24 d1in4a2 Probab=99.98   E-value=8.1e-30  Score=212.96  Aligned_columns=205  Identities=24%

Q ss_pred             CCCCHHHHCCCHHHHHHHHHHHH----CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             68878784193899999999998----38987268631798888899999999996588888878777748898885378
Q batch____        11 RPQTFADVVGQEHVLTALANGLS----LGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGR   86 (643)
Q Consensus        11 rp~~~~~~~g~~~~~~~l~~~~~----~~~~~~~~l~~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~   86 (643)
                      ||++|+|+|||++++..|++++.    .++.+|.+|||||||||||++|+++|+.+++.                     
T Consensus         4 RP~~~~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~l~~~---------------------   62 (223)
T d1in4a2           4 RPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN---------------------   62 (223)
T ss_dssp             SCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCC---------------------
T ss_pred             CCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC---------------------
T ss_conf             89988780360999999999999987368757738997589978647999999984898---------------------


Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC---EEEEEECCCHHHCC
Q ss_conf             871899655344899999999999853311089669998484648889999999997516786---59999739867801
Q batch____        87 FVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEH---VKFLLATTDPQKLP  163 (643)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~iide~~~l~~~~~~~llk~le~~~~~---~~~i~~~~~~~~~~  163 (643)
                         ++.++.....+.........      ....+.++++|+++.++...++.+++.|++...+   +.+|+.++..+...
T Consensus        63 ---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~  133 (223)
T d1in4a2          63 ---IHVTSGPVLVKQGDMAAILT------SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQPFTLVGATTRSGLLS  133 (223)
T ss_dssp             ---EEEEETTTCCSHHHHHHHHH------HCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCCCCCEEEEEESCGGGSC
T ss_pred             ---EEEEEECCEEEECCCHHHHH------HHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
T ss_conf             ---79984100011000012355------530355011000002488899999999840100227806999606853234


Q ss_pred             HHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH----HHCCCCCCHHHHH
Q ss_conf             3588667-6315888998899999999999708986989999999972987135897999998----5124760089998
Q batch____       164 VTILSRC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAI----ASGDGQVSTQAVS  238 (643)
Q Consensus       164 ~~i~src-~~~~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~~~~~~~~~g~~r~~~~~~~~~~----~~~~~~~~~~~~~  238 (643)
                      .+.++|| ..+.|.+++.+++..+|++++..+++.++++++..|++.++||+|+++++|+.+.    ..+.+.|+.+.|.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~l~~i~~~~~g~~R~~~~~l~~~~~~a~~~~~~~it~~~v~  213 (223)
T d1in4a2         134 SPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVL  213 (223)
T ss_dssp             HHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHH
T ss_pred             CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             02332100002246999899999999999862899876899999997199989999999999999997088987989999


Q ss_pred             HHCCCCC
Q ss_conf             6405679
Q batch____       239 AMLGTLD  245 (643)
Q Consensus       239 ~~~g~~~  245 (643)
                      +.++..+
T Consensus       214 ~~l~~~~  220 (223)
T d1in4a2         214 KTMEVLN  220 (223)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHCC
T ss_conf             9997518