>ss_pred
CCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEECCEEECCCCCEEEEEECCCCEECCEEEEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCC
>ss_conf
973136878778842895629889995698817707898763135899998516864153204777601388865999999998888749666999998716888643599632354577650379976998573168999998389849999999630121999999982991782675688201255771302665868537889768999748889
>batch____
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>UniRef50_P59831(1-222:222) Ribosomal large subunit pseudouridine synthase A n=20 Tax=Proteobacteria RepID=RLUA_HAEDU  E=1e-75 s/c=1.28 id=61% cov=100%
MALIEYHPPLNPFLEEVYRDNHIVVINKPSGLLSVPGNRPEYYDSVMTRVQQRYGFAEPAHRLDMATSGIILLALSKVAEKELKRQFRDREPKKHYIALLWGKLGDrvgQTGEINFPLICDWENRPRQKICYERGKKATTHYEVLEHLANNTTRVKFTPITGRSHQLRVHSLALGHPIIGDKFYANPLAKSLAPRLCLHAESLTIAHPISAELMTFNTEPTF
>UniRef50_Q8DCG0(1-223:250) Ribosomal large subunit pseudouridine synthase A n=82 Tax=Proteobacteria RepID=RLUA_VIBVU  E=8e-66 s/c=1.13 id=55% cov=100%
MAMLEYLPPTDPWTEIIFEDDHILAVNKPSGLLSVPGRLPEHHDSMWSRLQEQYPEIQVVHRLDMSTSGLMVFAKNKRAEAALKKQFQYRLTHKVYYARVWGHVEADSGMIDLPLICDWPNRPMQKVCHEHGKPSQTAFQVAkrEVHANGAQTTIMRllPVTGRSHQLRVHMQALGHPIVGDEFYAQGDAFTFSERLELHAAELSFYHPKSHWLRSLFVPCDF
>UniRef50_B1Y046(39-256:256) Pseudouridine synthase n=43 Tax=Proteobacteria RepID=B1Y046_LEPCP   E=1e-52 s/c=0.95 id=52% cov=97%
--------PSEPLIDILHHDDSLLVVRKPAGLLSVPGRGEHLQDCVAARVQAIWPDALIVHRLDMATSGLMVMARGPAAQRALGSAFEHRSVTKQYVAVVAGDVAGDAGSVDLPLCADWPNRPRQKVDAAMGRPSLTHWRRATPAHEGSttgdidrTRLELEPVTGRSHQLRVHLLALGHPILGDTLYAPDAVQRMAPRLLLHASRIALPHPAGGGICVFSDPPAF
>UniRef50_C5BU65(4-208:208) Pseudouridine synthase for 23S rRNA and tRNAphe n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BU65_TERTT  E=2e-47 s/c=0.93 id=49% cov=94%
-------------LAIIYQDDHIIAINKPAGLLTVPGLAT--PDNAFDQLVHQHPNSRVVHRLDMATSGLVIFPQSHESLVRFGRLFEQRKMTKTYTATVAGIVAEDRGEITLPLICDWPNRPKQKVDLEQGKHAHTQYKVLERRLDlQTTRIELTPITGRSHQLRVHMQQLGHPILGDAFYAPDAIQQASDRLLLHATTLEFVHPFTQCPTSIHCEPDF
>UniRef50_B7I1Q3(29-229:229) Dual specificity pseudouridine synthase n=17 Tax=Acinetobacter RepID=B7I1Q3_ACIB5  E=8e-44 s/c=0.89 id=46% cov=92%
------------------EDDDLIVVDKPAGLLSVMGRLPEHHDSAYLRVLEKFPLAKVTHRLDMATSGLLMFAKHRDAEVAVSKMFQARTVKKHYIALVQGQVK-QEGRVEVPLITDWENRPRQIVHFELGKHAKTLFQPLVYdETTDQSRVLLEPVTGRSHQLRVHMMHIGHPIMGDKLYHPEPKRFHLNRMALHAAYLAFQHPLKGTDVVIESQVPF
>UniRef50_Q6FCX9(9-214:214) Pseudouridine synthase n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FCX9_ACIAD  E=1e-39 s/c=0.80 id=44% cov=93%
----------------IHRDNDFMVIHKPAGILSVPGKGDALFDSLLVRLVEIEPKTLLIHRLDRDTSGILVFGLNKMAQSAISRQFQERQTDKIYQALVVGEVY-GEGLIDVPVVYDAARPPLHIADPAHHKPAQTEWQALEQFELNgkmVTRMRLTPITGRSHQLRVHMQYIGHPIVGDTLYASLADQQLVSRLCLHAEQLSFYHPKTGELVTFHCPVPF
>UniRef50_Q26D11(351-561:561) Pseudouridine synthase n=2 Tax=Flavobacteria RepID=Q26D11_9BACT   E=2e-38 s/c=0.76 id=46% cov=94%
------NPGIDKTMEVIYEDDAIIIVNKPEEFLSVPGK--TIKDSVYSRLKELYPDATGpilVHRLDMSTSGILVATKNLEYYHFIQEQFINRTISKRYVALLNGVLENNEGMIELPLRVDLDNRPTQLVCYEYGKSARTKYQVLERREKETL-VHFYPITGRTHQLRVHAAhasGLNAPIVGDDLYGTA-----TNRLHLHAEFIKFIHPITHKTVSFKAPVPF
>UniRef50_B7BE87(337-547:551) Pseudouridine synthase n=8 Tax=Bacteroidales RepID=B7BE87_9PORP   E=8e-36 s/c=0.72 id=48% cov=91%
-------------LEIVYEDESLLVVNKPAGMLSVPGKSD--VDSVYQRVRRMYPGATGpmvVHRLDMATSGLMLVAKTKEVHQNLQAQFKNRTVCKRYVAWLDGIVEEKEGHLELPLRPDPEDRPRQVVDVVHGKPAVTDYRVLRYGGCKGGLrttptvVSFVPKTGRTHQLRVHSahpLGLNAPIVGDELYGKK-----ADRLYLHAEYLGFTHPVSGVYMEVEKEAGF
>UniRef50_D1W0M0(347-556:566) Pseudouridine synthase n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1W0M0_9BACT  E=7e-34 s/c=0.69 id=47% cov=93%
---------QHSQLHVVYEDDALIVVDKPAGILSVPGR--SQRPSVYSILRSQMPSSVelfSVHRLDMATSGLLILAKNSVVYRHLQRQFRTHHIQKEYIAILEGALSQREGVVTLPLRPDPFDRPRQVVDWEHGKKAVTSYRVLNVRHGKTW-VALFPETGRTHQLRMHCAhaeGLNCPILGDPLYGH-----HANRLYLHATSITFEHPISGQLLTLHAqpPADF
>UniRef50_B1ZYX0(80-293:311) Pseudouridine synthase n=4 Tax=Verrucomicrobia RepID=B1ZYX0_OPITP   E=3e-32 s/c=0.65 id=44% cov=92%
-------------LTVLFEDKHMLAVNKAAGMVVHPG-VATSEDTLVHALLAHCAGSLSgiggverpgiVHRLDKETTGVIVVAKTDAAHRALADQFATRTLKKEYVALVAGVPRLLSGSIDRA-IARHPVHRHRMTVGEGGRPARTDWELVEAFGDIGALVRCRIFTGRTHQIRVHLKSLGHPILGDALYGwKPEPRlATQPaRVMLHAEHLVLTHPISGKELDLRAP---
>UniRef50_B8J173(75-291:525) Pseudouridine synthase, RluA family n=2 Tax=Desulfovibrio RepID=B8J173_DESDA  E=1e-29 s/c=0.61 id=45% cov=92%
--------PEEGHLELLWQDDHLVVCNKPAGLTvhpcpSCP------EQTLVQRLLGRFPQLSRlegqrpgiVHRLDKDTSGLLVVALTEADCLALAAAFAERQVHKEYLALVSGLP-PLEGQCREPLGRHPTAKIKMAVVPEDqgGRNAFTEWRRLWNTDDGSVSLLAVRIhTGRTHQIRVHMTHLGYPLLGDRLYAPKAVQNMAPRQMLHAWRLGFTHPASGEDMRFTCP---
>UniRef50_Q82WZ5(109-320:344) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Nitrosomonas RepID=RLUD_NITEU  E=3e-28 s/c=0.60 id=40% cov=91%
-------------LKILFEDDHLIIIDKPAGLVVHPGNGNWHGTLLNALLNHapqlsQVPRAGIVHRLDKDTTGLLVVAKTIEAQFDLARQLQQRTVKRHYLALVLGKLE-KDGVVDAP-IGRHPIHRTRMAVVQNGKPARTHYRVLEkFTASTLLHCSLE--TGRTHQIRVHLLSIGHPLAGDPVYgrtspdpSTADAVVRLPRQALHAWQLELTHPHSGQILLWESP---
>UniRef50_B8CCD9(92-337:337) Predicted protein (Fragment) n=2 Tax=Thalassiosira pseudonana RepID=B8CCD9_THAPS  E=6e-28 s/c=0.51 id=40% cov=93%
-------------LDVVYEDEHIVVINKPSGVLTVPGK---DDNPSLNKVVFERFGCESnrmdkmvVHRLGMDTSGLVVFARTNSALRELNSLFRTRKVTRKYEALVCGHLAKDSGDIDLSLMRDYealiglDSGEVGKKLLESPKESMTKFEVIskeEMNGKKVTRIALTSISGRTHQLNVHCAAIGHPIVGDTVYgfggeAAPNggleesdlpedrasealqkdiAEAVAGKpMCVHAKSISFDHPVTKEALSFDCAAPF
>UniRef50_UPI00016B2413(177-377:379) ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=3 Tax=candidate division TM7 RepID=UPI00016B2413  E=1e-27 s/c=0.62 id=42% cov=89%
----------------IYEDNDIIVINKPAGMLThAKGAIAEEFTAAdivkpITNYKADTNRPGIIHRLDRNTSGVLLMVKNSDAASKIQKQFSQRTVKKTYYAIVCGIPYQHKALIDLP-IERNPSRPSTFRVGVNGKSAQTSYEVErSIIKKNISLIKLQPKTGRTHQLRVHMQYLNTPILGDLVYGGKPAE----RMFLHAESLEVTLLS-GERKVFKAP---
>UniRef50_Q0BUM2(122-334:366) Pseudouridine synthase n=12 Tax=Acetobacteraceae RepID=Q0BUM2_GRABC   E=1e-27 s/c=0.59 id=46% cov=87%
---------------ILYKDDHLIVLNKPSGLPSQGGpGITRHLDGLLDglRFGRD-DRPRLVHRLDRDTSGVIVIARSPGVAAKLAALFRTRETEKVYWAVVAGRPVPVEGRIDRPLLRQ--NDRNEPVVLADRKdrdkvTAITDYRTLDHAARKLAWLELRPLTGRMHQLRVHCAAMDAPILGDERYGSwrntdergvrntALVEGLSRRLHLHARRLSLPHPAGG-----------
>UniRef50_C1ZGS9(86-322:345) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGS9_PLALI  E=2e-27 s/c=0.52 id=43% cov=95%
--------PEDIPLDILYDDEYLCVINKTANMIVHPGRgnyrgtlagaLQFHFDS-LSDVAGQY-RAGIVHRLDRDTSGVLVVAKDNTVHQHLSRQFEERSVEKEYHAIVWGEMQFDADYVETYVRVSFRNRERMMVCppGDNARQAATFYEVQQRFRGFTY-VKLQPQTGRTHQLRVHMHHLGHPIIADRLYegktcvklsdilpETPEEadETLIDRQALHARRLAFNHPVTKKRMVFEAplPADF
>UniRef50_Q1ILA4(77-316:333) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILA4_ACIBL  E=1e-26 s/c=0.51 id=41% cov=96%
--------PEDIPLDVVYEDDDLAVINKPAGMMvhVGAGATEEERNRgtlVNALLYRFRALSEVggdmrpgiVHRLDKETSGLIVVAKNDVAHRKLAEQFSSRRVHKKYVALVHGWPKKLKGTINLPIARDMSRRTRMTTRGSGGRDALSHYEVkekIESPYGKFALVEVKIETGRTHQIRVHMASLGHPVVGDTLYGAPgELRvtkalkgmpskmASLERNFLHAAEIELQQPATGKALRFvtKVPA--
>UniRef50_A6C0W7(83-323:342) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W7_9PLAN  E=1e-26 s/c=0.51 id=42% cov=95%
----NRLPPEDIPIDIVYEDDWIAIINKPSDMIVHPGK-GNYAGTLAGALQYHFDQLSDvagqyrpgiVHRLDRNTSGIMVVAKDNQVHAKLSAQFEKRDVQKEYRAIVWGRMEFDTDYID-TFMCVHPRaREKMIVCDEGGnaRNAFTYYEVIErYQAFTYVR--LKPRTGRTHQLRVHMQHIGHSIVADRVYgghkslkmkslgiqaeadaAELESDVLIERQALHAYCLEFFHPQSGKPMKFEAP---
>UniRef50_Q9KQH0(97-302:315) Ribosomal large subunit pseudouridine synthase C n=59 Tax=Proteobacteria RepID=RLUC_VIBCH  E=2e-26 s/c=0.59 id=39% cov=91%
---------------IVYEDDHLLILNKPSG-TAVHGGSGLHFGAIEA-LRALRPQArflELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVR--VNPNGKPSETRFRILEKFAEATL-VQASPVTGRTHQIRVHTQYMGHPIawddrYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLE-
>UniRef50_Q8ZQ16(94-305:319) Ribosomal large subunit pseudouridine synthase C n=110 Tax=Gammaproteobacteria RepID=RLUC_SALTY  E=2e-26 s/c=0.57 id=42% cov=92%
---------------ILYEDDHILVLNKPSGTAVHGG--SGLSFGVIEGLRALRPEArflELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKTVQAPLLKNILQSGERIVrVSQEGKPSETRFKVEERYAFATL-VRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDrefdqqlTEAGTGLKRLFLHAAALKFTHPGTGEVMRIEAPMD-
>UniRef50_Q1DCE5(77-285:310) Pseudouridine synthase, RluA family n=2 Tax=Cystobacterineae RepID=Q1DCE5_MYXXD  E=3e-26 s/c=0.57 id=44% cov=92%
--------PPAPELRVLYEDADVIAVDKPAGVSAQPteGRVGDSlVDLVGAKLGR---PAGLVHRLDRETSGVTVFGKTAEATSALAAEFREGRARKRYVA-ATGPGLPPSGTVDLPLSKD-PSRPGrwRATRAANGVPALTDFHTLS-SGPAFCVVELLPHTGRTHQLRAHLTALGAPILGDARYGG-AARAegvEAPRCLLHAQALELGHPRTGKLLRIEAP---
>UniRef50_C6J6E3(87-303:321) Pseudouridine synthase n=2 Tax=Bacillales RepID=C6J6E3_9BACL   E=3e-26 s/c=0.55 id=40% cov=90%
---------------IVYEDEALLIVNKAAGLIVHP--THGHYTGTLANGVVYYWQEKGekfrfrpVHRLDQETSGLIAIAKNAYVHQHISEQLIAGEVTKKYTALVHGCPAVPEGTIDGPIDRD-PAEPHRRIVTPSGYPSLTYYKVAEAYGDG-ARVELRLGTGRTHQIRVHMTSIGHPLIGDKFYGMPGlaelpapARERIARLdaaigrqALHASELGFRHPLTGEALTFKS----
>UniRef50_B8CWM0(77-296:308) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWM0_HALOH  E=5e-26 s/c=0.55 id=40% cov=95%
--------PVEMDLDIIYEDKDILVLNKNAGLVVhpAPGNHENtlvnaliaYCDNLSTISGVNRPGI--VHRLDKDTSGVMVIAKNDISHRKLVEQFKQRKTKKYYRTLLKGELPYKEGKIDAPIGRDPHDRKKMAVTRKNSKKAVTYFKVLEFFRDHSyVEVELK--TGRTHQIRVHFSYMGFPVVGDSIYGKKRNRLQATRQLLHAYRLGFYHPRNDKWVEYKAslPDDF
>UniRef50_Q8XYX8(116-336:358) Ribosomal large subunit pseudouridine synthase D n=94 Tax=Proteobacteria RepID=RLUD_RALSO  E=6e-26 s/c=0.54 id=41% cov=92%
-------------LDVVYEDDTLLVINKPAGLVVHPA-AGNWSGTVLNGLLHRYPQAAGlpragiVHRLDKETSGLMVVARTLPAQTDLVRQLQARTVKRTYLALVWGE-TPEAGTIDAPIGRDPRDRTRMAIIeTASGKPARTHFKTLDVVDLGRAQVSLVQCqleTGRTHQIRVHFESEGHPLLGDPVYTRNFRRGrpqtiKAPlpapfaRQALHAVRLGLVHPASGQSVHWHA----
>UniRef50_Q3ABZ7(77-291:305) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q3ABZ7_CARHZ   E=7e-26 s/c=0.55 id=37% cov=94%
--------PEEIPLDIVYEDEDLVVVNKKAGMVVHPA--EGNWDGTLVNALLYHCQNLSgiggvlrpgiVHRLDKDTSGLLVVAKNDLAHQSLAEQIKEKKAVREYWTIVHGYLKNKEGIIDLP-IGRHPRDRQKMAVVSNGKTAQTVYKVLEEFNKGFTLIQAKLLTGRTHQIRVHFSYLGHPVLGDPKYGHQNNPFGVKRQMLHAIKLSFIHPRSGELLEFTAP---
>UniRef50_B9Y836(75-288:307) Pseudouridine synthase n=3 Tax=Firmicutes RepID=B9Y836_9FIRM   E=1e-25 s/c=0.56 id=40% cov=92%
--------PQEMALNVVYEDHDVIVINKPKGLVVHPGpgnpdhtlvnglLWHCHDLSGINGVLR----PGIVHRIDKDTSGLIVACKNDNAHQSLAKQLAEKTAGRQYYALVHGVINHEYGTIDAPIGRDEKDRQKMAVTEKNSRPAITHFKVVE-RFDNYTLVSCRLETGRTHQIRVHMQYIGFPIVGDPKYS---LRKTLPTqgQMLHAYQLSFTHPSTGERMTFEAP---
>UniRef50_Q2W2D5(260-489:505) Pseudouridine synthase n=39 Tax=Bacteria RepID=Q2W2D5_MAGSA   E=1e-25 s/c=0.52 id=38% cov=95%
--------PQDIALTVVYEDEDLIVIDKPAGMVvhPAPGNPDEtlvnallaHCGESLAGIG-GVKRPGIVHRIDKDTSGLLVAAKTDAAHRGLATQFAAHTLERAYWALVWGTPSPRQGEIEGNIGRNPNDRKKMAVVKSGGKPALTRYRVLKsFAGGAVSLVECRLATGRTHQIRVHMTTQGHPLVGDPVYGRirghkgvvlpPEVKTALiqfPRQALHAYLLGFSHPTKGYDVRFES----
>UniRef50_A9NGF1(64-284:297) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGF1_ACHLI  E=2e-25 s/c=0.53 id=39% cov=95%
---EETNPlkPKNIDLNIVYEDDDIMVINKPKGLVVHPSEtfsettlvsgLLHHTDTLST--HNDDPLRPGIlHRIDKDTSGLILVAKTNEAHKILAQDLKSHDIKREYIALVEGVLDHNKGVIDAP-IARHPKIRTKMAVVATGKPAITHFEVMRTFRDHTL-LHCKLETGRTHQIRVHLAYIKHPVTGDPLYGT-KAKILKDGQLLHAFRLEFVHPITKKVMMLEAP---
>UniRef50_A6NQQ9(84-288:300) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQQ9_9BACE  E=2e-25 s/c=0.57 id=41% cov=89%
-------------LDIVYQDQDVLVLNKAPGVAVHPG--PGHYSDTIGNFLMDYYRKQGiladfhpVHRLDRGTSGLLLVALHGHAQEVLKEQLHSPSFRRVYLAVCEGAPNPPSGVIDAPI-----GRLEGSVLARTVRPdgqrAVTHYRTLRTVNDR-ALVRLELETGRTHQIRVHMAHLGHPLTGDFLYGT-EDQSLIPRPALHAAELSFTHPITGKTMAFTAP---
>UniRef50_B7G8W7(1-235:235) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G8W7_PHATR  E=2e-25 s/c=0.50 id=41% cov=92%
-------------LQIVYHDSDIVVVNKPPDVLTVPG--IHSRSCVLDLVHDRFGEAVQdkahmiVHRLDMATSGIVLFGRTLNITKRMQAIFRDRLVLKTYQALLMGHFPIDKGTIDLPLQRDHEYPPFMRISTPTSeadavqavkdlqqhgwkklirkkpKPSQTSFRVLARSFRNGlpfTRMELVPVTGRTHQLRVHCAALGYPIVGDPTYDEyvPNEKAMC----LHAALLQCEHPTTGMPIVFEASPDF
>UniRef50_C6BSG2(89-319:549) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSG2_DESAD  E=2e-25 s/c=0.51 id=38% cov=96%
--------PEELPLEIIYNDGKIAVINKPAGLTTHPAP-SCPTGTLVHRMIHHFPEIRDmdewrpgiVHRLDKFTSGLITVALNEHDRLAMSTAFADREVNKAYLAIVHGVPKREFGEIDQPMGRHPVHKTKMAVVLKGGRDARSEYEVLwSDPAGRASLVKVKIYTGRTHQIRVHMAHIGHPLVGDQVYGSmphaiweqdqPQLAKLAERQMLHAYSLSFTHPDSEEELSFTQapPEDF
>UniRef50_A9BMW0(120-334:356) Pseudouridine synthase n=10 Tax=Comamonadaceae RepID=A9BMW0_DELAS   E=3e-25 s/c=0.54 id=40% cov=93%
--------PEDMALDVVYEDEHLLVVNKPAGLVVhpAPGNWTGTlLNGLLGRdpKAREVPRAGIVHRLDKDTSGLMVVARSRAAMDALVAMIAARDVSRQYLAlahKAWGPRKHRE--VDAPIGRDPRNRLRMAVvdlAQHAGKTARTDIDLL--AGNEEVSLVRCTLhTGRTHQIRVHMASLGHPLVADAVYGGKEAGGMA-RQALHAFRLAFTHPMTGQALVLRAP---
>UniRef50_C7RM94(100-320:375) Pseudouridine synthase n=11 Tax=Proteobacteria RepID=C7RM94_9PROT   E=3e-25 s/c=0.53 id=40% cov=94%
--------PEEIPLRIVFEDDTLIVLDKQAGLVVHPGS-GNWRGTLLNGLLHHAPQlarvprAGIVHRLDKDTTGLMVVAKTLEAQTDLVRQLQARSVKRCYQALVRGIVEGA-GIVDAP-IGRHPTVRTRMAVVSGGRPARTHYRVLErFVACTLIECALE--TGRTHQIRVHMTSIAHPLVGDPIYGGGASRvpqgAVFPRQALHACRLALVHPASGKAMLWRSgvPAD-
>UniRef50_D2BIX0(80-286:302) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=D2BIX0_DEHSV   E=5e-25 s/c=0.56 id=39% cov=90%
-------------LEIIFQDKDLLLINKPPGLTVHPA--PGHPDhTLINGVLALEPKMEDfddplrpgiVHRLDKDTSGLLLVAKNRETLANLSAQFKERTVRKYYLTLVKGELHPAEGFIEAPLGRDPQNRQKIAVV-SNGRHARTGYKVLRY-IQGYSLLEVKLETGRTHQIRVHFAAIGHPVAGDAIYGQKE--TWLKRQFLHAHRLSFTLPSNGQTVEFTSP---
>UniRef50_A9BFW4(76-304:319) Pseudouridine synthase n=8 Tax=Thermotogaceae RepID=A9BFW4_PETMO   E=5e-25 s/c=0.51 id=40% cov=98%
---ENILPENIP-LNILYEDEELIVINKPAGLIVHPtpsiktGTLVNalmHHVKDLDKTMQDPNRLGIVHRLDKETSGVLVVAKNAFSHHLLSKEFKERKTMKYYLAIVEGTLKEKEGEINLPLGRHPILRHKRAVVY-NGKEAITEYKTLKEFGDLATLVWIRLRTGRTHQIRVHFKYIGNPLIGDSLYGKNkiEKNLQIPvgRQMLHALKLGFYHPKTKEWMEFLAPLpdDF
>UniRef50_P70870(79-281:326) Ribosomal large subunit pseudouridine synthase D n=23 Tax=Borrelia RepID=RLUD_BORBU  E=5e-25 s/c=0.57 id=39% cov=87%
--------PSNIPIAIIYEDSNVIVLNKPQGILSHPGishwddtvvnFLLYHIKSLKINFNEEKIRPGIVHRLDKDTSGVLICAKNISTLRFLAQQFKDKRTNKVYIAIVKGNFNSFFGSIESFIDRDKHNRKKFSVSKDRGKKALTEYRLLlnfgEYSL-----LALKPKTGRTHQLRVHMKYLNFPILGDEVYGRVDGSLKKITLMLHSYKLEI-----------------
>UniRef50_D1PCC3(126-365:387) Pseudouridine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCC3_9BACT  E=6e-25 s/c=0.48 id=38% cov=96%
--------PEEIAINVVYEDDQLMVVNKEAGMVVHPGAGNFHGTLIqavawhlrdMPEFDANDPEVGLVHRIDKDTSGLLVVAKTPTAKNALGKQFFNKTTHRSYNALVWGNIVEDEGRIEGNIGRDPKNRLRMKVFdpdSGIGKTAVTHYKVLErFGYTTLVQCVLE--TGRTHQIRAHMKHIGHPLFMDETYGGTEilrgqrsssykafiqnCFKLCPRQALHAKTLGFVHPTTKQQMDFDSewPNDF
>UniRef50_A1URK8(80-317:336) Pseudouridine synthase n=2 Tax=Bartonella RepID=A1URK8_BARBK   E=7e-25 s/c=0.48 id=42% cov=92%
-------------LHILFEDDHIIVVNKPAGLVVHPGHGNWTGTLVNALI---YHCGDSlsgiggvrrpgiVHRLDKNTSGVIVVAKNDLAHKGLSAQFsdhgRTGVLDRRYHALIWGSPNRNIGVITASLGRARYDRTKQAVIHShniYARHAVTHFSVIEKYQTCADKIPFASLlecrleTGRTHQIRVHMAHIGHPLVGDTVYGNAfktksnrfdstikEAIDLFNRQALHAASLTFEHPAKGNIMSFSAP---
>UniRef50_C4FYR8(94-313:326) Pseudouridine synthase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYR8_ABIDE  E=8e-25 s/c=0.52 id=36% cov=95%
--------PENIPLDILYEDEDVILINKPKGMVVHPaaghytgtlvNALMYHCRDNLSGINGEL-RPGIVHRIDMDTTGVIIACKNDVSHRIIAEQLKEHSIKRKYQAIVYGVFKDEEGRIEGSIGRSKTDRKKMAVIPD-GKPAVTHYRVIrNYTSpngNNFAHIECELETGRTHQIRVHMTSIGHPLLGDEIYGAAKNPFKLDGQALHAEMLGFVHPRTGEYMEFHAP---
>UniRef50_D1Y3Y9(118-326:345) Pseudouridine synthase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3Y9_9BACT  E=8e-25 s/c=0.55 id=40% cov=90%
---------------VVYEDDDVIVVNKPAGVVVHPG-AGRPDGTLVNGLMFRYPEIGRigdsvrpgiVHRLDVGTSGLMVVARSDAAFRGLTEAFQAHEVLKEYLGLGVGALKAPEGTVDAPIGRDPRNRLKMCVSWD-GRDAVTDYKVLwTRARCNLIRVRLH--TGRTHQIRVHMRALGCSLDGDTLYGpkDPAQHILKDRVFLHSWRLGFRHPVSGERLEFRAP---
>UniRef50_A3EQJ0(90-317:339) Pseudouridine synthase n=1 Tax=Leptospirillum rubarum RepID=A3EQJ0_9BACT  E=1e-24 s/c=0.50 id=38% cov=95%
--------PENIRLEILYEDEDLIVISKPPGLVVHPapghssGTLvngllfhfqsqgdEQKKGEPEEEEEAERPlRAGLVHRLDQDTSGVMVVGKTESVVLDLMNQFKDRSVSKKYLALVKGILPKKRGEINAPIGRSTHDR-KKFTVRQDGKPSVTRYRVLETYHENYSLLEVTLLTGRTHQIRVHFRYLGFPLLGDAVYGSKGTENKNfPRQMLHAWKLSFQHPSSNSKMEFEAP---
>UniRef50_B5YAZ5(7-217:226) Pseudouridine synthase n=2 Tax=Dictyoglomus RepID=B5YAZ5_DICT6   E=1e-24 s/c=0.55 id=37% cov=92%
-------------LEVIYEDNHLLVVNKPAGIL-VQGDIT--KSTTLLEISKAYIKEKYkkpgnvflaiVHRLDKPVSGVVIFARNSKSAGRLSEAFRERKVEKEYIALCKGIFKVKKGTISESLLWVEKERKARVSQDDKSKNAITHYEVLE-EFKNLSLVRLIPETGRKHQLRAHLSYIGHPILGDEKYGG--GRIFKDRIFLHCKKMAVPHPVRKDIMEFEAKIpDF
>UniRef50_P59838(81-306:321) Ribosomal large subunit pseudouridine synthase D n=3 Tax=Gammaproteobacteria RepID=RLUD_BLOFL  E=2e-24 s/c=0.50 id=39% cov=94%
--------PQNIPLNIIYEDNDILVINKASNMVVHPG-IGHYQGTVLNALLYRYPsilkiskQAGIVQRLDKDTTGLMIIAKTVSAYDNLLRSFKLRKVVKEYDAIVYGKFTSNAGVVNQPMRRHFAKRTFMSVHY-TGKSAVTYYSVVeEFKAHSRVRINLK--TGRTHQIRVHMAYINHPLVGDQKYKGNfsvfDIKKMSDELnnylldfnrqALHACTLQLLHPITQVQMKWNAP---
>UniRef50_A6GP31(106-317:335) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GP31_9BURK  E=2e-24 s/c=0.54 id=37% cov=92%
---------------ILFEDEHLLVVNKPSGMAVHGGSGSSFGLIECIRALRaeTHQDLELVHRIDRETSGILIISKKRSALRKLQEQLRARSWKKYYKTLVLGHWPEALRQVDLPLLKTQSSEKEARVFVdESGDKACTKFKVIQcYKSSYSSFTLIQAqiLTGRTHQIRVHTSANKFPIAGDDRYGNFEmnkqlARQGLKRMFLHAARLQLVHPATNETIVLEAP---
>UniRef50_C0Z877(85-296:310) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z877_BREBN  E=2e-24 s/c=0.54 id=37% cov=91%
-----------PSIDILYEDDHLLIANKPAGMMVHP--IKQETDTlvhalaAVLAARGEQTSVHPVHRLDKDTSGAILVAKSSYGHQLADRLLREGGIHREYLAVASGVLSEGAGTIDAPIGRD-ARHPTKRRVVESGDPAITHYEVQQTSEEMTlARVWLE--TGRTHQIRVHFAHIGHPLAGDTMYGG--ARGLLRRQALHASKLSFLHPLLEKEIVVEAP---
>UniRef50_A5EX53(86-302:322) Pseudouridine synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EX53_DICNV  E=3e-24 s/c=0.53 id=40% cov=91%
-------------LNILYADDDIIVINKPAGLVVHPA-VGNHDNTLLNALLYHFPQTKHlprsgiVHRLDKDTSGAMVIAHSARAHTDLVRQLQNRSMGRIYLALVYGYITAGDT-IDLPIGRHAKDRLKMAVRPD-GKPAITHYRIEErWQTLTLLRVQLE--TGRTHQIRVHLSHHRHPLVGDKLYGArpflassltelqRQALAEFPRQALHAVELHLHHPATNEIMRFTAP---
>UniRef50_A7HV45(226-460:482) Pseudouridine synthase n=56 Tax=Alphaproteobacteria RepID=A7HV45_PARL1  E=3e-24 s/c=0.49 id=43% cov=93%
-------------LEIVYEDADLIVVMKPAGLVVhpAPGNpdmtlvnaLVAHCGETLSGIGGEK-RPGIVHRLDKETSGLMVVAKTDRAHQGLSAQFaahgRDGKLTRAYTALTWGVPQTRKGTVDANIARSSHNRSKMATVRDrgeetGGRIAITHYTVkTDYADGLVAEVECRLETGRTHQIRVHMTALGHPLLGDATYGtgmksrksklSPEAQAALERLnrqALHAHHLGFEHPVAGEKMSFDAP---
>UniRef50_C6CWL6(84-290:316) Pseudouridine synthase n=2 Tax=Paenibacillus RepID=C6CWL6_PAESJ   E=4e-24 s/c=0.55 id=37% cov=89%
--------PQDLPLSIVFEDDYLLVVNKPAGIIVHPTK--GHYTNTLAngivhhwQVRGERVRFRPVHRLDEDTSGLVVIAKNPYIHQQLSEQLQAGTIMKIYCAYVYGTPSPADGTVGAPIDRN-PEDPHVRIVTPEGYPSVTHYKTAAvFGGGQASKVRLKLETGRTHQIRVHMKHIGCPLIGDGMYGlqtgkVDEWETAAGRQALHAETLGLTHP--------------
>UniRef50_Q2LWV4(80-306:333) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV4_SYNAS  E=4e-24 s/c=0.50 id=39% cov=95%
--------PQDIPLSILYEDHDLLVLDKPAGLVVHPaaGHVSGTLVNALLFHCRDLAGIGGvmrpgiVHRLDKDTSGLLVVAKTDAAHQGLALQFKKHQVGKTYQALVYGDPREKTGQIDLPVGRHPVERKKMSTKSRRGKEAATRWRIAERFGVATL-LNVDIVTGRTHQIRVHLAAIGHPVVGDAVYGSSK-RATTltdpavkgrlkemSRQALHAARLSFTHPVTHKILEFHAP---
>UniRef50_A6FJ39(29-229:238) Pseudouridine synthase n=1 Tax=Moritella sp. PE36 RepID=A6FJ39_9GAMM  E=5e-24 s/c=0.56 id=41% cov=88%
-------------LEILYSDNDLVVINKPAGLLSVAS-ANENKQHALAILRKQLSHAKNsvalwpVHRLDRDTSGVLMFATS----REMRDAVNEgwSGAEKTYLAVVEGSPKPSQGRIDQPLRMD-PEKYQMIVGpHSEAKNAVTHFKTLRTVKELTL-LEVKLETGRQHQIRVHMAWLGHSVIGDPRYGTD-----GPRMGLHALSLSITRPNTGKRLTFEAPA--
>UniRef50_C9M5C8(49-243:276) Pseudouridine synthase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C8_9BACT  E=6e-24 s/c=0.58 id=44% cov=84%
-------------LDVLYRSDSVLVINKPAGLLSQPD--TKGEDSVATRAL-GYASdpafgAQLVHRLDRNTSGVMILALDGQALRSLMVCFKERTANKTYLALVSGQLPPS-GQIDAPLLKD-PDKKLVRVA-SNGERAVTRFR--RLATDGQFSLAeVEILTGRTHQIRVHMNHIGHPILGDakygDFSAKPQVRRLGIRRpMLHATCLVVNSP--------------
>UniRef50_A8ZXZ8(77-305:329) Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXZ8_DESOH  E=6e-24 s/c=0.49 id=40% cov=94%
--------PEPAPLPLLFEDAFLLVVNKPPGLVVHPApgheggtlvnRLLHHFPAIGTVGEPDRPGI--VHRLDRNTSGALVVAKTAAAHQALSDMFKSRQVRKTYLALVYGQMKSTGGVVTLPIGRHSLERKKMSVSSPQARPAETRWKVRKAFVDASL-LELEIHTGRTHQIRVHCTALQRPVVGDPTYpckwtrkrqhfssrASFELLNAAGRQMLHAWRLEFDHPVTGAPMCFTAP---
>UniRef50_Q30SZ1(2-224:241) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q30SZ1_SULDN   E=9e-24 s/c=0.50 id=38% cov=92%
-------------LEILYQDEHLVAINKPSGLLVHRSPIDRHETEFAIQTLRNqlgrfvYP----IHRLDKPTSGVLLFALDKESAKIMGEKFMAHEAKKSYIAVVRGY-TLQSGEIDYALSIKFdkiadkdsssDKEPQEALThYKRLATVELDFEVGKYDKTRYSLVKLNPLTGRKHQLRRHMKHISHHILGDTKYGRGEHNKLirqefgCHRMLLHAIALEISHPYTKELLYIKAPLD-
>UniRef50_A4RT55(65-332:332) Predicted protein (Fragment) n=3 Tax=Chlorophyta RepID=A4RT55_OSTLU   E=1e-23 s/c=0.42 id=42% cov=96%
----------EPWvkLDIVHEDESVLVVNKAAGMVTHPSAGHESGTLVNAVLGHcDLPelvvptgnQALSdddeddedavdedegardgmirpgiVHRLDKGTSGVMVVAKDASAHNSLCEQFAARVVRRKYVAILSGVPSPSKGRIEAPIGRDPRDRLRMAVTQGGGRFAASNYEVIATLANGNASLVeWRLETGRTHQIRVHAKHIGHPILGDDTYGGgggaavsalsrygvfdvKEAKALMStidRPMLHARTLGFTHPQSGEALDFSRdpPEDF
>UniRef50_B9MS57(72-272:293) Pseudouridine synthase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MS57_ANATD  E=1e-23 s/c=0.56 id=36% cov=86%
--------PVEGSIDILYEDNFFLFVNKPSGLPSHPSK-GHYFDTIANYVEY-YLNSKNltshiINRLDKDTSGIVVFAKNSYFHSIVSYEFEKRRVDKTYIAIVHGILTKKSGLIEKPI--KRSDDGIKREIHQDGSFASTYYEVID-SFENFSVLKLKPITGRTHQLRVHLSSIGHPIVGDYIYG--EEKTQNTPLLLHAYSISFN----------------
>UniRef50_Q9JVB6(100-320:374) Ribosomal large subunit pseudouridine synthase D n=39 Tax=Proteobacteria RepID=RLUD_NEIMA  E=1e-23 s/c=0.51 id=40% cov=94%
--------PEPMALDIVYEDDTVIVVNKPAGLVVHPaagnwtGTLLNGLLAHCPELSQ-IPRAGIVHRLDKETSGLMVVAKTLPAQNSLVWQLQERTVKRIYRAVANG-IVPFDGKIETQIGRDPHNRLKMAVVKFGGKPAVTHVKVLErYLAHSYIECSLE--TGRTHQIRVHMREANHPLAGDPVYGNPRhpcgdtvkeaVKSLGARQALHAYRLSFTHPESGETVSFEAP---
>UniRef50_C6WV38(90-305:368) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=C6WV38_METML   E=1e-23 s/c=0.51 id=43% cov=89%
-------------LDIVYEDDHILVVNKPAGMVVHPA--AGNWDGTLLNAllfhapqLHDVPRAGIVHRLDKETSGLLVVAKTLNAQTHLVRQLQARTVKREYRAIVWGQLW-RNGVVDQPLGRDPRSRTKMAIN-RMGKPAITRYEILErFSVQTYLRCNLE--TGRTHQIRVHMQHLKAPLVGDPVYGFRGivpIRAMTQTLrdavsqfhrqALHAIKLGLVHPATNEFMEWQ-----
>UniRef50_Q1Q689(86-314:335) Similar to ribosomal large subunit pseudouridine synthase D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q689_9BACT  E=2e-23 s/c=0.48 id=36% cov=93%
--------PEDIPLNIIYEDDYLMLINKPYDMVVHPA--GGHPSGTLVNAVTFYCQNLSqingplkagiVHRLDRDTSGVMLVIKSDAVHSHIAMQFEKRLVKKEYFAVVEGEVAFDSNEINMPIGRHRVDRQKMAVRRDTGKNATSVYEVIERFRGYTL-VKIMPKTGRTHQIRVHMQAIGHPVVADEMYSkynacfrsdllgkerAPDEGSIIERQALHAHRIEFFHPILNKQMAFQ-----
>UniRef50_A9IQ66(81-318:334) Pseudouridine synthase n=5 Tax=Bacteria RepID=A9IQ66_BART1   E=3e-23 s/c=0.46 id=40% cov=93%
-------------LDILYEDDHVIVINKPAGLVVHPGNgnwtgtlvnaLIYHCGNSLSGIG-GVKRPGVVHRLDKNTSGVMVVAKNDLAHKSLSAQFsdhgRTCALDRRYHALIWGTPHRNVWTIDASLGRSPHNRTKQAVVHKQtphARHAVTHFSLLEkygTHADSTSFASLLECrleTGRTHQIRVHMAHIGHPLIGDTVYGNAfktKSNTLNPTLknaidqfnrhALHAASLTFEHPSSGKVISFSAP---
>UniRef50_Q28US1(98-325:354) Pseudouridine synthase n=43 Tax=Rhodobacterales RepID=Q28US1_JANSC   E=4e-23 s/c=0.48 id=39% cov=91%
---------------VIYRDDHIIAINKPAGLPTQGGTGQSrHVDGLAEALKfglEDKPRL--VHRLDKDTSGVLLMARTRMGAKALTDAFRLRSTRKIYWAAVAGSPLPRMGTIKLGLV-KAPGHgrggenekmravPVDEIAQVDGaKRAETDYAVMSNLGGRVCWCALVPITGRTHQLRAHMAEIGHPIIGDGKYGGSGQENLGDgwgaqlggeisrKLHLHARSLSFRHPMTGAQVNLVAP---
>UniRef50_D1RB31(82-297:319) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB31_9CHLA  E=4e-23 s/c=0.51 id=39% cov=93%
--------PEQIPLNILYEDEHLLIINKPVGMVVhpAPGNwtgtfvnaLLYHCGYSLSDASVDSIRPGIVHRLDKETSGVLVAAKTLSVQQKLMELFAARQVYKEYWAICLGNPGNCE--LNWP-IGRHPIHRKQMTVREDGKEALTFCETLEVGNEiCLAKLILS--TGRTHQIRVHLKHKGHPILGDSIYGSKQVnmRYRAERQMLHARKLAFIHPITQQKIEVEAP---
>UniRef50_C7GZW0(99-289:318) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZW0_9FIRM  E=5e-23 s/c=0.58 id=36% cov=84%
----------------VYEDEHLLVIDKPAGIVVHPTHGYEENTIAhalihyMDTVGEEF-KIRFINRLDMDTTGLLMIAKNQFIQNAVVSEMKRGNVEKRYLAVVHGLPCNREGIIDAP-IKAVEGEPRRQVM-EGGKPSITEYKVVGVSDElNVSFLDVRLHTGRTHQIRVHLKHIGCPILGDEFYGGKES---ADRQLLHSRYLRFTHPV-------------
>UniRef50_Q38VN9(78-290:306) Pseudouridine synthase n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VN9_LACSS  E=5e-23 s/c=0.51 id=41% cov=89%
-------------LKIAYEDDHFLIVDKPAFVASLPA--PNHPNNTMANFVKQYlidEQAESlavhvVTRLDRDTSGLMMFTKHGFAHSLLDRQLQSKELQKTYIAIASGDMRE-----DLPQHA-WIDRPikrseefyMRRVVGEGGKRSLTEYWQAAH-GDGATLVKLKLLTGRTHQIRVHFASLGHSLIGDNLYG--ESNDLLPRQALHCRQLTFYHPFEERTITVKSpvPADF
>UniRef50_D1N7N8(85-299:323) Pseudouridine synthase, RluA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7N8_9BACT  E=5e-23 s/c=0.51 id=43% cov=91%
---------------ILYEDDVMLVIDKPAGVVVHPA-AGNPTGTVVNALLGRYPQlAEQlacttsrpgiVHRLDKDTSGCLAVAKTANAQFKLSTAFAGRETRKTYLAITRGVPIRRSGELS-TLIGRHPvSRQKMAVVERNGKLAITRYR-VEYTGmlDGVEIGVLavRILTGRTHQIRVHLASLGVPVLGDAVYGGARtAVAGVERQLLHAWKLCVPHPATGTPMEFTAP---
>UniRef50_P74346(98-310:327) Uncharacterized RNA pseudouridine synthase slr1629 n=19 Tax=Bacteria RepID=Y1629_SYNY3  E=6e-23 s/c=0.51 id=36% cov=92%
-------------LDILYEDEQLIIINKPAGLVVHPG--PGHPDgTVVNALLAHCPDLAGiggvqrpgiVHRLDKDTTGAMVVAKTELALHNLQVQLKEKTARRLYWGIVYGSPKEIQGTVNLPVGRHPGDRQKMGIvpVEKGGREAVTHWRLLERIG-NHSWLEFQLETGRTHQIRVHSKQMGHPLVGDNLYTSPgSVNVNLPGQALHAHQLSLIHPVSGEIITAIAP---
>UniRef50_D2QJH0(89-293:308) Pseudouridine synthase, RluA family n=3 Tax=Bacteria RepID=D2QJH0_9SPHI  E=7e-23 s/c=0.53 id=37% cov=89%
-------------LTILYEDQFLIVINKQAGLLSMATNKE--RDRTAYGILSEYTKKENpknkifiIHRLDRETSGVMMFAKSEKVQRLMQESWNATTKERTYVALVEGIPEPPQG-----TITSYLRESKALIVYSSQNPDTGQLSITNYTVTKTgngyALLELELETGRKNQIRVHMQDIGHPVAGDEKYGA-ESDPIG-RLGLHAEVLAFEHPITGVPMRFDAP---
>UniRef50_UPI0001C42CC7(105-308:322) hypothetical protein BpOF4_01845 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42CC7  E=8e-23 s/c=0.53 id=37% cov=89%
-------------LDIHYEDDHLLVINKPQGMPTIPSR--EHPSRTLANAVMGYYEShhipftfHAVNRLDRDTSGLLVVAKHGLAHDQLSKGQRAGKLKRYYLALAEGFVQPREGTIHAP-IKRRPSSIIERMVAADGQEAITHYKVIN---DNQAysEVEINLETGRTHQIRVHFAHLGHPLLGDDLYGG--SIELLARQALHCQRVELIHPFTGKHLHFSAP---
>UniRef50_A4J1I1(75-286:303) Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1I1_DESRM  E=8e-23 s/c=0.51 id=37% cov=94%
-----YLPPEPLDLSIISEDEDIALVNKQPGMCVHPtlaypsGTLAN--GLVYHWLENNpAPTFHAVNRIDRNTSGLVLVAKNSYSAQKLFLQRKRKQLARSYVALVHGKIVQRNGYIDLPLeKCEGKTTKRQ--ISSTGQQALTRFEVLQYITDCTL-IRLMPETGRTHQIRVHLSHLGHPLVGDTLYGG--SIAQIGRHCLHADKISFLHPRTGHPMSFQIP---
>UniRef50_B7FU02(1-240:240) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU02_PHATR  E=8e-23 s/c=0.45 id=44% cov=94%
-------------LHILYCDEHICVVNKPSGILSVPGpRRNPSIANLVYEILNppiDIDQM-VVHRIDMDTSGVLVFALTELALRQLHDDFRSRRVKKTYEALLAGHFRKATQVeIDVALERDPYHPPFMRRYWEPQRSATYSrqfsqiYQPSAQAHLPVSRVHMSPHTGRTHQLRVHAAALGYPIIGDDIYGfegegdcgvnSTILDQLIPNRMslhqqlqelqlplcLHAKQLCIFHPFSGAPMIFECEAPF
>UniRef50_B8FT16(107-317:334) Pseudouridine synthase n=70 Tax=Bacteria RepID=B8FT16_DESHD   E=9e-23 s/c=0.51 id=36% cov=93%
-------------LEILYEDEDVLVVNKSQGMVVhpAPGAWTKTLVNALLYHCRNLSGINGvlrpgiVHRIDKDTSGLLVVAKNDLAHQGLAEQIKAHSMARRYLAIVHGVVFEPSGTVEAPIGRDPADRKKMAVVFQNAKEAVTHYEVLERFRDFTL-LEARLETGRTHQIRVHMAYLKHPVLGDPLYGPRKNPFGLQGQMLHAQLLGFQHPRSGEYMEFSAPA--
>UniRef50_A0LPH5(75-309:344) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH5_SYNFM  E=9e-23 s/c=0.46 id=37% cov=95%
-----LQPRPMP-LEILFEDDDVLVLNKAPGVIVHPGAGHEEGTLVhgllahCSRLaSRGAPRRPGiVHRLDRGTSGALMVAKSERAYLELIRQFKHHEVGKEYLALVYGTMAGASGEIRTGMGRHPVDRKRMAVLEKGGREAVSQWKVaVAWGEVSLLRVVIK--TGRTHQIRVHLSHMQHPVVGDETYGGGKRKARAvksdvlrellmevDRQMLHAVGLAFRHPVSGADLSFTAP---
>UniRef50_D2R4N0(89-296:313) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4N0_9PLAN  E=1e-22 s/c=0.52 id=37% cov=91%
---------------IVYEDRHLIVVEKPAALLTVPtpkndrGTLLERVANYVKIVSRG-KGAFQVHRLDRGVSGLLIFGKTTELAQMLRDQFAMHKPEREYVAIVRGKLDKPEGMIESFLATDRDLNRYSTDDESIGQHAVTHYRVIeELAGASVVQVWLE--TGRRNQIRVHFAEAGHPLIGDQRYRADEAadtRWTHARIALHARLLGLSHPMTGEPLRFESP---
>UniRef50_Q0BYW5(21-230:244) Pseudouridine synthase family protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYW5_HYPNA  E=1e-22 s/c=0.51 id=40% cov=91%
----------------IHEDAAILGFNKPPGMASQGGSSvgQSLDDLLWAFAKSNGKRPRLVHRLDQGTSGVMLTARTQPAAAFLSAAFAGRDAQKTYLALVKGKLPPAEhGVIDASLVkVEEGGRPRMilaKPSRKGAQPARTGWAVLARNEDH-ALMQLTPETGRMHQIRVHLMSLGCPILGDGLYG--EGQATAPRVMLHAARLEVPHP-EGGTLTLEAPVpeDF
>UniRef50_C1TRW2(79-283:305) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRW2_9BACT  E=1e-22 s/c=0.53 id=42% cov=81%
-------------LVTVYRDESLWVVSKPAGLLSQPDK--KGGDSVVTRafLPGSSFQPQAVNRLDRNTSGIMVLALTGESLRDLSSRWRDGEMEKVYLALVVGDL-PEEGSIDAPLSKDGSS---NKVFVDSkGQSSLTLYRRLA-SGGGLSLCLVTLITGRSHQIRVHMSHIGHPVLGDVKYGDRALNGVkgAKRPMLHA----------------------
>UniRef50_C8QZ10(96-306:324) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZ10_9DELT  E=2e-22 s/c=0.51 id=39% cov=91%
----------------LYEDEDILVLVKPPGLVVHPA--DGHRQGTLVHGLLHHCRNLSgisgqlrpgiVHRLDKDTSGCLVVAKNDLAHHNLVQQFKGREVEKTYQALLRGILAEDTGQVVLPIGRHPVHRKKMAVRREGGREAVTHWRVRQRFSAGYTLVELLLETGRTHQIRVHMAALGHPLAGDRLYGRNPEKDMpygIDRQWLHAWRLAFNHPRSGRRLTFTAP---
>UniRef50_Q83G23(76-283:303) Pseudouridine synthase n=2 Tax=Tropheryma whipplei RepID=Q83G23_TROWT  E=2e-22 s/c=0.51 id=36% cov=92%
-------------LRVIYSDDDLFVIDKPAGVAahASPGWCGPTVTGCLSGLLAACgPQDRQgiVHRLDANTSGLMVLAKSDLAYHNLKAAFRDRAIHKRYKALVQGYPDPSSGVINAPIGRDLKHRDRFCIDY-SGRDAVTQYSTEEVYPGFTL-LSVAPKTGRTHQIRVHFSALRHPLVGDvKYGADPvfSQKVNLKRQWLHAYHLSFTHPVSGVFVEFES----
>UniRef50_A0LBW6(13-211:224) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBW6_MAGSM  E=2e-22 s/c=0.54 id=40% cov=89%
---------------ILHMDADLLIFNKPNRMpiYRGPGGGETLADHLpQLCFERGKPPA-AVHRLDSATSGCLVLGRHKGMRRSLSNLFAQGGVEKLYWAVVQGRPLMDQGLIELPLQdVGWPGRPRVKV-RMGGKWGRTLFQVMGYGQNETL-LALMPQTGRTHQLRVHCAAMGCPIVGDPLYGG--AACDGPPMHLHARRI-LLHGAIQQSFTAPAP---
>UniRef50_A9B3Z2(5-206:560) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3Z2_HERA2  E=3e-22 s/c=0.53 id=38% cov=89%
---------------ILYRDEQILVINKPTGVATHAPQgdlaLTDVERALRAQLQLEYL---AIHqRLDRDTSGVMLFALDPAANANLATAFAEHTIEKTYQALVYGVPIQTQGVIDAALAPAGDGMIQVASAHDrRAQSAITHYRVLVSSPDQRFSLLeLQPKTGRTHQLRVHCECLGHPIVGDPLYDVARA---APRLMLHASELRFTHPLTQQPLHIQAP---
>UniRef50_Q312A0(114-347:578) Pseudouridine synthase, RluD n=6 Tax=Bacteria RepID=Q312A0_DESDG   E=3e-22 s/c=0.46 id=36% cov=96%
--------PEEGELEVLYRDAHMLVINKPAGLTVHPAP-SCPEGTLVHRLLHHFPELEAqegfrpgiVHRIDKDTSGLLLIALTEKARLALSDAFAGRRIHKEYLALVKGIPEGDSGEIDAP-VGRHPTHKTRMAVVRGGREALSTWRVLladPHGGGGTGwtLVAVRIHTGRTHQIRVHMQHTGHPLWGDALYGgmpgreelqtTPALAQTATRQMLHAWKISFDHPVTGAPMQFTLppPADF
>UniRef50_B5YKV0(77-295:315) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV0_THEYD  E=3e-22 s/c=0.49 id=34% cov=93%
--------PQNIPIQVIYKDDYLIVLSKPAGMVVYP--CAGHPDgTLMNALAYHVKKLANvgapfrpgiVHRLDKDTSGVMVVALDDETYYKLVEAFKKREIKKEYLALVYGQLR-GSGKITTPVGRAIYDRKKMSIKSKKAKEAITEWEVIK-NFKNYTFLKVKILTGRTHQIRVHFSSIGHPVIGDKTYGRKtyieigNKKIPVSRQMLHAHKIELIHPITEKLLQFEA----
>UniRef50_B5JHH9(82-312:324) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH9_9BACT  E=3e-22 s/c=0.46 id=38% cov=96%
--------PKIPDAAIVYFDEHIVVVNKAAGLMTVP-HPESDETETLDRLVNDYlrirdPDAKTnraslgvVHRIDKDTSGLVVFARTFLAKRALSEQFRAHSIERRYLAIVHGELKAQSIRTHLvretgdGLRGSAPKGATNSEGEELGRLAITHVDVVERLAGATL-VSCRIETGRTHQIRIHLSEIGHPIVGEKVYIRGFEGELIPanRAMLHAAELGFIHPGSGEAVSWQeeASKDF
>UniRef50_Q8ZFU1(95-303:320) Ribosomal large subunit pseudouridine synthase C n=102 Tax=Gammaproteobacteria RepID=RLUC_YERPE  E=3e-22 s/c=0.51 id=37% cov=92%
---------------ILFEDDYLLVLNKPSGTAVHGG--SGLSFGVIEGLRALRPEArflELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKSMQKDYLALVRGQWQSHCKAIQAPLLKNIMQSGERVVKVSSeGKPSETRFK-IEERFEHATLVKASPVTGRTHQIRVHALHAGHPIAFDDRYGYREFDQQLQgtglhRLFLHAAALRFEHPNTGETMRIEAPLD-
>UniRef50_D1Y726(75-295:315) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y726_9BACT  E=3e-22 s/c=0.48 id=45% cov=89%
-------------LDVIYSDRCVMVVNKPAGLLSQPDVKGE--DSVVTRalgyaVDPEFP-PQLVHRLDRNTSGVMALALDGPTTRALMECFKARRADKRYWAIVIGE-LPERGRIDVPLLKD---ADKKLVRVDpKGERAVTEYKrLTSSGAFSLAEVHL--LTGRTHQIRVHMNHVGHPLLGDvkygDFGSKGQLRSLGvKRPMLHARSLTLNGlPAFLSHLegkTFRAPA--
>UniRef50_Q47417(116-338:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=3e-22 s/c=0.48 id=39% cov=94%
-------------LEIIYQDEHLVAVNKPSGWLVHRSWLDRKEKVVVMQTVRDQigQHVYTVHRLDRPTSGVLLLALSSEVARALSQQFESHQMQKTYHAVVRGY-VLDDGVIDYALteeldkIADKftnPDKAPQPAVTHYRSLAQAEMPVAigRYPTARYSLMELKPQTGRKHQLRRHMSHIHHPIIGDtahgdlRHNRGMESHFSCGRLMLHASELQLNHPVSGQPLTLQARWD-
>UniRef50_C7LR44(14-220:243) Pseudouridine synthase n=6 Tax=Bacteria RepID=C7LR44_DESBD   E=3e-22 s/c=0.52 id=38% cov=91%
-----------PGLVIIYEDRDIIVVNKPAGMLTMATETEKTRtayyaltDYVRKGNAKSRYRIFIVHRLDRETSGIVLFAKTEVAKRTLQDQW--EDTTKIYAAVVHGQMGKASGMLSSHLVESGVHKVYATRDAALGKLARTAWTVLkERGGYSLLDVTL--LTGRKHQIRVQMADAGHPIAGDKKYGVKG--DTFSRLALHARSITFAHPFSGRSMTLDAP---
>UniRef50_O31613(66-269:283) Uncharacterized RNA pseudouridine synthase yjbO n=53 Tax=Bacillaceae RepID=YJBO_BACSU  E=4e-22 s/c=0.52 id=38% cov=90%
-------------LDILYEDEHVLVINKQPYVSSIPSR--EHPSGSIANGIIDHYQTTGVRatvhlvtRLDRDTSGIMLVAKHRFAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAP-IGRHPDSIIERTVTPDGQKAVTHF-YVTCANDDMTSVALQLETGRTHQIRVHMSYLGHPLCGDTLYGG--TRQEIGRQALHSEHLSFIHPLTQENMRFHAP---
>UniRef50_Q5QZ45(94-302:315) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q5QZ45_IDILO  E=4e-22 s/c=0.51 id=36% cov=93%
---------------ILYEDDALMLINKPSGVAVHGGSgLQFGLIEGLRALRPKEKSLELVHRIDRDTSGLLLVAKKRSVLRSLHEQLRNKEMNKQYLALVRGQWQKRVRSVEAPLKKNTLKSGERIVRVDAeGKASLTRFRIQQRYKEGTL-VEASPVTGRTHQIRVHALHAGHPIakdpkYGDTDFDNTMSRLGLNRLFLHAWQLRFLHPVTGKEVAFEAPLD-
>UniRef50_D1RB93(70-270:283) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB93_9CHLA  E=4e-22 s/c=0.53 id=37% cov=90%
---------------ILYEDAHLVVIEKPAGLLSVATNFDKAKTAHAFLKERYRPrKVYVVHRLDQDTSGVMLFALTGEAFFGLKALFADHDIDREYTAVVHGKMTQQEGTWQSYLYED-----KAYVVHSTQDPDKGELAITHFktveARTHFSLLNLKLETGKKNQIRVHCEDHGFPIVGDKKYGGEGESHITKRLCLHAHHLGFVHPIYKKEMSFDSP---
>UniRef50_B8FLB4(79-304:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=B8FLB4_DESAA   E=4e-22 s/c=0.47 id=41% cov=92%
---------QDMDLAILYEDRDIVAVNKPPGMVVhpAPGHssntlvnalLAHCKDlSGIGGVQR----PGIVHRLDKETSGVILAAKNDAAHAGLSEQLAQRRVEKFYLALAHGVIKEDTGVIDLPLARHPSDRKRMHVSTpAKGREALSLWTVKERFLDATyVKVQIK--TGRTHQIRVHLAALHHPVIGDTVYGGRKKRGRLPasvlgkapppeRQMLHAHIVSFTHPVTGEKLTLTAP---
>UniRef50_C6VIZ5(74-286:300) Pseudouridine synthase n=3 Tax=Lactobacillus plantarum RepID=C6VIZ5_LACPJ  E=5e-22 s/c=0.50 id=37% cov=96%
----NYIAAATAPATILYQNSDLLVVDKPAGVKShpnQPGETGSILNDLAATLQPTQQVPYMVHRLDQMTSGAMLVALNPVVVPILDRLISDKQIRRTYYAWVRGHFATPTGHFTAPIGHDATDKRKRWVNTADAQPALTDYEVCATTAHQSL-VKLTLHTGRTHQLRVHLAASDHPIIGDPLYDS-QAES-APRLMLHAQLLDLQLPFSTTRVTVPAP---
>UniRef50_C9RQF0(73-305:424) Pseudouridine synthase, RluA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQF0_FIBSS  E=5e-22 s/c=0.45 id=37% cov=95%
--------PEDIPLNIVYEDDDIVVINKPRNLVVHPGN-GVSKGTLAAALLYHFKENLStvngplrpgiVHRLDKDTPGLMVVAKNDAAHRHLAHQLETRTLHRTYNALVWGCPRDLEGTIDAPIGRNPKNRLKMAVV-KGGKESRTHYVAKQFFAIATL-LELQLESGRTHQIRVHSRYTGHPVVGDPLYdgrdeslnrvpplmkpVAEKVLEIAPAQLLQAVKIELIHPRTNKKLTFKVPME-
>UniRef50_O50310(72-306:327) Uncharacterized RNA pseudouridine synthase Cpar_0723 n=13 Tax=Chlorobiaceae RepID=Y723_CHLP8  E=8e-22 s/c=0.45 id=39% cov=93%
--------PEDIPITILYEDDDLMVIDKEAGMVVHPafgnwtGTL---ANAILHHLGKDADELDKtemrpgiVHRLDKDTSGLIIIAKNPTALHKLARQFANRQVEKVYKAIVWGVPKAESGTIKTNIGRSHKNRKvMANFPYEgaEGKHAITDYQVVEdLGYFSLMDVTLH--TGRTHQIRVHLQHLGHSILGDETYGGATPRTlpfsksepftrnlleLMSRQALHAQTLRFRQPTTGEPLSFSAP---
>UniRef50_A6G930(98-337:356) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G930_9DELT  E=9e-22 s/c=0.44 id=39% cov=95%
--------PEEPAVIldygVVHEDPDVLVLDKPGNLPVHPtARYHRHTLTALMR-RRLGPKHgwEMAHRIDRETSGVIIFGRRKASGPKIKGSFFRREVHKEYLAIVLGRLELPEGprLIDMPLGSAVGSKIMIKMgprpVDEGGLPAQTTIEVLAHGEHRGQPITLVrclPRTGRTHQIRVHLAEIGHPILGDKLYAAEedeflavvedgepvaelEARLGLWRQALHARALSLPHPTTGDGVRYVAP---
>UniRef50_B1I3F8(76-290:309) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1I3F8_DESAP   E=9e-22 s/c=0.49 id=35% cov=95%
--------PEAIPLEVCFEDPDVLVVNKPRGLVVHPavGHYSGTLVNALLHHCRDLSGINGilrpgiVHRLDRDTSGLLMVAKNDAAHLALAGQLKDRAVLRRYTALVHGRPRRETGTVDAPIGRHPRDRQRMAVTPRSGRAARTHYRVVRR-FDKFSLLELTLDTGRTHQIRVHMAHVGHPLVGDLKYGHARPELGLEGQFLHAGTLGFRHPRTGEVLVFEAP---
>UniRef50_C0MA80(76-271:300) Pseudouridine synthase n=6 Tax=Streptococcus RepID=C0MA80_STRE4   E=9e-22 s/c=0.54 id=37% cov=85%
-------------LDIVYEDEHFLILNKPAGYASIPSAIHSNTIANFIKayyIKQDYPnkQVHIVTRLDRDTSGLMLFAKHGYAHARLDKQLQQRAINKRYYALVCGQERlPDQGEIIAPI-----GRTDDSIITRTvtpkGKYAKTSYKVIARYPENVSLVDITLHTGRTHQIRVHFAHLGFPLLGDDLYGGRLDLGMT-RQALHCHHLSFTHP--------------
>UniRef50_B1H073(7-220:238) Ribosomal large subunit pseudouridine synthase C n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H073_UNCTG  E=9e-22 s/c=0.49 id=37% cov=89%
---------------IIYQDENILVVNKPSGMFVIPGR-NIYENKTLVEILRNQLKQKlwVVHIIDRDASGVLVFAKNPETHRNISVQFENSKIRKKYIALLSGVLEENEGTINKPLIISGKNVR----IDITGKESITDFKVLENFRSYTLVNAL-PLTVKRHQIRIHFWSLGHPLAIDgeygtldpiflssfkRGYKIKKGKTENPlisRLTLHAAALTLILPGSGEEKTFEA----
>UniRef50_B9DS29(76-287:301) Pseudouridine synthase n=85 Tax=Firmicutes RepID=B9DS29_STRU0   E=1e-21 s/c=0.50 id=38% cov=91%
-------------LDIVYEDDHFLVLNKPVGYASIPSAI--HSNTIANFIkayyfEQNYPnkQVHIVTRLDRDTSGLMLFAKHGYAHARLDKQLQKRSIEKRYFALVSGNGQ----LPDFGEIVEPIGRSKDSIITRTvdpmGKYAKTTYEVVARFAENVHLVDIKLHTGRTHQIRVHFSHIGFPLLGDDLYGGRMDLGI-ERQALHCHFLSFFNPFTENESihTINLTEDF
>UniRef50_B7P2L1(1-234:263) Ribosomal pseudouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7P2L1_IXOSC  E=1e-21 s/c=0.45 id=37% cov=97%
--MEDNHGISERSICVLHLSPHFVVVDKPADVVINTQRPDEHPVTVETLLKRLHPELvdtgvhhsfRFCHRLDFSTSGVLCLALHKQSARSAQRAFHQRLAKKYYVAILEGHVRDDHVLVDSPIGEDKRPQHSHKMCTAdkdycvSPRGAQTRLLVLwrgLLKGRPATKVLLRPVTGRRHQLRVHCASLGHTIVGDFTYGED---ASSRRMFLHACRLVL--PTEVETLDVETPdpfaADF
>UniRef50_C1FEQ4(98-347:357) Predicted protein n=2 Tax=Micromonas RepID=C1FEQ4_9CHLO   E=1e-21 s/c=0.42 id=37% cov=97%
--------PENIPLDVVFEDDHLVVVNKPPGMVvhpsaghaggSLVNALLFHCNERSNRGDDaskmiDVPRLGVVHRIDKGTSGLLVMAKDAAAQAGLQTQFANRSVRRRYLAIVLGTPARESGRIDAPIGRDPADRLKMAIVRgATGRQAISNFGVrARLVRGNASLVEWQLETGRTHQIRVHAREMGHPIVGDEAYggggsaaaeflrrdgamsaaAAREIVAKCARPMLHARSLGFRHPVTGEEISFAVepPPDF
>UniRef50_D2R760(381-592:603) Pseudouridine synthase, RluA family n=2 Tax=Planctomycetaceae RepID=D2R760_9PLAN  E=1e-21 s/c=0.50 id=36% cov=92%
---------------VVYEDEAIAVVHKPAPLpLHASGRFHRNTLEWILREIYDPQKPRPVHRLDANTSGLVLFARTRHFAKLLQQQFTQGKVEKFYLALVSGHPVEDRFVSTAPISAEAGVFGSRSVDEEAGLPAETRFEVLarTTTADGkpVALVRCQPITGRTNQIRVHLWQLGHPIMGEQSYLADQKHGTTqthtvddPPLCLLAHQLSFQHPVSRERMTFTS----
>UniRef50_Q4FN11(77-308:326) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q4FN11_PELUB   E=1e-21 s/c=0.45 id=35% cov=94%
--------PYNFKLQIVYEDDDLLIINKPAGIIMHPGAgnydetivnalMHYNKDSLSTIGDELRPGI--VHRIDKDTSGLIVIAKNNETHENLSHQFSEHTITRVYQLLIWGKLRPSSGKIDTFITRSSKNRQMMEVSNSKGKRAITNYKTIEiFENDKTPTLSLvecRLETGRTHQIRVHMTHMGNSIMGDGKYKKKYKKLKNidtnlenliyklDRQFLHAQTLGFIHPRTNEEMVFTS----
>UniRef50_C1E6N6(132-353:363) Pseudouridine synthase n=2 Tax=Micromonas RepID=C1E6N6_9CHLO   E=1e-21 s/c=0.47 id=40% cov=90%
----------------VHEDADYAVVNKPWCVrldtpRGWPGKVRFTPKypgdlSVEDWLERRYPDWDTVrfcHQLDNATSGVLVAASNKRAAGAAAKLFRERRARKTYLAIVFGHPEQDEWTVDVPMGRD-PDDPKgfrERVDPEHGKACETRFRVLKRGRLNlrgkfegvpVSKVEVTPVTGRRHQIRLHLQFSGHPIVGDNAYSQD---TDSFRTFLHAHKLTLPFDEPRGTMQFVAP---
>UniRef50_C6XFD0(90-325:340) Pseudouridine synthase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD0_LIBAP  E=1e-21 s/c=0.44 id=39% cov=93%
-------------LDILYEDDDIIVINKPAGLVVhpAPGNwtgtlvnaLLYHCHNNLSSIN-GVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFvdhgKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGiddKTADSAITHYQTIEiYNKNSNFAVSLLKChleTGRTHQIRVHMAHKGNPLIGDPLYGkgfktkanivnnnAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVP---
>UniRef50_C8W9Q3(10-230:246) Pseudouridine synthase n=2 Tax=Atopobium RepID=C8W9Q3_ATOPD   E=1e-21 s/c=0.48 id=31% cov=92%
-------------LEFLYQDDYLLAVNKPAGMIvhsdgtnepSLTDLVCEKLCALESSNKIDLSQVQALNRLDKETTGIVLFSLKKETQPQFDQLIASKELSKEYLAVVKGDFGLNKLLIDKAIGKDRHDAQKMRIS-DTGKPSQTEVRLIKVASSAQGQIqsllLVNLLTGRKHQIRVHLSSLGFPLVGDVLYGGMSSLQRKTKkkhrpqpLMLHAYRIGFIHPVTGAKIVIK-----
>UniRef50_Q1J0S8(92-314:341) Pseudouridine synthase n=7 Tax=Deinococci RepID=Q1J0S8_DEIGD   E=1e-21 s/c=0.47 id=39% cov=94%
--------PEAVPLDVLYEDEHLIAVNKPPGMVTHPAPGVTSGTLVNALLGRltlpEQPGAVGpdgyrpgiVHRLDKDTSGVIVVAKTVEAHARLAAAFKDRSTHKTYLaiaAGMWKAQGPVS--VNAPVGRHPTARQRMTVGGVGPREAQTLFTPLATHPDGHGRTLalvrAQPHTGRTHQIRVHLAHLGSPILGDAVYG--RASAVMPRHALHAQFLTLPHPVTGETLHLHAP---
>UniRef50_B2A2J2(86-307:328) Pseudouridine synthase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J2_NATTJ  E=2e-21 s/c=0.47 id=35% cov=95%
--------PQSIPLDIVYEDEYLLVVNKPRNMVVHPG-AGNYRDTMVNALlyhcqnlsdGTSYERPGIVHRLDKDTSGLLVVAKQNETHDILSEEIKNRRVARTYLALVIGDFSKKKATIDLPIGRDPRNRKKMAVVH-GGKRAITKVEMLRSFQNPEKISYLKCSleTGRTHQIRVHLSHLGYPLLGDPVYRGKTGKNVdidknLTGQALHSFSLAFTHPVFKKTMVFRAP---
>UniRef50_D0MJ49(86-338:355) Pseudouridine synthase n=2 Tax=Bacteria RepID=D0MJ49_RHOM4   E=2e-21 s/c=0.41 id=41% cov=93%
-------------LDIVYEDPYLIVVNKQAGLVVHPARGNRSGTLVNallyyigsgpvrfdeeddlpeddeiglsmvstgpTEAKLEAPRPGIVHRLDKDTTGLIVVAKDDVTHTGLARQFEHRTIARTYLAIVWGVPDPPRGRIEAAIGRDPRDRQRMAVVpDDRGKRAVTHYEVVE-ALPAAALVRFKLETGRTHQIRVHARHIGHPVLGDPTYGgrtirygphTPRRRAFYDQLFarltrqaLHAHTLGFRHPRTGEWLEFEAP---
>UniRef50_P0A5T2(81-292:308) Uncharacterized RNA pseudouridine synthase Rv1540/MT1592 n=131 Tax=Actinobacteria (class) RepID=Y1540_MYCTU  E=2e-21 s/c=0.49 id=39% cov=91%
-------------MTILYSDDDIVAVDKPAAVAahasvgwtgpTVLGGLAAAGYRITT--SGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPDPSSGTIDAPIGRHRGHEWKFAIT-KNGRHSLTHYDTLEaFVAASLLDVHLE--TGRTHQIRVHFAALHHPCCGDLVYgADPKlaKRLGLDRQWLHARSLAFAHPADGRRVEIVSP---
>UniRef50_A3I3R5(67-276:279) Ribosomal large subunit pseudouridine synthase n=2 Tax=Bacillaceae RepID=A3I3R5_9BACI  E=2e-21 s/c=0.50 id=34% cov=94%
-----YKPTPVCAIDIVYEDDHCLIVSKPKGMATHPNDDRDTHtcmNHVIAHIQQQGGMyAEHVHRLDKGTQGLLLVAKHPLAKSIFDRMIEEKSIIRTYAAEVQGNIRSSSGTISESIGKD-RHHASRRVVSKTGQHAVTHYEVVSrYKNSCVVHLILE--TGRTHQIRVHLAYIGHPIIGDTMYGARE--TVSDDYELHAIQLEFDHPFLNKRITVK-----
>UniRef50_C9KIU1(73-282:296) Pseudouridine synthase n=3 Tax=Veillonellaceae RepID=C9KIU1_9FIRM   E=2e-21 s/c=0.50 id=37% cov=93%
--------PEDLPLDIRYEDDYLLIVNKPAGQLVHPTTKEAHgtlGNAVLywYKAHGEHHAYHPVHRLDRNTSGLVLIA--KVPQVQYKLTPRHGEGKlfhREYLALIEGELTPPEGLIDAPIARALPSIILRKVSPD-GQTARTHYDTVQTDG-KLSLIHLVLDTGRTHQIRVHLAHLGHPLLGDDLYGGNLAR--IKRQALHAARLHFRHPMTGAEIDVQVP---
>UniRef50_C8P137(62-272:291) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P137_ERYRH  E=2e-21 s/c=0.49 id=40% cov=89%
---------RDTPLQILYEDKDILVVDKPYKLLTVSNRKEEELTAF--RLASDYVKKQDsknrifvVHRLDQDTSGVLMFAKSEYVKRLYQDKWSELVDERLYVAIV-------EGVVpkDKDVIRSFLRQNKTTHMYSTssGQEAITNYEVIKRTENNTI-LKIQIDTGRKNQIRVHMNDIGHPIIGDKKY---DAKTNpLKRLGLHAYRLRVMNPKTKKMMTFVSP---
>UniRef50_D0LU78(101-339:369) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU78_HALO1  E=2e-21 s/c=0.44 id=38% cov=95%
-------PPCPRTIGVLYSDPHMLVIDKPAG-LPVHASARFYFNTLTRVLGERFPGQpmQICHRLDRETSGALVVARGKPEAARLKGAFADKRAHKTYLALVWGDPPWPDGawdsapeddaIIDLPlgLVADESARIKIRMEVRAGAlPSLTRVRVLERRG-RAALVRCLPLTGRQHQIRAHLAACGHPIVGDKLYAHGDdvfaaycDRGMTPELLervrlprqaLHAAAIALPHPFEGRQVRAESP---
>UniRef50_B9XHZ1(381-589:599) Pseudouridine synthase, RluA family n=2 Tax=Verrucomicrobiales RepID=B9XHZ1_9BACT  E=3e-21 s/c=0.50 id=34% cov=92%
---------------ILHEDEALIVLNKPAPLpMHAGGRFNRNTLEYILH-QVYHPQKpRAAHRLDANTSGVVLVTRTRHFASHLQPQFAHGEVGKFYLVKVQGTPKEDSFSCNAPISAEPSEAGAREVDFEEGLPSRTEFRVLQRNADGTTLLEARPLTGRTNQIRVHLWQMGLPVCGDPVYlpgnklgETQTLRVEDAPLCLHAWRVTFLHPLHRQRMEFTAP---
>UniRef50_C1CWT3(77-295:321) Pseudouridine synthase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWT3_DEIDV  E=3e-21 s/c=0.47 id=39% cov=92%
-------------LDVIYEDDYLIAVNKPPGMVThpAPGVLSGTlVNALLGRMplpeQPDYDSEAGyrpgiVHRLDKDTSGVIVVAKTVGAHARLAAAFKDRETRKTYLAIAagqWRADGPAR--VEAPIGRHPVQRQRMTVGGANPREAQTLFTPLAAHPDGHGRtlalVRAQPRTGRTHQIRVHLAHLGSPILGDAVYGRSSETML--RHALHAHFLSVPHPGTGRLLHLHAPA--
>UniRef50_C0QPR5(87-301:319) Pseudouridine synthase n=4 Tax=Hydrogenothermaceae RepID=C0QPR5_PERMH  E=3e-21 s/c=0.48 id=36% cov=90%
---------------ILFEDEDIAVVYKPAGMVVhpSPGHTSGTLVNALLYHFRNISEyggkerAGIVHRLDKDTAGLMIIAKSEFAHKELQKQFQERTVDKRYIAVVTGIVQNDHGFIDLPIGRSIYNRKKMGTEATNLRDALTEYWVKNRSeKENLTVVDIKLHTGRTHQIRVHFSAIGHPLFNDKVYGfkksqlrSEKMRSISDQTLYHALLayrIAFDHPRTGEKI--------
>UniRef50_Q0F3G2(83-308:325) Possible pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G2_9PROT  E=3e-21 s/c=0.46 id=36% cov=95%
--------PEDLPLDILFEDEHLIVLNKPAGIVVHPSHGHDHGTLVHALLHhcKTLPGINGverpgiVHRLDKDTSGSLVIAKSEVVHQRLSEMFAEHNLNRQYIAWCRGVPSWRVKCIELP-IGRHPHQRQKMAVTDSGRESITD-AAVEHIFGPFSQMRLTLHTGRTHQIRVHMAHENLPVLGDPVYARsyhpgreiPEparhAIATLSRQALHAELLEFDHPISGEPMSFRAP---
>UniRef50_Q1AVY4(78-278:305) Pseudouridine synthase n=2 Tax=Rubrobacteridae RepID=Q1AVY4_RUBXD   E=3e-21 s/c=0.51 id=42% cov=89%
---------------ILFEDEHIAVVDKPAGMVVHPGAGNRSGTLVNALLGRGIAGGEDperpgiVHRLDRDTSGLMVVAKGEPAYSRLVEMLAARRVRRVYRALVVGEGLPPSGTVDSPVGRD-PENPAL-MAAGVGRPAVTHFEVLGEAAGHTMlRVRLE--TGRTHQIRVHLSAIGYPVYADPLY----GRAVpGRRLWLHAERLSFEHPAEGRPLDFFSP---
>UniRef50_C8X1I9(93-303:547) Pseudouridine synthase, RluA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1I9_DESRD  E=3e-21 s/c=0.49 id=39% cov=88%
---------------VVYSDPDVVVVNKAAGVTVHPgtgcesGTLVHHLAALYPELARfDGERPGVVHRLDKDTSGLLTVALNESARLALTRSFARREVDKEYLTLVHGRPE-AEGTVDHPLGRDPQSKIRMAVVPRGGKEALTRFKRVWTSPDGRVSLLrVRILTGRTHQIRVHMAYLGFPLVGDALYG-PQAQAafqrsrpllarLAKHHMLHAWRLAFPHPRSGR----------
>UniRef50_Q1WS68(88-286:304) Pseudouridine synthase n=2 Tax=Lactobacillus salivarius RepID=Q1WS68_LACS1  E=3e-21 s/c=0.52 id=37% cov=88%
---------------IIFENDDLLVVNKPQGIKSHPN--QPYETGTLVNYIAGYLDARDehpymVHRLDMLTSGAMIVAKNPVVVPILTRLISTHTIKRDYLAITEGIFDQKEGVIDLPIGKDENDKRKRKVDGIGALPARTRYQVIKEFENNSV-VYLRLETGRTHQLRVHLSAMGHPIVGDVLYnhVSEEKHMM-----LHGYKQKLTLPFSMRELELKA----
>UniRef50_Q1VZ16(87-278:292) Pseudouridine synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZ16_9FLAO  E=4e-21 s/c=0.54 id=39% cov=83%
-------------LKVIFEDDSMAVVNKPEGYPTNGNYFKTIENALTynlkTSSEKDklpYPQP--VHRLDNPTSGLLIIAKTLSSKSYLSVLFEHNKVHKIYLAIVEGH---FEGLSDiISLDID-------------GKQSSTNYGVekmFKINQDEFSLLSLKPSSGRTHQLRIHLSKIGHPIVGDKTYGS---LTLSNKLMLHASSLELRHPKTDKSLSFE-----
>UniRef50_B8I750(74-290:299) Pseudouridine synthase, RluA family n=2 Tax=Clostridium RepID=B8I750_CLOCE  E=4e-21 s/c=0.47 id=35% cov=95%
--------PQDIPLDVIYEDECMLVLNKQSGIVVHPTSY--HPDNTIANGIVYYLKQKGvtkkvrpVSRLDRETSGIIIFAKNQFTQEMLIQQMHNNLFKKEYLGIVQGIPQNNEGTINLP-IARKPGSIMLRHISEEGAPSITHYKILKtFPSHNSALLSFKLETGRTHQIRVHCKAMGFPIYGDTLY-SDNTNLFISRQALHSYRTEIIHPVTLKGVIFKAelPSD-
>UniRef50_Q6MEC0(82-295:318) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEC0_PARUW  E=4e-21 s/c=0.48 id=37% cov=94%
--------PENIPLSILYEDEHLLVINKPAGMVVhpAPGNWSgTFVNALLYYCQKlpllpDTIRPGIVHRLDKGTSGLLVAAKTLETQQKLIELFASRKVYKAYLAICIGR--PADGEIQAP-IGRHPIHRKQMAVIPTGKPAISFCKTLGW-SDKLSFVQIEIATGRTHQIRVHMKYRGSPILGDPLYGqiSLNQYYSVPHQLLHAAVLRFQHPISLENLEFCTP---
>UniRef50_Q7UHX8(74-316:334) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UHX8_RHOBA  E=5e-21 s/c=0.42 id=40% cov=95%
--------PENIPLDILYEDDGLVVINKPAGMVVHPARgnwTGTLTSALAFRFQSlsdvgGPTRPGIVHRLDRDTSGVIVVAKNNAVHLNLAAQWHDRLVQKEYTAITFGRLDRDRDWIHASIGRHPYQRDKQAIreGHATSKTASTFYEVVERHGRVT-RVDVRPKTGRTHQIRVHLAHIGCPILCDRLYGghselsrsqirrlagtevatpgvkpTPEGEEiLLSRQALHAKALTFTNPQTGKEMTLTAP---
>UniRef50_C7TK72(71-276:278) Ribosomal large subunit 23S pseudouridine synthase D n=8 Tax=Lactobacillus RepID=C7TK72_LACRL  E=5e-21 s/c=0.50 id=36% cov=92%
--------PETPHLNTRYEDDDLLIVDKPAGMKTHPNQPGE-TGTLMNQAAaylAPFP-ALITHRLDMATSGLLVIAKNPLAQAIINRQLTTKTMHRDYLAVV---PSgiPEKGTIQAPIGHD-PDDKRKRMIRADGAFAVTHYHRIAETAD-TATIELNLETGRTHQIRVHLASIGFPIIGDPLYAATET---ATRMQLHAFRVRLIRPLTIEPLTVTSPSPF
>UniRef50_C0BNA6(127-358:379) Pseudouridine synthase n=7 Tax=Bacteroidetes RepID=C0BNA6_9BACT   E=5e-21 s/c=0.44 id=39% cov=93%
--------PEDIPLDVVYEDSDLMVVNKPPGMVVHPG----HGNYSGTLINallfhvKDLPLNADerpglVHRIDKDTSGLLVVAKTAKAMTHLAKQFFDKTSEREYVAIVWGNVEEEQGTVRGHIGRHPKNRLQMAVFpdGDQGKEAVTHYKVMERLGYVTlVSCVLE--TGRTHQIRAHMKHIGHTLFNDERYGGEKilkgttftkykqfvdnAFKALPRQALHAKTLGFVHPSSGELMRFNTP---
>UniRef50_A6TSZ4(81-295:308) Pseudouridine synthase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSZ4_ALKMQ  E=6e-21 s/c=0.47 id=33% cov=94%
--------PQEIPFNVVYEDIDVIVINKEPGIVSHPTK--SHPKDTIANAAQNYLEKKGvacrirfVNRLDMDTSGLLVIAKNPYTHHIMSQQMKANEITKKYVAFVKGVVVANEGEID-GAIYRSSDETIKRVVDDRGQQSLTKFTVLERYADATM-LEVSLLTGRTHQIRVHMESIGHPMLGDHLYGYVDTE-LIRRQALHASYLSFLQPRYKEKIEVRAslPKD-
>UniRef50_B1H0R5(88-282:296) Pseudouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0R5_UNCTG  E=6e-21 s/c=0.52 id=36% cov=87%
-----------------------VVVNKRSGIVVHPS--YGHLSGTLLNALMGYSAGKYnpylIHRLDKDTSGVIVFAKTEKAKISISKQLQKRVVKKIYYAAVKGVIAENRGIIKAPLGRSPKNRKLVSVNPLAKKVAITEFKVIERKDDYTL-LKVRIITGRTHQIRSHMKYINHPVIGDKQYGGPGTIGLkrCERQMLHAHNITFTHPSTSKTVKFIA----
>UniRef50_Q13E92(178-415:426) Pseudouridine synthase n=28 Tax=Alphaproteobacteria RepID=Q13E92_RHOPS  E=6e-21 s/c=0.43 id=38% cov=94%
-------------LEIVHEDDDIIVIDKPRGLVVHPAAGHETGTLVNALIAHCGESLSGiggvrrpgiVHRLDKDTTGLMVAAKNDRAHQSLSAQFadhgRTGELRRGYYAFVWGAPNRIRGTIDAP-IDRHPHAREKMAVRDGGREAITHWEVLETFTGRSGGEIVSLIacqleTGRTHQIRVHLAHIGHPLLGDDVYGphfktkasqlRPDARAALTdlgRQALHAYLLVLEHPSTGEVVAWESglPAD-
>UniRef50_D1ASB1(91-272:299) Pseudouridine synthase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ASB1_ANACI  E=7e-21 s/c=0.56 id=39% cov=83%
---------------ILYEDQNVIAINKPAG-VSVQGgsKVGVSIGDLLDKI-RPGGCCRIVHRLDKDTSGVLVLARDLDVARCLAREFRERRVQKEYIAITKGVPHSASGEVNTPIFYKVQSATGERMLE---KDAKTFFSVTRVLG-NFAVVLLRPVTGRKHQLRIHMSQIGCPIVGDSKYCKC-GPVEKETLHLHASLLTF-----------------
>UniRef50_C1ZMP6(6-216:246) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMP6_PLALI  E=7e-21 s/c=0.48 id=39% cov=90%
---------------ILFEDNHCLVVEKPAGVLTMG---DETGDENMVQLAMDDLKIRHqkpgnvyvglVHRLDRPVSGVLLLAKTSKAASRLSAQFREREPEKVYLAIVEGQLNPAAGEIVDWLIKDQERNHTRVTSPQTpgAKQAKLRYRQLETLVTPEGirtLVEVQPMTGRSHQIRVQLAHAGASILGDLRYGS--KTPLGKMIALHARSLTFEHPVQKQPLTIYAP---
>UniRef50_Q01Q94(77-284:296) Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Q94_SOLUE  E=7e-21 s/c=0.49 id=34% cov=91%
-------------LRILYEDADVVAIDKPAGMVVHAG-AGVHSGTLVNALLHRFATLSGvggplrpgiVHRLDRFTSGVLLVAKNDAAHQKLAAQFSGREIEKVYLALVHGTVKPETGRIERPIARDPVHRARMTARLAEGRAAWSEYRVLRRFPDFTL-LEVRIGTGRTHQIRVHLASIRHPVVGDTLYGAP-AQPLLGRYFLHAHRIRFHLPS-GREMLIESP---
>UniRef50_C7GZU4(96-321:331) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZU4_9FIRM  E=7e-21 s/c=0.45 id=34% cov=96%
-----YNANEEGILKigILYEDDYIIVVDKPAGLLT-HAKGDKSCECTLSDKILEYTEGSlangsganrpgVVHRLDRGTCGVMVMAKTDTALKHLTEAFEKQEVSKEYEAIVYDNIVRDSGVITAKIERNKKNRLKMSAGDE-GREAHTEFKVIErFGKFTYVSLVIK--SGRTHQIRVHMNYIHHPVLGDMLYGKRKDKFNLMWPMLRSKKIGFLHPITSEKMEFTAamPYEF
>UniRef50_B1YJB1(81-285:293) Pseudouridine synthase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJB1_EXIS2  E=7e-21 s/c=0.50 id=38% cov=89%
-------------LDILFEDDWLLIVNKPPGMASIPSRL--HPERSLSNFvlgyyrQHQIPYAiHIVNRLDRDTSGLVVFAKHSLAHHQLSKMQQNGLLDRRYVALIEG-TIPAQ-TIDLP-IGQTDHSFMERMVREDGQQAITHIltsEPITAFSRELSRLTIKLETGRTHQIRVHLAALGHPLVGDTMY---KGTPLIARQALHSASATFPHPGTGEVMTFVAP---
>UniRef50_D2R7T3(109-338:355) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7T3_9PLAN  E=1e-20 s/c=0.44 id=38% cov=95%
------NPEKIP-LDILFEDEHLIAVNKPPGMVVHPAR--GHWSGTLTSALAFHFQQLStvggqhrpgiVHRLDRDTSGVIIVAKTDPVHFSLAAQFADRTTAKEYFAITAGVPDRDRDVVSQPIGIHPFHREKMAIrpGHSTSRDAETMFHVLERFAQHAA-VECLPKTGRTHQIRVHLAHVRTPVLCDKLYGGraeitqgelvrdGSTEVVLNRQALHARKLSINHPKTGERLTIEAP---
>UniRef50_P44433(100-308:322) Ribosomal large subunit pseudouridine synthase C n=22 Tax=Gammaproteobacteria RepID=RLUC_HAEIN  E=1e-20 s/c=0.49 id=34% cov=92%
---------------ILFEDDCLIILNKPSGIAVHGG--SGLNFGVIEALRALRPEArflELVHRLDRDTSGILLIAKKRSALRNLHEQLRVKTVQKDYLALVRGQWQSHIKVIQASLLKNELSSGERIVrVSEQGKPSETRFSIEERYI-NATLVKASPVTGRTHQIRVHTQYAGHPIalddkYGDKDFDKQMNELGLNRLFLHAFSIRFEHPKNGETLRFNASLD-
>UniRef50_B6BNM7(80-292:325) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNM7_9PROT  E=1e-20 s/c=0.48 id=38% cov=91%
---------------ILYEDDDVLVINKPSGVTVHPApSVKEatlvdwlkHKGIRLSNISGEERHG-IVHRLDKGTSGTMVVAKNNEAHEFLSEQLQDKSMGRYYLA-VLNPPLKDEiTTIEQNIGRSAHNRLKM-TCTDAGKSkyAKTMFKVLSLSNDEKQQFVaCKLFTGRTHQIRVHLESINRHIIGDHIYAlSPKAEK-SERILLHAYMIYFVHPTSKEKLTFVAPLD-
>UniRef50_B9JRD0(90-326:342) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JRD0_AGRVS  E=1e-20 s/c=0.43 id=38% cov=93%
-------------LTVLYEDKDLIVLSKPAGLVVHPGagnwtgtlvnALIHHCGDSLSGIG-GVKRPGIVHRLDKETSGVMVVAKNDIAHRHLADQFadhgRSGPLERAYQALVWGRPRGLRGTIDAALgrAGDRTKRTVKREDTDDAREAITHYQVMERYGEKPDATCLASLvecrleTGRTHQIRVHMAHIGHPLIGDPEYGAAfktkanllpdAAKAIVTnfhRQALHAYLLAFEHPTTGDVMHFAAP---
>UniRef50_D1BPK7(78-266:288) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK7_VEIPT   E=1e-20 s/c=0.54 id=38% cov=84%
-------------ITVLYEDAHTLVVNKDPFMLVHPA--GQTKSCTLSNYVAGYYAKKNvvhkvrpVHRLDRDTSGCILFGKTKEAQQYYTDELQAGRIDRIYTGLVEGRID-ANGMVDAPIGVD-PVFDNRRVIDELGQPAQTEYIVLDHEGDNTL-LRFKLLTGRTHQIRVHMEHIGHPIVGDAMYGTRNKPYI--RQCLHASELTF-----------------
>UniRef50_B5Y8D7(86-291:315) Pseudouridine synthase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8D7_COPPD  E=2e-20 s/c=0.49 id=36% cov=88%
---------------VVYYDEHLAVIDKPPNLVvhpapSVKGLTLCHG------LLKDFPQVKNvgsaerpgiVHRLDKDTSGLMLVALSEKGYAGLTKMISEKSVSRKYLVAVYGVANrPFE--VDAPIGRD-PRNPTRMAVVPHGKNAYTRFRPVQ-CLEKVSLLEAELFTGRTHQIRVHLSHAGFYVLGDPVYGNVESRLLAPRVFLHSYYLELEHPITGERLFFVSP---
>UniRef50_D2RBY1(82-303:321) Pseudouridine synthase, RluA family n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBY1_GARVA  E=2e-20 s/c=0.45 id=37% cov=93%
------NESSVCNIPIIYNDDDVVVIDKPVGVAShaakgwsgptVPECLEAVGIDIKTTLC-DESRKGIVSRLDVGTSGLMLVCKTDFAYEVMKNQFAKHIVKKTYHALVQGDLAQDKATIDAPI-----GRAKvsdfRFTITSDGKPAVTHWDVLERFSQATL-VSVNLETGRTHQIRVHFSSIGHPLVGDSMYGANPVLAQKlglQRQWLHSMELTFTHPRTGKSVTVKS----
>UniRef50_A6ESW1(87-283:300) Pseudouridine synthase n=1 Tax=unidentified eubacterium SCB49 RepID=A6ESW1_9BACT  E=2e-20 s/c=0.51 id=34% cov=88%
-------------LKVLFEDNHLAIIHKPAG-VEVSGNKKYTIENALPSLLKKSNQKDALdrplpaHRLDYPTSGCLLIGKTSETLQALHRMFEKREISKKYIAVTLGN-QITEGKIDKPI--------DDKASLTTFKTLQT-ITSKKYNALNL--VLLTPHTGRRHQLRKHMMQLGNPIFGEKTYGDINDQGKGSGLFLHAIALSFKHPIDNKTLIIKSEA--
>UniRef50_A8Z5T0(96-321:337) Pseudouridine synthase n=3 Tax=Candidatus Sulcia muelleri RepID=A8Z5T0_SULMW  E=2e-20 s/c=0.45 id=32% cov=92%
--------PENLKINIFYEDEYVIIINKQSGLVVHPGKGNE-SMTLINGLHFYFLKKKNiynkipilVHRIDKGTSGLILVAKDKNILEKIYKQFYINHIKRKYITLVWGYIKNNKG----TIICNIGRSLKNRIYMNVfpngiyGKFSITHYKVLErFKYVTLLKCTLE--TGRTHQIRVHLKYIGHPILNDKDYGGnhtfKEKKNIKKLFInmkyqaLHAYYIEYIHPIYRKKNYFICP---
>UniRef50_B9YI75(99-316:329) Pseudouridine synthase, RluA family n=1 Tax='Nostoc azollae' 0708 RepID=B9YI75_ANAAZ  E=2e-20 s/c=0.46 id=33% cov=93%
-------------LDILYEDEQLLILNKPAGLVVhpAPGHLDGTLVNALLAHCANLPGIGGvqrpgiVHRLDKDTTGAIAIAKTDIAYQHLQAQLQAKTARREYLGVVYGVPKTESGIINLPISRHPQDRKKMAIVptEQGGRTAITHWQIRERLSNYTL-IHFQLETGRTHQIRVHSAKIGHPIVGDSVYGA--GRSVGVNLaghALHAWQLKLQHPISGDwiQVTASPPQTF
>UniRef50_B5JUW4(97-305:321) Pseudouridine synthase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUW4_9GAMM  E=2e-20 s/c=0.48 id=38% cov=90%
---------------ILFEDERLLVINKPSGMAAhagsgVPFGIAE----AVHQHHCDGKRTELVHRLDRETSGCLLLAKGRSVLNVLQDSFRQRETHKQYLALLVGDLKGSR-RVDLALQKTKLSGEAMVVVDEAGKSALSDFEPLAHYPWNDRTLTLARVtihTGRTHQIRVHARALGLPLLGDDKYGDERlnrdaKRQGLKRLFLHAE--SIRFPLEGQTLYFEAPLD-
>UniRef50_D1VS73(77-279:295) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS73_9FIRM  E=2e-20 s/c=0.49 id=36% cov=86%
---------------VIYEDEYIAVISKPQDLVVhigagnssgtlVNGLLYKFKNQLS---DLDPLRPGIVHRLDKNTSGLMIIAKNNQAHINLVDQFKNSQIKKYYLAIVHG-KTPESGIIAEPIGRNPNDRKKMAVVYKNSKQAITKYkklkEFQEYSLLN-----INLLTGRTHQIRVHMAYIGYPVLGDIIYGRKNSLKIDKQ-MLHSYKLIFNHPITNQKMEF------
>UniRef50_Q38W13(81-283:300) Pseudouridine synthase n=4 Tax=Lactobacillus RepID=Q38W13_LACSS   E=2e-20 s/c=0.49 id=36% cov=89%
---------------VLYEDDYWLVVNKPAGLATIPGPTNT-TDTLLNRIKGYWQQNGAtdlvphiITRLDFDTSGIVLAAKHQVAQSLLQPQIEQHQLQKFYLAVVAGTGLPEFGTIKAP-IGRVGVEPRRRVIAD-GQSAWTDYW--RLAQDERLTVLKVQIhTGRTHQIRVHLSDLDHPLVGDQLYEGPLGWGI-DRQALHAYQLTFNDPFSQQKRQFTAP---
>UniRef50_A5VLP2(71-286:290) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VLP2_LACRD  E=2e-20 s/c=0.46 id=35% cov=95%
--VESSNEP----LNVVYEDDNWLVVDKPAGVTSIPGPTVQN-DTVLNRV-KGYLIANNsadlrphlITRLDRFTGGLLLIAKHHIASSMISQQVQQHQMLKEYTALVEGQVMDEHGEINKPI--GRKDGQAARVIDENGQRALTEYWVEERGAKWT-RVRVRLHTGRTHQIRVHFAAIGHSLIGDHLYGGDTSK--YDHQLLHASKISFNDPFTLKQMTFTSelPAAF
>UniRef50_B7GEZ0(96-302:315) Pseudouridine synthase n=7 Tax=Bacillaceae RepID=B7GEZ0_ANOFW   E=3e-20 s/c=0.48 id=34% cov=92%
-------------LHIVFEDDHVLVVNKRAHMDvhpTQPGQTNTLANAVAFHFQCEgiYSKVRHIHRLDRDTSGVILFAKHALAGAILDQYLAKRTIRRTYIALVHGYVKQKKGTIEAPIGRD-RHHPTRRRVSKTGDTAITHYERLQYDKQKHVSLVrLTLDTGRTHQIRVHMSYIGHPLVGDTLYG---GKPWIDRQALHAFSLSFLHPFTEELITCSALPD-
>UniRef50_C5TPY8(28-249:264) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=C5TPY8_NEIFL   E=3e-20 s/c=0.45 id=39% cov=91%
-------------LDIIHRDSRTIAVNKPAGMLVHRSWLDKHETRFAVQTLRDqigqhvYP----VHRLDRPTSGVLLFALDTEAARLLTQQFENKTIEKTYWAIVRGYL-PSDGLIDYALKY-MPDKIAEAQTEATLQEAQTAYRClaqtelpfqsaLRYPTSRYSWAELTPYTGRKHQLRRHMKHIFHPIVGDTNYGDlRQNHAVAEhigtqRLMLHARSLSFQSIEDGSRITVNAPTD-
>UniRef50_D2QPA6(11-225:244) Pseudouridine synthase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPA6_9SPHI  E=3e-20 s/c=0.47 id=38% cov=90%
-------------LSILYQDTELVAINKPHGLLVHRSMIASDASEFAVQLLRDqlgqrvYP----VHRLDRKTAGVLLFALSESMNAIMQQQFMEGAVQKTYLAIVRGY-TPDELTIDYPLCKDDGNGAVgvlQEAVTHLKTLRQTEIPVA-FGKHPTSRyslVELTPTTGRMHQLRRHMAHILHPIIGDRPHGCNKQNKLFKEhfemntMLLHAQRIEFTHPVTQETTTIAAP---
>UniRef50_C7NAV5(93-312:326) Pseudouridine synthase n=5 Tax=Fusobacteriaceae RepID=C7NAV5_LEPBD   E=3e-20 s/c=0.45 id=36% cov=92%
--------PENIDIEIIYEDNDLAVINKKAGIVVHPanghysGTL---VNAILYHI-KDLSGINGeirpgiVHRLDKDTSGLLIIAKNDKAHLKLSQMFHDKTVKKIYLAILKGKLNQKSGRIVTQIGRDKNDRKKMTVINDlnSGKTAITNYEVI----SQTEKFTLVKVhieTGRTHQIRVHMKHLGYPILGDSVYGRTDTE---KRQMLHAYKLEFQHPITEENLEFiaKLPEDF
>UniRef50_A1HR26(63-277:301) Pseudouridine synthase, RluA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR26_9FIRM  E=3e-20 s/c=0.47 id=36% cov=92%
--------PMKMPLHIVYEDDFLLIVNKPAGLLVHP--TSDPTEPTLAHGILYYLHSKGalgafhpIHRLDRNTSGLVAIAKHPHIQHALSGG-GAKGLKRLYLAVVTGIPSSLMGRIDAP-IGRHPNSIIKRVVRSDGQPAITLYRVLS-TFSMASLVELELLTGRTHQIRVHLSHIGHPLLGDDLYGG--ATDLIRRQALHAASLSFRHPATDKVLTLTSP---
>UniRef50_Q0ANT2(90-292:330) Pseudouridine synthase n=2 Tax=Hyphomonadaceae RepID=Q0ANT2_MARMM   E=4e-20 s/c=0.49 id=35% cov=87%
---------------VIYQDDELIAFNKPAGLAVQGGsKTTRHLDGMLDAFGEGLDRPRLVHRLDKDTSGILIVGKGPKATARLAKAFQSHKTRKTYWAIAIGVPKPKmgeiKGFMRKAAASGVDSERETMVAAghgdEGAQHALTRYVVIGEAGQKASWVALRPVTGRTHQLRVHLAAMGTAILGDKKYTChrPAPEDLGRRLCLHARRLEIPRP--------------
>UniRef50_C6XLD8(37-239:272) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLD8_HIRBI  E=4e-20 s/c=0.49 id=38% cov=87%
------------------EDDSILAFNKPSGLaCQTRSPADRTFDALLqVYVKRNGKRPRMLHRLDMLTSGVIIAARTKPATSFFQQTFERREAYKSYLAIVRGPAfEKSEGVIDahLQRYQKEPNLALMRPCDVDGEGAQdarTRYLVLS-SQNDYHFLLLTPETGRTHQLRVHLEHFGRPILADPYYGTDalEGSYQPARLMLHAYRLLTPHPDGG-----------
>UniRef50_B8GZR6(103-327:342) Pseudouridine synthase n=2 Tax=Caulobacter vibrioides RepID=B8GZR6_CAUCN  E=4e-20 s/c=0.44 id=39% cov=92%
-------------LSILYEDAHLIVVDKAAGMAVHPApgtyngtlvnALLHHCGASLSGVG-GVARPGIVHRLDKDTSGVMVAAKSDAAHRGLSTLFATHDIDRLYVALTRGAPNPPTGTIQTQIGRSPGDRKKMAVLRAGGREAITHYR-VEAAfgpADRplAARVACRLETGRTHQIRVHMASKGSPCLGDPVYGAAQpAAAVRERIeaaglrrqALHAAVLGFVHPITGETLRFETP---
>UniRef50_C6XFC8(100-310:346) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Rhizobiaceae RepID=C6XFC8_LIBAP  E=4e-20 s/c=0.47 id=37% cov=89%
----------------LYEDSKIYVFNKPAG-ISVQGgsGIAYHIDGFLkSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLkkshigGDYVHVVKQN---EKGaNYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDhKYCANFKGNFTSPiqnKLYLHARYMDLPHPE-GGRLQITAP---
>UniRef50_O67638(84-297:316) Uncharacterized RNA pseudouridine synthase aq_1758 n=3 Tax=Aquificaceae RepID=Y1758_AQUAE  E=4e-20 s/c=0.47 id=38% cov=91%
---------------IIYEDEDIAVVEKPCGLVVhpSPGYTSGTLVNALLYHIKDLSSIGGverpgiVHRLDKETAGVMVIAKNNTAHRNLVRQFQERKTEKFYKVLVKGLVKKDYGAIDTP-IARHPVDRKRFWVRKEGKEALTEYWVLKrYEKYEITLLKVKIHTGRTHQIRVHFASIGHPVLGDRTYGFKSSSVpkellslMGECNMLIAYHLGFYHPTKGEWMVFE-----
>UniRef50_C0E4Q3(83-294:310) Pseudouridine synthase n=2 Tax=Corynebacterium matruchotii RepID=C0E4Q3_9CORY  E=5e-20 s/c=0.47 id=40% cov=92%
-------------LEILYADEDLIAVDKPVGVAAHPTVGWDGPTVVGGLAAAGYRISTSgpperngiVQRLDVGTSGVMVVAASERGYSVLKRAFKERTVSKTYHALVQGHMDPLAGTIEAN-IGRHPSSGWKFAVTSDGKHAVTHYETLEaFVAASLLEVHLE--TGRTHQIRVHMSALHHPCCGDPMYgADPQlsARLGLNRQWLHAVKLGFYHPADGRWLEIESP---
>UniRef50_Q3A0C2(81-304:326) Pseudouridine synthase n=13 Tax=Bacteria RepID=Q3A0C2_PELCD   E=5e-20 s/c=0.45 id=35% cov=93%
-------------LVILYEDRHLIVIDKPPGMVVhpAPGHYQGTLVNALLHHCQDLSGIGGelrpgiVHRLDKDTSGVMVATKTDSAHQSLAAQFKAHSITRRYIALIHGVLTGDRGSIDRPIGRHPTHRKKMSTTCRTGRHAVTHWRVLrRFDDDRLTLVELALETGRTHQIRVHFSEQQHPLLGDPVYGGSgrlktindpqllkRAKALG-RQALHARLLGFQHPETGKYLEFSSP---
>UniRef50_Q39Z12(3-224:270) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q39Z12_GEOMG   E=5e-20 s/c=0.45 id=43% cov=89%
---------------ILYRDEHLVAVHKPLGLLVHRSPIDRHETRFALQEVRDllgrrvYP----VHRLDKPTSGVLLFALDPAFARGLVGAFASGSVTKTYLAVVRG-TMPEEGVIDHPL-AEEPDRFEQgrgNAGERAPQSAVTGYRrladvelpvaVGRYPTSRYSLVSLSPRTGRRHQLRRHLKHLFHPIVGDTKYG--EGRhnrffreeLLTVRMLLHAVELTVPHPATGAPLTVCAPVE-
>UniRef50_A3RGY8(103-330:353) Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=A3RGY8_9BACT  E=6e-20 s/c=0.44 id=39% cov=95%
-----YKPEPMP-LEVIFEDDAILVLNKPPKLVVHPA--AGHWSGTLLNgllayapTLIDVPRAGIVHRLDADTSGLMVVAKTLAAQTDLVRQLQSRTVTREYWALVLGVPS-QRGVIDAAIGRDPRNPLRFKVsTTEAAKPARTHYATLDStknAGADISWLACRLETGRTHQIRVHLEHVGHPLIGDPVYrrrlpprGEPAARwKEFDRQALHACRLALDHPVSRQRLNwFHSPA--
>UniRef50_D2M2K8(78-286:298) Pseudouridine synthase, RluA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2K8_BACS4  E=7e-20 s/c=0.48 id=36% cov=93%
--------PYKIKLHIIFEDEHVIIINKPPHLPTIPTR-NEGEPSLAGAILAYYIENgipstfHAVSRLDRDTSGLVMVAKHRYMHDLCVKLQKSYEIKRSYVALVEGILSDDYNTIDLPISRKTTSIIEREVN-EFGKSAITHYEVLKrYSGATLLQLTLE--TGRTHQIRVHMSAIGHPLLGDTLYGG-DVRYI-DRQALHSHQLSFFHPINKREYTFHCP---
>UniRef50_O66114(8-197:219) Uncharacterized RNA pseudouridine synthase ZMO0505 n=10 Tax=Sphingomonadales RepID=Y505_ZYMMO  E=8e-20 s/c=0.52 id=40% cov=83%
---------------VLFIDAEAMIIDKPAGLPVTSVRdgslsLENYLASLCFGFKR-WPSI--VHRLDRDTSGCLLLARNPKMHRRLSEAFSQGQVKKCYWAILEGVPEKNEGIIDLPLLkISSPKSGWRIVADDKGKRAVTHWEIL---AKNKGRslVAFRPETGRTHQLRVHaATGLGLPIVGDPFYGSHKDENIS-RMMLHAHSLEI-----------------
>UniRef50_A9GP63(19-255:666) Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5  E=8e-20 s/c=0.42 id=43% cov=91%
---------------ILAEDGDLIVVDKPAG-LSTHAPEAERIDDMVTRLRaflRGRGDAEAylgIHqRLDRDTSGVLLFTRRREANAAVARQFEGRTVQKTYVAAVSGFGDrpprgtlrhrlvPAPGGAMRALAESGGAREDRAAKREdraagredraakredraaSGVLAITRYRLLERRGDR-ALLELRPETGRTHQLRVQLAAIGLPIAGDPLYGGPE----APRLLLHAAELRLDHPATGAAATFRSrlPAVF
>UniRef50_Q30SG9(80-290:323) Pseudouridine synthase n=5 Tax=Epsilonproteobacteria RepID=Q30SG9_SULDN  E=1e-19 s/c=0.47 id=34% cov=91%
---------------ILYEDDDILVINKPTGLTVHPApSVKEatlvdwlkHKGMRLSSLSGEERHG-IVHRLDKGTSGAMVIAKNNSTHEFLSDQLQDKSMGRYYLAVI--NPPLKDELTEviFPIARSSHNRLKM-APLEHGKYAKSAFKVLAYSNDEANQLIaCKLYTGRTHQIRVHLESLNRHIVGDHIYAQSPKQEKSERILLHAYIIYFIHPKSKERVSFVASLD-
>UniRef50_Q31IZ8(12-233:252) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q31IZ8_THICR   E=1e-19 s/c=0.44 id=38% cov=90%
---------------ILYQDDSLVAVHKPAGLLVHRSPIDRHETQFAVQMTRDqinqkvYP----LHRLDKATSGLLLFALDSNTARLMGQQFEEHTIQKHYLAicRGW---TAEHGEIDHALkhkldkLGDrhaQTNKPPQEALTNFERLATTDvmHKIGKFDSQRYSLVKLMPKTGRKHQLRRHLNHISHPIIGDVKYGDRHHNHFfntwlgQHRLYLAATSLTFNHPQTNARMTLNAPLE-
>UniRef50_Q2S1S0(1-205:232) Ribosomal large subunit pseudouridine synthase A n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1S0_SALRD  E=1e-19 s/c=0.48 id=38% cov=89%
-------------MTILHRDEHLLVVSKPPGLLAQPDQTGDpdvvsRGKEMLSDETEGAPFLGLVHRLDRPASGVMALARSPEAARELSRQFRERLVEKRYVVAVEG---TLQGIGAWTDYIAKPDRQPRLVdpDHPEGKRAALDWQVLESSSAHTlLQVTLQ--TGRSHQIRLQAASRGHPVVGDDRYGASDSlpdRAVA----LHHVLLRADHPARPRRETFVAP---
>UniRef50_A8F4Z7(86-280:294) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A8F4Z7_THELT   E=1e-19 s/c=0.51 id=37% cov=84%
-------------LDILYEDDNLLILNKKAGITIHPS--EKTRSTTLIQGLHFYGAKKGfkphlVHRLDRDTSGVLVIAKNVKTARTLSHMFRNRLVKKEYITLVSGKIF-GDGFIDKPL---------------DGSEALTEYKVLENFRDTSlLRVILH--TGRTHQIRKHFALIGNPVVGDILYGDKKVNELFKkkhnlrRQFLHCIRISFTNPSEPGVISIKAP---
>UniRef50_C5J6Q2(65-297:306) Pseudouridine synthase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6Q2_MYCCR  E=2e-19 s/c=0.42 id=36% cov=97%
--LNNYQEPqlkveaQKVDFEIVYQDNDIIVINKPKNLVVHPGNGNWDK-TLVNGLLHEFATNLSdvngeirpgiVHRLDKDTSGLLLVAKNNQAHKYLAKQLENHEIERKYIAIVVGKIPHTKMRINLPIGRDNQNRTKKVVSSFNSKNAITNVELINtFVYKNEHFSIVKCIleTGRTHQIRVHLSHIGYPIYGDPVYGK-KIDDLGQR--LHAYEITFKHLD-GRLMNFKTemPDEF
>UniRef50_A6QCU7(73-291:309) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QCU7_SULNB  E=2e-19 s/c=0.45 id=37% cov=91%
----------------LFSNRDFMIFEKPSGVLVHPNTMST-PYSMLDEIRHiSGDNANATHRIDMETSGLLLASKHKKAETHLKNSFEAKTIKKSYLAWVDGRLNEPFSVSEKIKINNDYSRVKHKVfISDAGKASHTDFIPLRYNERLDATLVaCYPQTGRTHQIRVHLFHVKHPILGDPIYGttfdtanryledeiSEEERFLetgARRLMLHAHTLSFT---YGNRFHIKSKSDF
>UniRef50_B1X0W4(85-302:304) Pseudouridine synthase n=2 Tax=Cyanothece RepID=B1X0W4_CYAA5   E=2e-19 s/c=0.45 id=35% cov=90%
----------------IYEDHHILVINKPSGLPVLPgGGFLEH--TLLGQLKKQYPKEKVfpIHRLGRGTSGLMLMGKTAIARSHLTRQMREHKMRKVYRTLIGENNLPDYFNIEHPIgkISD----PVLGYIYGAkadGKDAYSQCQIIERYSDKTL-VEVTILTGRPHQIRIHLATIGYPLLGDPLYvvgGIPKTGFKEQKetvnvpgdcgYFLHAYQLSFVHPATHQCLTFTCEREF
>UniRef50_Q1D9A6(82-293:316) Pseudouridine synthase n=2 Tax=Cystobacterineae RepID=Q1D9A6_MYXXD   E=2e-19 s/c=0.46 id=36% cov=91%
-------------LTVLHEDDSLVFVDKPAGRPSHPLQSGETGTVANALVARypecalaslDAREGGLCHRLDVETSGVVVAARTRDAWNAVREAFGSRAVDKRYLALVTG-PLTDEGDIDLPL-RHHPRHPDRvepaPYGAEDARDAVSKFTVLSRSGEFSV-VEVKILTGVLHQVRAHLAGIGAPIVGDSLYGGREAPELG-RFFLHARSLGLTHPQTRRNMTVHSP---
>UniRef50_Q8K9E9(77-300:315) Ribosomal large subunit pseudouridine synthase D n=4 Tax=Buchnera aphidicola RepID=RLUD_BUCAP  E=2e-19 s/c=0.44 id=33% cov=92%
--------PQNIALNTIYEDSNILIINKPPGLVVHPGAGNQDGTILNALLYRytnisSIPRCGIIHRLDKDTSGLMVIAKTIFSYNKLVTLLKKRKIIRKYQGIIKGN-MISGGIVNYPIM----RHPFKRICMTTdslGKKSITHYKIINRFKFHT-HVSFRLETGRTHQIRVHMLHIGYPLLGDPLYGGidygcnyfQENRNIYRKFnlfrqALHADYIEFIHPFTQKVMSWSA----
>UniRef50_A8GQ59(79-299:329) Pseudouridine synthase n=15 Tax=Rickettsia RepID=A8GQ59_RICAH   E=2e-19 s/c=0.44 id=34% cov=91%
-------------LDIIYEDDDLIVINKAAGMTVHPGA-GHHDDTLVnallyhTKNLSDIGSAARpgiVHRLDKDTTGLMVVAKNNKAHMLLANQIEQRQVIRKYKALVWGVINPLAGVIKNNIGRSRVERQKMSILKYGGKEAVTHYKTLELFYGGTISMVeCRLNTGRTHQIRVQLSHVKHSVVGDQTYGNNDRKiahsspALKAKLIdfkrqaLHSWYLSFTHPTSNKIMEF------
>UniRef50_D0RPR1(76-307:325) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPR1_9RICK  E=3e-19 s/c=0.42 id=35% cov=93%
--------PKKMDLNIIFEDQDIIIIDKPIGMVVHPGAgnyedtmvnglLYHCKNNLSGMNGEDRPGI--VHRIDKDTSGLLVVAKNDQAHAFIAKQFEEHSIKRSYLVFVYGILRPLHGKIETLIGRNKTNRQKMSADVIRGKDAITNYETLEVFKGNKipdislVKCILE--TGRTHQIRVHMSHKGNPILGDQTYGKKikkirgidqefeEILKSLKRQALHAHTLGFIHPTTNEEVFFAS----
>UniRef50_UPI00016C40E0(9-224:238) pseudouridine synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C40E0  E=3e-19 s/c=0.45 id=38% cov=92%
-------------LAVLYEDHHLVVVNKPAPLLTqAPPGVPNLEERVRAYIKDKYAKPAGVylgvpHRLDRPVSGVVCFARNTKAAQRVHSQFEHRSVRKVYWALVEGVVEPDAGVWD-DYIRKVENEARAARGHEgepGAKLATLEFRVLERFAAHT-RIELHPLTGRMHQLRVQSAWRGHPVIGDSLYGSvrpfgPPAELPRDRVIaLHARRLTFEHPFTKQELVIEAP---
>UniRef50_B3QB01(217-420:455) Pseudouridine synthase n=3 Tax=Rhodopseudomonas palustris RepID=B3QB01_RHOPT  E=3e-19 s/c=0.48 id=37% cov=88%
----------------LFEDADVLVLNKPAGLAVQGGSGTTRHIDQMLEVLRDAKGQKPrlVHRIDKETAGCLLVAKTRFAATALTGSFRHRSARKIYWALVAGVPKPKQGRISTYLAKEESEDDSimrvAKHGDDGASHAVTYYAVVETSGQKLAWVSLKPVTGRTHQLRAHMAHIGHAIVGDPKYFNIENwqlpGGLQNRLHLLARRIVIPHPRGG-----------
>UniRef50_A6LIG6(89-293:304) Pseudouridine synthase n=5 Tax=Bacteroidales RepID=A6LIG6_PARD8   E=3e-19 s/c=0.48 id=37% cov=89%
-----------PLLRIVWEDDDLIVINKREGLLSVS--TDRIKERTAYRILSDYlkecdPRNKifVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEAITQRTYVAVIEGRPEK-----DTDLIVSNLVENKHMQVYVTqdgdGKEAITRYRLLQ-TNNRYSLVELDLETGRKNQIRAQMQSIGHPIAGDSKYGAET--NPAGRLMLHARRLCFIHPVTGEEMRFE-----
>UniRef50_A1ZQW5(71-270:297) Pseudouridine synthase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQW5_9SPHI  E=3e-19 s/c=0.49 id=38% cov=86%
-------PPKqyEFTLEVVYEDDHFAVINKPAG-VKVSGNQYRTIVNMLPGNLKASPLpdalkwAKPVHRLDVPTSGLLMVAKTTQAHIHLGQQLEQKTIKKAYHAIVKGTPA-ARGHIRTPI---------------NGQSAHSEFEVLQTVpslrNETLSLVRLSPHTGRTHQLRVHLASLGHPITGDTTYDEAGNTMLHKGLFLAATSLQLQHPTLTQTI--------
>UniRef50_A8U9H8(95-304:309) Pseudouridine synthase n=2 Tax=Bacilli RepID=A8U9H8_9LACT   E=3e-19 s/c=0.46 id=36% cov=91%
-------------MTILYEDDAIIVIDKEAGLLSIAAKFAQ--ELTAHRQLINYVKQENqnnriyvVHRLDRDTSGVMVFAKTEKIKQDMQENWKEIVKERIYTALVEGVVREDEGTIKTWLTESKAMKVHSATYDNGGKLAITHYKKIRNNEDFTlleARLE----TGRKNQIRVHMETLGHPVAGDKKYGATSNP--LKRLGLHATTLALIHPTTGELVRFhsKVPKAF
>UniRef50_D1AV01(78-269:297) Pseudouridine synthase n=2 Tax=Bacteria RepID=D1AV01_STRM9   E=3e-19 s/c=0.51 id=35% cov=83%
----------------VYEDKYLAIINKYAGMVVHPSKGHEEDtlvNAIMYKI-KDLSGINGdlrpgiVHRLDKNTSGLIIIAKDDKTHFKLSEMFKNKEIKKIYYAIVKGKVNKKSGRIE-TMIGRNPNDRKKMAVVDNGKLAITNFEVI----DSNEKFSLLKVdleTGRTHQIRVHLSHFFFPILGDSVYGRKDE---YDRQMLHAYMLNFIHP--------------
>UniRef50_Q3AVX8(98-317:339) Pseudouridine synthase n=40 Tax=cellular organisms RepID=Q3AVX8_SYNS9  E=4e-19 s/c=0.44 id=35% cov=96%
-----YLKPQPMDLDVLFEDEHIIVLNKSAGLTvhPAPGNKDGTLVNGLLHHCPDLPGISGklrpgiVHRLDKDTSGCIVVAKSQEALVKLQVQIQKRVASREYFAVVHGVPDGDSGTIIGAVGRHPVDRKKYAVVSdESGRYARTHWTLIERFGDYSL-LRFKLDTGRTHQIRVHCAHINHPVVGDPTYSRCRKLPLdLPGQALHAVQLGLDHPITGERMVFEAP---
>UniRef50_C5RBB6(81-273:305) 23S rRNA pseudouridylate synthase RluD n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBB6_WEIPA  E=4e-19 s/c=0.50 id=37% cov=85%
---------------ILYEDENWLVVDKVAGVTSVPGKAD--RETTMVNRVKGYLISEGaedlvphvVTRLDRFTSGVALLAKHRFAHGLLDKQLQTHTVDKRYYAIVDGIVPDDHGFIDAP-IGRMDNDFIRREVRADGRPSQTEYWVVNRMPNQTL-VKVQLHTGRTHQIRVHFKYIGHPLIGDEIYGGPMDRGIE-RQALHAYWLEFYDP--------------
>UniRef50_A6NVX8(81-283:299) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX8_9BACE  E=5e-19 s/c=0.48 id=37% cov=88%
---------------ILYQDRDLIAIDKPAGLLTVGHEGERQRTAyrLLADTLRDGSREKKlfvVHRLDRDTSGAVLFARNEEMKRALQEDWDSLVKERIYLAVTVGAPEREEGVVR-----SWLRETSTRVVYSGGpgsgaKEAVTRYKVLARSGEYAlVRVALD--TGRKNQIRVHMADLGCPVAGDKKYG--DGSGPMDRLALHAVRLTITDPRTGAPLTVTAP---
>UniRef50_C6CW89(95-296:322) Pseudouridine synthase n=2 Tax=Bacteria RepID=C6CW89_PAESJ   E=5e-19 s/c=0.48 id=34% cov=89%
-------------LTILHEDEHVIVASKEAGLLTIASDKETDMTAyrqLMAYVRESDPKNRifIVHRLDRDTSGVLMFAKSEAVQQKLQEEWQTIVKERSYVALVEGEVKRQEG-----TISSWLKETKTLRMYSSPHPNDGQHAVTHYKLLQAGKVFslveVHLETGRKNQIRVHMQDIGHPIAGDKKYGS--TTKPIGRLGLHARVLAFEHPVTGKLLKF------
>UniRef50_C8PVB8(138-365:380) Pseudouridine synthase n=2 Tax=Moraxellaceae RepID=C8PVB8_9GAMM   E=5e-19 s/c=0.42 id=35% cov=94%
--------PENIPLDILYEDEAVLVINKPVGLVVHPGAGNGSGTLVNALLfhypdSRTLPRAGLVHRIDKETSGLMVIAKDSQSQLHLINQLKDKSVYRLYQAIVLA--SAAElarhRTIDAP-IGRHPTQRTKMAVVSSGKPAVTHLEKITAISDAVSLVSVRLETGRTHQIRVHLSNLGFPLLGDPLYGAARKNAILLKTLdddqkhivqqfqrqaLHAYELGFIHPKTGEPIKVQA----
>UniRef50_Q0AFD5(119-335:354) Pseudouridine synthase n=3 Tax=Nitrosomonas RepID=Q0AFD5_NITEC   E=5e-19 s/c=0.45 id=35% cov=92%
----------------LYQDDYLLVINKPAGTAVHGGSGISYGVIEQLRKQRpDWKFLELVHRLDRETSGVLLLARKRQTLLELHKQIREGTVRKHYLTLVRGKWKNSLQNVRLPLYKYLTAEGERRVAIATGRndhdKVQQAYTLFALQKNWEAFSLLDAelKTGRTHQIRVHLAHLGFPIAGDDKYGdfglnrqlqkDDGSGLVLKRMFLHASVFVCTHPVTGELLRLEAP---
>UniRef50_A0L8J2(101-311:328) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8J2_MAGSM  E=5e-19 s/c=0.46 id=36% cov=91%
----------------LHRDGWILVLNKPAGIPVHGGSGHQWGvvDAVRASLEKlgIEAQAELCHRLDKETSGLLLFGLRPRAVRLLTEAMRENQVTKTYLTLVQGVPAARQGVINQPLSkGNVRGGERMVVVEQGGQRAVTHYRVLrSYGVASLLEVQLE--TGRTHQIRVHMQWLGHPVAGDGKYGDKafnkwmRERGL-KRLFLHASELAFRHPENEQKLAYQAPLD-
>UniRef50_C1SM47(83-288:302) Pseudouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM47_9BACT  E=6e-19 s/c=0.47 id=31% cov=90%
---------------IIYDCDEFAVINKPAGITVhpAPGHAD---DTIVNAMLAEFDITDDndlrpgiVHRLDKDTSGLMIVAKNRKSREVLSKVFADRDIDKRYLAVCWGKPKELEFTIEQPIGRHYKDR-KRMCVREDGRYSKSGVRVLK-QNNNAFLAEIRIFTGRTHQIRVHMSHAGFPLAGDVVYGHRQSLKLpIKRQALHSFRLAFVSPFTGEDMVFESP---
>UniRef50_Q3YSF8(93-292:308) Pseudouridine synthase n=5 Tax=canis group RepID=Q3YSF8_EHRCJ   E=6e-19 s/c=0.48 id=36% cov=87%
---------------ILYEDDDVLIINKPAG-VSVQGgtKVRISISDILDKI-RDGESMRIVHRLDKDTSGILMLARNARASRLIMHEFKNRRVEKKYLALTQGIPKNDVGEINHSIT------KKKHNFYEnigTGnsifQEAITSFFVLKKLPYDIGLLELKPKTGRKHQIRIHLSHIGCSIIGDKKYGKFCNHVLNDHLQLHAHFLSID---IGNkKLSFTAP---
>UniRef50_Q6MGX8(64-301:319) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGX8_BDEBA  E=7e-19 s/c=0.40 id=39% cov=93%
--------PFDLKLDVLFEDEDLIVINKPAGLVVHPAaghahdtlvnALIHHTDDLSMKFGEERPGI--VHRLDKETSGIIVIAKNDKAHESLTSQFKERSTHRIYYAVCLGTARTLSGSVRSFLARHPVDRKRYASVLGDdrkpltdpnddpglGKWAVTHFEVLQRKS-GMSYLKLKLETGRTHQIRVHMSESGLPIAGDTLYGadrkikSIEARATQedlrtlPRFLLHAAELGFTHPRTKERMFF------
>UniRef50_Q2GGY1(96-319:337) Pseudouridine synthase n=13 Tax=Rickettsiales RepID=Q2GGY1_EHRCR   E=7e-19 s/c=0.43 id=31% cov=92%
-------------ISVVYEDHDIIIINKAPGITVHPGA-GTNNNTLVNALVAHYGNSLShvgkatrpgiIHRLDKDTSGLMVIAKNEKSYYFLSDLLLKKQIKKEYLAVVWGLPNPKSNTIK-NYICVKPNNKQMMTVThlpHKGKLAITEYQTQKSFSNIASLIKCRIHTGRTHQIRVHMSYIGNSIIGDQKYGKNNSKSVKyakqstiintlKRQALHAYKLGFTHPTSNTYIEFHS----
>UniRef50_Q2S3B7(74-325:349) Pseudouridine synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3B7_SALRD  E=9e-19 s/c=0.38 id=39% cov=92%
-------------LDVVHEGDDLLVVNKPAGMVVHPApghrsgtlvhallhhvdggevaaddeRDEVSEDEVGLSLVNALPQSPDhpvvrpgiVHRLDKGTSGLLVVAKRGRAHQPLAEQFKAHTVDRRYRAIVWGRFAPSDGTIEGAIGRDPHHRQRMAVVPEDeGKWARTHYETVETHA-HTSVVEFELETGRTHQIRVHARAQGHPLLGDPKYGGQRVRygtqsgtrrtfydqlfETLPHPALHAYRLGFDHPTTEERLRFEA----
>UniRef50_Q2GKG0(78-273:297) Pseudouridine synthase n=4 Tax=Anaplasma RepID=Q2GKG0_ANAPZ   E=9e-19 s/c=0.49 id=34% cov=88%
---------------IIYKDENIIAINKPAGVNVQGG--TKVSISLSDLLNKIIPgeQLHIVHRLDRDTSGVLIIARGQSIARILSEELRFRRVRKEYIAVTKGVPAFSKGEITMPIYC-----KKQSGVGETLIPkeAKTVFSVLQ-SSKRHAVMLLSPVTGRKHQLRIHLSQFCCPIIGDTKYSKDTEVQQHNSLHLHA--FRTSFQLFDREIVIKAPV--
>UniRef50_P43930(5-183:224) Uncharacterized RNA pseudouridine synthase HI0042 n=15 Tax=Gammaproteobacteria RepID=Y042_HAEIN  E=1e-18 s/c=0.53 id=37% cov=81%
---------------VVYQHSDFIIINKSEG-ISVHKDQEEQGLTELVAKQLNVPKVWLVHRLDKVTSGLLILALNAESAAEFSRLFSEHKIHKTYLALSNQKPKKKQGLI----IGDMKKarEGAWKLCQTKDNPAITRFESVS-CEPNLRLFILKPQTGKTHQLRVAMKSLGSPILGDGLYGKNTEK--IDRTYLHATQL-------------------
>UniRef50_B0PDX0(76-279:292) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX0_9FIRM  E=1e-18 s/c=0.47 id=37% cov=90%
--------PCEIPVEILYEDSDVIVYNKPAAMACHPVR-GLRQGTLANVFARDCaANGEScacrlVGRLDRDTSGAVVIAKNARAAAVLTGHV-----EKQYIALVTGMPNPKHGVIDAPI--GQPDRKNpRRMIVANGKPAVTEYETqIRCEGYSVVHCVLR--TGRTHQIRVHMASIGCPLLGDTLYGGETER--IERQALHCMQASFIHPVDKRLCIVHAP---
>UniRef50_Q03WF6(90-288:312) Pseudouridine synthase n=9 Tax=Firmicutes RepID=Q03WF6_LEUMM   E=1e-18 s/c=0.48 id=35% cov=86%
