171 c1vmaA_ Probab=98.32   E-value=2.2e-05  Score=49.58  Aligned_columns=146  Identities=18%

Q ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             18998799997589999789999999995885476788626999875227877541003899999999999998459849
Q batch____        24 HGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVV  103 (201)
Q Consensus        24 ~~~k~~iI~i~G~~GSGKSTiA~~La~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  103 (201)
                      .+.+|.+|+|+||+|+||||.+..||.++...+..+..+.-+..|                 .-...+........+..+
T Consensus        88 ~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R-----------------~gA~eQL~~~a~~~~v~~  150 (294)
T c1vmaA_          88 PPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR-----------------AAAIEQLKIWGERVGATV  150 (294)
T ss_dssp             CSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC-----------------HHHHHHHHHHHHHHTCEE
T ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-----------------HHHHHHHHHHHHHHCCEE
T ss_conf             578966999980688760248999999999679948999758768-----------------647999999997619828


Q ss_pred             EEEEECCCHHH-HHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC-----CCCCCEEEE
Q ss_conf             97310176999-999999515688079998689899999731121111121244426866763056-----428808991
Q batch____       104 LTAFISPHRAE-RQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEA-----PESAEIHLN  177 (201)
Q Consensus       104 ~~~~~~~~~~~-~~~~~~~~~~~~~~~I~l~~~~ev~~~R~~~r~~~~~~~~~~~~~~~~~~~~e~-----~~~~dl~Id  177 (201)
                      ........... .......+....+-+|++|.+           +...........+..+......     |....+++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTa-----------Gr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~  219 (294)
T c1vmaA_         151 ISHSEGADPAAVAFDAVAHALARNKDVVIIDTA-----------GRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVID  219 (294)
T ss_dssp             ECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEEC-----------CCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCCEEEECCC-----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf             974883698999999999999779989998188-----------898785799999999999963035668853999811


Q ss_pred             CCCCHHHHHHHHHHHHHHCCC
Q ss_conf             898989999999999997898
Q batch____       178 GEQLVTNLVQQLLDLLRQNDI  198 (201)
Q Consensus       178 ~~~s~~e~v~~Il~~L~~~~~  198 (201)
                      .+ .-.+.++++..+-+.-++
T Consensus       220 a~-~~~~~~~~~~~~~~~~~~  239 (294)
T c1vmaA_         220 AT-TGQNGLVQAKIFKEAVNV  239 (294)
T ss_dssp             GG-GHHHHHHHHHHHHHHSCC
T ss_pred             CC-CCHHHHHHHHHHHHCCCC
T ss_conf             46-878999999999630899