312 c3h1tA_ Probab=96.92   E-value=0.01  Score=36.40  Aligned_columns=114  Identities=16%

Q ss_pred             CHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH----------------HHHHHC
Q ss_conf             3899999999998389872686317988888999999999965888888787777488----------------988853
Q batch____        21 QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDN----------------CREIEQ   84 (643)
Q Consensus        21 ~~~~~~~l~~~~~~~~~~~~~l~~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~----------------~~~~~~   84 (643)
                      |..+++.+...+..++  +-.|++.|.|+|||-++-.++..|................                ...+..
T Consensus       159 Q~~Ai~~i~~~~~~~~--k~~li~~~TGSGKT~~~~~l~~~L~~~~~~~~~~~~~~ril~l~d~~~l~~Q~~~~~~~~~~  236 (515)
T c3h1tA_         159 QQIAINRAVQSVLQGK--KRSLITXATGTGKTVVAFQISWKLWSARWNRTGDYRKPRILFLADTFTPFGDARHKIEGVVK  236 (515)
T ss_dssp             HHHHHHHHHHHHHTTC--SEEEEEECTTSCHHHHHHHHHHHHHHTTCCSSCSSSCCCEEEEECCCTTTCSSEEECCCCCS
T ss_pred             HHHHHHHHHHHHHHCC--CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             9999999999986218--95999858787089999999999986068774035067089984479999999999984158


Q ss_pred             CCCCCEEEECCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             7887189965534489999999999985331108966999848464888999999999751678659999739
Q batch____        85 GRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT  157 (643)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~iide~~~l~~~~~~~llk~le~~~~~~~~i~~~~  157 (643)
                      +..+-+.-+....+            .......+.+.++||||+|.         ...++..+....+.++.|
T Consensus       237 ~~~i~v~Tiq~l~~------------~~~~~~~~~~dlvIvDEaH~---------~~~~~~~~~~~~ig~tat  288 (515)
T c3h1tA_         237 SREIYFAIYQSIPG------------LYKEFPQDFFDLIIIDECHW---------REILEYFEPAFQIGXTAT  288 (515)
T ss_dssp             SCSEEEEEGGGCCC------------GGGGSCTTSCSEEEESCCCC---------HHHHHHSTTSEEEEEESS
T ss_pred             CCCEEEECHHHHHH------------HHHHCCCCCEEEEECCHHHH---------HHHHHHCHHHHHHHHHHH
T ss_conf             88599998788987------------66405800055761221558---------989850002888764443