L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT 360 Query: 359 -FHPRMPLPEPEVPRQSFAP-VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 LPE ++ + + T + +S ++AP VP ++ Sbjct: 361 SHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESPKKEAPRVPKGGKSNYKAPVG 420 Query: 417 QQLQRVQGATKA 428 + + ++ AT+ Sbjct: 421 RIHEILKEATRP 432 >UniRef50_A3ZPF5 DNA polymerase III gamma and tau subunits n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZPF5_9PLAN Length = 618 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 185/649 (28%), Positives = 295/649 (45%), Gaps = 63/649 (9%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V+AR++RPQ+F ++VGQ V AL N + GR+ HAYLF+G RGVGKTS AR+LAK L Sbjct: 18 YVVVARRYRPQSFEELVGQSQVAQALKNAIERGRVGHAYLFTGARGVGKTSSARILAKAL 77 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ G +ATPC CD CR + G VD++EID AS +E+ R L NV P+R RFK+ Sbjct: 78 NCQRGPSATPCNECDICRSVTVGEDVDVLEIDGASNRGIEEIRQLRSNVNIRPSRARFKI 137 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHM ++ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F + +++ Sbjct: 138 YIIDEVHMFTKEAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFGGIRMDE 197 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L +I+ E + EP AL+LLAR A GS+RD+ SL +Q +A G +++ V+ MLG Sbjct: 198 IVTRLAYIVENEGVTAEPEALRLLARKANGSMRDSQSLLEQLLAFGGREITVADVNQMLG 257 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ--LSPA 300 +Q ++ A+ + V+A ++A RGI+ L+ ++LG + + P Sbjct: 258 AAGSEQIAVIMTALAARDAAAVLAYFDQALTRGIDPGQLIEQLLGFFRDMMTLAVGAGPT 317 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L + ++ +A++ ++ Q L + + R+ EM L+R Sbjct: 318 LLQTVLPTDAEKIEAVAKSYGLANVMAAVQILDDALVRMQRSAHARILAEMALVRVCQLE 377 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + + +S P+ + P + P +T Q A ++ + Sbjct: 378 DLQSVADLVETIRSGKPLPARPAIQIAAAPQPSAAPQLPPQAAPQAMSTVQTDVAAERTE 437 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 ++ S P V + E + E R Sbjct: 438 SRVNSSDPASSGPVRQASPSEVTSYVEEPDPEL-----------------GLSEPPRTNG 480 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 ++ ++ W ++ +S LV + A Sbjct: 481 I-------------------------------KLTDSTAKNIWEGILTDMSD--LVGEYA 507 Query: 541 L--NAWKEESDNAVCLHLRSSQ----RHLNNRGAQQKLAEALSMLKGSTVELTIVE-DDN 593 N + + ++ L A+ +L L+ G+ V L +D Sbjct: 508 RPYKTVATSGPNRLVVSFSAAYNSQVEFLRRPAAKTRLEGMLTEAVGNPVTLEFKVLNDV 567 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 PA +T + Q + + +Q F AE+ S+R Sbjct: 568 PAAKT--QEPPKRSAPSSGQMIRKVQQNQLVQQAIEMFGAEV--TSVRA 612 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 178/653 (27%), Positives = 273/653 (41%), Gaps = 88/653 (13%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+VLA K+RPQTF +VVGQ HV T L N + GR+ HA L +G RG GKT+IAR+LAK Sbjct: 1 MSYRVLALKYRPQTFDEVVGQPHVTTTLKNAILSGRVPHAILLTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCETG T TPC +C C I G VD+ EID AS V+ R+L +NV Y P+ +F Sbjct: 61 AMNCETGPTPTPCNICKTCTNITAGSAVDVFEIDGASNNSVDQVRELRENVAYMPSSSKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP+HV F+ ATT+ K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTEVHKIPVTILSRCQRHDLGRISL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI---------ASGDGQ 231 QI L + E + + LLA A+GS+RD+LSL D+ + SG Sbjct: 181 AQISAHLMTLAAAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQAQTSEQTSGPRA 240 Query: 232 VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHR 291 + + LG +D L +A+++ G ++ L++ G++ + ++ Sbjct: 241 IDDDKILGTLGIIDKTLVFDLADAIIQNRGADIIDLVDRIHTLGLDLKRFYASLIRHFRN 300 Query: 292 IAMVQLSPAALG--NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGV 349 +A+V++S + RM L + + + TLL+ + + R V Sbjct: 301 LAVVKVSSNDKNTCDISDHDRQRMAALTAPLSQSFLNQILNTLLVDESLVKLSSHTRTAV 360 Query: 350 EMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 EM LL+ + P + + A P ++ P P PE Sbjct: 361 EMVLLKLVQIRPGIEIDLMIKRLDDLARRFDN--------PDFQALPQEERPVCPPPEPR 412 Query: 410 SQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + +P +P + V + P P A Sbjct: 413 KAPTSMDPHPISDDNGESVPAPQPGTTPSYKPTD----------RINVVSPPTPEPRTIA 462 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 P + A RW + A+ K L+ ++ +L A +R Sbjct: 463 PPEDPAGRWNPFLKALADSLPFASAILSKGRLQKISNTDIVVELNGTAFDRGRI------ 516 Query: 530 LSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIV 589 + ++ G + LT++ Sbjct: 517 ------------------------------------ESKRGEIETVCHDYFGKPLHLTLI 540 Query: 590 EDDNP-----AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 D P ++P + RQ I+ + + F+ + + Sbjct: 541 GDCAPKEYGNDEKSPAKLRQE------------ILNHPLVADAIKRFNGTVVD 581 >UniRef50_A6VYC4 DNA polymerase III, subunits gamma and tau n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VYC4_MARMS Length = 752 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 236/523 (45%), Positives = 318/523 (60%), Gaps = 6/523 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQTF ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE GI+ PCG CD+CREI +GRFVDLIE+DAASRTKVEDTR+LL+NVQYAP RGR Sbjct: 61 CLNCETNGISPEPCGTCDSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ L+ +L E + + AL + +AA GS+RDALSLTDQAIA G+G +S V+A Sbjct: 181 PQRVVDYLQTVLTTEEVNFDQPALWQIGQAANGSMRDALSLTDQAIAFGNGTISESGVTA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q L L+E++ N +V+ I + A ++ A+ +L +LHR+A+ Q P Sbjct: 241 MLGLVNQAQVLDLLESVASKNAAQVLTRIEQLADYQPDFTAICGSLLDVLHRVAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + R++ +A ++ +IQ+ YQ+LLIGR++L A R G EM +LR +AF Sbjct: 301 GALMDQLGD-LARIQAIAASVSSEEIQIMYQSLLIGRRDLHLAHSARAGFEMLMLRLIAF 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P+ V AV + Q+A + P P+ E + V+ +++ Sbjct: 360 RPAPPMV-VSHNAPPVMNVQTEAVPITSPDESMHQTAESEYPLQPMTEKKTPVV-KQEEP 417 Query: 420 QRVQGATKAKKSEPAA--ATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 ++ A + + EP A P + E + A+E A+ E + Sbjct: 418 VVIKPAEQMVEPEPVQESAQPTAPAEHPPWEYAPEPAAAEEYVVEQVAVESESAQSEVIQ 477 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER 520 V + + + + L E+ + Sbjct: 478 HDIEEDVEITAVENSELEESLDVEQQTVSIALEPTARQESDIQ 520 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 96/329 (29%), Gaps = 47/329 (14%) Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P + EPE ++S P AP P + V + ++Q + + Sbjct: 421 KPAEQMVEPEPVQESAQPTAPAEHPPWEYAPEPAAAEEYVVEQVAVESESAQSEVIQHDI 480 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP--------- 470 + T + SE + + + + + E P Sbjct: 481 EEDVEITAVENSELEESLDVEQQTVSIALEPTARQESDIQVETANKPEHEPKSFVVADDR 540 Query: 471 -------------------AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAA 511 + A P + + +E P+ Sbjct: 541 FTEELLDESDEDEDEQEAEERAIADIVDPFNPAADLVDALGAEPIESSVVEESTEPDTRL 600 Query: 512 KLAAEAIER------------------DPWAAQVSQLSLPKLVEQVALNA-WKEESDNAV 552 + I + W +L L LV+ + +N+ + SD V Sbjct: 601 SKVPDTIAQPALGMPLPEMSHFNELTMKLWWLVAPRLPLTGLVQNILMNSSLVDASDQGV 660 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 L + H+ N+ +++ ALS TV L I ++ T E+ + E L Sbjct: 661 RLEVPLEYGHMLNQVRYEQIQGALSDFFAMTVPLIIDTVEDTTGVTAEEFAASKRAEALQ 720 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIR 641 A + + +Q L A+L ++++ Sbjct: 721 VAITHLNSHPVVQALSATMGAQLVYDTVK 749 >UniRef50_B4S8V3 DNA polymerase III, subunits gamma and tau n=11 Tax=Chlorobiaceae RepID=B4S8V3_PROA2 Length = 617 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 176/656 (26%), Positives = 286/656 (43%), Gaps = 60/656 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQV+ARK+RP FAD+ QEH+ + N L L R+ H Y+FSG RGVGKT+ AR+ AK Sbjct: 1 MSYQVIARKYRPSKFADITAQEHITHTIQNALRLDRVGHGYIFSGLRGVGKTTAARVFAK 60 Query: 61 GLNCETGITA--------TPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQ 112 +NC+ I PCG C++C + + G +++ E DAAS V+D R L +NV+ Sbjct: 61 AVNCQKMIDDPVYRQEVTEPCGECESCLDFDAGTSLNISEFDAASNNSVDDIRQLRENVR 120 Query: 113 YAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ 172 Y P +GR++VY+IDEVHMLS +FNA LKTLEEPP H F+ ATT+ K+P TI SRC + Sbjct: 121 YGPQKGRYRVYIIDEVHMLSTAAFNAFLKTLEEPPSHAIFIFATTELHKIPATISSRCQR 180 Query: 173 FHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ- 231 F+ K + + +I+ QL+ I E + AL L+AR A+GS+RDA S+ DQ IA G Sbjct: 181 FNFKRIPIGEIQSQLQMICRAETLQISDDALLLIARKAQGSMRDAQSILDQVIAFSVGND 240 Query: 232 ----VSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLG 287 ++ Q V+ +L +DDDQ + +A+ E + +++ + G + + L +++ Sbjct: 241 AEKVIAYQGVAELLNYIDDDQFFDVSDAVAENDPVKMLQVARFVIDNGYDEQDFLEKLIE 300 Query: 288 LLHR-IAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR 346 + + L L +++ R ++ A + + L+ EL + + + Sbjct: 301 HFRNFLVLYNLRSTRLIERTESVKERYQQSAGGLSAPLVMQLIDLLMKESGELKFQFEYQ 360 Query: 347 MGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP 406 E+TLLR + V V P P P Sbjct: 361 FRFELTLLRLIEL-----------------------VHNDGGVAASVAGGPPVKKKAPEP 397 Query: 407 ETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSAL 466 + + GA A+ PA+ +P + R AS+ Q + Sbjct: 398 DLKQPDRHPGPAGRSAPGARPAELPSPASTPEQQPPS----ARSASLPPSPQQSAPRNVA 453 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 P + W+ + P + + + + R W Sbjct: 454 SGKPGVDFS-AWQGKLMNFTRNGSRKQPVQASSSDARQSG--VFEGVVEVEKFRMEWNQF 510 Query: 527 VSQLSLPKLVEQVALN----AWKEESDNAVCLHL--RSSQRHLNNRGAQQKLAEALSMLK 580 + + L K + + + S + + + S L A L++ + Sbjct: 511 LE-MLLKKRQKVLVTHLRSCELTSCSHGVLVMTCGKKFSYEELMQDAAL--LSKEIESFY 567 Query: 581 GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 G V+L I D +T + R+ ++ ++ + + F EL Sbjct: 568 GIAVKLQICYDAARDAQT-------REQTIFTLFRDLAETNDVMKYIIKEFGGELV 616 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 250/526 (47%), Positives = 324/526 (61%), Gaps = 9/526 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGR+ Sbjct: 61 GLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L E + E AL LLA+AA GS+RDALSLTDQAIA G GQV + V M Sbjct: 181 DEISDQLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ Q ++L+EA+ +A+ +M + + G E E +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A M+ +++ A+ + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+ F Sbjct: 301 AAQ--MSLYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVTFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ + + + A TQ + A + +V AA + Sbjct: 359 PEQPVSKWVTDSPAAIAIPQAAAPAITQS-------SESAKPQAIVAPQQEVKAAPVEEA 411 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + S PV L+ + + PV S LE ++ +A Sbjct: 412 AEKKTVLTANSVNDKQPNQDPVAADTLKPELAAIEASVGAPVSSTLESMNSEMAVILSQA 471 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 + + T + + E P + A+ A+ D Sbjct: 472 QSQGFSSSDTSETKDISTEQTQSEVKPPVKAQQPADTSTSDDATEI 517 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 100/282 (35%), Gaps = 3/282 (1%) Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET-TSQVLAARQQLQ 420 L + P V + AP PE S + Sbjct: 637 DAVLAARDSLLDGIGEEDPQESSAKKSVAERKPFAPPVRKPKAEPEIDNSDPATVGAKSD 696 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVT--DRVQARPVPSALEKAPAKKEAYRW 478 + Q KA ++ T RP + + D + A + A + + Sbjct: 697 QAQENIKAANADNQEETFDRPPWEEPHAQDPTPRFDDVAVEKEANKAADNAAVEPKRTPQ 756 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 Q K V + + P L + W ++ L + V Q Sbjct: 757 PQNQTEQQSKPPVTSLDSTSVQDVELNLPALPSGEITGNDIDLKWYRFMADLEVGGRVRQ 816 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 +A+N+ + + + L L+ Q+HL A ++L EA+S G E+ I + + T Sbjct: 817 LAVNSVCHQFEQPLSLLLKPDQKHLGADVAIKQLEEAMSKALGEPSEVRISVGVDSSRET 876 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 PLE R+ ++E LAQA +I D+N++ L A+L +S+ Sbjct: 877 PLEVRRRFHKEILAQAHHGMITDDNVRWLSENMGAQLTPDSL 918 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 139/380 (36%), Positives = 221/380 (58%), Gaps = 8/380 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RKWRP F DV GQ+ ++T L N ++ RI HAYLF GTRG GKTS+A++ AK Sbjct: 17 MSYQALYRKWRPDNFNDVKGQDTIVTTLRNQINADRIGHAYLFCGTRGTGKTSVAKIFAK 76 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PCG C C+ I G +++IEIDAAS V++ R + + VQY+P GRF Sbjct: 77 AVNCEHPVDGNPCGECPTCKAIAAGTSMNVIEIDAASNNGVDNIRQIREEVQYSPTEGRF 136 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + Sbjct: 137 KVYIIDEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVAKIPITILSRCQRYDFHRITI 196 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 E I +L ++ E + E +A++ +A+AA+GS+RDALSL DQ +A + + V Sbjct: 197 ETIAGRLSELMKAEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFYLGKDLKYENVLD 256 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D ++ ++ + M+L+ + +G + + + + L + +++ + Sbjct: 257 VLGAVDTAVFSKMLSTILSGDVAVCMSLMEDLIMQGRDLSQFVTDFIWYLRNLLLIKTTK 316 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A + A +++ A+ + + Y + L +L ++ +R+ E+T + Sbjct: 317 DAERIEDVIEVSADNLEDLKKDAQNVDIDTLMYYIRVLSELSNDLKFSTQKRVKTEITFI 376 Query: 355 RALAFHPRMPLPEPEVPRQS 374 + + P M + S Sbjct: 377 KLM--RPAMDNSQDIGDVVS 394 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 172/643 (26%), Positives = 267/643 (41%), Gaps = 80/643 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQTF +VV Q+ V L N ++ GR+ HA LF+G RG GKT+IAR+LAK Sbjct: 1 MSYLVLARKYRPQTFEEVVEQQQVTRTLTNAIASGRVAHAILFTGPRGTGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G T TPC C +C EI G D+ EID AS V+ R+L NV++ PA + Sbjct: 61 AMNCEKGPTPTPCCACRSCLEIASGNATDVFEIDGASNNSVDQVRELRGNVKFMPAHSPY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP HV F ATT+P K+PVTILSRC + L + + Sbjct: 121 KIYIIDEVHMLSGPAFNALLKTLEEPPAHVMFFFATTEPHKIPVTILSRCQRHDLSFVGI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + LE + +E+I E ++L+L+A A GS+RD+LSL DQ ++S G VS + V Sbjct: 181 DPLVAHLETLCEKENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSAQGPVSHEMVLEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS-- 298 LG +D + L A++ + + +++ G + + EMLG + MV+L Sbjct: 241 LGIIDREVIFGLSGAVLAGDMTGALDILDTVYRGGHDIKRFYAEMLGHFRDLLMVKLGVR 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + +M+ R + + +L + ++ ++ VEM ++ L Sbjct: 301 AERLASLPGWAVEKMQAQTRDVTELFLSQAMALMLAEEDRVRFSSQPKIAVEMVFVKLLH 360 Query: 359 FHPRMPLPEPEVPRQSFAPV-APTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P +P+ + A A +AP++ + S+ AR Sbjct: 361 TKPVLPIDTLIQKVDALRKSFAQLAGNGNAPATASKDAAPERNADGAAGVSASRPAQARP 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 Q + PV + + A Sbjct: 421 APTENQPRPSSPPPASPLPEETGPVATGTTDPVP--------------------LDNAGT 460 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 W+A A + + + L L Sbjct: 461 WEAI----------------------------------LARIDEQYPLLGANLRNSTLAA 486 Query: 538 QVALNAWKEESDNAVCLHLRSSQRH---LNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 + + + SQ + L + + L + + + L + + Sbjct: 487 M---------EGGRLEIKVYGSQTNKAILAREQSMENLKQVCCDFFKTDINLAVTYTCDT 537 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 P + + D + F + Sbjct: 538 Q---PAQPDKQKPRTAGP--------DPLVAEALNIFGGTIVN 569 >UniRef50_Q7UQ66 DNA polymerase III gamma and tau subunits n=1 Tax=Rhodopirellula baltica RepID=Q7UQ66_RHOBA Length = 676 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 177/647 (27%), Positives = 278/647 (42%), Gaps = 23/647 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY V+AR++RP+ F +VGQ+HV AL + R+ HAYLF+G RGVGKTS AR+ AK Sbjct: 36 SYVVVARRYRPRDFTQLVGQDHVARALQGAIETSRVGHAYLFTGARGVGKTSTARIFAKA 95 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LN G TA P D + I+ G VD+IEID AS +++ R L NV P+R R+K Sbjct: 96 LNHPDGPTANPDSESDVAQAIDSGEDVDVIEIDGASNRGIDEIRSLRANVGVRPSRSRYK 155 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHML+ +FNALLKTLEEPPEHVKF+ TTDP+K+P+T+LSRC +F ++ + Sbjct: 156 IYIIDEVHMLTGAAFNALLKTLEEPPEHVKFIFCTTDPEKIPITVLSRCQRFDFAPVESD 215 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I +L I+ E E AL+LLAR A GS+RD+ SL +Q ++ DG ++ V ML Sbjct: 216 KIVQRLREIVEAEDNTVEDEALELLARRAAGSMRDSQSLLEQVLSFSDGHLTADHVHTML 275 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 GT DD + L EAM + + ++ I+EA A G++ L +MLG + V + A Sbjct: 276 GTADDQRLHRLAEAMADRDASAALSQIDEAIAAGVDAGRLAEQMLGYFRDLMAVAVGCEA 335 Query: 302 LGNDMAAIEL--RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AA + + ELA + + + ++ R+ +E T+++ Sbjct: 336 SLMRYAAASMHGSLGELAGRWGLQTVLAIVGLVDETLVRIRHSVHARVLLEATVIQVCHL 395 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + + PT +P +++ A Sbjct: 396 PDLQAISDLTAAASGAGGGKSAGEKKKRVAVASSSPSSAAMPTSAVPSSSTSPAAGSDAK 455 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 RV A + P ++ A + Sbjct: 456 VRVDSPAAPSGDH----------RAATSATASVAAGVPSGTPPVNSGSTAATSSQPAPQS 505 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAA-----KLAAEAIERDPWAAQVSQLSLPK 534 P VATP + A E L + W+ + ++ Sbjct: 506 QAVPSGGVATAVATPPQSEGAENSAAANESTTSTDGYPLISGDEATSSWSQVLQEMDPMT 565 Query: 535 LVEQVALNAWKEESDNAVCLHLRS----SQRHLNNRGAQQKLAEALSMLKGSTVELTIVE 590 A + + + ++++ LS + G L Sbjct: 566 ATLAKAAERVDSPEPGVLRMIFPGNSGLAFSRCQMPEHKEEILRTLSRVTGRRATLQFEA 625 Query: 591 DDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 + P+ + + ++ + RE I A+ +Q+ AE+ Sbjct: 626 TAVKKIE-PVAAAKPKNKNRMQRMRE-IQANPLVQSCVELLGAEIVR 670 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 159/443 (35%), Positives = 227/443 (51%), Gaps = 11/443 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLARKWRPQ F DVVGQ+HV+ L N + RI HA+LFSG RGVGKTSIAR+LAK Sbjct: 1 MDYLVLARKWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE G TPC VC NCREI +G +D+ EID AS +++ R+L + +++ P R+ Sbjct: 61 AINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+R +FNALLKTLEEPP HV F+ ATT+ K+P TILSRC F + L + Sbjct: 121 KVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL I E I L +A A +GS+RD+ S+ DQ I+ + +AV + Sbjct: 181 RQIAEQLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEEL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG D L EA++ + + + ++ E G++ +L + +V++ Sbjct: 241 LGRTDRRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGP 300 Query: 300 -AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + + + +Q LL + + + R+ +E + R Sbjct: 301 QQELLDLPGNDLSGIEAQVAEVSRETLQQLLDILLAEEESARRSHNPRLHLEAIVCRMAG 360 Query: 359 FHPRMPLPE-------PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP--LPETT 409 P +P+ E E S AP V P P LP Sbjct: 361 LPPALPIEEILSRMEDLETRLASSAPCLSETVPGAASFSPSKPGNSTTVRERPLTLPIVR 420 Query: 410 SQVLAARQQLQRVQGATKAKKSE 432 ++ + R+ + +QGA + Sbjct: 421 TEDRSVREPMAELQGAVRDPAHA 443 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 229/535 (42%), Positives = 309/535 (57%), Gaps = 13/535 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F ++ GQEHV AL N + GR+HHAYLF+GTRGVGKT+IAR+L+K Sbjct: 1 MSYQVLARKWRPKNFDELQGQEHVSRALVNAIESGRLHHAYLFTGTRGVGKTTIARILSK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE G+T+ PCG C +C EI++GRFVDLIE+DAASRTKV+DTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVYLIDEVHMLS SFNALLKTLEEPPEHV FLLATTDPQKLPVT+LSRCLQFHLK ++ Sbjct: 121 YKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTDPQKLPVTVLSRCLQFHLKHME 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + I L +IL +E I E AL+L++R+AEGS+RDALSL DQAIA G G+V + + Sbjct: 181 EQTISKHLAYILQQESIDFETPALELISRSAEGSMRDALSLLDQAIAFGQGKVQEEDIRT 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLGT+D + L+EA+ + + + E + +++ L E+L +H++A+ Q + Sbjct: 241 MLGTIDHQFMVKLLEALANKDSAEAIKAVAEMSHYPVDFADALKELLSRIHQVAIFQSTG 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L +E A I D+QLYYQ L R++L +AP R G+EM LLR LAF Sbjct: 301 VLLDQAAPYVED----FASKIASDDLQLYYQMGLHARRDLEWAPSPRQGLEMALLRMLAF 356 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 L +V + + + + + QP+SA Q A P S + + Sbjct: 357 R----LEPSQVVQNNSSQTSLDSEAKKKASLKQPESAAQPATVEPGLIENSALENNAAEK 412 Query: 420 QRVQGATKAKK--SEPAAATRARPVNNAALERLASVTDRVQARP--VPSALEKAPAKKEA 475 +K EP +P + A + + T P P + + + Sbjct: 413 YSAPKTAPEQKLEQEPKQEREQKPEPSTAHKTVTEETQSFSDAPEEPPFNPDDYASFSDD 472 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQL 530 + + + Q + P+ E A A ++ L Sbjct: 473 EKTEESIVDQYQTASSSKPEEQAAQASSNTVIENKTVKENTAQASSNEQAALASL 527 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 94/282 (33%), Gaps = 3/282 (1%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + + T Q Q+A + + + R Q Sbjct: 488 SSKPEEQAAQASSNTVIENKTVKENTAQASSNEQAALASLHSALGLNFSDDADSDRAPSQ 547 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +++ + + E + E S D + +PV E+A A+ E Sbjct: 548 KIEQPVQEEVVETGQTETGES-ESTQNEPEQSNDDEFRLQPVQPIEEEAEAESEPATSPK 606 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 + + L E WA V ++ L Q+A Sbjct: 607 LAQEQVSSVDEISLQETSLEKTVLVEAALEESGPPATEEALQWAQHVKKMDLTGTYHQIA 666 Query: 541 LNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 ++ + +D+ + L + +Q L+ A+Q + EAL+ ++++ + P V TP Sbjct: 667 QSSTVKWLTDDKIQLTVEPTQDILSTDTAKQAIEEALAQYFSKSIKIEWQFAE-PDVATP 725 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 Q + K +A E I Q L + F A LD+ SI+ Sbjct: 726 AMIWQRAAKAKHRKACEMITQHPFAQQLAQKFAATLDKNSIQ 767 >UniRef50_A1V9U7 DNA polymerase III, subunits gamma and tau n=5 Tax=Desulfovibrionales RepID=A1V9U7_DESVV Length = 622 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 172/645 (26%), Positives = 266/645 (41%), Gaps = 48/645 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS+ L ++RPQTFA+V GQE V L+ R+ AYLFSGTRGVGKT+IAR+ AK Sbjct: 1 MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC T T PC C+ CR++ QG VD++EID AS ++D + L + + YAP GR+ Sbjct: 61 ALNCATAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L +L E + ++P A++L+AR A GS+RD++SL Q +A G+ +++ + Sbjct: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L L+EA+ + V ++ E RG++ L E++ + M++ + Sbjct: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE 300 Query: 301 AL---GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A + + A+ P I +Q L G++ + Sbjct: 301 AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRV----------------LT 344 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + P M L + + P + P+ S T + Sbjct: 345 SLEPAMALELLLLNLAMLPRLMPVESLRPSGGGASAPSGSAAEGPASGCAATIPTPGTQG 404 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 A + A P + R P P+ + Sbjct: 405 TQGTAPAAGMTPSTAAPATPSDAPSPRVPWDEAPPTPPRSGIPPRPAPRMPEASP----- 459 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS-QLSLPKLV 536 +T + + H + A + D + + + Sbjct: 460 --------ATGRPASTSSSAGASPSHSDASDTAEHTPSGPRTWDGFLEFCQGRNGQGGRL 511 Query: 537 EQVALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 V A E D + L SS L + Q LA + G + + Sbjct: 512 ATVLRQATPEHGDGVLRLATMSSVQYERLTDAATQTTLAGLVRDYFGDACRVKVH----- 566 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 P + E +A A +Q L+ A + + + Sbjct: 567 ----PPTRVRRTEAELRKEA----EAHPAVQLLKEEMGACILKCT 603 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 165/639 (25%), Positives = 282/639 (44%), Gaps = 17/639 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + V ARK+RP F+ V+GQ H+ T L N + + HA+LF G RGVGKT+ AR+LAK + Sbjct: 4 FVVSARKYRPSVFSHVLGQAHITTTLKNAIRTNHLAHAFLFCGPRGVGKTTCARILAKAI 63 Query: 63 NCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ PC CD+C+ Q ++ E+DAAS VED R L+D V+Y P G +K Sbjct: 64 NCQQLTADIEPCNACDSCKSFNQRTSFNIYELDAASNNSVEDVRSLVDQVRYPPQNGAYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + + E Sbjct: 124 IYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKVLPTILSRCQIFDFQRIKPE 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I QL+++ +EHI ++ AL L++ A+G+LRDALS+ D ++ G G+++ +A L Sbjct: 184 DIVQQLKNVSEQEHIPYDEEALHLISLKADGALRDALSMFDVIVSFGAGKLTYEATLENL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 LD L EA+++ + + + + +E G + L ++ + + Q P Sbjct: 244 HILDYSCYFKLTEAILQNDIKACLLIYDEIIQSGFDGLYFLEGLVAHFRSLLVAQ-DPQT 302 Query: 302 --LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L +I+ R A+ P + Q + + ++R VE+ L+ + Sbjct: 303 LPLLEVAPSIQERYGMQAQQASPGFLLDALQLANQCALQYKESLNKRFHVELALIELASK 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + +P V+ + ++ + + V E T Sbjct: 363 MSTGHPKDSVLPNPGVTTVSNNPTIPIVSASKPTNASDRPSAAVNKTEATVVKDNKEADK 422 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 Q + K+ + A++ +++ A P+ ++K + Sbjct: 423 VIEQVQEELPKTAVSVASKYDRKEEEITQQIKEERPNPAAGLAPNIVKKGVLQS-----T 477 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 P + + + + + E + + E + W A QL L + + Sbjct: 478 IKIPQLSHIKANIDQPKVVETVNTTTVMEASVEFTKEIVLV-HWQAYTQQLKLAERMPAY 536 Query: 540 -ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 LN E +N + + ++ +++L L D AV T Sbjct: 537 NLLNQPIELENNTITIKFTNTVEERILADIKEELVNYLRNNLKHP------AIDVKAVFT 590 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 P + + R + ++QTL+ E+ + Sbjct: 591 PTQSGPQRPYTAQERFRYLANKNPHLQTLKEQLQLEVVD 629 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 249/593 (41%), Positives = 332/593 (55%), Gaps = 19/593 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY PARGRF Sbjct: 61 GLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QLE IL +E + E +AL LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEISQQLEFILGQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ Q + L++++ +A+ +M + + G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDERQVIGLLKSLCDADIAHLMQTTAQVLSFGADADEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + ++ A+ + P +QLYYQ LL GRKEL +APD + G+EM LLRA+AF Sbjct: 301 AAQHSL--YSEQILAFAKQLKPEQVQLYYQILLTGRKELAFAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPT-------------VPLPE 407 P + V + + + P+P T P+ + Sbjct: 359 PEKTVNRWVVDDTATLELPNGTSKAAAKTKPEPDVKLSAETTEVTEATETLAVLGTPVAQ 418 Query: 408 TTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAA-LERLASVTDRVQARPVPSAL 466 T + +A+ + + + + A +A L + AS+ Q S Sbjct: 419 TITAEVASLEVKDTPSDTEQVIEDDEGAPLKALTAEQDVLLSQAASMGFEPQNSNDDSPS 478 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 + + + + + + ++ + Sbjct: 479 SDVVVNDTSSAQANDDASVTDEYADYMHYGFDEQVSEAHPDAYLQEPTLDSHSAEESLLV 538 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 +S+ + E S A+ L + L L+ Sbjct: 539 AEGVSVDGAALSSSAVLNPEVSQEALTLAVSDEA---LAPVVDDILDAVLASR 588 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 107/284 (37%), Gaps = 4/284 (1%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + + AP A T V + V ++ Sbjct: 607 NAGSIKVGVAKKPLGAPQASTQVESVRPQAETEAQNHAPQALVTQEAPLLDKVSTDADRP 666 Query: 421 RVQGATKAKKS-EPAAATRARPVNNAALERLAS--VTDRVQARPVPSALEKAPAKKEAYR 477 A+ +P + P+++A R++S + D+ + +E PA + + Sbjct: 667 PWVAASDGSSQFDPLKLAQDTPLSHAQDNRVSSVGMEDKTTLDSILPVIEALPAIEAEAQ 726 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLV 536 M + A + + +L ++ E D W ++++ + + Sbjct: 727 GTGYAEKMLDTAMPAKLMSDVADDDSGIDAQLISEHQISGHEMDLHWYKMMAEVKIGGRI 786 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 Q+A+N+ + + L L+ Q+HL A ++L ALS V + + + Sbjct: 787 RQLAVNSVCQGLASPFPLLLKPDQKHLGADVAVKQLEAALSEYLQQDVSIAVNVGYDEHR 846 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 TPLE R+ ++E L QA++ +I N +Q L DA+L E+S+ Sbjct: 847 ETPLELRKRFHQELLQQAKQRLIGSNKVQWLLSQLDAQLQEDSL 890 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 172/661 (26%), Positives = 277/661 (41%), Gaps = 58/661 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R WRPQ F +VGQEH+ AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MSYVALYRTWRPQDFDGLVGQEHIRKALTNALESGRISHAYLFTGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PC CD+CREI +G D+IEIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTPHPCNTCDHCREITEGTSADVIEIDAASNRGIDEIRKLREQVHFAPVSSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+P TI SRC +F + + V Sbjct: 121 KVYIIDEVHMITADAFNALLKTLEEPPEHVVFILATTEPQKIPTTIHSRCQRFDFRRVTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L+ + +I EP AL+L+A A+G +RDA+ L DQ V+ + V + Sbjct: 181 DDIAAHLQKVAEGSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMA-NPVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D +LVE + + + L+N+ G + +L E+L + + + Q PA Sbjct: 240 LGIAGRDTMRALVEKIGRRDLPAALDLLNQLMDDGKDVTQVLTELLEYMRALLLYQADPA 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++ + + I + ++ + ++ E+ L Sbjct: 300 YQEIYLTDTAENLKTVEPLFTRSRILAATARIHEASLDVKRSLRSKIVAEICLYDLCRGE 359 Query: 361 PRMPLP-----EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 P E + + ++P PP+ + + Q P T+ + + Sbjct: 360 GESPAALMSRIETLEGKVTHLMAGGAPAVSPAFEPPREKRSKTQEAAYASPMATAPDMPS 419 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 Q + + + + P ++EA Sbjct: 420 VTQKEASFPSAEGPAAIPLE-----------------------------------KRQEA 444 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 K + V Q+ + E+ + + + A + W + L Sbjct: 445 SFEKQASAVPQRAGQKMEAEGASFTPPFEEKTDAPRQPSDLAGAQRLWNGVLQGLKQRHK 504 Query: 536 VEQVA---LNAWKEESDNAVCLHLRS--SQRHLNNRGAQQKLAEALSMLKGSTVELTIVE 590 + A + + + + ++ L + ++ L G E + + Sbjct: 505 MGFFAYAREATPLDFDGKRLTVGTATQLAKDRLERNDLRDEVLAILKAGTGQNFEFAVEQ 564 Query: 591 DDNPAVRTPLEWRQAIYEEKLAQ------------ARESIIADNNIQTLRRFFDAELDEE 638 + + + + +E ++ F L ++ Sbjct: 565 ASEKQMEAARKTAPRVASRPQHKAAPPAPPKEAPLPKEDDELPETVKRAMMVFGGSLVKD 624 Query: 639 S 639 Sbjct: 625 D 625 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 232/534 (43%), Positives = 321/534 (60%), Gaps = 13/534 (2%) Query: 1 MSY-QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS QVLARKWRP+ F ++ GQEHV+ AL N L R+HHAYL +GTRGVGKT+IAR+LA Sbjct: 1 MSQTQVLARKWRPRNFTELTGQEHVVRALTNALEQNRLHHAYLLTGTRGVGKTTIARILA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 K LNCETGITATPCG C C +I+ G F+DL+E+DAAS T+V++ R+LL+N YAP GR Sbjct: 61 KSLNCETGITATPCGTCTTCVQIDSGSFIDLVELDAASNTQVDNMRELLENALYAPTCGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTD QK+P+T+LSRCLQF+LK + Sbjct: 121 YKIYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPITVLSRCLQFNLKQIP 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 QI L+ IL +E I + +LQL+ARAA+GS+RDALSL DQAIA G G++ +V Sbjct: 181 QPQITDHLKKILAQEKIPCDILSLQLVARAAQGSMRDALSLLDQAIAFGAGKIEEASVRD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG +D L++A+ + NG ++++L +E AR + ++ L ++ +LHRIA+ Q P Sbjct: 241 MLGIIDHSYLFDLLDALTQKNGLKLLSLADEMEARCLSFDCALQDLAVILHRIALAQAIP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 ALG D+ R+ LA+ + P DIQL+YQ L GR +L APD G MTLLR L F Sbjct: 301 QALGEDIPDYI-RINALAKILAPDDIQLFYQIALHGRGDLSLAPDEYAGFTMTLLRMLTF 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 +PE V Q V+ ++ +V +PQ P P VP + QQL Sbjct: 360 -----MPEDLVAHQQPPQVSSISIPQSVEVGHEPQPIPDITPPVPADNSDLPWPQLVQQL 414 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + A + A A + E + ++ + SAL K A Sbjct: 415 KLAGMAKMLAQHSEAKILSADKIELCVPEVHKHLLEKKYQDKIQSALNTFFGKLVA---- 470 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 TP A+++ E EK + A + + + ++ ++L +P Sbjct: 471 --LDFFVGSITGLTPAAIQQRAEEEKQAQAIAAIEKDPVVQELIEQFDAKLIIP 522 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 3/164 (1%) Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 Q ++ P++++ E + P++ + A+ + PW V QL L + + +A Sbjct: 366 AHQQPPQVSSISIPQSVEVGHEPQPIPDITPPVPADNSDL-PWPQLVQQLKLAGMAKMLA 424 Query: 541 LNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 ++ + S + + L + +HL + Q K+ AL+ G V L + TP Sbjct: 425 QHSEAKILSADKIELCVPEVHKHLLEKKYQDKIQSALNTFFGKLVALDFFVGSITGL-TP 483 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 +Q EEK AQA +I D +Q L FDA+L SI+PI Sbjct: 484 AAIQQRAEEEKQAQAIAAIEKDPVVQELIEQFDAKLIIPSIKPI 527 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 252/573 (43%), Positives = 336/573 (58%), Gaps = 8/573 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCETG+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA++A GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALGLLAKSANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLGLLKALTDADIGALMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSL--YSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ-APTVPLPETTSQVLAARQQL 419 P + +V ++ +TP P A +Q A P+ E + + Sbjct: 359 PEKSVKRWQVDDAVKVDLSAQPALTPQATIPPEVPAERQLAVNAPVAEKKTLLATVANPE 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 ++Q T E A +N A + + + Q++ ++ + + A Sbjct: 419 AQLQAETT---PETALEDDEPELNAALIAEQQVILSQAQSQGFGASADPVVSSNTALNQD 475 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 + + T + + + + E Q Sbjct: 476 VNSSDPTDPDTALTEQTATEDVLDAQNTAGDLAPEPYVAEAYGQYDYAQSNDAQSNYAQF 535 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKL 572 N + + + H + A ++L Sbjct: 536 --NHAQSYDTSTPLDAYQDDYAHFMSEDAAEQL 566 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 1/278 (0%) Query: 364 PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQ 423 P + AP++ + VP QSA Q + + A + Sbjct: 704 PELSTKATNAPLAPLSTRPITHSIIVPSTQQSAAAQHLPLDPNDRPPWEDAPVAECHHGN 763 Query: 424 GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTP 483 + + R + A L +V A + A+ E ++ Sbjct: 764 AEPITTSRQVNEESHLRQESAALHAPLLAVEPVQVAPALTLPTNTQAAQVEQAAGQSHQL 823 Query: 484 VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLVEQVALN 542 + P+ L A +L + D W ++ L + V Q+A+N Sbjct: 824 NHPDEVPATPPRELDAAAPPAPASDLTVAQSITGHPLDLHWYKLMASLDIGGRVRQLAVN 883 Query: 543 AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW 602 + + N + L L+ Q+HL + A ++L +AL+ G+ ++ +V +P+ TPLE Sbjct: 884 SICQVQSNPLPLLLKPDQKHLAAQVAIEQLEQALTAALGAPRQVEVVIGTDPSRETPLEL 943 Query: 603 RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 R+ ++E L QAR+S+I D+N+Q L F AEL+ +S+ Sbjct: 944 RKRFHQELLQQARQSLIMDDNVQWLINRFGAELENDSL 981 >UniRef50_B0VJV5 DNA polymerase III, gamma/tau subunits n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJV5_9BACT Length = 533 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 144/409 (35%), Positives = 220/409 (53%), Gaps = 1/409 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RPQ F +V QEH+ L + ++ RI HAYLF+G RGVGKTS+AR+LAK Sbjct: 1 MSYIVLARKYRPQNFKEVYAQEHITEILQSAIATNRIAHAYLFTGPRGVGKTSLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC C NC EI G D+IEID AS T V+D R+L + Y + + Sbjct: 61 SLNCVNGPTTTPCNACSNCLEITAGTSPDVIEIDGASNTSVDDIRELQRELLYPASSSNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS+++FNALLKTLEEPP++V F+ ATT+PQK+ TI+SRC ++ K + + Sbjct: 121 KIYIIDEVHMLSKNAFNALLKTLEEPPDNVIFIFATTEPQKVLPTIISRCQRYDFKRIPI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E I + +L L+AR A+G +RDALSL DQAI+ ++ V + Sbjct: 181 ASIVQRLQEISVLEGIKIDSESLYLIARKADGGMRDALSLMDQAISYCLNNITIDKVRQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + + + + + ++ ++ +GI+ + + M + I +++ Sbjct: 241 FGMIPNQVYQKFLTLIYNKDTQGLINELHLIFEQGIDLQEFIANMQEFVR-ILILRKLQV 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + ELA + L+ R +L + + + +E +++ Sbjct: 300 QIKDINPDELSLFDELAELFGQNKLLYILSYLIACRNDLRGSSNPYLILEALMIKLCKLD 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 + A P ++ +PT S + VPL E T Sbjct: 360 EMEDIASLIGKININAFAQPVSMASPTTAKTIQSSYVASSAEVPLREET 408 >UniRef50_D0WGG2 DNA polymerase III, subunit gamma and tau n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WGG2_9ACTN Length = 862 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 175/598 (29%), Positives = 269/598 (44%), Gaps = 10/598 (1%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L RK+RPQTF DVVGQ H+ + N L R+ HAYLF G RG GKT++ARLLAK L Sbjct: 3 EALYRKYRPQTFDDVVGQIHIERTIKNALESDRVSHAYLFCGPRGTGKTTMARLLAKALL 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 CE G T P G C+ C I +G D+ E+DAASRT VE+ R+ ++ VQ+AP RGR+K+ Sbjct: 63 CEKGPTPAPDGECEQCLAIAEGTHPDVNEMDAASRTGVENVREEIIGRVQFAPVRGRYKI 122 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDP K+P TI SRC +F L E+ Sbjct: 123 YIIDEVHMLSTAAFNALLKTLEEPPSHVVFILCTTDPHKVPATIHSRCQRFDFHRLANEE 182 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L + E + E AL+L A+ A+G +RDAL+ +Q IA G+G+V+ Q +LG Sbjct: 183 IIARLGAVCASEGVEFEAEALELAAKRAQGGMRDALTTLEQLIAFGEGRVTMQVALDVLG 242 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 LD + +V + + + E G + ++ + + L+ AL Sbjct: 243 ALDSNDMTDIVARIARRDAAACFTWVAEYVETGADLAQFARDLASYVRDLYAFILTDGAL 302 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 +A ++ A P + L EL + + R+ E+ L R Sbjct: 303 EPRSSATNEQLAAQAGLFGPDRLAHVLSILGDVCAELRSSANPRLSFEIALTRMARPESD 362 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 + L + + ++ + +V + A + Sbjct: 363 LTLASLAARVEELERACAQGARPVDAPAVRVAASMFDSTSVADVPMAASAAADAPSASGL 422 Query: 423 QGA--TKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A+ + A + PV + A+ +A + + A + Sbjct: 423 SPSVIAAARAIKGGGAPSSVPVVDTGAPASAASDASGSDASSGAAAVASAERIPAVQSGL 482 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS-LPKLVEQV 539 + + + + E + + AKL+ A + W A V+++ L + Sbjct: 483 DSSPAPAADSPSASEPKLAFSSAEPSEAVRAKLSNPAALQRGWQAAVAEVKNLRTAYGAL 542 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQK------LAEALSMLKGSTVELTIVED 591 L+A A L + S + A QK ++ AL+ G V + Sbjct: 543 LLSASVSPVQGASGLAVEFSHENSFAFSAVQKPEVSEMVSAALAHAFGGEVPFEFTQG 600 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 248/520 (47%), Positives = 319/520 (61%), Gaps = 3/520 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSL--YSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMT-PTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P+ +V + + T P QA TS V + Sbjct: 359 PEKPVKRWQVEDAAKVSLPAQQPSTIPAATEQAVNRVENQAEAEKKTPLTSTVDSQPAAT 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + VQ ++ S ++ A+ A V + Q + A Sbjct: 419 EAVQSGFMSEPSVADPTLPQPEISKASQASQALVAEAAQQLLSDEDVSAVDGDDTAGEES 478 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE 519 A + ++ V +A + + + + Sbjct: 479 ALNAALIAEQQVILSQAQSQGFGASTEVVSSTEAVLISES 518 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 4/274 (1%) Query: 368 PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATK 427 AP + P + A P+ + AR Sbjct: 780 NASLPAHVAPAPHPQFDPNDRPPWEEAPVDTLADVEPVATSYQGSETARAPQVSQTPQPI 839 Query: 428 AKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQ 487 EP AT + + + + R A PV Q Sbjct: 840 IAPQEPELATGIAHSASIPTLPTDTGAANTKTANSEETRVEQAIAPHPQRDTAAQPVTQT 899 Query: 488 KEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLVEQVALNAWKE 546 + P++ ++ + + L + D W ++ L + V Q+A+N+ + Sbjct: 900 QTP---PQSSEETQQSAPSTALTLAQSITGHPLDLHWYKLMASLEIGGRVRQLAVNSICQ 956 Query: 547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAI 606 N + L L+ Q+HL+ A ++L +AL+ G+ ++ +V +P TPLE R+ Sbjct: 957 LQANPLPLLLKPDQKHLSAPVAIEQLEQALTAALGNPRQVEVVIGIDPTRETPLELRKRF 1016 Query: 607 YEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 1017 HQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1050 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 268/695 (38%), Positives = 369/695 (53%), Gaps = 56/695 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+TA++N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPNKFSELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+TG++A PCG C CR+IEQGRFVDL+EIDAASRTKV+DTR+LLDNVQY P +G + Sbjct: 61 SLNCDTGLSANPCGECGTCRDIEQGRFVDLLEIDAASRTKVDDTRELLDNVQYRPTQGDY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI+ QL H+L +EHI HEP AL LARAA GS+RDALSLTDQAIA G+ Q+ST VS M Sbjct: 181 EQIQQQLSHVLTQEHINHEPAALAQLARAANGSMRDALSLTDQAIAQGNNQISTVVVSDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +Q L ++ +M+E + V + A + +L E++ LLH+IAM Q+ P Sbjct: 241 LGLMDKNQILKILHSMIEGDKIAVFEQVESLAQTSPNYAHVLDELMSLLHQIAMTQVVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + + +LA +I +QL YQ L G+++LP++ D R G EM LLR LAF Sbjct: 301 VCKLETISARA-IYKLAGSISKEHVQLLYQMALNGKQDLPHSMDGRSGFEMVLLRMLAFT 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ ++ V +P+ + + P + + + Sbjct: 360 PVTPIDGFVDIIKTDMQNHIAEVGEMVTFAAEPEVVSPEPTILEAPVIEQEPKSTTNPMI 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A K ++P + ++ + PV +E E + A Sbjct: 420 ESESAVDPK-AQPETIVPYQSEVREEIDPEPTTAPEPVKEPVSVIVEDEENSAEKVDFSA 478 Query: 481 TTPVM------------------------QQKEVVATPKALKKALEHEKTPELAAKLAAE 516 M + + + +A E + L E Sbjct: 479 VMNDMFSEPEPEPEPEQPQVSVSTLQGPDESAMFQEQAEIMHEAHEMHPSQFDEQSLPPE 538 Query: 517 AIERDPWAAQVSQLSLPKLVE----QVALNAWKEESDNAVCLHLRS----SQRHLNNRGA 568 A D ++ + + + + VA NA + + L+ S S L + + Sbjct: 539 AYMNDDYSDVPIDVQVEQESQPQINTVASNAIDDLLALSDDLNTDSPSNESNESLVEKAS 598 Query: 569 QQKL---AEALSMLKGST------------VELTIVEDDNPAVR---TPLEWRQAIYEEK 610 KL ++ KG + ++L V D TP+ I E Sbjct: 599 INKLDSETPIVAEHKGESKPEMELKPELFEMQLDAVADSQTVPELNTTPIMSAPTIQTEP 658 Query: 611 LAQARESI--IADNNIQTLRRFFDAELDEESIRPI 643 QA D + L ++EL + +++ + Sbjct: 659 EVQAESLSQPERDPSKMGLVD--NSELVKVTVQKV 691 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 94/286 (32%), Gaps = 6/286 (2%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E E Q + +P L E S + Sbjct: 549 PIDVQVEQESQPQINTVASNAIDDLLALSDDLNTDSPSNESNESLVEKASINKLDSETPI 608 Query: 421 RVQGATKAKKS-EPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + ++K E ++ A + + P+ + + E+ Sbjct: 609 VAEHKGESKPEMELKPELFEMQLDAVADSQTVPELNTTPIMSAPTIQTEPEVQAESLSQP 668 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLA---AEAIERDPWAAQVSQLSLPKLV 536 P + + + + A + D W + QL+L L Sbjct: 669 ERDPSKMGLVDNSELVKVTVQKVDVQGLQAILPNGDKLTSAAQIDEWTNVIGQLNLTGLN 728 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 +Q+A++A + V L L + HL+N + LAEALS+ +++ L + + + Sbjct: 729 KQLAIHASFSREGDVVTLLLGQDKAHLHNETSVNALAEALSVFFDTSITLQVSFGEP--I 786 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 TP + I + + A+ + ++ +Q L+ F + +++P Sbjct: 787 NTPYALQMHINQIRNEYAQSILNSNPELQKLQSTFGTSVVSGTLKP 832 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 246/521 (47%), Positives = 319/521 (61%), Gaps = 7/521 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCG C +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L + Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + ++ A++LLA+AA GS+RDALSLTDQAIA G GQV V M Sbjct: 181 DEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D+ + L++A+ + + + +M + + + G + +L +L LLH+I + Q +P+ Sbjct: 241 LGTIDEHHVIVLLKALCDGDVDLLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ +++ A+ + P +QLYYQ LL GR++LP+APD + G+EM LLRA+AF Sbjct: 301 AAQ--LSQYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMALLRAIAFV 358 Query: 361 PRMPLPEPEVPRQS----FAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET-TSQVLAA 415 P P+ S P P + P P SQ A Sbjct: 359 PEAPVQRWMGEAGSEILLPDTPLPELGKGEDVAPTSARPDGTVKPVKPAESVLNSQAEAE 418 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + V+ K + S A+ + E+ ++D Sbjct: 419 VEDKAEVEEKAKVEASNEASVAMLSDAQASTAEQTNKLSDTDGPFEANLVAVDLVEADST 478 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE 516 + L +A +PEL+A+L+ Sbjct: 479 EKDALEEDEGALDLFAEQQLILSQAQSKGHSPELSAELSTN 519 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 94/264 (35%) Query: 377 PVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAA 436 + P S V P LA + Q A ++ Sbjct: 822 SAQQPNAYLNDEDRPPWVSPEPSLQAVTAPSDEVPNLAGQVDTQSESHARADAAAQIEQG 881 Query: 437 TRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKA 496 + + +L+ + + + E+ + + V+ P A Sbjct: 882 LDELSLEDQSLDDQSLDDQSLDDQSSEDLNSDDQGSNESGAFGNHPVQSPAAQEVSAPSA 941 Query: 497 LKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHL 556 + + + A W +S L + V Q+A+NA + + L L Sbjct: 942 VTEPVSQTTQVAFVADEITGHDTDLKWYRLMSALEIGGRVRQLAVNAVCKAFSEPLPLVL 1001 Query: 557 RSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARE 616 + +Q+HL GA +L +ALS G + ++ P TPLE RQ + E L QA + Sbjct: 1002 KPNQKHLAAPGAISQLEDALSKALGGSCQVAFSVGVEPERETPLEIRQRFHRELLEQAHQ 1061 Query: 617 SIIADNNIQTLRRFFDAELDEESI 640 ++ D NIQ L + AE++ +S+ Sbjct: 1062 GLLQDENIQWLTQVMQAEMEPDSL 1085 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 152/475 (32%), Positives = 232/475 (48%), Gaps = 6/475 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R +RPQ F DVVGQEH+ L N L + HAYLFSG RG GKTS A+L AK Sbjct: 1 MSYQALYRVFRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE + PC C C+ I G D+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPPEH F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I +++ I+ E + + AL ++A AA+G +RDALSL DQA++ +++ + Sbjct: 181 QAIVGRMKKIVEAEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + L + E N + +NE +G + L+ +M+ + + Q +P Sbjct: 241 TGAVSQHYIGKLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPD 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-- 357 + ++ + L+R IP +D+ L +E+ + R+ E+ +++ Sbjct: 301 LEGVLEKVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMKWTNHPRIFFEVAVVKLCQG 360 Query: 358 --AFHPRMPLPEPEVPRQSFAP-VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 A PE + + V A + + P S A Sbjct: 361 PKAGASAAAQPEVDNLVNKVRQLEQEIERLKTQGVQVSSAPAQAKEASRPQKSIKSAYKA 420 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 ++ + E + + + S + +A KA Sbjct: 421 PVGRIHEILKDATRPDLEKLKGCWGQLLAQLKQQNKVSHAALLNDSEPVAASSKA 475 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 148/454 (32%), Positives = 224/454 (49%), Gaps = 2/454 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RKWRP F DVV QEHV+ + N + GRI HAYLF GTRG GKT++A++ A+ Sbjct: 1 MSYTALYRKWRPLVFEDVVEQEHVVRTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I +D++EIDAAS V++ R++ D V YAP++ R+ Sbjct: 61 AINCINPKDGNPCNECEVCRGILDESILDVVEIDAASNNSVDNVREIRDEVVYAPSQARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP HV F+LATTDP KLP TILSRC +F K + Sbjct: 121 KVYIIDEVHMLSSGAFNALLKTLEEPPGHVVFILATTDPHKLPATILSRCQRFDFKKITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +++ I I + L+AR A+G+LRDALS+ DQ IA G ++ Q V Sbjct: 181 AGIAERVKLIAQASGINIDDDGALLIARLADGALRDALSILDQCIAEGSTTITYQNVLDA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--S 298 +G + DD +V+ + N E ++A + +A G + +++ + + +L + Sbjct: 241 IGIVSDDFISEIVDNIESKNVEGLVASVEMLSAEGRDILRFASDLVLYFRNLLICKLSKN 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P + + +M + + + L +L YA ++R+ +E+ L+ Sbjct: 301 PENILDVGKQYLDKMIAQSEAFTKERLIGIIKELSSFETQLKYALNQRVFLEVMLISISV 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + + + + P + + Sbjct: 361 GSYGQSGSDNNLLDRITNLESAVRTGATALGPSVKDRSSVSVQVNVANTSPVPSGKKLDN 420 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLAS 452 L + G++ K S + L L + Sbjct: 421 LPPIPGSSVPKSSAKGNSFNELEEWANILSDLKA 454 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 149/426 (34%), Positives = 234/426 (54%), Gaps = 8/426 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RK+RP TF DV GQ+H++T L N + RI HAYLF GTRG GKT++A++LAK Sbjct: 1 MSYMALYRKFRPDTFEDVKGQDHIVTTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE I PC C C+ I+ +++IEIDAAS V++ R++++ V+Y+P G + Sbjct: 61 TVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+ K+P+TILSRC ++ + + + Sbjct: 121 KVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFRRVTI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSA 239 ++I +L I +E I E +AL+ +ARAA+GS RDALSL DQ IA GQ ++ V Sbjct: 181 DEITKRLRVITEKEGIEAEEKALRYVARAADGSFRDALSLLDQCIAFYFGQSLTYDNVLD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LGT+D + L+ + + + +A++ E +G E ++ L + + + S Sbjct: 241 ALGTVDIEVFARLLRYIRKGSVTDCVAILEELIIQGRELTQFTIDFTWYLRNLLLAKTSE 300 Query: 300 A--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + +++ A++ + + + ++ YA +R+ +E+ L++ Sbjct: 301 DMEEILEMSSDQLQLLKQEAQSCDTELLIRFIRIFSELSNQVKYATQKRVMIEVALVKLC 360 Query: 358 AFHPRMPLPEPEVPRQSFAP-----VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 Q V T+ P + A + + V LP+ S Sbjct: 361 KPAMETDYASLIHRIQVLENRLEEGVFVTSKDEIEGAVPVVEKAKKASVPVELPKAVSAD 420 Query: 413 LAARQQ 418 L + Sbjct: 421 LQEVAR 426 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 142/390 (36%), Positives = 224/390 (57%), Gaps = 2/390 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + L RK+RPQ F D+VGQ HV+ L N L GRI HAYLF+G RG GKTS A++ A Sbjct: 1 MGFLSLYRKYRPQNFNDLVGQHHVVRTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+NCR+I++G+ +D+IEIDAAS +++ R+L + V++ P G + Sbjct: 61 ALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNEGEY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPPE V F+LATT+P ++ TILSRC +F L V Sbjct: 121 KVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTEPHQVINTILSRCQRFDFSLLPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I+ +L +I +E + E AL +LAR+A G LRDA+SL DQAI+ ++ V M Sbjct: 181 REIQERLRYICEKEEVEFEEEALNILARSANGGLRDAISLLDQAISYTGNNLNPIDVQGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL-SP 299 LG + + ++ ++ N + L+N +RG L+ +++ ++ +V+ P Sbjct: 241 LGKVSREVLSQFIKYVLNGNSVEALKLVNRIISRGNNVGRLIGDLIEYGRQLLLVKECGP 300 Query: 300 AALGNDMAAI-ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + ++ AR I + + L + +++ Y+ + R+ +E+ +++ Sbjct: 301 DSRIIEYPDEVLEKISGEARAIKTSRLIEIIDQLTVMERDIKYSDEPRLILEVGIIKMAN 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQ 388 + + E + + Sbjct: 361 PEAGGSIIDLEKRIARLENIISGKITANDG 390 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 169/617 (27%), Positives = 266/617 (43%), Gaps = 44/617 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L K+RP++FA++VGQE + T L N + +I AYLF+G RG GKTS AR+LAK Sbjct: 1 MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC TA PCGVCD C+ I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP HV F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L I ++E+I P A+ L+A+ ++G LRDA SL DQ + G V+ V Sbjct: 181 QLEAMVKHLSAIASKENIHISPEAVTLVAQLSQGGLRDAESLLDQ-LGLLAGVVTPDRVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++GT+ + L L+ A+ + E V+ ++ RG E L + + + + + Sbjct: 240 DLVGTVSEQDLLGLLNAIAQDKPEAVLDSTHKILDRGREPLTFLQNLAAFYRDLLIAKTA 299 Query: 299 PAALGND--MAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P + E A+ T I + L ++ + R+ +E+TLL Sbjct: 300 PNRHDLVACTQQTWTALVEFAQYFDMTMILAGQEHLRKAEVQIKNSTQPRLWLEVTLLGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L T P P AP+ P P V Sbjct: 360 L------------------------PSATTNIQPQAPNIAPRVIPPAVSPSYPPAVTQNH 395 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + ++ A+ + VT + A + Sbjct: 396 AVSSLPVAEPQTNHNSTLRQGSVTTNHHVAIAQNQPVTSSGAVEQQKNHNSAANSVSPPT 455 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 PV T + + +A W ++ L Sbjct: 456 PEPVAVPVPSAIVEAVTSEVVGEAQYDLTQ---------------VWQQVLANLQPKSRQ 500 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 E + + E D + + + + A +++ I + + Sbjct: 501 EMLRQMSQLIEFDGVMARIAIKQAWYDKGKSYLPMITAAFQQTFQREIQINIEKGISSNS 560 Query: 597 RTPLEWRQAIYEEKLAQ 613 + + ++ Q Sbjct: 561 TSAKKNPPPKDSSRVQQ 577 >UniRef50_Q47HW9 AAA ATPase, central region n=3 Tax=Betaproteobacteria RepID=Q47HW9_DECAR Length = 537 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 238/532 (44%), Positives = 315/532 (59%), Gaps = 6/532 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F+ +VGQEHV+ AL + LS R+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGITATPCG C C+EI+ GRFVDL+E+DAA+ T+V++ R LL+N YAP RGRF Sbjct: 61 SLNCETGITATPCGTCSACQEIDSGRFVDLLEVDAATNTRVDEMRQLLENAVYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+LK + V Sbjct: 121 KVYVIDEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L HIL E I + AL L+AR+A GS+RDALSL DQAIA G G+V V +M Sbjct: 181 LAITGHLGHILQAEGIPFDQPALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+D D +++EA+ A ++ + + R + + A L E+ LL R+ + Q P Sbjct: 241 LGTVDQDYLFTILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D R++ LA + P +QL YQ + GR EL APD G MTLLR F Sbjct: 301 AIDDDEPE-RDRLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYAGFVMTLLRLYTFR 359 Query: 361 PR--MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + VPR + A P AV + S P+ LP S + Q Sbjct: 360 PSTVADVVGAAVPRVNAAGAMPKAVRATPATQSRGDSIPEPVIIPKLPPIASGEMDWHQI 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + + + A++ R + N L RL+ +Q RP P L++A + Sbjct: 420 VASLSLSGLARELAQNCELR-QLSENQCLLRLSPAQGHLQMRPNPDRLQQALSDFFGRPL 478 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQL 530 + + Q TP E+ A +A + RD + + L Sbjct: 479 QVRIELAQ--NENVTPAETVGRQRQEQQERAATAIAQDTFVRDVIESFDASL 528 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 118/352 (33%), Gaps = 21/352 (5%) Query: 293 AMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMT 352 + + + ++ + ++ ++ + A + + + + D+ T Sbjct: 205 LVARSAAGSMRDALSLLDQAIAHGAGRVEEAQV-----------RSMLGTVDQDYLF--T 251 Query: 353 LLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 +L AL EP Q A + ++ + + +P Sbjct: 252 ILEALHGA------EPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPGAIDDD 305 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 R +L+ + A + + A N A + + + A Sbjct: 306 EPERDRLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYAGFVMTLLRLYTFRPSTVAD 365 Query: 473 KEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSL 532 + V A + + P + KL A W V+ LSL Sbjct: 366 VVGAAVPRVNAAGAMPKAVRATPATQSRGDSIPEPVIIPKLPPIASGEMDWHQIVASLSL 425 Query: 533 PKLVEQVALNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 L ++A N + S+N L L +Q HL R +L +ALS G +++ I Sbjct: 426 SGLARELAQNCELRQLSENQCLLRLSPAQGHLQMRPNPDRLQQALSDFFGRPLQVRIELA 485 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 N V TP E +E+ +A +I D ++ + FDA L E SI+PI Sbjct: 486 QNENV-TPAETVGRQRQEQQERAATAIAQDTFVRDVIESFDASLVESSIKPI 536 >UniRef50_A6GQQ4 AAA ATPase, central region n=1 Tax=Limnobacter sp. MED105 RepID=A6GQQ4_9BURK Length = 586 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 225/638 (35%), Positives = 320/638 (50%), Gaps = 68/638 (10%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q LARKWRP+ F +VGQ HV+ AL++ L R+HHAYLF+GTRGVGKT+IAR+LA+ +N Sbjct: 7 QALARKWRPRDFDSLVGQAHVVKALSHALDNQRLHHAYLFTGTRGVGKTTIARILARAVN 66 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 CE GI+ TPCG C C EI QGRFVDL+E+DAA+ T+V++ R LL+N YAP GR+KVY Sbjct: 67 CEQGISRTPCGKCQACVEISQGRFVDLLEVDAATNTRVDEMRALLENAMYAPTAGRYKVY 126 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHMLS +FNA+LKTLEEPP HV F+LATTDPQK+P T+LSRCLQF L+ L +Q+ Sbjct: 127 VIDEVHMLSTSAFNAMLKTLEEPPGHVLFILATTDPQKIPATVLSRCLQFALRQLPPDQL 186 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 L HIL+EE IA EP AL+LLA+AA GS+RDALSLTDQAIA G V+ V MLG Sbjct: 187 ADHLAHILSEEQIAFEPGALRLLAKAARGSVRDALSLTDQAIAYSAGHVTEDTVRTMLGA 246 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 +D L++A+ + +G+ ++ L N AA + A+L E+ + +R+++ + Sbjct: 247 IDQQVVHQLLQALAQGDGKALLELSNALAAASAPFGAILDELAAIAYRLSVAHFAGGLDA 306 Query: 304 NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 363 +D + ++ L D+QL YQ R EL AP+ +G M L+R LAF P Sbjct: 307 DDP--DQAALQNLQGAFGAEDLQLIYQIATHARAELHLAPEEHIGFSMALVRMLAFKPG- 363 Query: 364 PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQ 423 +SAP V A Q + Sbjct: 364 ------------------------GQGAVTRSAPLAPAVVKATVPVMAAKPAVAQSPLPK 399 Query: 424 GATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTP 483 A +A A P + A + + + P P Sbjct: 400 AAPQAAAPAVADDFDESPPWDTADDLPVAQSQPAAPAIKP------------------QP 441 Query: 484 VMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA 543 V Q P A P+++ ++ A+ + R A Sbjct: 442 VYNQSASGDLPSATN-------WPQVSQEVPAKGLTRQALVQ--------------AELV 480 Query: 544 WKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWR 603 + + + LR++ + +L AL GSTV L + + A +T + Sbjct: 481 EASREGDVLQIVLRTAIKAYTEASMVTRLEGALGQYYGSTVRLQMQFGE--AQQTAHAVQ 538 Query: 604 QAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 + L A++++ D ++ ++ A + S R Sbjct: 539 SETRRQALEGAKQALQEDPFLKDIQNLMGATVVSGSER 576 >UniRef50_C8NBE6 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBE6_9GAMM Length = 636 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 237/643 (36%), Positives = 336/643 (52%), Gaps = 14/643 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARKWRP+ F ++VGQ HV AL L RIHHAYLF+GTRGVGKT+IAR+ AK L Sbjct: 2 YQVLARKWRPKNFHELVGQTHVTQALTYALDHNRIHHAYLFTGTRGVGKTTIARIFAKSL 61 Query: 63 NCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC+ +++ PCG CD+C+EI+QGRF DLIE+DAASR++VE+TR+LLDNV YAP +G++K Sbjct: 62 NCQKNHVSSNPCGECDHCKEIDQGRFPDLIEVDAASRSRVEETRELLDNVPYAPVKGQYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VYLIDEVHM S SFNALLKTLEEPP HVKF+LATTDPQKLP TILSRCLQFHLK + Sbjct: 122 VYLIDEVHMFSASSFNALLKTLEEPPPHVKFILATTDPQKLPATILSRCLQFHLKNMSER 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 QI L HIL EH +EP AL LLA AA GS+RD+LSL DQA+A G G V T+ V+ +L Sbjct: 182 QISEHLAHILQAEHAEYEPDALHLLANAAAGSMRDSLSLLDQALAYGRGHVRTRDVATLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G + + Q L +++ + + + + ++ LL+ +L + +I + QL Sbjct: 242 GAVPEPQLLHMLQLLANGDAPGLRNTLESLDEYAPDYAGLLLRLLQQMQKITIAQLGAER 301 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 ++ A + +P +QL+YQ + LPY PD RM +EM+LLR +A P Sbjct: 302 YAEEIPAALHALAA---RLPVELLQLWYQIGNEAWQNLPYQPDARMALEMSLLRMIALQP 358 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 +P +P + AP + + Q A P+ + A Sbjct: 359 LLPTSDP-AQARPVREAAPASDSLTASLQAQTTPATATPAATTEPQAVAPSETASHGEAP 417 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 T +EPA + + D P E P E R A Sbjct: 418 AAPTTATVHAEPADN-----EPPPWEDTTPAAADDSNDAVPPWVSETIPDDSE--RTPAK 470 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER-DPWAAQVSQLSLPKLVEQVA 540 P +A A A + P + I+ + W+ ++ L L + + Sbjct: 471 KPESAPAAAIAPETAAPAAAKKPAAPPANTTDPGDLIDNLERWSDFLASLDLHEYPLLLL 530 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 N+ + L L ++ + AQ + A ++ + TI A++TP+ Sbjct: 531 ENSVPASWQAPL-LSLYTAPTGIIFDQAQNREQAAAAIAHALGIACTIEIQPADALKTPI 589 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E+R+ +A + + I+ + F L ++I+P+ Sbjct: 590 EYRRQKNAAAQQRAEQDFLNHPQIRAAQATFGPALQVDNIQPL 632 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 174/639 (27%), Positives = 274/639 (42%), Gaps = 59/639 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY V+ARKWRPQTF +VVGQ HV L N + RI H+YLF+G RGVGKTSIAR+LAK Sbjct: 1 MSYLVIARKWRPQTFEEVVGQPHVTRTLQNAIRSSRIAHSYLFTGARGVGKTSIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T TPC VC NC EI QG VD++EID AS ++ R+L + V+Y PA+ R+ Sbjct: 61 ALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAKSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPEHV F+ ATT+P K+P TILSRC +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTEPHKIPATILSRCQRFDFRRIPS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L HI +E +A L +AR A+GS+RDA SL +Q ++ +S + V + Sbjct: 181 HMLVDHLRHIAAQEDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFSRDGLSDEEVLDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D A++E + + ++ + RG++ ++ + +V Sbjct: 241 LGVIDRRSIHRTGTAVLEGDVRTCLDVVEDIYRRGMDIRRFCRQLCDYFRNLLVVAFGEG 300 Query: 301 AL--GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + + + E A P + LY+QT+L +E+ + R+ A Sbjct: 301 DSRRLDLPSDEKQLLAEAAGKTTPESLYLYFQTVLKSEEEIRRSTIPRI----------A 350 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + +S V + + V ++ A Sbjct: 351 LEMLLLRLARLPRLESLQGVLDKISALEQGLKGATTGGGGSSAAVRDTRPPAREAARAAP 410 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + + ++A R + + A+ + + P E P + + RW Sbjct: 411 PPMREPPPPGTGASHSSAGTGRDAPDPIVPEPATGGETIPDLPRIEG-EAVPLEDLSGRW 469 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 A ++ KE + K + + + ++ E+ Sbjct: 470 PAFLKWLELKEPILAAKLARSRIGSAAADSVELEVVEVFEEQ------------------ 511 Query: 539 VALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 L ++ +A TI + R Sbjct: 512 ------------------------LREPQTVARIGDAAEAFFRRRCAWTIRKKPEGTGRG 547 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 + + ++ ++ + EL + Sbjct: 548 DTQREKKKKA----LSKRLVMEHPVVLQALEILGGELVD 582 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 244/586 (41%), Positives = 333/586 (56%), Gaps = 15/586 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F+++VGQEHV+ A++N L R+HHAYLF+GTRGVGKT+IAR+ +K Sbjct: 1 MSYQVLARKWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ + PCG C C EIEQG FVDL+EIDAASRTKVEDTR+LLDNVQY P+RGR+ Sbjct: 61 SLNCELGMGSKPCGKCSTCVEIEQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPSRGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPP HVKFLLATTDPQKLP+TILSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QL+H+ +E + + P AL +ARAA+GS+RDALSL+DQAIA G+G VS V+ M Sbjct: 181 AQIAQQLQHVFAQEQLQNAPEALAQIARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D Q L L+ A++ E V L++ + + +++ +L E++ LLH++A+ Q P Sbjct: 241 LGLMDKTQVLKLLNAVLNKQNESVFELVDFMSEQAVDYSQVLNELMSLLHQVALTQFVPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + + +LA+ P IQL YQ L G++++P+A D R G+EMTLLR LAF Sbjct: 301 ACKLETISARA-IYQLAKNALPEHIQLLYQIALQGKRDMPFAADARTGLEMTLLRMLAFS 359 Query: 361 P---RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P + E S AP + + P V ET +A + Sbjct: 360 PVQVNTSVEELVAMTPSSAPSSGPSSAPLPMRDKHDLVTPTDDTPVESKETVVAAMAQAE 419 Query: 418 QLQRVQGATK--------AKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + + AT+ A K P+ A+ + N+ + + Q V + + Sbjct: 420 EAPQAPIATEIDNTQRVAAPKDAPSTASDSTSNNDFTNDSDFTARQNTQPLEVMGSKSER 479 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 +++ T E+ + I ++ Q Sbjct: 480 ADNAATQNQVEGAAAVEKTLADETSAQPFDDDEYHSAQMQDMEAQQAGILQEAEYFIQPQ 539 Query: 530 LSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEA 575 P + + +A SQ + ++KL +A Sbjct: 540 TQQPHDTNTAVDHQQEVHQQDASK---PQSQSTESLLALRRKLTQA 582 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 90/272 (33%), Gaps = 2/272 (0%) Query: 371 PRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKK 430 S +P T P A + + + Sbjct: 644 EPSSPEQYSPEQATPYTYSAQADAPYPNDADVPNANQAELGEAPPWATDDANNQTSLNEF 703 Query: 431 SEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEV 490 ++ + + + + A + + Sbjct: 704 NDINDINEVTVNEVTGGDVSVNELSHEALALDEVTVPVDAQEDIAENQQEIENTVFDPTA 763 Query: 491 VATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDN 550 + + + A + D W+A ++Q+ + L +Q+AL++ + + Sbjct: 764 HLAQDLECEVDYEVPAFLESGEKVTIAPQLDKWSALITQMQVAALTKQLALHSEFTQDGD 823 Query: 551 AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEK 610 V L+L ++ HLN A+++L ALS + + L + D A+ TP +Q+I + Sbjct: 824 KVVLNLVQTKEHLNTDSAKEQLQRALSDVLQQQITLEVHVGD--AINTPFALQQSINRVR 881 Query: 611 LAQARESIIADNNIQTLRRFFDAELDEESIRP 642 A++ + + +I + F+A++ +SI+ Sbjct: 882 FEYAKQVVETNESICMFKDMFNAQVLNDSIKA 913 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 256/550 (46%), Positives = 331/550 (60%), Gaps = 18/550 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N LS R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 28 MSYQVLARKWRPATFEQMVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TATPCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 88 GLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 148 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 208 DEIGTQLNHILTQEQLPFEVEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLTQVQTM 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ ++L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 268 LGSIDEQHVIALLKALTDADITVLMQTSAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 327 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++R A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 328 CAQQSL--YSAQIRAFAEQLTPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 385 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ +V +P V P +A + + Q Sbjct: 386 PEKPVKRWQVE-------SPAEVSLPVGQTSTSLAALATSAAEKKTDLVEQ-----PTDV 433 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE---KAPAKKEAYR 477 V A + A + + + S ++ P+++E A ++ E + Sbjct: 434 NVHAAVEINAPSDTADSALFAEQTLIISQALSQGYKLSESIAPTSIEIPVAAISQSEDTK 493 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 + +Q V T + + + +A I +D +A+ S+ E Sbjct: 494 VETLVSTNEQAVVNNTDSDTQLDYVYGHG-DYTQDVAPLDIYQDDYASFSSESYSSLTQE 552 Query: 538 QVALNAWKEE 547 VA A Sbjct: 553 MVAEQATINP 562 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 106/306 (34%), Gaps = 22/306 (7%) Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQV------PPQPQSAPQQAPTVPLPETTS 410 L F + P P +S +P AV +Q + AP + S Sbjct: 641 LDFKRKEPTIGPLSATRSDITTSPKAVKAVSQSVESIDSEFDFDDDFEPAPQMDGGFAQS 700 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 A + + ++ + + A + + Sbjct: 701 VTQANKNPEASQPLTQNGQITQNGQKPSGEKPVSVDDPNDRPPWEAAPATNMQHPVVHPV 760 Query: 471 AKKEAYRWKATTPVMQQKEVVATPKAL--KKALEHEKTPELAAKLAAEAIERD------- 521 + E A + + +E L + + + Sbjct: 761 SALEPVVPTAMQDELAPIDQAPHTPVSLMSDPIEDAVKESLTEPVTGLSNQTGLSVVQSV 820 Query: 522 -------PWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAE 574 W ++ L + V Q+A+N+ + + + L L+ Q+HL A +L + Sbjct: 821 SGNPLDLHWYKLMASLDIGGRVRQLAVNSVCQAQSDPLPLLLKPDQKHLAADVAIVQLEQ 880 Query: 575 ALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAE 634 AL+ G+ + +V +P TPLE R+ ++E L QA++S+I D+N+Q L + AE Sbjct: 881 ALTAALGNPRRVQVVIGSDPKRETPLELRKRFHQELLQQAQQSLIKDDNVQWLIQRLGAE 940 Query: 635 LDEESI 640 LD +++ Sbjct: 941 LDTDTL 946 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 161/508 (31%), Positives = 254/508 (50%), Gaps = 19/508 (3%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 VL RK+RPQ F +++GQ HV L N + ++ HAYLF+G RG GKTS A++ AK LNC Sbjct: 7 VLYRKYRPQGFDNLIGQNHVKNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLLNC 66 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 ++ I PCG C C++ D+IE+DAAS V+D RDL + V YAPA G+ KVY+ Sbjct: 67 QSPIDYNPCGECVCCQD----SNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKKKVYI 122 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS +FNALLKTLEEPP H+ F+LATT+P K+P TILSRC ++ + + + I Sbjct: 123 IDEVHMLSTAAFNALLKTLEEPPAHIVFILATTEPHKIPATILSRCQRYDFRRISQDDIV 182 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 H+++ I+ E + E +AL+L+++ A G +RDALSL DQAI+ +G+V+ Q + + G + Sbjct: 183 HRMKTIVEAESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGKVTLQDIIEITGAV 242 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D + +L++ + ++N E + N G E L EM+ L I + + Sbjct: 243 DTRKIGTLIQYINQSNIEGALEHFNTCFESGQEPHFFLEEMMIYLRDILVNRKLGEKATL 302 Query: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMP 364 + + E+A ++ P I Y L + + D ++ +EMT++ + + P Sbjct: 303 KKGHNDPQFYEIANSVGPDKIYDYMDLLNKAHSNMKFHNDVQLLMEMTIIEMINNQNQSP 362 Query: 365 LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG 424 + +Q + + + Q A T E T++ A ++ +QG Sbjct: 363 S----ILQQQIDELKQFIMGGNYSLQ-------QVAVTQNATEKTNEESLANIDIKDIQG 411 Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 A+ L + + +PS P+K + P Sbjct: 412 MMLNDPIGFIEASEEATKKGDDWTNLVT----EETVVIPSEKLTPPSKPLPPHEEHLEPP 467 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAK 512 + P +++ EL K Sbjct: 468 HVDDDEHLEPPSIEVENLATHNNELNPK 495 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 172/605 (28%), Positives = 279/605 (46%), Gaps = 15/605 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L K+RPQTF+ +VGQ+ + L + L RI AYLF G RG GKTS AR+LAK L Sbjct: 2 YEPLHHKYRPQTFSQLVGQDAIAQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILAKSL 61 Query: 63 NCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 NC + TA PCG CD C+ + QG +D++EIDAAS T V++ R+L++ Q+AP + R+ Sbjct: 62 NCLSSEVPTAQPCGQCDVCQAVIQGIALDVVEIDAASNTGVDNIRELIERSQFAPVQCRY 121 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y++DEVHMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + + Sbjct: 122 KLYVLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTDPQRVLPTIISRCQRFDFRRIPL 181 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L +I EE I EP A+QL+A+ ++G LRDA SL DQ ++ +++ + V + Sbjct: 182 PSMIKHLSYISAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQ-LSLQANKITVETVWDL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + L+LV A+ + ++ + +G E +L ++G + + + +P Sbjct: 241 VGAVPERDLLNLVRAIAADDSTALLERVRHLMDKGREPLIVLQSLVGFYRDLLIAKRAPK 300 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + M A+ + + Q L ++ R+ +E+TL L Sbjct: 301 RVDLVAITSPTWAEMIPFAQKLSAAALLASQQKLQSAEVQIKNTTQPRLWLEITLTGLL- 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P + +++ A A T T +A + + + +A Sbjct: 360 -----PSALEVMAKRTPASNAATNPATNRANSAAVDNARETTAATDITSSVKPKIAPSIT 414 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPV-PSALEKAPAKKEAYR 477 V+ A + P + +P AA S T+ + P P + A+ Sbjct: 415 PPIVKPAIASTIQHPVPPSVDQPAQTAATGASKSPTEPPVSLPAIPGEPNEPKAELSDSS 474 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER--DPWAAQVSQLSLPKL 535 + + V++ P A P K A A D W ++ L Sbjct: 475 ASSNNLDPAKAAVLSDPSAASATQPTPLKPAAPEKPIAVAFGNLSDLWKQILAVLQPRGT 534 Query: 536 VEQVALNAWKEESDNA-VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 ++ D + RS+ R L A + +++++ D Sbjct: 535 QMLMSQQGMLLGFDGVGAKVGFRSAPLQKAARERIPNLEAAFQTVFQRPIKISLEVVDTS 594 Query: 595 AVRTP 599 P Sbjct: 595 KPVDP 599 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 142/429 (33%), Positives = 224/429 (52%), Gaps = 1/429 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP+ F++V+GQ H++ L N + GRI HAYLF GTRG GKTS+A++ AK + Sbjct: 2 YQSLYRKYRPRNFSEVLGQNHIVRTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PC C C +D+IEIDAAS V+D R+L DN+ YAP+ ++KV Sbjct: 62 NCPNSVEGEPCNRCQICESANNNSLIDIIEIDAASNNSVDDVRELRDNIIYAPSICKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TILSRC +F K + + Sbjct: 122 YIIDEVHMLSGSAFNALLKTLEEPPSHAIFILATTEPNKIPATILSRCQRFDFKRIPSKV 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I + I + +I E RA+ ++AR GS+RDA+S+ +Q ++ + ++ V +LG Sbjct: 182 ISQNIGKIAKDSNINIENRAIAMIARHGNGSMRDAISILEQCVSY-NDVLTYDDVCDILG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 T++DD +LV+ + + N + V+ I++ GI+ L+ ML L I + + Sbjct: 241 TVNDDTLYTLVKRINDRNAKEVINQIDKLMLYGIDVSNLIKAMLSFLRDIVIYKTCGTES 300 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 + A + + + L+ + ++ YA R+ E+T+L+ + Sbjct: 301 EEILETEINDKILKASEFDMSFLSNAIEKLIDLQGKIRYAQSPRILFEITVLKLMNPEIS 360 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 + + + + + +V A + + + Sbjct: 361 PDIDSILDRIKKLENRLNNVKVAFNGENDAGIISKKDVVKSEKGVQNDKVAADEIKKEHI 420 Query: 423 QGATKAKKS 431 + A KS Sbjct: 421 EITESADKS 429 >UniRef50_A1SX03 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Psychromonas RepID=A1SX03_PSYIN Length = 774 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 229/524 (43%), Positives = 309/524 (58%), Gaps = 4/524 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP F +VVGQ+HVLTAL+N L+ R+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPGNFQEVVGQQHVLTALSNSLAQNRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+TATPCG C +C+ I+QGRFVDL+EIDAASRTKV+DTR++LDNVQY PA+GR+ Sbjct: 61 SLNCEKGVTATPCGACVHCQAIDQGRFVDLLEIDAASRTKVDDTREMLDNVQYKPAQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+HSFNALLKTLEEPPE+VKFLLATTDPQKLP+T+LSRCLQFHLKA+ Sbjct: 121 KVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPITVLSRCLQFHLKAILP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL +ILN E E AL ++A AAEGS+RDALSLTDQA+A G G ++ Q+V M Sbjct: 181 QEIETQLAYILNHEQATFEHAALTVIATAAEGSMRDALSLTDQALAFGSGHIAYQSVLKM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D++ L+ + N +V I+E G ++ L + L H IA+ Q+ P Sbjct: 241 LGSIDNNHLHYLLHFIASGNVSKVFLKIDEFVHLGADFAMLHQTLASLCHEIALSQMQPK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++ LA + P ++QLYYQ + G K+ +AP+ ++ EMT++R LAF Sbjct: 301 Q----NVTQKSAVQLLAERLTPEEVQLYYQIAVQGYKDYAFAPNGKIAFEMTVMRLLAFK 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + E + + + P+ E Q AA Q +Q Sbjct: 357 PANYISLDERQLGNPNSAEASDAQQSNIAAASESVESVEIAEAPVIENLQQNPAASQIVQ 416 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + + +S + + +++ Q EK E + Sbjct: 417 QEPKSADSVQSTSPSVEPLQRSAASSVPPPIERQPEPQQNQSAPPSEKIAPVAEVSHSRN 476 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWA 524 + K A + A+ + D + Sbjct: 477 MLRSHRLKRESAKKNQATTTEQPASVVASGAENVTAEFKADKYQ 520 >UniRef50_A5WFF8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=2 Tax=Psychrobacter RepID=A5WFF8_PSYWF Length = 751 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 214/492 (43%), Positives = 295/492 (59%), Gaps = 2/492 (0%) Query: 1 MS--YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLL 58 MS YQVLARK+RP+ F ++VGQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L Sbjct: 1 MSQQYQVLARKYRPKNFHELVGQSHVSKALINAIDHNRLHHAYLFTGTRGVGKTTIARIL 60 Query: 59 AKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 +K LNCETG+T+TPCGVC +C I+QGRF+DLIEIDAASRTKVEDTR+L+DNV YAP +G Sbjct: 61 SKCLNCETGVTSTPCGVCSSCVAIDQGRFIDLIEIDAASRTKVEDTRELIDNVPYAPTQG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 121 RYKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPL 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + + + ++L +E+I AL LA AA+GS+RDALSLTDQAIA G G+++ + V+ Sbjct: 181 PQQALSDHIANLLTQENIDFTQPALWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVN 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 MLG +D +SL+ + + N + A I + A+ ++ ++ + LLH+IAMVQL Sbjct: 241 DMLGLIDSADLISLLLDIYQGNAPALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLL 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P N ++ LA I P +QLYYQ ++ GR+++ A +EM LLR LA Sbjct: 301 PNVSLNVNDLQAQQITALAAQIGPDVLQLYYQIVIQGREQIKLANTPLQALEMCLLRLLA 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 F P + A A + ++ A Q + ++ + Sbjct: 361 FRPLALNEVAVASSNTPAHKASSDQPASIEMQAPNPHADQAEDYLTEQALSATSTESMAD 420 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + ++ + +L+S + + + A Sbjct: 421 TNIEPQSPNVNDADINNTANIDVKTHQDDYQLSSTSGADINPASLNETDFATPLASEPTA 480 Query: 479 KATTPVMQQKEV 490 + T P ++++ V Sbjct: 481 QDTRPQLEEQAV 492 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 246/549 (44%), Positives = 320/549 (58%), Gaps = 2/549 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE G+TA+PCGVC +C EI QGRFVDLIE+DAASRTKV+DTR+LLDNVQY P RGRF Sbjct: 61 GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL+HIL +E + E AL LLA+AA GS+RDALSLTDQAIA G G V V +M Sbjct: 181 QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ L L++A+ +A+ +M + A G + + +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEQHVLRLLKALTDADIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA+AF Sbjct: 301 AAQQSL--YSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P+ +V + + + T P V +T Q L Sbjct: 359 PEKPVKRWQVEDAAKVSLPAQQPTSTTPASNMPVVEQAVNQAVAEKKTPLTAERDSQTLP 418 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + KSE A++ L ++ D + A ++ + + Sbjct: 419 QAAISEPMAKSENTTASQQALSAEDMLAVDDAIDDEAELNAALIAEQQVILSQAHSQGFG 478 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 + + K E +A + + + Sbjct: 479 ANAETVSRTEALSTPEAKVDSSAESNSVSMPASNIDAEHNQAATVDTASVDQGPSPATLT 538 Query: 541 LNAWKEESD 549 D Sbjct: 539 EPVALSLDD 547 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 114/281 (40%), Gaps = 1/281 (0%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E E+ +S + V PT + P PP ++ P + + Sbjct: 739 PFDDDFEAELHLESQSNVTPTPPLDPNDRPPWEEAPVAAMDETHAPAASVNLQTESPVAA 798 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A + ++ L + S P + +A Sbjct: 799 QTAVEHLGAAPVAAQISPTDREATRVVQALEQAAGQESEPATQSPEPNTPQQPQAKELTQ 858 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLVEQV 539 Q ++ + + ++ + LA + D W ++ L + V Q+ Sbjct: 859 PKTQPQTQQPASVQSQSSETVQPTSSTALALAQSITGHPLDLHWYKLMASLEIGGRVRQL 918 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 A+N+ + N + L L+ Q+HL A ++L +AL+ G+ ++ +V +PA TP Sbjct: 919 AVNSICQVQANPLPLLLKPDQKHLAAPVAIEQLEQALTAALGNPRQVEVVIGTDPARETP 978 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 LE R+ ++E L QAR+S++ D+N+Q L F AELD++++ Sbjct: 979 LEMRKRFHQELLQQARQSLMMDDNVQWLINRFGAELDQDTL 1019 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 145/473 (30%), Positives = 242/473 (51%), Gaps = 8/473 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R++RP+ F DV+GQ+ V+T L N +S I HAYLF+GTRG GKTS A++ A+ Sbjct: 1 MSYKALYRRFRPKVFEDVIGQDQVITILKNQISSSNIAHAYLFTGTRGTGKTSTAKIFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + A PC C+ C I +D+IEIDAAS V++ R++ +NV+Y P++G++ Sbjct: 61 AVNCLSAEDANPCNQCEVCEGILTENIMDVIEIDAASNNGVDNVREIRENVKYPPSKGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P TILSRC +F K + + Sbjct: 121 KIYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRFDFKPVRI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE I + I E AL+L+A ++G+LRDALS+ +Q I+ + ++ V + Sbjct: 181 NDIMKRLESICEDIGIKTEEEALRLIALNSDGALRDALSILEQCISYTEDTLTYTNVVNI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP- 299 LG ++ + LV+ + + V+ LIN+ G + L+ +++ I + +++ Sbjct: 241 LGMVNYEFIFDLVDKIAAKDTSSVLTLINDILMEGKDAGILMKDIISHFRSILLAKMNVQ 300 Query: 300 -AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + R+R+ I + L +L Y+ + +E+ ++ + Sbjct: 301 LDELLTLPEERQDRLRQQGALFTINQITSFIYNLSDIESKLKYSAQPKTLIEIGIVGLCS 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 L Q + + + P ++ + ++ Sbjct: 361 KALDDSLEGLIERVQDL------ERKLASGNIKVEPHYNKSQISTPQNRSSHKTQPIEEK 414 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 + Q + + +T PV++ A ++ + Q EK Sbjct: 415 QEYKQPESSPPSVDANESTAEEPVHSGAPLNFDALKESWQQILEELRKEKKAQ 467 >UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PXF7_9SPHI Length = 596 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 153/551 (27%), Positives = 250/551 (45%), Gaps = 6/551 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQ+H+ L N + ++ A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFIVSARKYRPVTFDSVVGQQHITGTLKNAIHNNQLAQAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE CGVCD+C+ + G + E+DAAS V+D R+L+D V+ P G++ Sbjct: 63 INCEHITSEVEACGVCDSCKSFQNGNSFSIHELDAASNNSVDDIRNLIDQVRIPPQSGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS+ +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + V Sbjct: 123 KIYIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRIRV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L I +E + ++ L ++A+ A+G LRDALS+ DQ ++ + Q+S Q+V Sbjct: 183 EDMARHLAGIAEKEVVTYDLDGLHIIAQKADGGLRDALSMFDQIVSFSNKQISYQSVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD D L +A+++ + + ++ RG + + + L + + + Sbjct: 243 LNILDYDYYFKLTDAILQEEAAESLLIFDQVLNRGFDGNHFIGGLSSHLRNLLVTKEPAT 302 Query: 301 ALGNDMAA-IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 D++ I+ R E ++ + + + ++R+ VE+ LL+ Sbjct: 303 LKLLDVSDNIKKRYLEQSQKVSSGLLLSALNISNQCEINYKTSKNQRLQVELALLKMCHI 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + + V S QP S P P+ TS + A L Sbjct: 363 ATAIQMSQNGVLSGSAEVKKKRPDSAVAAPVSQPVSVPAPV-VTPVSIPTSAEIKAPPSL 421 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + K ++ ++ L ++ + Q + K EAYR Sbjct: 422 AKPVENHPPKLADSGKKGWGAVKVGVSIPNLNTIFEEKQVEESEGP---SLVKGEAYREV 478 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 +Q+ A + + A + Q+ + + Sbjct: 479 NLNEFLQKWNEFAERLKAENKINLYTLMTSAPPKLQPDNLIEVEVENAIQMDVLTSAKID 538 Query: 540 ALNAWKEESDN 550 LN + E N Sbjct: 539 ILNFLRVELQN 549 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 179/575 (31%), Positives = 288/575 (50%), Gaps = 7/575 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y +ARKWRPQ+F+D+VGQEH+ L N + GR+HHA+LF+GTRGVGKT+ AR+LA+ Sbjct: 1 MAYIAMARKWRPQSFSDMVGQEHIAKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ PCG CD+C++I G +D+ EIDAAS T V++ RD+++ VQY P G++ Sbjct: 61 TLNCKGSDPLHPCGECDSCKDIAGGNPMDVYEIDAASNTSVDNIRDVIERVQYPPVIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+++IDEVHMLS +FNALLKTLEEPP HV F+ ATT+ K+P TILSR +F K L V Sbjct: 121 KIFIIDEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVNKVPQTILSRVQRFDFKRLTV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QIR +L +I +E I AL + A A+GS+RD L+ DQA A +++ ++V ++ Sbjct: 181 DQIRSRLRYICEQEGIKATDEALDIFAEKADGSMRDGLTYFDQAYAFTGNEMTAESVRSV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--- 297 LG + SL++++ + + ++++A GIE+ LL L + +L Sbjct: 241 LGIPPVELFFSLIQSIENHDIKGCFRMVDDAVKIGIEFIPLLDGFGKFLRNLLYARLDAF 300 Query: 298 SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 +P AL N + + + A+++ DI + L+ + L Y+ + R+ VE T R Sbjct: 301 TPDAL-NITEELYTKYKSCAQSLTNGDILRISKMLIDLQGTLRYSTNPRLLVETTFARMA 359 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTP-TQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + L + AV T+V + + + P + Sbjct: 360 WLDRLVDLRKALAAINDPKSAENDAVKKKVTEVSAMIDAQEEVQASYDDPFAGYDQGGVQ 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + A A + A D Q P P AL A + + A Sbjct: 420 AFSRYEISAAWPSILSNIANDGDYVFSAAIAGTTLETGDPEQN-PFPIALTYAGSTENAE 478 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 W + V + L+ L+ + + + E+ + AA++S L L Sbjct: 479 NWGYRQMTEHPEYVERVTRILEDRLQTKIALSIRTRAFTESELAEQRAAKMSPYELD-LE 537 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQK 571 ++ L+ ++ + + + L + ++ Sbjct: 538 KEPGLSKLQQMFATELVFTKKLKKAALVAQTDEED 572 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 163/474 (34%), Positives = 237/474 (50%), Gaps = 12/474 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVL