119 c1vmaA_ Probab=98.42   E-value=5e-06  Score=57.89  Aligned_columns=125  Identities=22%

Q ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf             89872686317988888999999999965888888787777488988853788718996553448999999999998533
Q batch____        35 GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYA  114 (643)
Q Consensus        35 ~~~~~~~l~~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  114 (643)
                      ..-++-++|+||+|+||||++--||..+.-.                   |..+-++-.|.-..-.+++.+.+.+.....
T Consensus        89 ~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~-------------------g~~v~li~~D~~R~gA~eQL~~~a~~~~v~  149 (294)
T c1vmaA_          89 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDE-------------------GKSVVLAAADTFRAAAIEQLKIWGERVGAT  149 (294)
T ss_dssp             SSSCEEEEEECCTTSSHHHHHHHHHHHHHHT-------------------TCCEEEEEECTTCHHHHHHHHHHHHHHTCE
T ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHHC-------------------CCCEEEEECCCCCHHHHHHHHHHHHHHCCE
T ss_conf             7896699998068876024899999999967-------------------994899975876864799999999761982


Q ss_pred             H--------------------HCCCCEEEEEECCCCCCHHHH--HHHHHHHH-------CCCCCEEEEEECCCHHHCCHH
Q ss_conf             1--------------------108966999848464888999--99999975-------167865999973986780135
Q batch____       115 P--------------------ARGRFKVYLIDEVHMLSRHSF--NALLKTLE-------EPPEHVKFLLATTDPQKLPVT  165 (643)
Q Consensus       115 ~--------------------~~~~~~v~iide~~~l~~~~~--~~llk~le-------~~~~~~~~i~~~~~~~~~~~~  165 (643)
                      -                    ...+|-++|||-+.+...+..  ..|.+..+       ..|.++++++..+.-...+..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~  229 (294)
T c1vmaA_         150 VISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQ  229 (294)
T ss_dssp             EECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHH
T ss_conf             89748836989999999999997799899981888987857999999999999630356688539998114687899999


Q ss_pred             HHHHHHHCCCCCC
Q ss_conf             8866763158889
Q batch____       166 ILSRCLQFHLKAL  178 (643)
Q Consensus       166 i~src~~~~~~~~  178 (643)
                      +..++..+.+..+
T Consensus       230 ~~~~~~~~~~~~i  242 (294)
T c1vmaA_         230 AKIFKEAVNVTGI  242 (294)
T ss_dssp             HHHHHHHSCCCEE
T ss_pred             HHHHHHCCCCCEE
T ss_conf             9999630899769