Phyre 2 Results for P0AA37

Email | l.a.kelley@imperial.ac.uk
Description | P0AA37
Date | Thu Jan 5 11:11:49 GMT 2012
Unique Job ID | 8589e1fb10d2983a

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2i82D_ |
|  | 100.0 | 97 | PDB header:lyase/rna Chain: D: PDB Molecule:ribosomal large subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridine synthase rlua: indirect2 sequence readout through protein-induced rna structure
2 | d1v9fa_ |
|  | 100.0 | 38 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
3 | c1v9fA_ |
|  | 100.0 | 38 | PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: crystal structure of catalytic domain of pseudouridine2 synthase rlud from escherichia coli
4 | c1qyuA_ |
|  | 100.0 | 36 | PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: structure of the catalytic domain of 23s rrna pseudouridine2 synthase rlud
5 | d1v9ka_ |
|  | 100.0 | 39 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
6 | c1vioA_ |
|  | 100.0 | 18 | PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: crystal structure of pseudouridylate synthase
7 | c1kskA_ |
|  | 100.0 | 16 | PDB header:lyase Chain: A: PDB Molecule:ribosomal small subunit pseudouridine synthase a; PDBTitle: structure of rsua
8 | c2omlA_ |
|  | 100.0 | 18 | PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase e; PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
9 | c2olwB_ |
|  | 100.0 | 18 | PDB header:isomerase Chain: B: PDB Molecule:ribosomal large subunit pseudouridine synthase e; PDBTitle: crystal structure of e. coli pseudouridine synthase rlue
10 | c3dh3C_ |
|  | 100.0 | 14 | PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate
11 | d1vioa1 |
|  | 100.0 | 19 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
12 | d1kska4 |
|  | 100.0 | 17 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase RsuA/RluD
13 | c2gmlA_ |
|  | 100.0 | 16 | PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of catalytic domain of e.coli rluf
14 | d1k8wa5 |
|  | 97.6 | 17 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
15 | d2ey4a2 |
|  | 97.6 | 30 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
16 | d2apoa2 |
|  | 97.5 | 32 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
17 | d1sgva2 |
|  | 97.5 | 29 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
18 | c2ey4A_ |
|  | 97.5 | 32 | PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex
19 | d1r3ea2 |
|  | 97.5 | 22 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
20 | c2apoA_ |
|  | 97.3 | 30 | PDB header:isomerase/rna binding protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of the methanococcus jannaschii cbf52 nop10 complex
21 | c3uaiA_ |
| not modelled | 97.3 | 29 | PDB header:isomerase/chaperone Chain: A: PDB Molecule:h/aca ribonucleoprotein complex subunit 4; PDBTitle: structure of the shq1-cbf5-nop10-gar1 complex from saccharomyces2 cerevisiae
22 | c1k8wA_ |
| not modelled | 97.2 | 19 | PDB header:lyase/rna Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: crystal structure of the e. coli pseudouridine synthase2 trub bound to a t stem-loop rna
23 | c1sgvA_ |
| not modelled | 97.2 | 28 | PDB header:lyase Chain: A: PDB Molecule:trna pseudouridine synthase b; PDBTitle: structure of trna psi55 pseudouridine synthase (trub)
24 | c1ze2B_ |
| not modelled | 95.6 | 27 | PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate
25 | c2k6pA_ |
| not modelled | 94.6 | 14 | PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein hp_1423; PDBTitle: solution structure of hypothetical protein, hp1423
26 | c1f5nA_ |
| not modelled | 31.0 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp.