------------------------VVNKPQGMVVHPAAGHSSGTLVnallhhspLSTINGEF-RPGIVHRIDRDTSGLLMVAKNDKAHRSLSEQLKSHKNQRVYYALVRGEFTEDSGTIEAPIGRHKIDRKKQAVI-EGGREAVTHFRVLKrYVGYTLLKVSLE--TGRTHQIRVHMSYIGHPVVGDPVYGTAQ-KLDGTQLngqLLHAKTLTLEQPTTGDELSFDSP---
>UniRef50_Q2Q0E2(79-281:294) Putative RNA pseudouridylate synthase n=1 Tax=uncultured organism HF10_3D09 RepID=Q2Q0E2_9ZZZZ  E=1e-18 s/c=0.47 id=38% cov=89%
-------------LDIIFEDDAILVVEKPAGLLSVaTDRLE--VDTLHNRCVEYCRELKKkawcfiVHRLDKATSGLMVFAKTEDVKRDLQEQFAERLVHRHYVALVEGVAEPGQAiqhLVEDRNLRVFVSDKKTK----TSKHAITTWDILEKGDESTLLSVVIE-TGRRHQIRVAMAENGTPVMGDTMHGA--TTNLHGRICLHAVALEFLHPLTDDPIRFES----
>UniRef50_Q7PQ70(43-257:300) AGAP004401-PA n=4 Tax=Culicidae RepID=Q7PQ70_ANOGA   E=1e-18 s/c=0.44 id=38% cov=83%
----NYKKKDET-VDVLYTSGNFLVINKKHDLLINSN--DTKKKTVQTIMRKQFPEYVQdnlthdfyfAHRLDFATSGILCIPLNKNACKEVCQVFEEQRARKYYLALLRGHTDFDEEVIDIAIgedvrfkdtskkmctiledeLCQNPRRSITKVLvldrgYYNGKPV--------------TKVLLRPITGRRHQLRLHCSQIGHVIVGDYTY-SLKIDTSPPRMFLHAFRLVL-----------------
>UniRef50_A6CF60(74-304:317) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF60_9PLAN  E=2e-18 s/c=0.41 id=38% cov=95%
-----YDPEPLP-LEVLYEDAWLIIVNKPPGMIAHPaGNIL--SGTVANALQyyldqqtgvRSLLRPGIVHRLDQFTSGILIVAKEHLGHRSLSIQFQQNRVSKSYLAIVRDQPK-QDLFENNDAIGEHPT--QAGVCMTThpealrAKAAFTRFEVVERLPGHSL-IRAFPKTGRLHQIRVHLADLGFPIIADDFYGNDarllDDRELISRQALHAEQIEFSHPVTSLRMNISAgvPADF
>UniRef50_Q2NIN6(73-287:306) Pseudouridine synthase n=4 Tax=Candidatus Phytoplasma RepID=Q2NIN6_AYWBP  E=2e-18 s/c=0.44 id=34% cov=94%
----NLQTPQNLNLDIIYEDPYLAVINKPANLVVHPSLSFQkttlvngllHQFNTLSHIDTQRPGI--VHRLDKNTTGLLIVAKTNDVSDKLQIAFQQRKITKIYWALIEGFLED-KGIIKLPIGRNNHNRLKMQVMPD-GKTAVTHFKTLQrFSHFSLMECNLE--TGRTHQLRAHFSFLKHPIVGDLLYDS--SHHITPLgQFLHSKILKFNHPITNQNLILEAP---
>UniRef50_C6VRD0(80-283:300) Pseudouridylate synthase n=4 Tax=Lactobacillus RepID=C6VRD0_LACPJ   E=2e-18 s/c=0.46 id=36% cov=90%
---------------ILYEDRDYLIVNKPAGVASVPA--HALPDNTLANRVKGYYQAahydnEVVHittRLDRDTSGIVLFAKHHFAHSIIDHQLKAHAMRKMYLAVVSGELTTDHGWLDAP-IGRAADSFIKRTTRPDGKPSLTEYWVVKRLCNMTV-VRVRLHTGRTHQIRVHFAASGHPLIGDALYGGPRDPWIQ-RQALHCMRLEFDDPFISQTLTTFAP---
>UniRef50_D0MHX3(7-213:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=2e-18 s/c=0.46 id=39% cov=90%
-------------LPVLYLDNHLLVINKPSGLRSqgdrsgAPTVLSLGKALIKERFNKpGNVYLGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERTVEKVYLALVEGELEGSGTWEDFIA----PARDHMRLVPEDhpfGKRAVLHWQAL-MTRNGLTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRA--RRWLAPgQMALHAWKLALTHPTRRERMQWTAP---
>UniRef50_Q03PR9(76-284:294) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03PR9_LACBA  E=2e-18 s/c=0.45 id=38% cov=91%
-------------ITVLFENRDWLVVDKPAGLNVVPGP-ANRTDTLVNRI-KGYWEAEHAEnlvphiltRLDRFTSGVVWVARHRLANSLASQLQAAHQIDKRYLAVVSGRLEADHAVIDAPLASD-PTGYNQMVS-PTGKPARTEYWVQQRFATATV-VAVKLHTGRTHQIRAHFASLGHPLLGDALYDGPVTGIN--RQALQALSLTFKDPFTDEQRQFTSelPADW
>UniRef50_B9XBT8(23-208:260) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XBT8_9BACT  E=2e-18 s/c=0.51 id=35% cov=82%
----------EKLFDVVHEDAELLVINKPAGLVCHPTKGDEYS-SLISRV-RLHLGPEShphlVNRLDRETSGIVIVAKDDTTARGLRRIWEGREVQKEYLAIVHGHVREEQGTIQAALGKDTSSIIAIKdTVVEGGAASQTDFTVKKrFSREEGDFTLLRvlPHTGRKHQIRIHLAHIDHPIVGDKMYGGDEDLYMA-----------------------------
>UniRef50_C8PSH6(8-226:240) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSH6_9SPIO  E=2e-18 s/c=0.43 id=39% cov=91%
---------REEKLDILYEDPSLIVINKPSGLLSVPyqGSSVRTAADILERIMRSkgayskHHRPFAVHRLDRDTSGVMLFALNERTKDEFMRSWHTLVTERIYRAVA---ENPAEggladsGIIDAPLAYNAYNRAfvptAEKHAHFDTVAARTRYKIIERGAAYTL-FELSLDTGKKNQIRAHLAANGYPIAGD-----PIGHARTDpfgRLALHARSLAFTHPVTRKVMRFEVP---
>UniRef50_C0EHV8(82-284:299) Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHV8_9CLOT  E=2e-18 s/c=0.47 id=38% cov=89%
---------------IAYEDDDLLLVNKPAGtpVHPSPGHYE---DSLANYSAWQYAQRREqlvfrpVNRLDRGTSGLLCVAKNAHAQARLSQQLHTGAFERIYYAVVCGAPSPAAGTIDLP-IGRTPGSVLKRRVDPQGARAVTHYETVRV---NGAYTLLKIRleTGRTHQIRVHFAHLGCPLFGDFLYGT-ERRDVVEGHALHSGEIRLLHPISGEEIRCSVP---
>UniRef50_Q8DBG5(2-224:245) tRNA pseudouridine synthase C n=54 Tax=Gammaproteobacteria RepID=TRUC_VIBVU  E=2e-18 s/c=0.42 id=35% cov=94%
-------------LEIVYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQigQHVFPLHRLDRPTSGVLVFALSSEVASQVMPMFAGQEMSKTYHAIVRGWIEEEGELdyalkVELDKIADkFASQEKEAqdaiTLYKPLAKVEVPYSTSKFPTTRYGLMELKPKTGRKHQLRRHMAHLRHPIVGDTTHGDGKHNKLfreefdAPRLLLHASELRFVHPYTQQEVVIRAEVD-
>UniRef50_Q3AD19(79-281:301) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD19_CARHZ  E=3e-18 s/c=0.47 id=32% cov=89%
---------------VLYEDDYLIVIDKPAGVLAHP--VKNHFAPSMQELTLSYYRDKGrifegfypIYRLDRNTSGPMLIAKFSLIAEMLNNSLRKRQINKIYLALIEGPLADKSGIINLPLGLLEGSIIKRAVV-PGGQPACTKYQTVKAFPTHTLLKV-ELLTGRTHQIRAHFAAIGHPLAGDDLYGG--KMDLIERQALHLYYISFPHPITKKTISLYAP---
>UniRef50_Q3A3D8(67-275:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=3e-18 s/c=0.45 id=36% cov=91%
---------------ILLRDRYLVVVNKPPGINSqpTPARYKGTLYEALLRLLDDpynkgrKPSLGMVQRLDRDTSGVMIFSIHARAHKSLSDIFAARRVQKHYLALVAGCMQAPQGEFR-SLLARQHRTNLMKSVARGGKEAVTRYRVIEKFGDAELLEVEIP-TGRSHQIRVHFAEAGHPLLGDIRYGGPDRwRGVdVPRQMLHARRLELLHPISKEPLNIEAP---
>UniRef50_A6VXE8(3-223:242) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VXE8_MARMS   E=3e-18 s/c=0.43 id=35% cov=92%
-------------LDILFQDEHLVAVNKPAGLLVHRTNLaKDEEDAVVQRLRDQTGKwVFPVHRLDRGTSGVLVMAFSPEVARRLSTQFAESKTQKTYHCLVRGYCNES-GVINYPLakLNEQKGRSRFKIegterEAETGFTRLIQYQlpvpVSRYDSMRLSWLEVTPKQGRKHQIRRHFKHHLNPLVGDSCYGCRHINKVAKelwsedfRLMLHASSLEFNHPITNQPITLKA----
>UniRef50_B7G0C6(1-216:216) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0C6_PHATR  E=3e-18 s/c=0.44 id=36% cov=86%
---------------VIYSDLYLAIIDKPQGMAVQGGENQTLGRSDLLlplalkpGTKVPWPTQNSIldsaltkprvcHRLDAGTGGILVLAKTRVAEVKLKQCFADRACRKRYRALLYGKLPKQEGTIEASL---------------SGKPAETHYSVLRYVRSLDfgwlTLIDLRPVTGRKHQLRRHMQGMGHAIYGDQRYGpklepRPNEGSEDPhsRLCLWAMEIALPHPSTGEYKTFTLPS--
>UniRef50_C2W5F3(80-290:307) Pseudouridine synthase n=4 Tax=Bacillus RepID=C2W5F3_BACCE   E=3e-18 s/c=0.45 id=33% cov=92%
--------PEYGDLEVIFEDDHVLIVNKPAHMDTHP----SNKGGTGTlanlvafhlQMQGVETKVRHIHRLDKDTTGGVVFAKHGIAGVIMDRLLMERNIKRTYLALVEGKVRKKQGIIDEAIGRDRHHATRRRVS-QKGDRAVTHYKIEKYfKKQDVTLVTLQLETGRTHQIRVHMSHSGHPLIGDVLYGG-QATYM-PYQALHAMRIHFLHPITKEEITVEAP---
>UniRef50_C7RGL6(70-282:305) Pseudouridine synthase, RluA family n=3 Tax=Anaerococcus RepID=C7RGL6_ANAPD  E=3e-18 s/c=0.44 id=33% cov=93%
---------EDMELKIVYENDDYAIIDKDSNVIVhpagkiitgtlVNGLLGRYGYDGLSHIGGD-DRPGIVHRLDKDTTGLIAITKTNEAYKYFKKMFETRKVDKYYYAIVFGNFDKKKGTIDNFMDRDVHNRRKMAVR-NTGRRAVSHYEVIS-EVEGFSLVRIKIETGRTHQIRVHMTHINHPILGDPVYGNVKHKFNLDHQLLHCGKVGFKNME-GDYVTYEA----
>UniRef50_Q73K15(8-218:244) RNA pseudouridylate synthase family protein n=1 Tax=Treponema denticola RepID=Q73K15_TREDE  E=3e-18 s/c=0.45 id=36% cov=85%
---------------ILYEDKDILIVNKNAGLLVGADRWDSEAprlDKILEELYKDKGERKIypVHRLDKETSGLIIYALNAEAHKTLNDDFQNRKIEKIYHAVSAGIPQEENFKAEEKLRIDGDKLHRTVIDEKKGKESLTEFSLLK----RFSRFCLleaRPITGRTHQIRAHLKHLGLPILCDNLYGNGepvyisalkknwrgdkyEERPIISRLALHAHSLKFFHP--------------
>UniRef50_Q5Z8P2(135-413:445) RNA pseudourine synthase 2, chloroplastic n=6 Tax=Magnoliophyta RepID=PUS2_ORYSJ  E=4e-18 s/c=0.34 id=37% cov=95%
--------PEDIPLDIVYEDDHLLVVNKPAHMVVhpAPGNangtlvnaiLHHCKISTFTCLARNSIDDECpdssdddidvfdidqfttgevssevrealvrpgiVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPGSGhryaRHAASRYKVREvFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSllrPRTpsryhcdlsnmiskidrpCLHAALLGFKHPHSGKILEFSCP---
>UniRef50_Q7UQ77(31-239:256) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodopirellula baltica RepID=Q7UQ77_RHOBA  E=4e-18 s/c=0.45 id=39% cov=90%
---------------VIYEDNHLLVVNKPTKLATMGAAGQPTLHSLgCDYIRRTCNKPNKVYlgivsRLDSMTSGVIVMARTSKAASRLTPQFANHSgdgAKKTYLAVVSGRVEQQQGtLVDDVYKDDAAHR--MRVAHHSrsdAKEARLEYEVLGCDRELTL-LMVKPLTGRKHQIRLQWAEVGFPILGDTKYGSE--RSWPTGIALHSWRLSIMHPTKKERMTFEAP---
>UniRef50_C7NFK5(73-273:316) Pseudouridine synthase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NFK5_KYTSD  E=4e-18 s/c=0.47 id=43% cov=80%
-----YRPyPTEPevpgGLPVLQADEHCVVVDKPPFLATIP-RGVHVQQTVVARVREDFPEAVPVHRLDRLTSGVLLCARTPEARRPLQQLFEKRQVAKTYEALVSLPPEEAAGAFSVSPGVEGlglaerveraigeqehhlvKKRGSQQVVVVPGPPnALTRIEVVEVdEATGRARLRLFPHTGRTHQLRVQLAHLGLPIVGDPLY--------------------------------------
>UniRef50_C6D874(114-307:332) Pseudouridine synthase, RluA family n=2 Tax=Paenibacillus RepID=C6D874_PAESJ  E=5e-18 s/c=0.48 id=36% cov=86%
---------------VLYEDDFSLVLNKPAGMpvheshSGQTGTLDEAAARWLLE-QGDPLPVRHIHRLDDDTSGPVLYSKNDLAQWVLDEAMREKRIDRRYLAVVQGKVKKSSGTVNAPIGKDRHHSSRRRVT-PGGDLAITHYETIRAFSDATL-VRLQLETGRTHQIRVHMSHLGHPLLGDKLYGG-DTRLLQHQ-ALHGERLLFPHPWTG-----------
>UniRef50_D0J9U5(87-317:344) Pseudouridine synthase n=2 Tax=Blattabacterium RepID=D0J9U5_BLASP   E=5e-18 s/c=0.40 id=33% cov=93%
-------------LNILYEDEDILVINKAAGMVVHPGFGNE-KGTLIHGIKYHFKNNHQlyrlglVHRIDKDTTGLLVLAKNEYAQKYLFQQFISKTIQRKYLALVWGNIQKQEGTIS-GFIGRDPNNRKRMTLFQRNfyrsRYSVTHYKVLERFKYLTY-VSCNLETGKTHQIRVHFKYLGHPLFNDSTYGGdkifmkkylskksidffKDSLNLLKRQALHAGSLSFIHPKNRKChFTCSIPEDF
>UniRef50_C0X7U3(80-285:297) Pseudouridine synthase n=21 Tax=Enterococcus faecalis RepID=C0X7U3_ENTFA  E=5e-18 s/c=0.45 id=35% cov=90%
---------------IVFEDDHFLVVNKPAGIASIPAQY--HPSGTMANRVKGYYKRQNyvnqvihvVTRLDRDTSGLMLFAKHGFAHALIDQELREKKVTKIYYALVGGaiEQLNEHQLIEKPIGRDLSSLLKRQVI-ETGQFASTEYWLAKRGA-QAAAVRIQLHTGRTHQIRVHFEAIGCSLLGDEMYHGKMDQGI-ERQALHCMELIFTHPFTKETVHLISP---
>UniRef50_Q3JQ55(245-458:477) Pseudouridine synthase n=170 Tax=cellular organisms RepID=Q3JQ55_BURP1  E=6e-18 s/c=0.44 id=38% cov=91%
---------------ILFEDDAIIVLNKPAGVAVHGGSGVAF--GVIEQMRHARPHAkflELAHRLDRETSGILMLAKKRSALVGLHEQIRENRMDKRYFACVHGDWAADWGrrrVVKAPLFkYATPDGERRVRVQEDGLPSHTVFNLVDRWPD-YALVEAELKTGRTHQIRVHLAHLGLPIVGDAKYGDfalnkALARANAvpsiKRMFLHAHRLRLAHPLTGEPLQFDAP---
>UniRef50_B5JL25(8-231:249) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL25_9BACT  E=6e-18 s/c=0.41 id=36% cov=94%
-------PTPQPPLEILYRDERLVAIHKPSGLLVHRSPIDRRETRFAIQLLRDqigqhvYP----AHRIDRPTSGILLFGLDEAAGTALSLLFQNREIQKNYLAVTRGH-LPESGLIDSPLhkyeDADGHIKSSETQEAETAyrRLATTElpYPTERYDTTRYSLVELTPHTGRRHQIRRHLAHIRHPIIGDVRHGCNKANKLArshfaiHRLLLAATHVVFVHPFTNAPLKIHCP---
>UniRef50_B0VJ94(84-315:351) Pseudouridine synthase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ94_9BACT  E=6e-18 s/c=0.40 id=33% cov=95%
--------PQDIPLDVVYEDEYLAIINKKAGMIVHPGFGNPEGtlvNAILYRFGENLSSGKEfnrpgiVHRLDRGTSGLIIIAKNDLTHAKLSDMFARREIKKTYFAITTGIPEPEKGEIETYLARSNKN-PRTICVTNEGRYALTHYKTIK-TWHYFALVEINPATGRMHQIRVHFAHIRYPILGDLLYNSRRyVQSLVPqnmkkkvtellvnhlrRQALHSWKLEFFHPITGYPISVSAP---
>UniRef50_B6BTN1(84-307:346) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=B6BTN1_9PROT  E=8e-18 s/c=0.41 id=36% cov=93%
-------------LDIVYEDDDILVLNKPYNLVVHPGSGNANGTLLngLLYYNKDlekLPRGGIVHRLDKDTTGLMVVAKNEESQNNLISQLQSKSVYREYRAIVWGQIWQNK-VIQKPIGRHPRQRTKMAVTKVNGKDAETKLEILErFNYHTYVRCLLK--TGRTHQIRVHMLDNNSPIVGDKDYGLKKiipTKNMEMDLLksiknfdrqaLHAIALGLIHPKTNKEMkwTIDLPED-
>UniRef50_C5RCG6(77-287:297) Pseudouridine synthase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCG6_WEIPA  E=8e-18 s/c=0.44 id=32% cov=95%
-----YVPDDSQSLQVLYENDELMVVNKRKGVKThpnSPGENGTMMNFAQAYLMKQDKRAYMVHRLDGQTTGALIIAKVPYVVPILNQMLHDKTIKRTYLAWVDGHLTDSTGAITLA-IGDHPTNSRlRQIDGANAKPAITHWTKIKSVYQQTL-VRLQLETGRTHQIRLHMAAIGHPLVGDDLYN--QQSAYADGLLLHSASVQLPMPFSSEIKSIGAP---
>UniRef50_A3Y8C6(100-293:322) Pseudouridine synthase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8C6_9GAMM  E=8e-18 s/c=0.48 id=36% cov=84%
---------------IVYEDAGLMVVNKPSGLAVHGGSgLNFGLVEVVRQLRSKEKSIELVHRLDRDTSGLIMISKKRSVLKQLHAALREKEGvQKTYQALVYGSWPKRKQQVNAPLLKNELKSGERIVKVHTeGKESLTRFKLLR-QFEGYSLVECEPVTGRTHQIRVHTLHAGYPIVGDDKYSpseqNKEAKGLGfKRLCLHAAKL-------------------
>UniRef50_D1B0V0(73-291:302) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0V0_SULD5  E=8e-18 s/c=0.42 id=38% cov=84%
----------------IFETEDFAVFDKPSGVMIHPRKRSDGytlNDEIKSLYGKD---ANAAHRIDKSTSGLVLVGKHKQSEIALKEIFATRKVQKSYIALVKGHLKE-ELLIDEKLKRDVeTSQIRLKVhVDERGKPSQTKVIPLHYFEDKDATLVQAfPYTGRQHQIRVHLFHVKHPIVGDMIYGVEEEDAeryldgsmsaeeqyektLSSRLLLHAYSLSFN----------------
>UniRef50_Q1N5G6(9-220:236) Pseudouridine synthase n=1 Tax=Bermanella marisrubri RepID=Q1N5G6_9GAMM  E=8e-18 s/c=0.44 id=37% cov=88%
---------------ILYQDDDLIAINKPSGLLVHKSWVAKDAKEFALQIVRDMSGKHVfpVHRLDRPTSGVLLFGFSGEIAQQVQAQWEQANKTYWAVVRGW---LKEQTLVDHALkgMADY----GQDV--EIVQEAQTHFkpidyveidaEIDRYPKSRFSWVEAKPKQGRTHQIRRHLKHLSHPIIGDARYGKGKYNRYitehydCPRLLLHHQQLEMTHPVSGSKLMITAP---
>UniRef50_C9LQW6(60-277:305) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQW6_9FIRM  E=9e-18 s/c=0.42 id=36% cov=82%
-------------FTIVYEDEHILIADKKAGLLcmdstgkttrTLIGEVNEY------LADKGEPSAYMVHRIDFNTSGLMVIAKDEESKGILDRMIKERELEKVYLCIVSGVPKKKEGHLIHYLFKD----SKQGKVFlsdvpqKGAKSAVTDYHIVK-TGQNLSLLECTLLTGRTHQIRSQMAYIGHPLIGDDKYGSKEVnrRYGEKGQLLHAWKITF-----------------
>UniRef50_B0G9B7(26-243:249) Pseudouridine synthase n=2 Tax=Clostridiales RepID=B0G9B7_9FIRM   E=9e-18 s/c=0.42 id=36% cov=90%
---------------ILYEDTQILVCVKPAGVatqskrIGSPDMVSLLKNHIsMTSGKSGEPYLAVIHRLDQPVSGILVFAKTPAAAKDLNRQLTTSGFGKHYYALVAGTPEPTSADLENFLVKDARTN-TSRICQKgtaDAKLAKLHYDLVDttFFADiassipvATSQLKIKLDTGRHHQIRVQLSGMGCPIIGDTKYNpdSPKLTARRTPLCLCAYQLEFRHPVTKKAMTF------
>UniRef50_C8S0A2(94-341:356) Pseudouridine synthase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0A2_9RHOB  E=9e-18 s/c=0.37 id=38% cov=95%
--------PEDIPLTVVWEDADLIVVDKPVGMVVHPApgsytgtlvnALLHHCGDTLSGVG-GAKRPGIVHRIDKDTSGLLVVAKTDRAHHGLAAQFEAHSVTRHYIALVHGAPNAADprlrgirGVSFEPggIVCIATNlarhktdRQRQAVLFDSGRHAVTRVRVLEsYGTPPVAALVECWLeTGRTHQIRVHMSHAGHALLGDQTYggrrkvapkAVGEAVAQAandfPRQALHAASLGFVHPVSGEELLFTSP---
>UniRef50_B0TGQ0(107-321:369) Pseudouridine synthase n=44 Tax=Bacteria RepID=B0TGQ0_HELMI   E=9e-18 s/c=0.43 id=34% cov=94%
--------PEDIPLEIIFQDADIAVINKPAGLVVHPA--EGHWSGTLVNALLYHIKDLSgingelrpgiVHRIDKDTSGLLVVAKNDRAHIHLTEQVKDHRVRREYLAVVHGVIGAETGRVEAPIGRDPKDRQRMAVI-AGGKSAITHFRVLaRYPEQGFSLLHCRLETGRTHQIRVHLAHIGHPVAGDPKYGPRKAAFGLTGQALHAWKLEFVHPRSGEPMRFQA----
>UniRef50_B8GBL0(79-294:307) Pseudouridine synthase n=3 Tax=Chloroflexus RepID=B8GBL0_CHLAD   E=1e-17 s/c=0.43 id=39% cov=85%
---------------IIYEDDDLLVINKPpacytgdtpwdtqGSVLAVARRLLTERDGLV-------PTLHLAHQLDAGTSGILVISKHPRANAPLQAAFNHGQVDKRYLALCAGHPPTATELItghGRAAAGRWrlyeqaeigkvlPN--GQRV-----KRAHTQIELRRQYGD-VALVWAKPLTGRTHQIRLHLVALGCPLLGDERYGGPTTVAgmLIPHPLLHAAELALPHPRSGRLLNIFCP---
>UniRef50_B1XXM0(119-338:369) Pseudouridine synthase n=6 Tax=Burkholderiales RepID=B1XXM0_LEPCP   E=1e-17 s/c=0.42 id=35% cov=90%
-------------LAVVHEDAHLLVIDKPAGLVVHPA--AGHWSGTLLNgllahhaAAAHLPRAGIVHRLDKDTSGLMLVAKSLQAHTALVRAIAARDVKREYLALVHGAVMDGLQVIDAPLGRDPVSRVRMAIV-ASGKPARTDVRrlaVAELPGDGvrqlpgatraprqVSAVHCQLHTGRTHQIRVHLASRGHPLLADAMYGGAPAFGL-QRQALHAARLHLLHPIDGRPLAFE-----
>UniRef50_A5GW76(80-299:316) Pseudouridine synthase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GW76_SYNR3  E=1e-17 s/c=0.42 id=33% cov=96%
-----YLQPEPMDLDVLFEDEHLIVINKPAGLTvhPAPGNKDGTLVNGLLHHCPDLPGISGklrpgiVHRLDKDTTGCIVIAKSQQALVKLQVQIQKRVASREYLAVVHGVPAGESGTIVGAIGRHPVDRKKYAVVsSDNGRYACTHWSLQERLGDYSL-LRFKLDTGRTHQIRVHCAHRNHPVVGDPTYSRCRKLPIElPGQALHAVQLGLDHPITGERMVFEAP---
>UniRef50_A5ZQM9(86-322:334) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM9_9FIRM  E=1e-17 s/c=0.39 id=36% cov=94%
-------------LCILYEDEDILAVNKPAGVLTHPAGM-HYSDSLANQVAAYFQERNLsvcirpIGRLDKETSGIVLFAKNQVAAQRLQEQRETGVLEKQYLALVDGNlPKDQDDIwhtIDFPIkkIGNHPLRMEavkksssaenekyiahQLTDYINCFQAVTHYHVL-YSTDKWSAIKLKLDTGRTHQIRVHMQAIGHPLLGDSIYNTStmnREQCTIYRAALHAWKVRLRQPFNGRKIELEVPVpeDF
>UniRef50_Q01UA0(83-294:304) Pseudouridine synthase n=8 Tax=Bacteria RepID=Q01UA0_SOLUE   E=1e-17 s/c=0.43 id=37% cov=88%
---------------VLFEDPHLLAVNKPSGLPTLPGGgfLE---NTLLRLVQKHTPNANPVHRLGRATSGIVLFARTPQAASNLFANWNTPKIRKIYRAlaqNIAQHDAyeilTPIGLVPHPRIGSvWAANP-------SGKPSKSLAKVISRSTSTTTfEVSLN--SGRPHQIRIHLASIGHPLVGDPLYGlTGQPLENLPGLpgdggyFLHAQFLQFQHPITGEQINLEAalPSGF
>UniRef50_A7ZGA9(72-295:307) Pseudouridine synthase n=4 Tax=Campylobacter RepID=A7ZGA9_CAMC1   E=1e-17 s/c=0.41 id=39% cov=90%
----------------IFECESFAVFDKPSGVLSHPnGRHCEYslNDEIYTLFGRD---ASVAHRLDCETSGVIVVGKDRNSTIKLKKIFENREVFKSYVAMVQG-KIEREFTIDAKM--DLANnyddvKMRMQIC-ENGKSAVTKILPIKYFDDiDTTLVRAIPLTGRQHQIRLHLFHVKHKILGEPLYglSRPQIEKIldkemsererinltdAKRLLLHSDEISFKFDEifYKIKSKFDAESEF
>UniRef50_A5WCP4(147-361:364) Pseudouridine synthase n=15 Tax=Moraxellaceae RepID=A5WCP4_PSYWF   E=1e-17 s/c=0.43 id=37% cov=89%
---------------VVYEDEGLIVLNKPSGMAVHGGSgldfgvIEAMRDATSKKY------LELVHRIDKDTSGLLMIAKKRSTLKVLQEYLREKTIQKHYLCLVKGQPALNEFEIDAPLlrytVANGERRVKVDKANPEAKLSQTTCKVLARFKMNGEPVSLieaMPHTGRTHQIRVHLAYLGHPILGDDKYNIKDTSGVR-RLCLHAWQLDV--PEYEvikaplpEDMQSLLPADF
>UniRef50_Q11Q54(17-228:242) Pseudouridine synthase n=7 Tax=Bacteria RepID=Q11Q54_CYTH3   E=2e-17 s/c=0.43 id=29% cov=90%
----------EHFFTVVFEDNHLIAVNKKNGVL-VQG--DDTGDKPLSELVKEYLKkkynkpgnvfAGVIHRIDRPVSGLVLLAKTSKALERMNKQFADKKIQKAYLMVSGSKPNPASA-----KLVHWLTKDAKRNIAKahTSEVKESKYCELSYslltSSDRYFLIEVKPVTGRSHQIRCQMASIGCVIKGDLKYGAPRSNPDGG-ICLHSHKLSFQHPVTGDNMQLKA----
>UniRef50_A9IIW7(99-307:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=2e-17 s/c=0.44 id=35% cov=89%
---------------VVAESPDWIVVDKPAGLVTHPG-AGNWSGTLLNGLLHRYPElarvarAGIVHRLDKDTSGLMVVARNELAQTHLVRQLQARSMGREYIALAHGW-LPVAGKVDRPIGRD----ARVPVRMSVERPIAPKPAITHYAPLRRGRAPDGPVtevacrleTGRTHQIRVHLASLGHPLLADTLYGG-RLTAGATRQMLHARALHFDDPGGGGPAAFRA----
>UniRef50_B8FTI5(83-286:302) Pseudouridine synthase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTI5_DESHD  E=2e-17 s/c=0.45 id=35% cov=90%
-------------LEILYEDDYFIAINKPAGQVVHP--TPRYPRGTIGNAVVGYWLAKGearpfrpIHRIDRNTSGVVVIGKNQFAHQQMAWQHAHGRIHKCYRGIVEGQVMEDQGTIKAP-IALAPDSFIQRQISPEGSPAVTLYKVLErYQDASLLEFILE--TGRTHQIRVHCQHLGHPLLGDDLYGGNLARIN--RQALHSSIYEFNHPLTGELTTIQAP---
>UniRef50_Q63E77(74-290:307) Pseudouridine synthase n=73 Tax=Bacillaceae RepID=Q63E77_BACCZ   E=2e-17 s/c=0.42 id=32% cov=96%
---EEYDvEPEYGELHVVYEDDHVLIVNKPEKMDTHPsekGGMGTLANLVAFHFQMQglETKVRHIHRLDKDTTGGVVFAKHRIAGAIMDRLLMERKIKRTYAALVEGKVKKKQGTIDAAIGRDRHHATRRRVS-PKGDQAITYYKVEEYfKKQNVTLVTLQLETGRTHQIRVHMSYNGNPLVGDVLYGG--GTKYMSRQALHAMKINFLHPITKEEIEVDVP---
>UniRef50_C7H7W3(75-292:314) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Faecalibacterium prausnitzii RepID=C7H7W3_9FIRM  E=2e-17 s/c=0.42 id=35% cov=94%
--------PQEIPLDIIYEDAHLLVVNKPKGMVVHPapgnpdGTLVNallwHCKGSLSGIGGEI-RPGIVHRVDKDTSGLLVVAKDDATHIGLSQQMAVHSVERAYNTIVYGGFAQDEGFVESNLGRSKTDRKKMAV-YPASEPhtkyAYTGYKVLERLGEFTM-LECRLKTGRTHQIRVHMASIHHPVAGDPVYGPHNCITSLHGQCLHAKTLGFIHPITGEHLRFDS----
>UniRef50_C1F7V3(104-341:355) Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7V3_ACIC5  E=2e-17 s/c=0.38 id=35% cov=92%
-------------LDIIYEDKDLIVVNKPAGMMVHAG--SGATDSARNRgtlvnalLGRQEKLSKTggdlrpgiVHRLDKETSGLIIVARNDAAHQRLAEMFSQREIHKTYLALVHGHIAEDRGTINAAIARDvIRRTRMTTRRTEGARTAISHYRVqrrIETRWGKFTLVSVRIETGRTHQIRVHLSSIGHPVVGDTHYGAPTTIVLpvanrarrkqlpapeglsLPRNFLHAAELKFPHPRSEKPLHLEAP---
>UniRef50_Q0VQN9(98-303:317) Pseudouridine synthase n=2 Tax=Alcanivorax RepID=Q0VQN9_ALCBS   E=2e-17 s/c=0.44 id=34% cov=90%
----------------VYEDDQLFVFNKPAGLAVHGG--SGVSLGLIEALRVMFPQErelELVHRLDRDTSGLIMVARRRSFLRKLQRLMQGGQIEKRYWLLCQGFKGK-ERTLDAPLLKMMNGNERIVRVSREGKPSVTHFRLLErFAQAQLVEATLE--TGRTHQIRVHSQFGGFALLGDSKYGIAKGEALLAeigrrRLCLHARTLVFVHPNTGKRLTVTAPLD-
>UniRef50_UPI00015B45C3(19-224:272) PREDICTED: similar to conserved hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B45C3  E=2e-17 s/c=0.44 id=38% cov=85%
------------YIEILHQSDNFLIVNKPYDM--VINSNNPSVKSVQLIIREMFPNLVNpnlyhefyfVHRLDYATSGVMCLALNKQSAQAASSAFEERTVRKYYLALVHGHIDKYSMVIDIPIGHDVRElNGNRKMCtkdddfCEKARKSCTALLVLEkgYIDDRpVTKVLLYPKTGRRHQLRVHCAHIGHIIVGDYTY-SGKTDTKPHRTFLHAFRL-------------------
>UniRef50_Q0A8Q9(100-304:327) Pseudouridine synthase n=4 Tax=Ectothiorhodospiraceae RepID=Q0A8Q9_ALHEH  E=3e-17 s/c=0.44 id=37% cov=91%
---------------ILYEDDRLLVIDKPSGLAVHGGSgLAWGLIEVLRQARPSAPFLELVHRLDRATSGCLMVAKRRSALRELHEQLRTGAVHKRYLALLTGALGRGPIPVEAPL--ERRSGPAGGVRVAShGKLARTVFRAVARPGGMTL-AEADIATGRTHQIRVHAAHLGMPIAGDDRYGeravNRRLRGLGlKRLFLHAHRLELSAPGTGQPLSIEAP---
>UniRef50_Q1PXB6(69-260:274) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXB6_9BACT  E=3e-17 s/c=0.47 id=33% cov=86%
--------PEKKTYDILFNDDCYVIVSKPPGIVT-NGQNSIERD-LRTQFNRDRIQA--VHRLDKDTSGALIFAKNENAFEEMKKVFKKHDIQKIYRVIVTGKICEPAFTINSPV---------------GGQTAVTHITLLK-KGKNTSYLEVATETGRRHQIRIHLASIGHPVIGETEYARKEIENIlhreAKRQMLHAHRISFVHPYTKKEISVTAP---
>UniRef50_B0SGK3(85-285:312) Pseudouridylate synthase, 23S RNA-specific n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SGK3_LEPBA  E=3e-17 s/c=0.45 id=36% cov=85%
---------------VLYDEDEFMVIHKKAGIAChsgpgddspslVNGLLYQFKNLSGTGGER---RPGIVHRLDKPTEGVLIIAKTDRAHAALSKLFQDRLVEKTYYAWVLQAPVEAEGTINMP-IGRHPVERVKMCVREDGRMAITHYKTEKIVQTQTGRkfslMKLGLETGRTHQIRVHMAKVGCPVVGDSLYSRSAKDYTQYGLLLFAKKLDFPHP--------------
>UniRef50_D1PYC1(86-301:306) Ribosomal large subunit pseudouridine synthase D n=8 Tax=Prevotella RepID=D1PYC1_9BACT  E=3e-17 s/c=0.42 id=35% cov=91%
------------YVKIVYEDAYIIVVEKNVGILSMPA--GHHSLNVKAVLDEYFhktkqpCQAHVVHRLDRDTSGLMIYAKDKKTEFSLQADWKGTVYDRRYVAVVSGVMEQDEGTID-----SWLKDNKSYFSYSSSTDNGGKYAVTHfYTLDRSpqhSLVEFKLDTGRKNQIRVHAADMGHPVCGDPKYGNGDDP--IGRLCLHAYVLCFYHPVTHEPMEFQAriPQNF
>UniRef50_B7GQ28(77-278:320) Pseudouridine synthase, RluA family n=21 Tax=Bifidobacteriaceae RepID=B7GQ28_BIFLI  E=3e-17 s/c=0.45 id=38% cov=82%
---------------VVYEDDDVIVVDKPVGVAahasvgwtgpTVLGSLRDRGVHIAS-----YGAAGRegiVSRLDVGTSGLMLVCKSDLAYTEMRRQFAEHEVKKTYHALVQGGLKENKATIEAPIgrakVSDF------RFCVTpAGKPAVTHWDVLERFGHEATLVSVNLETGRTHQIRVHFSSIGHPLCGDPMYGAnpvlSEALGL-DRQWLHAMKLEFRHP--------------
>UniRef50_UPI00016C4782(56-264:275) RNA pseudouridylate synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4782  E=4e-17 s/c=0.43 id=36% cov=93%
-------PPSASGLEIVHEDAHLVVIDKPSGLLTVATE-SEKLDTAFVRLS-DYLRARNagrpfvVHRLDRDTSGLLLFA--RSAEVRDQLQGNWEELTKTYLAVVEGRPESSEGGVENYLTEGRDLRVRASpRPGPDGKRAASRYTVRQTRGGYSL-VEVEIETGRKHQIRVHLAGLGCPVAGDKMYGATTDPVR--RLGLHAWRLSFDHPFTLERLELEAP---
>UniRef50_A1AT77(74-265:310) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=A1AT77_PELPD  E=4e-17 s/c=0.47 id=37% cov=85%
---------ERPGLDILYEDDQIAIVNKPSGL--AMHRTAEQETNLVEQGTafmawRGTPcKLYPVNRLDRGTSGAVILAKSSTAAGIFGRQVKETGLDKLYLALVAGRPDGA-GVIDAPL---------------DGKECRTDYRLLAQGC-GFSLLELLPFSGRMHQIRRHLEMIGHPILGDQRYSGRVVEELAG-FALHSFRTGLTMPD-GRRLVVCAP---
>UniRef50_Q1D114(79-291:306) Pseudouridine synthase, RluA family n=6 Tax=Cystobacterineae RepID=Q1D114_MYXXD  E=4e-17 s/c=0.42 id=37% cov=92%
-----------PVLPVLHDDSALVIVNKPPGIVVEP---EGRAASVVGLLAAQRPpfdveglaQPGVVHRLDRETSGCLAFARTDTAAAALLRSFQEKRVDKRYWTLVLGQP-PAQGRLEGPYARDPADPRRFTTRVPSARRAALSFEVRERFAD-AALLEVDLDTGRTHQVRVQLSEAGFPVLADSLYGPPEARAHAAaralgRQALHAFTLELPSPATGQPVRVEAP---
>UniRef50_C0WQT7(87-288:302) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=C0WQT7_LACBU   E=5e-17 s/c=0.45 id=34% cov=90%
-------------LKILYEDANLIVINKRRGNKThpnQPGEVGATINHLAAYLKTKEALPYMVHRLDQETSGAILFAKNPAVVPTLVAKIATKNIKRTYLAWVVGTDIDSQGIIDFPIGLD-PND-KRKRMIDGNHPAKsiTHYTVLQ-KEDGYSLLAVQLETGRTHQIRVHLTAIGHPLVGDPLY-NPDDK--HPFLLLHSWKLNIPLPFSEQVIEITAP---
>UniRef50_C2L1H2(77-323:335) Pseudouridine synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2L1H2_9FIRM  E=5e-17 s/c=0.36 id=31% cov=98%
MEEENSAPPYDFPLDIVYEDRDILLLDKPARLPChpSPGHFEKTLAGAIVFYQMQNSSASSfvchfIHRLDLDTSGLILLAKNRLAASVLNKDMKEGRIQRSYLAFCQGNPEFSLGeiqgftrleekkkkefnyafAISAPIARVEEEKMLRTVNFQKGQEALSYFNVLNYFPEkNYSLLQLQLATGRTHQIRVHLSYLSCPLLGDSLYGNGEESVFSqniglSRQALHSYSISFTHPIRKEKMFFQ-----
>UniRef50_B6G997(7-216:227) Pseudouridine synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G997_9ACTN  E=5e-17 s/c=0.43 id=36% cov=88%
-------------LRVLYRDPWLMAVDKPAGIIV-------HGDGTGAPTLTDAVRAHLVasgeasasaaaqalQRLDRDTTGIVLFSLDKEAQPAFDRMIAERSIQKRYLAIVHGR-FPAAKTMCQPLGRDRHDSRRMRVS-RTGKPAHTDAKRIAYAkadarAPERSLLAIDLHTGRKHQIRVHLAHAKFPLLGDSLYGGPSCSGG---LMLHASELSFTHPITGAPTHIQAP---
>UniRef50_A4J9H9(97-310:320) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A4J9H9_DESRM   E=5e-17 s/c=0.42 id=34% cov=93%
--------PEKGAIEVLYEDDFLLVLNKPAHQLVHPtgqttrGTMANYLAYYLK--QRNVVSAiRPVHRLDRETSGCVIFAKDSRSQFILEQQLKERTLKRTYWALVKGIVHPPSGTIDAP-IGPHPSLANRRAINEHGEQSITHYQTLR-SFPEISLLKLNLDTGRTHQIRLHLAHLGYPIIGDRMYGvrSPWINRQA----LHAYDVSFRHLKENHEIAVHAplPTDF
>UniRef50_D1B058(77-284:326) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B058_SULD5  E=5e-17 s/c=0.43 id=32% cov=90%
---------------VLYEDEDILVINKPP-FLTVHGapsvkeptlvDWLQHRGISLSTISGEERHG-IVHRIDKETSGALVIAKNNEAHVKLASQLEDKSMGRYYLA-IIDLPLKENVVVDLP-IGRNPNHRLKMAVQREGRSAKSAFCKCSLSHDGKKELIaAKLFTGRTHQIRVHLSALSRHILGDSLYGFKSHNGTIPRVMLHAYILYLKHPRSQEMLYIHAP---
>UniRef50_B3E6K8(68-267:300) Pseudouridine synthase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6K8_GEOLS  E=5e-17 s/c=0.45 id=34% cov=89%
--LELLNRPLPP-IDLLWQDDRLLAINKPAGLAMHPaAEVDENLADIASawlEKKANYPvRAYPVNRLDRGTSGVVLLATSSSNAGILGRQVKEEGLDKIYLTVVEGM---LEGIGEISQPLD-------------GKESISRYRSLS-VGESCSFLLVEPVTGRTHQIRRHLSAIGHPVLGDKRYDA-QPLATLPGIALHSFRTRLQHPTPETRLTLCAP---
>UniRef50_D2RJC8(77-278:294) Pseudouridine synthase, RluA family n=2 Tax=Veillonellaceae RepID=D2RJC8_ACIFE  E=6e-17 s/c=0.44 id=37% cov=86%
-------------LSLLYEDEDLLVVDKPAGMLIHP-TWSGARDTLVQAVGgyfRRTGQHCGIHplyRLDRDTTGVLMVAKSAFAKHALTRD--HSQIYREYLAVCEGRWGIPQGRIEHPIgrvaegVDRWTVRPD-------GRPAVTEYRILE---ENQEWTVLKIhlLTGRTHQIRVHFAHEGHPLVGDPLYGTKDGR--IARQALHAWTVRFRHPRTGEEILLTAP---
>UniRef50_A4BJ00(4-231:249) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ00_9GAMM  E=6e-17 s/c=0.39 id=38% cov=93%
-------------LNIVYEDDVLLVVDKPSGLLMHPSWLDRREtDTLAGRAkaylaqQSEGAKVHTVHRLDRPTSGLVVMCKDDHAAKALVEQFQEKTVNKRYWAICRGFAPVAETL-DYPLIEE-HDRIADKFA-DSDKPAQeaiTEFRrlgitelaipVSRYPKMRLSWMECVPVTGRKHQIRRHLKHLRYPILGDTRHGcrhlnrAVEGSFGELFMGLRAVEMSFQHPVTNELMTFNVGAD-
>UniRef50_B6J6C4(78-305:327) Pseudouridine synthase n=7 Tax=Coxiella burnetii RepID=B6J6C4_COXB1   E=6e-17 s/c=0.39 id=34% cov=94%
--------PNERWvpqpipLDVIYEDETLLVINKPVGLIVHPGAGVRDQTLINALLHYDpslsvVPRAGIIHRLDKDTSGLLLIARTLASHHALIKAMKARQIVREYEAIVKGVLISGRT-IEAP-VGRHPIHRTRMAVVEFGRPAITHFRIIKrYRAHTHIRVQLE--TGRTHQIRVHMAHIHHPLAGDPVYGShvgipvhlsdplQTALKTLKRQALHGATLQFSHPVDQRPMACHAP---
>UniRef50_A1ALH6(77-279:306) Pseudouridine synthase, RluA family n=9 Tax=Desulfuromonadales RepID=A1ALH6_PELPD  E=6e-17 s/c=0.44 id=35% cov=91%
--------PQE---ALLHEDDDLIALNKPAGVNTqrTPYQLKgtlEYWASEYFRRQGNPEPARVIHRLDRGTSGVMLFPKHKRAAAWLSKRFHDGQVEKRYLALVSGTPGQIEWRVDGPI---GKIASARYGIVAGGRSALTEFRLLAESC-GYALVEAKPLTGRTHQIRVHLQSCGLPIVGDGTYGGEP----AARMMLHCASLRFADGG-GREIVVEAPLD-
>UniRef50_A4S1L0(12-235:243) Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S1L0_OSTLU  E=7e-17 s/c=0.40 id=38% cov=93%
-------------LDVVFENDEFLVVNKPPNLRFHPNHRFE-GNSLLSRAlhHMDGATPYIVHRLDMDTSGVAVFVKKQHLVANVAGQFQEKTAKKTYLAVSVGVVPPDCGdsfIVDAPIGDHGIVQEARTVDFSGeGKDARTTCEIIARAtppAAVAALVRVTPLTGRTHQIRVHLAHAGLPIVSDALYG-PHLRwkpyddwggALSIrRQALHAFNLELKHPETGESLTFQAkmPSD-
>UniRef50_D0L1K7(110-324:346) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1K7_HALNC  E=7e-17 s/c=0.42 id=39% cov=90%
--------------MIVYEDEALLAVNKPAGLAvhggsNIPFGLIE----LMRQHTGLGEKLELAHRIDRDTSGLLILAKTRATLHSLQTQFRpEGHAEKQYLAIVHGHWPDKLKRVDAPLEKWQGEGESHRVQVNpQGKEAVTHFAVL--AANKNATLLRAQLeTGRTHQIRVHTAHENHPIVGDEKYGQrewdkrlfPSTGASArrrPPLLLHAYRLMLTHPQTEQPLQLTAP---
>UniRef50_B8E0R4(74-292:303) Pseudouridine synthase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0R4_DICTD  E=7e-17 s/c=0.41 id=30% cov=95%
--------PQDIPIEIVYEDEDMVIINKPKGMVVHPAH-GHYNDTLVNALLYRVKDLSGiggelrpgiIHRLDKDTTGLLIIAKNDLSHQKLSEQLKNRTLRRTYWALCEGEIPWEEKRIEAPIGRHPINRKKMAIV-PYGKIAITNFKVLERFKGYTL-ISADLETGRTHQIRVHISHLGFPIVGDEVYGRIDKKFGVKGQLLHAKKVSFIHPTKGIPMEFEIdlPEEF
>UniRef50_Q89AD9(81-296:317) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RLUD_BUCBP  E=7e-17 s/c=0.41 id=33% cov=89%
---------ENIFLNVIYEDDDILVINKQDNFVVHPGAGNTsgtllnallHRDSTFFNI----PRAGIVHRLDKDTTGLMVIAKNNLSYMALIDQIKCKKVIREYQAIVYGKVISGGTIV--KSIIRNPIKRTTMIVNKCGKRAITHYRILKRFTHHThLKIILE--TGRTHQIRTHMLYINFPLVGDKTYGNKfkfyknisltllEQVKKFPRQALHASRLCLYHPVTKHLM--------
>UniRef50_C0Q9S8(13-235:260) TruC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9S8_DESAH   E=9e-17 s/c=0.40 id=36% cov=94%
-------------LEILYQDEDLVAVNKPPGLLVHRTALATHETRFALQMVRDQTQGHVfpVHRLDRPTQGVLLFARNRNMATRMSHLFQTGKIQKTYLAVVRGHVKERGTIVHPLKNIKHPQDNKRINHSLKIDDAVTDYACLasvelpfyvdRYPTTRYCLVALIPKTGRRHQLRRHMKHISHPIVGDTVYGkSSHNRFFATHlnctgLLLAARELCFVHPDTGIFITITAPLD-
>UniRef50_Q3ECD0(148-413:430) RNA pseudourine synthase 2, chloroplastic n=4 Tax=Magnoliophyta RepID=PUS2_ARATH  E=1e-16 s/c=0.33 id=36% cov=93%
-------------LDIVYEDKHVLVVNKPAHMVVHPapgnptGTLVNgilhhcslpcvdysnseedddsdeetfSDDEEMTTSPSSYAASVRpgiVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAaipggVRGGRARHAASRYKVIEtFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSllqkrvsrsdqeeiielisrmDRPCLHAIVLGFTHPCTGEIVKFSCP---
>UniRef50_B5ZBC1(79-288:299) RluA n=15 Tax=Ureaplasma RepID=B5ZBC1_UREU1   E=1e-16 s/c=0.42 id=34% cov=90%
-------------LEIVFEDQDLLVINKPSGMLVHPTSFQE--QNTLANALKHYLKTDDfyiTHRLDKNTSGLIVICKNQKALCCLQQQFMQKTVKKSYYAIVHNRFDmhHLHFMINEPIGHSYQDKLRMK----TGdaknvKEAISIVKVIE-QYQNTALVEVSIITGRTHQIRVHMRHINHPIYNDPLYGI--SKHTTPyEQYLHSFYISFIHPSTNEIVEFKTlmPNEF
>UniRef50_C5ZWU1(67-275:319) Pseudouridine synthase n=2 Tax=Helicobacter canadensis MIT 98-5491 RepID=C5ZWU1_9HELI  E=1e-16 s/c=0.42 id=34% cov=88%
---------------ILYEDEDLLILNKPINLIvhqthqddsqyTLQDWLQENNFS-LSNLGDSYRQG-IIHRLDKTTSGAIVIAKNNYAHEILSQQLKSKEMGRYYVC-VIDSPLKQNILIDAPLI----RHPKNRLKYiptTKDTPLSKEAKTAFFKIINNDKIELigaKLFSGRTHQIRAHLSKIQRHILGDVFYGYKG--NYTARILLHSHLVYLTHPTTKQRLEIYAP---
>UniRef50_Q30NR3(62-294:304) Pseudouridine synthase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30NR3_SULDN  E=1e-16 s/c=0.38 id=36% cov=89%
--------------------ERFVVFDKPSGMLIHPqNRFTEY--SLIDELKAQFGmNANIAHRIDQETSGLVLCAKDKKSEVDIKMMFQERDMKKKYLAMVHGELK-EELRIDAPLLrYDDEKSALVRMVVKvdpTGKESLTFVRPLKYFpITDTTLVECSPHTGRQHQIRVHMFHMKHPIVGDPVYGQSEESVVryldrkierdervklsgAKRLLLHANELEFE--LYGKKHIIKSSVNF
>UniRef50_A4WSV2(85-332:349) Pseudouridine synthase n=41 Tax=Alphaproteobacteria RepID=A4WSV2_RHOS5  E=1e-16 s/c=0.36 id=34% cov=95%
--------PEAIPLSVVWEDADLIVIDKPVGMVVhpAPGQwtgtlvnaLLHHCGASLSGIGGEK-RPGIVHRIDKDTSGLLVVAKTDRAHQGLAAQFEAHTVERRYLALVHGVPEPSDprlrgirgvsfepgGVLRIAtgIARHRTDRQRQAVTFEGGRHAVTRARLLERFGTppAAALVECRLETGRTHQIRVHMSHVGHGLIGDQTYGGRrklSAKAVGaeaaqaaeafPRQALHAATLGFCHPVTGEDLSFESP---
>UniRef50_A9NFY2(69-254:277) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY2_ACHLI  E=1e-16 s/c=0.48 id=34% cov=81%
---------EDVELDIIYEDDDIVIVNKPFNVIVHDDGASE--DHLTRRVNMHFQyhgyhhQVLPAHRIDKETTGIVVFAKHFIALAYLSNLFESRQVVKNYICVVENKVKDKTGSIESKLIKD--SKLQKMVVSPHGKLAITHYELLGYEA-TRSRLKVQIETGRTHQIRAHMASINHPVVGDILYG-----VSSSRLLLH-----------------------
>UniRef50_A4A0R6(26-233:242) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0R6_9PLAN  E=1e-16 s/c=0.43 id=34% cov=89%
---------------VLYEDNHLLAISKPA-LLATMGAQEGEPSAAQwakDYLKRTYNKPGNVYvgivsRIDAHVTGVLLFARTSKAASRLSEQFRDRSTVKEYAALIPAGPKIRNG-----ELVDWIRKEdrlhRMVIAAEgTADADRAEMEILEQQRRpNCQMLHLRLITGRKHQIRLQLASRGAPILGDKKYGSTD--RYSPGIALHAHRLVFTHPTLKTMVTIEAP---
>UniRef50_B9KFV3(68-287:320) Pseudouridine synthase n=2 Tax=Campylobacter RepID=B9KFV3_CAMLR   E=2e-16 s/c=0.40 id=32% cov=95%
---ESYTP--EFDIEILYEDDDVLVLNKaPNIVVHGASSVKEatlvdwllHKGYTLSNLNGEH-RAGLVHRLDKGTSGAIIIAKNNQAHQFLANQLLDKSMGRFYLA-LSELPLKNDKMSNEKAIMRCPNNRLKKITTNTKNPlaknAKTDF-INLLSAKNCSLIAAKLYTGRTHQIRTHLADFNRYILGDELYGY-KGKIKYNRVMLHAYLIYFIHPRTKELMFIKAP---
>UniRef50_B0RLZ1(10-233:258) Pseudouridine synthase n=13 Tax=Xanthomonadaceae RepID=B0RLZ1_XANCB   E=2e-16 s/c=0.39 id=34% cov=93%
-------------LQILYQDAVLAVVDKPAGLMVHDSKLARGEDDFLAdrlRVQLGRP-IFLVHRLDRATSGCLLLAFDRDTASALGKALMAGEVEKDYLAICRGWPAEERFIVDHDLD-GGPGKPIKKpavTHFQRLATGELEIPSTGFATSRYALLRCQPQTGRFRQIRRHLKHLSHHMIGDTSHGDGrhnrSFRMLGiHRMLLHAERLGFPHPADGRRISVVAPLD-
>UniRef50_D0LGK2(72-283:304) Pseudouridine synthase, RluA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGK2_HALO1  E=2e-16 s/c=0.41 id=36% cov=89%
---------------IAYEDAHVVVIDKPVDVSSVP--YERRETGTAMDLLREawrklRPDAgrtplHVVHRIDKATSGLLAFAKTKRAELGLAAQFRQHTLERAYL--CVAHGAVRAQRIESRLVRDRGDGLRGSTrAPNQGKRAVTHVEVLeELARASLCQVRLE--TGKTHQIRIHLAERGHPLVGERVYKrDAEFRGHtlidAPRLMLHAATLGFAHPITGERVFVESP---
>UniRef50_A0LJK9(89-289:304) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJK9_SYNFM  E=2e-16 s/c=0.44 id=36% cov=89%
---------------ILYRDAHLLAYDKEAGVPSqqTPADAYNNLYAALIRFlageaRASAPYVALHHRLDRETSGVMVFALDRAVNRRLGESFQEKRVVKDYLAWVDGVPV-LDRWTAVEDICRKDGR--YRTCPQGrGKAARTLLRVLLRAGDR-ALIAARPVTGRTHQIRLHLAACGHPVIGDRLYGGTSGERLH----LHALRLRLPHPKHDSELVLSAP---
>UniRef50_B3T0Q8(93-303:320) Putative RNA pseudouridylate synthase n=2 Tax=prokaryotic environmental samples RepID=B3T0Q8_9ZZZZ  E=2e-16 s/c=0.42 id=35% cov=84%
---------------VIFENDSFLLVNKPSG-LAVHGGSGIHLG--LIELLRSFREKrnehlELVHRLDKDTSGCLLVSKKKSKLRKLHEYFREGKVKKTYLGLMVGKFTQTVYEIDQPLkIITTPENGRLAVPDDSGKKAKTKFFLME-KYKNSALFKIEPITGKTHQIRAHAKYMKTPLAADNRYGIQPDQIVSefglTRLFLHAE--SITFP--------------
>UniRef50_Q67N67(76-304:327) Pseudouridine synthase n=1 Tax=Symbiobacterium thermophilum RepID=Q67N67_SYMTH  E=3e-16 s/c=0.38 id=37% cov=87%
---------------VVYEDPWLLVVDKPAGMVVhpvrdyVSGTLANAVAHHLLRSGSD-PVARPVQRIDRETSGLVLFAKDPAVAGLLARELERQKLERRYvavvegavaadagtvdrpIRRVWGHPVARE-------VAEGPRTPEQERLLaeaaaqgralredwtAAGQPAVTHWRVLRRWPAATM-LELRLETGRTHQIRVHMAYLGHPLLGDELYGG--SRTLIQRQALHAATLAFVHPVTREPVRFTAP---
>UniRef50_B9ZR86(99-309:328) Pseudouridine synthase, RluA family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR86_9GAMM  E=3e-16 s/c=0.41 id=36% cov=88%
---------------ILHEDDQVLVLDKPSGLAVHGGSGLAFGIIEAMRQLRPGSELELGHRLDRETSGCLLLAKSRSGLQDFHAALREGRVEKRYLAlQVGAFPS------DQPIVCDEPiassrgpdgkrrMRAGEDADPESARSAISQFVPLErYGSFQLAEVRIG--TGRTHQIRVHGQAIGHPVGGDHDYGLPDANrvlrgAGLKRLFLHAQALQYEDSAS-ESHVYSAP---
>UniRef50_Q73NS0(80-330:345) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Treponema denticola RepID=Q73NS0_TREDE  E=3e-16 s/c=0.35 id=38% cov=95%
-----YAHPQKLPLNIIYEDENIIVVNKERGMVTHPAggnwdgtlvnalnyyRLYDSriKDEFAVELNKllsgEVKNIEKlslepyrmgiVHRLDKETSGLIITARNLKTEKLLKSFFKKRAVKKYYLAVLDGVPPKNKGRIKTSVFRSSSDRKKFSVSADlsKGKKALSAYKVLK--SDGKMSLVLFRIyTGRTHQIRLHAKFMGCPVAGDKVYGKKKtglekktglAKKTGMPLMLHAYKLII--PDTVNSKKeFKAP---
>UniRef50_C0ZH07(81-284:306) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZH07_BREBN  E=4e-16 s/c=0.43 id=33% cov=90%
-------------LSIRYEDEDLMVIAKPAGLVVHP--TGNHPSGTLAngmiaywKKRGENRKFRAVNRLDKDTSGLMIVAKNQWAHEQFSRMQQIRTLQRTYRAIVQGIVESDDGTINTP-IGLAENSFITRQVRPDGQTAVTHYRVLA-RGEGMSFVEVKLETGRTHQIRVHMSSEGHPLAGDDLYGGE--REHIGRQALHAWGLSFVHPRSGLAMSWEEP---
>UniRef50_B0K860(69-273:285) Pseudouridine synthase n=11 Tax=Thermoanaerobacterales RepID=B0K860_THEP3  E=4e-16 s/c=0.42 id=36% cov=88%
--------PEKLDLDICYEDEEILIVNKPANMVVHPTK--RYQSGTLANGVAWYFKEKGlkalirpVNRLDRGTSGLVVFA---------KRPFMQyylqiiKPMTKLYFAVVEGK-MEGEGRIDLP-ISRKPQSGIERMVSEEGDRAITNYKVVK-SSKRFSLLKVKIETGRTHQIRVHLSHIGHPIVGDTLYGSSD--DYIKRQALHAYRLTFVHPLEEKSISVYSP---
>UniRef50_Q65TD3(6-188:217) Pseudouridine synthase n=7 Tax=Pasteurellaceae RepID=Q65TD3_MANSM   E=5e-16 s/c=0.47 id=35% cov=83%
---------------IIHKHRDFIIIDKPNG-VSVHRDEAEIGLTGLLAKQLSVAQVWLVHRLDKVTSGLLILALNERSAAEFSLLFARHEISKTYLALSKQKPKKKQGLI----IGDMEKarRGAWKLCQTKQNPAVTRFESVS-CEPNLRLFILKPQTGKTHQLRVAMKSLGSPILGDELYGGNSEK--NDRTYLHAFRLEFT----------------
>UniRef50_A8ZT51(7-219:258) Pseudouridine synthase n=2 Tax=Deltaproteobacteria RepID=A8ZT51_DESOH  E=6e-16 s/c=0.41 id=34% cov=91%
--------PQWP---VLYEDNHLLALYKPAGLL-VQG--DSTGDPTLLELGRCWLKIRynkpgkvflgMVHRLDRPVAGVVLFCRTSKAAGRISAQFRDGVTAKQYVAVVEGVIPENEGRLANHIFRRGPTSHIIDVPTPKSREARLAFHVID-RTDSRTLVKIDLETGRHHQIRVQFAHLGFPVVGDLRYGAP-APLPGRQIALLARRLTVTHPTLGHALTFTS----
>UniRef50_A9KM78(4-199:237) Pseudouridine synthase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM78_CLOPH  E=6e-16 s/c=0.44 id=37% cov=82%
---------------ILFEDKHIIVCIKPIGVLSQPGQGEGMD---MITLLQEYRKNNKesdyiglVHRLDRNVGGVMVFAKTELATKKLSVAIRERNFTKEYMAVIHGRPSESSGILKDLMFKDSSknksfvvNRMRKGV-----KEASLEYrtiETIEVAKGEFSFIRVKLHTGRTHQIRVQFASRKLPLVGDGKYGGKDNQCDAA---LWSYRLAFVHP--------------
>UniRef50_A8BWX6(4-217:250) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Giardia intestinalis RepID=A8BWX6_GIALA  E=6e-16 s/c=0.40 id=38% cov=84%
---------------VVFENDDYTVINKPPNL----------------HIDGDYPQTvrswylatrgrapRFVNQLDYPTSGLMVIASSRKAAGFAGREFQARAVAKTYVALVVG--DVASQTISAPIADDAADPRQFCMCIsETGKHSETHVERIAAIPEDLrelspslpqglyTLVVLRPVTGRRHQLRLHLAHIGHPIVGDQLYGGgltdTNQCGEEERLCLHALMLSI--PNLSGLPLLEAPLEF
>UniRef50_Q54N28(430-695:718) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54N28_DICDI  E=7e-16 s/c=0.32 id=41% cov=91%
---------------VLYKDEHIIVLNKPQG-LSVQGgtGLNKHLDMMLShlRFEKD-ENPKLVHRLDRNTSGILILgrsklaasAMTKKFELKLvkenkkdkddnnnnknnknnnkndsKRLFREKEVfnnnknkdeenenyskgiKKTYWALLGSTPTPKEGRIRAPLkkvvVGGFEKVVPTLTTGDGAKIAITEYKVLESSLTKHCFISLWPETGRTHQLRVHCASvLNTPIIGDPKYGDKESDSNLKDLLpypsklhLHARRIEFIHPFTNKKIDISAP---
>UniRef50_B9L8H5(79-277:311) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L8H5_NAUPA  E=7e-16 s/c=0.43 id=34% cov=88%
---------------VLYEDEDVLVINKPPGIVVHPApSVKEATlvDWLKTKNYRLSTIAGEerfgiVHRIDKETSGALIIAKNNKAHEFLSAQLKDKTMGRYYIM-LLNEPLKEAVCVDKPIARNPKNRLKMAYV-KNGREAKTLFVPV---YENVA--AAKLFTGRTHQIRVHLSTIGRYILGDTLYGKKEQK--LPRVMLHAKELYFIHPS-GKKLSIIAP---
>UniRef50_Q6MMV3(44-265:290) Pseudouridine synthase n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MMV3_BDEBA  E=8e-16 s/c=0.39 id=40% cov=90%
-------PPGERTLVeLLYKDEYFIAVNKPSGFHVHP------HENVQHRVSRDkiclyharrmmkqhvYP----VHRLDAGTSGVLLFALSSESASKLCRLFTERATHKTYQAVVRGFVK-EEGEVQLPLELD-STGDLVDAHTSFKRLATVEFPVAVGKKFPTARyswVEVTPHTGRYHQIRRHFNRISHPLLGDAVHGDSHHNRFFRNhleiegLCLKALRLEFTHPWSGEKVSIEAP---
>UniRef50_C0N6T7(97-303:318) Pseudouridine synthase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6T7_9GAMM  E=8e-16 s/c=0.41 id=34% cov=91%
---------------IIFEDDSMLVLNKPSGLAVHAGsQIQVGVIEAFRIIKPELAFLELVHRLDRDTSGCLLLAKSRDSLLNLQQQMLSDQIDKRYLTLLKGILPNAEELVEQPLLKNTVSSGERMVkVTPDGKRAKTLF--IRQQDLSLAQLTeVKLYTGRTHQIRVHAAWTQHPVAGDDKYGDREFNKTlksfgLKRLFLHAWRLGIRHPVSGEPMQLEAP---
>UniRef50_A3DC38(11-217:231) Ribosomal large subunit pseudouridine synthase D n=9 Tax=Firmicutes RepID=A3DC38_CLOTH  E=8e-16 s/c=0.41 id=33% cov=89%
---------------IIFEDNHLLVVKKP---VNIPTQKDKSNDSdMLTLLKEDIKKRYNkpgnvylglVHRLDRPVGGVMVFAKTSKAASRLSDQVRTRQFKKVYLAVVHGILDKLEGRLENYLLKDTRNNTVSVVKEDTpgGKLAVLDYK-VEGIYNGFSLVKVSLHTGRPHQIRVQLANIGHPLYGDQKYGHGVNKP-GQQIALWSSEIAFVHPVLKQEMIFSC----
>UniRef50_A7H6D3(87-302:339) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=A7H6D3_ANADF   E=1e-15 s/c=0.40 id=36% cov=90%
---------------VLHEDADVLAVDKPAGLAAHPG--TGISGATLVEMARahlgtpaDLPPTEfkpsPAHRLDRDTSGVVLVAKNRKTMVRLTELFTDgADVKKTYLALVKGKMPREAGTIDLPL-AEHEQTARSKAARGVNlQEALTRWKVVS-AMKEASLLAVTIETGRTHQIRRHLEAVGHPVLGDRRYGDfPTNRAARQrwglrRMFLHAWRLELPHPTTGAPLRLEAP---
>UniRef50_C6XNC0(93-350:369) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNC0_HIRBI  E=1e-15 s/c=0.33 id=35% cov=95%
--------PEDIPLDVLFEDEHLIILNKPAGLVVHPAPGSTSGTLVNALLHHCAGQLPGiggvarpgiVHRLDKDTSGVMVAAKTEFAHTGLSSLFQAHFMERAYLAVTRGAPRPLLGKIETRIARSTTDRKKMAVVRESrlsasaewhgeseedyeqkGKHAITNYKVLEQFGriDATSGLPAATLtecrleTGRTHQIRVHMAHIGAPLLGDQTYGryrGLKAHGSGPafetathackefkRQALHAAILGFEHPVTGENLRFE-----
>UniRef50_A7I2U9(78-321:357) Pseudouridine synthase n=23 Tax=Campylobacterales RepID=A7I2U9_CAMHC  E=1e-15 s/c=0.35 id=34% cov=93%
-------------IEILYEDDDLLVLNKPSGVVVHPAKsvkeptLAEwlkQKKYMLSSINGD-ERAGIVHRLDKQTSGAILVAKTDFAHVKLAAQLKDKSMGRIYLA--FLDLALKENVcVDRFIARNPSNRLKKAVVPPNENGARSAKSAFLNIANDTILQNFKPLnfsqnqtnfnliaaklfTGRTHQIRVHLSSINRHIIGDFLYGFKSDFDKIKRIFLHAYLLYFTHPRTNRQILISAkiPSEF
>UniRef50_A6Q113(73-277:299) Pseudouridine synthase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q113_NITSB  E=1e-15 s/c=0.42 id=35% cov=82%
----------------IFETKDFVLYDKPSGIMVHPRNRNTHY-TLIDEIRYRYgPQANIVHRIDKETSGLVLASTNKEAEKALKQMFEHKQIQKRYLALVRGN-------IEKQLVIEEPialNRDYSKIKLKvkidpSGKYAKTIINPLKQFGSFTL-VEAIPITGRQHQIRIHLFHVKHPILGDPIYGPSTNESIryldglmdeeerlvvtgATRLMLHAYAVEFT----------------
>UniRef50_C1N7S8(37-276:360) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7S8_9CHLO  E=1e-15 s/c=0.36 id=34% cov=93%
-------------LTVLYEDEHVLAVDKPPGVMTYPAhRLR--GGSVVNRavhhlrgVTRDGSGGGagfgfgaatepiAVHRLDLETSGVLMLAKDKPSASALQGAFERREARKTYLAVCAILEDAANASDESDDDFDFERHPGHRRRERRRRAVHTRGDAGREAREhrftgkrivGTALVLARPLTGRTHQVRLHLAHAGLPIVGDALYGyddalRPASGGFEGRMALHAWNLAVKHPRTKNTMRLAVdmPAD-
>UniRef50_C3XLR7(88-314:353) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XLR7_9HELI   E=1e-15 s/c=0.38 id=34% cov=89%
---------QDLNIPIIYEDSDLLILNKPANL--IVHRIDEN-DTQFTLV--DYLKQKGfalsnlgdsyrlgiVHRLDKNTSGAIVIAKNNATHAHLSMQIKSKQMGRYYLC-IINQPLKNPQTVEIPIM----RHPKQRLKYITttnnvnAKTAKTAFFMIPTLLDSNflktenpkkeipTLIGAKLFTGRTHQIRVHLNSINRHILGDGFYGYKG--NYTGRILLHAHFLHLIHPKTQKLLEFHAP---
>UniRef50_UPI00016C3FBA(104-335:354) ribosomal large subunit pseudouridine synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3FBA  E=1e-15 s/c=0.37 id=35% cov=95%
--------PEDIPLDILYQDEWLALVNKPADMVVHPAK-GNWSGTLVNALQWHFREhlstgaghlrAGIVHRLDKDTSGVILVAKDDLTHRDLAMQFESRKVFKEYVAIAAGELERDSDYIEGALKMHPYDRLKMIVSTDpDAKHALSYYEVLERFRGFTL-VKVQPRTGRTHQIRVHLLHVGCAVLADKIYGGraqvklseiapgtppAEDEVLLGRQALHAFRLRFQHPRTGQWIEAEAP---
>UniRef50_C4ZAQ6(72-290:295) Pseudouridine synthase n=15 Tax=Clostridiales RepID=C4ZAQ6_EUBR3   E=1e-15 s/c=0.39 id=32% cov=96%
----NIAPVNLP-LDIAYEDDDIIVINKPFDMPAHPS-AGNHDNTLANALMYYYGSQNkpfvyrCINRLDRDTTGLTIVAKHALAGGILGNAVAKRAIHRTYYAVCSG-CTPACMRISAPIARKDASTIERCVDFKRGEYAVTDFIRIKYNPDNNLSLVkLRLLTGRTHQIRVHMKYIGFPLIGDFLY-NPDYTYIS-RQALHSGRLVFTHPVTGQKMNLISdiPSD-
>UniRef50_UPI0001978015(99-318:359) ribosomal pseudouridine synthase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978015  E=1e-15 s/c=0.39 id=37% cov=89%
---------------ILYEDDDILIINKPPHLvihdapsvkdLTLTQWLKLHAHTLHTLSGRE--RYGIIHRLDKQTSGVLCIAKSLLAYEILPNQLKSRQMGRYYLAII---DTPLKQ--NLQVQCFMgrcpTNRLKMSKIHidENENPPKgvrdSKSSFVKLATSNDGLLELIAIklhTGRTHQIRTHLESLSRHILGDSLYGyKPSAKSFfyEGRILLHAYILYLAHPKNGQNHTFKAP---
>UniRef50_A5IZB6(76-276:305) Pseudouridine synthase n=4 Tax=Mycoplasma RepID=A5IZB6_MYCAP   E=1e-15 s/c=0.42 id=32% cov=87%
-------------LDIRYEDEYLLILNKPSGLVVhpAPGHLNDTlVNALMYHFKNNLSDANGllrlgiVHRIDKDTSGLLIIAKDNETHNELAKMLKNHQIKRTYLAICEGILPNKTTKINLPIQRDTKNRKLMSI-HKDGKSSVTYVHMLKsFYIDNKPYSLVKCelETGRTHQIRVHLAYIKHPVYGDSIYGKS-VDEFNQR--LHAYKLSFMHPV-------------
>UniRef50_Q041R0(87-281:285) Pseudouridylate synthase, 23S RNA-specific n=28 Tax=Lactobacillus RepID=Q041R0_LACGA  E=1e-15 s/c=0.44 id=35% cov=89%
---------------VVYEDSDILVIDKPTGQKTHPN-LDE-KDTALNDCATYLGYSPFiVHRLDMLTNGLLLVAKNPAVVPILNRQLTNKTLHREYLAWVSkSNQLKQSGTISLSIGHD-PDDQRKRMVRLDGQKAITHYEVIK-ECENKELVKLTLETGRTHQIRVHLAALGAPIIGDPLY-NPNYQN-GEKLQLTAYQLTFMGPFKFESKTVK-----
>UniRef50_B8CQ92(25-239:278) Pseudouridine synthase n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ92_SHEPW  E=1e-15 s/c=0.40 id=35% cov=90%
-----------PHIEILFEDDDVVAIHKPAGLLVHRSYLARRERFFAMQLTRDKVGCHVfpVHRLDRPTSGILLFAKSSEMANALCEQFAAHSIDKEYLAIVRGNMHEAATLdyalkEELDDVADKdvdPNKAAQDaiTSYKPLLNSEIPYASGRYATSRYALVHLSPHTGRKHQLRRHMAHLRHPILGDTTHGDGKQNKFfrehfgINRLWLIAKKLSFNHPRTG-----------
>UniRef50_C7LP91(11-217:245) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP91_DESBD  E=2e-15 s/c=0.41 id=35% cov=88%
---------------VLHRDEHLIAVHKPAGLL-VHRNAHAGREPFLLQILRDqlgqrlYP----VHRLDRPTSGLMIMALSPQAAHALALQFASQEVHKTYLAVTRGF-VPPQGLIDDALKSESGSLQEARTEFTRLATAEIPHPVGPNPTARYSMVRVRPRTGRTHQIRRHFAHIRHPLIGDvlrgdgrqnRFFRDHFG---LHRLLLASVELTFRHPEDTSPMTLTCP---
>UniRef50_Q6MA84(5-215:219) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MA84_PARUW  E=2e-15 s/c=0.40 id=34% cov=91%
-------------ISIVYEDNHLFVLNKPAGLLTQPSgtahdSLESQAKAYLKIVYQKPGNVflEAVHRLDKPVSGIVVFGKTSKALTRLNASVRAKQTKKIYYAWVDSVPVDEQKTLENFLIHNDFQAQVVSSKHPQAKLAKLTYRVIERKSVG-ALLEIKLETGRYHQIRAQLAHLGCPIRGDIRYGSqypftPHAIA------LHHESLEISHPIHQETMLFQTALPF
>UniRef50_A1U2H1(5-223:245) Pseudouridine synthase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2H1_MARAV  E=2e-15 s/c=0.39 id=36% cov=91%
-------------LTEIYRDDWLLAVHKPAGLLVHRSPIDKHETEFALQYARAMNGGEHvypVHRLDRPTSGVLLFARDPETARALGLAMMAGAVSKTYLAMVRGW-APEQGVIDHPLREEPEDRrlkgqeqPVREALTRYRRLATTELPVAieRYPTSRYSLVELKPETGRKHQLRRHMKHINHPIIGDanhgrgrhnRYFAE---RFGQGRLMLAATELRLRHPVTDEPLCLKA----
>UniRef50_C8NY78(102-322:339) Pseudouridine synthase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NY78_9CORY  E=3e-15 s/c=0.38 id=38% cov=91%
--------PRVPFeVTVVYEDDAIMVVNKPPFLATMP-RASHITESATVRLRRSTGNEEltPAHRLDRMTSGLLLFTKKASVRGAYQQLFASRAVAKLYeaVADDIGPSLPARPSANSPLV--W----EHHIVKREGELASSITvdaipNSLTYVTDITplqggaARYLLQPVTGRTHQLRVQMHAAGAPIHGDPVY--PEllpasAEDFTNPMLLTAVGLAFTDPLTGVKRTFSAP---
>UniRef50_C6LAK4(57-264:272) Ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAK4_9FIRM  E=3e-15 s/c=0.40 id=35% cov=92%
---------------IIYEDKQLLVCRKPAGLAvqnASFGRMDLEsmvRNYLMEKSGKPNPYLGVVHRLDQPVQGLLVFAKTPAAAAALSAQVQDGRMTKEYLAVVCGKLPEKEGELVHFLKKEPAGNCSRAVGEKTpgAKRAELSYRVLA-EADGRALVRIKLKTGRHHQIRVQMVACGAPLYGDAKY-NPGAQ-RGERLALCADRLSFVHPAGGKRVEFTCRPD-
>UniRef50_UPI0001C353AC(7-217:239) putative pseudouridylate synthase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353AC  E=4e-15 s/c=0.40 id=34% cov=90%
---------------ILYEDDQIIVVEKPAGIESQSSRtfepdmvseVKKHINSLSPK--KGDPYVGVIHRLDKPVGGILVFGKTKEAAGALSKQISEHQTEKRYLAVVCGKPVENFGTYVDYLWKDGKNNISKIVdkGITDAKRAELSYRVLAELEGEGGPLCLMEIdlkTGRHHQIRVQLSGHGTPLLGDLKYNPDGPKVTGQRnVALCAWKLSFTHPGNKKRMKF------
>UniRef50_Q49WX8(76-278:305) Pseudouridine synthase n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49WX8_STAS1  E=4e-15 s/c=0.41 id=33% cov=88%
--------PENLNLDIYYEDDDVAIVYKPKGMVVHPsaghytgtlvnGLMYQMKN--LSGINGEI-RPGIVHRIDKDTSGLLMVAKNDVAHRSLVDQLVNKTVTRKYVALVHGKIPHDYGTVDAPIGRNKNDRQSMDVV-DDGKEAVTHFNVLEHFNKYTL-IECQLETGRTHQIRVHMKYIGYPLVGDPKYGPKKTLDIGGQ-ALHAGIIGFEHPV-------------
>UniRef50_Q5LC96(78-293:305) Pseudouridine synthase n=29 Tax=Bacteroides RepID=Q5LC96_BACFN   E=4e-15 s/c=0.39 id=33% cov=93%
---------RHPLLKIVYEDAYIIVVEKKEGLLSVG--TERQKERTAQHILSEYVGRSGrgnriyvVHRLDRDTSGLMMFAKDEKTQYTLRDHWHDIVTDRRYVAVVTGEMEKDSDTV-VSWLTDRTLYVSSSSYDDGGSKSITHYRTIK-RANGYSLVELRLETGRKNQIRVHMQDLGHPLIGDGRYGIDGGPNPLGRLALHAFKLCFYHPVTDQLMEFETP---
>UniRef50_B0TDX6(83-301:339) Pseudouridine synthase, rlua family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDX6_HELMI  E=4e-15 s/c=0.38 id=31% cov=91%
-------------LKVLYEDADLLILDKPPGIeVHPPEQRARFRPTLAHGVAHYFAEkgikarVRPLHRLDKDTTGICVFAKNAFAHQALDRQLRNGSLQRGYLAILRGLPAELVGVIDAPIGRD-PEHHMRRMVRDDGERAITRYRVTQViepsglemkgAAESEGHWALAEVileTGRTHQIRVHFRHLGTPLLGDRLYGGDSPR--IDRQALHSAWVTLLQPRSGEAVKVTA----
>UniRef50_A0QT71(89-284:291) Pseudouridine synthase n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QT71_MYCS2  E=5e-15 s/c=0.43 id=37% cov=85%
---------------VLYRDDDIVVVDKPHFLATMP-RGGHVTQTALVRLRRelDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPK-----IALPATLRSrivKHRGRLQAFEEPGEPNAETY--VEAVGDGLYR--LTPRTGRTHQLRVHMASIGLPITGDPFY--PTVIDVAPGdfsrpLQLLAKRLMFDDPVSGARREF------
>UniRef50_A9DVX4(4-210:224) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A9DVX4_9FLAO   E=5e-15 s/c=0.40 id=33% cov=91%
-------------LEIIHENKDYIVVNKASGLISekSPYEAVTVEDQVFQHIlkSKRKPYVGIIHRLDRVTSGVLILAKKKSILVAFNKLFSSRKVQKTYLAIVKNKPTKSKGNLVNFLIKN-NKEKKAEIVTTKSKEAQScmlSYEVI--GKNNIGYLLaVKPKTGRFHQIRAQLANIGLPIVGDSKYGS-DVSYKSLSICLHAWKLTFEDVETKEQKTFEA----
>UniRef50_C7RHE5(67-257:277) Pseudouridine synthase n=3 Tax=Anaerococcus RepID=C7RHE5_ANAPD   E=5e-15 s/c=0.44 id=32% cov=84%
-------EPKKGGINIVYEDDNSLVISKEAN-ITVNSKNQISLSNYIANYFIDSGQESKirlVNRLDMDTSGLMLIAKNKYSHAYYQKQLEENTMKKKYLAVV-------EGMLDIDSL--YENKfsyNEKKKNYEpsdKGKISRTYFKSIRINCDFSI-IECEILTGRTHQIRASLTDLGHPIWGDKLYGSDKN---LDRFLLHSYRLEFT----------------
>UniRef50_A0L7F8(15-204:255) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=A0L7F8_MAGSM   E=5e-15 s/c=0.44 id=35% cov=84%
----------------LYRDGLLLIINKPAGIpvHAGPGG-GANLEALFGGLRFGLPKAPALaHRLDRDTSGCLVLGRHAKALSKLGKLFSQGKVQKTYWAVVQGGPPQAQGSMDFPLykISTAQQGWRMVVDPEQGKSSLTLYRVLGRSATHS-WLELTPKTGRTHQIRVHCAHVGLPIEGDLQYGAAPSE---PQLTLHLHARQIILP--------------
>UniRef50_A6G5N3(94-297:322) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N3_9DELT  E=5e-15 s/c=0.41 id=37% cov=84%
---------------------------KPAGLLSVPWDDRDDRDTLIERTRITLREREGtrsgerdrlgvVQRLDKDTSGLLVFARTRRARKALEAQFRAHTIFRRYVALV--HGAAKAGVHESYLIADrgdglrgsWRGKSPPKAA----KKAITKVR-VEEKLDGATLISCQLETGRQHQIRIHLAEAGHPLVGEPVYGRGyrGRRLPAPRPMLHAASLGFRHPVGDRPVRFEAP---
>UniRef50_D2R7R1(8-219:245) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7R1_9PLAN  E=5e-15 s/c=0.39 id=36% cov=89%
---------------ILLEDSAVLVVNKPAGILT---QAPLGIDSLEWQIKRYLQSTEKSevpylgvpHRLDRPVSGCICFAKNQKAARKISQQFEARLVQKTYWALVSGivHPTRSTWVDHLKKL---DGEPRTIVVDErdpEGKNAILHYELLE-TREGRSLLAITLETGRTHQIRVQCGSRGFPLLGDRLYGSAEpfgplaADERDQLIALHARTLAFRHPVTKEDLIFTA----
>UniRef50_C7MES4(103-305:318) Pseudouridine synthase, RluA family n=5 Tax=Actinomycetales RepID=C7MES4_BRAFD  E=6e-15 s/c=0.41 id=33% cov=87%
----------------LHEDEDLLIIDKPAGVavhrgTDVPAGVID----ALRQLRPELPDLELIHRLDRSTSGVLALAKSPSMLRYLHDLLRDREDeiERRYLALVAGHWPAETTILDAPL-----RREENRVVVDpDGQRAETHVAVAQRFGNRATLLEVRLLTGRKHQIRVHLQHAGHPIAGDDRYGDDafnrrAASLGGTGLHLHAAELVIPRPD-GTTLAVTAP---
>UniRef50_Q0BWH2(81-323:341) Pseudouridine synthase n=3 Tax=Alphaproteobacteria RepID=Q0BWH2_HYPNA  E=6e-15 s/c=0.34 id=35% cov=93%
-------------LEILFEDAHLVILNKAAGMAVHPAPGSQTGTLVNALLHHCQGQLSGiggverpgiVHRLDKLTSGVMVAAKTESAHTGLAALFERHDIDRVYRAVTRGAPRPLSGTIEAAIARSESDRKKMSVHRNPDSPAArhavTHYKAVETFGykDRATRLPAAALlecrleTGRTHQIRVHMAHSGAPLIGDPVYGrqagimawkapGSEARydkALAaarafSRQALHAAVLGFVHPITGETLRYEAP---
>UniRef50_Q2BH25(13-192:238) Pseudouridine synthase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH25_9GAMM  E=6e-15 s/c=0.46 id=35% cov=82%
---------------ILTQTADFIIINKSPG-ISVHKDQGDEGLTMLLQRQLELDEIFLIHRLDKVTSGVMVFAKNRETAADLSMQFQNREVEKFYLAVSANKPKRKQGLVCGDM--EKSRRGSWKLLRSKINPAMTQF--VSVAMKPGFRLfLLKPSTGKTHQIRVALKSEGAPILGDNMYGGEE----ADRTYLHAYQLAFT----------------
>UniRef50_D2R6S8(2-216:230) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6S8_9PLAN  E=6e-15 s/c=0.39 id=40% cov=90%
--------PRTPSLDILHEDNHLLVINKRP-LLATQG-VAEGTPSLVTEVQQylkvKYKKPGNVYvgvvsRLDAHTSGVVVLARTSKAASRLAEQFREQGVEKTYWAAVEAAPEPASGELVSWVVKDDKNR---RMTIADRKLAGCQKAVLTYETleqnKSAALVSVKLETGRKHQIRLQLAdELSLPVIGDRKYGSriefPEGIA------LHARELAFDHPVGGKRLSFVAP---
>UniRef50_Q7MA82(81-292:308) Pseudouridine synthase n=1 Tax=Wolinella succinogenes RepID=Q7MA82_WOLSU  E=7e-15 s/c=0.39 id=38% cov=86%
--------------------------DKPADLLVHPKGTFEHY-SLMDEVRLRFGQeADLAHRIDKETSGIVLITRSKKEGAILKINFFNREVKKCYWALVRG-KMEGERILDFPLKAQ-SKRLDLGVrmrVDEKGKSSLTQIKALDYEAlSDTTLVEASPLTGRTHQIRLHLAHAGYPILGDPLYGTSDelSRAYleqamdqeerrrcfgASRLMLHAQGLGF--PYKGSWYEIVSGQDF
>UniRef50_D1B8F2(87-281:302) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8F2_THEAS  E=7e-15 s/c=0.42 id=38% cov=81%
---------------VIHWDRRLLVANKPAGWICQPggGRGTSLPEEVWRLLGVDRGPVPS-HRLDVNTTGVVLVPLDGALGRELHRLFREGTIRKLYWALVRGT-CVGEALVDLPLSKD----GRGNVTpSPSGQPARSVVRPLAVRGGFSL-VEVELLTGRQHQARVHLAHLGLPILGDVRYGV-RFRGVG-RTMLHARRV-------------------
>UniRef50_UPI0001C37137(95-296:338) ribosomal large subunit pseudouridine synthase D n=1 Tax=Chlamydia muridarum Nigg RepID=UPI0001C37137  E=7e-15 s/c=0.41 id=38% cov=84%
----------------VYEDNMILVINKPRNMVVhpAPGHVQGTVvhallHEIGERLKQEFPEEpwrpGIVHRLDKDTSGLLITVKTRRAKAVYSELFSSKQMKKMYIAICIN--SPAQKHIH-TRIARHPVKRKEMTVLskdtEGGKEAITHCHVL--ASNGRLSVVaLYPETGRTHQLRVHMKHLGTPILGDPVYGVPSInfRYGLDKQQLHAYSLVFTHP--------------
>UniRef50_A7VVQ2(70-279:298) Pseudouridine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVQ2_9CLOT  E=8e-15 s/c=0.39 id=33% cov=89%
--------PEALPVSVLWEDDALLILNKPP-LMPVhpcPG----HDRGTVCNFVSYYQKRKGedwrfrpLNRLDKDTSGLVIGAKDSYTASALN------DVGKTYFAVCQG-SLPGEGVIDTPIRLK-EGHSIQREAGEGGKPAVTHWKSLAQGAAAGKSYTLLALtleTGRTHQIRVHLSSIGHPLAGDDFYGG--SRELISRQALHCGLVELTHPFFLSRICVKAP---
>UniRef50_D2RJW8(69-272:285) Pseudouridine synthase, RluA family n=2 Tax=Acidaminococcus RepID=D2RJW8_ACIFE  E=8e-15 s/c=0.41 id=37% cov=90%
--------PEEAPLSILEETELYLAVDKPAGLVTHNAGKE--RTPALSRRVAWYFQthhiSSAVHpvsRLDRETSGVVLFAKNACLHHMLSRNRLE----KTYLALTLGHWEQPAGILDWP-IGRRPGSIVERQVDPDGQPARTRYQVLgEKEGLSLVRFQLE--TGRTHQIRVHAAAAGHPLLGDTLYGTPGAPG---RHYLHAWKVAFREPFTGRPVEITAP---
>UniRef50_Q2IJ40(86-325:353) Pseudouridine synthase n=7 Tax=Cystobacterineae RepID=Q2IJ40_ANADE   E=8e-15 s/c=0.34 id=40% cov=92%
-------PPPEPSglvaqdlpLAVLHEDADLIVLDKAPGMVVHPARGTPHSTVVNALLHRlglpaaagpdgALPRLGLVHRLDKDTSGCLVVAKTEAALAALQAQWKGRSVEKVYLALCHGALA-AAGRLDTP----YGRHPRDRLRF-TGRLASSRRAITEWrvreafgPAASLAEVTLH--TGRTHQIRVHLSEAGHPLLGDAVYGGTrrEAR-LAPddparraaeavgRQALHALRLGLDHPRTGRRLVVEAP---
>UniRef50_A5G5P6(76-268:296) Pseudouridine synthase n=2 Tax=Geobacter RepID=A5G5P6_GEOUR   E=9e-15 s/c=0.43 id=36% cov=83%
-----------PELDILHEDQWIMIFNKAPGlpmhhaaevdernLVDLGTKLLAGRDGGSVKLR-------PVNRLDRGTSGAVILAKSSMAAAMFGRLIMDEGLGKLYLALVEGELAE-DGVISVPL---------------EGKEAETRYRVLFHRSDCTF-VAVYPVTGRMHQIRQHFKFIGHPIRGDRRYGGQPLPGFAGN-ALHSFRTSIVHPATGETLQVFAP---
>UniRef50_C2D7A7(86-311:338) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7A7_9ACTN  E=9e-15 s/c=0.36 id=30% cov=94%
-------------LDIRYEDDYLLVISKQTGLVChpSPGHVDDTLSNALVAhcgyehlglLQGD-DRPGIVHRLDMDTTGLMVAAKDNTTQQALQDLIRLRVFDRRYIVLVQGYVTPDEGTITTGIARSKKNRLKMCISKDpASREAITTFKTLErfeagSKDDGYSLLECHLYTGRTHQIRVHMRYVGHSVVGDPLYGrkGDALNQGLQRQFLHSWRMSFDHPITHEHLQFcdKLPSD-
>UniRef50_Q7NBQ4(79-289:312) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBQ4_MYCGA  E=1e-14 s/c=0.39 id=30% cov=92%
-------------LDIVYEDDDLIIVNKPTNMLSHPTTHNE-PDTLLNCLMYHNKKQKVylAHRLDKDTTGLIVATKNFKALEKIQEQITKRIMKRYYLAIVHYPFNELRAVIDAPI--GYLKDHDLKFGVENTKNPKNAITKI-YVLDQNKKYALikcELLTGRTHQIRVHMDFIKHNIINDPLYGVKGEQRTDYKQFLHAYQLELTHPTTNVSLFFEVKPD-
>UniRef50_B8HC32(88-315:326) Pseudouridine synthase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HC32_ARTCA  E=1e-14 s/c=0.36 id=36% cov=91%
-------------LSILHQDEHLLVVDKPHFLPTTPGGTYIQESAlVRLRNQLDLPDLIPMHRLDRMTAGVLLFSTNPQTRGKYQVLFEKRQVQKEYECVSAADPAPGHPAVEFPVVVR--NRMTKSRSYllaevVEGEPnAETRIERLETfdggASPDTngstaavpgsptrlARYRLEPHTGKTHQLRVHMASLGLGIVNDAFY--PDLLDKAPDdyakpLQLLARGIRLVDPISGSPVEYRS----
>UniRef50_A9GEI0(8-205:241) Pseudouridine synthase n=2 Tax=Myxococcales RepID=A9GEI0_SORC5   E=1e-14 s/c=0.42 id=44% cov=84%
-------------LSLLHLDDRVAAFAKPSGLLvhrgwgDAPVVFVDLAERALGR--KVYP----VHRLDRATSGVLLVALDPAAAALLCAQFEQGLARKRYLALVRGVP-PEHGCVDHPI----PRR-------EGGPrvPAVTDFERL-HALERYAVVEARPRTGRLHQVRRHLKHISHPIIGDVNYGKGEhnrlfrERYALHRLALHAAELAVAHPETGAPLRVAAP---
>UniRef50_Q7VI73(72-293:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=1e-14 s/c=0.37 id=35% cov=90%
----------------LFFNEDFCVYDKPHNLLTHPkGRFYHYslNDALKLRFGN---YANAIHRLDKQTSGLVLCAINPQSEPELKELISTRQILKTYYAIVEGKLT-QECLIDEPIALQkykGTDLSIKSIISPYGKPSRTKlYPLAYHSPTDSTLIRVLPLTGRTHQIRLHCAHIGHRILGDplygtkeeysRFYlESPalpphqyESYFGAPYLCLNAHTLAFSFK--GKSYYFTSCHNF
>UniRef50_Q5M721(88-309:369) RNA pseudourine synthase 5 n=13 Tax=Embryophyta RepID=PUS5_ARATH   E=1e-14 s/c=0.37 id=36% cov=80%
-----WKEPDTPYsLEVLYEDDDLIALNKPSGLQVLPGGLFQQR-TVLTQLQwcfgkndsyigsRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEgtslvgsgnldqecgtgRKLSKIYRALADGIVEEDEVVIKQPIgVVRYPGVAQGlYVASPEGKPAFSKVFVLERDREKNCSLVKVEIqSGRPHQIRIHLAYMGHPLVGDPLY--------------------------------------
>UniRef50_C1A2U5(96-308:360) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C1A2U5_RHOE4   E=1e-14 s/c=0.38 id=35% cov=89%
---------------ILHLDDDLVVIDKPHFLPTTPsGRYLRESALVRLRVRLDNPDLTPIHRLDRGTAGVVMFSARPATRGAYQSLFEKRQVTKVYEAvsarpSRWDQDAPA---LDVPLVYRnhiEARRGELRVVVDDSREPNSETTIeargtgVSASGRAVLHTVLRPQSGRMHQLRVHLAALGAGILGDRRYpdllpDAPDDHSLPLQLL--ARELEFTDPLSGRARRF------
>UniRef50_B7KI53(87-301:308) Pseudouridine synthase n=12 Tax=Cyanobacteria RepID=B7KI53_CYAP7   E=1e-14 s/c=0.38 id=37% cov=86%
----------------LYSDSDVLVVAKPAGLPILPgGGFVEH--TLLGQLKQHYPEDTpfPIHRLGRGTSGLVLLARSSFARGFLSEQMRSRQISKIYRALI-----PKSDLTDHFTI----NQPIGKIPHpvlgyifgatPNGKDALSECRVLKRTSETTL-VEVKILTGRPHQIRIHLAAIGYPLIGDPLYtmgGIPKIQTpITPEKLpvpgdcgyyLHAYQLTFNLPHRESPLTVTCP---
>UniRef50_B8C2A6(273-596:596) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C2A6_THAPS  E=1e-14 s/c=0.25 id=44% cov=95%
-------------LQTIYFDKDIVVTNKPSGLLCVPGvnhyrslldlvyevyggganpndkgisTTQQTTDESATTTLEEPLQKDSMiaHRLDMDTSGIVVFARTRLAMSKLHKSFRERTgTRKRYEALLVGWLDTATwassannssnnnylgcnagdttadtdlggGEINLPLQRDHKHPPFmrvstpeseveaamavrdlnhagwKKLVAKRPKPSTTQFRILahEVWMDHpITRVELTPITGRTHQLRVHCAAIGHPILGDPAYgwcgeAHPNGgfceevmRQMSPtcagmelqrdveesvqasgrTMCLHARRLGFHHPATDKYVEFEALPSF
>UniRef50_A8VZ12(91-301:305) Pseudouridine synthase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZ12_9BACI  E=1e-14 s/c=0.39 id=36% cov=92%
-------------LSIRYEDEWCIVIDKPAGLLTIPNETYEN-DSVAGRVigyfkSCDHPATfHPVTRLDRQTSGLMLIAKDRHSHSLFMKQQCAGLIDKEYVAVTpPGFPWIA-ATVDAP-IARHPDSIIERMVHHEGQKAKTRLvKVNENASGSLIRCKLE--TGRTHQIRVHLAFTGWSILGDGLYREEKSADEHKRTLLHACSLRWDEPFTGERIEIheSVPEDF
>UniRef50_C1EDH6(58-286:345) Predicted protein n=2 Tax=Micromonas RepID=C1EDH6_9CHLO   E=1e-14 s/c=0.36 id=36% cov=86%
--------PRAP--VVIHEDDDVLVIDKPAG-------MSFHNDDLVTNLpgvlstvralqakgelrGSDYAgELHSVHRLDKITSGILLLAKNERVASWLARQFARRRVHKYYVALSARKPSKKMGTVRGDMAQARRGTYKLTRCSSNSTPAAVTKFVSRGvrgaspGGDRPLRVLLmRPLTGKTHQLRVCAKSLGAPVLGDAAYGGADTNKNAnkndgaggeDRGYLHAAALRVAMP--------------
>UniRef50_B7GAM3(69-291:325) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAM3_PHATR  E=1e-14 s/c=0.37 id=34% cov=93%
---------QDLPLDIIFEDEHMIVINKAANMVVHPAAGNWDGTVVNALAYYLANRSESisfrpgiVHRLDKGTTGVLVVAKTSQTLATLSNFFAARQVKKTYMAITVGNPG-KHVVIDKPIGRHPLHRQRMRVVpdphqkNSTGRRALSYVDTLAFDG-KLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDIYGladwnkklSKTHRIVRP--LLHAYKLEINHPVTGEPMVFKA----
>UniRef50_A5CFM2(105-296:312) Pseudouridine synthase n=2 Tax=Orientia tsutsugamushi RepID=A5CFM2_ORITB  E=2e-14 s/c=0.42 id=30% cov=87%
-----------------------IIINKPALLPTQGGsKISLSLDDAIKYLNKSfYYDFKLVHRLDRETTGLLIIAKNHGTAIKLSQAFLHHSIEKEYIAILQGVPSQLSGEI-ITNITKTGDRMIE--TQNGGKVSITKYQVKAISINSQLSLVsFIPVTGRTHQLRVHAAKIGYPIIGDKKYNISNTY-YNYSLKLHAAKICIPKHLFGNQRIYYAP---
>UniRef50_B4WMC0(83-322:328) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMC0_9SYNE  E=2e-14 s/c=0.34 id=36% cov=90%
---------------VLYEDEDLWVINKPAGLPVLPsGGFLEHTLLYQLRVRYRDCQSAPVHRLGRGTSGAMLIAKSHIAKVQLSEQFRKRSANlssnttpntastctlgKTYRALI--APTTPDQLRDR-FICTYPigKLPHTRLGYIYGHlrdahshektigpinsmVSRSEGSVLRRRAHSTL-VEITIQTGRPHQIRIHLAAAGYPLLGDPLYSAggvpdPHGYALPGDCgyHLHAHRLQFAHPRTGQSIAITAP---
>UniRef50_C5NUK8(82-279:293) Pseudouridine synthase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NUK8_9BACL  E=2e-14 s/c=0.41 id=34% cov=87%
---------------IIYEDAYFLIVNKEINLPSIPSRNLE--DESLLEIVNYYFKKKNINtiphivtRLDKNTSGLVLI----AKHRHVHALFSNMEIDKFYTALVSGKVKDNE-IIEAPIRRVTSSIIEREVG-EGGEFAKTEYWLDDYIVDKDISVVkLKLYTGRTHQIRVHMKYKDYPLLGDELYGGDVSN--ISRQALHCTNLKFIHPITDEVVNVRA----
>UniRef50_B0RMG5(109-311:319) Pseudouridine synthase n=4 Tax=Gammaproteobacteria RepID=B0RMG5_XANCB  E=2e-14 s/c=0.40 id=37% cov=89%
--------------TVVHADGQIVVACKPHFLPVVPAGAYV-RETLLARLVRrfDNPSLVPLHRIDRDTAGLVLFSANPATRGIYQALFRERRIHKHYLA--VAPPLPALTFPYVHRSRLEPGEPFFRMREGVGEPnSETVIDVVARGADMwTYR--LEPVTGRKHQLRVHMAALGVPILHDRFY--PELEDQRPDdperpLQLFAHMLAFDDPITGEPRRFTA----
>UniRef50_C0QV86(101-313:329) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QV86_BRAHW   E=2e-14 s/c=0.38 id=33% cov=93%
------NPiPENIDLDILYEDKYLLVINKPAG-MSVHCSPSEMSGTLVNALLykiKDFDfvgnkeRAGIIHRLDKDTSGLMIIGKNANIVSSIQEQFKNRTIKKIYHAIVVGVLKDNYIEINLPIGRHHVYRKKMTV-REDGKEALTHIKVLKrFNSHTLIEINLK--TGRTHQIRVHSSYKGFPVAGDKIYSKSFSKYSG--LMLVAKKIEFMHPITKELLDFE-----
>UniRef50_C6E472(76-267:302) Pseudouridine synthase n=4 Tax=Geobacter RepID=C6E472_GEOSM   E=2e-14 s/c=0.42 id=35% cov=85%
-----------PELDILFEDSWIISLNKAPG-LSVH-RTEDPDEVNLVDLAETLLQKRDgvgrlrpVNRLDKGTSGAIILAKSAVAAGMFGKMVQEEGLGKLYLALVEGKLQK-QGVIDAPL---------------DGKESQTSY-LRLFHGGGVSLLAVYPITGRMHQIRQHFKMIGHPILGDKRYGGRALTGFTGH-ALHSFKTTLVHPATGEEVNIPAP---
>UniRef50_D1SY25(115-317:328) Pseudouridine synthase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY25_9BURK  E=2e-14 s/c=0.40 id=36% cov=88%
--------------TVLYQDEHLVVADKPHFLPVVPtGRYLQHTLLVRLKRRLGLDGLSPVHRIDRDTAGLVLFSVQRATRGRYQALFRDRAVDKTYEA-------VAPWRVDVAFPRERSSRieesPQFFRMHEVPGEANslTRMEVLDVDG-AWARYRLSPVTGRRHQLRVHMAALGLPLRGDAFYPEvndpPEGDFSRPLQLL-ARAIAFTDPVTGRERRFES----
>UniRef50_A8SLC1(85-307:318) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLC1_9FIRM  E=2e-14 s/c=0.36 id=34% cov=92%
-------------LDIIYEDENIIVMNKPKNLLSHASSKEDYGNNLVDFMigylleKGDYnPRAEKtfvpaiINRLDRNTSGLVIGAKNSKALRELNR-LKENSIEKYYKTIVSG-KVKKNFVINEKLEKDEE--KNKSTISKNGKDSITEI-YVEKNNDEFSLLKIKLITGRTHQIRSHLSSKGFYIIGDIKYGNAKVNKFfrdnfnLRSQFLHAETIIFKNIvgdlSYLNNKEFFAPMD-
>UniRef50_UPI0001792C80(33-233:278) PREDICTED: similar to RNA pseudouridylate synthase domain containing 1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792C80  E=2e-14 s/c=0.40 id=34% cov=82%
---------------IVYKSNDFIIVNKPEDVFT--NNHNKARPSLDVLLRKKYPHLVNsnlehsfyfVHRLDFVTSGVLCIALNKRACAKASCAMQKRISRKYYIALVRGHVSQDH--LDLTDSIGYCAREAEgnrkmctidKVCCTGPRDAHTRLVVLErgvFMSYPATKVLLQLITGRRHQIRVHCSTIGHTIVGD--YTYSGRKDISPsRTFLHSYRL-------------------
>UniRef50_Q126H9(119-355:378) Pseudouridine synthase n=1 Tax=Polaromonas sp. JS666 RepID=Q126H9_POLSJ  E=3e-14 s/c=0.34 id=35% cov=95%
-----YAPSRE--FPVLFEDDFLLAIDKPAGVAVHGGSGVSF--GVIEQLRMARPQAdflELVHRLDRETSGILLIAKRRMALKLLQEQFRERETDKVYLALVSGNWPANHRVIDKALhkyllpggagegerrVKVVPNDHPDGMRSVTLVKVKSAFAALP-AAPGTPFTLLEVTikTGRTHQIRVHLANEGHPIAGDDKYGDFELNkslqksvaGGAPlkRMFLHAWSLKFNHPKTRKTIHLETP---
>UniRef50_C4GBK1(103-332:341) Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBK1_9FIRM  E=3e-14 s/c=0.35 id=36% cov=91%
-------------LNIIYEDEDILLIDKPAGMPSHPS-MNHQKDTLANAVLY-YYQKQGIpfvfriaNRLDMDTSGLVAVSKNSLAAARVKQMIDKRQIHREYLCIVEGSFSADSSLakrdfvkmrydADGQMIGGRIWAPisrregsvlERRVNASDGQTALTDFEIVQEGAKySLLRVWLG--TGRTHQIRVHMNYLGHPLPADYLY-HPVYQDIS-RQPLHSAKLRFPHPVSGRQMCFESrlPAD-
>UniRef50_Q6MEZ4(34-232:243) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEZ4_PARUW  E=3e-14 s/c=0.41 id=34% cov=88%
---------------ILYEDADLAIIYKPSGLLSVATAFEK-GETTHALLKAHYKprKVFVVHRLDQDTSGVMVFAFNEKTCNGLKDLFEVHDISRSYTAIVEGQLLSPSGTWKSYLYED-----SQYFVHETedetyGRLAITHYRTLK-TLKKYSLVELTLETGRKNQIRVHCQSAGHPVVGDKKYGAHTNP--LKRLCLHAHLLAFKHPISRKIIRIESP---
>UniRef50_C4PNG9(84-293:335) Ribosomal large subunit pseudouridine synthase D n=11 Tax=Chlamydiaceae RepID=C4PNG9_CHLTZ  E=3e-14 s/c=0.39 id=37% cov=88%
--------PEDIPLDKVYEDDMILVINKPRDMVVhpAPGHTQGTVvhallHEIGERLKQEFPEEpwrpGIVHRLDKDTSGLLITVKTRRAKALYSELFATKQVKKLYVAICIN--APSQELIH-TRIARHPLKRKEMTVLSThaegGKEAITHCHVL--ATNGRLSVVaLYPETGRTHQLRVHMKHLGTPILGDPVYGIPSInfRYGLDKQQLHAYSLVFAHP--------------
>UniRef50_A0JSJ6(88-305:314) Pseudouridine synthase n=2 Tax=Micrococcaceae RepID=A0JSJ6_ARTS2   E=3e-14 s/c=0.37 id=34% cov=91%
-------------LSILHQDDHILVVDKPHFLPTTPGGTYIQESAlVRLRNQLDLPDLIPMHRLDRMTAGILLLSTNPETRGKYQVLFEKRQVQKEYECVSAAEPAAGYPAVGFPVVVR--NRMTKSRSYllaevVDGEPnAETRIELTKtfdagtHASEPARRGLyrLEPHSGKTHQLRVHMASLGLGIVNDAFY--PELLDKAPDdytrpLQLLARGIRFIDPITGQPVEYRS----
>UniRef50_C7G8E5(9-218:221) Ribosomal large subunit pseudouridine synthase family protein n=5 Tax=Clostridiales RepID=C7G8E5_9FIRM  E=3e-14 s/c=0.38 id=32% cov=92%
---------------IIYEDEDIIVCKKPAGVATQTRRIGQADMESLLKNYRaskgELPYIGVVHRLDQPVEGIMVFAKNKEAAADLSRQIKTKLADKYYYAMTDGVPEKKKGTLEDELLQNGKTNTSEVV--ERGTPqakhASLSYEVVEQDGKH-AVLRIKLDTGRHHQIRVQLAHAGMPIVGDKKYNFKENIApSGGQLALCSFKIAFRHPKTHRKLEFEIDKPF
>UniRef50_A9B0U7(67-284:312) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0U7_HERA2  E=3e-14 s/c=0.37 id=34% cov=90%
---------------ILFEDEWILVLNKPAAWYSVatPWDTFGHLEGALQRffLERDGEAVpfHLVHRLDHGTSGALIVSKNPSLNSRFQRMFNEGRVQKTYLALcsglpdwtklevVTGHSRGEFGLWSVypAAMIDQLYGPKDRRV----RRAHTSF-TVQAVGNAAALLAARLHTGRTHQIRLHAKHIGHPLVGDQRYGgvTQFGNLSIPDQLLHAAWLQFPHPRYGSMLELIAP---
>UniRef50_A8RDU5(92-294:317) Pseudouridine synthase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU5_9FIRM  E=4e-14 s/c=0.40 id=30% cov=90%
-------------LSILYEDDLFLIVYKPSFMLVHSDGNET--ETTLYDIVKGYYLLQgldipvrAIHRLDKETSGAVIFCKIPLLQPLLDYMLQEKQIDRQYLA-LCAKVLNDDLTIDKQIGRDRHNAKKMRIS-KQGKSAKTDVHVIAQYQDYTL-IACKLYQGRTHQIRVHLASITHPLLHDTLYGNYDKR--INRCALHAYRIQLCHPFTQQNITIECP---
>UniRef50_Q00YR3(55-249:300) Probable pseudouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YR3_OSTTA  E=4e-14 s/c=0.41 id=35% cov=84%
-------------MVVLHESEAVVIVNKPRGMSfhseFAPGALARLRTQMGERT-----AVMSVHRLDKPTSGILVFAKNARARDALSKAFEEREIVKYYVGMSNRKPRKKMGTVRGDM-----TRSRRKawmLTSTTESPAETKF--VSFGARGMGEralrmFVFRPMTGKTHQLRVAAKSLGSPLLGDDTYGGERD---VDRTYLHACAIRIPKSVLGETI--------
>UniRef50_C7LP84(4-201:232) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP84_DESBD  E=5e-14 s/c=0.40 id=35% cov=88%
-----------PGFELIAREPGFVVVHKDPGLdfHDCDGRMG------LCSLVRDRLQARVfpVHRLDKATSGLLLLARSREWAAALAGLFRERAVQKYYIALSDLTPGKKQGLVQGDMVRS--RRGSWKLARSMERPARTRF--LSWSVRPGMRLfVLKPMSGRTHQLRVAMKSLGAPILGDSLY-HPIVPDWPDRMYLHAH--TLRFSLGGQNFAYACP---
>UniRef50_C4XWV4(145-353:432) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XWV4_CLAL4  E=7e-14 s/c=0.38 id=34% cov=89%
---------------VLYEDENILVVNKPAGVPTHPNGI--FRRNSLTEIVR-FELGVSVypcHRLDKGTSGVLVLAKTKTGKMlQEVLQNKKSHVEKWYVARVRGKFPFASCSYTSPVFsintagTGYLNIPNAERVPAT---SSTHFKMVSYSPElDESIVFCRPISGKMHQIRVHLRNMGYPISNDPLYNAENGLGHAKNQLekeLYAQVLA-EWPCFGIDKTIRPP---
>UniRef50_B3PEU4(123-332:349) Pseudouridine synthase n=18 Tax=Gammaproteobacteria RepID=B3PEU4_CELJU  E=7e-14 s/c=0.38 id=34% cov=91%
---------------VLFENEGLLVINKPPG-LAVHGGSGVNLGLIET-LRQMRPEArylELVHRLDRDTSGCIMVAKKRSYLRHLQAALRDKvegQIEKVYCALVVGHWPARLHQVNAPLLRTEVGADERYVrVHPDGKPSLTLFNVIQRYQGFTL-VEARPVTGRTHQIRVHARHAGHGLVGDEKYGDDDInlhmrNQGIKRLFLHASSLGFCLPGEAQMTWVEAP---
>UniRef50_Q31EX3(99-294:300) Pseudouridine synthase Rlu family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EX3_THICR  E=8e-14 s/c=0.40 id=36% cov=81%
--------------------DDFSVWYKPKGVLSQGSKWGDH--TTLNRwIETHYLFKEppekrpcwIVHRLDKATDGLILIAHNKKSAQMLARRFEAHQIGKSYQAWVKGKFGETERVFDQDV---------------NGKTALSKAHQLVYNSDNDCSLVQVTIaTGRKHQIRIHLSKAGFPIIGDRLYG--DAQEGDPDLQLTAVEITFLSPQGTIEQRFQLP---
>UniRef50_B8LC17(82-279:341) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC17_THAPS  E=8e-14 s/c=0.40 id=38% cov=83%
---------------VVYEDDHMAIVNKPSGVVL----YRAEGGRGGGARDEDTPQNvplkrpQPVHRLDRPTSGLVVVAKTKLAAVHLSQQFEFRKAEKTYVAIVNGIPRQS-GVRAEPM--QW-----NTIDYDlEEKTAVTRWRVLRkvkslHGNDGTLTLVeMKPKTGRYHQLRRHCAwVCNSPLVGDTTYDGGSEGALRLRkrgLFLCSSEIALEHPHYN-----------
>UniRef50_Q5GT77(89-373:389) Pseudouridine synthase n=8 Tax=Wolbachia RepID=Q5GT77_WOLTR   E=9e-14 s/c=0.28 id=36% cov=91%
---------------ILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVS-GQEKVVIDKNSPqdATTRFSIIakfklnkplvqrpiiqvadtqlyEHCNLSLSRVChlsslsscyssallchlsapilvssktdhkqahyttfsikkldssimcrndtrsvaylkLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAfvDGIASKIHLHSYSLSLKLPN-NKKITITAP---
>UniRef50_Q6MND5(12-222:228) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND5_BDEBA  E=9e-14 s/c=0.38 id=37% cov=86%
---------------IVEKSKHWLVINKPSG-VSV------HNDppDVRTLLKKQltpgtYQDIHPVHRLDKETSGLLLVGLDAETAANLSGQFQEHKVEKTYYALLRG---------ELPVSTDWQewNTPISDKAEGRKNPqgllkdrveARTLYKVLE-ANKYFSLVEVRLITGRQHQIRKHTALIRHAIVGDTRYGDPKYNErmaniyQTKRMFLHAARMTVMINGYKHSFEAPLPPEF
>UniRef50_B7AN06(40-275:297) Pseudouridine synthase n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN06_9BACE  E=9e-14 s/c=0.34 id=32% cov=95%
--------PDKIKLKVMYEDEDIVIIDKPSGMLSQKASagdkslveyVTEYLLDTGSLTQKDLITFRpgICNRLDRNTSGLVVAGKTIKGLQEMSEAFRDRTLHKYYICVVAGRINE-RSRVSGYLVRD--EKTNKSTIYADYKEAMDNAEAdminnieTEYipavSNDNFTLLKVKLITGRTHQIRAHLASLGHPIAGDVKYGSRQInKRMSDQYHIKSQMLhayELDYPQRGLCVRTDIPKEF
>UniRef50_Q1GB64(63-284:302) Pseudouridine synthase n=17 Tax=Lactobacillus RepID=Q1GB64_LACDA   E=1e-13 s/c=0.36 id=34% cov=91%
--------PVNPWLKvsrrpldIVEETADYLVINKPAGLLSIPSGFHA-EDAVINRvlayfekqgVNPAYVKPHIVTRLDQDTSGLVLLGKNAIAHDRFSKLGKDAFIKK-YHAIVHGNFAEGDlsGLIDKPLarVGDTVKRE----VNPKGQRALTEYRVLNQVP-GASLVELRLLTGRTHQIRIHMASIGHVLYGDDLYGARDAFA---RQALNCFYLAFPNPFSGEEREIEIP---
>UniRef50_Q6MKN0(85-282:283) Putative RNA pseudouridylate synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKN0_BDEBA  E=1e-13 s/c=0.40 id=35% cov=86%
---------------IVFENEHFVVTNKISG-LPVHASVDNLHENLQSYLQQTLHQNVYVtHRLDVPTRGLIVYAKSPEFQTEFNKLLIAREMNKIYRARVQGH-SLSTGLLQhymepsprAPKVVSKELQPKWQECL---------LEILEFSKleNEMSEVRIKLHTGRTHQIRAQLSAEGHPIVGDVAYGAVKVWD-EERIELEACELAFTNPLTGEHHEFK-----
>UniRef50_Q49WD7(67-275:284) Pseudouridine synthase n=5 Tax=Staphylococcaceae RepID=Q49WD7_STAS1   E=1e-13 s/c=0.38 id=31% cov=91%
----NLKPYQQP-LNILFEDDYLIVVSKPPYQNCAPSRDHLHYsivEQVLGYLNEKQPGINphIVTRLDRNTSGIVIL----AKHGFIHHLMSNLNIDKKYLCICYG-KTEKEGVIDAP-IARHPESIIQRRVDAAGKTAQTRFKRVEY-KEGFSMCEVTLLTGRTHQIRVHFQHIGHSIVGDALYGGKHESYHHQ--LLRCTQVAFIHPIKNQNIVI------
>UniRef50_A9BJA7(70-274:303) Pseudouridine synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJA7_PETMO  E=1e-13 s/c=0.39 id=33% cov=85%
--LEELSRPTQPSLKarpvsfdIIYEDKDLLVINKPAKVSVHPGSKEEMATIIegVMHYSRGEFEPHLVHRLDKLTSGVMVVAKNKQTARELTQLIKSRETRKYYLTLLVGNLNKKSG---------------ELVSTVYGKTAQLKFNLkkkFDLFGELYSLVEIELYTGRKHQIRVQFADLGFPIAGDDNHGDKKQNKLlrknygLKRIFLHASKISFD----------------
>UniRef50_A1SUH8(13-195:242) Pseudouridine synthase n=3 Tax=Alteromonadales RepID=A1SUH8_PSYIN   E=1e-13 s/c=0.43 id=31% cov=81%
------------YFSVVHENNEFIVINKQAG---INFHSEDGEFGVVVAAEKAFScKLYSVHRLDKMTSGLLLLAKSSPSAAQLSALFFEHQIQKYYLAISDKKPKKKQGLIKGGM--EKSRRSMWKLTKQTNNLAITQF--FSYSLENGKRLfVIKPRTGKTHQIRVALNSIGSAICGDPLYAekSPQSAAF-DRAYLHA----------------------
>UniRef50_A1AVB5(89-280:303) Pseudouridine synthase n=2 Tax=sulfur-oxidizing symbionts RepID=A1AVB5_RUTMC  E=1e-13 s/c=0.41 id=33% cov=84%
----------------LYEDKGLLIINKPSGLSVHSGSGVD--VGIIEALRQIYKKpIELVHRLDRATSGVLLIAKKRSVLKNLHEQLSQHTVEKRYTALVKGVWSKKCHTIDAPL---YQN-SRYIMVDAKGKYAISHFQPLKNFSDGGFSASLVEIsieTGRTHQIRVHAKYAGHALACDDKYGDKEFDRQVkfkglKRLFLHAHQFIFTNP--------------
>UniRef50_C4L584(64-279:287) Pseudouridine synthase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L584_EXISA  E=2e-13 s/c=0.36 id=32% cov=92%
-------PPESPSLdmvaserpiRILYEDDTLLAVDKPAGIATIPSRLhptDTLANAVLGYYQR-IGLSSAIHvinRLDRDTSGVVLFAKYGFIHHRFSELQKANGLMRTYKALVEEEVTPQT--IDAP-IGRAENSIMERVVTTEGQRAITHILACQpFGSGSLLTIRLE--TGRTHQIRVHLRHIGHSLIGDSMYGGT---ARMPRHALHSASARFIHPMTGDTIQIEAP---
>UniRef50_D1AVV4(67-278:289) Pseudouridine synthase, RluA family n=2 Tax=Fusobacteriaceae RepID=D1AVV4_STRM9  E=2e-13 s/c=0.37 id=31% cov=91%
--------PIKMNLDIVYEDDDLLIVNKEPYLLTHPTLKKVDKtlaNGIVYHFIEKYNKNlvpRFISRLDMNTSGLIMIAKNSFSQSFI--QSGKANVTKKYLA-------LAENMFEKEEIIVEEKIYKDgdelaRIIDDRGQYAKTKFKLIKnYPHLDISLIECELFTGRTHQIRVHLKHLGHPIIGDSLY-NPDSifNKIAKRQMLHSYKLSFTHPSSGKRIDVEIP---
>UniRef50_Q28C59(51-299:324) RNA pseudouridylate synthase domain-containing protein 4 n=1 Tax=Xenopus (Silurana) tropicalis RepID=RUSD4_XENTR  E=2e-13 s/c=0.31 id=36% cov=93%
---------------VVREDPELVLVNKPHGLPVHGGpTVERSVASLLPALAKHHFgwKAEPLklcHRLDRDTTGALILARTTEAAERVQQALREREVHRVYWALCLGTPSPREGILDIPIMekeTSGPQKhykmalsPRFRVSEEGAvervrVPRSAHEAVTRYrtlgAASGASLVELHPITGVKHQLRVHLaLGLNCPILGDHKYSHwgrlapqkppdsvlralgltvPQARTLS--LHLHAVQLTLPSSDGSTPIVLQCPLPY
>UniRef50_UPI0001757DD8(34-232:274) PREDICTED: similar to AGAP004401-PA n=1 Tax=Tribolium castaneum RepID=UPI0001757DD8  E=2e-13 s/c=0.39 id=32% cov=84%
---------------IVHRSANFIIIDKAYDLkINSNNRNEE---TVQTFMKKNLPYLASnqlhheyyfMHRLDYSTSGLMCVPVHKKACQVASQAIQQRKCKKYYIALVRGYLSSNLLDLNFPIGRDNSITDIEKMCVthdSNSRSARTLIVVLEnglFENYPSSKVLIRPITGRRHQIRVHCAHIGHTIVGDYTY-SNKKDTTPERMYLHSLRLVI-----------------
>UniRef50_A4S4A1(83-289:357) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4S4A1_OSTLU  E=3e-13 s/c=0.38 id=32% cov=82%
---------------VLTVNDDVVSVWKPATVPVHPTG-QYRRNTVLALLaasRRDLGRLFPIHRLDKNVSGLLLLARSSEAANEMRVKMEAREMRKEYVARVRgafndGDATPVSNVESLGFdskgrVAIW--RGKKGVtdlderTLKSFKDASTKFTCIKTLVDGTSLVRCEPFTGRSHQIRAHLAMLGYPIANDVAYGGALVEVERARAIQHA----------------------
>UniRef50_C5TJ50(97-303:307) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=C5TJ50_NEIFL   E=3e-13 s/c=0.38 id=37% cov=87%
---------------ILHIDEHLIVVDKPHFLPVIPsGRF--LRETLLTRLRlrselqhLNVEDITPIHRLDKDTAGVMLLSLNPATRRDYQTMFQEKTVQKTYEA-----VAPTRTDLDYPL--DLSSRmergEKFFLTRETeGEPnAHTTIELIENrGAFSLYR--LTPHTGKKHQLRVHMMSLNMPLMNDALYPNPLAAGDEDYdrpLKLLAKRIEFTDPVSGEIRVFES----
>UniRef50_C9RKF9(143-340:386) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKF9_FIBSS  E=3e-13 s/c=0.39 id=35% cov=83%
-------------LDLVVQTEDYVIVNKPSGLASQPGSGTRPGESLVEYLW-EWGRNEGLdfkptiaHRLDQETSGLIIAALHGDTLRDFTRMIREHVVDKFYFALVKGNLKKDRGTISESLLrTDSAKGSKMLVGQddENAQKAITHYRVKQhYEGYDLVKIKLE--TGRMHQIRAHFASIGHPLLGDTRYGdfalNREVKKLfgLNRLFLHS----------------------
>UniRef50_UPI0000588046(149-366:414) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000588046  E=3e-13 s/c=0.36 id=38% cov=85%
---------------VIFDKGDIIALDKPYGLPVHGGPGMKHSiDSLLPQLAwtlnnkggGNTEELHLIHRLDKETTGVMLLARNERTARVLHEMFRKRQIIKRYLVITVGIPSPKEGILDMPMIekeIDGKHRmvikPDMADLYpdtigmrsgrksRDSKEAITRYKVLSERG-NCALVQLEPETGVKHQIRVHLAqGLGCPILGDHKYSHHD--RLAPQKLtagiLHS--LGITQP--------------
>UniRef50_Q04XF3(86-289:312) Pseudouridylate synthase, 23S RNA-specific n=4 Tax=Leptospira RepID=Q04XF3_LEPBL  E=4e-13 s/c=0.38 id=31% cov=86%
---------------VLEREDY-LIIHKPPGIAShsgpgdrspslVNGLLHHFKE--LSKVGGE-ARPGIVHRLDKPTEGLMLIAKNDRAHGKLSELFRKREIEKKYYAWIQGHLPAETGTIDLPIARHPIERLKMTVS-PKGRKSVTHYKVLKYVNSRSGRkfsfVEVGLETGRTHQIRIHFQSQRCPVVGDLLYSRTGSQFESYGLQLLSYYLKFKDPFTG-----------
>UniRef50_UPI000185C0B7(100-322:342) 23S RNA-specific pseudouridylate synthase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C0B7  E=4e-13 s/c=0.35 id=37% cov=89%
---------------IVFQDDNLVVVDKPSFLATMP-RGRHITETAVVRLRRELGNPELVpaHRLDRLTSGLLIFTARREVRGAYQGLFASGEVTKRYHALTSPTPiagGASEALPETPLEL----RTRQhKIAGQMqaytleGEPnAHTIIEhisLVDVPSDadglaaDSGRVAlwqLKPITGRTHQLRLHLSELGFPILGDQYYPEIlplEAENTSEPLHLVCVEMSFADPVTGEQRTFHS----
>UniRef50_A1SV26(84-293:303) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=A1SV26_PSYIN  E=4e-13 s/c=0.37 id=33% cov=89%
--------------TILFQDEHILVAHKPHFLAVTPGG-KYVNECLQNRLRRStgIEALQTLHRLDRVTAGLVMFSVNPDTRHRYHQLFKTRQIHKSYQA--IASISDAENLTG----QEWeiKNRivqgePRFRMRVTEGEANSHSVIRCLRQSAQTALFELTPVTGKTHQLRVHMQALGLPILNDKYYPQLEplsADNYAAPLQLLAKELQFIDPVTEKPRCFRS----
>UniRef50_Q9ZMA1(61-268:293) Uncharacterized RNA pseudouridine synthase jhp_0321 n=14 Tax=Helicobacter RepID=Y347_HELPJ  E=4e-13 s/c=0.37 id=32% cov=86%
-----YFKPNEKQEKLVFEAKDFGVFDKPAQIYTHPKGYFYH-ESLLDCIQSHFGKnAHPAHRLDYETSGLVLAGKTLQSTKDLKALFMQKKVKKTYLAL-------AHGLVDKSIIINKPILTPQNIQKDlrirsqispLGKPSITLVEPLSYNpFLDISLLKITPLTGRTHQIRLHLSSVDHRIVGEGLYGVADENAReylqlkrennAPTLMLHAASL-------------------
>UniRef50_D2QLU1(8-204:248) Pseudouridine synthase n=53 Tax=Bacteroidetes RepID=D2QLU1_9SPHI   E=4e-13 s/c=0.39 id=34% cov=85%
---------------VVYEDNHLLIVNKDPGILVQGDRT---GDITLLDVLKDYIKEKYnkpgevflglVHRLDRPVSGLVVFARTSKALERMNEIFRKRQVQKTYWAVVRRKpPKDSDKLVNW-LIKDEQKNQVTVYDYEVPKSQKAELSYRVLGKINEHYLLeVNPITGRPHQIRSQLAHMGCPIRGDIKYGYDRAVA-DKKIYLHARRLYFIHP--------------
>UniRef50_UPI0001C36F41(81-270:446) hypothetical protein RflaF_04377 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F41  E=4e-13 s/c=0.41 id=36% cov=83%
----------------VYESDGVIVFNKPSGMPVHPS-IKHQGDTLGNKFAAMFPDLtfRAVNRLDRDTSGLCVVAKNALAANALQGR-----CEKVYYAAVTGEI-PETGTIDAPIA-----RERESIiirCVrEDGQRAVTHYRRIAY----NGRYSLAEIhleTGRTHQIRVHFSYIGHPLAGDDLYGG--TRCDIGRQALHCGQMSFTDPVTGEEVTVRA----
