88 c3cfzA_ Probab=98.53   E-value=1.8e-05  Score=47.87  Aligned_columns=235  Identities=12%

Q ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHCCCC-CEEEECCHHHHHHHHCCCCCCEEEEE
Q ss_conf             8449999963982699999998774215-980589843997899999615982-58974597899997302796179983
Q batch____        31 AKHIKVGVINGAEQDVAEVAKKVAKEKY-GLDVELVGFSGSLLPNDATNHGEL-DANVFQHRPFLEQDNQAHGYKLVAVG  108 (272)
Q Consensus        31 ~~~l~ig~~~~~~~~~~~~~~~~~~k~~-G~~v~~~~~~~~~~~~~~l~~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~  108 (272)
                      +.+|+| +..+.....++.+.+.|+|++ |++|+++..++.+...+.+.+|+. |+....+...+....+..-.......
T Consensus         1 K~tLtv-~~~g~~~~~~~~~i~~Fe~~~P~I~V~~~~~~~~~~~~~~~a~g~~pDv~~~~~~~~~~~~~~~g~l~~~~~~   79 (289)
T c3cfzA_           1 KIVLKI-FHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVRKIIDLGKKADILASADYSLIPQMMMPKYADWYVMF   79 (289)
T ss_dssp             CEEEEE-EEEGGGHHHHHHHHHHHHHHCTTEEEEEEEECHHHHHHHHHTSCCCCSEEEESSTTHHHHHTTTTTCSCCEEE
T ss_pred             CEEEEE-EECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCHH
T ss_conf             939999-9638848999999999998779848999977989999999967899869998594589999988883554100


Q ss_pred             ECCEEEEEEECCCCCCHHHHCC---------CCEEEECCCCCHHHHHHHHHHH--------------------CCCCCCC
Q ss_conf             0110001330466566666057---------9778623776025899999997--------------------6981155
Q batch____       109 NTFVFPMAGYSKKIKTVAQIKE---------GATVAIPNDPTNLGRALLLLQK--------------------EKLITLK  159 (272)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~dl~~---------gk~~~~~~~~~~~~~~~~~l~~--------------------~g~~~~~  159 (272)
                      ......................         .....................-                    .......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (289)
T c3cfzA_          80 ARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPCGYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEE  159 (289)
T ss_dssp             EECCEEEEECTTSTTTTTCCTTTHHHHTTSTTCCEEEECTTTCHHHHHHHHHHHHHHHHHTCTTHHHHHTGGGBSCEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             12630001226774233224775144453054368721567887660247876663101456665432234332200111


Q ss_pred             CCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCEE---------------------
Q ss_conf             64443210122210345518997688899999626883399965578987401546427---------------------
Q batch____       160 EGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS---------------------  218 (272)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~vd~~~~~~~~~~~~~~~~~~~~---------------------  218 (272)
                      ................................+..+..+....+.......+.......                     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (289)
T c3cfzA_         160 NNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYKSVANQHHLKYIELPKEINLGYYEYADTYKKVALKI  239 (289)
T ss_dssp             ETTEEEEEECSSCCBCTTTEEEESSGGGGHHHHHTTSSSEEEEEHHHHHHTTCEEECCCTTTSSCCGGGHHHHTTEEEEE
T ss_pred             HCCCHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHCCCHHCCCCCCC
T ss_conf             00100000101100134564454205899999856873101041278873786169921024321100000000246221


Q ss_pred             --EECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
Q ss_conf             --86158888678999994444781799999999789899999986149851
Q batch____       219 --VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGA  268 (272)
Q Consensus       219 --~~~~~~~~~~~~~~~~~~~~~~~~~~k~fi~~l~s~e~~~~i~~~~~g~~  268 (272)
                        ........+....+++.+..+|++++++|++++.|+|  +++++...-.+
T Consensus       240 ~~~~~~~~~~~~~~~~~I~~~s~n~e~A~~Fi~fl~s~e--~il~~~G~~Pv  289 (289)
T c3cfzA_         240 IAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGHP--EVLENNGQPAI  289 (289)
T ss_dssp             GGGTEEEECCCCEEEEECCTTCTTHHHHHHHHHHHHHCT--HHHHTTTCCBC
T ss_pred             CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCH--HHHHHCCCCCC
T ss_conf             234687654112236999888999899999999984918--89998489999