27 | c2zodB_ |
| not modelled | 23.0 | 16 | PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of selenophosphate synthetase from2 aquifex aeolicus
28 | d2zoda2 |
| not modelled | 22.1 | 17 | Fold:PurM C-terminal domain-like Superfamily:PurM C-terminal domain-like Family:PurM C-terminal domain-like
29 | c2zauB_ |
| not modelled | 21.1 | 23 | PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of an n-terminally truncated2 selenophosphate synthetase from aquifex aeolicus
30 | c1mzwB_ |
| not modelled | 16.9 | 38 | PDB header:isomerase Chain: B: PDB Molecule:u4/u6 snrnp 60kda protein; PDBTitle: crystal structure of a u4/u6 snrnp complex between human2 spliceosomal cyclophilin h and a u4/u6-60k peptide
31 | d1vjpa1 |
| not modelled | 16.8 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
32 | d1f46a_ |
| not modelled | 14.6 | 18 | Fold:TBP-like Superfamily:Cell-division protein ZipA, C-terminal domain Family:Cell-division protein ZipA, C-terminal domain
33 | d1emsa1 |
| not modelled | 13.2 | 29 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
34 | d1gr0a1 |
| not modelled | 12.4 | 21 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
35 | d1fita_ |
| not modelled | 11.7 | 6 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
36 | d1k8ga2 |
| not modelled | 11.6 | 14 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
37 | c2p14A_ |
| not modelled | 11.1 | 10 | PDB header:hydrolase Chain: A: PDB Molecule:heterodimeric restriction endonuclease r.bspd6i small PDBTitle: crystal structure of small subunit (r.bspd6i2) of the heterodimeric2 restriction endonuclease r.bspd6i
38 | d1jb7a2 |
| not modelled | 10.9 | 14 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
39 | c3n1tE_ |
| not modelled | 9.7 | 38 | PDB header:hydrolase Chain: E: PDB Molecule:hit-like protein hint; PDBTitle: crystal structure of the h101a mutant echint gmp complex
40 | d1rzya_ |
| not modelled | 9.7 | 25 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins
41 | c1u1iC_ |
| not modelled | 9.5 | 18 | PDB header:isomerase Chain: C: PDB Molecule:myo-inositol-1-phosphate synthase; PDBTitle: myo-inositol phosphate synthase mips from a. fulgidus
42 | c3l7xA_ |
| not modelled | 9.3 | 13 | PDB header:cell cycle Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
43 | d1okia1 |
| not modelled | 8.1 | 20 | Fold:gamma-Crystallin-like Superfamily:gamma-Crystallin-like Family:Crystallins/Ca-binding development proteins
44 | c2lkyA_ |
| not modelled | 7.7 | 27 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of msmeg_1053, the second duf3349 annotated protein2 in the genome of mycobacterium smegmatis, seattle structural genomics3 center for infectious disease target mysma.17112.b
45 | c1gr0A_ |
| not modelled | 7.5 | 25 | PDB header:isomerase Chain: A: PDB Molecule:inositol-3-phosphate synthase; PDBTitle: myo-inositol 1-phosphate synthase from mycobacterium2 tuberculosis in complex with nad and zinc.
46 | c2do5A_ |
| not modelled | 7.5 | 31 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:splicing factor 3b subunit 2; PDBTitle: solution structure of the sap domain of human splicing2 factor 3b subunit 2
47 | c3cinA_ |
| not modelled | 7.4 | 16 | PDB header:isomerase Chain: A: PDB Molecule:myo-inositol-1-phosphate synthase-related protein; PDBTitle: crystal structure of a myo-inositol-1-phosphate synthase-related2 protein (tm_1419) from thermotoga maritima msb8 at 1.70 a resolution
48 | c3o0mB_ |
| not modelled | 7.2 | 13 | PDB header:hydrolase Chain: B: PDB Molecule:hit family protein; PDBTitle: crystal structure of a zn-bound histidine triad family protein from2 mycobacterium smegmatis
49 | d1guqa2 |
| not modelled | 7.2 | 17 | Fold:HIT-like Superfamily:HIT-like Family:Hexose-1-phosphate uridylyltransferase
50 | d2al1a1 |
| not modelled | 6.8 | 16 | Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:Enolase
51 | c2oi2A_ |
| not modelled | 6.5 | 17 | PDB header:transferase Chain: A: PDB Molecule:mevalonate kinase; PDBTitle: streptococcus pneumoniae mevalonate kinase in complex with2 diphosphomevalonate
52 | d2aaaa1 |
| not modelled | 6.4 | 21 | Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain
53 | c3p0tB_ |
| not modelled | 6.4 | 25 | PDB header:unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an hit-like protein from mycobacterium2 paratuberculosis
54 | c2kvcA_ |
| not modelled | 6.0 | 27 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: solution structure of the mycobacterium tuberculosis protein rv0543c,2 a member of the duf3349 superfamily. seattle structural genomics3 center for infectious disease target mytud.17112.a
55 | c1emsB_ |
| not modelled | 5.8 | 33 | PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein
56 | c2voiB_ |
| not modelled | 5.8 | 27 | PDB header:apoptosis Chain: B: PDB Molecule:bh3-interacting domain death agonist p13; PDBTitle: structure of mouse a1 bound to the bid bh3-domain
57 | d2dk4a1 |
| not modelled | 5.7 | 23 | Fold:LEM/SAP HeH motif Superfamily:PRP4-like Family:PRP4-like
58 | d2oika1 |
| not modelled | 5.5 | 50 | Fold:HIT-like Superfamily:HIT-like Family:HIT (HINT, histidine triad) family of protein kinase-interacting proteins