45 c3c6cA_ Probab=95.02   E-value=0.31  Score=28.13  Aligned_columns=227  Identities=11%

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE----CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC--------------------
Q ss_conf             899999999999997599899997----17887768999999999999972874168747--------------------
Q batch____       105 LDEADIARESAAIREMGFEHLLLV----TGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ--------------------  160 (377)
Q Consensus       105 ls~eei~~~~~~~~~~G~~~i~l~----~G~~p~~~~~e~i~~~i~~ik~~~~~i~i~~g--------------------  160 (377)
                      .++|||.+.+....+.|+.-+|+-    --+.| ..+.+.|.++++.||+..+.+-+++-                    
T Consensus        25 ~TpeEIa~~A~~~~~AGAsivH~H~Rd~~dG~~-s~d~~~y~eii~~IR~~~pd~ii~~TTg~~~~~~p~~~~~~~~~~~  103 (294)
T c3c6cA_          25 ITPAQIADACVEAAKAGASVAHIHVRDPKTGGG-SRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPE  103 (294)
T ss_dssp             CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCE-ECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTT
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCC
T ss_conf             898999999999987188289982166545770-4688999999999997479958960532212455421000100134


Q ss_pred             ---CCCHHHHHHHHHCCCCEEEECCCCCCHHHH--HHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHH
Q ss_conf             ---999999999996599802010101697786--550578999988999999999997699720012465799886899
Q batch____       161 ---PLAETEYAELKQLGLDGVMVYQETYHEATY--ARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVD  235 (377)
Q Consensus       161 ---~l~~e~~~~LkeaGld~~~~~~Et~~~~~~--~~i~p~~~k~~~~~rl~~~~~a~~~G~~~v~~g~l~Gl~e~~~~d  235 (377)
                         ....+.+..+.+...|..+++.-++|...-  +.+-.+    +++.-.+..+.+++.|+ ..-. .+|-        
T Consensus       104 ~~~~~~~~r~~~~~~~~Pd~aS~~~gs~n~~~~~~~~v~~N----~~~~~~~~~~~~~e~Gv-~pe~-ev~d--------  169 (294)
T c3c6cA_         104 SDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVYLN----TTRTLRAXARRFQELGI-KPEL-EVFS--------  169 (294)
T ss_dssp             CEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEECC----CHHHHHHHHHHHHHHTC-EEEE-EESS--------
T ss_pred             CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECC----CHHHHHHHHHHHHHCCC-CCEE-EEEC--------
T ss_conf             43478889654367518836986667445555676713028----98999999999986299-5158-8716--------


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCC
Q ss_conf             99999999987787388763023101444898854547988899999999999978998700003779789998886171
Q batch____       236 SYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAI  315 (377)
Q Consensus       236 ~~~~l~~l~~L~~~~~~~~~~i~~~~~~P~~gt~~~~~~~~~~e~lk~iAv~Rl~lP~~~I~~st~~~~~~r~~~l~~G~  315 (377)
                       ..++..+..|.++ |..+....+.+.--..+    ..|.+...++.++.    ++|.-..-.....+.+-...+...  
T Consensus       170 -~g~l~~~~~l~~~-G~l~~p~~~~~vlg~~~----g~p~t~~~l~~~l~----~lp~~~~w~v~g~G~~~~~~~~~A--  237 (294)
T c3c6cA_         170 -PGDILFGKQLIEE-GLIDGVPLFQXVLGVLW----GAPASTETXIYQRN----LIPANAQWAAFGIGRDQXPXXAQA--  237 (294)
T ss_dssp             -HHHHHHHHHHHHT-TCSCSSCEEEEECSCTT----SCCSCHHHHHHHHT----TSCTTSEEEEECCGGGHHHHHHHH--
T ss_pred             -HHHHHHHHHHHHC-CCCCCCCEEEEEECCCC----CCCCCHHHHHHHHH----HCCCCCCEEEEECCCCCCHHHHHH--
T ss_conf             -8999999999860-57576715898621577----77778556799998----426888068984173200578899--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf             0002444444564446766434456777899899999999969800
Q batch____       316 NNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQP  361 (377)
Q Consensus       316 ~~l~ag~~~~~gg~~~~~~~~~~~~~~d~rs~~e~~~~I~~~G~~P  361 (377)
                        +.-|.+.=+|=-..---..+..- ++.--+++++++.++.|+.|
T Consensus       238 --~~~GGhvRVGlED~l~~~~G~~a-tNaeLV~~~v~ia~~~gre~  280 (294)
T c3c6cA_         238 --ALLGGNVRVGLEDNLYLSRGVFA-TNGQLVERARTVIEHLGXSV  280 (294)
T ss_dssp             --HHHTCBEEESTTTCCEEETTEEC-CHHHHHHHHHHHHHHTTCEE
T ss_pred             --HHCCCCEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHCCCC
T ss_conf             --84188515502444214678868-98999999999999818899