>UniRef50_D1BN73(79-302:324) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BN73_VEIPT   E=4e-13 s/c=0.34 id=36% cov=82%
-------------LDIIYEDEYILVINKAAGILMHPtSTIRDHTlaNGVLHYYQETNQHYDFhpVHRLDKDTSGIVIIAKTSVVQHAFDK--KHTHFYKSYDAIVEGH------LPSVPISINWPIGRKpgsiiERCCTVQGKPARTDITII---SKNTSKISSGKInsddvitlnnnsnicstdssltsysqfthvkcllhTGRTHQIRVHLSQLGYPLAGDDLYGGHLESIQ--RQALHAARVSFYHP--------------
>UniRef50_UPI000196C65D(71-269:282) hypothetical protein CATMIT_03019 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C65D  E=4e-13 s/c=0.39 id=31% cov=89%
--------PVDIPLKVVYEDDYLMIIDKQPNLACIPVKkylTESLGNAIMYYYKVNHIESaiHLVNRLDKETSGLMMIAKSRYVHDAFSHDI--KQVKRVYHALVKG--NPGQGTVNAPIDHAEGHGTKREV-REGGKEAITHYRTIKTTGEYSL-VECKLETGRTHQIRVHMAYLGCPLVGDPLYGEGEG------FYLDSVEIAFRHPITQQCMTLK-----
>UniRef50_Q6MM51(4-201:231) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM51_BDEBA  E=5e-13 s/c=0.39 id=32% cov=86%
---------------ILFEDEFFLAAAKPAGMpsqATVDKSRQDFFTALKNQLRNERGDAFYLalhHRLDRDTSGVMIFAKTKEANEPLADLFKTHKIQKTYLCLTKRTQKAADAWeVDNHLVEMKDTKLKKTKMVRTqsgGDRAYTKFRKLEVFPE-ALLIEAQPLTGRMHQIRVHLADRGMGIYGDDIYQAPK-NPVAPRLMLHAHALEFTHP--------------
>UniRef50_A4A1L7(11-224:250) Putative 23S rRNA pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1L7_9PLAN  E=5e-13 s/c=0.36 id=34% cov=90%
---------------ILYEQGPCFCIAKPAGLLT---QAPPHIDSLESRFkafirQRDFKTGKVYlgvpHRLDRPVSGVLTFARNVRAARRISQQFETRLVRKLYWAFVAGQPPDDQGVWEDP-IRKIPDVAMAEIVSPSdpgARWAKLKYEVLQ-RTEQGAWLEIELDTGRYHQIRVQCASRGFPILGDVSYGgeipfGPQSEDERARhIALHARYLRLKHPMVDEIVAVTAP---
>UniRef50_A9GBV3(86-329:345) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GBV3_SORC5  E=5e-13 s/c=0.31 id=36% cov=95%
----------EPDVVIpvVYEDEHLLVIDKPAGLVVHPARGHASGTLVNGLLAlpgfalapadpRDpmgHVRPGIVHRLDRGTSGLLVVAKDEPTREALKDRFARHAIEREYAAIVAGEARdatydtlhgrhPTDRLRFTSWIRGGAGAPGSHVAAP--RRAVTHVRVIERLGDAATVVACSLETGRTHQIRVHLAERGRtPVLGDPLYGkppkKPAVRAIAEELgrqALHARVLGFIHPATQKPVRWESalPAD-
>UniRef50_A6GHA7(82-309:324) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHA7_9DELT  E=5e-13 s/c=0.34 id=32% cov=95%
--------PEAIPLTVVHEDASLLVLDKPAGMVvhAGPGhdsgtlvnavlhHLQVHADALPVLPGNGPERPGVVHRLDKDTSGLIVFARGLRAQTVLAEQFRDHSIDRAYLGVVLGRPSFERRRLETTHGRDPADR--RRFAPDQGtRRAVTTMEVLRPLGAHAALARFTLETGRTHQIRMHARMVGHPIFADPLYGRrpkhPALRRLADGLgrhALHAALLGFAHPDGSGRLVLEAP---
>UniRef50_Q317H5(98-298:332) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=Q317H5_DESDG   E=6e-13 s/c=0.38 id=34% cov=85%
---------------IIASGDGLLVINKPAGLPVQPG--TGHTDCVTARLAAHFAGADfmpaPAHRLDKNTSGLLLAGTTYTALRTLQDLFRNGHSLiKDYCAWVCGIWPEQEALTLTDVLVKEGTPGKEKIHALPAGSAQPHtappkgrealCQVVPLLrLDNATLLGIRLATGRTHQIRVQLASRNHPVIGDVKYGAPACRAG---MLLHAFRLVLPAP--------------
>UniRef50_A4S8W7(1-224:264) Predicted protein n=2 Tax=Ostreococcus RepID=A4S8W7_OSTLU   E=6e-13 s/c=0.34 id=40% cov=84%
-------------LEILHEDEEMTCVNKRAGTASTPeSRVADSSAAslVVARWRRrlvdahDGALASNVvlgaslvpyvaHRLDLETSGALVVCKNAKAAARAQGAFERREVEKTYLAlcrcdefDVSG-GGASSGTIDLALAKrDDGARFFVETSSADGKPASTEWTIV---ARNRrhALVRCRPKTGRTHQIRVHLAAIGLPIVGDAAYGCLDAD-VVDRHALHAWTL-------------------
>UniRef50_C4ZBX3(6-244:244) Probable 23S rRNA pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZBX3_EUBR3  E=6e-13 s/c=0.32 id=33% cov=90%
---------------IIYEDNDIIICYKPAGIATQTRRIGQQD---MESFIRNYRAAKNeppyvgiVHRLDQPVEGVMVFAKNQKAAASLSRQIKEHTTEKYYRAASRGqgvsgadkeednHDSAWHTLTDYISFDKRTN--TSKITSEKdrlAKKAVLQYRVISVTPDRDSsqnecirtEFDIKLLTGRHHQIRLQLAHIGYPLIGDTKYGKPASNnsgtgsksgrtcgGVREQLALCSYKIVFDHPATGERMTFELP---
>UniRef50_Q2SJX2(85-286:297) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJX2_HAHCH  E=7e-13 s/c=0.38 id=33% cov=89%
----NYDPQilalNSPQPTLVADHDAYSIWCKPAGLLTQGSEWGDH--CSLLRMAELHFQSKRqvflLHRLDREAMGLVIIAHNKAAAGRFGALLQDNALDKFYLARVKGRLAQEQGEIDFPV---------------DGKSALSYYQVQHYdDATDSSLVRVKLITGRKHQIRRHFADLGYPLLGDPRYGSGNKHEDG--LMLAATELAFTCPMRRRAMRVVMP---
>UniRef50_A8H661(109-298:305) Pseudouridine synthase n=7 Tax=Shewanella RepID=A8H661_SHEPA   E=7e-13 s/c=0.40 id=32% cov=84%
----------------LFDEEQYSVWYKPFGMRCQGSKWSDHTTiNRFIETQLTPPRnAYIIHRLDLAATGLIVLGHTKKVTAAIAQLFETRALDKFYQVIVEG--KFPEGQVTINTDVD-------------NKKALSHAHILEYNSElNQSKVQVKIESGRKHQIRIHMASLGHPVIGDRQHGN--GSDLTPNLQLTSCHLSFVCPVTGEDKVFELP---
>UniRef50_Q7VI26(91-310:351) Ribosomal pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI26_HELHP  E=7e-13 s/c=0.35 id=33% cov=89%
---------------IVYQDEDVLIINKP------PHLVIHHAPSVKEPTLVDWLKLNAhilytlsgeerygiIHRLDKQTSGALAIAKSNLAYTTLTKELKSRQMGRYYLA-IIDTPLKDNQQVQCFMGRNPHNRLKmSKIHIRSNSPIpkgvrDSKSSFIKIAtSDNGAfeLIAIKLHTGRTHQIRAHLESLSRHILGDTLYGyKPQAKThyYQDRILLHAYILYFIHPKTQQNCTFKAP---
>UniRef50_UPI000197A463(76-294:310) hypothetical protein HcinC1_08895 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197A463  E=7e-13 s/c=0.35 id=34% cov=91%
----------------LFYNDDFAIYDKPHNLLTHPkGRFFHYSLNDILK-SRFGIQANALHRLDKQTGGLVLCSINPKSKKALESLMQSRSIAKSYCAIVEGRVK-AEILINEPIMTQkhKGDLAIKSIVSEKGKESRTLIRPLAYYKDSTLIHAL-ALTGRTHQIRLHCSYIGHRILGDplygvsedksRFYleapnLSPkEHKALfdAPFLCLNAYALRFSFQ--GSDYHFKSNAPF
>UniRef50_D2M3P6(23-268:300) Pseudouridine synthase n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M3P6_RHOPA  E=9e-13 s/c=0.31 id=40% cov=84%
---------------VLYRDGLMLVIDKPPGLPVHRGpkggpNLEASFDALRYGLPRPPVLA---HRLDRDTSGCLVLGRHRKATATLGLLFKHSRISKTYWAIVEGGPAEDEGSIDLPIGKLNAERGwWQKIDQESGLPSLTKWRVMGRSSppvcgdgsgvgahsgtpslgrphpgplpqagegalsagakgDDLSRkpgaksgapppaqltwLALEPITGRTHQLRVHCAAMGWPIFGDNIYGN-GPRFGEPRLHLHAREIVI-----------------
>UniRef50_Q7NAY8(81-303:330) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAY8_MYCGA  E=9e-13 s/c=0.34 id=30% cov=88%
----------KPELDLIYEDENLVIFEKPLGIPAQQTDEPSQYDHMQNRLvhylvksnQYDYLNNQAylpsiVNRLDTYTTGIMLGAKNLKAQQALNQIIKNRDLKKFYHCLVHGEINPKKATLTAYLTKD-PNRSLvsiQKEKTNDNKIIITRYQTLYYfKKQNYTLLDVELITGRTHQIRAHLASINHPVVGDYKYAKKQYQNNQGNFkhqLLHSYKIIFD----------------
>UniRef50_A1KNV2(87-285:305) Pseudouridine synthase n=13 Tax=Mycobacterium tuberculosis complex RepID=A1KNV2_MYCBP  E=1e-12 s/c=0.38 id=36% cov=88%
---------------VLHQDADIVVVDKPHFLATMPrGRHVAQTALVRLRRELGLPELSPAHRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLAR-----APVAPGLALPRLVRSRIVKRrghlQAVC-EPGVP-NAETLVERIARDGLYR--LTPTTGRTHQLRVHMAALGIPIMGDPLYpnvISVAAHDFSTPLQLLAQRIEFDDPLTGSHREFAS----
>UniRef50_B1VEM5(96-303:313) Pseudouridine synthase n=3 Tax=Corynebacterium RepID=B1VEM5_CORU7   E=1e-12 s/c=0.36 id=32% cov=90%
---------------IVFEDDDLLIVNKPANIaVHVGSGVKAGVIEALRVLRPEDKELELAHRLDKETSGLLIVAKNSKMLRHLQSLLREgGEDIQRYYLAVAGGVLKKSGkqarRIDAPL---RKTGAATVVDRRAGQQAETKLWVKKPWGRAGTLVEVQLLTGRKHQIRVHLQHLGHPIIGDSRYGDKAANQAAAEkgvrmLMLHASRLVIPLPS-GEELDVQAP---
>UniRef50_C9L5B3(29-234:244) Pseudouridine synthase, RluA family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5B3_RUMHA  E=1e-12 s/c=0.37 id=34% cov=89%
--------------TVLYEDKYILVCQKPAGFPVQSKRLGTLD---MECALRNYlakkgqePYVAVIHRLDQPVQGVLVFAKDKESAAKLSKQMQQGKFEKTYLAYTQGHTDKKqETLID-ELEKDGRTNTSKVVAKKTAnsKRAELSYKVLKETEEGSlLEVSLK--TGRHHQIRVQLAHAGLPIFGDAKYNVKCTKEDANHgVSLCAYKLSFLHPAKGKKMEFQ-----
>UniRef50_C3PKB5(129-339:353) Pseudouridine synthase n=7 Tax=Corynebacterium RepID=C3PKB5_CORA7   E=1e-12 s/c=0.36 id=35% cov=87%
---------------ILFEDEHLLVVDKPPFMATMP-RARHITETATVRLRRKTGNNElsPAHRLDRLTSGILVFTKDRSVRGAYQTLFAERRVTKTYEA--------IAPLADVSPGTVWRSRMEKTPGELQGRIVEGEvnaitevaavepidkapYESIHGSLPELAKYTLKPQTGKTHQLRLHMLQAGVPIIGDPIYPvifPAEAEDM--RIPMH---LTATHISFVDPLTAR-PREF
>UniRef50_A8SBU6(1-216:231) Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBU6_9FIRM  E=1e-12 s/c=0.35 id=41% cov=84%
--------------MILYEDAALVVLDKPAGLSSeegVPAALRAHWNA---------PDAfvGVVHRLDTGVSGLMVYARTPAAAAALSRQVTQSQDAyavqdgraegkaaapqfvKQYRAIIAGAPDaqlPAAGVLRDYLFKDsrkgrvFPvSRPRKGV-----REAVLEYRILATAGENSlAEITLH--TGRTHQIRVQFASRRHPLYGDGKYGSRQKGSIA----LQSCGLRFVHPDTGKPMAFSLP---
>UniRef50_C8RQ24(61-256:297) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RQ24_CORJE  E=2e-12 s/c=0.38 id=38% cov=83%
---------------VLYSGSDAVVVDKPHGLPSTPnGRLLRATAQSLMRVRLQEPELVAAHRLDRDTRGLLVLARNPVTRGFLQTQFQRREVSKTYQALAADIPEIGSQWQDVQLpMLKIKDDPQVKVVdgersrltvtriRKLASSAGAEARPVEAtrAGTPTAVYELQPLTGYTHQLRVLMNHLGAPIYGDDTY--PEYRPGAGALRLRA----------------------
>UniRef50_Q6A5E7(78-287:295) Pseudouridine synthase n=4 Tax=Actinomycetales RepID=Q6A5E7_PROAC   E=3e-12 s/c=0.35 id=36% cov=89%
---------------ILYSDERILVVDKPHFLSSIPrGRHVLESVVVRLRTQLGLPELTVAHRLDRVTAGVLLLTRERKWRRPYQEIFERREVVKKYrlVAPVVHDPA-GEGVTATK--SGWQVR--SRIIKERGILQAREVPGVPNAVTDIALIGehggwglyeASPRTGRTHQIRLHMQRLGAPIVNDPFYpvvlDTPVDDFTHP-LQLQAWRMGFTDPVTGDPRAFTS----
>UniRef50_UPI0001BCD7D0(60-268:283) hypothetical protein AmarD1_17996 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD7D0  E=3e-12 s/c=0.36 id=34% cov=92%
-------------LTVLHRDERLVVVDKPAFLSTIPrGRHVAQSVVVRLRDELGLPELSPVHRLDRVTSGVLVLTTERRWRGAYQGMFQHRRVHKAYRAL-----APLRPDLELPLTVRNHLRKDRGAWQVTVDPdAQPNAEtLVELDAVVGGLGVyrLTPRTGRTHQLRAHLCGLGIPIVGDPLYPAvleVDVDDFSTPLQLLAHEVSFTDPVDGGERRFTSRRD-
>UniRef50_C1E0I0(74-303:318) Predicted protein n=2 Tax=Micromonas RepID=C1E0I0_9CHLO   E=3e-12 s/c=0.32 id=35% cov=89%
----------------LWEDEHLAVVSKPAGMLTHPNEasggatrtlvealLDAFGDEGLSAINGADARG-IVHRLDKPTSGAMLVAKTDLAHAMCVAAWYQRKVTKTYLALVEGVPGRRRGRRRGDD-----GDAMEGTCVapADGRPARSDWRVVETFGEEdgddaeqlCSLVEVTPRTGRRHQIRQHMgMALDAPLVGDPLYrrgKRPNTPATAapflvgkpgSVLFLHSAALALRHPVTGEALSFSDP---
>UniRef50_B9YDX4(79-284:295) Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDX4_9FIRM  E=3e-12 s/c=0.36 id=30% cov=88%
---------------ILYEDELILAVSKPAGMIVHPdnkGKTGTLANAVAAYYLRtgQHCTVRPIHRLDEGTSGIVLFSKCPFFQPKLDQALAQKQIARTYLAVVSGVMKPKDRLtLDKPIGRDRHNAKAYRIS-PTGKPAVTHVEVLRCRQKEKQTLVRCQLeTGRTHQIRVHLASIQRPVVNDPLY---NPRPVQGRMKLHAWKCAWTDLVSGRQV--------
>UniRef50_UPI000050FD43(98-324:332) ribosomal pseudouridine synthase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FD43  E=4e-12 s/c=0.33 id=33% cov=89%
-------------ISVVFEDDDLLVVDKPHFLASTPnGRF--VRECVVTRARLDFDQPDlvAIHRLDRVTAGLLILSKRPETRGRYQRLFQDRLVTKTY--RALAAMPPAD--LELPLVKESrlvKPRGGRQVLEVEGEP--NAFSKISLLGERTppsprwsdateppprrsvgecpsiGEYQLEPLTGKTHQLRVHMNSLGLPILGDPVYPvdrAPDPYDFSSPLQLLAASIGFDDPLTGRPRRFES----
>UniRef50_C7RAZ2(74-300:305) Pseudouridine synthase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAZ2_KANKD  E=4e-12 s/c=0.32 id=31% cov=94%
---------QEPTIpfaeMIIEHNEHFLIAYKPHFLPVMPGGVFVNECLQQRLIDKTgNPNLQAVHRLDRDTAGLVMFSTNPHTRSDYHQLFAQQNIKKHYQA--IAKTQAGESLSGKSWhIKNYLARSEPQFIFQNldtspddtsphDKDAQYAESLIHCEDDNlqLGLFTLSPITGRTHQLRLHMMSLGFPILNDRFYPSlqpKQADNFSQPLQLLAHKLSFIDPVSKEPRAFTSP---
>UniRef50_A6DMG7(9-207:246) tRNA pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG7_9BACT  E=5e-12 s/c=0.37 id=34% cov=83%
----------------LYEDEYLVVAKKLAKISVHRSEMCRDRRTLLTMVRNKLggQYVYAVHRLDRPVSGPLLFAKSPEMCRELQKQFNEKTVEKKYIALVRGWLE-GKGKVDKQLlkksngtIQDCLTRYRGLATAEIDEPL-GKFPTVRYGL-----VELEPVTGRYHQLRRHMRDLAYPIIGDstdgdshqnRFFRE---KFELRRLMLHCFYLSFKHPV-------------
>UniRef50_A2U235(3-220:234) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A2U235_9FLAO   E=5e-12 s/c=0.34 id=31% cov=92%
-------------LEIIYEDAYLLCVTKPNNVLvhhAYHSRNMADEKSLLQLVSEEtglkvYP----IHRLDRKTSGAILLAKEKEYVAKFQDLFTKNQIQKIYYGVVRGF-SPSTKRIDSPVKGRDANVHKEALTeLKTLAKITLDIAVKPYDSSRYSLIELFPKTGRMHQLRVHSNKISHPLIGDAKYGDKNHDMMFEQnfgfknLFLHAGKLEFIHPYTQETLILKStfPTDW
>UniRef50_C0QPR0(73-262:272) Pseudouridine synthase n=4 Tax=Hydrogenothermaceae RepID=C0QPR0_PERMH  E=5e-12 s/c=0.39 id=33% cov=83%
---------------VIYEDQFILAVQKPPFLESegRKGSVEYQLRKVLDR------RLKAIHRLDRETSGVLLFAKNEKIFHRFKDLWHRKEVVKVYLSISYGEAKFKKKVVNMPV-----DKKYAKSIFFTKKISKgfTLFEV-------------EIKTGRKHQIRIHSSKIRHPIVGDKIYGLKKVEdpltKNVKRQMLHGYRLRFLHPFTGKVVDIKAPVyhDF
>UniRef50_D2VX88(2-263:272) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VX88_NAEGR   E=6e-12 s/c=0.28 id=35% cov=86%
-----------PNIPIIFKSRDVLVIDKPND-LHIDG---DYELTVEKLINNYYPEMENpleeiqhkpghtpsrrklkfCHQLDYATSGILCLAFTRESCAKITYPFQQRTAQKQYLAVLRGHVLINDFEI-LTFIGEDPSdeRKFRMRNFYLGREKtllselNTEEEIQEakksresltfgsvlcrgfYHKDNdtipVTKVLLRPKTGRRHQLRLHTQLLGFPILGDATYSllGRDGEEGVHRMMLHAWNLTLP----------------
>UniRef50_A1WL43(102-304:314) Pseudouridine synthase n=12 Tax=Proteobacteria RepID=A1WL43_VEREI   E=6e-12 s/c=0.36 id=34% cov=89%
--------------TLLHQDPHLVVADKPHFMPVTPsGRYLQHTLLVRLKRQLGLPQLSPVHRIDRDTAGLVLLSVQQCTRGAYQALFRERRITKHYEAI-------APWRADVVFPRDHTSRiepgPQFFRMQEVPGPpnSHTHMQLLAVAGD-WAHYRLSPSTGKRHQLRVHMAALGLPLRNDPFYPvvdDPPPGDYSRPLQLLARALEFVDPLSGERRVFES----
>UniRef50_C7H1V6(3-231:253) Pseudouridine synthase, RluD n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V6_9FIRM  E=7e-12 s/c=0.32 id=41% cov=85%
---------------ILYEDTALVVLDKPAGLTSeegVPAALRQ-------RWGRPDAYVGVIHRLDTGVSGLMVYARTPGAAAALTKQVTESQQAyaildgrveagpgapaqpcflKTYRAVIAGGPDeqlPPEGILRDYLFKDsrkgrvFPvKRPRKGV-----REAVLEYRIVETAPDGSlslAEITLH--TGRTHQIRVQFASRKHPLYGDGKYGSRFKGDIA----LQSAGLQFVHPETGEKMAFqlekpiKAPWD-
>UniRef50_C6JLM4(69-258:289) Pseudouridylate synthase n=2 Tax=Fusobacterium RepID=C6JLM4_FUSVA   E=1e-11 s/c=0.38 id=31% cov=84%
--------PMEIPIKVAYEDKNILLIDKEPYIIVHPTQKKVDKTlangvvNYFLKTTRKIMVPRFYNRLDMNTSGLIIVAKNSYAQSFLQEKGI---VNKFYKAIVKGIIEKDEFLIDKPIGKVGDDLRRREISVENgGQEAQTKIKVIKRLKDLTL-IEAELLTGRTHQIRAHMALEGYPLLGDELYGGEDKR--AKRQMLHS----------------------
>UniRef50_B7VGV5(32-225:270) Pseudouridine synthase n=17 Tax=Gammaproteobacteria RepID=B7VGV5_VIBSL  E=1e-11 s/c=0.37 id=36% cov=81%
-------------FDILLNHSDFLLINKHPG-VSV------HKDDGDTMLLQEVAKAINepklylVHRLDKMTSGILLLAKDAPAASELSQLFAKREVEKYYLAIGSKKPKKKQGLISGDM--ERSRRSSWKLLTTKENPAITQF--LSATAEPGERLLLcKPYTGRTHQIRVAMKSIGSAIVGDPIY-NPSNE--ADRGYLHAFAIRFT----------------
>UniRef50_B5EI85(85-287:293) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B5EI85_GEOBB   E=1e-11 s/c=0.36 id=34% cov=89%
---------------ILFQNDELLVACKPHFLPVTPGG-EYLSQSLLHRLRESTGIHDLVplHRIDRETAGIVLFSANPKTRGRYGELFREGSIEKSYeaISAAPVEPGQAEWLVENRLVH---GEPWFTMRTEQGPPnARSLIRLVE-QRDGAARFQLTPVTGKTHQLRVHMSGLGLQILHDRLY--PQLQPQQPDdfdrpLQLLARRVRFRDPLSGRLLEFES----
>UniRef50_A0KLM3(4-200:219) Pseudouridine synthase n=2 Tax=Aeromonas RepID=A0KLM3_AERHH   E=1e-11 s/c=0.37 id=37% cov=85%
---------------ILAQHKDFMVINKGPGL----GMHDETDEAgllhpgLVSRVKADtglllYP----VHRLDKMTSGLVLLARTTEANRALSMAFAAREVSKQYLALSDRKPKKKQGWVKGDM---QKGRGGSWMLTRTlDNPAISWFDSVS-VREGLRLYRIKPRTGKTHQIRVALKSVGAPILGDARYGGTA----ADRGYLHAWRLAFTLA--GEAFDFVCPPD-
>UniRef50_C0R003(11-220:241) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0R003_BRAHW   E=1e-11 s/c=0.34 id=36% cov=88%
--MSNYINP-------IYEDNHIIVAVKPP---NIPTQGDITGDVSFFENIKDYIKIKYnkkgnvflglVHRLDRPVSGIIVFAKTSKAASRLSEAIRDRKFEKTYYAVVNGILLEKEAKLENYLIKKTNKLGNiAQVVFENTKNAKIaklKYNVIkEDVIKNLSLLRIELETGRFHQIRVQLANIGHVIYGDRKYGSyiKYDRNDVP-LALFAKSLRFPHP--------------
>UniRef50_B8DML1(150-369:393) Pseudouridine synthase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DML1_DESVM  E=1e-11 s/c=0.33 id=40% cov=81%
--------------------EGLLVLLKPAGLAVQPG--TGHDDCVTARLAAQYAGADFLptpaHRLDRDTSGLLLVATSYARLRALSDAFAAREGlVKEYLAWVAGR-WPHEGartLHDRLEKQGAPGRQKvRRVGGEGSVPrAASGNEAVRVESgtdaahaaagadagrhaactvtplrrgDGASLLLVRLHTGRTHQIRVQLAERGHPIMGDRKYGGP---ACGQGMLLHAVRLTL-----------------
>UniRef50_B8I5R6(73-278:303) Pseudouridine synthase n=2 Tax=Clostridium RepID=B8I5R6_CLOCE   E=1e-11 s/c=0.35 id=29% cov=88%
-------------FSVVYDDDNLLIVNKETGIPVHPDK-NQKEATLIDKLQSIYgPNLALCHRLDRNTSGLVIIAKNPATLEVMLEKIKNREIQKYYTCIVSGKMEKKNAeLVDyleknekLSRVFINPEKTRNSV------QIITRYRIL--ASMNSLNLLeVELVTGRTHQIRAHLAYYGHPIIGDGKYGknAENKQYNAKYQLLCASRLTFNFQSSARHLNY------
>UniRef50_C3XCW5(91-296:319) Pseudouridine synthase n=2 Tax=Oxalobacter formigenes RepID=C3XCW5_OXAFO  E=1e-11 s/c=0.35 id=30% cov=92%
------NPFQE---TVLYQDDWLVVADKPHFLPVTPsGKYVSETLLVRLRKKLGIDTLTPIHRIDRETAGLVLFSVKPEGRNLYQRLFRE-----NFVSKHYEAIAPYRDDIAFPMryrsrIEEGDSFMRMRVIPDGTPNAETEIS-IQQKSNAFAHYHLKPVTGRKHQLRIQMCSLGIPLLNDRIYPVHLPEAVTDE--MQAEEFRYPLQLVAKSVSFKDPV--
>UniRef50_C4XFS9(84-295:315) Pseudouridine synthase n=2 Tax=Mycoplasma RepID=C4XFS9_MYCFE   E=1e-11 s/c=0.34 id=31% cov=90%
-------------LDIKYEDDDLVIINKPSNLVVHPSP-GHYNDTLVNGLLYHFKNNLSnengllrpgiVHRIDKDTSGLLIIAKNNKMHNSLTDMLKRHEIERSYLAIVRGLIENPLTKINLPIARNTVDRKMMSV-HKEGKEAITFVHLLKhFYLDkepmSLVRCELK--TGRTHQIRVHLSYIKHPVYGDPTYGKS-VDEFNQR--LHAYKLKFIHPLTKKEICVYAPV--
>UniRef50_Q5ZT70(91-298:317) Pseudouridine synthase n=5 Tax=Legionella RepID=Q5ZT70_LEGPH   E=1e-11 s/c=0.35 id=30% cov=91%
---------------IIFEDSSLLVINKPAGIAVHGGSgLSLGVIEALRKTRHDLSYLELVHRLDRETSGCLLLAKKRSTLRAIQALLEAREVQKIYWALLthrW--DGKKKITITAPLEKNTLKSGERVVSVQKdGKASETDFKLLE-NYHQACWVEASPKTGRTHQIRVHSAYFGHVIVGDEKYGAKVGEVegidyQQNRLYLHAR--SIQFNLNGVMHVFQADVD-
>UniRef50_B1C3D3(87-294:310) Pseudouridine synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3D3_9FIRM  E=2e-11 s/c=0.34 id=29% cov=90%
--------PQEYPLSIAYENDFILIVNKPINTTIYPETKKE-LNTLCNYVANYYLETNQyllirhIHRLDKDTTGLVLFCKCPLLQPILDNMMANKLIKRSYIA-------ICKGIIDHDLTINRDiarDRHVNKMrITNKGLKAITEIKIIKHDKQKNYTVCKCDLkTGRKHQIRVHLASINHPLLSDPLYGNKS--KLIDRLALHAYKLEFIHPVTKQQIIVKA----
>UniRef50_B0N6U2(92-292:328) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0N6U2_9FIRM   E=2e-11 s/c=0.36 id=32% cov=82%
---------------VLYEDKHVLIVFKPAGLLvhedaneSINTLTNQVLSYLASKNELDLSRENTfmpgpVHRLDRNTSGIVIFGKTLAALQNLNEMIKQRHCiEKKYLTICRGQLNHQRNL--HGYMIKLENQAQVKLVKKDYPGALTMETIVrplKYNCD-YSLVEVTLITGRMHQIRVHLSSIEHPIIGDRKYGDFELNKYIKKTfglnnqLLHA----------------------
>UniRef50_C0GQU7(80-291:318) Pseudouridine synthase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQU7_9DELT  E=2e-11 s/c=0.34 id=32% cov=92%
------DPQRAGELQIVFENPDFTVLDKPAG-VPVHSGTSARRDNMVLRLRKHYAGADFspalVHRLDKETSGLLLAAKNYAWLRRIQAMWNKNLVEKTYLA--WVHGSWPSRWVNLEhrLIKTF---EKMQPSPE-GRPALSRVRSIASSRDKTL-VQIRIITGRTHQIRTQLSLSGHPVIGDGKYGKDSGYA---EMYLHAYMLAWPGHVFclppGWTGDFTTPGD-
>UniRef50_Q6KHW4(73-283:298) Pseudouridine synthase n=1 Tax=Mycoplasma mobile RepID=Q6KHW4_MYCMO   E=2e-11 s/c=0.34 id=28% cov=91%
---------QNINLDIVFENEDFLIINKRSGMVVhpAPGNMQ---DTLVNALLFHFKNNLSningeirpgiVHRIDKDTSGLLLVAKTNEAHNYFALLLKKHQIERKYQAIIVGKMDHTITNINLPIGRNTSSRLKMEVTAHNSKEAFTKITSLK-ASETHSLIQCELKTGRTHQIRVHLAHINKPIYGDNIYG-KKVDDFNQR--LHAYELSFTYKD-NKQYSFNVP---
>UniRef50_D2MPF1(7-208:225) RNA pseudouridine synthase n=1 Tax=Bulleidia extructa W1219 RepID=D2MPF1_9FIRM  E=3e-11 s/c=0.35 id=32% cov=88%
---------------IIYEDNHLLVVEKPVNVLSQADNSQE--DDMVSRLKklikiRDQKPGQVfiglVHRLDRPVGGLMVFAKTSKGASRLSDSIRCHTFKKIYLAIVDSVSLPQEGTLEDYLYKDSQKNRVFVVDAKKGKLARLHYQVLaKKRGKSLVRIVLE--TGRPHQIRVQFASRNWPLVNDQRYHPHPNRG---SICLFAYQLSFPHPTKREEISFQ-----
>UniRef50_A4CLQ5(11-220:236) Pseudouridine synthase n=16 Tax=Bacteria RepID=A4CLQ5_9FLAO   E=3e-11 s/c=0.34 id=33% cov=89%
-------------LMVLYEDNHLIAVSKRAGDI-VQG--DKTGDTPLPETVKDYIAHKyqkpgkvflgVVHRLDRPTTGVIVFARTSKALSRMNRLFAEGGTRKTYWALVGTPPPETAG-----RLVHWLERnQKQNKSYARAKEVpGSKQAILNYrllgSLDRYHLLEIDLETGRHHQIRAQLAAIGSPIKGDLKYGFPRSNPDGG-IHLHARRLEFIHPVRQDPVSILAP---
>UniRef50_B1ZYD0(20-251:255) Pseudouridine synthase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZYD0_OPITP  E=3e-11 s/c=0.31 id=34% cov=93%
---------------ILERDpNGLLALSKPAGVLSHPNEGKDQPRSLLTchfdAVAECYvwtPEGAAtsqrwwlLNRLDSATSGVILLAANEELAREIRAQFKRKQVTKVYQALVFGKpPRPVELWRDVVAVTK--QGGQIRTTAGAGRvPAECRMSVVRsrgVGEGALALLQLEPRTGRSHQLRVQCAKRHVPIVGDQTYGDFRhnrefaKRTGEKRLFLHSLATRFEYAWKGRTHVFAAqaplPAEF
>UniRef50_C6LHC3(91-334:342) Ribosomal large subunit pseudouridine synthase, RluD family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHC3_9FIRM  E=4e-11 s/c=0.29 id=32% cov=97%
--MSHLIPEKHP-LHILYEDEDLICVWKEAGMVLHPAH-GHYSDSLANYLQgylagkGGQEQVRGIGRLDKDTSGIVVFARNRIAAARLWQQRQSGRFQKEYVALCEGvFPDEAyerEQTIDAPIQKVTGEKNKMCIVQERCCPAAGCFAVTHYRAisekescfheamrllsagdlpgpEQASLVRLHLETGRTHQIRVHMAYIGHPLVGDAVYGRGIAGQTCAKLC--AWRARLVQPFTGETILLCPPA--
>UniRef50_D2Q929(37-259:264) Ribosomal large subunit pseudouridine synthase D n=19 Tax=Bifidobacterium RepID=D2Q929_9BIFI  E=4e-11 s/c=0.32 id=34% cov=91%
---------------VLYEDDGIIVIDKPHFLATTP-RGMWYRETALIRLRERYGEPDIVpaHRLDRLTAGVVVFVRKPELRGAYQMLFQEHRTVKTYECLAPLAPvvRPRYGTVTrIDRNQPFPLVRRSHIAKDRGRlqayeiPAAVNAESLIERGDNpriidgnvVINYVLHPKTGKTHQLRVHMNSLGLPILGDVFYPDVIQRpydDFSRPLELVARRLEFDDPVTGESRAFVS----
>UniRef50_A6DHD2(95-317:328) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHD2_9BACT  E=4e-11 s/c=0.32 id=30% cov=89%
---------------VVYEDDDILMVEK-TGDLPVHPAGSFFKNTLWYMLVKQFGNVHIMNRLDRETSGLVLIARHHKAASVLGKQFERRQVGKEYDVLVEGLVSwdqyDALGYMG-PAV---SSKIRKKFSFteaedwqDYGKhSARTEFSVLRRSHE-LSHLHCRLHTGRTHQIRATLLSLGFPLVGDKIYGLDEQFFLSfidgalteqdyqkmrlRRQALHCSLMSFTHPMSGEDVVFES----
>UniRef50_C3XMA2(92-284:290) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XMA2_9HELI   E=4e-11 s/c=0.37 id=32% cov=83%
----------------IFCNENILALEKPAFLTS-----EE--------IVKSYPQWTLLHRLDKETSGILLLVKENSSfHLKAKEAFKQLQVLKQYTAIVEG-ILDEECEITAPLIIKKGKSAKVSISKTNeGQKAITHITPLEIFGKKT-KLDIEIKTGKTHQIRAHLAHIKHPIIGDTLYGAKPAN----RILLHARHIAL----LGYNFTSNEPKEF
>UniRef50_B0D7R4(30-236:321) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7R4_LACBS  E=5e-11 s/c=0.34 id=33% cov=84%
----------------LYVDPAVAVVTKPHGLVCqlihrqLPAGRVNHFNVMMQDLKAHlsletfpYP----VHRLDKSTTGAFLLALTESSARQLSQQFQKRTVQKTYLALVrGGEKSFPEKFGEIRTTLNKVDGYPEVDLSSQGQPCATDWKLLASSPIAPISLLeLNLLTGYKHQLRVHLAKCLHaPILGDAQYSkKPLSSAITdvvkipeDRIFLHASEISF-----------------
>UniRef50_C7R188(125-344:362) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C7R188_JONDD   E=5e-11 s/c=0.32 id=34% cov=90%
--------PEVPFACdVLFEDDDLYVIDKPHFLASTPkGRYVTETALVRLRKDTGNPELSPAHRLDRLTAGVLV--FTK--RRELRGAYQELFAQRQ-VTKVYQAVAPTNPAVDLPATV------RSRIVKEHGimrahtMPGEPNTETLvtltdtatlpaghDVAVQDVGLYTLYPHTGKTHQLRIHMASLGLGIVYDNYYPDfyhVESDDYRHPLQLLSSQLAFTDPLSGVQRDFRS----
>UniRef50_A5EXY5(94-288:313) Pseudouridine synthase n=2 Tax=Cardiobacteriaceae RepID=A5EXY5_DICNV  E=5e-11 s/c=0.36 id=35% cov=84%
---------------VLYEDDHFLILNKPAGIVVHGGSGHEFGviDVVRSIWGENY--AELAHRLDGDTSGVLVLGKHRQALNAFQTAMNEGTVEKRYWALVDGVWTREEAEVVVHLTKAPLNvREKMQVSeLENAQFARTWFYVLQRWQDATlMEAVLD--TGRTHQIRVSAAHCQHAIAGDKKYGKREFNDLVRKkgfhgLFLHAREIKF-----------------
>UniRef50_A1V9V4(125-319:390) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1V9V4_DESVV  E=6e-11 s/c=0.36 id=37% cov=81%
--------PARPLPPVVAETPDLFIFDKPAGLAVHPG--TGHTDSLTTRLAQHFAKApfmpTPAHRLDRDTSGLLLVARSYAMLRTLHEAFASHDAlVKEYLAWVAGCWQPAAPVT----LHDRLSKGAEASGFER---VASDDEGAEAAC--TVRCLLREQhrslllvtlhTGRTHQIRVQLSRRGHPLLGDRKYGGP------PRMggfLLHAVRLCL-----------------
>UniRef50_A3QIB6(96-309:313) Pseudouridine synthase n=4 Tax=Shewanella RepID=A3QIB6_SHELP   E=7e-11 s/c=0.33 id=33% cov=91%
---------------ILYLDEQIVLANKPHFMALHPGG-EVINQCLINRL-RERTGCETLiaaHRLDRATAGIVLLVKQSDSRDAYHGLFRHGQITKEYQALARLTPElLAEyhaGKLSLPRRWTVKNRIDKGTPSFTMRivdgEANSHSEIALVSVEGeIGRFELMPITGKTHQLRLHMNSLGMPILNDNFYPTllpRSAEDVAQPMKLLARRLAFTDPVTGRKLDICLP---
>UniRef50_A4BGF0(83-295:309) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BGF0_9GAMM  E=1e-10 s/c=0.32 id=31% cov=95%
---ENPNEPDIPFDAdILYEDEQILVVDKPHFLSTTPvGQFMKHTVTTRLRNRTGNMAITPAHRLDRATAGVLLLTKQRAVREAYQSLFLRREVEKTYHALCHPNPElPEQFEINLHLKENTDN----MFVRVLDAPPNSHTSAKRLARHSTGDLYeLRPSSGRKHQLRCQMAHLGAGIVNDIWYpvaQDPSPDDFSRPLQLLAKKLAFIDPFSGQRREF------
>UniRef50_A8SS78(8-222:238) Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8SS78_9FIRM  E=1e-10 s/c=0.32 id=30% cov=92%
-------------LNILHEDSDIIVAVKPCGVPTQPDKTNSESMVSMLKLriyerenRKEEPYLVPIHRLDRPVGGVMVFAKTPEAAAALSKQSEDGTMLKYYQAILTGELPNDQGVLKDYLLHDTKDNVTKTVDKDTpgAKYSELEYEVLDVMDTDEgvlSYVLVELITGRHHQIRAQFAKRKCGIWGDTKYnpKFQKTKKKYKEIGLHASRLEFDHPTTGEHMVFK-----
>UniRef50_C4Z0B5(84-280:333) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0B5_EUBE2  E=1e-10 s/c=0.35 id=30% cov=81%
-------------LDIIYENSDVIFINKPSGMLSQKAKPEDvslveyliahliHKGELNAGDLASFKPG-ICNRLDRNTSGIVAAGKTTKGLQQLSEAFKQRTLGKYYLCIVKGNVDK-RALIKGYLYKDNKTNKVTISRTETKDslPIETEYIPV-CSNGNVTLLKIHLLTGRSHQIRAHLASIGHPLIGDYKYGQKSVNDTFNR---------------------------
>UniRef50_C4XN86(117-321:339) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=C4XN86_DESMR   E=2e-10 s/c=0.33 id=32% cov=90%
-----------PALEILHEDDELLVVVKPAGLPVHPG--SGHTFALTTLLHAHAPHApfkpTPAHRLDRDTTGLLLVAKSYRRLRALHEAMQDGTLRKDYFAWVWGKWLLGEenewvTMRDALAKSGGPGR-ERVTAGEDGKEAVAKVRLISRAP-TASLVEVRLETGRTHQIRAQLASRGYPLVGDAKYGG----GPTP-LRLHAWRVILPEEAYCVPPDWEAP---
>UniRef50_Q9ZL98(80-293:327) Uncharacterized RNA pseudouridine synthase jhp_0682 n=15 Tax=Helicobacter RepID=Y745_HELPJ  E=2e-10 s/c=0.32 id=29% cov=89%
---------------VIFEDEDLLVLNKPPNLVV-------HKApSVKEPTLVDWLKSQNyelsnlglkerygiVHRLDKDTSGGIVIAKNNFTHVCLSEQLKTKMMGRYYIA-LLSTPLKEEKMSVECYLTRNPNNRLKMIALKAAKKEKSRYSKSEFTSLLTSQngmdlIGAKLFTGRTHQIRAHLEYLNRHIIGDNLYGLNGVLSKEEiRIMLHAYLIEFKHPRSEQKLRFKVP---
>UniRef50_B1ZUV5(43-259:279) Pseudouridine synthase n=2 Tax=Opitutaceae RepID=B1ZUV5_OPITP   E=2e-10 s/c=0.31 id=35% cov=88%
---------------IVHEDERLLVVAKPGDVVCHPSKAGPW--SSLVGAVREFTGLATVHlvfRLDRETSGIVVLAKDPKTASRLQVAMQERKIGKAYVAILTGAmREPVT--VDQPLGDDVASPVFVKSAVRAdGQRSVTHFSPITVAADDAfslVRVVTE--TGRKHQIRAHAQWLGHSLVGDKIYG-PDARCyldfidtgwtpaladklLLPRQALHCAEIDLTR--TGLAHVFRAP---
>UniRef50_C7H3U7(80-267:305) Pseudouridine synthase n=2 Tax=Ruminococcaceae RepID=C7H3U7_9FIRM   E=3e-10 s/c=0.36 id=30% cov=84%
---------------VVYEDAFAVVLEKPPHLavhptLNYPRDTLANGYAAWAVAHGESPVFRPVNRIDKDTSGLVLAAKNGYAAPLLAEGV-----EKLYYAIVEGELPLGPGVIDAP-IGRRGDSIIGRCVTPEGKPSRTEYTILR-AAQGLSLAACVPVTGRTHQIRAHFASIGHPLAGDDLYGGHRDRIA--RQALHCARQSFRVPAY------------
>UniRef50_D1AL10(64-263:283) Pseudouridine synthase, RluA family n=14 Tax=Fusobacteriaceae RepID=D1AL10_SEBTE  E=3e-10 s/c=0.34 id=31% cov=89%
----NIKPIKIP-LDIVFEDEDILVVNKQPYLVTHPTKKKVDvtlANGIVYYFQEKYGKEmvpRFYNRLDMDTSGLIIIAKNSFTQAFL-QNF--GDVKKYYMALVHGIIKEEMINIEKP-IARVGDDLRRKILDE-GQYAKTVVKTIKRNEEkNITLTECELFTGRTHQIRVHLSNEGYPILGDKLYGDMDDN--VKRQMLHSYKVSFIHP--------------
>UniRef50_C4FZD3(117-334:353) Pseudouridine synthase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZD3_ABIDE  E=3e-10 s/c=0.31 id=33% cov=81%
---------------VIYEDRDIIIVNKPVNVLSqiaKTGDVSMNEWLISYLINSGSLTAEDmltvkpavVNRLDRNTSGIILAGKTLTGLRFLSDIIKTRKLTKYYLTIVKGeipNNFTAEAYL---LKNDNHNTVKiYKDKVEGAEYIKTAYEVLQ-VKDGHSLLKVELITGKSHQIRAHLSFLGYPVIGDGKYGLKSENTNYRRMGL------------------------
>UniRef50_D0WNY8(101-298:306) RNA pseudouridylate synthase family protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNY8_9ACTO  E=3e-10 s/c=0.34 id=31% cov=89%
-------------LDVVDGTDRWIAVDKPAGMATMPrGKHVAQTVTIAARRHFSNPEIVAAHRLDAATRGVLLLTLAKRWRAPYQMLFERREVRKAYLA-----VAPADDrFVEAQTVALALAKPRGslKALVVDGQPNAVTTVRLADERRGLGLYEIEPKTGRTHQIRVTMSHLGIPIVGDWLY--PEVRDGGDLQLLAAR-LEFVDPANGLEVALKS----
>UniRef50_B9L6B7(60-238:253) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L6B7_NAUPA  E=3e-10 s/c=0.38 id=30% cov=81%
----------------IFEDKNLLAVDKPPYITS-------------EEIAKNFGY-ELLHRLDKETSGVLILVKNDEFKKKAIEEFKKQNVYKEYIT--WVSGIVAEPMkIDLPIKVIKTKSGALAKISKDGEDAVTEIEpILAFRTKSKVKAVIH--TGRTHQIRAHLKAVEHPILGDEKYGGEPFK----RVMLHHHKFKI----FDYNFTSPEPSDF
>UniRef50_D2R795(73-324:341) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R795_9PLAN  E=4e-10 s/c=0.27 id=33% cov=94%
------KPADEKDVRIRHVDNHLVVVEKPAGMTTErhpeeknwPSRrkqLQPTLDEVLPRLLAKHlgwkipreaagsaaakgrrtqpapklPRIFAVHRLDRDTSGLMVFARTPEASTALIKLFKKHHVTRAYVAVV--HGTPVEQKIETYLVRDRGDglrgsSPAGKVAEEAQR-AVTHVRLMQTIGPYSV-VECRLETGRTHQIRIHLAEAGHMLCGEKVYThklgekSQRDESGAPRQALHAAELGFVHPITSEPLIWR-----
>UniRef50_A8L7E9(13-238:285) Pseudouridine synthase n=1 Tax=Frankia sp. EAN1pec RepID=A8L7E9_FRASN  E=4e-10 s/c=0.30 id=37% cov=81%
----------------IFEDEAVLALDKPVG-VSVMG---ERHDTDLVSMARDAGEElFPAHRIDKVTSGVVLFAKELRFHGDLTRQFNRRTVEKTYLALTRTRGLPALATIDLPLsvgrknrvriaanradIVAWPgpagtptpdgpaGTPGSDGPAGSGArspaswtvpaartfpnvrsyPSVTRIARVWEGAEHTL-VAAYPISGRRHQIRVHLAWVGHPIEGDPLF----DRAPVTRTFLHSWRLSF-----------------
>UniRef50_Q2JFI3(1-274:304) Pseudouridine synthase n=2 Tax=Frankia RepID=Q2JFI3_FRASC   E=5e-10 s/c=0.24 id=36% cov=89%
----------------IYEDEAILVLDKPVG-ISVMG--ERHDTDLVTLAGDDGEELFPVHRIDKVTSGLVLFARQLRFHGDLTRQFQRRTVDKRYLVLTRTRGLPASGTVDLPLsvgrksrvrvaanradimadlaevaplaeVADlgevaplaevaplaevadlgeaaplaeaaraevgptgagagagvgrWTVPPAAVFPHVRTYPSVTTFIRVWEGGEYTL-LAVTPVSGRRHQIRVHLAWIGHPIEGDPLF----GRDATARTLLHSWRLAFDAAwAGGSRIEVEAPpgADF
>UniRef50_A4QI08(97-313:322) Pseudouridine synthase n=5 Tax=Corynebacterium RepID=A4QI08_CORGB   E=5e-10 s/c=0.31 id=36% cov=88%
---------------VIHEDDDILVIDKPPYLATMPrGRHITETALVKMRVLTGNNDLTPAHRLDRLTSGVLVMVKKPELRGAYQTLFARREASKTYEAIAEFVP----GLLDNgPAI--WESRIEkergivQAFVVEGPVNARTELVSVTPVDDaeqsileemhgplpRQARYVLAPSTGKTHQLRIHMRDFAAPILGDPLYpvlhAVDDEDYTTPMHLI-ARTLTFVDPQTNEERTF------
>UniRef50_A4S7H5(44-307:318) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7H5_OSTLU   E=5e-10 s/c=0.25 id=43% cov=89%
-------------LLAVYVDDDVYVLNKPAQTyvhdierLVERGMVKcDDATTVDNRaTTRDVPfnaseSARVVHRLDRDTSGCLVVARNRDAIRSLSAQFADGTVQKTYVAlcaatadydgvedhrRVftgWGRAK--YGLFRLYDAADigraLPGNKKVKV-----KHAETTIIVERVITDGVAlrfcepptaddadrrrhRVALarcSPLTGRTHQIRLHCASLGLPLVGDVRYGGPiaatrdgpidapfSARRVAG-ALLHAERVAFRHPKSNLRVDVHAP---
>UniRef50_A8JB96(90-303:303) Pseudouridine synthase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JB96_CHLRE  E=6e-10 s/c=0.31 id=33% cov=91%
-------PPSPCHVDVVYEDADMVALSKPSGLQVLPAAM-FHQRTVLSLLRRrqylDVP--APVHRLGRGTSGCGAAALAALISSAPASGSGCQLPlRKFYRALVQGRVKADQGRVDVP-IGPIPHPGVDRGLFAAtpdGKPAASVWRAGCMEAECTLMEV-EILTGRPHQIRIHMAAMGHPLVGDPLYGAGGRPKVRYRLygsdcgyYLHSLELHLPHPITGQPL--------
>UniRef50_Q14NQ9(83-309:312) Hypothetical rna pseudouridylate synthase c protein n=1 Tax=Spiroplasma citri RepID=Q14NQ9_SPICI  E=8e-10 s/c=0.29 id=30% cov=95%
-----YNNVETLPLQVVYEDDNILVVDKPHG-VEMYSKFHTSLDAMVQHylIQKHeyHPEDEQsfvishVHRLDKLTRGLVLYAKNKITLDLLLAKINQKESiEKKYLAKCEGIIKETDFTLTGYL---YKNEDKQKMVFTKtvqphAKVVKTHFR-VQHQLTNATWLEVTLITGRKHQIRASLSYLHHPIVNDIKYGAKQ-ETKEYMIVLYATTLIFhqlpDHLSYLNEKIIKIPE--
>UniRef50_UPI0001BC3376(5-213:222) putative 23S rRNA pseudouridine synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC3376  E=1e-09 s/c=0.32 id=33% cov=90%
---------------IVYEDDNIIVCNKPVGMPSQSDRTFEQDlvSYVLThRTEQNEPAyAAIINRLDKPVGGLVLFAKNKKAAAGLSAVSGEHGIEKNYYALVKGSPCDKGEFTDY-LLKDGKNNISTVTDKDTkgSKKAVLLYEKLgEKTIDGEKYSLMRVrlLTGRHHQIRVQFSHHGYPLYGDIKYNSDfrNRRDVSPALF--AYHLSFKNPVGADRITVEA----
>UniRef50_Q1JXL0(83-287:294) Pseudouridine synthase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXL0_DESAC  E=1e-09 s/c=0.32 id=34% cov=84%
--------------TILYQDDALLVACKPHFLPVHPgGRYVTENLVYRLRLATGNDQLAPVHRIDRFTAGLVLFAQRSEDRARYNALFSQGNIKKRYDA-----------------VAHCPEEPQQRHWQVANRIEQGDpwfrWQVV--AGDVNARssielldlrqgyglFSLQPITGKTHQLRLHMSGLGFGLVNDRYYPNllPEQpDDFSTPLQLLAKEVIFTDPVTGKHHHFESP---
>UniRef50_B4UMB0(77-296:312) Pseudouridine synthase n=4 Tax=Anaeromyxobacter RepID=B4UMB0_ANASK   E=1e-09 s/c=0.30 id=32% cov=91%
-------------LSVLLERPRYLVVEKPAGVAVhplAPGEGGTLANAVAARhpeCAEASPeprEGGAVQRLDLETSGCVLFARDPEAWEALHAQLGAHTVDKVYLALAVGR-LPAGGVCSVPLaqrggrVVPAPDLEAEERLQARGlrpRPAETHYEPERRFADHTL-LRVRIVTGVMHQIRAHLALLGHPVAGDALYGG--AAAGLPgleRQFLHAWRLAFDDPDGAGRVAVESP---
>UniRef50_C6CYJ1(12-218:242) Pseudouridine synthase n=11 Tax=Firmicutes RepID=C6CYJ1_PAESJ   E=1e-09 s/c=0.32 id=30% cov=89%
---------------VLYEDNHIIAVVKLPG---IPSQEDETGDpDMLTLIKQDLKIRHNkpgnvflglIHRLDRPVGGAMLFAKTSKAASRLSEAVRSRTFGKTYVCVVHGKPAKQQDRLRHYIRKD--AKRNQVTVYKepaaDAKEAILEYRVCAQAG-GYSLIAVKLHTGRPHQIRAQMAYIGCPLVADRKYGAPNT-ASVTDIALWSTSVEAPHPVTKELQCFRS----
>UniRef50_Q73KM2(7-202:236) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73KM2_TREDE  E=3e-09 s/c=0.33 id=31% cov=80%
---------------ILFEDNFFAVVLKNCG---------DNSQVFFKKAFSEKKYAEAVNRLDKPVSGLVLIAFSPAMHTKLNNLFKEKKIKKEY----WAICKKIEELksaADSKISDTTPVLYKKEFCenylefntkiqkafvtesRQRGKKASLYWQLAG-IGDNYNFLRIFPETGRTHQIRIQLSHLGMPIKGDIKYGFARTEKSGG-IRLHAQSLKFEHP--------------
>UniRef50_A9SET3(56-307:327) Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SET3_PHYPA  E=3e-09 s/c=0.25 id=33% cov=91%
---------------VLFEDEWLIIVNKPRGLYS--GHVFETMPSLCSSSGETPLHLHMANRLDRDTSGIMIITKCKVAAANLTRSYMNRKVHKTYIAQCaqsqptWrksriesGHGRSRYGawhvyakhdigrrlpvktetvremitrleIVSGPDSLRWDNELSvEHDCLEVIVGSEDEVrlvsnEVTKRCSDVDEEVTLVrafPETGRTHQIRLHCQYLGLPLCGDVKYGGPlfWQSVHYDSHTLHAESLALRHPMTNQLLQVVAP---
>UniRef50_Q25257(510-728:741) ORF C n=5 Tax=Leishmania RepID=Q25257_LEIDO   E=4e-09 s/c=0.29 id=31% cov=92%
-----------PIIPVLYEDDDVLVVDKPAGLatsrhgLSCTQLGTPTTDLISVLLATDRVGALArgifrqgqVHRLDAETSGCLLIAKSDVAADSLRHQL--------GTSAAFSHHSKIYHALCVVLEPSLRNVRLHDDIIDAADPKiRTRYRVIRFFPKHrVAWVECRIQQGKKHQIRRHLASRGLPILADLEHGGAVcCQSMISRVALHAHSLSFIHPVTADPITAAAplPADF
>UniRef50_C5C8S8(90-343:348) Pseudouridine synthase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8S8_MICLC  E=4e-09 s/c=0.25 id=33% cov=92%
--------------TLLHRDEHLVVIHKPHFLSTTPgGRFVQETALVQLRNELGLDDLVPLHRLDRATAGVVMFSANPATRGAYHLLFERRAVAKTYEAVALLPDAPDDGargpgtpadpvLGRFPLTvrsrirkdkgvlrsvveeippaasgrrAGAPVRTRRSNRPHAGANAESRVELLgvgvsagTLAGRRVAHLRLTPRTGRTHQLRIHLAALGLGIAFDPFY--PDLLDLAPDdvtqpLQLLSRSLRFTDPVTGEEREFTSPA--
>UniRef50_UPI0001BC5679(88-270:291) tRNA pseudouridine synthase A n=3 Tax=Fusobacterium RepID=UPI0001BC5679  E=7e-09 s/c=0.35 id=32% cov=81%
---------------IFYQDTDILVFYKKAGELMHKG--SSHDYGLAEQFQA-YFQNEDFHfvnRLDKETSGLVLGGKCLKIVRELAEAIKKRTIIKKYYIIIEGSPEKNHFSLKTYLKKGENKVLESQTAKEEYKECSASFSVIR---KNKEYSLLEAVleTGRTHQLRVQLAGIGFPILGDIKYGKKRAK----RMYLHSHLLKI-----------------
>UniRef50_A8RLV7(4-242:274) Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8RLV7_9CLOT  E=8e-09 s/c=0.26 id=35% cov=90%
---------------ILYEDKDIIVVQKPAGLESQVSR--GFAPDMVSEIRRylhnpqdihNHPQGVStaqppyvgvIHRLDKPVEGIMVYALNQKSAASLSAALQAGKIKKSYLAVVCGKPVDKQGTyVDYLRHCKENNTSKiVDKSDENSKKAVLNYRVLEVINNpkNQEQILslidIELLTGRHHQIRVQFAGHATPLYGDERYGgglSTKSTTMTVDrgrkkssfgdahrpLALCARRLAFPHPSTGKIMEF------
>UniRef50_C4G2Q7(7-224:236) Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2Q7_ABIDE  E=8e-09 s/c=0.29 id=33% cov=86%
---------------ILYEDEDIIVCVKPVGILS-QGDKDGNKDLVrelkkhLVISARKNKQSigkepyiAVVHRLDRNVRGIMVYAKTGRAAAGLSKQIAENKLTKRYMAVVSFTPErctpeinvekkridyiAADKVKNISTIAEKESKGAER--------AELNYKVIKTAG-NKALVQVDLITGRHHQIRLQLSQIFNGIVGDTKYNDDYKLTDGWKDpALEAVELSFVHPVSGEKLSF------
>UniRef50_Q6F9V8(96-298:304) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V8_ACIAD   E=1e-08 s/c=0.31 id=34% cov=85%
---------------ILFENHDLLVVDKPHFLTISPtGKYVQETLLVRLKQQTGNEDLTPIHRLDRETAGVVLFCKRPESRGIYQTLFAKREVHKIYHAIAAYNP-----LITFPQTL--------RLCLEKGNPfytmqvnpnGQVNSETrIECLAHNQqwAKYRLSPSTGKQHQLRLHLSFLNIPIKNDPFYPVVEHKAdddfSAPLQLL-AKELSFFDPITQSPLNFKS----
>UniRef50_C3XID6(82-294:326) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XID6_9HELI  E=1e-08 s/c=0.29 id=30% cov=88%
---------------VIHENSDYLILNKPRNLVV------HHAPSVKEVTLTDYLSAKNyelstingemrfgiVHRLDKDTSGAILVAKNNASHLRFAEMLQNRTMGRIYIC-VINKALQHNTFVECYMGRNPNNRLKmaklDKEKYPFARDSKSEFRKIMESKNGVFELIgVRLFSGRTHQIRVHLSTLQRYIYGDMLY-SPEnlKSTYKTKMLLHAQLLYFD----GNVFSAKIPKD-
>UniRef50_UPI0001BC98D7(116-318:324) RNA pseudouridine synthase family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC98D7  E=2e-08 s/c=0.30 id=32% cov=88%
--------------TILYADEHLVVADKPHFLPVTPA--GEYVEQTLLRrlIHRlGNPDLVPLHRIDRHTAGLVLF----SANRQTRSAYQALFPTRQ-IDKFYEAIAPALPGLEFPRLHESrlvEGEPFFRMQEGAGASnTRTQIEVLE-RQDQLWRYGLYPVTGKKHQLRVHMAALGAGICNDPFYpdvvKNPVDDYQNPLKLL-AKGLRFIDPLNGKQRQFES----
>UniRef50_Q57Z98(599-813:828) Putative uncharacterized protein n=3 Tax=Trypanosoma RepID=Q57Z98_9TRYP  E=2e-08 s/c=0.28 id=29% cov=90%
-----------PIFPVVYEDDDLLVINKPPHVatsrhaLSCSQLCDDKATDIVSLqltckkrgdvMRRVFRQGQ-VHRLDTETSGCLIMAKSDVAASSLRHQMGTSAAYSQSSKIYLALCAVVESnLTNIPLNGVLRDPADAKI--------TTKYRIVHfYKRFRVALVEARIQQGKKHQIRRHLAAVGLPILQDVEHGGAACCSpLLQRVALHASSVTVVHPRTAEVLTCVAP---
>UniRef50_A6BI61(41-294:296) Pseudouridine synthase n=4 Tax=Clostridiales RepID=A6BI61_9FIRM   E=3e-08 s/c=0.24 id=33% cov=93%
-------------LNILYEDPHILVCVKPHGIatqsksIRYPDMVSLIKNhlakasgtsgksgapkSIGSRTpGSAEPYLAVIHRLDQPVAGILVFAKTPAAAKDLNKQLQNQGFGKYYRALVTNAPSEEEGTLEDYMVKDARTN-TSRICSakENGaKIARLHYDTVpdhgrlfstvsgssssvdvslssQSQECHETELEIHLDTGRHHQIRVQLASIGCPIVGDTKY-NPELTGNKgwQTIRLCAYKLDFKHPVTHKAMHFQLEAD-
>UniRef50_D2NPM0(137-362:377) Pseudouridylate synthase n=2 Tax=Rothia mucilaginosa RepID=D2NPM0_9MICC  E=3e-08 s/c=0.27 id=33% cov=86%
---------------VLYEDEHVLAIDKPHFLPTTPrGAYIAQTALTKLRVREQNPLLIPIHRLDRPTAGVLLFAKTVEARRPFQMMFQHRRVSKTYravapvpaDPAAAERALSAEGLQ----VRSHIQKIRDQLQVQQLSEEQCAAQGVEPNTLTTAKILqtftpsaqavegwraepnrewalydLAPHTGKTHQLRAHLNMLGSPILGDVLY--PQVLPDAPDrpeypLQLLAYSLHFEHPITG-----------
>UniRef50_C8PQZ0(8-225:276) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQZ0_9SPIO  E=3e-08 s/c=0.28 id=29% cov=88%
---------------IYFEDDYCAVVYKLNG---------ENAQTFFTPLFPHKPFIAPINRLDTPVSGIILLAFSAQAQTLLSQAFKTGSVEKEYWAICertaadtteeepgihrlehWlgFHTKTQKAFVGaAPIDITLTNTTAAGITKPKKHKKPALKKAVLYwtlcgKGDRYDFIRISPETGRTHQIRVQMAAAGHPIKGDLKYGARRSE-TGGGIRLHSYKLSFSHPVTHQDITVQAP---
>UniRef50_B1C9B9(81-277:307) Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9B9_9FIRM  E=4e-08 s/c=0.31 id=32% cov=83%
-------------LNIIYEDKNIILIDKPSGILSqADGSSKE--DIVSNLIS--YLNSKStgiVTRLDLNTSGIVLAGKNRRALMLLNEMSKNKLIDKRYLTLVRG-DFDREGKVTHYGIKD--NKENKLIL--GNKKVDGSFEVsAEFIIKKRYKyhtlLEVRLITGKTHQIRSQLDKMGFPVVGDRKYNKSKQCGNKDdfkinRQFLHCYKLTL-----------------
>UniRef50_B7G895(98-316:383) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G895_PHATR  E=6e-08 s/c=0.27 id=36% cov=84%
---------------VLFQDDQILVVHKPSG-------VAHHNDADTGRLgilnlirhqqttgRFAYPhRLYGVHRLDRVTSGILVLAKTPGAAQILTQAWREDRVTKYYVG-LSGNKATTSKQGHVRGRMIRGRRRSWLLTREThgSNVAHTRFFTAGLGhlappsstltnVSPKTLLLFRPTTGRTHQLRVAAKSVGLPLWGDPVYRDGRHRtenASTPsRTLLHAAGWHVpaddTHP--------------
>UniRef50_D1N1K3(90-311:321) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K3_9BACT  E=1e-07 s/c=0.27 id=32% cov=90%
---------------IAYEDDALLVVDKPGNLCVHPsGPFFKH--TLWHLLSSKYGKIHLVNRLDRETSGLLVAAKNPKAAAKLGKP--GWPMRKEYLALVFGNFADrieAYGFL-VPDLASVVRKKRRFVAGErppEGAVRPESARTVLLPARSGERYSLVralPETGRLHQIRATLFSLGFPLLGDKLYgpddgiflkirsnaitAADRERLILLRQALHSAKLAFRHPDTGETVAVESP---
>UniRef50_A9RVX3(64-265:361) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVX3_PHYPA  E=1e-07 s/c=0.29 id=36% cov=81%
-----------PTIERLYEDQYIIGVSKPGTLLvhnnKASSPLEKQRNAFlknMVEAQLTAGQKVSpVHRLDRPASGAIIFSKSAVATRAAQASLSHPACIKEYVVL-------ARGTTPDFFICDEP------VNDEKGAP-KSAVSQCEKILDlpesrcSLLKVVIK--TGRWHQIRKHLNHRAHHVVGDvkhgkgktnRFFRE-NHKMLSGRIFLHAARLTFPHP--------------
>UniRef50_B2RHT4(86-295:324) Probable RNA pseudouridylate synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RHT4_PORG3  E=1e-07 s/c=0.28 id=26% cov=92%
-----------PLVRIIWQDDYFVLIEKKAGVSTVASGV--NKDRTALRIVSDHlkqydPEVKifMLNRLDKDSAGMVLFAKNKEVQGFVVDKWSKVVLEQRFVMAIEGEMPDAEGTLDPPRYQTSIKGKQSRIVAETpsvHSVGTARYKVIRRGA-VCSLVEVTLLSGRNNQLRRQMGQLGIPIAGD--WRQGSSFRHLDCLALQGTRFVFRHPETGDTQEYKLP---
>UniRef50_Q04TZ1(74-376:377) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04TZ1_LEPBJ   E=2e-07 s/c=0.19 id=32% cov=97%
-------PPVRKDYKILYEDEFFVAVDKPGDLPVHPaGKYRKGNLLTLLKESGKFENLFTVHRLDRETSGVVLFAKDSKAASLLSGLFSSRKIQKYYITKVYGdfpRRKIAYGVLKpdvssiirkkrkfFLLKSNFLKRnkkyflensfsPEEEFCLTAFRKIEsyfikTQFQEIEsdvgelkvrsrkkklnFESLQTqnekneepkvrsiypkhefySFVLCKPITGRMHQIRAVLYGLDFPIWGDKLYGKDEevflefiegknpdltERLGMERQALHAYAIRFNHPITNRKMKIVAsvPKDF
>UniRef50_A9FG19(66-273:326) RluD4 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG19_SORC5  E=3e-07 s/c=0.28 id=33% cov=86%
--------PGAPPVEVLARWGELLVASKPAALPTEPER--RGTRSLVTEVAellglRDLPHAAS--RLDVGVSGAVLCATGARGRRHVVAMREAGRIARVYVG-VAGGRVEGSGTWDAPIGAARArgGRSLPAVGGADAKDASTHYRAVASAGGGAAPATllrLDPVTGRTHQLRVHAAHAGAPLLGDRDHGGARSVTTArgrviplSRVALHALRVT------------------
>UniRef50_D1VRZ3(86-293:316) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VRZ3_9FIRM  E=3e-07 s/c=0.28 id=31% cov=81%
---------------ILYEDDNICLMKKPLNMLTHNDK-NFYQDNMVDRfidyliFKEEYsPREENTfrpsicNRLDRNTSGILLGAKNAETLREINKAIKERLVDKFYLTIVKGKvQKPFE--INIKLEKTDKNIMRKS---SQGKDSLTKFfpliSNGEYSL-----LKVKLITGRTHQIRASLKEKGLYILGDRKYGTGKDKEFNSQ-ALHNYLIKFN----------------
>UniRef50_A9GNR7(136-361:368) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNR7_SORC5  E=4e-07 s/c=0.25 id=34% cov=82%
--------PSAPLDVVLERDD-LVVVNKPAGVPTAPLHPGE-RGTVANALVARYPEMAGIgfsprepglcHRLDTDTSGLVLAARTAAAFAALGAGLKEGRLDKRYLLICQIGDLPEMGSIEVPLAPHPKDKKRVYPCIHprdvaryAPRPAATMYkrvrqvglwELVEARAPRALR----------HQIRAHFASVGHPLAGDVLYGGPAVEGLS-RHALHAHYI-------------------
>UniRef50_C7LWX3(84-266:306) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWX3_DESBD  E=2e-06 s/c=0.30 id=33% cov=81%
-----------PGLRGVFENDEMLVIDKLAGLPVHGG--TGWTDSVHDRLKACFAGQAFvpipVHRLDRDTSGLLLCAKT----HDFLRAMHASWPtlTKGYLCWVEGAWAAAGWRTVVSELAKAQTGSGEQVVSGQGKRAVSHvHPVLVTAGKSLLLVVLG--TGRTHQIRVHLADCGHAIVGDPRYGQGGG------LLLHAAALS------------------
>UniRef50_Q3ABZ7(77-296:305) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q3ABZ7_CARHZ   E=6e-82 s/c=1.39 id=36% cov=96%
--------PEEIPLDIVYEDEDLVVVNKKAGMVVHPAEGNWDGTLVNALLYHcqnlsgigGVLRPGIVHRLDKDTSGLLVVAKNDLAHQSLAEQIKEKKAVREYWTIVHGYLKNKEGIIDLPIGRHPRDRQKMAVVS-NGKTAQTVYKVLEEFNKGFTLIQAKLLTGRTHQIRVHFSYLGHPVLGDPKYGHQNNPFGVKRQMLHAIKLSFIHPRSGELLEFTAplPEDF
>UniRef50_A9BFW4(80-304:319) Pseudouridine synthase n=8 Tax=Thermotogaceae RepID=A9BFW4_PETMO   E=5e-77 s/c=1.28 id=37% cov=96%
--------PENIPLNILYEDEELIVINKPAGLIVHPTPSIKTGTLVNALMHHvkdldktmqDPNRLGIVHRLDKETSGVLVVAKNAFSHHLLSKEFKERKTMKYYLAIVEGTLKEKEGEINLPLGRHPILRHKRAVVY-NGKEAITEYKTLKEFGDLATLVWIRLRTGRTHQIRVHFKYIGNPLIGDSLYGKNKIEKNLQipvgRQMLHALKLGFYHPKTKEWMEFLAPLpdDF
>UniRef50_A7HM17(74-297:314) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A7HM17_FERNB   E=5e-76 s/c=1.27 id=37% cov=96%
--------PEDIPLDIIYEDRDILVINKQPGIITHP-IPSHTSGTIVNGVLYHCKdlqgiggvlRPGIVHRLDKDTSGVMVIAKNDLAHQSLTKQFKDRLTEKLYICLVKGVPKRKEGDIEINIARNPVLRVKMTVTnSEYGKPALTHYKVVREFGDIAALVFAYPKTGRTHQIRVHMKYIGHPLMGDEVYGRAKEDEIfgIKRQMLHALSLSFYHPRTGEKVKFIAkiPQDF
>UniRef50_C8NEP8(75-295:308) Pseudouridine synthase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NEP8_9LACT  E=1e-75 s/c=1.29 id=35% cov=96%
--------PENIPLDIVFEDDSLIVVNKPSGMVVHPSKGHYSGTLVNALLYHsnslsdstseEIYRPGLVHRIDKDTSGLLVIAKNNDVHQKLAEQIAENKMNREYIAIVDGHFAHETGVVDAPLSRHQTNRLK-RVVEKGGKNAITHFEVLDSFSD-YSLVSCRLETGRTHQIRAHMEFIKHPIVNDPLYHPKGKNATEFGQFLHARTLSFTHPLTGETLNFQVepPKEF
>UniRef50_B6AN83(90-322:340) Pseudouridine synthase n=2 Tax=Leptospirillum RepID=B6AN83_9BACT   E=1e-75 s/c=1.22 id=37% cov=96%
--------PEDIHLEILYEDDDLIVISKPPGLVVHPAPGHASG-TLVNGLLFHFQsqgdeqkkgepeeeeeaerplRAGLVHRLDQDTSGVMVVGKSETVVLDLMNQFKDRSVSKKYLALVKGILPKKRGEINAPIGRSTHDRKKFAV-RQDGKPSLTRYRVLETYHENYSLLEVTLLTGRTHQIRVHFRHLGFPLLGDAVYGSKGmENRNFPRQMLHAWKLAFQHPRSAAKMEFEAplPPDF
>UniRef50_C8QZ10(80-307:324) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZ10_9DELT  E=2e-75 s/c=1.25 id=38% cov=96%
-------PPEATELvaeEVeftpLYEDEDILVLVKPPGLVVHPADGHRQGTLVHGLLHHcrnlsgisGQLRPGIVHRLDKDTSGCLVVAKNDLAHHNLVQQFKGREVEKTYQALLRGILAEDTGQVVLPIGRHPVHRKKMAVRREGGREAVTHWRVRQRFSAGYTLVELLLETGRTHQIRVHMAALGHPLAGDRLYGRNPEKDMpygIDRQWLHAWRLAFNHPRSGRRLTFTAPL--
>UniRef50_A0L9J0(82-320:332) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9J0_MAGSM  E=2e-74 s/c=1.17 id=37% cov=96%
--------PEEIALEILFEDEHLIVLNKPAGMVVHPGAGVNHGTLVNALLYHcgtpdnphgglsgigGVIRPGIVHRLDKETSGIMVAAKQDHAHIHLSRQFEQRTIGRRYLALTRGIPQPAQGRIEGAIGRHPIHRTKMAVVEQGGRAAATRYKVLEPLGQ-FALIRCRLESGRTHQIRVHMTHIGHPLVGDPLYGaqhkapshwpplHRQRFDQFQRQALHAHTLTFIHPHTGEEMSFKrpPPADF
>UniRef50_Q1MQ60(78-298:541) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ60_LAWIP  E=2e-74 s/c=1.27 id=38% cov=95%
--------PEEGFLEILFSDEHLAIINKPPGLTVHPAP-SCQESTLVHRLLKYFPklieqgglRPGIVHRIDKDTSGLLCIALTEDTRLKLSKIFLDRKINKEYLALVHGVPS-MEGYIAVPLGRDPKTKVKVAV-NPKGKPAHTEWRVLHRGKNDvYSILALTIQTGRTHQIRVHMKHIGHPLVGDKLYAGGHVNKTfqCNRQMLHAWKLSFEHPITGKKMNFLCPPpkDF
>UniRef50_A6LDZ7(336-542:549) Pseudouridine synthase n=26 Tax=Bacteroidales RepID=A6LDZ7_PARD8   E=2e-74 s/c=1.35 id=48% cov=92%
---------RETKLDILYEDDYLLVINKPEGMLSVPGKGD--ADSVYQRLSILYPEATgpiIVHRLDMATSGLLLAAKTKEAHQNLQAQFKNRTIQKRYIALLEGEVPQDEGEIRLPLCPDPLDRPRQIVSEEFGKPALTHYRVLERTSGKT-LIAFYPQTGRTHQLRVHAAHplgLHCPILGDELYGRK-----AERLYLHAEYLAFTHPITSERIEIqKSPA--
>UniRef50_Q28K21(7-217:217) Pseudouridine synthase n=11 Tax=Proteobacteria RepID=Q28K21_JANSC   E=1e-73 s/c=1.32 id=56% cov=97%
-----YAPPTDP-LDIIHEDHDLLLVNKPAGLLSVPGKGEHLSDCLIARLKIAFPEVLLVHRLDMDTSGVMVFARTPHAQRHLGLQFEKRHTKKAYVARVWGEVTDKDGHIDLPLIVDWPNRPLQHVNHETGKPAQTDWRRI-RVEDGTTRMRLFPKTGRSHQLRVHMLAIGHPILGDPFYATGPALAF-PRLMLHAESLKLRHPDGGIGMTFRARVPF
>UniRef50_B8E0R4(74-292:303) Pseudouridine synthase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0R4_DICTD  E=1e-73 s/c=1.27 id=30% cov=96%
--------PQDIPIEIVYEDEDMVIINKPKGMVVHPAHGHYNDTLVNALLYRvkdlsgigGELRPGIIHRLDKDTTGLLIIAKNDLSHQKLSEQLKNRTLRRTYWALCEGEIPWEEKRIEAPIGRHPINRKKMAIV-PYGKIAITNFKVLERF-KGYTLISADLETGRTHQIRVHISHLGFPIVGDEVYGRIDKKFGVKGQLLHAKKVSFIHPTKGIPMEFEidLPEEF
>UniRef50_Q312A0(114-347:578) Pseudouridine synthase, RluD n=6 Tax=Bacteria RepID=Q312A0_DESDG   E=2e-73 s/c=1.18 id=35% cov=96%
--------PEEGELEVLYRDAHMLVINKPAGLTVHPAPSCPEG-TLVHRLLHHFPeleaqegfRPGIVHRIDKDTSGLLLIALTEKARLALSDAFAGRRIHKEYLALVKGIPEGDSGEIDAPVGRHPTHKTRMAVVR-GGREALSTWRVLladphGGGGTGWTLVAVRIHTGRTHQIRVHMQHTGHPLWGDALYGGMPGREelqttpalaqTATRQMLHAWKISFDHPVTGAPMQFTLppPADF
>UniRef50_C0BNA6(127-360:379) Pseudouridine synthase n=7 Tax=Bacteroidetes RepID=C0BNA6_9BACT   E=2e-73 s/c=1.18 id=35% cov=96%
--------PEDIPLDVVYEDSDLMVVNKPPGMVVHPGHGNYSGTLINALLfhVKDLPlnadeRPGLVHRIDKDTSGLLVVAKTAKAMTHLAKQFFDKTSEREYVAIVWGNVEEEQGTVRGHIGRHPKNRLQMAVfpDGDQGKEAVTHYKVMERLG-YVTLVSCVLETGRTHQIRAHMKHIGHTLFNDERYGGekilkgttftkykqfvDNAFKALPRQALHAKTLGFVHPSSGELMRFNTPIP-
>UniRef50_Q1ILA4(67-321:333) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILA4_ACIBL  E=3e-73 s/c=1.08 id=38% cov=99%
----EYQPpplraiPEDIPLDVVYEDDDLAVINKPAGMMVHVGAGateeERNRGTLVNALLYRFRalsevggdmRPGIVHRLDKETSGLIVVAKNDVAHRKLAEQFSSRRVHKKYVALVHGWPKKLKGTINLPIARDMSRRTRMTTRGSGGRDALSHYEVkekIESPYGKFALVEVKIETGRTHQIRVHMASLGHPVVGDTLYGAPGELRVTKalkgmpskmasleRNFLHAAEIELQQPATGKALRFvtKVPAaleDF
>UniRef50_D2L0S2(87-316:558) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0S2_9DELT  E=6e-73 s/c=1.20 id=37% cov=96%
---------EAGSLRVLYADKELAVLDKPPGLTVHPAPGLPEG-TLVNRLLHHFPglremageRPGIVHRLDKDTSGLLMVALTEPVRLALAADFAARQVHKTYLALVHGRPDGKGGDIRLPIGRDPKYRTKMAVPHKGGRPAHSRWRPVWTAPDGTaSLLEVTIFTGRTHQIRVHMAAIGHPIIGDAVYGPHQHAAwkrrggaiarLASRQMLHAWKLSFTHPVLKEPRSFTCppPPDF
>UniRef50_A1URK8(72-319:336) Pseudouridine synthase n=2 Tax=Bartonella RepID=A1URK8_BARBK   E=6e-72 s/c=1.10 id=39% cov=98%
-----YPEGEAIPLHILFEDDHIIVVNKPAGLVVHPGHGNWTGTLVNALIYHcgdslsgigGVRRPGIVHRLDKNTSGVIVVAKNDLAHKGLSAQFSDHgrtgVLDRRYHALIWGSPNRNIGVITASLGRARYDRTKQAVIHSHniyARHAVTHFSVIEKYQTcadkipFASLLECRLETGRTHQIRVHMAHIGHPLVGDTVYGNafktksnrfdstiKEAIDLFNRQALHAASLTFEHPAKGNIMSFSAPLP-
>UniRef50_C8PVB8(138-370:380) Pseudouridine synthase n=2 Tax=Moraxellaceae RepID=C8PVB8_9GAMM   E=8e-72 s/c=1.17 id=34% cov=96%
--------PENIPLDILYEDEAVLVINKPVGLVVHPGAGNGSGTLVNALLfhypdSRTLPRAGLVHRIDKETSGLMVIAKDSQSQLHLINQLKDKSVYRLYQAIVLASAAElaRHRTIDAPIGRHPTQRTKMAVVS-SGKPAVTHLEKITAISDAVSLVSVRLETGRTHQIRVHLSNLGFPLLGDPLYGAARKNAILlktldddqkhivqqfQRQALHAYELGFIHPKTGEPIKVQArlPED-
>UniRef50_A0YGE0(10-212:221) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGE0_9GAMM  E=1e-71 s/c=1.33 id=52% cov=93%
--------PCTEDVEILFTDDDLLLVNKPAGLLSVPGRHPANKDCLITRVQRQYADARIVHRLDMDTSGIMVLALSADSHRALSQLFAERKIIKEYEANVYGTIIDDHRLIDLPLLCDWPNRPRQKVDFHHGKNAQTWVERVSQHPDGWTRVLLKPVTGRSHQLRVHLAEIGHPILGCEFYAHQRAVSMADRLQLHATKLEFCHPNSGETI--------
>UniRef50_C4XSN0(89-318:554) Ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSN0_DESMR  E=2e-71 s/c=1.17 id=37% cov=96%
---------EDGELKLLYLDGDVLVLNKPAGLTIHPASSQPDG-TLVNRLLHHFPdmramagdRPGIVHRLDKDTSGLLLVAQTESARLALAADFAERRVAKTYLALVHGRPERSDGVIELPVGRDPKHPTKMAVVAKGGREAKSSWKLAWTAPDGTaSLLEVAIATGRTHQIRVHMAAMGHPIVGDAVYGARQHSDwtrrggamarLAKRQMLHAWKLAFSHPGTGEELSFCqpPPADF
>UniRef50_A3M2Y1(110-336:350) Pseudouridine synthase n=18 Tax=Gammaproteobacteria RepID=A3M2Y1_ACIBT  E=2e-71 s/c=1.19 id=34% cov=95%
--------PENIPLDIVYEDEDILVINKPVGMVVHPGAGNTSSTLVNALLYHspksaELSRAGLVHRIDKDTSGLLVVAKNLEAQFSLSKQLGDKSVYRIYDLVTYGNIIAG-GTIDEPIKRHPVDRVKMAIL-PGGRDAVTHYNVKERFRD-FTRVQAQLETGRTHQIRVHFSYIGHGLVGDQVYMNRvripagaselliETLRGFKRQALHAAKLGLKHPRTGEEMLFEApwPEDF
>UniRef50_Q87AR7(85-308:331) Ribosomal large subunit pseudouridine synthase D n=18 Tax=Gammaproteobacteria RepID=RLUD_XYLFT  E=5e-71 s/c=1.20 id=39% cov=95%
--------PQDIPLDILYEDEHVFVINKPAGLVVHPGAGNPDGTLVNALLHRDpalaaVPRAGVVHRLDKDTSGVMVVARTLQAQTALVEQLSSRQVHRQYLAVVVSALVSG-GTVNAAIERHPRDRLRMEV-SDTGKEAVTHYRLRERFRAHTAL-ECRLDTGRTHQIRVHMAHLRHPIVGDRLYGGSLKLPKGgtdalvamlrgfKRQALHAEVLEFLHPVRALPVRIVAPVP-
>UniRef50_P74346(94-312:327) Uncharacterized RNA pseudouridine synthase slr1629 n=19 Tax=Bacteria RepID=Y1629_SYNY3  E=7e-71 s/c=1.23 id=33% cov=95%
---------QNIPLDILYEDEQLIIINKPAGLVVHPGPGHPDGTVVNALLAHcpdlagigGVQRPGIVHRLDKDTTGAMVVAKTELALHNLQVQLKEKTARRLYWGIVYGSPKEIQGTVNLPVGRHPGDRQKMGIVPveKGGREAVTHWRLLERIGNH-SWLEFQLETGRTHQIRVHSKQMGHPLVGDNLYTSPGSvNVNLPGQALHAHQLSLIHPVSGEIITAIAPMP-
>UniRef50_D1U4S9(99-328:596) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4S9_9DELT  E=2e-70 s/c=1.16 id=36% cov=95%
-------------LEVVFEDAHVAVIDKRAGLTTHPAPGEPGPTLVNHLLHRwpdvasdisgmDRQRPGIVHRLDKDTSGLMVVALTEGDRLRLAADFAGRRVRKVYLAVVLGRPAQPAGTIDAPMGRHPSQKTRMAVVARGGREAVSDYRVLWTGPRGLaSLVAVRIHTGRTHQIRVHMAHIGHPLLGDSAYGPRENvewsrrpdrlAGLAPRQMLHAFHLSFRHPATCERVTLwrRPPADF
>UniRef50_C5VRN0(78-291:302) Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRN0_CLOBO  E=2e-70 s/c=1.25 id=34% cov=94%
--------PEKMDLDIIYEDNDIIVVNKPKGIVVHPTK--RHLNGTLSNGVLYYFNdknensiVRLVNRLDMDTSGLVLIAKNAYSHMALSRDMQKDDFVKKYLAIVHGNFNEDSGVIDKPIYRVGEGTLK-RIIDERGQRSITLFKVIEQY-KNASLVELTLETGRTHQIRVHLSSIGHPIYGDSLYG-EEEPQYIDRQALHAYKLQIPHPKDGKILKLESslPED-
>UniRef50_Q8XYX8(112-341:358) Ribosomal large subunit pseudouridine synthase D n=94 Tax=Proteobacteria RepID=RLUD_RALSO  E=2e-70 s/c=1.16 id=40% cov=94%
-------------LDVVYEDDTLLVINKPAGLVVHPAAGNWSGTVLNGLLHRypqaaGLPRAGIVHRLDKETSGLMVVARTLPAQTDLVRQLQARTVKRTYLALVWGE-TPEAGTIDAPIGRDPRDRTRMAIIeTASGKPARTHFKtldVVDLGRAQVSLVQCQLETGRTHQIRVHFESEGHPLLGDPVYtrnfrrGRPQTikaplPAPFARQALHAVRLGLVHPASGQSVHWHAgvPDD-
>UniRef50_C7LWM1(77-296:526) Pseudouridine synthase, RluA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWM1_DESBD  E=2e-70 s/c=1.21 id=39% cov=96%
--------PDDGPLNVFFADEDLVVVNKTPAMTVHPAPSVA-EPTLVHRVAHHFPallsqsgeRPGIVHRLDKDTSGLIVLALSESARLSLTQAFASREVYKEYLALVAGVPD-SSGTVSLALGRHPSIKTRMAVVERGGRAAETRFELLWSAADRsASLVRVRIMTGRTHQIRVHMAALGHPLLGDAVYADKQTAARAPRQMLHAWQLRFEHPRSFESMEFCAPPpdDF
>UniRef50_D1BAB3(90-306:320) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAB3_THEAS  E=4e-70 s/c=1.23 id=37% cov=95%
-------EPQDVPFRVVYQDQDLVVVDKPAGLVVHPAPG-HWRGTLVHGLLYRYPdlmelngvkRPGIVHRLDATTSGLMVVARNGLAMEGLVRAFKDRRVGKVYLAMAAGTLR-GEGSVSLPIGRDPDNRKRMA-CVPWGREALTRYRVI-WSRGGYSLVACQIKTGRTHQIRVHMRSLGHPLVGDRIYGGPCPEGFpLGRVFLHSWRLEFDHPRTGAPMSFICPLP-
>UniRef50_D0RPR1(76-312:325) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPR1_9RICK  E=4e-70 s/c=1.12 id=33% cov=96%
--------PKKMDLNIIFEDQDIIIIDKPIGMVVHPGAGN-YEDTMVNGLLYHCKnnlsgmngedRPGIVHRIDKDTSGLLVVAKNDQAHAFIAKQFEEHSIKRSYLVFVYGILRPLHGKIETLIGRNKTNRQKMSADVIRGKDAITNYETLEVFKGNkipdISLVKCILETGRTHQIRVHMSHKGNPILGDQTYGKKikkirgidqefeEILKSLKRQALHAHTLGFIHPTTNEEVFFasELPDD-
>UniRef50_B1ZYX0(77-298:311) Pseudouridine synthase n=4 Tax=Verrucomicrobia RepID=B1ZYX0_OPITP   E=9e-70 s/c=1.19 id=41% cov=95%
----------DIPLTVLFEDKHMLAVNKAAGMVVHPGVATSEDTLVHALLAHcagslsgigGVERPGIVHRLDKETTGVIVVAKTDAAHRALADQFATRTLKKEYVALVAGVPRLLSGSIDRAIARHPVHRHRMTV-GEGGRPARTDWELVEAFGDIGALVRCRIFTGRTHQIRVHLKSLGHPILGDALYGWKPEPRLATqpaRVMLHAEHLVLTHPISGKELDLRAPLpkDF
>UniRef50_C1ZGS9(86-322:345) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGS9_PLALI  E=1e-69 s/c=1.12 id=40% cov=96%
--------PEDIPLDILYDDEYLCVINKTANMIVHPGRGN-YRGTLAGALQFHFdslsdvagqYRAGIVHRLDRDTSGVLVVAKDNTVHQHLSRQFEERSVEKEYHAIVWGEMQFDADYVETYVRVSFRNRERMMVCPpgDNARQAATFYEVQQRFR-GFTYVKLQPQTGRTHQLRVHMHHLGHPIIADRLYEGKtcvklsdilpetpeeADETLIDRQALHARRLAFNHPVTKKRMVFEAplPADF
>UniRef50_C6XNC0(93-356:369) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNC0_HIRBI  E=1e-69 s/c=1.00 id=34% cov=96%
--------PEDIPLDVLFEDEHLIILNKPAGLVVHPAPGSTSGTLVNALLHHcagqlpgigGVARPGIVHRLDKDTSGVMVAAKTEFAHTGLSSLFQAHFMERAYLAVTRGAPRPLLGKIETRIARSTTDRKKMAVVREsrlsasaewhgeseedyeqKGKHAITNYKVLEQFGridatsglPAATLTECRLETGRTHQIRVHMAHIGAPLLGDQTYGryrglkahgsgpafetATHACKEFKRQALHAAILGFEHPVTGENLRFEVepPED-
>UniRef50_C6CWL6(84-305:316) Pseudouridine synthase n=2 Tax=Paenibacillus RepID=C6CWL6_PAESJ   E=1e-69 s/c=1.19 id=35% cov=95%
--------PQDLPLSIVFEDDYLLVVNKPAGIIVHPTKG-HYTNTLANGIVHHWQvrgervRFRPVHRLDEDTSGLVVIAKNPYIHQQLSEQLQAGTIMKIYCAYVYGTPSPADGTVGAPIDRNPED-PHVRIVTPEGYPSVTHYKTAAVFGGGqASKVRLKLETGRTHQIRVHMKHIGCPLIGDGMYGlqtgkVDEWETAAGRQALHAETLGLTHPMTKEWSEWTAalPPD-
>UniRef50_Q5PAD0(74-306:327) Pseudouridine synthase n=5 Tax=Anaplasma RepID=Q5PAD0_ANAMM   E=3e-69 s/c=1.13 id=33% cov=98%
-----LSPNYDIDLKVVYEDHDVIVIDKDPYIAVHPGNGIEHhtiTNALLARFGAGLQsvgsssRPGIVHRLDKDTSGLMVAAKTENAYYRLSEELANQGFKKEYLAVAWGIPCPKRGVIHTNIRVKRSDITMMEAANSGGKPAKTEYEVEQELGEVASLIRCTLHTGRTHQIRVHMSHIGHSIVGDQKYGKnckkcmrsgvPPDVKNFRRQALHASLLGFRHPSTGKYIEFTSkPAD-
>UniRef50_C9RQF0(72-305:424) Pseudouridine synthase, RluA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQF0_FIBSS  E=6e-69 s/c=1.12 id=36% cov=95%
-------EPEDIPLNIVYEDDDIVVINKPRNLVVHPGNGV-SKGTLAAALLYHFKenlstvngplRPGIVHRLDKDTPGLMVVAKNDAAHRHLAHQLETRTLHRTYNALVWGCPRDLEGTIDAPIGRNPKNRLKMAVV-KGGKESRTHY-VAKQFFAIATLLELQLESGRTHQIRVHSRYTGHPVVGDPLYDGRDESlnrvpplmkpvaekvlEIAPAQLLQAVKIELIHPRTNKKLTFKVPME-
>UniRef50_B5YKV0(67-300:315) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV0_THEYD  E=1e-68 s/c=1.12 id=33% cov=95%
--------PQNIPIQVIYKDDYLIVLSKPAGMVVYPcaGHPDGTLMNALAYHVKKLAnvgapfRPGIVHRLDKDTSGVMVVALDDETYYKLVEAFKKREIKKEYLALVYGQLR-GSGKITTPVGRAIYDRKKMSIKSKKAKEAITEWEVIKNF-KNYTFLKVKILTGRTHQIRVHFSSIGHPVIGDKTYGRKtyieigNKKIPVSRQMLHAHKIELIHPITEKLLQFEAslPDD-
>UniRef50_A3RGY8(105-330:353) Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=A3RGY8_9BACT  E=1e-68 s/c=1.15 id=37% cov=95%
--------PEPMPLEVIFEDDAILVLNKPPKLVVHPAAGHWSGTLLNGLLAYaptliDVPRAGIVHRLDADTSGLMVVAKTLAAQTDLVRQLQSRTVTREYWALVLGVPSQ-RGVIDAAIGRDPRNPLRFKVStTEAAKPARTHYATLdstKNAGADISWLACRLETGRTHQIRVHLEHVGHPLIGDPVYrrrlpprGEPAARwKEFDRQALHACRLALDHPVSRQRLNwFHSPA--
>UniRef50_C6JBH1(78-289:299) Pseudouridine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBH1_9FIRM  E=2e-68 s/c=1.23 id=33% cov=92%
-------------LNIIYEDEDILVINKPADMPVHPSAGN-YENTLANGIAWYFAEKgedfvyRCINRLDRDTTGALILAKNPLSAAILSVQMKKRQILRTYLALVDG-LLPDSGTINAPIARMEGSVITREVNFGTGESAITHYERLA-AGKEYSLAELHLETGRTHQIRVHMKYIGHPLPGDYLYNPDYRR--INRQPLHSYQLEFTHPTTGKVMLFTAPLpiDF
>UniRef50_Q13E92(174-414:426) Pseudouridine synthase n=28 Tax=Alphaproteobacteria RepID=Q13E92_RHOPS  E=2e-68 s/c=1.08 id=35% cov=95%
---------EAIALEIVHEDDDIIVIDKPRGLVVHPAAGHETGTLVNALIAHcgeslsgigGVRRPGIVHRLDKDTTGLMVAAKNDRAHQSLSAQFADHgrtgELRRGYYAFVWGAPNRIRGTIDAPIDRHPHAREKMAV-RDGGREAITHWEVLETFTGRsggeiVSLIACQLETGRTHQIRVHLAHIGHPLLGDDVYGphfktkasqlrpdARAALTDLGRQALHAYLLVLEHPSTGEVVAWESglPAD-
>UniRef50_C0QV86(104-313:329) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QV86_BRAHW   E=6e-68 s/c=1.23 id=30% cov=93%
--------PENIDLDILYEDKYLLVINKPAGMSVHcsPSEMSGTLVNALLYKIKDFdfvgnkERAGIIHRLDKDTSGLMIIGKNANIVSSIQEQFKNRTIKKIYHAIVVGVLKDNYIEINLPIGRHHVYRKKMTV-REDGKEALTHIKVLKRFNSHT-LIEINLKTGRTHQIRVHSSYKGFPVAGDKIYSKSFSKYSG--LMLVAKKIEFMHPITKELLDFE-----
>UniRef50_B9YI75(95-316:329) Pseudouridine synthase, RluA family n=1 Tax='Nostoc azollae' 0708 RepID=B9YI75_ANAAZ  E=6e-68 s/c=1.16 id=30% cov=96%
---------EDIPLDILYEDEQLLILNKPAGLVVHPAPGHLDGTLVNALLAHcanlpgigGVQRPGIVHRLDKDTTGAIAIAKTDIAYQHLQAQLQAKTARREYLGVVYGVPKTESGIINLPISRHPQDRKKMAIVPteQGGRTAITHWQIRERLS-NYTLIHFQLETGRTHQIRVHSAKIGHPIVGDSVYGAGRSVGVnLAGHALHAWQLKLQHPISGDWIQVTAspPQTF
>UniRef50_A0Q1S9(78-291:301) Pseudouridine synthase n=32 Tax=Clostridium RepID=A0Q1S9_CLONN   E=7e-68 s/c=1.21 id=33% cov=94%
--------PEKMHLDVIYEDKDIVVINKPKGIVVHPTK--RHQNGTLSNGVLYYFKeknensiVRLVNRLDMDTSGLVLIAKNAYSHMALSRDMQKDDFVKSYLAIVHGNLKEKSGVINKPIYRVGEGTLR-RVIDERGQRSVTRFKVVESYED-ADLVELTLETGRTHQIRVHLSSIGHPIYGDSLYG-KEEHEYIDRQALHAYKLQIPHPKDGRILKLESdlPDD-
>UniRef50_A0LPH5(77-314:344) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPH5_SYNFM  E=7e-68 s/c=1.08 id=35% cov=99%
---EDSLQPRPMPLEILFEDDDVLVLNKAPGVIVHPGAGHEEGTLVHGLLAhcsrlasRGAPrRPGIVHRLDRGTSGALMVAKSERAYLELIRQFKHHEVGKEYLALVYGTMAGASGEIRTGMGRHPVDRKRMAVLEKGGREAVSQWKV-AVAWGEVSLLRVVIKTGRTHQIRVHLSHMQHPVVGDETYGGGKRKARAvksdvlrellmevDRQMLHAVGLAFRHPVSGADLSFTAplPPDF
>UniRef50_Q2GGY1(90-324:337) Pseudouridine synthase n=13 Tax=Rickettsiales RepID=Q2GGY1_EHRCR   E=2e-67 s/c=1.09 id=29% cov=96%
-------PNHYIPISVVYEDHDIIIINKAPGITVHPGAGTNN-NTLVNALVAHYGnslshvgkatRPGIIHRLDKDTSGLMVIAKNEKSYYFLSDLLLKKQIKKEYLAVVWGLPNPKSNTIKNYICVKPNNKQMMTVTHlpHKGKLAITEYQTQKSFSNIASLIKCRIHTGRTHQIRVHMSYIGNSIIGDQKYGKNNSKSVkyakqstiintLKRQALHAYKLGFTHPTSNTYIEFHSyiPND-
>UniRef50_B8DF66(72-283:289) Pseudouridine synthase n=18 Tax=Listeria RepID=B8DF66_LISMH   E=6e-67 s/c=1.20 id=36% cov=94%
-------PTYEYDLEIIYEDDFLLVVNKPVDMKTH-ANDSYETDTCANAVQYYLEKtgqdanALAVHRLDQTTSGLVLFAKNKLAIAGLSWQMENRAIHRTYLAAVDGTWGLVMQTINKPIGEDRHHGSRRQI-SPYGQPAVTHVKVLENDNEkNTSLVECQIETGRTHQIRVHLSGIGHPIIGDTLYGGS---PRANRIMLHAEKLHLNHPFKGKEMNFSAPA--
>UniRef50_B7HGW1(78-289:297) Pseudouridine synthase n=52 Tax=Bacillales RepID=B7HGW1_BACC4   E=7e-67 s/c=1.20 id=34% cov=94%
---------EDIPLCIIYEDDAVLIINKEANMSTIPSR-EHPAGSVANALLSHYDKqhlastVHIVTRLDRDTSGLMLIAKNRFVHHLLSKQHQQKAVKRTYEAIVHGKIVEREGMIDAPIGRKSDSIIERTVC-EDGQRAVTHFKVIDSTYHKT-HVALELETGRTHQIRVHMAHVGHPLLGDSLYGGR--RDEMKRQALHSKSLTFYHPILEKEMSFTikLPSD-
>UniRef50_B6BTN1(80-306:346) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=B6BTN1_9PROT  E=7e-67 s/c=1.12 id=33% cov=95%
---------ENISLDIVYEDDDILVLNKPYNLVVHPGSGNANGTLLNGLLyynkdLEKLPRGGIVHRLDKDTTGLMVVAKNEESQNNLISQLQSKSVYREYRAIVWGQIWQNK-VIQKPIGRHPRQRTKMAVTKVNGKDAETKLEILERFNYHT-YVRCLLKTGRTHQIRVHMLDNNSPIVGDKDYGLKkiiptknmemdllKSIKNFDRQALHAIALGLIHPKTNKEMkwTIDLPED-
>UniRef50_A8MF48(82-294:305) Pseudouridine synthase n=12 Tax=Clostridiaceae RepID=A8MF48_ALKOO   E=2e-66 s/c=1.19 id=36% cov=94%
---------QDVPFEAVYEDVDLILVNKEPGIVTHPTK--SHPDWTIANGAALYLkskgidcKVRFVNRLDMDTSGLLIIAKNAYAHHVLSEQMQEDRIEKKYIAFVWGVIKEDEGRIEAPIYRTTMDSIK-RVVDERGQESITEFKVLERY-KNATMVEVKLLTGRTHQIRVHMEHLGHPLIGDTLYGKEDAE-LIDRQALHAEYLRFWQPRFKRAIEVKAdlPAD-
>UniRef50_B3DV48(87-304:325) Pseudouridine synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV48_METI4  E=2e-66 s/c=1.17 id=34% cov=95%
---------EEIALEILYEDEEILIVNKQRGMVVHPS-CGHWSGTLVNSLLFHYGeslpgssllRPGIVHRLDKDTSGVMVIAKTERSLKSLLLQFSQRTVQKVYLCLCKNRFPYLRYSFEANIHRHASDRKKMAVHRLKGKTAETRFTLL-FASSQASFLKCEPVSGRTHQIRVHLSHLGFPIIGDPLYGKGVRKYPFP-LLLHAYALKIEHPRSGKKIEFMAPLpqDF
>UniRef50_B6J6C4(84-307:327) Pseudouridine synthase n=7 Tax=Coxiella burnetii RepID=B6J6C4_COXB1   E=2e-66 s/c=1.13 id=32% cov=95%
--------PQPIPLDVIYEDETLLVINKPVGLIVHPGAGVRDQTLINALLHYDpslsvVPRAGIIHRLDKDTSGLLLIARTLASHHALIKAMKARQIVREYEAIVKGVLISGR-TIEAPVGRHPIHRTRMAVV-EFGRPAITHFRIIKRYRAHT-HIRVQLETGRTHQIRVHMAHIHHPLAGDPVYGSHvgipvhlsdplqTALKTLKRQALHGATLQFSHPVDQRPMACHAPLP-
>UniRef50_Q1WS43(68-286:296) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WS43_LACS1   E=3e-66 s/c=1.16 id=35% cov=96%
---ENVKMSKEP-LDIIYEDSNWLVVDKPPLLSSVPGPSNR-TDTLVNRVKFHLWQqkskdlvPHVITRLDRDTSGLVLVAKHRFAQGLINKQVEEHSIDKKYLAVVEGIITEKHGIIDKPLGPRENGIGQM--VTDTGKIAKTEYWVREYLGDKATLVECKLHTGRTHQIRAHFSSINHALVGDELYGG-RLDWGLERQALHAYQLAYVDPFTQEEKLFKSemPKD-
>UniRef50_D1CBT6(86-298:313) Pseudouridine synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBT6_THET1  E=6e-66 s/c=1.18 id=35% cov=92%
-------------LRVVYEDDKIIVIDKPAGMVVHPSPG-HYDNTLVNALIARYPdllkqptdRPGIVHRLDKDTSGLIIVARDLDTLNYLQGQMKARKIFKEYTLLCCGALDPPEGRIEAPIGRDLRDRTKMSVIA-GGKEAVTEYSTIQSLGKYTLAIA-RPITGRTHQIRVHFAAIGHPIAGDPIYGNCRLEGL-NRQFLHASRLGVVMP-NGEYKEWHSPLP-
>UniRef50_Q14NK8(76-295:306) Probable pseudouridine synthase d protein n=1 Tax=Spiroplasma citri RepID=Q14NK8_SPICI  E=8e-66 s/c=1.15 id=30% cov=96%
--------PLAIPLTILYEDSYLMVIDKPNNLVVHPAPGHQNDTLVNALLARGVqwstasgeQRPGIVHRIDRQTTGTLIIAKNDVVHHQLQQQIQTKQLQRRYLALVHGQIIENRAKIDAPIGRDPNNRKKMVVTAKNSKKALTNIVVIERFND-YTYIECELESGRTHQIRAHLKYINHPIVGDPLYGTVADKKESFGQYLHAYQLRFIHPVTKESLTITAalPQEF
>UniRef50_B5YAZ5(7-217:226) Pseudouridine synthase n=2 Tax=Dictyoglomus RepID=B5YAZ5_DICT6   E=2e-65 s/c=1.18 id=35% cov=93%
-------------LEVIYEDNHLLVVNKPAGILVQGdiTKSTTLLEISKAYIKEKYKKPGnvflaIVHRLDKPVSGVVIFARNSKSAGRLSEAFRERKVEKEYIALCKGIFKVKKGTISESLLWVEKERKARVSQDDKSKNAITHYEVLEEF-KNLSLVRLIPETGRKHQLRAHLSYIGHPILGDEKYGGG--RIFKDRIFLHCKKMAVPHPVRKDIMEFEAKiPDF
>UniRef50_A4J479(79-286:303) Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J479_DESRM  E=4e-65 s/c=1.20 id=32% cov=93%
--------PERMELNILYEDAHLLAVNKPPGMLVHP-LTNETSGTLANGVLYHWLQQgtidrfRPVHRLDRNTSGIVLIARNPYVQQQLQIQMKQGQFVRRYLALVKGKVQPEQGVIQAPIALEEGSFIKRMI-SPAGKEAISHYQVLRTF-NQASLVRVELETGRTHQVRVHMAHMGHPLLGDSLYGGDTSN--IKRQALHCAYLAFNHPVQGSRIKISC----
>UniRef50_C7GZW0(94-303:318) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZW0_9FIRM  E=5e-65 s/c=1.19 id=34% cov=90%
----------------VYEDEHLLVIDKPAGIVVHPTHGYEENTIAHALIHYmdtvgEEFKIRFINRLDMDTTGLLMIAKNQFIQNAVVSEMKRGNVEKRYLAVVHGLPCNREGIIDAPIKAVEGEPRRQVM--EGGKPSITEYKVVGVSDElNVSFLDVRLHTGRTHQIRVHLKHIGCPILGDEFYGGKES---ADRQLLHSRYLRFTHPVSKKIVELTAnlPDD-
>UniRef50_Q8ERS8(98-311:322) Pseudouridine synthase n=2 Tax=Bacillaceae RepID=Q8ERS8_OCEIH   E=1e-64 s/c=1.16 id=33% cov=95%
--------PEKLPLDIIYEDAYCLVVNKPAGQACLPSMNHRH-NTLANGLTYYYQKnsipstVHIVTRLDVNTSGLVLVAKNQYVHSLFSRMQQEGNINRVYEAIVHGEVSPTSGIVDAPIARKEGSIIERTVDMRNGKYAKTNYRVL-YADSIASWVEIKLETGRTHQIRVHFQYLGHSLYGDNLYGG--SKDIMLRQALHCKQITMMHPIKNQPIQLEAslPED-
>UniRef50_Q5Z8P2(134-418:445) RNA pseudourine synthase 2, chloroplastic n=6 Tax=Magnoliophyta RepID=PUS2_ORYSJ  E=2e-64 s/c=0.87 id=34% cov=97%
-------EPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNAilhhckistftclarnsiddecpdssdddidvfdidqfttgevssEVREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPGSGhryaRHAASRYKVREvFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALsllrprtpsryhcdlsnmiskIDRPCLHAALLGFKHPHSGKILEFSCPPpdDF
>UniRef50_A8RHQ2(64-278:287) Pseudouridine synthase n=2 Tax=Clostridium RepID=A8RHQ2_9CLOT   E=2e-64 s/c=1.15 id=35% cov=94%
--------PVKLPLSIVYEDEDILVINKDAGVPIHPSQG--HYDNTLANAVSWYFHEkgeaftyRVINRLDRDTTGLLVLARHMLSACILSEQMTGRRIRREYRAIVLGH-TPEEGTVDSPIARAEGSTIERRVDHETGERAVTHFRTLLYNEEKdLSLVSLSLETGRTHQIRVHMRSIGHPLPGDFLY-CPDYRY-IDRQPLHSYLLRFEHPITGKEMEFTAglPED-
>UniRef50_C5WJF2(130-325:341) Pseudouridine synthase n=104 Tax=Lactobacillales RepID=C5WJF2_STRDG   E=2e-64 s/c=1.26 id=35% cov=89%
----------------LYEDDHLIIVNKPEGMKTHGN--EPTELALLNHVSAYTGRtCYVVHRLDMETSGVIVFAKTPFILPILNRLLEKREISRDYWALVHGTLSSKEVSYREPIGRHRHDRRKRVVDVKQGQKAVTDVKLLKSFKQNVSLINCRLQTGRTHQIRVHLSHHGHALLGDPLYSKGKAE--CPRLMLHAHQLRLRHPLTQEMICVQA----
>UniRef50_Q0F3G4(94-307:315) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G4_9PROT  E=9e-64 s/c=1.14 id=38% cov=94%
-------------IPVLYEDDSLLVVNKPAGMVVHGGSGHEAGLIEALKQSRGLDDLRLAHRLDRDTSGVLLMAKHLDALRRLTESFRERDMQKTYFALIAGHPYAHAGRMSSNLAKgVVRGGERMVVDSEEGKASVTDYQVMieyERHGFPYAMVALNPHSGRTHQLRVQLQHEGHPILGDGKYGEKAQLAaykslGGKGLMLHAWRLRFTHPVSGKSLECKAPWP-
>UniRef50_D2RBY1(82-308:321) Pseudouridine synthase, RluA family n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBY1_GARVA  E=1e-63 s/c=1.07 id=33% cov=96%
------NESSVCNIPIIYNDDDVVVIDKPVGVASHAakGWSGPTVPECLEAVGIDIKttlcdesRKGIVSRLDVGTSGLMLVCKTDFAYEVMKNQFAKHIVKKTYHALVQGDLAQDKATIDAPIGRAKVSDFRFTI-TSDGKPAVTHWDVLERFSQAT-LVSVNLETGRTHQIRVHFSSIGHPLVGDSMYGANPvlaQKLGLQRQWLHSMELTFTHPRTGKSVTVKShyPLD-
>UniRef50_B6TXP4(134-416:439) RNA binding protein n=3 Tax=Poaceae RepID=B6TXP4_MAIZE   E=2e-63 s/c=0.86 id=33% cov=96%
---------EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA-KGTLVNAILHHCKistftclarssagdecpdssdedtdvfhvdqfaaedvssevrnalvRPGIVHRLDKGTSGLLVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRIRMTAIAGSGhryaRNAASRYKVREvFAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDETYGGTQSMALSllrprspskyhsglsnllskvDRPCLHAASLGFKHPRSGKVLEFSCPPpdDF
>UniRef50_D2RJC8(72-280:294) Pseudouridine synthase, RluA family n=2 Tax=Veillonellaceae RepID=D2RJC8_ACIFE  E=3e-63 s/c=1.16 id=31% cov=93%
--------PVHLPLSLLYEDEDLLVVDKPAGMLIHPTWSGA-RDTLVQAVGGYFRRTGqhcGIHplyRLDRDTTGVLMVAKSAFAKHALTRD--HSQIYREYLAVCEGRWGIPQGRIEHPIGRVAEGVDRWTV-RPDGRPAVTEYRILEENQEWTVL-KIHLLTGRTHQIRVHFAHEGHPLVGDPLYGTKDGR--IARQALHAWTVRFRHPRTGEEILLTAPMP-
>UniRef50_C2D7A7(76-310:338) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7A7_9ACTN  E=3e-63 s/c=1.03 id=29% cov=97%
-------PNASIPLDIRYEDDYLLVISKQTGLVCHPSPGHvddtlsnalvAHCGYEHLGLLQGDDRPGIVHRLDMDTTGLMVAAKDNTTQQALQDLIRLRVFDRRYIVLVQGYVTPDEGTITTGIARSKKNRLKMCISKDPAsREAITTFKTLERFeagskDDGYSLLECHLYTGRTHQIRVHMRYVGHSVVGDPLYGrkGDALNQGLQRQFLHSWRMSFDHPITHEHLQFcdKLPSD-
>UniRef50_D0BL50(72-287:296) Pseudouridine synthase n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BL50_9LACT  E=4e-63 s/c=1.12 id=34% cov=94%
--------PSHIPLDILFEDDYLLIVNKPQGTASIPSQL--HPDQSMANRVKGYLQttrtqdcvTHVVTRLDRDTTGVMMFAKHRVVHAWMDQALRNKTIQKTYHAIVtKQDVLKEHDLIDAPIGR-TDDSIINRCVRPDGKPSLTEYW-LEETYQHSQLVKIRLHTGRTHQIRVHFSWLGCPLLGDDLYGGEKIEPLM-RQALHCSQLDFVHPMTGEKMCVKAllPKD-
>UniRef50_A0L8J2(101-311:328) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8J2_MAGSM  E=6e-63 s/c=1.15 id=34% cov=92%
----------------LHRDGWILVLNKPAGIPVHGGSGHQWGvvDAVRASLEKLGieAQAELCHRLDKETSGLLLFGLRPRAVRLLTEAMRENQVTKTYLTLVQGVPAARQGVINQPLSKgNVRGGERMVVVEQGGQRAVTHYRVL-RSYGVASLLEVQLETGRTHQIRVHMQWLGHPVAGDGKYGDKAFNKwmrerGLKRLFLHASELAFRHPENEQKLAYQAPLD-
>UniRef50_C4V3I7(72-281:294) Pseudouridine synthase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3I7_9FIRM  E=9e-63 s/c=1.15 id=35% cov=93%
--------PESLPLSIIYEDDDLLVLDKPAGQLVHPTTKETHG-TIANAVRGYYAacgvhlDFHPCHRLDRNTSGLLLIAKHPEVQYQIAQQ---NTLRREYLALIAGSLTPPEGCIDVPIARALPSIILRCVSTE-GKSACTHYVTVQTDG-RYSLLRLQLDTGRTHQIRVHLAHLGHPLLGDDLYGG--TRAEIARHALHSAHLTLVHPRTKKMLALSAllPAD-
>UniRef50_D1XZI5(360-570:577) Pseudouridine synthase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XZI5_9BACT  E=1e-62 s/c=1.14 id=43% cov=90%
-----------IEIPILFEDNYLAVIDKPAGLLSVPGkKLATSVYALLKQKWQGRCKPYMVHRLDMDTSGLMVVAKQAHVYHDLQQQFINRTVNKRYTAflplsLLDKNLPPK-GKIILPLTADLFDRPRQKVDKEVGKIAITTYEIVgkthygERLKQLAVRVLLYPHTGRTHQLRVHCAHsegLGTPIIGDNLYGNK-----ANRLHLYADRLRFVHPITHKEMTF------
>UniRef50_D2ELJ1(77-287:301) Pseudouridine synthase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELJ1_PEDAC  E=1e-62 s/c=1.14 id=31% cov=93%
------------PIDVIYEDQDYLVVNKPPFLPTVQSA-RNQTDTLVNRVKNYYAErdyesqvVHVVTRLDQDTSGLVLFAKRRFAHTIMDQDLRQHRVQKYYLAMATGRFAQSHGLIDAPIERDPASFIKRRVASAgNGKPSKTEYWVLEQ-TDTDSLLKVQLHTGRTHQIRVHFSELHHPLIGDPLYNETSFRSL-QRQALHCFSLKFENVFRGKKIDVQAPIP-
>UniRef50_B1MZP7(73-292:300) Pseudouridine synthase n=5 Tax=Leuconostocaceae RepID=B1MZP7_LEUCK   E=3e-62 s/c=1.09 id=31% cov=95%
--------PDYRPLDIIFENEHWLVVDKPYGVTTVPGHADR-LHTLVNQVKGHLEEinaedlvPHVVTRLDRDTSGIVLLAKHRFAHAVLDQQLQDHTVEKFYLAYPSGILTEDHGDINAPIGRVEGDFIKREV-RDDGKPSRTEYWVERRYDENgeqpMTRVKVQLHTGRTHQIRVHFKNIGHPLVGDDLYGGPLWHGL-KRQALHAYHMRFYDPFIEDYREFntKLPED-
>UniRef50_Q89AD9(81-305:317) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RLUD_BUCBP  E=4e-62 s/c=1.06 id=30% cov=95%
---------ENIFLNVIYEDDDILVINKQDNFVVHPGAGNTSGTLLNALLHRDstffnIPRAGIVHRLDKDTTGLMVIAKNNLSYMALIDQIKCKKVIREYQAIVYGKVISG-GTIVKSIIRNPIKRTTM-IVNKCGKRAITHYRILKRFTHHT-HLKIILETGRTHQIRTHMLYINFPLVGDKTYGNKfkfyknisltllEQVKKFPRQALHASRLCLYHPVTKHLMEWNStlPRD-
>UniRef50_B7GQ28(71-288:320) Pseudouridine synthase, RluA family n=21 Tax=Bifidobacteriaceae RepID=B7GQ28_BIFLI  E=5e-62 s/c=1.10 id=31% cov=95%
-------EPIATDMAVVYEDDDVIVVDKPVGVAAH-ASVGWTGPTVLGSLRDRGvhiasygaaGREGIVSRLDVGTSGLMLVCKSDLAYTEMRRQFAEHEVKKTYHALVQGGLKENKATIEAPIGRAKVSDFRFCV-TPAGKPAVTHWDVLERFGHEATLVSVNLETGRTHQIRVHFSSIGHPLCGDPMYGANPVLSEAlglDRQWLHAMKLEFRHPRTRVWTTVRS----
>UniRef50_C6D874(113-314:332) Pseudouridine synthase, RluA family n=2 Tax=Paenibacillus RepID=C6D874_PAESJ  E=5e-62 s/c=1.18 id=33% cov=90%
--------------EVLYEDDFSLVLNKPAGMPVHesHSGQTGTLDEAAARWLLEQGDPLPVrhiHRLDDDTSGPVLYSKNDLAQWVLDEAMREKRIDRRYLAVVQGKVKKSSGTVNAPIGKDRHHSSRRRV-TPGGDLAITHYETIRAFSD-ATLVRLQLETGRTHQIRVHMSHLGHPLLGDKLYGGDT--RLLQHQALHGERLLFPHPWTGELVEAAA----
>UniRef50_Q3JQ55(243-460:477) Pseudouridine synthase n=170 Tax=cellular organisms RepID=Q3JQ55_BURP1  E=7e-62 s/c=1.09 id=35% cov=94%
-------------FEILFEDDAIIVLNKPAGVAVHGGSGVAFGVIEQMRHARPHAKfLELAHRLDRETSGILMLAKKRSALVGLHEQIRENRMDKRYFACVHGDWAADWGrrrVVKAPLFKyATPDGERRVRVQEDGLPSHTVFNLVDRWPD-YALVEAELKTGRTHQIRVHLAHLGLPIVGDAKYGDfalnkalarANAVPSIKRMFLHAHRLRLAHPLTGEPLQFDAPLP-
>UniRef50_Q47417(116-338:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=7e-62 s/c=1.07 id=37% cov=94%
-------------LEIIYQDEHLVAVNKPSGWLVHRSWLDRKEKVVVMQTVRDqiGQHVYTVHRLDRPTSGVLLLALSSEVARALSQQFESHQMQKTYHAVVRGYVL-DDGVIDYALTEELDKIADKFTNPDKApQPAVTHYRSLaqaempvaigRYPTARYSLMELKPQTGRKHQLRRHMSHIHHPIIGDTAHGdlrhnrGMESHFSCGRLMLHASELQLNHPVSGQPLTLQARWD-
>UniRef50_Q28US1(99-327:354) Pseudouridine synthase n=43 Tax=Rhodobacterales RepID=Q28US1_JANSC   E=8e-62 s/c=1.04 id=36% cov=93%
---------------VIYRDDHIIAINKPAGLPTQGGTGqSRHVDGLAEALKFGLEdKPRLVHRLDKDTSGVLLMARTRMGAKALTDAFRLRSTRKIYWAAVAGSPLPRMGTIKLGLVKAPGHGRggeneKMRAVPvdeiaqvDGAKRAETDYAVMSNLGGRVCWCALVPITGRTHQLRAHMAEIGHPIIGDGKYGGSGQENLGDgwgaqlggeisrKLHLHARSLSFRHPMTGAQVNLVAPLP-
>UniRef50_C7MN62(78-306:347) Pseudouridine synthase n=8 Tax=Coriobacteriaceae RepID=C7MN62_CRYCD   E=9e-62 s/c=1.04 id=28% cov=96%
---------EPIPLDVRFEDRWMMAISKQAGLCVHPAPGHEGGTLVNALIyaygrdslahVQGDDRPGIVHRLDMDTSGLMMCAKDDTCGMALQDLVRDHKVDRRYLTLVHGNIAFDTGQIDEPIGRVGDDRLRMKISYrPTARNALTTFTVLERFeagraDNGYTLLECRLYTGRTHQIRVHMEFIGHCCVGDPLYrwGNEQVNLELSRQFLHSYSLSFNHPMTGDDIALVdgLPPD-
>UniRef50_A5ZQM9(86-322:334) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM9_9FIRM  E=1e-61 s/c=1.00 id=34% cov=94%
-------------LCILYEDEDILAVNKPAGVLTHPAGM-HYSDSLANQVAAYFQErnlsvcIRPIGRLDKETSGIVLFAKNQVAAQRLQEQRETGVLEKQYLALVDGNLPKDQDdiwhTIDFPIKKIGNHPLRMEAVkksssAENEKYiahqltdyincfqAVTHYHVL-YSTDKWSAIKLKLDTGRTHQIRVHMQAIGHPLLGDSIYNTStmnREQCTIYRAALHAWKVRLRQPFNGRKIELEVPVpeDF
>UniRef50_D2QJH0(89-295:308) Pseudouridine synthase, RluA family n=3 Tax=Bacteria RepID=D2QJH0_9SPHI  E=2e-61 s/c=1.14 id=33% cov=93%
-------------LTILYEDQFLIVINKQAGLLSMATNKERDRTAygiLSEYTKKENPknKIFIIHRLDRETSGVMMFAKSEKVQRLMQESWNATTKERTYVALVEGIPEPPQGTITSYLRESKALIVYSSQNPDTGQLSITNYTVTKT-GNGYALLELELETGRKNQIRVHMQDIGHPVAGDEKYGAES--DPIGRLGLHAEVLAFEHPITGVPMRFDAPIP-
>UniRef50_UPI0001C37137(87-311:338) ribosomal large subunit pseudouridine synthase D n=1 Tax=Chlamydia muridarum Nigg RepID=UPI0001C37137  E=2e-61 s/c=1.05 id=34% cov=95%
--------PENIPLDKVYEDNMILVINKPRNMVVHPAPGHVQGTVVHAllheigeRLKQEFPeepwRPGIVHRLDKDTSGLLITVKTRRAKAVYSELFSSKQMKKMYIAICINSPAQKH--IHTRIARHPVKRKEMTVlskDTEGGKEAITHCHVLA-SNGRLSVVALYPETGRTHQLRVHMKHLGTPILGDPVYGVPSInfRYGLDKQQLHAYSLVFTHPESAERVELvtKLPDD-
>UniRef50_C1ZB48(76-310:325) Pseudouridine synthase, RluA family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB48_PLALI  E=2e-61 s/c=1.01 id=34% cov=95%
-------PPEPTPLEILFEDDSLLVINKPAGLIAHPT--GEIPDGTLINAVQHYldkqsthpglERPGIVHRLDRDTSGAMAICKEHLSHRLLSIQFQLGRISKSYLALVEGVLTDDQLVIDLPIGRAPGCSSALMSCRADALEAQaskTSLRVVERFPQHT-LVEAKPRTGRMHQIRIHLATIGFPIVGDEFYlkGGEirplvwpeservQVSLLINRQALHAACLSFAHPLTNEWQDFQAPLP-
>UniRef50_Q2IJ40(96-327:353) Pseudouridine synthase n=7 Tax=Cystobacterineae RepID=Q2IJ40_ANADE   E=3e-61 s/c=1.02 id=33% cov=95%
---------QDLPLAVLHEDADLIVLDKAPGMVVHPARGTPHSTVVNALLHRlglpaaagpdgALPRLGLVHRLDKDTSGCLVVAKTEAALAALQAQWKGRSVEKVYLALCHGALAAA-GRLDTPYGRHPRDRLRFTGRLASSRRAITEWRVREAFGPAASLAEVTLHTGRTHQIRVHLSEAGHPLLGDAVYGGTRREARLapddparraaeavGRQALHALRLGLDHPRTGRRLVVEAPVP-
>UniRef50_A6LIG6(87-292:304) Pseudouridine synthase n=5 Tax=Bacteroidales RepID=A6LIG6_PARD8   E=3e-61 s/c=1.15 id=34% cov=91%
---------NNPLLRIVWEDDDLIVINKREGLLSV--STDRIKERTAYRILSDYLkecdprnKIFVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEAITQRTYVAVIEGRPEKDTDLIVSNLVENKH--MQVYVTQDgDGKEAITRYRLLQT-NNRYSLVELDLETGRKNQIRAQMQSIGHPIAGDSKYGAETNP--AGRLMLHARRLCFIHPVTGEEMRFE-----
>UniRef50_B0T2G2(44-263:286) Pseudouridine synthase n=6 Tax=Caulobacteraceae RepID=B0T2G2_CAUSK   E=5e-61 s/c=1.07 id=39% cov=95%
--------PEEIAFTkslVIHEDDSVFVLNKPAGLSSQGGRIQAHTldDLLWALARRDRPRPRLIHRLDRDTSGVILTARTKPAATFLGKALMGKRFRKTYWAIVTpGAPEPRGGQIDSPLRRESIGREaYMRVCeadHPDAETARSRYRTLA-ATEGAALVELSPDTGRMHQLRVHMASIGRPIAGDSRYGGALMLGGApvPRLMLHAANLVFPHPEGGER-RISAPIP-
>UniRef50_Q6AIJ2(4-211:211) Probable ribosomal large subunit pseudouridine synthase A n=1 Tax=Desulfotalea psychrophila RepID=Q6AIJ2_DESPS  E=6e-61 s/c=1.13 id=44% cov=93%
-------------LKIIYRDDHLVVVIKPGGLLSVPGRGPENSDCVSSRLQAKIPEMitqPAVHRLDMYTSGLMVYAVSKEIHRALSIQFQEQQVDKKYTALLEGCLQEVSGEIRLPFRVDLDNRPIQILDYQHGKMGITLWRKMD-EKNGITRVEFTPMTGRTHQLRVHAAHakgLGIPIIGDSFYGSGRD---GDEMMLHAHQLSFTHPIIGEKLYFKNDPDF
>UniRef50_C4PNG9(84-308:335) Ribosomal large subunit pseudouridine synthase D n=11 Tax=Chlamydiaceae RepID=C4PNG9_CHLTZ  E=6e-61 s/c=1.04 id=35% cov=95%
--------PEDIPLDKVYEDDMILVINKPRDMVVHPAPGHTQGTVVHAllheigeRLKQEFPeepwRPGIVHRLDKDTSGLLITVKTRRAKALYSELFATKQVKKLYVAICINAPSQE--LIHTRIARHPLKRKEMTVLSthaEGGKEAITHCHVLATNG-RLSVVALYPETGRTHQLRVHMKHLGTPILGDPVYGIPSInfRYGLDKQQLHAYSLVFAHPESAERVKLvtKLPDD-
>UniRef50_D0XS67(112-319:350) Pseudouridine synthase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XS67_9CAUL  E=1e-60 s/c=1.13 id=36% cov=92%
--------------MVIYEDDLVIALNKPWGLAVQGGtKTTRHVDRLLSAWGEGMERPRLVHRLDRDTSGVLLLGKGPEAAKRLAGAFARRQAKKTYWAIVMGLPKPADGQISVHLKKSGINDYEIMRPADpkdpGAEPAETAYAVISHAAQRASWMALRPFTGRTHQLRAHMKAIGHPILGDPKYGDDASTQLSGplKLQLHARRIELDHPAGG-TLVVEAP---
>UniRef50_B1H0R5(88-287:296) Pseudouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0R5_UNCTG  E=1e-60 s/c=1.18 id=36% cov=89%
-----------------------VVVNKRSGIVVHPsyGHLSGTLLNALMGYSAGKYNPYLIHRLDKDTSGVIVFAKTEKAKISISKQLQKRVVKKIYYAAVKGVIAENRGIIKAPLGRSPKNRKLVSVNPLAKKVAITEFKVIER-KDDYTLLKVRIITGRTHQIRSHMKYINHPVIGDKQYGGPGTIGLkrCERQMLHAHNITFTHPSTSKTVKFIAqlPND-
>UniRef50_C7RGL6(70-288:305) Pseudouridine synthase, RluA family n=3 Tax=Anaerococcus RepID=C7RGL6_ANAPD  E=2e-60 s/c=1.06 id=32% cov=95%
---------EDMELKIVYENDDYAIIDKDSNVIVHPAGKIITGTLVNGLLGRYGYdglshiggddRPGIVHRLDKDTTGLIAITKTNEAYKYFKKMFETRKVDKYYYAIVFGNFDKKKGTIDNFMDRDVHNRRKMAV-RNTGRRAVSHYEVISEV-EGFSLVRIKIETGRTHQIRVHMTHINHPILGDPVYGNVKHKFNLDHQLLHCGKVGFKN-MEGDYVTYEAiPhEDF
>UniRef50_C0M8E2(96-290:301) Pseudouridine synthase n=3 Tax=Streptococcus equi RepID=C0M8E2_STRE4  E=4e-60 s/c=1.19 id=33% cov=89%
----------------LYQDEHLIIVNKPEGMKTHGN--EPTELALLNHVSAYTGKtCYVVHRLDMETSGAILFAKNPFILPILNRLLEHRDIKRDYWALIEGQLEQQTVTYRDPIGRHRHDRRKRVVDSKHGQEAITHLALLQAF-DQTCLVNCRLETGRTHQIRVHLAHHKHPLIGDPLY----SRQKAERLMLHAHQLTLRHPLAQEMIRVTAPS--
>UniRef50_C3RIE2(74-289:294) Pseudouridine synthase n=4 Tax=Bacteria RepID=C3RIE2_9MOLU   E=5e-60 s/c=1.07 id=34% cov=93%
------NPNNNSSLDIIYEDRELIVINKPAGLLSMAGGNEKEK--TAYHLVGEYlksknknARVFIVHRLDKETSGVLLFAKNEIIKNKLQNNWNDIVYKRGYLAIIEGKLKKKHGTI-----KNHLDESKTQMVYiannGKGKLAITNYKVLKESRYN-SLIEVFLETGRKNQIRVHMQSLGHSIVGDKKYGA--TTNPIKRMGLHSHVFAFVHPDTKARMEFKAvvPEEF
>UniRef50_UPI00016C4782(56-266:275) RNA pseudouridylate synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4782  E=5e-60 s/c=1.10 id=34% cov=94%
-------PPSASGLEIVHEDAHLVVIDKPSGLLTV-ATESEKLDTAFVRLsdylrARNAGRPFVVHRLDRDTSGLLLFARSAEVRDQLQGNWEE--LTKTYLAVVEGRPESSEGGVENYLTEGRDLRVRASpRPGPDGKRAASRYTV-RQTRGGYSLVEVEIETGRKHQIRVHLAGLGCPVAGDKMYGA--TTDPVRRLGLHAWRLSFDHPFTLERLELEAPLP-