RKWRPQ F+DVVGQ V L N L GRI HAYLF+G+RG GKT+ A++LAK + Sbjct: 5 YQVLYRKWRPQVFSDVVGQPQVTVTLQNELKAGRIAHAYLFTGSRGTGKTTCAKILAKAV 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + PCG C++C I+ G +D++EIDAAS VE+ R+L + + PA +++V Sbjct: 65 NCLSLKEGDPCGECESCVGIDNGSVMDVVEIDAASNNGVENIRNLREEASFTPAAAKYRV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+ KLP TILSRC +F +D E Sbjct: 125 YIIDEVHMLSIGAFNALLKTLEEPPAHVVFILATTEVHKLPATILSRCQRFDFHRIDPEV 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L+ + EE+ E A L+AR A+G +RDALSL DQ + +++ + VS G Sbjct: 185 IADRLQFVAGEENAHLEREAALLIARIADGGMRDALSLLDQCM-GRSSEITLEVVSETAG 243 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--SPA 300 D SL + ++ NG + + I+E + L E+ G + +++ +P Sbjct: 244 LAGRDHLFSLADTVLRQNGGQALEQIDELHKASKDMVRLCEELAGHFRNLMLLKTMKNPQ 303 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L +++ A L ++ + DRR+ +EM LL+ + Sbjct: 304 NLIVVSQDEYQKLQVQAEAFTLAGTIHAIDVLQAAKERMFRGFDRRVELEMALLKLCS-- 361 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PE+ A + A + P+ A AP++ P + + + Q Sbjct: 362 -------PELDESVDAILRRLARLEKQPRAVIPEQAEAAAPSIKPPAAPMESQRPQTKPQ 414 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + EPAA P E D + + P E Sbjct: 415 GTNAEPEGCGEEPAAEAADMPQEQEPPEDKKGPVDMEALQQGAKRMTDWPEVLE 468 >UniRef50_D1VUH2 DNA polymerase III, gamma and tau subunit n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH2_9FIRM Length = 577 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 148/599 (24%), Positives = 260/599 (43%), Gaps = 41/599 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RK+RP F ++GQE ++ +L N + + HAYLFSGTRG GKTS A++ A+ + Sbjct: 2 YKALYRKYRPLDFNQMIGQEALVMSLKNQIKNNEVSHAYLFSGTRGTGKTSAAKIFARAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE I PC C +C I VD++E+DAAS V+D RDL D V Y P ++KV Sbjct: 62 NCEHPIDGNPCNKCKSCLSILNNTSVDVVEMDAASNNGVDDIRDLKDKVIYPPTFLKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS+ +FNALLK LEEPP H+ F+LATT+ +K+P TILSR +F + +E Sbjct: 122 YIIDEVHMLSKGAFNALLKILEEPPSHLIFILATTEKEKIPATILSRTQKFEFSRVSLEN 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L++I E + QL+A+ ++G++RDALS+ DQ ++ +S + +LG Sbjct: 182 IIKRLKYISQMEGKTLDDEVYQLIAKTSDGAMRDALSVLDQLLSFDSDHISIEKAMDVLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + L A + + R +++I++ A +G ++ +L ++L + + +V+ Sbjct: 242 ISSSESLFELTSAYLNKDAARAISVIDDIAIQGKDFLSLNNQLLKHMRDLMLVRTLKNPE 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 + +E A T +I L + L YA + R+ +EMT ++ Sbjct: 302 NLVYSTYLKDFKEQAATCDLDNILDIIDELKDLQVNLKYAENPRILLEMTSIKICNKKNF 361 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 L + + S + L + + + Sbjct: 362 KSL-----QLNLDNLSKRVEKLEFLGSLTKESSNNKNIYRQSLEKPNENDIINLNSDMKS 416 Query: 423 QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 + K S+ + +E + + Sbjct: 417 ENEVLEKSSQSDPL--------------------------------SVKTEENSDYNRSI 444 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN 542 +++ + + + L +TPE + + + + + ++ LV + Sbjct: 445 DEDKKEYHKNSLENIDDQLVDNETPEKSLGINDIKKDWNEILNDLKAVNQVPLVGLLNDA 504 Query: 543 AWKEESDNAVCLHLRSSQR-HL---NNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR 597 + + + HL N + + L G +++ I D+ ++ Sbjct: 505 KPLSFENGTLNICYGPGHEFHLKSTNEPKRLEIIKSVLKKRYGMDIDVKISIADDTTLK 563 >UniRef50_C7MLT3 DNA polymerase III, subunit gamma/tau n=3 Tax=Coriobacteriaceae RepID=C7MLT3_CRYCD Length = 900 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 176/626 (28%), Positives = 275/626 (43%), Gaps = 24/626 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ + L RK+RPQ F DVVGQEH+ L N + ++ HAYLF G RG GKT++ARLLAK Sbjct: 1 MA-EALYRKYRPQVFGDVVGQEHIERTLKNAIEQDKVSHAYLFCGPRGTGKTTMARLLAK 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGR 119 L CE G T+ P G C C+EI +G D+ E+DAASRT VE+ R+ ++ V +AP RG+ Sbjct: 60 ALLCEKGPTSEPDGSCRECQEIAEGVHPDVYELDAASRTGVENVREEIIGRVNFAPTRGK 119 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 K+Y+IDEVHMLS +FNALLKTLEEPP HV F+L TTDPQK+P TI SRC +F L Sbjct: 120 AKIYIIDEVHMLSIAAFNALLKTLEEPPAHVVFILCTTDPQKVPETIHSRCQRFDFHRLS 179 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 E+I +L + E++ E AL L+A A+G +R+AL+ +Q IA G+G+V+ Sbjct: 180 NEEIVSRLGAVCVAENVEFEGEALDLIAHRADGGMRNALTALEQLIAFGEGKVTVAGAED 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG+LD ++ A+ + + + G + +M + + ++ L+ Sbjct: 240 LLGSLDSSDLAEIMAAVGVRDAAACFSWVASYVETGADLAQFTRDMAQQVRNLYVMSLAG 299 Query: 300 -AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + A + + P + L EL A ++R+ E+ L R + Sbjct: 300 TDAALDVTDAERRELASELKLFGPNRLTHLLSILGELSSELRTASNQRLAFEIALTRMIR 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + L ++ + P Q ++ Q +P S + Sbjct: 360 PESDLTLEALAARIETLEEQLAQSKQPAQSTPSQREAVAQSESAAGIPVQASAHVPPVGA 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVT---DRVQARPVPSALEKAPAKKEA 475 Q Q PAA + A + SV + P + + Sbjct: 420 SQPAQPVPVVVPQSPAATSVAAANPSTPAVSQTSVPVQGAVQASMPASQSSATTATQSPT 479 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 ++ +PV+Q V T E A ++ A + W VS + K+ Sbjct: 480 PATQSNSPVVQPTASVETAAG-----------ETAEIISNPAALQRVWRQVVSIVKREKV 528 Query: 536 VEQVAL--NAWKEESDNAVCLHLRS-----SQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 V L + + ++ L + ++ L A G + L + Sbjct: 529 SYGVLLVNASVQVQAGGQGVAILFPADNPLAFSMAQKPEVKEVLEGAFRQAIGKDIPLAL 588 Query: 589 VEDDNPAVRTPLEWRQAIYEEKLAQA 614 + + + + A Sbjct: 589 KQKPSSTTQGAASGEPLERSPLDSSA 614 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 130/359 (36%), Positives = 208/359 (57%), Gaps = 2/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L RK+RP F +VVGQ H++ L N + RI HAYLF G RG GKTSIA++ AK Sbjct: 1 MAYQALYRKYRPSNFDEVVGQTHIIQTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC A PCGVC+NC+ G D+IEIDAAS V++ R+L+D V+YAP +G++ Sbjct: 61 TLNCTNSQDA-PCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQGKY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHM++ +FNALLKT+EEPP HV F+ ATT+P K+ TI+SRC +F + V Sbjct: 120 KIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTEPNKVLPTIISRCQRFDFNKVSV 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+++L + E I + L L+A+ A+G +RDALS+ DQ +A + + + Sbjct: 180 NDIKYRLSVVCKNEGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCTSHIDVNDIRKI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + L ++ + + +R + I + + G++ + L + + +L ++ S Sbjct: 240 YGVITSEDIGQLFSSIYKKDVDRFIKDIQKYSDMGMDIKRLTADFIHMLKDSLILDYSEN 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + +R+ ++ P + L+ + YA + +E +LL+ ++ Sbjct: 300 S-TLVSDMNKDMIRKYFKSAPIHFRIQCMEELMDTYNKYTYASNALDYLEASLLKISSY 357 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 159/501 (31%), Positives = 263/501 (52%), Gaps = 14/501 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R +RP+ F DV GQ+ ++ L N L +I HAY+FSG RG GKTS+A+++AK Sbjct: 1 MSYVALYRTYRPKFFKDVFGQKVIVQTLQNALLNEKIGHAYIFSGPRGTGKTSVAKIVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG CD C +++G D+IEIDAAS V++ RDL D V+YAP+ G++ Sbjct: 61 ALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASNNGVDEIRDLRDKVKYAPSIGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP++V F+LATT+P K+P TILSRC +F K +++ Sbjct: 121 KVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTEPHKVPATILSRCQRFDFKNIEM 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI L+ I+N+E++ P AL +AR AEG +RDALSL DQ ++ + +++ + + + Sbjct: 181 DQIEENLKQIINKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFTNDEITEEDIYTV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G L L++ + ++ + L+N+ G + ++ +++ L + + ++ P Sbjct: 241 SGGLSRRYINELLKVIYLKQPQKALDLLNQIIKDGKDIARMVSDIILALRDVLLDKIRPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 D+ I+ + I Y L ++EL + +R +E+ L++ + Sbjct: 301 KKYPDLKDIKPNL-----------IYAYLDILNDLQQELKFTTSKRAYLELALIKMINHE 349 Query: 361 P-RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 M E ++ V ++ QV + P Q P ++ ++ Sbjct: 350 SIEMVSLEDKITHLESDIVKLKELVNKAQVSQEAVKTPVQNIPASRPTNLKALVTVKEIE 409 Query: 420 QRVQGATKAKKSEPAAA-TRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + A + K+S + +N +L+ +A + V + + Y Sbjct: 410 DILNHADRQKRSLLNRGWPVLKDYDNPSLKPVAELLSEGTLEAVGNEDVMLLVYDDLYTA 469 Query: 479 KAT-TPVMQQKEVVATPKALK 498 K P ++QK + + K Sbjct: 470 KTMLNPEIKQKVLEILNQKQK 490 >UniRef50_A3YHQ6 DNA polymerase III subunits gamma and tau n=1 Tax=Marinomonas sp. MED121 RepID=A3YHQ6_9GAMM Length = 823 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 231/516 (44%), Positives = 314/516 (60%), Gaps = 5/516 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRPQ F ++ GQ+HVL AL N L R+HHAYLF+GTRGVGKT+IAR+ AK Sbjct: 1 MSYQVLARKWRPQNFIELAGQDHVLQALVNALKQQRLHHAYLFTGTRGVGKTTIARIFAK 60 Query: 61 GLNCE-TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCE GI+ PCG C +C EI +GRFVDLIE+DAASRTKVEDTR+LL+NVQY P RGR Sbjct: 61 CLNCETNGISPEPCGTCGSCVEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYTPTRGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 FKVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLPVTILSRCLQF+LK + Sbjct: 121 FKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFNLKNMS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 ++ + LE +L E ++++ L + +AA GS+RDALSLTDQAIA G+G +S V++ Sbjct: 181 PGRVVNYLEKVLTTEQLSYDEAGLWQIGQAANGSMRDALSLTDQAIAFGNGHISETDVTS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG ++ Q + L++A+V+++ ++ L+N+ A ++ A+ +L LLHRIA+ Q P Sbjct: 241 MLGLVNQAQVVGLLDAIVQSDAANLLKLVNDLADYQPDFVAICASLLDLLHRIAIEQQVP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + + +++ +A+ +P IQL+YQT+LIG+++LP A + G EM LLR +AF Sbjct: 301 GALEDQLGD-LAKVKLIAQQVPSEVIQLFYQTMLIGKRDLPLAHSPKAGFEMLLLRLIAF 359 Query: 360 HPRMPLP---EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 P P +A + + Q T P+ ++ A Sbjct: 360 RPAQATSVSTSPVALVTHTPESTSSASDASEPLIQNEIDSSVQEITAKYPDVKHEIDQAI 419 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 V+ + K + +P+ N L+ Q A+K + Sbjct: 420 SVATDVEKNLEPLKPLTNEPSTNKPLINKTLKGEGDKATIDQQGEQKDETLNVTAEKHSP 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAK 512 A+ V Q + T + + + + AAK Sbjct: 480 VNSASASVSSQTTEMDTKPPFEADEKPKVLDQAAAK 515 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 106/330 (32%), Gaps = 19/330 (5%) Query: 313 MRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPR 372 + + A D+ Q + + +T + A + Sbjct: 509 LDQAAAKEKMADLNKIMQDQGETKPD-----SAETLASVTETKLAAKELDSLPEQDVEAS 563 Query: 373 QSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSE 432 + A TP + A+ V G+ + Sbjct: 564 LNEDDAAAQQRQTPAST---------GLSQQTQTDQALNNDASEDSGLEVDGSEDGDLED 614 Query: 433 PAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVA 492 + +++ A++R A + +Q++ + + EA KA ++ Sbjct: 615 SDSEDDIELIDDHAMDRSAELVAVMQSQTIEVEEIAPITETEALVEKAIATNLEDVSYTK 674 Query: 493 TPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNA- 551 ++ AL + P + W +L L LV+ + +N+ E+ Sbjct: 675 AQIIVQPALGEKVEPIDHFSK----MTMQMWWLIAPRLPLTGLVQNILMNSCMLEAGEQG 730 Query: 552 VCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKL 611 + L + H+ N+ +++ A+S + V L I ++ + T E+ + + + Sbjct: 731 IKLEVPLEYGHMLNQVRYEQIQGAISHYFDAVVPLIINTVEDVSGVTAEEFAASKRAQAM 790 Query: 612 AQARESIIADNNIQTLRRFFDAELDEESIR 641 +A E + A +Q L +L +S++ Sbjct: 791 QEAIEHLNAHPIVQALSSTMGGQLIYDSVK 820 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 140/399 (35%), Positives = 220/399 (55%), Gaps = 3/399 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F +VVGQEH+ L N +S RI HAYLFSG RG GKT++AR+LAK Sbjct: 1 MAYLVLARKFRPQNFDEVVGQEHISQTLKNSISEKRIAHAYLFSGPRGCGKTTMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G T PCGVC+NC EI + VD++EID AS ++D R L +NV+++ A ++ Sbjct: 61 ALNCKNGPTIKPCGVCENCVEISKSSSVDVLEIDGASNNGIDDIRVLRENVKFSTASSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDE H ++ +FNALLKTLEEPP HV F++ATT+ K+P+TILSRC ++ K + Sbjct: 121 KIYIIDEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQHKIPITILSRCQRYRFKLISG 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ ++ I EE + AL ++ A+ GS+RDALSL DQA++S G+++ + + Sbjct: 181 AEMVCAIKSIGQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVSSNTGRITGDYMRGL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG L D +S+ + + + + ++ ++ E +G ++ L + + ++P Sbjct: 241 LGLLPKDIIVSVTDNIAKGDIHAILKIVKEIYEQGYNILQFARDLREHLRNVMIYSINP- 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ + + + L +E+ + R+ +EM LL+ Sbjct: 300 AIAEISSEDKKIFDVQKSLFTVSRYVRMNNLLSKALEEMRWHDQPRILLEMYLLKMS--E 357 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 P + E T + QP + Sbjct: 358 PYYDVGELINKITDLERNFRTCGNSQLPFEKQPAVRSES 396 >UniRef50_A9D7T4 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=A9D7T4_9GAMM Length = 882 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 250/542 (46%), Positives = 322/542 (59%), Gaps = 7/542 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF +VGQ HVL AL N L+ R+HHAYLFSGTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITA+PCG C +C EI +GRFVDLIE+DAASRTKV+DTR+LLDNVQY P+RGRF Sbjct: 61 GLNCEQGITASPCGQCSSCVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSR SFNALLKTLEEPPEHVKFLLATTDPQ+LPVT+LSRCLQF+LK+L Sbjct: 121 KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I QL ++L +E + + AL LLA+AA GS+RDALSLTDQAIA G G V V M Sbjct: 181 DEISAQLSYVLTQEQLTFDHAALTLLAKAANGSMRDALSLTDQAIAFGAGTVQLTQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG++D+ LSL A+V+ + E +M +I + + G + E +L +L LLH+I + Q +PA Sbjct: 241 LGSIDEKHVLSLFNALVQGDIENLMRMIGQILSFGADPEEVLRSLLELLHQITLSQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + +++ A + P +QLYYQ LL GRK+LP+APD + G+EM LLRA++F Sbjct: 301 AAQLSI--YSEQIKAFAEQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFV 358 Query: 361 PRMPLPEPEV--PRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P P+ V P + P T P Q P Q + P + + Sbjct: 359 PETPVTRWVVDKPAKVIIPERVTGQDNPQQ-PEAKDKPVSQDNSNGQPTEVQKEPVSEPV 417 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + V A + + E+ ++ PS+L A +A Sbjct: 418 PELVSKPEAAVIPQAEPDDETDDLLALNSEQALILSQASSQGVEPSSLNTAEPDSQAETT 477 Query: 479 KATTPV--MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 + E + PEL+ + A+ + D Sbjct: 478 HLDDKAVRLSPPEDPSKVNPPGSNQSELSQPELSPEQLAQDADFDAQYGFQQDEQELGDY 537 Query: 537 EQ 538 + Sbjct: 538 QT 539 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 100/279 (35%) Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 + + + TP + + ++ P + ++ A Sbjct: 576 ELEDDILAAVLAARDSLLTDLAKTPEESAGKKPEVQRKDFAPPKRQPQAENDDAAPSSLG 635 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 Q + K AA + A +R A + + + Sbjct: 636 GQAIVEVKSDAKAALQSQPVLATAIEDRPPWEESVEVAATENTTSSGGDEQGTDTHPMVS 695 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL 541 + V Q V + +A + P L W +S + + V Q+A+ Sbjct: 696 SQVEAQVPVQDQVQTEIQAQSFDPLPPLGEGEVTGNEVDLNWYRLMSAIDVGGRVRQLAV 755 Query: 542 NAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLE 601 N+ E + L L+ Q+HL A +L EAL + G+ ++++I + TPLE Sbjct: 756 NSVCHEFTEPLSLLLKPIQKHLAAEIAIVQLEEALGKVLGAEIKVSISVGVDGDRETPLE 815 Query: 602 WRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 RQ + E AQAR+ ++ D N+Q L AEL+ +S+ Sbjct: 816 VRQRFHREIQAQARQGLLTDTNVQWLMSQMGAELENDSL 854 >UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 Tax=Bacteria RepID=D2QBB5_9SPHI Length = 664 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 168/669 (25%), Positives = 269/669 (40%), Gaps = 42/669 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQEH+ T L N + + A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFVVSARKYRPATFDTVVGQEHITTTLKNAIKTNHLASAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC+ C C++C Q ++ E+DAAS VED R+L+D V+Y P G++ Sbjct: 63 INCQNLTAEGEACDACESCVSFNQNASFNIHELDAASNNSVEDIRNLIDQVRYPPQSGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNA LKTLEEPP + F+LATT+ K+ TILSRC F + Sbjct: 123 KIYIIDEVHMLSSAAFNAFLKTLEEPPTYAIFILATTEKHKILPTILSRCQIFDFNRIQP 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTD-QAIASGDGQVSTQAVSA 239 + I + L I +E I E AL L+A+ A+G LRDALS+ D + D + + V Sbjct: 183 QHIANHLAGIAQKEGITAETEALDLIAQKADGGLRDALSMFDLNVTFAADRIIRYKEVLD 242 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 L LD D L + ++ + + ++E +G + +V + + + + + Sbjct: 243 NLHILDYDYYFKLTDLLLAGKLPQSLLTVDEILRKGFDGHQFIVGLCRHFRDLLVCKDAA 302 Query: 300 A-ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + + + A P + + A D+R+ E+ L++ Sbjct: 303 TVQLLQVTENVRKQYLDQAMRAPMSFLLSALSLGGQCDMSYKQAKDQRLHTELWLMKLAN 362 Query: 359 FH--------PRMPLPEPEVPRQS--FAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPET 408 P +PLP+ P + P Q + AP V Sbjct: 363 LRNLLNWDAMPELPLPQNGAHSTERFTTPESGDEKKNGEHQPSQSRQAPTSPQLVESHPI 422 Query: 409 TSQVLAARQQLQRVQGATKAKKS------------------EPAAATRARPVNNAALERL 450 TS+ + Q A++ + + A AL Sbjct: 423 TSEPVNGYQPANGAAAASQPRSNGYAVASAGTLASSPSVAPSSAGTASVTTPTRPALVAD 482 Query: 451 ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELA 510 A +T + A + + P + P Sbjct: 483 AVMTQPETTGRPEVRPKPVIAPPQRPATSRLRSTVPLTTGPVQPATEAVSDVISTAPTRP 542 Query: 511 AKLAAEAIERDPWAAQ--VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGA 568 K +D W A + Q EQ+ LN + + + L ++ + Sbjct: 543 DKAFTFEDLQDVWRAFSKIRQQQNDSASEQLILNREIVLNGTTIHITLDNTLQVGYLTEV 602 Query: 569 QQKLAEALSMLK-GSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTL 627 + +L L S ++L T E ++ IY + + + + L Sbjct: 603 KPELLGYLRAELQNSQIQLEHTV-------TVQEVKKMIYSSQDKYNYLA-EKNPALHEL 654 Query: 628 RRFFDAELD 636 R+ + E+D Sbjct: 655 RKVLNLEVD 663 >UniRef50_A5N3V9 DnaX n=34 Tax=Clostridium RepID=A5N3V9_CLOK5 Length = 553 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 143/380 (37%), Positives = 228/380 (60%), Gaps = 2/380 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L R+WRP+ F+DVVGQ H+ L N + R+ HAYLF GTRG GKTS+A++LAK Sbjct: 1 MSYTTLYREWRPKNFSDVVGQNHITVTLKNQILNNRVAHAYLFCGTRGTGKTSMAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C++I QG +D+IE+D AS+ K+ED +D+++NV+Y P G++ Sbjct: 61 AVNCLDIQQGEPCNECEMCKKINQGISMDVIEMDTASKRKLEDIKDVIENVKYPPQEGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML++ + NA LKTLEEPP +V F+LATTDPQKLPVTILSRC +F + + Sbjct: 121 KVYIMDEVHMLTQEAVNAFLKTLEEPPLNVIFILATTDPQKLPVTILSRCQKFDFRRIKS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++L I+NEE I + R+L L++R +G++RDALS+ DQAI+ G G+V ++ M Sbjct: 181 SEIFNRLRAIVNEEGIFADDRSLNLISRICDGAMRDALSVLDQAISMGSGKVEYNSIVDM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL--S 298 LG + ++ L ++++E N E M +I++ G + + EM+ L + MV++ + Sbjct: 241 LGLVTNENLFHLTDSIIEKNVELSMKVIDDIVLSGKDIYNFIKEMIVHLRNLLMVKVSNN 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 P + + +++ A+ I +I + ++ + R+ +E+ +++ Sbjct: 301 PEEILDISEENIELLKKQAQKIRVEEIMRHINIFQDAEEQSKWVKQSRIYLELAVIKMCK 360 Query: 359 FHPRMPLPEPEVPRQSFAPV 378 Sbjct: 361 IEYDTSKEIMLSRLNKLEEA 380 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 136/358 (37%), Positives = 216/358 (60%), Gaps = 3/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R +RPQTF DV GQE ++T L + + +I HAYLF G RG GKT++A+LLAK Sbjct: 3 MAYKSLYRTYRPQTFKDVAGQEAIITTLKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLAK 62 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PCG C+NC++IE G D+IEIDAAS VE+ R L+D V+YAP +G++ Sbjct: 63 AVNCTGNP--KPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQGQY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+P K+ TI+SRC +F L Sbjct: 121 KVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTEPHKILPTIISRCQRFDFTRLTD 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +++ +++++L EE ++ +L+L+AR A G +RDALS+ +Q +A D +S + + Sbjct: 181 QEMVQRMQYVLKEEGKTYDDGSLELIARLANGGMRDALSILEQCLAYNDDHLSINDIHTI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + D +L++ ++ N + ++++ GI+ + L +++ +L I + + + Sbjct: 241 YGIVSMDDKTNLLKVLLSKNMSESLKILDKMDKSGIDIKRLTFDLIDILKDIVVYRNTKD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + + + I + + L+ ++ A D + E+ LLR Sbjct: 301 A-SIMSVMTQKDLENIVPYITSDECFSFIDILMDASEKYIRATDPHIYFELALLRLCN 357 >UniRef50_C5AFH6 DNA polymerase III, subunits gamma and tau n=1 Tax=Burkholderia glumae BGR1 RepID=C5AFH6_BURGB Length = 861 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 228/526 (43%), Positives = 301/526 (57%), Gaps = 2/526 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE +A EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVMHLERILGEERVAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTEAAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG LD + L++A+ ++G ++A+ +E A R + + L ++ GLLHRIA Q +PA Sbjct: 241 LGALDQTYMVRLLDAIASSDGPEILAIADEMALRSLSFSTALQDLAGLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEA-ADLRRFAEALSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFA 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P P P P+ S A Q Sbjct: 360 PAASGGAPVPGAAPAVAAGGRRAAAPVAPAGAGARDAAAHAMPPVAAAASARPAPAPVAQ 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 A + P A A + A +R A + R + P+ ++A A Sbjct: 420 AAAEPPPAAVAAPRAVPPAAARDVATAKRPAELPVRAEQ-ARPAESDEAAAVAPRESAPD 478 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQ 526 + + + ++ AL TP E R Sbjct: 479 LADEPAESPLASQLESSDVALGAGPTPPAEPAAMLEPSLRADTPPM 524 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 68/220 (30%), Gaps = 10/220 (4%) Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 + A +R + + P+ + P + Y PV Sbjct: 632 NVPTPRPRTAQPSRPAAAADPSAPPPWDDMPPDDYLPISADDHYGPPPDDGY-----LPV 686 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW 544 + P A W + L+L + Q+A N+ Sbjct: 687 FDSSPDDVRVAPQPAPAPADTRPLPPAIALDAIGYAGEWPQLAATLTLKGVAYQLAFNSE 746 Query: 545 K-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWR 603 + L + Q + KL AL+ G VE+ + PA RT Sbjct: 747 LISAQGGVLKLAVPVPQ--YADAAQVVKLKTALAEALGKPVEVAVEVG--PARRTAAALD 802 Query: 604 QAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 ++ +A + I AD +Q L R F A + E S+RP+ Sbjct: 803 AVERAKRQREAEQEIGADPFVQQLIRDFGARIVEGSVRPV 842 >UniRef50_A0L8F3 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8F3_MAGSM Length = 605 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 201/643 (31%), Positives = 300/643 (46%), Gaps = 44/643 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY VLARKWRP+ F D++GQEH + AL + L GRI HA+LF+G RG+GKT+++RLLA Sbjct: 6 SYVVLARKWRPRRFEDLIGQEHTVQALRHALEQGRIPHAFLFTGIRGIGKTTLSRLLAMC 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC TG+TA PCG CD+CR I +G D+ E+DAASRTKVE R+LLD V Y P+ R+K Sbjct: 66 LNCGTGVTANPCGACDSCRAIVRGEHPDVFEVDAASRTKVEQMRELLDGVAYTPSLSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y++DEVHMLS SFNALLKTLEEPP HVKF+ ATT+ +K+ TILSRC ++ L+ LD + Sbjct: 126 IYILDEVHMLSASSFNALLKTLEEPPTHVKFIFATTEVRKILPTILSRCQRYDLRRLDRD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L H+L+ E IA++ L ++ AA+GS+RDALSL DQAIA G G+V VS +L Sbjct: 186 GLARYLAHVLDVEQIAYDQEGLAAISHAADGSVRDALSLLDQAIAHGGGRVDYTHVSGLL 245 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D ++L + ++ G+E LL ++L + H++ Sbjct: 246 GLTDRQAVVALFADLCRGRLLEMLERAAYFHRDGVEPVVLLNDLLDITHQVTRELAVGVG 305 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 + ++E+ + +Q+ YQ LL GR++L A R +EM LLRA P Sbjct: 306 DAAQALSEHEGLKEVWPKLGLEHLQMLYQVLLRGREDLQMARLPRQALEMLLLRAAHLRP 365 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 PL + Q A V P V Q+ P T L+ Sbjct: 366 VPPLKQLVESLQRQAGVEPGERQASPAVKKFDAPGVGQSEVAP----TVHFAPKSAALEA 421 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKAT 481 Q + + P+ + P Sbjct: 422 PQAVQAPQVKRAKKQPTVLAPEPQPPVVPPDWPAVPPLQEEPTVVSPTPPAT-------- 473 Query: 482 TPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL 541 ++ E + +K L +K + + L+ + + + + Sbjct: 474 ---VESWEKLIEAARIKFPLLAQK---MESHLSLLSYTGGSGPHDPPCMEV------MIA 521 Query: 542 NAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV-RTPL 600 +A+ E S+ H L +L + G + I + + T Sbjct: 522 HAFAGE----------PSKVH----KNLMDLLVSLKLPNGV---VHIRKSSDGTRPDTEA 564 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 E ++ + + D IQ + R F+A++ + P+ Sbjct: 565 EKQKKAQDAYQNALTREVADDPLIQEIERRFEAKIIH--VEPV 605 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 146/455 (32%), Positives = 234/455 (51%), Gaps = 12/455 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RP +F +VVGQ+H++T L N + +I HAYLF G RG GKT+IA+LLAK Sbjct: 1 MSYKALYRTYRPSSFEEVVGQQHIVTTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE A PC C +C I+QG D++EIDAAS V++ R+L++ V+YAP GR+ Sbjct: 61 AVNCEDQQNA-PCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEGRY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP HV F+LATT+PQK+ TI+SRC ++ + Sbjct: 120 KVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTEPQKVLPTIISRCQRYDFSKVGQ 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ +L +EHI E AL+L+A+ A+G +RDALS+ DQ IA ++ V+ + Sbjct: 180 NEIITRVRCVLEQEHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQNHITAAHVNEI 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + +++ + + + ++ I +G++ + L +++ +L + + Sbjct: 240 YGITTVSEKIEMLQWIFQHQAQSLLEKIRLLNEKGVDIKRLTSDLIEILKECVIFIYTQD 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + D+ L+ ++ A E+ +L+ +A Sbjct: 300 VTLLNKINETEANAIINGK-SSRDLLALIDILMETLEKYRTASSAASYFEVAVLKMMA-- 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + A V P P P P S PQ + P PE S+ ++ Sbjct: 357 -------ELDQSRRTAAVIPPVYSQPATAPSIPAS-PQASTGKPRPEVQSESTLMPEEAD 408 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTD 455 + + P A + + + Sbjct: 409 LTEDTLPLEMMPPLPAPPEETGRVIQEKTVEVHPE 443 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 158/485 (32%), Positives = 236/485 (48%), Gaps = 4/485 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRPQ+F ++VGQEHV L N ++ RI HAYLF G RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPQSFQELVGQEHVSRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C NCR I G D++EIDAAS V++ R+L + V+YAP G + Sbjct: 61 ALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQEGNY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP +V F+LATT+ K+P TILSRC +F + L V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTEVHKIPATILSRCQRFDFRRLGV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +LE I IA L +AR AEG +RDAL + DQ ++ ++ + V+A+ Sbjct: 181 NEIVDRLERICRHHEIAASRETLSFIARKAEGGMRDALGILDQCVSYAGNEIDSGDVTAI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + D+ + + + E V+ +N+ RG E L ++LG +++ P Sbjct: 241 LGAVADEILYDMTQGLAEDRLSDVLMQLNDLINRGKEVRPLTRDLLGHYRDRLILRTVPG 300 Query: 301 ALGNDM--AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A I +++E +D+Q L ++ + R+ +E+ +R Sbjct: 301 AADLVDMPDDIAAKVKETGHVYSVSDLQACIALLSQAENDMKWTTHPRILLEVAFVRIAC 360 Query: 359 FH-PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + P P A A M + + A + + + R Sbjct: 361 REWGKGAGNAPASPTSGGAGGAADMEMRALRRRVESLEAKVREMQQAVENQGAASGEKRP 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 L + + + + P+A A RLA + A A + Sbjct: 421 SLDS-EALRRPQPAMPSATISKLDEETKAAARLAEGPIHIDQVNACWPNVLAAALERISP 479 Query: 478 WKATT 482 K + Sbjct: 480 LKRSI 484 >UniRef50_D2R5L2 DNA polymerase III, subunits gamma and tau n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5L2_9PLAN Length = 715 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 187/645 (28%), Positives = 284/645 (44%), Gaps = 13/645 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V+AR++RPQ F +VGQ V AL N ++ GR+ HAYLF+G RGVGKTS AR+ +K L Sbjct: 42 YMVVARRYRPQDFTQLVGQAQVSQALGNAINTGRVGHAYLFTGARGVGKTSTARIFSKAL 101 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G T PCGVCD CR + G VD+IEID AS +++ R L V P+R RFK+ Sbjct: 102 NCVNGPTTQPCGVCDICRGVASGDDVDVIEIDGASNRGIDEIRQLRSGVNIRPSRARFKI 161 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPPEHVKF+ TT+ K+P+T+LSRC +F L + Sbjct: 162 YIIDEVHMLTTPAFNALLKTLEEPPEHVKFIFCTTEADKIPITVLSRCQRFDFAPLPSQA 221 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L I EH+ EP AL +LAR A GS+RD+ SL +Q ++ G Q++ V LG Sbjct: 222 ILDRLAAIAQNEHVEAEPEALAILARRAAGSMRDSQSLLEQLLSYGGKQITVDDVHRALG 281 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ--LSPA 300 T + +L+ A+ + + I+ AA G++ L ++LG L ++ S Sbjct: 282 TAKSSRIATLMAAVATRDAAGALCEIDAAAGEGVDLGQLAEQLLGYLRDAMVLSVGASSD 341 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 L + + E +R LA + Q + L + R VE+ ++R + Sbjct: 342 MLLHVALSDEPAVRTLATNWGTETLLAAVQIVDQSLTRLRQSTHGRTLVEVAVVRLCSLG 401 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 L + +S AP+ T A P + Sbjct: 402 QLDMLADLVAQLKSGAPLPAIPAGTAAAPRAALPPTSLPAAAPSGPPAQKKTAELAPPPP 461 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A PV AA A R P +A PA+ +Y Sbjct: 462 SLAPPAPVAAVSRPTPPVAPPVTRAAEAPRAVEPIRPAPPPRATAAPTTPARSSSYVDDG 521 Query: 481 TT---PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 P +AT + ++ + + D W + ++P+++ Sbjct: 522 EIYEGPSASDLAELATISGSRTSVAPAPVETVRPAPSRLEDASDLWQQVL--STVPEMLA 579 Query: 538 QVALNAWKEESDNAVCLHLR------SSQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + A A + L +R ++ + + ++ L A+ G + L + Sbjct: 580 EFASKATQTAISAPDRLVVRFPKAYTQAKEYCDRPEKRRDLERAIDQAAGRKLRLELELT 639 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + V P+ Q + I+ F AE+ Sbjct: 640 ADSVVAGPIPSAPQQPRMSRRQRMIDVHRKPIIRQAIEIFGAEVI 684 >UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, putative n=2 Tax=Rhodothermaceae RepID=Q2RZH6_SALRD Length = 728 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 160/535 (29%), Positives = 237/535 (44%), Gaps = 13/535 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V ARK+RP F +VV QEHV L N + + R+ HAYLFSG RGVGKT+ AR+LAK + Sbjct: 6 YLVTARKYRPSLFTEVVAQEHVTETLKNAIRMERLAHAYLFSGPRGVGKTTAARILAKAI 65 Query: 63 NCETGIT-----ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NCET A PC CD+C E GR +++ E+DAAS KV+D R+L + V+ P Sbjct: 66 NCETPREEREDGAEPCCECDSCESFEAGRSLNVFEMDAASNNKVDDIRELREKVRIPPQG 125 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 + KVY++DEVHMLS+ +FNALLKTLEEPP H F+ ATT+P K+ TILSRC +F + Sbjct: 126 DQKKVYILDEVHMLSKQAFNALLKTLEEPPAHALFIFATTEPHKVLPTILSRCQRFDFRR 185 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + V +I +L I E + + +L LLAR G+LRDALS DQA++ + + Sbjct: 186 IPVPEIVQRLREICETEGVEADEESLMLLARKGNGALRDALSAFDQALSLCGATLEYGEL 245 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV-Q 296 + LG +D D L + + + ++ L+ G + + +LV + L + + Sbjct: 246 TQALGVVDQDLYFRLTDHVAAQDTAGMIELVRHVVRSGYDLQEMLVGLAEHLRNLLVAHS 305 Query: 297 LSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 L AL + R + A D+ ++ +P R+ +E TLL+ Sbjct: 306 LGGEALEEVAESTRTRYADEAERFDEADLLRLLTMAADTEDDIKQSPQPRLTLETTLLKM 365 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L +A P VP +A + A P P + + Sbjct: 366 AQLRRSADLRAVLEKIDRLEQMAEDG-DLPEAVPGDGVTASETASAPPAPPESEKSENTE 424 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK---- 472 + A+ +EP A T ++ P + APA Sbjct: 425 TGGAAGREASPDAAAEPRPGYGPESTAPPNAPEDAPSTKDAESDPKNETPDGAPADVVDE 484 Query: 473 --KEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAA 525 E + + P+ + + D A Sbjct: 485 AGNETLSASDEDDAPNDDAPNDEAPNDEAPDADAQGPDDGDEPPSSDAPADGTDA 539 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 135/404 (33%), Positives = 225/404 (55%), Gaps = 5/404 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RK+RPQ F+D+VGQEH+ L N + L RI HAYLF+G+RG GKT+ A++ A+ + Sbjct: 2 YLTLYRKYRPQKFSDMVGQEHITKTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFARAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+ + PC C C+EI +G FV++IE+DAAS V+D R + + V Y PA G +KV Sbjct: 62 NCKNSVDGKPCEKCVVCKEIAEGAFVNIIELDAASHNGVDDIRQINEEVLYTPAVGVYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNA+LKTLEEPP +V F+LATTDPQK+P T+LSRC +F + + Sbjct: 122 YIIDEVHMLSPAAFNAMLKTLEEPPPYVVFILATTDPQKIPATVLSRCQRFDFRRISTSD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSAML 241 I L + E+I E A++L+AR A+G +RDALS+ +Q I+ D +++ V ++ Sbjct: 182 ICDCLLDYMQRENIEIEKEAVELIARLADGGMRDALSILEQCISFYIDEKITHSKVLKLV 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA- 300 G +D+ ++ A++E + + +A+ NE +G + ++L + + + + Sbjct: 242 GAVDNALLFEMMNAVIEMDAAKAIAVCNEINQQGRNIKQFAKDLLMHTRNLLIAKTTEQK 301 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + + + A + I Y + E+ + R+ +E+ +++ Sbjct: 302 TEILDYTQEHVRELTQQANELAIETIFRYIKNFTELDMEMKTSTFPRITLEVAVIKLCT- 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV 403 P + L + V + + + + +++ + T Sbjct: 361 -PEVDLSKDSVLDRMLSIEKQLEEVKKNGIKVVEKASEEAVVTE 403 >UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=cellular organisms RepID=B2GFF0_KOCRD Length = 1264 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 150/534 (28%), Positives = 240/534 (44%), Gaps = 13/534 (2%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L R++RP+TF DV+GQEHV L L R++HAYLFSG RG GKT+ AR+LA+ LNC Sbjct: 4 ALYRRYRPETFEDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNC 63 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G TATPCG C++CR++ + +D+IE+DAAS V+ RDL + +AP R R+K+ Sbjct: 64 AEGPTATPCGRCESCRDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDRYKI 123 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM++R FNALLK +EEPPEHVKF+ ATT+P K+ TI SR + + + E Sbjct: 124 FIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVPPEP 183 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAML 241 + LE + EE ++ EP L L+ RA GS+RD+LS+ DQ +A D + +S A+L Sbjct: 184 LMRYLEQLCQEEGVSTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDERGISYDLAVALL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G +V+A + V + ++ G + + ++L + +V P + Sbjct: 244 GYTHAALLDDVVDAFAAGDAATVFSSVDRVVQTGQDPRRFVEDLLERFRDLVVVNAVPDS 303 Query: 302 LGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 N + R+R A + ++ E+ A ++ +E+ R L Sbjct: 304 AANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGATSPQLHLELLCARIL 363 Query: 358 AFHPRMPLPE-----PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 + R+ P +PP P +A P P + Sbjct: 364 LPSADDTTRGITSRVDRLERRLSIPRGAGIRPGGPSIPPAPGAADGVDPAAPHAPGADAM 423 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASV-TDRVQARPVPSALEKAPA 471 + + A + + +++ T + +P + P Sbjct: 424 APVAPDSPSSDASAAPAREAADPAPSGPVRQDGSQPGRSALTTPDIAEPSIPEDEAENPR 483 Query: 472 KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAA 525 + P ++ P A EH+ + + + A Sbjct: 484 GSDHPAAGDPVPQGERGPQGNHPPADGTTTEHDAAGQERSPATGAPADPTKSPA 537 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 161/527 (30%), Positives = 257/527 (48%), Gaps = 30/527 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N ++ G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMYRPQSFDDVVGQEHVTKTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + PC CD C+ I QG D+IEIDAAS V++ R++ D V+YAP++ ++ Sbjct: 61 AINCPNSVDGEPCNECDICKSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQSKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI +L ++ +HI ++ A+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 DQIIERLRYVAESQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALNV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++D+ +L+ + + A ++ A G E L+ +++ + M + Sbjct: 241 TGSVDEASLNALLNDVANGQVKDAFARYHQFIAEGKEVNRLINDLIYFVRDTIMNKT--- 297 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A E L + + + ++ ++ + E+ L++ Sbjct: 298 ------AQRETEYDALMA-FDLDTLYKMIDLINDTLVSVRFSVNQNVHFEVLLVKMA--- 347 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 E+ ++ APVA + Q+ P + +S +L + L+ Sbjct: 348 --------ELIKEGDAPVANPDM----HSANAHQAPSAPQPAQQNNDVSSALLQRLEHLE 395 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A K + + N+ R + Q V + K K W+ Sbjct: 396 QELNALKQQGVTSTNTPPKQKSNSRGRRRSKNSYSMTQIAKVLDSANKEDIKLLKDHWQE 455 Query: 481 TTPVMQQKEVVA-----TPKALKKALEHEKTPELAAKLAAEAIERDP 522 + A A E + A++ E + D Sbjct: 456 VIDHAKNHNQKALVSLLQNSIPVAASEKSVLVQFEAEIHCEIVNDDD 502 >UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured bacterium URE4 RepID=C0JZX8_9BACT Length = 577 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 160/640 (25%), Positives = 274/640 (42%), Gaps = 75/640 (11%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS Y V ARK+RP +F ++GQ+++ L+N + G++ HAYLF G RGVGKT+ AR+ A Sbjct: 1 MSQYIVSARKYRPDSFETLLGQDNIARTLSNSIKRGQLAHAYLFCGPRGVGKTTTARIFA 60 Query: 60 KGLNCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC G PCG C++C ++GR + E+DAAS V+D + L++ VQ P G Sbjct: 61 KMINCAHPGPDMEPCGECESCVSFQEGRSYCIHELDAASNNGVDDIKALIEQVQVPPQVG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++ VY+IDEVHMLS+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + Sbjct: 121 KYSVYIIDEVHMLSQSAFNAFLKTLEEPPAHAIFVLATTEKHKILPTILSRCQTYDFNRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + + L I +E I + +L ++A+ A+G++RDAL++ DQ +A + + V Sbjct: 181 GIPDMVRNLRGIAAKEGITIDDESLHVIAQKADGAMRDALTIFDQTVAFCGTDIKYEDVV 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 L LD D + +VE + + ++ +E ++G + + L + + + + Sbjct: 241 RNLNVLDYDYSFGMVENFLSGSYAAALSSFDEILSKGFNALHFVAALSSHLRDLVVARTA 300 Query: 299 PAALGNDMAA-IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 ++ ++ R RE A P + A + R+ +E L++ Sbjct: 301 GLDALLELPDSLKQRYREQAARCPLQFLYDALGVTTACEAGYKAAVNPRLHIEFALMKLS 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 R + P+P + PQ AP +P + ++ A++ Sbjct: 361 FLTGRTDV----------------------SAAPRPVAVPQAAPVIPSEKPSAIPSEAKE 398 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 A P P+ +AP A Sbjct: 399 SPAPAPADKTAVAVAPV----------------------------PTRQRRAPKNGSALS 430 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVE 537 A ++K P A + A L +A +D W A +++ + Sbjct: 431 MNAIMQEKEEKPEQEAPVAAE------------AALPDDAAVKDGWKALIAKFEARPRLA 478 Query: 538 QVALNAWKEESDNAVCLHL-----RSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 A S+ A + ++Q+ + L + + + ++ + DD Sbjct: 479 NALAKAELRMSEEAGVKSVFFSVSNAAQKQWIEEKLLRDLETSFREIL-QSRKVNLHVDD 537 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 P P E + + EEK A++ + ++ Sbjct: 538 IPEEE-PGEKKPYMPEEK---AKDLMDKHPEVRAFVADLG 573 >UniRef50_A7HGU5 DNA polymerase III, subunits gamma and tau n=5 Tax=Cystobacterineae RepID=A7HGU5_ANADF Length = 606 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 198/651 (30%), Positives = 293/651 (45%), Gaps = 63/651 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y VLARK+RPQ F ++ GQ+HV+ L+N L G++ HA+LF+G RGVGKT+ ARL+AK Sbjct: 1 MNYLVLARKYRPQQFGEMSGQQHVVRTLSNALKTGQLAHAFLFTGPRGVGKTTTARLVAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C EI +GR VD++EIDAAS V++ RD+++ V+Y PAR R+ Sbjct: 61 ALNCEKGPTAEPCGACTPCVEIAEGRAVDVVEIDAASNNGVDNVRDIVEAVKYRPARDRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DEVHMLS +FNALLKTLEEPPEHVKF+LATTD K+P TILSRC +F + L + Sbjct: 121 KVFVVDEVHMLSTGAFNALLKTLEEPPEHVKFVLATTDVHKVPETILSRCQRFDFRRLTL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +QI QL + E + P AL L+AR AEG +RDALSL DQ A+ AV+ Sbjct: 181 QQIADQLAKVAEAEGMRLAPGALALVARQAEGGMRDALSLLDQVRAAAGDAPDEAAVAEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D + A+V G ++A + ARG+E + + E++ L + + +L PA Sbjct: 241 LGAVDAAAISRICGALVHREGGALLAELEALHARGLEMKRVAEEIVRHLRNVVVARLVPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + +R A P + + ++ + R +E+ LL + Sbjct: 301 TPLDLPDGELAEVRAQAAAADPAQLTRLFDLAQRAVVQVKLSEQPRYALEVALLEGVFLA 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + E ++ A AP + PP P + P ++ A Sbjct: 361 PGAQVSELVARLEALARGAPLPPRSAPPSPPPPSAVPAPGGQTGAGGAAARTGLASSGTP 420 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 ++ P A+ P + PS +A RW+A Sbjct: 421 GCAEGSEPAGWRPLPASTGSPAAGHPERSSDASAA------EPSRGAPTAYGSDAERWRA 474 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 +++ P + Sbjct: 475 AVDEVEKVSPAGAP-------------------------------------------MLK 491 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR--- 597 + D + L + + + + +L L+ G V L I PA Sbjct: 492 QAVLRGIRDGEIDLVMPTDFLARSVERRRSELEPVLTQFLGRPVRLAISVGAPPAAEAQS 551 Query: 598 ----TP-------LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 TP A + + A+ RE+ NI+ R D +D+ Sbjct: 552 PDATTPTPVPASIAATEAAERQARSARVREAARNHPNIREAVRILDGGVDK 602 >UniRef50_C4XU00 DNA polymerase III gamma and tau subunit n=2 Tax=Desulfovibrio RepID=C4XU00_DESMR Length = 654 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 