380 c3nhaA_ Probab=96.36   E-value=0.019  Score=34.53  Aligned_columns=122  Identities=19%

Q ss_pred             EEECCCCCCCHHHHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHCCCCCCEEEE----------CCCCCCCHHHHHH
Q ss_conf             863179888889999999999658888----88787777488988853788718996----------5534489999999
Q batch____        41 YLFSGTRGVGKTSIARLLAKGLNCETG----ITATPCGVCDNCREIEQGRFVDLIEI----------DAASRTKVEDTRD  106 (643)
Q Consensus        41 ~l~~Gp~G~GKtt~a~~~a~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~r~  106 (643)
                      +.+.|+.|+||||++++++..+.-..+    ....-...+.....-.-+.-+.-..+          -+..+.+.+.++.
T Consensus        69 ~~i~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~i~q~~~~~~~tv~eni~~~~~~~~~~~~~~  148 (278)
T c3nhaA_          69 LALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEA  148 (278)
T ss_dssp             EEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSEEHHHHHHTTSTTCCHHHHHH
T ss_pred             EEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH
T ss_conf             99985766675326899985065111222221012443210123442115642034430018887541121110235899


Q ss_pred             HHHHHHHCHH---------------------------------CCCCEEEEEECC-CCCCHHHHHHHHHHHHCCCCCEEE
Q ss_conf             9999853311---------------------------------089669998484-648889999999997516786599
Q batch____       107 LLDNVQYAPA---------------------------------RGRFKVYLIDEV-HMLSRHSFNALLKTLEEPPEHVKF  152 (643)
Q Consensus       107 ~~~~~~~~~~---------------------------------~~~~~v~iide~-~~l~~~~~~~llk~le~~~~~~~~  152 (643)
                      ..+.......                                 ..+.+++|+||. -.|...+...+.+.+.+--....+
T Consensus       149 ~~~~~~~~~~~~~l~~~~~~~~~~~g~~lS~G~~qrl~laral~~~~~ililDEpts~lD~~~~~~i~~~i~~~~~~~tv  228 (278)
T c3nhaA_         149 AAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTT  228 (278)
T ss_dssp             HHHHHTCHHHHHTSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCSEEEEECCSSCCCHHHHHHHHHHHHHHHTTSEE
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             99974134455417555543202466643321000001221012211003320732357889999999998543289879


Q ss_pred             EEECCCHHHC
Q ss_conf             9973986780
Q batch____       153 LLATTDPQKL  162 (643)
Q Consensus       153 i~~~~~~~~~  162 (643)
                      |++|++++-+
T Consensus       229 i~itH~~~~i  238 (278)
T c3nhaA_         229 IVVAHRLSTV  238 (278)
T ss_dssp             EEECCSHHHH
T ss_pred             EEEECCHHHH
T ss_conf             9980998999