>UniRef50_C8PW17(141-355:365) Pseudouridine synthase n=5 Tax=Moraxellaceae RepID=C8PW17_9GAMM   E=6e-60 s/c=1.08 id=36% cov=92%
---------------IVYEDEGLIVLNKPSGMAVHGGSGESFGVIEAMREATGKKYLELVHRIDKDTSGLLMIAKKRSTLKTLQEHLREKTLQKTYLCLVVGWISSETQTIDKPLlkytlpatqeGKSGERRVKVDVKSEDSKPSQTQINVLqkfELNGQKVSLIEAKPLTGRTHQIRVHLASIGHPLLGDDKYNPnvAKGDKMVRRLCLHAYQLAI--PEY-ETITAELPVD-
>UniRef50_A9MGU8(80-264:318) Pseudouridine synthase n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MGU8_SALAR  E=7e-60 s/c=1.25 id=37% cov=83%
---------QDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHyyppiADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMTAG-GTVNEPISRHPTKRTHMSV-HPMGKPAVTHYRIMEHFRVHT-RLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGRPRPPKAHR---------------------------
>UniRef50_D1QMM7(325-522:522) Pseudouridine synthase n=1 Tax=Prevotella oris F0302 RepID=D1QMM7_9BACT  E=8e-60 s/c=1.17 id=45% cov=88%
----------------IYEDKDIVVVCKPAGMLSVPGK--SLRENVRSLVRQRHPEATgpmIVHRLDMATSGLLVVALNLKSYIDLQRQFEEHSVQKRYVALLSRpHHGARSGQISLPLRPDLYDRPRQIVDAVHGRKAVTNY---QQTGEN--RMNLYPLTGRTHQLRMHCAHadgLNNPIKGDELYGTRDE-----RLYLHAEELSFVHPGTGKRMHFECHADF
>UniRef50_C4GBK1(98-331:341) Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBK1_9FIRM  E=8e-60 s/c=0.99 id=31% cov=95%
--------PVNLPLNIIYEDEDILLIDKPAGMPSHPS-MNHQKDTLANAVLYYYQKQgipfvfRIANRLDMDTSGLVAVSKNSLAAARVKQMIDKRQIHREYLCIVEGSFSADSslakrdfvkmrydadgqmigGRIWAPISRREGSVLERRVNASDGQTALTDFEIVQEGAK-YSLLRVWLGTGRTHQIRVHMNYLGHPLPADYLY--HPVYQDISRQPLHSAKLRFPHPVSGRQMCFESrlPAD-
>UniRef50_D2RJW8(68-277:285) Pseudouridine synthase, RluA family n=2 Tax=Acidaminococcus RepID=D2RJW8_ACIFE  E=1e-59 s/c=1.10 id=34% cov=92%
-------EPEEAPLSILEETELYLAVDKPAGLVTHNAGKERTP--ALSRRVAWYFQTHhissAVHpvsRLDRETSGVVLFAKN----ACLHHMLSRNRLEKTYLALTLGHWEQPAGILDWPIGRRPGSIVERQVD-PDGQPARTRYQVLG-EKEGLSLVRFQLETGRTHQIRVHAAAAGHPLLGDTLYGTPGAPG---RHYLHAWKVAFREPFTGRPVEITAplPPDF
>UniRef50_A6FJ39(28-230:238) Pseudouridine synthase n=1 Tax=Moritella sp. PE36 RepID=A6FJ39_9GAMM  E=2e-59 s/c=1.14 id=37% cov=90%
------------HLEILYSDNDLVVINKPAGLLSV-ASANENKQHALAILRKQLSHAKnsvalwPVHRLDRDTSGVLMFATSREMRDAVNEGWS--GAEKTYLAVVEGSPKPSQGRIDQPLRMDPEKYQMIVGPHSEAKNAVTHFKTLRTVKE-LTLLEVKLETGRQHQIRVHMAWLGHSVIGDPRYGTD-----GPRMGLHALSLSITRPNTGKRLTFEAPAP-
>UniRef50_Q126H9(120-357:378) Pseudouridine synthase n=1 Tax=Polaromonas sp. JS666 RepID=Q126H9_POLSJ  E=2e-59 s/c=0.97 id=33% cov=96%
-----YAPSREFP--VLFEDDFLLAIDKPAGVAVHGGSGVSFG--VIEQLRMARPQAdflELVHRLDRETSGILLIAKRRMALKLLQEQFRERETDKVYLALVSGNWPANHRVIDKALhkyllpGGAGEGERRVKVVpndHPDGMRSVTLVKVKSAFaalpaapGTPFTLLEVTIKTGRTHQIRVHLANEGHPIAGDDKYGDFELNkslqksvaggAPLKRMFLHAWSLKFNHPKTRKTIHLETPLP-
>UniRef50_B5JHH9(81-312:324) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH9_9BACT  E=2e-59 s/c=0.99 id=36% cov=95%
-------EPKIPDAAIVYFDEHIVVVNKAAGLMTVP-HPESDETETLDRLVNDYLRirdpdaktnrasLGVVHRIDKDTSGLVVFARTFLAKRALSEQFRAHSIERRYLAIVHGELKAQS--IRTHLVRETGDGlrgsaPKGATNSEGeelGRLAITHVDVVERLA-GATLVSCRIETGRTHQIRIHLSEIGHPIVGEKVYirGFEGELIPANRAMLHAAELGFIHPGSGEAVSWqeEASKDF
>UniRef50_A8U9H8(93-304:309) Pseudouridine synthase n=2 Tax=Bacilli RepID=A8U9H8_9LACT   E=4e-59 s/c=1.08 id=31% cov=93%
-------------MTILYEDDAIIVIDKEAGLLSIAAKFAQELTAhrqLINYVKQENQnnRIYVVHRLDRDTSGVMVFAKTEKIKQDMQENWKEIVKERIYTALVEGVVREDEGTIKTWLTESKAMKVHSATYDNGGKLAITHYKKI-RNNEDFTLLEARLETGRKNQIRVHMETLGHPVAGDKKYGATSNP--LKRLGLHATTLALIHPTTGELVRFHSkvPKAF
>UniRef50_Q03PR9(75-284:294) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03PR9_LACBA  E=4e-59 s/c=1.09 id=35% cov=92%
------------PITVLFENRDWLVVDKPAGLNVVPGPANR-TDTLVNRIKGYWEAehaenlvPHILTRLDRFTSGVVWVARHRLANSLASQLQAAHQIDKRYLAVVSGRLEADHAVIDAPLASDPTGYNQM--VSPTGKPARTEYWVQQRFATATV-VAVKLHTGRTHQIRAHFASLGHPLLGDALYDGPVT--GINRQALQALSLTFKDPFTDEQRQFTSelPADW
>UniRef50_B1ZRU1(2-243:268) Pseudouridine synthase n=2 Tax=Opitutaceae RepID=B1ZRU1_OPITP   E=5e-59 s/c=0.95 id=38% cov=95%
-----------PLPPILFEDDAMIAFDKPSGLLIAPDRWDKQRENLMGLVHARFGHgVANVHRLDADTSGLLLCAKTKPALDFLSGQFQAKTVQKTYLSLVVVLPPeeamkvvkpirddagglPDAFQVDLALGQDERQPGRMRVfKGRGGKDCVTDFRVLERFG-RFALVSCHPQTGRTHQIRVHLAAAGAPILNDPFYGNPeiklllsdlkrrykgrdEEKPLIDRLALHASELTFRHPATRELLTLQAPLP-
>UniRef50_D1PYC1(92-301:306) Ribosomal large subunit pseudouridine synthase D n=8 Tax=Prevotella RepID=D1PYC1_9BACT  E=8e-59 s/c=1.09 id=33% cov=93%
------------YVKIVYEDAYIIVVEKNVGILSMPA--GHHSLNVKAVLDEYFhktkqpCQAHVVHRLDRDTSGLMIYAKDKKTEFSLQADWKGTVYDRRYVAVVSGVMEQDEGTIDSWLKDNKSYFSYSSSTDNGGKYAVTHFYTLDRSPQH-SLVEFKLDTGRKNQIRVHAADMGHPVCGDPKYGNGD--DPIGRLCLHAYVLCFYHPVTHEPMEFQAriPQNF
>UniRef50_B0TDX6(78-306:339) Pseudouridine synthase, rlua family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDX6_HELMI  E=9e-59 s/c=1.00 id=31% cov=95%
--------PVAMELKVLYEDADLLILDKPPGIEVHPPEQRARFRPTLAHGVAHYfaekgikARVRPLHRLDKDTTGICVFAKNAFAHQALDRQLRNGSLQRGYLAILRGLPAELVGVIDAPIGRDPEHHMRRMV-RDDGERAITRYRVTQViepsglemkgaaeSEGHWALAEVILETGRTHQIRVHFRHLGTPLLGDRLYGGDSPR--IDRQALHSAWVTLLQPRSGEAVKVTAelPED-
>UniRef50_B8CCD9(91-337:337) Predicted protein (Fragment) n=2 Tax=Thalassiosira pseudonana RepID=B8CCD9_THAPS  E=1e-58 s/c=0.92 id=39% cov=95%
-------------LDVVYEDEHIVVINKPSGVLTVPGKDDNPSLNkvVFERFGCESNRMDkmVVHRLGMDTSGLVVFARTNSALRELNSLFRTRKVTRKYEALVCGHLAKDSGDIDLSLMRDYealiglDSGEVGKKLLESPKESMTKFEVIskeEMNGKKVTRIALTSISGRTHQLNVHCAAIGHPIVGDTVYGFggeaapnggleesdlPEDRASealqkdiaeavaGKPMCVHAKSISFDHPVTKEALSFDCAAPF
>UniRef50_C0F0M1(80-300:306) Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0M1_9FIRM  E=1e-58 s/c=1.03 id=36% cov=92%
-------------LHILYEDEDLIFVDKPAGIVSHPSKG-HLSDSMINGVQAYFENEGreknersNIHligRLDKETSGILGIAKNSVTAERMIKQRQRGILIKEYYALVKGNP-PEEGILEIPMeeMRDARdgDKLKMKVGkSENAKTAKTFFQVVKRF-EKFSLVSLVIETGRTHQIRFHMASIGCPLLGDSFYGDGPELGIS-RTALHAQQLTFTHPFCEKVMRIESemPKD-
>UniRef50_B8CQ92(24-245:278) Pseudouridine synthase n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ92_SHEPW  E=2e-58 s/c=1.02 id=33% cov=93%
-----------PHIEILFEDDDVVAIHKPAGLLVHRSYLARRERFFAMQLTRDkvGCHVFPVHRLDRPTSGILLFAKSSEMANALCEQFAAHSIDKEYLAIVRGNMHEA-ATLDYALKEELDDVADKDVDPnKAAQDAITSYKPLlnseipyasgRYATSRYALVHLSPHTGRKHQLRRHMAHLRHPILGDTTHGDGKQNKFfrehfgINRLWLIAKKLSFNHPRTGERVAVE-----
>UniRef50_D1AL10(67-272:283) Pseudouridine synthase, RluA family n=14 Tax=Fusobacteriaceae RepID=D1AL10_SEBTE  E=5e-58 s/c=1.10 id=28% cov=91%
--------PIKIPLDIVFEDEDILVVNKQPYLVTHPTKKKvdvTLANGIVYYFQEKYGKemvPRFYNRLDMDTSGLIIIAKNSFTQAFLQN-F--GDVKKYYMALVHGIIKEEMINIEKPIARVGDDLRRK--ILDEGQYAKTVVKTIKRNEEkNITLTECELFTGRTHQIRVHLSNEGYPILGDKLYGDMDDN--VKRQMLHSYKVSFIHPRTKERKELE-----
>UniRef50_Q5WF07(67-283:301) Pseudouridine synthase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF07_BACSK  E=7e-58 s/c=1.04 id=32% cov=93%
-------PPESPSLSlqpeqllfgIPYEDEHLLVADKPGHMATIPSRdrpGGSLANGVLHYYKQQHLQAtfHAVNRLDRGTSGLLIVAKHRYAHDLLSRLQQQGGVKRCYKALVTGVLSEKAGIINAPIDR-KPGSIIEREVGPGGKSAITHYKV-EAESKTHSLVSLQLETGRTHQIRVHFAYIGHPLVGDGLYGDHGE--ALAHQALHCDRVALTHPFTDEVLYVE-----
>UniRef50_B6BTS8(78-294:306) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=B6BTS8_9PROT  E=1e-57 s/c=1.04 id=32% cov=95%
------KPSDNFKPHIIYEDEWLLVVNKPSGLAVHGGSGIDFGLIEHMRhIKPEYKFLELVHRIDKNTSGVIVIAKKRSALRSMQELFRNKKIKKNYLVAVKGNWDSKKKEVSLRLEKKQTSEGHHVNVVEDplrGKLSKSIFYLVKQMQKQ-SLLSAQIITGRTHQIRVQLAFLGFPVLGDDKYGDfalnkKLQSSGLKRMFLHAHKLSFFHPFTEEKVELTA----
>UniRef50_A7VVQ2(70-284:298) Pseudouridine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVQ2_9CLOT  E=2e-57 s/c=1.04 id=31% cov=92%
--------PEALPVSVLWEDDALLILNKPPLMPVHpcPGHDRGTVCNFVSYYQKRKGedwRFRPLNRLDKDTSGLVIGAKDSYTASALND------VGKTYFAVCQGSL-PGEGVIDTPIRLKEGHSI-QREAGEGGKPAVTHWKSLAQgaaAGKSYTLLALTLETGRTHQIRVHLSSIGHPLAGDDFYGG--SRELISRQALHCGLVELTHPFFLSRICVKAPFpnDF
>UniRef50_C5RCG6(77-289:297) Pseudouridine synthase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RCG6_WEIPA  E=4e-57 s/c=1.05 id=30% cov=96%
-----YVPDDSQSLQVLYENDELMVVNKRKGVKTHPNSPGENGTMMNfaqAYLMKQDKRAYMVHRLDGQTTGALIIAKVPYVVPILNQMLHDKTIKRTYLAWVDGHLTDSTGAITLAIGDHPTNSRLRQIDGANAKPAITHWTKIKSVYQQT-LVRLQLETGRTHQIRLHMAAIGHPLVGDDLYN--QQSAYADGLLLHSASVQLPMPFSSEIKSIGAPLP-
>UniRef50_C0R043(1-196:217) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0R043_BRAHW   E=5e-57 s/c=1.14 id=29% cov=88%
-------------MKIIYEDNYFIAIDKEAGI--------EVDDNLINIIKKEYSHidnLYLVHRIDKFTSGIVILARDEETKKYFEDAFKNKTINKVYHAIVNGKVKKENGTIDISIGIDKKNPNRRIplSIKEGGESAITHYKVLKRLNEHT-LLELKPLTGRTHQIRVHLSYIGHPIIGDKIYSKNADIYKMKGFALIAKEIHFVHPFTKKDIDI------
>UniRef50_A9GIV4(104-337:350) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIV4_SORC5  E=5e-57 s/c=0.95 id=37% cov=95%
---------PDTPIPVLHEDDALLAIDKPAGLPVHPTA-RYHKSTVIKMMEAARPgeRLFLAHRLDRETSGVLLLCRTPEADRTVKAQFEERTgVVKRYAAIAWGWPERDTFRVELPLELDDASRykVKMRVAPPGrGLASATACEVLGRRADpltgrRYALVRCTLETGRQHQIRVHLAASGLPLVGDKLYGPDEGMFargadgvltdddrralELDRHALHAALLELTHPMTGERVRIEAPL--
>UniRef50_D2R4N0(89-298:313) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4N0_9PLAN  E=7e-57 s/c=1.06 id=34% cov=93%
---------------IVYEDRHLIVVEKPAALLTVPTPKNDRGTLLervanYVKIVSRGKGAFQVHRLDRGVSGLLIFGKTTELAQMLRDQFAMHKPEREYVAIVRGKLDKPEGMIESFLATDRDLNRYSTDDESIGQHAVTHYRVIEELA-GASVVQVWLETGRRNQIRVHFAEAGHPLIGDQRYRADEAadtRWTHARIALHARLLGLSHPMTGEPLRFESPLP-
>UniRef50_C4L584(64-284:287) Pseudouridine synthase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L584_EXISA  E=8e-57 s/c=1.00 id=30% cov=94%
-------PPESPSLDmvaserpirILYEDDTLLAVDKPAGIATIPSRLHP-TDTLANAVLGYYQRiglssaIHVINRLDRDTSGVVLFAKYGFIHHRFSELQKANGLMRTYKALVEEEVTPQ--TIDAPIGR-AENSIMERVVTTEGQRAITHILACQPFGSG-SLLTIRLETGRTHQIRVHLRHIGHSLIGDSMYGGT---ARMPRHALHSASARFIHPMTGDTIQIEApiPEDF
>UniRef50_Q3A3D8(67-280:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=8e-57 s/c=1.04 id=35% cov=93%
---------------ILLRDRYLVVVNKPPGINSQptPARYKGTLYEALLRLLDDpynkgrKPSLGMVQRLDRDTSGVMIFSIHARAHKSLSDIFAARRVQKHYLALVAGCMQAPQGEFRSLLARQHRTNL-MKSVARGGKEAVTRYRVIEKFGD-AELLEVEIPTGRSHQIRVHFAEAGHPLLGDIRYGGPDRWRGvdVPRQMLHARRLELLHPISKEPLNIEAPLpqDF
>UniRef50_Q057H9(82-297:321) Pseudouridine synthase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057H9_BUCCC  E=8e-57 s/c=1.03 id=33% cov=90%
---------ENIFLNIIFEDSEILIINKPTNFVVHLG-YGNTSGTLLNALIFHYpdnlliPRAGIVHRLDRNTTGILVVAKTISTYYFLINLFKKRKIIKEYDVIVIGRIEVD-GKIEKPIKRDIYNRTKMTVGI-GGKQAITYYSVITIFKNHTYL-RIQLKTGRMHQIRVHLSSIFHPVLGDKIYSKGIKSNFSncskkmknflskfNRPALHARMLNFIHPKTNKK---------
>UniRef50_C8PZW5(2-251:266) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZW5_9GAMM  E=9e-57 s/c=0.89 id=38% cov=94%
-------------LEILYQDEHCVAVNKPAGMLVHRSWLDRHETEFVMQTLRDQlaQYVYPIHRLDRPTSGVLLFALSSESARQLCEQFENRQVQKSYLAIVRGYLtvnAQTSGLIDYPLtqildkIGDKPSlqaLQQRKVSSTDmfaealsspaeltlLQPAQTHWQCLatteqpfqaraRYPTSRFSLARLTPITGRKHQLRRHMKHVFHPIIGDTSYGDHHQNRAIrqhigvHRLMLHAHTLAFNRLTDNRRVDITAPVD-
>UniRef50_B4UM41(84-288:302) Pseudouridine synthase, RluA family n=4 Tax=Anaeromyxobacter RepID=B4UM41_ANASK  E=1e-56 s/c=1.08 id=42% cov=91%
----------------LYADADLCAVDKPAGVPAQPTLTTDRGalPELVSALLG--APVTLVHRLDRETSGVTVFARTRDAAAALAEAFRTGTPEKTYLALCARAPSPAEGRVALALGKDPA-RPGLRRVDPAGDPAATRYRTLREAPGG-ARVEARPETGRTHQIRVHLAALGAPLLGDARYGGPRrvGEVAVPRVMLHATRLELPHPATGARMVFEAepPEDF
>UniRef50_Q6Q916(74-299:311) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q6Q916_9GAMM   E=1e-56 s/c=0.98 id=31% cov=95%
--------PEEIDIDVIYENDDYLIINKQPNLIMHPGAGCSSG-TLANALLHHYPelkniaRAGIVHRLDKDTSGVILVARNDKFRNYFVDLLQKREVTKLYSAIVVGTI-IGSFKVTDPIGRDKKNRVKMSI-RSDGKESET-FVKLKESLGNYSLLDISIMTGRTHQIRVHLSSKKLPIIGDNTYNPAKNIAKGtssklidiikqfPRQALHAYQLSFKDMHTDEFKTFNCdiPDD-
>UniRef50_Q5LC96(79-295:305) Pseudouridine synthase n=29 Tax=Bacteroides RepID=Q5LC96_BACFN   E=2e-56 s/c=1.02 id=33% cov=93%
---------RHPLLKIVYEDAYIIVVEKKEGLLSVGT--ERQKERTAQHILSEYvgrsgrgNRIYVVHRLDRDTSGLMMFAKDEKTQYTLRDHWHDIVTDRRYVAVVTGEMEKDSDTVVSWLTDRTLYVSSSSYDDGGSK-SITHYRTIKR-ANGYSLVELRLETGRKNQIRVHMQDLGHPLIGDGRYGIDGGPNPLGRLALHAFKLCFYHPVTDQLMEFETP---
>UniRef50_Q73NS0(79-335:345) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Treponema denticola RepID=Q73NS0_TREDE  E=2e-56 s/c=0.86 id=34% cov=98%
----EYAHPQKLPLNIIYEDENIIVVNKERGMVTHPAGGNWDGTLVNAlnyyrlydsRIKDEFAvelnkllsgevknieklslepyRMGIVHRLDKETSGLIITARNLKTEKLLKSFFKKRAVKKYYLAVLDGVPPKNKGRIKTSVFRSSSDRKKFSVSADlsKGKKALSAYKVLK-SDGKMSLVLFRIYTGRTHQIRLHAKFMGCPVAGDKVYGKKKtglekktglAKKTGMPLMLHAYKLIIPDTVNSKK-EFKAPIpnDF
>UniRef50_UPI000196C29C(78-289:289) hypothetical protein CATMIT_02934 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C29C  E=2e-56 s/c=1.04 id=34% cov=94%
--------PDFQDIDIVYEDDLILVVNKPIGIAVYPDD-PHKTDSLSNRVSAYYmtqgydIPVRYIHRLDNDTSGLVVFCKCHLIQAYLDHALSIKEIQREYLAYVEGHIKEgKEYKIEQNLGKDRHSPSKMRV-HSKGISAVTYYQCLENKEDH-ALVRCRLETGRKHQIRVHMASIGHPILGDSLYNEGSD---YPRLALHAAYIKFEEPITHLEIDLYSPMEF
>UniRef50_C0Q9S8(12-235:260) TruC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9S8_DESAH   E=2e-56 s/c=0.98 id=35% cov=94%
-------------LEILYQDEDLVAVNKPPGLLVHRTALATHETRFALQMVRDqtQGHVFPVHRLDRPTQGVLLFARNRNMATRMSHLFQTGKIQKTYLAVVRGHVKE-RGTIVHPLKnIKHPQDNKRINHSLKIDDAVTDYACLasvelpfyvdRYPTTRYCLVALIPKTGRRHQLRRHMKHISHPIVGDTVYGKSSHNRFfathlnCTGLLLAARELCFVHPDTGIFITITAPLD-
>UniRef50_D1B058(72-289:326) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B058_SULD5  E=2e-56 s/c=1.01 id=32% cov=93%
--------------PVLYEDEDILVINKPPFLTVHGAPSVK-EPTLVDWLQHrgislstisGEERHGIVHRIDKETSGALVIAKNNEAHVKLASQLEDKSMGRYYLAIID-LPLKENVVVDLPIGRNPNHRLKMAVQRE-GRSAKSAFCKCSLSHDGkKELIAAKLFTGRTHQIRVHLSALSRHILGDSLYGFKSHNGTIPRVMLHAYILYLKHPRSQEMLYIHAPLwdDF
>UniRef50_B9JWI8(98-309:330) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JWI8_AGRVS  E=2e-56 s/c=1.04 id=37% cov=92%
----------------LHEDEKVFVLNKPAGLAVQGGSgLNRHIDQMLeAWTSKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWALVKGVPRKHDDKISTWVVKEQTEDGDRMRIARHGEdgadHAVSYYRVLETAAQSLAWLEMEPYTGRTHQLRLHALHIGHPIIGDPKYYIDDPNwdfpgGVQKRLHLHARHIDIPHPDGG-RLRITAPLP-
>UniRef50_C1ZMP6(6-218:246) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMP6_PLALI  E=3e-56 s/c=1.03 id=37% cov=92%
---------------ILFEDNHCLVVEKPAGVLTMGDETGDENmvqlamDDLKIRHQKpGNVYVGLVHRLDRPVSGVLLLAKTSKAASRLSAQFREREPEKVYLAIVEGQLNPAAGEIVDWLIKDQERNHTRVTSpqTPGAKQAKLRYRQLEtlvTPEGIRTLVEVQPMTGRSHQIRVQLAHAGASILGDLRYGSKT--PLGKMIALHARSLTFEHPVQKQPLTIYAPLP-
>UniRef50_Q1D114(77-296:306) Pseudouridine synthase, RluA family n=6 Tax=Cystobacterineae RepID=Q1D114_MYXXD  E=5e-56 s/c=1.00 id=34% cov=95%
-----------PVLPVLHDDSALVIVNKPPGIVVEPEGRAASVVGLLAAQRppfdvEGLAQPGVVHRLDRETSGCLAFARTDTAAAALLRSFQEKRVDKRYWTLVLGQP-PAQGRLEGPYARDPADPRRFTTRVPSARRAALSFEVRERFAD-AALLEVDLDTGRTHQVRVQLSEAGFPVLADSLYGPPEarahaAARALGRQALHAFTLELPSPATGQPVRVEAplPEDF
>UniRef50_Q057L6(93-302:317) Pseudouridine synthase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057L6_BUCCC  E=9e-56 s/c=1.04 id=35% cov=93%
---------------ILFEDNDLIIFNKPYGFAVHGGSGISYGVIEIFRkIRSDLKFLELVHRIDKETSGILILSKKRSILKKMHINLREKKIYKEYLAILHGYWSKKNKIVKLPLLKKKNIKQKKKVCvHKEGKLAQTNFEIKKYLNNKT-LVKIIPITGRTHQIRVHTAQFGHPIVFDNRYGKIEKKKKKiikknSRLLLHAFKVSFLHPRNNENFSITAPLD-
>UniRef50_A4BJ00(4-231:249) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ00_9GAMM  E=1e-55 s/c=0.96 id=33% cov=94%
-------------LNIVYEDDVLLVVDKPSGLLMHPSWLDRRETDTLAGRAKAYlaqqsegAKVHTVHRLDRPTSGLVVMCKDDHAAKALVEQFQEKTVNKRYWAICRGFAPVAE-TLDYPLIEEHDRIAdKFADSDKPAQEAITEFRRLgitelaipvsRYPKMRLSWMECVPVTGRKHQIRRHLKHLRYPILGDTRHGCRHLNRAVEGsfgelfMGLRAVEMSFQHPVTNELMTFNVGAD-
>UniRef50_B8BQ07(16-244:246) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ07_THAPS  E=1e-55 s/c=0.95 id=39% cov=95%
--------PPHLTIRVLYSDDDIVVIDKPANLRSVPGHASNSPD--ADDGSKSKYQLHVVHRLDCQTSGIMVVARNSTAASKLCHAWRERDiVQKTYLAYCQRWPPyhdeqLSEGTIDLPLAASRTERIKWEVRalEDGGKPLKSELTV-ERDNDNGVVLELKPITGRTHQLRIHCATIGSGIVGDSLYGDSPVEWFGDKpqhgqqtisqsdtqtLRLHAHKLVFPHPSTGSEVTFVSPK--
>UniRef50_D2QPA6(10-230:244) Pseudouridine synthase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPA6_9SPHI  E=1e-55 s/c=0.99 id=35% cov=92%
------------PLSILYQDTELVAINKPHGLLVHRSMIASDASEFAVQLLRDQlgQRVYPVHRLDRKTAGVLLFALSESMNAIMQQQFMEGAVQKTYLAIVRGY-TPDELTIDYPLCKDDGNGAVGVL-----QEAVTHLKTLrqteipvafgKHPTSRYSLVELTPTTGRMHQLRRHMAHILHPIIGDRPHGCNKQNKLFKEhfemntMLLHAQRIEFTHPVTQETTTIAAPfqAEF
>UniRef50_D1R6W7(84-285:295) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6W7_9CHLA  E=2e-55 s/c=1.07 id=34% cov=90%
---------------IIYEDADLLVYDKPAGI-------NCDTSGIVRLIHQKDPSLKLVHRLDRDTTGILLFAKTDAVLHKMIRLFKTFKVKKTYYVIVDGAISKEKGVIDnnlAPLHKYQGQTVWGQATGSKGVHARTGWRK-EKKGQDCTLIQCYPVTGITHQIRVHMSEMGHPILGDYQYGRRFICSYQPsRYLLHAYEITFPHPSSEKEIRLKAplPSDF
>UniRef50_B0TWR8(90-299:309) Pseudouridine synthase n=19 Tax=Francisella RepID=B0TWR8_FRAP2   E=2e-55 s/c=1.03 id=33% cov=92%
---------------ILYETDDYIVVDKPSGMAVHGGSGVNSG--LVERLRQLRPKVRrldLVHRLDKETSGCVLLAKKHSSLVYFFDIFKERKVNKIYYALVHGHWDEKVDAIDLPLSRTETKDGQRivKVDKREGKRALTRILAVQKIGD-YSLLEIKLETGRTHQIRVHTRAMGHPIVADKKYGymvddKKLLAKGVDKLLLHAGKLEFYDEKQQKLISIEAKLD-
>UniRef50_A9NFY2(72-277:277) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY2_ACHLI  E=3e-55 s/c=1.05 id=31% cov=93%
---------EDVELDIIYEDDDIVIVNKPFNVIVHdDGASEDHLTrrvNMHFQYHGYHHQVLPAHRIDKETTGIVVFAKHFIALAYLSNLFESRQVVKNYICVVENKVKDKTGSIESKLIKD--SKLQKMVVSPHGKLAITHYELLGYEATR-SRLKVQIETGRTHQIRAHMASINHPVVGDILYG-----VSSSRLLLHFSEISFPMIRTKKVEHFVSNPPF
>UniRef50_C6V544(94-298:305) Pseudouridine synthase n=2 Tax=Neorickettsia RepID=C6V544_NEORI   E=4e-55 s/c=1.05 id=33% cov=91%
----------------LYEDENVLAIDKPFGFPVQSGYGI--TTSIDNAMKSINPEYRVVHRLDKHTTGVLIFAKTLDAARELWRLFSNRLVKKRYLAIVIGELKEKKGAVDCYINKVLFKGEEVMQCNHigNGEHAITQFHVIKKF-KNASLIELFPLTGRKHQIRSQMASIGHPVLNDGKYGRREAfleCSVNKKLCLHACEIEFE--LFGKIIKVTAelPVHF
>UniRef50_B1VEM5(96-305:313) Pseudouridine synthase n=3 Tax=Corynebacterium RepID=B1VEM5_CORU7   E=4e-55 s/c=1.03 id=33% cov=91%
---------------IVFEDDDLLIVNKPANIAVHVGSGVKAGVIEALRVLRpEDKELELAHRLDKETSGLLIVAKNSKMLRHLQSLLREGgeDIQRYYLA-VAGGVLKKSGkqarRIDAPL---RKTGAATVVDRRAGQQAETKLWVKKPWGRAGTLVEVQLLTGRKHQIRVHLQHLGHPIIGDSRYGDKAANQAAaekgvRMLMLHASRLVIPLP-SGEELDVQAPMP-
>UniRef50_B9KFV3(66-292:320) Pseudouridine synthase n=2 Tax=Campylobacter RepID=B9KFV3_CAMLR   E=6e-55 s/c=0.95 id=29% cov=98%
-AKESYTP--EFDIEILYEDDDVLVLNKAPNIVVHGASSVKEATLVDWLLHKGYtlsnlngeHRAGLVHRLDKGTSGAIIIAKNNQAHQFLANQLLDKSMGRFYLALSELPLKNDKMSNEKAIMRCPNNRLKKITTNTKnplAKNAKTDFINL-LSAKNCSLIAAKLYTGRTHQIRTHLADFNRYILGDELYGYK-GKIKYNRVMLHAYLIYFIHPRTKELMFIKAPMfdDF
>UniRef50_A8HZL1(76-293:319) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=A8HZL1_AZOC5  E=6e-55 s/c=0.99 id=33% cov=96%
-------EPPVSPLaaRLLHRDGMVLVLDKPAGLPVHPGpKGGETLHDHLNGLRFGLPRApELAHRLDKDTSGCLVLGRHGKALALLNRLFAEGQADKTYVAVTRGAPAEETGRIDQPLAKRSPHRGWWMQAVPKGTPggleAVTDWRVLAR-TEGLAVMALSPVTGRTHQLRAHLSHIGFPILGDSIYGGASRLPGGPMLHLHSRRIVLPVAKNGPAIDARAPLP-
>UniRef50_Q8D220(86-300:314) Pseudouridine synthase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D220_WIGBR  E=8e-55 s/c=1.00 id=32% cov=91%
----------------IYEDDDILVINKYKDVIVHPG-CDKHENTLLHDILFNYPdsknlyRAGIVHRLDKDTTGLMLIARNSFSQKKLIKLLKLRLINREYRAVLLGKIICD-GTVSAPIIRNSKNRTRMKV-HISGKESITHYKIIKNFND-FSYVKINLESGRTHQIRLHMSYINHPVLGDFVYGNKKNKYIktlyksifnISRHALHARKIKFIHPINNCLMVhkIDLPDD-
>UniRef50_Q03TY5(75-291:295) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03TY5_LACBA  E=9e-55 s/c=0.99 id=31% cov=96%
----NVDPDSAATVAVLYESADLLVINKTRGSKTHPNQPGERGTTlnhVAAYLGPDQPGPYILSRLDQETTGALLMTKTPAVVPIMVRHIADKQVQRTYLAWVHGRLT-GDGVFTDPIGRDPLDKRKRQVNGDHAQPAVTHYHVCEY-REQATLIQLRLETGRTHQLRVHLAAAGHPLIGDPLYGTATD---TNRLRLHCWQLTFPQPFTvndaHTTVTAPVPADF
>UniRef50_B9XBT8(23-250:260) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XBT8_9BACT  E=1e-54 s/c=0.94 id=30% cov=94%
----------EKLFDVVHEDAELLVINKPAGLVCHPTKGDEYS-SLISRVRLHLGpesHPHLVNRLDRETSGIVIVAKDDTTARGLRRIWEGREVQKEYLAIVHGHVREEQGTIQAALGKDTSSIIaIKDTVVEGGAASQTDFTVKKRFSreeGDFTLLRVLPHTGRKHQIRIHLAHIDHPIVGDKMYGGDEDlymalvqdrlteeqwkKLILPHHALHARAVRYE--WRGLKIEFCSAAE-
>UniRef50_D0MHX3(3-215:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=1e-54 s/c=1.01 id=37% cov=93%
---------EVAELPVLYLDNHLLVINKPSGLRSQGDRSGAPTVLSLgkALIKERFNKPgnvylGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERTVEKVYLALVEGEL-EGSGTWEDFIA---PARDHMRLVPEDhpfGKRAVLHWQAL-MTRNGLTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRAR--RWLAPGQMaLHAWKLALTHPTRRERMQWTAPVP-
>UniRef50_C9LG01(6-218:245) Ribosomal large subunit pseudouridine synthase family protein n=4 Tax=Bacteroidetes RepID=C9LG01_9BACT  E=1e-54 s/c=1.01 id=32% cov=93%
------------FMEILYEDNHIIIVNKQAGEIIQGDKTGDRTvaDEIKAYLKEKYNKPGAVflgipHRLDRPVSGVSIFARTSKALARLNEMFRKGEIEKTYQAIVIHEPQIASGTLVHWLTRNEKQNKayAHKAPQKNAKKAILDYKV-EAKSDRYWLINVQLQTGRHHQIRCQLAAIGCPIKGDLKYGAPRSNADGS-ICLHARSIRFEHPVSHKIIFAEAP---
>UniRef50_Q15QZ8(1-224:252) Pseudouridine synthase n=5 Tax=Bacteria RepID=Q15QZ8_PSEA6   E=4e-54 s/c=0.95 id=35% cov=93%
-------------LTILYQDECLVAIHKPAGLLVHRSMIDRHETQFAMQMLRDQigQHVFPVHRLDRPTSGVLVFALSADIARLLGEQFAGNTIAKTYFAIVRGHVKEA-GLIDYALKEKLDKIAdKRAKQDKDAQEAQTEYVPLqqfelpfavsRYPSARYTLVRLHPKTGRKHQLRRHMCHINHPIVGDTTHGDGKHNKFMrdqfsfNGLALTCQQMCMTHPVSNEKLAIV--NDF
>UniRef50_B6G997(7-218:227) Pseudouridine synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G997_9ACTN  E=4e-54 s/c=1.00 id=34% cov=91%
-------------LRVLYRDPWLMAVDKPAGIIVHGDGTGapTLTDAVRAHLVasgeaSASAAAQALQRLDRDTTGIVLFSLDKEAQPAFDRMIAERSIQKRYLAIVHGRF-PAAKTMCQPLGRDRHDSRRMRVSR-TGKPAHTDAKRIAYAKADAraperSLLAIDLHTGRKHQIRVHLAHAKFPLLGDSLYGGPSC---SGGLMLHASELSFTHPITGAPTHIQAP---
>UniRef50_B5JL25(8-233:249) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JL25_9BACT  E=5e-54 s/c=0.94 id=33% cov=95%
-------PTPQPPLEILYRDERLVAIHKPSGLLVHRSPIDRRETRFAIQLLRDqiGQHVYPAHRIDRPTSGILLFGLDEAAGTALSLLFQNREIQKNYLAVTRGHL-PESGLIDSPL--HKYEDADGHIKSSETQEAETAYRRLattelpypteRYDTTRYSLVELTPHTGRRHQIRRHLAHIRHPIIGDVRHGCNKANKLArshfaiHRLLLAATHVVFVHPFTNAPLKIHCPPE-
>UniRef50_C9RKF9(143-359:386) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKF9_FIBSS  E=5e-54 s/c=0.98 id=33% cov=93%
-------------LDLVVQTEDYVIVNKPSGLASQPGSGTRPGESLVEYLwewgrnEGLDFKPTIAHRLDQETSGLIIAALHGDTLRDFTRMIREHVVDKFYFALVKGNLKKDRGTISESLLRtDSAKGSKMLVgqDDENAQKAITHYRVKQHY-EGYDLVKIKLETGRMHQIRAHFASIGHPLLGDTRYGDfalnreVKKLFGLNRLFLHSCRLEFD--WQGEHKVFDCPLP-
>UniRef50_A6G930(98-339:356) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G930_9DELT  E=6e-54 s/c=0.88 id=38% cov=96%
--------PEEPAviLDygVVHEDPDVLVLDKPGNLPVHPtARYHRHTLTALMRRRLGPKHGwEMAHRIDRETSGVIIFGRRKASGPKIKGSFFRREVHKEYLAIVLGRLELPEGprLIDMPLGSAVGSKIMIKMgprpVDEGGLPAQTTIEVLahgEHRGQPITLVRCLPRTGRTHQIRVHLAEIGHPILGDKLYAAEedeflavvedgepvaelEARLGLWRQALHARALSLPHPTTGDGVRYVAPWP-
>UniRef50_D1VZE9(81-287:315) Pseudouridine synthase, RluA family n=2 Tax=Prevotella RepID=D1VZE9_9BACT  E=7e-54 s/c=1.02 id=29% cov=93%
------------YVKIVYEDRYLVVIEKQAGILSMaAGHASLNVKKVLDSYFKQSKQkctAHVVHRLDRDTSGLMIYAKDIQTAQLLEHDWHHNVYDRRYVAVVSGEMEQDEGTIANWLKDNRAYITYSSPEDNGGKFAVTHFHTLNRTTEH-SLVEYRLETGRKNQIRVHSADMGHPVCGDHKYGNGDNP--IGRLCLHAYVLCFYHPVTHRPMEFETPIP-
>UniRef50_D1BN73(77-317:324) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BN73_VEIPT   E=8e-54 s/c=0.88 id=30% cov=91%
-------------LDIIYEDEYILVINKAAGILMHPTSTIRDH-TLANGVLHYYQETnqhydfHPVHRLDKDTSGIVIIAKTSVVQHAFDK--KHTHFYKSYDAIVEGHLPSVPISINWPIGR-KPGSIIERCCTVQGKPARTDITIISkntskissgkinsddvitlnnnsnicstdsslTSYSQFTHVKCLLHTGRTHQIRVHLSQLGYPLAGDDLYGG--HLESIQRQALHAARVSFYHPITNEWLELHAemPED-
>UniRef50_B2IK20(89-325:350) Pseudouridine synthase n=2 Tax=Beijerinckiaceae RepID=B2IK20_BEII9   E=1e-53 s/c=0.89 id=39% cov=93%
--------------MILFEDRDLMVLNKPFGLAVQGGSGmTHHIDKMLASLpNERGDRPVLVHRLDRDTSGVLLVAKTRRMAAELGEIFRSRQARKIYWAVVEGVPKPAQGRISLYLakgegmedkrgphGRDAEARaglEKMRVAkhgEEDARHSVTYYAIVDKVPSRLAWLSMKPITGRTHQLRAHAEAIGHPIIGDPKYGlkpkDDPRRNDPNRaipegverkLHLLARRLILPHPRGG-ILDVTAPLP-
>UniRef50_C6VWD2(24-243:255) Pseudouridine synthase n=2 Tax=Flexibacteraceae RepID=C6VWD2_DYAFD   E=1e-53 s/c=0.96 id=34% cov=92%
---------------IIFEDEDFLVVNKPPHLATLDERTADRGGSVLRLAKEYNPELQAAHRLDKETSGALAFAKNPAAYRHLAMQFEHREVTKRYHAVVNGIHDLEGISVYLPILP-LKNGTAVKIDRADGKEAETIFNTLQVYR-GYTLVECIPITGRMHQIRIHLSCLKAPIVNDPQYGGEpiflsnlkrkfnlkkdtEEQPLIQRVALHARSLSFAL-MNGEDIRVEApyPKDF
>UniRef50_B1C3D3(87-299:310) Pseudouridine synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3D3_9FIRM  E=1e-53 s/c=0.99 id=27% cov=94%
--------PQEYPLSIAYENDFILIVNKPINTTIYP-ETKKELNTLCNYVANYYLEtnqyllIRHIHRLDKDTTGLVLFCKCPLLQPILDNMMANKLIKRSYIAICKGIIDHDL-TINRDIARDRHVNKMR--ITNKGLKAITEIKIIKHDKqKNYTVCKCDLKTGRKHQIRVHLASINHPLLSDPLYGNKS--KLIDRLALHAYKLEFIHPVTKQQIIVKAdlPQD-
>UniRef50_C5NUK8(77-284:293) Pseudouridine synthase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NUK8_9BACL  E=2e-53 s/c=1.01 id=33% cov=89%
-------------INIIYEDAYFLIVNKEINLPSIPSRNLE--DESLLEIVNYYFKkknintiPHIVTRLDKNTSGLVLIAKHRHVHA----LFSNMEIDKFYTALVSGKVKDNE-IIEAPI-RRVTSSIIEREVGEGGEFAKTEYWLDDYIVDKdISVVKLKLYTGRTHQIRVHMKYKDYPLLGDELYGGDVSN--ISRQALHCTNLKFIHPITDEVVNVRAdlPED-
>UniRef50_B2G9U4(82-292:309) Pseudouridine synthase n=14 Tax=Lactobacillus RepID=B2G9U4_LACRJ   E=2e-53 s/c=1.00 id=31% cov=95%
----DYIPSSQSHLEVLYENRDLLVVNKPRGQKTHPnyhGETGTLMNDVAGYLAHSQNNAYMVHRIDLQTSGAVIVAKNPIVVPILNRLISDGQIHRQYLAVVEGEMAQ-SGKLDWAIGRNPVNPHLHQVNGQNAQPALTYYETLASNHER-SLVKLRLATGRTHQLRVHLAHSGHPIVGDPLYNPSSTEG----MLLHGVSQKLILPFVMKSLNISAPLP-
>UniRef50_B3WCK2(72-284:300) Pseudouridine synthase n=8 Tax=Lactobacillus RepID=B3WCK2_LACCB   E=2e-53 s/c=0.99 id=32% cov=95%
--------PYSHDLAISYEDDDYLIVNKPAGVASIPAVGRQNNsmaNMVKAYLIKTKAESQAVHvvtRLDRDTSGLMVFAKHGLAHSLLDQQLHSQDFVKQYVAIVTAQtPLATHGWIVLPIGVS-DGFYMRRVVTDTGKASVTEYRTLDQNKAGAMML-VTLHTGRTHQIRVHFAAIGHALYGDGLY-SPDTHGF-NRQALHCAHLRFWQPLKHKLIDLHAPLP-
>UniRef50_A6GN92(91-309:388) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GN92_9BURK  E=2e-53 s/c=0.96 id=34% cov=90%
--------PEDMNLDIVARTNEYTVVNKQAGLVVHPAPGHWTGTLMNGLYHLDpelihVPRAGIVHRLDADTTGLMVVARTQETQVKLVQMLQARIVKRVYLAMVWGRISSPL-TVNNPLGRDPRNRLRMAVV-DHGKPAVTHFTPVAFGELlevPVTLMVCRLETGRTHQIRVHAQHAGFALVADPVYKIKGAGSHSalrlssielpngekfERQALHATHLSFPDPA-------------
>UniRef50_Q49WD7(67-270:284) Pseudouridine synthase n=5 Tax=Staphylococcaceae RepID=Q49WD7_STAS1   E=2e-53 s/c=1.03 id=30% cov=91%
----NLKPYQQP-LNILFEDDYLIVVSKPPYQNCAPSRDHLHysiVEQVLGYLNEKQPgiNPHIVTRLDRNTSGIVILAKHGFIHHLMSNL----NIDKKYLCICYGK-TEKEGVIDAPIARHPESIIQRRVDAA-GKTAQTRFKRVEY-KEGFSMCEVTLLTGRTHQIRVHFQHIGHSIVGDALYGGKHESYHH--QLLRCTQVAFIHPIKNQNIVI------
>UniRef50_C8QW29(82-316:334) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QW29_9DELT  E=7e-53 s/c=0.89 id=32% cov=96%
-------PPVASHFSVVYEDDDLLVVNKPAPLPCHPgGRYFRHTLWRLLQERCGVPKPLLVNRLDRETSGLVVVAKKRAAARDCARQWQEQQVEKRYLVLVEGEFPLGAQAVAGFLAPDPASLVRKKSRFfpaDQAAPAgavscATAFRLLALQG-GISLLEARPLTGRCHQIRATLCSLGFPVVGDKIYGLDEElflRFLADRlssddrrrlrlprQALHSAGLKMRHPADHRPLEFTCPLP-
>UniRef50_A9GP63(19-255:666) Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5  E=9e-53 s/c=0.88 id=42% cov=91%
---------------ILAEDGDLIVVDKPAGLSTH-APEAERIDDMVTRLRaflRGRGDAEaylGIHqRLDRDTSGVLLFTRRREANAAVARQFEGRTVQKTYVAAVSGFGDrPPRGTLRHRLvpapggamralaesGGAREDRAAKREDRAAGREdraakredraasgvlAITRYRLLERRGDR-ALLELRPETGRTHQLRVQLAAIGLPIAGDPLYGGPE----APRLLLHAAELRLDHPATGAAATFRSrlPAVF
>UniRef50_Q01UA0(72-294:304) Pseudouridine synthase n=8 Tax=Bacteria RepID=Q01UA0_SOLUE   E=2e-52 s/c=0.93 id=30% cov=97%
-----WIEPDVPkHFEVLFEDPHLLAVNKPSGLPTLPG-GGFLENTLLRLVQKHTPNANPVHRLGRATSGIVLFARTPQAASNLFANWNTPKIRKIYRALAQNIAQHDAYEILTPIGLVPHPRIGSVwAANPSGKPSKSLAKVISRSTSTTT-FEVSLNSGRPHQIRIHLASIGHPLVGDPLYGlTGQPLENLPGLpgdggyFLHAQFLQFQHPITGEQINLEAalPSGF
>UniRef50_A7HL94(81-302:317) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A7HL94_FERNB   E=2e-52 s/c=0.93 id=29% cov=88%
--------PVKMDLDIIYEDELIIAINKPAGVSVHPGKNVNKPsiiEGLIHYGKENGFEPFLVHRLDKETSGVLIVAKDRSVARELSEIISSRNVEKIYNALVFGKVQKV--TINTPI---------------DGQDAVSHIIPIEYFRVKlngisveLSFLEVEIETGRKHQIRKHLSSINCPIVGDKDYGNFRlnrefsKNFGLKRHFLHCKQMKFV--FNGRNYNILAqlPKD-
>UniRef50_A8SAJ4(75-270:303) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAJ4_9FIRM  E=2e-52 s/c=1.06 id=30% cov=88%
-------PQPEIPVKVVYEDAFAVVLEKPPQLAVHptlnyPGGTLANGYAAWAAAHGHSPVFRPVNRIDKDTSGLVLAAKNAYAAPLLA-----GGVTKLYYAIAQGALPLGEGAIDAPIGRRGDSIIGRCVTPE-GKPSRTEYTIIKEE-NGLSLAACVPVTGRTHQIRVHFASIGHPLAGDDLYGGSRER--IARQALHCARQSFAVPVY------------
>UniRef50_C6XFC8(102-312:346) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Rhizobiaceae RepID=C6XFC8_LIBAP  E=6e-52 s/c=0.98 id=34% cov=91%
----------------LYEDSKIYVFNKPAGISVQGGSGiAYHIDGFLkSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIanwllkKSHIGGDYVHVVKQ--NEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYcanfKGNFTSPIQNKLYLHARYMDLPHPEGG-RLQITAPLP-
>UniRef50_B6W8A0(62-273:282) Pseudouridine synthase n=2 Tax=Anaerococcus RepID=B6W8A0_9FIRM   E=8e-52 s/c=0.97 id=29% cov=95%
---ENLNyEPINKKIKILYEDKDIVAVDKPPNL-TVNSKNQESLSNYLAYYFKENKiksQIRLINRLDMNTSGIMLVAKNPFSHAYYQNQIENNELDKEYLALVEGNLIIDDF-CEIDIDYDKENK-KMKVVSDK-NHVKTYFKTLKNYGK-FSLIYCKIYTGKTHQIRLSLAYLNHPILGDNLYGSK---YDIERFLLHAYRIKFKSFRDQKKITILSKPDF
>UniRef50_UPI00016C585E(82-309:324) ribosomal large subunit pseudouridine synthase D n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C585E  E=2e-51 s/c=0.89 id=34% cov=93%
-------------LVVRHLDEHVVVVEKPAGVNTvrHPAELEWSEErreldptlqdltqwavgRQLNRDARDLPRLRIVHRLDKETSGLVVFARSALAERELGMQFRKHTVVRRYLTVVPGIL--GTQTIKSNLVPDRGDGRRGSTKLPGvGKEAVTHVTPEERLP-GYTLLSCRLETGRTHQIRIHLSEAGHPVCGDKVYCKKangevfDDRSGAPRLALHATELGFEHPATSGHLHWTMPLP-
>UniRef50_C8PSH6(8-228:240) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSH6_9SPIO  E=2e-51 s/c=0.92 id=35% cov=94%
---------REEKLDILYEDPSLIVINKPSGLLSVPyqGSSVRTAADILERIMRskgaysKHHRPFAVHRLDRDTSGVMLFALNERTKDEFMRSWHTLVTERIYRAVAE-NPAEgglaDSGIIDAPLAYNAYNRAFVPTAEKHAHfdtvAARTRYKIIERGA-AYTLFELSLDTGKKNQIRAHLAANGYPIAGDPI--GHARTDPFGRLALHARSLAFTHPVTRKVMRFEVPEP-
>UniRef50_Q041R0(86-281:285) Pseudouridylate synthase, 23S RNA-specific n=28 Tax=Lactobacillus RepID=Q041R0_LACGA  E=2e-51 s/c=1.04 id=34% cov=89%
--------------KVVYEDSDILVIDKPTGQKTHPN--LDEKDTALNDCATYLGYsPFIVHRLDMLTNGLLLVAKNPAVVPILNRQLTNKTLHREYLAWVsKSNQLKQSGTISLSIGHDPDDQRKRMVRLD-GQKAITHYEVIK-ECENKELVKLTLETGRTHQIRVHLAALGAPIIGDPLYNPNYQNG--EKLQLTAYQLTFMGPFKFESKTVK-----
>UniRef50_A6G5N3(95-302:322) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N3_9DELT  E=4e-51 s/c=0.98 id=36% cov=87%
---------------------------KPAGLLSVPWDDRDDRDTLIERTRitlreregtrsGERDRLGVVQRLDKDTSGLLVFARTRRARKALEAQFRAHTIFRRYVALVHG--AAKAGVHESYLIADRGDGLrgswRGKSPPKAAKKAITKVRV-EEKLDGATLISCQLETGRQHQIRIHLAEAGHPLVGEPVYGRgyRGRRLPAPRPMLHAASLGFRHPVGDRPVRFEAPPpdDF
>UniRef50_C5DEF5(175-357:610) KLTH0C08756p n=2 Tax=Saccharomycetaceae RepID=C5DEF5_LACTC   E=7e-51 s/c=1.10 id=33% cov=81%
-------PPVTsRPIKIVFEDQDLFVIDKPSGIPVHPTGRYRFNTITKILQKQINGSVHPCNRLDRLTSGLMFLAKTPRGADHMANQLKAREVKKEYIARVVGEFPAERISVEKPLKCVEPRLALNGVCnseEEGAKEAKTVFTRVSFDGE-TSLVKCQPHTGRTHQIRVHLQYLGHPIANDPLYSNPQ----------------------------------
>UniRef50_A8ZT51(11-219:258) Pseudouridine synthase n=2 Tax=Deltaproteobacteria RepID=A8ZT51_DESOH  E=8e-51 s/c=0.97 id=33% cov=93%
--------PQWP---VLYEDNHLLALYKPAGLLVQGDSTGDPTLLELGRcwlkIRYNKPGkvfLGMVHRLDRPVAGVVLFCRTSKAAGRISAQFRDGVTAKQYVAVVEGVIPENEGRLANHIFRRGPTSHIIDVPTPKSREARLAFHVIDR-TDSRTLVKIDLETGRHHQIRVQFAHLGFPVVGDLRYGAP-APLPGRQIALLARRLTVTHPTLGHALTFTS----
>UniRef50_B4RVP9(24-245:265) Pseudouridine synthase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RVP9_ALTMD  E=2e-50 s/c=0.91 id=33% cov=93%
---------QPLHLPVLYQDEHIIAIDKPPGLLVHRSPIDKHETVFAVQTLRDQigQHVFPAHRLDRPTSGVLVFSFSADTAAKLGKQMMDKQVVKQYHAIVRGFV-HHTGYIDYALKYRYDKIAdKHKRPQQPPQPASTMYESLakfdvpepvgRYQSARYSLVRLSPSTGRKHQLRRHMVHIRHPIIGDTTHGDGKQNKFAKshfnftHLALSCTQMGFSHPVTQKWITI------
>UniRef50_A7NF15(67-295:309) Pseudouridine synthase n=2 Tax=Roseiflexus RepID=A7NF15_ROSCS   E=2e-50 s/c=0.87 id=30% cov=97%
-----YRDPVVTSAMILYEDADLIALDKPIDTYVeaTPWDAEGHLRAALAHFLEVRdgsaPPLHLAHRLDRDTSGVLLLSKAPDVNAALQRAFREGAVRKTYLALCAGLPAFDEIEIETGHGRGRggvfrvfPHEEIGRALPQGGtvKAMRTRLRVVRRM-DDAALACATPLTGRTHQIRLHLAFLGHPLIGDVKYGGPSTWRgvVVQHHHLHAWRLELPHPRSGTALIIESPAP-
>UniRef50_B6BGX6(75-293:308) Pseudouridine synthase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGX6_9PROT  E=2e-50 s/c=0.91 id=34% cov=90%
----------------VY--DEFVVFDKPSGVLIHP-QNRKTPYSLIDELKYQYGRdANIAHRIDQETSGLVLCAKNKESERDIKMMFEQRDMKKKYLALVHGELKE-SICIEEPLLRREDESAIVRMvvkVHEEGKASKTDIRPLKYFAEtDMTLVECSPYTGRQHQIRVHLFHVKHPIVGDPIYGQSEEDivkfldkeldaekrielSGASRLLLHANELEFE--LYDSVYNIKSKVDF
>UniRef50_A0Z298(102-296:320) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z298_9GAMM  E=4e-50 s/c=1.03 id=33% cov=86%
--------------SIIREESTLLVVNKPPGLAVHGGSGINVGLiETLRAMYETDRYLELVHRLDRDTSGLLLVARRASTLRNLHVLLRSNGIDKRYLCLVNGRWPAHLKRVDAPLEKfALPSGERRVKVAATGRQSLTTFRVVRRWS-SATLVEAKPVTGRTHQIRVHCQHAGFPILGDAKYADEAAvriadKLGLKRLFLHAASLNFR----------------
>UniRef50_B3DY53(4-232:268) Pseudouridine synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY53_METI4  E=6e-50 s/c=0.87 id=31% cov=95%
--------PEPPYLPrIVEECQDYLIVDKPPFLLSHPTRKKK-GPSILEWLQNLHPGIsfKLIHRLDRETSGLLVVAKNSAAAAYFGRQMEKRLIQKGYLAISWGELKADYLKIEAPLGYLGGAKGNEIVIRqgivPHGTQSVTEIYPLGH-GGGYSLLWVRPLTGKLHQIRVHLSTIRHPVVGDKLYGPNpsfflefakrgwteemEKVLLLPRHALHAAYLSFF--WKGDKKQFYSPLP-
>UniRef50_A1KW96(21-214:236) Pseudouridine synthase n=9 Tax=Neisseria RepID=A1KW96_NEIMF   E=1e-49 s/c=1.02 id=30% cov=89%
-------------LEILFRHQDFVAINKPGGISVHQDSGETGLARTLA-IQLGVERVWLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKG--GMEKSRRGMWKLTRNTENIAVTRFHSIS-IAEKLRLFILEPHTGKTHQLRVAMKSLGSPILGDSLYGGTESET----MFLYAWKIQFA--YQNRQIEIVAPL--
>UniRef50_A6ESW1(80-287:300) Pseudouridine synthase n=1 Tax=unidentified eubacterium SCB49 RepID=A6ESW1_9BACT  E=1e-49 s/c=0.95 id=30% cov=90%
------KPSIQIPLKVLFEDNHLAIIHKPAGVEVSGNKKYTIENALPSLLKKSNQkdaldRPLPAHRLDYPTSGCLLIGKTSETLQALHRMFEKREISKKYIAVTLGN-QITEGKIDKPI---------------DDKASLTTFKTLQTITskkyNALNLVLLTPHTGRRHQLRKHMMQLGNPIFGEKTYGDINDQGKGSGLFLHAIALSFKHPIDNKTLIIksEAPRKF
>UniRef50_D0LYX0(90-330:345) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYX0_HALO1  E=3e-49 s/c=0.82 id=37% cov=95%
----------ELVLDLLYEDDAIAVVSKPAGLPSHPLRAGE-RDTLANALVAHYPecaaigadprEAGLAHRLDIDTSGVLVAARTQKAWHALRAAFGSGAVEKHYLALTFGAPSSGEmdvalvqrGRRAHPVFRDdaGFGGFGGRGERGDALPARTTWR-IERRFGPACLLLCRAHTGRMHQIRVHLALAGAPIIGDSLYAPApetlsaaeredlaalSEHPEATRHFLHASAVTIPHPETGRALRIEAPLP-
>UniRef50_Q6MA84(5-215:219) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MA84_PARUW  E=3e-49 s/c=0.93 id=32% cov=94%
-------------ISIVYEDNHLFVLNKPAGLLTQPSGTAHDslESQAKAYLKIVYQKPgnvflEAVHRLDKPVSGIVVFGKTSKALTRLNASVRAKQTKKIYYAWVDSVPVDEQKTLENFLIHNDFQAQVVSSKHPQAKLAKLTYRVIERKSVG-ALLEIKLETGRYHQIRAQLAHLGCPIRGDIRYGS-QYPFTPHAIALHHESLEISHPIHQETMLFQTALPF
>UniRef50_B0G9B7(24-243:249) Pseudouridine synthase n=2 Tax=Clostridiales RepID=B0G9B7_9FIRM   E=3e-49 s/c=0.89 id=33% cov=92%
-------------INILYEDTQILVCVKPAGVATQSKRIGspDMVSLLKNHIsmtsgKSGEPYLAVIHRLDQPVSGILVFAKTPAAAKDLNRQLTTSGFGKHYYALVAGTPEPTSADLENFLVKDARTNTSRicQKGTADAKLAKLHYDLVDttFFADiassipvATSQLKIKLDTGRHHQIRVQLSGMGCPIIGDTKYNPDSPKLTARRtpLCLCAYQLEFRHPVTKKAMTF------
>UniRef50_C2G4G7(18-235:247) Pseudouridine synthase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G4G7_9SPHI  E=4e-49 s/c=0.90 id=30% cov=91%
---------------IIHEDENIIVINKPPFIASL-DEREGGEVNILRLAKKYYADAQICHRLDKETSGILLIAKNPETYRLISIEFEKRRVDKTYHAIIEGTHIFQDLKIDLPIL--NQGNKNVTIDRYNGKPAETIFNSIQYF-KHFTLVECKPITGRMHQIRIHLATQHAAIVGDSMYRGKpvylsqikkrgftlskdeEEQPIMKRFALHSKKVRFK--VADKSYEFEAeyPKDF
>UniRef50_A0LXI9(77-273:289) Pseudouridine synthase n=1 Tax=Gramella forsetii KT0803 RepID=A0LXI9_GRAFK  E=4e-49 s/c=0.99 id=30% cov=85%
-------------FEVLFEDEHIAVVHKPPGFPTSGNYFKTIENALPHNLSSSseidtLPYPLPAHRLDNPTSGILLCAKTNSSLIKLQEAFAQKQIQKTYYAIVSGEIKEK-IEIDSPI---------------DQKISKTILIPIEFYqieNKNYTLVELNPLTGRTHQLRIHLSENNTPIIGDNLYGKEETNLLKNKsIYLFAGKISFDHPLSKKLMTFQ-----
>UniRef50_C7NCB1(67-368:380) Pseudouridine synthase n=3 Tax=Fusobacteriaceae RepID=C7NCB1_LEPBD   E=5e-49 s/c=0.65 id=30% cov=94%
--------PIKLPLDIIFEDEDILVVNKEPFLLTHPTQKKADftlANGIVNHFFEKYGEVRVprfYNRLDMNTSGLIIIAKNSFAQAFLQN-FS--IFEKKYLAIVNGIIDDKGiARINEELAKDGEKHKIQdlekenlksevekinfgkvkkyeeiekiesnlnvenedskiaentnfdnkdnnlnlanksnfenenlkenktkiiierrifrdgenleRIIDTRGQYAKTAIKVLKvYPEKNVTLVECELFTGRTHQIRVHLKSIGHTIVGDELYGNGLNKELgINRQFLHAYKVKFIHPALKKEIELEIP---
>UniRef50_Q12362(152-334:591) Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=25 Tax=Saccharomycetales RepID=RIB2_YEAST  E=6e-49 s/c=1.07 id=33% cov=81%
-------PPVTsKPIDIVFEDEDILVIDKPSSIPVHPTGRYRFNTITKMLERQLGYSVHPCNRLDKPTSGLMFLAKTPLGADRMGDQMKAREVTKEYVARVKGEFPIGIVEVDKPVRSVNPKVALNAVCemsDENAKHAKTVFQRVSYDGQ-TSIVKCKPLTGRTHQIRVHLQYLGFPIANDPIYSNPD----------------------------------
>UniRef50_C6XLD8(41-240:272) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLD8_HIRBI  E=6e-49 s/c=0.97 id=38% cov=87%
------------------EDDSILAFNKPSGLACQtRSPADRTFDALLqVYVKRNGKRPRMLHRLDMLTSGVIIAARTKPATSFFQQTFERREAYKSYLAIVRGpAFEKSEGVIDAHLQRyqKEPNLALMRpcdVDGEGAQDARTRYLVLSSQNDYHFLL-LTPETGRTHQLRVHLEHFGRPILADPYYGTDalEGSYQPARLMLHAYRLLTPHPDGGE----------
>UniRef50_UPI0001978015(93-318:359) ribosomal pseudouridine synthase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001978015  E=1e-48 s/c=0.86 id=29% cov=95%
---------ENLSIDILYEDDDILIINKPPHLVIHDAPSVKDLTLTQwlklhahtLHTLSGRERYGIIHRLDKQTSGVLCIAKSLLAYEILPNQLKSRQMGRYYLAIID-TPLKQNLQVQCFMGRCPTNRLKMSKIHidenenpPKGvRDSKSSFVKLATSNDGLLeLIAIKLHTGRTHQIRTHLESLSRHILGDSLYGykpSAKSFFYEGRILLHAYILYLAHPKNGQNHTFKAP---
>UniRef50_A1AT77(74-266:310) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=A1AT77_PELPD  E=2e-48 s/c=1.01 id=35% cov=87%
---------ERPGLDILYEDDQIAIVNKPSGLAMHRTAEQETNlveqGTAFMAWRGTPCKLYPVNRLDRGTSGAVILAKSSTAAGIFGRQVKETGLDKLYLALVAGRPDGA-GVIDAPL---------------DGKECRTDYRLLAQ-GCGFSLLELLPFSGRMHQIRRHLEMIGHPILGDQRYSGRVVEELAG-FALHSFRTGLTMP-DGRRLVVCAPL--
>UniRef50_C8PTH9(13-219:240) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTH9_9SPIO  E=3e-48 s/c=0.93 id=30% cov=91%
-------------IPIVYEDEALCIVNKPYGIPVQGGAHISVCLTEILSKQLG-SEIFPVHRLDKETSGLLVTAKSADAARSCRALFESQAVEKEYLALCFGGFEPSAH--KKPVKKLLPEGIIDTPVVENGspKPASSAYKLLA-STDAYSLFSVRLHTGRMHQIRIHLAGIGYPIIGDDKHGNFALNkqlwktARIKKLQLCAYRLMF--PIGGKKCLFTVPAP-
>UniRef50_B8I5R6(76-268:303) Pseudouridine synthase n=2 Tax=Clostridium RepID=B8I5R6_CLOCE   E=4e-48 s/c=1.00 id=27% cov=86%
-------------FSVVYDDDNLLIVNKETGIPVHPDK-NQKEATLIDKLQSIYgPNLALCHRLDRNTSGLVIIAKNPATLEVMLEKIKNREIQKYYTCIVSGKMEKKNAELVDYLEKNEK-LSRVFINPEKTRNSvqiITRYRILA-SMNSLNLLEVELVTGRTHQIRAHLAYYGHPIIGDGKYGKNAENKQynAKYQLLCASRLTFN----------------
>UniRef50_B7AN06(42-275:297) Pseudouridine synthase n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN06_9BACE  E=4e-48 s/c=0.82 id=33% cov=94%
--------PDKIKLKVMYEDEDIVIIDKPSGMLSQKASAGdkslveyvtEYLLDTGSLTQKDLitFRPGICNRLDRNTSGLVVAGKTIKGLQEMSEAFRDRTLHKYYICVVAGRINERS-RVSGYLVRDEKTN--KSTIYADYKEAmdnaeadminniETEYIP-AVSNDNFTLLKVKLITGRTHQIRAHLASLGHPIAGDVKYGSRQinkrmsDQYHIKSQMLHAYEL--DYPQRGLCVRTDIPKEF
>UniRef50_C1E0I0(74-305:318) Predicted protein n=2 Tax=Micromonas RepID=C1E0I0_9CHLO   E=5e-48 s/c=0.83 id=33% cov=91%
----------------LWEDEHLAVVSKPAGMLTHPNEASGGATRTLVEALLDAFGdeglsaingadaRGIVHRLDKPTSGAMLVAKTDLAHAMCVAAWYQRKVTKTYLALVEGVPGRRRGRRRGDDGDAMEG---TCVAPADGRPARSDWRVVETFGEEdgddaeqlCSLVEVTPRTGRRHQIRQHMgMALDAPLVGDPLYRrgkRPNTPATAAPflvgkpgsvLFLHSAALALRHPVTGEALSFSDPLP-
>UniRef50_D2R6S8(2-218:230) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6S8_9PLAN  E=5e-48 s/c=0.88 id=35% cov=94%
--------PRTPSLDILHEDNHLLVINKRPLLATQG--VAEGTPSLVTEVQQYLKvkykkpgnvYVGVVSRLDAHTSGVVVLARTSKAASRLAEQFREQGVEKTYWAAVEAAPEPASGELVSWVVKDDKNRRMTIADRKLAgcQKAVLTYETLEQ-NKSAALVSVKLETGRKHQIRLQLAdELSLPVIGDRKYGSRIE--FPEGIALHARELAFDHPVGGKRLSFVAPLP-
>UniRef50_B1XIP1(44-273:282) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XIP1_SYNP2  E=7e-48 s/c=0.83 id=31% cov=96%
--LEYHRPPwEEPDvplnFQILHQDPHFWIIDKPAGLPVLPA-GNFLENTLLAQLKRQFPDETPVpiHRLGRGTSGLMILGRSPLGRQSLTRQLREHQITKIYRAVIPAGDYPDQITITTPIGKIfHPSLGTIFAATADGLSAHSEMRVLERLAK-VSRVEVQIFTGRPHQIRIHMAAMGFPLVGDRLYlpGGlpaiyeDANHSPLPGDCgysLNAYYLKFQHPHQDKPIDF------
>UniRef50_Q5M721(88-360:369) RNA pseudourine synthase 5 n=13 Tax=Embryophyta RepID=PUS5_ARATH   E=7e-48 s/c=0.70 id=33% cov=97%
-----WKEPDTPYsLEVLYEDDDLIALNKPSGLQVLPGGLFQQR-TVLTQLQwcfgkndsyigsRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEgtslvgsgnldqecgtgRKLSKIYRALADGIVEEDEVVIKQPIGvvRYPGVAQGLYVASPEGKPAFSKVFVLERDREkNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYvAGGQPKCFDPDLvddaaafaedggyrrpnqavpgdcgyHLHAHQVELPNLLnTHKVVKIVAPLP-
>UniRef50_Q7UWB9(15-232:232) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UWB9_RHOBA  E=1e-47 s/c=0.88 id=37% cov=93%
---------QDPAmIEILWQCHACVVVNKPVGL---PTTSPKGTDSLESCLREQFAQAGNpvsyltaVHRLDRPVSGLVLIALRKKAARLLSEQFRLRHVQKKYIAMVQGNALEAckqEPWHDT--IAKLTDEARVEIVgldSTDGRQAETKVSFLEYDSEsDTSRIELRPVTGRMHQLRIQSAHRGHPIVGDPLYGTAEDESA---LRLVAAKLSFRDPTNGRAVEVELPElPF
>UniRef50_A4CVN5(20-210:215) Pseudouridine synthase n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CVN5_SYNPV  E=1e-47 s/c=1.00 id=38% cov=87%
----------------------LMVVDKPAGLLCQPGLGSHQQDSLISRLQLACPALRLVHRLDRDTSGLVLLAKDPDMLRLLGMFFASRRVRKLYVADVQGQMKNVSGLIGLPLARLKRQPPTYGV-HPGGKACVTLWRRLKLM-ESSTRLWLCPRTGRSHQLRAHLAALHHPIIGDPIYNPGCAVG----LRLRAMALRFPDPDdpSGQ-VRVRAPWP-
>UniRef50_B2GFH2(98-311:326) Putative pseudouridine synthase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GFH2_KOCRD  E=2e-47 s/c=0.89 id=33% cov=93%
-------PPV--TLDVLHEDEWIMAVDKPHGLCSTPkGENVRRSVVVAARCQFDNDEISALHRLDRSTGGVLLLCKRAEDRSAFHRLFQERTVRKTYWA-VAGV---NERVGEQTVRVESRIRKIQGVVQAFEEPgevnAVTDVRRVETFTDAdgtWGLYEIAPLTGRTHQIRVHMTSLGLPLRGDKLYPQPrqdfDVEDPENPLQLIARSIEFVHPVTGRAVRIDS----
>UniRef50_B4WMC0(75-324:328) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMC0_9SYNE  E=2e-47 s/c=0.76 id=30% cov=96%
-------PAVPLDFDVLYEDEDLWVINKPAGLPVLPsGGFLEHTLLYQLRVRYRDCQSAPVHRLGRGTSGAMLIAKSHIAKVQLSEQFRKRsanlssnttpntastcTLGKTYRALIAPTTPDqlrDRFICTYPIGKLPHTRLGY--IYGHLRDAHSHEKTIGpinsmvsrsegsvlRRRAHSTLVEITIQTGRPHQIRIHLAAAGYPLLGDPLYsagGVPDPHGYALPgdcgYHLHAHRLQFAHPRTGQSIAITAPPP-
>UniRef50_C5ZYE3(67-317:319) Pseudouridine synthase n=3 Tax=Helicobacter RepID=C5ZYE3_9HELI   E=2e-47 s/c=0.76 id=33% cov=95%
--------PNSIGLKPIYENEDFALFNKPAQMLIHPkGRFFHH--SLMDEVREYFGtEASLIHRIDKETSGLVLVGKHKRSIVELGELFANNRIKKKYLALIKGKMCKTSKIVgdfcllmplslqekggDLSVRSVFLGQNLRKDSKLLGfRDAKSEFEILGEFGGNT-LLKVYPITGRTHQIRVHLFSLGFPILGDPLYGcedwqsreyldsefieenrdfglcaeKRKEYFGADRLMLHAYSLEFS--YKGREYYFRSCEGF
>UniRef50_D1B0V0(73-288:302) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0V0_SULD5  E=3e-47 s/c=0.88 id=35% cov=89%
----------------IFETEDFAVFDKPSGVMIHP-RKRSDGYTLNDEIKSLYGKdANAAHRIDKSTSGLVLVGKHKQSEIALKEIFATRKVQKSYIALVKGHLKE-ELLIDEKLKRDVETSQIRLKVHvdERGKPSQTKVIPLHYFEDKdATLVQAFPYTGRQHQIRVHLFHVKHPIVGDMIYGVEEedaeryldgsmsaeeqyEKTLSSRLLLHAYSLSFN--FKGVDYTIES----
>UniRef50_C7RHE5(67-257:277) Pseudouridine synthase n=3 Tax=Anaerococcus RepID=C7RHE5_ANAPD   E=3e-47 s/c=0.99 id=28% cov=85%
-------EPKKGGINIVYEDDNSLVISKEANITV----NSKNQISLSNYIANYFidsgqeSKIRLVNRLDMDTSGLMLIAKNKYSHAYYQKQLEENTMKKKYLAVVEGMLDIDSLYENKF---SYNEKKKNYEPSDKGKISRTYFKSIRINCD-FSIIECEILTGRTHQIRASLTDLGHPIWGDKLYGSDKN---LDRFLLHSYRLEFT----------------
>UniRef50_B4UMB0(71-298:312) Pseudouridine synthase n=4 Tax=Anaeromyxobacter RepID=B4UMB0_ANASK   E=4e-47 s/c=0.83 id=29% cov=95%
-------PQPDAPLSVLLERPRYLVVEKPAGVAVHP-LAPGEGGTLANAVAARHPECaeaspepregGAVQRLDLETSGCVLFARDPEAWEALHAQLGAHTVDKVYLALAVGRL-PAGGVCSVPLAQRGgrvvpaPDLEAEERLQARGlrpRPAETHYEPERRFADHT-LLRVRIVTGVMHQIRAHLALLGHPVAGDALYGGAAAgLPGLERQFLHAWRLAFDDPDGAGRVAVESPLP-
>UniRef50_B7G0C6(1-216:216) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0C6_PHATR  E=4e-47 s/c=0.88 id=35% cov=86%
---------------VIYSDLYLAIIDKPQGMAVQGGENQTLGRSDLLLPLALKPgtkvpwptqnsildsaltKPRVCHRLDAGTGGILVLAKTRVAEVKLKQCFADRACRKRYRALLYGKLPKQEGTIEASL---------------SGKPAETHYSVLRYVRsldfGWLTLIDLRPVTGRKHQLRRHMQGMGHAIYGDQRYGPKleprpneGSEDPHSRLCLWAMEIALPHPSTGEYKTFTLPS--
>UniRef50_Q6AJJ4(10-228:238) Related to ribosomal large subunit pseudouridine synthase D n=1 Tax=Desulfotalea psychrophila RepID=Q6AJJ4_DESPS  E=5e-47 s/c=0.86 id=33% cov=95%
-------PPkkyQPRGLPIVYEDNDIILVDKVAGLATT-SRDKDNENTAYFRLtnyvkkgvAKSSNRVFLIHHVDKEASGLLIFAKTEKARRHLLDNWSDFNV--SYVAAVHGVPVQTEGVLRANLAENMIHKMYVTVAGEKTRPAETEYSLLQHSA-NYSLLSLRPKTEVKHQVRVQLADKGHSIIADKIYGVKSDE--MKRLALHAAHLTITHPHTKKEMSFESrvPGHF
>UniRef50_A8BWX6(3-217:250) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Giardia intestinalis RepID=A8BWX6_GIALA  E=7e-47 s/c=0.88 id=34% cov=90%
--------------SVVFENDDYTVINKPPNLHI----DGDYPQTVRSWYLATRGRApRFVNQLDYPTSGLMVIASSRKAAGFAGREFQARAVAKTYVALVVGDV--ASQTISAPIADDAADPRQFCMCiSETGKHSETHVERIAAIPEDlrelspslpqglYTLVVLRPVTGRRHQLRLHLAHIGHPIVGDQLYGGGltdtNQCGEEERLCLHALMLSIPN-LSGLPL-LEAPLEF
>UniRef50_A6GAA8(88-301:311) Pseudouridine synthase, RluA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAA8_9DELT  E=9e-47 s/c=0.88 id=32% cov=92%
----------------VHRGEDFVVLDKPAGVPVSAvretcvGSLSEALIHQLESEGLERPYVGVVHRLDQGASGLVLFTIRDVANKSLHKQFRDHEIRRGYRVRVTGEP-PAQLRCDAPLIKLRSGGVKVGSPGDGrSKPATTHFRHVARVDGEAGpehLLDVEIETGRTHQIRAHAAHLGFPIVGDRRYGADgegEAGSDHSRLCLHARSLEFEHPLTGAPQSFTCELP-
>UniRef50_A5ZQH2(41-270:288) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQH2_9FIRM  E=9e-47 s/c=0.82 id=32% cov=93%
-------------LDIIYEDTDILLINKPAGMLSQPDDTKEpsmveyligylLQNGSLTEENLRTFHPSVCNRLDKNTSGVIAAGKSLAGLQELSTLFHDRTVHKDYLCIVKGKLTRSR-HIRGYLHKD-ANLNKVSVSPTKEKDAQpieTQYTPI-CNNEHATLLKVRLITGRTHQIRAHLASEGHPLAGDAKYGSQEfnryfrDHYGLKHQLLHAYRLTFPelegklHNLSEKHFEAVLPVQF
>UniRef50_B4RU15(3-235:279) tRNA pseudouridine synthase A n=2 Tax=Alteromonas macleodii RepID=B4RU15_ALTMD  E=9e-47 s/c=0.81 id=32% cov=89%
------------PIPILFEDANLLVVNKPVGVAMHDaldsksgdpkdnalaiehedtdknaaqkessackGEDTLRTDGIVTQLKKQlsLSELHLCHRLDTGTSGCLCLAKNAKTAAEIGELFSSRRIGKFYLALSEHKPKKKQGAI----IGDMKNRRggQRILLKSQENPAITQFFS-HAAKPGTRGFIVKPHSGKTHQIRVALKSIGAPILGDSLYGG----APSDRLYLHAWHLRL--PLSAGELTITAPFD-
>UniRef50_UPI0000588046(149-383:414) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000588046  E=1e-46 s/c=0.80 id=35% cov=86%
---------------VIFDKGDIIALDKPYGLPVHGGPGMKHSiDSLLPQLAwtlnnkggGNTEELHLIHRLDKETTGVMLLARNERTARVLHEMFRKRQIIKRYLVITVGIPSPKEGILDMPMIEKEIDGKHRMVIKPdmadlypdtigmrsgrksrDSKEAITRYKVLSERG-NCALVQLEPETGVKHQIRVHLAqGLGCPILGDHKYshhdrlapqkltagilhslGITQPKARTVPMHLHARQLVIP----------------
>UniRef50_Q11QN3(10-228:240) Pseudouridylate synthase n=5 Tax=Sphingobacteriales RepID=Q11QN3_CYTH3  E=1e-46 s/c=0.86 id=34% cov=91%
---------------IIFENDDYFFINKPPFISSLDERTGG-APSIIRMAKEYWPDAQLCHRIDKETSGVLAVAKNPAAYRHLSMAFESRNVTKEYHAVVNGTHDLDGVDVYLPILVLPTGTVK--IDKSKGKLAETIFFTIQ-AYKKATLVRCLPITGRMHQIRIHLATLGASIVGDETYGGKplflseikrkkfnlkkdsEERPLIQRFALHANSLIFTD-MNEQILDIKApyPKDF
>UniRef50_UPI000050FD43(92-324:332) ribosomal pseudouridine synthase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FD43  E=1e-46 s/c=0.81 id=32% cov=93%
---------ERIPFEIsvVFEDDDLLVVDKPHFLASTPnGRFVRECVVTRARLDFDQPDLVAIHRLDRVTAGLLILSKRPETRGRYQRLFQDRLVTKTYRALAA--MPPAD--LELPLVKESRLvkpRGGRQVLEVEGEPnAFSKISLLGertppspRWSDATeppprrsvgecpsiGEYQLEPLTGKTHQLRVHMNSLGLPILGDPVYPvdrAPDPYDFSSPLQLLAASIGFDDPLTGRPRRFES----
>UniRef50_B7CDE9(45-247:253) Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDE9_9FIRM  E=3e-46 s/c=0.92 id=28% cov=90%
----NYEP-----VDILYENTFLIVAFKPPFLLVH--DDGNNQDTLQARVngylqlnQNKYP-AQAIHRIDYETSGLVLFCKHPFFQAYCDKNMEEHHIKKEYIALVQGHTNYKNKKIISNIARDRHNAKKM-IIHPNGKESVSIFNTLKNYKD-CSLIQVTILTGRKHQIRVQCASLNHPILNDSLYGGKKIDNTG--LLLQSHHIQFND------VDITCPQE-
>UniRef50_A3DGV1(80-291:320) Pseudouridine synthase, RluA family n=3 Tax=Clostridium thermocellum RepID=A3DGV1_CLOTH  E=3e-46 s/c=0.88 id=24% cov=88%
----------ETAFSVAYEDSNLLIVNKKQGIPVHPDRTQTENTLIdfvkeYLKLKGEFEEnsgftPSLCHRLDRNTGGLVMIAKNSSTLHMVLKKMKSGEISKYYQCLVKGKMEKKEDILKAYLEKDEK-KSRVFIKDTKSKNAveiITGYKVLSYKelpdiGEGISNLEVTLYTGRTHQIRAHLAHIGHPVVGDGKYGINTFNRLlgAKYQALWAYKLKFD----------------
>UniRef50_A2U235(1-220:234) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A2U235_9FLAO   E=3e-46 s/c=0.85 id=31% cov=90%
-------------LEIIYEDAYLLCVTKPNNVLVHhayHSRNMADEKSLLQLVSEEtGLKVYPIHRLDRKTSGAILLAKEKEYVAKFQDLFTKNQIQKIYYGVVRG-FSPSTKRIDSPVKGRDANVH---------KEALTELKTLAkitldiavkpYDSSRYSLIELFPKTGRMHQLRVHSNKISHPLIGDAKYGDKnhdmmfEQNFGFKNLFLHAGKLEFIHPYTQETLILKStfPTDW
>UniRef50_A8RUB2(119-348:366) Pseudouridine synthase n=3 Tax=Clostridiales RepID=A8RUB2_9CLOT   E=3e-46 s/c=0.81 id=32% cov=94%
-------------LDIVYEDQHILVVNKPSGMLSQKAKDSDMSLNeyILNYLidsgklpisQLRTFKPSICNRLDRNTSGLVVAGKSLAGLQVMNEVFKDRSIHKYYQCLVAGEIKEKQ-LIAGFLKKDESTNTVSIFPleVEDSVPIMTEYLPLS-GNKTFTLLQVTLITGRSHQIRAHLASIGHPIVGDYKYGSRSLNDAVKKkyavrsQLLHSWRLvmpeTLPAPLKhlrGEEFTARLPVIF
>UniRef50_D1B3J6(55-237:242) Pseudouridine synthase n=3 Tax=Campylobacterales RepID=D1B3J6_SULD5   E=3e-46 s/c=1.02 id=30% cov=84%
------------PIKVLFEDEYIMAVDKPAFITS--------------EEVAEIKKLPLLHRLDRETSGVLLLTKDDEFRQKAVNAFKKREVHKEYIAIVEGKVVEAT-EVNAPILTIKKGNTAYSKISPDGKEAISYIEPLMIEGKR-SKIKVTIETGRTHQIRVHLKSIGASILGDTEYGGRPH----KRLMLHASKIILL----GYIFQSKEPEDF
>UniRef50_B0N6U2(87-298:328) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0N6U2_9FIRM   E=8e-46 s/c=0.87 id=30% cov=86%
-------------FSVLYEDKHVLIVFKPAGLLVH-EDANESINTLTNQVLSYLASkneldlsrentfmPGPVHRLDRNTSGIVIFGKTLAALQNLNEMIKQRHcIEKKYLTICRGQLNHQRNL-HGYMIKleNQAQVKLVKKDYPGALTMETIVRPLKYNCD-YSLVEVTLITGRMHQIRVHLSSIEHPIIGDRKYGDFELNKYIKKtfglnnQLLHAYKIKFV----------------
>UniRef50_D1SY25(115-317:328) Pseudouridine synthase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY25_9BURK  E=9e-46 s/c=0.91 id=34% cov=89%
--------------TVLYQDEHLVVADKPHFLPVVPtGRYLQHTLLVRLKRRLGLDGLSPVHRIDRDTAGLVLFSVQRATRGRYQALFRDRAVDKTYEAV-------APWRVDVAFPRERSSRIEespqffRMHEVPGEANSLTRMEVLDVDG-AWARYRLSPVTGRRHQLRVHMAALGLPLRGDAFYpevNDPPEGDFSRPLQLLARAIAFTDPVTGRERRFES----
>UniRef50_B9DIP6(70-275:294) Pseudouridine synthase n=61 Tax=Staphylococcus RepID=B9DIP6_STACT   E=9e-46 s/c=0.90 id=26% cov=90%
--------PDYQPIDVLFEDQYFIAVSKgkkqncaPSREHPHGSLIEQVIGYLKDQAADGNYQsiPHIVTRLDRDTSGIVLFAK----HGHLHHRMSSTEMKKVYHCICNGKLENTSKIV-APIMRAGDSIIERKVD-QAGKYAATSYQPI-NASEQYTLCEVRLHTGRTHQIRVHFQYINHPIVGDGLYGG--LHTFVTGQALACCYLSFKHPITHEQIELR-----
>UniRef50_B5Y592(1-175:175) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y592_PHATR  E=1e-45 s/c=1.05 id=43% cov=76%
-------------LKIVHEDEHIIVVDKPSGVLTVPSDKNVPS---LAQAVFDHCQPTevtldqmVVHRLGMDTSGLIVLAKTMDTVRQMNALFRTRKITRQYEALVVGHLPQHGGLISLPLMRDYEHPPYMRKLLEMPKESLTKYEVVNREdmdGTPVSRVALTSISGRTHQLNVHLAAFGHPIVGDSVY--------------------------------------
>UniRef50_Q11NL4(11-217:223) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q11NL4_CYTH3   E=1e-45 s/c=0.89 id=33% cov=89%
---------------ILYEDNYILVVNKPCSLMVEPDRNGH--PNLLQQVQKYVKKslhpnkevyVQHIHRLDRPVSGIVLFAKKKSMLKELSEQFAQRTVKKYYQALTRKVTTNGKGALNHWHFKDSKN--KKAILYKEEQqetSAVSLgYSTSDYNADYTLW-DIQLNTGKYHQIRAQLSFEGYPILGDECYKSTDVYAPNA-IALHACKLEFVHPVSKESMRLEA----
>UniRef50_A9RZN1(1-228:283) Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RZN1_PHYPA  E=2e-45 s/c=0.81 id=36% cov=85%
------------------QDAEIIVINKPSGLAVQGGSdVVKSLDSMMeAALSYNYNEgPRLVHRLDKETSGALVLGRTHQSTVFLQALLRNKTekisqaPGRCYLALVIGVPEKKEGRISAPLAKvvsDSGKLDKMRVVhgsHPNAQEAITDYKVLgSSLFAGCSWLELRPLTGRKHQIRVHCAEvLGMPIVGDYKYGwralrlwpptdrtedtkssvlglreSGHVWSSKPYLHLHCRQLILPD---------------
>UniRef50_A4BGF0(83-297:309) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BGF0_9GAMM  E=2e-45 s/c=0.86 id=30% cov=96%
---ENPNEPDIPfDADILYEDEQILVVDKPHFLSTTPvGQFMKHTVTTRLRNRTGNMAITPAHRLDRATAGVLLLTKQRAVREAYQSLFLRREVEKTYHALCHPNPElPEQFEINLHLKENTDN--MFVRVLDAPPNSHTSAKRLARHSTGD-LYELRPSSGRKHQLRCQMAHLGAGIVNDIWYPvaqDPSPDDFSRPLQLLAKKLAFIDPFSGQRREFVS----
>UniRef50_B5JG19(12-224:262) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG19_9BACT  E=2e-45 s/c=0.86 id=33% cov=88%
--------PEELETWILQNDDHVLLINKPALLVCHPSKNGPW--SSLAGACREYlqsERSHLVSRLDRETSGIVLFAKHRLKSRHLQMALEQRKVSKTYLAILEGELKE-ETLVDAPLGPDTQSIVHSKnTVRRDGRkqEAQTKYTPL-HSNGRYTLAKVDPITGRKHQIRAHALHIGHHIVGDKLYGPDEGLFLdfiedgwteqmakilpINRHALHAYRMVFD----------------
>UniRef50_Q04TZ1(79-376:377) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04TZ1_LEPBJ   E=3e-45 s/c=0.61 id=32% cov=97%
-------PPVRKDYKILYEDEFFVAVDKPGDLPVHPA-GKYRKGNLLTLLKEsgKFENLFTVHRLDRETSGVVLFAKDSKAASLLSGLFSSRKIQKYYITKVYGDFPRrkiAYGVLKpdvSSIIRKKRkffllksnflKRNKKYFLENSFSPeeefCLTAFRKIESYfiktqfqeiesdvgelkvrsrkkklnfeslqtqnekneepkvrsiypkHEFYSFVLCKPITGRMHQIRAVLYGLDFPIWGDKLYGKDEevflefiegknpdltERLGMERQALHAYAIRFNHPITNRKMKIVAsvPKDF
>UniRef50_Q86P70(376-554:739) RH45372p n=20 Tax=Neoptera RepID=Q86P70_DROME   E=4e-45 s/c=1.02 id=30% cov=77%
------------PIKIVHMDEDIVVVNKPASIPVHPcGRYRHNTVVFILAKEFNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEYICRVEGVFPDGIVECKEPIEVVSY-KIGVCKVSAKGKDCTTTFQKLSQNGT-TSVVLCKPLTGRMHQIRVHLQYLGYPILNDPLY--------------------------------------
>UniRef50_Q7VI73(66-293:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=1e-44 s/c=0.79 id=31% cov=94%
----------DIELEPLFFNEDFCVYDKPHNLLTHPkGRFYHYSLNDALKLRFGN-YANAIHRLDKQTSGLVLCAINPQSEPELKELISTRQILKTYYAIVEGKLTQ-ECLIDEPIAlqkYKGTDLSIKSIISPYGKPSRTKLYPLAYhSPTDSTLIRVLPLTGRTHQIRLHCAHIGHRILGDPLYGTKeeysrfylespalpphqyESYFGAPYLCLNAHTLAFS--FKGKSYYFTSCHNF
>UniRef50_B4D302(75-254:289) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D302_9BACT  E=1e-44 s/c=1.01 id=31% cov=77%
-------------IRICFEDAALLVIDKPPDLLTI-ASEAEQEKTVYFQLteylrgndVHSRERVWIVHRLDRETSGIMVFAKTPQAKGLLQTGWD--KAEKRYQAVIEGSLPNDKGTFRSYLDETDPFRVISVPRTPTTRHAVTHYRVLKRGKGRT-LVELTLETGRRHQIRVHLADAGCPIVGDKKYGAK-----------------------------------
>UniRef50_A8TF58(100-362:372) Pseudouridine synthase n=1 Tax=Methanococcus voltae A3 RepID=A8TF58_METVO  E=2e-44 s/c=0.69 id=27% cov=95%
------------PMDIMYEDMDILVVNKPKNMVVHPTKTIKSGTLANAIMdyqnhnksESERFKIRFINRIDMDTTGIVLIAKNSFAHQKIANQFQ-GCMKKEYLAVISGNMDVDnldtnlnnslDTELNNNLNDEKYNLPlnlRLKIYKEnNSKFSViifdrdtdeliehTNFEIIKNTKDtkdnkdnkdteisnNFTLIKASLITGKTHQIRRHLAYLGFSIVGDELYTNNNElndNFKNYSLMLHSYKTTFIHPRTNELIELieEPPKDF
>UniRef50_Q1QTG8(5-222:261) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q1QTG8_CHRSD  E=2e-44 s/c=0.83 id=31% cov=93%
-------------LPVLYQDERMVAVQKPSGMLVHRSPIARDARVFALQTLRNQlgRHVYPVHRLDRPTSGLLLFALDPEMAQALGEEFTAHRVHKRYLAVVRG-VGPEQDLLDYGLREEDGSRPKAEMPELEAWTAVRRldsvelpVRIDRYPQVRYSLMEARPWTGRRHQIRRHLARRGYPIIGDAKHGKGahnrffRERLDSPRLLLAAVGMTVWHPEQARTLQLDAPL--
>UniRef50_UPI00016C4D9D(126-339:354) pseudouridine synthase, RluA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4D9D  E=2e-44 s/c=0.85 id=35% cov=72%
-----------------------------------------------------------VHRLDRDTSGLVVFARTRAAGENLTAQFRKHSTERRYLALTRGVPKP--GRIASVFVSDRGDGRRGTTTDlaADGKRAVTHVAVLEPLG-PFALVECRLETGRTHQVRIHLGEAGAPLCGEGVYDRPidgqplPDGSGAQRPMLHATRLGFAHPDTGAAVSWEVPPpeDF
>UniRef50_UPI0001BC3376(6-216:222) putative 23S rRNA pseudouridine synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC3376  E=2e-44 s/c=0.85 id=29% cov=93%
---------------IVYEDDNIIVCNKPVGMPSQSDRTFEQDLVSYVLTHRteqnEPAYAAIINRLDKPVGGLVLFAKNKKAAAGLSAVSGEHGIEKNYYALVKGSPC-DKGEFTDYLLKDGKNNISTVTDKDTkgSKKAVLLYEKLGEKtidGEKYSLMRVRLLTGRHHQIRVQFSHHGYPLYGDIKYNSDFRNRRDVSPALFAYHLSFKNPVGADRITVEAEPE-
>UniRef50_C5TJ50(96-303:307) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=C5TJ50_NEIFL   E=4e-44 s/c=0.87 id=31% cov=89%
--------------KILHIDEHLIVVDKPHFLPVIPsGRFLRETLLTRLRLRSELQHLNveditPIHRLDKDTAGVMLLSLNPATRRDYQTMFQEKTVQKTYEAV-----APTRTDLDYPLdlsSRMERGEKFFLTRETEGEPnAHTTIELIENRG-AFSLYRLTPHTGKKHQLRVHMMSLNMPLMNDALYPNPlaaGDEDYDRPLKLLAKRIEFTDPVSGEIRVFES----
>UniRef50_Q25257(510-728:741) ORF C n=5 Tax=Leishmania RepID=Q25257_LEIDO   E=4e-44 s/c=0.82 id=32% cov=89%
-----------PIIPVLYEDDDVLVVDKPAGLATsrHGlsctqlGTPTTDLISVLLatdrvgALARGIFRQGQVHRLDAETSGCLLIAKSDVAADSLRHQlgtsaaFSHHS--KIYHALC---------VVLEPSLRNV--RLHDDIIDAADPKIRTRYRVIRFFPKHrVAWVECRIQQGKKHQIRRHLASRGLPILADLEHGGAVcCQSMISRVALHAHSLSFIHPVTADPITAAAplPADF
>UniRef50_D1KBQ5(99-268:277) Pseudouridine synthase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBQ5_9GAMM  E=5e-44 s/c=1.05 id=31% cov=78%
---------------------------KPAGVFSQGSKWGDHCALTRLVEKKLDRPTFLVHRLDRATSGLMLIAHTKNMARDLSKMFADRNIDKTYLAIVEGKFTKEKITLEKPI---------------DGKNAVSHVTLLESEKFK-SLLKVKIETGRKHQIRKHLSEFSHPIIGDRLYGNA-AKNHPEDLQLQAIQLIFNCPIDKQTVKIK-----
>UniRef50_A8EW74(61-245:251) Pseudouridine synthase n=4 Tax=Epsilonproteobacteria RepID=A8EW74_ARCB4  E=5e-44 s/c=0.97 id=32% cov=83%
--------------KVIFEDKDILVVDKPAFL-------------TADEVCKKFENAILLNRLDKETSGVMMFAKNEEFQKKAIKEFQANRVYKEYVAIVEGKVV-DEIEIDKPILTTKDRGMaKSKIDVKRGKPAKsTVYPLL--VEGNKSKIKVVIESGRTHQIRVHLNSVGLPIIGDAIYGRVSSN--VNRVLLHSKITKIFD------YTFEAhePKEF
>UniRef50_C1N7S8(32-275:360) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7S8_9CHLO  E=6e-44 s/c=0.73 id=32% cov=95%
--------PDPAPLTVLYEDEHVLAVDKPPGVMTYPAHRLR-GGSVVNRAVHHLRgvtrdgsgggagfgfgaatEPIAVHRLDLETSGVLMLAKDKPSASALQGAFERREARKTYLAVCAiledAANASDESDDDFDFERHPGHRRRERrrravhTRGDAGREAREH-RFTGKRIVGTALVLARPLTGRTHQVRLHLAHAGLPIVGDALYGyddalRPASGGFEGRMALHAWNLAVKHPRTKNTMRLAVdmPAD-
>UniRef50_C0QYU1(90-328:345) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QYU1_BRAHW   E=6e-44 s/c=0.75 id=25% cov=95%
-------PEVDKNVTIVYDDGDLIIANKPANLPVIPSGKYYH--NTLHTIVKNmlNSNINMLNRIDRETSGCVVLSRSSKSASNFCAMLAGRKVngkqykrnsiKKTYIAVIEnAKDIEDKFTVEGYMLESGHEYYRRfqtlhKENVEGSKYSKTSFKTIKRIGD-YAVVMARLYTGRMHQIRVHLYSKGFFMVGDKIYGkyGPKVfddfiekgiipEGFFNRQALHAYSLKFNHPITDEIIKVKAPLP-
>UniRef50_C3WCY4(90-286:292) Pseudouridine synthase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCY4_FUSMR  E=6e-44 s/c=0.91 id=29% cov=90%
---------------IVYEDDRVLILNKKANMVMHKGSGHEYGVSEILKEYLNNPNFNFVNRIDKATSGLVVGAKSLVVTRELSEEIRERKVDKKYYILVEGKVKRREFQIKSYLKKLEDKVVELEQYEEGAKESLSFFKVVEY-GKNCTLLEGTLGSGRTHQLRVQLASMGNPIIGDSKYGKGKEKM----MYLFSHYLKIE--KYGIEIDLPIPKEY
>UniRef50_A1SV26(84-289:303) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=A1SV26_PSYIN  E=7e-44 s/c=0.87 id=31% cov=90%
--------------TILFQDEHILVAHKPHFLAVTPG-GKYVNECLQNRLRRstGIEALQTLHRLDRVTAGLVMFSVNPDTRHRYHQLFKTRQIHKSYQAIASisdaENLTGQEWEIKNRIVQGEP-RFRMRV-TEGEANSHSVIRCLRQSAQ-TALFELTPVTGKTHQLRVHMQALGLPILNDKYYPQLEplsADNYAAPLQLLAKELQFIDPVTEKPRCFRS----
>UniRef50_A2R658(127-290:484) Similarity: patentmatch against protein AC A46560_1 Trembl n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2R658_ASPNC  E=8e-44 s/c=1.09 id=34% cov=74%
---------------IIHEDDDLIVIDKPAGVPVH-SAGRYHYNSVLEIMRsQRHPEwvPRPCNRLDRLTSGVMFLGKTAKAAENMTGKLKARTLQKEYVARVKGKFPDGVIVCDQPIMSVSPKVGLNRV-RATGKEAKTKFRRL-------AIVHCLPLTGRTHQIRVHLQFLGHPISNDPIYSNRK----------------------------------
>UniRef50_D1J3S4(187-377:476) Whole genome shotgun sequence of line PN40024, scaffold_180.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1J3S4_VITVI  E=8e-44 s/c=0.93 id=37% cov=76%
----------------LYKDPAIIVVNKPPGLPVQGGiGIKRSLDELaATYLRYDCSEpPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKTfgasnndidtkkriLQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSEritivdnVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEvLGTPIVGDYKYG-------------------------------------
>UniRef50_A4A0R6(27-235:242) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0R6_9PLAN  E=1e-43 s/c=0.85 id=31% cov=92%
---------------VLYEDNHLLAISKPALLATMGAQEGEPSAAQWAkdYLKRTYNKPGNVYvgivsRIDAHVTGVLLFARTSKAASRLSEQFRDRSTVKEYAALIPAGPKIRNGEL-VDWIRKEDRLHRMVIAAEGTADAdRAEMEILEqQRRPNCQMLHLRLITGRKHQIRLQLASRGAPILGDKKYGS--TDRYSPGIALHAHRLVFTHPTLKTMVTIEAPLP-
>UniRef50_C1A2U5(89-308:360) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C1A2U5_RHOE4   E=2e-43 s/c=0.81 id=32% cov=94%
--------PVPFHEEILHLDDDLVVIDKPHFLPTTPsGRYLRESALVRLRVRLDNPDLTPIHRLDRGTAGVVMFSARPATRGAYQSLFEKRQVTKVYEAVSARpsRWDQDAPALDVPLVYRNHieaRRGELRVVVDDSREpnSETTIEArgtgVSASGRAVLHTVLRPQSGRMHQLRVHLAALGAGILGDRRYPDllpDAPDDHSLPLQLLARELEFTDPLSGRARRF------
>UniRef50_Q9VKU8(215-393:547) RluA-2 n=6 Tax=Sophophora RepID=Q9VKU8_DROME   E=2e-43 s/c=0.99 id=33% cov=76%
------------PIKIVYMDKDIVVVNKPASIPVHPcGRYRHNTVVFILAKEHNLKNLRTIHRLDRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGRFP--DGIVECNEKIDVVSyKIGVCKVSPKGKDCKTTFKRIGEVGSD-SIVLCKPLTGRMHQIRVHLQFLGYPISNDPLY--------------------------------------
>UniRef50_B0EHA4(134-308:389) Ribosomal pseudouridine synthase, putative n=2 Tax=Entamoeba RepID=B0EHA4_ENTDI  E=3e-43 s/c=1.01 id=31% cov=79%
--------PVPCLLPIIHEDNDVIVVNKPSGIPTHSG-GRYTENTVINILEKERNiKLFGVHRLDRLTSGVLIIAKSSEIANEIQRHFI--SAHKKYICRVIGYM--GSCIVNKPIIETTCITKQRVTVGSEGKISTTIFEQIQYDQKtDTTLLWAIPKTGRMHQIRVHLSYENHPIANDSMYRNK-----------------------------------
>UniRef50_A8SBU6(1-218:231) Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBU6_9FIRM  E=3e-43 s/c=0.81 id=36% cov=87%
--------------MILYEDAALVVLDKPAGLSSeegVPAALRAHWNA---------PDAfvGVVHRLDTGVSGLMVYARTPAAAAALSRQvtqsqdayaVQDGRAEgkaaapqfvKQYRAIIAGAPDaqlPAAGVLRDYLFKDSRKGRVFPVSRPRKgvREAVLEYRILATAGEN-SLAEITLHTGRTHQIRVQFASRRHPLYGDGKYGSRQKGS----IALQSCGLRFVHPDTGKPMAFSLPLP-
>UniRef50_C3PKB5(122-345:353) Pseudouridine synthase n=7 Tax=Corynebacterium RepID=C3PKB5_CORA7   E=3e-43 s/c=0.79 id=31% cov=95%
--------PVPYDIPILFEDEHLLVVDKPPFMATMPrARHITETATVRLRRKTGNNELSPAHRLDRLTSGILVFTKDRSVRGAYQTLFAERRVTKTYEAI---APLADvsPGTVWRSRMEKTPGELQGRIV-EGEVNAITEvaavepidkapYESIHGSLPELAKYTLKPQTGKTHQLRLHMLQAGVPIIGDPIYPvifPAEAEDMRIPMHLTATHISFVDPLTARPREFFSQLPF
>UniRef50_A6DMG7(10-219:246) tRNA pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG7_9BACT  E=4e-43 s/c=0.84 id=30% cov=88%
----------------LYEDEYLVVAKKLAKISVHRSEMCRDRRTLLTmvRNKLGGQYVYAVHRLDRPVSGPLLFAKSPEMCRELQKQFNEKTVEKKYIALVRG-WLEGKGKVDKQLLKKSNGTI---------QDCLTRYRGLataeideplgKFPTVRYGLVELEPVTGRYHQLRRHMRDLAYPIIGDSTDGDSHQNRFfrekfeLRRLMLHCFYLSFKHPVSQELIKIYLEPD-
>UniRef50_C5DCE4(113-311:397) KLTH0B02376p n=2 Tax=Saccharomycetaceae RepID=C5DCE4_LACTC   E=6e-43 s/c=0.88 id=27% cov=79%
-------------MKVVHECEDLLVIDKPSGIPIHPT-GQYYQNTLVEVLKSHGKTVFPSHRLDKITSGVLILTKNPHMANKIQHQIRQRTMSKIYLARVDGAFpmadtlgsltpfesPDKTQTVDSAIYTVEL-KKQFPAAFSPPREAKTKFYPLKYYPKsDETLVACQPITGRTHQIRIHLARLGHPIVNDPFYNLKNSR--------------------------------
>UniRef50_A7K4M8(15-196:243) Pseudouridine synthase n=47 Tax=Gammaproteobacteria RepID=A7K4M8_VIBSE  E=6e-43 s/c=0.97 id=27% cov=82%
-------------FDILHTHPDFLIINKHPNVSVH----KDDGDTMLLQevaKQSGDEQLYLIHRLDKMTSGILFLGRNAKAASALSQAFADRQVEKFYLAIGSKKPKKKQGLVVGDMERSR--RSSWKLVNSKNNPAVTQFFSLAAEPGERLFL-CKPHTGKTHQIRVALKSVGSGIVGDPIYNAGNE---ADRGYLHAFSLCF-----------------
>UniRef50_UPI0001792C80(27-253:278) PREDICTED: similar to RNA pseudouridylate synthase domain containing 1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792C80  E=8e-43 s/c=0.77 id=30% cov=91%
---------NNINVEIVYKSNDFIIVNKPEDVFT--NNHNKARPSLDVLLRKKYPHLvnsnlehsfYFVHRLDFVTSGVLCIALNKRACAKASCAMQKRISRKYYIALVRGHVSQDHLDLTDSIGycaREAEGNRKMctidKVCCTGPRDAHTRLVVLERGvfmSYPATKVLLQLITGRRHQIRVHCSTIGHTIVGDYTYSGRKDISPS-RTFLHSYRLELgvdginvqtFDPFTKAKL--------
>UniRef50_C7RAZ2(74-301:305) Pseudouridine synthase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAZ2_KANKD  E=8e-43 s/c=0.77 id=30% cov=96%
------QEPTIPFAEmIIEHNEHFLIAYKPHFLPVMPGGVFVNE-CLQQRLidKTGNPNLQAVHRLDRDTAGLVMFSTNPHTRSDYHQLFAQQNIKKHYQAIAKtqaGEsLSGKSWHIKNYLARSEPQFIFQNLDTspddtsPHDKDAQYAESLIHCEDDNlqLGLFTLSPITGRTHQLRLHMMSLGFPILNDRFYPSlqpKQADNFSQPLQLLAHKLSFIDPVSKEPRAFTSPV--
>UniRef50_C8NY78(101-321:339) Pseudouridine synthase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NY78_9CORY  E=1e-42 s/c=0.79 id=33% cov=95%
-------EPRVPFeVTVVYEDDAIMVVNKPPFLATMP-RASHITESATVRLRRstGNEELTPAHRLDRMTSGLLLFTKKASVRGAYQQLFASRAVAKLYEAVADdiGPSLPARPSANSPLVWEHHIVKREgelasSITVDAIPNSLTYVTDITPLQGGAARYLLQPVTGRTHQLRVQMHAAGAPIHGDPVYPellPASAEDFTNPMLLTAVGLAFTDPLTGVKRTFSAP---
>UniRef50_P53294(119-304:404) Pseudouridylate synthase 6 n=8 Tax=Saccharomycetaceae RepID=PUS6_YEAST  E=3e-42 s/c=0.93 id=33% cov=75%
---------------IVFEDESILVIDKPSGIPVHPT-GQFYQNTITELLKLHGVDALPCYRLDKITSGLLILAKNSQSAGEIQKSIRSRDMIKIYLARVKGRFPHSELILDnenaaettfedtskvtvemTPIYSIDPKRQ-FPVGLSTSKDAITKFYPIRYFSHaDETVVACKPITGRTHQIRIHLARLGHPIVNDSVY--------------------------------------
>UniRef50_B5EI85(84-287:293) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B5EI85_GEOBB   E=3e-42 s/c=0.85 id=34% cov=90%
--------------EILFQNDELLVACKPHFLPVTPG-GEYLSQSLLHRLREstGIHDLVPLHRIDRETAGIVLFSANPKTRGRYGELFREGSIEKSYEAISAApvEPGQAEWLVENRLV---HGEPWFTMRTEQGPPnARSLIRLVEQ-RDGAARFQLTPVTGKTHQLRVHMSGLGLQILHDRLYPqlQPQQPDDFDRpLQLLARRVRFRDPLSGRLLEFES----
>UniRef50_UPI0001BCD7D0(54-267:283) hypothetical protein AmarD1_17996 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD7D0  E=3e-42 s/c=0.81 id=32% cov=91%
-------------LTVLHRDERLVVVDKPAFLSTIPrGRHVAQSVVVRLRDELGLPELSPVHRLDRVTSGVLVLTTERRWRGAYQGMFQHRRVHKAYRAL-----APLRPDLELPLTVRNHLRKdrgaWQVTVDPDAQPnAETLVE-LDAVVGGLGVYRLTPRTGRTHQLRAHLCGLGIPIVGDPLYPAvleVDVDDFSTPLQLLAHEVSFTDPVDGGERRFTSRRD-
>UniRef50_A1KNV2(80-285:305) Pseudouridine synthase n=13 Tax=Mycobacterium tuberculosis complex RepID=A1KNV2_MYCBP  E=4e-42 s/c=0.84 id=32% cov=92%
--------PVPFDVPVLHQDADIVVVDKPHFLATMPrGRHVAQTALVRLRRELGLPELSPAHRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLA--RAPVAPGLALPRLVRSRIVKRRGHLQAVCEPGVPnAETLVERIARDG----LYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNvisVAAHDFSTPLQLLAQRIEFDDPLTGSHREFAS----
>UniRef50_B8J0V1(122-306:360) Pseudouridine synthase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0V1_DESDA  E=4e-42 s/c=0.94 id=34% cov=81%
---------------------YLWAFDKPAGLPVHPGTG--HEDSLTTRLSCHFAGvsfmPTPVHRLDRGTSGIILVAASYAALDETQRALRANAMHKEYVAWVAGRWPHTQTcLVRHFLRKEAVDGFERvrpvKADAPDAKEALCLVRALS-IADRASLVQVRLLTGRTHQIRVQLSSLGHPVLGDTKYGQTRAGVA---LYLHSLRVILP----------------
>UniRef50_C4FZD3(116-320:353) Pseudouridine synthase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZD3_ABIDE  E=4e-42 s/c=0.84 id=29% cov=84%
--------------KVIYEDRDIIIVNKPVNVLSQ---IAKTGDVSMNEWLISYLinsgsltaedmltvKPAVVNRLDRNTSGIILAGKTLTGLRFLSDIIKTRKLTKYYLTIVKGEI-PNNFTAEAYLLKNDNHNTVKiyKDKVEGAEYIKTAYEVLQV-KDGHSLLKVELITGKSHQIRAHLSFLGYPVIGDGKYGLKSENTNYRRmglntQFLHSYEIKFP----------------
>UniRef50_C7H0C0(80-273:322) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0C0_9FIRM  E=4e-42 s/c=0.89 id=34% cov=78%
----------KPSFKIIFEDDNLLVVYKRAGLLTH-GSSTEKKRTLLNEVKTYLIQkgeydpgfektfsLATSNRLDRNTEGLIAIAKNAASQRELNAAFKEGRIERYYVAEVVGEVR-GDVTIDYPLYKSAKNNTVFAdkdgsVPPDVTKEAITKVHPIRVNRidkngseFTYTVVRVKLLTGRTHQIRVHLAAIGHPLVNDRKY--------------------------------------
>UniRef50_C0W298(125-357:358) Pseudouridine synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W298_9ACTO  E=5e-42 s/c=0.74 id=26% cov=93%
---------EHIHIPIVHRGNGWLVINKPKDIASTPrGSYIVRTATIALRRQEGNADLTPAHRLDRATSGLLLFTERPELRGMYQDLFQNRQVTKTYRatakaidfnyikssALVKITVDPEEQpgwvKIESRIEKRPGDPGAQ---HAFGKiNAVTYLRPVKTvtiEGQQFVEYEVQPQTGKTHQIRLHFASLGAPLVGDPLYGGFNAapfgleKVPAGYQELHleACRLEFKDPQTQEMVKIE-----
>UniRef50_A7ZGA9(72-276:307) Pseudouridine synthase n=4 Tax=Campylobacter RepID=A7ZGA9_CAMC1   E=5e-42 s/c=0.84 id=38% cov=84%
----------------IFECESFAVFDKPSGVLSHPnGRHCEYSlnDEIYTLFGRD---ASVAHRLDCETSGVIVVGKDRNSTIKLKKIFENREVFKSYVAMVQGKI-EREFTIDAkmDLANNYDDVKMRMQICENGKSAVTKILPIKYFDDiDTTLVRAIPLTGRQHQIRLHLFHVKHKILGEPLYGLSRPQiekildkemsererinlTDAKRLLLHSDEISF-----------------
>UniRef50_A4S7H5(47-309:318) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7H5_OSTLU   E=6e-42 s/c=0.65 id=36% cov=90%
----------------VYVDDDVYVLNKPAQTYVHdierlveRGMVKCDDATTVDNRAttRDVPfnaseSARVVHRLDRDTSGCLVVARNRDAIRSLSAQFADGTVQKTYVALCAatadydgvedhrrvftGWGRAKYGLFRLYdaadIGRALPGNKKVKV-----KHAETTIiveRVItdgvalrfcepptaddaDRRRHRVALARCSPLTGRTHQIRLHCASLGLPLVGDVRYGGPiaatrdgpiDAPFSARRVAgalLHAERVAFRHPKSNLRVDVHAPRP-
>UniRef50_UPI000185C0B7(97-322:342) 23S RNA-specific pseudouridylate synthase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C0B7  E=6e-42 s/c=0.76 id=33% cov=93%
------------PMPIVFQDDNLVVVDKPSFLATMP-RGRHITETAVVRLRRELGNPELVpaHRLDRLTSGLLIFTARREVRGAYQGLFASGEVTKRYHALTSPTPiagGASEALPETPLelrTRQHKIAGQMQAYTLEGEPnAHTiieHISLVDVPSDadglaadsgRVALWQLKPITGRTHQLRLHLSELGFPILGDQYYPeilPLEAENTSEPLHLVCVEMSFADPVTGEQRTFHS----
>UniRef50_UPI000197A463(59-294:310) hypothetical protein HcinC1_08895 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197A463  E=8e-42 s/c=0.73 id=31% cov=97%
--LSEFVPSSIPHLaDIepLFYNDDFAIYDKPHNLLTHPkGRFFHY--SLNDILKSRFGiQANALHRLDKQTGGLVLCSINPKSKKALESLMQSRSIAKSYCAIVEGRV-KAEILINEPIMtqKHKGDLAIKSIVSEKGKESRTLIRPLAYYKDST-LIHALALTGRTHQIRLHCSYIGHRILGDPLYGVSEDKSRfyleapnlspkehkalfdAPFLCLNAYALRFS--FQGSDYHFKSNAPF
>UniRef50_A6VWM4(2-207:223) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VWM4_MARMS   E=1e-41 s/c=0.83 id=32% cov=89%
-------------LQILFRSVDYWIVEKPAGMSFH---AESEGLGVMQTLAISYPDQnfYPVHRLDKMTSGLLIVACHAAAAAEFGKMFERHEMEKRYLALSAKKPKKKQGTISGGMA--PSRRGQWKLTQDNENFAVTQFFSSAFHGLRV--FIVRPLTGKTHQIRVALKSLGSPILGDLRYSGE----GADRGYLHAYSLQFNwrgemksylsLPISGE--HFSSElSDF
>UniRef50_A8JB96(90-303:303) Pseudouridine synthase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JB96_CHLRE  E=1e-41 s/c=0.80 id=31% cov=88%
-------PPSPCHVDVVYEDADMVALSKPSGLQVLPAAMFHQRTVLSLLRRRQYLDvPAPVHRLGRGTSGCgaaalaalissa------PASGSGCQLPLR-----KFYRALVQGRVKADQGRVDVPIgpIPHPGVDRGLFAATPDGKPAASVWRAGCMEAECT-LMEVEILTGRPHQIRIHMAAMGHPLVGDPLYGAGGRPKVRYRLygsdcgyYLHSLELHLPHPITGQPL--------
>UniRef50_UPI0001C37945(81-310:315) pseudouridine synthase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37945  E=1e-41 s/c=0.74 id=29% cov=94%
-------------LDTVYEDENVIIVNKPLGLDSH-SNGEHNDDTLINRIKLYLYNkneyqpdeessfaPALCSRLDRNTSGLVTAVKNAAALREINSAIRDGMVHKIYLCITIAQPPKSADIITAYHKKEDSRNIVRISDHplDGYKPIKTGYEVLK-SHKGLSLVKVTLFTGRTHQIRAHLSHVGAPLLGDGKYGDTSVNKRYGvfYQALCAYGLEFALsedsPlAYLNKLDIHAPePDF
>UniRef50_A6DFD4(6-188:231) Pseudouridine synthase n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFD4_9BACT  E=1e-41 s/c=0.93 id=31% cov=84%
--------------EVIEEFEDFILVNKKPGENFHSESGEE---GLFHQLKEHYGELYPVHRLDKVTSGLLLMARNLQSCQELNQLFEAQKIEKFYLAISDRKPKKKQGWVIGDMEKSR--RGGWKLCESRKNPAVTQFF--SYSIGQGKRVyLLRPRTGKTHQLRVAMKAIGAPICGDPNYYPGLIKGHEERCYLHAYVIRFT----------------
>UniRef50_Q54VB9(190-619:746) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54VB9_DICDI  E=2e-41 s/c=0.40 id=30% cov=96%
----------DIKLDIVYEDKDLAIINKPAGMLVHPTALtlgsnalvinkEDQTHTLVNALIHRYGgvenlssvggveRPGIVHRLDKDTAGMIIIARNNDVHQKLQTLFEKHtstmithttidqyedngsisnnqiermlqgkkiplTISKKYHCIVLGKPKEQHGFINKKISRHPADKNKMVIDQDNGKEALTEFKVLKVwenvnakvldnqknkqtskqqtttnnnnnnntttnniinstlseydnamnqlhknkkkntkksnitsknvnsrmqflsvddddeeekedgdedekededeeenedeedeeeeddeeedeeeeeeddddedeeeeeddeeeedeeenydeiilrlqqktkmiTSNTFSLLEVTLHTGRSHQIRVHMASENIPIVGDPIYSSKSKQFLVSYLLLASMNLKFVHPILNEIKEFSIqyPSHF
>UniRef50_A4S2M8(28-208:218) Predicted protein n=2 Tax=Ostreococcus RepID=A4S2M8_OSTLU   E=3e-41 s/c=0.94 id=37% cov=71%
------------------------------------------------------------HQLDTATSGVVLTAHTREAAGNAAKLFRDRLAKKKYLAVVFGWPKEDEWTVNAKLGKDPTDVKgfRERVDEENGKASETSFKVLQRGyctldganrGVEVSRLECRPVTGRRHQIRLHLMHSGHPILGDMAYSDDTD---SYRMFLHA--LELVMPFEEETLTFatEPPESF
>UniRef50_B8CVD5(16-194:237) Pseudouridine synthase n=15 Tax=Shewanella RepID=B8CVD5_SHEPW   E=3e-41 s/c=0.95 id=31% cov=82%
--------------QIIADEADFIVICKSANIHFH---SQDGSAGVVAQAELDLGiKLYSVHRLDTMTSGLLILAKSSAVAAEFTRQFSEHKVQKYYLALAKGKPKKKQGWVIGDMAKSR--RSMHKLLRSMDNPAKTQFFS-HSVGDGLRLYLLKPLSGKTHQLRVALASIGVPILGDELYGGDA----SDRGYLHAYSLNF-----------------
>UniRef50_C1E9U3(212-530:545) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E9U3_9CHLO   E=3e-41 s/c=0.53 id=36% cov=94%
------------PLDVIHEDDDVLVVNKPPGLRFHPVHRFE-GNSLLSRAIGHVRRsgrdddrldgdaagdghahvPHVVHRLDMDTSGVCVLVKRPELVDGFARQFRgdagERRAVKEYLAIgvgaappgVTGcvvkadwKPPEASGneqttaaefigvefTVDAHVGPHASIPEARAVhrppptperipkrngsggDPDAPKPARTDVRIVSSSrvpidvnddgdvmqSLTAVLARVRLHTGRTHQIRVHMAHADLPILSDPLYGPHirwdgaspcadastsailppgvdadvwGGPRWLGRQALHAARLTLRHPETNEEMTFEarAPED-
>UniRef50_D1N1K3(82-316:321) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K3_9BACT  E=4e-41 s/c=0.72 id=30% cov=93%
-------PEADLDYRIAYEDDALLVVDKPGNLCVHPS-GPFFKHTLWHLLSSKYGKIHLVNRLDRETSGLLVAAKNPKAAAKLGKP--GWPMRKEYLALVFGNFAD---RIEAYgfLVPDLASVVRKKRRFVAGERppegavrpesART---VLlpARSGERYSLVRALPETGRLHQIRATLFSLGFPLLGDKLYGpddgiflkirsnaitaADRERLILLRQALHSAKLAFRHPDTGETVAVESplPPDF
>UniRef50_A5DIJ4(87-280:390) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DIJ4_PICGU  E=4e-41 s/c=0.88 id=31% cov=85%
----NYKHIHEPpivwsgPISIIYQDPSLIVVNKPSGIPTHPsGNFRYNSVTEIVKAQLHLESIFPCHRLDKATSGILMLATTSAACSNIQKQLQERKdVKKEYIARVKGKFPPSQLVHQDPVFLLNSTAGYIMPGRYVSIDSSTTFTRLKYNSElDESIVSCEPHSGKMHQIRIHLRNLGFPIVNDKLYNPGESDKL------------------------------
>UniRef50_Q3IGX9(8-187:226) Pseudouridine synthase n=4 Tax=Alteromonadales RepID=Q3IGX9_PSEHT   E=5e-41 s/c=0.94 id=31% cov=83%
------------YLKVVHSHSDFYILAKPAGLNFH---SEDAAGFVVLAEQQLNEKLFAVHRLDKVTSGLLILARNKLAAAKFTQMFTEHTINKFYLAISDAKPKKKQGWIKGDMAKSR--RGTFKLLTTTANPAISRFYSVSYKPGFRGYI-LKPYSGKTHQLRVALKSIGAPILGDTSYAG----AHSARTYLHAFALDF-----------------
>UniRef50_Q54UF9(231-433:578) Pseudouridine synthase family protein n=1 Tax=Dictyostelium discoideum RepID=Q54UF9_DICDI  E=5e-41 s/c=0.83 id=32% cov=80%
-------PPVTGEsIKIVSLDENVVVVDKPSSIPVHPcGRFRHNSLMYILASEHGINQLYGVHRLDRLTSGLLLLARTPDSANKKANQIQSGLVSKQYLAKVIGkfpgsdtinsssssfneqiklckHLEDGTFIIDQPIVIQSMRLGINHVGV-GGKPSITHIKLFSYdQSTNTSIVLCTPKTGRTHQIRVHLKWLGFPIANDPLYNN------------------------------------
>UniRef50_C3XV24(72-318:335) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XV24_BRAFL  E=5e-41 s/c=0.68 id=33% cov=93%
----------------LYDEGDIVAIEKPYGVPVHggPGMGVSIADSLpLLQQALKTDRLYLVHRLDKETTGVMLLAKTDDMARQLHSLFRLRKVIKKYWVLTMGVPSHEEGVVDIPIKelevtaqGRPHHRMvcvpeyseetklivKKKRKSSDAQIAITNFRVLD-SCGSCALVECQPETGVKHQIRSHLSYgLGCPILGDHKYshhsklapqrlptgmlerfGIQQPKARYLPMHLHARQIVLPGFRDGRSLYFTARlPDF
>UniRef50_A4S8Z7(9-310:321) Predicted protein n=2 Tax=Ostreococcus RepID=A4S8Z7_OSTLU   E=7e-41 s/c=0.56 id=36% cov=92%
---------------VLHADEHVTVVDKPPGLATTRGNGV---DVSVYDLRHALDSEYVVHRLDRDTSGVLVLARTAFAANRLNAMFAKKSrmdfteimradmergdapslsndpVVKTYWALTSNPPPRGarSGWIEAPLTEVGDGDGYSTARLVGGwrvydakgggvvvgtgesmrdksndagspasKAAMTHFKVLASAGeDGPTLLELTPITGRKHQLRVHLAkALSSPIIGDYKYGFNDRRAPWKsrftdiesadvesekesdfwrklrraslrgvskiPLHLHARALQFVHPESGVSTRVVAepPPHF
>UniRef50_UPI00006CD8DD(93-281:446) pseudouridine synthase, RluD subfamily protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8DD  E=8e-41 s/c=0.89 id=30% cov=79%
-------EPPIINLlpKVIFEDDKLLVLSKPPYISVH-ASGGFHFNSLVGLLKfemGYNIELYVLHRLDKLTSGVLIMAKD----RDLTKKFHESEtelIKKTYLARVHGNFNHQYLEYEKPIYCIYKKVGTYAVLDttdeeeiksKGAKQSKTIFKKIWYdEKSDSSLLECQPITGRTHQIRVHLSSLGFPIINDTQYGG------------------------------------
>UniRef50_C8X2D1(5-196:237) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2D1_DESRD  E=1e-40 s/c=0.88 id=26% cov=87%
------------------EDERFLCIHKDPGVDCH---TDNGSSGVIRAVQSAYRiRLFPLHRLDKVTSGLLLLAKDRETARSMGELFSAHRIDKFYLALSAKRPRKKQGTVIGDMRRSR--RGTWRLERSRENPAVTQFVSRAWSGGKRAFL-LRPQSGKTHQLRVALKSLGAPILGDPLYGPR--NHSQDRCYLHAMAVSFE--LDGERYSFWTPP--
>UniRef50_C4LE96(108-310:316) Pseudouridine synthase n=23 Tax=Gammaproteobacteria RepID=C4LE96_TOLAT  E=1e-40 s/c=0.83 id=34% cov=85%
--------------SILYMDEHLLIADKPHFLPVTPA-GDYVSQTLLARLvaRLNNFELQPLHRIDRHTAGLVMFSVQKKSRAAYQALFRDRKIEKRYEAI-----APALPQIAFPHIR--------ATRIERGEPfflsqetagtanSQTIIDVIERRAD-LWKYALNPVTGKKHQLRLHMSALGAPIYNDAFYpsvNDDVADDYQKPLQLLASELTFVDPVSGVKRHFKS----
>UniRef50_D2Q929(36-257:264) Ribosomal large subunit pseudouridine synthase D n=19 Tax=Bifidobacterium RepID=D2Q929_9BIFI  E=2e-40 s/c=0.75 id=33% cov=92%
--------------EVLYEDDGIIVIDKPHFLATTP-RGMWYRETALIRLRERYGEPDIVpaHRLDRLTAGVVVFVRKPELRGAYQMLFQEHRTVKTYecLAPLAPVVRPRYGTVTridrnqpFPLVRRSHIAKDRGRLQAYEIPAAVNAESLIERGDNpriidgnvVINYVLHPKTGKTHQLRVHMNSLGLPILGDVFYPDviqRPYDDFSRPLELVARRLEFDDPVTGESRAFVS----
>UniRef50_A7RMP5(79-265:418) Predicted protein (Fragment) n=2 Tax=Metazoa RepID=A7RMP5_NEMVE   E=2e-40 s/c=0.89 id=31% cov=80%