177/664 (26%), Positives = 274/664 (41%), Gaps = 41/664 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L K+RPQ FADV GQ+ V L+ + RI AYLFSGTRGVGKT++AR+LAK Sbjct: 1 MSTISLTAKYRPQRFADVAGQDAVKRILSRAAAEDRIAPAYLFSGTRGVGKTTLARVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCET T PC VC CR+I G D+IEIDAA+ KV+D R L ++V YAP R+ Sbjct: 61 ALNCETAPTGEPCNVCSQCRQITAGVSPDVIEIDAATHGKVDDARRLKEDVGYAPLNSRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+ +FNALLKTLEEPP V F+LATT+P K P TI+SRC + K L Sbjct: 121 KVFIIDEAHMLTTAAFNALLKTLEEPPGRVTFILATTEPHKFPATIISRCQHYLFKRLAQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L E + +E +A+ L+AR GS+RD++SL Q +A G +++ + Sbjct: 181 SELEAHLSSVLMREAVPYEAKAVSLIARRGAGSVRDSMSLLAQVLALGGAELTEADARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L+EA+ +G V+ L+ + +G++ L E+ + + +++ + Sbjct: 241 LGLAGQEVFFGLIEAIRAEDGPAVVELLRQVLDKGLDIGFFLRELASMWRNLFLLRQAGE 300 Query: 301 ALG---NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYA-----PDRRMGVEMT 352 + A A I I +Q L G++ + + + + M Sbjct: 301 RALPVVDLPAEEAGEWLVWAGRIEAAHIHACWQMTLEGQRRVQTSLEPALALELLLLNMA 360 Query: 353 LL-RALAFHPRMPLPEPEV------------PRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 L R L P + P +PQ Q Sbjct: 361 YLPRLLPLQNLASCAAPAASGPGGSGGSSGRSGGQGGGLTPRQPQGGRPGGYRPQPLADQ 420 Query: 400 APTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 PET ++ AA P + R + T + Sbjct: 421 VAPYGQPETGPGRDQGGYGRPAAGLDAAPPTAQSAAPRSYPPQAAPPVSRSEAPTPHAAS 480 Query: 460 RPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE 519 P + A A A P + + ++ A Sbjct: 481 GPGNGSTPPAQAPAAAPAAGGYAPSGSGQSASFAASG--QGHGSSGHDDVPRPPQAAPAG 538 Query: 520 RDPWAAQVSQLSLPKLVEQVALNA---WKEESDNAVCLHLRSSQ--RHLNNRGAQQKLAE 574 W + Q + + + + + + ++ L + ++L E Sbjct: 539 PRTWDGFLRQAGRGSDMVALKHAQGTFSPDPAPGELVVSCTNAFHRGRLAHPDKLRQLTE 598 Query: 575 ALSMLKGSTVELTIVEDDNPAVR-TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 A G V + + E + R +P + R + + ++ FDA Sbjct: 599 AAEAYFGPGVTVRLTEGEAANDRMSPHDLR------------DYVDNHPEVRQAVTAFDA 646 Query: 634 ELDE 637 E+ E Sbjct: 647 EIIE 650 >UniRef50_Q3SLE5 DNA polymerase subunits gamma and tau n=5 Tax=Betaproteobacteria RepID=Q3SLE5_THIDA Length = 581 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 250/639 (39%), Positives = 340/639 (53%), Gaps = 73/639 (11%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 LARKWRP+ FAD+ GQEHV+ AL+N L+ GR+HHAYL +GTRGVGKT++AR+LAK LNC Sbjct: 14 ALARKWRPRAFADLRGQEHVVQALSNALTQGRLHHAYLLTGTRGVGKTTLARILAKCLNC 73 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 E+G++ATPCG C C +I+ GRFVDL+E+DAAS T V++ R++LDN QYAP GR+KVY+ Sbjct: 74 ESGVSATPCGTCSACTQIDAGRFVDLLELDAASNTGVDNMREVLDNAQYAPTVGRYKVYI 133 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS+ +FN++LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + + Sbjct: 134 IDEVHMLSKPAFNSMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKPMTPALVA 193 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 L +L +E + EP AL LLARAA GS+RDALSLTDQAIA G G++ AV AMLGT+ Sbjct: 194 GHLGDVLAQERVDAEPAALNLLARAAAGSMRDALSLTDQAIAYGGGRIEAAAVEAMLGTV 253 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGN 304 D L++A+ +G+ +M A RGI ++A L ++ LL ++A+V +P A+ + Sbjct: 254 RRDYLFDLLDALAAGDGDALMTQARLLAERGIAFDATLQDLGNLLTQLALVLHAPGAVED 313 Query: 305 DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMP 364 A R R A + +QLYYQ L GR++LPYAPD G MTLLR LAF P Sbjct: 314 --GADAERTRAAAEKLDAETVQLYYQIALNGRRDLPYAPDEFSGFCMTLLRMLAFAPATD 371 Query: 365 LPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQG 424 P P P APVA P A AA LQ+ + Sbjct: 372 -PTPRSPGGGRAPVASADSTPAAAPLAAPAPA-------------RVPAAAPAPLQQPEA 417 Query: 425 ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPV 484 A + +EP AA A AA A A +W V Sbjct: 418 ARQVASAEPLAAEDADSPRAAAAPPDAPFVAAE--------------PAPAAQWDWLAVV 463 Query: 485 MQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAW 544 +L A V+Q ++ Sbjct: 464 ------------------------AGLRLGGMAKMLADHCELVAQTG----------DSV 489 Query: 545 KEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQ 604 A L + + ++K G +++T + A +TP + R Sbjct: 490 TLRVGEAHKHLLDRAYQDRLTGALREK--------YGPALQITFEVG-SAADQTPQQVRT 540 Query: 605 AIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 I E + A+A +I AD ++ L F +++ +I+P+ Sbjct: 541 RIKEARQAEAIAAIEADPFVRELVEQFGGQVEASTIQPL 579 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 174/598 (29%), Positives = 252/598 (42%), Gaps = 33/598 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R WRPQ F D+VGQ + AL N L GRI HAYLF+G RG GKTS AR+LAK Sbjct: 1 MAYVALYRTWRPQDFDDLVGQAPIKKALTNALETGRISHAYLFAGPRGTGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PC C NCREI +G D++EIDAAS +++ R L + V +AP R+ Sbjct: 61 ALNCEKGPTAHPCNQCSNCREITEGTCGDVVEIDAASNRGIDEIRKLREQVYFAPTSCRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM++ +FNALLKTLEEPPEHV F+LATT+PQK+ TILSRC +F + V Sbjct: 121 KVYIIDEVHMITTDAFNALLKTLEEPPEHVVFILATTEPQKILNTILSRCQRFDFRRATV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++I LE + HI EP AL+L+A A+G LRDALSL DQ V+ + V + Sbjct: 181 DEIAEHLEKVAKGSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMA-SPVTAETVRQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + ++ LV + + N + + + +G E E +L E+L + + Q Sbjct: 240 LGLVGREKLRELVTRIGQKNLSGALDALGQLLEQGKEMEQILAELLEYFRALLLYQADRE 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + E A + I + + +E Y+ +++ E+ L Sbjct: 300 YQEIYLTDTREALAETASLFTSSQIVASVERIHEAIRESKYSLRKKIVGELCLFDLCENR 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 A + + P V A+R Q Sbjct: 360 G-------NTEAALLARIDSLEQQVAALRQGNGTAPTFVTAVPAAPAAVQAVSASRPVPQ 412 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 AT + P T A ++ A Sbjct: 413 GPVPATPGPSAPPTGGTVRDAFARMAAAARQEISQEPPAPAPAEPAPVPAPAPLPEARPE 472 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 P E + A + W + L Sbjct: 473 AGPA------------------AAPEGEPQFDGSGRAQAQQLWQLVLQGLKQR-RKRTFL 513 Query: 541 LNAWKEE----SDNAVCLHLRSSQ--RHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + A D + L + S+ + + + + L G ++ L +V+ + Sbjct: 514 VYAEMARAADYQDQELLLGVSSAYGKEKMEEPAFRNLIQDILKGAVGQSIRLRVVQQE 571 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 166/504 (32%), Positives = 262/504 (51%), Gaps = 30/504 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQTFAD+VGQ+ + L N + RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQTFADLVGQDVIAQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLAK 60 Query: 61 GLNCET--GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + T +PCG C+ C I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLSYDHPTPSPCGTCNVCVGITKGSTLDVIEIDAASNTGVDNIRELIERSQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDEVHMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTDPQRVLATIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 +E + L HI EE I A+Q++A+ A+G LRDA SL DQ ++ G+++ + V Sbjct: 181 PLEAMVKHLHHIAIEEKIDITTEAIQMIAQIAQGGLRDAESLLDQ-LSLLAGEITVERVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++G + + + LVEA+ N +V+ + RG E +L + G + + + + Sbjct: 240 DLVGAVPERDLMVLVEAIAADNSIKVLKCTRQIMDRGKEPIIVLQNLAGFYRDLLIAKTA 299 Query: 299 PAA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P + L ++ + ++ I + L ++ R+ +E+TLL Sbjct: 300 PTSKNLVALTKPTWEKLCQFSQDWDIGTILAGQKHLQTSEVQIKNTTQPRLWLEVTLLGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L P+A+ Q+ Q Q +V TS+ L+ Sbjct: 360 L----------------------PSALPKFNQLEKQETRDISQNVSVKN---TSKNLSQP 394 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + + K + SEP ++ P+ + + S T+ + +LE K E+ Sbjct: 395 LTKKPISEKPKQQISEPKEVSKEVPIAPKSEDFFTSSTNDTAKKSSSDSLETDKIKNESE 454 Query: 477 RWKATTPVMQQKEVVATPKALKKA 500 V+ + + +T L + Sbjct: 455 LQNIWEKVLAEVKPHSTQALLSQQ 478 >UniRef50_A3NA70 DNA polymerase III, subunits gamma and tau n=16 Tax=Proteobacteria RepID=A3NA70_BURP6 Length = 826 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 220/490 (44%), Positives = 288/490 (58%), Gaps = 1/490 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ FA +VGQEHV+ AL + L GR+HHAYLF+GTRGVGKT+++R+ AK Sbjct: 1 MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETG+T+ PCGVC CREI++GRFVD +E+DAAS V++ LL+ YAP RF Sbjct: 61 ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF+LK + Sbjct: 121 KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL EE IA EP+AL+LLARAA+GS+RDALSLTDQAIA +V+ AVS M Sbjct: 181 GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD + L++A+ A+G +++A+ +E A R + + A L ++ LLHRIA Q +PA Sbjct: 241 LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ +R A + P +QLYYQ +GR EL APD G MTLLR LAF Sbjct: 301 SVLDEWPEA-ADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFE 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P SA + AAR + Sbjct: 360 PATTGGGAPAGGVPARVAGAAPKSGARAAAAVGASAVPAVTGATGAALAPKAAAARAATR 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + A +A + A+ +R + A + Sbjct: 420 AEAPPAAPARPAAAERGDDASDGDAPVPAKANARASADSRCDERDAQPPADSGSASGAAS 479 Query: 481 TTPVMQQKEV 490 + P E Sbjct: 480 SAPPDTAFES 489 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 81/283 (28%), Gaps = 6/283 (2%) Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 P V R + A A + + A A + +V Sbjct: 533 TPAAGAPVSRATGAAAALDVLRNAGMRVSSGRGAGAGAGAARPAAGPAASPTKPAPRAQV 592 Query: 423 QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 T ++ A + P + + Sbjct: 593 SVPTPRARAATGDVPPNGAARAEARSESRGAPPPWEDIPPDDYVPLSMDDGFIPPDDGFV 652 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD-PWAAQVSQLSLPKLVEQVAL 541 PV T L + +AI D W + L L + Q+A Sbjct: 653 PVFDSGPDDVRVAPKPAPAPPVDTRPLPEPIPLDAIGYDGEWPTLAASLPLKGVAYQLAF 712 Query: 542 NAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL 600 N+ + L + Q + KL AL+ G V++ + PA RT Sbjct: 713 NSELTAADGGTLKLAVPVPQ--YADAAQVAKLKAALADALGKPVDVAVEVG--PARRTAA 768 Query: 601 EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 A ++ +A + + AD ++ L R F A + E SIRP+ Sbjct: 769 ALAAAERAKRQREAEQEMSADPFVRQLLREFGASIVEGSIRPV 811 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 175/596 (29%), Positives = 256/596 (42%), Gaps = 37/596 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WR Q F D+VGQ+ V L N + + HAYLF+G RG GKTS A++ AK Sbjct: 1 MAYQALYRVWRSQRFEDIVGQKAVTQTLKNAIVSHKTSHAYLFTGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G D+IEIDAAS VE+ R + D YAP + + Sbjct: 61 AINCPNSKDGEPCNECEMCRSITAGTQEDVIEIDAASNNGVEEIRFIRDRANYAPTKAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEP E V F+LATT+P K+P TI+SR +F K ++ Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPKESVIFILATTEPHKIPATIISRTQRFDFKRINT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I LE IL E I +EP AL ++AR+AEG +RDALS+ DQAI+ +G ++ + Sbjct: 181 ADIVEHLEFILKESTINYEPAALNVIARSAEGGMRDALSILDQAISFSEGTITLDDAMQV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G+L D+ S + A V+ + +N+ A G E L +ML + M Q +P Sbjct: 241 TGSLTDEMMDSYLSACVKKEVPEALEALNQILAAGKESRRFLEDMLQYCRDLLMYQQAPN 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + I ELA+T+ + + L + E+ + + +E+ ++ Sbjct: 301 LVEEQSSTIRSTFTELAQTVSADQLFSMIKILSDTQNEIRFTNSAAIYLEVATVKLAQL- 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P A Q QQ E Sbjct: 360 ----------------PSASVPSAKMALADDQIVKQLQQEIKELRNEIKELRSNTGTVNT 403 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +VQ + + + R + R A+ Q + V L + + + KA Sbjct: 404 KVQPVQQTNHKKQTSTYRVPTERVYKVLREATRQHLNQVKEVWEDLLMSLSVTQRAMLKA 463 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAA--------------KLAAEAIERDPWAAQ 526 + PV + + + E I R+ W Sbjct: 464 SEPVAAGPTGLVIAFDYEIVCQRAANDEELQLSVHNNLSRMIKDYAPDPVYITRESWPEL 523 Query: 527 VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS 582 + L + E+ A N++ E L Q ++ L GS Sbjct: 524 -RKNYLTQAQEEGAENSFASEESEGEIELLPQEQ-----EVPEETLVVKAEEFFGS 573 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 245/527 (46%), Positives = 316/527 (59%), Gaps = 8/527 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP FA+VVGQ HVL AL N L R+HHAYLF+GTRGVGKTS+ARL AK Sbjct: 1 MSYQVLARKWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNCE GITATPCG C CREI +GRFVDLIE+DAASRTKV+DTR++LDNVQY P+RGRF Sbjct: 61 GLNCEQGITATPCGQCSACREIAEGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS+ SFNALLKTLEEPPEHVKFLLATTDPQKLPVT+LSRCLQF+LKAL Sbjct: 121 KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI+ QL +L+ E + + AL LLA+AA GS+RDALSLTDQAIA G G+V V M Sbjct: 181 PQIQAQLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLAQVQTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D Q L+L +A+ + + E ++ A G + + +L +L LLH+I++ Q +PA Sbjct: 241 LGAIDKGQILNLFDALCQGDIETLLTTARTAMGFGADADEVLRALLELLHQISLAQFAPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ + A+ + P +QLYYQ LL GRK+LPYAPD G+EM+LLRA+ F Sbjct: 301 TAS--ISDNGAAVLAWAQALKPEQVQLYYQILLSGRKDLPYAPDPASGLEMSLLRAVGFV 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQS--APQQAPTVPLPETTSQVLAARQQ 418 P P+ + A A V T+ PQ+ AP A P + A Sbjct: 359 PEKPVSRWQSGEGVSAAEALKLVAPSTEGKSAPQADTAPNHAVVTETPVAAAVPQAGIAS 418 Query: 419 LQRV---QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS-ALEKAPAKKE 474 ++ A + + + + + + +A ++ Sbjct: 419 TLVAGTHSPVRTTEEPAVKADSSVATEEAPSGDDDVHEAESDALFAEQNLLISQAESQGF 478 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD 521 + A + P + + +A ++ +ER Sbjct: 479 NPGYDAVNAGDNDLPLHDAPPLFDEMAYADYPQSYSADISETPVERG 525 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 87/288 (30%), Gaps = 7/288 (2%) Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + P+ E R + + V T A + T A Sbjct: 596 EAKKPVSSFERRRMAVQETSTVPVTTAPTDKGTQDEISLGAMSANTQTATLTQATASVSG 655 Query: 420 QRVQGATKAKKSEPAAATRARP-VNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 V E A AL+ + P A Sbjct: 656 ADVAADYDRPPWEDTATPDDSSKAPELALDYAVNRESAPVNAESPDKAHPEEYTSAAPHT 715 Query: 479 KATTPVMQQKEVVATPKALKKALEHEK------TPELAAKLAAEAIERDPWAAQVSQLSL 532 + P+ + + K E AA W + L + Sbjct: 716 QTPQPLKAESQTALQAKGQTHTDEVSSSDGVHCANHSAASPIGGDETDLRWYKLMGALEI 775 Query: 533 PKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 V Q+A+N+ N + L L+ Q+HL A +L EALS G E+ + + Sbjct: 776 GGRVRQLAVNSVCLAWSNPIPLVLKQDQKHLAAPVAIGQLNEALSKALGHEAEIALEVGE 835 Query: 593 NPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESI 640 P TPL+ R + E L+ AR ++ D + L + A D++SI Sbjct: 836 VPGRETPLDIRARFHRELLSDARGALNTDPAVLRLMQQAGAWFDDDSI 883 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 141/383 (36%), Positives = 213/383 (55%), Gaps = 10/383 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ+F DVVGQEHV L N +S G+ HAY+FSG RG GKTSIA++ AK Sbjct: 1 MNYQALYRMFRPQSFQDVVGQEHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C C+ I QG D+IEIDAAS V++ R++ D V+YAP+ ++ Sbjct: 61 AINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP H F+LATT+P K+P TI+SR +F KA+ Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAIGT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI +L + E+ + ++ AL+ +A+A+EG +RDALS+ DQAIA GD ++ Q + Sbjct: 181 EQITDRLRFVAEEQQLDYDNEALEFIAKASEGGMRDALSIMDQAIAFGDEHLTLQDALDV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++D+ L + +++ N + ++ + G E L+ +M+ + M + Sbjct: 241 TGSVDEAALNELFKDVIDGNVKNAFTRYHQFISEGKEVNRLINDMIYFVRDTIMNKTV-- 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 N+ A + M + + + ++ ++ + E+ L++ Sbjct: 299 ---NNHAEFDALM-----NFDLDMLYHMIDIINDTLVSIRFSVNQNVHFEVLLVKIAEMV 350 Query: 361 PRMPLPEPEVPRQSFAPVAPTAV 383 P V A V Sbjct: 351 KSQPDTVTNVATTQVASQPNNEV 373 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 227/533 (42%), Positives = 304/533 (57%), Gaps = 18/533 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F VVGQEHV+ AL NGL GR+HHA+LF+GTRGVGKT++AR+LAK Sbjct: 1 MSYQVLARKWRPRDFTQVVGQEHVVRALTNGLDKGRLHHAFLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+ G+ +TPCG C NC+ I+ G FVDLIE+DAASRT V+DTR+LL+NV YAP+RG + Sbjct: 61 SLNCKEGVRSTPCGKCQNCQAIDGGNFVDLIEVDAASRTGVDDTRELLENVHYAPSRGHY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHM S SFNALLKTLEEPP H+KFLLATT+P+KLPVT+LSRCLQF+L+ + Sbjct: 121 KVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPKKLPVTVLSRCLQFNLRRITP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + I L IL E I E AL L+ARAAEGS+RDALSL DQAI G GQV V M Sbjct: 181 KAIAEHLNSILEAEEIPSESYALTLIARAAEGSVRDALSLLDQAINYGRGQVMVADVRTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG+++ L++A++ NG+ ++ + E A ++ ++L ++L LL R+A+ QL+P Sbjct: 241 LGSIEQGDLFILLDALLAGNGQGLIEKVREICAYSVDISSILADLLHLLQRLALYQLAPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + LA P ++QL+YQ LIG ++L YAPD EM LLR L F Sbjct: 301 TVDDI--DERGIFSSLAARTTPEEVQLFYQIGLIGSRDLTYAPDHHTAFEMILLRMLCFR 358 Query: 361 PRM----------PLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 P P PE S P+A P Q + + Sbjct: 359 PADGASSCQALTNPKPEKTGLASSDPPLAQETTSPPLSGNDHWPGLVTQLKLTAIARQLA 418 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALE----RLASVTDRVQARPVPSAL 466 + A ++ + + A + RA ALE + R+ + + Sbjct: 419 ENCALERREEGIIYLQLAPSMANLHSKRAEERLQQALEEYYGEAIQLIIRIADSTLGTDT 478 Query: 467 EKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE 519 + K+E W+ ++ + A KAL + + L E Sbjct: 479 VASRRKQEDATWQ--QAAVESIQNDANIKALSETFNARLPLDSVRPLTKPKQE 529 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 2/165 (1%) Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 + + PK K L P + D W V+QL L + Q+A Sbjct: 359 PADGASSCQALTNPKPEKTGLASSDPPLAQETTSPPLSGNDHWPGLVTQLKLTAIARQLA 418 Query: 541 LNAWKEE-SDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP-AVRT 598 N E + + L L S +L+++ A+++L +AL G ++L I D+ T Sbjct: 419 ENCALERREEGIIYLQLAPSMANLHSKRAEERLQQALEEYYGEAIQLIIRIADSTLGTDT 478 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 R+ A ESI D NI+ L F+A L +S+RP+ Sbjct: 479 VASRRKQEDATWQQAAVESIQNDANIKALSETFNARLPLDSVRPL 523 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 154/456 (33%), Positives = 240/456 (52%), Gaps = 2/456 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+TF +++GQEH+ L N + GR+ HAY+F G RG GKT+ A++LAK Sbjct: 1 MTYLALYREWRPRTFGEIIGQEHITRTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC A PC C++CR + +G VD+IEIDAAS +++ RDL + +++APA GR+ Sbjct: 61 ALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 +VY+IDEVHML+ +FNALLKTLEEPP H +LATT+P ++P+TILSRC +F + + Sbjct: 121 RVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLTILSRCQRFDFRRIIP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ + + E AL+L+ARAAEG LRDALS+ DQA A G +V+ V + Sbjct: 181 ADIIKRLKEVAAGARLEVEEEALRLIARAAEGGLRDALSILDQAAAFGGMKVTEAGVHQI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ D + + R + L++E A G + E+ G L + + ++SP Sbjct: 241 LGTVRTDALDRMAGCLAAGEAGRALRLVSELAGEGKDLRLFARELAGYLRALLLEKISPG 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + RM A + + + +++ ++ + +E+ L++A Sbjct: 301 TPAGEAWGDTARMAAQAAEFSEAGLVRAVEIIARAEQDMKWSAMPGIVLELALVKACRPE 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 LP ++ P + P + A +A + P + V A L Sbjct: 361 AGWDLPSLAARVAGLEE--KIKLLAPAEAPVKRPPAAAKAASAPRQAAPAPVPVAVPALP 418 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDR 456 + Q PA A V A + + ++ Sbjct: 419 QKQVQEAGGPGGPAEAVSLEQVREAWEDLMNAMRKE 454 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 164/452 (36%), Positives = 234/452 (51%), Gaps = 11/452 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++ L R++RPQ F +VVGQEH+ L N + GR+HHAYL SG RG GKT++AR+LAK Sbjct: 1 MAHLALYREYRPQRFGEVVGQEHITRTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ CR I G +DLIEIDAAS +++ RDL D V +AP ++ Sbjct: 61 AVNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVELKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+ QKLP+TILSRC F + L Sbjct: 121 KVYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 ++I +L + ++ + P AL +AR A+G +RDALSL DQ +A +G+++ A Sbjct: 181 DEIVARLREVCGKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT DQ L+L ++ + + ++E G + L+ + L L + +V+L Sbjct: 241 VLGTAPLDQFLALDGHLLRGDVGAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEA 300 Query: 300 AALGNDMAAI-ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + A +MR A + + L EL +P R+ VE+ L+R Sbjct: 301 GAQVLGLPAEALEQMRARAEPFAERQLIRAIRLLGQAETELRLSPSPRLLVEVALIRLTG 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 E E + AP+ +PQ A Q T+ A Sbjct: 361 LFTGAAADEGEDDGTAAEAAAPSRRRRQEHGEVRPQGASQA---------TAPGPAGPGD 411 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERL 450 G S PA A E++ Sbjct: 412 PGEPAGGQATTPSAPAPVGAGVDRVVEAWEQV 443 >UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 Tax=Zymomonas mobilis RepID=C8WB95_ZYMMN Length = 628 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 193/647 (29%), Positives = 305/647 (47%), Gaps = 41/647 (6%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLARK+RPQ F+D++GQ+ ++ L N ++ R+ HA+L +G RGVGKTS ARL+AK L Sbjct: 11 YRVLARKYRPQKFSDLIGQDAMVRTLGNAIARDRLAHAFLLTGVRGVGKTSTARLIAKAL 70 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC G+T PCG C+ CR I +GR +D++E+DAAS T V+D RD++++V+YA Sbjct: 71 NCVGKDGHGGMTIDPCGECEACRAIAEGRHIDVVEMDAASHTGVDDIRDIVESVRYASVS 130 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 RFKVY+IDEVHMLS+ +FNALLKTLEEPP HVKFL ATT+ K+P+T+LSRC +F L+ Sbjct: 131 ARFKVYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEINKVPITVLSRCQRFDLRR 190 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 + + ++ E + E AL ++A+AAEGS+RD LS+ DQAIA G + V Sbjct: 191 ISTATLTDYFSKVVQLEQVEAEEEALAMIAKAAEGSVRDGLSILDQAIAHSSGSILAADV 250 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D SL+ ++E G+RV+ + G+E EALL +L L+H I ++ Sbjct: 251 REMLGLSDRGVIKSLLVDLLEGKGDRVLDHVKAQYDLGVEPEALLHGLLQLIHAITRSKM 310 Query: 298 S-PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L E+ + EL + + + +Q LL G E+ A EM LLR Sbjct: 311 GRPDNLTLHPTEEEIWLAELGKKLSFPVLHRLWQLLLKGHSEVQNAVLPLEAAEMALLRV 370 Query: 357 LAFHPRMPLPEPEVPR---QSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 + ++P P + + Q + + ++ P S + + + QV Sbjct: 371 IH-ASQLPDPATIIAQFKKQGSVSPSLSPSPEDNRLAPPTSSFQDREASDVKKNISEQVS 429 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 ++ Q + S+ T + ++ + + + + P + Sbjct: 430 PSQFQAKEALSKNGNDFSKSLQPTEKKYFSSFDDDNNSRMAASDYPVEGKQKFSELPENQ 489 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 P +A K E + + A L Sbjct: 490 PRPSAIPIAP-------------ASEAKLKNPHFPPDFKSLTEMLFDNGHALLGHSLEDY 536 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 E + + L + ++ +Q+L+ AL L ++ ++D Sbjct: 537 GR--------LIEYNPPRLLL---ENHSRISGET-RQELSLALKNLTKQAWQVEFLQDRK 584 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDEES 639 + +E +A I+ +Q + + F DAE + S Sbjct: 585 GQPS--FREAEIAQKEARQKA---ILNTPIVQAVLKTFPDAEWVQSS 626 >UniRef50_C8PYL7 DNA polymerase III subunit tau n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYL7_9GAMM Length = 697 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 209/513 (40%), Positives = 295/513 (57%), Gaps = 18/513 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQEHV AL N + R+HHAYLF+GTRGVGKT+IAR+LAK L Sbjct: 2 YQVLARKYRPKNFHELLGQEHVSKALINAIHNQRLHHAYLFTGTRGVGKTTIARILAKCL 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCETG+T+ PCGVC C+ I+ GRF+DLIEIDAASRTKVEDTR+LLDNV YAP +GR+KV Sbjct: 62 NCETGVTSEPCGVCGVCQSIDSGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 122 YLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPLPQVA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ILN+E I++E AL L+ +A+GS+RDALSLTDQAIA G+G V+ + + MLG Sbjct: 182 LAEYLGTILNKEQISYESDALWQLSSSAKGSVRDALSLTDQAIAFGNGNVTDEVIRQMLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D ++++ + + N +++ I + ++ +A+ + LH++A++Q P Sbjct: 242 LIDQADVIAILANIYQQNTQQLTQSIQLLREQVVDAKAVFDRLAETLHQLAILQALPNFD 301 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 ++++LA+ +P +QLYY ++ R+ L A +EM LLR +AF P Sbjct: 302 LQINRQQSEQLQQLAQKLPAELLQLYYDIVVKSRENLALANTPMQALEMCLLRLMAFKPL 361 Query: 363 MPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRV 422 ++ P P+ QS Q+P + +TT + + Sbjct: 362 H--------------RNQISLRPPIANNPESQSLDSQSPDFKIVDTTPSEAIQGAKSSVL 407 Query: 423 QGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATT 482 + SE +++ L + AS D +Q S + + Sbjct: 408 AEDSLQLTSE----QSDNNLSDDNLLKSASNVDSIQQIIEESIQQGTEQQAFDDSHLIAI 463 Query: 483 PVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 ++ + +L + Sbjct: 464 DEAAVNTPTQQTPTIEDDAVANRLSDLQPSDSH 496 >UniRef50_B8G7M2 DNA polymerase III, subunits gamma and tau n=3 Tax=Chloroflexus RepID=B8G7M2_CHLAD Length = 613 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 185/649 (28%), Positives = 291/649 (44%), Gaps = 47/649 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ Q L RKWR QTFA++VGQEHV+ L N ++ R+ HAYLF+G RGVGKT++ARLLAK Sbjct: 1 MAVQSLYRKWRSQTFAELVGQEHVVQTLRNAIAEDRVGHAYLFTGPRGVGKTTMARLLAK 60 Query: 61 GLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC +A PCG C+ C I +GR VD+IE+DAAS T VED R++++ VQ+ P+ R Sbjct: 61 AVNCLHPDPSARPCGTCEMCTAIAEGRAVDVIEMDAASHTSVEDAREIIERVQFRPSVAR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 KVY+IDE HMLS +FNALLKTLEEPP+H F+LATT+ K+P TILSRC +F Sbjct: 121 MKVYIIDEAHMLSTAAFNALLKTLEEPPDHALFILATTEVHKVPATILSRCQRFTFVRHS 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V + + I E I A + +ARAA GS+RDAL + +Q + +G ++ Q V + Sbjct: 181 VTSMAAHVRRIAAAEGIVLVEGAPEAIARAATGSMRDALGILEQLASFVEGPITLQHVQS 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG + +L+EA++ A+ + +N A +G + +++ L + ++ + Sbjct: 241 LLGMTAAAEVDALIEALLSADLTAALRAVNAVANQGADLRQFARDVVERLRAVMLLNATG 300 Query: 300 AALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 D+ E ++ + A+ + + + +L P + +E+ ++ AL Sbjct: 301 DRTLLDLGDDEVAQLMQWAQRAEMAALVQWVKLFSGLDYQLRTTPYGHLPLEVAVVEAL- 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + P PQ P+VP TTS Q Sbjct: 360 --------------------VAPVPVVQPVTPHPHAVRPQSRPSVPASPTTSSARPNIDQ 399 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 A PA + PV + S + + P E+ Sbjct: 400 SMAFTVA-------PALTQPSAPVKPSRATPPPSTEPPTSSPLPATPPVAPPTTPESGVA 452 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 P V A + + +++ A+L+ W + Q Sbjct: 453 PTADPPPPPPAVWAAVQQSRPPVDYPAARAADAELSLLERLEATWEDFKRDVRPRSPTVQ 512 Query: 539 VALNAWK--EESDNAVCLHLRSSQ--RHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNP 594 LN+ + + N + L + S+ L + + E L G T + ++ Sbjct: 513 ALLNSARPYDVEGNTIILLVTSTFHKERLEEPKNRAIIEEVLRRRFGKTYAVRCTIEEKS 572 Query: 595 AVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 P++ R I E + D ++ FDA + I P+ Sbjct: 573 TE--PIDLRAKIREAR---------KDELVRAALNIFDAHIV--GIEPL 608 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 174/639 (27%), Positives = 283/639 (44%), Gaps = 28/639 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ FAD+VGQEH+ L+ ++ G+I HAYLF+G RG GKTS A++LA+ Sbjct: 1 MAYVALYRRWRPERFADLVGQEHISRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPCG CD+CR I G +D+ EIDAAS +++ RDL ++V++AP G + Sbjct: 61 ALNCAEGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTEGLY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML+ +FNALLKTLEEPPE V F+LATT+P K+P TI SRC ++ + V Sbjct: 121 KIYIIDEVHMLTTEAFNALLKTLEEPPERVIFILATTEPHKVPATIQSRCQRYDFHRITV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +L ++ E I E AL ++A A+G +RDALS+ DQ A +G ++ + V Sbjct: 181 TEICDRLIYVCKESGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEGTLTAERVQEA 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + E + + ++ +++ G E +LVE+ + + + Sbjct: 241 LGLVGRAWIRQMAEQIAARDAAALITQLSQLLQNGRELRQVLVELAQYFRSLMIAGVGGT 300 Query: 301 ALGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 ++ A ++R A +I + L ++L +P R+ E L+ Sbjct: 301 ISAAELCAGDAEQLRADAAQFSEDEIMTILRRLNETMQDLRTSPQPRIAAETLLIELCHA 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P A A A + + + +A A +V P + + + Sbjct: 361 DGAAVSVGAAAPHPGSADAAHIARL---EAQVEELAARLAAGSVSAPISAAGGVPPAPTP 417 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + + A + AS +V A P L+ + R K Sbjct: 418 RPRTAKADST-----------TAPKTASKSAASSAAKVAADGAPRQLDMKVWQSFQVRLK 466 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 + A + + + + A+ R + ++ L+ L Sbjct: 467 ERNRLAASLLSGAAYEGMTETHFFIRPSSDMARDYIAKRHRAVFDEVMTALAGRPL---- 522 Query: 540 ALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTP 599 + + + + L E G+ I E +PA Sbjct: 523 ---SVVCTGGEEDAVPAPPIKASPDYPAPVAALLEVAGD--GA----RIEEVTSPAPPRA 573 Query: 600 LEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEE 638 E + A ++K A+ + + FD EL + Sbjct: 574 AEKKPAPPQQKQAEEDDCETYEPTPDEEAEMFDDELPPD 612 >UniRef50_C1ZCQ4 DNA polymerase III, subunit gamma/tau n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCQ4_PLALI Length = 682 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 173/598 (28%), Positives = 269/598 (44%), Gaps = 43/598 (7%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y VLAR++RPQTF++VVGQ+ + L N + GR+ HAYLF+G RGVGKTS+AR+ AK Sbjct: 5 NYTVLARRFRPQTFSEVVGQDRIAQTLRNAILEGRVAHAYLFTGARGVGKTSMARIFAKA 64 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC + A PC C+ CR + G+ VD+ EID AS ++D R L NV R R+K Sbjct: 65 LNCPNAVEAVPCNTCEICRAVSAGQDVDVSEIDGASNRGIDDIRTLRANVNVKSMRTRYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHML++ +FNALLKTLEEPP+ VKF+ TT+P KLP TILSRC +F +++E Sbjct: 125 VYIIDEVHMLTKEAFNALLKTLEEPPQGVKFIFCTTEPNKLPDTILSRCQRFDFGTVNIE 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 I +L I N E + A++L++R A GS+RD+ SL DQ +A G V+ V +L Sbjct: 185 SIGERLRQIANTEGFQVDDEAIELVSRRANGSMRDSQSLFDQVLAFGHQHVTVADVHRLL 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS--P 299 GT DD+ + LV+A+++ + R + +++A G++ +AL +++ L + + Sbjct: 245 GTASDDRVIELVQALIDRHAARALEALDQAILDGVQLDALTDQLISYLRDLMVTAAGVKG 304 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + R+ A I Q L + ++ A R E+ L+R Sbjct: 305 IALLGATESSRSRVETQAEAWGLKTISAALQILAEAKIKMARATWGRALTELALVRITLL 364 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 L E Q P ++ P +S + Sbjct: 365 EDLSRLDELIARFQG---------------KSIPATSSSGRLATDRPMNSSPRVLPP--- 406 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 P A + P + + S + A Sbjct: 407 -------------PVAIIQGSPESRDLPDVQESQPEFQSQTEPQHHQHATANTSNATVVP 453 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 ++ + A ++ +L PEL + EA + + L + Q Sbjct: 454 VSSDATVSVDSSAEASSISTSL---AEPELVFQPGNEATLLE--YLRTKNTDLTGIHLQR 508 Query: 540 ALNAWKEESDNAVCLHLRS----SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 A + + + + + Q+ L KL + L G+++ L Sbjct: 509 ATHCQIT-GPTQLEIVISANHRFEQQCLEQPNIVSKLEQQLRTATGTSIRLRFTTGSA 565 >UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 Tax=Lactobacillales RepID=A5VIC2_LACRD Length = 611 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 135/445 (30%), Positives = 224/445 (50%), Gaps = 1/445 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ F D+VGQ+ V L N + +I HAYLF+G RG GKTS A++ AK Sbjct: 1 MSYQALYRVWRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I G+ D+IEIDAAS VE+ RD+ D +YAP + + Sbjct: 61 AVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP +V F+LATT+P K+P+TI+SR +F + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E +++++IL+++ + ++ +AL ++A AAEG +RDALS+ DQ ++ D +V + Sbjct: 181 EDAFNRMKYILDQKKVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G++ + + G + + + G + + + +++ + I + Q SP+ Sbjct: 241 TGSVTKQLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPS 300 Query: 301 AL-GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + + E+ + + L ++E+ + + +E+ ++ Sbjct: 301 LISVESTGLKQEDFEEIVQLASSATLYRMIDELNNIQEEMRFTTHPDVYLEVLTIKLAQI 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P+ L A + Q Q Q +Q P+ + +Q Sbjct: 361 EPQKNLQSAPAVSADTNAEATKTIEKLQQEIQQLQQTVKQLQNTPVRASRPSPRQQNEQP 420 Query: 420 QRVQGATKAKKSEPAAATRARPVNN 444 + Q + ++ + Sbjct: 421 RVQQKKVQVNLNKIYPVLENATRQD 445 >UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Micrococcineae RepID=C7NGE4_KYTSD Length = 796 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 165/619 (26%), Positives = 272/619 (43%), Gaps = 30/619 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L R++RPQ F++VVGQEHV L L GR++HAYLFSG RG GKT+ AR+LA+ Sbjct: 1 MS-TALYRRYRPQNFSEVVGQEHVTGPLQQALRTGRVNHAYLFSGPRGCGKTTSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T +PCG CD+C+++ +G VD+IEIDAAS V+D RDL + + PA+ Sbjct: 60 CLNCEQGPTDSPCGECDSCQDLARGGAGSVDVIEIDAASHGGVDDARDLREKASFGPAQS 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HM++ FNALLK +EEPPEHV F+ ATT+P+K+ TI SR + + + Sbjct: 120 RYKVYIIDEAHMVTSAGFNALLKIVEEPPEHVLFIFATTEPEKVIGTIRSRTHHYPFRLV 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAV 237 ++ L + E I EP L + RA GS+RD++S+ DQ IA D ++ Sbjct: 180 PPAVLQEYLAQVCEREGITVEPGVLSYVVRAGGGSVRDSMSVLDQLIAGSDDAGITLAGT 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +A+LG D + +V+A +G + + G + + ++ + + +V Sbjct: 240 TALLGFTDSELLDGVVDAYAAGDGASLFTTVERVVESGQDPRRFVEDLSERMRDLILVNA 299 Query: 298 SPAALGNDMA----AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P + R+R A + P ++ L G E+ A R+ +E+ + Sbjct: 300 VPTGTEAVLPGVPSDQLDRLRVQASGLGPAELSRASDVLFHGLAEMTGATSPRLQLEIIM 359 Query: 354 LRALA--------FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPL 405 R L F R+ E + + A TA + ++ Sbjct: 360 ARLLLPRAAGEGGFAARLEKVERWMAFRGDASAGGTAGAQAGAPAQEAPASQGSPVAQSA 419 Query: 406 PETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSA 465 P + ++Q + + A + + + +P + A P P+A Sbjct: 420 PAVPAAAAPQQEQSRAQEPARRDQTPRDEQREQEQPARQDRTPQGEERAQEQPAAPQPAA 479 Query: 466 LEKAPAKKEAYR---------WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE 516 + P E A + + E + A Sbjct: 480 EQAPPVPDEPPADMWEAEEAAAAAGPDSAGDRTPEPGAPQQAQQAAPEGSSSPGAAPVPL 539 Query: 517 AIERDPWAAQVSQLS-LPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQ----QK 571 R W + +L + ++ + + + + ++ L L + + R ++ + Sbjct: 540 ETLRHEWPTVLDKLKDISRVTWALVSQSMQVQDLSSEGLTLATEVAPIAERFSRGENADR 599 Query: 572 LAEALSMLKGSTVELTIVE 590 +A A+ G + V Sbjct: 600 VAAAVQEALGFHPRVRCVV 618 >UniRef50_B4CYL6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL6_9BACT Length = 598 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 181/624 (29%), Positives = 277/624 (44%), Gaps = 39/624 (6%) Query: 21 QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCR 80 Q H++T L N ++ R+ AYLF G RG GKTS AR+ AK LNC T PCGVCD C+ Sbjct: 6 QAHIVTTLKNAIAQNRLAQAYLFVGPRGTGKTSTARIFAKALNCVHAPTTNPCGVCDMCK 65 Query: 81 EIEQGRFVDLIEIDAASRTKVEDTRDLL-DNVQYAPARGRFKVYLIDEVHMLSRHSFNAL 139 EI G ++++E DAAS T+V+ R+++ DNV+YAP RG +K+Y++DEVHMLS SFNAL Sbjct: 66 EIAAGNSLNVLEFDAASNTQVDKIREIIIDNVKYAPTRGNYKLYIVDEVHMLSNSSFNAL 125 Query: 140 LKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHE 199 LKTLEEPP HVKF+ ATTD QK+P TI+SRC +F L+ + +I L I +E I Sbjct: 126 LKTLEEPPPHVKFVFATTDVQKVPTTIISRCQRFDLRRIPTPEIAQHLLFIAGKEAIELT 185 Query: 200 PRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEA 259 P A + +AR AEG LRDA S+ DQ +A ++ Q V + G L E ++ Sbjct: 186 PTAAESIARGAEGGLRDAESMLDQLVAFCGDKIDEQNVLNIFGFTARQTVAELCEHLING 245 Query: 260 NGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDM-AAIELRMRELAR 318 + + I + + G + L+ +++ L + + Q +P L D+ A + A Sbjct: 246 HTGAALGAIQKQSDAGKDLSRLMADLIEHLRNLLVAQSAPETLHEDLSAEAIAELTAQAG 305 Query: 319 TIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPE-----PEVPRQ 373 I + + + +A +++M E+ +RA+ + L E + Sbjct: 306 RIAADKLLNLIEQFADAESRMKWAANKKMHFEIAAIRAVQTLGQASLTEVLDTLTAIRGG 365 Query: 374 SFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEP 433 P P + + P + + P P ++ +A V +A S P Sbjct: 366 GAMPERPVKKVEAPKTPVAAVAEKKTERPKPAPVSSPAPVAEPAAPVSVPAPAEAPASRP 425 Query: 434 AAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVAT 493 + + + ++ + AP + V + Sbjct: 426 SLSAFVAASIGGSEKKTPAA---------------APKPDPKVSAEPAHKVEAKPAATVA 470 Query: 494 PKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVC 553 P A + E P+L ++ + W V L + VAL ++ +D Sbjct: 471 PSANAQ----ELWPQLVTRVRKDRPLISDW---VESGQLTDVSSGVALLSFPPSAD---- 519 Query: 554 LHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQ 613 R + NNRG +KL L+ L G+ V L V R+ E Sbjct: 520 -LARDTCERPNNRGFLEKL---LTELTGAPVTLKTETRAGLVVEKLA--REEAKPEPKVD 573 Query: 614 ARESIIADNNIQTLRRFFDAELDE 637 E+ D IQ F AE+ Sbjct: 574 PMEAFKNDPLIQKALAEFKAEILP 597 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 160/447 (35%), Positives = 241/447 (53%), Gaps = 3/447 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R WRPQ DVVGQEH+ L N L ++ HAYLFSG RG GKTS A+++AK Sbjct: 1 MAYQALYRVWRPQVLKDVVGQEHITRTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C C I+ G VD+IEIDAAS V++ RD+ D V++AP+ + Sbjct: 61 AVNCEQAPVEEPCNTCSTCTGIQDGSIVDVIEIDAASNNGVDEIRDIRDKVKFAPSGASY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P+TI+SRC +F K + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPRHVIFILATTEPHKIPLTIISRCQRFDFKRITA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + ++E I+ + +A +P AL ++ARA+EG +RDALSL DQAI+ D V+ V ++ Sbjct: 181 HTMIKRMEEIIEDGDLAVDPDALSMIARASEGGMRDALSLLDQAISYADTSVTLDDVLSI 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D ++EA+++ + I+ + G + + + + L + MVQ +PA Sbjct: 241 IGAASQDLMYDVMEALLDQQVADGLTAIDRLMSDGKDPGRFMEDFIFLTRDLLMVQAAPA 300 Query: 301 ALGN-DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + D + R LA + + + L ++++ +A + +EM +++A Sbjct: 301 LDESGDRKLGDQRFEILASKASQSWLFALMEKLNHFQQQMKWASHPAVFLEMFVVQACQM 360 Query: 360 HPRMPLPE--PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 R P PE RQ + + ++ P AP P P + Q +Q Sbjct: 361 PSREPEKAGLPEEVRQQISTLEHKLADLERRLQQAPSQAPAGRPDQPASPSQPQAPVRKQ 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNN 444 GA++A + Sbjct: 421 PQAASTGASRANMQRVKGVLNEATKAH 447 >UniRef50_D0LUL1 DNA polymerase III, subunits gamma and tau n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUL1_HALO1 Length = 649 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 185/649 (28%), Positives = 275/649 (42%), Gaps = 28/649 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARK+RP TF++VVGQEHV LAN + R+HHA+LF G RGVGKT+ AR+L K Sbjct: 1 MSYVVLARKYRPNTFSEVVGQEHVTRTLANAFAKDRVHHAFLFCGPRGVGKTTAARILGK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G TA PCG C C I G VD E+D AS ++ R+L + V+Y PA R Sbjct: 61 ALNCERGPTAEPCGSCVACETITNGTAVDYFEMDGASNRGIDAIRELTEAVRYQPAVLRK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TILSRC ++ K + Sbjct: 121 KVYVIDEVHMLTTEAFNALLKTLEEPPPHVSFVLATTEPHKVPNTILSRCQRYDFKLVPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSA 239 ++ L I E I + A+ L+ R + GS+RD+LSL DQ I+ G + V+ Sbjct: 181 PKLIEHLRRIFAAEEIEVDSGAISLIVRESGGSVRDSLSLCDQVISYVGTSNIGESDVAE 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +LV A+ E + + + + A ARG++ L ++ L +A++Q++P Sbjct: 241 VLGVADRSLTRTLVSALAEGDAKSALEAVEAADARGVDEVQLARAIVRYLRDLAVMQVAP 300 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A L + +RE A + + + ++ +L R+ +++ L+ Sbjct: 301 EAEGLIDGSEEEAAELREHAGRLSRERVTQMFDRMVQACNDLADTQMPRLVLDLALIDVA 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 A P +PL + + + + P Sbjct: 361 ALEPVLPLGDLIDRLGALERRLGGGGGRGGPGGGGRGGPSRSPASAASPGGQRGNARNPG 420 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 + G + P A R Q P + P E + Sbjct: 421 AARMSAGDLDPELVPPPPPGVAVAPQQQQPPSQPPPPSRPQQPPARAQATPPPPPAEDF- 479 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK--L 535 + A P A A AA A E+ W + L L Sbjct: 480 ---------DRPPPAEPPAAPPAGRASAPAAAAAPNAGESDMMAAWEQMLPALGETHRSL 530 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLN----NRGAQQKLAEALSMLKGSTVELTIVE- 590 + N + L + + L G V+L + Sbjct: 531 AGFYEHAKILSAAANRIEAGFAPEMSALAELAMEPESMAAMRSFLHGYFGRPVDLAVRVL 590 Query: 591 --DDNPAVRTPLEW-----RQAIYEEKLAQARESIIADNNIQTLRRFFD 632 + ++P R+ E+K + E+ A + + F Sbjct: 591 SAAEAEKNQSPARSVFDLNRERAEEDKRQRELEA-RAHPIYKKVLSTFG 638 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 155/458 (33%), Positives = 233/458 (50%), Gaps = 12/458 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ F+D+VGQ + T L L RI AYLF G RG GKTS AR+LAK Sbjct: 1 MTYEPLHHKYRPQRFSDLVGQGAIATTLTQALLKERIAPAYLFCGPRGTGKTSSARILAK 60 Query: 61 GLNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC + T PCG C+ CR++ G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLRSSKPTPDPCGQCEVCRQVANGTSLDVIEIDAASHTGVDNIRELIEKAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSVSAFNALLKTLEEPPPQVVFILATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + ++ L++I ++E I EP AL L+A+ ++G LRDA SL DQ +++ + V Sbjct: 181 PLGEMVAHLQNIADKEQIDIEPEALTLVAQLSQGGLRDAESLLDQLSLY-PERITVEQVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 + G + + L+ A+ + V+ + RG + +L + L + + + Sbjct: 240 QLTGAVPEQDLRQLLGAIARRDAVSVLEHTRQLLERGRDPLTILQNLASLYRDLLLAKTV 299 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L A + LA +I + L ++ + R+ +E+++L Sbjct: 300 PQRRDLVALTAETWQALIALAEAWSVEEILHAQEHLRTCEGQIKQSNQPRLWLEISILGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + P P +P P T T +V A P PLP+ S + Sbjct: 360 MTERVAQPPPPAVMPAARPQPTTMTPPRTEAEV------AVAAKPAEPLPQ-DSALSVNH 412 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVT 454 +Q A P V AL+ L + Sbjct: 413 PHIQATAAAAPEPALFPEPVANPEQVWQQALQVLQQMQ 450 Score = 55.4 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 106/362 (29%), Gaps = 29/362 (8%) Query: 253 VEAMVEANG----ERVMALINEAAARGI-EWEALLVEMLGLLHRIAMVQLSPAALGNDMA 307 ++ + + + L+ + + G+ + E+LL ++ RI + Q+ Sbjct: 189 LQNIADKEQIDIEPEALTLVAQLSQGGLRDAESLLDQLSLYPERITVEQVWQLTGAVPEQ 248 Query: 308 AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR-ALAFHPRMPLP 366 + + +AR + ++ Q L GR D +T+L+ + + + L Sbjct: 249 DLRQLLGAIARRDAVSVLEHTRQLLERGR-------DP-----LTILQNLASLYRDLLLA 296 Query: 367 EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGAT 426 + R+ + + L Q+ + Q ++ + Sbjct: 297 KTVPQRRDLVALTAETWQALIALAEAWSVEEILHAQEHLRTCEGQIKQSNQPRLWLEISI 356 Query: 427 KAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQ 486 +E A V AA + ++T V A + A + P +Q Sbjct: 357 LGLMTERVAQPPPPAVMPAARPQPTTMTPPRTEAEVAVAAKPAEPLPQDSALSVNHPHIQ 416 Query: 487 QKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKE 546 A AL L + Q+ + + Sbjct: 417 ATAAAAPEPALFPEPVANPEQVWQQAL-----------QVLQQMQMSTYALLSQHAHLRH 465 Query: 547 ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAI 606 D V + + + + K+ A S + G ++ + PA TP + Sbjct: 466 LGDREVRIGIVNQTLLNLTKNNHAKIEAAFSQVLGRPTKVALEVAPLPAKTTPTPKAKEP 525 Query: 607 YE 608 + Sbjct: 526 PQ 527 >UniRef50_Q1QAW7 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QAW7_PSYCK Length = 685 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 208/432 (48%), Positives = 278/432 (64%), Gaps = 2/432 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQVLARK+RP+ F +++GQ HV AL N + R+HHAYLF+GTRGVGKT+IAR+L+K L Sbjct: 5 YQVLARKYRPKNFHELIGQTHVSQALINAIDYNRLHHAYLFTGTRGVGKTTIARILSKCL 64 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC+TGIT+TPCGVCDNC I+QGRF+DLIEIDAASRTKVEDTR+LLDNV YAP++GR+KV Sbjct: 65 NCDTGITSTPCGVCDNCVAIDQGRFIDLIEIDAASRTKVEDTRELLDNVPYAPSQGRYKV 124 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+TI+SRCLQF L+ L Sbjct: 125 YLIDEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPITIISRCLQFVLRPLSQSL 184 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L ++L +E + + AL LA AA+GS+RDALSLTDQAIA G G + V++MLG Sbjct: 185 LSEHLANVLTQEQVGYTQPALWQLASAAKGSVRDALSLTDQAIAFGQGALDDVTVNSMLG 244 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 +D +SL+ + + V A I + A+ ++ ++ + LLH++A+ QL P Sbjct: 245 LIDAADLVSLITDIYNHDKPAVAAHIEQMRAQMVDASSMFDGLAELLHQLALCQLLPEVA 304 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPR 362 N A + +LA+ + P +QLYY+ ++ R+ + A +EM +LR LAF P Sbjct: 305 LNVNEAQAQHIDQLAQHMSPDVLQLYYEIVVQAREGVKLASTPMQALEMCILRLLAFRPL 364 Query: 363 MPLP--EPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + A PT ++ + +P S+ + T + + Q Sbjct: 365 PVDEILANVLDSTVMAIEKPTTTVSSATLITEPVSSSLELQTQSDNIVYENIDTSVNDKQ 424 Query: 421 RVQGATKAKKSE 432 V + E Sbjct: 425 DVGADNSITQHE 436 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 272/551 (49%), Positives = 342/551 (62%), Gaps = 12/551 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP TF VVGQ HVLTAL N L GR+HHAYL SGTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GI++ PCGVCD CREI+QG FVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF Sbjct: 61 SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLP+TILSRCLQFHLK+LD Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI QLE +L++E EPRAL LA+AA+GS+RDALSLTDQA+A G+G V ++V AM Sbjct: 181 TQIAKQLECVLDQEAQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRLESVLAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD L+EA++ + MA I E A G +++ L E+ GLLHR+AM QL PA Sbjct: 241 LGTLDHRHLHQLLEAILRQDAAATMAKITEIATLGPDFDQLHAELEGLLHRVAMAQLLPA 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + A + +LA+ + P ++QL YQ +L GRK+LP+APD R +EMT LR LAF Sbjct: 301 TVQEQGADA-ESLLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTSLEMTCLRMLAFS 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 PR E + V P ++ V P + A + P T A Sbjct: 360 PR-----REAVHPANLTVLPPSMAGGMGVAPAQLGKSRGADSAPTLATAIVAPPAAPGSV 414 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALE---KAPAKKEAYR 477 V+ A A A + L++ Q + A + +A +A Sbjct: 415 SVEHTATQMVPLVAHAVLETDEQEMASDALSAPLFVEQDELLREAQQMGYEAQPVMDAPS 474 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA-IERDPWAAQVSQLSLPKLV 536 +T V + + P + A E+ E+ A++ AE+ +E + + S + Sbjct: 475 APISTVVAADEAMQHLPSDMAVA--AEQPTEVPAEIVAESVVEPEAAPSAASSMQSLLGK 532 Query: 537 EQVALNAWKEE 547 + + + E Sbjct: 533 RNLLRSRLRSE 543 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 4/244 (1%) Query: 402 TVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARP 461 + + A V +A ++ R P + + + R Q Sbjct: 622 SAASASMANVAQTAASGASAVPAYGQAAPAQAPTRARPNPDDLPPWDLDGTPAARAQ--V 679 Query: 462 VPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER- 520 P+ AP +A P++ L+ + E+ E+A + + + Sbjct: 680 APAVSSAAPVMPQAVATSEPAPMVDSVMETIDWDELESDNQPEEGEEVARLIPSSLLVNC 739 Query: 521 -DPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSML 579 DPWA +++ + + Q+A+N+ + V L L+ QRHL + A+ LAE + Sbjct: 740 DDPWAELIARTGVGGRLRQLAINSVMTRQGDKVLLTLKPEQRHLVSDRARVDLAEIIGPE 799 Query: 580 KGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEES 639 G V++ + P TPLE +Y Q + D N+Q LR+ F A L +ES Sbjct: 800 LGQAVQVEVTLGTVPDQETPLEIEHRLYLGVREQVSRDLEQDPNVQFLRQRFGAVLHQES 859 Query: 640 IRPI 643 I P+ Sbjct: 860 IEPL 863 >UniRef50_B8DQU3 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfovibrio RepID=B8DQU3_DESVM Length = 688 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 180/702 (25%), Positives = 277/702 (39%), Gaps = 79/702 (11%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RPQTFA+V GQE V L+ + R+ AYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE T PC C+ CR++ G VD++EID AS +ED R L + + YAP GR+ Sbjct: 61 ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HML+R +FNALLKTLEEPP V F+LATT+P K PVTI+SRC F K L Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L E +P A++L+AR A GS+RD++SL Q +A G +++ + + Sbjct: 181 NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +++A+ + V A++ + +G++ L E+ + M++ + Sbjct: 241 LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE 300 Query: 301 A---LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPD------------- 344 A + + E A T I +Q L G++ + + + Sbjct: 301 AALPALDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLNLA 360 Query: 345 --RRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVA-------------------PTAV 383 R+ ++L + P +P P Sbjct: 361 MLPRL---VSLEQLSRGGGAGPAGGRGMPGGVGGVGGGPAGGSGMPGGGAGGHGSMPPRQ 417 Query: 384 MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKS------------ 431 Q + Q ++ A+ R G + + Sbjct: 418 GGYGGYGAQSGQSGQPGQFGQSGQSGESFPQAQPPQGRYPGPGQVRPQAASSASSMSSSS 477 Query: 432 ----EPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQ 487 P A+ + P + Sbjct: 478 GVPGAPGMQPAGGFPRPERAAPAAAPAPSRGGSDTSLPWDDVPYPAPGGAAFGDAAIGGT 537 Query: 488 KEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS----QLSLPKLVEQVALNA 543 V P ++ A + T L A A E W V + + A Sbjct: 538 SSVPGAPDSVASASDTPDT--LGAPDAPAPHEDGTWVGFVQYCVERNGEGGSSLSMLRQA 595 Query: 544 WKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLE 601 +D + + RSS L+ G + L G+ V + + ++TP E Sbjct: 596 QGHCADGRLTVSTRSSTLYNQLSVPGNEALLVARARAYFGTDVRVEV-LPPTTRIKTPSE 654 Query: 602 WRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 R + LR F A + S RP+ Sbjct: 655 LRAEA------------ERHPAVSLLREQFGATML--SCRPL 682 >UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Bacteroidales RepID=A6LDQ5_PARD8 Length = 586 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 157/643 (24%), Positives = 273/643 (42%), Gaps = 67/643 (10%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V ARK+RP TF VVGQ+ + T L N + ++ HAYLF G RGVGKTS AR+ AK Sbjct: 3 NYIVSARKYRPSTFRSVVGQKSLTTTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIFAKT 62 Query: 62 LNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC C C++CR + R ++ E+DAAS V+D R L+D V+ P G++ Sbjct: 63 INCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPPIGKY 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDEVHML+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC + + + Sbjct: 123 KVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTEKHKVLPTILSRCQIYDFSRISI 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + L+++ ++E + EP AL ++A+ A+G +RDALS+ DQ ++ +G ++ QAV Sbjct: 183 ADMVEHLQYVSSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFTNGNITYQAVIDN 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 L LD + L +A++ N + ++NE +G + + ++ + G + + + Sbjct: 243 LNVLDYEYYFRLTDAILSGNVRASLLILNEILGKGFDGQNIITGLAGHFRDLLVCRDEST 302 Query: 301 ALG-NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + A+I R +E+A+ P + + + ++R+ +E+TL++ Sbjct: 303 LVLFEVGASIRERYKEMAKHCPDQLLFKAIELANTCDLNYRASRNKRLLLELTLIQLCQL 362 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + + + A P++ + P QP AP P+ S + Sbjct: 363 TQVAVDDKKKALIEPIAGTNPSSQAVNSGQPQQPPQAPSVTAAAGAPQVMSTHM------ 416 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 ++ ++ + + P + E + + Sbjct: 417 ----------------------PSSVPAPPPSTAPNPARKTARPMGISMKEIGVEKPKQQ 454 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQV 539 + V TP W + + ++ Sbjct: 455 TVQQATTNVKEVVTP-------------------FDNDSLVREWDNYAATIDKKVYLKNT 495 Query: 540 ALNAWKEESDN---AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGS---TVELTIVEDDN 593 +N +N V +H Q L N + L + + + IVE + Sbjct: 496 MINCKPTLQENYYFEVAVHNPGQQEELINNAI--HILPFLRQHLNNSRIQMRVRIVEGNE 553 Query: 594 PAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + + + + + + LR F+ LD Sbjct: 554 ----------KHLAYTSTEKLELLMKINPTLGRLRDEFNLTLD 586 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 156/592 (26%), Positives = 271/592 (45%), Gaps = 22/592 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY+ L R +RPQTF +V GQEH++T L N + RI HAYLF+G RG GKT++A+LLAK Sbjct: 1 MSYKALYRSYRPQTFGEVAGQEHIVTTLKNAIKENRISHAYLFAGPRGTGKTTVAKLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C NC+ I G D+IEIDAAS V++ RDL+D V+YAP G++ Sbjct: 61 ALNC--TGENPPCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGKY 118 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKTLEEPP H+ F+LATT+P K+ TI+SRC +F K ++ Sbjct: 119 KVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTEPHKILPTIISRCQRFDFKKVEN 178 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +LE++L E+ +E AL+ +A+ AEG +RDALS+ +Q +A + +++ ++V+ + Sbjct: 179 HDIISRLEYVLKSENKKYELSALESVAKLAEGGMRDALSILEQCLAY-NNELTVESVNMV 237 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G L D +S ++ ++ + + V+ ++ + I+ + L +++ +L I + + + Sbjct: 238 YGLLSMDNKISFIKQLLSKDIKGVLTSLDNMLSGSIDIKRLTFDLVDVLKDIIIYKNT-Q 296 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + + LA I + L+ + D E+ +L+ Sbjct: 297 DVSILFVLTQQDVDNLAPYILVEEAFEIIDILIEASSHYSQSLDANTYFELAMLKICN-- 354 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQS-APQQAPTVPLPETTSQVLAARQQL 419 + +A QV P + P V ++ + + + + Sbjct: 355 ----------RIKEENKLAIDNSKAIEQVNILPVKDTAKAIPVVEETDSLPEEVIEDEII 404 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 + + + + A + +V A + Sbjct: 405 EEELNKGVIEYDPEIEESIPEELKAKADDITETVVPEEVAEGTLETVISNSDVSLPVGED 464 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS---QLSLPKLV 536 + + + V +P+ ++ + + A ++ W L+ K Sbjct: 465 ISQEIDENIIVNKSPENIEVSFSDILNILVQADRRVLNDIKEKWTVIARYRFNLNTAKFA 524 Query: 537 EQVALNAWKEESDNAVCLHLR--SSQRHLNNRGAQQKLAEALSMLKGSTVEL 586 + + + + + +N +L L + G + Sbjct: 525 SMLCDGKPVAAAPGGIIVAFEHQPNVNEVNETQNYYQLKNFLKEVLGENYDF 576 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 1/358 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP +F D+VGQ V L++ +S GRI HAYLFSG RG GKTS A++LAK Sbjct: 28 MAYIALYRQWRPGSFKDLVGQTAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAKILAK 87 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVC NC +I G +D+ EIDAAS +++ RDL + V++ PA GR+ Sbjct: 88 SLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREKVKFTPAEGRY 147 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP HV F+LATT+P K+P TI SRC +F + + V Sbjct: 148 KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHKVPATIQSRCQRFDFRRITV 207 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I +L ++ E I E AL+L+AR A+G +RDALSL DQ + ++ V Sbjct: 208 EEIEARLAYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQCASLDGDTLTAACVEEN 267 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + L +A+ E V+ I E A G + LL E+ L + + + + A Sbjct: 268 LGLIGHEPIYRLTKAIGERAKGEVLETIAELLALGKDPMQLLAELTIHLRSLMIYEAAGA 327 Query: 301 ALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 ++A + E I L EL + P R+ +E+ LL Sbjct: 328 LAALNLADDTGAALEEQKALFTQAQIMAMIARLHEAMAELRWTPQPRITLEVALLSLC 385 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 142/448 (31%), Positives = 215/448 (47%), Gaps = 3/448 (0%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 ++ V ARK+RP TF VVGQ H+ T L N + ++ A+LF G RGVGKT+ AR+LAK Sbjct: 3 NFVVSARKYRPATFDTVVGQSHITTTLKNAIKSNQLAQAFLFCGPRGVGKTTCARILAKT 62 Query: 62 LNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC T CG C++C + +++ E+DAAS V+D R+L+D V+Y P G+ Sbjct: 63 INCLTPTEDFEACGTCESCVSFQNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQSGKR 122 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNA LKTLEEPPE+V F+LATT+ K+ TILSRC F K ++V Sbjct: 123 KVYIIDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTEKHKIIPTILSRCQIFDFKRIEV 182 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 + + L +I +E I E AL L+A+ A+G LRDALSL D D ++ Q+V Sbjct: 183 KDMSGHLANIAQKEEIEAEQDALDLIAQKADGGLRDALSLFDLITTFSADRHITYQSVVK 242 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 L LD D + +A++ + V+ +E +G + + + L + M + Sbjct: 243 NLHILDHDYYFKITDALLAQDMPLVLLYFDEILRKGFDGHIFIAGLGAHLRNVMMCKDPA 302 Query: 300 A-ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L ++ R E A+ + + + + R VE+ L++ Sbjct: 303 TVKLLEVSEKVKQRFAEQAQNASASFLLSALNLANDCDLHYKSSKNPRFFVELVLMKMAN 362 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + + + V P P T V Q S QQ P + + Sbjct: 363 LNRVIDWAQNPVEIAGQPPADPEKKKPETNVAEQNNSHQQQQAPPPAKMSLEYTKKENPK 422 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAA 446 + + + +N Sbjct: 423 TPVIPNKPDVTLKVDTSNGSVQASDNTP 450 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 180/594 (30%), Positives = 268/594 (45%), Gaps = 39/594 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L RKWRP TF +++GQ+H+ + R+ HAYLFSG RG GKTS+AR+LAK Sbjct: 1 MAYLSLYRKWRPSTFKEIIGQKHISIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C NC+ I G +D+ EID AS V++ R L ++V+ P G Sbjct: 61 AVNCLDLKNGNPCNECANCKSINTGASMDVYEIDGASARGVDEIRVLRESVRTLPVAGNK 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML++ +FNALLKTLEEPP HV F+LATT+P K+P+TILSRC ++ + V Sbjct: 121 KVYIIDEVHMLTKEAFNALLKTLEEPPAHVLFILATTEPAKIPLTILSRCQRYEFHRISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI-ASGDGQVSTQAVSA 239 I+ L HI E H++ P A L+A AEG LRDALSL DQ AS ++S + V Sbjct: 181 NDIKEHLLHISQESHLSLTPEAAALIAVRAEGGLRDALSLLDQCSGASAGNELSAEIVYD 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D +Q + L +V + L + G E A+L ++L I + +++P Sbjct: 241 LLGLTDKEQIIDLFHMIVCGKSSATLQLFYKILQDGKEPSAILSDLLEHFRSIMICKVNP 300 Query: 300 AAL-GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 A + +++ A+ + + + +L E + RM EM LLR Sbjct: 301 NAPELSAYGNKISVIQKDAQELSDAYLDALFDSLHHSFSEANRSSSPRMSAEMGLLRLCR 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 L E + +V+ + PQ ++ P LP T S L Sbjct: 361 LRGSQALDSLEERITALE--KNVSVLMKSSTLPQTETIPAAPSPAILPPTISIPLVTPTA 418 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 L A+ + D + P +K P K E Sbjct: 419 LTPAPAAS-----------------------TTTCPDSPKEVVPPPPADKTPVKMEPAT- 454 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL--- 535 + + PK + + E + E+ L + D WA ++ + Sbjct: 455 ------KSKPSLPCKPKKSPEEKKAETSHEIGETLLDPSTYNDIWAKVLAFFEINHRIDI 508 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHL--NNRGAQQKLAEALSMLKGSTVELT 587 + + ++ S + L NN+G Q + +A G VE Sbjct: 509 LYCLQKSSLILLSKSRAIAVASQPYLVLAGNNKGYQNTIKDAFINAIGIPVEFH 562 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 231/561 (41%), Positives = 309/561 (55%), Gaps = 6/561 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ FAD+VGQEHV+ AL+N L+ R+HHAYL +GTRGVGKT+IAR+LAK Sbjct: 1 MSYQVLARKWRPRRFADLVGQEHVVRALSNALAGQRLHHAYLLTGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G+ A PCG C CR+I+ GRFVDL+EIDAAS T +++ R++++N QYAP GR+ Sbjct: 61 SLNCERGVGAEPCGECAACRQIDAGRFVDLLEIDAASNTGIDNIREVIENAQYAPTAGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNA+LKTLEEPP HVKF+LATTDPQK+PVT+LSRCLQF L+ + Sbjct: 121 KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFALRNMTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ L H+L E I E AL LLARAA GS+RDALSL DQAIA G+G V V AM Sbjct: 181 QQVSGHLAHVLATEGIEFESPALALLARAASGSMRDALSLLDQAIAYGEGVVREDGVRAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +D +L+ A+ + +G V+ E AARGI ++A L E+ L ++IA++Q P Sbjct: 241 LGAVDRRYLFTLLAALADGDGAAVLDEARELAARGIGFDAALEELAQLFYQIALMQAVPQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ +D + LA ++ P D+QLYYQ + G ++LP APD ++G M LLR LAFH Sbjct: 301 AIADDEPE-REALAALAGSMAPEDVQLYYQMAVQGGRDLPLAPDEQLGFNMALLRMLAFH 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ P P +A +AP T + S AAR + Sbjct: 360 PQTGSPALAAPAAVAGGIASPPQAPAGMTAGARPAAPAGTATDDDDDPASGRGAARAAIA 419 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + ++ A A + S P + + A Sbjct: 420 KALRRSPVERPVVATRQAV-----PADTPVESGLPATTGTSRPGDTGQPASVPAGTTAPA 474 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 P + P + P A A P Sbjct: 475 PVPASASGLDSSLPWDDEVHDSLSAAPVEAVPAAGLGQASLPHEDAYDCPEREPAASTPE 534 Query: 541 LNAWKEESDNAVCLHLRSSQR 561 + A + AV L ++ Sbjct: 535 VPAGASPAGEAVRLASGPAEA 555 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 90/250 (36%), Gaps = 10/250 (4%) Query: 397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDR 456 P++ P PE + A + ++ G A + + A+ D Sbjct: 524 PEREPAASTPEVPAGASPAGEAVRLASG------PAEALPWDDETAHGLNADEQAAHDDM 577 Query: 457 VQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE 516 A P+++ + + + TP + P A+ E + + +A Sbjct: 578 FGAPAEPASVPVSSSGQAVTTAPDVTPPADVRAPDVMPDAVAVPAESAEALAASGPVATG 637 Query: 517 AIERDPWAAQVSQLS--LPKLVEQVALNAWKEESDNAVC-LHLRSSQRHLNNRGAQQKLA 573 W A V L L +A NA + + L L + R + + LA Sbjct: 638 TGLTGDWIALVDTLKDSLGAKARLLAQNAELVAREGELVRLRLPGAHRFVAGADYRSALA 697 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDA 633 +AL+ G V + + D T L R + EKL AR +I D + L+R F A Sbjct: 698 DALATHWGQPVRIEVEIGDV-VGETHLMQRARVQGEKLELARSAIEQDPRVAELKREFGA 756 Query: 634 ELDEESIRPI 643 + ESI+P+ Sbjct: 757 VVVPESIQPL 766 >UniRef50_B6J935 DNA polymerase III subunit gamma/tau n=6 Tax=Coxiella burnetii RepID=B6J935_COXB1 Length = 509 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 229/505 (45%), Positives = 312/505 (61%), Gaps = 4/505 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M++QVLARKWRP+ F +V+GQ V+ AL+N L +HHAYLF+GTRGVGKT+I+R+LAK Sbjct: 1 MAHQVLARKWRPRCFQEVIGQAPVVRALSNALDQQYLHHAYLFTGTRGVGKTTISRILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G++A PC C+NCREI++GRF DL E+DAASRTKVEDTR+LLDN+ YAP +GRF Sbjct: 61 CLNCEKGVSANPCNDCENCREIDEGRFPDLFEVDAASRTKVEDTRELLDNIPYAPTKGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKF+LATTD KLPVT+LSRCLQFHL L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPSHVKFILATTDHHKLPVTVLSRCLQFHLAQLPP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +H+L EE++ E AL LLARAA GS+RDALSL DQ+IA G+G+V V M Sbjct: 181 LQIAAHCQHLLKEENVEFENAALDLLARAANGSVRDALSLLDQSIAYGNGKVLIADVKTM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT++ ++EA+ G+R++ + +G+++ L ++L LLH+IA++Q P Sbjct: 241 LGTIEPLLLFDILEALAAKAGDRLLGCVTRLVEQGVDFSNALADLLSLLHQIAIIQTVPE 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 AL + + ++R+LA+ + D+QL+YQ LIG+++L Y+P + G EMTLLR LAF+ Sbjct: 301 ALIENDS---EQLRQLAKLLDREDVQLFYQIGLIGQRDLAYSPTPQTGFEMTLLRMLAFY 357 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P PE + A V PT + T P T+ L + S +L Sbjct: 358 PSAANAIPETESKE-AVVTPTPKSSETSWPQLLSQLKLTGATLALAQQCSLKELTDNRLY 416 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + + R V + R +V + + A K + + +A Sbjct: 417 LMLNPKQKPLLQQKHIERISEVLSEHFNRTITVKIDISNHQTETPAALAQKKAQDRQTEA 476 Query: 481 TTPVMQQKEVVATPKALKKALEHEK 505 +M ++V + L E Sbjct: 477 EKRMMNDRQVQRIMQTFDATLVKES 501 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 4/150 (2%) Query: 494 PKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAV 552 P A E E + + W +SQL L +A KE +DN + Sbjct: 358 PSAANAIPETESKEAVVTPTPKSSET--SWPQLLSQLKLTGATLALAQQCSLKELTDNRL 415 Query: 553 CLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLA 612 L L Q+ L + ++++E LS T+ + I N TP Q +++ Sbjct: 416 YLMLNPKQKPLLQQKHIERISEVLSEHFNRTITVKIDIS-NHQTETPAALAQKKAQDRQT 474 Query: 613 QARESIIADNNIQTLRRFFDAELDEESIRP 642 +A + ++ D +Q + + FDA L +ESI P Sbjct: 475 EAEKRMMNDRQVQRIMQTFDATLVKESIVP 504 >UniRef50_A8PNF7 DNA polymerase III subunit tau n=1 Tax=Rickettsiella grylli RepID=A8PNF7_9COXI Length = 523 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 211/531 (39%), Positives = 303/531 (57%), Gaps = 18/531 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARK+RPQ+F +++GQE L N L RIHHAYLF+GTRGVGKT++ARLLAK Sbjct: 1 MSYQVLARKYRPQSFDELIGQESTCRILKNALRTQRIHHAYLFTGTRGVGKTTLARLLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC+T IT PC C +C+ I RF DLIE+DAASRTKVEDTRDLL +V Y P++GR+ Sbjct: 61 CLNCQTQITPEPCNQCISCQAIHANRFTDLIEVDAASRTKVEDTRDLLADVHYTPSQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP HV FLLATTD Q+LP TILSRCLQFHLK + Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPPHVIFLLATTDTQRLPATILSRCLQFHLKTITT 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 QI +QL +IL +E I EP AL LA+AA+GSLRDALSL DQAIA + ++ Q ++ + Sbjct: 181 VQISNQLANILKKEKIPFEPEALAPLAQAAQGSLRDALSLLDQAIAYTNQNLTKQDINTL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + + L++A++ + ++ +L+ + + G+++ ++ E+L LH++A+ Q Sbjct: 241 LGHVAHSEIIQLLDALILEDTAKLWSLVEQFSELGVDFSCVMDELLTCLHQMALSQRFKT 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + + A+T+ P IQLYYQ +L R+++ AP R+G EM LLR LAF Sbjct: 301 EVN-----YTQTIIDFAQTLSPEAIQLYYQIVLFSRRDITLAPTPRLGFEMMLLRLLAFK 355 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P E + P + P+ Q + + L + Sbjct: 356 PAGDDSE----------INPIKLTQTRTPAPEKQPIATHKTDKTILPNNEKDLHWPTLIA 405 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +++ A ++ N+ +L + A A E ++ Sbjct: 406 QLKLTGLTHALAQQCALQSYHNNHVSLCLDPRQAALRS---AKQETKLAHALSEYFKKPI 462 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 T + ++TP L++ + ++ + L + + ++L Sbjct: 463 TLSIGVGDTSLSTPARLEQQHQSQRLEQATEALQNDPTLQAIMQTFDAKLQ 513 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 2/164 (1%) Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQ 538 A + + + T + + + W ++QL L L Sbjct: 356 PAGDDSEINPIKLTQTRTPAPEKQPIATHKTDKTILPNNEKDLHWPTLIAQLKLTGLTHA 415 Query: 539 VALNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVR 597 +A + +N V L L Q L + + KLA ALS + L+I D ++ Sbjct: 416 LAQQCALQSYHNNHVSLCLDPRQAALRSAKQETKLAHALSEYFKKPITLSIGVGD-TSLS 474 Query: 598 TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 TP Q ++L QA E++ D +Q + + FDA+L +SI+ Sbjct: 475 TPARLEQQHQSQRLEQATEALQNDPTLQAIMQTFDAKLQPQSIQ 518 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 148/436 (33%), Positives = 237/436 (54%), Gaps = 2/436 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ L R +RPQ F +VVGQ H+ + N L R+ HAYLFSG RG GKTS+A+++AK Sbjct: 1 MAYQALYRVYRPQRFDEVVGQAHITRTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE PC C CR I +G D+ EIDAAS V++ R++ D V+Y P+ + Sbjct: 61 AINCEQAPVNEPCNECPTCRAITEGSSPDVFEIDAASNNGVDEIREIRDKVKYPPSEAAY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS +FNALLKTLEEPP H F+LATT+P K+P TI+SRC +F +K +V Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPAHAIFILATTEPHKIPATIISRCQRFDVKRHEV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +Q+ ++++IL+++ I + AL+L+ARAA+G +RDALSL DQA+A +G ++ AV + Sbjct: 181 DQLMERMQYILSDQTIGYTETALRLIARAADGGMRDALSLLDQAVAFSNGDLTDDAVLEV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G ++D+ L++ A+ ++++ + + G + + + +++ +++ SP Sbjct: 241 TGAVEDEALLAVANALQAHQVDQLLQTLEKMQRAGKDLKRFVEDLVFFYRDTLLLKTSPT 300 Query: 301 ALGNDMAAIE-LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A+ A + TI + L ++++ R+ VE+ ++ Sbjct: 301 AVDLLERARPTEAFKTFVETIETEACFHIIEQLHDCQQQMRLTNHPRVLVEIAFIQIAE- 359 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 R + +Q + P + P Q P + +A + Sbjct: 360 QGRTTGQIMQSLQQEVRELKEQMHQLKVTGVPAAEGTPAQQPAKRKQARPTVRIAKERIR 419 Query: 420 QRVQGATKAKKSEPAA 435 Q + A KA+ E Sbjct: 420 QMLSRAEKAQLLEIQE 435 >UniRef50_D1A8C7 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8C7_THECD Length = 715 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 173/622 (27%), Positives = 256/622 (41%), Gaps = 53/622 (8%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L RK+RP TFA++ GQEHV L L GRI+HAYLFSG RG GKTS AR+LA+ Sbjct: 1 MS-LALYRKYRPATFAELKGQEHVAEPLQQALRNGRINHAYLFSGPRGCGKTSSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T PCG C++C + G +D+IEIDAAS ++D RDL + +AP Sbjct: 60 SLNCEQGPTPDPCGKCESCVALGPGGSGHIDVIEIDAASHGGIDDARDLRERAFFAPVSA 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFKVY+IDE HM++ FNALLK +EEPP H+KF+ ATT+P K+ TI SR + + L Sbjct: 120 RFKVYIIDEAHMVTTGGFNALLKLVEEPPPHLKFVFATTEPDKVIGTIRSRTHHYPFRLL 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAV 237 +R +E +L E + +EP AL L+ RA GS RD LS+ DQ +A D ++ Sbjct: 180 PPGTLRELVEEVLQSEGVPYEPAALPLVVRAGAGSARDTLSILDQLVAGADESGITYARA 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 ++LG D +V+A +G V A I+ G + ++L + + ++ Sbjct: 240 VSLLGYTDSALLNEVVDAFAARDGAAVFAAIDRVIESGQDPRRFATDLLERVRDLVILAN 299 Query: 298 SPAA----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A L + +M+ A + + L G +E+ A R+ +E+ Sbjct: 300 VPEAGSTGLLDVPPDELEQMQRQASAMGAATLSRAADLLHAGLREMRGATSPRLALELVC 359 Query: 354 LRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQP-------------------- 393 R L + + T Sbjct: 360 ARILLPAAYQDERSLLARLEQLEQRIAQGGIGTTVTGGASPATGAPAPSAPAPQGLAAPA 419 Query: 394 --------QSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNA 445 +SA +QAP+ P S+ A Q + P A A P Sbjct: 420 AAPAWPSAESASRQAPSA-YPTAPSRPPAPEPPAQGPSNQSAGASPAPVQAVPAAPRPGG 478 Query: 446 ALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEK 505 A A+ P P A + RW A +P A + Sbjct: 479 AGWGAAATPSVGGGIPAPG----AENRSVDNRWGAPSPPAPASSNAPAGGGPDVAAVRQA 534 Query: 506 TPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNN 565 P + + ++ W + +S + L + + + ++ + N Sbjct: 535 WPNIVEAVKKKSKVA--WTSIMSGVQPVSLEGNLL----------TLAFEVPGARTNFVN 582 Query: 566 RGAQQKLAEALSMLKGSTVELT 587 L E G + Sbjct: 583 GRRDTVLREVFREFFGVDWRID 604 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 134/355 (37%), Positives = 219/355 (61%), Gaps = 2/355 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y L RKWRP+TF+++VGQE ++ L N ++ ++ HAYLFSG RG GKT+ A++LAK + Sbjct: 2 YLALYRKWRPKTFSEIVGQETIVKILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE + PC C +C I +++ EIDAAS +++ R+L ++++ PA+G++KV Sbjct: 62 NCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGIDEIRELRESIKLVPAQGKYKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPPEHV F+LATT+ K+PVTI+SRC +F K + + Sbjct: 122 YIIDEVHMLTNEAFNALLKTLEEPPEHVIFILATTEFNKVPVTIVSRCQRFDFKRISTKT 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L++I +E + +E AL L+A A+EG LRDALSL DQ + + +++ + +LG Sbjct: 182 IWEHLKNIAEKEKLQYEAEALHLIAEASEGGLRDALSLMDQILVF-NPKITVEDTLKVLG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + L L+ A+ E N +++ I E RG++ + + ++L + + +++ + + Sbjct: 241 FVSWRKILELISAIRENNQLKIINEIAEVVERGLDVKLFVQQILQYVRYLNLIK-NGIEV 299 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 M + ++R A + L + + +E+ YA R+ E+ LL+ Sbjct: 300 EELMPEVLEKLRSEAALWEEDKLFLLWDDIARLEREVRYASFPRIWAEVGLLKVA 354 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 141/451 (31%), Positives = 235/451 (52%), Gaps = 3/451 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y L R+WRP+ F D+VGQ+HV L N L ++ HAYLFSG RG GKT+ A++LAK Sbjct: 1 MAYLALYREWRPKNFKDMVGQDHVTKTLTNALMQSKVAHAYLFSGPRGTGKTTTAKVLAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE PC C C I+QG +++ EIDAAS +++ RDL D V+ + ++ Sbjct: 61 ALNCEHREGVEPCNQCAFCLSIDQGSAMEVFEIDAASNRGIDEIRDLRDKVRLSAGESKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPPE V F+LATT+ K+P+TILSR +F + + Sbjct: 121 KVYIIDEVHMLTTEAFNALLKTLEEPPERVVFILATTEVHKIPLTILSRVQRFEFHRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI L+ + EP ALQ++A+ +EG LRDALS+ DQ + DG++ + V + Sbjct: 181 EQIHSHLDKVCQTIGRDVEPEALQIIAQKSEGGLRDALSILDQCLLL-DGKLGVEQVYQV 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + ++ + LV+ ++ + + + + E +G++ ++ E+L + + + + Sbjct: 240 LGMVGEEFSAQLVDHLLTGDYAKALGCLGEGINQGMDPRQIIRELLDYMRQALLYAST-Q 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA-F 359 A + + + + + + LL G +L YA + R+ E+ L++ + Sbjct: 299 AFPQVAPHLREHLAYQCQKLGLKTLLQWIGILLQGESQLKYAANARLAAELLLVQVIYDS 358 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P+V + ++ + + + + E L Sbjct: 359 QPGYSKESPQVLERLQELEEEIKNLSTGKSRQESKGELPKKVNERSSEPPGHKKPELPPL 418 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERL 450 Q ++ ++ + + + LE++ Sbjct: 419 QDKPAISQGGETAALSIEQVQGRWGDILEQV 449 >UniRef50_Q1LLG8 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=15 Tax=Betaproteobacteria RepID=Q1LLG8_RALME Length = 795 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 216/511 (42%), Positives = 281/511 (54%), Gaps = 6/511 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQVLARKWRP+ F +VGQEHV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 GLNCET-----GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC GITA PCG C C EI+ GRFVD IE+DAAS V++ LLD YAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHML+ H+FNA+LKTLEEPPEHVKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+HIL +E I+H+ AL+LLA+AA GS+RDALSLTDQAIA GQVS + Sbjct: 181 KQMPPGHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLG +D + L++A+ +G ++ + + A R + + L ++ LLH++A+ Sbjct: 241 AVRGMLGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALA 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 Q PA++ ++ E +R LAR + QL+YQ +GR EL APD G MTLLR Sbjct: 301 QAVPASVQDEWPEAED-VRRLARQFDAQETQLFYQIANLGRSELALAPDEYAGFTMTLLR 359 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 LAF P + T A A P+ +V Sbjct: 360 MLAFRPSTAPASSVGGQGGGGQQVVRPRPAGTTSAAPSPRAMASAVAEPVAAEPVKVAPV 419 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 T A + AA +A P +AL A Sbjct: 420 VAPAAPTAPITAAAPAASAAPAMPAVPAKSAEPAPPQADVDTSMSPARAALAAARQASAG 479 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKT 506 + + A + Sbjct: 480 RAGRPMSAAPNAGAAAAASSRPAAQPLRPPS 510 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 78/292 (26%), Gaps = 12/292 (4%) Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 P P + AP V + + A + Sbjct: 504 QPLRPPSASRPATTAAPAPAPAVAPAAAPVVTPVVTQAVAPSKAAAAPVAAARPAPVAKP 563 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALER------LASVTDRVQARPVPSALEKAPAKK 473 A E A A+ P + + + + A + Sbjct: 564 APQPEAKSVPPWEAAGASDVPPWEEMPPDLPVIGPYDSDPGYDPSFGGFDNGFDSDSADR 623 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAE---AIERDPWAAQVSQL 530 + P + ++ P+ A P++A + + W + L Sbjct: 624 APRAARKPAPTQSAAKPISKPEPEPAAQLAPAVPQVAPSAGEDGTPPVFTGDWPEFAATL 683 Query: 531 SLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVE 590 L L +Q+A + LHLR + ++L AL V + V Sbjct: 684 PLKGLAQQLAHQSELHRVVGR-TLHLRVPVAAIAEANVAERLQAALVEHFRVDVRVQCVV 742 Query: 591 DDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRP 642 T A E+ +A I D +Q L R F ++ SI+P Sbjct: 743 G--GVTHTAAAVDAAARAERQREAEAEIDRDPFVQGLLREFGGQIVPGSIQP 792 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 166/524 (31%), Positives = 258/524 (49%), Gaps = 8/524 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+ L K+RPQ FADVVGQ V+ LAN + LGR+ AYLF G RG GKTS AR+LAK Sbjct: 6 NYEPLHLKYRPQRFADVVGQGAVVQTLANAIRLGRVAPAYLFCGPRGTGKTSSARILAKS 65 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNCE G T PC C CR I G +D++EIDAAS T V++ R+L++ Q+AP R+K Sbjct: 66 LNCEQGPTPDPCQACSQCRAITAGASLDVLEIDAASNTGVDNIRELIERAQFAPVNSRYK 125 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDE HMLS +FNALLKTLEEPP V F+LATTDPQ++ TI+SRC +F + + ++ Sbjct: 126 VYVIDECHMLSNAAFNALLKTLEEPPPRVVFVLATTDPQRVLPTIVSRCQRFDFRRIPLD 185 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L I +E I P ALQL+A+ ++G LRDA L DQ ++ +G ++ +AV ++ Sbjct: 186 DMVAHLGKIAAQEGIPITPEALQLVAQLSQGGLRDAERLLDQ-LSLLEGSITPEAVWDLV 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA- 300 G + + Q L+L++A++ + + V++ + RG E ALL ++ L + +V+ +P Sbjct: 245 GGIPEQQLLALMDALLAQDVQAVLSQTRQLLERGKEPLALLQNLVALYRDLLLVKTAPQQ 304 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-A 358 L + +++ A + L ++ + ++ +E+ L+ L Sbjct: 305 RELVAVTDSTWAALQQRAPRYSVEILLAAQSHLRQCEPQIRQSGQPQLWLEIALVDLLGQ 364 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P M + A P + PP + P A T+ P + S V + Sbjct: 365 LRPSMVAEDSAERSPFPALDLS---PAPQRTPPDGTAPPAPAATIS-PSSPSTVGEIDEL 420 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 + S+ A + E RP K + Sbjct: 421 TVGPSASPAVASSQKADRATRTESSEQPREPARDAATVKLLRPHWDEFLKRLSPLTKALM 480 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 + + E + K +E ++ E + + + P Sbjct: 481 GSGHLHQETPEAITLAFPSKGLVEKVRSKEAELRSVLHNLLQRP 524 >UniRef50_A6CH16 DNA polymerase III gamma and tau subunits (Fragment) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CH16_9PLAN Length = 484 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 150/446 (33%), Positives = 231/446 (51%), Gaps = 7/446 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y VLAR++RPQ F++VVGQ V AL N + R+ HAYLF+G RGVGKTS+AR+LAK Sbjct: 6 MQYTVLARRFRPQNFSEVVGQGMVAQALQNAIRGDRVAHAYLFTGARGVGKTSMARILAK 65 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PCG C+ C+ I G VD++EID AS ++D R L NV R ++ Sbjct: 66 ALNCPHTQDGIPCGECEVCQNIAVGSDVDVLEIDGASNRGIDDIRSLRANVNVRSMRSKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML++ +FNALLKTLEEPP +VKF+ TT+P KLP TILSRC +F ++ Sbjct: 126 KIYIIDEVHMLTKEAFNALLKTLEEPPPNVKFIFCTTEPNKLPDTILSRCQRFDFGYIEE 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+ I E ++ A+QL+AR A GS+RD+ S+ DQ ++ G+ ++ ++V + Sbjct: 186 NSICDRLKQIAEAEQVSVADDAIQLVARRAGGSMRDSQSIFDQLLSFGESHLTAESVHRI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT D++ + L++A++E + + + A G++ + ++L L +++V + Sbjct: 246 LGTASDERLIELIDALIEQKRDVALTHFDAALNAGVQLNEFVDQLLNYLRDLSVVATGAS 305 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L + ++ A +Q L R + A R VE+ L+R Sbjct: 306 QVTLLSISEMNRASLQRQAEAWGIQTCLAAFQILNEARNRMFRASHGRALVELALIRMSL 365 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVP-----LPETTSQVL 413 L + S P P P P + + + Sbjct: 366 LEDLDLLSRFLSSGGQIPAAPAAVRQASPSLSAAAVSQPVSEPPTPPQESTEPSSDQKKI 425 Query: 414 AARQQLQRVQGATKAKKSEPAAATRA 439 + +++ + + S PAA T Sbjct: 426 EKKNEIESPVASESIESSPPAAETVP 451 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 162/475 (34%), Positives = 241/475 (50%), Gaps = 3/475 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ F DVVGQ ++T L N L GRI HAYLF+G+RG GKT+ ARL+AK Sbjct: 1 MAYEPLHHKYRPQRFGDVVGQGPIVTTLTNALKAGRIAHAYLFTGSRGTGKTTTARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T PCG C+ C I G +D+IEIDAAS T V++ R+L++ Q+AP + R Sbjct: 61 ALNCIHGPTPDPCGRCEQCLAIATGSALDVIEIDAASNTGVDNIRELIERAQFAPVQSRQ 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHMLS +FN LLKTLEEPP HV F+LATTDPQK+ T++SRC +F + + + Sbjct: 121 KVYILDEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTDPQKVLPTVISRCQRFDFRRIPL 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + LE I +E I E A++L+A+ A+G LRDA SL DQ +A +G + + + + Sbjct: 181 TDMVKHLEEIAWKEDIDIEHEAVELVAQIAQGGLRDAESLLDQ-LALLEGTIGAERIWQL 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + + L + E + + R++ + G E +L ++LG + + +P Sbjct: 240 VGAVPERELLVIGECIQAGDSTRLIEQVRRLLDSGKEPLQVLQDLLGFYRDLLIAHTAPD 299 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L AA +M E A+T+ + + L ++ + R+ +E+ LL LA Sbjct: 300 RRDLVAVTAASWQQMCERAKTLSIPQLLALQERLRQAEPQIKTSTQPRLWLEVGLLGLLA 359 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + A P P + P P P + Q Sbjct: 360 SPSQNQPVALAPAAARPAAPVPVPPPRPAEERPTPPPPAAPRGVEERPNSVPQPPVEPTP 419 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 QR Q + + A ARP + R +P + + Sbjct: 420 PQRPQVPPPSIEPAAAIHRPARPSGSTPDGTGLRERWPEWIRLIPQPTQSLMSSS 474 >UniRef50_UPI0001C37DC8 DNA polymerase III subunits gamma and tau n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37DC8 Length = 539 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 140/418 (33%), Positives = 214/418 (51%), Gaps = 5/418 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RKWRP TF DV+ Q+ L N + G+ HAYLF+G+RG GKT+ AR+LAK + Sbjct: 2 YKALYRKWRPMTFDDVISQQQTTDTLKNQIMSGKTAHAYLFTGSRGTGKTTCARILAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC CD CR+ + G D++EIDAAS V++ RDL D Y P RG++K+ Sbjct: 62 NCRNMKDGNPCLECDICRDADSGALTDIVEIDAASNNGVDNIRDLRDAAVYTPDRGQYKI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLK +EEPP +VKF+LATT+ K+P TILSRC +F + + E Sbjct: 122 YIIDEVHMLSAGAFNALLKIMEEPPPYVKFILATTEIHKVPATILSRCQRFDFRRIKPED 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L++I +E + ++A+ A+G +RDA+SL D+ + G ++ VSA G Sbjct: 182 IAARLKYIAEQEELTLTDGGAAMIAKLADGGMRDAVSLLDRC-SVGGEEIDEDVVSAAAG 240 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D L+EA+ + + +++ + L E++ L I ++++SP Sbjct: 241 IAGRDYLFGLLEAINTGDTAKALSITASLYDMSKDIGRLCEELISQLRNIMLIKVSPDTA 300 Query: 303 GNDM---AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-A 358 + + A ++RELA + I + L + A +RR+ EM L++ Sbjct: 301 ESLIVCVAEEMQKLRELADSTELDTIMSHISILQECSSNMNRAMNRRVEFEMALIKLCGN 360 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 + + P QV QQ + ++ A Sbjct: 361 IRNTTEAIDNSEIYDKIKQLEDKIKNAPVQVQSGAPQQQQQPEVLTASSPPTEADPAP 418 >UniRef50_B1XPA0 DNA-directed DNA polymerase III chain dnaX n=2 Tax=Cyanobacteria RepID=B1XPA0_SYNP2 Length = 742 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 168/632 (26%), Positives = 262/632 (41%), Gaps = 44/632 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQTFA +VGQE + T L+N L RI AYLFSG RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQTFAQLVGQEAIATTLSNALEQRRIAPAYLFSGPRGTGKTSSARILAK 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC T PCG C+ CR I G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCLNAAQPTPHPCGECEVCRAIANGSALDVIEIDAASNTGVDNIRELIERSQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+KVY+IDE HMLS +FNALLKTLEEPP HV F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RYKVYVIDECHMLSVAAFNALLKTLEEPPAHVVFVLATTDPQRVLPTIISRCQRFDYRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++ + L I + E+I ++ L+A+ A G LRDA ++ G+++ V Sbjct: 181 