346 c1vliA_ Probab=30.35   E-value=36  Score=14.23  Aligned_columns=205  Identities=11%

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCC-----------------CCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf             9999999999999759989999717887-----------------76899999999999997287416874799999999
Q batch____       106 DEADIARESAAIREMGFEHLLLVTGEHQ-----------------AKVGMDYFRRHLPALREQFSSLQMEVQPLAETEYA  168 (377)
Q Consensus       106 s~eei~~~~~~~~~~G~~~i~l~~G~~p-----------------~~~~~e~i~~~i~~ik~~~~~i~i~~g~l~~e~~~  168 (377)
                      +.+-..+.++.+++.|+..|-+|+=...                 ...+.+++.++....++.+  +..-.-+.+.+.+.
T Consensus        29 dl~~A~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~G--i~f~sTpfd~~svd  106 (358)
T c1vliA_          29 KLDQAFALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQ--VIFLSTVCDEGSAD  106 (358)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHTT--CEEECBCCSHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCC--CEEEEEECCHHHHH
T ss_conf             7899999999999719978984201421001565563045777531699899999999999759--82998347999999


Q ss_pred             HHHHCCCCEEEE-CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             999659980201-0101697786550578999988999999999997699720012465799886899999999999877
Q batch____       169 ELKQLGLDGVMV-YQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDSYMVAEHLLWLQ  247 (377)
Q Consensus       169 ~LkeaGld~~~~-~~Et~~~~~~~~i~p~~~k~~~~~rl~~~~~a~~~G~~~v~~g~l~Gl~e~~~~d~~~~l~~l~~L~  247 (377)
                      .|.+.|++.+=+ +-|..|-.+.+.+                        -..+--+++-.|-....|+..-+..++.  
T Consensus       107 ~l~~~~v~~~KIaS~el~n~pLL~~~------------------------A~~gkPvilSTGmatl~Ei~~Av~~i~~--  160 (358)
T c1vliA_         107 LLQSTSPSAFKIASYEINHLPLLKYV------------------------ARLNRPXIFSTAGAEISDVHEAWRTIRA--  160 (358)
T ss_dssp             HHHTTCCSCEEECGGGTTCHHHHHHH------------------------HTTCSCEEEECTTCCHHHHHHHHHHHHT--
T ss_pred             HHHHCCCCEEEECHHHCCCHHHHHHH------------------------HHCCCCEEEECCCCCHHHHHHHHHHHHH--
T ss_conf             99863998699841227988999999------------------------6318971851354688999999999996--


Q ss_pred             HHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCC-CC-HHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             873887630231014448988545479888999999999999789987000037-79-7899988861710002444444
Q batch____       248 QHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLSTR-ES-PWFRDRVIPLAINNVSAFSKTQ  325 (377)
Q Consensus       248 ~~~~~~~~~i~~~~~~P~~gt~~~~~~~~~~e~lk~iAv~Rl~lP~~~I~~st~-~~-~~~r~~~l~~G~~~l~ag~~~~  325 (377)
                          .+...+.+-+=.-..++|....      -|+.|..++-.+|+..+-+|.. .+ ...--..+.+|+..+       
T Consensus       161 ----~g~~~i~llhC~s~YP~p~~~~------nL~~i~~L~~~f~~~~vG~SDHt~g~~~~~~aAvalGA~vI-------  223 (358)
T c1vliA_         161 ----EGNNQIAIXHCVAKYPAPPEYS------NLSVIPXLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLI-------  223 (358)
T ss_dssp             ----TTCCCEEEEEECSSSSCCGGGC------CTTHHHHHHHHSTTSEEEEEECCSSSSHHHHHHHHTTCSEE-------
T ss_pred             ----CCCCCEEEEECCCCCCCCHHHC------CHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCEEE-------
T ss_conf             ----7998489995588889886673------74678999975178602147766554035688863030000-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             5644467664344567778998999999999
Q batch____       326 PGGYADNHPELEQFSPHDDRRPEAVAAALTA  356 (377)
Q Consensus       326 ~gg~~~~~~~~~~~~~~d~rs~~e~~~~I~~  356 (377)
                       .-|-.-.....+.+..-..+++|+.+|+..
T Consensus       224 -EKHftldk~~~G~Dh~~Sl~P~el~~lv~~  253 (358)
T c1vliA_         224 -EKHFTIDKNLPGADHSFALNPDELKEXVDG  253 (358)
T ss_dssp             -EEEBCSCTTSSCSSCTTSBCHHHHHHHHHH
T ss_pred             -EEEECCCCCCCCCCEEEECCHHHHHHHHHH
T ss_conf             -224214634789980233387999999999