-------PPVtDQPLEIICNTDDIVVLNKPSSIPVHPcGRYRHNTVVFLLGKEHNLRNLYTIHRIDRLTSGILMFAKTLTRARMLEAQVRDRQVEKEYLCRVQGEFPSEPVDCEQPIIVVSHKVGICRV-SPDGKSCRTVFTKL-HSNGKSSVVKCIPYTGRMHQIRVHLQWLGYPIIDDPIYNHP-----------------------------------
>UniRef50_C7LP84(16-202:232) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP84_DESBD  E=3e-40 s/c=0.89 id=35% cov=85%
----------------------FVVVHKDPGLDFHdcDGRMG-LCSLVRDRLQA---RVFPVHRLDKATSGLLLLARSREWAAALAGLFRERAVQKYYIALSDLTPGKKQGLVQGDMVRSR--RGSWKLARSMERPARTRF-LSWSVRPGMRLFVLKPMSGRTHQLRVAMKSLGAPILGDSLY-HPIVPDWPDRMYLHAHTLRFS--LGGQNFAYACPP--
>UniRef50_Q1MQF8(110-298:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q1MQF8_LAWIP   E=3e-40 s/c=0.88 id=27% cov=80%
----------------------FIIFYKPAGLAVHGGTG--QTDSLAHRLSQHYAHstfmPTPVHRLDKDTSGLLLVAKTYNSLRYFSELFASHstQLTKEYLAWVVGICPWTQPICLEDILtkkqkqdnYSRLNSYQNKLQQTSAQKASLTVRCIKQYKDK-SLLLIKLHTGRTHQIRIQLSIHGFPIIGDKKYGNTIRSHNLK---LHAFRLSFP----------------
>UniRef50_Q6A5E7(71-287:295) Pseudouridine synthase n=4 Tax=Actinomycetales RepID=Q6A5E7_PROAC   E=5e-40 s/c=0.76 id=34% cov=90%
---------------ILYSDERILVVDKPHFLSSIPrGRHVLESVVVRLRTQLGLPELTVAHRLDRVTAGVLLLTRERKWRRPYQEIFERREVVKKYrlVAPVvhdpagEGVTATKSGWqVRSRIIKERGILQAREVP---GVPnAVTDIALIGEHG-GWGLYEASPRTGRTHQIRLHMQRLGAPIVNDPFYPvvlDTPVDDFTHPLQLQAWRMGFTDPVTGDPRAFTS----
>UniRef50_Q73KM2(7-212:236) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73KM2_TREDE  E=5e-40 s/c=0.81 id=29% cov=86%
---------------ILFEDNFFAVVLK---------NCGDNSQVFFKKAFSEKKYAEAVNRLDKPVSGLVLIAFSPAMHTKLNNLFKEKKIKKEYWAICK-KIEELKSAADSKISDTTPVLYKKEFCenylefntkiqkafvtesRQRGKKA-SLYWQLAGIGDNYNFLRIFPETGRTHQIRIQLSHLGMPIKGDIKYGFARTEK-SGGIRLHAQSLKFEHPESKKRIEISA----
>UniRef50_O16686(141-316:432) Uncharacterized protein K07E8.7 n=2 Tax=Chromadorea RepID=YK27_CAEEL  E=6e-40 s/c=0.94 id=29% cov=79%
------HPIRDLPIRVISETDDLFVVEKPPSLPVHTcGQYAIHTVLGQLRVNEGRTGLRVLHRLDRATSGVLLFAKNYETDLEFKTTLKQGEWSKEYICKVDGVFPDEEQVCEQPIGPLVISMGIQCV-RPDGKDAKSRFRKLWSDGTQ-SVVQVHIETGRTHQIRVHSQFLGHPIAGDQIY--------------------------------------
>UniRef50_B1C9B9(81-274:307) Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9B9_9FIRM  E=8e-40 s/c=0.85 id=28% cov=84%
-------------LNIIYEDKNIILIDKPSGILSQ-ADGSSKEDIVSNLISYLNSKStGIVTRLDLNTSGIVLAGKNRRALMLLNEMSKNKLIDKRYLTLVRGDFD-REGKVTHYGIKDNKENKlilgNKKVDGSFEVSAE---FIIKKRYKYHTLLEVRLITGKTHQIRSQLDKMGFPVVGDRKYNkskqcGNKDDFKINRQFLHCYKLTL-----------------
>UniRef50_C5BI24(4-199:231) Pseudouridine synthase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI24_TERTT  E=8e-40 s/c=0.84 id=29% cov=89%
--------------SIVDEQPGFLLIHKYPGAVVH-GTADSGEITLTQSLRHDFscKSLFPCHRLDRTTSGLLVVAKGEAANKYFSTLFEKRAIDKCYLALSAKKPAKKQGAVRGDMVK--ARNGSWMLTRSLNAPAHTQFFS-KGGVEGKRLFVLRPITGKTHQLRVAMKSLGAPILGDERYGGGD----ADRCYLHAFALQFS--VDGNEYSYVCPPE-
>UniRef50_UPI00016C3B11(1-189:204) ribosomal large subunit pseudouridine synthase D n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3B11  E=8e-40 s/c=0.87 id=34% cov=73%
--------------------------------------------------------LGVVHRLDKPVSGSLVFARTSKAAARLSEQFREGGVEKVYWAVIEAqapgpWVTADNGSLEDWLQKDDDNARVETVAPETpgAQFARLLFQV-RGRHNGLIWLELRPHTGRKHQLRVQLASRGASIYGDHKYGSK--LPFGNGIALHARSLTFLHPTSKNPVTVKSEVP-
>UniRef50_Q55AQ0(15-290:316) Pseudouridine synthase family protein n=1 Tax=Dictyostelium discoideum RepID=Q55AQ0_DICDI  E=1e-39 s/c=0.60 id=36% cov=89%
-------PPTDPKYETIYLDKEYIVVNKP-FDVNIDDETGERLTTVVKYIETEYPEhfgnVRFVNRIDYATSGLVVVSFNKKSTTVAMELFQSRETSKTYLAIVHGHMEFDESIIDKPIQYDTSDENSFKMCVVEdinnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnqstttttitttttiknksnpAKASQTSYKVLERGYLKinndeyipITKVMLFPKTGRRHQLRVHLLSIGHVIVGDETYGPKDS--TIHRMMLHSWKLIlpFKH---------------
>UniRef50_Q6F9V8(95-298:304) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V8_ACIAD   E=1e-39 s/c=0.81 id=28% cov=89%
--------------SILFENHDLLVVDKPHFLTISPtGKYVQETLLVRLKQQTGNEDLTPIHRLDRETAGVVLFCKRPESRGIYQTLFAKREVHKIYHAIAAYNP-----LITFPqtlrLCLEKGNPFYTMQVNPNGQvNSETRIECLAH-NQQWAKYRLSPSTGKQHQLRLHLSFLNIPIKNDPFYPvveHKADDDFSAPLQLLAKELSFFDPITQSPLNFKS----
>UniRef50_C3WHA9(84-273:295) Pseudouridine synthase n=4 Tax=Fusobacterium RepID=C3WHA9_9FUSO   E=1e-39 s/c=0.87 id=25% cov=86%
---------EELKSMIAYENENLFIINKNLGDVIHKGSG--HDISLLEEFRSYYSNNKInfVNRIDKLTSGLVIGAKNIKTAREIAKEIQLGNILKKYYILVYGKIEKEEFILENYLKKDEEKVIVSDVEKEDYKKSITHYKRI-NGDNDYTLLEAELKTGRTHQLRAQLNHLGHTIVGDTKYGKNIKEDI---MYLFSYYLKID----------------
>UniRef50_UPI0001BC98D7(106-318:324) RNA pseudouridine synthase family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC98D7  E=1e-39 s/c=0.77 id=30% cov=92%
--------PNETPIpvleTILYADEHLVVADKPHFLPVTPAGEYVEQTLLRRLIHRlGNPDLVPLHRIDRHTAGLVLFSANRQTRSAYQALFPTRQIDKFYEAI-----APALPGLEFPRLHESRlveGEPFFRMQEGAGASNtRTQIEVLER-QDQLWRYGLYPVTGKKHQLRVHMAALGAGICNDPFYPDvvkNPVDDYQNPLKLLAKGLRFIDPLNGKQRQFES----
>UniRef50_Q57Z98(599-815:828) Putative uncharacterized protein n=3 Tax=Trypanosoma RepID=Q57Z98_9TRYP  E=2e-39 s/c=0.76 id=29% cov=90%
-----------PIFPVVYEDDDLLVINKPPHVATSRHALscsqlcdDKATDIVSLQLtckkrgdvMRRVFRQGQVHRLDTETSGCLIMAKSDVAASSLRHQMgtsaAYSQSSKIYLALCA---VVESNLTNIPLNGVLRDPADAKIT--------TKYRIVHfYKRFRVALVEARIQQGKKHQIRRHLAAVGLPILQDVEHGGAACCSpLLQRVALHASSVTVVHPRTAEVLTCVAPLP-
>UniRef50_Q2SKD2(2-189:231) Pseudouridylate synthases, 23S RNA-specific n=3 Tax=Proteobacteria RepID=Q2SKD2_HAHCH  E=2e-39 s/c=0.87 id=31% cov=82%
-----------PPFQIVsdY--DDLLVVDKAPGISFHdeegqPGLCSCVADTLGIRV-------YPVHRLDKVTSGLLLLPKTPALARELTEQFSLRQVEKYYLALSAHKPQKKQGKIIGDMEKARAGAWKLTAGREN--PAVTQFFS-HSLQPGVRAFMVRPLTGKTHQIRVALKSVSAPIAGDSLYGG-RANKEFDRTYLHAYGVRFN----------------
>UniRef50_B0ME87(83-312:329) Pseudouridine synthase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0ME87_9FIRM  E=2e-39 s/c=0.71 id=24% cov=93%
-------------LSVIYQDSNVLIINKPYGMLSQkakPSDISVNELIVPYCLEHgilkesdlELVRPSVCNRLDRNTTGLLIAGISLEGLQTMAEVLRDRSVRKYYYCIVKGMVNKKT-RISGYICKDHRENKVsfSERKISGGSRIETAYEPMA-AGHGFTLLRVELITGKTHQIRAHLAGMGFPLAGDTKYGDRgvnlqmKQKFGVKHQLLHCGCLEF--PegmkrcgeLSGRTVAAEPPETF
>UniRef50_C3XCW5(84-305:319) Pseudouridine synthase n=2 Tax=Oxalobacter formigenes RepID=C3XCW5_OXAFO  E=2e-39 s/c=0.74 id=28% cov=93%
-----YLPNERPNPfqeTVLYQDDWLVVADKPHFLPVTPS-GKYVSETLLVRLRKKLGidTLTPIHRIDRETAGLVLFSVKPEGRNLYQRLFRENFVSKHYEAI-----APYRDDIAFPMryrsrIEEGDSFMRMRVIPDGTPNAETEIS-IQQKSNAFAHYHLKPVTGRKHQLRIQMCSLGIPLLNDRIYPVHlpeavtdemQAEEFRYPLQLVAKSVSFKDPVSEKIHHFES----
>UniRef50_A6T3V4(96-310:316) RNA pseudouridylate synthase family protein n=11 Tax=Proteobacteria RepID=A6T3V4_JANMA  E=3e-39 s/c=0.76 id=31% cov=92%
--------PDEPRIPfdevVLYQDDYLVAVDKPHFLPVTPA-GRYLQETLLVRLKRslDIDTLAPMHRIDRETAGLVLFTIQPQTRNLYQTLFRERSVSKEYEAI-----APLRADLELPTTYRSRlleSEAFMKMCEVAGEaNSETAISLLETRG-NFGRYLLQPVSGQKHQLRAHMAALGIPIVNDRIYPHlypdeGATQDYSQPLQLLAKSISFTDPLSGKLHRFDS----
>UniRef50_A1KTA8(87-303:307) Pseudouridine synthase n=24 Tax=Neisseria RepID=A1KTA8_NEIMF   E=3e-39 s/c=0.75 id=30% cov=92%
------DEPRIPFEEkILHIDEHLIVVDKPHFLPVIPsGRFLRETLLTRLRLRPELQHLNveditPLHRLDKDTAGVMLLSHNPATRGAYQTMFQNKTVWKTYEAL-------ALTRTDLPYPLDVVSRLVRGEKFFTTQEvegvpnAHTTVELIENRGE-FSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPvlsEAGSEDYRKPLKLLAKKIAFADPLSGRERVFCS----
>UniRef50_Q6CG33(105-311:337) YALI0B01276p n=1 Tax=Yarrowia lipolytica RepID=Q6CG33_YARLI   E=4e-39 s/c=0.79 id=34% cov=76%
---------DEKPIRIVFENDALVVVDKPGGIPVHPtGKYLFNSVKEILKHETGLEELYPAHRLDKNTTGVLVFAKTSESVNHVTQQIMSRSAKKEYLARVKGRFPPGRVETHHPVVENTIKRNVQ------PKDAHTAFERVAYDEHRdLSIVRCLPSTGRNHQIRQHLLHLGYPIENDREY--------------------------------------
>UniRef50_A8L7E9(13-239:285) Pseudouridine synthase n=1 Tax=Frankia sp. EAN1pec RepID=A8L7E9_FRASN  E=5e-39 s/c=0.72 id=32% cov=82%
----------------IFEDEAVLALDKPVGVSVM---GERHDTDLVSMARDAGEELFPAHRIDKVTSGVVLFAKELRFHGDLTRQFNRRTVEKTYLALTRTRGLPALATIDLPLSVGRKNRVRIAANRADivawpgpagtptpdgpagtpgsdgpagsgarspaswtvpaartfpnvrSYPSVTRIARVWEGAEHT-LVAAYPISGRRHQIRVHLAWVGHPIEGDPLF----DRAPVTRTFLHSWRLSFD----------------
>UniRef50_C7R188(124-344:362) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C7R188_JONDD   E=8e-39 s/c=0.73 id=28% cov=94%
-------EPEVPFAcDVLFEDDDLYVIDKPHFLASTPkGRYVTETALVRLRKDTGNPELSPAHRLDRLTAGVLVFTKRRELRGAYQELFAQRQVTKVYQAVaptnpavdlpatVRSRIVKEHGIMRAHTMPGEPNTETLVTLTDTATLPAGH----DVAVQDVGLYTLYPHTGKTHQLRIHMASLGLGIVYDNYYPDfyhVESDDYRHPLQLLSSQLAFTDPLSGVQRDFRS----
>UniRef50_D1VRZ3(85-279:316) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VRZ3_9FIRM  E=8e-39 s/c=0.83 id=26% cov=84%
--------------QILYEDDNICLMKKPLNMLTHNDK-NFYQDNMVDRFidylifkeeysprEENTFRPSICNRLDRNTSGILLGAKNAETLREINKAIKERLVDKFYLTIVKGKVQKP-FEINIKLEKTDKNIMRK---SSQGKDSLTKFFPL-ISNGEYSLLKVKLITGRTHQIRASLKEKGLYILGDRKYGTGKDKEFNS-QALHNYLIKFN----------------
>UniRef50_D0WNY8(93-298:306) RNA pseudouridylate synthase family protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNY8_9ACTO  E=9e-39 s/c=0.79 id=33% cov=90%
------DEPDAPlELDVV--DgtDRWIAVDKPAGMATMPrGKHVAQTVTIAARRHFSNPEIVAAHRLDAATRGVLLLTLAKRWRAPYQMLFERREVRKAYLAV---APADDRFveaqTVALALAK-PRGSLKALVV--DGQPnAVTTVR-LADERRGLGLYEIEPKTGRTHQIRVTMSHLGIPIVGDWLY--PEVRDGGD-LQLLAARLEFVDPANGLEVALKS----
>UniRef50_C5K6J4(111-345:393) Ribosomal pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6J4_9ALVE  E=1e-38 s/c=0.69 id=30% cov=82%
----NENPvPFDGELKIVGETDDVVAVDKPSGMPVHSGGGHR-VNCLSAILKEQDPSrfslaIHTLHRLDRLTSGIVILGKNPDVARAFSEAFKKHdqEIQKCYLARVKGKFEGSNVVVEGFMRCVDFRVGKFILVKSNkgtasedanqgdaptstpsgddksaveeehieDKWSQTSFDKVWYDEQNdETIIKCYPKTGRTHQIRVHLESIGHPIANDSCYGG------------------------------------
>UniRef50_B6WPU4(101-303:335) Pseudouridine synthase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPU4_9DELT  E=2e-38 s/c=0.79 id=37% cov=82%
-------PPAPRPLQ---KDGDLWVFCKPAGLPTHPGTG--HEDSLSSRLAAGAGdapfKPTPVHRLDKDTSGILLVAASFAVLREMTTALRERRMKKEYLAWVEGLW-PHSGV---RLFRHWlrkeagtGNGREQMHVRQTGAP---------DKGETEALLLVRPVrvedrrslllvrllTGRTHQIRAQLSSLGHPIEGDVKYGA-RGRASGTPMYLHAMRVILPD---------------
>UniRef50_B0ENH6(95-338:378) Ribosomal pseudouridine synthase, putative n=4 Tax=Entamoeba RepID=B0ENH6_ENTDI  E=2e-38 s/c=0.66 id=31% cov=89%
-------PPVPIkEIKIIENTPEFLVINKPSGIPVHPtGRYNQNCILNILLNEHHFSHLKPVYRLDKNTSGVLLFAKTKKFASSFQSFLKEKssvfsspsSLQKIYLARVVGYF-PDFIEVNLPLHLIRFGTESQNSICEDGVEAKSSFKRLFFDKDsNTSVIECIPHTGRTHQLRLHLKAINHPIANDsayllnqihnyrqqdgdfirenkwrEKYGwvfdkdcndcnFPKGDPIEDQIWLHAWKYSFN----------------
>UniRef50_UPI000180B18D(177-356:456) PREDICTED: similar to RNA pseudouridylate synthase domain containing 2 n=1 Tax=Ciona intestinalis RepID=UPI000180B18D  E=3e-38 s/c=0.89 id=32% cov=80%
-------PVLDTKVEII-EDNSkYVVVNKPSSIPIHPcGRFRNNSLVYILAKDLGYQGLLGCHRIDRLTSGIVIFGKTKNIAHKVAKEISERKVEKQYVCKVVGEFPSTDIVCNEPVSlfnRKLGYAVAWKVEGVVGKEASTWFTRMSYDGTN-SVVLCKPKTGRTHQIRVHLQYLGFPIINDPIYNHP-----------------------------------
>UniRef50_B9L6B7(60-238:253) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L6B7_NAUPA  E=3e-38 s/c=0.89 id=29% cov=81%
----------------IFEDKNLLAVDKPPYITS-------------EEIAKNFGY-ELLHRLDKETSGVLILVKNDEFKKKAIEEFKKQNVYKEYITWVSGIVAEPM-KIDLPIKVIKTKSGALAKISKDGEDAVTEIEPILAFRTK-SKVKAVIHTGRTHQIRAHLKAVEHPILGDEKYGGEP----FKRVMLHHHKFKIFD------YNFTSpePSDF
>UniRef50_A1R0P0(111-297:331) Pseudouridine synthase n=20 Tax=Borrelia RepID=A1R0P0_BORT9   E=4e-38 s/c=0.86 id=23% cov=83%
---------------IVYEDADLLVINKRRGILVHGDKYS--LDTLINAYLLDEslgslsFKPSAVHRLDRNTSGLIIFAKNINSARILSQAFSSGVVIKKYLALLDGVITKPL-TYKNFLYRDKIARKTFVINDIDKCNAVTDIKPI-LVSKSSTLAEVSIKTGFTHQIRAQCAFNKHALINDKKY---DSQFVKTNYFLHSFLIKFN----------------
>UniRef50_C5M016(1-218:417) tRNA pseudouridine synthase C, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5M016_9ALVE  E=4e-38 s/c=0.73 id=31% cov=70%
------------------------------------------------------------HRLDKQTSGPVLIARKLESWKFIRRQFQKEQVTKRYVCLVDGICANDSGMIDSPIRVRRTEKHTSAEIGSGpaSSSAHSEYRVLERYEEGCTLMSVRITTGVTHQIRVHMAqGLGHPIVGDKKYtpsGRGSELPCATRMpgrvFLHCYELGVkPDKTSGQKLT-------
>UniRef50_A4S075(99-317:334) Predicted protein n=2 Tax=Ostreococcus RepID=A4S075_OSTLU   E=4e-38 s/c=0.73 id=35% cov=86%
--------------MVVLRDSDgIAAVVKPAGVLTHPveggGSELTLMDAALSRFDGQLSDLngldkrGIVSRLDKPTSGVVLLAKNNASHAELLTQFYQRCVVKQYCALLDGTL-PASGSESTPL---------------DGRSATSEYEVMETFIGpswSYSLVRVEPKSGRKHQIRRHMALLGAPLVGDPLYRTARTKQINPNppecvlkalsvgkpgtiFWLHASAVEYSgMP-NGERIVVSAPLP-
>UniRef50_A6LT86(82-289:324) Pseudouridine synthase, RluA family n=35 Tax=Clostridium RepID=A6LT86_CLOB8  E=4e-38 s/c=0.77 id=25% cov=86%
-------------IKIAYEDENVVVIEKWPDVLVHSDSNNSEEPTLTDYVLSYLNDkgdyipeneitftPAACNRLDRNTSGMVMFGKTFEGLKAINEAIREDEIRKYYYALAKGKIRA--GLYEAYILKNPETNTSKIYDTEvkNSKKISMEISIVE-SNGAYSLLEIHLITGRSHQIRAHLAHLGNPIIGDNKYGDKklnsffESKYGLNFQYLYAYKLNFR----------------
>UniRef50_C4XWV4(146-354:432) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XWV4_CLAL4  E=8e-38 s/c=0.76 id=32% cov=90%
---------------VLYEDENILVVNKPAGVPTHPNGIFR-RNSLTEIVRFELGvSVYPCHRLDKGTSGVLVLAKTK-TGKMLQEVLQNKKshVEKWYVARVRGKFPFASCSYTSPVfsintaGTGYLNIPNAERVPAT---SSTHFKMVSYSPElDESIVFCRPISGKMHQIRVHLRNMGYPISNDPLYNAENGLGHAKNQLekeLYAQVLA-EWPCFGIDKTIRPPE--
>UniRef50_B7G3A4(90-271:271) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3A4_PHATR  E=1e-37 s/c=0.87 id=31% cov=79%
--------PQAPFVKVVANSETWLVVDKPGTMPVHPS-GAYHLNSLLPILENTYGKLYPIHRLDRLTSGLVILGKTPEAARQLGKAIKERdSCTKLYIARVRGRFPFNCASHVPNLSSHKSYPPRygeWSVLQDmDGKKdmkaAETSFALLKFDAKsDSSVVLCRPATGRTHQIRLHLQYLGHPIANDPNY--------------------------------------
>UniRef50_D0LDE5(88-291:317) Pseudouridine synthase n=18 Tax=Actinomycetales RepID=D0LDE5_GORB4   E=1e-37 s/c=0.77 id=29% cov=89%
--------PIPFELPILYADENIVVVDKPHFLATMP-RGRHVTETALVRLRRQLGsdDVAPAHRLDRLTAGVLLFTLRREVRAAYQDLFATRAATKEYRALAP-VDDALTTTVTIRNRIEKTAGDLRARVVDGPVNAISDITLLSDAG----LYRLVPHTGRTHQLRLHMASLRVPIVDDPLYPDvrpelaqrPDVGDFSAPLRLVAHALEFTDPFTG-----------
>UniRef50_A7RM79(24-286:330) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RM79_NEMVE   E=1e-37 s/c=0.60 id=28% cov=92%
---------------VIFSNNDLIAINKPYGLPVHGGPGVVLSVAELleefAAIKNYQNKPELAHRLDKyGTdytimlidcSGVLLLTRNKTAAQKIAEMFQSRMVKKRYLAVSVGVPRYEEGTISIPvgygrvgpweriiIRQDLVGKTHKEITEAGFKQAITKFKILDENQSTCSLLEIEPITGHKQQIRVHLAdALRCPILGDHKFssdkpqpqviplrllqllqisGVKGVDGKKGRirpwqrgqipLHLHSHQLVLPkyH--TGSDLVISAPLP-
>UniRef50_Q6BK17(123-311:433) DEHA2F25652p n=3 Tax=Saccharomycetaceae RepID=Q6BK17_DEBHA   E=2e-37 s/c=0.83 id=29% cov=83%
-------------LSIIFENDEMLVIDKPAGIPTHPkGNYRYNSITELVKHDLNLENVWPCHRLDKVTSGILILGTTKQGSKIYSTIInnERDRISKQYVARVMGEFPKDEFVMNCPIFLVNTSGGYIMPSNSRnvPKNSTTIFRRLNYNKElNQSIVLCKPITGRMHQIRIHLRNTGHPIVNDYEYNpqGDATRSHIQRL--------------------------
>UniRef50_D2VR13(114-305:483) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VR13_NAEGR   E=3e-37 s/c=0.81 id=33% cov=78%
----------DRNIPILYDESDLLVVDKPASFPIHP--CGRYRKNSLTYILEEngYGTLHVVHRLDHSTSGVLVLAKNKKVSGEIVEMIKTREkaIGKYYLAVVKGKWKgeyEVSGLVkdlnnsfvkcEKKVYCKNHKNGTWSADDELGTfEAITLFSGIVYNKEKdISLIMCKPITGRTHQIRIHLESIGNPIINDFFY--------------------------------------
>UniRef50_A4S4A1(87-280:357) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4S4A1_OSTLU  E=6e-37 s/c=0.80 id=29% cov=81%
-------------------NDDVVSVWKPATVPVHPT-GQYRRNTVLALLaasRRDLGRLFPIHRLDKNVSGLLLLARSSEAANEMRVKMEAREMRKEYVARVRGAFNdgdatpvsnveslgfDSKGRVAIWRGKKGVTDLDERTLKSF-KDASTKFTCIKTLVDGTSLVRCEPFTGRSHQIRAHLAMLGYPIANDVAYGGALVEVERARAIQHA----------------------
>UniRef50_C7H3R7(118-344:365) Pseudouridine synthase, RluA family n=3 Tax=Ruminococcaceae RepID=C7H3R7_9FIRM  E=9e-37 s/c=0.68 id=28% cov=93%
-----------PKVTVIYEDENIAVLYKPTHLLCHSDRTGDANlvDAFTQYLAQkgeydaggeNRFKPGICNRLDRGTEGLVIAAKSYAALRDMNEIIRTDLLKKEYYTITVGIP--QSGRFTAWWEHDEKNNKVSIHAHqsqdERRKQIITDVDVLRTAG-PFALCKIGLVTGRTHQIRAHLAYLGKPVLGDIKYGNRKmnERTGTRTQALCAVRISFLDiPeenslryLSGKVIKLKDP---
>UniRef50_B6K9V8(1901-2155:2780) RNA pseudouridylate synthase domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6K9V8_TOXGO  E=1e-36 s/c=0.61 id=28% cov=95%
-------PKKEP--DVLWEGDGLTVIDKPPGwhcsdvrydpqtesrqLCCIVSSSRPEPLGLYCSLRFNYPtgklkecNFGLGHRLDVDTSGPIIIAQTLEAWQWIRDQMHKRNISKEYICLCHGTLAEGFHVIDSPIITSTDGRRLQSYIHHAGQPSLTVVKPLAHLEHRELRYpgsttplqftlnWVKIHTGRTHQIRVHLQSLldsrGRPhcLVSDDKYGNGqqvEDFQWCRRLFLHQHRLSFRD-LNDTPQCFVSPL--
>UniRef50_B0SSX5(17-201:231) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SSX5_LEPBP  E=2e-36 s/c=0.83 id=30% cov=83%
--------------QIFYECDDFLLAEKPEGIPVHetkdPSRMDFTR-LLSNHLQ--IPELRTVNRLDLGTSGIVLLGKNKNKNVELDLLLKE--AEKTYIFLCDGIPSWREHRMECFL---KEGNKQVNLVRSGGKKAITEFSILHSDPNESISFGfAKILTGRRHQIRVMLSSLGFPILGDTVYGKKEKTET--RMYLHSFRFYFTD---------------
>UniRef50_Q5DDR8(126-320:438) SJCHGC01065 protein n=3 Tax=Schistosoma RepID=Q5DDR8_SCHJA   E=2e-36 s/c=0.79 id=29% cov=80%
-------PVLNLPIEFIHDSHDMLVINKPPSIPIHPcGRYTLNSITHILAKDYGLRPLRFTHRLDRMTSGLLLIAKDYDTSVRLQSQIASKEVTKHYICHVDGCFPTEpidhctgfeinNGVVvcSQPVGPISPKMGIHAVLPEsaGGKPARTHFLRLNYNSvTNTSLVICRLFTGRTHQIRIHTQYLGYPIVEDPIY--------------------------------------
>UniRef50_D0N321(281-457:556) RNA pseudouridylate synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N321_PHYIN  E=4e-36 s/c=0.86 id=38% cov=68%
---------------VVYEDDDLIVVSKPPSMPTHPCGAYRHNSlhTILQATRPDLPQLNIVHRLDRLTS-------------------ADRQASKTYLARVRGRFPdvlssevqdklvtqakeicpasiitfPEEGavLISCPLRCLSARDGVWE-CHEEGKPSETLVRLV-RTDKCTSLVKCKPVTGRTHQIRLHLQLIGFPIANDPCYGG------------------------------------
>UniRef50_B9W8E1(96-288:405) Hydrolase, putative (Drap deaminase, putative) n=5 Tax=Candida RepID=B9W8E1_CANDC  E=1e-35 s/c=0.79 id=34% cov=80%
------HEPPIPWYnDIiksIYEDNEILVVDKPSGIPTHPTGNYYH-NSLSEIIKQQYnmDSIWTCHRLDKVTSGVLVLAKTKNGGVKFSKLMRDSKqhTKKTYLARVSGKFPEGIHQYRCPIFAVNMNGYLMSGNMEElPTDSTTVFEQIKYNAcLDQSLIKCIPITGKFHQIRIHLRNLGFPIVNDSFY--------------------------------------
>UniRef50_B1ZYD0(19-251:255) Pseudouridine synthase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZYD0_OPITP  E=1e-35 s/c=0.65 id=32% cov=94%
--------------EILERDPNgLLALSKPAGVLSHPNEGKDQPRSLLTchfdAVAECYvwtpegaatsQRWWLLNRLDSATSGVILLAANEELAREIRAQFKRKQVTKVYQALVFGKPPRPVELWRDVVAVTKQGGQIRTTAGAGRVPAECRMSVVRSRGvgeGALALLQLEPRTGRSHQLRVQCAKRHVPIVGDQTYGDFRHnrefakRTGEKRLFLHSLATRFEYAWKGRTHVFAAqaplPAEF
>UniRef50_A9G6K6(470-673:765) RNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6K6_SORC5  E=2e-35 s/c=0.74 id=30% cov=89%
-------PPPAP--KVIYDDDGVLVVEKGPHEPV--ATQPEYLGSLLARCARipgSTTTPIIVHPLDPGTSGLVMLARSEEAAARWGEALA-KTGRLIYLAAAKG-VTPGKGAIT----RDLREGTRTYT-------ARTRYRRLAVASGH-SILRVIPDGGRTHQIRRHLAAIGHPILGDERYGHVptnryfEEKHGLDRSFVHLVRIEIEHPRTGVKMIIEStlPGD-
>UniRef50_A8NJ16(2-216:268) Predicted protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJ16_COPC7  E=3e-35 s/c=0.70 id=34% cov=87%
--------------------------NKPAGLVSQLGRqlpemkTRDTLDKVLKQIERRLelkEALRPLHRLDTATTGCLAFATTQTSARSLSKQFAQGQVEKSYLALVSGgkeTFPGTSGRIDTPI---KYQDGYFDGLGTGGKLSLTEWSLLASSPvLPISLVRLNLLTGNKHQLRIHMAkKLGAPILGDDRYSSSKvaskllsEGRIKPNLYLHASDIAFVRyrqrgPQKRFRLGITAPLP-
>UniRef50_B7G0Q3(3-198:200) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0Q3_PHATR  E=3e-35 s/c=0.77 id=31% cov=81%
-----------------YQDRW-VCVNKPAGMSTHRSGGNRSNQFVVSTLLKRQlsRKVFPVHRLDHRTSGALLFAFDSEMCASLHDALREQSARKTYVCLVRGFWdnffESDTATVDKALTVDGTKRSATTVFT---KLAST--IILNNSAYGeknvpisCSLILAVPTTGRTHQIRRHASAMGMPVLGDTQHGETKvnrwwrQKRGLDRLALHCLSL-------------------
>UniRef50_UPI0000E0E896(1-204:240) 23S rRNA pseudouridylate synthase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E896  E=3e-35 s/c=0.74 id=25% cov=90%
-------------MQVLYDHSDFFIIAKPQGVTMHeasnglPAVLPLFKAALANMAypEAQYAHLHLVHRLDDHTSGCLIIAKHAVAAERFRELFSQQRIQKYYVALSHAKGKRKAGWVKGDMV--NKRKGQWVLTKSVERPAISYFFR-QGLGNGLYLFWVKPFSGKTHQVRVALKSNGSGILGDPQYSSEPAQ----RMYLHAFALDFI--YDDEPIQIHCPVD-
>UniRef50_C4GD18(5-290:312) Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD18_9FIRM  E=4e-35 s/c=0.52 id=27% cov=90%
--------------EIIYEDADIFVCYKPAGFATQtASALQADLVSELKNYRKSRGEsdyIGLIGRLDQPVEGLMVIAKNPRAAGKLEAAQAKGRIDKYYLALTQGLPKgpdcgqeadslhrkgewiflendmlpasrgkngrllapEDKGTKNGhqpapedkgtknghqPAVKDKGAKKTRLPAPGTGeaktacqlapgtgeakkacllapgikgaRKARLEYQILDHSKTKdgraLALLRVHLLTGRRHQIRLQLSGLGSPILGDARYG---ADPNGQPLALCACQLSFPHPGTGERISYE-----
>UniRef50_B5YM19(54-322:344) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM19_THAPS  E=6e-35 s/c=0.55 id=29% cov=95%
----------NINIPIIYENDQLLAVCKPPHI-SHHDDPASNQLGLLSLIRLQqqqqqqqdessfpYPhRLHGVHRLDRVTSGVLLLAKDSSVANELITKFRQGEVSKYYMAIsgkkpkkkkqgwVKGQMvmgrrgsyklvNENRDVLDEGDGDDEvEDGGEVSQVKKKGGYAVTRFYTAglgdlqlaplpkcdgDESNDDELLipktaILFQPHTGKTHQLRVAAKSAGIPILGDVRYGGgtvtqREENANFDRTYLHASAIHFQ--LNDEDVTIWSPPPF
>UniRef50_Q6KHG9(107-290:314) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Mycoplasma mobile RepID=Q6KHG9_MYCMO  E=1e-34 s/c=0.80 id=30% cov=82%
-------------LEIIFENLDILIINKPNNLIMHSSKnsLDEQVLNYLNYVKIDSFVPTHIGRLDKETSGLVVYAKNYKTLIELLD--KQSDFEKIYTFIPFCNLSEKDVLVTVNISEDEINK-KMQISNE-GKKSITRI----FYDGNSQRYYAQILTGRKHQIRLVLAdFLKCPILGERKYAN---LTKDKRLFLHSYKLTF-----------------
>UniRef50_UPI00006CDA44(88-309:881) RNA pseudouridylate synthase family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CDA44  E=2e-34 s/c=0.67 id=25% cov=85%
--------------MIIYENKNIIILNKANGVSCQGGQDVSLNLVTMGQqylINQTNQKYLVAHRLDKVTSGVLMVPKNQQIAKIYGNLFNDKSnINKYYIALVRNSPKNFKAMINAPI--EYSQSKQRAIVsniiDENSKSAHTHYQVLAQFKmedknlaakiinsehdyikdwGDFSLLKIRIQEGRKHQIRVHLSEIsKTPIVGDARYFDKNHQESLfqynkdQSIFLHCYQ-TFI----------------
>UniRef50_C1N0H2(110-361:497) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N0H2_9CHLO  E=2e-34 s/c=0.59 id=27% cov=85%
-ALHRHEPPTlDRPVEVIAVADDLVAIHKPATMPVHPTGQYRKNTVLgyLAAHRRDLGKLFPVHRLDKNVSGLLVMARTPTTANAMRTQVEGREVSKEYLALVtmkifnaggnaetvaaaaLTAFAREEGTdvfaarCDAAVAYDERARVAScdVSVADGAKDASTAFELVARGewgvgggdgggdggsacpfedvvvrgglPRRALLVRCRPTTGRTHQIRAHLSRLGWPIVNDVKYGGARA---------------------------------
>UniRef50_C5LRC8(120-373:439) Ribosomal pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LRC8_9ALVE  E=3e-34 s/c=0.58 id=34% cov=85%
---------------VLHETKHLSVIWKPAHwhvsvtsaiagaaegevddatdeeaeakdaafktMTSANGNASGLQEWVEEAysgypIARDRHHAHGIlHRLDVGTSGPLLLAHSYKGF-YMGRLvFCSHQIDKEYVALVKGHM----GTVGKNIVISDRIKILKStldngqsysttcVVAPDGKPSLTEVVPVAHYNDGsgeeYSLVLVKLHTGRTHQIRVHMAYIGHPLVCDPKYGNPTdpeaakavcaiDRLWCPRTFLHSYRLCYNQPM-------------
>UniRef50_Q6MN39(2-205:225) Putative pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MN39_BDEBA  E=1e-33 s/c=0.71 id=31% cov=85%
-------------IQIVFENTHFIICDKPAGVLSTPSRFEEDdaRLCLGTALQKEKGfQIFPVNRLDFEVSGLVVYAKTAEAHRKANAWFEHKTVKKTYRALTTGqsyahipanvpneklKLTPEVGN-TFEWRCRLLRGKRRAYESPQGKECLT-VAVFRGMQGDYQVWDLNPVTGRSHQLRFDLSRHGFPIVGDKLYGSTVELAD-NRIALRSYRIDF-----------------
>UniRef50_C1MIE2(196-531:547) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MIE2_9CHLO  E=1e-33 s/c=0.43 id=37% cov=94%
-------------LEVIHEDDAILVVNKPPGLRFHPVHRFE-GNSLLSRCIGHIRRrrrrrrrasddggedggedadadgeekvdddedahaddmPHIVHRLDMDTSGVCVFVKDKSLVDGFARQFRgdDAGVKKEYVALAVGTVPRGDvvafsseaeevrdddddaaaaaaaaavgraFVVDAHIGDHATMPEARAVhppplvasttratdpsaDASAPKPATTACVVSSSAAARdglvAALVRCAPRTGRTHQIRLHLALANLPILSDPLYGPHvrfggaamaenargkaggeeedgggggdrgyfaaelegywGGDLWLGRQALHAASLTVRHPKTDVSMTFRAPLP-
>UniRef50_A5DTZ4(103-279:430) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DTZ4_LODEL  E=1e-33 s/c=0.81 id=31% cov=79%
--------PENP-ISVVFEDDDIIVIDKPSGIPVHPtGSYMFNSLSEIVKEMFNFDNIWTCHRLDKVTSGVVILCKNRDAAvKFLNILLEKSdKVKKIYLARVNGKFPDGVYRYTCPILAVNMNGYIQPSNLESLLTlTSTIFERVNFDSlSNTSIVRCQPISGKFHQIRIHLRNLGFPISNDLFY--------------------------------------
>UniRef50_UPI00005230E6(163-375:494) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Ciona intestinalis RepID=UPI00005230E6  E=2e-33 s/c=0.68 id=33% cov=80%
---------------VIYADNKLVIFNKPYGLPMHDGDGTKQTvknvlpflSKMVYGINTDIP-LHLCHRLDKNTTGITICSTDAEMADYVMGLFRQRRVLRKYLAVVVGEPEPMKGVVDMPMsesivsaTKSTKRHSRMIIkpdvryDDATGKEyplrnagghtAITHYRTIDTTGD-LSLVELQPQTTVKHQLRVHMAdGLSCPILGDHKysrYGSLAPQVLPPR---------------------------
>UniRef50_A9UZH2(118-330:512) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UZH2_MONBE   E=2e-33 s/c=0.68 id=30% cov=85%
-------------------DPFVWVVNKWAGLVTQGEKDGQSLAAYLKYMRMRHDDdmrlltrpLSLVHRLDRNTTGVSFIARNPVVHALLQDVLATHQAQKIYYATTLGVPFPRKGEIKGYLTPHKNGVKLDATPQnKNSVFSHTRYQVVDALDREAALVRLEPVTGRRHQLRAHLAqGLRTPILGDTQYGVGCSNALRPllfptkgrpstkvvveglPMMLHAFELVIPD---------------
>UniRef50_A4S6L3(42-178:213) Predicted protein n=2 Tax=Ostreococcus RepID=A4S6L3_OSTLU   E=2e-33 s/c=1.05 id=41% cov=61%
-------------------------------------------------------RPRPVHRLDELTGGLLVCAKTRMAMTALSAAFEKREVRKRYRAVLRGRVESKKGVVDVPLG---------------GLEALTEYSVVreyesEEYGGILTLIDFFPKTGRTHQLRRHAKALCAPILGDVKY-DYASRAHEDGLFLWATGIVLP----------------
>UniRef50_B7XJU4(58-256:331) Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJU4_ENTBH  E=3e-33 s/c=0.72 id=35% cov=78%
------HEPKQPHIPTIYIDDEITVVNKPFGIPCHP-VGAYHYYTVTKTIFKNKP-VGCVNRLDIPVSGVLII--NTCNQKRIHEYLLNS--KKIYIAKVIGQFIfSDEQLHKLGIEKRISNgksiiivnksllldpKTKKQKISDDGKFAETHFELVSY-QNQYSMIKCYPITGRTHQIRVHLAYIGFPILYDTLYGS------------------------------------
>UniRef50_A7AQ79(151-353:465) RNA pseudouridylate synthase family protein n=1 Tax=Babesia bovis RepID=A7AQ79_BABBO  E=5e-33 s/c=0.70 id=28% cov=80%
----------DSSVRILHEDDDYIAVSKPSSLPLYHTGTYYYNTLVEVLKNEVFKDsartLYPVHRLDKLTSGVIILAKSSKAASEFCEGIRNSRFRKVYIARVKGDFTNVFGdheciSINDGIGVGNGSvaccHGFMRCVShklsmheftlddtkKDVKVAETRFRMLSYNSSlDESLLLCYPVTGRTHQIRAHLKYLGYPISNDKCYNDGE----------------------------------
>UniRef50_Q47XX3(112-288:318) RNA pseudouridine synthase family protein n=2 Tax=Gammaproteobacteria RepID=Q47XX3_COLP3  E=1e-32 s/c=0.80 id=31% cov=74%
---------------------------KPYGMLSQGSKWSDHC-TIARFAQQNLPNerpAFIVHRLDRAATGLIIVAHSKSAARALSHMFEHHQLEKHYQIIVHG---------------DHRKRAQPDIIDSdvDGKKARSTFTCLAYDEmTDQSLIKVKIDSGRKHQIRLHAASIAMPVVGDRLHGIADKDEQRN-LQLCAVSLRFVCP--------------
>UniRef50_C1MPG5(72-335:348) RNA pseudouridylate synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPG5_9CHLO  E=1e-32 s/c=0.53 id=34% cov=85%
----------------------FVVVRKPAGVYV---------DDVLAALERDASasasaspspsprRLHLAHRLDRDTSGCLVVATSTRACAALTRAFADGKVRKEYLAHCSsaaasssseprepdpspspsldgarpltlrtGHGRSRNGLWRVYplsdVGRALPRDPGRKTTLV--KIAETSLVVVATAAarggggggerSRCAYVRATPTTGRTHQIRLHCAHAGAAIVGDVKYGGPRVveeeeeeeekeketqeddaliDTRFDGFRLHAAKIAFPHPtREGQTVEVECPPP-
>UniRef50_P75230(86-290:326) Uncharacterized RNA pseudouridine synthase MG370 homolog n=4 Tax=Mycoplasma RepID=Y548_MYCPN  E=2e-32 s/c=0.69 id=25% cov=86%
-------------LQVIFEDEQLIVVDKPAGVVCQPDAKHELFNLANSLLKHcGYNQyfknslsfiPRFAHRIDRNTCGLVIGAKTNQALQELEAVFRHNLLMKQYQGLVFGPFNFK-GTQKAYWAKDAYQalVTVKAKPFPNAKPITTIFENSKYLTKlDLSLLTIRLVSGKTHQIRACLNLLNTQLVGDRKYqllQFKNRNRDFKHQALHATNLSF-----------------
>UniRef50_A4E6R1(2-123:154) Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6R1_9ACTN  E=2e-32 s/c=1.16 id=31% cov=52%
----------------------------------------------------------------------------------------------------------DEGTINTGIARSTRDRVKMAVSDDPfARQAITTFKVLErfdstRFDDGYTLVECHLFTGRTHQIRVHMRHINHACVGDPLYGKCDARAdqGLTRQFLHSWRVAFEHPVTGERIECrdELPWD-
>UniRef50_C8RSX9(65-311:313) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RSX9_CORJE  E=2e-31 s/c=0.56 id=29% cov=95%
--------PVPGEIAVLHQDADIVVVDKPPFLATLPrGQHITETALVKARVQLGIPELSPSHRLDRLTRGVLLMTARPEIRGAYQTMFERRIPHKVYEALTP-LPEEAPFAPIAPLAdwrswdpptPERPWRLEHSMSKTRGHLStiltdgspnaltlVTGLRTEWREGRKILVWRLEPHTGKTHQLRVVLRSLGLPILNDPLYTEltdaalfsidaptprpvyVEDEDFSSPMGLIAKELRFPDPLSGQERKFVS----
>UniRef50_C4QP03(44-292:370) Ribosomal pseudouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QP03_SCHMA  E=3e-31 s/c=0.55 id=33% cov=87%
-------------LRVVHENQGFLVINKHPELLINCTTPWINCLTLQMQLFYNRPRyvnwklknmFHFVHRLDCPTSGLICIAYDTKAASMIRRAFENKEVKKYYLAIVWGYVGSfcDSGLsssfvkhesklvhhIQMSIGsfrYLWPNtGRKQKIIVPithpecyRPRESLTTVIVLDYGklmGEPATHILLIPETGRRHQLRVHCAiGLGHPIAGDTTYvrrpfdhpnivylndiytmHNVNLDYKLKHMMLHAYTMKI-----------------
>UniRef50_B8LBQ6(181-348:405) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBQ6_THAPS  E=5e-31 s/c=0.81 id=41% cov=68%
--------------------------------------------------------------LDRATSGLLVVAKTKPAMVDLSSQFKHRKVKKTYTAIVNGDIQErPESSISSREAKqlgvcientGSHDFRWQFVDEElDGQSAVTIWRTvdkssLEYAWNNTiAMVELKPKTGRYHQLRRHMAWVyGCSIVGDKSYdGSGQAKLLRNeGLYLCSNKVTLQHPFYNTP---------
>UniRef50_C2MA71(86-299:341) Ribosomal large subunit pseudouridine synthase family protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA71_9PORP  E=5e-31 s/c=0.64 id=27% cov=93%
---------QHPLIEELYRDEQFIVLHKRPGIPTisVGGASKSSLFQVVTHHLKKvdpNEKIFLLNRLDRDTEGIIIVARDRQLQQDLLAEWHSFVLFNSFEAVVLGALDTSSGELTTrPTKDKKRGSDKRRTSTSSGrdkKPAsfRASYEVLSTGP-YITRLSLSLLT-RNNSIRSTLASIGHPLLGDHRANDSIAPDLSKYLALRATELAIFHPIKRQKMLFT-----
>UniRef50_A9FG19(68-288:326) RluD4 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG19_SORC5  E=5e-31 s/c=0.62 id=29% cov=95%
--------PGAPPVEVLARWGELLVASKPAALPTEPERRGTRSlvTEVAELLgLRDLPHAAS--RLDVGVSGAVLCATGARGRRHVVAMREAGRIARVYVGVAGGRV-EGSGTWDAPIGaaRARGGRSLPAVGGADAKDASTHYRavaSAGGGAAPATLLRLDPVTGRTHQLRVHAAHAGAPLLGDRDHGGARSVTTArgrviplSRVALHALRVTVPD-ERGELCAAIAPVP-
>UniRef50_C1DA62(11-188:236) Pseudouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA62_LARHH  E=1e-30 s/c=0.76 id=31% cov=80%
----------------------FLVIDKAPGTHVHR---DGEATGLMDRLRDDTGcdTLHLVHRLDAMTSGLLLVARSADAAAALGQALAARQVEKFYLALSDRSPRKKQGWVIGDMERSR--RASWKLLPTRQDPAVTQFFS-AAAGDGRRLFLLRPRTGRTHQLRVALKSLGAPIWGDPLYHPQEpGREAPDRGYLHSYGIGFV----------------
>UniRef50_C9N1D6(103-316:328) Pseudouridine synthase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N1D6_9FUSO  E=2e-30 s/c=0.63 id=21% cov=85%
--------------MVIFENDDFFIVNKKEKVPMHKGTGHKYGLAEVFKKIYKSDNINFANRLDFETSGLVIGCKTLKFLRYISQKIRDNEVHKKYFAVVHnkniirrNKLEREKFNLEDFKIENYLTTLENKVivsenpVSRESKKSITYFKHVnfnklkkskeilklfEKNNKNILLLDVELITGRKHQIRAQLAHESLFIVGDKKYG---IKDGSDRFFLCCYSISFD----------------
>UniRef50_A9V182(13-244:289) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V182_MONBE   E=3e-30 s/c=0.58 id=32% cov=85%
---------------VIYEDNHLVALNKWRGLAVQDAAGS--PSTVLSNVdvfqqNKDGFVPRLAHRLDQNTTGVLVLAKTAEAVLRLNRLFQLGAVAKTYEAVLAGQVTKPTGTLkgipeliteeEDANSELTSNQPLFKTSASwSHSTAQSHYTVLASAQVNdgrpsrtkpwLTRVELRPTTGYKHQLRIQCAdGLRAPVLGDKRYGGGQEQvspiilQHLQRhglrtaahpyglvMHLHAKQLVIP----------------
>UniRef50_Q4D881(89-431:474) RNA pseudouridylate synthase, putative n=4 Tax=Trypanosoma RepID=Q4D881_TRYCR  E=6e-30 s/c=0.39 id=32% cov=98%
-----FNPPRELepdvdeYIHVVHDDDAVIVCVKNGNLPVAEGGRYSGNTLVGLLERRDavsfvsekYSAARqkmdqtreedgdagvsvhkvpasyyPIHRLDKETTGLVVLAKQLAAARALSRQFekqseritaqvskrtdpagdglstavfekllaEEKVVTKVYVAVLAGAGPEgadfvmcdrigllfdslwNEGDTEDAKKHNKLKKLKMACfpvnlkenPKRHGRPAASRVRILSSDKKlGVSVARVDILTGRTHQIRIHCAQLGYPVLGDKLYetttpgvvggccavpddtyiarakgneglvSAAAPRLRVKRHLLHAAVLSFLHPISEERlMYFADPREW
>UniRef50_D1J7I2(79-257:278) Ribosomal large subunit pseudouridine synthaseC n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7I2_MYCHP  E=9e-30 s/c=0.74 id=25% cov=81%
----------NINFKVIYEDKNLLIIDKAPNIAMH-SEENCLDDQVLKYLNFKKvssFRPASIGRIDKKTSGLVVYAKNYKTLVEFEN--KQNKFDKIYQFVSD--FDEDVLDITVRLKKDIKNE-KMIVDNNFGVKAQTIF----YKEGNRKF--AKIITGKKHQIRATLAYLKTPILGDIKYGGK----FAKRMYLHSYSIKF-----------------
>UniRef50_A4S879(47-250:359) Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S879_OSTLU  E=1e-29 s/c=0.64 id=27% cov=78%
--------------EIVFECEktGLVVVEKPAGVPVlagaAPGWQGYGNLAALTSALRrrraakddaadetrrtkraratgDAGKVWAVNRIDAPVSGIWLAATSPKLAAKANVWMSKTSLGKTYLALVRGAQIECGVRIDSPLAKDKESSLAV-VSEKDGKPCATRVVVLqRRESEDVALVACRLEShGRYHQIRAHLSSIGHPIVFDSAYGDED----------------------------------
>UniRef50_Q98R93(78-279:282) RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE C (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) n=1 Tax=Mycoplasma pulmonis RepID=Q98R93_MYCPU  E=2e-29 s/c=0.65 id=31% cov=87%
----------EQKFNVIFEDQNILVINKQAGVSMHSdeNSLDKQVLSYLNFKQVDSFVPSSIGRLDKVTSGVVVYAKNYSILKTLK---SNEHLRKTYVFMSNITLEPNQ-KIEH-VFYHKYNPIKKKAelfkeNVEESKITKTlLYKV---KNNNYA----ELITGRKHQIRATLSKLGFPIFGDVKYGGKKD----KRVYLHSYKIKF-HSLKGEfeylnNQEFIAP---
>UniRef50_C4LG57(108-354:364) Pseudouridine synthase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG57_CORK4  E=4e-29 s/c=0.53 id=30% cov=89%
----------------------ILVVDKPPFLATMPrGRHITETATVRLRRATGNDNLVPAHRLDRPTSGLLLFTTHPRYRGPYQTLFARRQVRKTYQAIAPYHPvlaestdraeiehvAIDSGTISLeDDGIHVHQRMEKthgfiQARLEPGKPnAETVISSIRMLTDdderalregyhnwfgdplcdtRYALYTMHPLSGKTHQLRMCLNSLGVPIVGDQVYPRilpeaidahqHVDEAWHQPLCLRSTQLSWTDPNLHRPITVTAP---
>UniRef50_C1M2U8(543-761:875) Ribosomal pseudouridine synthase, putative n=2 Tax=Schistosoma mansoni RepID=C1M2U8_SCHMA  E=5e-29 s/c=0.59 id=32% cov=75%
--------------------ENVIALNKPRGIASQPGADCKHNiVDLLPRIeslirkrnhhgkgeEKYIGELSTVHRLDKDSSGIILIARNKDSALKLQEAFSRRWIKKDYLCITVGIPRSDYGYIQLPLVERNFNGIRKmctpqlnrrlqeltckqtqldidneaneydvtdaftvlydKMRTNNNQP-TTWYNLID-KQNNAALMLCSTLTGIKHQIRAHLAFgLHTPILGDHKYSHAE----------------------------------
>UniRef50_D2L201(86-269:313) Pseudouridine synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L201_9DELT  E=2e-28 s/c=0.69 id=32% cov=81%
--------------PVLVQTGDFAAVSKPAGLHSaaiaHGG--GQSLDDLLPALFPDRA-AILLSRLDRLTSGIVAVALTPGAGTRYRDLEDAGQVAKDYLAVVHGVIADP-FVVDFRL--DTADRAKTRVRFKSEPDPlrHTQVEPLDRL-DGLTLVRCRIAKGARHQIRAHLAGAGHPLVGDPVYGRGEGE----RLHLHCAALA------------------
>UniRef50_Q73NR9(12-236:261) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73NR9_TREDE  E=4e-28 s/c=0.56 id=26% cov=87%
--------------EVIFENEAYAVLYKPRGMPTAP-LSEDEEGTLVSWFLKRCPeavsvkgkkdiEAGLVHRLDTATSGLVLMAKNQESYDALNLMQGNDLIKKTYVAFTdidnESDLNADFSRLNLPYRISsqfrsfGPKGKKvlpvfygMRDFSSTAKIYTTNIIDINNLDDSVPRVTCTLTQGFRHQVRAHLASIGLPIYGDPLYNGKfkdfpqeKIEDHSYPLQLYAVGLSFPEP--------------
>UniRef50_Q602D5(75-259:281) Ribosomal large subunit pseudouridine synthase n=3 Tax=Mycoplasma hyopneumoniae RepID=Q602D5_MYCH2  E=4e-28 s/c=0.68 id=27% cov=82%
-------PEFKLNLKIIYQDENILLVDKPQNLQVHGGKFNLDL-AVWNYLKipeNQVFKPSHIGRLDKKTSGIILYGLNYQSVVELNQ--KQKFFEKIYTFKSDINLKN---TIKTDVFIRKNNfQQKMEVTLKSPNSffASTTF-----YSKNQKKFAI-LHTGKKHQIRVSLSHLGFPIFGDEKYGGTRDKI----LYLHSFSLKF-----------------
>UniRef50_B1VE82(138-419:422) Putative pseudouridylate synthase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VE82_CORU7  E=4e-28 s/c=0.45 id=29% cov=94%
--------PVPGQLRLLFQDANLLVVDKPPFMATLP-RGQHIVETALVRARRQFgiPELSPAHRLDRLTRGVLMFTVRPEVRGPYQRLFDERVPEKTYEAvtlpadeapfppiprfrgwqewpaptpeqpwLLRHHMVKERGRLATYLVEPEAPAIDATAPTDSGAAAASpshdmflappnaLTKVVGVRSERRALAiaggptprerrvlvwELVPETGKTHQLRVALRTLGLPILNDPLYeelsdealrdptaalpspPFAGEEDFGRPMELTAQRLRFHDPLTGELREF------
>UniRef50_UPI00019264FF(32-215:329) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Hydra magnipapillata RepID=UPI00019264FF  E=7e-28 s/c=0.68 id=28% cov=75%
----------------LYMKDGLLAIHKPYGIPVHGGpkiklSIADFLPALEQKHGLLAGSLELAHRLDKNTSGVLLLTYKKEMAKYLADLHENRQIEKSYLAILLGNVSRVTGVLNGELHETLRNGQFKQTINEISinKSSVeTNYTILDSNQDTCMLCLFKTFTGNKHQIRVH-AYelLKCPILGDHRY--------------------------------------
>UniRef50_C6BZC7(118-291:302) Pseudouridine synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC7_DESAD  E=1e-27 s/c=0.72 id=29% cov=78%
-------------------------VYKPEGL--HSAAIAGSAESSVEECLSGiFPGKEPIlaNRLDFLTSGMLLIAFGVERENEFRECEDSGTVDKVYHAKVHGIP-EGPFVVKNSL--DTADRKRTKVLDDQAPEERwSSAEVVERYDDGTSLLEVRIAKGARHQIRAHLAHAGFPIVGDPIYGREDS---ADRMYLHHRKIVLP----------------
>UniRef50_C4XKF0(88-262:290) Putative pseudouridine synthase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKF0_DESMR  E=2e-27 s/c=0.71 id=27% cov=78%
---------------------DYVLLNKPSGL--HSAALAQGGGESVEALLPDIFPGRPsflLSRLDSLTTGLLPAAFSPEAAATYRDMEESGEVDKTYLAVGHGEPDVTYFRCDGEL--DAADRKKTRVLDRATIDSLrmTEVEALETRG-GVTLFRCTIKKGARHQIRTHLAWAGHPLVGDPLYGQGEGE----RLFLHCAGI-------------------
>UniRef50_D2VYL5(154-352:464) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VYL5_NAEGR   E=6e-27 s/c=0.62 id=29% cov=76%
------------FIRVLYHDDEFLVIDKPSSIPVHPA-GRFVKNSLHYLLESALGRkLFLIHRLDKVTSGVLIHTWNAALAKSYQDTMKEGNVRKCYLAQVYGEFPEtenmsgehvllngqsfhkdKEGFIHVKNKMVYKQNdwtfIWRADSSENGSDSTdpkntdTAYTLVKRiyydPASSRSIVIAIPITGRTHQIREHLRVMGYPIIND-----------------------------------------
>UniRef50_Q38EM9(999-1217:1279) RNA pseudouridylate synthase protein, putative n=4 Tax=Trypanosoma RepID=Q38EM9_9TRYP  E=1e-26 s/c=0.55 id=31% cov=83%
----------------------VAAVDKPAGMSTtlHVGH-PHLLDFLAGNLPWKGPSApvlfqhGLVNRIDLGTSGLVLVADTEASLEEARRAsIVERCVEKVYRALVLHCPPPISridtsecwylnpcGIIMCDVLANGADFSLQIAAYNSSKggalpvgamdrrSATTTYRVLQYFPrSGVYYLEIHLHTGRRHQIRQHFARLCHPLLGDGRYSRRAqvvgEEFGLQRPALHAVRVTLT----------------
>UniRef50_C5K8M1(333-520:602) Ribosomal large subunit pseudouridine synthase D, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K8M1_9ALVE  E=1e-26 s/c=0.64 id=38% cov=61%
--------------------------------------------------------------LDFATSGALVLTLNKTADRETSALFQFRLTKKVYIAVCEGWVGDDELM--------KPRIITTGISSEgGGKMSSTIAVPVSTGHLlcddiKCTVYILRLLTGRRHQLRLHLSYIGHPILGDYTYsthlPKGGRGPTLPRMLLHAWRLTLP----------------
>UniRef50_C5YIB1(182-335:439) Putative uncharacterized protein Sb07g027030 n=1 Tax=Sorghum bicolor RepID=C5YIB1_SORBI  E=8e-26 s/c=0.77 id=30% cov=64%
---------------VIHRDSAILVLNKPPkvpmkgHLPVH-NSMDVLAAAALSYGNKEGPKLTW-----------------NKACEAY--------VQK-YWALVIGTPKEREGVICAPISKVLLDDGKAERVilahpsgIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAeALGTPIVGDYKYG-------------------------------------
>UniRef50_Q4Q7A0(212-497:533) RNA pseudouridylate synthase-like protein n=3 Tax=Leishmania RepID=Q4Q7A0_LEIMA  E=4e-25 s/c=0.41 id=35% cov=74%
-----------------------------------------------------------VQRLDKETSGVVVLAKNSVSARTLASQLEAQTkgcadavesrlrerghavalssdafdellrlkaqsVHKTYTAVLRGAAPEDHTFVVVNcmdcMAKHPTHSweaqhtqlKKLKMCCEPvkemlfshaaaalpqspkeqqtrwGRLAVTRIRVLASNKKlGLTCVQVELLTGRSHQIRLHCAAVGYPVLGDKLYttmtpgreGGATAvsdavylervrreddpylpidddvsgaggssrsgKMWCRRHLLHATRIIFAHPdVSpARLMTFMAsPAPF
>UniRef50_Q5DGR1(245-502:567) SJCHGC01427 protein n=1 Tax=Schistosoma japonicum RepID=Q5DGR1_SCHJA  E=8e-25 s/c=0.45 id=30% cov=84%
--------------------ENVIIMNKPYGIASQPGADCKHNiVDLLPRIesmirkrnhraskvkEETVDELSTVHRLDKDSTGAMLIARNRDASLKLQEAFARRWIKKDYLCITVGIPRSEYGYIQLPLVeRNFKEFHKMcipkldrhlqelackqtqldendetneydvtdafsvlynKMQTNNNNQPVTWYHLLDQRND-AGLMLCSTLTGIKHQVRAHLAFgLQTPILGDHKYSHGEYlapqrlpkhllEALNVRQpkvrylalHLHASSLHLR----------------
>UniRef50_Q4A6V6(65-260:281) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6V6_MYCS5  E=9e-25 s/c=0.59 id=29% cov=78%
-------------FQIIYEDANILIIDKKENLVIH-GEDNSLDNQVLSYLKHkqiDSFKPSHVGRLDKETSGLIVYAKNYLTLKQLNE--KSFNFKKVYQ-------FKSDFLSSSPLelklyfYKDENNKTKiSKTQKENSKLAHSIF----YCENNKKF--AQIITGRKHQIRLSLAYLNKPI----YGDKKYKGKKSTRLMLHSYYLKF-----------------
>UniRef50_B2S2A1(96-283:345) Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S2A1_TREPS  E=2e-24 s/c=0.61 id=23% cov=81%
--------PGTPKLRVLpsvvFKTQDLLFFHKPAGLCVHGPRSLDAW--VRGQGRAHVPpalsfRPGPLHRLDRGTEGLIAFSRSLRGAQWFSAALQQHTLRKFYL---------------AITAAPARTAAAARTLVRPGE--VTHVQTVLHSCDSALVLRViVPVTGKKHQIRRYCAAQGFPLVGDRTYGGASQHGNARytRFFLLAWCVRFP----------------
>UniRef50_C5DSY2(2-199:250) ZYRO0C03894p n=2 Tax=Saccharomycetaceae RepID=C5DSY2_ZYGRO   E=3e-24 s/c=0.58 id=30% cov=79%
---------NKPVLKIVHECNNYFLINKPPNVLSQPGNVHRwiyhglyknqHVNTpkvLLDELksqsstsKRDFDSWRLVHRLDSCVSGGLLVATNKNAAKYFSRNLKEGgnkgyKIDRRYVA-----------MIDNPGKGDPKYLNEYGIIDKMGM--VSKYR---RFDEKCILVELS--TGQKHQIRKHLSHIlKQPVLNDVKYGGPLLPHTDPLQiALHAA---------------------
>UniRef50_C1DZS3(249-445:474) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DZS3_9CHLO   E=2e-23 s/c=0.56 id=34% cov=65%
------------------------------------------------------------HRLDVATSGVLVLARRSSFAAEFNDALRRRRVTKTYECVTAravpvGVLehwtEESSGAREGParfeMRELEPGDPRWRDVAADGKYSddafVTpdgrklcVLRVLgcEETEGLTKRLtkrlageageageasrayvsTIELVTGRTHQIRAQLSAIGCPILGDVLYGGvdlsreggatPRVLRDDDRLCLHAAEMR------------------
>UniRef50_D0NJP5(64-423:458) RNA pseudouridylate synthase-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJP5_PHYIN  E=3e-23 s/c=0.31 id=38% cov=92%
------------HLRVLSRDEHFVVLNKGPDV-----RMDGAFDVTLEKaLARDFPQVEKfrwIHQLDFATSGVLVVGVNKDATATGCRLFREKQVQKEYLAVVRGHLpfnpaesvdtaalpakactfsklglliqdmeemerlrnqqrgsrahqktpgyprgvrhgpnlftmeqaqllpeareltpaelaftkmtwhdltKEEKGaytekakadkrrflkefseflnqekirlarkrkyesfdgedseeanepvayVFDAPVIEPHRSTGvfRMLVGTETdtaAKQSTTMCFVLGhaiYKGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDE--APRMMLHAWRIWLRgRPADQKKygdLYFESPDPF
>UniRef50_B6W881(81-193:195) Pseudouridine synthase n=2 Tax=Bacteria RepID=B6W881_9FIRM   E=3e-23 s/c=0.97 id=27% cov=43%
-------------LDIIYEDENIIIIDKKSGVLSHAASSSDYGKNLVDQMTSYLYktnkvnsrdltfRPSIVNRLDRNTAGLIIGAKNAKSLRALNEAIRQGKIYKYYLTLVEGEIKK-----------------------------------------------------------------------------------------------------------------
>UniRef50_C1E520(58-333:372) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E520_9CHLO   E=5e-23 s/c=0.39 id=32% cov=85%
---------------VLYVDprARFFVVNKPAGMYVenvldfierymeevrraperHSERSKRAKTCsdgatsireAFDSLAKVGERFQLLHRLDRDTTGCLGIACDKETNRILSRAFQEGRVKKHYVAHCINtkfaddfQKKWKDWEVDEPFedgsramtwpqrfcnfrlechtghGRSKHGLWRLYAKEDVGrelpggskvKEARTNlYRgfdsdsdskRLAHLRELQSFpVVAEPITGRTHQIRMHCSQY-FPIVGDYKYGYDdtadddvvqEEREKGYR--LHSFSLELP----------------
>UniRef50_Q750S3(7-190:260) Pseudouridylate synthase PUS5 n=1 Tax=Eremothecium gossypii RepID=PUS5_ASHGO  E=9e-23 s/c=0.59 id=28% cov=75%
--------------PILHEHKHYYIVNKVHGIVCQPpdlrTWYKYHDYEppvLLDLLRKQHPNFGGevwrtVHRLDEPVTGGVLVSRNKRAAAMFSRSLALGGnrgfpLTRRYVALLarEAKGLPSEGRIT---MGDM----------------ITDYKRLEND-----LVLLQLQTGRKHQIRKQMAQVfGQPVVNDKMYGGDSVDGIVDNLiGLHSAFIG------------------
>UniRef50_B0W634(12-289:493) Ribosomal pseudouridine synthase n=1 Tax=Culex quinquefasciatus RepID=B0W634_CULQU  E=1e-22 s/c=0.39 id=30% cov=68%
---------------------------------VHPcGRYRHNTVVFILAKEYNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEHQIRNRQVQKEYICRVEGEFPESSPVSNSAnhpaaapaqqqrehtssrssrgkrrrssprtallvvaarhqakhedeerertLGGDPsPHRPVKKggslnhhtrtaensltsnalprskrclvagggtaddellgmgsntldgiieckepievvsykigvcKVSPKGKECTTTFQKLGYNG-SSSVVLCKPLTGRMHQIRVHLQYLGYPVVNDPLY--------------------------------------
>UniRef50_C3JBT0(84-292:330) Ribosomal large subunit pseudouridine synthase family protein n=2 Tax=Bacteria RepID=C3JBT0_9PORP  E=3e-22 s/c=0.51 id=23% cov=89%
--------------KVLWQDDWFILVQKEPGIPTIASKPGDRH--TVYRIVADHYKSGdarekifLLNRLDRDTRGLILFARDREVQQEILDNWEKYILSQTFSALVEGVVPEEKGEFApppKPKKTVGDKDTKKKVVVS--RRSRATYLVEERGQWRT-LLRISLL-GRYNGIRSQLNEKKYPLVGE----SKGVIKGAPSIALSQQELVLLHPITKEKLRFESPIP-
>UniRef50_B7FYH0(78-308:311) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYH0_PHATR  E=3e-22 s/c=0.46 id=31% cov=87%
----NHVEPTFIHgnVTILARTDRYVVVAKPPTVVCHHSEWTGSRSDpfqipMLQRTREAMGGncVNLVHRLNWGCSGCLLLtyaADTADAEiyipnttATLIASMKETASLKTYLALVRG-----EGLLQ---GRDFKQEGWFKVDRpiknEKGilNNATTWFRFVagqdndsgRINQPRASLVLARPETGRWHQIRRHLNGLSHPILGDTSHGNSHVNREwrdlrgmpAQRTCLHLARLQL-----------------
>UniRef50_C7LVN5(79-250:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVN5_DESBD  E=5e-22 s/c=0.62 id=27% cov=77%
------------------RNESFAALAKPDGLHTVAGQEAACLESCLPGL--GLEGWELLNRLDCLTSGLVLAAAEKRDAAAY-KVWQDaGQVSKWYLALARGEVATLEcrGRI------LDDKRSVVRVTADEDEPLRwTRVRALRQIDGNTLLL-VKIFKGRRHQIRAHLAHAGHPLIGDPVYGVCEPGG----LYLHHWRL-------------------
>UniRef50_UPI0000567073(92-261:262) UPI0000567073 related cluster n=1 Tax=Danio rerio RepID=UPI0000567073  E=9e-22 s/c=0.62 id=26% cov=64%
----------------LYEDQNIIAINKPYDVPLH--NINGIRNSIAECLpllakitdnMRPGSQLHLCHKLEKETTGVLILAKTEEAAEHVQTLIQSHKVEMKYLAITVGVPVPSEGVIDIPVIERAvvgpqphfkmalsplfkvnedGDGVTRVRAHRQAHAAVTRYQVLDNTS-GCSLVELQPLTG------------------------------------------------------------
>UniRef50_UPI000185C39D(31-312:317) RNA pseudouridine synthase family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C39D  E=1e-21 s/c=0.37 id=33% cov=90%
---EEYIPFEPV---IVAGTDEFLVVDKPPFLPATP-NGRIVANTVQERLRRSLGESEIvaVHRldlltsgllll-----------SRNPATRARYQQLFQNQEITKEYECL---TVMPDDWHVgetrDVTLLLDPNPAGRGVKVVETDvsaraaaknpkfKLARTTVTFLGPVAADIGDVlassrgggsgggatsasiplhavgcgcghcgssmqvgywRLQPHTGRTHQLRVTMDWLGYPILGEDTYGreagaqgpsasAGSAPTYTPQLRLTATALAFVDPVTGERrayrsaRNIAAPAD-
>UniRef50_C1EHD0(185-468:481) RNA pseudouridylate synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1EHD0_9CHLO  E=2e-21 s/c=0.37 id=33% cov=85%
---------------VVHEDDAILVVNKPHRLPSmaHESNGVEHCAGCLERSLGLSPSTLRVtHRLDSSTSGVLVLGKTATAVREFNDSVAKtpgsKEIVKSYAALVYAKHAVPLGLMTHWMYPGPfgpgafhgrtlrRSRARLVRSSADGERGddtggqgtgkrwkrcelrvvscdratqsqvdtwRTLFdRELERARKpfdggaddplvsggdspggdspgaSVWAVRVELVTGRTHQVRAQLAAAGAPLLGDSLY-APMAGYLHDRdderaaeeawgrmergtvpdwpVALHAETLR------------------
>UniRef50_B8BW13(327-581:614) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BW13_THAPS  E=3e-21 s/c=0.41 id=26% cov=89%
--------------EILDQGENYVIASKPASVIVHhsswtgkrsdPKRRWKEATPMLQRVRdATGRRVNLVHRLDRGASGCLVfsFAQNEEndngetppcsVTKSMIEAMQHPDARKTYLALCDG-----DGTWN---GVDYLNKGWFTfnnpVKDEWGKlidDCCTDIRFVAskvlpptsdedpdnMEGRKVSLILARPKTGRWHQVRQHLSSgtIGHALLGDSTHGKSRTNRiwkkdrhlMKERTCLHLSRVQI--PATEYTpaIDISCPLP-
>UniRef50_B8BW13(24-258:614) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BW13_THAPS  E=2e-20 s/c=0.43 id=33% cov=64%
-------------------------------------------------------KVNLVHRLDRGASGCLLLAyadddgaevANASvsgSTAMLIDALASPESTKTYVALVRG-----EGILRE---EDFKTKGWFNVTRpikdESGeeKDATTWFnfvagqpETVEdgIERPRMSLVLARPMQGRWHQIRKHLNGISHPILGDTTHGastvnrewKEKRNLPGERICLHLARLQLP----------------
>UniRef50_C1MVV0(139-354:539) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVV0_9CHLO  E=5e-21 s/c=0.48 id=34% cov=75%
---------------VLTEDERVVIVDKPPGLPTLAGvgpgvAGENNAVAVLRRLRAsasasakrkreesddggggggggddDDAPLFAVNRIDKPVSGVWILAKgsrlSARARDALHKGAARGETRKTYVALvkgrvevGGGGAGGGGFVVDAPLRKDE--RGLAVVGGDGAKPAATRVVPLavvavpskggggEKEALTLAAVALE-KSGRYHQIRAHLAHVGHPIVFDRDY--------------------------------------
>UniRef50_D0N5S3(116-200:214) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0N5S3_PHYIN  E=2e-20 s/c=1.19 id=33% cov=39%
---------------VVYQDAQFVVLNKPHGLAVQDGSTLTESLALYLPWIAE-QQLRLVHRLDKETSGVLVLARSRLAAAKFSKLLRNGAVYKTYEALVE----------------------------------------------------------------------------------------------------------------------
>UniRef50_B8BXW5(127-398:438) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BXW5_THAPS  E=2e-20 s/c=0.37 id=29% cov=85%
-------PPE-----IIYSNNHLLVVNKPAGWKSQPGDGGGTGSmsnavdpkCLLTHLQNQSLGGGsqknfisPTHRLDQPCTGALIFAKNGKAASRVQVAWAKRNVKKCYWVVVEggigngggrtnglellqsrsmqlkqsglyqmsavlktgggkgrgtsgntGSNKPAGGG-SVTVSPVPPNLTSKDIgDVKHGRICHIEWKHLlalpssRNSPSNRHLLSVTTDTGAKHQIRA-MLALagGAPISGDLRYGNNVSNINQSGgrvsqplpdgsVALHARSV-------------------
>UniRef50_Q86K31(117-381:386) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q86K31_DICDI  E=3e-20 s/c=0.38 id=22% cov=90%
---------------IIFENQYFLVIDKPHGINV--GPIVDHLHNNFTSFVKDWLKKRNNnndnnlilynpHNLDSPTRGLFVIAKDFNFLSKFNKLLSDKKVSKKYKAFIPIKENEENIEIKPGIYKHfmeiTNHSPKKLFDEQNQdnslKECLLKVLKVERKEIYVPLglkdvsidllqddlqfddigkgdfrkqtkkllfnvVEIQLITGRTHQIRAQLSKLGFPLLSDIMYGGTslnhlitddndiknfESKYYPKMIGLVSFNLSFQCPITNENFNF------
>UniRef50_C8X3G8(89-261:285) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3G8_DESRD  E=4e-20 s/c=0.58 id=29% cov=61%
-------------------------------------------------------RPRLLNRLDYPTSGLVLVALSQGAFDQYQIWQDEGRVRKTYWAEIHGEWTGPEllkWRIETA------KRKRVAVVFEpDPDPLRwTHVRALYRIAPGRTRVEVVIAKGRRHHIRAHLAAAGTPIQGDSLYG---EDSPSAPLYLH-----------------------
>UniRef50_UPI0000E4872B(1-124:143) PREDICTED: hypothetical protein, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4872B  E=5e-20 s/c=0.80 id=31% cov=52%
---------------------------------------------------------------------------------------------------VRGHVTEDTMMIEKAIYPNPEEDLSHMMKVDDGEcptgtrllSALTRLEVLqrgEYDSEPATKLLLQLHTGRRHQLRIHCQSIGHPIVGDYTY-SMRKDVSPYRMMLLAHTLHI--PIPGEGIDVTA----
>UniRef50_C1MNL7(210-525:548) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MNL7_9CHLO  E=6e-20 s/c=0.31 id=30% cov=91%
---------------VVYEDEETLAVNKPHALPTqaHESNAAECVPGCVARALGftggvtDGDDALLVtHRLDASTSGVVVLGKTLGAVRAFNASIAgGKRVTKTYVALVENasNVRRRGVTVEdattppppVPLGRfvhymypgpfgasalggrgarrsnarllrrrapsasDGDAKPWRRcelVVRSCARASprdVAAWRALfaesvegnanweaargvddgsrdepsrRAGDDAVYEVEIELVTGRTHQVRAQLAALGFPILGDTLYapmagylhdegeGEGDLVDVDARethasellekgvvpdwpVALHAASLRWDD------KLFAAPPPW
>UniRef50_B8LCC0(40-253:332) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LCC0_THAPS  E=9e-19 s/c=0.45 id=33% cov=68%
-------------------------------------------------------KPYLVHRLDHRTSGAVIVGFDSKSAGVLHGRLRGGEARKLYVALVRGDLRErfrqaaADGCCDGGLSAILPERndveeaSKMKNVEKaqtyvaseyttkitvdlpinvkvDGvdveKDATTDFYFIAsmcldeddsgranddtakvpFTNKAVSLILCHPITGRTHQIRRHArKAFSSPVVGDREHGDSRVNRFwrekvgLDRLTLHCWYLDLP----------------
>UniRef50_Q9U190(1166-1406:1469) Possible RNA pseudouridylate synthase n=3 Tax=Leishmania RepID=Q9U190_LEIMA  E=2e-18 s/c=0.39 id=33% cov=66%
-------------------------------------------------------QQGLVNRVDVGTSGVVLVARTADAlHGAADAMIREHHMRKTYRALVQRWPPFsssssssastvrydddnaaaaplfsvspflspmPSAVVCAPvyaagatassISRRsalplSHGRQLQSPGQPSAdalaasragstlswsssvpvslsslehvhqqyatlhaalqdqRNAITRYRVLEYFASaGVAYVQVELCSGRRHQIRQHFAQLGFPLVGDARYhagvvaGHAGTTLGMRRAALHAY---------------------
>UniRef50_Q5A0Y2(11-221:247) Pseudouridylate synthase PUS5 n=4 Tax=Candida RepID=PUS5_CANAL   E=2e-18 s/c=0.45 id=27% cov=70%
------------------------VVNKPSGMVCDASHTNNIITALTNEFTKILPsvnssQFRLVQRLDRFVTGGLVVARNKKWADKVRKSfFQEGTLRltRRYVGLIAldQIPESTQGTIDFPIqalEKDYRGKNKSRELFTY--SAVTHYKLIPsarrtikgvfpvFQQGPILPIILELETGRKNQIRDHiIQKFGVPLLNDD----------------------------------------
>UniRef50_Q4Q7F2(1-387:453) Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4Q7F2_LEIMA  E=3e-18 s/c=0.24 id=40% cov=82%
----------------------MLVVNKPPGILmdgdeSIYGRTVESLVCEHMKARGIFDETHeqlqkekkrkkqlkFVHQLDFGTSGVLCLAFTKDMAARLAHCFEMRLVRKYYVALLHGHLPSDtalledaassdqpgsafssdtkarrasfaawanacnkawEGLgcvragcsasasggssansaggdevagfrhllqrpdktaweavglanskdaeegepvtvvhryrshrspasslitvapensapvpadavedliyrtllestttcsvvfVDLPVGYDLtdPEHLRMAVTAEQSRDAKTSLLVLKRtylaapppaggevpqrgaiakdspsvTSYPVTLVLLAPHTGRRHQLRVHCRAIGFPIVGDTSYcadlpwctalplGSSPStwvTAGARRMYLHAWRL-------------------
>UniRef50_Q9SVS0(216-415:472) RNA pseudourine synthase 6, chloroplastic n=8 Tax=Embryophyta RepID=PUS6_ARATH  E=1e-17 s/c=0.46 id=29% cov=70%
--------------------DSYVILDKPAG-TTVGGTTDNIEESCATFASRALDLPEPLkttHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPI--GIISHYM--RPKNMAPRLVAEDSIQgwhlcqlevleckkipwpDAATEkkhdiedcgWTSKEFAYECT----INLLTGKTHQIRAQLAACGAPLVGDSMY--------------------------------------
>UniRef50_Q1M2R1(1-176:186) Putative pseudouridine synthase (Fragment) n=1 Tax=Arcanobacterium pyogenes RepID=Q1M2R1_9ACTO  E=1e-17 s/c=0.52 id=32% cov=59%
----------------------------------------------------------------------------------YQDMFAARKVTKIYEAVARcvdlgalagnlpGVAKAEAGhlgewvRVDLRLAREP---GAIAVHVAEGEPnAVTYIRKVRqlratpelvpaaadgeaTAPPALALYELRPITGRLHQLRATLNYLGAPIAGDPLYPKvlslEDTAARSFPTQLLAAQLSFVDPVDGEQVHIR-----
>UniRef50_D0NFN0(180-287:335) RNA pseudouridylate synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NFN0_PHYIN  E=2e-17 s/c=0.84 id=37% cov=41%
------------------ETDELMVVDKPSGIPVHPT-GSFQLNSLTHMLIRDRREAlieetealklFPVHRLDRLTSGLLILAKSADKARSLTAELTAtsseggigsRSVQKYYVARVKGKFPDTE---------------------------------------------------------------------------------------------------------------
>UniRef50_B3S5A5(35-242:267) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S5A5_TRIAD  E=3e-17 s/c=0.44 id=28% cov=78%
---------------------NVIAINKPYGIASHDNPGIGYNCHSIYRELNLDDDSQPVylsHVLDRNCTGILIGSK----------------------AITVGIPKAIKGTIDIPIVEDKTLKRvklkmqdegasKQEIAYKYGgrvRLASTNYKVLSKSEIGCALIEFETKTYYKKQIRVHAAdALGCPVLGDHQYSSKKighnqvvspkigqalnligGNTNTLKMHLHLRKVTIsKWPASGKVINL------
>UniRef50_B5JQR9(19-208:270) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQR9_9BACT  E=4e-17 s/c=0.48 id=27% cov=80%
--------PEKFPL--IANDEGLFAINKPAGLASfqHEWSLGKPDISMALRreLLNEKPQLkklgiEGLYRaynLDSELSGALVFAKNEEFEKILKNAVGSSQLVFRFHLLVKAETEDREFVCDLPLM-NHHQAKRMIVSHRSGKKCETRFRFLRGFGQYQLW-EAETTSLRVHQVRVHAAERGLNIVGEDFYSDGEE---------------------------------
>UniRef50_A3BN26-2(136-317:400) Isoform 2 of RNA pseudourine synthase 6, chloroplastic n=2 Tax=Poaceae RepID=A3BN26-2  E=5e-17 s/c=0.49 id=27% cov=70%
--------------------DNYVVLDKPAA-TSVGGATDNIEESCVVFTSRALGLETPLmttHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTTAPVS--TGIITHYM--RPINRAPRLVSEDHIKG----WHVCQmeildckkvpwpsslirkvHKVDNCGWpqqeaaYECKinLLTGKTHQIRAQLAAIGTPIVGDSAY--------------------------------------
>UniRef50_Q7RGT9(524-591:1254) RNA pseudouridylate synthase, putative (Fragment) n=2 Tax=Plasmodium (Vinckeia) RepID=Q7RGT9_PLAYO  E=1e-16 s/c=1.30 id=32% cov=30%
---------------------------------------------------------------------------------------------------------------------------------------------IETYTKEFTLCNVKIHTGRTHQIRVHMRHIGHPLVSDKKYLNTSLSNLDKfwcfRMFLHSIILEFNNP--------------
>UniRef50_B7FTR4(233-445:497) Predicted protein n=2 Tax=Bacillariophyta RepID=B7FTR4_PHATR   E=1e-16 s/c=0.42 id=27% cov=76%
----------------LYEDTTFIVVDKPPLLPTQPDSSNYVEccpGCVQDNLgpftdiqGNEVVRPLLCHRVDSCVGGCVVLSKDGNGQKVFQEMQRERKLRKLYLAVTTQpvplgmhlhwmwAPQSARGKSGGPpcqLVSHAPpeSRRKARQFWNRCVLEVVKCEPIKigkedsHTYDPAGKVHyqstIRLVTGRKHQVRAQLASLGAPIIRDSLY--------------------------------------
>UniRef50_B8LDC7(264-596:686) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDC7_THAPS  E=2e-16 s/c=0.26 id=28% cov=88%
---------------IVARDDDagYLIINKPPSTPVHArvdnlvenvassvGRMFwmERRESILNQLHDDVDRAGeyddgqatkrkrrkqkieqLVYvatpqRLDQNTSGLLVVASKKSFASYFAKLLRTKTsgqlvtcriesksdanaeekyyrssscgVHKTYRCLVCVMPSKSSSADDTSIKsmkseveRLRKYSRERTVVRHFLEPSIrapkAFFSTVpkdvynpESWAECLLRitnvsdictvvgnkpsdelavslwgesgkpdecvavveLEVELLTGRTHQIRGQLAAEGFPLVGDAQYGGavpddcsvwkekckgrAESYLDSEQLALQCCSLEFLNPRY------------
>UniRef50_A8NRI8(176-361:422) RNA pseudouridylate synthase family protein n=1 Tax=Brugia malayi RepID=A8NRI8_BRUMA  E=3e-16 s/c=0.47 id=23% cov=73%
---------------IIYEDEELIAFNKPyqvacSNAPSNQAELLRILPQLSSRITPHMNCLRIVKSIGKSVTGVTLFAKNQNVQEKIKTLYENGLIEQCYRVITNMAPAHQEATINIPLMLPLSANSSNEITPFL--EASTYYRVLRHDPKNhTSYMECvvncdVPE-----QIRAHL-GIGiaCPIIGDIKY--------------------------------------
>UniRef50_UPI0001924EE0(43-146:153) PREDICTED: similar to predicted protein n=2 Tax=Eumetazoa RepID=UPI0001924EE0  E=4e-16 s/c=0.83 id=32% cov=42%
----------EPP--VIHEeiefiqnNEEVVVINKPASIPVHPcGRFRHNTIVFILGKDYGLYNLHTIHRIDRLTSGVLMFAKTSKKARELEGLVRGRLVIKEYLARVIG---------------------------------------------------------------------------------------------------------------------
>UniRef50_C4R5D7(6-231:249) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R5D7_PICPG  E=1e-15 s/c=0.38 id=21% cov=91%
-----------------FEGPGFLVINKPPGIYTQPpsfrQGNRDKSNELLPLLEKQLQtTLRQVQRLDYETTGGLVVSTNKYTARMFHRNMQalsnnildgrHRSsnkgyiLTKRYIALlnkpVTSIYEQLPKTSDGWRLLETQDIDESNSSSKLLLSKVRTIESCRPMHDKFPLM-FELITGRKHQIRRQIKQVfGTTIVNDVKYGAQlEFPQYHNQIALHSCFLSLK--VGLKKFQFDIPLEY
>UniRef50_Q6CQC4(34-228:299) Pseudouridylate synthase PUS5 n=1 Tax=Kluyveromyces lactis RepID=PUS5_KLULA  E=4e-15 s/c=0.43 id=31% cov=74%
----------EFPLKVqeLWRDKHHVIFNKPPLALSQlPDKrtwynTHDYDPPVLLDIVQsssgsilkdgtYEPSYYPIHRIDTPVSGGIVYAVNKQSAQQFSRNLRYGgnkgfSLTRKYVAKV-GKSKTanecKEGLIKW-----------------NG--AITYFQRVDNE-----HLILQLVTGKKHQIRkltqqV----LDSPIYNDLKYGGKKVFDSDFQIALHSAYIR------------------
>UniRef50_A4BBP0(93-269:270) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BBP0_9GAMM  E=8e-15 s/c=0.47 id=30% cov=60%
---------------------------------------------------------------DYQAAGVQVLAHSRKAASQLTEQFDpeglKGATLK-YRCDVEGDFN-DEGECTTDL--------------EDGAVS-TRFSKVRFdARPNRSVLEAELITGRDDQIRRQLSALRYPVVGDEDYGQNAEEQGLLR--LKCVEVRFTCPMTHETLVF------
>UniRef50_B3L2F7(376-656:795) Pseudouridylate synthase, putative n=2 Tax=Plasmodium (Plasmodium) RepID=B3L2F7_PLAKH  E=1e-14 s/c=0.29 id=32% cov=63%
------------------------------------------------------------HRLDKLTSGIVMFGKNKNFSTFFSQNISNNSIKKSYITRVEGdfrilirTLLDEKKVIDdmdnktlnelvedycsvgkddspLPLnggnsfkndiflhrnsyceegalsgqgdmdtlssiirekrnylldefdvekfelgceqrgndgdvsgghghcnrSGEEDNPLRQHFVVDFGymycenkkllkyvftkyseknrqiaeeyclKPSITRFMFLAYNPElNESLVLCQPITGRTHQIRAHLKSLSFPISNDPQYNDNFAKEYMDKsVYLH-----------------------
>UniRef50_B8J2T9(245-407:493) Pseudouridine synthase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J2T9_DESDA  E=2e-14 s/c=0.50 id=31% cov=56%
-------------------------------------------------------------RLDFGTSGLLCAALSTSAAEDFRAAEAAGLCEKRYVALLSGVL---SGPVVARQELDVSKRRKSRVLPALAHHTRwTEFWPLHvwrpgdvsvqalqallgpagggapendapvvtpeagglpVPAAGLTLAACRIRRGARHQIRAHAAGLGHPLWGDSLYAEPEE---------------------------------
>UniRef50_Q3KZ50(119-219:230) SJCHGC01105 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q3KZ50_SCHJA  E=3e-14 s/c=0.80 id=30% cov=41%
-------------LRVVHEEQGFVVINKHPELLINCTNPWVNCLTLQMQLFYNRPQyvnwklknmFHFVHRLDCPTSGLICIAYDTKVASMIRRAFEKREVTKYYLAIVRG---------------------------------------------------------------------------------------------------------------------
>UniRef50_Q4D992(314-390:682) Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi RepID=Q4D992_TRYCR  E=4e-06 s/c=0.70 id=38% cov=23%
-------------------------------------------------------KVFVVHRLDAATSGVLLFGLDSRSARMTAELMAQKGVpddkdafmpvagcTKQYIARVHGRF-------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI000155BA23(37-120:152) PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BA23  E=8e-13 s/c=0.90 id=33% cov=30%
-----------------------------------------------------WFRSRFCHQLDFSTSGALCVALNRAAAGRAYRCFKERIVTKAYVALVRGHVGEDRMTINHAIGKN-----------------------------------------------------------------------------------------------------
>UniRef50_D2VUY3(6-129:133) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VUY3_NAEGR   E=1e-12 s/c=0.61 id=29% cov=28%
-------------------------------------------------------DLFPLHRIDRLTSGVLILGKSSEVARDFSASLKSKQVGKQYIAVAEGIcPTEGLFKVDYPLM-------------------------------------------------------------------------------------------------------
>UniRef50_Q4DAY9(171-490:665) Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DAY9_TRYCR  E=2e-11 s/c=0.22 id=31% cov=72%
----------------------LLVIHKPAGVPTHAGGRYFMNSCTAMleyvlapkRLRAWLLQrdpmlqsivstryltetecqellayymvkdegsmaeyvsierlPRPCYRLDKVTSGVLLLGVSQAATRRVGEALtrktkqmeevflwklrliasddkkttrvggvhsiEERTlrefnvgVRKRYLARVHGYFPNDashalhSCRVRKENAGDGDHRTTEKVffitiptnptirrcdavkeealgvvgppvllasrlmqfkfrdgdtteeppaRDQEGKqqrepfyqDAATFCQPLRYFtsgsgqaSEGESLVHCVPFSGRMHQIRMHLSDWGHPIIGD-----------------------------------------
>UniRef50_Q5BWK5(29-121:184) SJCHGC03415 protein (Fragment) n=2 Tax=Schistosoma japonicum RepID=Q5BWK5_SCHJA  E=3e-11 s/c=0.76 id=39% cov=32%
------------------------------------------------------------------------------------------------------------------------------------RESLTTIIVLGYGklmGEPATRVLLIPKTGRRHQLRVHCAvGLGHPIAGDITYvrrpfdhpnityihdiyamHDVNLDYKLKHMMLHAYSMKI-----------------
>UniRef50_B4U4Q4(90-214:266) Pseudouridine synthase n=15 Tax=Lactobacillales RepID=B4U4Q4_STREM   E=4e-11 s/c=0.56 id=29% cov=55%
-------------------------LNKPRGVISSVSD-DKGRQTVIDLLPQVKERIYPVGRLDWDTSGLLILTndgdfTDKMIHPR-------NEIDKVYLARVKGVVTKESLR---PLTR------GVVIDGKKTKPA--RYRIIRVEPDkNRSIVELTIHEGRHHQ--------------------------------------------------------
>UniRef50_B5JTN5(130-249:256) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTN5_9GAMM  E=6e-11 s/c=0.58 id=26% cov=55%
--------------------------------------------------------------------GIVLVAHNRRAAADLSALEEAGKITRHYRLEVLGE-TPPSGSIN-------EHSEYRRIDYLTALNA----SVLAVQSTRGTEDPLRER----------LAAMGHPVLGDDVYGRQDYRDH---LHLKGVGLAFTCPFSGESVHF------
>UniRef50_B3GZS7(37-191:232) Pseudouridine synthase n=10 Tax=Pasteurellaceae RepID=B3GZS7_ACTP7   E=8e-11 s/c=0.45 id=26% cov=67%
-----------------FEDTVVVLFNKPFDVLTQ------FTDEQGRQTLKDFipiPQIYPVGRLDRDSEGLLLLTNNGEIQHRLANpKFEK---QKTYLAQVEGIPqaadlAKLEKGVELKDGLTKPAKAK-AISAPNYEW-QTAPKIRERKTIPTSWIELKIHEGKNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_D2B9T7(439-584:621) Pseudouridine synthase n=18 Tax=Actinobacteria (class) RepID=D2B9T7_STRRD  E=4e-10 s/c=0.46 id=27% cov=64%
--------PTMPDL--VY-----LAINKPIGVVSTMSD-PDGRPSLADFVADRTERLFHVGRLDTETEGLILltndgeLA-NRLTHPSYG-------VQKKYWAKVPGR-----------IERDLGRRLKKGIELEDG-IAKADSFTLVQEHGQQALVEVVLHEGRKHIVRRMLEEVGHPVI-------------------------------------------
>UniRef50_Q042N1(65-203:245) Pseudouridine synthase n=3 Tax=Lactobacillus gasseri RepID=Q042N1_LACGA  E=5e-10 s/c=0.48 id=24% cov=62%
--------------KIAYQQYHYFLLNKPKGVISATEDRSQQTVISLLKTKDRYQGIAPVGRLDKDTTGLLLLT-NDGALAH--ELLApNKHVAKVYRAKIAGVPDPET-----------AKKFAQGLILGDGtklKPAKL--KILKQDQDnNLSQIEIQIQEGKYHQI-------------------------------------------------------
>UniRef50_Q47QM5(199-337:375) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=Q47QM5_THEFY   E=8e-10 s/c=0.47 id=27% cov=60%
------------------------ALNKPRGVVSTmfdPEGRPTIGD-YAAQIGPIEERLFHVGRLDTDTEGLILLTndgelANRLTHPRY-------KVTKTYLAKVPG-----------PVPRDVIRQIRKGVELDDGFVKVDSFRVIDNI-EPKALVEIRLHEGRKHIVRRLMKAVGHPV--------------------------------------------
>UniRef50_B8LBG7(230-481:536) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBG7_THAPS  E=1e-09 s/c=0.26 id=23% cov=79%
----------------VYVDDDLgfTVLNKPGGIPTH-STISNHAEDVVSMYRASLKEERGdeAH-----TphvSipirmepemyGLTLASTKKEFCAYITKQLAASKelhdenssngnsipVKKSYRVLVCIKNPDDIDRIEKMVGKtlehyvDPVSPTPKKFVRNKPKSSNhdwqqclmlitsvgdTKFRAACVSSKYTdsndftlahrlwcpdmdhpaedlgvsyvMQLELELLTAKPHQIRGQLAALGCPIVGDTPYGGGTCEMRMHRHM-------------------------
>UniRef50_C2D7I2(83-259:285) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7I2_9ACTN  E=1e-09 s/c=0.37 id=24% cov=66%
-------------------NDHVyLLLNKPSQVLTTMSDPFGFPCVASLVPCDDYPGLFPVGRLDSDTTGVLLFTTNGNMGNRLLHP--SHHVWKTYVALIEGKLTSSQ-----------MQKLSQGIMLEDGMTSPCFIRTITqdepcthldknhslfddmRLNAASSLCELKIHEGRNHQVKRMLQEIGHPVI-------------------------------------------
>UniRef50_P35159(65-199:244) Ribosomal large subunit pseudouridine synthase B n=200 Tax=Bacteria RepID=RLUB_BACSU  E=2e-09 s/c=0.48 id=29% cov=58%
---------------------------KPRGVIS--AAQDDKGRKVVTDFFKNIPQrIYPIGRLDYDTSGLLLltndgeFA-NKLMHPKY-------EIDKTYVAKVKGIPPKE-----------LLRKLERGIRLEEGKTAPAKAKLLSLdKKKQTSIIQLTIHEGRNRQVRRMFEAIGH----------------------------------------------
>UniRef50_B6KCA6(30-122:231) Putative uncharacterized protein n=3 Tax=Toxoplasma gondii RepID=B6KCA6_TOXGO  E=4e-09 s/c=0.68 id=34% cov=24%
--------------------------------------------------------------------------------------------------------------------------------------------------------------------RLHAASLGHSVIGDPTYGPEVHRRRHHRcdkpLMLHCWILKIAPPYAQEEVCVEAP---
>UniRef50_C0W3E8(133-287:325) Pseudouridine synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3E8_9ACTO  E=1e-08 s/c=0.40 id=30% cov=65%
-------------------DPDVItvLLHKPAGVVTTmedPQGRPTVADLAeqfisEHRTELEHPEsVRLVHvgRLDTETEGLLLLSNDgDLAHRLMHPSF---EISKTYVAIVEGQV---EGWV--------PRKLRRGIELDDG-LAQADRVVVKDAGPSGSIVEITLHSGKNRIVRRMLDAVGHPV--------------------------------------------
>UniRef50_Q15Q67(70-211:241) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q15Q67_PSEA6   E=1e-08 s/c=0.44 id=34% cov=61%
--------------------DGILVmLNKPLGyVCSHDNNeGMRIYDLLPERWEFRNPKIVSVGRLDKDTSGLILV--TDDT--KLVHQLTspKHHVDKVY-----------QVSVDCPLQSDIIDSFAKGVVLGEGAeqclPAK-----IEIVSENVANVTLNE--GKYHQVRRMFAACGYHV--------------------------------------------
>UniRef50_Q3EJL5(1-49:64) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Bacillus thuringiensis serovar israelensis ATCC 35646 RepID=Q3EJL5_BACTI  E=2e-08 s/c=1.26 id=25% cov=22%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------MSHNGNPLVGDVLYGGQTKYMSS--QALHAMKINFLHPITKEAIEVDVP---
>UniRef50_Q65HX7(65-199:244) Pseudouridine synthase n=5 Tax=Firmicutes RepID=Q65HX7_BACLD   E=4e-08 s/c=0.45 id=29% cov=46%
-------------------------------------------------------RIYPIGRLDYDTSGLLLltndgdFA-NKLMHPKY-------EINKTYVAKLKGIPLKE-----------NLKKLERGVRLEDGKTAPAKVKLLSLDKKKqTSIVQITIHEGRNRQVRRMFEAIGH----------------------------------------------
>UniRef50_B2V6W2(54-204:244) Pseudouridine synthase n=5 Tax=Bacteria RepID=B2V6W2_SULSY   E=4e-08 s/c=0.40 id=27% cov=66%
--------------EILYKENHYFMLNKPAGYIT--ATEDEEYPTVLD-LFSDLPiasKLFPVGRLDIDTEGLLILTTDGQFGHRLSHP--KWNIEKEYYAIVEGDISN----------IDFSESENKGIYLKKEKY-QTkpfKVKVLNTSKDK-SEILITLTEGKYH-IvkRI-MQELGYPVL-------------------------------------------
>UniRef50_Q1J642(66-191:244) Pseudouridine synthase n=51 Tax=Streptococcus RepID=Q1J642_STRPF   E=5e-08 s/c=0.48 id=27% cov=56%
-------------------------LNKPSGYVS--ATQDRQQATVMELLDdtARQKTVFPVGRLDKDTRGLLLLTNNgQLAHDLLSP---KKHVTKEYLAKVAGIMTEAD--------KDYFARGISLKDHQC-LPA--HLEVLASDlQQQTSLVKITIQEGKFHQ--------------------------------------------------------
>UniRef50_C6UMY1(13-183:235) Putative pseudouridine synthase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMY1_HODCD  E=5e-08 s/c=0.35 id=31% cov=73%
----------------LYEDEQLVVVVKTKRLLACP--VANGGASVVHALAACHAptSLTPAHRLDVGTFGVLAVRKTQARRAHAQRQLSWRRALKMYahLAsAIEAAASPASFCV-ASLA-------------------------LAVGCNSVLAVVTRLVLGRTHQIR---ASQRR-VWGDVTYATrcllfgafRATHSALKRQSLSACTLQVGHPV-------------
>UniRef50_A5KLG0(67-215:261) Pseudouridine synthase n=8 Tax=Bacteria RepID=A5KLG0_9FIRM   E=7e-08 s/c=0.40 id=25% cov=60%
-------------------------LNKPAGVVS--ATEDKKERTVIDLIKEsKRKDLFPAGRLDKDTEGLLLITNDgQLAHRLLSP---KKHVDKIYYAKIKGIVTEEDVRLfekgvhigdEKPtmpaaleILSVQKERRKEKIKEQKILP-ETKNETDE-KEDGYSEIYLTIKEGRFHQ--------------------------------------------------------
>UniRef50_B7PR12(1520-1577:1577) Zinc finger protein, putative n=1 Tax=Ixodes scapularis RepID=B7PR12_IXOSC  E=7e-08 s/c=1.03 id=34% cov=21%
------------------------------------------------------------HRLDRLTSGVLLMGRSVERARQLENEMKGRQVSKEYLCRVEGCFPE-----------------------------------------------------------------------------------------------------------------
>UniRef50_C5WHE9(66-147:245) Pseudouridine synthase n=3 Tax=Lactobacillales RepID=C5WHE9_STRDG   E=1e-07 s/c=0.72 id=27% cov=37%
------------------------ILNKPAGFLSaTKDRAQATVIDLLDETARQ-KDVFPVGRLDKDTRGLLLLTNNgQLAHDLLSP---KKHVTKEYLAKVAGIMTDAD---------------------------------------------------------------------------------------------------------------
>UniRef50_C3YVI6(172-271:418) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YVI6_BRAFL  E=1e-07 s/c=0.59 id=28% cov=43%
---------------IVYDDGHIVAINKLAGLPVQGQTPEQLSiNSLLPELGAalEASDLSIVKPLDWHLSGIVLLARTPEARAEVfnvtKAARQRDKFYRKYWGVVIGNLDPSE---------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001699AB8(13-64:67) hypothetical protein Epers_21574 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AB8  E=2e-07 s/c=1.12 id=25% cov=24%
--------------------------------------------------------------------GCLLLSKRRSALRSLHELMQKNLVDKRYLALLAGSWRKGRQEVDAPLAEEHP---------------------------------------------------------------------------------------------------
>UniRef50_C5KUW6(3-171:182) Ribosomal large subunit pseudouridine synthase B, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUW6_9ALVE  E=2e-07 s/c=0.34 id=26% cov=69%
-----------PSLDIdqclsdgsIHASPCLFAFFKPRGM--------ETTCTAGSGLRKflDRGRLHPVGRLDRDTTGLLLLSSDgDCTNRILHS-----TINKTYAALVRGVLPEglmkkvvSEG-VDLPDGHVDVTRLETINDGDTVPFGLVAYPLSSIPTNGCSMVRITTTCGRNRVVRRTLCALGHPVL-------------------------------------------
>UniRef50_Q9CKK7(51-200:241) Ribosomal large subunit pseudouridine synthase E n=61 Tax=Bacteria RepID=RLUE_PASMU  E=2e-07 s/c=0.39 id=25% cov=49%
------------------------------------------------------PHVYPAGRLDRDSEGLVLLTNNGEIQHRL--AVPKFNTEKTYFAQVEGIPQETD-----------LAQLRQGVVLNDGKtlPAKVRlvpepnwlWQrnppIRERKQIPTSWLEIKIHEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_C8WBY9(336-472:509) Pseudouridine synthase n=3 Tax=Zymomonas mobilis RepID=C8WBY9_ZYMMN   E=3e-07 s/c=0.42 id=25% cov=56%
--------------------------HKATGLLTT-ERDPEGRKTIYDRLPADLPRVMPVGRLDMNTEGLLLLTTDGGFKRML-ELPATH-IERCYRARVFGDVSQDQleeliegvtidgihyGSIDANLERRTGRNGWVEMKLHEGRNREVR-RVLGYLGLQVSRL-------------------------------------------------------------------
>UniRef50_C8NA36(1-63:80) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA36_9GAMM  E=3e-07 s/c=0.91 id=42% cov=24%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------MAAQHYPLVGDPLYGlatpsgkglPPEVRQTLlafPRQALHATALTLSHPADDDEITFASPLP-
>UniRef50_O67444(45-190:249) Uncharacterized RNA pseudouridine synthase aq_1464 n=4 Tax=Bacteria RepID=Y1464_AQUAE  E=4e-07 s/c=0.39 id=28% cov=56%
-----------------------IILNKPCCYLTQLGRSPDGRKTIEELIKDIPERVFPVGRLDYNTEGLLILTNDgELANRILHPRYK---LPKVYLALVEGKVDQK-----------TLKRMKQGIELEDGfaKPD--NIRIVRYEGKNT-LLEITFHEGRKH---------------------------------------------------------
>UniRef50_C4FUC8(61-145:243) Pseudouridine synthase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUC8_9FIRM  E=4e-07 s/c=0.67 id=29% cov=35%
---------------------HYYLLNKPEGILS--ATEDRHHQTVIDWLGEGYQHldLFPVGRLDIDTTGLLLLTNNgQLAHQLLSP---KKKVDKTYTATIRG---------------------------------------------------------------------------------------------------------------------
>UniRef50_P72581(42-191:261) Uncharacterized RNA pseudouridine synthase slr0612 n=16 Tax=Bacteria RepID=Y612_SYNY3  E=4e-07 s/c=0.38 id=26% cov=63%
-----------------------IVFYKPYGVLCQFTDNSAHpRPTLKDYI--NLPDLYPVGRLDQDSEGLLLLTSNGKLQHRLaHREFAH---QRTYFAQVEGSPTDED--------LEPLRRGITFADYPT-RPAIAKIITepdfpprnppIRYRASiPTSWLSITLTEGRNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q38VQ0(53-188:239) Pseudouridine synthase n=6 Tax=Lactobacillus RepID=Q38VQ0_LACSS   E=4e-07 s/c=0.42 id=21% cov=62%
--------------PIRYQTNFYWLLNKPAGVISATTDPQKTVMDLFAP-ADYREDLFPVGRLDKDTTGLLLITNDgDLAHDLLSP---KKHVAKTYRAKIAGVVTAADQ---AQFAAGLKLR------DFDAQPAQLTILRTDTARQE-SLIEVEIHEGKFHQ--------------------------------------------------------
>UniRef50_A8SYF2(65-190:239) Pseudouridine synthase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SYF2_9FIRM  E=4e-07 s/c=0.45 id=24% cov=55%
-------------------------LNKPAGCVSA-TKDNVHQTVIDLLNGENTKDLFPVGRLDLDTEGLLIITNDgRLAHHLLSPA---HHIAKTYYADIDGYV--DDQTISLfkqgiDIGDDTPTLPASLKIIEADR------------STGSSRIELTITEGRFHQ--------------------------------------------------------
>UniRef50_C7GZ55(62-205:250) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ55_9FIRM  E=5e-07 s/c=0.39 id=24% cov=62%
-----------------------IAMNKPCGyVCTVSDELGRR--TVYDLLTDIDERLFTIGRLDKDSEGLILLTNDgDLAQKLLSP---KRKIEKNYEVVVRGVPgandiKKLSGgiTIDVEISQTKQNKPVKSIVKYHTKPAK-IFEIGQKQGDMKLSMIIKE--GKKRQIR------------------------------------------------------
>UniRef50_Q0AX41(52-196:239) Pseudouridine synthase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX41_SYNWW  E=6e-07 s/c=0.39 id=24% cov=65%
--------------KIIEQTDKIyLLLHKPAGYIS-SLADPQGRPRVIDLLSAVNTRVFPVGRLDYDTEGLLLLS-ND---GEFSNLMTHPRylIPKKYEAWVQGLVKP-----------DTIRQLEQGVALEDGITAPARVRLLS-SKKGQSLLELEIHEGKKRQIKRMCLAVGH----------------------------------------------
>UniRef50_A9KNY1(72-192:240) Pseudouridine synthase n=3 Tax=Firmicutes RepID=A9KNY1_CLOPH   E=9e-07 s/c=0.46 id=26% cov=32%
-------------------------LNKPAGVVS--ASNDKKQTTVVDLIdEAKRKDLFPVGRLDKDTEGLLIITNDgDLAHQLLSP---KKHVDKVYFA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q7VBH8(65-204:237) Pseudouridine synthase n=1 Tax=Prochlorococcus marinus RepID=Q7VBH8_PROMA  E=1e-06 s/c=0.40 id=24% cov=64%
----------------------VILLNKPTGVIST-CRDTHGRKTVLDLLPDNLQKgMHPVGRLDKDSRGALIISNNGLLTLHLTHPRFNH--KKRYSVLITGVPSKNT-------LKKWRNGIE--IDKKTTRKAL--VNIVKRQGNNT-LLEIVLFEGRNRQIRKVADKLGHPVI-------------------------------------------
>UniRef50_B3E7C4(64-199:274) Pseudouridine synthase n=6 Tax=Desulfuromonadales RepID=B3E7C4_GEOLS  E=2e-06 s/c=0.40 id=21% cov=62%
---------------------YYVLLHKPAGYVT--SLKDPQGRQLVTELVKDVGeRLFPVGRLDYNSEGLLLLTNDGAWANRLMHP--RHQVDKEYHVRVRGKIDPQQ-----------IKKLADGVELEDGPTGATTVRLLKNDQSND-WLSVTIREGRNRQVRRMCAAVG-----------------------------------------------
>UniRef50_A7VSS7(71-193:256) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A7VSS7_9CLOT   E=3e-06 s/c=0.44 id=26% cov=33%
--------------------------NKPAGVVS--ASRDSREKTVVDLVppVLSRRDLFPAGRLDRDTTGLLILTDDgELAHRMLSP---KKHVYKLYEASVDG---------------------------------------------------------------------------------------------------------------------
>UniRef50_C7H4Z6(61-187:235) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z6_9FIRM  E=3e-06 s/c=0.43 id=29% cov=55%
-----------------------LMLNKPEGVVS--ASTDKRDTTVVDLIGDAYPRreLFPVGRLDK-TStGFVLL--TDdggFAHEILAP---KRHVSKTYTVV-----------IDTPLTEEMRRGFAEGVTLADG-TALSPAEVEALTPDGLT-VKVRLRQGVYHQI-------------------------------------------------------
>UniRef50_Q11WC7(32-175:224) Pseudouridine synthase n=2 Tax=Sphingobacteriales RepID=Q11WC7_CYTH3  E=3e-06 s/c=0.38 id=19% cov=63%
------------------------IINKPFNMVSQ--FISSDAVNLLGNLDFTFPEGtHAVGRLDNESEGLLILTTNKKVTRLLFQGTKKHT--RTYLVLVKNKVSEEtlkqlqTGIsIRVKGGGNYISSPCEASIVTDAK-AIYSYAADTRENYPHTWLLLTLTEGKFHQVR------------------------------------------------------
>UniRef50_C9KIR7(67-208:250) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIR7_9FIRM  E=3e-06 s/c=0.38 id=25% cov=62%
-----------------------LLLNKPKGYLST-AKDDRGRRTVLDLLPEVRERVYPVGRLDNNTEGLLLIT-NDGAL--MNGLLHPRfEVEKTYHAGVTGKLTEEK----LQMLRDGL-------LLEDGMTAPAKVSLLpEREPGervrGLTRAAITIHEGRNRQVRRMFAAVGC----------------------------------------------
>UniRef50_C0FY58(91-211:261) Pseudouridine synthase n=3 Tax=Clostridiales RepID=C0FY58_9FIRM   E=4e-06 s/c=0.44 id=22% cov=43%
-------------------------------------------------------DLFPVGRLDIDTEGLLLITNDgALAHDLLSPA---KHVEKTYYAVIDGVVTEK----DVNSFENGVDIGEEKLTKP-GKL-----RILKSEPE--SEIELTITEGRFHQ--------------------------------------------------------
>UniRef50_A5IKF7(61-197:239) Pseudouridine synthase n=5 Tax=Thermotogaceae RepID=A5IKF7_THEP1   E=5e-06 s/c=0.39 id=24% cov=55%
-----------------------ILFHKPSGYVT--STKDPHSETIM-EFLPPLKGIFPVGRLDKDAEGLLIITSDgDFAHRVISPKW---SVEKEYIVKVEGEVTE-----------DKIEKLKNGVTLRDGFFAKA--KCVEKLSNDTLKIVITE--GKYHQI-------------------------------------------------------
>UniRef50_C4Z9Y4(77-198:250) Pseudouridine synthase n=16 Tax=Bacteria RepID=C4Z9Y4_EUBR3   E=5e-06 s/c=0.44 id=29% cov=34%
--------------------------NKPSGCVS--ATCDNVHDTVMDYItDAVHDDLFPVGRLDIDTEGLLLIT-NDGALSH--ELLSpSKHVAKTYYARIDGEVT------------------------------------------------------------------------------------------------------------------
>UniRef50_C2KV26(47-189:239) Pseudouridylate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KV26_9FIRM  E=6e-06 s/c=0.37 id=28% cov=58%
--------------EIVYKDEpihyeefsyYMM--NKPVGVLS--STEDRKQKTVLDLFSdKHRKDLFPVGRLDKDSEGLLLImndgAL---AHKLLSPKMH---IEKKYLVEIPGKISEEE-----------LDRLRQGIQYDTdliAMPAKA--RCLSSTEEG-SRVEVIIMEGKFHQI-------------------------------------------------------
>UniRef50_B9KC52(61-190:240) Pseudouridine synthase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC52_THENN  E=1e-05 s/c=0.40 id=26% cov=59%
-----------------------ILFYKPAGYVT--STRDPHSETIM-EFLPDIKGIFPVGRLDKDAEGLLLVTNDgEFAHRVISPRWK---VEKEYVVKVEGEITE-----------DKLEKLRRGVSLRDGFFAKAKH--VEKISNDTVKIVITE--GKYHQVKRMMAAVG-----------------------------------------------
>UniRef50_Q5ZXB8(26-174:222) Pseudouridine synthase n=2 Tax=Legionella pneumophila RepID=Q5ZXB8_LEGPH  E=1e-05 s/c=0.35 id=27% cov=64%
----------------------LILFNKPYGILTQfTGELPEQTLSAFIKL----PGFYAAGRLDKQSEGLLILTDDGKLQHRLTHpKFEKK---KHYWVQVEGVPTDKDlqplrkGLV----IKDITFLPAEARLISEPKiwPRIPPIR--ERKHIPTTWLEIILREGKNHQIRKMTAAIGFP---------------------------------------------
