09/01/2012 20:00:19 : INFO  : Run start: Mon Jan  9 20:00:19 GMT 2012
09/01/2012 20:00:22 : INFO  : Initialised job
09/01/2012 20:00:23 : INFO  : Renaming log file 'phyre2_20120109_200019.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8589e1fb10d2983a/phyre_20120109_200019.log'
09/01/2012 20:00:24 : INFO  : Initialised job:
Sequence
>batch____
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV
HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP
NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF
YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF

09/01/2012 20:00:24 : INFO  : Checked sequence
09/01/2012 20:00:26 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 20:00:26 : INFO  : PSI-BLAST 3 iterations
09/01/2012 20:02:19 : INFO  : PSI-BLAST 5 iterations
09/01/2012 20:04:18 : INFO  : Finished PSI-BLAST
09/01/2012 20:04:21 : INFO  : Running Buildali to generate a3m file
09/01/2012 20:16:50 : INFO  : Converting to HMM
09/01/2012 20:16:53 : INFO  : Calibrating HMM
09/01/2012 20:17:01 : INFO  : Searching HMM database
09/01/2012 20:21:41 : INFO  : Finished buildali
09/01/2012 20:21:41 : INFO  : Predicting secondary structure
09/01/2012 20:21:44 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 20:21:44 : INFO  : Predicting Disordered regions
09/01/2012 20:21:46 : INFO  : Predicted Disorder (Disopred)
09/01/2012 20:21:46 : INFO  : Running memsat_svm check
09/01/2012 20:23:42 : INFO  : Running memsat_svm full
09/01/2012 20:28:59 : INFO  : Predicted Transmembrane (memsat_svm) ID '8589e1fb10d2983a'
09/01/2012 20:29:00 : INFO  : Initialising fold library search
09/01/2012 20:29:01 : INFO  : Initialised search input
09/01/2012 20:29:02 : INFO  : Building Ensemble models
09/01/2012 20:29:03 : INFO  : Building hh.c2i82D_.model.1.pdb
09/01/2012 20:29:10 : INFO  : Building c2i82D_.1.pdb
09/01/2012 20:29:15 : INFO  : Building d1v9fa_.2.pdb
09/01/2012 20:29:20 : INFO  : Building c1v9fA_.3.pdb
09/01/2012 20:29:26 : INFO  : Building c1qyuA_.4.pdb
09/01/2012 20:29:31 : INFO  : Building d1v9ka_.5.pdb
09/01/2012 20:29:36 : INFO  : Building c1vioA_.6.pdb
09/01/2012 20:29:41 : INFO  : Building c1kskA_.7.pdb
09/01/2012 20:29:46 : INFO  : Building c2omlA_.8.pdb
09/01/2012 20:29:51 : INFO  : Building c2olwB_.9.pdb
09/01/2012 20:29:57 : INFO  : Building c3dh3C_.10.pdb
09/01/2012 20:30:03 : INFO  : Building d1vioa1.11.pdb
09/01/2012 20:30:09 : INFO  : Building d1kska4.12.pdb
09/01/2012 20:30:13 : INFO  : Building c2gmlA_.13.pdb
09/01/2012 20:30:20 : INFO  : Building d1k8wa5.14.pdb
09/01/2012 20:30:24 : INFO  : Building d2ey4a2.15.pdb
09/01/2012 20:30:30 : INFO  : Building d2apoa2.16.pdb
09/01/2012 20:30:35 : INFO  : Building d1sgva2.17.pdb
09/01/2012 20:30:41 : INFO  : Building c2ey4A_.18.pdb
09/01/2012 20:30:45 : INFO  : Building d1r3ea2.19.pdb
09/01/2012 20:30:50 : INFO  : Building c2apoA_.20.pdb
09/01/2012 20:31:04 : INFO  : Finished HH model building
09/01/2012 20:31:04 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 20:31:44 : INFO  : html domain output complete ID '8589e1fb10d2983a'
09/01/2012 21:07:09 : INFO  : Run end  : Mon Jan  9 21:07:09 GMT 2012
