116 c3b9qA_ Probab=98.45   E-value=3.9e-06  Score=58.57  Aligned_columns=139  Identities=17%

Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC------CHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH
Q ss_conf             389872686317988888999999999965888888787777------48898885378871899655344899999999
Q batch____        34 LGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGV------CDNCREIEQGRFVDLIEIDAASRTKVEDTRDL  107 (643)
Q Consensus        34 ~~~~~~~~l~~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  107 (643)
                      ..+-+|.++|.||+|+||||++--||..+.-......--|.+      ......+..-....+......     +....+
T Consensus        94 ~~~~~~vi~~vG~~G~GKTTt~aklA~~~~~~g~~v~li~~Dt~R~gA~eQL~~~a~~~gv~~~~~~~~-----~~~~~~  168 (298)
T c3b9qA_          94 GFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEKA-----KAATVL  168 (298)
T ss_dssp             CSSSCEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCCCC-----CHHHHH
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCC-----CHHHHH
T ss_conf             168976999972888765569999999999679917998568767468999999988739808972898-----879999


Q ss_pred             HHHHHHCHHCCCCEEEEEECCCCC--CHHHHHHHHHHHH-------CCCCCEEEEEECCCHHHCCHHHHHHHHHCCCCCC
Q ss_conf             999853311089669998484648--8899999999975-------1678659999739867801358866763158889
Q batch____       108 LDNVQYAPARGRFKVYLIDEVHML--SRHSFNALLKTLE-------EPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL  178 (643)
Q Consensus       108 ~~~~~~~~~~~~~~v~iide~~~l--~~~~~~~llk~le-------~~~~~~~~i~~~~~~~~~~~~i~src~~~~~~~~  178 (643)
                      .+.+.+.... +|-++|||.+.+.  .......|.+.+.       ..|..+++++..+--..-+..+..++..+.+..+
T Consensus       169 ~~~~~~~~~~-~~D~IlIDTaGr~~~~~~~~~el~~~~~~~~~~~~~~p~~~~LVl~at~~~~~~~~~~~~~~~~~~~~~  247 (298)
T c3b9qA_         169 SKAVKRGKEE-GYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGL  247 (298)
T ss_dssp             HHHHHHHHHT-TCSEEEECCCCCSSCCHHHHHHHHHHHHHHHTTSTTCCSEEEEEEEGGGGGGGHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEE
T ss_conf             9999999967-997999818888877579999999999986303456885289994067757999999998622899769