>UniRef50_C1XV14(61-143:369) Pseudouridine synthase n=2 Tax=Meiothermus RepID=C1XV14_9DEIN   E=1e-05 s/c=0.63 id=22% cov=23%
----------------------VIALHKPVGVTT--TKSDPHAERTVYQLVPDVPGLHPVGRLDKDSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C8NZC3(70-207:246) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZC3_ERYRH  E=1e-05 s/c=0.38 id=23% cov=60%
------------------------ILNKPRGIVS-SANDDKDRESVVDLVPNDI-RVFPVGRLDRETTGALILTNDGDFAYYMTHP--KFDLSKIYRVSVRGRLsyevtnSLKEGiTIE---GVEYKGVEISRVKYDAAKD-KTQFSITLHEGKNR-------------QIRKIFAHFGLPVL-------------------------------------------
>UniRef50_Q3AVD5(68-204:247) Pseudouridine synthase n=3 Tax=Cyanobacteria RepID=Q3AVD5_SYNS9   E=2e-05 s/c=0.38 id=23% cov=60%
-------------------------LNKPVGVIC-SCRDPQGRATVLDCLpHQERSGLHPVGRLDADSRGALLLTdqgeLTlRLTHPRYNHA-------KTYRVLVRGIPSSQA-------LRRWRDGLL--LDGRLTRPARVHC---LRSRGASSLLEVELKEGRNRQIRRVAELLGHPVI-------------------------------------------
>UniRef50_A3ZQL4(81-212:517) Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQL4_9PLAN  E=2e-05 s/c=0.39 id=27% cov=57%
-------------------------LNKPPGVLS--TNFDPAGRTRVIDMVPQDVRLFTIGRLDRASEGLIVVtndgelA-NRLAHPRY-------EIEKTYRVEVAGHPEP-----------DAITFVRRGVHLAEGfvQPVS---VVMKRKNKQSTTLEVILDEGKNREIRRLMAKIGH----------------------------------------------
>UniRef50_A4J9G8(68-151:249) Pseudouridine synthase n=47 Tax=Bacteria RepID=A4J9G8_DESRM   E=2e-05 s/c=0.62 id=28% cov=23%
--------------------------------------------------------PFPVGRLDKDTEGLLLLTNNgKLAHQLLSP---KKHVPKTYYALVQGLVTEED---------------------------------------------------------------------------------------------------------------
>UniRef50_B7G6C8(2-50:151) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G6C8_PHATR  E=2e-05 s/c=1.05 id=35% cov=22%
---------------------------------------------------------HPVGRLDYDTSGLLLFSSSgALTQRLLHP---KHEVEKEYVAVVTGIVVEDE---------------------------------------------------------------------------------------------------------------
>UniRef50_C6VP86(64-191:246) Pseudouridine synthase n=4 Tax=Lactobacillaceae RepID=C6VP86_LACPJ   E=2e-05 s/c=0.40 id=23% cov=37%
------------------------VMNKPVGVITATTDSAAKTVMDLFNTTDFRDDLFPVGRLDKDTEGILVIT-NDGALSH--DLLSpNHHVTKVYEAEVTGEITAAQ---------------------------------------------------------------------------------------------------------------
>UniRef50_C6AV89(86-221:268) Pseudouridine synthase n=17 Tax=Rhizobiaceae RepID=C6AV89_RHILS   E=2e-05 s/c=0.38 id=23% cov=61%
-----------------------LMLNKPRGLVTTR-HDPEGRPTVYDCLRdFDIPHLSPVGRLDKASEGLLLFTNDTEFAQILLDPVTH--VTKTYH-------------VQIDRIMDDEDIAAMTagIRHDGELLTATAARRL-RQGDRNSWIEVELDEGRNRQIRRMLEALG-----------------------------------------------
>UniRef50_D0IWI1(43-192:223) Pseudouridine synthase n=2 Tax=Comamonas testosteroni RepID=D0IWI1_COMTE  E=2e-05 s/c=0.34 id=29% cov=60%
----------------------LLCFHKPYGVLSQftPeGKWQGLKDWI------DVPGVYVAGRLDADSEGLLLLTNDGQLQARIADP--RHKMEKTYWVQVEGIPDEA-----------ALQRLREGVELSDGKtlPAKARliepqplmwprnppIRVRQNIPD--CWIELIIREGRNRQVRRMTAAVGHP---------------------------------------------
>UniRef50_Q24V73(81-217:257) Pseudouridine synthase n=3 Tax=Bacteria RepID=Q24V73_DESHY   E=2e-05 s/c=0.38 id=27% cov=49%
-------------------------------------------------------RVYPVGRLDYDTSGLLLLTNDgDLAHRLMHPSY---GVEKTYRVEV-GEKIPEQAL----------KRLEKGVLLEDGKTAPARIREVSPKGRGSLpTYEITIHEGRNRQVRRMFKAVGFPL--------------------------------------------
>UniRef50_B2UKZ1(57-200:230) Pseudouridine synthase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKZ1_AKKM8  E=3e-05 s/c=0.35 id=23% cov=65%
-------------------DGLYAALYKPEGYTcSHdDGEGNLIYDLLPFQWRHRNPAVSSVGRLDKETSGLLLLTDDGKFIHRMTSP--RHHVAKVYEAVTEEDIPTEA--VELFASGTLTLNGETRPCAPA---------LLEIREPRRALLTLTE--GKYHQVRRMLAAVGAPVL-------------------------------------------
>UniRef50_A9NGL0(65-215:238) rRNA pseudouridylate synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGL0_ACHLI  E=3e-05 s/c=0.34 id=22% cov=60%
-------------------------LNKPTGYLSTTADIHKRRNILDLILKEDqNVRLFPIHKLEYDTSGLLLVTNDGELTKKLTSQSE--SIQKEYVIRTKGIMIKERIReikrgikvenkiikpVDIAIVeldkAHQSTLVKMIITNESAKELKTMFKQLGHEVKNMTRIRFDSLT-------------------------------------------------------------
>UniRef50_B7A9J5(74-193:245) Pseudouridine synthase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9J5_THEAQ  E=4e-05 s/c=0.42 id=22% cov=52%
-----------------------LLLHKPAGYVT-----SRKEGPSVYALLEGFPtrDLSPVGRLDKDTEGLLLFTTDGELLHRLTHP--RHKVEKRYLvhllhpATAADVRAFQEGIL---------------LSGEKTLPARLH------LGEDPTWVELTLLEGRFHQ--------------------------------------------------------
>UniRef50_Q1GHH2(8-157:221) Pseudouridine synthase n=12 Tax=Bacteria RepID=Q1GHH2_SILST   E=4e-05 s/c=0.33 id=27% cov=53%
----------------------------------------------------DCPGVYPAGRLDRDSEGLMLLTDNGRLQAWISDP--KHKLEKTYWVQVEGIPTEDalkalRQGVDL---KDGMTRPAKAELISE--PAQLWARtppIRERKSVPTAWLELKISEGKNRQVRRMTAAMGYP---------------------------------------------
>UniRef50_B8BQ39(161-248:370) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ39_THAPS  E=5e-05 s/c=0.57 id=37% cov=22%
---------------------------------------------------------HPVGRLDYDTTGLILFSSDgKLTQRLLHP---RRGVEKEYVATVQGEVNASE---------------------------------------------------------------------------------------------------------------
>UniRef50_A2RP35(151-230:328) Pseudouridine synthase n=172 Tax=Firmicutes RepID=A2RP35_LACLM   E=5e-05 s/c=0.63 id=26% cov=37%
-------------------------LNKPQGVVSA-TKDNVFKTVVQLLSEKDFrKDIFPVGRLDKNTEGLLILT-NDGALGHDLTQPKKH-VEKEYFARIDGKVTDE----------------------------------------------------------------------------------------------------------------
>UniRef50_C0EB54(61-199:248) Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT  E=6e-05 s/c=0.36 id=23% cov=62%
--------------------EHLyLMLNKPQGVVSATDDKVHRTVLDLVPPELRRRGLFPAGRLDRDTVGFVLITDDgEFAHNILSP---RHHVPKTYEA-----------GLDGPIGENELSVLAQGVVLGDGtkcRPA--ELTVLQSGERP--LIQIVIVEGRYHQIKRMFAAVG-----------------------------------------------
>UniRef50_Q6SI36(68-210:255) Pseudouridine synthase n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI36_9BACT  E=7e-05 s/c=0.35 id=21% cov=64%
-----------------------LLVCKPRGYVTTRFD-PEGRRTILNLISNVREYVYPVGRLDYDSEGLVILTNDGTLAARLTHP--RYGVERVYEVRVRGVPSQA-----------AIDSLRHGVLINGRRTASSSVKFLRRLKAKSSenaLLRVAIREGRNRQVRKMCEAIGHPVI-------------------------------------------
>UniRef50_C6JI84(67-202:236) Pseudouridine synthase n=2 Tax=Fusobacterium RepID=C6JI84_FUSVA   E=7e-05 s/c=0.37 id=22% cov=59%
------------------------ILNKP--LEVLSSSKDDRGRKTVVDLINCKERIFPIGRLDYNTSGLIILTndgelFNRIIHPKA-------EIFKEYYVKVLGEIKE-----------NNVELLKNGVELDDG---ITlpaNVRILRREKGKTELLVAIRE-GRNRQVRRMMDKINHPVI-------------------------------------------
>UniRef50_A5V220(69-192:624) Pseudouridine synthase n=5 Tax=Bacteria RepID=A5V220_ROSS1   E=7e-05 s/c=0.40 id=24% cov=57%
-------------------------LHKPAGVVST-TDDPQGRPTVIDLVNLE-QRLFPVGRLDYDSEGLLLLTDDGELTQKLTHP--SYQVEKEYRVLLNEAPSPAA-------LRAW----RTGVELDGVKTAPAWVELIERTPDG-AWVRVILHEGRKRQIR------------------------------------------------------
>UniRef50_B0RHF4(87-224:291) Pseudouridine synthase n=3 Tax=Actinobacteria (class) RepID=B0RHF4_CLAMS  E=7e-05 s/c=0.36 id=27% cov=48%
-------------------------------------------------------RLFNVGRLDAETSGLLILTNDgDLAHVLAHPSF---GVLKTYIAKVTGRVTPQ--TI---------QRLTQGVDLEDGPIQADRARILSGGGDQT-LVEITLHSGRNRIVRRMLDEVGHPV--------------------------------------------
>UniRef50_Q87NB7(68-151:312) Ribosomal large subunit pseudouridine synthase B n=17 Tax=Bacteria RepID=RLUB_VIBPA  E=9e-05 s/c=0.59 id=27% cov=22%
-----------------------------------------------------------VGRLDANTSGLLLFTTDGELANRLMHP--SRQVEREYLVRVFGEVTEQK---------------------------------------------------------------------------------------------------------------
>UniRef50_B5ELL5(85-216:268) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B5ELL5_ACIF5   E=9e-05 s/c=0.37 id=23% cov=60%
----------------------VLLLHKPRGVLT--TRQDERGRATVYDLLPGSPWLAPVGRLDQASSGLLLFSNDPHWAQRLLDP--DQHVAKTYH--VQIRPPLSTDTV-VQLAAD---------SVLDGEPCLPmQIREL-RCGGKTQWLEFILQEGRNRQIRRLLAA-------------------------------------------------
>UniRef50_C6XB83(297-427:455) RNA-binding S4 domain protein n=2 Tax=Methylophilaceae RepID=C6XB83_METSD  E=0.0001 s/c=0.37 id=27% cov=60%
----------------------------PAVVLVHPDN-HWAEDPVQKEFRRGFLKgLAPAGRLDIDSTGLLVLTQDGRVARQLIG--EDSQTEKEYLVRVEGTLS-DEGLRKLNHGLSLDGVQL--------KPAK-----VSWQNEDQLRFVLRE--GRKRQIRRMCELVGLHVVG------------------------------------------
>UniRef50_B8G2X0(69-200:567) Pseudouridine synthase n=3 Tax=Bacteria RepID=B8G2X0_CHLAD   E=0.0001 s/c=0.37 id=23% cov=61%
-------------------------LHKPAGVVS--TAEDPHGRPTVVDLVDVPARVFPVGRLDLDSEGLILLTDDGELAYALTHP--SFEVEKEYRVL-----------LDRALTPDALRSWRNGVLLEGEMTAPAWVELLETTPEGV-WVRIVLREGRKRQIRAVAKLLGY----------------------------------------------
>UniRef50_A8ZRV1(72-198:241) Pseudouridine synthase n=3 Tax=Desulfobacteraceae RepID=A8ZRV1_DESOH  E=0.0001 s/c=0.38 id=23% cov=58%
-----------------------IALNKPPGYVT--SCLQKQETTVMELVAVD-QRVFPVGRLDKPSCGLLLMTSDGGLHQRLSHPSFDH--EKEY------DVACDRPVSDADLDA---MRRGMVITGRKTRPAK-----VKRLSDRRFLIILQE--GRNRQIRR-MAEM------------------------------------------------
>UniRef50_A4S9F7(105-253:287) Predicted protein n=3 Tax=cellular organisms RepID=A4S9F7_OSTLU   E=0.0002 s/c=0.32 id=31% cov=64%
------------------EDVDglLIVMHKARGVVcSHDVREGTSVyDALPERWRRRKPSIESVGRLDKDTSGLLLLTDDGALVHALTTP--KKEIGKWYRV-----------KTDRPIPRDAVEVFASGELTLDGetracKPA-----VCELMDDETeARLRLTE--GKFHQVKRMFAFFGCTVIG------------------------------------------
>UniRef50_C1D9V0(59-229:231) Pseudouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9V0_LARHH  E=0.0002 s/c=0.28 id=26% cov=74%
--------------------EHLyLILNKPLDLEC--SRKPTVRTGVLTLFPPRYSErgVQPVGRLDADTSGLLLLSDDgQFIHRITSP---KHLVPKTYVATCARPVEPEH--LRQLLAGVVLNDDPAPVV---ARSART-------LDEHTLELVVTE--GRYHQVRRMIAAVGNH--CDALHRSRIGELVLDGLApgqwreLTAAELAL-----------------
>UniRef50_C7REA2(66-147:232) Pseudouridine synthase n=4 Tax=Anaerococcus RepID=C7REA2_ANAPD   E=0.0002 s/c=0.58 id=28% cov=37%
--------------------------NKPAGFLS----ATEDKDPTVIDLLDDFYKvidLSIAGRLDKDTTGLLLLSTDGKFIHKVTSP--NSNIEKTY--LVECRDKIDESLIDL----------------------------------------------------------------------------------------------------------
>UniRef50_A5Z4I7(2-131:175) Pseudouridine synthase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4I7_9FIRM  E=0.0002 s/c=0.37 id=23% cov=59%
-------------------------LNKPAGVLS--AVSDNNCKTVIDLLdVTPKKGLFPVGRLDKDTEGLLLITNDgELSHNLLSPA---KHVDKTYYVELNGDLIDS----DIELFEKGLDIGEKNLT----KPAIL--KILEKRS--TALITITE--GKYHQVKRMFQAIG-----------------------------------------------
>UniRef50_A3YG85(4-152:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=A3YG85_9GAMM  E=0.0002 s/c=0.32 id=26% cov=62%
----------------------IIVFNKPFQVLSQ-FTTDEEKATLSSFIDKANFYPAG--RLDYDSEGLLLL--TD--HGALQHLIAspQHKMPKTYLVQVEGELTKE-----------AVEQLRVGVELKDGltKPAEakiaSDFEpwprhppIRERKNIPTSWLELTITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_A5TWE7(66-190:234) Pseudouridine synthase n=10 Tax=Fusobacterium RepID=A5TWE7_FUSNP   E=0.0002 s/c=0.38 id=24% cov=54%
-------------------------LNKP--LEVLSSSSDDRGRKTVVDLIKTDKRIFPIGRLDYMTSGLILLTndgelFNRVVHPK-------SEIYKKYYIKILGELKKEE-----------IDELKKGVLLDDGKtlPA--KISGIKYDKNKTSMF-ISIREGRNRQIRR-----------------------------------------------------
>UniRef50_Q1IJT7(65-225:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=0.0003 s/c=0.30 id=21% cov=67%
-----------------------VLLHKPKGYVTTVSD-PEGRETVMDLVKGIPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHA--STHVPKKYLVKVSGEPteeqiqelrngvqlPPEQGHIHAdPREGGRFGGEKRRSTAVKTAPCKIE---LTREGDNP-WYEVTLNEGRNRQIRRMFDFIGHHV--------------------------------------------
>UniRef50_Q1D9N8(86-225:268) Pseudouridine synthase n=4 Tax=Cystobacterineae RepID=Q1D9N8_MYXXD   E=0.0003 s/c=0.34 id=28% cov=58%
----------------------VLAFHKPAGLLSSTERQHRTGTVFEALLPQLPPELagytwHAVGRLDVDSTGLLLFtnddklvahATSPDAHLP-----------KRYVATVFSTASDE---------RVEPLRRGMTLDDGPARPAK-----VNVRDEHTVEVTLTE--GRHHQVKRMLGAVGLPV--------------------------------------------
>UniRef50_Q00UF3(334-427:428) Chromosome 16 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q00UF3_OSTTA  E=0.0003 s/c=0.51 id=30% cov=39%
-------------------------------------------------------RVWAVNRLDAPVSGVWLCATsvkaSLKAREWLS---KPGTSTKTYLARVsKGsALTTPDGglRIDAPLWKNAKTSVAElRPESEGGKPCATRIFLLE----------------------------------------------------------------------------
>UniRef50_A8S8D3(61-187:233) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D3_9FIRM  E=0.0003 s/c=0.37 id=26% cov=55%
-----------------------LMLNKPEGVVS--ASTDKRDTTVVDLVGDAYPRreLFPAGRLDK-TStGFVLL--TDdggFAHDILSP---RHHVSKTYTV-----------TIDTPLTQEMCTGFAAGVTLADG-TALSPAEVTALSPDGLT-VRVVLRQGVYHQI-------------------------------------------------------
>UniRef50_C6MZI4(55-203:240) Pseudouridine synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZI4_9GAMM  E=0.0003 s/c=0.32 id=29% cov=62%
----------------------LILFNKP-FAVVCQFTGEKHEHTLAEFI--DKPDFYAAGRLDKNSEGLLLLT-NDGA---LQHQLTHPKFnkKKYYWVQVEGIPTAadleplKKGLV----LKDITFLPAEVRCIEE--PAlwpRTppvRFR----QSIPTSWLEIILREGKNHQVRRMTAAMGFP---------------------------------------------
>UniRef50_C0QWY7(63-190:229) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QWY7_BRAHW   E=0.0003 s/c=0.37 id=28% cov=21%
-------------------------LNKPRGYVV--SSNKNEGKPIYNLIKKDFDNIYPVGRLDKDSSGLILF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D0BMY5(56-189:237) Pseudouridine synthase n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMY5_9LACT  E=0.0003 s/c=0.35 id=21% cov=58%
------------------EDNsqkyYLL--NKPKGVIT--ATTDSQLPTVIDLFKNENIEgLYPIGRLDRDTEGLLIITNNGPLGYRLLNPIQH--IEKEYYVEVNG-----------PLDNSCIQRFYDGIMFHDGticKPAKL--SILE-SSPSFSKATVTISEGKFHQI-------------------------------------------------------
>UniRef50_B2T6J8(2-152:189) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B2T6J8_BURPP   E=0.0004 s/c=0.31 id=27% cov=66%
---------------------HLLALNKPFGTICQ-FSPHETRASLADWVK--VPDVYPAGRLDSDSEGLLLL--TDD--GALQARIAEprHKLVKRYWAQVEGAVDAATLKklargVDL---GDYVTRPCRAEYVEPTDALWTRTPPIRfRAAIPTTWIELSITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_C1DTU8(64-202:247) Pseudouridine synthase n=5 Tax=Bacteria RepID=C1DTU8_SULAA   E=0.0004 s/c=0.34 id=27% cov=57%
-----------------------LAIYKPVGYLSAVGKdrfGRKTLTDFLNELKIPY-KLFPVGRLDYNSEGLLIltndgeFA-NKVAHPR-------NEIKKVYKVKVAGEVSQetlkkmEEGTI-LEDGFFKPDKIKMLKREEDG-----------------TWLLVEIHSGKKRIIRRFMDSFGH----------------------------------------------
>UniRef50_C5EVC9(101-235:294) Pseudouridine synthase n=6 Tax=Clostridiales RepID=C5EVC9_9FIRM   E=0.0004 s/c=0.35 id=31% cov=22%
----------------------LLVVNKPRGIVCTTSDKDRAMNIVEYL---DYPeRIYPVGRLDKDSEGLLLM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A7HJ21(67-220:265) Pseudouridine synthase n=3 Tax=Thermotogaceae RepID=A7HJ21_FERNB   E=0.0005 s/c=0.30 id=19% cov=64%
------------------EDDNVLvdgkilkpnqfeyyVLHKPKDYVTT-LFDPKQKKTIGELIKHIKTPLKPAGRLDKDATGVLILTNDGELIDILTNA--KYRVKKEYIVKVKSVVSAEELV---KLKKGIYDKGEFLKLE--------HFKIIEKSSE-YSIVRVELIKGKKHEIKRLFSSIGH----------------------------------------------
>UniRef50_A0JV58(225-369:406) Pseudouridine synthase n=37 Tax=Actinobacteridae RepID=A0JV58_ARTS2   E=0.0007 s/c=0.32 id=26% cov=61%
-------------------DENMVymVFNKPKGVVSTmedPDGRPCISDFVRN---THGERLFHVGRLDVATEGLLLltndgeLA-NRLTHPSY-------EVPKTYLVQVRGPFPQGIGA-----------QLKAGVELEDGMASVDSFKLVDSTPGHV-LIEVVLHSG-KNRIvRRLFDAVGFPVL-------------------------------------------
>UniRef50_D0MIA1(71-207:268) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIA1_RHOM4  E=0.0007 s/c=0.34 id=32% cov=46%
--------------------------------------------------------LFPVGRLDRNTTGVLLLTNDGELANRL---MHPRyRVEKIYVARTARPVKPEEAE-----------QLRRGVQLEDG-PAR-AVQVAVNPADPH-EIALMIYEGRNRQVRRMLEAIGH----------------------------------------------
>UniRef50_B9ZS86(54-146:318) Pseudouridine synthase n=2 Tax=Chromatiales RepID=B9ZS86_9GAMM   E=0.0008 s/c=0.49 id=21% cov=42%
---------------VIHmaEHAHrWLVYHKPVGEICSRSDPEGRKPVFASLPRLKGQRWVAVGRLDLNTSGLLLFTTDGELANRLMHP--SHSLEREYAVRVLGEVPDD----------------------------------------------------------------------------------------------------------------
>UniRef50_Q6G8H4(65-183:231) Pseudouridine synthase n=61 Tax=Firmicutes RepID=Q6G8H4_STAAS   E=0.0008 s/c=0.39 id=26% cov=53%
-------------------------LNKPKDYIS--ATEDHHSKTVIDLIpEYQHLNIFTVGRLDKDTEGLLLITNDGDFNHELMSP--NKHVSKKYEVISA-----------NPITEDDIQAFKEGVTLSDGkvKPAI-----LTYIDNQTSHVTIYE--GKYHQ--------------------------------------------------------
>UniRef50_B4W9R3(151-229:519) Pseudouridine synthase n=2 Tax=Brevundimonas RepID=B4W9R3_9CAUL   E=0.0009 s/c=0.58 id=29% cov=36%
--------------------------HKPAGLLTSHSD-PTGRPTVFDALPAGLPRVISVGRLDLATEGLLLLT-ND---GELSRALElpATSLVRQYRARARGKITQEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_C0ACE6(84-214:253) Pseudouridine synthase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACE6_9BACT  E=0.001 s/c=0.35 id=23% cov=59%
----------------------LLMLHKPTGFVcSHDEReGPRVYDLLPPRWRARNPQVTSIGRLDKDTSGLLILTdRTELVHTYTSP---RHKVPKLYRA-----------TLDRDVPASLVDLFAAGTLQLDGEKAPCAPATLRLPAPRVA--ELVLVEGKYHQVRR-----------------------------------------------------
>UniRef50_C7NAV5(94-312:326) Pseudouridine synthase n=5 Tax=Fusobacteriaceae RepID=C7NAV5_LEPBD   E=3e-64 s/c=1.13 id=33% cov=95%
--------PENIDIEIIYEDNDLAVINKKAGIVVHPANGHYSGTLVNAILYHikdlsginGEIRPGIVHRLDKDTSGLLIIAKNDKAHLKLSQMFHDKTVKKIYLAILKGKLNQKSGRIVTQIGRDKNDRKKMTVINDlnSGKTAITNYEVISQT-EKFTLVKVHIETGRTHQIRVHMKHLGYPILGDSVYGRTDTE---KRQMLHAYKLEFQHPITEENLEFIAklPEDF
>UniRef50_A6DUC9(85-310:323) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUC9_9BACT  E=1e-62 s/c=1.07 id=37% cov=96%
--------PEDIELDIIYEDDDILVVNKPAGMVVHPGAGNYTGTLVNALLGRDLDtfsamddgssRPGIVHRLDKETSGVIIVAKSAKNLDKLSRSFARRDVEKYYVALCRGTIRVGRDTITSHIGRSRSNRQKMenTNDSNRGKEAISHYKVLA-DNNGATLVKLKIDTGRTHQIRVHMSGINHPVVGDKLYGVRrlDEKESPDRHILHAWRTRIIHPGTQEIMTFTAPLhdDF
>UniRef50_A7HV45(222-462:482) Pseudouridine synthase n=56 Tax=Alphaproteobacteria RepID=A7HV45_PARL1  E=1e-61 s/c=0.99 id=38% cov=96%
---------QAIPLEIVYEDADLIVVMKPAGLVVHPAPGNPDMTLVNALVAHcgetlsgigGEKRPGIVHRLDKETSGLMVVAKTDRAHQGLSAQFAAHgrdgKLTRAYTALTWGVPQTRKGTVDANIARSSHNRSKMATVRDrgeetGGRIAITHYTVKTDYADGlVAEVECRLETGRTHQIRVHMTALGHPLLGDATYGTGMKSRKSKlspeaqaalerlnRQALHAHHLGFEHPVAGEKMSFDAPLP-
>UniRef50_A6SXT6(110-330:342) Pseudouridine synthase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXT6_JANMA  E=2e-61 s/c=1.07 id=34% cov=96%
--------PEAMDLAIVHEDAEMLVINKPAGLVVHPAAGNWSGTLLNGLLHYlpsisGVPRAGIVHRLDKDTSGLMVVAKTLIAHTDLVRQLQARTVKREYLALVWGTPN-ITGKIDASIGRHARDRIKMAVSENlTAKPAVTHFQRLATgmlDGRPVSLMLCRLETGRTHQIRVHMQSIGFALVGDGLYGKQHLTTVFPRQALHARRLGLIHPVSGEAVEWSSelPQDF
>UniRef50_B8GZR6(101-329:342) Pseudouridine synthase n=2 Tax=Caulobacter vibrioides RepID=B8GZR6_CAUCN  E=4e-61 s/c=1.03 id=35% cov=95%
------------PLSILYEDAHLIVVDKAAGMAVHPAPGTYNGTLVNALLHHcgaslsgvgGVARPGIVHRLDKDTSGVMVAAKSDAAHRGLSTLFATHDIDRLYVALTRGAPNPPTGTIQTQIGRSPGDRKKMAVLRAGGREAITHYRVEAAFGPAdrplAARVACRLETGRTHQIRVHMASKGSPCLGDPVYGAAQpaaavreriEAAGLRRQALHAAVLGFVHPITGETLRFETPLP-
>UniRef50_C1SM47(76-290:302) Pseudouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SM47_9BACT  E=2e-59 s/c=1.07 id=29% cov=95%
--------PVKMDIEIIYDCDEFAVINKPAGITVHPAPGHADDTIVNAMLAEfditddNDLRPGIVHRLDKDTSGLMIVAKNRKSREVLSKVFADRDIDKRYLAVCWGKPKELEFTIEQPIGRHYKDRKRMCV-REDGRYSKSGVRVLKQ-NNNAFLAEIRIFTGRTHQIRVHMSHAGFPLAGDVVYGHRQSLKLpIKRQALHSFRLAFVSPFTGEDMVFESPLP-
>UniRef50_Q6MEC0(82-297:318) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEC0_PARUW  E=5e-59 s/c=1.06 id=35% cov=95%
--------PENIPLSILYEDEHLLVINKPAGMVVHPAPGNWSGTFVNALLYYcqklpllpDTIRPGIVHRLDKGTSGLLVAAKTLETQQKLIELFASRKVYKAYLAICIGRPA--DGEIQAPIGRHPIHR-KQMAVIPTGKPAISFCKTLG-WSDKLSFVQIEIATGRTHQIRVHMKYRGSPILGDPLYGQISLNQYysVPHQLLHAAVLRFQHPISLENLEFCTPPP-
>UniRef50_C6LL16(80-291:313) Pseudouridine synthase n=3 Tax=Clostridiales RepID=C6LL16_9FIRM   E=5e-59 s/c=1.08 id=31% cov=95%
--------PVPMKLDIVYEDEDLLVIDKPADMPVHPS-IHNFDNTLANGLAYYYESrgeafvYRCITRLDRDTTGLLLVAKNMLSGAFLAEMGKRREIHREYLAIVTGK-TEAEGTVDAPIARVEGSVLERCVDFQRGERAVTHYRTLEY-RDGYSLVRLKLETGRTHQIRVHMKYIGHPLTGDFLYNPDY--RLMDHQALHSHYLAFRHPITGERMEFTSQPPW
>UniRef50_C1F7V3(100-343:355) Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7V3_ACIC5  E=2e-58 s/c=0.93 id=32% cov=96%
---------EDIPLDIIYEDKDLIVVNKPAGMMVHAGSGatdsARNRGTLVNALLGRQEklsktggdlRPGIVHRLDKETSGLIIVARNDAAHQRLAEMFSQREIHKTYLALVHGHIAEDRGTINAAIARDViRRTRMTTRRTEGARTAISHYRVqrrIETRWGKFTLVSVRIETGRTHQIRVHLSSIGHPVVGDTHYGAPttivlpvanrarrkqlpaPEGLSLPRNFLHAAELKFPHPRSEKPLHLEAPLP-
>UniRef50_B0VJ94(84-317:351) Pseudouridine synthase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ94_9BACT  E=3e-58 s/c=0.97 id=33% cov=95%
--------PQDIPLDVVYEDEYLAIINKKAGMIVHPGFGNPEGTLVNAILYRfgenlssgkEFNRPGIVHRLDRGTSGLIIIAKNDLTHAKLSDMFARREIKKTYFAITTGIPEPEKGEIETYLARSNKN-PRTICVTNEGRYALTHYKTIKTW-HYFALVEINPATGRMHQIRVHFAHIRYPILGDLLYNSRRYvqslvpqnmkkkvtellVNHLRRQALHSWKLEFFHPITGYPISVSAPIP-
>UniRef50_B2RIT5(105-343:365) Pseudouridine synthase n=80 Tax=root RepID=B2RIT5_PORG3   E=4e-58 s/c=0.95 id=36% cov=96%
--------PEDIPLDIVYEDDVLLVINKPAGLVVHPGHGNYTGTLVnaLAYYLREDPEYDPmdpslglVHRIDKDTSGLLVVAKRAEAKSDLCKQFYYKTTHRSYRALVWGRFDYPIGTITGNIGRDLKDRLQMAVFPPDgdiGKPAVTHYQVLEELA-YVSWIECRLETGRTHQIRAHMKHIGHTLFADERYGGDQILRGnntanyrrfvqnclaiCPRQALHAKTLGFRHPVTGVEMQFDSdiPAD-
>UniRef50_D1N7N8(81-301:323) Pseudouridine synthase, RluA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7N8_9BACT  E=5e-58 s/c=1.02 id=36% cov=94%
-------------FPILYEDDVMLVIDKPAGVVVHPAAGNPTGTVVNALLGRYPQlaeqlacttsRPGIVHRLDKDTSGCLAVAKTANAQFKLSTAFAGRETRKTYLAITRGVPIRRSGELSTLIGRHPVSRQKMAVVERNGKLAITRYRVEYTgmlDGVEIGVLAVRILTGRTHQIRVHLASLGVPVLGDAVYGGaRTAVAGVERQLLHAWKLCVPHPATGTPMEFTAPPP-
>UniRef50_A1HR26(70-279:301) Pseudouridine synthase, RluA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR26_9FIRM  E=1e-57 s/c=1.07 id=35% cov=94%
--------PMKMPLHIVYEDDFLLIVNKPAGLLVHPTS-DPTEPTLAHGILYYLHSkgalgaFHPIHRLDRNTSGLVAIAKHPHIQHALSGGGAKG-LKRLYLAVVTGIPSSLMGRIDAPIGRH-PNSIIKRVVRSDGQPAITLYRVLSTFS-MASLVELELLTGRTHQIRVHLSHIGHPLLGDDLYGG--ATDLIRRQALHAASLSFRHPATDKVLTLTSPLP-
>UniRef50_C8X1I9(79-308:547) Pseudouridine synthase, RluA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1I9_DESRD  E=3e-57 s/c=0.97 id=36% cov=94%
--------PEVGPVEVVYSDPDVVVVNKAAGVTVHPGTGCESGTLVHHlaalypeLARFDGERPGVVHRLDKDTSGLLTVALNESARLALTRSFARREVDKEYLTLVHGRP-EAEGTVDHPLGRDPQSKIRMAVVPRGGKEALTRFKRVWTSPDGrVSLLRVRILTGRTHQIRVHMAYLGFPLVGDALYGPqaqaafQRSRPLLARLakhhMLHAWRLAFPHPRSGRMVCCE-----
>UniRef50_A4RT55(60-332:332) Predicted protein (Fragment) n=3 Tax=Chlorophyta RepID=A4RT55_OSTLU   E=4e-57 s/c=0.82 id=37% cov=95%
-------------LDIVHEDESVLVVNKAAGMVTHPSAGHESGTLVNAVLGHcdlpelvvptgnqalsdddeddedavdedegardGMIRPGIVHRLDKGTSGVMVVAKDASAHNSLCEQFAARVVRRKYVAILSGVPSPSKGRIEAPIGRDPRDRLRMAVTQGGGRFAASNYEVIATlANGNASLVEWRLETGRTHQIRVHAKHIGHPILGDDTYGGGGGAavsalsrygvfdvkeakalmSTIDRPMLHARTLGFTHPQSGEALDFSrdPPEDF
>UniRef50_A8UMR7(355-561:561) Pseudouridine synthase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UMR7_9FLAO  E=7e-56 s/c=1.06 id=49% cov=91%
-------------LEIIYEDDFLVVLNKPHEFLSVPGKT--IKDSVLTRMQNYLPDATgplLLHRLDMSTSGLLLVAKNERTHKNLQKQFIKRIVKKRYVALLNGKLEPSEGTIDLPLRVDLNNRPRQLVCDEHGKLAKTKYEVIE-IKNNKTRIHFYPITGRTHQLRVHAAHykgLNMPIIGDDLYGTA-----SNRLHLHAEMLSFEHPVKREWVSFSCKAPF
>UniRef50_Q5E092(372-576:576) Pseudouridine synthase n=3 Tax=Aliivibrio RepID=Q5E092_VIBF1   E=2e-55 s/c=1.06 id=44% cov=91%
-------------LEIVYEDDVLVIVNKPVEFLSVSGK--YISDSVHARIQARYPNATgplIVHRLDMSTSGLLVLTLTAESNKQVQKQFIERTVEKRYTALLEGNIETDNGTINLPLTGDMEDRPRQMVNHKSGRKAETHYQVIAQEGKRT-KVHLYPHTGRTHQLRVHCAHqagLNTPIVGDDLYG-----FKADRLHLHAGYLKFKHPTTNETVEFSCPEDF
>UniRef50_B0VCN8(10-212:212) Pseudouridine synthase n=16 Tax=Acinetobacter RepID=B0VCN8_ACIBY   E=3e-55 s/c=1.06 id=47% cov=92%
----------------IYRDDDFMVIHKPSDILSVPGKGDLH-DSVLTRLVAIEPRTLLIHRLDRDTSGILVFGLSKRGQSAIARQFQDRQTSKIYEALVAGHL-EGEGTVDIPVVYDPSRPPLHIVDASHNKPALTHWQAIEHFqiqGQPVTRVKLTPITGRSHQLRVHMQYLGHPIVGDTLYAAPE-QLLVPRLCLHAKQLSFNHPVTGESLTFNCPVPF
>UniRef50_B8FTI5(74-288:302) Pseudouridine synthase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTI5_DESHD  E=3e-55 s/c=1.00 id=32% cov=96%
----NSIPGENLPLEILYEDDYFIAINKPAGQVVHPTPRYPRGTignaVVGYWLAKGEARpFRPIHRIDRNTSGVVVIGKNQFAHQQMAWQHAHGRIHKCYRGIVEGQVMEDQGTIKAPIAL-APDSFIQRQISPEGSPAVTLYKVLERYQD-ASLLEFILETGRTHQIRVHCQHLGHPLLGDDLYGGNLAR--INRQALHSSIYEFNHPLTGELTTIQAPLP-
>UniRef50_Q3ECD0(144-415:430) RNA pseudourine synthase 2, chloroplastic n=4 Tax=Magnoliophyta RepID=PUS2_ARATH  E=5e-55 s/c=0.79 id=32% cov=96%
---------EDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLpcvdysnseedddsdeetfsddeemttspssyaasvRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAaipggVRGGRARHAASRYKVIETFaGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSllqkrvsrsdqeeiielisrmDRPCLHAIVLGFTHPCTGEIVKFSCPPP-
>UniRef50_B8CWB7(85-299:310) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWB7_HALOH  E=1e-54 s/c=1.00 id=33% cov=96%
-----YYDPAPLDLDIIYEDRHLLVINKPANMLVHPTPVEKSNTIVNgvlyhMRNQGNYNLVRPIHRLDRNTTGLLLIAKNQYAHNYITHQFQNNNIHREYLAFVHGNVEFKKESINAPIGKTRDSLIKRKVDHTLGKRAVTHIKVVK-PGGLISLIRVKLETGRTHQIRVHLSHLGHPLLGDTLYGGEDI--LIKRPALHSYKVTCCLPFKHKEVTFKAPLP-
>UniRef50_A6TSZ4(80-292:308) Pseudouridine synthase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSZ4_ALKMQ  E=3e-54 s/c=1.00 id=32% cov=95%
-------EPQEIPFNVVYEDIDVIVINKEPGIVSHPTKSHP-KDTIANAAQNYLekkgvaCRIRFVNRLDMDTSGLLVIAKNPYTHHIMSQQMKANEITKKYVAFVKGVVVANEGEIDGAIYRSSDETIK-RVVDDRGQQSLTKFTVLERYAD-ATMLEVSLLTGRTHQIRVHMESIGHPMLGDHLYGYVDTE-LIRRQALHASYLSFLQPRYKEKIEVRASLP-
>UniRef50_Q63E77(72-292:307) Pseudouridine synthase n=73 Tax=Bacillaceae RepID=Q63E77_BACCZ   E=3e-54 s/c=0.96 id=30% cov=95%
------VEPEYGELHVVYEDDHVLIVNKPEKMDTHPSEKGGMG-TLANLVAFHFQMQGLetkvrhIHRLDKDTTGGVVFAKHRIAGAIMDRLLMERKIKRTYAALVEGKVKKKQGTIDAAIGRDRHHATRRRV-SPKGDQAITYYKVEEYFKKqNVTLVTLQLETGRTHQIRVHMSYNGNPLVGDVLYGGGT--KYMSRQALHAMKINFLHPITKEEIEVDVP---
>UniRef50_C9KIU1(71-284:296) Pseudouridine synthase n=3 Tax=Veillonellaceae RepID=C9KIU1_9FIRM   E=3e-54 s/c=1.00 id=34% cov=95%
-------EPEDLPLDIRYEDDYLLIVNKPAGQLVHPTTKEAHgtlGNAVLYWYKAHGEHHayHPVHRLDRNTSGLVLIAKVPQVQYKLTpRHGEGKLFHREYLALIEGELTPPEGLIDAPIARALPS-IILRKVSPDGQTARTHYDTVQTDGK-LSLIHLVLDTGRTHQIRVHLAHLGHPLLGDDLYGGNLAR--IKRQALHAARLHFRHPMTGAEIDVQVPLP-
>UniRef50_B7HGW1(78-287:297) Pseudouridine synthase n=52 Tax=Bacillales RepID=B7HGW1_BACC4   E=4e-54 s/c=1.01 id=31% cov=92%
---------EDIPLCIIYEDDAVLIINKEANMSTIPSREHPAGSVANALLSHYDKQHlastvHIVTRLDRDTSGLMLIAKNRFVHHLLSKQHQQKAVKRTYEAIVHGKIVEREGMIDAPIGR-KSDSIIERTVCEDGQRAVTHFKVIDSTYHKT-HVALELETGRTHQIRVHMAHVGHPLLGDSLYGGR--RDEMKRQALHSKSLTFYHPILEKEMSFT-----
>UniRef50_B8I750(70-287:299) Pseudouridine synthase, RluA family n=2 Tax=Clostridium RepID=B8I750_CLOCE  E=4e-54 s/c=0.98 id=32% cov=97%
----EHIEPQDIPLDVIYEDECMLVLNKQSGIVVHPTSYHPD-NTIANGIVYYLKQKgvtkkvRPVSRLDRETSGIIIFAKNQFTQEMLIQQMHNNLFKKEYLGIVQGIPQNNEGTINLPIAR-KPGSIMLRHISEEGAPSITHYKILKTFpSHNSALLSFKLETGRTHQIRVHCKAMGFPIYGDTLYSD-NTNLFISRQALHSYRTEIIHPVTLKGVIFKAELP-
>UniRef50_P70870(79-282:326) Ribosomal large subunit pseudouridine synthase D n=23 Tax=Borrelia RepID=RLUD_BORBU  E=7e-54 s/c=1.04 id=37% cov=89%
--------PSNIPIAIIYEDSNVIVLNKPQGILSHPG-ISHWDDTVVNFLLYHIKslkinfneekiRPGIVHRLDKDTSGVLICAKNISTLRFLAQQFKDKRTNKVYIAIVKGNFNSFFGSIESFIDRDKHNRKKFSVSKDRGKKALTEYRLLLNFGE-YSLLALKPKTGRTHQLRVHMKYLNFPILGDEVYGRVDGSLKKITLMLHSYKLEID----------------
>UniRef50_Q8K9E9(79-303:315) Ribosomal large subunit pseudouridine synthase D n=4 Tax=Buchnera aphidicola RepID=RLUD_BUCAP  E=9e-54 s/c=0.94 id=30% cov=95%
--------PQNIALNTIYEDSNILIINKPPGLVVHPGAGNQDGTILNALLYRYtnissIPRCGIIHRLDKDTSGLMVIAKTIFSYNKLVTLLKKRKIIRKYQGIIKGNMISG-GIVNYPIMRHPFKRI-CMTTDSLGKKSITHYKIINRFKFHT-HVSFRLETGRTHQIRVHMLHIGYPLLGDPLYGGIDygcnyfqenrniyRKFNLFRQALHADYIEFIHPFTQKVMSWSASLP-
>UniRef50_P59838(81-308:321) Ribosomal large subunit pseudouridine synthase D n=3 Tax=Gammaproteobacteria RepID=RLUD_BLOFL  E=2e-53 s/c=0.93 id=36% cov=95%
--------PQNIPLNIIYEDNDILVINKASNMVVHPGIGHYQGTVLNALLYRYpsilkiSKQAGIVQRLDKDTTGLMIIAKTVSAYDNLLRSFKLRKVVKEYDAIVYGKFTSNAGVVNQPMRRHFAKRTFMSVHY-TGKSAVTYYSVVEEFKAH-SRVRINLKTGRTHQIRVHMAYINHPLVGDQKYKGNFSVFDIKkmsdelnnylldfnRQALHACTLQLLHPITQVQMKWNAPLP-
>UniRef50_B2S2T6(85-318:331) Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S2T6_TREPS  E=1e-52 s/c=0.89 id=32% cov=96%
--------PENISLSILFENEDIIAVNKAQGMIVHPGAGHWTGTLVQAlsfyrvyrarfedefsrQFQKGFPdffstlRQGIVHRLDKDTSGVLLTSRNMHAHEALVRSFKKRQVRKVYLALLQGVPARGVGVIETTIVRDRRRRTRFVASEDfsKGKYARTRYKVMKICG-ACAFVQFLLDTGRTHQIRVHARYLGCPVVGDPLYGSRNICGIPTTLMLHAYAVRFVLPRTKKRITLVAPIP-
>UniRef50_B5Y8D7(79-293:315) Pseudouridine synthase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8D7_COPPD  E=1e-52 s/c=0.97 id=31% cov=95%
--------PADVEYSVVYYDEHLAVIDKPPNLVVHPAPSVK-GLTLCHGLLKDFPqvknvgsaeRPGIVHRLDKDTSGLMLVALSEKGYAGLTKMISEKSVSRKYLVAVYG-VANRPFEVDAPIGRDPRNPTRMAVV-PHGKNAYTRFRPVQCL-EKVSLLEAELFTGRTHQIRVHLSHAGFYVLGDPVYGNVESRLLAPRVFLHSYYLELEHPITGERLFFVSPLP-
>UniRef50_A3DDK9(71-306:318) Pseudouridine synthase, RluA family n=3 Tax=Clostridium thermocellum RepID=A3DDK9_CLOTH  E=3e-52 s/c=0.87 id=29% cov=97%
-----FIQPEDIPIDIIYEDEFLIALNKQPGIVVHPTcshPGGTLANAVAFHLQKKGivKKIRPVIRLDRDTSGIIIFAKNPYCQEFLIRQMNDKTFIKEYIGIVHKVLENDNGTIDLPIAR-KPGSIMLRHISPDGDPAVTHYTVLERL-NGATLVKFRLETGRTHQIRVHCQAIGHPLLGDTLYPFEDTPYslsgnnphitqantpsitsgIITRQALHSQRAVFLHPFTKKILEITAPIP-
>UniRef50_Q38VN9(66-287:306) Pseudouridine synthase n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VN9_LACSS  E=4e-52 s/c=0.93 id=34% cov=95%
--------PVKGDLKIAYEDDHFLIVDKPAFVASLPAPNHPNNTManfVKQYLIDEQAESLAVHvvtRLDRDTSGLMMFTKHGFAHSLLDRQLQSKELQKTYIAIASGDMredLPQHAWIDRPIKRSEE-FYMRRVVGEGGKRSLTEYWQAAH-GDGATLVKLKLLTGRTHQIRVHFASLGHSLIGDNLYG--ESNDLLPRQALHCRQLTFYHPFEERTITVKSPVP-
>UniRef50_D2EJM0(75-288:304) Pseudouridine synthase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EJM0_PEDAC  E=2e-51 s/c=0.95 id=32% cov=95%
-------PPFDPDssqsPDVLFENDDLLVVNKPAGIKTHANQPHELGsmiNFLQAYFAKKDSNAYNVHRLDQWTSGALLVAKNPVVVPILSRQISQKLIQRTYLCVVEGHLKSRSGTITLPIGLDPHDQRKRQINGPGAQPATTHYQVVREFVER-SLLRVQLATGRTHQIRVHLAALGHPIVGDPLYNSLADGA---PMRLHSWQVKFPLPFSQSWQTVTAPVP-
>UniRef50_Q126H9(120-357:378) Pseudouridine synthase n=1 Tax=Polaromonas sp. JS666 RepID=Q126H9_POLSJ  E=3e-51 s/c=0.85 id=31% cov=97%
-----YAPSREFP--VLFEDDFLLAIDKPAGVAVHGGSGVSFGVIEQLRMARPQADFlELVHRLDRETSGILLIAKRRMALKLLQEQFRERETDKVYLALVSGNWPANHRVIDKALhkyllpgGAGEGERRVKVVpnDHPDGMRSVTLVKVKSAFaalpaapGTPFTLLEVTIKTGRTHQIRVHLANEGHPIAGDDKYGDFELNKslqksvaggaPLKRMFLHAWSLKFNHPKTRKTIHLETPLP-
>UniRef50_C6J215(78-299:310) Pseudouridine synthase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J215_9BACL  E=4e-51 s/c=0.91 id=35% cov=95%
--------PVEAELSLLYEDDFCLVVHKPAGLKVHPDGNEGGasrrdsapPDTLANRVAGWYASLGqpiaaaHIHRLDEYTSGPVLFAKNEYAHLKLDEAMSRKEIGRTYIAFVQGVVSSALKIIDQPIGRDRHHNQRRRV-SPTGKPAITHVELMEVYPKHeVSLVRLTLETGRTHQIRVHLSAAGHPLVGDALYGG--STKWLPYQALHGERLVFPHPLTGETVELDDPWP-
>UniRef50_Q4A7R4(76-295:304) Pseudouridine synthase n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4A7R4_MYCH7  E=9e-51 s/c=0.91 id=31% cov=95%
-------EPAEIDFEIIFQDQNMILINKPKNLVVHPGVGNWKNTLVNGLISHfdsleqlDHIRPGIVHRLDKDTTGLLLVAKNAKAHSFFVNELANRQIKRFYKAIVIGKVLHKFMKINLPIGRDLKNPLKKTISFFNSKPAITNVELIKHFnyqNQDFSLVKCQLETGRTHQIRLHLAHIGYPIYGDPIYGKKIDELG---QRLHAYKLVFKD-LNGLSREFQAdlPEEF
>UniRef50_D2R760(373-595:603) Pseudouridine synthase, RluA family n=2 Tax=Planctomycetaceae RepID=D2R760_9PLAN  E=1e-50 s/c=0.90 id=34% cov=93%
-------------IRVVYEDEAIAVVHKPAPLPLHaSGRFHRNTLEWILREIYDPQKPRPVHRLDANTSGLVLFARTRHFAKLLQQQFTQGKVEKFYLALVSGHPVEDRFVSTAPISAEAGVFGSRSVDEEAGLPAETRFEVLARtttaDGKPVALVRCQPITGRTNQIRVHLWQLGHPIMGeqsylaDQKHGTTQTHTVdDPPLCLLAHQLSFQHPVSRERMTFTS----
>UniRef50_Q12RE8(379-593:593) Pseudouridine synthase n=83 Tax=Bacteria RepID=Q12RE8_SHEDO   E=7e-50 s/c=0.93 id=47% cov=94%
------NPADDKQITVIYQDEHLLVISKPAEFLSVPGK--NISDSVHTRIIRDFPSASgpiIVHRLDMSTSGLMVIALNKEAHESLQKQFILRTVTKRYIALLDGLLPNRtagdEGIISLPLRGDLDDRPRQLVCHEHGKSAETRWQIIDIQQGRT-KVFLYPKTGRTHQLRVHCAHsqgLHLPIVGDDHYGVR-----ASRLHLHAESLSFTHPQSREALHFQLDADF
>UniRef50_C8PQT2(5-236:246) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT2_9SPIO  E=3e-49 s/c=0.84 id=36% cov=95%
------------PFTLIYADDDMVAVNKAAGLLVAADRWDAEAPRLDLLIQKELPQIAPscnklyaVHRIDKDTSGILLYALNAEAHRTLNTAFQNREIKKTYRLLIHGRVSEEQFTVDLPLRADGDALHRTVVDKRRGKEAVTHFTVLETFRQ-FSLLEACPVTGRTHQIRAHLAAAGYPIVCDSLYGSGKpvllselkqrwrgdvytEQPLIGRLALHAYRLEGVHPRSGQPFAFTAEyaKDF
>UniRef50_A1ALH6(82-279:306) Pseudouridine synthase, RluA family n=9 Tax=Desulfuromonadales RepID=A1ALH6_PELPD  E=7e-49 s/c=0.98 id=33% cov=88%
----------------LHEDDDLIALNKPAGVNTQ--RTPYQLKGTLEYWASEYFRRqgnpepaRVIHRLDRGTSGVMLFPKHKRAAAWLSKRFHDGQVEKRYLALVSGTPGQIEWRVDGPIGKIASAR---YGIVAGGRSALTEFRLLAESC-GYALVEAKPLTGRTHQIRVHLQSCGLPIVGDGTYGGEP----AARMMLHCASLRFAD-GGGREIVVEAPLD-
>UniRef50_B5JUW4(96-305:321) Pseudouridine synthase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUW4_9GAMM  E=8e-49 s/c=0.93 id=35% cov=92%
---------------ILFEDERLLVINKPSGMAAHAGSGVPFGIAeAVHQHHCDGKRTELVHRLDRETSGCLLLAKGRSVLNVLQDSFRQRETHKQYLALLVGDL-KGSRRVDLALQKTKLSGEAMVVVDEAGKSALSDFEPLAHYPWNdrtLTLARVTIHTGRTHQIRVHARALGLPLLGDDKYGDERlnrdaKRQGLKRLFLHAESIRF--PLEGQTLYFEAPLD-
>UniRef50_B6IQX5(100-310:336) Pseudouridine synthase n=1 Tax=Rhodospirillum centenum SW RepID=B6IQX5_RHOCS  E=1e-48 s/c=0.92 id=40% cov=93%
---------------VLFRDHDVIVLDKPAGLATQGGTNQvKHLDAMLDALKFEaEGRPKLVHRLDKDTSGCLVLARSAAAAAKLTAAFRSREARKIYWAVTVGVPKPMKGRIDLPVAKEAGTRGeRMTVDEDEGVHAITYYTVLEHAHKQAAFVALWPRTGRTHQLRVHMAALGTPILGDGKYAGQgaflEGAGDLPRQlHLHARRIILPHPRGG-VIDVTAPLP-
>UniRef50_B9YDX4(79-287:295) Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDX4_9FIRM  E=3e-48 s/c=0.92 id=28% cov=93%
--------PWAIPVRILYEDELILAVSKPAGMIVHPdnkGKTGTLANAVAAYYLRTGQHCtvRPIHRLDEGTSGIVLFSKCPFFQPKLDQALAQKQIARTYLAVVSGVMKPkDRLTLDKPIGRDRHNAKAYRI-SPTGKPAVTHVEVLRcRQKEKQTLVRCQLETGRTHQIRVHLASIQRPVVNDPLYNPRPVQG---RMKLHAWKCAWTDLVSGRQVEIT-----
>UniRef50_D0LU78(102-341:369) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU78_HALO1  E=4e-48 s/c=0.80 id=35% cov=96%
-------PPCPRTIGVLYSDPHMLVIDKPAGLPVHaSARFYFNTLTRVLGERFPGQPMQICHRLDRETSGALVVARGKPEAARLKGAFADKRAHKTYLALVWGDPPWPDGawdsapeddaIIDLPLGlvADESARIKIRMeVRAGALPSLTRVRVLERRG-RAALVRCLPLTGRQHQIRAHLAACGHPIVGDKLYAHGDdvfaaycdrgmtpellERVRLPRQALHAAAIALPHPFEGRQVRAESPLP-
>UniRef50_Q39Z12(1-224:270) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q39Z12_GEOMG   E=4e-48 s/c=0.86 id=37% cov=94%
-------------MEILYRDEHLVAVHKPLGLLVHRSPIDRHETRFALQEVRDLlgRRVYPVHRLDKPTSGVLLFALDPAFARGLVGAFASGSVTKTYLAVVRGTM-PEEGVIDHPLAEEPDRfeQGRGNAGERAPQSAVTGYRRLadvelpvavgRYPTSRYSLVSLSPRTGRRHQLRRHLKHLFHPIVGDTKYGEGRHNRFFReelltvRMLLHAVELTVPHPATGAPLTVCAPVE-
>UniRef50_A8F4Z7(80-282:294) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A8F4Z7_THELT   E=7e-48 s/c=0.95 id=34% cov=86%
-------------LDILYEDDNLLILNKKAGITIHPSEKTRSTTLiqgLHFYGAKKGFKPHLVHRLDRDTSGVLVIAKNVKTARTLSHMFRNRLVKKEYITLVSGKI-FGDGFIDKPL---------------DGSEALTEYKVLENFRD-TSLLRVILHTGRTHQIRKHFALIGNPVVGDILYGDKKVNELFKkkhnlrRQFLHCIRISFTNPSEPGVISIKAPLP-
>UniRef50_B3PEU4(122-334:349) Pseudouridine synthase n=18 Tax=Gammaproteobacteria RepID=B3PEU4_CELJU  E=7e-48 s/c=0.90 id=30% cov=93%
--------------SVLFENEGLLVINKPPGLAVHGGSGVNLGLiETLRQMRPEARYLELVHRLDRDTSGCIMVAKKRSYLRHLQAALRdkvEGQIEKVYCALVVGHWPARLHQVNAPLLRTEVGaDERYVRVHPDGKPSLTLFNVIQRY-QGFTLVEARPVTGRTHQIRVHARHAGHGLVGDEKYGDDDInlhmrNQGIKRLFLHASSLGFCLPGEAQMTWVEAPLP-
>UniRef50_Q3A3D8(47-277:301) Pseudouridine synthase n=2 Tax=Desulfuromonadales RepID=Q3A3D8_PELCD  E=8e-48 s/c=0.83 id=33% cov=93%
--------------HILLRDRYLVVVNKPPGINSQPTPARYKGTLYEALLRllddpynkGRKPSLGMVQRLDRDTSGVMIFSIHARAHKSLSDIFAARRVQKHYLALVAGCMQAPQGEFRSLLARQHRTNLMKSVAR-GGKEAVTRYRVIEKFGD-AELLEVEIPTGRSHQIRVHFAEAGHPLLGDIRYGGPDRWRGvdVPRQMLHARRLELLHPISKEPLNIEAPLP-
>UniRef50_Q2LVB7(105-310:324) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVB7_SYNAS  E=1e-47 s/c=0.93 id=28% cov=92%
------------PFPVLFEDQHVIAVEKPVGIATFSADGSASVQWIVAQALKEHSRGKIhafaVHRLDKEVSGVLLFAKSKMAMDHIKEKWKE--AEKRYYALVEGKPESPDGTIESWLVEDHAQKVHSTRESSKAKFSVTHYRIIKQV-NQYTLLDVKLQTGRKNQIRVHLSDIGCPIAGDRKYGAAA--DFVRRIRLHAYYLSFPHPVTGERISIESPMP-
>UniRef50_O66114(7-211:219) Uncharacterized RNA pseudouridine synthase ZMO0505 n=10 Tax=Sphingomonadales RepID=Y505_ZYMMO  E=3e-47 s/c=0.93 id=34% cov=92%
---------------VLFIDAEAMIIDKPAGLPVTSVRDGSlSLENYLASLCFGFKRWpSIVHRLDRDTSGCLLLARNPKMHRRLSEAFSQGQVKKCYWAILEGVPEKNEGIIDLPLLKiSSPKSGWRIVADDKGKRAVTHWEILAKNKGR-SLVAFRPETGRTHQLRVHAAtGLGLPIVGDPFYGSHKDENIS-RMMLHAHSLEIAR-LEKKPITAEAPLP-
>UniRef50_Q7UUI8(80-303:321) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UUI8_RHOBA  E=4e-47 s/c=0.85 id=33% cov=95%
---------DDRTFEIVFEDEHIIVVNKSAGTLTVPTDRGE-PNSLVDRVsiylsySKSKKEAFVVHRLDRETSGLLVFGKHEPIADLLIEQFKDRRPTRVFHAIVAGNVSEDEGTFESHLATGSNLDRYETRPGKDTDQAITHYKVVRRLAEResshgeeTTLIEAQLETSKRNQVRVQFANAGHPVLGDPRYKPKEathARWHRKRMALHASTLGFFHPVSGEPVNFDTPLP-
>UniRef50_A8RDU5(91-296:317) Pseudouridine synthase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDU5_9FIRM  E=5e-47 s/c=0.92 id=28% cov=92%
------------PLSILYEDDLFLIVYKPSFMLVH-SDGNETETTLYDIVKGYYLLQGLdipvraIHRLDKETSGAVIFCKIPLLQPLLDYMLQEKQIDRQYLALC-AKVLNDDLTIDKQIGRDRHNAKKMRI-SKQGKSAKTDVHVIAQYQD-YTLIACKLYQGRTHQIRVHLASITHPLLHDTLYGNYDKR--INRCALHAYRIQLCHPFTQQNITIECPLP-
>UniRef50_B9JWI8(98-309:330) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JWI8_AGRVS  E=6e-47 s/c=0.89 id=37% cov=92%
----------------LHEDEKVFVLNKPAGLAVQGGSGlNRHIDQMLeAWTSKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWALVKGVPRKHDDKISTWVVKeqteDGDRMRIARHGEDGADHAVSYYRVLETAAQSLAWLEMEPYTGRTHQLRLHALHIGHPIIGDPKYYIDDPNWDFPggvqkRLHLHARHIDIPHPDGGR-LRITAPLP-
>UniRef50_B0U5V6(104-319:330) Pseudouridine synthase n=7 Tax=Xylella fastidiosa RepID=B0U5V6_XYLFM  E=7e-47 s/c=0.88 id=32% cov=92%
---------------IVFEDARLLALNKPSGMASHGGSGVSYGVIEAMRILRPKQELELVHRLDRDTSGLLIMAKKRAALIELQALMREasvngkegRGIAKRYLTLLSGRMPNGVMSVDAPLHINLRHGGeRHVRVHHDGKPSKSRFRLLERRGGQ-SYCEVLIETGRTHQIRVHAQHLGHPVTGDDKYGDQEVNRklrdqiGLQRLFLHAVSLEFALDAGSTPYVLNAPL--
>UniRef50_D2LES8(95-307:326) Pseudouridine synthase, RluA family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LES8_RHOVA  E=7e-47 s/c=0.89 id=35% cov=93%
--------------MIVFENDEMFILNKPFGIAVQGGtKTTRHIDGLLAGMadRFGGERPRLVHRLDRDTTGILAVAKDRQTAARLGRLFQTRSVQKIYWAITRGIPKPTQGKVEAALVKaSGPDGDRVRKARPGeqelAQHATTFYSVIDRAA-NMAWVSLKPVTGRQHQLRAHMDILGTPILGDQKYGDGTEipiENIERKLHLHARRLTLKDPKLGE-IDISAPLP-
>UniRef50_C8W9Q3(10-233:246) Pseudouridine synthase n=2 Tax=Atopobium RepID=C8W9Q3_ATOPD   E=1e-46 s/c=0.84 id=31% cov=92%
-------------LEFLYQDDYLLAVNKPAGMIVHSDGTNEpsLTDLVCEKLCAlessnkiDLSQVQALNRLDKETTGIVLFSLKKETQPQFDQLIASKELSKEYLAVVKGDFGLNKLLIDKAIGKDRHDAQKMRI-SDTGKPSQTEVRLIKVASSAqgqiQSLLLVNLLTGRKHQIRVHLSSLGFPLVGDVLYGGmsslqrkTKKKHRPQPLMLHAYRIGFIHPVTGAKIVIK-----
>UniRef50_Q6MDB9(67-285:298) Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDB9_PARUW  E=2e-46 s/c=0.85 id=32% cov=90%
---------------ILYEDEDLFIYDKPAEM-------NCDEQGIIALLRPSFPSIQLIHRLDRQTTGVLALAKNKTTFEALVNQFKQLKVSKSYRAIVDGILTSSKGHIENYLGKKHvyqGQSIWGEVPSFQGLYASTYWSCLE-IGKKASLVRCFPKTGRTHQIRVHLAGLGHPILGDYQYGKKfTCLYNPPRYLLHAEEMGFIHPRTRQKLIVQAilPEDF
>UniRef50_Q47Y03(8-289:304) Pseudouridine synthase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y03_COLP3  E=3e-46 s/c=0.66 id=32% cov=100%
VAISEDIEPEKPVLDILYQDEYMVAVDKPAGLFVHRSYMDKDEIYFALQLVRDqvGQYVYPVHRLDRPTSGVLLFALTKDVATKLSEAFANKSsqaefksdtelegkvhdktqtgqqgqqsmteglttdknidgsdlaMVKTYYALARGHLAVPVDLIDHPLKEKLDKLGDKNVSRDKpAQSAQSYYQVKQqaslpikvgkFDSVRYSLIEVRPITGRRHQIRRHLAHLRHPILGDINYGDNKQNpffiehFGFKRLMLIAKSLEFNHPINNDRIKISAPFD-
>UniRef50_Q6MJF7(9-219:230) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJF7_BDEBA  E=3e-46 s/c=0.88 id=32% cov=94%
---------QPRGFEILHEDLDVIVGNKAAGVLTVAAKWDRDNtvhNLLNLYVRKGNPRsnkcVYVVHRLDQATTGVLIFAKTEQVQHFLKDDWKS--TIKTYYAIVHGKMPKKSGTITSYLEEDENYVVHSSKDSDKGKLAITEYEVLK-ETEKFSLLKINLLTGKKNQIRVHLAGEGHPIVGDPKYGKPTTNLKELR--LHSASLEFTHPHSKKRITIKAPVP-
>UniRef50_B1CC12(97-295:305) Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC12_9FIRM  E=2e-45 s/c=0.92 id=33% cov=88%
------------------------VINKKPGMVVHVTKSHP-LDTLQNAiyhkweIEKKHFKTRFVNRLDMDTSGIVVIAKNKYVHHFIQNQSINNQIDKKYVLIVDGIMDQKEGYINAPIKRAEGHPLR-RIVAEDGKECITKYKVIEEFKNH-SLVEAKLITGRTHQLRVHFSYVGHPILGDSLYNENKSE-LISHQALHAKSISFVHPRGNKPMTFEAELfdDF
>UniRef50_C2ELY9(80-297:310) Pseudouridine synthase n=10 Tax=Lactobacillus RepID=C2ELY9_9LACO   E=3e-45 s/c=0.84 id=32% cov=94%
-----LKPSSNPVKPVL-ETKNYIVLDKPAGVLSIPSRYEDN-DAIVNRLMGYFAkknmsnlKPHVITRLDRDTSGLVLVGKNAIAHARFSKIGKEKFVKK-YHAIVHGNFSEDKltGVIDAPIGK--KGSGVKRAVVEGGKKAQTKYRVLKQVS-GASLVELRLLTGRTHQIRVHMAYLGHPLYGDHLYG---IEDDFSRQALNCFYLSFPDPFDNEKikeISIEEPTD-
>UniRef50_Q2IJ07(8-224:241) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=Q2IJ07_ANADE   E=1e-44 s/c=0.83 id=36% cov=94%
------------PVAVLHEDAALLAVDKPAGRLVIPGR-EGGEPSLREELEARFGRLWVVHRLDRNTSGVLVLARTAAAHRALNLAFDRGEPRKRYLALVRGVP-PAEQRIEVAIAPARKGRMRPAApDDPRGKPSATVVRRLEAYpshplgGGPLALVEALPETGRTHQIRVHLAAAGTPLALDPAYGdaapllGPGGEPVLARTPLHAARLALRHPADGRELVLEAPLP-
>UniRef50_C5ZWU1(60-276:319) Pseudouridine synthase n=2 Tax=Helicobacter canadensis MIT 98-5491 RepID=C5ZWU1_9HELI  E=2e-44 s/c=0.83 id=30% cov=94%
--------PNHLNIPILYEDEDLLILNKPINLIVHQTHQDDSQYTLQDWLQEnnfslsnlgDSYRQGIIHRLDKTTSGAIVIAKNNYAHEILSQQLKSKEMGRYYVCV-IDSPLKQNILIDAPLIRHPKNRLKYIPTTKDtplSKEAKTAFFKI-INNDKIELIGAKLFSGRTHQIRAHLSKIQRHILGDVFYGYK--GNYTARILLHSHLVYLTHPTTKQRLEIYAPL--
>UniRef50_Q1JVY6(76-278:295) Pseudouridine synthase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVY6_DESAC  E=3e-44 s/c=0.89 id=34% cov=91%
------QPSLEQQLFILYESREILIVDKPSGLAIHSSEGHQDRNLAalvdeLIRSRGDAYQVAPIHRLDLETSGPVLFGKGKKACSELGKLFMCHEVEKSYLALVAGK-TPGRGLIQS----EVPSKGKT-------KEAQTAFQALDR-NEQASLLKVTLYTGRQHQIRRQLAELGHPLFGDRRYRGQQPDA-LPRLFLHCCQLAFIDPFSGAPVEINSPLP-
>UniRef50_C7H3U7(72-280:305) Pseudouridine synthase n=2 Tax=Ruminococcaceae RepID=C7H3U7_9FIRM   E=4e-44 s/c=0.86 id=29% cov=92%
-------PQPEIPVRVVYEDAFAVVLEKPPHLAVHPT-LNYPRDTLANGyaawavAHGESPVFRPVNRIDKDTSGLVLAAKNGYAAPLLAE-----GVEKLYYAIVEGELPLGPGVIDAPIGR-RGDSIIGRCVTPEGKPSRTEYTIL-RAAQGLSLAACVPVTGRTHQIRAHFASIGHPLAGDDLYGG--HRDRIARQALHCARQSFRVPAYTEVpggIRLETPV--
>UniRef50_C6JLM4(69-281:289) Pseudouridylate synthase n=2 Tax=Fusobacterium RepID=C6JLM4_FUSVA   E=5e-44 s/c=0.84 id=29% cov=94%
--------PMEIPIKVAYEDKNILLIDKEPYIIVHPTQKKVDKTLangVVNYFLKTTRKimvPRFYNRLDMNTSGLIIVAKNSYAQSFLQE---KGIVNKFYKAIVKGIIEKDEFLIDKPIGKVGDDlRRREISVENGGQEAQTKIKVIKRLKD-LTLIEAELLTGRTHQIRAHMALEGYPLLGDELYGGEDKR--AKRQMLHSYKTQFSDIETGElkTVEIDIPDD-
>UniRef50_UPI0001C353AC(5-218:239) putative pseudouridylate synthase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353AC  E=8e-44 s/c=0.84 id=34% cov=91%
-------------MNILYEDDQIIVVEKPAGIESQSSRTFEpdmvsevkkHINSLSP--KKGDPYVGVIHRLDKPVGGILVFGKTKEAAGALSKQISEHQTEKRYLAVVCGKPVENFGTYVDYLWKDGKNNISKIVDKgiTDAKRAELSYRVlaeLEGEGGPLCLMEIDLKTGRHHQIRVQLSGHGTPLLGDLKYNPDGPKVTGQRnVALCAWKLSFTHPGNKKRMKFT-----
>UniRef50_A4E9L1(1-203:205) Pseudouridine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9L1_9ACTN  E=9e-44 s/c=0.88 id=28% cov=88%
-----------------------MAIDKPAGMIVHGDGTGERTLTdyasdLLLAMGDGFAatDMQPLNRLDRNTTGVVLFSLDKQTQPAFDQMVNDHAFEKHYLALAEGKIDWNEKLIDKPIARDRHDSRKMRV-GASGKPSQTRVKVLKRLKSRrglptRSYIDVELLTGRKHQIRVHLASEHHPLVGDDLYGTARPCG----LMLHAHSVSFTHPVTGEHIHIEAPCPW
>UniRef50_Q8EWS1(67-289:298) Pseudouridine synthase n=1 Tax=Mycoplasma penetrans RepID=Q8EWS1_MYCPE  E=1e-43 s/c=0.80 id=24% cov=94%
-------------IEIVYEDKYILIVNKPNDIIVHPTSYD-LSNTLANIIKYifdskkikyngDPLRMGIVHRLDKCTEGLVIVAKSLDSFNAFTKLFLDQKIEKKYLALLHNHLQTRTVEVDAPIKRVETSTRREVSRDIDAKEARTIFKEINKY-KNFTLAEVELFTGRTHQIRVHAEFIKNHVINDPIYGPKHINKTTKyGQYLVAYKLKFIHPFTQKEVNINLdmPKEF
>UniRef50_B7KI53(76-303:308) Pseudouridine synthase n=12 Tax=Cyanobacteria RepID=B7KI53_CYAP7   E=2e-43 s/c=0.78 id=29% cov=97%
-----WEEPSAPlNFDLLYSDSDVLVVAKPAGLPILPG-GGFVEHTLLGQLKQHYPEdtPFPIHRLGRGTSGLVLLARSSFARGFLSEQMRSRQISKIYRALIPKSDLTDHFTINQPIGKIPhPVLGYIFGATPNGKDALSECRVLKRTSE-TTLVEVKILTGRPHQIRIHLAAIGYPLIGDPLYtmgGIPKIQTPITPeklpvpgdcgYYLHAYQLTFNLPHRESPLTVTCPPP-
>UniRef50_C3YH76(83-263:369) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YH76_BRAFL  E=3e-43 s/c=0.97 id=34% cov=79%
-------PPVVAdPVQIVEETDDLVVINKPASMPVHPcGGYRHNSVIFVLGKEHGFQNLHPIHRLDRLTSGILIFAKNLETKHRLDAQIKGREVKKVYLARVEGEF-PEKAECDKPIFAVKHKLGVCRVCPE-GKPAKTTFERVSFDGK-SSVVRCFPETGRMHQIRVHLQYLGHPIVNDPLY--------------------------------------
>UniRef50_A1K5H7(2-225:260) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=A1K5H7_AZOSB   E=4e-43 s/c=0.79 id=36% cov=94%
-------------LEILYQDEHLVAIHKPSGLLVHRSALDAHEERFAVQLLRDqlGRHVHPVHRLDKGTSGVLVFALDRDTAGRLATQFETRAVRKQYVAIVRGHPAEA-GTIDHPLSRRFDPVEHVAEDKVFApQPAITRFRRLataelpwavdRYPTSRYALLALEPETGRRHQIRRHLKHISHPIIGDSTFGKGKHNRmfqahfGSERMLLACTDIELRHPQRDAPLQLHaAPAP-
>UniRef50_C7NFK5(79-313:316) Pseudouridine synthase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NFK5_KYTSD  E=4e-43 s/c=0.75 id=36% cov=96%
-------EPEVPgGLPVLQADEHCVVVDKPPFLATIP-RGVHVQQTVVARVREDFPEAVPVHRLDRLTSGVLLCARTPEARRPLQQLFEKRQVAKTYEALVSLPPEEAAGafsvspgveglglaeRVERAIGEQEHHLVKKRgsqqvVVVPGPPNALTRIEVVEVDeATGRARLRLFPHTGRTHQLRVQLAHLGLPIVGDPLYPVQTEQvtgDFSTPLQLLATRLEWTDPWTGKARRAESRSP-
>UniRef50_Q1PXB6(67-265:274) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXB6_9BACT  E=5e-43 s/c=0.88 id=31% cov=89%
------HQPEKKTYDILFNDDCYVIVSKPPGIVTNGQNSIERD----LRTQFNRDRIQAVHRLDKDTSGALIFAKNENAFEEMKKVFKKHDIQKIYRVIVTGKICEPAFTINSPVG---------------GQTAVTHITLLK-KGKNTSYLEVATETGRRHQIRIHLASIGHPVIGETEYARKEIenilHREAKRQMLHAHRISFVHPYTKKEISVTAPIshDF
>UniRef50_A8S647(84-305:316) Pseudouridine synthase n=3 Tax=Ruminococcaceae RepID=A8S647_9FIRM   E=7e-43 s/c=0.79 id=31% cov=91%
--------------QVVYDCPQILIVNKPAGVAV----DGPEDDTLLNRALLYLNKQGeykendlytpaLCHRLDTGTSGLVIIAKTPEAEELFLSAIKNREVQKTYLCVTFGRPMPPDATLGGYLLKDADRGIVKIVedKQPGAKEVETRYETIAVSG-RLALLKVQLITGRTHQIRAHMASIGCPILGDSKYGNNSANRelKLKYQALCAWELtmpRFTQPdfafLSGK--TFHAPKPW
>UniRef50_Q11Q54(1-231:242) Pseudouridine synthase n=7 Tax=Bacteria RepID=Q11Q54_CYTH3   E=3e-42 s/c=0.75 id=27% cov=99%
MLLDSTEQPHDPiqefehFFTVVFEDNHLIAVNKKNGVLVQGDDTGDkpLSELVKEYLKKKYNKPGNVfagviHRIDRPVSGLVLLAKTSKALERMNKQFADKKIQKAYLMVSGSKPNPASAKLVHWLTKDAKRNIAKAHTSEvkESKYCELSYSLL-TSSDRYFLIEVKPVTGRSHQIRCQMASIGCVIKGDLKYGAPRSNPDG-GICLHSHKLSFQHPVTGDNMQLKADPP-
>UniRef50_A1VXA1(69-276:300) Pseudouridine synthase n=18 Tax=Campylobacter RepID=A1VXA1_CAMJJ   E=5e-42 s/c=0.83 id=33% cov=86%
--------------EIVFENEDFAILEKESGILSHP-NGRHCKYSLSDEIWHLWGKEACVaHRLDKETSGLILIAKNKKAQIDLKSLFEKKLVQKEYLALAHGKIEENFIVDKAiNLTKNYDDVKTRMQICKEGKQAITEFEILEYFPKiNATLLLCKPLTGRQHQIRVHLHYKNHTILGDPLYGlskqqiesildeklNPKERLKLTgalRLCLHSYRLKF-----------------
>UniRef50_A4ANB8(102-300:308) Pseudouridine synthase n=3 Tax=Flavobacteriales RepID=A4ANB8_9FLAO   E=5e-42 s/c=0.87 id=35% cov=86%
------------PLKMLYEDEHLAAIHKPSGILVSGNSFKTITHALSQNLepsnLPDSTLPQPVHRLDYATTGILLIGKTSSVIRALNGMFERKEIKKTYYAITMGKM-EIRGEVTLKI---------------DNKNAQSKYVVEETVPserfGQLNLVKLTPITGRRHQLRIHMSGIGNPILGDSDYGTKDLILKGKGLYLHAYSIEFNHPYTNEKLLIKS----
>UniRef50_C4PLV8(72-268:274) Pseudouridine synthase n=13 Tax=Chlamydiaceae RepID=C4PLV8_CHLTZ   E=5e-42 s/c=0.88 id=30% cov=86%
----------------LWEDEHLCIYNKPA---------KQTSEDLAHQL-----NVHLVHRLDRDTSGCILFAKHAKASSLITQLFKNPEIDKRYIALVFGQPRQESGIIttyTAPCYRRTGAVLFGNTDQNSGKITITKWEILTRYPK-YTLLLCRPVTGRTHQIRLHMKTIGHPIVGDVDYGNQEQPKNVVRTLLHAASLAFISPFSNEKIEVSSltpsqdPYPF
>UniRef50_Q6MMV3(44-266:290) Pseudouridine synthase n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MMV3_BDEBA  E=3e-41 s/c=0.76 id=34% cov=95%
-------PPGERTLvELLYKDEYFIAVNKPSGFHVHPHENVQHRVSrdkicLYHARRMMKQHVYPVHRLDAGTSGVLLFALSSESASKLCRLFTERATHKTYQAVVRGFVKE-EGEVQLPLELDSTGDLVDAHTSFK-RLATVEFPVAvgkKFPTARYSWVEVTPHTGRYHQIRRHFNRISHPLLGDAVHGDSHHNRFfrnhleIEGLCLKALRLEFTHPWSGEKVSIEAPP--
>UniRef50_C0GQU7(80-290:318) Pseudouridine synthase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQU7_9DELT  E=4e-41 s/c=0.80 id=29% cov=92%
------DPQRAGELQIVFENPDFTVLDKPAGVPVHSGTSAR-RDNMVLRLRKHYagadFSPALVHRLDKETSGLLLAAKNYAWLRRIQAMWNKNLVEKTYLAWVHGSWPSRWVNLEHRLIKTFEK----MQPSPEGRPALSRVRSIASSRDKT-LVQIRIITGRTHQIRTQLSLSGHPVIGDGKYGKDSGYAE---MYLHAYMLAwpghvFCLPpgWTG---DFTTPGD-
>UniRef50_A9B0U7(57-286:312) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0U7_HERA2  E=5e-41 s/c=0.73 id=31% cov=97%
-----YANPVVTPADILFEDEWILVLNKPAAWYSVatPWDTFGHLEGALQRffLERDGEavPFHLVHRLDHGTSGALIVSKNPSLNSRFQRMFNEGRVQKTYLALCSGLPDWTKLEVVTGHSRGEFGLwsvyPAAMIDQLYGpkdrrvRRAHTSFTV-QAVGNAAALLAARLHTGRTHQIRLHAKHIGHPLVGDQRYGGVTQfgNLSIPDQLLHAAWLQFPHPRYGSMLELIAPVP-
>UniRef50_Q041R0(86-281:285) Pseudouridylate synthase, 23S RNA-specific n=28 Tax=Lactobacillus RepID=Q041R0_LACGA  E=6e-41 s/c=0.86 id=34% cov=89%
--------------KVVYEDSDILVIDKPTGQKTHP-NLDEKDTALNDCATYLGYSPFIVHRLDMLTNGLLLVAKNPAVVPILNRQLTNKTLHREYLAWVSKsNQLKQSGTISLSIGHDPDDQRKRMVRL-DGQKAITHYEVIK-ECENKELVKLTLETGRTHQIRVHLAALGAPIIGDPLYNPNYQNG--EKLQLTAYQLTFMGPFKFESKTVK-----
>UniRef50_A9HEJ0(11-209:227) Pseudouridine synthase n=10 Tax=Acetobacteraceae RepID=A9HEJ0_GLUDA   E=1e-40 s/c=0.84 id=29% cov=91%
------------PFPVLFRDNRFIVIDKPPGLPVHPGpSGGPSVEDSFPLLSRRADGPWLAHRLDRDTSGCLLIALRKQALLAAQAAFAAGQVRKTYWAVVQGRPAADSGTVAMTMARHSDRQGWRMVAAPDGQASRTDWRVLASDG-RESWLELHLLTGRTHQARLHCASLGCPILGDPVYGGAEGPT----LHLMSRHLAL--PLSP-PVSATAPPP-
>UniRef50_A4A1L7(2-226:250) Putative 23S rRNA pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1L7_9PLAN  E=1e-40 s/c=0.75 id=30% cov=95%
-------PPAN--VDILYEQGPCFCIAKPAGLLTQaPPHIDSLESRFKAFIRQRDFKTGKVylgvpHRLDRPVSGVLTFARNVRAARRISQQFETRLVRKLYWAFVAGQPPDDQGVWEDPIRKIPDVAMAEIVspSDPGARWAKLKYEVLQRTEQG-AWLEIELDTGRYHQIRVQCASRGFPILGDVSYGGEipfgpqSEDERARHIALHARYLRLKHPMVDEIVAVTAPLP-
>UniRef50_B2S2H8(1-207:216) Pseudouridine synthase n=2 Tax=Treponema pallidum RepID=B2S2H8_TREPS  E=1e-39 s/c=0.80 id=31% cov=90%
-------------LPIIFQDAAVVAVDKPAGLAVQPGA--RVRVCVVDVLQKQLGvRLFPLHRLDKDTAGVLLFAKHARAAALYQGILGSMRVIKRYRALCFGRPPRECGDIRVPIRTGTAARRRQVV-----RAAHTAYRVL-RATDTHTYLELTLHSGRTHQIRIHLAALGCPIIGDDKYGDFARNKacarawGVKRLQLFAHSLVL--PCACKPLVLRArmPVHF
>UniRef50_C3ZJW0(1-231:244) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZJW0_BRAFL  E=2e-39 s/c=0.71 id=33% cov=98%
--MLNGERPPFSTVEVLYRSGNFLVVNKPYDV-VLNWDDPSRTDTLQHLLQERFPdlvdqslkhCFRFVHRLDYSTSGPICIALNKKAAGHAGKAFSQKQVIKQYLALVRGHISEDHLSINKAIGEQGTPDAPVPMCVEGTpgcqhlRDAVTQLTVVEkglYEGQPATKVNLCPMTGRRHQLRVHCQSIGHPIVGDYTYSCRQ-DTTPYRMMLHAQRLVI--PLKGEVIDIETDDPF
>UniRef50_C0FY60(59-270:294) Pseudouridine synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FY60_9FIRM  E=3e-39 s/c=0.77 id=29% cov=87%
-------------LQVVYEDDDVIIINKPSGMLSQkavPEDISANEYILSYLIRKGalseeqfkTFKPSICNRLDRNTSGLLIAGKTLKGLQTMAEALKKRTVQKYYRCIVKGELREKTHL-KGYLSKDEQNNKVKVVSHirpeekADYLPIETEYRPVAV-SNGYTELEVHLITGRSHQIRAHLASIGHPIVGDGKYGDLRTNERFRKevhvrsQLLHAYRIVLED---------------
>UniRef50_A6DTB9(82-284:290) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTB9_9BACT  E=4e-39 s/c=0.80 id=29% cov=91%
--------------QILYEDENLLLVDKPHFLPIHPA-GPYVKETLVYRLREsqNNPDISPLHRIDRLTAGLVFFSKKVSIRKDYQLLFENRLVEKTYHAISAG-PAPDQGYWHLK-NRIEAGEPWFLSAIKEGKANSESYINVIEAKDNLVKFELKPISGKKHQLRVHLASIGYPILHDPLYPSfveKPPDNYEKPMQLLAQSIAFTDPFSKKRHSFQS----
>UniRef50_C7RHG0(79-285:318) Pseudouridine synthase n=4 Tax=Anaerococcus RepID=C7RHG0_ANAPD   E=5e-39 s/c=0.79 id=25% cov=87%
--------PSDFDLDIVYEDNNIIIMDKKSGLLTHSSSKKDYGNNLVDNMLHYLyktksfdmsdrtFKPAVVNRLDRNTAGLVIGAKNAESLRSLNKAIRENKIDKFYLTIVKGYVEK-EFSIDTHISKNDNRNRVSK--SRNGKRIKTNFKPLETNKK-FSLLECELITGKTHQIRFSLKENSTPIIGDRKYGDRNTNQKLRKfginnQILLAYKIRF-----------------
>UniRef50_C3PKB5(122-345:353) Pseudouridine synthase n=7 Tax=Corynebacterium RepID=C3PKB5_CORA7   E=5e-39 s/c=0.73 id=29% cov=96%
--------PVPYDIPILFEDEHLLVVDKPPFMATMPrARHITETATVRLRRKTGNNELSPAHRLDRLTSGILVFTKDRSVRGAYQTLFAERRVTKTYEAIAPLADVSPGTVWRSRMEKTPGELQGRIV--EGEVNAITEvaavepidkapYESIHGSLPELAKYTLKPQTGKTHQLRLHMLQAGVPIIGDPIYPvifPAEAEDMRIPMHLTATHISFVDPLTARPREFFSQLPF
>UniRef50_B7FU02(1-240:240) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU02_PHATR  E=1e-38 s/c=0.67 id=42% cov=95%
-------------LHILYCDEHICVVNKPSGILSVPGPRRNPSIANLVYEILNPPidiDQMVVHRIDMDTSGVLVFALTELALRQLHDDFRSRRVKKTYEALLAGHFRKATQVeIDVALERDPYHPPFMRRYWEPQRSATYSrqfsqiYQPSAQAHLPVSRVHMSPHTGRTHQLRVHAAALGYPIIGDDIYGFEGEGDcgvnstildqlIPNRMslhqqlqelqlplCLHAKQLCIFHPFSGAPMIFECEAPF
>UniRef50_B0N6U2(86-298:328) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0N6U2_9FIRM   E=2e-38 s/c=0.76 id=29% cov=86%
-------------FSVLYEDKHVLIVFKPAGLLVHedaNESINTLTNQVLSYLaskneldlsRENTFMPGPVHRLDRNTSGIVIFGKTLAALQNLNEMIKQRHcIEKKYLTICRGQLNHQR-NLHGYMIKleNQAQVKLVKKDYPGALTMETIVRPLKYNCD-YSLVEVTLITGRMHQIRVHLSSIEHPIIGDRKYGDFELNKYIKKtfglnnQLLHAYKIKFV----------------
>UniRef50_Q1N0K9(1-183:223) Pseudouridine synthase n=1 Tax=Bermanella marisrubri RepID=Q1N0K9_9GAMM  E=3e-38 s/c=0.87 id=33% cov=82%
-------------IDIVYEHQDWILVNKPEGVdfHSQNGEVGFHR-QLCDQL---GFNVFPVHRLDKATSGLLLFAKSQDACRGLVELFSQRKVEKYYLAIVSNKLKKKQGKVFGDMVKSR--NGSYKLTQERRNPAFTQF-LSQALKPGYRLALLKPKTGKTHQLRVAMKSLGSAIVGDQRYGGESAN----RLYLHAYALKFD----------------
>UniRef50_Q9VKU8(215-393:547) RluA-2 n=6 Tax=Sophophora RepID=Q9VKU8_DROME   E=3e-38 s/c=0.89 id=32% cov=77%
------------PIKIVYMDKDIVVVNKPASIPVHPcGRYRHNTVVFILAKEHNLKNLRTIHRLDRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGRFPDGIVECNEKIDVVSYKIGVCKV-SPKGKDCKTTFKRIGEVGSD-SIVLCKPLTGRMHQIRVHLQFLGYPISNDPLY--------------------------------------
>UniRef50_A8TF58(100-362:372) Pseudouridine synthase n=1 Tax=Methanococcus voltae A3 RepID=A8TF58_METVO  E=4e-38 s/c=0.60 id=27% cov=95%
------------PMDIMYEDMDILVVNKPKNMVVHPTKTIKSGTLANAIMDYQNHnkseserfKIRFINRIDMDTTGIVLIAKNSFAHQKIANQFQ-GCMKKEYLAVISGNMdvdnldtnlnnsldtelnnnlndEKYNLPLNLRLKIYKENNSKFSVIifdrDTDELIEHTNFEIIKNTKDtkdnkdnkdteisnNFTLIKASLITGKTHQIRRHLAYLGFSIVGDELYTNNNElndNFKNYSLMLHSYKTTFIHPRTNELIELieEPPKDF
>UniRef50_Q2S1S0(1-207:232) Ribosomal large subunit pseudouridine synthase A n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1S0_SALRD  E=6e-38 s/c=0.77 id=34% cov=92%
-------------MTILHRDEHLLVVSKPPGLLAQPDQTGDpdvvsRGKEMLSDETEGAPFLGLVHRLDRPASGVMALARSPEAARELSRQFRERLVEKRYVVAVEGTL-QGIGAWTDYIAKPDRQPRLVDPDHPEGKRAALDWQVLESSSAHT-LLQVTLQTGRSHQIRLQAASRGHPVVGDDRYGASDS--LPDRaVALHHVLLRADHPARPRRETFVAPPP-
>UniRef50_A3DGV1(78-291:320) Pseudouridine synthase, RluA family n=3 Tax=Clostridium thermocellum RepID=A3DGV1_CLOTH  E=1e-37 s/c=0.74 id=24% cov=89%
----NY----ETAFSVAYEDSNLLIVNKKQGIPVHPDRT-QTENTLIDFVKEYLKlkgefeensgfTPSLCHRLDRNTGGLVMIAKNSSTLHMVLKKMKSGEISKYYQCLVKGKMEKKEDILKAYLEKDEKKSRVFIKDTksKNAVEIITGYKVLSYKelpdiGEGISNLEVTLYTGRTHQIRAHLAHIGHPVVGDGKYGINTFNRLlgAKYQALWAYKLKFD----------------
>UniRef50_Q1JXL0(69-287:294) Pseudouridine synthase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXL0_DESAC  E=1e-37 s/c=0.72 id=27% cov=96%
-----YREVEEQPLipfaeTILYQDDALLVACKPHFLPVHPGGRYVTENLVYrLRLATGNDQLAPVHRIDRFTAGLVLFAQRSEDRARYNALFSQGNIKKRYDAVAHCPEEPQQRHWQVANRIEQGDPWFRWQVVAGDVNARSSIELLD-LRQGYGLFSLQPITGKTHQLRLHMSGLGFGLVNDRYYPNllpEQPDDFSTPLQLLAKEVIFTDPVTGKHHHFESP---
>UniRef50_Q4PCI6(44-230:1096) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCI6_USTMA  E=1e-37 s/c=0.84 id=31% cov=81%
-------PPVtDEPIKIIHRDDDegILVIVKPGSIPVHaAGRYLRHTLVGLLQSEHGVDMVYTTNRLDRLTSGIMVCSTKKETASRLGAQFAAGQVNKAYVCRVRGKFPQGEVVCKQPILTIDRQSGVN-IVHPKGKHCETIFVRLSYdASDDSSVVFCRPITGRTHQIRVHVQYLGHPICNDPIYGHD-----------------------------------
>UniRef50_Q1IZY6(9-236:251) Pseudouridine synthase n=3 Tax=Deinococcus RepID=Q1IZY6_DEIGD   E=1e-37 s/c=0.69 id=29% cov=95%
-------PPTEKP-RVLVEHPDFYVVHKPALWLTHPVRARVDVPDVLSYMRAETgePDLAPPHRLDRETSGTQLLSRDPDAARRFFTLFKTHLVGKTYLAVVHGSPDWERYTLDAPLGdlglGGANRVIIRQAVVPDGRPAVTDFRVVEQRG-GFTLIEAYPRSGRLHQIRAHLSHLGLPLVGDKIYGPDPQAFLdfmhhgqtlelterllLPRQALHAARIAF--PWAGAQFAAEAPL--
>UniRef50_C5TJ50(96-303:307) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=C5TJ50_NEIFL   E=2e-37 s/c=0.75 id=31% cov=89%
--------------KILHIDEHLIVVDKPHFLPVIPsGRFLRETLLTRLRLRSELQHlnvedITPIHRLDKDTAGVMLLSLNPATRRDYQTMFQEKTVQKTYEAV-----APTRTDLDYPLdlssRMERGEKFFLTRETEGEPNAHTTIELIENRG-AFSLYRLTPHTGKKHQLRVHMMSLNMPLMNDALYPNPlaaGDEDYDRPLKLLAKRIEFTDPVSGEIRVFES----
>UniRef50_C0NWM0(112-351:545) DRAP deaminase n=10 Tax=Onygenales RepID=C0NWM0_AJECG   E=3e-37 s/c=0.65 id=31% cov=81%
-------PPVtSQPISIIHEDDDMIVIDKPAGVPVHPaGRYNYNSILEIMKAERGNGWvPYPCNRLDRLTSGVMFIGKHPKGAEQIGEKLRSRTVRKEYVARVKGKFPDGVVLCDQPMLKISPILGLNR-ARASGKEARTKFRRIAYYPphkqagkkqglsagpatppatlpdqmnisdsqtdtptgaaipvpmspdeEGYSIVHCLPLTGRTHQLRVHLQYLGHPITNDPIYSNRR----------------------------------
>UniRef50_A8SBU6(1-218:231) Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBU6_9FIRM  E=3e-37 s/c=0.72 id=32% cov=89%
--------------MILYEDAALVVLDKPAGL----SSEEGVPAALRAHWNAPDAFVGVVHRLDTGVSGLMVYARTPAAAAALSRQVTQSqdayavqdgraegkaaapQFVKQYRAIIAGAPDaqlPAAGVLRDYLFKDSRKGRVFPVSRPrkGVREAVLEYRILATAGEN-SLAEITLHTGRTHQIRVQFASRRHPLYGDGKYGSRQKGS----IALQSCGLRFVHPDTGKPMAFSLPLP-
>UniRef50_D1BPK0(124-372:372) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK0_VEIPT   E=4e-37 s/c=0.63 id=27% cov=91%
--------PIEMDLSVLYEDEDLFIVDKPSGVTV----NSKDRLSLANGVAHYFKEHGIkrkvrfLNRLDRDTTGCIVIAKSGLAQSLYQQQMDDNTFEKWYMATVEGIVEADEDTLVFPMERSAD--GIHYEVNAKGKETRTDFSVLCRhssqpvdnsvnksensvdiglknvdielvdvdknnlnvdktvyksNKCGYTEVLVRLYTGKTHQIRVAFSHIGHPLVGDTLYG---AQPTGQPFQLRAQKVVFTHIRTGEHITVMA----
>UniRef50_Q7NAY8(81-292:330) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAY8_MYCGA  E=4e-37 s/c=0.74 id=26% cov=89%
----------KPELDLIYEDENLVIFEKPLGIPAQqtdePSQYDHMQNRLVHYLVKSNQYDYlnnqaylpsIVNRLDTYTTGIMLGAKNLKAQQALNQIIKNRDLKKFYHCLVHGEINPKKATLTAYLTKDPNRSLvsIQKEKTNDNKIIITRYQTLYYFKKqNYTLLDVELITGRTHQIRAHLASINHPVVGDYKYAKKQyqnNQGNFKHQLLHSYKIIFD----------------
>UniRef50_A1U1A1(93-264:267) Pseudouridine synthase n=2 Tax=Marinobacter RepID=A1U1A1_MARAV   E=7e-37 s/c=0.91 id=33% cov=79%
---------------------------KPHGLLSQGSQWGDHCSLLRLAEIELNTPCFLVHRLDADAAGLMLIAHDGKAAAALSELFAGRAMTKIYRARVAGNLMADDLRLDTPL---------------DGKDSISRVTTLSRDEDsDTTDVQVRIETGRKHQIRRHLAGIGHPIVGDRLYGT----ASAAGLQLTAVELAFRCPVTRKAQVFRLPE--
>UniRef50_A0RRU2(64-315:319) Pseudouridine synthase n=2 Tax=Campylobacter fetus RepID=A0RRU2_CAMFF  E=7e-37 s/c=0.62 id=32% cov=93%
-------------LKPIFECDEFGVFDKPSGVLSHPN-GRNCEYSLCDEIWSLWGKKACVaHRLDRETSGVIVVAKNANSALNLKKSFENRAVAKTYLAFVRGKFDgngldkfhindfedfkdkleffdnIQGFVIDKnmDITKDYDDIKIRMEICPEGKRAVTVVKLVEYYPKfDISLVECYPLTGRQHQIRLHLFHMKHRILGDPIYGldkfnveqildgvmserDRVKNTGASRLMLHAKSVKFK--FKDQVFEIRSEQDF
>UniRef50_Q28C59(50-299:324) RNA pseudouridylate synthase domain-containing protein 4 n=1 Tax=Xenopus (Silurana) tropicalis RepID=RUSD4_XENTR  E=8e-37 s/c=0.62 id=33% cov=94%
--------------QVVREDPELVLVNKPHGLPVHGGPTVERSVaSLLPALAKHHFGWkaeplKLCHRLDRDTTGALILARTTEAAERVQQALREREVHRVYWALCLGTPSPREGILDIPIMEKETSgpqkhykmalSPRFRVSEEGavervrvprsAHEAVTRYRTLG-AASGASLVELHPITGVKHQLRVHLAlGLNCPILGDHKYSHWGRLAPQKPpdsvlralgltvpqartlsLHLHAVQLTLPSSDGSTPIVLQCPLPY
>UniRef50_Q74Z98(105-279:381) AGR305Wp n=2 Tax=Saccharomycetaceae RepID=Q74Z98_ASHGO   E=2e-36 s/c=0.88 id=29% cov=79%
-------------LKVVFEDNDLLVIDKPCGIPIHPTAYFYKNTLTEVLEDARGYPLFPCYRLDKITSGLLIFAKTQQTASRLQSQIRDQNMNKWYLARVDGNFDFNKKTASSPIYTFEPKKSLKGAFAPV-RDALTEFYHVAYNEElNQSLVLCKPLTGRTHQIRIHLARLGHPIVNDPFYNVKNSK--------------------------------
>UniRef50_C7H1V6(1-230:253) Pseudouridine synthase, RluD n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V6_9FIRM  E=2e-36 s/c=0.67 id=34% cov=90%
-------------MNILYEDTALVVLDKPAGLTS----EEGVPAALRQRWGRPDAYVGVIHRLDTGVSGLMVYARTPGAAAALTKQvtesqqayaILDGRVEagpgapaqpcflKTYRAVIAGGPDeqlPPEGILRDYLFKDSRKGRVFPVKRPrkGVREAVLEYRIVETAPDGsLSLAEITLHTGRTHQIRVQFASRKHPLYGDGKYGSRFKGD----IALQSAGLQFVHPETGEKMAFqlekpiKAPWD-
>UniRef50_Q2SJX2(85-287:297) Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJX2_HAHCH  E=3e-36 s/c=0.75 id=32% cov=90%
----NYDPQilalNSPQPTLVADHDAYSIWCKPAGLLTQGSEWGDHCSLLrMAELHFQSKRQvFLLHRLDREAMGLVIIAHNKAAAGRFGALLQDNALDKFYLARVKGRLAQEQGEIDFPV---------------DGKSALSYYQVQHYdDATDSSLVRVKLITGRKHQIRRHFADLGYPLLGDPRYGSG--NKHEDGLMLAATELAFTCPMRRRAMRVVMPE--
>UniRef50_C7LQ47(72-277:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQ47_DESBD  E=3e-36 s/c=0.74 id=32% cov=90%
----NYDPallalvPAQPEL--IAKAKHYSVWNKPAAVLSQGTRFADHCTLprLAQAKLGSRNELHPVHRLDREARGIMLLAHDGKAAAKLGELFRQGAVVKEYAAIVRGIPDWTDIEVNEPL---------------DGKEARSRFHVVQSDpASDMTLLLARIDTGRKHQIRRHLNGLGHPVMGDPRYGRGTRQVQE--LQLVARSLAFTCPFTNAPKQWAVPdLPF
>UniRef50_C0EY52(139-361:422) Pseudouridine synthase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY52_9FIRM  E=3e-35 s/c=0.67 id=28% cov=87%
---------------VLYSSEDILVFHKPAGMLSQRAKASD--DSLNDYLIDYCIQTGIIskeelagfrpsiaNRLDRNTSGIVLAGISIKGLQRLASMLRERTLGKYYLCLVEGKVKE-DARIAGYLTKEEKNNKVslHKEKAEGASYIETEYKVLK-STDKASLLKIRLITGKSHQIRGHLASVGHPVFGDYKYGNRDFNNQIKwkdgvnYQLLHSYELVVPE-GTGE----------
>UniRef50_Q3A211(76-273:296) 23S RNA-specific pseudouridylate synthase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A211_PELCD  E=3e-35 s/c=0.76 id=30% cov=87%
-----------PELTILLETDEFLAVFKPAGLAVH-SSVGHTEDNLTDRLKAWIKQCKapyriaPVHRLDIGTSGPVIFGKGRKATAELGRLLQNGHMSKTYLALVNGHPPETGMMVTS------------VRVQGKPKQAATRFRVLGRHASAALLELELLS-GRKHQIRQQCADAGWPLYGDHRYGGPEL-PGRDRLFLHCWQLAW--PIQGDQpsHRITSPLP-
>UniRef50_A1KTA8(96-303:307) Pseudouridine synthase n=24 Tax=Neisseria RepID=A1KTA8_NEIMF   E=3e-35 s/c=0.72 id=29% cov=91%
--------------KILHIDEHLIVVDKPHFLPVIPsGRFLRETLLTRLRLRPELQHlnvedITPLHRLDKDTAGVMLLSHNPATRGAYQTMFQNKTVWKTYEALALtRTDLPYPLDVVSRLVRGEKFFTTQEV--EGVPNAHTTVELIENRGE-FSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYpvlSEAGSEDYRKPLKLLAKKIAFADPLSGRERVFCS----
>UniRef50_Q6NEJ6(116-344:349) Pseudouridine synthase n=6 Tax=Corynebacterium RepID=Q6NEJ6_CORDI   E=3e-35 s/c=0.66 id=31% cov=95%
-------PAPEPTIPysctVVYEDDTLLVADKPPFLATMPrGKHITNSATVQLRRSTGIDELSPAHRLDRLTSGLLLFTKRKRVRGAYQTLFSERNVRKTYVAtaqynpsitpgtIWRSHMTKTAGEIQGHIIDAPPNAETLVSAIERiDAPTQQHLHALHGTDVDLAHYTLKPHTGKTHQLRLHMLAAGVPILGDTIYPtilAEDAEDYSRPMHLTSTELEFIDPLTGRPRLFT-----
>UniRef50_A1WL43(98-304:314) Pseudouridine synthase n=12 Tax=Proteobacteria RepID=A1WL43_VEREI   E=4e-35 s/c=0.72 id=33% cov=90%
--------PFAPTL--LHQDPHLVVADKPHFMPVTPsGRYLQHTLLVRLKRQLGLPQLSPVHRIDRDTAGLVLLSVQQCTRGAYQALFRERRITKHYEAI-----APWRADVVFP--RDHTSRIEPgpqffrMQEVPGPPNSHTHMQLLAVAGD-WAHYRLSPSTGKRHQLRVHMAALGLPLRNDPFYPvvdDPPPGDYSRPLQLLARALEFVDPLSGERRVFES----
>UniRef50_C4LE96(102-310:316) Pseudouridine synthase n=23 Tax=Gammaproteobacteria RepID=C4LE96_TOLAT  E=4e-35 s/c=0.71 id=30% cov=91%
--------------SILYMDEHLLIADKPHFLPVTPA-GDYVSQTLLARLVARLNNFElqPLHRIDRHTAGLVMFSVQKKSRAAYQALFRDRKIEKRYEAIAPALPQIAFPHIRATRI-ERGEPFFLSQETAGTANSQTIIDVIERRAD-LWKYALNPVTGKKHQLRLHMSALGAPIYNDAFYpsvNDDVADDYQKPLQLLASELTFVDPVSGVKRHFKS----
>UniRef50_A6BI61(41-294:296) Pseudouridine synthase n=4 Tax=Clostridiales RepID=A6BI61_9FIRM   E=5e-35 s/c=0.59 id=30% cov=93%
-------------LNILYEDPHILVCVKPHGIATQ-SKSIRYPD-MVSLIKNHLakasgtsgksgapksigsrtpgsaePYLAVIHRLDQPVAGILVFAKTPAAAKDLNKQLQNQGFGKYYRALVTNAPSEEEGTLEDYMVKDARTNtsRICSAKENGAKIARLHYDTVPDHGRlfstvsgssssvdvslssqsqecHETELEIHLDTGRHHQIRVQLASIGCPIVGDTKYNPElTGNKGWQTIRLCAYKLDFKHPVTHKAMHFQLEAD-
>UniRef50_B2S1F9(99-286:320) Pseudouridine synthase n=2 Tax=Borrelia RepID=B2S1F9_BORHD   E=6e-35 s/c=0.79 id=24% cov=84%
---------------IVYEDEDLLVINKRRGALVHGDKYSLgaliNSYLLDENLESLSFKPSSVHRLDRNTSGLIIFAKNIDSARILSRAFSSGIVTKKYLALLDGEIKKPL-TYRNFLYRDRIARKTFVVNDEGRCNAITDVKPILV-SKSSTLAEVSIRTGFTHQIRAQCAFNKHALINDKKYDSKFKKNNY---FLHSFLIKFN----------------
>UniRef50_D1AYL9(80-268:280) Pseudouridine synthase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYL9_STRM9  E=8e-35 s/c=0.79 id=25% cov=83%
--------------MIVFEDEDVFIINKPNNMPMHKGDKHKFGLSETAKAYYNNPNVNFANRLDLETEGLVIGCKNLQILRKVNEEIRNKKIIKRYIAkVEQKKLQLDEEFFSDKKIKIFEDRVR---VSKDGLEAKTYFKVIEV-KDFKVLLDIELITGRKHQIRVHLSDIGHPIIGDSKYGNYQKK---DRMYLKCYYIKF-----------------
>UniRef50_Q7VI73(66-289:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=9e-35 s/c=0.66 id=30% cov=92%
----------DIELEPLFFNEDFCVYDKPHNLLTHP-KGRFYHYSLNDALKLRFGNYaNAIHRLDKQTSGLVLCAINPQSEPELKELISTRQILKTYYAIVEGKLTQ-ECLIDEPIAlqkYKGTDLSIKSIISPYGKPSRTKlYPLAYHSPTDSTLIRVLPLTGRTHQIRLHCAHIGHRILGDPLYGTKEEysrfylespalpphqyesYFGAPYLCLNAHTLAFS--FKGKSYYFTS----
>UniRef50_C0W298(125-357:358) Pseudouridine synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W298_9ACTO  E=1e-34 s/c=0.64 id=24% cov=93%
---------EHIHIPIVHRGNGWLVINKPKDIASTPrGSYIVRTATIALRRQEGNADLTPAHRLDRATSGLLLFTERPELRGMYQDLFQNRQVTKTYRATAKAIdfnyikssalvkitvdPEEQPGWvkIESRIEKRPGDPGAQHAFGK--INAVTYLRPVKTvtiEGQQFVEYEVQPQTGKTHQIRLHFASLGAPLVGDPLYGGfnaapfglEKVPAGYQELHLEACRLEFKDPQTQEMVKIE-----
>UniRef50_D0LDE5(88-291:317) Pseudouridine synthase n=18 Tax=Actinomycetales RepID=D0LDE5_GORB4   E=2e-34 s/c=0.72 id=29% cov=89%
--------PIPFELPILYADENIVVVDKPHFLATMP-RGRHVTETALVRLRRQLGsdDVAPAHRLDRLTAGVLLFTLRREVRAAYQDLFATRAATKEYRALaPVDDALTTTVTIRNRIEKTAGDLRARVV--DGPVNAISDITLLSDAG----LYRLVPHTGRTHQLRLHMASLRVPIVDDPLYPDvrpelaqrPDVGDFSAPLRLVAHALEFTDPFTG-----------
>UniRef50_C3XID6(78-293:326) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XID6_9HELI  E=2e-34 s/c=0.68 id=23% cov=92%
-------------IEVIHENSDYLILNKPRNLVVHHAPSVKEVTLTDYLSAKNYElstingemRFGIVHRLDKDTSGAILVAKNNASHLRFAEMLQNRTMGRIYICVINKALQHNTF-VECYMGRNPNNRLKMAKLDKEkypfARDSKSEFRKIMESKNGvFELIGVRLFSGRTHQIRVHLSTLQRYIYGDMLYSPENLKSTYKtKMLLHAQLLYFD----GNVFSAKIPKD-
>UniRef50_C4Z9Y6(93-316:324) Pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9Y6_EUBR3  E=2e-34 s/c=0.66 id=28% cov=90%
-------------LGVVYEDDDILAANKPVNMLSQKSK--ETDISANERLIGYLikegkldfdtyksFKPSVCNRLDRNTSGLILMGKSLHGLQYLSQVLKARTAEKYYMALVAGEVDEPM-TIEGFLTKDEAVNKVQITrepISDESLPIKTAYRPLKTidmsaSCHKATLLEVHLITGRSHQIRAHLSSIGHPIIGDIKYGDRRINAFYKenyhvtSQLLHAHHVILPD---GRYIEAALP---
>UniRef50_A3QIB6(89-310:313) Pseudouridine synthase n=4 Tax=Shewanella RepID=A3QIB6_SHELP   E=2e-34 s/c=0.66 id=30% cov=91%
--------------SILYLDEQIVLANKPHFMALHPG-GEVINQCLINRLRERTGCETLIaaHRLDRATAGIVLLVKQSDSRDAYHGLFRHGQITKEYQALARLTPEllaeyhagklslPRRWTVKNRIDKGTPSFTMRIVDGEA--NSHSEIALVSVEGE-IGRFELMPITGKTHQLRLHMNSLGMPILNDNFYPtllPRSAEDVAQPMKLLARRLAFTDPVTGRKLDICLPE--
>UniRef50_Q57Z98(599-815:828) Putative uncharacterized protein n=3 Tax=Trypanosoma RepID=Q57Z98_9TRYP  E=3e-34 s/c=0.68 id=28% cov=90%
-----------PIFPVVYEDDDLLVINKPPHVATSRHALscsqlcdDKATDIVSLQLtckkrgdvMRRVFRQGQVHRLDTETSGCLIMAKSDVAASSLRHQMgtsaAYSQSSKIYLALCA--------VVESNLTNIPLNG---VLRDPADAKITTKYRIVHFYKRfRVALVEARIQQGKKHQIRRHLAAVGLPILQDVEHGGAACCsPLLQRVALHASSVTVVHPRTAEVLTCVAPLP-
>UniRef50_Q7V4B8(97-329:338) Pseudouridine synthase n=2 Tax=Prochlorococcus marinus RepID=Q7V4B8_PROMM  E=4e-34 s/c=0.63 id=28% cov=91%
--------------EVIFDDGDLLVVNKPSGLPVIPGGGflDHTLTGLLQRrcqLDGESRLPRPVHRLGRFTSGLLICARQRETRAKLSAMFRRATAgdqgcKKIYRALAHRNLNVHCdevATIRVPIVQTaHPMVGKVWVAADSSRqhdskqsesrvlTALSTVRLLERRQD-ADLLEVAIQTGRPHQIRIHLAAIGSPLIGDPLYGfdgqiSSAATPGDGGYCLHAHRL-LDVPYRNRLHGFTA----
>UniRef50_A4QI08(90-315:322) Pseudouridine synthase n=5 Tax=Corynebacterium RepID=A4QI08_CORGB   E=5e-34 s/c=0.65 id=29% cov=95%
--------PIPYKIHVIHEDDDILVIDKPPYLATMPrGRHITETALVKMRVLTGNNDLTPAHRLDRLTSGVLVMVKKPELRGAYQTLFARREASKTYEAIAEFVPglldngpaiwesriEKERGIVQAFVVEGPVNARTELVSVTPVDDAEQSIlEEMHGPLPRQARYVLAPSTGKTHQLRIHMRDFAAPILGDPLYPvlhAVDDEDYTTPMHLIARTLTFVDPQTNEERTFVS----
>UniRef50_D2NPM0(127-369:377) Pseudouridylate synthase n=2 Tax=Rothia mucilaginosa RepID=D2NPM0_9MICC  E=6e-34 s/c=0.60 id=29% cov=96%
------DEPELPsDMPVLYEDEHVLAIDKPHFLPTTPrGAYIAQTALTKLRVREQNPLLIPIHRLDRPTAGVLLFAKTVEARRPFQMMFQHRRVSKTYRAVAPVPADPAAAEralsaeglqVRSHIQKIRDQLQVQQLSEEQcaaqgvEPNTLTTAKILQTFTPSAqavegwraepnrewALYDLAPHTGKTHQLRAHLNMLGSPILGDVLYPqvlPDAPDRPEYPLQLLAYSLHFEHPITGERVDLYS----
>UniRef50_B8CVD5(16-194:237) Pseudouridine synthase n=15 Tax=Shewanella RepID=B8CVD5_SHEPW   E=7e-34 s/c=0.82 id=30% cov=82%
--------------QIIADEADFIVICKSANIHFH--SQDGSAGVVAQAELDLGIKLYSVHRLDTMTSGLLILAKSSAVAAEFTRQFSEHKVQKYYLALAKGKPKKKQGWVIGDMAKSR--RSMHKLLRSMDNPAKTQF-FSHSVGDGLRLYLLKPLSGKTHQLRVALASIGVPILGDELYGG----DASDRGYLHAYSLNF-----------------
>UniRef50_C7H0C0(80-273:322) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0C0_9FIRM  E=9e-34 s/c=0.75 id=33% cov=78%
----------KPSFKIIFEDDNLLVVYKRAGLLTHGSSTEKKRTLLNEvktyLIQKGEYDPGFektfslatSNRLDRNTEGLIAIAKNAASQRELNAAFKEGRIERYYVAEVVGEVR-GDVTIDYPLYKSAKNNTVFAdkdgsVPPDVTKEAITKVHPIRVNRIDkngseftYTVVRVKLLTGRTHQIRVHLAAIGHPLVNDRKY--------------------------------------
>UniRef50_Q2JFI3(2-274:304) Pseudouridine synthase n=2 Tax=Frankia RepID=Q2JFI3_FRASC   E=1e-33 s/c=0.53 id=33% cov=89%
----------------IYEDEAILVLDKPVGISVM---GERHDTDLVTLAGDDGEELFPVHRIDKVTSGLVLFARQLRFHGDLTRQFQRRTVDKRYLVLTRTRGLPASGTVDLPLSVGRKSRVRVAANRADIMadlaevaplaevadlgevaplaevaplaevadlgeaaplaeaaraevgptgagagagvgrwtvppaavfphvrtyPSVTTFIRVWEGGE-YTLLAVTPVSGRRHQIRVHLAWIGHPIEGDPLFG----RDATARTLLHSWRLAFDAAwAGGSRIEVEAPPgaDF
>UniRef50_B5Y415(5-189:193) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y415_PHATR  E=1e-33 s/c=0.78 id=38% cov=73%
--------------------------------------------------------LFIVHRLDCETSGVLLFARTSEAASRLSRAWREReHVQKTYVAKVYSWrLPETSGRIDLALAPHPTERIKW-IASKEGKPSTTLWTVMPDERKATCQnpdsdgcarpvkLRLIPVTGRTHQLRIHCCAHGDGILGDTLYGKFATQSLPgkrSRLFLHSQALSVPHPTTGKMVTFIS----
>UniRef50_B8DML1(157-381:393) Pseudouridine synthase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DML1_DESVM  E=1e-33 s/c=0.64 id=34% cov=87%
--------------------EGLLVLLKPAGLAVQPGTG--HDDCVTARLAAQYAGadflPTPAHRLDRDTSGLLLVATSYARLRALSDAFAAREgLVKEYLAWVAGRWPHEGARTLHDRLEKQGAPGRQKVRRVGGEGSVPRaasgneaVRVESgtdaahaaagadagrhaactvtplRRGDGASLLLVRLHTGRTHQIRVQLAERGHPIMGDRKYGGPAC---GQGMLLHAVRLTLPD---GER--FTALPDW
>UniRef50_Q07X80(108-321:326) Pseudouridine synthase n=17 Tax=Alteromonadales RepID=Q07X80_SHEFN   E=1e-33 s/c=0.68 id=31% cov=91%
--------------QVLYQDNDTIIVYKPHFLPVTPGGNYVNECLVHrLRIATQIDTVAPAHRLDKDTAGVMLMTLNPQTRHAYHQLFLDDKITKDYQAIAKLTPTllsefadntcmlPIHWTVKNRIVAANPSFTMQVV--EGEANSHSEISLVAV-KNGFGLFELSPITGKTHQLRVHMQSLGMPILHDRFYPvllPKGPDNFDKPLQLLAKRLRFTDPISAIEQDFQC----
>UniRef50_UPI000180B18D(177-356:456) PREDICTED: similar to RNA pseudouridylate synthase domain containing 2 n=1 Tax=Ciona intestinalis RepID=UPI000180B18D  E=2e-33 s/c=0.80 id=31% cov=80%
-------PVLDTKVEII-EDNSkYVVVNKPSSIPIHPC-GRFRNNSLVYILAKDLGYQGLlgCHRIDRLTSGIVIFGKTKNIAHKVAKEISERKVEKQYVCKVVGEFPSTDIVCNEPVSlfnRKLGYAVAWKVEGVVGKEASTWFTRMSYDGTN-SVVLCKPKTGRTHQIRVHLQYLGFPIINDPIYNHP-----------------------------------
>UniRef50_C3XDX0(91-260:279) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDX0_9HELI  E=3e-33 s/c=0.85 id=29% cov=78%
---------------VIFEDDDILALDKSVGIES-------------YSLLKTYPHYKLINRLDKDTSGVILLAKNEKMRQKAIQAFKQKEVEKMYFALIEGKVYE-EINIEKKISTQKDSKAKSYVDNE-GLYAQSIVTPLQTFT-HTTLVSVQIPTGRTHQIRIHLKSIKHPIIGDIIY-NKTSLIKAKRLMLHCQKTSL-----------------
>UniRef50_C7R188(122-344:362) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C7R188_JONDD   E=3e-33 s/c=0.64 id=28% cov=93%
------DPEPEVPFacDVLFEDDDLYVIDKPHFLASTP-KGRYVTETALVRLRKDtgNPELSPAHRLDRLTAGVLVFTKRRELRGAYQELFAQRQVTKVYQAVAPTNPA-----VDLPATVRSRIVKEHGIMRAHTMPGEPNTETLVTLTDTATlpaghdvavqdvgLYTLYPHTGKTHQLRIHMASLGLGIVYDNYYPDFyhvESDDYRHPLQLLSSQLAFTDPLSGVQRDFRS----
>UniRef50_UPI0001BC5679(71-271:291) tRNA pseudouridine synthase A n=3 Tax=Fusobacterium RepID=UPI0001BC5679  E=1e-32 s/c=0.70 id=26% cov=91%
MTFIHLSQEEKKRLEdgIFYQDTDILVFYKKAGELMHKGSSHDYGLAEQFQAYFQNEDFHFVNRLDKETSGLVLGGKCLKIVRELAEAIKKRTIIKKYYIIIEGSPEKNHFSLKTYLKKGENKVLESQTAKEEYKECSASFSVIRKNKE-YSLLEAVLETGRTHQLRVQLAGIGFPILGDIKYGKKR----AKRMYLHSHLLKISD---------------
>UniRef50_A4SY63(88-299:299) Pseudouridine synthase n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SY63_POLSQ  E=2e-32 s/c=0.67 id=31% cov=89%
----------------LYQDEHILVADKPHFLPVTPSGLYLHQ-TLLNRLKKktGIQTLSPIHRIDRDTAGLVIFSINPYERANYQNLFRDRTVTKVYEAI---APYSKELANKLPLTYRSRleesEHFLQMQEVEGEANADTYIELLE-ASEPWARYCLGPGSGKKHQLRCHLNALGAPIKHDQIYPvltpyQEYDLDFSKPLQLLAKEIAFKDPISGEFRSFIS----
>UniRef50_A9GNR7(134-341:368) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNR7_SORC5  E=2e-32 s/c=0.68 id=28% cov=88%
-------PDPSAPLDVVLERDDLVVVNKPAGVPTaplHPGERGTVANALVARypemagIGFSPREPGLCHRLDTDTSGLVLAARTAAAFAALGAGLKEGRLDKRYLLICQIGDLPEMGSIEVPLAPHPKDKKRVYpcihprdVARYAPRPAATMYKRVRQVGLWE-LVEARAPRALRHQIRAHFASVGHPLAGDVLYGGPAVEGLS-RHALHAHYIG------------------
>UniRef50_C1ZMD6(200-385:400) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMD6_PLALI  E=3e-32 s/c=0.75 id=31% cov=72%
-------------------------------------------------------HVRAAHRLDRQTSGLVVLSRVPEAGAKLYAQFQAHDVLREYEALVWGWIEPQ--RLESELIRDRGDGRRGSRqpvtmleagaedspaanPLPAGKMAATnlvasrqgHFKSGTGELAPVSWIRCQLETGRTHQVRIHLSEKGNPIVGDDVYGT-HSLDGVPRLYLHAARLGFIHPMTGKRLEFS-----
>UniRef50_Q7Z110(95-305:350) Chromosome undetermined scaffold_37, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=Q7Z110_PARTE  E=3e-32 s/c=0.66 id=30% cov=88%
---------EELKKMILYENDQIIILNKKHGYASQGGANPNY--NIPEILNLYFKNFYIIHRLDQLTSGLLIIAKNKDIATEISTIIQEKAfITKKYIAVVQGQIKVQKGLIDRPLLFNTNNQKQTCYNEEqllEGKylPARTSYEVIeeyQYQDEMYSILDLQIFEGRKHQIRAHLSQvLNTPILFDQKYGFQFTKTNRDlqtsifgedqGIMLQAKRIVF-----------------
>UniRef50_Q6MKN0(84-282:283) Putative RNA pseudouridylate synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKN0_BDEBA  E=4e-32 s/c=0.70 id=31% cov=90%
---------------IVFENEHFVVTNKISGLPVHASVDNLHENLQSYLQQTLHQNVYVTHRLDVPTRGLIVYAKSPEFQTEFNKLLIAREMNKIYRARVQGHSL-STGLLQHYMEPS-PRAPKVVSKELQPKWQECLLEILEFSKleNEMSEVRIKLHTGRTHQIRAQLSAEGHPIVGDVAYGAVKVWDE-ERIELEACELAFTNPLTGEHHEFK-----
>UniRef50_C7MAG2(71-292:305) 23S RNA-specific pseudouridylate synthase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MAG2_BRAFD  E=4e-32 s/c=0.63 id=28% cov=92%
-------------LRILHRDAHLLVLDKPHDMATMP-RGAHVLSSALVRLRRATGISTLVplHRLDRRTAGVLAFGIRPEERSAYQQLFARQEVDKEYEALLVLGPgtSLPTAVGERAVLRDRLDKRRgelTTRVLDGPPNAETALEV-RAAGEGLLQVRLHPRTGRTHQLRAQLAARGAPILGEDLYRPAQDPPPPAdaggpdlPLQLLSRTLRFADPHTGVRREFTS----
>UniRef50_A9SET3(55-309:327) Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SET3_PHYPA  E=5e-32 s/c=0.55 id=28% cov=92%
--------------SVLFEDEWLIIVNKPRGLYS--GHVFETMPSLCSSSGETPLHLHMANRLDRDTSGIMIITKCKVAAANLTRSYMNRKVHKTYIAQCAQsQPTWRKSRIESGHGRSRYGawhvyakhdiGRRLPVKTETVREMITRLEIvsgpdslrwdnelsvehdclevivgsedevrlvsnevtkrCSDVDEEVTLVRAFPETGRTHQIRLHCQYLGLPLCGDVKYGGPlfWQSVHYDSHTLHAESLALRHPMTNQLLQVVAP---
>UniRef50_B0E5G5(133-324:402) Ribosomal pseudouridine synthase, putative n=2 Tax=Entamoeba RepID=B0E5G5_ENTDI  E=5e-32 s/c=0.72 id=32% cov=75%
-------------LTIVKETNDFIAIDKPSSVPVHPCGRYRHNTVIFILSHEGYPNLRPVHRLDRMTSGILLLAKTIQAAREFQNHMVIK--KKEYICRVRGKLEKT--VVTSKIGRKRIDDKKIHVsvnkIEEDGKECCSEFNPLFYDEKtNTTVAVALLGSGRTHQLRVHLQSIHHPIVNDPIY--------------------------------------
>UniRef50_Q9LU60(124-311:395) RNA pseudourine synthase 7 n=12 Tax=Embryophyta RepID=PUS7_ARATH   E=6e-32 s/c=0.74 id=30% cov=76%
---------------ILHQEPDVVTVCKPASVPVHPcGQYRKNTIVGILDAEHDLGTLFPIHRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMIVDANINYNGSEGRSTAEDANssgddkkvKGKPACTKFTRIDTNGTH-SLVSCEPVTGRTHQIRVHLQYTGHPIANDPLY--------------------------------------
>UniRef50_B3RX30(7-219:247) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RX30_TRIAD  E=3e-31 s/c=0.64 id=32% cov=86%
