228 c3hr8A_ Probab=97.39   E-value=0.006  Score=37.81  Aligned_columns=109  Identities=16%

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCH
Q ss_conf             2686317988888999999999965888888---7877774889888537887189965534489999999999985331
Q batch____        39 HAYLFSGTRGVGKTSIARLLAKGLNCETGIT---ATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAP  115 (643)
Q Consensus        39 ~~~l~~Gp~G~GKtt~a~~~a~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~  115 (643)
                      +.++++|++|+||||+|..++...--.....   .....-......-..-...+++.+...+      ..+.++.+...-
T Consensus        59 ~iteI~G~~gsGKTtl~l~~~~~~~~~g~~~~yid~E~~~~~~~~~~lg~d~~~il~~~~~~------~e~~l~~~~~~i  132 (342)
T c3hr8A_          59 RIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDH------GEQALEIVDELV  132 (342)
T ss_dssp             EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHHTCCGGGCEEECCSS------HHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCC------HHHHHHHHHHHH
T ss_conf             07999638887789999999999984698599996888779888986059934678970599------899999999984


Q ss_pred             HCCCCEEEEEECCCCCCH---------------------HHHHHHHHHHHCCCCCEEEE
Q ss_conf             108966999848464888---------------------99999999975167865999
Q batch____       116 ARGRFKVYLIDEVHMLSR---------------------HSFNALLKTLEEPPEHVKFL  153 (643)
Q Consensus       116 ~~~~~~v~iide~~~l~~---------------------~~~~~llk~le~~~~~~~~i  153 (643)
                      ..+..+++|||-+..|.+                     ...+.|...+.+.-.-++||
T Consensus       133 ~~~~~~liviDSi~al~~~~~~~~~~~~~~~~~~ar~l~~~l~~L~~~a~~~~~~vi~i  191 (342)
T c3hr8A_         133 RSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVNKSKAVVIFT  191 (342)
T ss_dssp             HTSCCSEEEEECTTTCCCHHHHTTCCCSSCSSHHHHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred             HCCCCCEEEEECHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             10598389981200027310003443201468999999999999999988739739998