PLDAMVAHLRKIAHLENIDIPLESVTLIAQIANGGLRDA-ESLLDQLSLLSGEITPDKVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++G + + L L++ + + E V+ RG E +L + + + + + Sbjct: 240 DLVGAVPERDLLQLLQVIHSNDPEAVIQQCRSLLNRGREPLVVLQNLASFYLNLLIAKTA 299 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L + + A + I Q L +L R+ +E+TLL Sbjct: 300 PQRGDLIAVTQPTWEILCQEANQWELSTILQGQQHLKESEYQLKNTTQPRLWLEITLLGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 L P TP Q+ P P P Sbjct: 360 L-------------PAAFGQTQTTRTATTPLNTQINLQTQPTATPPTSPPPPQDIPHPFG 406 Query: 417 QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + G P + + ++ + +A + Sbjct: 407 ETPPATNGHGSGTPPSPVDTQVHQVPPKPEVPQVPAPVPEAKAIAKAPPSQDVIPPTVQP 466 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 T AL+ + W V QL L Sbjct: 467 TEPPPLSPSPPATTSPTISALE--------------------REELWQGIVRQLPLLSQS 506 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD---- 592 + +D++ + ++S+ + +L A + G+ +++T+ Sbjct: 507 LFRDHGKLLQLTDHSALIGIKSANLLKIAKNKTLQLEAAFEKICGNPLKVTLQVGHGLEN 566 Query: 593 --NPAVRTPLEWRQAIYEEKLAQARESIIADN 622 TP+ A ++ A+ I Sbjct: 567 GQGGTSVTPILSTPAPAPTVISPAQNPIEMPP 598 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 209/422 (49%), Gaps = 10/422 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V ARK+RP TF VVGQ + T L N + G++ HAYLF G RGVGKT+ AR+ AK + Sbjct: 4 YIVSARKYRPMTFDSVVGQSALTTTLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFAKAI 63 Query: 63 NCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NCE C C++CR + R ++ E+DAAS V+ + L++ + P G++K Sbjct: 64 NCEHPREDGEACNECESCRAFNEQRSYNIFELDAASNNGVDQIKVLMEQTRIPPQVGKYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 V++IDEVHMLS +FNA LKTLEEPP+HV F+LATT+ K+ TILSRC + + + V Sbjct: 124 VFIIDEVHMLSTAAFNAFLKTLEEPPQHVIFILATTEKHKILPTILSRCQIYDFERMTVA 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 + L+ + +E I +E +AL ++A A+G +RDALS+ DQA + G ++ Q V L Sbjct: 184 NTINHLKMVAEKEGIQYEEQALAVIAEKADGGMRDALSIFDQAASFCMGNITYQKVIEDL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 LD D LV+ +E +M ++ RG + ++ + + + M + P Sbjct: 244 NVLDSDNYFRLVDLALENKVAEMMVTLDGILNRGFDGGNMIQGLAQHVRNVMMAK-DPQT 302 Query: 302 L--GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 L + + + A+ P + + + + ++R+ VE+TL++ Sbjct: 303 LPLLETSDDQKAKFQAQAQKAPTPFLYKALELMNQCDIHYRASSNKRLLVELTLIQIGQI 362 Query: 360 HPRMPLPEPEVPRQSF------APVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 P R + + + +P + + + P + Sbjct: 363 TQPEDQDVPSAGRTPNRLKSLFQKLLAQSKLASQGAGSEPSGSSENRSSQPGASAATATA 422 Query: 414 AA 415 Sbjct: 423 VP 424 >UniRef50_C3PJQ2 DNA polymerase III, gamma and tau subunit n=3 Tax=Corynebacterium RepID=C3PJQ2_CORA7 Length = 868 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 170/623 (27%), Positives = 275/623 (44%), Gaps = 20/623 (3%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFA+VVGQE V T L+ L GRI+HAYLFSG RG GKTS AR++A+ LNC Sbjct: 2 ALYRKYRPATFAEVVGQEQVTTPLSAALDAGRINHAYLFSGPRGCGKTSSARIMARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 E G T+TPCGVCD+C + G +D+ E+DAAS VED R+L D YAPA R+++ Sbjct: 62 EQGPTSTPCGVCDSCVSLAPGGPGNLDVTELDAASHNGVEDMRELRDRAYYAPAESRYRI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+S NALLK +EEPPEHV F+ ATT+P+K+ TI SR + + L Sbjct: 122 FIIDEAHMISASGANALLKVVEEPPEHVIFIFATTEPEKIIGTIRSRTHHYPFRLLTPPA 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 ++ LE + E++ + ++ +A GS RD LS+ DQ +A +G ++ +L Sbjct: 182 MKGLLERTVASENVHVDDTVYPMVIQAGGGSPRDTLSILDQLLAGAGPDGLTYDVARPLL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D+ + +EA+ + + L+++ G + +++L L + ++Q P+A Sbjct: 242 GVTDEGLLDNTIEALASQDKAGLFRLVDDVIEAGHDPRRFAIDLLDRLRDLMILQAVPSA 301 Query: 302 LGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L + + A+ + +T+ L A R+ +E+ + Sbjct: 302 LEEGLVSAPTDRGEVLTAQAQRFSGPQLAYLAETVNERVSSLRGATSPRLLLEILCAHLI 361 Query: 358 -----AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV 412 A LP P AP T Q A Q P +Q Sbjct: 362 VGAAPAAAAAGQLPTAAPQGAGAQPSAPAGQPTAPAQRQQSAVASAQDPAAAAAAIIAQR 421 Query: 413 LA--ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 + A +Q + Q + + A + + ++ + E P Sbjct: 422 RSRQAAKQEAQQQQPLQQPQQAEKAQEAVQQAQQTPAPEDSQPQVPERSAQPEAQPEPQP 481 Query: 471 AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQL 530 + + + + +Q E + ++ E+ PE A R W+ + + Sbjct: 482 EQPKQRQEQPERQQQEQHEQQQQEQTEQQEQAREQHPEAEQPQDPAAEIRGRWSDLRATI 541 Query: 531 SLPKLVEQ--VALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVEL 586 V + +A D+ + L + +N+ G + + L T+++ Sbjct: 542 GRRNKVAEIMLAEARVLGVRDDTLVLGHTTGALAERINSPGTNEVIVTVLQEELNRTLKV 601 Query: 587 TIVEDDNPAVR--TPLEWRQAIY 607 T V +P T E Q Sbjct: 602 TCVIGTDPKAHGFTVTEPVQRTQ 624 >UniRef50_UPI00016C46EC DNA polymerase III gamma and tau subunits n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46EC Length = 614 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 179/523 (34%), Positives = 269/523 (51%), Gaps = 17/523 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y V+AR++RPQ F++++GQEHV AL N L GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 16 AYTVVARRYRPQQFSELIGQEHVAGALVNALKSGRVAHAYLFTGARGVGKTSAARILAKA 75 Query: 62 LNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC T TPC CD+CR + G VD++EID AS KVE+ RDL NV + PARGR Sbjct: 76 LNCLKTDKATPTPCDECDSCRAVMTGDDVDVLEIDGASNNKVEEVRDLRQNVGFRPARGR 135 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+Y+IDEVHMLS +FNALLKTLEEPPEHVKF+LATT+ QK+P+TILSRC +F + Sbjct: 136 YKIYIIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKIPITILSRCQRFDFAHVG 195 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +I QL+ I+ E + AL+L+AR A GS+RD+ SL DQ +AS G ++ V+A Sbjct: 196 PGKIFEQLKRIVEREGHQADDDALRLVARRAAGSMRDSQSLLDQLLASSSGTLTAGQVTA 255 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT DD+ + L +A++ + + + I E RG++ L+ +++ + +V Sbjct: 256 VLGTAGDDRVIELAKAILANDPKTALDRIAEWVERGLQIGELIDQVVEYWRALMLVSCGG 315 Query: 300 AALGN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + +R A+ + + + L + + P ++ +EM ++R Sbjct: 316 PDVRELPVSPNQHEAIRTQAKAVSLDTVLAGLEILTATKARMRGTPHVQVLLEMAVVRLC 375 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 L + AV P ++ P T + LA+ Sbjct: 376 RLPDLRSLSQLV-----------QAVSQPGVQFVASAASNGNPPPARPQPTPAAPLASEA 424 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 + AT + SE + + P A + V R A EK P + R Sbjct: 425 AKKNGTPATAGRPSENGS--SSVPAEVTATPLSDATVQTVWDRFFRYATEKYPILSQHLR 482 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIER 520 + ++ + + + E E + +A++R Sbjct: 483 YASSYAIFGPNALAVRFPTSYANAKKECEGEASLARFQDALKR 525 >UniRef50_B5YKX9 DNA polymerase III subunit gamma/tau n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX9_THEYD Length = 512 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 139/388 (35%), Positives = 226/388 (58%), Gaps = 2/388 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y LARK+RPQ F+D+ GQ+ V+ L N L G+I HAY+FSG +GVGKTS AR+LAK Sbjct: 1 MEYLGLARKYRPQKFSDLTGQDVVIKILQNSLQTGKISHAYVFSGPKGVGKTSTARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C I++GR + +IEIDAAS T VE+ RDL +N++YA A G + Sbjct: 61 ALNCIDSQN-KPCDKCPSCVAIKEGRAMSVIEIDAASHTSVENIRDLRENIRYASAEGFY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDE HMLS+ +FNA LKTLEEPP HV F+LATT+P+K+P+T+LSRC K + + Sbjct: 120 KVYIIDEAHMLSQSAFNAFLKTLEEPPPHVVFVLATTEPRKIPLTVLSRCQHLQFKRIPI 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I+ +L+ I N+E+I AL +A +EGS+RDAL++ DQ + + V+ V+ + Sbjct: 180 NLIKQRLQFICNQENINATEEALYTIASNSEGSMRDALTMLDQVTSFTEN-VTQDNVNLL 238 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G D + L E +++ N E+++ + E G +++ L+ +++ + + +++ + Sbjct: 239 IGGTDVNVLYELTECLIDGNREKIILKVEELNNFGTDFKRLVGDLINFIRNTLISKITKS 298 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + +L + + + + L+ + + R+ E+TLL+ Sbjct: 299 FKLYISESEASLIEKLNKKTSEEHLVVLLKELINSEFAIRSSFFPRVIFEITLLKLSFLA 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQ 388 + + + +P+ P ++ Sbjct: 359 HFKNIDDIIEEAKKKSPLQPPSLPLNNN 386 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 146/422 (34%), Positives = 222/422 (52%), Gaps = 8/422 (1%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L RKWRPQTF +VVGQEH++ L N L I HAYLF+G RG GKT+IAR+LAK LN Sbjct: 3 IALYRKWRPQTFEEVVGQEHIVITLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKALN 62 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C G T TPC C++C EI +GR +D+IEIDAAS +++ RD+ + + P R R+KVY Sbjct: 63 CVQGPTPTPCLKCESCVEIAEGRSIDVIEIDAASNRGIDEIRDIREKARLLPVRDRYKVY 122 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDEVHML+ +FNALLK LEEPPEHV F++ATT+PQK+P+TILSRC +F + L +++ Sbjct: 123 IIDEVHMLTNEAFNALLKILEEPPEHVVFIMATTEPQKVPLTILSRCQRFDFRRLTRDEV 182 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 QL I +E AL+L+A ++GS+RDA+SL +Q + D +++ + +LG Sbjct: 183 IKQLAKIAEKEGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQEITEELARNLLGL 242 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP--AA 301 + + +A+ E N +L+ + G + E+L + +++ Sbjct: 243 PTYEFTYNFAKALGEYNILEGYSLLQQIFQMGKNPQQFAKELLQHFRNLLLLKADERIGN 302 Query: 302 LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 L + + + + +Q LLI L + + +EM LL P Sbjct: 303 LLSLTQEEFEELMQETKLYTIKRLQDIIDQLLILENRLRDLTNAPLVMEMILL------P 356 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 E + P+ +P + ++ P + Q L + Sbjct: 357 LFMKEETAETQPISQPLTQAVSSSPKGEEKTEEKDKKEEIVTGKPNIDEIIDKWPQLLAK 416 Query: 422 VQ 423 ++ Sbjct: 417 IK 418 >UniRef50_C4LG88 DNA polymerase III, gamma and tau subunit n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG88_CORK4 Length = 990 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 162/557 (29%), Positives = 250/557 (44%), Gaps = 23/557 (4%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFADVVGQEHV L+ L GRI+HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYRKYRPATFADVVGQEHVTVPLSRALDAGRINHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T+TPCG C++CR + G +D+ E+DAAS VED RDL D YAPA R++V Sbjct: 62 VHGPTSTPCGECESCRALAPGGPGSLDVTELDAASHRGVEDMRDLRDRAIYAPAESRYRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+++ FNALLK +EEPPEH+ F+ ATT+P+K+ TI SR Q+ + L Sbjct: 122 FIIDEAHMITKEGFNALLKIVEEPPEHLVFIFATTEPEKVLTTIKSRTHQYPFRLLAPND 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAML 241 +R LE I +EE + E L+ RA GS RD+LS+ DQ +A D ++ + +L Sbjct: 182 MRGLLERICSEEKVQVEDSVYPLVIRAGGGSPRDSLSVLDQLLAGADENGITYAHAAGVL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D + VE++ + + IN G + +++ + ++Q P A Sbjct: 242 GITDSALIDAAVESVANNDPAGLFTTINNVLDAGHDPRRFATDLVDRFRDLLVLQSIPDA 301 Query: 302 LGNDMA----AIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + + A+++ P + + G EL A R+ +E+ R + Sbjct: 302 FDQGLVDAPLDQRETLADEAQSLGPATLTRCAAVVSDGLNELKGATSPRLLLEIMCARMV 361 Query: 358 ---AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 A L + +S P A + S+ + T + A Sbjct: 362 MPGAADGIEALSQRVEALESGQPTASRSTSDNGHRVGSTSSSASEDGTRAAGSGAADNGA 421 Query: 415 ARQQLQRVQGATKAK-----KSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + K + P + + E + + Sbjct: 422 SGSDANATPPRAKGGGRIIWPRKNKKTETPTPQTSPSSEANTETSQEAKGTEHRDTGNAK 481 Query: 470 PAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQ 529 P + ++ A +E ATP + A + + + + + Sbjct: 482 PQETQSTSSGAPETPASPQEDAATPSQDEAAASSQAEAAPSQESVD--------PRTMDR 533 Query: 530 LSLPKLVEQVALNAWKE 546 +L K + + AL +E Sbjct: 534 ETLSKYLREQALQQERE 550 >UniRef50_Q1ATA7 DNA polymerase III, subunits gamma and tau n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATA7_RUBXD Length = 567 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 157/546 (28%), Positives = 242/546 (44%), Gaps = 17/546 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + L R+WRP+TF ++ GQE V+ L + GR+ HAYLFSG RG GKTS A++LA Sbjct: 1 MKHATLYRRWRPRTFGEIAGQEPVVRTLRRAIETGRVAHAYLFSGPRGTGKTSTAKVLAM 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 GLNC G T PCG C++CR I G +D+IE+DAAS +++ R+L D V APA GR Sbjct: 61 GLNCAQGPTPEPCGRCESCRSIVAGSSMDVIEMDAASNRGIDEIRELRDRVNLAPAAGRA 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLK LEEPPEHV F+LATT+ K+ TI+SRC F + V Sbjct: 121 KVYIIDEVHMLTTEAFNALLKMLEEPPEHVVFVLATTEKHKVLPTIISRCQSFDFRRPGV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + +L I E I E AL +ARA+ GS RDA + DQ + +G+V+ V + Sbjct: 181 GTLVEKLSEIARAEGIEAEREALTAIARASGGSFRDAEGMLDQISSFSEGRVTVALVREL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG+ + +A+ E + +++ ++ G + E++ L + ++ +P Sbjct: 241 LGSAGPEMLAETADALHERRAADALRVVDRLSSEGRDLGQFAAELISHLRVLMLLPHAPE 300 Query: 301 -ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 AL + E AR IP + + L + D ++ +E+ L+ Sbjct: 301 AALAEAGPEERPALEEQARRIPTGETVRMIEALGETSGRIRRGGDPKLELELCFLKLARD 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQS-------APQQAPTVPLPETTSQV 412 + L ++ P + P + A + P P T Sbjct: 361 YTEPSLEGLVRRVEALEKRLEEGSAPPRENPAKESPEQPPDGRAGEAPPRQEEPPRTGAE 420 Query: 413 LAARQQLQRVQGATKAKKSEPAAATRAR---------PVNNAALERLASVTDRVQARPVP 463 L LQ ++ + + + R + S + + P+ Sbjct: 421 LDWDSVLQELRARRQVPVAALYESARVEGCEDGLVKISFPEELAPLMKSAGEPKRVEPLR 480 Query: 464 SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPW 523 LE+ + K + + P E E P + + Sbjct: 481 DVLEERLGFRPRVELKLSGEAPPRPPAAYPPSPEPARREGEDAPRAQERPHPPREGPEGE 540 Query: 524 AAQVSQ 529 + Sbjct: 541 EDVIRS 546 >UniRef50_Q1NUY3 DNA-directed DNA polymerase n=5 Tax=Deltaproteobacteria RepID=Q1NUY3_9DELT Length = 706 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 170/705 (24%), Positives = 281/705 (39%), Gaps = 76/705 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRP+TFA+VVGQ V+ L N L L R+ HA LF+G RGVGKT++ARL+AK Sbjct: 1 MSYLVLARKWRPRTFAEVVGQRPVVRTLQNALRLQRVAHAMLFAGVRGVGKTTLARLMAK 60 Query: 61 GLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC+ + PC C +C+EI G VDL EID AS +++ R+L +N+++ P Sbjct: 61 ALNCQEPEPASRPCNQCKSCQEINAGAAVDLHEIDGASNRGIQEIRELKENIRFLPVSAS 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+ +IDEVHML+ +FNALLKTLEEPP HV F+ ATT+ K+P+TILSRC ++ L + Sbjct: 121 YKIVIIDEVHMLTTEAFNALLKTLEEPPAHVYFMFATTELHKIPITILSRCQRYELTRVA 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +++ + E + AL +++R A+GS+RD LSL DQ + DG + V Sbjct: 181 YDELLAFFRQVAAREEVTISEAALAMISREADGSVRDGLSLLDQVFSFADGGIDDDDVRQ 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D L A++ R + + + G+ + ++L + + + + Sbjct: 241 LLGLVDRRVFAQLARALLAGELGRALEIFDRGQRAGMNLKRFAADLLDYFRNLVVCRATA 300 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 A L + + E+A P + + LL G +E+ YA ++ +EMT++RA+ Sbjct: 301 GARQLLELGEQELVELEEIAAAHSPETLLYCFNLLLKGIEEMQYASRPKLVLEMTMVRAV 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 +P E P P+P + + +T + + Sbjct: 361 EAGQIVPTAEALGRLDQLLAGLPAEEQIAVAATPRPTARGEGKAAPGGGDTAVEAYQKPE 420 Query: 418 QLQRVQGATKAKKS--------------EPAAATRARPVNNAALERLASVTDRVQARPVP 463 + G + + + EPA + + + +R Sbjct: 421 EAAVTAGIGEPEPALAVSDHGAPHLAAIEPAHVPMYASPSRLPQDAVPRDRLPRGSRDQL 480 Query: 464 SALEKAPAKKEAYRWKATTPVMQQ------------------------------------ 487 A E + Q Sbjct: 481 PLAGVATDPGEPEPELSGADTGQAPAAAGGPEPPPAAPASPKSPATSATPTEPPPEPTPE 540 Query: 488 ------------KEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK- 534 A +K + + R W V + K Sbjct: 541 PTPKPTPKPPPESPAGQQTGDEAPAAGVDKAAAVKGRSREGRDLRRQWDDFVRYVRQRKI 600 Query: 535 -LVEQVALNAWKEESDNAVCLHLRSSQ--RHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 + + + A E + + L + L + L E +++ + Sbjct: 601 WMASVLEMVAGIREENGELRLRYDDPADCKLLEETENSRLLTEFAQDFFQRELKVRLRIR 660 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELD 636 + E + R ++ D +Q + F+ E+ Sbjct: 661 GGDSKEVAA-------NELPREERRALAGDPLVQAVTEIFNGEVV 698 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 183/425 (43%), Positives = 261/425 (61%), Gaps = 12/425 (2%) Query: 1 MS--YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLL 58 MS YQVLARK+RP +F +VGQ H L N L +HH +LF+GTRGVGKT+IAR+L Sbjct: 1 MSEHYQVLARKYRPHSFVKLVGQTHTKKTLINALDANNLHHGFLFTGTRGVGKTTIARIL 60 Query: 59 AKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 AK +NCE GI++ PC C C EI++G+ +DLIE+DAAS T V++ RD+L+N QY P++ Sbjct: 61 AKSINCEQGISSKPCDKCATCVEIDKGQSIDLIELDAASHTGVDNMRDILENAQYMPSKN 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+K+YLIDEVHMLS++SFNALLKTLEEPPEHVKFLL TTDPQKLPVT+LSRCLQF L+ L Sbjct: 121 RYKIYLIDEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQL 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++I QL+ I+N E +++E AL +A GS+RDALSL DQ+I+ G G V+ + Sbjct: 181 THDEILEQLKFIMNAEVLSYEESALGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIK 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 AMLG + D + L + + + V+ I + + RG L ++ L H+I++ Q+ Sbjct: 241 AMLGLVHHDDIIKLTTHLFSQDAKAVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIV 300 Query: 299 PAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 ++ L+ I D+Q++YQ + G K++ AP ++G EMTLLR LA Sbjct: 301 -------NTESNKTIQNLSTQISNFDLQIFYQMSINGSKDMALAPSEQIGFEMTLLRMLA 353 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 F +P ++ + + P + QP+ + T P + Sbjct: 354 FRSDT---QPNTEKKMIEIKSEVKISAPIEEKLQPKVEEKPGITKPTILDINNQQQWETL 410 Query: 419 LQRVQ 423 +Q ++ Sbjct: 411 IQTLE 415 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 4/194 (2%) Query: 452 SVTDRVQARPVPSALEKAPAKKEA-YRWKATTPVMQQKEVVATPKALKKALEHEKTPELA 510 ++ Q + L + + + ++ + ++ P K + E+ P + Sbjct: 335 ALAPSEQIGFEMTLLRMLAFRSDTQPNTEKKMIEIKSEVKISAPIEEKLQPKVEEKPGIT 394 Query: 511 AKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDN-AVCLHLRSSQRHLNNRGAQ 569 + + W + L + + N + ++N + L L + +L + Q Sbjct: 395 KPTILDINNQQQWETLIQTLEFKNGAQILVKNTLFDNTNNATLTLTLDNQFANLLSDQVQ 454 Query: 570 QKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRR 629 + + L ST+ L I P +T + + + EK+A+ + + D +Q L + Sbjct: 455 KSMLTTLRQK-NSTLNLVINLG-KPNAQTLAQKQTQAHNEKMAKIQTQFLNDKGVQKLEK 512 Query: 630 FFDAELDEESIRPI 643 FD +++ SI+ I Sbjct: 513 IFDTKININSIKKI 526 >UniRef50_A5FRM9 DNA polymerase III, subunits gamma and tau n=5 Tax=Dehalococcoides RepID=A5FRM9_DEHSB Length = 570 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 168/582 (28%), Positives = 258/582 (44%), Gaps = 27/582 (4%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ QV RKWRPQT AD+VGQEHV L N LS GRI AYLF G RG GKTS R+LAK Sbjct: 4 MTCQVFYRKWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRILAK 63 Query: 61 GLNCETGIT-ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 +NC T PC C C I +G +D+IEIDAAS T V+D R+L + VQY+P+ Sbjct: 64 AVNCTTNQGKGEPCNTCPMCLSITEGSSMDIIEIDAASNTGVDDIRELKEKVQYSPSLAN 123 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDEVHMLS + NALLKTLEEPP V F+LATT+ K+ TI+SRC +F + Sbjct: 124 YKVYIIDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFHRVS 183 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 + + +L I E I EP AL+L+AR+A GS RD +L Q + ++S V A Sbjct: 184 LVDMTRKLGKISLAEGINVEPEALKLIARSAGGSFRDGENLLQQIATTYGAEISLSQVQA 243 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 LG D++ +L E +++ + + + +N A G++ + E+L L +I +V Sbjct: 244 ALGISGDERIKALAENILKKDIKNGLKTLNAVLADGLDLKQFRRELLDYLRQIMLVNSGS 303 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRR--MGVEMTLLRAL 357 + A + +++++ +I +L ++ D + E+ L+ A Sbjct: 304 ESSLELTADEKKALQKVSGITNLENITKAI----KAFSQLDFSSDTASSLSFELALIDAS 359 Query: 358 AFHPRMPL---PEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 +PL P+ E+P AP P P+ P T+++ A Sbjct: 360 LDKNTVPLPNKPKDEIPAVKADKPAPLEAPKTAASNNIPTKEPKTETLTK-PNTSAETAA 418 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + + + + P E + K+ + Sbjct: 419 TPKPHTKESAPKLTRAAIPIEEKPKYTAPAPPKEEEKVLIGAGDIIEQLKVSWKSILDQA 478 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 K + V + P ++ + + + ++ +L K Sbjct: 479 PDNLKRSAAVAILRSAGVRPVSMD------------KNIVTLSFKYKYHKDKIEELENRK 526 Query: 535 LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEAL 576 + ++ N L S + QKL + Sbjct: 527 VTAELISNFV----GKTCTLVCISEAETNHLVKQAQKLGAQI 564 >UniRef50_Q6MDZ7 Probable DNA-directed DNA polymerase III subunits gamma/tau dnaX n=2 Tax=Parachlamydiaceae RepID=Q6MDZ7_PARUW Length = 522 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 164/522 (31%), Positives = 256/522 (49%), Gaps = 5/522 (0%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS YQV+ARK+RPQTF +V GQE V+T L N + R+ AYLF G+RG GKT++AR+ A Sbjct: 1 MSEYQVIARKFRPQTFKEVFGQEAVVTTLKNAIKFKRLAQAYLFCGSRGTGKTTLARIFA 60 Query: 60 KGLNCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 K +NC+ PC C +CREI G +D++EID AS +ED R + + V YA G Sbjct: 61 KAINCQNSTEDFEPCNQCTSCREITSGSSLDVLEIDGASHRGIEDIRQINETVGYAATSG 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 ++KVY+IDEVHML++ +FNALLKTLEEPP VKF+ ATT+ K+ TILSRC +F+L + Sbjct: 121 QYKVYIIDEVHMLTKEAFNALLKTLEEPPPKVKFIFATTEAHKVLPTILSRCQRFNLSRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 + QI +L+ I ++ I E ALQLLA AEG LRDA SL DQ +A +G+++ V Sbjct: 181 PLSQIMIKLKLIADQLEIDVEEEALQLLAYKAEGGLRDAESLFDQIVAFSEGKINAATVQ 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 ++LG + + L A E N + + A G + + ++ I ++QL+ Sbjct: 241 SILGLMPREAYFELDLAGKEGNFVKAFEIAYRIFAEGKDLNHFIEGLIDHFRHILLIQLA 300 Query: 299 P--AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + L + A L+ +++ + ++ +E LL Sbjct: 301 GITSPLLTISPKEKQFYERAAHLYTQEQCLDLIDYLIESAQQIRFTHSGKIALEAILLHV 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQV-PPQPQSAPQQAPTVPLPETTSQVLAA 415 + H R+P+ + A + + V PP +S PQ + + + Sbjct: 361 IRSHFRLPIEVLVQRLGELEQMLGEASLVNSSVFPPLSKSTPQSSLSTEVKNPPLTPPVP 420 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 + Q T + + ++ A + + + + V P P+ + + ++ Sbjct: 421 LTNNKPSQNLTTSPIEKNLNSSTATSLLSPSTNNCSLFDHFVSEDPTPTQSDLGRSTQKL 480 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEA 517 + + V + TP L EL KL +A Sbjct: 481 PNKDSPSLVAKLNGDNPTPVHQYDTLFQFAAIELEGKLQRKA 522 >UniRef50_Q9RKL5 DNA polymerase III subunit gamma n=10 Tax=Streptomyces RepID=Q9RKL5_STRCO Length = 784 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 169/656 (25%), Positives = 269/656 (41%), Gaps = 65/656 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L R++RP++FA+V+GQ HV L L R++HAYLFSG RG GKT+ AR+LA+ Sbjct: 1 MSSLALYRRYRPESFAEVIGQGHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T TPCG C +CR++ + +D+IEIDAAS V+D RDL + + PA Sbjct: 61 CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 R+K+Y+IDE HM+S FNALLK +EEPPEH+KF+ ATT+P+K+ TI SR + + + Sbjct: 121 RYKIYIIDEAHMVSPQGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAV 237 +R L + E IA E L L+ RA GS+RD++S+ DQ +A +G V+ Sbjct: 181 PPGTLRDYLAEVCGREGIAVEEGVLPLVVRAGAGSVRDSMSVMDQLLAGAGADGVTYDMT 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +++LG D S+VE+ V +G +++ G + + ++L L + ++ Sbjct: 241 TSLLGYTDGSLLDSVVESFVSGDGSAAFGVVDHVIEGGHDPRRFVTDLLERLRDLVILAA 300 Query: 298 SPAA----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A L + A + RM+E AR+ ++ + G E+ A R+ +E+ Sbjct: 301 VPDAAEKGLIDAPADVVERMQEQARSFGAAELSRAADIVNEGLTEMRGAHSPRLQLELIC 360 Query: 354 LRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQV------------------------ 389 R + + Sbjct: 361 ARVMLPAAYGDERSVMARLDRIERGVQFSGGAGAPAMGYVPGPEAHAGAGAAAPVAAPVP 420 Query: 390 -----PPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNN 444 + Q A T P + ++ V A + Sbjct: 421 GGGPAAARAAVRGQGAGTPPGGDPSADVAAGAGDGAGAGTGPASDAGGAPPGGGHPQAAP 480 Query: 445 AALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHE 504 ++ + A P P+A W + P + P A Sbjct: 481 SSADVAPVPAPPSPATPSPAAAPAPAPASAPGAWPSAAPAGGGRRPGGWPTATPAGGGQP 540 Query: 505 KTPELAAKLAAEAIE------------------------RDPWAAQVSQLSLPKLVEQVA 540 +TP A A R W + + + + Sbjct: 541 RTPAAPASGPAATAAQAPAPAAAAPAPVSPPSGASGVDPRSLWPNILEAVKNRRRFTWIL 600 Query: 541 L--NAWKEESDNA-VCLHLRS--SQRHLNNRGAQQKLAEALSMLKGSTVELTIVED 591 L NA D + L + ++ + + G++ L +AL+ ++ V D Sbjct: 601 LSQNAQVTGFDGTSLQLGFVNAGARDNFVSSGSEDVLRQALAEQFNVQWKIDAVVD 656 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 137/441 (31%), Positives = 228/441 (51%), Gaps = 6/441 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M Y+ L R +RP +F +V GQ+H++ L N + +I HAYLF G RG GKTSIA++ AK Sbjct: 7 MGYKALYRTYRPNSFDEVAGQKHIVKTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFAK 66 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE+ PC CDNC ++ G D+IEIDAAS VE+ R+L++ V+YAP +G++ Sbjct: 67 VINCESKEH-KPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPLKGKY 125 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHM+S +FNALLKT+EEPPEHV F+LATT+P K+ TI+SRC +F + Sbjct: 126 KVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPK 185 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I ++ IL +EHI + ++L+A+ A+G LRDALS+ DQ IA + Q ++ + Sbjct: 186 NEIVSRIHTILEKEHIECDDDVIELIAQLADGGLRDALSILDQCIAYATNHIELQHINEI 245 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + + L + +M +++ +G++ L V+++ LL + + + Sbjct: 246 YGITTVQEKMKLFHHIFNNEPVDLMDMLDGMLEKGLDIPRLTVDLIELLKESIIFEYTKD 305 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + E + + L+ ++ +A + E+ LL + + Sbjct: 306 SSLLHSLSNEQAVEFITSK-SLKARFEMIHLLMDTYEKYRFASNVGSYFEVCLLEMINCN 364 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLP-ETTSQVLAARQQL 419 + E ++ + V ++ + Q ++ + T+ E + Q Sbjct: 365 G---ISELQIEKTEPKAVDAKKNVSRETLSNQNETINDERDTIETEFECDTAEEIFEQAS 421 Query: 420 QRVQGATKAKKSEPAAATRAR 440 + + K P Sbjct: 422 EEITVNEDKKGQAPIKPLDNE 442 >UniRef50_C6ABP2 DNA polymerase III subunits gamma and tau n=9 Tax=Alphaproteobacteria RepID=C6ABP2_BARGA Length = 646 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 177/643 (27%), Positives = 293/643 (45%), Gaps = 44/643 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGVCDN----CREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V D+ C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDSLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G V+ AV Sbjct: 189 IESKALSAHLRQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVNAIAV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFIMKGDVVNALHELRSQYEAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPILSRNWQMLLKGLQEVNQTARPLQAAEMLLIR 368 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 +P + + + + T V + + + V +S V Sbjct: 369 LAH-TADLPTLDEALKKLTQEKTPLTLVKNSSHQESTNANNITKETMVEA-HASSSVSNT 426 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 ++ + K + + VT+ ++ EK+ + Sbjct: 427 LPDQSDLKTSLKNQLDHSLQPENLVKNQTPDKINVQEVTETLENSQSIDLSEKSANLSRS 486 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 Q E + PK L H+ A L Sbjct: 487 VT--------QTTEKITQPKTLVINSLHDIVQLAEQHNDA---------------PFKLL 523 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 +++ + L L + ++K+++ TI + Sbjct: 524 IKEFVH--PVSFEAGHITLRLSENTPQFLAHDIEKKISQWTEK------RWTITFVNEGG 575 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDE 637 T E AI + + A D +I + F +A++ + Sbjct: 576 GPTLQEESIAIQKTLFSNA----ETDPDIAKILNHFPEAKIVD 614 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 268/545 (49%), Positives = 327/545 (60%), Gaps = 5/545 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRP+ F +V+GQ+HVL AL+N L GR+HHAYLFSGTRGVGKT+IAR+LAK Sbjct: 1 MAYQVLARKWRPRNFHEVMGQQHVLQALSNALDQGRLHHAYLFSGTRGVGKTTIARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCETGIT+ PCG C CREI+QG FVDL+EIDAASRTKVEDTRDLLDNVQY PARGRF Sbjct: 61 CLNCETGITSRPCGQCSACREIDQGNFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL Sbjct: 121 KIYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALTR 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQI QL+ +L E + +EP AL LLA+AA+GS+RDALSL+DQAIA G+G + + V M Sbjct: 181 EQIVEQLQRVLQAEQLTYEPAALSLLAKAAQGSMRDALSLSDQAIAYGNGLLQAETVQQM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGTLD Q ++ + +G +M I A +++ L VE+ LLHR AM QL Sbjct: 241 LGTLDHRQLYQILSLLAARDGAALMQQIGSLAELAPDYDQLHVELASLLHRTAMWQLLGQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A ++ LA IPP ++QLYYQ L GRKELP APD R +EMTLLR LAF Sbjct: 301 Q-TEPGADDTEELQLLAEQIPPEELQLYYQITLNGRKELPLAPDGRSALEMTLLRMLAFA 359 Query: 361 PRMPLPE-PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 PR P E P+ AP A T P A + LA + +L Sbjct: 360 PRAGRPAITEQPQLIHRNTAPAASFVATPARPDVIPAAVPVAPPVTASAAVEDLAMQAKL 419 Query: 420 QRVQG---ATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAY 476 + Q A ++ +P + PV A ++ Sbjct: 420 MQEQAELMAQAEQEMQPRPLPVSPPVTEAPAPVAVIPAVAPATPAASGPEVNNSGVQDII 479 Query: 477 RWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 R + +Q+ T + A+ + P ++A P Q P++ Sbjct: 480 RLRNQLRSRRQQAENQTESHVTPAVMPARIPANRGEIAPLPATAAPARTVAPQDVQPQVA 539 Query: 537 EQVAL 541 AL Sbjct: 540 GNRAL 544 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 100/285 (35%), Gaps = 3/285 (1%) Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + + + + Q A A +P L A Sbjct: 468 PEVNNSGVQDIIRLRNQLRSRRQQAENQTESHVTPAVMPA-RIPANRGEIAPLPATAAPA 526 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 R + + + L L + D+ + + A R Sbjct: 527 RTVAPQDVQPQVAGNRALSDDLPPWELPPLTAYQDQEAFISPVDSEQDNAAPSFKQRQSD 586 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAI-ERDPWAAQVSQLSLPKLVEQV 539 + + P + + E ++ + + + D WA V++L + V Q+ Sbjct: 587 RFTPSAPPVMQSNPAPVSRLPETDEDDDSVWRSNELLLRSSDQWAQTVAKLPVAGRVRQL 646 Query: 540 ALNAWKE-ESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRT 598 A+ A + ++ L +R+ RHL Q+LAEA+S + + + L + A+ Sbjct: 647 AMQAVVTDQQADSWHLQIRNEARHLAQPRMVQELAEAISTILPTAINLQVEPVVQLALPC 706 Query: 599 PLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 P E Q +A +++D N+Q L++ F A LD+ SI+P+ Sbjct: 707 PAEIEQQERIRLQQEAELLLLSDPNVQFLQQRFGATLDDGSIQPL 751 >UniRef50_A6GJ36 DNA polymerase III, gamma and tau subunits n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ36_9DELT Length = 747 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 189/731 (25%), Positives = 293/731 (40%), Gaps = 91/731 (12%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y LARK+RPQ FAD++GQEHV L N + R+HHAYLF G RG+GKT+ AR+LAK Sbjct: 1 MAYLALARKYRPQRFADMIGQEHVTRTLENAIKSDRVHHAYLFCGVRGLGKTTAARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 L CE G T PC C +C I +GR VD+IEID AS V+D R L D V Y P R Sbjct: 61 CLVCEHGPTPEPCNQCVHCVGINEGRSVDVIEIDGASNNSVDDIRSLRDQVHYLPQIARR 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHML++ +FNALLKTLEEPP HV FL ATTDP K+ TILSR + + + Sbjct: 121 KIYIIDEVHMLTQAAFNALLKTLEEPPPHVTFLFATTDPHKVLPTILSRVSRLDYRRVRA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--GDGQVSTQAVS 238 + L+ IL +E A EP L ++AR +GS+RD+L+L D+ IA ++ + V Sbjct: 181 ATLVPYLQFILEQEGFAVEPEGLYVIARCGDGSVRDSLTLLDKVIAFAHDPKAITGEEVL 240 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 +LG LV+A+++ + V+ + + G + L V +L L + ++ L+ Sbjct: 241 TVLGQASRYAVAELVQAILDRDAASVLQRFEQITSSGSDLMQLAVAILQHLRDLTVLSLT 300 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 + AL + + +++ A PT + ++ + ++ R+ +EM LL Sbjct: 301 KSRAALLDMNDDLFEQLQRQAGATSPTVVAQHFDRFARVVDSIEHSRVPRLVIEMGLLEL 360 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 ++ P MPL + + + PT + + P Q A+ Sbjct: 361 VSAEPLMPLGDLVTRLDALSKGRPTPRGGGGGGGGGRRGSGGGGGGRPRGPAPRQAAPAQ 420 Query: 417 Q---------------------------QLQRVQGATKAKKSEPAAATRARPVNNAALER 449 Q + + PA + + LER Sbjct: 421 AAPMRAGPPASAAPMPAPTPAPNPSPVVHRPPAQTQAPKRATAPAGGGGSGNASADMLER 480 Query: 450 LASVTDRVQARPVP----SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEK 505 +A + +P P + A ++ A ++ P P + Sbjct: 481 MAREAGLLGGKPEPAQARTPQRNAAPQRSAAAQRSAPPQSNAAPQRNAPPQYQDGPPPRD 540 Query: 506 TPELAAKLAAE---------AIERDPWAAQVSQLSLPKLVEQVALNAWKEES-------- 548 P A + A+ D + K + ++ Sbjct: 541 EPPWPVPAANDPRSPQGQGFALTNDRLRPVEPSSEVAKDPQAACPSSRCTPREPIQWRQL 600 Query: 549 ------------------------DNAVCLHLRSSQRHLNNRG---AQQKLAE------- 574 DN L L L A+ +L E Sbjct: 601 GSWDAWETFLSRVRQENDLLSAVLDNLGLLSLTEGHVELAAPANGFARTQLRENPEIEAA 660 Query: 575 ---ALSMLKGSTVELTIVEDDNPAVRTPLEW--RQAIYEEKLAQARESIIADNNIQTLRR 629 + G + L +V+ P + + Q + I+ L Sbjct: 661 FEALAAAYFGENMHLELVDIVPSLPDAPSMLLVYKERQRKHREQIEHDAHSHPRIRALLH 720 Query: 630 FFDAELDEESI 640 F E+++ I Sbjct: 721 AFGGEVEKVDI 731 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 150/601 (24%), Positives = 260/601 (43%), Gaps = 58/601 (9%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L +K+RPQTF +VGQ+ ++ L+N + RI HAYLF+G RG GKTS AR+ AK + Sbjct: 4 YEPLYQKYRPQTFDGLVGQKSIVLTLSNAIRSQRISHAYLFTGPRGTGKTSTARIFAKSI 63 Query: 63 NCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 NC + +PCG C+ C+ I +G +D+IEIDAAS T V++ R++++ ++AP + R+ Sbjct: 64 NCLASDAPSISPCGNCEACQTINKGSSLDVIEIDAASNTGVDNIREIIEQAKFAPMQLRY 123 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y++DE HMLS +FNALLK LEEPP+HV F+LATTDPQ++ TI+SRC +F + + + Sbjct: 124 KIYIVDECHMLSTAAFNALLKILEEPPKHVIFILATTDPQRVLPTIISRCQRFDYRRIAI 183 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E+I L I EE+I E AL L+A+ + G LRDA SL DQ G+++++ V+ + Sbjct: 184 EEIVQHLGKIAKEENINIEIDALNLVAKISNGGLRDAESLLDQLSLFT-GKINSEKVNDL 242 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + + LSL++A+ N + ++ + +G E +L + + + ++SP Sbjct: 243 VGLISERDLLSLLQAIRSNNSKLIIEFCGQLINKGKEPLTILQNIANFHLNLLISKVSPQ 302 Query: 301 --ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 L I + A I Q L +L + +E+ LL L Sbjct: 303 CPELTMISKDIWKELCIEAEFWKTDRILKNQQKLRNSEIQLKSTTQPYLWIEIILLDLLQ 362 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + + + + + + + P+ Q + Sbjct: 363 EEKEFSIDSNNLDIAA-------------------KFSSNKKLVIDDPKIEDQTKGNIKN 403 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478 L K ++ E Sbjct: 404 LVENSNNKKL------------------------------ITDDSRIEDQTKGNIENLVE 433 Query: 479 KATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS--LPKLV 536 + + + + ++ ++ + A W + L L L+ Sbjct: 434 NSNNKKLITDDSRIEDQTKGNIENLVESSSKSSVSTSNADLEGTWNLIIQNLPPFLAGLI 493 Query: 537 EQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAV 596 ++ + + SS + ++ A + G V +++ + P Sbjct: 494 KE--HGCLVSHKGRTATVGMSSSPLLELTKSKLSEIELAFEKVIGHKVTISLKVETKPKS 551 Query: 597 R 597 Sbjct: 552 S 552 >UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bacteria RepID=A4CK17_9FLAO Length = 631 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 162/651 (24%), Positives = 265/651 (40%), Gaps = 52/651 (7%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + V ARK+RPQ F DVVGQ+ + L N + + A LF G RGVGKT+ AR+LAK + Sbjct: 15 FIVSARKYRPQQFEDVVGQQAITRTLLNAIENDHLAQALLFCGPRGVGKTTCARILAKKI 74 Query: 63 NCETGITATPCGVCDNCREIEQGRFVD-------LIEIDAASRTKVEDTRDLLDNVQYAP 115 N E G D + E+DAAS V+D R+L+D V+ P Sbjct: 75 N-------------------EDGNQRDGEDFAFNIFELDAASNNSVDDIRNLIDQVRIPP 115 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 G++KVY+IDEVHMLS+ +FNA LKTLEEPP H F+LATT+ K+ TILSRC F Sbjct: 116 QVGKYKVYIIDEVHMLSQAAFNAFLKTLEEPPRHAIFILATTEKHKIIPTILSRCQIFDF 175 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 + + V L++I ++ I + AL ++A+ A+G++RDALS+ D+ ++ +++ + Sbjct: 176 RRITVGDAASYLKYIAEQQGIEADEEALHMIAQKADGAMRDALSIFDRVVSFAGNKLTRK 235 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV+ L LD D + +++ + ++ NE A+G E + + + + Sbjct: 236 AVAENLNVLDVDVYFESTDHILKGDIPALLIYFNEILAQGFEGHHYINGLASHFRDLMVC 295 Query: 296 QLSPA-ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 AL ++ R E A + + + + R+ VE+ L+ Sbjct: 296 TSQETVALLETSESVRQRYLEQASHCSGEFLLAALDLANQCDLDYKTSKNHRLLVELCLM 355 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 + + R P A Q PP + ++ + P + Sbjct: 356 KLASLTQRQKKKARNGEDAWLIPAAAFH----NQTPPPETVSEPESTSKPAAGAQEGAES 411 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + + + T++ E+ S ++ + E Sbjct: 412 SPETVGSAHQTTESIPESKDMPESKDIREPEGAEQSQSPDNQKETSAPAGPKETPAPTLP 471 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTP---ELAAKLAAEAIERDPWAAQVSQLS 531 + K+ V K KA H P +L E+ + W Q Sbjct: 472 VGKKKSGQKVSGLSLSSIRAKKAHKASRHHAAPNPEDLPRDPFEESELQALWKEFAEQTE 531 Query: 532 LPK---LVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLK-GSTVELT 587 L + + K D+ + + L +S Q +L + L ++L Sbjct: 532 KRGRKILAASLGTDLPKLIGDHVIWIELPNSTMKKEVERDQFELMDFLRTQLNNHHIQLK 591 Query: 588 IVEDDNPAVR---TPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 I ++ A + TP E Q + + I LR+ FD EL Sbjct: 592 ITVNEETAKQFAFTPEEKYQKLR-----------EKNPAIDLLRKTFDLEL 631 >UniRef50_D1S8R6 DNA polymerase III, subunits gamma and tau n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S8R6_9ACTO Length = 970 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 181/621 (29%), Positives = 270/621 (43%), Gaps = 24/621 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ L RK+RP+TFA+++GQE V L+ L GR++HAYLFSG RG GKTS AR+LA+ Sbjct: 1 MA-LALYRKYRPRTFAEMIGQEQVTEPLSQALRSGRLNHAYLFSGPRGCGKTSSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREI--EQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T PCG CD+CR + + G +D+IEIDAAS V+D R+L + +APAR Sbjct: 60 SLNCEQGPTPEPCGQCDSCRGLAPDGGGSIDVIEIDAASHGGVDDARELREKAFFAPARS 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y+IDE HM+S FNALLK +EEPPE+VKF+ ATT+P+K+ TI SR + + Sbjct: 120 RFKIYIIDEAHMVSSAGFNALLKLVEEPPEYVKFIFATTEPEKVLGTIKSRTHHYPFRLF 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAV 237 + +R LE + E + EP L+ RA GS+RD+LS+ DQ IA +G V Sbjct: 180 PPKVVRPYLEQLCEAEGVKVEPAVFPLVVRAGGGSMRDSLSVLDQLIAGAGPEGVGYARA 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +A+LG D + +A+ +G A ++ A G + ++L L + ++Q Sbjct: 240 AALLGVTDAALIDEMCDALAAGDGAAAYATVDRVAEAGHDSRRFASDLLERLRDLIVLQQ 299 Query: 298 SPAA----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A L + A RM A+ + P + + G E+ R+ +E+ Sbjct: 300 VPDAAARGLIDGPADQIERMAAQAQRLGPATLSRCADIVHNGLVEMRGTTAPRLLLELIC 359 Query: 354 LRALAFHPRMPLPEPEVPRQSFAP----------VAPTAVMTPTQVPPQPQSAPQQAPTV 403 R L + A PTQ +AP Sbjct: 360 ARMLLPGADDSSGGLLQRLERMERRLTLGGAELPPAAADPAHPTQTQGVRPAAPAPGAAA 419 Query: 404 PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVP 463 S A A +A + A A P + A D A P P Sbjct: 420 AAVHADSAGTPAAAGAPTGAAAARAAAAAAVGARNAAPGSRPAPAGTEPAGDPEAASPAP 479 Query: 464 SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE---- 519 +A E+A A A P + P A++ Sbjct: 480 AAPERAAVDPAASGSPAAASDAPAAARRPVPPSAVMPDPATPEPPRPGAANPGALDAVAV 539 Query: 520 RDPWAAQVSQLSLP-KLVEQVALNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALS 577 R W V +++ K + + +A + + + L ++S+ L +AL Sbjct: 540 RRVWPEVVGKVNRSNKRIAALMRDAVVRDLDGDTLVLTVKSTVLAKMMADHAAVLTDALY 599 Query: 578 MLKGSTVELTIVEDDNPAVRT 598 G ++ + Sbjct: 600 EELGGRWQIRCEVAGERGASS 620 >UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q609A7_METCA Length = 547 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 223/399 (55%), Positives = 279/399 (69%), Gaps = 2/399 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQ LARKWRP F +VVGQEHV+ AL + L GR+HHAYLF+GTRGVGKT++AR+LAK Sbjct: 1 MLYQALARKWRPHNFTEVVGQEHVVKALTHALEAGRMHHAYLFTGTRGVGKTTLARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE A PCG C CRE+++GRF+DLIE+DAASRTKVEDTRDLLDNVQYAP +GR+ Sbjct: 61 ALNCEDRQGANPCGRCLICREVDEGRFIDLIEVDAASRTKVEDTRDLLDNVQYAPNQGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLS HSFNALLKTLEEPP HVKFLLATTDPQK+PVT+LSRCLQF+LK L Sbjct: 121 KVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQFNLKRLTP 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 EQIR Q+ IL E I EP A + LARAA+GS+RD LSL DQAIA G+++ VSAM Sbjct: 181 EQIRAQMAQILASESIDFEPAATKALARAAQGSMRDGLSLLDQAIAHCGGRLTNTGVSAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LGT+ + +EA+ E+ + ++A+ A +++ ++ ++L +LH+IA+ Q +P Sbjct: 241 LGTVSREPVYGALEALAESRADELLAVSATLAEFSPDYQDVVQQLLAILHQIAIAQFAPD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+ D R+ LAR + P D QLYYQ L G+K+L APD R G EM LLR LAF Sbjct: 301 AIRQD--DEAERVLTLARCLTPEDTQLYYQIALQGQKDLQLAPDPRDGFEMLLLRMLAFR 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 P P + + AP T + P + + +Q Sbjct: 359 PHSAEAAPRIVPTAAAPAMRAPSDTGIREPHRAREVTRQ 397 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 2/182 (1%) Query: 463 PSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP 522 A + A +A + ++ A + + + Sbjct: 362 AEAAPRIVPTAAAPAMRAPSDTGIREPHRAREVTRQAPPPAAAEASSSGASPWTTSDALN 421 Query: 523 