--------------QIVHQTNSYVIINKPFDMH-INSNEEDVKPTVATQLAELLPtlvdksicfGFRFVNRLDYATSGLLCIAFDKRAANMARKLFEANHVSKKYLALVRGILSRDNGDIlvRKAIGLDRRDPRGFRMCIPDhnphlcqsPKAAETLIRILgygKYDGEDITKISLSPVTGRRHQLRVHCLTLGHCIVGDYTYSN-EVDSKPYRMMLHSYSLKIP----------------
>UniRef50_B7FVV1(198-424:424) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FVV1_PHATR  E=3e-31 s/c=0.60 id=36% cov=87%
--VLNYKKP-PFELPVIIEDDHWALVNKPAGIVVYNQRNGGHGImTVRAALpfvlappkvgtISVLRRPASVHRLDKPTSGILCIAKTKPAMLCLSRQFHDRIVKKTYFAVINGIPTysneskiSSKTAYELGVDVDPNDLDDWQLIDSplDEKKAVTVWRVVRsikslHANDGYlTLVELKPKTGRYHQLRRHMAWVCqRPLVGDDEYDGGTESAMRFR---------------------------
>UniRef50_UPI00005230E6(163-373:494) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Ciona intestinalis RepID=UPI00005230E6  E=3e-31 s/c=0.65 id=32% cov=81%
---------------VIYADNKLVIFNKPYGLPMHDGDGTKQTVkNVLPFLSKMVYGIntdiplHLCHRLDKNTTGITICSTDAEMADYVMGLFRQRRVLRKYLAVVVGEPEPMKGVVDMPMsesivsatkstKRHSRMIIKPDVRYDDatgkeyplrnagGHTAITHYRTIDTTGD-LSLVELQPQTTVKHQLRVHMAdGLSCPILGDHKysrYGSLAPQVLPPR---------------------------
>UniRef50_A4S4A1(72-281:357) Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4S4A1_OSTLU  E=5e-31 s/c=0.65 id=30% cov=83%
---------------VLTVNDDVVSVWKPATVPVHPT-GQYRRNTVLALLaasRRDLGRLFPIHRLDKNVSGLLLLARSSEAANEMRVKMEAREMRKEYVARVRGAFNDGDATPVSNVeslgfdskGRVAIWRGKKGVTDLDErtlksfKDASTKFTCIKTLVDGTSLVRCEPFTGRSHQIRAHLAMLGYPIANDVAYGGALVEVERARAIQHA----------------------
>UniRef50_Q8SVK5(78-244:318) Putative uncharacterized protein ECU05_0680 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SVK5_ENCCU  E=3e-30 s/c=0.80 id=31% cov=77%
--------PAHPEIGVIKEEGDYIVVNKPPGIPCHPTGG--YREYCVTKALFGDEKVACINRLDMPVSGVLILAVRN--HSKCLEAI--RDAKKIYVAKVYGMF-PDKVDVDKRIGCTE---GRYRHVNAGGKACLTLFRRLEY-RDGYSLVECRPVTGRTHQIRIHLQSIGFPIANDIMYGDGEA---------------------------------
>UniRef50_C4GD18(5-290:312) Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD18_9FIRM  E=3e-29 s/c=0.45 id=27% cov=89%
--------------EIIYEDADIFVCYKPAGFATQTASALQ--ADLVSELKNYRKsrgesdYIGLIGRLDQPVEGLMVIAKNPRAAGKLEAAQAKGRIDKYYLALTQGLPkgpdcgqeadslhrkgewiflendmlpasrgkngrllaPEDKGTKNghqpAPEDKGTKNGHQPAVKDKGAKktrlpapgtgeaktacqlapgtgeakkacllapgikgarKARLEYQILDHSKTKdgraLALLRVHLLTGRRHQIRLQLSGLGSPILGDARYG---ADPNGQPLALCACQLSFPHPGTGERISYE-----
>UniRef50_P45614(75-277:302) Uncharacterized RNA pseudouridine synthase MCAP_0714 n=3 Tax=Mycoplasma mycoides group RepID=Y714_MYCCT  E=7e-29 s/c=0.64 id=27% cov=84%
-------------LDIVYEDNNILIVNKPNNLEMHSIYNLCLDDMVKSYLvdkkeydiyLENSFVISHVHRLDKLTSGLVIYAKNKISSIILTNAFKTKdQINKYYYALTSYDWNLNDFLqVNGYINYNSNTQKADFslVEKNNYKYCQTEFKLVNKN-----LILVKLITGKKHQIRSVLSFYNNPILNDFRYNGKKENDQ-KMIYLAAFKIEF-----------------
>UniRef50_Q69K07(179-345:448) RNA pseudourine synthase 4, mitochondrial n=5 Tax=Poaceae RepID=PUS4_ORYSJ  E=3e-27 s/c=0.74 id=32% cov=68%
----------------IYKDEAIIVVNKPPGMPVQGGVGIKNSIDVLASMFEENssEAPRLVHRLDRDCSGILVLGRNQLSTSMLHAIFREKTadaladgtqhvLQRKYVALVIGTPRHPKGLLSAPLAKILLQDGKSERLTIRAssnaasvQDALTEYRVIESCPQGYTWLELFPRTGRKHQ--------------------------------------------------------
>UniRef50_Q6F0Q2(102-303:323) 23S rRNA pseudouridine synthase n=1 Tax=Mesoplasma florum RepID=Q6F0Q2_MESFL  E=1e-26 s/c=0.60 id=24% cov=85%
-------------IDVIYEDSNLLIVKKPYNVEVH-SPVKTSMDDIVKNYLFDTNQYNPseensyvishIHRLDKLTSGLIMYAKNKQTHDIMVEAIQDKEkIEKYYRCRIDVPVTESliaKGWIKyDPIIQKSVFSEEFR---SDYKEATTIFNVVSLDVTNEqTELEVQILTGRKHQIRATLEYYGASIINDSRYSGTIINNE-KMIFLFANKLVFN----------------
>UniRef50_A7AQ79(151-353:465) RNA pseudouridylate synthase family protein n=1 Tax=Babesia bovis RepID=A7AQ79_BABBO  E=1e-26 s/c=0.60 id=31% cov=80%
----------DSSVRILHEDDDYIAVSKPSSLPLYHTGTYYYNTLVEVLKNEVFKDSartlYPVHRLDKLTSGVIILAKSSKAASEFCEGIRNSRFRKVYIARVKGDFTNVFGDHECISINDGIGVGNGSVACCHGfmrcvshklsmheftlddtkkdvKVAETRFRMLSYNSSlDESLLLCYPVTGRTHQIRAHLKYLGYPISNDKCYNDGE----------------------------------
>UniRef50_C5KHN4(113-290:296) Ribosomal pseudouridine synthase, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KHN4_9ALVE  E=1e-26 s/c=0.68 id=30% cov=78%
---------------IVFirEDSArgIVAVHKPAGLPTHSG-GKYMRTSLVHILARafNLSTIRPINRLDRETSGVVLLAADASVHERL----KDRSL-----------LSKVPALCRTPIAvdRHVPNQPLMSRVVEDSTNS-TLCTTLFRNLGN-GVVACRPVTGKTHQIRVHLSHLGFPIQGDTLYGGRSTPEG--RLRLHAHCYQVKDP--------------
>UniRef50_D2L201(86-269:313) Pseudouridine synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L201_9DELT  E=2e-26 s/c=0.66 id=29% cov=82%
--------------PVLVQTGDFAAVSKPAGLHSaaiaHGG--GQSLDDLLPALFPDRAAI-LLSRLDRLTSGIVAVALTPGAGTRYRDLEDAGQVAKDYLAVVHGVIADP-FVVDFRLDTADRAKTRVRFKSEPDPLRHTQVEPLDRL-DGLTLVRCRIAKGARHQIRAHLAGAGHPLVGDPVYGRGEGE----RLHLHCAALA------------------
>UniRef50_C9N1D6(103-316:328) Pseudouridine synthase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N1D6_9FUSO  E=2e-26 s/c=0.57 id=20% cov=85%
--------------MVIFENDDFFIVNKKEKVPMHKGTGHKYGLAEVFKKIYKSDNINFANRLDFETSGLVIGCKTLKFLRYISQKIRDNEVHKKYFAVVHnkniirrnklerEKFNLEDFKIENYLTTLENKVIvSENPVSRESKKSITYFkhvnfnklkkskeilKLFEKNNKNILLLDVELITGRKHQIRAQLAHESLFIVGDKKYG---IKDGSDRFFLCCYSISFD----------------
>UniRef50_C1MPG5(72-335:348) RNA pseudouridylate synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPG5_9CHLO  E=5e-26 s/c=0.45 id=31% cov=86%
----------------------FVVVRKPAGVYV---------DDVLAALERDASasasaspspsprRLHLAHRLDRDTSGCLVVATSTRACAALTRAFADGKVRKEYLAhcssaaasssseprepdpspspsldgarpltLRTGHGRSRNGLWRVYplsdvgraLPRDPGRKTTLVKIAETSlvvvATAAARGGGGGGERSRCAYVRATPTTGRTHQIRLHCAHAGAAIVGDVKYGGPRVveeeeeeeekeketqeddaliDTRFDGFRLHAAKIAFPHPTReGQTVEVECPPP-
>UniRef50_B7XJU4(71-322:331) Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJU4_ENTBH  E=1e-25 s/c=0.47 id=33% cov=89%
------HEPKQPHIPTIYIDDEITVVNKPFGIPCHPVGAYHYYT--VTKTIFKNKPVGCVNRLDIPVSGVLIIntCNQKRIHEYLLNS------KKIYIAKVIGQFifsdeqlhklgiekrisnGKSIIIVNKSLLLDPKT--KKQKISDDGKFAETHFELVSY-QNQYSMIKCYPITGRTHQIRVHLAYIGFPILYDTLYGSypaykfnslyncntdisqfenqklykfviKYCPGPQNRtcsiqnqyICLHAWKYIFN----GKA--FTAPLP-
>UniRef50_B8BXJ8(103-270:383) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8BXJ8_THAPS  E=2e-25 s/c=0.70 id=34% cov=72%
---------------ILY------CINKPASVPVYPsGPYYSNSLLMMVEAQEGLPPKSLVpcHRIDRATSGVLLCTIDSKVSRAVQGRMASRNevgtqhpIKKLYLARVQGKFPDPSSSV--PVGA---ASMMHRSVSRDGKQAISRFRLLSYdAATDQSLVSCCPITGRGHQLRVHLQFIGLPIHNDVEYGG------------------------------------
>UniRef50_C1FHP0(248-561:730) rRNA/tRNA pseudouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1FHP0_9CHLO  E=1e-24 s/c=0.37 id=34% cov=80%
--------PDPSPLHVVYEDEWLMAVSKPAGVMTYPahrlrgesvvSRAVHHLSVSAARRRGRLPYSSedlpeesgvgtpvgtpggsfagawtssqvepiAVHRLDLETSGVLLLAKDKRVASELQAKFEARGVRKTYLAVCAvledaeahkatatrrvdfeadvdtdvdsdadmdadvyadtdgdelGVFDESDLdddddddayedpddeldeldepgvvrVVNAAIGDPEPGTRRsaaaddggrcVRAVTPDGKPARTEYQclssrlgvptqvtmpdgVTRRTVVGTALVLARPLTGRTHQVRLHLAHAGFPIVGDGLYG-------------------------------------
>UniRef50_B8LDV9(281-501:590) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDV9_THAPS  E=3e-24 s/c=0.52 id=32% cov=75%
-------------IHILYQDDDLLIVSKPPGMVCYHNKKTSAGKITTSRKKKSRAANngkddgsndggdgklmdisledalidmafplstvnpsarGIVHRLDRGTSGAIVLAKNDETHLRLVASFFLRKATKVYSALVPGSCLQNidgdedanvsamltigsEGEIDLPVDRRPAKSKYRVVKMYGHQEEQT-----QQPTPEAILLEVQTLTGRKHQVRVHCASgLGRPIFLDPLY--------------------------------------
>UniRef50_C1M2U8(543-761:875) Ribosomal pseudouridine synthase, putative n=2 Tax=Schistosoma mansoni RepID=C1M2U8_SCHMA  E=3e-24 s/c=0.52 id=32% cov=76%
--------------------ENVIALNKPRGIASQPGADCKHNiVDLLPRIeslirkrnhhgkgeEKYIGELSTVHRLDKDSSGIILIARNKDSALKLQEAFSRRWIKKDYLCITVGIPRSDYGYIQLPLVERNFNGIRKMctpqlnrrlqeltckqtqldIDNEANEYDVTDAFTVLYDKmrtnnnqpttwynlidkqNNAALMLCSTLTGIKHQIRAHLAfGLHTPILGDHKYSHAE----------------------------------
>UniRef50_B7FYH0(78-308:311) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYH0_PHATR  E=4e-22 s/c=0.46 id=29% cov=87%
----NHVEPTFIHgnVTILARTDRYVVVAKPPTVVCHhsewtGSRSDPFQIPMLQRTREamGGNCVNLVHRLNWGCSGCLLLTYAADTAdaeiyipnttATLIASMKETASLKTYLALVRG-----EGLLQ---GRDFKQEGWFKVDRpiknEKGilNNATTWFRFVagqdndsgRINQPRASLVLARPETGRWHQIRRHLNGLSHPILGDTSHGNSHVNRewrdlrgmPAQRTCLHLARLQL-----------------
>UniRef50_D0CH73(6-117:120) Pseudouridine synthase n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CH73_9SYNE  E=4e-22 s/c=0.96 id=46% cov=40%
------------------RDPWLMAVDKPAGLLSQPGLGQEQGDSVITRLQQQDPSLRLVHRLDRDTSGVLLLARSADALRRLSALFTERRINKLYQADVEGEL-------------------------------------------------------------------------------------------------------------------
>UniRef50_B8P3B5(60-229:348) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P3B5_POSPM  E=5e-22 s/c=0.62 id=34% cov=70%
----------------LYVDRGLLLVNKPSGLVCQynrkddreqnaHSDFNDFTDDLKRQLSLD-ADLLPLHRLDKATTGALAFALTHSHAQDLAEQFNAHTVKKSYLAIVRGgtaSFPNRTGNIRGVLY-TTNGRVSSEAQGQWEKRAITEtdWEVLASSPvAPLSLVRLSPFTGHKHQLRVHMAKI------------------------------------------------
>UniRef50_C5K8M1(333-520:602) Ribosomal large subunit pseudouridine synthase D, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K8M1_9ALVE  E=6e-22 s/c=0.56 id=37% cov=61%
--------------------------------------------------------------LDFATSGALVLTLNKTADRETSALFQFRLTKKVYIAVCEGWVGDDELM--------KPRIITTGISSEGGGKMSSTIAVpvstghLLCDDIKCTVYILRLLTGRRHQLRLHLSYIGHPILGDYTYSthlpKGGRGPTLPRMLLHAWRLTLP----------------
>UniRef50_C8PKX0(65-456:470) Pseudouridine synthase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKX0_9PROT  E=7e-22 s/c=0.27 id=33% cov=95%
---------EPRGLKPIFECDAFAAFDKPSGILSHPS-GRNSPYNMYDEIWSLYGQDACVaHRLDLETSGILIVAKDKDAARELKECFEQRRVMKSYLALVQGDLREglrgdlqsaacngeiescyalgfdeicgskfagdavslpssvsdlrdtlalkgtgnkfgfnilsngasrglwcdalsydaqvkfnsgaptgdvdsrsefddlscgvsdklkpaitmssadnghkpcalsaakslpatskgcvnlkkfepakyakfseklkflkdfEGFVIDAPIAPSGEfaDLKIRMKISRDSKEAITLIRPLRYFSDiDASLIECYPLTGRQHQIRLHLFAAGAPILGEPLYGLSREQAerildkkmdetervrttGAPRLLLHANAICFE--LGGERYEIKSKFD-
>UniRef50_UPI0000E499FC(85-287:373) PREDICTED: similar to RNA pseudouridylate synthase domain containing 3 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499FC  E=2e-21 s/c=0.51 id=32% cov=76%
---------------IVYQQDGIVAINKPPGLGV-SGKVNEddessplTLSSMMSQVADftDCPSAEIAQGLEKEASGLLLLAENRMAAKKLQSKIKEarnrRQFIKTYRSIVCGIPETKIGVSKMYLGSDVIGGINMTVGRHNPsgrqirdgdvWSAETKYRVISENKElGCAFIELQPLRVKRHQLQVQMVNDLCPILGDHTY--------------------------------------
>UniRef50_C1EC23(120-306:498) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EC23_9CHLO   E=3e-21 s/c=0.56 id=28% cov=75%
---------------VLLEDSKLVFVDKPAGVPTLAGcgpklQGENNATRLLNRTRaenatgADDGELFAVNRIDKPVSGVWILAKgSRLAARCRAALAKPGHETKTYLARVRGAV-VGPIRIDAPLSVGADGR-ATTSGGADAKPAVTLVHPVARYPppwDDCTLVACRLErSGRFHQIRCHLASVGVPIANDATY--------------------------------------
>UniRef50_C7LVN5(79-250:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVN5_DESBD  E=3e-21 s/c=0.60 id=26% cov=78%
------------------RNESFAALAKPDGLHTVAGQEAACLESCLPGL--GLEGWELLNRLDCLTSGLVLAAAEKRDAAAYKVWQDAGQVSKWYLALARGEVAtlECRGRI-----LDDKRSVVRVTADEDEPLRWTRVRALRQI-DGNTLLLVKIFKGRRHQIRAHLAHAGHPLIGDPVYGVCEPGG----LYLHHWRL-------------------
>UniRef50_Q05FL2(8-188:204) Pseudouridine synthase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FL2_CARRP  E=1e-20 s/c=0.56 id=23% cov=82%
-----------------YFDNNIIVINKPIGIEV-----KNLLNVNFIKLNDKIPNFGILNRLDKYTSGLILVAKNFYFYFYFKKLIVKNLIKKNYISFVNKKIKK--GFVNVDIFKKKKSSIIKNNKKS-----ITYYKIIK-EKKNFSFLNICIKTGRTHQIRLHMMHIEKKIFNDFYYNKTYLLNNT----LHFKKMMFYYPFIKKKINL------
>UniRef50_C3JBT0(84-292:330) Ribosomal large subunit pseudouridine synthase family protein n=2 Tax=Bacteria RepID=C3JBT0_9PORP  E=1e-20 s/c=0.48 id=22% cov=90%
--------------KVLWQDDWFILVQKEPGIPTIaskPGDRHTVYRIVADHYKSGdaREKIFLLNRLDRDTRGLILFARDREVQQEILDNWEKYILSQTFSALVEGVVPEEKGEFApppKPKKTVGDKDTKKKVVVS--RRSRATYLVEER-GQWRTLLRISLL-GRYNGIRSQLNEKKYPLVGE----SKGVIKGAPSIALSQQELVLLHPITKEKLRFESPIP-
>UniRef50_D2VJR9(54-262:301) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VJR9_NAEGR   E=3e-20 s/c=0.48 id=32% cov=68%
------------------------------------------------------------HRLDMATSGVLCLSMTRESCACLSTSFEDKTSRKFYLALLSGDVNLEElkmneklrnnvkvvnendcskIIITSFIGRDDGGNNENEEYDPTGRgfvmkqtlekpiEDLSKYKTKQERQQHqfregtsemiilsygqvenkpVTKVLLRPLSGRKHQLRLHSLLLGHAIIGDEMYG---ENDGFSRLMLHAYSLQI--PIDKEYLS-------
>UniRef50_C1E520(58-333:372) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E520_9CHLO   E=5e-20 s/c=0.36 id=30% cov=86%
---------------VLYVDprARFFVVNKPAGMYVenvldfierymeevrraperHSERSKRAKTCsdgatsireAFDSLAKVGERFQLLHRLDRDTTGCLGIACDKETNRILSRAFQEGRVKKHYVAHCINtkfaddfQKKWKDWEVDEPFedgsramtwpqrfcnfrlechtghGRSKHGLWRLYAKEDVGrelpggskvKEARTNlYRGFDSDSDSKRLahlrelqsfpVVAEPITGRTHQIRMHCSQY-FPIVGDYKYGYDDtadddvvQEEREKGYRLHSFSLELP----------------
>UniRef50_B8BW13(24-273:614) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BW13_THAPS  E=6e-17 s/c=0.36 id=28% cov=66%
-------------------------------------------------------KVNLVHRLDRGASGCLLLAYADDdgaevanasvsgSTAMLIDALASPESTKTYVALVRG---EGILREEDFKTKGWFNVTRPIKDESGeEKDATTWFNFVAGQPEtvedgierpRMSLVLARPMQGRWHQIRKHLNGISHPILGDTTHGastvnrewKEKRNLPGERICLHLARLQL-----------------
>UniRef50_B5JQR9(19-252:270) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQR9_9BACT  E=1e-18 s/c=0.41 id=22% cov=94%
--------PEKFPL--IANDEGLFAINKPAGLASFQHEWSLGKPDISMALRRELLNEKPqlkklgieglyrAYNLDSELSGALVFAKNEEFEKILKNAVGSSQLVFRFHLLVKAETEDREFVCDLPLM-NHHQAKRMIVSHRSGKKCETRFRFLRGFGQ-YQLWEAETTSLRVHQVRVHAAERGLNIVGEDFYsdgeeiylsrikrdymsGRGREKPLYGSLCVHLVEVEFRIPDLKLE-SILAPLP-
>UniRef50_C1DZS3(156-445:474) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DZS3_9CHLO   E=2e-18 s/c=0.33 id=29% cov=85%
---------------IIARGRDWVAVDKPPGVPAGPSLDNATECATyrVARALRRLEttdnddddddeeeedeekkkkkkeeeegghswwggdgdgdgdggtTLTTTHRLDVATSGVLVLARRSSFAAEFNDALRRRRVTKTYecvtaRAVPVGVLEHWteesSGAREGParfeMRELEPGDPRWRDVAADGKYSDDAFvtpdgrklcvlRVLgceetegltkrltkrlageageAGEASRAYVSTIELVTGRTHQIRAQLSAIGCPILGDVLYGGvdlsreggatPRVLRDDDRLCLHAAEMR------------------
>UniRef50_Q86K31(117-381:386) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q86K31_DICDI  E=7e-18 s/c=0.35 id=21% cov=91%
---------------IIFENQYFLVIDKPHGINVGPivDHLHNNFTSFVkDWLKKRNNNNDNNlilynpHNLDSPTRGLFVIAKDFNFLSKFNKLLSDKKVSKKYKAFIPIKENEENIEIKPGIYKHfmeiTNHSPKKLFDEQNQDNSLKECllKVLKVERKEiyvplglkdvsidllqddlqfddigkgdfrkqtkkllFNVVEIQLITGRTHQIRAQLSKLGFPLLSDIMYGGTslnhlitddndiknfESKYYPKMIGLVSFNLSFQCPITNENFNF------
>UniRef50_B5QFC3(1-127:152) Putative ribosomal pseudouridine synthase n=1 Tax=Campylobacter jejuni subsp. jejuni CG8421 RepID=B5QFC3_CAMJE  E=2e-17 s/c=0.72 id=23% cov=58%
----------------------------------------------------------------------ILLCKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAE-EVEVNEPIFTIKVKGGALSKVSKDGLSALSIITPIMMQSKKT-LAKIVIQTGRTHQIRVHAKFIKHGVVGDEKY----AKISSDRMYLHSYEIKI-----------------
>UniRef50_A4BBP0(66-269:270) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BBP0_9GAMM  E=3e-17 s/c=0.44 id=24% cov=84%
-------------IEIFY-DEELLslkplkaellhdagqysVWNKPNGMPLSGTDWGDFNsfERAVELATHGERECYWLTPFDYQAAGVQVLAHSRKAASQLTEQFDPEGLK--------GATLKYRCDVEG----DFNDEGECTTDLEDG-AVSTRFSKVRFDArPNRSVLEAELITGRDDQIRRQLSALRYPVVGDEDYGQNAEEQGLLR--LKCVEVRFTCPMTHETLVF------
>UniRef50_D2B9T7(439-584:621) Pseudouridine synthase n=18 Tax=Actinobacteria (class) RepID=D2B9T7_STRRD  E=3e-17 s/c=0.62 id=26% cov=67%
--------PTMPDL--VY-----LAINKPIGVVSTMSD-PDGRPSLADFVADRTERLFHVGRLDTETEGLILLTNDGELANRLTHP--SYGVQKKYWAKVPGR-----------IERDLGRRLKKGIELEDGIAKADSFTLVQEHGQQ-ALVEVVLHEGRKHIVRRMLEEVGHPVI-------------------------------------------
>UniRef50_UPI000194D267(27-204:270) PREDICTED: similar to RNA pseudouridylate synthase domain-containing protein 3 n=1 Tax=Taeniopygia guttata RepID=UPI000194D267  E=4e-17 s/c=0.51 id=24% cov=79%
---------------VVHREGALLALSKPPGLPILGRPGDLSLDSLLPALRRRLGLAAELHVVKapaREYSGLVLLSSCYHTTKKLHQFFtsarRRGQYPATYRAVTVGVPAEVEGEVSTGLC--------WQQQGDRAMSTLTHYRVLSTTG-GCALLQLQPRTAFPEQLQVHLTLLLCPALGDHKHSSRVGRVLGVPFCL------------------------
>UniRef50_B7FTR4(233-445:497) Predicted protein n=2 Tax=Bacillariophyta RepID=B7FTR4_PHATR   E=5e-17 s/c=0.42 id=22% cov=76%
----------------LYEDTTFIVVDKPPLLPTQPDSSNYVEccpGCVQDNLgpftdiqGNEVVRPLLCHRVDSCVGGCVVLSKDGNGQKVFQEMQRERKLRKLYLAvttqpVPLGMHLHWMWAPQSARGKSggppcqlvshapPESRRKARQFWNRCVLEVVKCEPIKIGKEDSHTYdpagkvhyqsTIRLVTGRKHQVRAQLASLGAPIIRDSLY--------------------------------------
>UniRef50_B0TFD8(70-206:333) Pseudouridine synthase n=18 Tax=Bacteria RepID=B0TFD8_HELMI   E=2e-16 s/c=0.64 id=22% cov=63%
------------------------ALYKPRGVVTT-CKDPQGRQTVIGLLSGVNERVYPVGRLDRDTEGLLLLTNDGQLAFRLTHP--RFGVEKTYRARLRGDVSAG-----------ALKALAEGVQLEDGVTAPAQVRLLRREGD-ATWIEIKIHEGRKRQIRRMGDAIGHPVI-------------------------------------------
>UniRef50_C7ICF2(65-203:235) Pseudouridine synthase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ICF2_9CLOT  E=4e-16 s/c=0.63 id=26% cov=63%
-----------------------IMLNKPVGYVST-SKDQFGRPAVIDLVKDAGKRLYPVGRLDYDTSGLILLTNDGDFTYRLTHP--KHEVNKVYEAVISGFPDKNEIT-----------RFETGLKIDDYQTSPAEFEVLNKKGINT-LVRITIHEGKNRQVRKMCEAIGHKVL-------------------------------------------
>UniRef50_C5KIU2(27-141:142) Ribosomal large subunit pseudouridine synthase A, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KIU2_9ALVE  E=1e-15 s/c=0.74 id=31% cov=53%
--------------------------------------------------------------LDIFTSGIIMVAHTYAAYYQLRHQFKKRAILKKYICLVHGHMDEDSGIIDTNI-QTYSSSSNSRSKHIPISSSSSSYSTIINNNKKVSLLEVEIPTGRTHQIRLHMYHIGHPIVSD-----------------------------------------
>UniRef50_C2D7I2(83-260:285) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7I2_9ACTN  E=2e-15 s/c=0.48 id=25% cov=71%
-------------------NDHVyLLLNKPSQVLTTMSDPFGFPCVASLVPCDDYPGLFPVGRLDSDTTGVLLFTTNGNMGNRLLHP--SHHVWKTYVALIEGKLTssQMQKLSQGIMLEDGMTSPCFIRTITQDEPC-THLDKNHSLFDDmrlnaaSSLCELKIHEGRNHQVKRMLQEIGHPVI-------------------------------------------
>UniRef50_B4U4Q4(90-224:266) Pseudouridine synthase n=15 Tax=Lactobacillales RepID=B4U4Q4_STREM   E=2e-15 s/c=0.63 id=27% cov=62%
-------------------------LNKPRGVISSVSD-DKGRQTVIDLLPQVKERIYPVGRLDWDTSGLLILTNDGDFTDKMIHP--RNEIDKVYLARVKGVVTKESLR---PLTR--------GVVIDGKKTKPARYRIIRVEPDkNRSIVELTIHEGRHHQVKKMFEAVGH----------------------------------------------
>UniRef50_A3BN26-2(130-317:400) Isoform 2 of RNA pseudourine synthase 6, chloroplastic n=2 Tax=Poaceae RepID=A3BN26-2  E=4e-15 s/c=0.45 id=23% cov=74%
--------------------DNYVVLDKPAA-TSVGGATDNIEESCVVFTSRALGLETPLmttHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTtapvsTGIITHYMRPINrAPRLVSEDHIKGWHVCQmeildcKKVPWPSSLIRKVHKvdncgwpQQEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAY--------------------------------------
>UniRef50_B0W634(12-289:493) Ribosomal pseudouridine synthase n=1 Tax=Culex quinquefasciatus RepID=B0W634_CULQU  E=4e-15 s/c=0.30 id=29% cov=67%
---------------------------------VHPcGRYRHNTVVFILAKEYNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEHQIRNRQVQKEYICRVEGEFPESspvsnsanhpaaapaqqqrehtssrssrgkrrrssprtallvvaarhqakhedeerertlggdpsphrpvkkggslnhhtrtaensltsnalprskrclvagggtaddellgmgsntlDGIIECkePIEVVSYKIGVCKV-SPKGKECTTTFQKLGYNG-SSSVVLCKPLTGRMHQIRVHLQYLGYPVVNDPLY--------------------------------------
>UniRef50_Q6CQC4(33-228:299) Pseudouridylate synthase PUS5 n=1 Tax=Kluyveromyces lactis RepID=PUS5_KLULA  E=4e-15 s/c=0.43 id=27% cov=78%
----------EFPLKVqeLWRDKHHVIFNKPPLALSQlPDKRTWYNThdydppVLLDIVQSssgsilkdgtYEPSYYPIHRIDTPVSGGIVYAVNKQSAQQFSRNLRYGgnkgfSLTRKYVAKVGK--SKTANECKEGLIKWNG--------------AITYFQRVDNE-----HLILQLVTGKKHQIRKLTQQvLDSPIYNDLKYGGKKVFDSDFQIALHSAYIR------------------
>UniRef50_C8NNL7(147-291:329) Pseudouridine synthase n=8 Tax=Corynebacterium RepID=C8NNL7_COREF   E=5e-15 s/c=0.58 id=22% cov=66%
------------------EDLEYFVLNKPRGMHSTMSDdlGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGELANRLMHP--KYEVRKTYLA-----------TVRGEAGPNLVTTLRKGIELEDG-PAKADYVQIIDTFQGKSLIRLEIHEGRKHIVRRMLDEAGFPV--------------------------------------------
>UniRef50_Q9SVS0(210-397:472) RNA pseudourine synthase 6, chloroplastic n=8 Tax=Embryophyta RepID=PUS6_ARATH  E=6e-15 s/c=0.44 id=26% cov=71%
--------------------DSYVILDKPAG-TTVGGTTDNIEESCATFASRALDLPEPLkttHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP--IGIISHYM---RPKNMAPRLVAEDSiqgwhlcqlevleckkipwPDAATEKKhdiedCGWTSKEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMY--------------------------------------
>UniRef50_C8WXC0(63-204:273) Pseudouridine synthase n=3 Tax=Firmicutes RepID=C8WXC0_ALIAD   E=1e-14 s/c=0.58 id=31% cov=64%
----------------------VLVLNKPvAYLSTVSDPLGRR--TVMQLLPPIRERVYPVGRLDYDTSGLLLFTNDGELTQRLLHP--SREIEKVYRV-------SVRGIVD----RETRRALMEGVELEDGVTAPAKVEVLRQAdrEDGVAVVHLAIHEGRNRQVRRMFERLGLPVL-------------------------------------------
>UniRef50_Q1M2R1(1-176:186) Putative pseudouridine synthase (Fragment) n=1 Tax=Arcanobacterium pyogenes RepID=Q1M2R1_9ACTO  E=4e-14 s/c=0.46 id=31% cov=59%
----------------------------------------------------------------------------------YQDMFAARKVTKIYEAVARcvdlgalagnlpgvakaeaGHLGEW-VRVDLRLAREPG--AIAVHVAEGEPNAVTYIRKVRqlratpelvpaaadgeaTAPPALALYELRPITGRLHQLRATLNYLGAPIAGDPLYPKvlslEDTAARSFPTQLLAAQLSFVDPVDGEQVHIR-----
>UniRef50_A4QE19(138-282:320) Pseudouridine synthase n=13 Tax=Corynebacterineae RepID=A4QE19_CORGB  E=4e-14 s/c=0.55 id=22% cov=66%
------------------EDLEYFVLNKPRGMHSTMSDelGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGELANRLMHP--KYEVSKTYLATVRGEATN-----------KLVSALRDGVELEDG-PAKADFAQIIDVFQGKSLLRIEIHEGRKHIVRRLFDELGFPV--------------------------------------------
>UniRef50_UPI00004D58A9(3-190:264) RNA pseudouridylate synthase domain containing 3 n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004D58A9  E=9e-14 s/c=0.42 id=27% cov=73%
----------------------LVAINKPQGLSITGKEQEVSVSSLLADLQQHLGLGSDLHIVKaapKESSGLVLLSTCHMTTKRLEDYYAlCRKAQKptaSYCAVMAGVPHPAEGEIKAALKLERiedwqlvvpvTDPSKGRLERREIKRTLTRYKVLD-SADGCALVQLQPMSVFQAQLLVHSTLMFCRILGDHTY--------------------------------------
>UniRef50_Q0AX41(52-196:239) Pseudouridine synthase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX41_SYNWW  E=1e-13 s/c=0.54 id=23% cov=66%
--------------KIIEQTDKIyLLLHKPAGYISSLAD-PQGRPRVIDLLSAVNTRVFPVGRLDYDTEGLLLLSNDGEFSNLMTHP--RYLIPKKYEAWVQGLVKP-----------DTIRQLEQGVALEDGITAPARVRLLS-SKKGQSLLELEIHEGKKRQIKRMCLAVGH----------------------------------------------
>UniRef50_B8DKC4(233-433:463) Pseudouridine synthase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKC4_DESVM  E=1e-13 s/c=0.39 id=26% cov=68%
--------------------------------------------------------PRLLNRLDGPTSGILLAARAPQAAQRFHAAENSGQATKTYIALVHGVLAQPMKVrrgLDTAnrattrvLPQDTPDALRHTMVTPLGIMQTTDIPdaapctptlagdagqdsapasactthapgPACTSGTPCTLVRCVIRKGARHQIRAHLAVLGHPIVGDTRYGTPDgagattmpqGAPHSARlpapatLFLHHARIELP----------------
>UniRef50_B3GZS7(37-191:232) Pseudouridine synthase n=10 Tax=Pasteurellaceae RepID=B3GZS7_ACTP7   E=2e-13 s/c=0.51 id=25% cov=69%
-----------------FEDTVVVLFNKPFDVLTQFTD-EQGRQTLKDFI--PIPQIYPVGRLDRDSEGLLLLTNNGEIQHRLANP--KFEKQKTYLAQVEGIPqaadlAKLEKGVELKDGLTKPAKAKAISAPNYEW--QTAPKIRERKTIPTSWIELKIHEGKNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_C3XHK3(100-239:671) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHK3_9HELI  E=2e-13 s/c=0.56 id=33% cov=39%
---------------------YFCVFNKPSKLLTHPKNLADSK-SILDSLRYYFGKHaNPCHRLDYETSGLLVCSIDKQSEVMLKNLFLQKGVEKSYMAILHGEVKE-----------------------------------------------------------------------------------------------------------------
>UniRef50_C1MJ36(166-477:483) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MJ36_9CHLO  E=2e-13 s/c=0.25 id=29% cov=90%
--------------------DAFVVVDKPAGVNV-GFTVDNAKECVAQCVARALGDAFaengsdssstdsstecsswgwadatpliVTHRLDAATSGVLVLARDVEFARHFNDALRERKVQKTYACVSEARVP--VGVMEHWTDPEDATRGPRRHVMRPPREGDTPWEERGGGGGETStsiaeeraekaaattskqkksqrqkkrerrlakaeefvhpdgrrrcvlrvltceevkipgekagdappryESTVELVTGRTHQIRAQFAASGAPLLGDVLYGGARvgrgtgegeGEGEAPRvlgnddaLCLHASEIRVDvaGPLGRSGTTFKASPPW
>UniRef50_C8WAL4(71-228:279) Pseudouridine synthase n=7 Tax=Coriobacteriaceae RepID=C8WAL4_ATOPD   E=2e-13 s/c=0.49 id=29% cov=64%
-----------------------LMLNKPAGYLTTM-KDPQGRPTIVDMVPTDtYPGLFPVGRLDMDTTGLLFFTTDGQMAQELLHP--SKHVWKHYVAHVVGTPTEEQ-----------LNRLREGIELEDGPAAPAEVEIISDDvkmknllapqglgktggGEPNALVSVTIREGRKHQVKKMLLAIHHRVL-------------------------------------------
>UniRef50_B7RZ07(1-126:143) Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ07_9GAMM  E=2e-13 s/c=0.62 id=34% cov=40%
------------------------------------------------------------------------------------------------------------------------------------RDAVTRFERLdtveipyavdRYPQSRYSLVALQPEQGRKHQLRRHMKHLGYPIIGDAKHGKGVHNRFFaekygcGRLLLACTGMDFSHPVNGDTVHIRAGLD-
>UniRef50_O05668(78-218:256) Uncharacterized RNA pseudouridine synthase ML1370 n=49 Tax=Actinomycetales RepID=Y1370_MYCLE  E=2e-13 s/c=0.55 id=24% cov=63%
-----------------------LALNKPRGMYSTMSddRGRPCVGDLIERRVRGNKKLFHVGRLDADTEGLILLTNDGELAHRLMHP--SHEVSKTYLATVKGAVP-----------RGLGKKLSVGLELDDGPAHVDDFAVVDAIPGKT-LVRLTLHEGRKRIVRRLLTAAGFPV--------------------------------------------
>UniRef50_C1FJP2(89-179:179) Predicted protein (Fragment) n=4 Tax=Eukaryota RepID=C1FJP2_9CHLO   E=4e-13 s/c=0.85 id=23% cov=38%
-------PPVlDHPVDVVAVTDDLVAVHKPATMPVHPTGQYRKNTvlGVLAATRRDLGRLSPAHRLDRNVSGLLLMARNARTASALREALAEG---------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B3U4L2(65-203:420) Pseudouridine synthase n=3 Tax=Bacteria RepID=B3U4L2_9BACT   E=4e-13 s/c=0.55 id=22% cov=63%
-----------------------LILNKPKNVMSTLDD-PEGRPTVKDLLHGVTVRVFPVGRLDFDSEGLMLLTNHGDLAQALLHP--RYHVPKTYLIKVKGVLDDAK--IEA---------LERGVKLEDGFTAPAKVKKVSRAESN-SWLEVTIHEGRKHQVKRMVEAVGHSVI-------------------------------------------
>UniRef50_B6KSS9(288-447:685) RNA pseudouridylate synthase domain-containing protein n=2 Tax=Toxoplasma gondii RepID=B6KSS9_TOXGO  E=7e-13 s/c=0.48 id=25% cov=58%
--------------------------------------------------------PKLLHRLGKEVTGVLLLGRTKQTAQVAVDRLRGGTFGvLTFFALLHGRPPggRREGVIRIPLAENEAGVMVPTAVQRGGSVSVTRWKLLKVASPqtrdvkgdaeqshacGFSLVELEIrHQQCRHQARAHCLYgLSCPIVGDRVYG-------------------------------------
>UniRef50_D2V9L8(180-299:579) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V9L8_NAEGR   E=8e-13 s/c=0.63 id=24% cov=45%
--VEMYDGPIA-PIHVLYEDKDVIVVNKPVGYAVHSSKSKPESETMIYAIRNYVlskekekekskkkskqttntlpLNINLAHRMESQMSGVLICGKNSHSIQKLSEQFLPNTnLQKQYITVC-----------------------------------------------------------------------------------------------------------------------
>UniRef50_B8LBG7(230-481:536) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBG7_THAPS  E=9e-13 s/c=0.30 id=21% cov=82%
----------------VYVDDDLgfTVLNKPGGIPTHSTISNHAEDVVSMYRAslkeergdeAHTPHVSIPIRMEPEMYGLTLASTKKEFCAYITKQLAASKelhdenssngnsipVKKSYRVLVCIKNPDDIDRIEKMVGKtlehyvDPVSPTPKKFVRNKPKSSnhdwqqclmlitsvgDTKFRAACVSSKYTdsndftlahrlwcpdmdhpaedlgvsyvMQLELELLTAKPHQIRGQLAALGCPIVGDTPYGGGTCEMRMHRHM-------------------------
>UniRef50_Q1D5Q2(63-204:745) Pseudouridine synthase n=6 Tax=Bacteria RepID=Q1D5Q2_MYXXD   E=1e-12 s/c=0.53 id=22% cov=65%
------------------ESSYFL-LYKPVGVVTTLSD-PQGRPTVANYVEETGKRLFPVGRLDYDAEGALLFTDDGALAHKLTHP--SFQVPRTYLAKVKGAPDTA-----------TLDKLRGGVRLEDGMATPVSVSVFE-AAERNTWLKIVVAEGRPHLIKRLCAAVGHPVV-------------------------------------------
>UniRef50_B0S1L0(58-199:242) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S1L0_FINM2   E=1e-12 s/c=0.53 id=24% cov=65%
------------------EDKIYIAINKPIGYAS--TVKDKFADKKVVDLIKSDTRVYPVGRLDKDSHGLLILTNDGEFTYELTHPKFEH--KKIYEVLVKGKPNKTE-----------IKQLKDGILLDGYKLKKSKIEFIENVKNDT-KYRVTIFEGRNRQIRRMFDFINHPVL-------------------------------------------
>UniRef50_Q4Q7F2(1-390:453) Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4Q7F2_LEIMA  E=5e-12 s/c=0.19 id=39% cov=81%
----------------------MLVVNKPPGIL-MDGDESIYGRTVESLVCEHMKARGIfdetheqlqkekkrkkqlkfVHQLDFGTSGVLCLAFTKDMAARLAHCFEMRLVRKYYVALLHGHLPsdtalledaassdqpgsafssdtkarrasfaawanacnkAWEGLgcvragcsasasggssansaggdevagfrhllqrpdktaweavglanskdaeegepvtvvhryrshrspasslitvapensapvpadavedliyrtllestttcsvvfVDLPVGYDltDPEHLRMAVTAEQSRDAKTSLLVLKRtylaapppaggevpqrgaiakdspsvTSYPVTLVLLAPHTGRRHQLRVHCRAIGFPIVGDTSYcadlpwctalplgssPSTWVTAGARRMYLHAWRL-------------------
>UniRef50_B6AJ66(2438-2592:2982) Putative uncharacterized protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AJ66_9CRYT  E=1e-11 s/c=0.47 id=21% cov=65%
---------------------------------------------------------------DDEISGPVLISKSDDSYQNLLNQYNEKEIMAEYVFLCHGQLEKHDGYISFeNLATIVCNRIFAKSVTVGSSNCIAKYKVCGIYKHVnstrdsllYSLCRCHSTAGSVNKIRAFMSEIGHPIVCDSKFLNNKQlnadRRLFPHIFFHCWYLEFLKP--------------
>UniRef50_Q1IJT7(65-225:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=2e-11 s/c=0.45 id=21% cov=67%
-----------------------VLLHKPKGYVTTVSD-PEGRETVMDLVKGIPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHA--STHVPKKYLVKVSGEPteeqiqelrngvqlPPEQGHIHAD-PREGGRFGGEKRRSTAVKTAPCKIE-LTREGDNP-WYEVTLNEGRNRQIRRMFDFIGHHV--------------------------------------------
>UniRef50_A5KLG0(62-224:261) Pseudouridine synthase n=8 Tax=Bacteria RepID=A5KLG0_9FIRM   E=2e-11 s/c=0.44 id=22% cov=66%
-------------------------LNKPAGVVS--ATEDKKERTVIDLIKEsKRKDLFPAGRLDKDTEGLLLITNDGQLAHRLLSP--KKHVDKIYYAKIKGIVTEEDVRLFekgVHIGDEKPTMPAAleilSVQKERRKEKIKEQKILPETKnetdekeDGYSEIYLTIKEGRFHQVKRMFRAVG-----------------------------------------------
>UniRef50_C0W3E8(133-287:325) Pseudouridine synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3E8_9ACTO  E=3e-11 s/c=0.46 id=25% cov=65%
-------------------DPDVItvLLHKPAGVVTTM-EDPQGRPTVADLAeqfisehrteLEHPESVRLVHvgRLDTETEGLLLLSNDGDLAHRLMHP--SFEISKTYVAIVEGQV---EGWV--------PRKLRRGIELDDGLAQADRV-VVKDAGPSGSIVEITLHSGKNRIVRRMLDAVGHPV--------------------------------------------
>UniRef50_C5CGJ5(29-164:205) Pseudouridine synthase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGJ5_KOSOT  E=3e-11 s/c=0.52 id=28% cov=59%
---------------VVY------ALNKPRGYLSSMSD-DRGRKTIADLIKGKIPEKvFHVGRLDMDTEGLIILTNDGELARKLSHP--SSKIRKTYVARVTGK-----------LSHHEIKRLENGVVLRDGfKTSGASIRVI-RASLRDTLVEIIIHEGHKREIR------------------------------------------------------
>UniRef50_A0JV58(225-369:406) Pseudouridine synthase n=37 Tax=Actinobacteridae RepID=A0JV58_ARTS2   E=3e-11 s/c=0.49 id=25% cov=64%
-------------------DENMVymVFNKPKGVVSTmedPDGRPCISDFVRN---THGERLFHVGRLDVATEGLLLLTNDGELANRLTHP--SYEVPKTYLVQVRGPFPQGIG-----------AQLKAGVELEDGMASVDSFKLVDSTPGHV-LIEVVLHSGKNRIVRRLFDAVGFPVL-------------------------------------------
>UniRef50_Q38VQ0(53-197:239) Pseudouridine synthase n=6 Tax=Lactobacillus RepID=Q38VQ0_LACSS   E=5e-11 s/c=0.48 id=20% cov=63%
--------------PIRYQTNFYWLLNKPAGVISATTDPQKTVMDLFA-PADYREDLFPVGRLDKDTTGLLLITNDGDLAHDLLSP--KKHVAKTYRA-------KIAGVVTAADQAQFAAGLKLR--DFDAQPAQLTILRTDTARQ-ESLIEVEIHEGKFHQ--------------------------------------------------------
>UniRef50_UPI0001693918(64-203:249) pseudouridylate synthase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693918  E=5e-11 s/c=0.50 id=24% cov=63%
-----------------------ILFNKPKGVITSVSD-PEGRRVVGDFLKGIKERVYPVGRLDYDTEGLLILTNDGEFANMVTHP--RHHVSKTYHATVKGVP---HGSV--------LEKLREGVKLEDGMTAPAEVEYHDIDPDkKQSVISITIYEGKNRQVRRMFEAVGYPV--------------------------------------------
>UniRef50_Q9CKK7(51-200:241) Ribosomal large subunit pseudouridine synthase E n=61 Tax=Bacteria RepID=RLUE_PASMU  E=7e-11 s/c=0.47 id=24% cov=49%
------------------------------------------------------PHVYPAGRLDRDSEGLVLLTNNGEIQHRLAVP--KFNTEKTYFAQVEGIPQETD-----------LAQLRQGVVLNDGKTLPAKVRLVpepnwlwqrnppirERKQIPTSWLEIKIHEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_Q3B289(76-209:250) Pseudouridine synthase n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B289_PELLD  E=7e-11 s/c=0.52 id=21% cov=61%
-----------------------ILFNKPRNVITTSS--DERNREMVLDFIDVNERVYPVGRLDRKTTGVLLLTNDGMLANKLMHPSSN--VKKEYIAVLDAPFPQAS----LPLLT-----GGMRLSDTGEKVSPCQAKIM----GDGSQVWISIHEGKNHQVRRMFKTLGF----------------------------------------------
>UniRef50_B2T6J8(2-152:189) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B2T6J8_BURPP   E=1e-10 s/c=0.45 id=25% cov=67%
---------------------HLLALNKPFGTICQFSP-HETRASLADWVK--VPDVYPAGRLDSDSEGLLLLTDDGALQARIAEP--RHKLVKRYWAQVEGAvdaatLKKLARGVDL---GDYVTRPCRAEYVEPTDALWTRTPPIRfRAAIPTTWIELSITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_B0MSS4(277-431:451) Pseudouridine synthase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSS4_9BACT  E=1e-10 s/c=0.44 id=24% cov=60%
-----------------------LVLNKPKGYVT--SLDDPHADKTVMELVKDacTERIYPVGRLDKNSVGLLLFTNDGDLTRQLTHPsFQKK---KIYQV-----------SLDKPLTKADMEQIAQGITLEDGEIYADE---IAYVKEDKTEVGIEIHSGRNRIVRRIFEHLGY----------------------------------------------
>UniRef50_B8LDC7(264-596:686) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDC7_THAPS  E=2e-10 s/c=0.21 id=26% cov=88%
---------------IVARDDDagYLIINKPPSTPVHArvdnlvenvassvGRmfWMERRESILNQLhddvdrageyddgqatkrkRRKQKIEQLVYvatpqRLDQNTSGLLVVASKKSFASYFAKLLRTKTsgqlvtcriesksdanaeekyyrssscgVHKTYRCLVCVMPSKSSSADDTSIKsmkseveRLRKYSRERTVVRHFLEPSirapkaffstvpkdvynpeswaecllrITNVSDICTVVGNkpsdelavslwgesgkpdecvaVVELEVELLTGRTHQIRGQLAAEGFPLVGDAQYGGavpddcsvwkekckgrAESYLDSEQLALQCCSLEFLNPRY------------
>UniRef50_C3YVI6(172-332:418) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YVI6_BRAFL  E=2e-10 s/c=0.42 id=27% cov=43%
---------------IVYDDGHIVAINKLAGLPVQGqTPEQLSINSLLPELGAALEasDLSIVKPLDWHLSGIVLLARTPEARAEVfnvtKAARQRDKFYRKYWGVVIGNLDPSE---------------------------------------------------------------------------------------------------------------
>UniRef50_C5WHS2(62-202:238) Pseudouridine synthase n=41 Tax=Firmicutes RepID=C5WHS2_STRDG   E=2e-10 s/c=0.48 id=27% cov=22%
------------------------ILNKPAGVVSARSDINH--VTVLDQLseKDRHPDLYPVGRLDRDTEGLVLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B5JTN5(87-249:256) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTN5_9GAMM  E=2e-10 s/c=0.42 id=29% cov=55%
--------------------------------------------------------------------GIVLVAHNRRAAADLSALEEAGKITRHYRLEVLGE-TPPSGSINE----------------------HSEYRRIDYlTALNASVLAVQSTRGTEDPLRERLAAMGHPVLGDDVYGRQDYR---DHLHLKGVGLAFTCPFSGESVHF------
>UniRef50_C5EVC9(101-235:294) Pseudouridine synthase n=6 Tax=Clostridiales RepID=C5EVC9_9FIRM   E=2e-10 s/c=0.50 id=24% cov=23%
----------------------LLVVNKPRGIVCTTSDKDRAMNIV--EYLDYPERIYPVGRLDKDSEGLLLM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1IR68(76-207:254) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR68_ACIBL  E=3e-10 s/c=0.51 id=21% cov=61%
------------------------VVNKPRGLITT-ASDEKGRETIYSLLPPDSPWVAPVGRLDKASEGLLLLTNDSEWAAKITDP--NSHLDKTYHVQVSTLPSEQMVE------------ALSRGIRSDGELLLAKRVSILRAGGKNGWLEIVLEEGKNRQIRRMVAAL------------------------------------------------
>UniRef50_C6UMY1(13-183:235) Putative pseudouridine synthase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMY1_HODCD  E=3e-10 s/c=0.39 id=28% cov=73%
----------------LYEDEQLVVVVKTKRLLACP--VANGGASVVHALAACHAPTslTPAHRLDVGTFGVLAVRKTQARRAHAQRQLSWRRALKMYahLASAIEAAASPASFCVASLA-------------------------LAVGCNSVLAVVTRLVLGRTHQIRASQRR----VWGDVTYATrcllfgafRATHSALKRQSLSACTLQVGHPV-------------
>UniRef50_B6KV93(98-165:435) RNA pseudouridylate synthase, putative n=3 Tax=Toxoplasma gondii RepID=B6KV93_TOXGO  E=4e-10 s/c=0.99 id=42% cov=24%
---------------------------------------------------------------------------------------------------------------------------------DHGKEAETVFKMLHYDEDsDTSLVACIPLTGRTHQIRKHLQILGTSIVGDALY--------------------------------------
>UniRef50_C6JI84(67-202:236) Pseudouridine synthase n=2 Tax=Fusobacterium RepID=C6JI84_FUSVA   E=5e-10 s/c=0.49 id=20% cov=63%
------------------------ILNKP--LEVLSSSKDDRGRKTVVDLINCKERIFPIGRLDYNTSGLIILTNDGELFNRIIHP--KAEIFKEYYVKVLGE-----------IKENNVELLKNGVELDDGITLPANVRILRREKGKTELLVA-IREGRNRQVRRMMDKINHPVI-------------------------------------------
>UniRef50_A6LIA0(310-475:495) Pseudouridine synthase n=23 Tax=Bacteroidales RepID=A6LIA0_PARD8   E=6e-10 s/c=0.40 id=20% cov=64%
------------------ESKVYIVLNKPKNCVTTSDDPQERLTVMDLVKNACQERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPsFKKK---KIYHVW-----------LDKNVAIEDMEKIANGLELEDGEI---HADAISYASeDDKSQVGIEIHSGRNRIVRRIFESLGYHV--------------------------------------------
>UniRef50_C9ZNY1(588-713:727) Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=C9ZNY1_TRYBG  E=6e-10 s/c=0.53 id=32% cov=42%
--------------------------------------------------------------------------------------------------------------------------------RETLKRATTLVRRWSYDEDlDESVVECVLLTGRTHQVRVHLASVGHPIVDDHKYiyhlsrntpftGNYRKEVKSrlppypstiphvasncssvttQGIFLHAWRYTLQYKNSETPETLEAPLP-
>UniRef50_A3HY40(257-396:434) Pseudouridine synthase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HY40_9SPHI  E=6e-10 s/c=0.47 id=21% cov=64%
--------PEKP----VY-----VLLNKPKDFITTTDDPLERKTVMALVGNACEERIFPVGRLDRNTTGLLLFTNDGELAAKLSHP--SNQIKKIYQV-----------TLDKPLTHNDEKDILEGLTLEDGEVEVDDMQVLSVDRK---ILGLEIHVGKNRIVRRIFAHLGY----------------------------------------------
>UniRef50_C5KUW6(3-171:182) Ribosomal large subunit pseudouridine synthase B, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUW6_9ALVE  E=6e-10 s/c=0.39 id=23% cov=71%
-----------PSLDIdqclsdgsIHASPCLFAFFKPRGMETTCTAGSG------LRKFLDRGRLHPVGRLDRDTTGLLLLSSDGDCTNRILHS----TINKTYAALVRGVLPEGLMKkvvsegVDLPDGHVDVTRLETINDGDTVPFGLVAYPLSSIPTNGCSMVRITTTCGRNRVVRRTLCALGHPVL-------------------------------------------
>UniRef50_Q3MC44(92-233:288) Pseudouridine synthase n=21 Tax=Cyanobacteria RepID=Q3MC44_ANAVT   E=7e-10 s/c=0.47 id=23% cov=63%
-----------------------LLLNKPTGVVSTcydPQGRKTVLDLLPEELRKGSG-LHPVGRLDAYSTGALILTNDGDLTFKLTHP--SHNIPKTYQILVKGHPPEA-----------VLKMWREGVLLDGRKTRKAKVSLLESLAEK-SRLEIVLQEGRNRQIRRVAEQLGYPVI-------------------------------------------
>UniRef50_C1F236(89-230:406) Pseudouridine synthase n=8 Tax=Bacteria RepID=C1F236_ACIC5   E=8e-10 s/c=0.46 id=21% cov=37%
-------------------------LNKPKGYVTTVSDpeGRHTVMEFFHGRGKGGERLYPVGRLDYASEGLLLMTNDGALANTLTKA--SSHVEKVYLVKVSGRPTEEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_A2RP35(139-324:328) Pseudouridine synthase n=172 Tax=Firmicutes RepID=A2RP35_LACLM   E=8e-10 s/c=0.35 id=23% cov=80%
--------------QILdYQEYYYYLLNKPQGVVS-ATKDNVFKTVVQLLSEKDFrKDIFPVGRLDKNTEGLLILTNDGALGHDLTQP--KKHVEKEYFARIDGKVTD-----------EIINKFAEGLTLKNGEKARpGELFVEKTYKGDsqsgwVSEIRVIIHEGKFHQVKRMFEAVEMYVL----YLKRirmGNLALDSDLALGAYR-----PLTIEEIE-------
>UniRef50_C0EB54(61-203:248) Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT  E=8e-10 s/c=0.46 id=22% cov=62%
--------------------EHLyLMLNKPQGVVS--ATDDKVHRTVLDLVPPELRRRGlfPAGRLDRDTVGFVLITDDGEfAHNILSP---RHHVPKTYEA-----------GLDGPIGENELSVLAQGVVLGDGTKCRpAELTVLQSGERP--LIQIVIVEGRYHQIKRMFAAVG-----------------------------------------------
>UniRef50_Q87QY8(63-211:238) Ribosomal large subunit pseudouridine synthase E n=244 Tax=Bacteria RepID=RLUE_VIBPA  E=9e-10 s/c=0.44 id=21% cov=67%
----------------------VIIFNKPYDTLSQFTDGDGRK-TLADYI--PVKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQP--KSKSPKTYWVQVDGAPQEQD--LEKLRKGVELKDGMTLPAKVEVIDAPTIWErnppVRFRANIPTTWLAITIIEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_Q15Q67(70-211:241) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q15Q67_PSEA6   E=1e-09 s/c=0.46 id=29% cov=63%
--------------------DGILVmLNKPLGYVcSHDNNeGMRIYDLLPERWEFRNPKIVSVGRLDKDTSGLILVTDDTKLVHQLTSP--KHHVDKVYQV-----------SVDCPLQSDIIDSFAKGVVLGEGAEQclPAKIEIVSENVANVTLNE-----GKYHQVRRMFAACGYHV--------------------------------------------
>UniRef50_A6C4P7(87-222:352) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4P7_9PLAN  E=1e-09 s/c=0.48 id=22% cov=61%
-------------------------LNKPSGFLCT-NNDPAGRRRVVDLFPNDGQRLFTVGRLDENSEGLILVTNDGELAQRLAHP--RYRVARTYHVQVVGNPP-----------REKLDELRKGVRFKEGVFRVSGLKYLKKQGK-SAFLELTLHEGQNREIRRMMARIGH----------------------------------------------
>UniRef50_A2S4Y2(46-195:235) Pseudouridine synthase n=7 Tax=Burkholderiales RepID=A2S4Y2_BURM9   E=1e-09 s/c=0.43 id=25% cov=67%
----------------------LIALNKPFGTICQFSA-HETRASLGDWVK--TPGVYPAGRLDADSEGLLLLTDDGALQAKIAEP--RHKLVKRYWAQVEGAPDAAALAalergVDLGDYVSRPCRARFITPPGALWPRNPPIR--HRAAIPTAWIELEIAEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_C1D9V0(59-229:231) Pseudouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D9V0_LARHH  E=3e-09 s/c=0.38 id=24% cov=74%
--------------------EHLyLILNKPLDLEC--SRKPTVRTGVLTLFPPRYSERGvqPVGRLDADTSGLLLLSDDGQFIHRITSP--KHLVPKTYVATCARPVEPEHL------------RQLLAGVVLNDDPAPVVARSARTLDEHTLELVVT--EGRYHQVRRMIAAVGNH--CDALHRSRIGELVLDGLApgqwreLTAAELAL-----------------
>UniRef50_D1C7P2(63-200:337) Pseudouridine synthase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C7P2_SPHTD  E=3e-09 s/c=0.46 id=19% cov=63%
-----------------------IMLNKPPGYITTVS--DERGRRTVMDLVQVPERVVPAGRLDRPTAGLLLLTNDGDLLFRITHP--RYELEKEYEVLVDGHPPP-----------EVLDQLRRGVTVDGERVVPDQVRPL-RIEEAGTVLRIVIHEGRNRIVRRMMDRVGYPVL-------------------------------------------
>UniRef50_D0MIA1(71-210:268) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIA1_RHOM4  E=4e-09 s/c=0.46 id=26% cov=48%
--------------------------------------------------------LFPVGRLDRNTTGVLLLTNDGELANRLMHP--RYRVEKIYVARTARPVKPEEAE-----------QLRRGVQLEDGPARAVQVAVNPADPH---EIALMIYEGRNRQVRRMLEAIGHEVV-------------------------------------------
>UniRef50_C1DTU8(64-202:247) Pseudouridine synthase n=5 Tax=Bacteria RepID=C1DTU8_SULAA   E=4e-09 s/c=0.46 id=21% cov=62%
-----------------------LAIYKPVGYLSAVGKdrfGRKTLTDFLNELKIPY-KLFPVGRLDYNSEGLLILTNDGEFANKVAHP--RNEIKKVYKVKVAGEVSQ-----------ETLKKMEEGTILEDGFFKPDKIKMLKREEDGT-WLLVEIHSGKKRIIRRFMDSFGH----------------------------------------------
>UniRef50_A9KNY1(68-198:240) Pseudouridine synthase n=3 Tax=Firmicutes RepID=A9KNY1_CLOPH   E=6e-09 s/c=0.48 id=24% cov=32%
-------------------------LNKPAGVVS--ASNDKKQTTVVDLIdEAKRKDLFPVGRLDKDTEGLLIITNDGDLAHQLLSP--KKHVDKVYFA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1GHH2(7-157:221) Pseudouridine synthase n=12 Tax=Bacteria RepID=Q1GHH2_SILST   E=8e-09 s/c=0.42 id=25% cov=50%
----------------------------------------------------DCPGVYPAGRLDRDSEGLMLLTDNGRLQAWISDP--KHKLEKTYWVQVEGIPTE-----------DALKALRQGVDLKDGMTRPAKAELIsepaqlwartppirERKSVPTAWLELKISEGKNRQVRRMTAAMGYP---------------------------------------------
>UniRef50_B9KC52(61-190:240) Pseudouridine synthase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC52_THENN  E=9e-09 s/c=0.48 id=25% cov=59%
-----------------------ILFYKPAGYVT--STRDPHSETIMEFL-PDIKGIFPVGRLDKDAEGLLLVTNDGEfAHRVISPRWK---VEKEYVVKVEGE-----------ITEDKLEKLRRGVSLRDGFFAKAK-HVEKISND---TVKIVITEGKYHQVKRMMAAVG-----------------------------------------------
>UniRef50_B8ET33(75-214:255) Pseudouridine synthase n=29 Tax=Proteobacteria RepID=B8ET33_METSB   E=1e-08 s/c=0.44 id=24% cov=64%
----------------------VIALNKPRGVTCSRKEAGPLVfDLLPPRFRLREPALSTVGRLDKDTSGLLLITDDGALLHRLISP--KHNIAKRYCAKLARPLRGDEAEIFA---------SGEMMLDDEAKPLLP--AVLRVLSPTEAEVSVT--EGRYHQIRRMFAATGNHVL-------------------------------------------
>UniRef50_B9KY92(69-206:282) Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY92_THERP  E=2e-08 s/c=0.44 id=21% cov=63%
-----------------------IVLHKPVGYIT--TTADEYGRKTVLDLVQVPERVVPVGRLDRDSSGLLLLTNDGDLIYRITHP--RYELEKEYEVLVDGFPPP---EVEEALRRGVPVDGRPVRIR--------RLEAIRVEPQGT-VYRVVIHEGRNRIIRRVFERVGYPVL-------------------------------------------
>UniRef50_Q2G8T2(93-235:270) Pseudouridine synthase n=5 Tax=Sphingomonadales RepID=Q2G8T2_NOVAD   E=2e-08 s/c=0.43 id=23% cov=57%
--------------------------HKPSGLITAerdPTGRPTIYTALRNALPQGTPRVMPVGRLDVNTEGLLLMTNDGELKRAL--ELPSTGIPRTYRARTFGDISQARleelmegieidgvryGSINANLERSAGRNKWIELTLTEGKNREVR-RVLEHLGLQVSRL-------------------------------------------------------------------
>UniRef50_A8ZRV1(72-204:241) Pseudouridine synthase n=3 Tax=Desulfobacteraceae RepID=A8ZRV1_DESOH  E=3e-08 s/c=0.46 id=22% cov=56%
-----------------------IALNKPPGYVT--SCLQKQETTVMELVAVD-QRVFPVGRLDKPSCGLLLMTSDGGLHQRLSHPSFDH--EKEY-----------DVACDRPVSDADLDAMRRGMVITGRK---TRPAKVKRLSDR--RFLIILQEGRNRQIRR-----------------------------------------------------
>UniRef50_Q1YVK2(59-197:235) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=Q1YVK2_9GAMM  E=3e-08 s/c=0.44 id=20% cov=25%
------------------ENRYFM-LNKPAGVVS-ATKDSNNSTALDLIFEHRSDELQIAGRLDIDTTGLLLI--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q04T62(76-213:244) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04T62_LEPBJ   E=3e-08 s/c=0.44 id=20% cov=58%
----------------------ILILNKPVGyLCSHGDRF--HEKTVFSLLPLTYKNFKIAGRLDLNSRGLLILTNDGELAQKISHP--SNGSEKEYLV-----------TLNHDPGEKWIQAAFQKGILDAGE--ILRAKMVKLVPGKNCVYRVILAEGKKRQIRR-----------------------------------------------------
>UniRef50_Q1D9N8(86-225:268) Pseudouridine synthase n=4 Tax=Cystobacterineae RepID=Q1D9N8_MYXXD   E=4e-08 s/c=0.43 id=22% cov=62%
----------------------VLAFHKPAGLLSSTERQHRTGTVFEALLPQLPPElagytWHAVGRLDVDSTGLLLFTNDDKLVAHATSP--DAHLPKRYVATVFST---------ASDERVEPLRRGMTLDDGPARPAKVNVRDEHT-------VEVTLTEGRHHQVKRMLGAVGLPV--------------------------------------------
>UniRef50_O32068(62-198:239) Uncharacterized RNA pseudouridine synthase ytzG n=68 Tax=Bacteria RepID=YTZG_BACSU  E=5e-08 s/c=0.44 id=22% cov=55%
--------------------------NKPQGVLS--ATEDSRQQTVVDLLtpEEMRFEPFPAGRLDKDTEGFLLLTNDGQLAHRLLSP--KKHVPKTY-----------EVHLKSQISREDISDLETGVYIEGGyktKPAKAEIKT---NDSGNTVIYLTITEGKYHQ--------------------------------------------------------
>UniRef50_C1XNC4(61-213:257) Pseudouridine synthase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNC4_MEIRU  E=5e-08 s/c=0.39 id=20% cov=68%
--------PSQAHIEVageplVYQKFFYLLLNKPAGYITSTKDPSGTPITALLPEEFWRNDWMPVGRLDKDTEGLLLLTTDGELLHRLTHP--RWKVTKRYYVELASPATPEDVAVFAA--------GTLELEGEPLQPAEL------YLGPDPRKVELVLREGRFHQVKRMFAARG-----------------------------------------------
>UniRef50_A3LZQ0(15-206:265) Pseudouridylate synthase (Fragment) n=1 Tax=Pichia stipitis RepID=A3LZQ0_PICST  E=5e-08 s/c=0.31 id=23% cov=70%
-----------------------VVVNKPSGI--QCSGFKNYAHHLLPQLTKKFKalhpdrtlnasQFKLVHRLDKYVTGGLVVARDRKWAMKSSKSLSSKgnspdSIIRRYVGLlpIPEDDSLKSGWITYDIqapQKDYKGSTETRKVLSY--KALTIFQILDelklqptktqlsmypkiYSGKCIVPIILQLQTGRKNQLRDHtLQSFNTTLLNDD----------------------------------------
>UniRef50_C9LMR9(67-203:239) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR9_9FIRM  E=7e-08 s/c=0.43 id=26% cov=50%
--------------------------------------------TVMDYFRRVRERVFPVGRLDYHSEGLLLVTNDGQLDFILTHP--CHEVQKEYEVVVRGKFSE-----------KLAKKMEKGVKIDSGVTAPCEIEVLGYDAEkNKTRLRMVLHEGKNREIR------------------------------------------------------
>UniRef50_Q4EA08(42-94:98) Ribosomal large subunit pseudouridine synthase D (Fragment) n=1 Tax=Wolbachia endosymbiont of Drosophila ananassae RepID=Q4EA08_9RICK  E=1e-07 s/c=1.11 id=28% cov=25%
-------PNYDIKLDIVYEDEDIIVLSKQSGLTVHPGAG-TNNDTLLNAVIAHLGKIPYSH--------------------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A9AXM1(63-197:728) Pseudouridine synthase n=3 Tax=Bacteria RepID=A9AXM1_HERA2   E=1e-07 s/c=0.44 id=24% cov=62%
---------------------HYVLLHKPS--SVMTTLHDPEGRQTVADLVKSHNRLFPVGRLDYDSEGLLLLTDDGDLTFRLTHP--SFEVEKEYQALLNQTPSVEQ-----------LREWRNGVELDDGKTAPAWIELLNETADGT-WVRVVIHEGRNRQIRRVAEALG-----------------------------------------------
>UniRef50_Q9HX48(5-159:189) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Proteobacteria RepID=RLUE_PSEAE  E=1e-07 s/c=0.38 id=24% cov=65%
-------PPSEPKL---------LLFNKPFDVLTQ-FNDEQGRSTLKDFI--PVPGVYPAGRLDRDSEGLLLLTNDGRLQARIADP--RHKLPKTYWVQVEGTPDEEQ-----------LRRLREGVTLNDGPTLPAEARLLDeptlwervppvrfRKSVPTHWLELVIREGRNRQVRRMTAAVGLP---------------------------------------------
>UniRef50_D2RB61(109-246:284) Pseudouridylate synthase n=2 Tax=Gardnerella vaginalis RepID=D2RB61_GARVA  E=2e-07 s/c=0.42 id=22% cov=50%
-----------------------------------------------------YERIFHMGRLDYDSEGLILMTNDGELSQHVMHP--KYEVEKTYIATVEGKIN----------GMVCRRLVSQGVNLEDGWIKLDRCAIIDQNHD-TTMVKIVLHSGKNRIVRRIFGAVGFPV--------------------------------------------
>UniRef50_A3JIZ1(121-256:367) Pseudouridine synthase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIZ1_9ALTE  E=2e-07 s/c=0.43 id=22% cov=33%
----------------------VLIYNKPEGEVTTR-KDPEGRPTVFDRLPRLREHRWIsIGRLDLNTTGLVMFTTDGELANRLMHP--SSEIDREY---------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q30NZ7(63-199:228) Pseudouridine synthase n=3 Tax=Campylobacterales RepID=Q30NZ7_SULDN   E=2e-07 s/c=0.43 id=31% cov=23%
-----------------------LVIlmNKPHGVVcSHSDSGVLIYSLLPPRWQRRNPKVSTIGRLDIDTTGAILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q49YI4(42-192:232) Pseudouridine synthase n=2 Tax=Staphylococcus RepID=Q49YI4_STAS1   E=3e-07 s/c=0.38 id=26% cov=61%
----------NPELEIVkvndqkidFVNKVYLMLNKPKDYIS--ATTDEQHKTVLDLIEdYRYLDLFPVGRLDKDTEGLLLITNDGQFNHELMSP--GKHVAKTYEVISQKN-----------ITKNDINAFKVGIELNEGlaKPA----KLVQGDELNKSFV--TIYEGRYHQ--------------------------------------------------------
>UniRef50_Q5SLZ5(65-204:243) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q5SLZ5_THET8   E=3e-07 s/c=0.41 id=17% cov=58%
-----------------------VLLHKPPGFVTSRTEGPS-----VYALLQGFPtrDLSPVGRLDKDAEGLLLFTTDGLLLHRLTHP--RHKVAKRYLV-----------HLERPVGPKDQEAFREGILLDGKKTLPAELTPLE----DPTWAEVVLKEGRFHQIKRMFRARG-----------------------------------------------
>UniRef50_D1AL84(43-197:233) Pseudouridine synthase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AL84_SEBTE  E=3e-07 s/c=0.37 id=25% cov=29%
------------------EDNDFVAfdgkriefkeflyimLNKPQDVIS--ATDDERHRTVLDLLEEPLTKVGlfPVGRLDKDTEGLLVLTNDGKMAHEL----------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q8ZPZ1(41-190:221) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Enterobacteriaceae RepID=RLUE_SALTY  E=4e-07 s/c=0.38 id=23% cov=50%
-------------------------------------------------------------RLDRDSEGLLVLTNDGALQARLTQP--GKRTGKIYYVQVEGIPDnaalqALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIR--ERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHP---------------------------------------------
>UniRef50_Q6BNX8(30-298:339) Pseudouridylate synthase PUS5 n=2 Tax=Debaryomyces hansenii RepID=PUS5_DEBHA  E=4e-07 s/c=0.21 id=24% cov=72%
-----------------------LIINKPSGI--QCNGTKSHSNYLLPQLYKQLKahfsannpnyklnpdQYKVVHRLDKYVSGGLIIARGKNAnafRKSFSNQNTNLSVKRKYIGLVpipntvsfkqhlheFGDLKVQhenevrylnrpesvtdkkglifkddsltEGIINFDIVALPKDDRRNKNTGElVTYSALTKFKILHsmsqvptneqisrfpklYKNKTIYPIIIELETGRKNQIRDHiLQAFKVSLLNDDKF--------------------------------------
>UniRef50_A8U325(74-204:387) Pseudouridine synthase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U325_9PROT  E=4e-07 s/c=0.44 id=24% cov=60%
--------------------------HKPDGLVT-SNRDPEGRSTVFDRLPKDLPRVVTVGRLDIDSEGLLLLTNDGGLARYL-ELPSTGWV-RRYRVRVFG-----------PLDEAKLDNLKKGVRIEGVEYGPIEVTIDKATRTN-SWLTVALREGKNREIRRVMEHVG-----------------------------------------------
>UniRef50_C6Y027(298-451:472) Pseudouridine synthase n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y027_PEDHD  E=4e-07 s/c=0.37 id=20% cov=23%
-----------------------VLLNKPKDYITTTDDPQERRTVMQLVEKASRERIYPVGRLDRNTTGLLLM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001C37AA4(65-202:255) 16s pseudouridylate synthase n=2 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA4  E=5e-07 s/c=0.41 id=24% cov=44%
-------------------------------------------------------------RLDKDSTGALLITDDGALAHRICSP--NNHISKIYAA-----------ELSRPFEQEYVEKFAKGIVLANG-EACSPCKVQKaENADNLAFVEL--HEGMYHQVKRMFAAVG-----------------------------------------------
>UniRef50_A7HJ83(75-207:245) RNA-binding S4 domain protein n=3 Tax=Thermotogaceae RepID=A7HJ83_FERNB  E=6e-07 s/c=0.43 id=23% cov=32%
-----------------------IIFHKPSGFVSTTS---DREPSVLNLIDHPYlNELHIAGRLDKDVEGLLILTNDGEFTHNLISP--KKHIEKEYW--------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6W5I1(4-158:201) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5I1_DYAFD  E=6e-07 s/c=0.37 id=18% cov=67%
-------------------------IYKPFNMLSQFSREGDHQ-TLADLGFTFAKDIYPVGRLDADSEGLLLLTNDNFLKTKLLEPRNRHT--RTYYVQVEGEVTdEACRQLSAGVSISINGKQYKTLPAEIAKIAEPELpernpPIRFRKNIPTSWLSVTLREGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_A4BXB5(2-152:181) Pseudouridine synthase n=2 Tax=Bacteroidetes RepID=A4BXB5_9FLAO   E=7e-07 s/c=0.37 id=16% cov=67%
-------------------------VHKPWGMISQFVNPAKRKKTLLGDLYGFPEGTMAIGRLDVPSEGLLLLTTDGKV----SAEIRSNAYEKEYYVQVDGIMTAaalenlKTGVEIGFKGTKYVTKPGKAMLLKDPRFPLRSQKIRDERHGPTSWISIIIKEGKFRQVRKMTAAVGFP---------------------------------------------
>UniRef50_B8BQ39(161-334:370) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ39_THAPS  E=8e-07 s/c=0.32 id=32% cov=23%
---------------------------------------------------------HPVGRLDYDTTGLILFSSDGKLTQRLLHP--RRGVEKEYVATVQGEVNASE---------------------------------------------------------------------------------------------------------------
>UniRef50_UPI000155C728(65-183:258) PREDICTED: similar to RNA pseudouridylate synthase domain containing 3 n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C728  E=8e-07 s/c=0.47 id=24% cov=43%
---------------------HLVTLNKPQGLAVIGKPGDVTVHSVLPELSQRLGFDQPlevVKSAEKESSGLVLLSGCPKTSENLRNYFIwSHRAKRpavTYRAITVGIPNPFEGEVKTAL--------------------------------------------------------------------------------------------------------
>UniRef50_Q7RLQ6(530-636:745) RNA pseudouridylate synthase, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q7RLQ6_PLAYO  E=1e-06 s/c=0.52 id=36% cov=23%
------------------------------------------------------------------------------------------------------------------------------------KPSVTKFMFLSYNYKlNESLLLCQPMTGRTHQIRTHLKSLSFPISNDSHY--------------------------------------
>UniRef50_Q30U38(36-213:312) Pseudouridine synthase n=12 Tax=Epsilonproteobacteria RepID=Q30U38_SULDN  E=1e-06 s/c=0.31 id=18% cov=74%
------NPATDIYegVDVVYvsgkpvtpRDKYtVIVYNKPKGELVTKSDPKERK-TIYDTLPKEYKHYVPVGRLDYASEGLLLLTDASKVASALMES----NLERIYKIKIKGEVTS---EMEAAMLNGMMLDDATAGGHSHSKVTSMEFKPfigykIQKNEPNYSILKVALSEGKNRELRRFFAHFGTDIV-------------------------------------------
>UniRef50_C6X4T2(194-334:371) Pseudouridine synthase n=2 Tax=Flavobacteriaceae RepID=C6X4T2_FLAB3   E=1e-06 s/c=0.39 id=36% cov=26%
--------PEKP----VY-----VLLNKPKGYIST-TKDEKARKTVMDLVANASPyRVFPVGRLDRSTTGVILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q6FCZ3(3-152:264) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q6FCZ3_ACIAD  E=1e-06 s/c=0.37 id=25% cov=63%
----------------------IVVFNKPYDVLSQFREDSAHL-TVSSFIAD--PELRIAGRLDLDSEGLMFLTDHGGLNQYITHPSNKK--YKTYLV-----------QVDGDITEDALEKLRKGVELADGltlPAQATKVEepewlwernppVRFRASIPTSWVEISICEGRNRQVRRMTATVGFP---------------------------------------------
>UniRef50_Q6LQS3(87-221:240) Pseudouridine synthase n=1 Tax=Photobacterium profundum RepID=Q6LQS3_PHOPR  E=2e-06 s/c=0.41 id=31% cov=25%
------------------QDNNpvYIVLNKPKGVVSATKDIKHS--TVLDLIQHSQKnELHIVGRLDFNTTGLVLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q0VQK2(73-205:248) Pseudouridine synthase n=2 Tax=Alcanivorax RepID=Q0VQK2_ALCBS   E=2e-06 s/c=0.41 id=27% cov=27%
-----------------------LMINKPAGVVS--ATRDEHHPTVLELLPRGQREGlHLAGRLDFNSTGLVLLTNDGAWSRRLS---------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6XLQ6(73-210:247) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLQ6_HIRBI  E=2e-06 s/c=0.40 id=19% cov=59%
-------------------------LNKPAGVTCSRKDSGTLITELFpSRWDKRDPLLSPIGRLDKETSGLLLLTDDGQLNHRVSSP--KTQTPKRYHVILDRDLNGDEDSIFAAgelMLESETKPLLPAELSALGKREA----------------ILTLHEGRYHQVRRMFAAVG-----------------------------------------------
>UniRef50_Q4DAY9(171-492:665) Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DAY9_TRYCR  E=3e-06 s/c=0.17 id=30% cov=72%
----------------------LLVIHKPAGVPTHAGGRYfmnsctamleyvlapkrlrawllqrdpmlqsivstryltetECQELLAYYMVKDEGSMaeyvsierlpRPCYRLDKVTSGVLLLGVSQAATRRVGEALTRKTkqmeevflwklrliasddkkttrvggvhsieertlrefnvgVRKRYLARVHGYFPndashalhscrvrkenagdgdhrttekvffitiptnptirrcdavkeEALGVVGPPVllasrlmqfkFRDGDTTEEPPARDQEGKqqrepfyqDAATFCQPLRYFtsgsgqaSEGESLVHCVPFSGRMHQIRMHLSDWGHPIIGD-----------------------------------------
>UniRef50_B5YJH7(83-202:237) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJH7_THEYD  E=3e-06 s/c=0.45 id=19% cov=49%
-------------------------------------------------------RIYPVGRLDFDSEGLLLLTNDGELAYKVMHP--SSQIEKTYMVKVDGIVEPE--TIE---------KLRKGIKIEGKLAVPVSVHLVKKLKAN-SWIKITLHEGRKRQIRKMLERVGHPVI-------------------------------------------
>UniRef50_Q1MQ05(67-232:270) Pseudouridine synthase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ05_LAWIP  E=3e-06 s/c=0.33 id=21% cov=49%
----------------------------------------------------------PVGRLDFFSEGLLLITNDGELTQRLTHP--RYHISKVYHVLIRERI----------LNTTLKNISKGITLSDGTKLPPAKVRVLSSITEtNTTWLEITLQQGINRQIRRMCKELGLTIL-------------------------------------------
>UniRef50_C9RK28(65-205:243) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK28_FIBSS  E=4e-06 s/c=0.38 id=20% cov=23%
----------------------VIMFHKPAGCVCTKDDPQGRR-TVYDYLPPGYHNFKYVGRLDLQSRGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D0J9Y2(76-150:255) Pseudouridine synthase n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0J9Y2_BLASP  E=5e-06 s/c=0.72 id=24% cov=34%
-----------------------ILLNKPKGYIT-STRDPFNRKTVMNLIpNFQNYRIYPVGRLDRLTTGVLLLTNDGFITEKLTHP--KYKIQKIYLVV------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3M7K0(3-152:262) Pseudouridine synthase n=13 Tax=Acinetobacter RepID=A3M7K0_ACIBT   E=5e-06 s/c=0.36 id=23% cov=66%
----------------------IVILNKPYDVLSQFRKDEAHM-TVSDFV--DDPTLRIAGRLDMDSEGLVFLTDHGGLNQFITNPANKK--YKTYLVQVDGDVTEEALE---QLRKGVELNDGMTLPAKAIKVSEPEWlwdrdpPVRYRASIPTSWIEISICEGRNRQVRRMTSAVGFP---------------------------------------------
>UniRef50_A9NHG2(54-198:231) Ribosomal small subunit pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHG2_ACHLI  E=6e-06 s/c=0.37 id=23% cov=37%
--------------EVIYKENVILSFYKPAGYLS--SHKAEIYPSLFELIGAPYNQYdlKIAGRLDYDSEGLVILTTSGDLVHQITHP--KKKIRKVYEA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q3J464(61-203:508) Pseudouridine synthase n=15 Tax=Bacteria RepID=Q3J464_RHOS4   E=6e-06 s/c=0.37 id=28% cov=66%
-----LAPPEPARLW-LY--------YKPEGLVT-SASDEKGRETVFDHLPEGMPRVMSVGRLDLNSEGLLLLTNDGELKRRL-ELPSTGWLRK-YRVRVKGNPT------DADL---EPLRKGITVEGESFQPMTVS---LDRVQGANAWLTVGLREGKNREIRRAMSALG-----------------------------------------------
>UniRef50_C6VS09(12-165:225) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS09_DYAFD  E=6e-06 s/c=0.35 id=24% cov=25%
------------------------IINKPPNMVSQ--FVSSHDVRLLGELDFDFPEgTHAVGRLDSMSEGLLILTTNKKV--------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B4W9R3(151-290:519) Pseudouridine synthase n=2 Tax=Brevundimonas RepID=B4W9R3_9CAUL   E=7e-06 s/c=0.38 id=28% cov=37%
--------------------------HKPAGLLTSHSD-PTGRPTVFDALPAGLPRVISVGRLDLATEGLLLLTNDGELSRAL-ELPATSLV-RQYRARARGKITQEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_D1N1S2(68-201:241) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1S2_9BACT  E=8e-06 s/c=0.39 id=23% cov=61%
-----------------------IMLNKPRGYVCTNADPHADLKAVDLIRLTPPLRLFSAGRLDKDSEGLILFSNDGDYVARLTHP--RHEILKVYQVRVRREFKPAELE------------QMRRGVLERGELLKVHA--VSRCGDCT--YLITLNEGKNREIRRLTAALGSP---------------------------------------------
>UniRef50_B6IXC3(96-229:551) Pseudouridine synthase n=2 Tax=Alphaproteobacteria RepID=B6IXC3_RHOCS  E=8e-06 s/c=0.39 id=26% cov=62%
--------------------------HKPDGLVTT-ARDEKGRPTVFDNLPPELPRVVSVGRLDLTSEGLLLLTNDGALARHL-ELPVTGWL-RRYRVRVHGAPDEAQ------IAKLAQGIIIEGIEYG---PIET---VVDRSVGANTWLTVSLREGRNREVRRVMEHLGLPV--------------------------------------------
>UniRef50_Q73PD9(64-206:245) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73PD9_TREDE  E=8e-06 s/c=0.37 id=24% cov=22%
-----------------------LMFNKPQGCVTSTSDPVH--KTVMDYIKAPFDRMtlFPIGRLDIDTEGLLII--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1J0B9(70-198:253) Pseudouridine synthase n=5 Tax=Deinococci RepID=Q1J0B9_DEIGD   E=9e-06 s/c=0.41 id=23% cov=58%
---------------------------KPAGYVTT-ARDEYGRRNVLSAM-PPIPGLHPVGRLDKDSEGLLLLTTDGQLTLTLTHPRYGH--EKAYRAWTAGQPVAAELRV-----------LETGIELADGPARALSARPARGGA------LVTLTEGRNRQVRRMLDAIGYPV--------------------------------------------
>UniRef50_C6XB83(278-427:455) RNA-binding S4 domain protein n=2 Tax=Methylophilaceae RepID=C6XB83_METSD  E=9e-06 s/c=0.35 id=24% cov=58%
-------------------------------VLVHPDN-HWAEDPVQKEFRRGFlKGLAPAGRLDIDSTGLLVLTQDGRVARQLIG--EDSQTEKEYLVRVEGTLS------DEGLRKLNHGLSLDGVQL---KPAKVSWQ-------NEDQLRFVLREGRKRQIRRMCELVGLHVVG------------------------------------------
>UniRef50_O96270(119-301:338) Pseudouridine synthase, putative n=2 Tax=Plasmodium RepID=O96270_PLAF7  E=9e-06 s/c=0.29 id=23% cov=69%
-----------------------IVLHKPKGLLCTSNdeKNRKSIYTLFPEEMLQKYRLVTVGRLDRNTSGVLLLTNDYAWVNKLTHPKYQRI--RTYR-VHIEGPVKMNALKELargiYLEEDEKTQPKKIYNYKESReksniddkkkkkmskmkkktnPAFIEIlreekIKIKEDTKKITVLNISIKEGRNRQIRKMFQQINQPVI-------------------------------------------
>UniRef50_C5KJS4(53-232:267) Pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KJS4_9ALVE  E=1e-05 s/c=0.29 id=20% cov=77%
-----------------------LLMHKPAGYVVSRDDPL-NRDTVFQLLPDPSVYIGASGRLDKDTTGLLLLTNDTYLQSSLVDPVYK--VPKVYRVVVKG----------AALNGAQLMALRSGVSLEDGPTLPALVEPLDVNGDPLPLemseydrykckqLNITLWEGRNRQVRRMVEAVGSTV-------RDLCRIQLGPFSLHAA--GVPNPGDVRQLTI------
>UniRef50_C6XQT2(98-177:508) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQT2_HIRBI  E=1e-05 s/c=0.65 id=26% cov=37%
--------------------------HKPKGLVTT-NSDPEGRPTVFEHLPKKLPRVMTIGRLDLNTEGLLLLTNDGELARTL--ELPTTGLKRCYRARAFGKITQAE---------------------------------------------------------------------------------------------------------------
>UniRef50_D0SE82(57-195:244) Pseudouridine synthase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SE82_ACIJO  E=1e-05 s/c=0.37 id=19% cov=62%
-----------------YREKVYIALNKPQGYecshqATHHFSVFDLFDDVL--LNRGIQC---VGRLDQDTTGLLLLTDDGQFLQALTHP--KKHVAKVYRMKTADPVTDEQ---------VQQLEQGVELRNEKGSFAATDVKRLAE-----CELQMTVHQGVYHQVKRMLAAVG-----------------------------------------------
>UniRef50_Q9HZ55(78-214:386) Ribosomal large subunit pseudouridine synthase B n=67 Tax=Gammaproteobacteria RepID=RLUB_PSEAE  E=1e-05 s/c=0.38 id=22% cov=38%
----------------------VLIYNKPEGEVCTRDD-PEGRPTIFDRLpRLRTGRWINVGRLDINTTGLLLFTTDGELANRLMHP--SYEMDREYAVRVRGEVTEE----------------------------------------------------------------------------------------------------------------
>UniRef50_A0M7H0(119-258:295) Ribosomal large subunit pseudouridine synthase F n=4 Tax=Flavobacteriales RepID=A0M7H0_GRAFK  E=1e-05 s/c=0.37 id=24% cov=25%
------------------EKPEYILLNKPAGFFVT-GNPEKGGKTVMELVARtTSAKVSPVGKLDNQAKGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A8BNG7(136-408:568) DRAP deaminase n=2 Tax=Giardia intestinalis RepID=A8BNG7_GIALA   E=2e-05 s/c=0.19 id=27% cov=81%
----------EPPIlaqPVL-RDEgDHVFCEKPASMPVHPcGKYCYHSVNELVAspdtKLTTKKSLRACNRIDKLVSGLIVMADSSKEAEQKRNEIVERGNVKVYLAncrmvstdisprrvcLIWGPmglrfkgnytsrcihfnthtelfganlerLDKYNECIEqltacshsfgkgvtfmrdkemlwfqdsdtysrfvsskkctallQDLIAVQLDPTQSMADIGEHQAAITVIEYVHVdSSTQTALAMCVPITGRTHQLRLHLQAAGTPIHNDPSHGGLQAN--------------------------------
>UniRef50_A9ITY6(182-321:588) Pseudouridine synthase n=6 Tax=Betaproteobacteria RepID=A9ITY6_BORPD  E=2e-05 s/c=0.37 id=23% cov=63%
----------KPPRVILY--------HKPAGeIVSHDDPGGR--ASVFARLpKLRTGKWLSVGRLDLNTEGLLIFTTSGDMANRIMHP--RYGTEREYAVRVLGEMDDA-----------TRKSLVEGIELEDGQAA---FGALDYLGGDGSnrWYRVTLQEGRNREVRRMFESVG-----------------------------------------------
>UniRef50_Q1RJR2(63-195:229) Uncharacterized RNA pseudouridine synthase RBE_0321 n=15 Tax=Rickettsia RepID=Y321_RICBR  E=2e-05 s/c=0.39 id=26% cov=35%
----------------------LWIYYKPVGLITTH-KDPLSRKTVFEQL-TGLPRVISIGRLDLNSEGLLLLTNNGD----LARQFElpSSKLKRVYHVRAYGNP-------------------------------------------------------------------------------------------------------------------
>UniRef50_A5ZYR1(73-206:315) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A5ZYR1_9FIRM   E=3e-05 s/c=0.38 id=18% cov=23%
----------------------LLLFYKPRGIVC--STKKQRQETTVTEFLDYPVRVYPVGRLDKDSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D1BMI6(38-194:232) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BMI6_VEIPT   E=3e-05 s/c=0.32 id=24% cov=59%
----------DTHIDI---DVDIVAVDgkvvsttqlyyvkfhKPKGYVT--AVEDSNHPVVMDLLPPEFIKMGvvPVGRLDKDTEGLLLLTNDGVWGHSIIN--GNKHVPKIYYV-------EFEGT----LSDEGIQRIKKGILLGDGtqcKPAEIEFVSLHS-------VHVTIEEGKYHQ--------------------------------------------------------
>UniRef50_B9JSE7(148-278:704) Ribosomal large subunit pseudouridine synthase B n=4 Tax=Alphaproteobacteria RepID=B9JSE7_AGRVS  E=3e-05 s/c=0.39 id=30% cov=21%
--------------------------HKPSGLVTT-NSDPEGRPTVFDNLPEELPRVMSIGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C7LZX4(63-196:254) Pseudouridine synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZX4_ACIFD  E=4e-05 s/c=0.38 id=19% cov=58%
------------------EQREYWLLNKPRGVVS--SVVDPEGRPTVRSLVATTSRVYPVGRLDVDSEGLLILTNDGPLTYQLTHP--RFHVPKEYLVW-----------VDRPVPRRLGRELREGVEVDG--------ELLRASSVGTvgpRLVRIVLTEGRNRQIRR-----------------------------------------------------
>UniRef50_UPI0001745920(62-198:235) putative pseudouridylate synthase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745920  E=4e-05 s/c=0.37 id=29% cov=32%
-----------------------IMLHKPVGYLS--ATRDPQHPTVIDLI--DHPARETLHiagRLDRSSSGLLLLTNDGRWSRRLTEPGEK--VDKVYL--------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q00UF3(334-427:428) Chromosome 16 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q00UF3_OSTTA  E=4e-05 s/c=0.54 id=27% cov=41%
-------------------------------------------------------RVWAVNRLDAPVSGVWLCATSVKASLKAREWLSKpGTSTKTYLARVSKgsALTTPDGglRIDAPLWKNaKTSVAELRPESEGGKPCATRIFLLE----------------------------------------------------------------------------
>UniRef50_C1DA59(516-653:703) Pseudouridine synthase n=6 Tax=Betaproteobacteria RepID=C1DA59_LARHH  E=5e-05 s/c=0.36 id=26% cov=21%
-------------------------------------------------------------RLDVNTSGLLIFTTSGDLANRMTHP--SFEVEREYAVRVLGKLTPEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_B1ZYI5(2-153:188) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1ZYI5_OPITP   E=5e-05 s/c=0.33 id=18% cov=67%
----------------------LCALHKPYGVLSQftPEPGSRWRTLAEFGL---PPAVYPLGRLDADSEGLLLLSDEPGLNTRLLNPDQAH--RREYW-VQVERVPTDAALAQLQRGVKIGDYATRPCAARRLDPAPTlpprDPPIRARKNVPDCWLALELIEGKNRQVRRMTAAIGHP---------------------------------------------
>UniRef50_A1K3P0(324-472:500) Pseudouridylate synthase n=3 Tax=Betaproteobacteria RepID=A1K3P0_AZOSB  E=5e-05 s/c=0.34 id=25% cov=45%
-------------------------------------------------------------RLDIDSTGLLVLTQDGRIARQLIG--DDSKVEKEYLVRVEGEL------VDDGLALLNHGL---SLDDKPLRPAKVEWI-------NEDQLRFVLKEGRKRQIRRMCELVGLRVVG------------------------------------------
>UniRef50_B7VP37(70-207:241) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=B7VP37_VIBSL  E=5e-05 s/c=0.36 id=18% cov=63%
-----------------------ILMHKPAG--TICSNIDEVYPSLFNYLELEKAsELHIAGRLDADTTGLVLITDDGRW--SFNITLPTKSCKKVYRVILSRD-------IKDDVADKFKAGIQLQGEQKLTRPAELEVITSK-------EVLLTITEGKFHQVKRMFAAVGNRVVG------------------------------------------
>UniRef50_A6Q895(7-158:188) Pseudouridine synthase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q895_SULNB  E=6e-05 s/c=0.33 id=19% cov=38%
----------------------LLVLNKPKGYVVTRSDelGRKTVYDLLPDWAFHDGWM-PIGRLDLESKGLLLFTTDGKIGDALTRP---GNCIKVYEIWVRGHVTDEH---------------------------------------------------------------------------------------------------------------
>UniRef50_B4RA72(216-350:521) Pseudouridine synthase n=4 Tax=Caulobacteraceae RepID=B4RA72_PHEZH   E=6e-05 s/c=0.37 id=22% cov=37%
--------------------------HKPVGLVTTH-KDPQGRPTVFEALPEGLPRLISVGRLDLNSEGLLLLTNDGGLARAL-ELPATGVV-RRYRARAHGRITQER---------------------------------------------------------------------------------------------------------------
>UniRef50_Q21EB0(66-198:249) Pseudouridine synthase n=14 Tax=Gammaproteobacteria RepID=Q21EB0_SACD2  E=6e-05 s/c=0.37 id=23% cov=58%
-----------------------IMLNKPAGRVS-ATKDSTHPTVVGCLPQQLQANIHIVGRLDFNSTGLMLLTNNGAWSRHLTSP--ENKVNKIYEVELERTINDDEW----PQYISAFASGMYFAFEDlTTQPAK-----LERLT--ATRARVTLVEGRYHQI-------------------------------------------------------
>UniRef50_Q3Z8C8(72-210:249) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=Q3Z8C8_DEHE1   E=8e-05 s/c=0.36 id=23% cov=62%
-----------------------LMLNKPPEIVST-TSDELGRKTVMDLLHRRYEGAGlfPVGRLDETTTGLLLLTNDGELTNRLTHP--SYEIEKEYL-----------ISIDAALTQADKESLEKGMLLDDGLTSPARLsRVTDEPPYNY---KLIIHEGKKRIVRRMFAHLGYQI--------------------------------------------
>UniRef50_A8SIK9(49-196:235) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIK9_9FIRM  E=8e-05 s/c=0.33 id=32% cov=26%
--------------EILF-DDEIVIykeftylmLNKPKDFIS--ATFDTKLPTVLDLLEFPYSNMElfPVGRLDIDTTGFLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q03AT5(45-194:236) Pseudouridine synthase n=8 Tax=Lactobacillus RepID=Q03AT5_LACC3   E=0.0001 s/c=0.33 id=27% cov=36%
----------DGPLEV----DYLM--NKPAGVIT--ATEDPTQSTVLDLIRPHdyRPGLYPVGRLDKDTTGLLLLTTDGNLGHALLSP--NRHIAKTYAA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_B7G3Y8(60-204:217) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3Y8_PHATR  E=0.0001 s/c=0.34 id=22% cov=47%
-------------------------------------------------------RIFPVGRLDKETSGLILLTSDGRVPNAVLR--GRHKQPKIYQVWVDRPVlaKDVAQLRDGVIITTVAQRDGNRAEPLTARTKSCAVQVLGREK-----LQLTLVEGRNRQIR------------------------------------------------------
>UniRef50_B9HLH3(202-303:397) Predicted protein n=5 Tax=Magnoliophyta RepID=B9HLH3_POPTR   E=0.0001 s/c=0.48 id=29% cov=37%
-----------------------IALNKPKGYIC--SLGEKESKSVMCLLDDYFqswdkrnpglpkPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSN--LSKEYIATVDGVVSKRH---------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001BC54DC(81-200:239) ribosomal large subunit pseudouridine synthase B n=3 Tax=Fusobacterium RepID=UPI0001BC54DC  E=0.0001 s/c=0.41 id=29% cov=23%
-------------------------------------------------------RIFPVGRLDYRTSGLILLTNDGDL---FNRMMHPRaEIFKSYEVLAKGHLTKEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_C1FHS6(67-204:248) Predicted protein (Fragment) n=4 Tax=Mamiellales RepID=C1FHS6_9CHLO   E=0.0001 s/c=0.35 id=17% cov=48%
-------------------------------------------------------RVFPVGRLDRDSSGLVLLTDDGRVPEALLDP--SRKAPKTYEV--DVRPAPTPDAIEAlRDGVVITTTQQRDGVTTTSPTAPCPVDLIKKSETSATL-RFELREGRNRQIR------------------------------------------------------
>UniRef50_C6UMX9(18-133:167) Putative RNA pseudouridine synthase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMX9_HODCD  E=0.0002 s/c=0.42 id=25% cov=42%
----------------------------------------------------------PAHRIDALTSGLLVLERKLARLRLSLRRK-------TYLCLSHDAFAACaRCRVTTWIRRR--SAWKCCVSYVACLEAVS----------GLALLGVTLVTGRNRQLRRQLA--------------------------------------------------
>UniRef50_B0T1Z8(89-224:501) Pseudouridine synthase n=1 Tax=Caulobacter sp. K31 RepID=B0T1Z8_CAUSK  E=0.0002 s/c=0.36 id=32% cov=21%
--------------------------HKPSGLMTTHND-PKQRPTVFQALPRDLPRLISVGRLDLNSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C7RHU0(64-191:233) Pseudouridine synthase n=3 Tax=Anaerococcus RepID=C7RHU0_ANAPD   E=0.0002 s/c=0.38 id=13% cov=58%
---------------------------KPRGYIT--SNFDPYNDRDLNDLVKLDQRFFAAGRLDKDSEGLLIITNDGIFTNQIIHP--SKKLDKTYIVRVSRLLNKEEC----------QQFESGIDIGDSEMTSDSRIELIDKTSKTY---KVTIHQGYNRQIRRMFAY-------------------------------------------------
>UniRef50_B1KQS3(41-202:239) Pseudouridine synthase n=20 Tax=Gammaproteobacteria RepID=B1KQS3_SHEWM  E=0.0002 s/c=0.30 id=22% cov=63%
----------------VHENNHIrleggqrltarasryIMLHKPADTLS--SNVDGDHPSVFNFInLEHTSELHIAGRLDADTTGLLLITDDGRWSfNVFNPKYHCEKVYRVYL------RDSIEGEIAGEIDAELKARFKQGLDLQ-GEQALTLPAKLEFVSPK--EVLLTITEGRYHQ--------------------------------------------------------
>UniRef50_Q2NSN0(65-198:235) Pseudouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q2NSN0_SODGM  E=0.0002 s/c=0.36 id=20% cov=59%
-------------------------LNKPQGYVC--STDDPDHPTILYFIDEPVPdKLHAAGRLDIDTTGLVLLTDDGQWSYRLTSP--RHHCEKDYLV-----------TLEQPLAAEITAQFAAGILLRGEKLPT---RPARLATLSPLKVRLTISEGRYHQVKRMFAAVG-----------------------------------------------
>UniRef50_B8BRE9(2-144:221) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRE9_THAPS  E=0.0003 s/c=0.33 id=20% cov=54%
-----------------------------------------------------HSKLHAIGRLDADTTGLLLLTNDGGLVHWITNPTSKQDsdpIPKTYEAVIMGH--HYLPQCDGPFTNNDNNTYPLMTLIQNGALLPQKYgghtrpvdrlSVLSHPTRSTTRVSITISEGKNRQIRRMFHAIG-----------------------------------------------
>UniRef50_B8KTF1(149-295:311) Pseudouridine synthase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KTF1_9GAMM  E=0.0004 s/c=0.32 id=21% cov=59%
---------------------HYIMLNKPSGVVC-ATRDARHRTVIDILDLPFQHTLHIVGRLDIQSTGLVLLTNDGQWSRRLS--LPQSKFAKHYRVTTEQAITSEQ-------IAGFEAGIFFAYEGLTTRPARLHLI-------NSHEANVTLTEGRYHQIRR-----------------------------------------------------
>UniRef50_B7G1Y5(97-217:286) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G1Y5_PHATR  E=0.0005 s/c=0.39 id=22% cov=51%
---------------------------------------------------------HAIGRLDAETTGLLLLTNDGGLVHHvtnkdsVSHQHHGNPVFKTYEALVMGFYDNHS-----PLLEKMRTQGVNIGDKYGGTTrPVDELIVKTNPTLKSTLVSLTICEGKNRQIRRMFHALG-----------------------------------------------
>UniRef50_Q0C148(70-211:372) Ribosomal large subunit pseudouridine synthase F n=9 Tax=Alphaproteobacteria RepID=Q0C148_HYPNA  E=0.0007 s/c=0.33 id=22% cov=37%
-------------------DNQLsVILNKPVGYVSgTPEPGeipairlisEENLSGSAHAIPQRSNKMAPLGRLDKDSHGLLILSEDGVLAKAIIGPLSD--MDKEYLVKVRG---------------------------------------------------------------------------------------------------------------------
>UniRef50_C4FYR8(94-315:326) Pseudouridine synthase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYR8_ABIDE  E=8e-61 s/c=1.06 id=34% cov=96%
--------PENIPLDILYEDEDVILINKPKGMVVHPAAGHYTGTLVNALMYHCRDnlsgingelRPGIVHRIDMDTTGVIIACKNDVSHRIIAEQLKEHSIKRKYQAIVYGVFKDEEGRIEGSIGRSKTDRKKMAVI-PDGKPAVTHYRVIRNYtspnGNNFAHIECELETGRTHQIRVHMTSIGHPLLGDEIYGAAKNPFKLDGQALHAEMLGFVHPRTGEYMEFHAPLP-
>UniRef50_C9KPZ8(75-292:308) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPZ8_9FIRM  E=1e-60 s/c=1.07 id=36% cov=96%
--------PEDIPLDILYEDSDIIVINKARGMVVHPATGIYTGTLVNALLYHckdlsginGEIRPGIVHRLDKDTSGVMVAAKNDAAHLDLAEQIRTKAAHRIYRAIVCGNIREEAGVIKGDIGRHPTDRKKMAIVHEHGKPAVTHFRVLERFG-AYTLVECRLETGRTHQIRVHMASIGHPVLGDPKYGPRKACPFAiKGQALHSLQLTLTHPRTREVMTFTAPLP-
>UniRef50_B1I3F8(74-292:309) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1I3F8_DESAP   E=4e-60 s/c=1.06 id=34% cov=96%
-------EPEAIPLEVCFEDPDVLVVNKPRGLVVHPAVGHYSGTLVNALLHHCRDlsgingilRPGIVHRLDRDTSGLLMVAKNDAAHLALAGQLKDRAVLRRYTALVHGRPRRETGTVDAPIGRHPRDRQRMAVTPRSGRAARTHYRVVRRF-DKFSLLELTLDTGRTHQIRVHMAHVGHPLVGDLKYGHARPELGLEGQFLHAGTLGFRHPRTGEVLVFEAPLP-
>UniRef50_A9CFZ5(10-222:222) Pseudouridine synthase n=3 Tax=Rhizobiales RepID=A9CFZ5_AGRT5   E=6e-60 s/c=1.09 id=50% cov=98%
-----YNPPLDPWLTIVHRDDDLLVLDKPSGLLSVPGRDPALSDSLMTRVQKQFPKALMINRLDKDTSGIVLMSLNRKAHAAIAAQFEKRETRKSYVAIVWGTVAGEEGEVDLPLAIDPDNKPRHRVDHENGKPAQSLWRVLERLPLPATRLALTPLTGRTHQLRVHMKALGHPILGDEFYAEGEALTAAPRLMLHAQEVGFRHP-DGRDVTYTVPCPF
>UniRef50_B2UL66(72-292:323) Pseudouridine synthase n=2 Tax=Verrucomicrobiaceae RepID=B2UL66_AKKM8  E=7e-60 s/c=1.05 id=38% cov=96%