WAAQVSQLSLPKLVEQVALNAWK-EESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKG 581 W + + L + Q+A + +++A L L Q ++ L AL L G Sbjct: 422 WPRMIEAMRLAGMTRQLASHCVLRTLTEHACELALDPRQAQIHTPTVTSNLETALQKLLG 481 Query: 582 STVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIR 641 ++LTI ++ TP Q E+ +A I D + L+ F A++ S R Sbjct: 482 RPIKLTIR-CESLDAETPAAADQRAQIERQREAELEIENDATVHALKDMFGAQIVAGSTR 540 Query: 642 PI 643 P+ Sbjct: 541 PL 542 >UniRef50_A9IMY3 DNA polymerase III gamma and tau subunit n=2 Tax=Bartonella RepID=A9IMY3_BART1 Length = 646 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 177/643 (27%), Positives = 297/643 (46%), Gaps = 44/643 (6%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+VLARK+RPQ F+D++GQE ++ L N GRI A++ +G RGVGKT+ AR+LA+ Sbjct: 9 AYRVLARKYRPQNFSDLIGQEAMVRTLTNAFEKGRIAQAWMLTGIRGVGKTTTARILARA 68 Query: 62 LNCETGITATPCGV----CDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 LN +T P V ++C +I +GR +D+IE+DAAS T ++D R++++ ++Y P Sbjct: 69 LNYKTKDIDQPTTVLDTLGEHCTQIIEGRHIDVIEMDAASHTGIDDIREIIEQIRYRPVS 128 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R+KVY+IDEVHMLS +FN LLKTLEEPP HVKF+ ATT+ +K+P+TILSRC +F L+ Sbjct: 129 ARYKVYIIDEVHMLSTQAFNGLLKTLEEPPSHVKFIFATTEIRKVPITILSRCQRFDLRR 188 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 237 ++ + + L I E + E +AL ++ARAAEGS RDALS+ DQAIA +G VS V Sbjct: 189 IEAKALSAHLHQIAKYEKVEVEDQALSMIARAAEGSARDALSIFDQAIAHSNGNVSAAEV 248 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 MLG D + + L E +++ + + + G + +L E+ H + ++ Sbjct: 249 RTMLGLADQARIIDLFEFVMKGDVIHALHELRSQYDAGADPLTILTELADFNHLVTRLRF 308 Query: 298 SPAALGNDMAAIELRMREL--ARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 +P + + E R+R L ++ + + +Q LL G +E+ EM L+R Sbjct: 309 TPEIVEDFSLTEEQRLRSLDFSKKLSVPVLSRNWQMLLKGLQEVNQTARPLQATEMLLIR 368 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 +P + + + + T V + + Q T+ + ++S Sbjct: 369 LAH-TADLPTLDEALKKLTQEKTPLTLVTNSSHQEAISVNNITQETTIDVHASSSVSNTL 427 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 Q + +P +P N + + + + ++ +K A Sbjct: 428 PNQ------SDLKTSLQPPLDHSLKPENFVKNKTHDNAKAQEVIEILETSQSTDFSKNIA 481 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 + V Q E + PK L H+ S + L Sbjct: 482 ---NLSHSVTQPVEEITEPKTLVINSLHDIVKLAEQH---------------SDVPFKLL 523 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 V++ + L L + ++K+++ + + Sbjct: 524 VKEFVH--PVSFETGRITLRLSENTPQFLAHDIEKKISQWARKRY------VVTFVNEGG 575 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFF-DAELDE 637 T E AI + + A D +I + F +A++ + Sbjct: 576 GPTLQEESVAIQKTLFSHA----ETDPDIAKILNHFPEAKIVD 614 >UniRef50_C7I1D0 DNA polymerase III, subunits gamma and tau n=1 Tax=Thiomonas intermedia K12 RepID=C7I1D0_THIIN Length = 612 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 233/648 (35%), Positives = 323/648 (49%), Gaps = 50/648 (7%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ LARKWRP++FA +VGQ+HV+ AL + L R+HHAYLF+GTRGVGKT+++R+LAK Sbjct: 1 MTSVALARKWRPKSFASLVGQDHVVRALTHALDHDRLHHAYLFTGTRGVGKTTVSRILAK 60 Query: 61 GLNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP 115 LNC + G+T+ PCGVC C EI+ GRFVD IE+DAAS VED LL+ Y P Sbjct: 61 ALNCTGPDGQGGVTSQPCGVCPACTEIDAGRFVDYIELDAASNRGVEDMTTLLEQAVYKP 120 Query: 116 ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHL 175 GRFKVY+IDEVHMLS H+FNA+LKTLEEPP++VKF+LATTDPQK+PVT+LSRCLQF+L Sbjct: 121 TAGRFKVYMIDEVHMLSNHAFNAMLKTLEEPPDYVKFVLATTDPQKVPVTVLSRCLQFNL 180 Query: 176 KALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 235 K + I L+ +L E++ + AL+L+ARAA GS+RDALSLTDQA+A G+V T+ Sbjct: 181 KQMMPGAIVGHLQQVLQAENVPADDAALRLIARAAHGSMRDALSLTDQALAYCAGRVETE 240 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 AV MLGT+D L +++A+ +G ++ + ARG+ + A L E+ LL IA++ Sbjct: 241 AVQQMLGTVDRSDLLLILQALASQDGVALIHQADALEARGLSFGAALEELAALLQTIALL 300 Query: 296 QLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 QL P A D + LA + P +QL Y T+L GR EL APD R G MTLLR Sbjct: 301 QLVPQAADADDP-QHEALVALAAQLSPELVQLAYTTVLHGRNELSLAPDDRTGFTMTLLR 359 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 LAF P + P +P A LP+ + Sbjct: 360 LLAFAPVIAGSVPSLPPGGLA----------------------------LPKAAAPASPP 391 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 Q A + + + +A A PV +A E A Sbjct: 392 SQSAAAQVAAQREQPATKSATPVQTAAKAMPRTAATLSAPLAPAAPVLAAEEAPATSYAA 451 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 T P L+ + + + A Q L + Sbjct: 452 KPEPQTQPQPTPPRPADIKPPLQITPHIASDTDWPTLVQRLDVPAGLPRALAQQSELVAM 511 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 L + + Q L G+ KL A+ + G + L + Sbjct: 512 ------------QGMDWLLRVPNEQ--LTRAGSLDKLQTAVRLALGQDIVLRAEAGEVT- 556 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI 643 + ++ + A A +I D +Q L A++ S++P+ Sbjct: 557 -DSVMQRDARAKAQAQADAEAAIRNDPLVQQLMHDLGAQIVPGSLKPM 603 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 162/414 (39%), Positives = 232/414 (56%), Gaps = 8/414 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L K+RPQ FAD+VGQE + L+ L+ RI AYLF+G RG GKTS AR+LAK Sbjct: 1 MAYEPLHHKYRPQCFADLVGQEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAK 60 Query: 61 GLNCETG--ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNC+ TA+PCG C+ CR I +G +D+IEIDAAS T V++ R+L++ Q+AP + Sbjct: 61 SLNCQQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFAPVQC 120 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFKVY+IDE HMLS +FNALLKTLEEPP+ V F+LATTDPQ++ TI+SRC +F + + Sbjct: 121 RFKVYVIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFDFRRI 180 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVS 238 ++ + L+ I +E I EP A+ L+A+ A+G LRDA SL DQ + V+ +AV Sbjct: 181 PLQAMTDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQ-LGLLPPPVTPEAVW 239 Query: 239 AMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLS 298 +LG + + Q L L+EA+ + E ++ LI + RG E +L + + + + + Sbjct: 240 DLLGAVPERQLLQLLEAIAANDPEALLTLIRQLLDRGREPLTVLQNLTAFSRDLLIARTA 299 Query: 299 PA--ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 P L A + A P I Q L ++ R+ +E+ LL Sbjct: 300 PQRRDLTTVTEATWQELCTFAEDWTPEQILQLQQHLRQSELQIKNTTQPRLWLEVALLGL 359 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 L P P P APV + VP + S+P V +P + Sbjct: 360 L---PSAQAPVTTAPPAIAAPVTRPVSIPAAVVPAETPSSPAAVAPVAIPVAPA 410 >UniRef50_A4XJ39 DNA polymerase III, subunits gamma and tau n=2 Tax=Clostridia RepID=A4XJ39_CALS8 Length = 535 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 226/454 (49%), Gaps = 2/454 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + L RK+RP+ F DVV QEH+ L N + ++ HAY+F+G RG GKT+ A+++A+ + Sbjct: 2 HIALYRKYRPKVFEDVVAQEHITKTLKNQIKQDKVAHAYIFTGPRGTGKTTTAKIMARAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PC C+ C+ I + +D++EIDAAS T V D R + D V+Y P+ + +V Sbjct: 62 NCLNPKDGNPCNECEVCQSILNEKTLDVLEIDAASNTSVNDVRQIRDEVRYPPSMCKRRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP H F+LATTD QK+P TILSRC +F K + V+ Sbjct: 122 YIIDEVHMLSTGAFNALLKTLEEPPAHALFILATTDIQKVPATILSRCQRFDFKRISVKD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L+ ++ E I+ + +AL L+++ AEG+LRDAL++ ++ + + D +S + V+ +LG Sbjct: 182 IYERLKKVVELEKISIDDQALYLISQKAEGALRDALTILERCVNTSDEHISYKFVANLLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + A+VE + + + ++N G++ L E + +L +++L + Sbjct: 242 VTSTEIVKEYLNAIVENDSNKGLRVVNRLWDEGMDVNTFLEESIKILRNALILRLGAQNV 301 Query: 303 GNDMAAIELRM-RELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 DM + L+ + I + L+ ++ + ++ +E+ ++ Sbjct: 302 LLDMMDEDKSFVTNLSNLLDSNRIVSVIKMLIDTANQIRWTRFPKVLLEINTIKLCDMQM 361 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 + + P+ + + + E + ++++ Sbjct: 362 DTSFEGLNERVKKLEIKLSQILENPSLLQSLKT-EKTLSLSTAAGEKSGSSEVNKEKMLL 420 Query: 422 VQGATKAKKSEPAAATRARPVNNAALERLASVTD 455 A A L ++ Sbjct: 421 PDADVSEVLERWAEVKEAVKEEKPGLSQVLQSAS 454 >UniRef50_Q0RT17 DNA polymerase III subunit gamma (Partial match) n=3 Tax=Frankia RepID=Q0RT17_FRAAA Length = 1016 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 155/477 (32%), Positives = 224/477 (46%), Gaps = 10/477 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RP TFA VVGQEHV AL L GR+HHAYLFSG RG GKTS AR+LA Sbjct: 1 MS-TALYNRYRPATFAQVVGQEHVTDALRKALRTGRLHHAYLFSGPRGCGKTSSARILAA 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVCD C I G +D+ EIDAAS V+D RDL + +APA RF Sbjct: 60 SLNCEQGPTPEPCGVCDECVGIRTGASMDVTEIDAASHGLVDDARDLRERAFFAPASARF 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DE HM++ +FNALLK +EEPP ++KF+ ATT+P K+ TI SR + + + Sbjct: 120 KVFVVDEAHMVTAAAFNALLKVVEEPPPYLKFVFATTEPDKVIPTIRSRTHHYAFRLVPP 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 +R L I +E + +P L L+ RA GS+RD+LS+ DQ +A + D + A Sbjct: 180 GVLRTHLASICEQEGVTVDPTVLPLVVRAGAGSVRDSLSVLDQLLAGADDDGLHYDRAVA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D V+A+ +G + ++++ + G + ++L L + ++ P Sbjct: 240 LLGMTDGVLLDETVDALARHDGAALFTVVDKVVSAGHDPRRFATDLLDRLRDLIIMAAVP 299 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A L + RMR A + P ++ L G E+ R+ +E+ L Sbjct: 300 DADARGLLESFSPDQIDRMRAQAAAVGPAELSRTADVLHGGLVEMRGTTSPRLMLELILA 359 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 RAL P + +V+ ++ P ++ Sbjct: 360 RALLPAASAD---PAALLTRLERLERRSVLAAPDSAAAHPASAPGFGPDPAAGSSPFGGV 416 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPA 471 R A A A P A + P + + AP Sbjct: 417 NGPDGPRGMPGPPGPDEAAAPARTASPARPAPAHSARAAAAPASQGPASGSWDAAPV 473 >UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 Tax=Actinomycetales RepID=C7Q5N1_CATAD Length = 863 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 160/557 (28%), Positives = 230/557 (41%), Gaps = 22/557 (3%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 L R++RP+TF +VVGQEHV L L GR++HAYLFSG RG GKT+ AR+LA+ LN Sbjct: 20 LALYRRYRPETFEEVVGQEHVTLPLQQALRNGRVNHAYLFSGPRGCGKTTSARILARCLN 79 Query: 64 CETGITATPCGVCDNCREIEQGRF--VDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 CE G T TPCG C +C E+ G +D+IEIDAAS V+D RDL + +APA RFK Sbjct: 80 CEQGPTPTPCGTCRSCVELANGGSGSIDVIEIDAASHGGVDDARDLRERAFFAPAASRFK 139 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDE HM++ FNALLK +EEPP H+KF+ ATT+P+K+ TI SR + + + Sbjct: 140 IYIIDEAHMVTSAGFNALLKVVEEPPPHLKFIFATTEPEKVIGTIRSRTHHYPFRLIPPG 199 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAM 240 +R L I E I EP L L+ RA GS RDA+S+ DQ +A D V+ + + Sbjct: 200 VLREHLNDITAREGIKVEPEVLPLVVRAGAGSARDAMSVLDQLLAGADENGVTYAMATGL 259 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D LVEA +G V L+++ G + L ++L + ++ Sbjct: 260 LGYTDAALLDRLVEAFAGNDGAAVFGLVDQVVESGHDPRRFLTDLLERFRDLVVLNAVTD 319 Query: 301 -----ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 AL + RM AR+ +++ + G E+ A R+ +E+ R Sbjct: 320 AGAARALIDVPDDQFERMAGQARSFGASELSRAADLVNTGLTEMRGATAPRLLLELVCAR 379 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQ-------QAPTVPLPET 408 L S P+ + P Sbjct: 380 VLLPGADDAERGLVARVDRLERRGVVLGAAAPAPMAPMGSGPRVVEDEYDEPPVRRPSAA 439 Query: 409 TSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPS---- 464 + A+ G + AT + E+ + Sbjct: 440 GAGAGASVPAGSVPSGGNPQNAPDNQQATGGGSLGTPPWEQGGGPSAANSGGGAEQSAAN 499 Query: 465 ---ALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERD 521 A A W+ A A E + + AA + Sbjct: 500 SGGAPNPAAGPLGTPPWEQGAGAPAAANANANANNNANANAPEPSSTGSGPAAATSQGAL 559 Query: 522 PWAAQVSQLSLPKLVEQ 538 S +Q Sbjct: 560 GTPPWESGAPNAGASQQ 576 >UniRef50_Q1Q394 Similar to DNA polymerase III subunit gamma/tau n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q394_9BACT Length = 558 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 138/423 (32%), Positives = 217/423 (51%), Gaps = 1/423 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLAR++RPQTF+D+VGQ ++ L N + R+ HAYLF+G RGVGKTS AR+L+K Sbjct: 1 MSYVVLARRYRPQTFSDIVGQAPIVKTLGNAIRTDRVAHAYLFAGPRGVGKTSTARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G T TPC VC+ C+ I +G +D++EID AS +++ R++ NV +AP+R R+ Sbjct: 61 ALNCVNGPTDTPCNVCNICQSISEGSDIDVLEIDGASNRGIDEIRNIRQNVGFAPSRARY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 ++Y+IDEVHML+R +FNALLKTLEEPP HVKF+ ATT +LP T+ SRC +F K + V Sbjct: 121 RIYIIDEVHMLTREAFNALLKTLEEPPSHVKFIFATTAANRLPETVQSRCQRFDFKNISV 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I L I E E AL +A+ A+G LRD+ S+ DQ + D V++ V+ + Sbjct: 181 NDIEKHLLEICKTEGKQIESAALHTIAKYAKGGLRDSQSVLDQLFSFCDDNVTSADVNYV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG +DDD+ S+ E V + + ++++ G + ++L L + + Sbjct: 241 LGYIDDDKIYSMFECFVNKDTSGALRIVDDILNEGKTPAEFIDQLLLRLRDLLVFSSCGQ 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 ++ ++ + Q L + R + +R+ EM +++ Sbjct: 301 EAVWAEYDES-FIQRFEKSFSGDTLMYMIQMLSVMRIRSTDSLLQRISAEMAIIKLCRME 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 L + P + + + E + + + Sbjct: 360 SIGALSGLIERITTLEEKLEQVDNIPGKRGSAILLPAESFARQTVSEKSIEEGDVIPPAK 419 Query: 421 RVQ 423 + Sbjct: 420 EEK 422 >UniRef50_C1SKL9 DNA polymerase III, subunit gamma/tau n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKL9_9BACT Length = 534 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 137/399 (34%), Positives = 212/399 (53%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARK RPQ F ++ GQE V+T L N + +GR+ HAYLF+G RGVGKTS AR+LAK Sbjct: 1 MSYIALARKLRPQNFDELSGQEFVVTTLKNSIEMGRVAHAYLFTGPRGVGKTSAARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + + PC C+NC EI G +D++EID AS +++ R+L + V++ P + +F Sbjct: 61 AVNCLEPVGSNPCNKCENCTEITSGTSMDVVEIDGASNRGIDEIRELREAVRFLPVKCKF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNALLKTLEEPP++V F+LATTDPQ+LP TI+SRC ++ + Sbjct: 121 KVYIIDEVHMLTEHAFNALLKTLEEPPDYVMFILATTDPQRLPATIISRCQKYDFNKIPF 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E + L ++ E I ++ AL L+ R ++G +RD+LSL DQ IA G++ Q+ S + Sbjct: 181 EIMYDSLAGAMDTEGIEYDKDALNLVVRNSDGCMRDSLSLLDQIIAFTGGKLDEQSTSFL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + L +++ E + I E + +G+ + ++G + M ++ Sbjct: 241 LGFSEKSLVDKLFALIIKEQPEEIPDAIEELSGKGVNFAFATETLIGHTRNLLMQLITKK 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + +EL + + +Q +L + + E + +A Sbjct: 301 ENKELTSKENDYYKELVKNTSEQQLYALFQVFQKLLNDLKFFSFEQYIFEFGMYKAANIG 360 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQ 399 + S V P + Sbjct: 361 SVISSKGLASQTSSDTTGRAATVKKPVAETSSKPTLSST 399 Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 4/161 (2%) Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA 540 ++ + + T + L++ +E + V Q L + Sbjct: 364 SSKGLASQTSSDTTGRAATVKKPVAETSSKPTLSSTDLEMQNIISAVEQEIPGSLSSMLG 423 Query: 541 LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALS----MLKGSTVELTIVEDDNPAV 596 +D + + S ++ + + + +AL+ S ++ V + + Sbjct: 424 HGYIVHIADKVLTIGFSSEKKFYFDFVNRAQNMQALNRIIPAAFNSIDQVKTVIEQDTKK 483 Query: 597 RTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 ++ +E +Q I + R+ D +Q + R FD +L++ Sbjct: 484 KSIVEKKQTIETFHEKKIRQEAKEDGLVQKIIREFDGKLED 524 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 144/408 (35%), Positives = 220/408 (53%), Gaps = 9/408 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L RK+RP F++++GQ H+ + N L L + HAY+F+G RG GKT+IA+L+A L Sbjct: 2 YQALYRKYRPTNFSELIGQNHIKQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIATSL 61 Query: 63 NCET-GITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NCE+ PC C C+ I D++EIDAAS VE R++ + V YAP G++K Sbjct: 62 NCESLNNEGEPCNECSQCKAIRGNSHADVLEIDAASNNGVEQIREIREQVAYAPGTGKYK 121 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVHMLS +FNALLKTLEEPP+HV F+LATTD K+P TI+SRC +F + + Sbjct: 122 VYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTDVHKIPATIISRCQRFDFRRIGPR 181 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAM 240 I +L H+ +E + E ALQLL A+G +RDALSL DQ IA + ++ VS + Sbjct: 182 DIIERLRHVAIKEEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFATNETITKDDVSEV 241 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 +G + ++ + + +++ N ++ LIN+ G E LL +++G L + + + Sbjct: 242 VGRISIEKIEACIGDLLKGNTIEILNLINQVILNGKEPIYLLEDLIGYLRDLVISKAFEV 301 Query: 301 ALGNDMAAIEL-RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 N AI + EL +Q+ + L + E+ ++ + ++ +E+ L++ Sbjct: 302 KEDNITTAILNSKFYELLEEGEIHKMQMMIRKLTEVKNEMKFSNNAQVSLEVGLIQLAT- 360 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPE 407 + E V T P +PTV P Sbjct: 361 -----EAQEENRLIKKINELEKRVRELTSSGSVPVRPKSFSPTVQQPA 403 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 150/416 (36%), Positives = 220/416 (52%), Gaps = 4/416 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQ L R+WRPQ FAD+VGQ+HV L N L R+ HAYLF G RG GKTS A++LAK + Sbjct: 2 YQALYRQWRPQFFADMVGQQHVARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILAKAI 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NCE G + PC C CR I+ GR +D+ EIDAAS +++ R+L + +Y+P R KV Sbjct: 62 NCEKGPSREPCNECAACRGIQAGRVMDVQEIDAASNRGIDEIRELREKARYSPVEVRHKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y++DEVHML++ +FNALLKTLEEPP V F+LATT+P KLP TI+SRC + + + Sbjct: 122 YIVDEVHMLTQEAFNALLKTLEEPPGRVLFVLATTEPHKLPATIISRCQRLDFHLIGMTD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I +L ++++ + + AL L+A A G LRDALSL +Q +A +G +S + V A+LG Sbjct: 182 IAERLRSVVDDSGRSIQDDALYLIAEEAAGGLRDALSLLEQIMAYSEGNISDEDVLAVLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + D ++++ + + L+ E AA G + + + + + Sbjct: 242 AVGRDVYYRFTDSLLRRDLAAALLLLQEVAAGGKDLHHFTRQAISYYRDLMVALTCGDDA 301 Query: 303 GN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 R+ + AR + I L E+ +A R+ E+ + R +A Sbjct: 302 VALGIAPDWAGRLHKQARQLGMGTIGHILSELHGLLNEVRWASRPRLLWELAIFRIMA-- 359 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAAR 416 P+ + E+P A V P + P Q Q+ P ET S R Sbjct: 360 PQAEDRQQELPVSKPADVKPDNTPVVKETPAQNSFPEQKRAAEPAGETASIENLPR 415 Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 28/190 (14%) Query: 456 RVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 R+ A ++ P K A TPV+++ + K+A E A + A+ Sbjct: 356 RIMAPQAEDRQQELPVSKPADVKPDNTPVVKETPAQNSFPEQKRAA------EPAGETAS 409 Query: 516 EAIERDPWAAQVS--QLSLPKLVEQVALNAWKEESDNAVCLHLRSSQ--RHLNNRGAQQK 571 W + + K + + + L + + ++ Sbjct: 410 IENLPRLWPRVLELVRKESVKTHALLLSGEVSSCDEKVLELQFSGPFHCEMMESAENRRS 469 Query: 572 LAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADN--NIQTLRR 629 L + L + + V N + +Q EEK D I + Sbjct: 470 LQKVLKKVFAVEPAIRCVVGKNGS------LQQQQPEEK----------DPAELISSAVE 513 Query: 630 FFDAELDEES 639 F + +ES Sbjct: 514 IFGGRVIDES 523 >UniRef50_B5EJD9 DNA polymerase III, subunits gamma and tau n=3 Tax=Acidithiobacillus RepID=B5EJD9_ACIF5 Length = 572 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 234/477 (49%), Positives = 295/477 (61%), Gaps = 7/477 (1%) Query: 1 MS-YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 59 MS Y LAR+WRPQ F D VGQE V++AL + L GRIHHA+LF+GTRGVGKT++ARLLA Sbjct: 1 MSAYLALARRWRPQHFDDFVGQEAVVSALRHALDSGRIHHAFLFTGTRGVGKTTLARLLA 60 Query: 60 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 K LNCE G+++ PCG C CR I G FVDL+E+DAASRT+V++TRDLLDNVQYAP GR Sbjct: 61 KCLNCERGVSSNPCGECSACRSIAAGNFVDLLEVDAASRTRVDETRDLLDNVQYAPTAGR 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K YLIDEVHMLS HSFNALLKTLEEPPEHVKFLLATTDPQKLP+T+LSRCLQF+L+ LD Sbjct: 121 YKAYLIDEVHMLSAHSFNALLKTLEEPPEHVKFLLATTDPQKLPITVLSRCLQFNLRRLD 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 V QI+ +L I++ E + E ALQ+L+RAA+GSLRDALSL DQAI G G V V A Sbjct: 181 VPQIQGRLRQIMSLEQVPAEDAALQILSRAADGSLRDALSLLDQAIVHGGGAVRRDGVLA 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 MLG DD L L+ A+V+ + +V A++ + ARG++ LL ++ LHRIA+ Q P Sbjct: 241 MLGRSGDDAVLGLIAALVDRDAAQVFAIVGDHLARGMDGPGLLDLVIEGLHRIALAQFLP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A +D A + +R I P +Q +Y LL R++ PD RM +EM LR L+F Sbjct: 301 ADPDDDGAEAVVHLR---GRISPLTLQSWYFLLLSARRDFALYPDDRMALEMAFLRVLSF 357 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSA-PQQAPTVPLPETTSQVLAARQQ 418 P P + PT+ P++ P +VPL S+ Sbjct: 358 SGSASPDSPPAALPGGENRHPGESLPPTREFVMPEATSPLSDHSVPLLSIRSRDEVREPS 417 Query: 419 LQRVQGATKA-KKSEPAAATRARPVNNAALERLASVTDRVQA-RPVPSALEKAPAKK 473 G A + PAA R + A +A QA R P A+E A Sbjct: 418 PVATSGQRDADAGTAPAADWRRVLASLAVSPMIAEYLRYGQALRCDPEAVELAVEPN 474 >UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Tax=Cyanobacteria RepID=B1WS93_CYAA5 Length = 683 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 162/436 (37%), Positives = 234/436 (53%), Gaps = 15/436 (3%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 SY+ L K+RPQTFAD+VGQE + T L+N ++ RI AYLF+G RG GKTS AR+LAK Sbjct: 3 SYEPLHHKYRPQTFADLVGQEAIATTLSNAIASQRIAPAYLFTGPRGTGKTSSARILAKS 62 Query: 62 LNCE--TGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNC TA+PCG C+ CR I +G +D+IEIDAAS T V++ R++++ Q+AP + R Sbjct: 63 LNCLAVKVPTASPCGQCEVCRAIARGSALDVIEIDAASNTGVDNIREIIERSQFAPVQCR 122 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +KVY+IDE HMLS +FNALLKTLEEPPE V F+LATTDPQ++ TI+SRC +F + + Sbjct: 123 YKVYVIDECHMLSVAAFNALLKTLEEPPERVIFVLATTDPQRVLPTIISRCQRFDYRRIP 182 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSA 239 +E + L I +E+I E AL L+A+ A G LRDA SL DQ G ++ + V Sbjct: 183 LEAMVEHLTIIAQKENIEIEAEALTLVAQIANGGLRDAESLLDQLSLLSGG-ITPEKVWD 241 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 ++G + + LSL++A+ N E V+ + RG E +L + + + + +P Sbjct: 242 LVGAVPERDLLSLLKAINSNNPELVIESCRKLMDRGREPLVVLQNLAAFYLNLLIAKTAP 301 Query: 300 --AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + L + + A I Q L +L R+ +E+TLL L Sbjct: 302 TRSDLVAVTSTTWDDLCTEAEQWQTETILRGQQKLKESEVQLKNTTQPRLWLEVTLLGLL 361 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 P + E V + +P++ PQQ + E +SQ Q Sbjct: 362 ---PDACIAEVIVQSSNI-----PTQTKNNNNESKPKALPQQKTQSNIVEKSSQ--DKIQ 411 Query: 418 QLQRVQGATKAKKSEP 433 L + + P Sbjct: 412 PLSKPNQSVTKTSETP 427 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 143/460 (31%), Positives = 237/460 (51%), Gaps = 11/460 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+Y+ L R++RPQ FA+++GQ H++ L N L RI HAYLF G RG GKTS A++LAK Sbjct: 1 MAYRALYREYRPQLFAEIMGQRHIVDTLENALKNNRIAHAYLFCGPRGTGKTSTAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC C +C + QG +D+IEIDAAS +++ RDL + V++AP G++ Sbjct: 61 ALNCHQIKGVEPCNKCSSCVSVAQGSAIDVIEIDAASNRGIDEIRDLKERVKFAPTGGKY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY++DEVHML+ +FNALLKTLEEPPEHV F+LATT+P KLP+TILSRC +F K++ Sbjct: 121 KVYIVDEVHMLTIEAFNALLKTLEEPPEHVIFVLATTEPHKLPLTILSRCQRFDFKSIGA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD-GQVSTQAVSA 239 E + +L+ IL + + P AL+L+ +AAEG LRDALS+ DQ I + ++S + + Sbjct: 181 EPMTSRLKDILQDLQVKISPAALELIVQAAEGGLRDALSILDQIITFNNTAEISEEDIHN 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LGT+++ SL+E ++ + + +I E G + + + + + + + P Sbjct: 241 LLGTVNERVINSLLEYLLRGDAGSSLQVIAEIFLEGKDLKMFVKGFASCVRDLLLQSIEP 300 Query: 300 AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 A+ N + + L ++ ++ R+ +E+ L++ + Sbjct: 301 TAIKNFSRTD--------QIYSVEYLLALLDCLTELEPKMKFSSQPRVILELALIKFIYS 352 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 L + + + M + A Q + S+++ + Sbjct: 353 RRDHLL--QSINTKESTEIQNNQDMRVSLPSEVKLPADDQEKLLAENTDNSKLVKSYDLP 410 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 + + S + V + + ++ + Sbjct: 411 VAEKNEQRDNISINRVKNSWKLVLEEIRKAMPAIAVPLSD 450 >UniRef50_C2GJF4 DNA polymerase III subunits gamma and tau n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GJF4_9CORY Length = 796 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 162/611 (26%), Positives = 273/611 (44%), Gaps = 19/611 (3%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L K+RP TFA+V GQEHV L+ L G I HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYHKYRPATFAEVRGQEHVTRPLSVALDSGNIGHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 E G T+TPCG CD+CR + G +D+ E+DAAS V+D R+L ++ +AP+ R+++ Sbjct: 62 EHGPTSTPCGECDSCRALAPGGTGNLDVTELDAASHGSVDDMRELRESAVFAPSESRYRI 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM++ NALLK +EEPPEH+ F+ ATT+P+K+ TI SR + + L Sbjct: 122 FIIDEAHMITPQGANALLKIVEEPPEHLVFIFATTEPEKIIGTIRSRVQHYPFRLLTPPV 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS--GDGQVSTQAVSAM 240 +R L+ + E + E L+ RA GS RD LS+ DQ +A ++S + + + Sbjct: 182 MRGLLQDVCAGEGVEVEDSVFTLVIRAGGGSPRDTLSILDQLLAGVPAGEKLSYELAAPL 241 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D S V + + +L+ + RGI+ + ++L + ++Q P Sbjct: 242 LGVTDSTLLDSAVRVIATHDAPGAFSLVGQVIDRGIDPKRFTSDLLDRFRDLMVLQAVPD 301 Query: 301 ALGNDMAAIE----LRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRA 356 AL + + + E + + + G +++ R+ +E+ + R Sbjct: 302 ALSSGLVDAPSLLHSELTEEVQLFSGQGLPQITALVNTGLEDMRGTLAPRILLEVLMARL 361 Query: 357 LAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQ---VPPQPQSAPQQAPTVPLPETTSQVL 413 L+ P+ +P + AP AP V + Q +A QA P+ S Sbjct: 362 LSVGTGAPVIDPASSPAALAPPAPEQVSEAGKKYLRRSQRPTAQPQAQQPVQPQQQSAPS 421 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 A ++ Q Q + S+P + S P ++ Sbjct: 422 APVEEKQPRQYQEYGQPSQPEQRPAQPQAQQPVQPQQQSAPSAPAEEKQPRQYQEYGQPS 481 Query: 474 EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 + + + P ++Q+ + ++ + PE + R W ++ +S Sbjct: 482 QPEQEEHEVPELRQQWEAGRDEQPQQVESAPQEPETS--TVDVETVRAKWVDILNYISRE 539 Query: 534 K---LVEQVALNA-WKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELT 587 K + A + D + L + + LN+ + +A+ +++ + Sbjct: 540 KKNTTARILLRGATLLDVRDGTLYLGILTGAIANRLNDAKHNADIVDAVKAETNASLAVE 599 Query: 588 IVEDDNPAVRT 598 V + T Sbjct: 600 CVLGNKIPAST 610 >UniRef50_Q5X1E1 DNA polymerase III, gamma and tau subunits n=6 Tax=Legionella RepID=Q5X1E1_LEGPA Length = 556 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 225/558 (40%), Positives = 306/558 (54%), Gaps = 11/558 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY LARKWRP+TF+ +VGQEH+ AL N L+ R+HHAYLF+GTRGVGKTS+AR+LAK Sbjct: 1 MSYLALARKWRPRTFSQLVGQEHINKALINALNQQRLHHAYLFTGTRGVGKTSVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC CD C IEQGR++DLIEID AS+T+VEDTRDLLDN+QYAP GRF Sbjct: 61 ALNCEKGITSEPCLHCDTCVAIEQGRYIDLIEIDGASKTRVEDTRDLLDNIQYAPTNGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS+HSFNALLKTLEEPP HVKF+LATTDPQKLPVT+LSRCLQF+LK L Sbjct: 121 KIYLIDEVHMLSQHSFNALLKTLEEPPSHVKFILATTDPQKLPVTVLSRCLQFNLKHLPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I QL+ IL EE + E +AL +LA+AA GS+RDALSL DQAI S + ++ V + Sbjct: 181 ELINQQLQLILQEERLDFEIQALDILAQAARGSMRDALSLLDQAITSCETKLLASDVKIL 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D AL L++A+ + ++ L + A G ++ +L EML LH+I + Q Sbjct: 241 LGHTQQDYALLLLQALAKQEAPTMLVLSQQIIAEGGNFQYVLDEMLNYLHQITIYQCLGD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + ++ELA+ D QL+YQ + GR+E+ AP +G MT+LR F Sbjct: 301 NNPLISP--KAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYTFK 358 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P + P + + + T P P +P+ + T ++A Q Sbjct: 359 PASHVTTPPLAFEQNNKTCSLIIDDNT-----PAQNPIGIEPIPVTKATGNIVAYHQTQS 413 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 K+ S + + ++ A + + + Sbjct: 414 LSTDDKKSANSGESMNCDWNDIIPQLKLSGLALNAIENAEFLGKKEREITLGVQKGHQSL 473 Query: 481 TTPVMQQKEVVATP----KALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV 536 TP + A +K L + + E ++ + L + Sbjct: 474 FTPTTINRIETALAGYYKSPVKITLNSQDAVHASPAQQKEKATQEKQEQAEAALHADPVF 533 Query: 537 EQVALNAWKEESDNAVCL 554 +Q+ E N++ L Sbjct: 534 QQLKQEFSAELVKNSIVL 551 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 85/248 (34%), Gaps = 5/248 (2%) Query: 397 PQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDR 456 P +P + E Q A QL G ++ A Sbjct: 303 PLISPKAEIKELAKQFSAEDTQLFYQIGIKGREEMHLAPTLAIGFNMTMLRMYTFKPASH 362 Query: 457 VQARPVP-SALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAA 515 V P+ K + A P+ + V A ++ K +A Sbjct: 363 VTTPPLAFEQNNKTCSLIIDDNTPAQNPIGIEPIPVTKATGNIVAYHQTQSLSTDDKKSA 422 Query: 516 EAIERDP--WAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQQKL 572 + E W + QL L L NA + + + + L ++ + L ++ Sbjct: 423 NSGESMNCDWNDIIPQLKLSGLALNAIENAEFLGKKEREITLGVQKGHQSLFTPTTINRI 482 Query: 573 AEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFD 632 AL+ S V++T+ + +P + ++ +EK QA ++ AD Q L++ F Sbjct: 483 ETALAGYYKSPVKITLN-SQDAVHASPAQQKEKATQEKQEQAEAALHADPVFQQLKQEFS 541 Query: 633 AELDEESI 640 AEL + SI Sbjct: 542 AELVKNSI 549 >UniRef50_A1WTL4 DNA polymerase III, subunits gamma and tau n=6 Tax=Gammaproteobacteria RepID=A1WTL4_HALHL Length = 554 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 219/372 (58%), Positives = 268/372 (72%), Gaps = 1/372 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ LARKWRP+ F DV GQEHVL ALAN L+ GR+HHAYLFSGTRGVGKT++AR+LAK Sbjct: 1 MTYQALARKWRPRRFEDVAGQEHVLRALANALADGRLHHAYLFSGTRGVGKTTVARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GITA PCG CD+CRE++ GRFVDLIE+DAASRTKVEDTR+LLDNVQYAP RGRF Sbjct: 61 CLNCEHGITAEPCGTCDSCRELDAGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+YLIDEVHMLS HSFNALLKTLEEPP+HVKFLLATTDPQKLPVT+LSRCLQFHL+ L Sbjct: 121 KIYLIDEVHMLSSHSFNALLKTLEEPPDHVKFLLATTDPQKLPVTVLSRCLQFHLRRLSS 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 IR +L + EE + + A LARAA+GSLRDALSL DQA+A G+G V+AM Sbjct: 181 TLIRDRLLALAEEEGVTVDAGAAARLARAADGSLRDALSLLDQALAFGEGAARDDEVAAM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG ++ L ++ A+ + +G ++ A +++ L E++ +H +A+ Q P+ Sbjct: 241 LGAIERRHVLEVLTALADGDGAALVTAARHMAEVAADFDEALAELVATVHSLALAQQVPS 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A+G+D R+ LA I D+QLYYQ + R++LPYAPD G EM LLR AF Sbjct: 301 AIGDDEPE-RDRLLALAERIDAEDLQLYYQIGVNARRDLPYAPDPATGFEMALLRMHAFR 359 Query: 361 PRMPLPEPEVPR 372 P P P Sbjct: 360 PAEGAPRVAAPT 371 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 7/133 (5%) Query: 511 AKLAAEAIERDPWAAQVSQLSLPKLVEQVALNA-WKEESDNAVCLHLRSSQRHLNNRGAQ 569 A+ A + W V L + +A + W V L L S +LNN + Sbjct: 420 AEGATDEDAVARWTQIVG--GLSGPLRMIAAHCEWVGREGARVILRLDESHEYLNNAERR 477 Query: 570 QKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRR 629 ++L AL G T+ L I P TP + +E+ A+A +++ D +Q L Sbjct: 478 ERLQTALGEAFGETITLQIDIG--PTRWTPAMAERQQAQERQAEAEQALAGDPALQGLCE 535 Query: 630 FFDAELDEESIRP 642 FD +L +RP Sbjct: 536 AFDGQL--HGVRP 546 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 157/471 (33%), Positives = 238/471 (50%), Gaps = 13/471 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS Q L RK+R QTF ++VGQEHV L N + G+I HAYLF G RG GKTS ARLLAK Sbjct: 1 MS-QSLYRKYRSQTFDELVGQEHVKKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAK 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC + T PC C C I +GR VDLIEIDAASR KVED D+++ V +APA R+ Sbjct: 60 AVNCLSEGT-KPCNSCSACLSINEGRAVDLIEIDAASRRKVEDVADIIERVNFAPAELRY 118 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ H+FNALLKTLEEPP H F+LATT+ K+ TI+SRC +F + + Sbjct: 119 KVYIIDEVHMLTTHAFNALLKTLEEPPAHAIFVLATTEVWKVLPTIISRCQRFDFRRITP 178 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 +I +L I E+I + AL +A+A+ GSLRDA+S+ DQ GD +++ + V + Sbjct: 179 REIVERLAFIAENENIKIQKDALIAIAKASTGSLRDAISILDQLTVYGDEEITLEHVKQL 238 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + +D + V A+++ + + ++L+ + + G++ E++ L + +++ Sbjct: 239 LGIVGEDVVANFVGAIIDNDTQAALSLLTQLSEHGVDPRQFTQELVSYLRDLMLLKAYNQ 298 Query: 301 ALGNDMAAI--ELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 + + A + + + + + +E+ + AL Sbjct: 299 NASKAGIERVSLQAISDQASMVSIGRLHEITEKFSTLDYTIRTGSYGYLPLELAAV-ALT 357 Query: 359 FHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 P E RQ P + +V + + T+ A + Sbjct: 358 NKDSQPYERTENQRQQPNPAHTNSKSVIHRVEEVAEDVKDAISDIVAKVTSKNDAALPE- 416 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKA 469 + +SEP R + L+RL + + +VQA Sbjct: 417 -------AQTSQSEPITLDRVQANWQRILDRLKASSLKVQALLKAGRPVAV 460 >UniRef50_Q73K31 DNA polymerase III, gamma and tau subunits, putative n=2 Tax=Treponema RepID=Q73K31_TREDE Length = 612 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 178/642 (27%), Positives = 284/642 (44%), Gaps = 65/642 (10%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M YQV A + RPQ F D++GQE V L + G+I HAYLFSG RG GKTS AR+LAK Sbjct: 1 MEYQVTATRRRPQRFEDLLGQEFVAATLQKSIEAGKIAHAYLFSGPRGCGKTSSARILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TPCG C +C EI G +D+IEID AS T V D R + D + + P R+ Sbjct: 61 VLNCAEGPRPTPCGHCTSCEEITAGSCLDVIEIDGASNTSVNDVRQIKDEILFPPNSNRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K+Y+IDEVHMLS +FNALLKT+EEPP +V F+ ATT+ K+P TI SRC QF+ K + + Sbjct: 121 KIYIIDEVHMLSTSAFNALLKTIEEPPPYVVFIFATTEIHKVPATIKSRCQQFNFKLVSI 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E ++ L E I+ + AL +AR A GS+RDA +L DQ A DG ++ + + Sbjct: 181 EILKQALADAAAELGISADDEALYWIAREATGSVRDAYTLFDQVAAFSDGHITFEKIHEK 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D LV A V NG+ +++++ GI E ++ + + +V+ Sbjct: 241 LGLTGVDSINKLVSACVAKNGQEALSILDGILQGGISVEQVVSDCADYFRSLLLVKHGIT 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF- 359 + +++ + I+ +L K+L ++ D+R +E+ + R Sbjct: 301 KEALIGQRADRFPQDILQGWEAVQIERALSIMLQLFKDLRFSIDQRYELELAVSRLSWLG 360 Query: 360 --HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV--PLPETTSQVLAA 415 L +S T V T +P + +S P+++P T Q A Sbjct: 361 DYVSPADLKTAFDAAKSLISSRRTDVETGRPLPHREESRPKESPRPFDNAGSLTEQFKAV 420 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEA 475 ++ ++ T+ K E + P +N + E+ ++ + Sbjct: 421 LRRDNKLDVFTEKKNEEKQPVSNNVPSDNVSFEK-------------KDEAQETVLQTVR 467 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 A V + KE + K + + W Sbjct: 468 SVENAFNNVEELKEPLIEALLEKSGILSSAVGQSK-----------DWIL---------- 506 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPA 595 ++++ L RSS + + + + +++S + G ++L + E P Sbjct: 507 ------------KEDSLTLFARSSFDYTLIQKQKDTVIDSISEITGKKIKLILKEYIPPQ 554 Query: 596 VRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDE 637 +E E++ I+T+ F ++ E Sbjct: 555 PENKVE--------------ETVKEPEKIRTITDVFMGKIVE 582 >UniRef50_A8KYB1 DNA polymerase III, subunits gamma and tau n=2 Tax=Frankineae RepID=A8KYB1_FRASN Length = 855 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 175/611 (28%), Positives = 256/611 (41%), Gaps = 55/611 (9%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MS L ++RP TFA VVGQEHV AL + L GR+HHAYLFSG RG GKTS AR+LA Sbjct: 1 MS-TALYNRYRPATFAQVVGQEHVTEALGHALRSGRLHHAYLFSGPRGCGKTSSARILAA 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE G T PCGVCD C I G +D+ EIDAAS V+D RDL + +APA RF Sbjct: 60 SLNCEKGPTPEPCGVCDQCVSIRTGSSMDVTEIDAASHGLVDDARDLRERAFFAPASARF 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV+++DE HM++ +FNALLK +EEPP ++KF+ ATT+P K+ TI SR + + + Sbjct: 120 KVFVVDEAHMVTAAAFNALLKVVEEPPSYLKFVFATTEPDKVIATIRSRTHHYAFRLVPP 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSA 239 +R LE I +E + EP L L+ RA GS+RD+LS+ DQ +A +GDG +S + A Sbjct: 180 GVLRKHLESICAQEGVVVEPSVLPLVVRAGAGSVRDSLSVLDQLLAGAGDGGLSYERAVA 239 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG D V+A+ E +G + +++ + G + ++L L + +V P Sbjct: 240 LLGMTDGILLDETVDALAERDGAALFTVVDSVVSSGHDPRRFATDLLDRLRDLIVVAAVP 299 Query: 300 AA-----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 A L RMR A I P ++ L G E+ R+ +E+ L Sbjct: 300 DAVERGLLEAFSTDQVDRMRAQAGRIGPVELSRTADVLHAGLVEMRGTASPRLLLELILA 359 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 RAL P A P + + + ++A + Sbjct: 360 RAL---------------------LPGAAGDPAALAVRLERLERRAVVGGGAGAGTTPTG 398 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 + + + PA + A + Sbjct: 399 GAEVGGATHADARFGGARPADGGPG-----------FGGAADSAHGQAAAHAPAPAAHTQ 447 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPK 534 R + L A + + E+ A + + Sbjct: 448 TARPASPARPAMPAAAAPGGGGLDAAALNARWDEVLALAVQRSRRTHAILKDYA------ 501 Query: 535 LVEQVALNAWKEESDNAVCLHLRSS--QRHLNNRGAQQKLAEALSMLKGSTVELTIVEDD 592 + E + V L + + + LA L+ G T +TI Sbjct: 502 --------SVAEVRGDEVVLAFSAPAMAKMFGQGNNVEILATLLAEKFGGTWRVTIGGGP 553 Query: 593 NPAVRTPLEWR 603 + P R Sbjct: 554 GSSGGRPQAPR 564 >UniRef50_B6WWA6 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWA6_9DELT Length = 670 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 184/656 (28%), Positives = 276/656 (42%), Gaps = 38/656 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M + LA K+RPQTFA V GQ+ V L+ + R+ AYL SGTRGVGKT+IAR+ AK Sbjct: 1 MKHLSLAAKYRPQTFAQVAGQDMVKAVLSRAAAEDRVAAAYLLSGTRGVGKTTIARIFAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC PC CD CR+I QG VD+ EID AS VED R L +N+ YAP GR+ Sbjct: 61 ALNCRHAPGPEPCNQCDQCRKITQGSHVDVTEIDGASNNSVEDARALRENIGYAPMEGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV++IDE HMLSR +FNALLKTLEEPP V F+ ATT+ K P+TI+SRC F + L Sbjct: 121 KVFIIDEAHMLSRSAFNALLKTLEEPPARVVFIFATTEAHKFPITIVSRCQHFVFRHLGE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + + L +LN+E++ E A++L+AR A GS+RD++SL DQ +A G +++ + Sbjct: 181 DALVQHLSQVLNKENVPFEEGAVRLIARRAAGSVRDSMSLLDQTLALGGDNLTSAVTREV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + + L +A+ + V L +G++ + E+ G L + +++ Sbjct: 241 LGLAGQELSADLFDALHARDCAAVSQLCAGLFRQGVDIGFFVRELAGHLRDLFLLRQGGD 300 Query: 301 ALGNDMAAIELRM---RELARTIPPTDIQLYYQTLLIGRKELPYA------------PDR 345 A+ + + + LA + +Q +L ++ + Sbjct: 301 AVAPTLGLPGEEILFWQGLAPRFSAGHLHAAWQMVLDAQRGIVQNPEPAAALELLLLNLA 360 Query: 346 RMGVEMTLLRA-LAFHPRMPLPE-PEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV 403 + + L R A P P+ P RQ +P+ P + V A + Sbjct: 361 LLPQLLPLERMDSAPAPAAPVQGHPGHDRQEGSPLPPRDMGHAAPVQAPAARAREHGTPA 420 Query: 404 PLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVP 463 A + + + A+ A A +A E A + +A Sbjct: 421 EKSAAAGSSEPAPEPAPSRRPGSCARPQREAPARQATSRPARVTETPAPKAAQPRAEAPA 480 Query: 464 SALEKAPAKK---EAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE- 519 P++ EA A P++ A A TP + A Sbjct: 481 HPEHVGPSESGMIEADDIPAAAPIIPVAPARPAAPAAPVAPAAPATPPVPPAAPAVETRP 540 Query: 520 ---------RDPWAAQ----VSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLN-- 564 R W A +L + Q+ L S CL L L Sbjct: 541 TAPAAAAGFRPDWQAFCDFCARRLENGEAAPQLHLLRQLRASWEPDCLRLTPRAETLLHQ 600 Query: 565 NRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIA 620 + +L +AL+ L + RT E + QA ++ Sbjct: 601 TEKQRPQLEQALAAW--GAGHLRLEFVAPRQARTEAELIEEFRNRPEMQACLRLLN 654 >UniRef50_A8LYH3 DNA polymerase III, subunits gamma and tau n=8 Tax=Actinomycetales RepID=A8LYH3_SALAI Length = 834 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 169/605 (27%), Positives = 256/605 (42%), Gaps = 20/605 (3%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ L RK+RP+TFA+++GQEHV L+ L GR++HAYLFSG RG GKTS AR+LA+ Sbjct: 1 MA-LALYRKYRPRTFAEIIGQEHVTEPLSQALRSGRLNHAYLFSGPRGCGKTSSARILAR 59 Query: 61 GLNCETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118 LNCE G T PCG C +CR + +D+IEIDAAS V+D R+L + +APA+ Sbjct: 60 SLNCEHGPTPEPCGTCGSCRALATDGAGSIDVIEIDAASHGGVDDARELREKAFFAPAQS 119 Query: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 178 RFK+Y+IDE HM+S FNALLK +EEPPE+VKF+ ATT+P+K+ TI SR + + + Sbjct: 120 RFKIYVIDEAHMVSSAGFNALLKLVEEPPEYVKFIFATTEPEKVLGTIKSRTHHYPFRLI 179 Query: 179 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAV 237 + +R LE + E + EP L+ RA GS RD+LS+ DQ IA +G V+ Sbjct: 180 PPKVLRPYLEQLCQAEGVQVEPAVFPLVVRAGGGSARDSLSVLDQLIAGAGPEGVTYARA 239 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 +A+LG D + +A+ +G A ++ G + ++L L + ++Q Sbjct: 240 AALLGVTDSALIDEMCDALAAGDGAAAYATVDRIVGAGHDPRRFAADLLERLRDLIVLQR 299 Query: 298 SPAA----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 P A L + RM A+ + P + + G E+ A R+ +E+ Sbjct: 300 VPDAAPKGLVDGPDDQIERMTAQAQRLGPGTLSRCADIVHDGLVEMRGATAPRLLLELIC 359 Query: 354 LRALAFHPRMPLPEPEVPRQSFAP---VAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS 410 R L + +A T + P + A P + Sbjct: 360 ARMLLPGADDSAGGLLQRLERLERRLTLAGTDALPAAPAPSAGAAPAPSAGAAPALSAGA 419 Query: 411 QVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAP 470 + + A A +PA + ++ A+ P P Sbjct: 420 ASASDDSPRRPPAAAVPASAEDPAGSLAMSGTSSGLAAARAAAAPAGSRADQPPGQPDRP 479 Query: 471 AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQL 530 + + + TP+ + T + AA R W V + Sbjct: 480 GPDASDASRRASARPAVMPDPVTPEPPRPGTTDRGTLDAAA-------VRRHWPEVVGLV 532 Query: 531 SL--PKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTI 588 K E + L R L E+L G ++ Sbjct: 533 GRKSKKAAAWAREATVHEVDGETLVLAFRYPFHAQALANEPDLLIESLYEELGERWQIRC 592 Query: 589 VEDDN 593 Sbjct: 593 EVAGE 597 >UniRef50_B2RJ68 DNA polymerase III, gamma and tau subunits n=2 Tax=Porphyromonas gingivalis RepID=B2RJ68_PORG3 Length = 602 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 141/481 (29%), Positives = 232/481 (48%), Gaps = 9/481 (1%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y V A K+RP +FA +VGQE + L + + + HAYLF G RGVGKTS AR+ A+ + Sbjct: 5 YIVSALKYRPDSFASMVGQEALSATLKSSIVQQKTAHAYLFCGPRGVGKTSCARIFARAI 64 Query: 63 NCETG-ITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 NC CG C++C+ ++ R +++ E+DAAS V+D R L++ P G++K Sbjct: 65 NCLERLPDGEACGRCESCKAFDEQRSMNIYELDAASNNSVDDIRLLIEQANVPPQIGKYK 124 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 +Y+IDEVHMLS+ +FNA LKTLEEPP +V F+LATT+ K+ TILSRC F K + Sbjct: 125 IYIIDEVHMLSQQAFNAFLKTLEEPPSYVIFILATTEKHKILPTILSRCQIFDFKRIPPA 184 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAML 241 +I L ++ + E I E AL ++A A+G +RDALSL D+ +G ++ L Sbjct: 185 RIEQHLRYVADSEGIKAEAEALAIIATKADGGMRDALSLFDRIARFSEGNITYANTIENL 244 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 LD D L + ++ + V+ +++E A+G + + ++ + + M Q + Sbjct: 245 NILDYDYYFRLTDFFLQGDYRSVLIVLDELLAKGFDGQVIVSGLASFFRDLMMAQDASTL 304 Query: 302 LGNDMAA-IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA-F 359 + + + R ++A P + + + L ++ + +R+ +E++L+ A F Sbjct: 305 PLLEQSEVVIQRYVDMAARCPTSFLYQSLKILNACDQQYRQSNGKRLLLELSLMNIAALF 364 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMT-PTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 + P P Q P +V P QP AP Q+ P P Q Sbjct: 365 SKGLTAPPPTHGAQHANPAVSGSVSPRPAPAKEQPSVAPSQSSVPPQPSIGEQRRQPETT 424 Query: 419 LQ-----RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKK 473 + + + P A + L + + +++Q E + Sbjct: 425 APTITEDKPEQTKVVPPTRPMATSTVGSEGRFTLRGIRNKQEQLQNNIQEVRTEMTESFD 484 Query: 474 E 474 E Sbjct: 485 E 485 >UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR2_METI4 Length = 618 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 144/461 (31%), Positives = 230/461 (49%), Gaps = 4/461 (0%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 YQV +RK+RP+ F++VVGQEHV+ L N + LGR+ HAYLFSG RG GKT++AR+LAK L Sbjct: 16 YQVFSRKYRPRVFSEVVGQEHVVRTLKNAIRLGRVAHAYLFSGPRGTGKTTLARILAKSL 75 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC G A C +I+ GR +D IEID AS V+ R+L + + P + R+K+ Sbjct: 76 NCADGPNADFDPDDPICLDIDAGRSLDCIEIDGASNNGVDQVRELREAAKSLPVQSRYKI 135 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML++ +FNALLK LEEPP HVKF+ ATT+P K+P T+ SRC +FH K + Sbjct: 136 YIIDEVHMLTQAAFNALLKILEEPPAHVKFIFATTEPYKIPPTVSSRCQRFHFKRIPRRL 195 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I L+ I +E I E +AL+++A +EG+LRDA DQ I+ ++ +V M G Sbjct: 196 IADHLQKICIQEKIDAERKALEMIADISEGALRDAEVALDQLISFYGEKIDQSSVQEMFG 255 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + + L+ + + +G + ++ G + +LL LLH IA+ S +L Sbjct: 256 LVGIEPLCRLLTDLAQGDGRGALKEAHQLLESGKDPLSLLRSFRNLLHDIALYMASVESL 315 Query: 303 GNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHP 361 G ++ ++R ++ + + + + + +L YA + + E+ +L Sbjct: 316 GLELDPEELDQVRSMSSRLSLSFVINLLEAIDQWENKLRYALHKEVLFEIAILELSQLKE 375 Query: 362 RMPLPEPEVPRQSFAPVAPT---AVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQ 418 ++ + E + + T PP P+ ++ LP+ + A Sbjct: 376 KVAIEELLAQWRVQGEESSENLKGEKTALSTPPLPEEQGKKEEETTLPQALFPSVQAGNP 435 Query: 419 LQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQA 459 + + P + + Sbjct: 436 PSGTKEQPQGGSLTPVGTQKKEQTAAELFSHSPPPLSPQEQ 476 >UniRef50_C5BXR7 DNA polymerase III, subunits gamma and tau n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BXR7_BEUC1 Length = 841 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 169/685 (24%), Positives = 269/685 (39%), Gaps = 92/685 (13%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L R++RP TFADV+GQEHV L L R HAYLFSG RG GKT+ AR+LA+ LNC Sbjct: 4 ALYRRYRPDTFADVIGQEHVTGPLMAALRSDRATHAYLFSGPRGCGKTTSARILARCLNC 63 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T TPCG CD+C E+ +G +D++EIDAAS V+D RDL + +APAR R+K+ Sbjct: 64 AQGPTDTPCGTCDSCVELARGGPGSLDVVEIDAASHNGVDDARDLRERAVFAPARDRYKI 123 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 +++DE HM++ FNALLK +EEPP HVKF+ ATT+P ++ TI SR + + + + Sbjct: 124 FILDEAHMVTAQGFNALLKLVEEPPPHVKFVFATTEPDRVIGTIRSRTHHYPFRLVPPQV 183 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ-VSTQAVSAML 241 + L + E +A P L L+ RA GS+RD++S+ DQ +A D + A+L Sbjct: 184 LGDYLAQVSEAEGVAVAPGVLPLVVRAGGGSVRDSMSVLDQLMAGADSDGLDYDRAIALL 243 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G +V+A +G V +I+ G + + ++L L + ++ + Sbjct: 244 GFTHATLLDDVVDAFAAGDGATVFRVIDNVIESGHDPRRFVEDLLERLRDLIVLAAAGDQ 303 Query: 302 LGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + RMR A+ + + + G E+ A R+ +E+ R L Sbjct: 304 AVAVLRAIPEDQVERMRGQAQHLGAARLSRAADLVNAGLTEMTGATSPRLQLELLCARIL 363 Query: 358 AFHPRMPLPEPEVPRQSF------------------------APVAPTAVMTPTQVPPQP 393 P P V +S P + T+ PP P Sbjct: 364 --LPATPAAATGVEPRSAGTSGPASGSAPSGGAGSAAGAAPSRRETPAQPVPRTERPPAP 421 Query: 394 --------------------------------QSAPQQAPTVPLPETTSQVLAARQQLQR 421 ++ P+ A +V ++ AAR+ Sbjct: 422 ERGAPSRAAAEPPAASAARGERERGSAARAADEAGPESAGSVASGSAEAEPGAARRGAPA 481 Query: 422 VQGATKAKKS---------------------EPAAATRARPVNNAALERLASVTDRVQAR 460 + ++ E A + P + + E + + Sbjct: 482 TDAPARRQQPDARPGGGDDVEGRGAGAGPEAEEAPGSAEPPRSEVSDEEAPRSGEPAAGQ 541 Query: 461 PVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIE- 519 ++ + E P + + P+ + +A Sbjct: 542 SRSEVSDEEAPRSEVPAEGPPHPQEAAAGRTPSEAPAAGPVSAAPQPDPSPLTGTDAATV 601 Query: 520 RDPWAAQVSQL-SLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLN----NRGAQQKLAE 574 R W + L + ++ + + S +A L L + L N + L Sbjct: 602 RRRWPEVLETLSGIRRVTWTLVAQNAQVASISAGVLELAFATEGLAVTFRNGTHAEALER 661 Query: 575 ALSMLKGSTVELTIVEDDNPAVRTP 599 AL G V + D P Sbjct: 662 ALHETLGLDVRVRATIGDAAPTSPP 686 >UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HBY1_ARTCA Length = 1202 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 154/513 (30%), Positives = 236/513 (46%), Gaps = 7/513 (1%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L R++RP +FADV+GQEHV L L R++HAYLFSG RG GKT+ AR+LA+ LNC Sbjct: 6 ALYRRYRPDSFADVIGQEHVTGPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARCLNC 65 Query: 65 ETGITATPCGVCDNCREIEQGRF--VDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T TPCGVC +C E+ +G +D+IEIDAAS V+D RDL + YAP R R+K+ Sbjct: 66 AEGPTDTPCGVCPSCVELARGGSGSLDVIEIDAASHGGVDDARDLRERATYAPVRDRYKI 125 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM++ FNALLK +EEPPEH+KF+ ATT+P K+ TI SR + + + E Sbjct: 126 FIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIRSRTHHYPFRLVPPEP 185 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 + LE + N+E++ P L L+ RA GS+RD+LS+ DQ +A +G + + A+L Sbjct: 186 LMAYLELLCNQENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAGAGPNGLDYELAVALL 245 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G +VEA+ ++ V ++ G + + ++L + +VQ P + Sbjct: 246 GYTHASLLDDVVEAVAASDAATVFRAVDRVIQTGHDPRRFVEDLLERFRDLIIVQAMPES 305 Query: 302 LGNDM----AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + A R++ A + ++ E+ A R+ +E+ R L Sbjct: 306 AQVILRGMPADQIARLQNQAHNLGAAELSRAADVTNTALTEMTGATSPRLHLELLCARIL 365 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 + Q S A + P + + A Q Sbjct: 366 LPSSEQNERGIAARIDRVERRLNYSGHDAGAPAGQGASGTLGAGSAPHTPAAAAIPVAAQ 425 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 G + A + A+ A A + APA + + Sbjct: 426 AAPAAGGQASEPHAPAAQSPSAQDAAGQAASVQAPAEQAPAGQAQVPQAASAPAPADGPQ 485 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELA 510 + + + A P A + E +P A Sbjct: 486 GQTPRAPLASAQPQAGPDAPSRPATGESSPRTA 518 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 140/488 (28%), Positives = 237/488 (48%), Gaps = 5/488 (1%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L RK+RP +VVGQEHV+ L N ++ +I HAYLF G RG GKTSIA+L A+ Sbjct: 1 MSYQSLYRKYRPAHLDEVVGQEHVVNVLKNSITKNKISHAYLFCGPRGTGKTSIAKLFAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NCE CG CDNC + G DLIEIDAAS V++ R L++ V+Y P G++ Sbjct: 61 AVNCEN-PDQVICGTCDNCLAVADGTHPDLIEIDAASNNGVDEIRGLIEKVKYTPILGKY 119 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHMLS+ +FNALLKTLEEPP HV F+LATT+ K+ TI+SRC ++ + Sbjct: 120 KVYIIDEVHMLSQGAFNALLKTLEEPPSHVVFILATTEIHKVLPTIISRCQRYDFNRIGE 179 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 I +L+++LN E++ E +L+A + G LR+AL++ +QAI D Q++ + Sbjct: 180 VDIAKRLDYVLNNENVEAEQGVSKLIASLSGGGLRNALTILEQAIVLADDQITVNQIYDT 239 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G + D ++L +++ E E ++ I + + + L+++++ L + + + Sbjct: 240 NGIITDQDKINLFDSIREQQMEALVNQIAMMNEKSVNIDRLMMDLVSGLKDSIIYSHTKS 299 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 + + LA T+ + + LL ++ ++ ++ E+ ++ F+ Sbjct: 300 DAL-VNENSLMFIHYLAETLQVHERLKVIEKLLSYTDKMKFSQNQSTYFEVAMVDV--FN 356 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 + A + PQ Q + P + + ++ + Sbjct: 357 SFSNKNVNLNQQTELTMTAEQIYRAENNIKPQKPKTSTQIEVIKKPAPVEESV-PFEEDK 415 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 + + E + + + V + ++ + +E R+K Sbjct: 416 DIDSVEEEIVIETQVLSEVSTEQTESFLTVDDVVRYMVTADKAIRIQDDASYQEIDRYKV 475 Query: 481 TTPVMQQK 488 + Sbjct: 476 DLKWARAS 483 >UniRef50_C7GZE0 DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZE0_9FIRM Length = 473 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 143/423 (33%), Positives = 222/423 (52%), Gaps = 6/423 (1%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L ++RP TF +V+GQE+++ N L G + HAYL G RG GKT++ARL+AK +NC Sbjct: 7 ALYTRFRPNTFDEVIGQENIIKVFLNQLKAGSVSHAYLLCGIRGTGKTTLARLMAKAVNC 66 Query: 65 ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYL 124 PCG C+NCR I + +D+IEIDAAS V+D R+L+D V Y P+ KVY+ Sbjct: 67 LD-PQKKPCGACENCRSITEESHMDVIEIDAASNNGVDDVRELIDTVAYPPSVAEKKVYI 125 Query: 125 IDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIR 184 IDEVHMLS+ +FNALLKTLEEPP HV F+ ATTDP K+P TILSRC++F L+ + + Sbjct: 126 IDEVHMLSQGAFNALLKTLEEPPSHVIFIFATTDPNKIPKTILSRCMRFDLRRITESDLV 185 Query: 185 HQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTL 244 +L + E AL+L+A AEGSLRDALS+ +Q +A +G ++ + V L + Sbjct: 186 KRLGFVCESCSREIEEDALKLIAVNAEGSLRDALSILEQVMAIDEGIITREDVLESLHAV 245 Query: 245 DDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP--AAL 302 D + + +++ ++ + E+ + N A G + + L ++L L + + ++S AL Sbjct: 246 GDGKIIEIMDGVLSNDLEKAIVTCNNAFDDGKDEKQFLNDLLIYLRNMMLAKVSGELDAL 305 Query: 303 GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL-AFHP 361 N + ++ A + I+ ++ A R+ +E L++ P Sbjct: 306 INMHSDDINELKRQASGVSMDFIERAIFEIVRIIDLSKGASYPRILIEAGLIKVSNCLSP 365 Query: 362 RMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQR 421 + + E + T ++P P A AP E +Q + + Sbjct: 366 DKSIKKEETKPSGIKKSSNVGKNTNDEMPVTP--AETSAPVAKSQEGMAQGKSEKDTTTE 423 Query: 422 VQG 424 Sbjct: 424 NNE 426 >UniRef50_C0GUE6 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUE6_9DELT Length = 561 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 140/445 (31%), Positives = 226/445 (50%), Gaps = 10/445 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+ L ++RPQ FA V GQ+ + + L+ R HAYLFSGTRGVGKT++AR+L+K Sbjct: 1 MAKAGLTARYRPQNFAQVAGQDFIKSILSRAAGQDRPSHAYLFSGTRGVGKTTLARILSK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC G PC C +C +I +G D+ EIDAAS T V++ R L ++V Y+P GR+ Sbjct: 61 AINCYNGPAPEPCNQCSSCEQITRGASPDVWEIDAASHTGVDNVRKLREDVAYSPMSGRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KV +IDE HMLS +FNALLKTLEEPP H F++ATT P+K P T++SRC + K L Sbjct: 121 KVVIIDEAHMLSTSAFNALLKTLEEPPAHCVFIMATTAPEKFPATVISRCQHYVFKRLTH 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 ++ L +L+ E +++E A+ LL R GS+RD++S+ Q +A GD + T V + Sbjct: 181 GELFAHLCFVLDTEGVSYEKEAVHLLTRRGSGSVRDSMSMLGQVLALGDEGLKTADVRRV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG D + L L++ +++ + R+ ++N +G++ L EM + ++ Sbjct: 241 LGLADQELFLRLMQHILDQDLVRLHEMVNYLLEQGLDLGFFLQEMAQCWRNMFLLSQGGQ 300 Query: 301 A---LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + A + RE+A + I +Q +L RK + + + + +E+ L Sbjct: 301 EAGKVLDLPAEEVEKWREMAGMFAASTIHAGWQMVLESRKSILGSYEPGISLELMLYNLA 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 +P+ AP T + A + ++ TS + Sbjct: 361 YLPELIPVSGY-------APEPQPRGETRQNTAEKKYPAGGEKKSLNNEYKTSSSPGEPE 413 Query: 418 QLQRVQGATKAKKSEPAAATRARPV 442 + + + + A +P Sbjct: 414 VVTENFQEFQDRGEDKAEVQEEKPP 438 >UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMB1_9ACTN Length = 723 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 155/613 (25%), Positives = 249/613 (40%), Gaps = 53/613 (8%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 + L K+RPQTF VVGQ+HV+ L + G++ HAYLF G RG GKT++ARLLAK L Sbjct: 2 ESLYTKYRPQTFEQVVGQKHVVGTLKRAVLEGKVSHAYLFCGPRGTGKTTMARLLAKALL 61 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD-LLDNVQYAPARGRFKV 122 C P G C+ C+ I G D++EIDAAS T V++ R+ ++ YAP RG+ KV Sbjct: 62 CRKAPGQLPDGTCEECQLIAAGNHPDVVEIDAASNTGVDNVREEIISRANYAPVRGKGKV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHML+ +FNALLKTLEEPP HV F+L TTDPQK+ T+LSR +F A+ E+ Sbjct: 122 YIIDEVHMLTTAAFNALLKTLEEPPAHVTFILCTTDPQKVLGTVLSRVQRFDFHAIGNEE 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 + L+ + E ++ RAL+L+ R A G +RDAL+ +Q GDG VS LG Sbjct: 182 MLSHLQQVCEAESFQYDARALELIVRHARGGMRDALTSLEQLSVFGDGVVSLAIAQDFLG 241 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP--A 300 + A+ + + + +N G + E+ + ++ Sbjct: 242 EASGSLLAHVSTAIAKRDVSTLFEQVNTLVDEGRDVLQFTRELAAHIRNAYVMAAVGPDT 301 Query: 301 ALGNDMAAIELRMRELARTI-PPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAF 359 + ++ + R + L ++ A ++R+ +E+ R Sbjct: 302 SALTITDDERTQLAQEVREYRSADRLARALTILGDASNQMRTASNQRLVLEIAFTRLARP 361 Query: 360 HPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQL 419 + L V T Sbjct: 362 TSDLTLESLAERIADLEYQLADGVSRSTS------------------------------- 390 Query: 420 QRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWK 479 V ++ + ++P T PV + + ++ V +P+P+ + + PA+ Sbjct: 391 -DVDTSSVTEVTKPPVETAPTPVVEVSAQMTSAPVVEVPVQPMPTLVVEMPAQPAPLTPP 449 Query: 480 ATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLV-EQ 538 + P + T A A EA W V Q Sbjct: 450 VSEPTPEVPSQAETSSHDASAR--------TPGNADEATLTRRWKQIVKQYREKAPAHGS 501 Query: 539 VALNAWKEESDNAVCLHLRS-----SQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDN 593 + +N+ D + L L + L +++L + + G T+ ++ Sbjct: 502 LLMNSTLASDDGSNLLVLLPKGSEFASAMLGREEIKKELLTFIEPVLGMR---TVTYGES 558 Query: 594 PAVRTPLEWRQAI 606 + + Sbjct: 559 SLQNKAIADAERA 571 >UniRef50_Q0BVJ3 DNA polymerase III subunit gamma/tau n=8 Tax=Alphaproteobacteria RepID=Q0BVJ3_GRABC Length = 686 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 180/561 (32%), Positives = 276/561 (49%), Gaps = 12/561 (2%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+VLAR++RP+ F D++GQ+ ++ L N +L R+ HA++ +G RGVGKT+ AR++A+ L Sbjct: 48 YRVLARQYRPRHFDDLIGQDALVRTLRNAFALNRVAHAFMLTGVRGVGKTTTARIIARAL 107 Query: 63 NC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 NC + G TA PCGVC NC I R D++E+DAASRT V+D R++++ ++ P + Sbjct: 108 NCTGADGQGGPTADPCGVCPNCTAILADRHPDVVEMDAASRTGVDDVREIIEATRFRPLQ 167 Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKA 177 R KV++IDEVHMLSR++FNALLKTLEEPP HV F+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 168 ARTKVFIIDEVHMLSRNAFNALLKTLEEPPPHVTFIFATTELRKVPVTVLSRCQRFDLRR 227 Query: 178 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG--QVSTQ 235 +D E + IL +E ++ P+AL L+ARAA+GS+RD LSL DQAIA D +S Sbjct: 228 IDAEVLSAHFSRILEQEGVSASPQALALIARAADGSVRDGLSLLDQAIAQNDPGIPISEA 287 Query: 236 AVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 295 V+ MLG D L L+EA++ + +A+ + A ARG + +L ++L L+H + + Sbjct: 288 QVADMLGLADRGMVLDLLEALMAGDTASALAVTDTAHARGADLGMVLQDLLELIHTLTRL 347 Query: 296 QLSPAALGNDMAAIELRMR--ELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL 353 + P A R+R LA + + +Q LL G E+ APDRR EM L Sbjct: 348 KTIPHLRTAPGMAEAERLRGSALADRLAMPVLGRAWQMLLKGIAEVEAAPDRRAAAEMVL 407 Query: 354 LRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVL 413 +R P E V P S+ A + ++ Sbjct: 408 IRLCYVADLPPPAELVRRLTGAPGTQQPGHQGGGGVAPSTPSSSPTASSTGFRAIAGGIM 467 Query: 414 AARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRV--QARPVPSALEKAPA 471 + + S P + + S + + L + Sbjct: 468 SGGSGAATARQPHAMADSVPDVPVPVFHSFREVAQFVESRREAMLHAHLLHNVHLVRFAP 527 Query: 472 KKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLS 531 R ++ P ++ A + R ++++Q S Sbjct: 528 PVIELRLESNVPHTLPAQLAALLGEANGQRWTIALSSAPGEPTLAEQGRAAGESRLAQAS 587 Query: 532 LPKLVEQVALNAWKEESDNAV 552 +V + LNA+ V Sbjct: 588 NHPVVRAI-LNAFPGARLGTV 607 >UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococcales RepID=A9GQB3_SORC5 Length = 829 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 174/477 (36%), Positives = 243/477 (50%), Gaps = 11/477 (2%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY VLARKWRPQ+F D+VGQEHV T LAN ++ R+ HA+LF+G RGVGKT+ AR+LAK Sbjct: 37 MSYVVLARKWRPQSFEDLVGQEHVSTTLANAIARDRVAHAFLFTGVRGVGKTTSARILAK 96 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNC G TATPC C C EI G VD+ EID AS V++ R L +++ Y PAR RF Sbjct: 97 ALNCVHGPTATPCQTCAPCAEITVGADVDVQEIDGASYNGVDEVRKLQESLPYRPARDRF 156 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 K++++DEVHMLS ++NA LKTLEEPP HVKF+ ATT+ K+PVTILSRC ++ K + Sbjct: 157 KIFIVDEVHMLSNAAWNAFLKTLEEPPPHVKFIFATTEVHKVPVTILSRCQRYDFKLIGA 216 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA---SGDGQVSTQAV 237 + I +L +L++E I + AL LAR A GS+RDA+SL DQ IA + +++ + V Sbjct: 217 QAIAARLRWVLDQEKIPADDPALSALAREAAGSMRDAMSLLDQVIAWVGTSGDRITAEGV 276 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 + +LG D L A+V+ + + ++ E A G + + + L L + + ++ Sbjct: 277 AKVLGVADRVVLHRLAGALVDGDPAACVRIVGELAQEGYDLPHVARDFLAHLRDLVVAKV 336 Query: 298 --SPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLR 355 PA L + R LA D+ +Q ++ + R EM L+R Sbjct: 337 CEDPAPLLDLADEEVADTRALAARADADDLTRLHQGFSRAFDDIARSGQPRASFEMALVR 396 Query: 356 ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAA 415 P +P+ E P+ PQ P S AA Sbjct: 397 LARRPPLLPIDELLRRLGDLERRLNGGGGGGGGGGGAPERGPQ------RPGAPSSGAAA 450 Query: 416 RQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAK 472 ++ A AA N A + AR +A APA Sbjct: 451 PRRGAASAEAAPEDAHASGAAAAGAARANDAAAFHGAPAANGVARANGAAATGAPAN 507 Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 36/284 (12%), Positives = 73/284 (25%), Gaps = 9/284 (3%) Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 A + + A A + +P Sbjct: 537 AAANGVARANGAAAVYGAPGGSGVARAHGGMAANGGVVAGGTSAANVVPFVNGAPGVHGA 596 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYR 477 G ++ + + R VP + + A A R Sbjct: 597 ATSFASGGAAPAFAKAPPYASGAVAPAYRADSAPPPSPRGALYSVPQSAPQFVAPGSAPR 656 Query: 478 WKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVS--QLSLPKL 535 A P Q ++ + + ++AE + W A ++ ++ P L Sbjct: 657 SSAP-PSAQGPAPASSAPPSAQNPAPASSAPPPPAMSAEDLA--TWRAVIAAVRVQRPAL 713 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQ---RHLNNRGAQQKLAEALSMLKGSTVELTIV-ED 591 + A E + V L ++ ++ LA L G+ EL Sbjct: 714 ASVLEHAAVLELTPTRVALGYEANSFLSGQATEPASRDLLARVLGAHFGAPAELVFETIT 773 Query: 592 DNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAEL 635 A + + A + ++ A+ ++ + AEL Sbjct: 774 RGSAGPSLAQVETAERKARVEAAKRAVADHPLVTAAIELLGAEL 817 >UniRef50_A1B872 DNA polymerase III, subunits gamma and tau n=32 Tax=Alphaproteobacteria RepID=A1B872_PARDP Length = 592 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 164/422 (38%), Positives = 243/422 (57%), Gaps = 8/422 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +YQVLARK+RP+TFAD+VGQ+ ++ L N + RI A++ +G RG GKT+ AR++AKG Sbjct: 7 NYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFVMTGIRGTGKTTTARIIAKG 66 Query: 62 LNC-----ETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA 116 LNC + G T PCGVC++C I +GR VD++E+DAASRT V D R+++++V Y A Sbjct: 67 LNCTGPDGQGGPTTEPCGVCEHCVAISEGRHVDVMEMDAASRTGVNDIREIIESVHYRAA 126 Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLK 176 R+K+Y+IDEVHMLS +FNALLKTLEEPP HVKF+ ATT+ +K+PVT+LSRC +F L+ Sbjct: 127 SARYKIYIIDEVHMLSTSAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRCQRFDLR 186 Query: 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQA 236 ++ E + L I E AL L+ RAAEGS RDA SL DQAI+ G G+ + Sbjct: 187 RIEPEVMIALLRRIATTEGAQITDDALALITRAAEGSARDATSLLDQAISHGAGETTATQ 246 Query: 237 VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQ 296 V AMLG D + L L + ++ +A + A G + A+L ++ + H +++V+ Sbjct: 247 VRAMLGLADRGRVLDLFDMILRGAAAEALAELQAQYADGADPMAVLRDLAEITHWVSIVK 306 Query: 297 LSPAALGN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 ++P AL + R + +A +P + +Q LL E+ AP+ M EM ++ Sbjct: 307 ITPEALDDPTIGPDERARGQAIAEKVPMRALTRLWQMLLKALDEVGQAPNAMMAAEMAII 366 Query: 355 RALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLA 414 R +P PE + + + A + ++ P+ A A Sbjct: 367 RLTH-VADLPDPETLIRKVQASAAAGEFSRNAAPSAARGEAPPRAAAPRTPVAVRQDGSA 425 Query: 415 AR 416 A Sbjct: 426 AA 427 >UniRef50_C2L1L6 DNA-directed DNA polymerase n=1 Tax=Oribacterium sinus F0268 RepID=C2L1L6_9FIRM Length = 526 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 134/406 (33%), Positives = 212/406 (52%), Gaps = 3/406 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSY L RKWR + F D+VGQ+ + + N +S RI HAYLF GTRG GKTS+A++LA+ Sbjct: 1 MSYTALYRKWRSRDFDDLVGQDAITRSFKNQVSHDRIGHAYLFCGTRGTGKTSMAKILAR 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C NC+ I +++ E+DAAS KV+D R + + V+Y P R+ Sbjct: 61 AVNCLNPKDGNPCNECANCKAILSNTSINVYEMDAASNNKVDDIRLIREQVEYPPVGMRY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ + NA LKTLEEPPE+ F+LATT+P LP+TILSRC ++ + + Sbjct: 121 KVYIIDEVHMLTESAHNAFLKTLEEPPEYAIFILATTEPNALPITILSRCQRYDFRRIPA 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG-DGQVSTQAVSA 239 + I +L HI+ EEHIA E A+ +AR +GS+RDA+SL DQ + ++S + Sbjct: 181 DIIADRLRHIVEEEHIAIEEEAIHYIARMGDGSMRDAVSLLDQCASYDFQREISYEDTLK 240 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 +LG +D ++ ++ E + + M L++E +G E ++L I + + Sbjct: 241 ILGAVDTAAFSQMIASLREKDIAKAMTLVSEVLEQGKELSQYTSDLLNYYRNIMLAKTVE 300 Query: 300 --AALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L + A + ++ ++ +I + L ++ +A +R+ +E TL++ Sbjct: 301 KIDGLMDLSAENKKQLLSDGESLSMEEILRGIRLLTELLQQYRFARQKRVLLESTLVKLA 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTV 403 + P + + P Sbjct: 361 HPEMEGKTDALLQRLRELEEKMEKGSFLPVERTAFSKEENGDVPEA 406 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 218/384 (56%), Gaps = 7/384 (1%) Query: 2 SYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG 61 +Y+V+ARK+RPQTF +V+GQEH+ ++ ++ +I HAYLFSG GVGKTS+AR++AK Sbjct: 4 NYKVIARKYRPQTFEEVIGQEHITKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIAKA 63 Query: 62 LNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFK 121 LNC G T PCGVC +C +IE G +D+IEID AS +E+ R +++NV+ +P G++K Sbjct: 64 LNCVNGPTDKPCGVCPSCTQIENGTPLDVIEIDGASNRGIENIRTIIENVRISPVAGKYK 123 Query: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVE 181 VY+IDEVH ++ +FNALLKTLEEPP HV F+LATT+ +++ TI SRC Q+ K+L +E Sbjct: 124 VYIIDEVHQITNEAFNALLKTLEEPPAHVVFILATTEAERVLPTIRSRCQQYTFKSLGIE 183 Query: 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ--VSTQAVSA 239 + L+ IL++E+I ++ A+ L+A+ A GS+RD+ ++ ++ IA + +++ V+A Sbjct: 184 DLEKILKGILDKENIKYDEEAIFLIAKQARGSVRDSETILEKMIAYTTDKKYITSADVNA 243 Query: 240 MLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSP 299 ++G + + M+E + + + + ++ + ++ + + M++ Sbjct: 244 VVGGNNFSFVKGFFDIMIEGDKRKYFEFVKKLFEEAVDPRTFINSIIEYIRVVLMIKSGI 303 Query: 300 AA--LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L ++ A +I+ +L + + A + R EM R L Sbjct: 304 DDIKLLEITENERDDLKTFANHYNDDEIERILDYILSVEERIRSASNTRTIFEM---RML 360 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPT 381 L P S + Sbjct: 361 LLLNTDNLIRPVDIISSNMQSVSS 384 >UniRef50_A6DLE8 DNA polymerase III, gamma and tau subunits n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE8_9BACT Length = 890 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 182/653 (27%), Positives = 291/653 (44%), Gaps = 37/653 (5%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQVLARKWRPQTF D+ GQ+H+ + L N + R+ HAY+F GTRG+GKT+ AR+ AK Sbjct: 1 MTYQVLARKWRPQTFDDLAGQDHITSTLTNAIRNQRVGHAYIFVGTRGIGKTTSARIFAK 60 Query: 61 GLNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 119 LNCET PCG C NC EI QG +D+IEID AS V+D R + + QY PAR Sbjct: 61 ALNCETPRADLNPCGQCTNCTEITQGSSIDVIEIDGASNNSVDDIRQIREGAQYTPARCP 120 Query: 120 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 179 +K+++IDEVHMLS ++NALLKTLEEPP H+KFL ATT+ ++ TILSRC + LK + Sbjct: 121 YKIFIIDEVHMLSNAAWNALLKTLEEPPPHIKFLFATTEVHRVLPTILSRCQRLELKPIP 180 Query: 180 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQ--VSTQAV 237 I +L+HI E++A E A+ ++R A G +RD LS+ DQ I+ G +S Q V Sbjct: 181 RNVIAGRLKHICETENVAIEDSAINAISRTANGGMRDGLSILDQMISFCSGNEIISEQDV 240 Query: 238 SAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQL 297 + G ++ + A+++ ++ I+ A E L E+ L + ++ Sbjct: 241 IDVFGMSSSNELKLIASAILQNQAPALIEAIDTLAKAARNMEQLYSELFQLFRDVMILLE 300 Query: 298 SPA---ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLL 354 SP ++ + ++ ELA+ +Q L ++ + ++R +E+TLL Sbjct: 301 SPQQARSILDLEEVEIQQLYELAQLANNKLLQKLLNGFLDYDGKIRHTLNKRTYLEVTLL 360 Query: 355 R------------ALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPP---QPQSAPQQ 399 R L + + P + +P + + Sbjct: 361 RIMKDAHSLRVEDLLKHIQTLRKQGNLQDLEGDLPPLSITQKKNESLEARSLRPATNAEA 420 Query: 400 APTVPLPETTSQVLAARQQLQRVQGATKAKKSE------PAAATRARPVNNAALERLASV 453 V P ++V A + Q + S+ A E ++ Sbjct: 421 LSIVKKPIIDTKVEAEVDTVNDTQNIGDSSASDTQNDYYEEDTAEETTPTVEATETEETI 480 Query: 454 TDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKL 513 + V+ + P + ++ A + +A PV + +T + K H + L L Sbjct: 481 SAIVEDKESPEDALQTEVEEVALQVEAAEPVDNFQASPSTDQTPAKQERHSNSIALEQML 540 Query: 514 AAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLA 573 A E + + + + K ++ + + L S G + K Sbjct: 541 AIPTSENEDTLTKAETIFVQKDDPEL----------SKILLQPDSEDERNIETGVETKPD 590 Query: 574 EALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQT 626 S ++ V T V + + + + + QA E N+Q Sbjct: 591 AEDSEVQAEPVVETEVLPEQANEQANEQANEQANVQANVQANEQANEQANVQA 643 >UniRef50_Q4JSL3 DNA polymerase III, gamma and tau subunits n=10 Tax=Corynebacterineae RepID=Q4JSL3_CORJK Length = 967 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 166/529 (31%), Positives = 249/529 (47%), Gaps = 14/529 (2%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP TFA+VVGQ HV L+ L GRI+HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYRKYRPATFAEVVGQSHVTEPLSVALDSGRINHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T+TPCG C++C + G +D+ E+DAA+ V+D R+L + YAPA R++V Sbjct: 62 VEGPTSTPCGKCESCVSLAPGGPGNLDVTELDAATHNGVDDMRELRERAFYAPAESRYRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM+S FNALLK +EEPPEH+ F+ ATT+P+KL TI SR + + L Sbjct: 122 FIIDEAHMISTAGFNALLKIVEEPPEHLIFIFATTEPEKLLQTIRSRTHNYPFRLLAPPD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 +R LE +++ E + E L+ RA GS RD+LS+ DQ +A +G V+ A+L Sbjct: 182 MRGLLESVVSGEGVPVEDAVYPLVIRAGGGSPRDSLSIMDQLLAGAGPEGVTYNRALALL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D V+A+ E + + A+++E G + ++L + +VQ P A Sbjct: 242 GVTDSTLIDRAVDALAEHDSAALFAVVDEVIDAGYDPRRFSEDLLDRFRDLLVVQAVPDA 301 Query: 302 ----LGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 L N +RE A + + + G ++ A R+ +E+ R Sbjct: 302 FERGLVNAPEESRDVLREQAEKMGQATLTRCASLVNEGLAQMRGATAPRLLLEILCARMA 361 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQV---LA 414 M + ++ AV T S+ Sbjct: 362 LPAAGMTVEALAQRVEALEKGNGGAVGTGAGRAGSGAGGSGAGTRAGTGVRGSRAEMFAR 421 Query: 415 ARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKE 474 R+ Q + + + EPA A A+ V NA + L + + +P ++E E Sbjct: 422 RRKAAQDAAQQSASAQPEPAQAEPAQRVENAPEQNLTAGQEPAAEQPPARSVE----PPE 477 Query: 475 AYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPW 523 A + Q+ T + ++ E E E A + A A R Sbjct: 478 AVAENSPAKETAQEVSPGTAQGTERGTEPETAQETAEESPAIAEARRAR 526 >UniRef50_A8SL11 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SL11_9FIRM Length = 540 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 204/369 (55%) Query: 4 QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLN 63 Q + R++RP+ F VVGQ H++ L N + G + HAYLFSG RG GKTS A++ A+ +N Sbjct: 5 QAIYREFRPKDFTRVVGQAHIVEILKNQIRTGNLGHAYLFSGIRGTGKTSCAKIFARAVN 64 Query: 64 CETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVY 123 C I PC C+NC+ I + + ++++E+DAAS +++D R+L + V Y P ++KVY Sbjct: 65 CLNPIDGNPCNECENCKMILEDKALEVVEMDAASNRRIDDIRELKEKVIYPPQIVKYKVY 124 Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 183 +IDE HM++ FNALLK LEEPP+H+ F+LATT+ KLP TI+SRC +F K ++ I Sbjct: 125 IIDEAHMITNEGFNALLKILEEPPKHLIFILATTEIDKLPDTIISRCQRFEFKRINNSDI 184 Query: 184 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT 243 + ++LN ++ E + L++ + G++RDALSL DQ +A+G +++ + ++ LG Sbjct: 185 VENINYVLNNLNVEIEEDGINLISELSSGAMRDALSLLDQVVATGKEKITIEDINECLGL 244 Query: 244 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG 303 ++ + L ++++ ++ + G ++++++ I +V+ L Sbjct: 245 VNLNMLFELSQSILNSSKNETIETFRNLVKNGKTPHNIIIDLIKHFRNIILVKSIKKELT 304 Query: 304 NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM 363 R E + ++ + LL ++ + + E+ +++ +F + Sbjct: 305 TLNDVEYKRYLEHSNKFEMDELIFILENLLDVEDKMKKSDMQNALAELLIIKICSFKRKK 364 Query: 364 PLPEPEVPR 372 E + Sbjct: 365 SEMEKRIET 373 >UniRef50_B0MPA0 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA0_9FIRM Length = 743 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 16/510 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 + L RK+R TF +V+ QEH+ T L N + G HAYLF+G+RG GKT+ A+L+AK + Sbjct: 2 HLALYRKYRSATFDEVISQEHITTTLKNQIKAGTPAHAYLFTGSRGTGKTTCAKLMAKAV 61 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC + + PCG C++C+ I G D+IE+DAAS V+D R L D V YAP R+KV Sbjct: 62 NCLSPVDGNPCGECESCKAIAAG-CPDIIEMDAASNNGVDDVRALRDEVMYAPTVCRYKV 120 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKT+EEPP HV F+LATT+ K+P TI SRC QF +DVE+ Sbjct: 121 YIIDEVHMLSSQAFNALLKTIEEPPPHVIFILATTEIHKVPATIASRCQQFRFSRIDVEE 180 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 +L I +E++ A +L++R ++G +RDA+SL DQ I+ + + V G Sbjct: 181 STKRLCEIAKKENVNITEDAARLISRLSDGGMRDAVSLLDQCISVSAD-IDEETVRTTAG 239 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 + +L + + E N + +++E + + LL E+L + ++ + + Sbjct: 240 IAGTEHLFTLAQCIHEQNAPEALKILDELHNQSKDLMLLLDELLSHFRNLCILSATNSDF 299 Query: 303 GNDMAA--IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A + + +I L P R+ EM L+R Sbjct: 300 SLIPAGSGTRNDLARQTKEFTLGEIMRCMDILQDCIARTPKTAKRKTVAEMCLIRLCTPR 359 Query: 361 PRMPLPEPEVPRQSFA-----------PVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETT 409 + + + P + + + SA P + Sbjct: 360 LDSDTSALSLRLEKLENRLDKLCDGEISIQPRTAVQTGESTEKHISAQSAKPVSVAGDRP 419 Query: 410 SQVLAAR-QQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEK 468 ++A +++ + K+ + A T + S D + + Sbjct: 420 QDIIADTLNRIENKITSADDKQKDVTAPTAPVQQSGTERNAADSKPDWLFEGTGGADENA 479 Query: 469 APAKKEAYRWKATTPVMQQKEVVATPKALK 498 + ++A + P P+ Sbjct: 480 STGNEDAPPFDLDEPQASVAPPEPVPQEQA 509 >UniRef50_C4FVD6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVD6_9FIRM Length = 655 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 157/665 (23%), Positives = 282/665 (42%), Gaps = 43/665 (6%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 MSYQ L R WRPQ+F ++VGQ + L N + ++ HAYLF+G RG GKTS A++LAK Sbjct: 1 MSYQALYRVWRPQSFDELVGQPLIAETLKNAVKNQQLSHAYLFTGPRGTGKTSAAKILAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 +NC PC C+ C+ I G+ D+IEIDAAS VE+ RDL D V+YAP++ + Sbjct: 61 AVNCPHQTDGNPCNQCELCQAITAGQLSDVIEIDAASNNGVEEIRDLRDKVRYAPSQATY 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVY+IDEVHML+ +FNALLKTLEEPP V F+LATT+P K+P TI+SR +F + Sbjct: 121 KVYIIDEVHMLTTGAFNALLKTLEEPPAQVLFILATTEPHKIPATIISRTQRFDFGRISQ 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 + ++++IL ++ I E AL ++ARAA G +RD+LSL DQA++ V+ Q+ + Sbjct: 181 ADLVGRMQYILEQDGIDFEAEALAVIARAANGGMRDSLSLLDQALSYNRSAVTVQSALEV 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 G+L + + A+ +G + ++++ + G + + E++ + + S Sbjct: 241 TGSLSQLVYIDYLTALQAQDGPKALSILQASLQEGKQANRFVEELILFCRDLLLTLNSKD 300 Query: 301 ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 A +R+ + L ++ +A + VE+ + Sbjct: 301 NFTLLTEAELKPLRQAGDNC---FYYNLIERLNQALNQMRFATQADLFVEVATIELAQEV 357 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ + + A + +V AP +P + + ++ Sbjct: 358 ANEPV-ASGLESGTVADLVRQVQALEAKVRQLEAQLRAGAPAQAVPSPQAPAEDDQPRVP 416 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASV----TDRVQARPVPSALEKAPAKKEAY 476 R + A + + +N A + ++ + +++ P + A+ +A Sbjct: 417 RERPAGQRQAYHLDTDAIYAVLNEATRQDVSQLKSGWAAWLESLPPQDRVRLTGAEVQAA 476 Query: 477 RWKATTPVMQQKE---VVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLP 533 + + ++ V + L + +A + + W+ + Sbjct: 477 GPERILLAFKSQDFCGRVQQDADFVQELSRQLARHFDRPVALAFVLQSEWSQVRQTYKV- 535 Query: 534 KLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEAL--SMLKGSTVELTIVED 591 +++ + + + L + + S S ++ + Sbjct: 536 ----------LYDQAGGPIKIGAVAEPIRLALEAEPLEAEQTSPPSDDFQSLEQVMMDLP 585 Query: 592 DNPAV------------RTPLEWRQAIYEEKL-------AQARESIIADNNIQTLRRFFD 632 + P TP + +E L AQA + + F Sbjct: 586 EAPEASEPGTDLFGLPMETPEPAQPVADQEDLPTVDPVFAQAPDQDSLPPVVSQALALFG 645 Query: 633 AELDE 637 ++ + Sbjct: 646 QDVVD 650 >UniRef50_B1VIS6 DNA polymerase III, gamma and tau subunits n=10 Tax=Corynebacterineae RepID=B1VIS6_CORU7 Length = 1102 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 160/573 (27%), Positives = 253/573 (44%), Gaps = 14/573 (2%) Query: 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC 64 L RK+RP +FA+VVGQEHV L+ L GRI+HAYLFSG RG GKTS AR+LA+ LNC Sbjct: 2 ALYRKYRPASFAEVVGQEHVTEPLSVALDSGRINHAYLFSGPRGCGKTSSARILARSLNC 61 Query: 65 ETGITATPCGVCDNCREIEQGR--FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 G T+TPCG CD+C + G +D+ E+DAAS V+D R+L D YAPA R++V Sbjct: 62 VEGPTSTPCGKCDSCIALAPGGPGSLDVTELDAASHRGVDDMRELRDRAFYAPADSRYRV 121 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 ++IDE HM++ FN LLK +EEPPEH+ F+ ATT+P+KL TI SR + + L Sbjct: 122 FIIDEAHMITTEGFNTLLKIVEEPPEHLIFIFATTEPEKLLATIRSRTHNYPFRLLTPPD 181 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 241 +R L I+ +E E L+ RA GS RD+LS+ DQ +A +G V+ Q A+L Sbjct: 182 MRGLLGRIVADEGAVVEDAVYPLVVRAGGGSPRDSLSIMDQLLAGAGPEGVTYQRAVALL 241 Query: 242 GTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAA 301 G D EA+ + + A++++ G + +++L + +VQ P A Sbjct: 242 GVTDSSLLDRSAEALAAQDQAGLFAVVDDVINAGYDPRRFAMDLLDRFRDLLVVQAVPDA 301 Query: 302 LGNDMAA----IELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 357 + + +R+ A + P + + G ++ A R+ +E+ R Sbjct: 302 FERGLVDVPAQEQDALRQQAEALGPATLTRCAAVVNDGLSQMRGATSPRLLLEILCARMA 361 Query: 358 AFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQ 417 M + ++ P S A P + + R Sbjct: 362 LPAAGMTVEALAQRVEALEQGTGVRAAGPMGASGGLASPAVGAGASPTGDASGLSSGKRY 421 Query: 418 QLQRVQGATKAKKSEPAAATRARPVNNAALERLASVT--DRVQARPVPSALEKAPAKKEA 475 + R + A+ S + A + + E + Q P + P + Sbjct: 422 ERPRRRKASAEAASAESGAAEPQNAVSQGAEPKGAQPQGAAPQQPEQPGNADAQPGQS-- 479 Query: 476 YRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKL 535 +A P + + + + + AA EA + A + Sbjct: 480 --AQAGAPAQSGQPGQQAADQSGEQADGQSAAQGAAPATQEATSQPEKPAVQETAEVA-R 536 Query: 536 VEQVALNAWKEESDNAVCLHLRSSQRHLNNRGA 568 +Q A NA +++ + ++ + Sbjct: 537 AQQPADNAQEQQGAEPAAQDVNAAAQSARQESN 569 >UniRef50_C7H4D6 DNA polymerase III, gamma/tau subunit n=3 Tax=Ruminococcaceae RepID=C7H4D6_9FIRM Length = 625 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 166/590 (28%), Positives = 266/590 (45%), Gaps = 18/590 (3%) Query: 3 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 62 Y+ L RKWRPQ F DVV Q ++TAL N ++ GR+ HAYLF+G RG GKT+ A++ AK + Sbjct: 9 YRALYRKWRPQRFEDVVAQRGIVTALRNQIATGRVGHAYLFTGVRGTGKTTCAKIFAKAV 68 Query: 63 NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKV 122 NC PCG C+ CR I+ G +D++E+DAAS V+D RDL D Y P+ +KV Sbjct: 69 NCLHPQNGDPCGECEICRGIDNGSILDVVEMDAASNNGVDDIRDLRDETAYTPSACHYKV 128 Query: 123 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 182 Y+IDEVHMLS +FNALLKTLEEPP HV F+LATT+ QK+P TILSRC ++ + E Sbjct: 129 YIIDEVHMLSTAAFNALLKTLEEPPAHVIFILATTEIQKVPATILSRCQRYDFTRIGPED 188 Query: 183 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 242 I ++E+I +E + +L++R A+G++RDALS+ D ++ V M G Sbjct: 189 IAQRVEYIAGQEGLELSGEGAELISRLADGAMRDALSILDTCAGVTA-KIDADVVRRMAG 247 Query: 243 TLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAAL 302 D + +A+ + +A + + + ++ + L E++ + + L Sbjct: 248 VTDRSYLFRISDALEAQDAAAALAQLAQLRQQSVDVKRLTEELIAHYRALMLAALPGGQA 307 Query: 303 GN--DMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360 E E + + + L + + D+R+ +E+ L Sbjct: 308 LLSGVSPEEEKLYLEKGPRMGQREAIRAIRALGNALEHMTRGSDQRIELELALFSL---- 363 Query: 361 PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ 420 P+ PVA AV P Q P+P ++ P V P ++ V + Sbjct: 364 ----SEPPQQVAVQAVPVARPAV--PAQEAPRPFASAPVKPFVCAPAASAPVQEPSVEPA 417 Query: 421 RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA 480 +Q + +P +A +A E + P ++ R Sbjct: 418 PMQQSEPEPAPQPVEPPKAEAAASAEEELPPLPEEPPVTSEAPPPWDEPALAAPPQREAP 477 Query: 481 TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDP-WAAQVSQLS-LPKLVEQ 538 P + P+ K + K+AAE I P WA + L ++ Sbjct: 478 PAPAQEVPAAQPQPE-PKPEYTADPALNKPRKVAAEGINPFPQWAEVIKLLQEQDPMLYT 536 Query: 539 VALNAWKEESDNAVCLHLRSSQRHL--NNRGAQQKLAEALSMLKGSTVEL 586 + V + + R N+ +Q+ + + ++ + G V + Sbjct: 537 YLKKSKGYFDGTRVLIDGGKTFRDFIRANKESQKLIKKLIAQVSGVAVPI 586 >UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacteria RepID=DPO3X_BUCAP Length = 363 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 182/359 (50%), Positives = 258/359 (71%), Gaps = 1/359 (0%) Query: 1 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60 M+YQ+LARKWRPQ+F ++GQ++++ A++NG SLG+IHHA+L SGTRGVGKT+IARL+AK Sbjct: 1 MNYQILARKWRPQSFKKIIGQKYIVKAISNGFSLGKIHHAWLLSGTRGVGKTTIARLIAK 60 Query: 61 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120 LNCE GIT+ PC C C+EIE+G +D IEIDAASRTKVE+ R++LDN+ Y P++ RF Sbjct: 61 SLNCEIGITSLPCRKCTICQEIEKGICLDFIEIDAASRTKVEEIREILDNIYYTPSKSRF 120 Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180 KVYLIDEVHMLSRHSFNALLKTLEEPP+H+KF+LATTD +K+P TI SRCL F L L Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPQHIKFILATTDVEKIPKTIRSRCLHFKLNILSE 180 Query: 181 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM 240 E I + L+HIL + + AL++++ A GS+RDAL+L + A+ ++ + + M Sbjct: 181 EDIFNFLKHILKKGGNNFDEEALKIISDYANGSMRDALNLLEHAMHLSKNNINLKNTTEM 240 Query: 241 LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA 300 LG + A L + ++E + +++M L+N+ + G+EW+ +L+EM+ LH IAM++ P Sbjct: 241 LGIPNKKHAFLLTKFLLEQDSKKMMCLLNKISKIGLEWQNILIEMMRFLHHIAMLKSYPK 300 Query: 301 ALGNDM-AAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA 358 E ++++A +IQL Y+ LL GRKEL ++P+ +MGVEM LL+A+ Sbjct: 301 IWNQIFIKNNENEIKKIAENNSKYNIQLCYKILLKGRKELFFSPNHKMGVEMILLQAIT 359 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.139 0.395 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,643,355,693 Number of Sequences: 3077464 Number of extensions: 182197916 Number of successful extensions: 1327093 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 9685 Number of HSP's successfully gapped in prelim test: 12774 Number of HSP's that attempted gapping in prelim test: 1112802 Number of HSP's gapped (non-prelim): 127640 length of query: 643 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 508 effective length of database: 624,938,716 effective search space: 317468867728 effective search space used: 317468867728 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 96 (41.5 bits)