--------PQDIPLDILYEDEDVVVINKESGMVVHPAAGNPDGTIVNALLHHcgdlsgigGVERPGIVHRLDKDTSGCLVIAKNDGAHQSLTAQFAARSTEKRYLAVVQGIPSQSSGTVFTHIGRHPVNRLKMAVVNPGsGKAAITDYDLLCADPsTDSSLVLCTLHTGRTHQIRVHMLYLGHPLIGDPIYAKPaRQKAKPGRLMLHAWRLGFDHPRTGKRMDFEAPVP-
>UniRef50_Q2LWV4(80-308:333) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWV4_SYNAS  E=2e-58 s/c=0.99 id=36% cov=96%
--------PQDIPLSILYEDHDLLVLDKPAGLVVHPAAGHVSGTLVNALLFHcrdlagigGVMRPGIVHRLDKDTSGLLVVAKTDAAHQGLALQFKKHQVGKTYQALVYGDPREKTGQIDLPVGRHPVERKKMSTKSRRGKEAATRWRIAERFGV-ATLLNVDIVTGRTHQIRVHLAAIGHPVVGDAVYGSSKRATTLtdpavkgrlkemSRQALHAARLSFTHPVTHKILEFHAPLP-
>UniRef50_D1Y3Y9(112-328:345) Pseudouridine synthase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3Y9_9BACT  E=3e-56 s/c=1.01 id=37% cov=95%
---------QDMPFDVVYEDDDVIVVNKPAGVVVHPGAGRPDGTLVNGLMFRYPEigrigdsvRPGIVHRLDVGTSGLMVVARSDAAFRGLTEAFQAHEVLKEYLGLGVGALKAPEGTVDAPIGRDPRNRLKMCVSW-DGRDAVTDYKVLWTRA-RCNLIRVRLHTGRTHQIRVHMRALGCSLDGDTLYGpkDPAQHILKDRVFLHSWRLGFRHPVSGERLEFRAPLP-
>UniRef50_D1ANU4(72-289:305) Pseudouridine synthase n=14 Tax=Fusobacteriaceae RepID=D1ANU4_SEBTE   E=7e-56 s/c=1.00 id=32% cov=95%
--------PENINIKILYEDSDIAVIDKEAGIVVHPSHGHESGTLVNAVMYHikdlsginGEIRPGIVHRLDKDTSGLLIIAKNDTAHLRLSEMFGSSGIRKTYIAILKGKINKESGKLETLIGRDPKDRKKMAVVKTNGKTAITYFQVLDKN-EKFSLVKVNIQTGRTHQIRVHMKYLGYPVLGDSVYG--RDNKIAGRQMLHAYKLEFLHPVTQKAMKIisELPQDF
>UniRef50_Q2SS88(92-306:322) Pseudouridine synthase n=4 Tax=Mollicutes RepID=Q2SS88_MYCCT   E=8e-56 s/c=1.01 id=31% cov=95%
----------DIDLNIIYQDDDLLVINKQNNITVHPSLNNTNNTIVNALLASDVElssingelRPGIVHRIDKQTTGLLIVAKNDKTHKLLSEMFKNHQIYKEYLAIVTGVIKPNKGLIDAPIGRSQTDRKKMSVTAKNSKHAITTFEVVERFLKN-TLIKCQIQTGRTHQIRVHFNYINHPVLNDPIYGKKHQEFTDFGQYLHAYKLKFTHPITKKEIELISPLP-
>UniRef50_C6XFD0(86-327:340) Pseudouridine synthase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD0_LIBAP  E=2e-55 s/c=0.90 id=36% cov=96%
---------ENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHnnlssingvKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHgkstRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVkgiDDKTADSAITHYQTIEIYNKNsnfaVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKgfktkanivnnnaKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIP-
>UniRef50_A9NGF1(62-286:297) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGF1_ACHLI  E=1e-54 s/c=0.96 id=36% cov=98%
-AKEETNPlkPKNIDLNIVYEDDDIMVINKPKGLVVHPSETFSETTLVSGLLHHtdtlsthndDPLRPGILHRIDKDTSGLILVAKTNEAHKILAQDLKSHDIKREYIALVEGVLDHNKGVIDAPIARHPKIRTKMAVVA-TGKPAITHFEVMRTFRDH-TLLHCKLETGRTHQIRVHLAYIKHPVTGDPLYGTK-AKILKDGQLLHAFRLEFVHPITKKVMMLEAPLP-
>UniRef50_UPI0001C42CC7(85-310:322) hypothetical protein BpOF4_01845 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42CC7  E=2e-54 s/c=0.95 id=33% cov=97%
--VEVYVPPEPkneslrpecIPLDIHYEDDHLLVINKPQGMPTIPSREHPSR-TLANAVMGYYESHHIpftfhaVNRLDRDTSGLLVVAKHGLAHDQLSKGQRAGKLKRYYLALAEGFVQPREGTIHAPIKR-RPSSIIERMVAADGQEAITHYKVI-NDNQAYSEVEINLETGRTHQIRVHFAHLGHPLLGDDLYGGSIE--LLARQALHCQRVELIHPFTGKHLHFSAPLP-
>UniRef50_Q12L72(14-230:230) Pseudouridine synthase n=17 Tax=Shewanella RepID=Q12L72_SHEDO   E=3e-53 s/c=0.97 id=49% cov=100%
MQVFNYQPPSIPWLDIRYLDRDIIVINKPSGLLSNPGRAPETYDTAITRLQRLYPETILIHRLDCDTSGIMIFARNKKAESNLKTQFQNRQAKKVYIAEVSGCFEHQDGKVNFPLGPDPMTPPFQQVI-ESGKPALTYYRLLEHRA-STSLVELKPHTGRTHQLRVHMKALGHTIIGDEFYGDETVIAASHRLNLHAQSLTLLHPFKQIEIQFFSQHPF
>UniRef50_B7GLK3(76-285:292) Pseudouridine synthase n=11 Tax=Bacillaceae RepID=B7GLK3_ANOFW   E=5e-53 s/c=1.00 id=32% cov=94%
---------EPIPLAIVYEDDYVIVINKPPHMSTIPSREHPHGTLANALLHHYEQQQlqttvHVVTRLDRDTSGLVLVAKHRHVHHLLSEQQKQGRVKRRYEAVCHGYVIQLVGTIDAPIGRKGDSIIEREVRL-DGQRAVTHYEVLQQKNE-MTHVSIQLETGRTHQIRVHFSHIGHPLVGDDLYGG--LREHIDRQALHSCELTFFHPFFEKTMTFHAPLP-
>UniRef50_Q31HX2(29-228:241) Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HX2_THICR  E=8e-53 s/c=1.04 id=48% cov=92%
---------------VLYEDDDIIVVNKPAGLLSVPGKDLDPEMNLLAQVQKHVPTALIVHRLDMDTSGIMILAKHKASHRHLSIQFQDRLTEKTYQAICFGKPSTSQGHLNLPMRCDWENRPLQIIDLKQGKAASTHWKLTAQY-DNAFEVNLTPVTGRSHQLRLHMKMLGHPILGDNLYADPQSFAASKRLLLHAASLKVTHPVTKKTMLFEHP---
>UniRef50_Q67N67(61-306:327) Pseudouridine synthase n=1 Tax=Symbiobacterium thermophilum RepID=Q67N67_SYMTH  E=5e-52 s/c=0.84 id=32% cov=98%
VAQEGRVEPEPIPIQVVYEDPWLLVVDKPAGMVVHPVR-DYVSGTLANAVAHHLlrsgsdPVARPVQRIDRETSGLVLFAKDPAVAGLLARELERQKLERRYVAVVEGAVAADAGTVDRPIRRVWGHPVAREVAegprtpeqerllaeaaaqgralredwTAAGQPAVTHWRVLRRWP-AATMLELRLETGRTHQIRVHMAYLGHPLLGDELYGG--SRTLIQRQALHAATLAFVHPVTREPVRFTAPLP-
>UniRef50_B1XN95(335-538:538) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XN95_SYNP2  E=1e-51 s/c=1.00 id=43% cov=92%
---------PEIPLEIIYEDHSLIAIHKPAGLPSIPGRSSQTYDSAFSRLRRDYQDIFLVHRLDQDTSGILLFAKNAETQQDLQTQFRRRKIHKEYEALLEEKIQRPEGMITLPLWADPGDRPRQKVDAQRGKPSETYFVKLDSH-----RLKLKPITGRTHQLRVHCAHpngLNNPILGDRLYGNRA----APRLHLQATALTFMHPETKNPHTIQSAPEF
>UniRef50_O67638(77-301:316) Uncharacterized RNA pseudouridine synthase aq_1758 n=3 Tax=Aquificaceae RepID=Y1758_AQUAE  E=2e-51 s/c=0.90 id=36% cov=94%
--------PENIPINIIYEDEDIAVVEKPCGLVVHPSPGYTSGTLVNALLYHikdlssigGVERPGIVHRLDKETAGVMVIAKNNTAHRNLVRQFQERKTEKFYKVLVKGLVKKDYGAIDTPIARHPVDRKRFWVRKE-GKEALTEYWVLKRYEKYeITLLKVKIHTGRTHQIRVHFASIGHPVLGDRTYGFKSSSVPKELLslmgecnMLIAYHLGFYHPTKGEWMVFE-----
>UniRef50_D1CBT6(86-298:313) Pseudouridine synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBT6_THET1  E=9e-51 s/c=0.95 id=35% cov=92%
-------------LRVVYEDDKIIVIDKPAGMVVHPSPGHYDNTLVNALIARYpdllkqpTDRPGIVHRLDKDTSGLIIVARDLDTLNYLQGQMKARKIFKEYTLLCCGALDPPEGRIEAPIGRDLRDRTKMSVIA-GGKEAVTEYSTIQSLGK-YTLAIARPITGRTHQIRVHFAAIGHPIAGDPIYGNCRLE-GLNRQFLHASRLGVVMP-NGEYKEWHSPLP-
>UniRef50_C0EHV8(75-286:299) Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHV8_9CLOT  E=1e-50 s/c=0.95 id=33% cov=95%
--------PVPGPFDIAYEDDDLLLVNKPAGTPVHPSPG-HYEDSLANYSAWQYAQrreqlvFRPVNRLDRGTSGLLCVAKNAHAQARLSQQLHTGAFERIYYAVVCGAPSPAAGTIDLPIGRTPGSVLKRRVDPQGAR-AVTHYETVRVNG-AYTLLKIRLETGRTHQIRVHFAHLGCPLFGDFLYGT-ERRDVVEGHALHSGEIRLLHPISGEEIRCSVPLP-
>UniRef50_A5ZUU7(76-286:293) Pseudouridine synthase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUU7_9FIRM  E=3e-50 s/c=0.95 id=29% cov=95%
--------PTPLNIPVLYEDEDILVVNKPADMPVHPSLGNYTNTLangVAAYLetKGESCPFRCINRLDRDTSGALILAKNALSAAILSVQMRNRQISRTYLAVVEGIPRQ-SGTISAPISRAADSVIERRIDFENGESAITHYQLLEV-KNNHSLLEIHLETGRTHQIRVHMGYIGHPLPADYLYNP--VYDTFKRQPLHSLQLKFCHPITGTPMCLMAPVP-
>UniRef50_C0MA80(75-273:300) Pseudouridine synthase n=6 Tax=Streptococcus RepID=C0MA80_STRE4   E=3e-50 s/c=1.01 id=34% cov=87%
-------------LDIVYEDEHFLILNKPAGYASIPSAI--HSNTIANFIKAYYikqdypnKQVHIVTRLDRDTSGLMLFAKHGYAHARLDKQLQQRAINKRYYALVCGQErLPDQGEIIAPIGR-TDDSIITRTVTPKGKYAKTSYKVIARYPENVSLVDITLHTGRTHQIRVHFAHLGFPLLGDDLYGGR-LDLGMTRQALHCHHLSFTHPFT------------
>UniRef50_C2L1H2(77-329:335) Pseudouridine synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2L1H2_9FIRM  E=7e-50 s/c=0.79 id=30% cov=100%
MEEENSAPPYDFPLDIVYEDRDILLLDKPARLPCHPSPGHFEKTLAGAIVFYQMQNssassfvCHFIHRLDLDTSGLILLAKNRLAASVLNKDMKEGRIQRSYLAFCQGNPEFSLGEIQgftrleekkkkefnyafaisAPIARVEEEKMLRTVNFQKGQEALSYFNVLNYFPEkNYSLLQLQLATGRTHQIRVHLSYLSCPLLGDSLYGNGEEsvfsqNIGLSRQALHSYSISFTHPIRKEKMFFqrELPPD-
>UniRef50_Q8ZFU1(95-303:320) Ribosomal large subunit pseudouridine synthase C n=102 Tax=Gammaproteobacteria RepID=RLUC_YERPE  E=3e-49 s/c=0.94 id=36% cov=93%
---------------ILFEDDYLLVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFlELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKSMQKDYLALVRGQWQSHCKAIQAPLLKNIMQSGERVVkVSSEGKPSETRFKIEERF-EHATLVKASPVTGRTHQIRVHALHAGHPIAFDDRYGYREfdqqlQGTGLHRLFLHAAALRFEHPNTGETMRIEAPLD-
>UniRef50_Q2G4F0(103-312:436) Pseudouridine synthase n=12 Tax=Alphaproteobacteria RepID=Q2G4F0_NOVAD  E=2e-48 s/c=0.92 id=37% cov=93%
--------------MVLEKDRAAIVLNKPPGLATQGGSGtHEHVDGLLDaYVNEGEARPRLVHRLDKDTSGVLLIARTPGSAAFFSKRFSCRSARKIYWALVVGVPDVKDGLIELPLAKQPGTGGEKMMVDESgqGQSARSRYRVISRAGNAAAWVELQPLTGRTHQLRVHMAAIGHPIVGDGKYGGQAAFltgSISRKMHLHARRLRIEHPE-GDMIDVTAPLP-
>UniRef50_D1AV01(78-277:297) Pseudouridine synthase n=2 Tax=Bacteria RepID=D1AV01_STRM9   E=3e-48 s/c=0.96 id=31% cov=88%
----------------VYEDKYLAIINKYAGMVVHPSKGHEEDTLVNAIMYKikdlsginGDLRPGIVHRLDKNTSGLIIIAKDDKTHFKLSEMFKNKEIKKIYYAIVKGKVNKKSGRIETMIGRNPNDRKKMAVV-DNGKLAITNFEVID-SNEKFSLLKVDLETGRTHQIRVHLSHFFFPILGDSVYGRKDE---YDRQMLHAYMLNFIHPITLEKIDV------
>UniRef50_B7VRG6(353-563:563) Pseudouridine synthase n=4 Tax=Vibrionales RepID=B7VRG6_VIBSL   E=3e-48 s/c=0.91 id=45% cov=91%
-------------FDIVYEDDEIVVVNKPEEFLSVPGKFIE--DSVYTRIKARYPDATgplIIHRLDMSTSGLLILALTAESNKHIQKQFIDRTVEKRYTALLDGEIDGKSGDISLPLRGDITDRPRQLVCHEHGRNAETHWEAVSTNNGK-TKVHLYPKTGRTHQLRVHCAHpsgLGVPIRGDDLYGYKRE-----RLHLHAGYLKLIHPTTGEWIEFEVPSEF
>UniRef50_B2J8D4(364-571:575) Pseudouridine synthase n=7 Tax=Cyanobacteria RepID=B2J8D4_NOSP7   E=4e-48 s/c=0.93 id=43% cov=93%
---------EEVTLPIIYEDEWLIAVNKPPGLLSVPGRYRDRQDSVLSRLRHLLPDGmalASVHRLDQETSGILLLARDRQTHKQLSQQFQQRQVHKVYEAILSGVAIAEKGVIDLPLWGDPENRPYQKVDWQNGKPSLTQFQVISREQD-YTRIEFTPLTGRTHQLRVHAAdvrGLGITILGDRLYG---CDAVTSRLYLHARELDFEHPQLKKTLYLKA----
>UniRef50_B1XXM0(115-338:369) Pseudouridine synthase n=6 Tax=Burkholderiales RepID=B1XXM0_LEPCP   E=6e-48 s/c=0.86 id=32% cov=93%
---------EAMTLAVVHEDAHLLVIDKPAGLVVHPAAGHWSGTLLNgllahHAAAAHLPRAGIVHRLDKDTSGLMLVAKSLQAHTALVRAIAARDVKREYLALVHGAVMDGLQVIDAPLGRDPVSRVRMAIVAS-GKPARTDVRRLAvaelpgdgvrqlpgatRAPRQVSAVHCQLHTGRTHQIRVHLASRGHPLLADAMYGGAPA-FGLQRQALHAARLHLLHPIDGRPLAFE-----
>UniRef50_P44433(99-308:322) Ribosomal large subunit pseudouridine synthase C n=22 Tax=Gammaproteobacteria RepID=RLUC_HAEIN  E=7e-48 s/c=0.91 id=33% cov=93%
--------------QILFEDDCLIILNKPSGIAVHGGSGLNFGVIEALRALRPEARFlELVHRLDRDTSGILLIAKKRSALRNLHEQLRVKTVQKDYLALVRGQWQSHIKVIQASLLKNELSSGERIVrVSEQGKPSETRFSIEERY-INATLVKASPVTGRTHQIRVHTQYAGHPIALDDKYGDKDfdkqmNELGLNRLFLHAFSIRFEHPKNGETLRFNASLD-
>UniRef50_C6VRD0(76-285:300) Pseudouridylate synthase n=4 Tax=Lactobacillus RepID=C6VRD0_LACPJ   E=1e-47 s/c=0.91 id=33% cov=93%
------------PIDILYEDRDYLIVNKPAGVASVPAHALPD-NTLANRVKGYYQAahydnevVHITTRLDRDTSGIVLFAKHHFAHSIIDHQLKAHAMRKMYLAVVSGELTTDHGWLDAPIGRAADSFIK-RTTRPDGKPSLTEYWVVKRLC-NMTVVRVRLHTGRTHQIRVHFAASGHPLIGDALYGGPR-DPWIQRQALHCMRLEFDDPFISQTLTTFAPLP-
>UniRef50_A5ZGG0(355-590:590) Pseudouridine synthase n=4 Tax=Bacteroides RepID=A5ZGG0_9BACE   E=1e-47 s/c=0.81 id=46% cov=93%
----------DTELEIVFEDEWLVVVNKPSGMLSVPGK-EEDMDSVYHRLKEKYPDatgPMIVHRLDMATSGLLLVAKTKEVHQHLQAQFENRSIKKRYIALLDGCITETEettnqttgntrktekvratevisttgkvGRIELPLCPNPLDRPCQSVDEEHGKEAITEYQII-TNSEKHTRIAFCPLTGRTHQLRVHAAHpkgLNCPILGDELYGKK-----ADRLYLHAEYIEFRHPIYGDIICIQKEPDF
>UniRef50_C6VN18(74-284:293) Pseudouridine synthase n=3 Tax=Lactobacillus plantarum RepID=C6VN18_LACPJ  E=2e-47 s/c=0.91 id=35% cov=93%
----------EQPIQIEYEDANWLVLNKPAGLTSVPGPSNR-TDTLVNRIKGYLiashasnQRPHLITRLDRDTSGLVLVAKHRVAQGMLTEPRIAAQLVKTYQAWIEGTITPASGTIDRPIGRVADSPRR--VVTTAGQRAITTYQVeADQLQHNVSRLRLELVTGRTHQIRVHLTALGHPLLGDTLYGG--NLAWIQRQALHAASLQFFDPFSEQTLHFEAALP-
>UniRef50_C5VJ38(360-571:571) Pseudouridine synthase n=2 Tax=Prevotella RepID=C5VJ38_9BACT   E=4e-47 s/c=0.90 id=46% cov=91%
-------------LQILYEDDYLAVVVKPSGLLSIPGKGcQASIYSILCERWKGKSDAFMVHRLDMATSGLLVVARTSEVHKALQAQFIGRTVKKKYVALlplsILEKQLPAEGRIELPLSPDPDDRPRQRVDRTNGKPAITEYRLIGKTTYGkealeAVKIALYPLTGRTHQLRVHCAHpdgLGTPIIGDNLYGQR-----AERLWLHATHLEFTHPITQERMSFDTPL--
>UniRef50_Q03E91(75-284:294) Pseudouridylate synthase, 23S RNA-specific n=2 Tax=Pediococcus RepID=Q03E91_PEDPA  E=4e-47 s/c=0.90 id=31% cov=93%
----------DGPLDIIFEDKNWLLVNKPAGLTAVPGPSDR-EDTLVNRIKGHWQaiesknmMPHLVTRLDRFTSGITLVARHQVSNSLLSEQVAHHKIKKIYLAMVDGVVQAEKGTFNQSLG--LAADGIHREVRDDGQQATTSFKVLKRF-ENQTLVQIHLKTGRTHQIRVHFANAGHPLVGDQLYDGPMDR-GIKRQALHASSIRFFDPFIDEKVSFTAELP-
>UniRef50_A8IAL9(148-358:384) Pseudouridine synthase n=2 Tax=Xanthobacteraceae RepID=A8IAL9_AZOC5   E=1e-46 s/c=0.89 id=34% cov=93%
---------------ILFEDKDVLVLNKPSGIAVQGGSGtFRHIDGMLDALRaKDGQKPRLVHRIDKDTAGCLLIAKNRLSAAQLAKNFRSREARKIYWALVPGVPKPRQGRISTYLAREeaEERMRVARHGEEDASHAVTYYAVVEHAAQKMSWLSLKPVTGRTHQIRAHLAHIHHPIVGDPKYFNIEnwelPGGLQNRLHLLARRLVIPHPRGEGMIDVSAPLP-
>UniRef50_D1PDP7(342-556:556) Pseudouridine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PDP7_9BACT  E=3e-46 s/c=0.87 id=47% cov=91%
----------------LYEDRELAVIYKPEGLLSVPGKDAAQ-PSVYALMRRKYQEATgplIVHRLDMATSGLMIIAKTEFAYHRLQKEFLNHRVQKKYVAIVCGKDKESCnrilkeaeggrGYISLPLIADFLDRPRQMVNREQGKEAITEYEVLERIDDTHLRLALYPKTGRTHQLRVHCAHqegLNAPIIGDPLYG----NEPATRLHLHAEEITFEHPMTGKKMTVTRKADF
>UniRef50_D0LUH1(94-285:303) Pseudouridine synthase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUH1_HALO1  E=6e-46 s/c=0.96 id=34% cov=88%
-----------PRFKIVFEDRDLVVVDKPAGLLSAPTPESDLGN-LAALLRERRERVYVVHRIDLQTSGLLVFAKTRRANQHLSERFREHQIERAYTAVVAGAPVEDTFTIDLPL---------------RGRRATTHLQVLQRIGERAAVLDARLETGRTHQIRLHCLQRGYPVLGDPQYGERmSDELTPPRMALHARVLGFEHPRSGEARRFESELP-
>UniRef50_Q0ANT2(91-303:330) Pseudouridine synthase n=2 Tax=Hyphomonadaceae RepID=Q0ANT2_MARMM   E=2e-45 s/c=0.86 id=34% cov=91%
---------------VIYQDDELIAFNKPAGLAVQGGsKTTRHLDGMLDAFGEGLDRPRLVHRLDKDTSGILIVGKGPKATARLAKAFQSHKTRKTYWAIAIGVPKPKMGEIKGFMRKaaasgvdsERETMVAAGHGDEGAQHALTRYVVIGEAGQKASWVALRPVTGRTHQLRVHLAAMGTAILGDKKYtcHRPAPEDLGRRLCLHARRLEIPRP-GGKPLVLTA----
>UniRef50_Q2GEQ1(78-286:330) Ribosomal large subunit pseudouridine synthases, RluA family n=4 Tax=Neorickettsia RepID=Q2GEQ1_NEOSM  E=5e-45 s/c=0.88 id=32% cov=90%
------------PLDVRYEDDCLLVIYKPAGLVVHPGIGNREQ-TLVNILEHHYPteklssldssRPGIVHRLDKDTAGFLIVAKTNPAHLSLSQMIKEGVIRREYLALVHSVPASLSGEIKKPIKR---GQRKMMIGRCSGKPALTYYGVIARTVDRkCSLVHCRLGSGRTHQIRLHMKSIGCPVVGDKLYGlNRDADLCAPHHALWAYSLQFRHPFTRKNMAF------
>UniRef50_UPI0001C36F41(69-273:446) hypothetical protein RflaF_04377 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36F41  E=8e-45 s/c=0.89 id=31% cov=92%
-----FLEP-NPDLDVpaVYESDGVIVFNKPSGMPVHPS-IKHQGDTLGNKFAAMFPDltFRAVNRLDRDTSGLCVVAKNALAANALQ-----GRCEKVYYAAVTGEIPE-TGTIDAPIARERES-IIIRCVREDGQRAVTHYRRIAYNG-RYSLAEIHLETGRTHQIRVHFSYIGHPLAGDDLYGGTRCD--IGRQALHCGQMSFTDPVTGEEVTVRAELP-
>UniRef50_Q2SK59(100-294:315) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=Q2SK59_HAHCH  E=3e-44 s/c=0.92 id=33% cov=86%
----------------LFENDELLIINKPCGVAVHGGSGVSFGVIEILRAARQDIRFlELAHRLDRDTSGVLVLAKKRRALVQFHDMLKTGRVEKIYHAWVCGKWPKHKSVITAPLKKNVLRSGERMVnVSEDGKPSETRFRVL-YSGAGRTLVEAQPITGRTHQIRVHAKFAGHPIIGDDKYCDSETNRvyrdmGVKRLCLHAYSLRMSWP--------------
>UniRef50_C8WV14(83-294:314) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV14_ALIAD  E=5e-44 s/c=0.84 id=32% cov=94%
-----------PPVRVLYNDPSLLVVDKPENLLVHRdGSDAPTLDACVQRLLneEGAGRAYHVHRLDRGTTGCVLYAKHGLMLRAMDAELAAGRVRRTYLAIASGT-RIRPGVMSAPIGRDRHVSGRYRVSR-TGKVARTHVEVLDEAdqgGARWTLVRLRLETGRRHQIRVHLSAMGAPVVGDTLYGGTPHPALAPGQiALHAARLQFCHPYAGEDVEVRAPLP-
>UniRef50_Q38Y05(70-288:296) Pseudouridine synthase, 23S-rRNA-specific n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38Y05_LACSS  E=5e-44 s/c=0.82 id=33% cov=97%
--VQNYELDATQSFSVLFESDDLLIVNKPAGIKTHPNRPGENGTLmnqVAFYLAQQGKKAYMVHRIDEATSGTLLIGKTPIVIGILNRQLSQKKMARQYIAIVDDPKHElaEHATINSPIGVDPENDRQRCVDYINGLSAITHYRVLSRKG-ATAVLAVDLETGRTHQIRVHLASIGHPILGDPLYNPTDT---TPRLLLHGQTLRYTEPYTDQPRTVTAPVP-
>UniRef50_C9AAU2(81-279:284) Pseudouridine synthase n=4 Tax=Enterococcus RepID=C9AAU2_ENTCA   E=6e-44 s/c=0.90 id=31% cov=89%
--------------DVLFEDEHLLVLNKPAGVKTHPNQPLEADTLLndaAAYLAPKQQQPYVVHRLDKETSGVVLFAKNPLVLPILGRMLENKQIFRRYQATVWGKLTQDQ-TIAKKIGRDRHDRRKRIIDPRNGQSAITHV-TIAHTQQKTTDVYCVLDTGRTHQIRVHLASIGHPVVGDPLY----QNKPAPRLLLHGYELHLEHPFTKEQLVIIA----
>UniRef50_D1BPK7(74-279:288) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK7_VEIPT   E=2e-43 s/c=0.86 id=33% cov=92%
---------EKGPITVLYEDAHTLVVNKDPFMLVHPA-GQTKSCTLSNYVAGYYakknvvHKVRPVHRLDRDTSGCILFGKTKEAQQYYTDELQAGRIDRIYTGLVEGRIDA-NGMVDAPIGVDPVFDNR-RVIDELGQPAQTEYIVLDHEGDN-TLLRFKLLTGRTHQIRVHMEHIGHPIVGDAMYGTR--NKPYIRQCLHASELTFVPYGKDEAITITC----
>UniRef50_A7HIF3(102-335:350) Pseudouridine synthase, RluA family n=6 Tax=Cystobacterineae RepID=A7HIF3_ANADF  E=3e-43 s/c=0.76 id=29% cov=97%
-------EPDTPQvFDVVHDDGALLVVDKPAGLPVHPtARYSANTFTSLARARFPDRKVDPAHRLDRETSGLLACGSAPEWTSRMKRDFAQGRVKKTYLAIAEGAPREDTFTVDAPLALTGASAVRVRMhVDAGGLASATDFEVLARRvlagGVPVALLACRPRTGRQHQIRAHLAHAGLPMVGDKIYGPDEnifdrftrhaltdedhARLRLPRHALHAWRLELPHPRTREPVGLESPLP-
>UniRef50_B9YDX4(79-287:295) Pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDX4_9FIRM  E=7e-43 s/c=0.84 id=27% cov=92%
--------PWAIPVRILYEDELILAVSKPAGMIVHPDNKGKTG-TLANAVAAYYLRTgqhctvRPIHRLDEGTSGIVLFSKCPFFQPKLDQALAQKQIARTYLAVVSGVMKPKDRlTLDKPIGRDRHNAKAYRI-SPTGKPAVTHVEVLrCRQKEKQTLVRCQLETGRTHQIRVHLASIQRPVVNDPLYNPRPVQG---RMKLHAWKCAWTDLVSGRQVEIT-----
>UniRef50_A3I3R5(66-276:279) Ribosomal large subunit pseudouridine synthase n=2 Tax=Bacillaceae RepID=A3I3R5_9BACI  E=1e-42 s/c=0.83 id=33% cov=94%
-----YKPTPVCAIDIVYEDDHCLIVSKPKGMATHPNDDRDTHTCMNHVIAHiqqqGGMYAEHVHRLDKGTQGLLLVAKHPLAKSIFDRMIEEKSIIRTYAAEVQGNIRSSSGTISESIGKDRHHASR-RVVSKTGQHAVTHYEVVSRY-KNSCVVHLILETGRTHQIRVHLAYIGHPIIGDTMYGARET--VSDDYELHAIQLEFDHPFLNKRITVK-----
>UniRef50_Q0C3G8(95-323:349) Pseudouridine synthase n=2 Tax=Hyphomonadaceae RepID=Q0C3G8_HYPNA   E=2e-42 s/c=0.76 id=37% cov=92%
---------------IIHEDDDMLAINKPAGLAVQGGSGqGRHVDGLIAGMDVDGHRPVLVHRLDKDTSGVLLLAKHPAAAARLTELFRSREMDKVYWAVTVGVPSPQAGQIRCWMVKgvpdinepsgyrpvdpyatkrrdgDRERMIRSAQGVEGARHSITDYVVVSTAGPKAAWVAMRPETGRMHQLRFHMLEMNTSILGDYKYKSRREvpQGLAEGLHLHARALIIPreH---GKPIKIVAPLP-
>UniRef50_Q0AFD5(116-337:354) Pseudouridine synthase n=3 Tax=Nitrosomonas RepID=Q0AFD5_NITEC   E=2e-42 s/c=0.78 id=32% cov=92%
----------------LYQDDYLLVINKPAGTAVHGGSGISYG--VIEQLRKQRPDWkflELVHRLDRETSGVLLLARKRQTLLELHKQIREGTVRKHYLTLVRGKWKNSLQNVRLPLYKYLTAEGERRVAIATGRNDHDKVQqaytlfALQKNWEAFSLLDAELKTGRTHQIRVHLAHLGFPIAGDDKYGDFGLNRQlqkddgsglvLKRMFLHASVFVCTHPVTGELLRLEAPLP-
>UniRef50_Q31IZ8(10-232:252) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q31IZ8_THICR   E=4e-42 s/c=0.78 id=33% cov=94%
-------------FKILYQDDSLVAVHKPAGLLVHRSPIDRHETQFAVQMTRDqiNQKVYPLHRLDKATSGLLLFALDSNTARLMGQQFEEHTIQKHYLAICRG-WTAEHGEIDHALKHKLDKLGdRHAQTNKPPQEALTNFERLattdvmhkigKFDSQRYSLVKLMPKTGRKHQLRRHLNHISHPIIGDVKYGDRHHNHFFntwlgqHRLYLAATSLTFNHPQTNARMTLNAPLE-
>UniRef50_A4BJ00(4-226:249) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ00_9GAMM  E=4e-42 s/c=0.78 id=34% cov=91%
-------------LNIVYEDDVLLVVDKPSGLLMHPSWLDRReTDTLAGRAKAYLAQQsegakvHTVHRLDRPTSGLVVMCKDDHAAKALVEQFQEKTVNKRYWAICRG-FAPVAETLDYPLIEEHDRIAdKFADSDKPAQEAITEFRRLgitelaipvsRYPKMRLSWMECVPVTGRKHQIRRHLKHLRYPILGDTRHGCRHLNRAVEGsfgelfMGLRAVEMSFQHPVTNELMTF------
>UniRef50_D1QMM7(325-522:522) Pseudouridine synthase n=1 Tax=Prevotella oris F0302 RepID=D1QMM7_9BACT  E=2e-41 s/c=0.86 id=44% cov=89%
----------------IYEDKDIVVVCKPAGMLSVPGKsLRENVRSLVRQRHPEATGPMIVHRLDMATSGLLVVALNLKSYIDLQRQFEEHSVQKRYVAlLSRPHHGARSGQISLPLRPDLYDRPRQIVDAVHGRKAVTNY---QQTGEN--RMNLYPLTGRTHQLRMHCAHadgLNNPIKGDELYGTRDE-----RLYLHAEELSFVHPGTGKRMHFECHADF
>UniRef50_Q2W0L6(3-213:229) Pseudouridine synthase n=4 Tax=Alphaproteobacteria RepID=Q2W0L6_MAGSA  E=2e-40 s/c=0.79 id=28% cov=95%
--------PDEILSRVLYKDQDVIVLDKPAGLAVHAGPNsPDHLELYLGALAFGWAEMpKLAHRLDRDTSGCLILGRHAKAIKRLGKMFEHRRVEKVYWSVSHGSPAADSGTVDAPLLKVSARGQGWRIkVDPAGQPSITDWSVLGR-SDGLSWIEWRPRTGRTHQIRIHAQYLGCPLLGDAYYGPDPEPKV--RLHLLARAVAFPALApSKDPVRVTAPPP-
>UniRef50_C5NYJ1(52-250:251) Pseudouridine synthase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYJ1_9BACL  E=4e-40 s/c=0.83 id=30% cov=90%
-----------------YEDDYILVVSKPFGIKTHPNDIETENDTLVNYLIADYSYLEPIHRLDIDTCGLVILAKTPLIKAKLDQMLEQRAIKRYYTALIKNNIKPQ--TINTNIGRDSKEKNKMAVTR-NGKNAITNILECSKLDQNRFSVLISLETGRTHQIRVHLASIGVSIIGDKLYSKDGYKY--DKMYLGALKVNFQHPVTGNTLEIKSsiEKDF
>UniRef50_UPI0001AEC02F(40-261:279) pseudouridylate synthase, 23S RNA-specific n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC02F  E=2e-39 s/c=0.74 id=32% cov=93%
------------HLPVLYQDEHIIAIEKPPGLLVHRSPIDRHETVFAVQTLRDqiGQHVYPAHRLDRPTSGVLVFSFSSEIAAKLGQQMMDKQVVKTYHAIVRG-FVHHTGYIDYALkYRYDKIADKHKRPQQPPQPASTMYQsvakfevpepVGKYQSARYSLVKLSPSTGRKHQLRRHMVHIRHPIIGDTTHGDGKQNKFAKQhfnfnnLALSCTQMGFSHPVTGKWVSINS----
>UniRef50_C9LQW6(70-266:305) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQW6_9FIRM  E=9e-39 s/c=0.82 id=33% cov=86%
-------------FTIVYEDEHILIADKKAGLLCMDSTGKTTRTLigeVNEYLAdKGEPSAYMVHRIDFNTSGLMVIAKDEESKGILDRMIKERELEKVYLCIVSGVPKKKEGHLIHYLFKDSKQGKVFlsDVPQKGAKSAVTDYHIVKT-GQNLSLLECTLLTGRTHQIRSQMAYIGHPLIGDDKYGSKEVNRryGEKGQLLHAWKITF-----------------
>UniRef50_C6AMS1(1-198:238) Pseudouridine synthase n=19 Tax=Proteobacteria RepID=C6AMS1_AGGAN   E=1e-38 s/c=0.81 id=32% cov=90%
-------------FQIVFQHPDFIVINKPNGISVHKDHADVGLTRLVAQ-QLGVPQVWLVHRLDKVTSGLLILALNEKAAVTLSRKFAEHQIQKIYLALSTQKPKKKQGRISGDMQK--ARRGAWKLCQSKENPAITDF-VSHSLAPNLRLFILYPKTGKTHQIRVAMKSLGSPILGDELYGGE----VADRTYLHAYQLSFD--YFGEAVQISTSPEF
>UniRef50_D2QLU1(3-222:248) Pseudouridine synthase n=53 Tax=Bacteroidetes RepID=D2QLU1_9SPHI   E=1e-38 s/c=0.73 id=32% cov=88%
------------PFQVVYEDNHLLIVNKDPGILVQGDRTGDITllDVLKDYIKEKYNKPgevflGLVHRLDRPVSGLVVFARTSKALERMNEIFRKRQVQKTYWAVVRRKPPKDSDKLVNWLIKDEQKNQVTVYDYEvpKSQKAELSYRVLGKINEHY-LLEVNPITGRPHQIRSQLAHMGCPIRGDIKYGYDRAVAD-KKIYLHARRLYFIHPI-------------
>UniRef50_A5E2D2(188-360:622) DRAP deaminase n=4 Tax=Saccharomycetaceae RepID=A5E2D2_LODEL   E=2e-38 s/c=0.93 id=32% cov=79%
-------------IKIVYQDDDLLVIDKPSGIPAHPSGRYRYNSVTKILQHEMGIVLHPCNRLDRLTSGLMFLGKTAKGSTKLMTQIKDRNVSKEYIARVKGKFPKESITVDQPLLTLNPRLTLNVVDFVKGKEASTEFKRISYDPKtNTSVIKCHPLTGRTHQIRVHLQYIGYPIANDPIYSNG-----------------------------------
>UniRef50_B6IR13(7-197:242) Pseudouridine synthase n=1 Tax=Rhodospirillum centenum SW RepID=B6IR13_RHOCS  E=2e-38 s/c=0.84 id=32% cov=87%
----------EIRARVLHRDADVLILDKPHGLPVHyGTKTVEHLEQYLPWIAFEREEpPRLAHRLDKDTSGCLVLARDAEVAARLGRLFLHGHVGKTYWAVVLGRPRGDAGRIDLPLLKVHIPGCSKVVVDPDGKPALTDWRLLATDG-RLSWLELTPRTGRMHQLRAHCACSGFPILGDPIYGAEQPPPV--PLHLHARTVSF-----------------
>UniRef50_A9GHW4(113-337:356) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHW4_SORC5  E=1e-37 s/c=0.70 id=35% cov=92%
---------------VVYADASVVVVNKPAGVSTIPygdeapaeqaATLDALVREVLARrdRLRGRAPLGVVQRLDKGTSGLLVFARTLAAKKHLAQQLRVRAMHRQYLALAHGAVP--RGTYRSYLVEDRGDglRGSARDGRREGQLAVTHVEPIEVlrgpqegaGAGGVTLVACRLETGRTHQIRIHLAEAGHPLVGETVYvrDYRGTKVPAARLMLHAAELGFDHPADDRPMRFQAPPP-
>UniRef50_D1AMK0(87-270:285) Pseudouridine synthase, RluA family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMK0_SEBTE  E=5e-37 s/c=0.85 id=26% cov=84%
--------------MVFFEDDDCLIINKPGGVAVHKGTGNQYGLAEVYKSIYKNENLNFANRIDKETKGLLLGAKNLKFLRYLTEKIRNNELEKRYIAVVSGIITEDEFTIDNFL--ETKENKVVVSDKENGKAAKAVFKKIKTIKNKYTVLEVELITGRKHQIRVQLADMGFPIAGDKKYGSRNTRGE---LMLLAYYLKFD----------------
>UniRef50_A9B0U7(57-286:312) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0U7_HERA2  E=5e-37 s/c=0.68 id=28% cov=97%
-----YANPVVTPADILFEDEWILVLNKPAAWYSVATPWDTFGHLEGALQRFFLERdgeavpFHLVHRLDHGTSGALIVSKNPSLNSRFQRMFNEGRVQKTYLALCSGLPDWTKLEVVTGHSRGEFGLWSvypaamidqlYGPKDRRVRRAHTSFTVQAV-GNAAALLAARLHTGRTHQIRLHAKHIGHPLVGDQRYGGvtQFGNLSIPDQLLHAAWLQFPHPRYGSMLELIAPVP-
>UniRef50_C4ZBX3(5-244:244) Probable 23S rRNA pseudouridine synthase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZBX3_EUBR3  E=6e-37 s/c=0.65 id=28% cov=93%
--------------DIIYEDNDIIICYKPAGIATQTRRIGQQDMESFIRnyraAKNEPPYVGIVHRLDQPVEGVMVFAKNQKAAASLSRQIKEHTTEKYYRAASRgqgvsgadkeeDNHDSAWHTLTDYISFDKRTNTSKITSEKDrlAKKAVLQYRVISVTPDRdssqneciRTEFDIKLLTGRHHQIRLQLAHIGYPLIGDTKYGKPASNNSGtgsksgrtcggvrEQLALCSYKIVFDHPATGERMTFELP---
>UniRef50_Q2Q0E2(75-281:294) Putative RNA pseudouridylate synthase n=1 Tax=uncultured organism HF10_3D09 RepID=Q2Q0E2_9ZZZZ  E=6e-37 s/c=0.75 id=32% cov=92%
---------ETHSLDIIFEDDAILVVEKPAGLLSVATDRLE-VDTLHNRCVEYCrelkkkAWCFIVHRLDKATSGLMVFAKTEDVKRDLQEQFAERLVHRHYVAL-VEGVAEPGQAIQHLVEDRNLRVFVSDKKTKTSKHAITTWDILE-KGDESTLLSVVIETGRRHQIRVAMAENGTPVMGDTMHGA--TTNLHGRICLHAVALEFLHPLTDDPIRFES----
>UniRef50_A1WTN6(7-226:249) Pseudouridine synthase n=2 Tax=Ectothiorhodospiraceae RepID=A1WTN6_HALHL  E=2e-36 s/c=0.70 id=37% cov=93%
---------DDRSLAILYRDERLIAVYKPAGLLVHRSNIDRDRDVVLQRLRDQLGghWVYPVHRLDRATAGVLVFGLDPDAASVLAAAFREQRIGKRYQAVVR-------GWVEAPGRIDRPLGAGRRGEGGAPQPAVTDYvplawtelpiPVSRYDTARFTRLALHPQTGRQHQLRRHMKAISHPILGDTTHGDGannrffREHFGARRLLLVATELVVPHPADGGAVRLATEPD-
>UniRef50_A1ZQW5(72-277:297) Pseudouridine synthase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQW5_9SPHI  E=2e-36 s/c=0.75 id=35% cov=88%
-------PPKqyEFTLEVVYEDDHFAVINKPAGVKVSGNQYRTIVNMLPGNLKASplpdaLKWAKPVHRLDVPTSGLLMVAKTTQAHIHLGQQLEQKTIKKAYHAIVKGTPAA-RGHIRTPI---------------NGQSAHSEFEVLQTvpslRNETLSLVRLSPHTGRTHQLRVHLASLGHPITGDTTYDEAGNTMLHKGLFLAATSLQLQHPTLTQTIEVS-----
>UniRef50_UPI000050FD43(95-324:332) ribosomal pseudouridine synthase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FD43  E=4e-36 s/c=0.67 id=31% cov=91%
-------------ISVVFEDDDLLVVDKPHFLASTPnGRFVRECVVTRARLDFDQPDLVAIHRLDRVTAGLLILSKRPETRGRYQRLFQDRLVTKTYRALAAMPPAD----LELPLVKEsrlvKPRGGRQVLEVEGEPNAFSKISLLgertppsPRWSDATeppprrsvgecpsiGEYQLEPLTGKTHQLRVHMNSLGLPILGDPVYPvdrAPDPYDFSSPLQLLAASIGFDDPLTGRPRRFES----
>UniRef50_B4RU15(3-235:279) tRNA pseudouridine synthase A n=2 Tax=Alteromonas macleodii RepID=B4RU15_ALTMD  E=5e-36 s/c=0.66 id=30% cov=90%
------------PIPILFEDANLLVVNKPVGVAMHDALDSKSGdpkdnalaiehedtdknaaqkessackgedtlrtDGIVTQLKKQlsLSELHLCHRLDTGTSGCLCLAKNAKTAAEIGELFSSRRIGKFYLALSEHKPKKKQGAIIGDMKNRRGGQRILLKSQEN--PAITQFFSHA-AKPGTRGFIVKPHSGKTHQIRVALKSIGAPILGDSLYGG----APSDRLYLHAWHLRL--PLSAGELTITAPFD-
>UniRef50_B9DIP6(64-275:294) Pseudouridine synthase n=61 Tax=Staphylococcus RepID=B9DIP6_STACT   E=5e-36 s/c=0.72 id=25% cov=93%
-ASENLV-PDYQPIDVLFEDQYFIAVSKGKKQNCAPSREHPHG-SLIEQVIGYLKDQaadgnyqsipHIVTRLDRDTSGIVLFAKHGHLHHR----MSSTEMKKVYHCICNGKL-ENTSKIVAPIMRAGDSIIERKVDQA-GKYAATSYQPI-NASEQYTLCEVRLHTGRTHQIRVHFQYINHPIVGDGLYGG--LHTFVTGQALACCYLSFKHPITHEQIELR-----
>UniRef50_A8BWX6(2-217:250) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Giardia intestinalis RepID=A8BWX6_GIALA  E=6e-36 s/c=0.70 id=32% cov=91%
--------------SVVFENDDYTVINKPPNLHI---DGDYPQTVRSWYLATRGRAPRFVNQLDYPTSGLMVIASSRKAAGFAGREFQARAVAKTYVALVVGDVASQ--TISAPIADDAADpRQFCMCISETGKHSETHVERIAAIPEDlrelspslpqglYTLVVLRPVTGRRHQLRLHLAHIGHPIVGDQLYGGGLTDTNQcgeeERLCLHALMLSIPN-LSGLPL-LEAPLEF
>UniRef50_A4XK98(66-269:311) Pseudouridine synthase n=2 Tax=Clostridia RepID=A4XK98_CALS8   E=9e-36 s/c=0.75 id=28% cov=84%
----------------VYEDDNIIVIDKPYGIPSHPDTNNEY--SVVNWIEDNYsgnQLPALCHRLDRNTSGLMIIAKNRQVLNEMLKYMSRRAIKKKYLCITKKVDLPKSGVLVHYLKKDSKKSKVYISDLpaEGYSEIVTRYKII-RGKDDLLLVDVEIETGKTHQIRSQLAHVGLCILGDSKYGDWALNKKYNAsiQCLCAYYLKFD----------------
>UniRef50_Q09709(96-276:394) Uncharacterized protein C18B11.02c n=1 Tax=Schizosaccharomyces pombe RepID=YA32_SCHPO  E=1e-35 s/c=0.83 id=31% cov=80%
-------PPVsDQPVGIVHEDESYVVIDKPAGVPVHPTGRYNH-NTVLHILMKENKCSllYPCNRLDRLTSGLMFFSKSPKAAEEMRVHMISKSLKKEYVARVIGEFPNSGEVIcDAPLLTVAPTLGLNRI-HPDGKEASTVFKRIAFDG-HTSLVLCKPLTGRTHQLRVHLQYLGYPIANDPIYANKR----------------------------------
>UniRef50_A7ZDY2(54-236:252) Pseudouridine synthase n=4 Tax=Epsilonproteobacteria RepID=A7ZDY2_CAMC1  E=2e-35 s/c=0.83 id=28% cov=84%
---------EMPKPSVIFEDENLIAINKPAAITS--------------EKISQIYKFPLLHRLDKDTSGVLLLVKNDEFASLAINEFKKMKVEKIYVAAVRGIMSEEV-VVNEPILTIKNKNGAFSKISKDGKEAISEISPLMVVGKK-TLVKVVIKTGRTHQIRVHLASLNLPIVGDEKYGKNRAN----RMFLHAYSIALLD------YKFKAPIP-
>UniRef50_B6HIT3(109-321:526) Pc21g01540 protein n=3 Tax=Trichocomaceae RepID=B6HIT3_PENCW   E=3e-35 s/c=0.70 id=30% cov=77%
---------------IIYEDDDLMVIDKPAGVPVH-AAGRYNFNTVIQILRSERGSewlPRPCNRLDRLTSGIMFIGKHAKGADKMAAALKARSVQKEYVARVKGKFPDGVVVCDQPIMQVSPKLGLNRV-RATGKEATTKFRRLAYYPpesaketesssdderpatppasfanetEGYSIVHCLPLTGRTHQIRVHLQFLGHPISNDPIYSNRR----------------------------------
>UniRef50_A9KM78(2-208:237) Pseudouridine synthase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM78_CLOPH  E=1e-34 s/c=0.71 id=31% cov=90%
---------------ILFEDKHIIVCIKPIGVLSQPGQGEGmDMITLLQEYRKNNKEsdyIGLVHRLDRNVGGVMVFAKTELATKKLSVAIRERNFTKEYMAVIHGRPSESSGILKDLMFKDSSKNKSFVVNrmRKGVKEASLEYRTIETievAKGEFSFIRVKLHTGRTHQIRVQFASRKLPLVGDGKYGGKDNQCDA---ALWSYRLAFVHPLTKALVDIK-----
>UniRef50_Q04TZ1(74-376:377) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04TZ1_LEPBJ   E=1e-34 s/c=0.49 id=28% cov=97%
-------PPVRKDYKILYEDEFFVAVDKPGDLPVHPAGKYRKGNLLtLLKESGKFENLFTVHRLDRETSGVVLFAKDSKAASLLSGLFSSRKIQKYYITkvygdfprrkiaygvlkpdvssiirkkrkffllksnflkrnkkyflensfspeeefcltafrkIESYFIKTQFQEIESDVGELKVRSRKKKLNFEslqtqNEKNEEPKVRSIYPKHEFYSFVLCKPITGRMHQIRAVLYGLDFPIWGDKLYGKDEevflefiegknpdltERLGMERQALHAYAIRFNHPITNRKMKIVAsvPKDF
>UniRef50_A9UX27(100-289:401) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX27_MONBE   E=3e-34 s/c=0.77 id=29% cov=77%
------------PLSIVGETPDLLAIDKPASIPVHPcGRYRHNTVQAILGHEHDRWRVYPCHRLDRLTSGLLIFCKNPAMAKQFEQWITQHQVEKQYICRVQGRVEQSVLFCDAPL-KICDQRLGLCCVHPEGKASLTRFRVIRRDKD-TTVLHCFPKTGRMHQIRVHVQYLGHPIVNDPVY--------------------------------------
>UniRef50_Q30NR3(77-294:304) Pseudouridine synthase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30NR3_SULDN  E=4e-34 s/c=0.67 id=35% cov=89%
--------------------ERFVVFDKPSGMLIHP-QNRFTEYSLIDELKAQFGMNAnIAHRIDQETSGLVLCAKDKKSEVDIKMMFQERDMKKKYLAMVHGELKEEL-RIDAPLLRydDEKSALVRMVvkVDPTGKESLTFVRPLKYFPiTDTTLVECSPHTGRQHQIRVHMFHMKHPIVGDPVYGQSEEsvvryldrkierdervkLSGAKRLLLHANELEFE--LYGKKHIIKSSVNF
>UniRef50_B0SG87(59-289:320) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SG87_LEPBA  E=6e-34 s/c=0.63 id=32% cov=90%
--VIEYNPipgrikePEvDTNYSILKETEDFLFVEKPGNLPMHPA-GRYRTKTLLSFLETKYPKIIPVHRLDRETSGIVIFAKSEESRKWLQKKFETRVVYKEYFAIVLGKFTKEQKL-DGFIGRDIHSVIRKKmifspVEFPDSKSCATHFVPILYNEDkKISLVLVKPITGRIHQIRASLLYLGFPIIGDKMYGLREsifldfvnfgmtdslkEELGFERQLLHAYSIR------------------
>UniRef50_UPI0001BCD7D0(54-264:283) hypothetical protein AmarD1_17996 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD7D0  E=8e-34 s/c=0.69 id=29% cov=92%
-------------LTVLHRDERLVVVDKPAFLSTIP-RGRHVAQSVVVRLRDelGLPELSPVHRLDRVTSGVLVLTTERRWRGAYQGMFQHRRVHKAYRALAPLRPDLELPLTVRNHLRKDRGAWQVTVDPDAQPNAETLVELDAVVG-GLGVYRLTPRTGRTHQLRAHLCGLGIPIVGDPLYPAvleVDVDDFSTPLQLLAHEVSFTDPVDGGERRFTS----
>UniRef50_D1N1K3(81-313:321) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K3_9BACT  E=8e-34 s/c=0.62 id=28% cov=92%
---------------IAYEDDALLVVDKPGNLCVHPS-GPFFKHTLWHLLSSKYGKIHLVNRLDRETSGLLVAAKNPKAAAKLGKP--GWPMRKEYLALVFGNFADRieaygFLVPDLASVVRKKRRFVAGERPPEGAVRPESARTVllpARSGERYSLVRALPETGRLHQIRATLFSLGFPLLGDKLYGPDDgiflkirsnaitaadrERLILLRQALHSAKLAFRHPDTGETVAVESPLP-
>UniRef50_C4G2Q7(4-224:236) Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2Q7_ABIDE  E=1e-33 s/c=0.66 id=30% cov=91%
-------------IPILYEDEDIIVCVKPVGILSQ-GDKDGNKDLVRELKKHlvisarknkqsigKEPYIAVVHRLDRNVRGIMVYAKTGRAAAGLSKQIAENKLTKRYMAVVSFTPERCTPEINvekkriDYIAADKVKNISTIAEKEskGAERAELNYKVIKTAGNK-ALVQVDLITGRHHQIRLQLSQIFNGIVGDTKYNDDyKLTDGWKDPALEAVELSFVHPVSGEKLSF------
>UniRef50_D1SY25(110-317:328) Pseudouridine synthase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY25_9BURK  E=1e-33 s/c=0.70 id=32% cov=91%
---------------VLYQDEHLVVADKPHFLPVVPtGRYLQHTLLVRLKRRLGLDGLSPVHRIDRDTAGLVLFSVQRATRGRYQALFRDRAVDKTYEAVAPWRVDVAFPRERSSRIEESPQFFRMHEV-PGEANSLTRMEVLDVDG-AWARYRLSPVTGRRHQLRVHMAALGLPLRGDAFYpevNDPPEGDFSRPLQLLARAIAFTDPVTGRERRFES----
>UniRef50_C3PFH5(62-267:268) Pseudouridine synthase n=5 Tax=Corynebacterium RepID=C3PFH5_CORA7   E=1e-33 s/c=0.70 id=30% cov=91%
------VPSEEPILfdyRVVFEDGDLIVADKPHFLPTT-SNGRIVRETLQTRLRVDLNEDSIVplHRLDRLTSGLVLCSRNPRTRAAYQQLFQKRVVVKHYRA-QVAAPFSFDGTVRLGMRRVRGER--QVRVDSTGTPTVTRVRASGTTAD------VWPLTGHTHQIRVVLNHLGHPIVGDDTYPVDRGLDLYDfstPLLLSHVALSFSDPVTGRKREFQ-----
>UniRef50_B7CDE6(82-278:295) Pseudouridine synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDE6_9FIRM  E=1e-33 s/c=0.74 id=27% cov=84%
-------------LDVIYEDENILIVNKPYGLLSQ-SDQSQNQDCLVNRVQAYLMEkneydpnkehsfaPSICHRLDRNTTGLVIAAKNANALRKVNEAIANRTIQKMYRAHVVGTFEQKDFTMCYYIRKENTIAKVSDKKLEGYQKALMDVHVERDDGEN-SICTITLHTGRFHQIRALMGHIQHPLLGDVKYGYHGKKRPIE---LMAYRLEF-----------------
>UniRef50_D2VTC2(412-619:624) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VTC2_NAEGR   E=1e-33 s/c=0.70 id=33% cov=86%
---------------ILFKNDEIIALNKPYGICVQGGSNQTfHIDALLDALTGLDGfnvRPKLVHRLDRDTTGVLIVARNRAGAIRMQQWLQESTVplKKCYWAVTVGVPTPTTGRIKMVIDIQKDANGVEKVVPvdnktDSSKISVSEYKTIDHMTDKLAWVALYPVTGRKHQLRVHCAsALGAPILGDYKYGEGVPESLthvvpdksLKRLHLHHRAMKLP----------------
>UniRef50_C5TJ50(96-303:307) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=C5TJ50_NEIFL   E=1e-33 s/c=0.70 id=29% cov=91%
--------------KILHIDEHLIVVDKPHFLPVIPS-GRFLRETLLTRLRLRSELQHlnveditPIHRLDKDTAGVMLLSLNPATRRDYQTMFQEKTVQKTYEAVAPTRTDLDYPL-DLSSRMERGEKFFLTRETEGEPNAHTTIELIENRG-AFSLYRLTPHTGKKHQLRVHMMSLNMPLMNDALYPNPlaaGDEDYDRPLKLLAKRIEFTDPVSGEIRVFES----
>UniRef50_A1SUH8(16-211:242) Pseudouridine synthase n=3 Tax=Alteromonadales RepID=A1SUH8_PSYIN   E=3e-33 s/c=0.73 id=27% cov=89%
-------------FSVVHENNEFIVINKQAGINFHSEDGEFG--VVVAAEKAFSCKLYSVHRLDKMTSGLLLLAKSSPSAAQLSALFFEHQIQKYYLAISDKKPKKKQGLIKGGMEKSR--RSMWKLTKQTNNLAITQFFSYSLENGKR-LFVIKPRTGKTHQIRVALNSIGSAICGDPLYAEKSPQSAAfDRAYLHAYQIDFK--LNNQDYHFKA----
>UniRef50_Q4RM58(165-346:516) Chromosome 10 SCAF15019, whole genome shotgun sequence. (Fragment) n=5 Tax=Euteleostomi RepID=Q4RM58_TETNG  E=5e-33 s/c=0.79 id=33% cov=80%
-------PPVVGkPLEVLVDDGEVLVVDKPASIPVHPcGRFRHNTVIFILGKELGISELHTVHRLDRLTSGVLLFARTLETSKKLDQLVRDRKLEKEYVCRVEGEFPEEEVICEQPILVVSFKVGLCRVD-PKGKECRTVFQRLSFNGK-TSVVRCLPVTGRTHQIRVHLQYLGFPILNDPIYGS------------------------------------
>UniRef50_Q7MA82(65-292:308) Pseudouridine synthase n=1 Tax=Wolinella succinogenes RepID=Q7MA82_WOLSU  E=5e-33 s/c=0.63 id=33% cov=95%
--------PDSRGLEPLFIAPFFALFDKPADLLVHPKGTFEHYSLMDEVRLRFGQEADLAHRIDKETSGIVLITRSKKEGAILKINFFNREVKKCYWALVRGKM-EGERILDFPLKAqsKRLDLGVRMRVDEKGKSSLTQIKALDYEAlSDTTLVEASPLTGRTHQIRLHLAHAGYPILGDPLYGTsdelsrayleqamdqeeRRRCFGASRLMLHAQGLGF--PYKGSWYEIVSGQDF
>UniRef50_C5ZYE3(67-313:319) Pseudouridine synthase n=3 Tax=Helicobacter RepID=C5ZYE3_9HELI   E=6e-33 s/c=0.58 id=30% cov=88%
--------PNSIGLKPIYENEDFALFNKPAQMLIHP-KGRFFHHSLMDEVREYFGtEASLIHRIDKETSGLVLVGKHKRSIVELGELFANNRIKKKYLALIKGKMCKTSKIVGDFCLLMPLSLQEKGGDLSvrsvflgqnlrkdskllGFRDAKSEFEILGEFGGN-TLLKVYPITGRTHQIRVHLFSLGFPILGDPLYGcedwqsreyldsefieenrdfglcaeKRKEYFGADRLMLHAYSLEF-----------------
>UniRef50_Q7NAY8(81-292:330) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAY8_MYCGA  E=9e-33 s/c=0.67 id=26% cov=89%
----------KPELDLIYEDENLVIFEKPLGIPAQQTDEPSQYDHMQNRLVHYLVKsnqydylnnqaylPSIVNRLDTYTTGIMLGAKNLKAQQALNQIIKNRDLKKFYHCLVHGEINPKKATLTAYLTKDPNRSLvsIQKEKTNDNKIIITRYQTLYYFKKqNYTLLDVELITGRTHQIRAHLASINHPVVGDYKYAKKQyqnNQGNFKHQLLHSYKIIFD----------------
>UniRef50_A6DMG7(10-219:246) tRNA pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG7_9BACT  E=9e-33 s/c=0.68 id=28% cov=92%
----------------LYEDEYLVVAKKLAKISVHRSEMCRDRRTLLTMVRNKLGGQYVyaVHRLDRPVSGPLLFAKSPEMCRELQKQFNEKTVEKKYIALVRG-WLEGKGKVDKQLLKKSNGTIQDCLTRYRGlATAEIDEPLGKFPTVRYGLVELEPVTGRYHQLRRHMRDLAYPIIGDSTDGDSHQNRFfrekfeLRRLMLHCFYLSFKHPVSQELIKIYLEPD-
>UniRef50_A6QCU7(73-291:309) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QCU7_SULNB  E=1e-32 s/c=0.64 id=34% cov=91%
----------------LFSNRDFMIFEKPSGVLVHPNTMS-TPYSMLDEIRHISGDNANAtHRIDMETSGLLLASKHKKAETHLKNSFEAKTIKKSYLAWVDGRLNEPFSVSEKIKINNDYSRVKHKVFISDaGKASHTDFIPLRYNERlDATLVACYPQTGRTHQIRVHLFHVKHPILGDPIYGTtfdtanryledeiseeeRFLETGARRLMLHAHTLSFT---YGNRFHIKSKSDF
>UniRef50_Q7XA65(76-317:322) RNA pseudourine synthase 1 n=12 Tax=Magnoliophyta RepID=PUS1_ARATH   E=3e-32 s/c=0.58 id=29% cov=92%
--------------DILYEDEYLMAVNKPKGVYC-----EAVLRSAPQIVLDSSSEYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIgSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGrvlpggsfvRDMETTFEVVSVNSVKNESCELEdvnhvivaegerelscggddddvvvvvrafPRSGRTHQIRLHCQYLGIPIRGDVKYHGVYEwnGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPY
>UniRef50_D1B8F2(82-285:302) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8F2_THEAS  E=3e-32 s/c=0.69 id=35% cov=88%
---------------VIHWDRRLLVANKPAGWICQPGGGRGTSlPEEVWRLLGVDRGPVPSHRLDVNTTGVVLVPLDGALGRELHRLFREGTIRKLYWALVRGTCV-GEALVDLPLSKDGRGN---VTPSPSGQPARSVVRPLAVRG-GFSLVEVELLTGRQHQARVHLAHLGLPILGDVRYGVR--FRGVGRTMLHARRVLLP---FGESLgdlagaAFEAPL--
>UniRef50_C0QI10(68-289:298) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI10_DESAH  E=3e-32 s/c=0.63 id=27% cov=91%
--------------EILFHNDHLIAACKPHFLPVVPS-GPHVNETLLNRLKIRFsnPDIVPIHRLDRETAGVVLFSVEPETRGAFQHLFMEKKVKKTYEAVTRRPgtLPHLPSVIVNRIERGEPWFRNTIV--PGRPNAETRLELVGADRDR-AFFRLYPQTGKKHQLRLHLASLGFPIENDRCYPDllpKQGDDWEHPLMLLSREVRFMDPIAGRERVFTSP---
>UniRef50_B1C9B9(81-274:307) Pseudouridine synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9B9_9FIRM  E=3e-32 s/c=0.72 id=24% cov=86%
-------------LNIIYEDKNIILIDKPSGILSQ-ADGSSKEDIVSNLISYlNSKSTGIVTRLDLNTSGIVLAGKNRRALMLLNEMSKNKLIDKRYLTLVRGDFDREGKVTHYGIKDNKENKLILGNKKVDGSFEVSAEFIIKKRYKYHTLLEVRLITGKTHQIRSQLDKMGFPVVGDRKYNkskqcGNKDDFKINRQFLHCYKLTL-----------------
>UniRef50_C6C294(79-264:292) Pseudouridine synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C294_DESAD  E=5e-32 s/c=0.75 id=32% cov=83%
-----------PELPIIYEDDNYLAVCKPAGLPTQGGTG--HDDSVADRLLSMFADAHykpaPAHRLDRDTSGVILAGKSHQGQKDLSDFFAEHgEGGKFYLAEVEGRWPEEDWVELHDKMEKSGSKGREKVVVGSGKDASSSVCPV-TIGEKSSLLIVKLHTGRTHQIRVQLSSRGFPIAGDVKYGGQNGK-----MKLHCLRI-------------------
>UniRef50_B4D302(75-282:289) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D302_9BACT  E=6e-32 s/c=0.67 id=30% cov=92%
-------------IRICFEDAALLVIDKPPDLLTIASEAEQEKTVYFQLTeylrgndVHSRERVWIVHRLDRETSGIMVFAKTPQAKGLLQTGWDK--AEKRYQAVIEGSLPNDKGTFRSYLDETDPFRVISVPRTPTTRHAVTHYRVLKR-GKGRTLVELTLETGRRHQIRVHLADAGCPIVGDKKYGAKTN--PAKRLGLHSWSLLLLHPISGEEHRFESELP-
>UniRef50_Q9LT72(185-385:477) RNA pseudourine synthase 4, mitochondrial n=2 Tax=rosids RepID=PUS4_ARATH  E=9e-32 s/c=0.69 id=36% cov=77%
---------------VLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKsesPRLVHRLDRDCSGLLVLARTQTAATVLHSIFREKTtgasaygvkknvksLKRKYMALVIGCPPRQRGQISAPLRKVVVDDGKseRITVNDNGelvstQHAITEYRVIESSPHGYTWLELRPLTGRKHQLRVHCAEvLGTPIVGDYKYG-------------------------------------
>UniRef50_Q6A5E7(71-287:295) Pseudouridine synthase n=4 Tax=Actinomycetales RepID=Q6A5E7_PROAC   E=4e-31 s/c=0.63 id=31% cov=90%
---------------ILYSDERILVVDKPHFLSSIP-RGRHVLESVVVRLRTqlGLPELTVAHRLDRVTAGVLLLTRERKWRRPYQEIFERREVVKKYrlVAPVVHDPAgegvtatKSGWQVRSRIIKERGILQAREV--PGVPNAVTDIALIGEHG-GWGLYEASPRTGRTHQIRLHMQRLGAPIVNDPFYPvvlDTPVDDFTHPLQLQAWRMGFTDPVTGDPRAFTS----
>UniRef50_A8EQU7(71-280:300) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=A8EQU7_ARCB4   E=1e-30 s/c=0.64 id=32% cov=86%
-------------LKPLLEFEDFAIFDKPTNLMVHPISKN-TSYSLLDEIRYHFGENAnLIHRIDAETSGLVIVGKNKKSEIELKDMFQEKKYHKSYLAIVQGEIKEELK-INKALDREGKaigVRMKVCTQEEGGKESITIIKPIIYDKEkNLTLVEALPLTGRQHQIRVHLHSMGHTILGDPIYGVDDENAenylnktlseedrfkvtKSYRLWLHANYLEFN----------------
>UniRef50_A1WL43(98-304:314) Pseudouridine synthase n=12 Tax=Proteobacteria RepID=A1WL43_VEREI   E=2e-30 s/c=0.65 id=32% cov=93%
--------PFAPTL--LHQDPHLVVADKPHFMPVTPsGRYLQHTLLVRLKRQLGLPQLSPVHRIDRDTAGLVLLSVQQCTRGAYQALFRERRITKHYEAI--APWRADVVFPRDHTSRIEPGPQFFRMQEVPGPPnSHTHMQLLAVAGD-WAHYRLSPSTGKRHQLRVHMAALGLPLRNDPFYPvvdDPPPGDYSRPLQLLARALEFVDPLSGERRVFES----
>UniRef50_C3XCW5(84-305:319) Pseudouridine synthase n=2 Tax=Oxalobacter formigenes RepID=C3XCW5_OXAFO  E=2e-30 s/c=0.60 id=27% cov=95%
-----YLPnerPNPFQETVLYQDDWLVVADKPHFLPVTPS-GKYVSETLLVRLRKKLGIDtlTPIHRIDRETAGLVLFSVKPEGRNLYQRLFRENFVSKHYEAIAPYRDDIAFPMRYRSRIEEGDSFMRMRVIPDGTPNAETEIS-IQQKSNAFAHYHLKPVTGRKHQLRIQMCSLGIPLLNDRIYPvhlpeavtdEMQAEEFRYPLQLVAKSVSFKDPVSEKIHHFES----
>UniRef50_A4S4W6(1-178:178) Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S4W6_OSTLU  E=3e-30 s/c=0.75 id=33% cov=79%
---------------VLYENDAVVIVNKPPGVSFH----SEFEPGALARLRasrdAREERLRAVHRLDKGTSGTLVFAKTADAAKKLSDGFATRAIVKYYVGISGKKPKKKMGTVTGDMARARRKAYKLTNTKDN--PAVTKF--VSFGAKGRRMFIFRPLTGKTHQLRVCAKSLGAPLLGDDVYSG----AVAERCYLHACAI-------------------
>UniRef50_B0D7R4(31-257:321) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7R4_LACBS  E=8e-30 s/c=0.58 id=29% cov=92%
----------------LYVDPAVAVVTKPHGLVCQlihrqlPAGRVNHFNVMMQDLKAHLSletFPYPVHRLDKSTTGAFLLALTESSARQLSQQFQKRTVQKTYLALVRggeKSFPEKFGEIRTTLNKVDGYPEVD--LSSQGQPCATDWKLLASSPiAPISLLELNLLTGYKHQLRVHLAKCLHaPILGDAQYSKKPlssaitdvVKIPEDRIFLHASEISFLKykssgPHKQFRLAVRAPLP-
>UniRef50_B0E0Y2(86-276:478) Predicted protein n=2 Tax=Agaricales RepID=B0E0Y2_LACBS   E=9e-30 s/c=0.69 id=32% cov=77%
------------PVKVLYHDveREFLVVDKPGSIPVH-ASGRYYRNTLIEILVNDfgYKKCYPANRLDRLTSGLMIIPLSPDRARVLTDEFTTGTVRKEYVARVRGRFPAQEIVCEEPLLTVDRQMGLNIVHPEGKvlfihlQPAKTVFNLIRYDENtNSSVVRCEPLTGRSHQLRVHLQYLGFPIANDPIY--------------------------------------
>UniRef50_C2KWN7(91-316:340) Pseudouridine synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWN7_9FIRM  E=1e-29 s/c=0.58 id=28% cov=92%
---------------ILYEDKHCILFNKPVGLLSeNDGSSSFSVNSLLLsymrtkgelsKEQEKSFRPGIANRLDRNTSGIIIFGKSLGGLQAFAKLLQSHDLEKKYYALVYGDFQK-TGMQEHFLEKDKGQNK--ALESERGKRVKSAFEKLacvESSVGSLSLLSVQIFTGKTHQIRTQLSLLSHPIVGDDKYGDTRKNARLRKtlplsyQLLHAYSLRFPkLPessvlFSLSEKCFFAPLP-
>UniRef50_C5M016(1-225:417) tRNA pseudouridine synthase C, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5M016_9ALVE  E=2e-29 s/c=0.58 id=30% cov=73%
------------------------------------------------------------HRLDKQTSGPVLIARKLESWKFIRRQFQKEQVTKRYVCLVDGICANDSGMIDSPIrvRRTEKHTSAEIGSGPASSSAHSEYRVLERYEEGCTLMSVRITTGVTHQIRVHMAQgLGHPIVGDKKYtpsGRGSELPCATRMpgrvFLHCYELGVkPDKTSGQKLtTIKCSLP-
>UniRef50_D0WNY8(93-298:306) RNA pseudouridylate synthase family protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNY8_9ACTO  E=2e-29 s/c=0.64 id=32% cov=93%
------DEPDAPlELDVVDGTDRWIAVDKPAGMATMPrGKHVAQTVTIAARRHFSNPEIVAAHRLDAATRGVLLLTLAKRWRAPYQMLFERREVRKAYLAVAPADDRFVEaQTVALALAKPRGSLKALVV---DGQPnAVTTVRLADERR-GLGLYEIEPKTGRTHQIRVTMSHLGIPIVGDWLY--PEVRDGGD-LQLLAARLEFVDPANGLEVALKS----
>UniRef50_A4SY63(88-299:299) Pseudouridine synthase n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SY63_POLSQ  E=8e-29 s/c=0.61 id=27% cov=91%
----------------LYQDEHILVADKPHFLPVTPSGLYLHQ-TLLNRLKKktGIQTLSPIHRIDRDTAGLVIFSINPYERANYQNLFRDRTVTKVYEAIAPYSKELANKLPLTYRSRLEESEHFLQMQEVEGEANADTYIELLEASEPWARYCLGPGSGKKHQLRCHLNALGAPIKHDQIYPvltpyQEYDLDFSKPLQLLAKEIAFKDPISGEFRSFIS----
>UniRef50_C4XWV4(146-353:432) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XWV4_CLAL4  E=2e-28 s/c=0.61 id=30% cov=91%
---------------VLYEDENILVVNKPAGVPTHPN-GIFRRNSLTEIVRFELGvSVYPCHRLDKGTSGVLVLAKTKTGKMlQEVLQNKKSHVEKWYVARVRGKFPFASCSYTSPVFSINTAGTGYLNIPNAERvpaTSSTHFKMVSYSPElDESIVFCRPISGKMHQIRVHLRNMGYPISNDPLYNAENGLGHAKNQLekeLYAQVLA-EWPCFGIDKTIRPP---
>UniRef50_UPI0001757DD8(33-247:274) PREDICTED: similar to AGAP004401-PA n=1 Tax=Tribolium castaneum RepID=UPI0001757DD8  E=4e-28 s/c=0.59 id=27% cov=92%
--------------TIVHRSANFIIIDKAYDLKI--NSNNRNEETVQTFMKKNLPylasnqlhhEYYFMHRLDYSTSGLMCVPVHKKACQVASQAIQQRKCKKYYIALVRGYLSSNLLDLNFPIGRDnsiTDIEKMCVTHDSNSRSARTLIVVLEnglFENYPSSKVLIRPITGRRHQIRVHCAHIGHTIVGDYTYSNKK-DTTPERMYLHSLRLVI--PNKIEDINVQTSDPF
>UniRef50_B1AIA2(84-288:315) Pseudouridine synthase n=18 Tax=Ureaplasma RepID=B1AIA2_UREP2   E=4e-28 s/c=0.61 id=25% cov=86%
-------------LDIIYEDKNILVVHKPIGLIVHEDNRYKN-DTLQNRIKKYLVKkdeyhpfdesafvPSLCHRLDLNTSGLIVAAKTANALRVITEMFKNNDVIRIYKCLTYNQLPKNNDVIYNFMYKaDDNTMIVQNFKTKFNKTAITKYTYIDKYKKYF-IYDIELLTGRTHQIRAVLNFLHAPIVGEQKYITKDIDKNQNymYQCLVSYKIKFI----------------
>UniRef50_C8RSX9(65-311:313) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RSX9_CORJE  E=1e-27 s/c=0.51 id=25% cov=95%
--------PVPGEIAVLHQDADIVVVDKPPFLATLPRGQHITETALVkARVQLGIPELSPSHRLDRLTRGVLLMTARPEIRGAYQTMFERRIPHKVYEALtplpeeapfapiapladwrsWDPPTPERPWRLEHSMSKTRGHLSTILTDgSPNALTLVTGLRTEWREGRKILVWRLEPHTGKTHQLRVVLRSLGLPILNDPLYTEltdaalfsidaptprpvyVEDEDFSSPMGLIAKELRFPDPLSGQERKFVS----
>UniRef50_C7R9V1(97-273:282) Pseudouridine synthase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9V1_KANKD  E=1e-27 s/c=0.71 id=33% cov=79%
-------------------DEgDYSVWNKPNGVWSQGSKWGDHCSIsrLVEEHFDYNRQTYVVHRLDKAARGLLILAHNKEAAAALSAMFAKRTVEKHYLAWVNGQFPHDSITIDKPI---------------DNKPAKSIVTLKEYDADKdRSLLSVQILTGRKHQIRIHLSSLGFPIIGDRLHGEPTQ---SQDLQLMAYKLDFQCPITGDK---------
>UniRef50_B9W8E1(97-288:405) Hydrolase, putative (Drap deaminase, putative) n=5 Tax=Candida RepID=B9W8E1_CANDC  E=2e-27 s/c=0.65 id=33% cov=75%
----------------IYEDNEILVVDKPSGIPTHPT-GNYYHNSLSEIIKQQYNMDSIwtCHRLDKVTSGVLVLAKTKNGGVKFSKLMRdsKQHTKKTYLARVSGKFPEGIHQYRCPIfAVNMNGYLMSGNMEELPTDSTTVFEQIKYNAClDQSLIKCIPITGKFHQIRIHLRNLGFPIVNDSFY--------------------------------------
>UniRef50_A4S7H5(47-309:318) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7H5_OSTLU   E=4e-27 s/c=0.47 id=33% cov=90%
----------------VYVDDDVYVLNKPAQTYVHdierlvergmvkcdDATTVDNRATTRDVPFNASESARVVHRLDRDTSGCLVVARNRDAIRSLSAQFADGTVQKTYVALCAAT-ADYDGVEDhrrvftgwgrakyglfrlydaADIGRALPGNKKVKV-----KHAETTIIVervitdgvalrfcepptaddADRRRHRVALARCSPLTGRTHQIRLHCASLGLPLVGDVRYGGPiaatrdgpiDAPFSARRVAgalLHAERVAFRHPKSNLRVDVHAPRP-
>UniRef50_B8LRV2(65-351:358) Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LRV2_PICSI  E=5e-27 s/c=0.43 id=29% cov=93%
----------------IYEDEWMIAVNKPSGvycehvLSSIPELLASSPSSAGAANDVNPLELHLANRLDRDTSGVMVITKLHKIAGQLVKAFTDRKVRKTYLALCIGPaPKWNNIYIESGHGRSKFGAWRVYSRTDVGrilpggtvvREMATHLKVLAVNANHRMhrdsvdkaqnssqgiafdlkedrfatvgdngstdsiekvvvteqnskapgqdrdivsspnirkndevLIRASPLSGRTHQIRLHCQYMGLPIRGDVKYEGPHIWKGITYanHALHAESLCFEHPVTNNMVKFHAPLP-
>UniRef50_Q73MW9(89-285:305) RNA pseudouridylate synthase family protein n=1 Tax=Treponema denticola RepID=Q73MW9_TREDE  E=8e-27 s/c=0.62 id=26% cov=83%
--------------DVLLKTDDLLFINKRSGELVHG------EKSLCEAVLKYFPskekslsfKVGALHRLDKDTSGILAFSQSLKGAQGFSRALQEGKIGKFYIGITEGRP-----------------SLSEFKSIIDGKECLCLIRILDFSKeENLSLVLFNLITGRKHQIRIQCSQFGTPLLNDKKYGSKQKKAFSEDLskkttyFLHAYKLIFSEPFLDDlPKEITAPLP-
>UniRef50_A8H661(108-295:305) Pseudouridine synthase n=7 Tax=Shewanella RepID=A8H661_SHEPA   E=1e-26 s/c=0.64 id=28% cov=85%
--------------ELLFDEEQYSVWYKPFGMRCQGSKWSDHTTInrFIETQLTPPRNAYIIHRLDLAATGLIVLGHTKKVTAAIAQLFETRALDKFYQVIVEGKFPEGQVTINTDV---------------DNKKALSHAHILEYNSElNQSKVQVKIESGRKHQIRIHMASLGHPVIGDRQHGNGS--DLTPNLQLTSCHLSFVCPVTGEDKVFELP---
>UniRef50_Q04RC2(2-184:277) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04RC2_LEPBJ   E=1e-26 s/c=0.66 id=23% cov=78%
-------PKVNLNIRIFYETESFLFAEKPPGIPVHATKDSKREN-FADRLQEQlsLEYLRTVNRLDLDTSGLVFLCKNPDKNKEADRILKSSS--KIYLCVADGIVEEEHFTETCYI---KDGNKKVRKVFSGGDKAVTEFLTLKRNlKDHYSVLLAKLHTGRRHQIRLHLSEKGHSIVGDYVYGK------------------------------------
>UniRef50_B7G0Q3(3-198:200) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0Q3_PHATR  E=2e-26 s/c=0.62 id=29% cov=82%
-----------------YQDRWVCV-NKPAGMSTHRSGGNRSNQFVVSTLLKRQlsRKVFPVHRLDHRTSGALLFAFDSEMCASLHDALREQSARKTYVCLvrgfWDNFFESDTATVDKALTVDGTKRSATTVFT---KLASTIILNNSAYGEKnvpisCSLILAVPTTGRTHQIRRHASAMGMPVLGDTQHGETKVNrwwrqkRGLDRLALHCLSL-------------------
>UniRef50_C4XE77(96-275:296) Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XE77_MYCFE  E=4e-26 s/c=0.67 id=29% cov=80%
-------------FKIIYEDDNILIVSKPINLAVHSENncLDKQVLSYLKYNQKDSFKPSHVGRLDKVTSGLMIYAKNYATLVELN--YKTGFFEKIY--KLKSDFNEVKKLVEINIQHDEKLHKMVVTNNAKDPLAKTLF----YTKNN--EIFASILTGKKHQIRLSMSHLKTPIYGDIKYDGKK----ADRLYLHCYSITF-----------------
>UniRef50_C4GD18(5-290:312) Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD18_9FIRM  E=7e-26 s/c=0.42 id=26% cov=89%
--------------EIIYEDADIFVCYKPAGFATQTASALQ--ADLVSELKNYRKsrgesdYIGLIGRLDQPVEGLMVIAKNPRAAGKLEAAQAKGRIDKYYLALTQGLPKgpdcgqeadslhrkgEWIFLENDMLPASRGKNGRLLAPEDKGtknghqpapedkgtknghqpavkdkgakktrlpapgtgeaktacqlapgtgeakkacllapgikgaRKARLEYQILDHSKTKdgraLALLRVHLLTGRRHQIRLQLSGLGSPILGDARYG---ADPNGQPLALCACQLSFPHPGTGERISYE-----
>UniRef50_C7NC29(98-302:314) Pseudouridine synthase n=2 Tax=Leptotrichia RepID=C7NC29_LEPBD   E=1e-25 s/c=0.58 id=19% cov=85%
--------------MIIFENEDFFIVNKSEKIPMHKGTGHKYGLAEVFKEIFKNENINFANRLDFETSGLVIGCKNLKFLRYISQKIRDNEIQKKYFAIVHnikNNIESKIFKIENYLTTTENKVIvSENPISKDSKKSITNFKkiliselkntkkildLLEKNNKNVFLLDVDLVTGRKHQIRAQLAHQKIPIVGDKKYG---IQDGSNKFFLCCYFLSFD----------------
>UniRef50_D2VR13(114-306:483) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VR13_NAEGR   E=2e-25 s/c=0.61 id=30% cov=79%
----------DRNIPILYDESDLLVVDKPASFPIHPCGRYRKNSLTYILEENGYGTLHVVHRLDHSTSGVLVLAKNKKVSGEIVEMIKTREkaIGKYYLAVVKGKWKgeyevsglvkdlnNSFVKCEKKVYCKNHKNGTWSADDELGtFEAITLFSGIVYNKEKdISLIMCKPITGRTHQIRIHLESIGNPIINDFFY--------------------------------------
>UniRef50_B5YM19(53-322:344) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM19_THAPS  E=2e-25 s/c=0.43 id=28% cov=95%
----------NINIPIIYENDQLLAVCKPPHI-SHHDDPASNQLGLLSLIRlqqqqqqqqdessfPYPHRLHGVHRLDRVTSGVLLLAKDSSVANELITKFRQGEVSKYYMAISgKKPKKKKQGWVKGQMVMGRRGSYKLVnenrdvldegdgddevedggevsQVKKKGGYAVTRFYTAglgdlqlaplpkcdgDESNDDELLipktaILFQPHTGKTHQLRVAAKSAGIPILGDVRYGGgtvtqREENANFDRTYLHASAIHFQ--LNDEDVTIWSPPPF
>UniRef50_B8C9J1(96-280:280) Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C9J1_THAPS  E=4e-25 s/c=0.63 id=34% cov=78%
---------EHPPVQIVYEDNSLLIVDKPSTIAIH-TSGAYNYNSLFEILSYWNPQAYGlgrlftVHRLDRLTSGLVLIAKTPELARSMGKCIMERDgCEKLYLTRVKGKFPlnvmekvASDGGIDAQNDNEHPHLTEEA-DRKGIKPAQTSFTLLTYDAvSDTSVVLAKPVTGRTHQIRLHLQQLGHPIANDHCY--------------------------------------
>UniRef50_A4S879(47-250:359) Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S879_OSTLU  E=5e-25 s/c=0.57 id=26% cov=78%
--------------EIVFECEktGLVVVEKPAGVPVLAGaapgwqgygnlaaltsalrrrraakddAADETRRTKRARATGDAGKVWAVNRIDAPVSGIWLAATSPKLAAKANVWMSKTSLGKTYLALVRGAQIECGVRIDSPLAKDKESSLA-VVSEKDGKPCATRVVVLQrRESEDVALVACRLEShGRYHQIRAHLSSIGHPIVFDSAYGDED----------------------------------
>UniRef50_A8Q8B1(90-266:937) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q8B1_MALGO  E=7e-25 s/c=0.66 id=33% cov=78%
------------PVRILHRDDsqgRIVVV-KPGSIPVHATGRYHHHTLVeMVKEQAKLQNLYTSNRLDRLTSGIMVCSTTKEAACELGNDFNAGLVNKAYVCRVVGRFPDGIVDCTEPILSVDRQSGLN-IVHPKGKECRTLFQRLSYdAATDSSVLVCRPITGRTHQIRVHAQWLGHAISNDPLYNHP-----------------------------------
>UniRef50_Q602D5(74-259:281) Ribosomal large subunit pseudouridine synthase n=3 Tax=Mycoplasma hyopneumoniae RepID=Q602D5_MYCH2  E=1e-24 s/c=0.62 id=25% cov=84%
------VPEFKLNLKIIYQDENILLVDKPQNLQVHGGKFN-LDLAVWNYLKipeNQVFKPSHIGRLDKKTSGIILYGLNYQSVVELNQ--KQKFFEKIYTFKSDINLKNTIKT-DVFIRKNNFQQKMEVTLkSPNSFFASTTF--YSKNQKKFAI----LHTGKKHQIRVSLSHLGFPIFGDEKYGGTRDKI----LYLHSFSLKF-----------------
>UniRef50_D2L201(86-269:313) Pseudouridine synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L201_9DELT  E=1e-24 s/c=0.62 id=28% cov=83%
--------------PVLVQTGDFAAVSKPAGLHS-AAIAHGGGQSLDDLLPALFPDRAaiLLSRLDRLTSGIVAVALTPGAGTRYRDLEDAGQVAKDYLAVVHGVIAD-PFVVDFRLDTADRAKTRVRFKSEPDPLRHTQVEPLDRL-DGLTLVRCRIAKGARHQIRAHLAGAGHPLVGDPVYGRGEGE----RLHLHCAALA------------------
>UniRef50_Q6MNN8(16-199:521) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNN8_BDEBA  E=3e-24 s/c=0.62 id=22% cov=84%
-----------------------IFVDKIAGLNTH-TPEYGQRGCVEIYEEELDRKLYTVHRLDKATSGALVFATSSEIAAQLTQAFEQHKVEKKYLFLTDKKIARTEFTYESFIQKEKNVFVSRDTQEPNSKTSFKWVKAL----GPYQLWEAVPHTGKPHQIRLHAEANGIAVLGDSDHNGTNHF----RLCLHSQVLGFE--LNGQKVRYETPLP-
>UniRef50_Q4UIK0(127-338:441) (RNA) pseudouridylate synthase, putative n=2 Tax=Theileria RepID=Q4UIK0_THEAN  E=6e-24 s/c=0.53 id=32% cov=78%
--------------PVVYEDDQYIVVSKPTSIPVYQTGTYNY-NSLMEIMKREIPSCRDlklftVHRIDRLVSGLVAFAKSSQDASNLSQAIRDNEVKKVYIARVKGDFsylintsnsdnKESDGDADNSLENVFESIGYMRVIskkegkyefvgendeDESYKRSVTRFKLIKYNKDlHESLVLCSPITGRTHQIRAHLKYLGYPISNDPWYNNDE----------------------------------
>UniRef50_B3L648(66-243:504) Ribosomal large subunit pseudouridylate synthase, putative n=6 Tax=Plasmodium RepID=B3L648_PLAKH  E=1e-23 s/c=0.62 id=31% cov=77%
-------------LSIIYENEFFLVVNKPYDIKLEKGKLDDVYPSVETLLRQktNLDVFRICGQLDYATSGLLIIAKDKLSCNILNYNIESKRISKIYLAILYGHLPLGVLHVNTPISKIKNNFKMKLCynyndYYDTGKYCyslIYPYKQCYLKNQKVTLCELRTITGRRHQLRLHALCLGSGIVGDETY--------------------------------------
>UniRef50_B7G895(90-323:383) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G895_PHATR  E=1e-23 s/c=0.47 id=29% cov=87%
-------PHDDVDVPVLFQDDQILVVHKPSGVA-HHNDADTGRLGILNLIRHqqttgrfaYPHRLYGVHRLDRVTSGILVLAKTPGAAQILTQAWREDRVTKYYVGLSGNKaTTSKQGHVRGRMIRGRRRSWLLTRETHGSNVAHTRFFTAGlghlappsstlTNVSPKTLLLFRPTTGRTHQLRVAAKSVGLPLWGDPVYRDGRHRTenasTPSRTLLHAA---------------------
>UniRef50_Q38EM9(999-1217:1279) RNA pseudouridylate synthase protein, putative n=4 Tax=Trypanosoma RepID=Q38EM9_9TRYP  E=2e-23 s/c=0.51 id=29% cov=83%
----------------------VAAVDKPAGMSTTLHVGHPHLLDFLAGNLPWkgpsapvLFQHGLVNRIDLGTSGLVLVADTEASLEEARRAsIVERCVEKVYRALVLHCPPPisridtsecwylnPCGIIMCDVLANGADFslqiaaynsskgGALPVGAMDRRSATTTYRVLQYFPrSGVYYLEIHLHTGRRHQIRQHFARLCHPLLGDGRYSRRAqvvgEEFGLQRPALHAVRVTLT----------------
>UniRef50_A7AQ79(154-353:465) RNA pseudouridylate synthase family protein n=1 Tax=Babesia bovis RepID=A7AQ79_BABBO  E=7e-23 s/c=0.55 id=30% cov=78%
---------------ILHEDDDYIAVSKPSSLPLYHTGTYYYNTLVEVLKNEVFKDSartlYPVHRLDKLTSGVIILAKSSKAASEFCEGIRNSRFRKVYIARVKGDFTNVFGdhecisindgigvgngsvaCCHGFMRCVSHKLSMHEFTLDDTKKdvkvAETRFRMLSYNSSlDESLLLCYPVTGRTHQIRAHLKYLGYPISNDKCYNDGE----------------------------------
>UniRef50_B1VE82(138-420:422) Putative pseudouridylate synthase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VE82_CORU7  E=3e-22 s/c=0.38 id=30% cov=94%
--------PVPGQLRLLFQDANLLVVDKPPFMATLP-RGQHIVETALVRARRQFgiPELSPAHRLDRLTRGVLMFTVRPEVRGPYQRLFDERVPEKTYEAVtlpadeaPFPPIPRFRGWQEWPApTPEQPWLLRHHMVKERGRLATYLVEPEAPAIDATAptdsgaaaaspshdmflappnaltkvvgvrserralaiaggptprerrvlVWELVPETGKTHQLRVALRTLGLPILNDPLYeelsdealrdptaalpspPFAGEEDFGRPMELTAQRLRFHDPLTGELREFS-----
>UniRef50_UPI00019264FF(32-222:329) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Hydra magnipapillata RepID=UPI00019264FF  E=4e-22 s/c=0.55 id=29% cov=76%
----------------LYMKDGLLAIHKPYGIPVHGGPKIKLSiaDFLPALEQKHGllaGSLELAHRLDKNTSGVLLLTYKKEMAKYLADLHENRQIEKSYLAILLGNVSRVTGVLNGELHETLRNGQFKQTINEISINKssvETNYTILDSNQDTCMLCLFKTFTGNKHQIRVHAYElLKCPILGDHRY--------------------------------------
>UniRef50_C4QP03(44-300:370) Ribosomal pseudouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QP03_SCHMA  E=5e-22 s/c=0.41 id=29% cov=87%
-------------LRVVHENQGFLVINKHPELLINCTTPWINCLTLQMQLFYNRPRYvnwklknmfHFVHRLDCPTSGLICIAYDTKAASMIRRAFENKEVKKYYLAIVWGYVGSFCdsglsssfvkhesklvHHIQMSIGsfrylwpntgrKQKIIVPITHPECYRPRESLTTVIVLDYGklmGEPATHILLIPETGRRHQLRVHCAiGLGHPIAGDTTYvrrpfdhpnivylndiytmHNVNLDYKLKHMMLHAYTMKI-----------------
>UniRef50_Q6FS81(5-174:223) Pseudouridylate synthase PUS5 n=1 Tax=Candida glabrata RepID=PUS5_CANGA  E=8e-22 s/c=0.62 id=30% cov=74%
-------------LKVVYDGMHYMIVYKSAGVLSQPGLASDSRPVLMSELRGLLSETldlYSVQRLDACVTGGTVVAKNKRAAMMFSRYLKQGggsgyGLTRRYLARINAQPVCDEGTIESPGM-------------------VTYYRRVRDD-----CVVVELKTGKKHQIRKHLAlNLNCPIVNDTYYGGSVVKGVNGQIALHSA---------------------
>UniRef50_B9QFU8(2025-2204:2273) RNA pseudouridylate synthase domain-containing protein, putative n=4 Tax=Toxoplasma gondii RepID=B9QFU8_TOXGO  E=1e-21 s/c=0.58 id=31% cov=68%
------------------------------------------------------------HRLDTPTSGPLLVAKSYAGLAFLRAQLASWRPKKVYLALVFGAvPLREKVRLVHPLRPtfeagKTGKKEMEVANTVDAKIAlsflsgITHY---SYGGRDFTLCRVEPVTGRTHQIRAQLAHIGHPIVADPIYVNDPAdralgRSLSDRVFLHCVSLSFLNILENENRT-------
>UniRef50_Q4A6V6(68-260:281) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6V6_MYCS5  E=9e-21 s/c=0.53 id=27% cov=80%
-------------FQIIYEDANILIIDKKENLVIH-GEDNSLDNQVLSYLKHkqiDSFKPSHVGRLDKETSGLIVYAKNYLTLKQLNE--KSFNFKKVYQFKSDF-LSSSPLELKLYFYKDENNKTKIsKTQKENSKLAHSIF--YCENNKKFA----QIITGRKHQIRLSLAYLNKPI----YGDKKYKGKKSTRLMLHSYYLKF-----------------
>UniRef50_A6GFD8(92-327:401) Pseudouridine synthase, RluD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFD8_9DELT  E=1e-20 s/c=0.43 id=27% cov=77%
-------------LEVLAETPDFVYVHKPAGVHTV-ALTPQQPGVLATAVAERWPECagasedpregGAVHRLDRPTSGVVAFARSPEIWARARKAFSAEQVRKRYLAVCLDLGARERGaamtwppalpegglrgwvlpaeveahpraelgslagidtatathpsfRVRAPLGRvaREAEIPSHTAVRLDGQRASSVVHPLAQASATSTgaqpwLLALELETGRRHQARCHLAWIGLPIVGDSLYG-------------------------------------
>UniRef50_C6M7K6(1-108:125) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M7K6_NEISI  E=6e-20 s/c=0.92 id=34% cov=43%
----------------------------------------------------------------------------------------------------------------------------MVRVSEEGQSAHTIFRVLNRFSDdllhqvglsHLTLVQATLKTGRTHQIRVHLQSQHCPIAGDERYGDYQANKrlqklGLKRMFLHAAELHLDHPLTGEKLILKAPLP-
>UniRef50_C5K8M1(333-520:602) Ribosomal large subunit pseudouridine synthase D, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K8M1_9ALVE  E=8e-20 s/c=0.53 id=36% cov=64%
---------------------------------------------------------RLANQLDFATSGALVLTLNKTADRETSALFQFRLTKKVYIAV-------CEGWVGDDELMKPRIITTGISSEGGGKMSSTIAVPVSTghllcDDIKCTVYILRLLTGRRHQLRLHLSYIGHPILGDYTYSTHLPKGGrgptLPRMLLHAWRLTLP----------------
>UniRef50_Q313X0(85-274:305) Pseudouridylate synthases 23S RNA-specific-like n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q313X0_DESDG  E=2e-19 s/c=0.52 id=24% cov=83%
--------------EVLCRTADYAAIFKPEGLHSARiaASPAPSVEDQLDSLFAGETPPVLVNRLDRPTSGMVLAAFGSHAAEAFRKFEQAGQVEKLYLAVVLGHMKAPVACRN---ELNMQNRQVTTVLPHEAQDPLRHTTVLplralpaeSMDGQKTTLVLAAIHRGARHQIRAHLAHAGHPIAGDCVYGSNQADGT---LYLHHFKI-------------------
>UniRef50_A8NRI8(175-361:422) RNA pseudouridylate synthase family protein n=1 Tax=Brugia malayi RepID=A8NRI8_BRUMA  E=5e-19 s/c=0.52 id=20% cov=75%
---------------IIYEDEELIAFNKPYQVACSNAPSNqaellRILPQLSSRITPHMNCLRIVKSIGKSVTGVTLFAKNQNVQEKIKTLYENGLIEQCYRVITNMAPAHQEATINIPLM--LPLSANSSNEITPFLEASTYYRVLRHDPKNhTSYMECVVNCDVPEQIRAHLGiGIACPIIGDIKY--------------------------------------
>UniRef50_A1VAY5(174-368:400) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1VAY5_DESVV  E=6e-19 s/c=0.49 id=27% cov=80%
----------------------LVAVYKPGGLHSAALAGGRAPNAENLL-----PALKLLNRLDGPTSGILMLAGDTAGERQWRKAEDEGGTRKTYLAVCTGRL-ERGTVVRAALDTARRTVTRVRPCDTDDRLRHTEVVPLAHFRlgdlanpitddsagvpacdETVTLVCCRIRKGARHQIRAHMAHIGHPLLGDDVYAAPASPPPGRmPLFLHHSRITLP----------------
>UniRef50_B8P3B5(60-229:348) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P3B5_POSPM  E=2e-17 s/c=0.54 id=33% cov=71%
----------------LYVDRGLLLVNKPSGLVCQYNRKDDREqnahsdfNDFTDDLKRQLSLDAdllPLHRLDKATTGALAFALTHSHAQDLAEQFNAHTVKKSYLAIVRggtASFPNRTGNIRGVLY-TTNGRVSSEAQGQWEKRAITEtdWEVLASSPvAPLSLVRLSPFTGHKHQLRVHMAKI------------------------------------------------
>UniRef50_B3S5A5(35-242:267) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S5A5_TRIAD  E=4e-17 s/c=0.43 id=26% cov=78%
---------------------NVIAINKPYGIASHDNPGIGYNCHSIYRelnLDDDSQPVYLSHVLDRNCTGILIGSK----------------------AITVGIPKAIKGTIDIPIVEDKTLKRVKLKMQDEGaskqeiaykyggrvRLASTNYKVLSKSEIGCALIEFETKTYYKKQIRVHAAdALGCPVLGDHQYSSKKighnqvvspkigqalnligGNTNTLKMHLHLRKVTIsKWPASGKVINL------
>UniRef50_Q5DGR1(245-502:567) SJCHGC01427 protein n=1 Tax=Schistosoma japonicum RepID=Q5DGR1_SCHJA  E=7e-17 s/c=0.35 id=29% cov=84%
--------------------ENVIIMNKPYGIASQPGADCKHNiVDLLPRIESMIRKRNHraskvkeetvdelstVHRLDKDSTGAMLIARNRDASLKLQEAFARRWIKKDYLCITVGIPRSEYGYIQLPLVERNFKEFHKMCIPKLDRHlqelackqtqldendetneydvtdafsvlynkmqtnnnnqPVTWYHLLDQRND-AGLMLCSTLTGIKHQVRAHLAfGLQTPILGDHKYSHGEylapqrlpkhlLEALNVRQpkvrylalHLHASSLHLR----------------
>UniRef50_C4R5D7(6-231:249) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R5D7_PICPG  E=1e-16 s/c=0.39 id=20% cov=91%
-----------------FEGPGFLVINKPPGIYTQPpsfrqGNRDKSNELLPLLEKQLQTTLRQVQRLDYETTGGLVVSTNKYTARMFHRNMQAlsnnildgrhrssnkgYILTKRYIALLNKPVTSIYeqlpKTSDGWRLLETQDIDESNSSSKLLLSKVRTIESCRPMHDKFPLM-FELITGRKHQIRRQIKQVfGTTIVNDVKYGAQlEFPQYHNQIALHSCFLSLK--VGLKKFQFDIPLEY
>UniRef50_C8QZD4(59-203:240) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD4_9DELT  E=4e-16 s/c=0.60 id=21% cov=67%
--------PPSRKLTVL--------LNKPAGYVTTMAD-PQGRPIVTSLINEPGLRLFPVGRLDLDTEGALLLTNDGELAQNILHP--SRQINRTYHATVKGRPN-----------REALQQLRRGIMLEGRRTWPARIRELRRNQESTTL-EVIIHEGRKRQVRKMFAAINHPVL-------------------------------------------
>UniRef50_UPI0001BCEF2E(45-203:296) pseudouridine synthase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCEF2E  E=5e-16 s/c=0.54 id=25% cov=65%
----------------IHSDEkrFYILLNKPRGYLST-ARDDRGRKTVLDLLPDFPARLYPVGRLDADTEGVLLITNDGAITQGLLHP--RFEIDKVYHA-----------EVAGPVTEGGLTRLRRGILLEDGMTASAKLRIL-RADKGYTVVETIIHEGRNRQVRRMFAAIGC----------------------------------------------
>UniRef50_B8BW13(327-581:614) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BW13_THAPS  E=1e-15 s/c=0.33 id=21% cov=93%
--------------EILDQGENYVIASKPASVIVHhsswtgkrsdPKRRWKEATPMLQRVRdATGRRVNLVHRLDRGASGCLVFSFAQneendngetppcSVTKSMIEAMQHPDARKTYLALCdgdgtwngVDYLNKGWFTFNNPVKDEWGKLIDDCCTDIRFVASKVLPPTSDEDPDNmegrkVSLILARPKTGRWHQVRQHLSSgtIGHALLGDSTHGKSRTNRIWKkdrhlmkeRTCLHLSRVQI--PATEYTpaIDISCPLP-
>UniRef50_B7FTR4(233-445:497) Predicted protein n=2 Tax=Bacillariophyta RepID=B7FTR4_PHATR   E=5e-15 s/c=0.39 id=25% cov=76%
----------------LYEDTTFIVVDKPPLLPTQPDSSNYVECcpgCVQDNLGPFTDIQGnevvrplLCHRVDSCVGGCVVLSKDGNGQKVFQEMQRERKLRKLYLAVTTQPVPlgmhlhwmwapqsargksggPPCQLVSHapPESRRKARQFWNRCVLEVVKCEPIKIgKEDSHTYDPAGKVHyqstIRLVTGRKHQVRAQLASLGAPIIRDSLY--------------------------------------
>UniRef50_B2V6W2(54-204:244) Pseudouridine synthase n=5 Tax=Bacteria RepID=B2V6W2_SULSY   E=1e-14 s/c=0.55 id=25% cov=68%
--------------EILYKENHYFMLNKPAGYIT--ATEDEEYPTVLD-LFSDLPiasKLFPVGRLDIDTEGLLILTTDGQFGHRLSHP--KWNIEKEYYAIVEGDISN----IDFSESENKGIYLK----KEKYQTKPFKVKVLNTSKDK-SEILITLTEGKYHIVKRIMQELGYPVL-------------------------------------------
>UniRef50_UPI000194D267(27-204:270) PREDICTED: similar to RNA pseudouridylate synthase domain-containing protein 3 n=1 Tax=Taeniopygia guttata RepID=UPI000194D267  E=1e-14 s/c=0.46 id=23% cov=79%
---------------VVHREGALLALSKPPGLPILGRPGDLSLDSLLPALRRRLGlaaELHVVKAPAREYSGLVLLSscyhTTKKLHQFFTSARRRGQYPATYRAVTVGVPAEVEGEVSTGL--------CWQQQGDRAMSTLTHYRVLSTTG-GCALLQLQPRTAFPEQLQVHLTLLLCPALGDHKHSSRVGRVLGVPFCL------------------------
>UniRef50_D0NJP5(61-423:458) RNA pseudouridylate synthase-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJP5_PHYIN  E=2e-14 s/c=0.22 id=35% cov=94%
---------DQLHLRVLSRDEHFVVLNKGPDVRM----DGAFDVTLEKALARDFPQvekFRWIHQLDFATSGVLVVGVNKDATATGCRLFREKQVQKEYLAVVRGHLPfnpaesvdtaalpakactfsklglliqdmeemerlrnqqrgsrahqktpgyprgvrhgpnlftmeqaqllpeareltpaelaftkmtwhdltkeekgaytekakadkrrflkefseflnqekirlarkrkyesfdgedseeanePVAYVFDAPVIEPHRSTGVFRMlvgteTDTAAKQSTTMCFVLGhaiYKGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDE--APRMMLHAWRIWLRgRPADQKKygdLYFESPDPF
>UniRef50_A4RUK5(129-341:371) Predicted protein n=2 Tax=Ostreococcus RepID=A4RUK5_OSTLU   E=3e-14 s/c=0.38 id=21% cov=81%
--------------------------HKPAGVSVVPTVDNVKESCLAMLERAAGLKEGtlkPIHRLDVGTEGVLVLGTTSAFAKEFGDMLADRSVTKVYRVLTENAVPRGVHIhdaepategprkmimtkvdtddIDGEIERSAERGGGERGGVSGPKRCILRVLKSENIAPARWETKVELLTGRTHQIRAQFAALSAPLVGETLYrapgddGEVRVQKPSEYLGLQASEMHI-----------------
>UniRef50_Q9Z8E0(77-200:232) Pseudouridine synthase n=1 Tax=Chlamydophila pneumoniae RepID=Q9Z8E0_CHLPN  E=3e-14 s/c=0.65 id=35% cov=42%
-------PSTKQQPSILWEDDYSIIYEKPPHLTT--------------EQMAHMTRFFTVHRLDKGTSGCLLMGKSKQAATELMKLFKQRKIHKQYIAFVFGHPKKKFGTV------------------------------------------------------------------------------------------------------------
>UniRef50_UPI000194C6EE(169-289:479) PREDICTED: similar to RNA pseudouridylate synthase domain containing 2 n=1 Tax=Taeniopygia guttata RepID=UPI000194C6EE  E=1e-13 s/c=0.65 id=33% cov=39%
-------PPVtAQPIRILAEDEEVVVVDKPSSLPVHPcGRFRHNTVIFILGKEHGLRELHTLHRLDRMTSGVLMFAKTAAVSKRIDEQVRQRQ--------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3CPQ5(54-197:242) Pseudouridine synthase n=3 Tax=Firmicutes RepID=A3CPQ5_STRSV   E=1e-13 s/c=0.55 id=29% cov=57%
-------------------------LNKPRGVISSVSD-DKGRKTVVELLPQVKERIYPVGRLDWDTSGILILTNDGDFTDEMIHP--RNEIDKVYVARVKGLANK---EVLRPLTR--------GIEIEGRKTKPAVYEIIKVDPaKNRSVVQLTIHEGRNHQ--------------------------------------------------------
>UniRef50_B8DUD9(82-219:257) Pseudouridine synthase n=8 Tax=Bifidobacterium RepID=B8DUD9_BIFA0   E=6e-13 s/c=0.55 id=22% cov=63%
-----------------------LALNKPRKVLSTM-DDPKGRYTLRDIVGDKYERIFHMGRLDYDSEGLILMTNDGELSQHVMHP--KYEVEKTYIATLEGH---MSGTVCRRLVR-------TGVQLDDGWIKLDHCSIIDSNRDQ-TIVKVVLHSGRNRIVRRIFGAIGFPV--------------------------------------------
>UniRef50_D1CFA0(66-200:253) Pseudouridine synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFA0_THET1  E=1e-12 s/c=0.56 id=21% cov=62%
-----------------------ILLNKPAGVLST-AKDERGRKTVIDLL-GQSNRVYPVGRLDKDSEGLMLLTNDGELAQRITHP--RYGVHKQY-----------MVEVEGYFSDRSLQDLLQGVELEDGFSKPLDAKIISRSRDK-SKLLITMGEGRKRQVRRTLAALGY----------------------------------------------
>UniRef50_A3BN26-2(130-317:400) Isoform 2 of RNA pseudourine synthase 6, chloroplastic n=2 Tax=Poaceae RepID=A3BN26-2  E=2e-12 s/c=0.40 id=24% cov=73%
--------------------DNYVVLDKPAA-TSVGGATDNIEESCVVFTSRALGLETPLmttHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTTAPVS--TGIITHYMRPINRAPRLVSEDHIKGWhvcqmeildckkvPWPSSLIRKVHKVDNCGWpqqeaayeCKINLLTGKTHQIRAQLAAIGTPIVGDSAY--------------------------------------
>UniRef50_B0S1L0(58-199:242) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S1L0_FINM2   E=2e-12 s/c=0.52 id=24% cov=65%
------------------EDKIYIAINKPIGYASTVKDKFADKK-VVDLIKSDT-RVYPVGRLDKDSHGLLILTNDGEFTYELTHPKFEH--KKIYEVLVKGKPN-----------KTEIKQLKDGILLDGYKLKKSKIEFIENVKND-TKYRVTIFEGRNRQIRRMFDFINHPVL-------------------------------------------
>UniRef50_C0EB54(59-203:248) Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT  E=3e-12 s/c=0.51 id=22% cov=63%
-----------------YQEHLYLMLNKPQGVVS--ATDDKVHRTVLDLVPPELRRRglFPAGRLDRDTVGFVLITDDGEFAHNILSP--RHHVPKTYEA-----------GLDGPIGENELSVLAQGVVLGDGtKCRPAELTVLQSGERP--LIQIVIVEGRYHQIKRMFAAVG-----------------------------------------------
>UniRef50_C6VXU0(383-517:555) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXU0_DYAFD  E=3e-12 s/c=0.55 id=23% cov=34%
-----------------------ILINKPKDYITTTDDPEERKTVLDIIAGACSERVYPVGRLDRNTTGLLLLTNDGELAEKLTHP--SSGIKKIYQA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1J642(57-200:244) Pseudouridine synthase n=51 Tax=Streptococcus RepID=Q1J642_STRPF   E=3e-12 s/c=0.51 id=22% cov=65%
----------------VYESFVYYLLNKPSGYVS--ATQDRQQATVMELLDdtARQKTVFPVGRLDKDTRGLLLLTNNGQLAHDLLSP--KKHVTKEYLAKVAGIMTEAD-----------KDYFARGISLKDHQCLPAHLEVLASDlQQQTSLVKITIQEGKFHQVKRMVAACG-----------------------------------------------
>UniRef50_Q14P18(62-203:267) Pseudouridine synthase n=2 Tax=Mollicutes RepID=Q14P18_SPICI   E=3e-12 s/c=0.52 id=21% cov=55%
-----------------------------------------HRKTVLTYVKGISERIYPVGRLDYDTSGLLLLTNDGEFTNIITHP--SHIINKTYHVL-----------LSGYLSKQQLQQLATGIEIEPGIIrSQAQAKLVKYEEvKNVSILLLTIHEVTKHQVKKMIQSLGH----------------------------------------------
>UniRef50_A3YG85(4-152:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=A3YG85_9GAMM  E=2e-11 s/c=0.48 id=22% cov=66%
----------------------IIVFNKPFQVLSQFTT-DEEKATLSSFI--DKANFYPAGRLDYDSEGLLLLTDHGALQHLIASP--QHKMPKTYLVqvegeLTKEAVEQLRVGVEL---KDGLTKPAEAKIASDFEPWPRHPPIRERKNIPTSWLELTITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_B0VG32(102-236:279) Pseudouridine synthase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG32_9BACT  E=7e-11 s/c=0.51 id=22% cov=58%
-----------------------LILNKPRGYVVSQND-ELGRKTVYSLLPPKGKQLAYAGRLDKESEGLLFFTNDTALINLLTHP--KNKVEKVYRV-----------DINRPLNNMELNMLRKGVEIEGGKTLPAGIFVKSKNANGMTL-KIVITEGRKRQIR------------------------------------------------------
>UniRef50_Q5ZXB8(26-174:222) Pseudouridine synthase n=2 Tax=Legionella pneumophila RepID=Q5ZXB8_LEGPH  E=7e-11 s/c=0.47 id=24% cov=67%
----------------------LILFNKPYGILTQfTGELPEQTLSAFIKL----PGFYAAGRLDKQSEGLLILTDDGKLQHRLTHPKFEK--KKHYWVQVEGVPtdKDLQPLRKGLVIKDITFLPAEARLISEPKIWPRIPPIRERKHIPTTWLEIILREGKNHQIRKMTAAIGFP---------------------------------------------
>UniRef50_A6G735(88-235:300) Pseudouridine synthase n=2 Tax=Bacteria RepID=A6G735_9DELT   E=8e-11 s/c=0.47 id=25% cov=63%
------------------------VLNKPDGVVSsaAGSVDERGRPTVISLLHGVSERLYPVGRLDFHSRGVLLLTNDGGLAEALTHP--RHGVVKTYHVKFQGK-----------LTEEQEQLLRDGVELDDG--AITR-PVAELFAFRETatnvWYQIGIREGLNRQIRRMGEAIGHPVL-------------------------------------------
>UniRef50_Q01Z61(75-208:264) Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z61_SOLUE  E=9e-11 s/c=0.52 id=21% cov=59%
-----------------------ILLYKPKGYLTTY-RDPEGRPTVYALLGDVGKWLSPVGRLDLDTSGLLVLTNDNDFAERITNP--EHKVPKTYQIKAATV-----------LSDEQIERLRAGVELSDGPTRPAEVKRL-RDGPKHTFLEMTITEGRNRQVRR-----------------------------------------------------
>UniRef50_A3ZQL4(78-215:517) Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQL4_9PLAN  E=9e-11 s/c=0.50 id=24% cov=62%
-------------------------LNKPPGVLS--TNFDPAGRTRVIDMVPQDVRLFTIGRLDRASEGLIVVTNDGELANRLAHP--RYEIEKTYRVEVAGHPEP-----------DAITFVRRGVHLAEGFVQPVSV-VMKRKNKQSTTLEVILDEGKNREIRRLMAKIGHKVL-------------------------------------------
>UniRef50_A9BF27(38-182:220) Pseudouridine synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF27_PETMO  E=1e-10 s/c=0.47 id=23% cov=61%
-------------------------LNKPKGILCT-FKDDFGRKTINDLIKGKIeERVFYVGRLDYDSSGLLLLTNDGDLANYLLRP--ENKVTKVYEVLVKGSPS-----------KKELQMLEEGITLETGyKTMKSKVKILKKQKD-LSLLQISLNEGKKRQIKLMIKALGY----------------------------------------------
>UniRef50_B4D966(62-192:237) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D966_9BACT  E=1e-10 s/c=0.52 id=19% cov=60%
-----------------------VLLNKPAGYVCT-ASDERDRKTIFDLLPANWPRVYHVGRLDKDSEGLLLVTNDGDLSLALTHP--RYKIEKEYEVLLDKPFNPQD--------REKLLKGFHII---GGRAKAERVEIL-----NPTHLSLTLTQGIKRQIRLMLYDLGY----------------------------------------------
>UniRef50_D0IWI1(43-192:223) Pseudouridine synthase n=2 Tax=Comamonas testosteroni RepID=D0IWI1_COMTE  E=1e-10 s/c=0.46 id=23% cov=54%
----------------------------------------------------DVPGVYVAGRLDADSEGLLLLTNDGQLQARIADP--RHKMEKTYWVQVEGIPDEAALQrlregVELSDGKTLPAKARLIEPQPLMWPRNPPIRVRQNIPD--CWIELIIREGRNRQVRRMTAAVGHP---------------------------------------------
>UniRef50_Q9U190(1166-1408:1469) Possible RNA pseudouridylate synthase n=3 Tax=Leishmania RepID=Q9U190_LEIMA  E=1e-10 s/c=0.28 id=33% cov=67%
-------------------------------------------------------QQGLVNRVDVGTSGVVLVARTADAlHGAADAMIREHHMRKTYRALVQRWPPFSSSssssastvrydddnaaaaplfsvspflspmpsaVVCAPVYaagatassisrRSALPLSHGRQLQSPGQPsadalaasragstlswsssvpvslsslehvhqqyatlhaalqdqrnAITRYRVLEYFASaGVAYVQVELCSGRRHQIRQHFAQLGFPLVGDARYhagvvaGHAGTTLGMRRAALHAYTV-------------------
>UniRef50_C6VP86(52-205:246) Pseudouridine synthase n=4 Tax=Lactobacillaceae RepID=C6VP86_LACPJ   E=2e-10 s/c=0.44 id=24% cov=58%
------------------------VMNKPVGVIT--ATTDSAAKTVMDLFNTTDFRDdlFPVGRLDKDTEGILVITNDGALSHDLLSP--NHHVTKVYEA-------EVTGEITAAQLANFNDGITLKDGTEL-QPAQAEI-VQFHEIENFTTIRIMIHEGKYHQ--------------------------------------------------------
>UniRef50_A2RP35(139-324:328) Pseudouridine synthase n=172 Tax=Firmicutes RepID=A2RP35_LACLM   E=2e-10 s/c=0.37 id=22% cov=80%
--------------QILdYQEYYYYLLNKPQGVVS--ATKDNVFKTVVQLLSEKDFRkdIFPVGRLDKNTEGLLILTNDGALGHDLTQP--KKHVEKEYFAR-----------IDGKVTDEIINKFAEGLTLKNGEKArPGELFVEKTYKGDsqsgwVSEIRVIIHEGKFHQVKRMFEAVEMYVL----YLKRirmGNLALDSDLALGAYR-----PLTIEEIE-------
>UniRef50_A0Z1Z6(25-177:208) Pseudouridylate synthase n=2 Tax=Proteobacteria RepID=A0Z1Z6_9GAMM   E=3e-10 s/c=0.44 id=19% cov=69%
---------------------DIILLNKPFRVLSQFSDRDNDPPRLTLANLLSAPEFRVAGRLDYDSEGLTLLTDDGKLQQQIANP--KFKVWKTYWVQVEGAPKQQaiEQLTSGVVLNDGLTKPAKVRAIDPPDLWERSPSVRFRAHIPDAWLEISIQEGRNRQIRRMTAAVNLP---------------------------------------------
>UniRef50_A4BDP6(4-153:228) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BDP6_9GAMM  E=3e-10 s/c=0.45 id=26% cov=55%
----------------------------------------------------DVPEVYSAGRLDYDSEGLLLLTDDGALIHSMMNP--RFKTPKTYLAQVEGDItDEAIRRLESGLqLKDGPTLPaKARRVSEPAWLWPRQPPIRERATIPASWVELTLVEGRNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_C3XHK3(100-184:671) Pseudouridine synthase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHK3_9HELI  E=4e-10 s/c=0.79 id=33% cov=39%
---------------------YFCVFNKPSKLLTHPKNLADSKSILDSLRYYFGKHANPCHRLDYETSGLLVCSIDKQSEVMLKNLFLQKGVEKSYMAILHGEVKE-----------------------------------------------------------------------------------------------------------------
>UniRef50_B2UKZ1(51-200:230) Pseudouridine synthase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKZ1_AKKM8  E=5e-10 s/c=0.45 id=21% cov=65%
-------------------DGLYAALYKPEGYTCSHDDGEGNLiyDLLPFQWRHRNPAVSSVGRLDKETSGLLLLTDDGKFIHRMTSP--RHHVAKVYEAVT-----------EEDIPTEAVELFASGTLTLNGETRPCAPALLEIREPRRAL--LTLTEGKYHQVRRMLAAVGAPVL-------------------------------------------
>UniRef50_C0D9T3(103-282:300) Pseudouridine synthase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9T3_9CLOT  E=5e-10 s/c=0.37 id=21% cov=75%
----------------------LLAVNKPKGVVCTASDKDKAPNIV--DMIQYPVRVYYVGRLDKDSEGLVLMTNQGDLVNKIMRSGNAH--EKEYQVV-----------VDRPVTAEFLARMEKGVRLKELDRTTLPCKVRKTGDKRFSIV---LTQGLNRQIRRMCEACGCHVrslkrvrvmnicLGDLKsgeYRQVEGAEYREFMKLleHSTNLSFR----------------
>UniRef50_B2ULL1(2-153:188) Pseudouridine synthase n=4 Tax=Bacteria RepID=B2ULL1_AKKM8   E=6e-10 s/c=0.44 id=24% cov=67%
----------------------ILAFNKPYGILSQFTKEAPHHRTLAE--FGFPPGVYPVGRLDADSEGLLLLSDEKGLADRLLNPSGRH--PRTYWSQVEGTPSETDlrplelGGLRIRGHCTLPCRARLMRREPDVPPRIP--PVRYRASIPTSWLELTLVEGKNRQVRRMTAAIGFP---------------------------------------------
>UniRef50_B9KY92(69-206:282) Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY92_THERP  E=7e-10 s/c=0.48 id=22% cov=37%
-----------------------IVLHKPVGYITTTADEYGRKTVL--DLVQVPERVVPVGRLDRDSSGLLLLTNDGDLIYRITHP--RYELEKEYEVLVDGFPPP-----------------------------------------------------------------------------------------------------------------
>UniRef50_C2MA52(266-421:472) Pseudouridine synthase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA52_9PORP  E=7e-10 s/c=0.42 id=22% cov=55%
-------------------------------------------------------RIYPIGRLDRNTTGILLLTNDGDLAVRLMHPaFRKK---KIYeVALDKEVTVEHMQMIAHGFELEDGEIHADAISYITGQ---THDKV-----------GIEIHSGRNRIVRRIFEHLGYRVVHlDRVYYAGLTKKDLPR---------------------------
>UniRef50_Q2NIZ3(62-205:245) Pseudouridine synthase n=5 Tax=Candidatus Phytoplasma RepID=Q2NIZ3_AYWBP  E=8e-10 s/c=0.46 id=20% cov=63%
-------------------------LNKPNGFLST-AKDKKNRPTVLDLIEEaSIQRLYPIGRLDFNTTGLLLITNDGDLTQKLTHP--SFCIPKEYHVK-----------INACLQKKDLSTFCKGIIIDKKYLAVCKeidILKISYMPKPSTWLKLVITEGKNRQVRKMMQALGYQVL-------------------------------------------
>UniRef50_Q15Q67(73-211:241) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q15Q67_PSEA6   E=9e-10 s/c=0.47 id=27% cov=62%
----------------------LVMLNKPLGYVCSHDNNEGMRiyDLLPERWEFRNPKIVSVGRLDKDTSGLILVTDDTKLVHQLTSP--KHHVDKVYQV-----------SVDCPLQSDIIDSFAKGVVLGEGaeQCLPAKIEIVSENVANVTLNE-----GKYHQVRRMFAACGYHV--------------------------------------------
>UniRef50_D2R7V9(95-232:811) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7V9_9PLAN  E=1e-09 s/c=0.48 id=21% cov=63%
------------------------VVNKPEGVVT--TNYDQAGRTRVIDLVPTDERVFAVGRLDRASEGLIIVTNDGEFANRVTHP--RYGVTKTYLVRVAGEASTA-----------ELAKLRRGIHLSDGFCKVDAIQV-KRRHKQSTDMVIQLSEGKNREIRRILARIGHKVL-------------------------------------------
>UniRef50_Q13UY7(84-222:261) Pseudouridine synthase n=45 Tax=root RepID=Q13UY7_BURXL   E=2e-09 s/c=0.46 id=26% cov=36%
-----------------YREHAYLLLNKPAGYEC--SRDPQHHLSVFSLLPPQFAGRGVqcVGRLDQDTTGLLLLSDDGKFVHLFTSP--KRKVPKVYVA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_C9LMF3(76-235:277) Ribosomal small subunit pseudouridine synthase A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMF3_9FIRM  E=3e-09 s/c=0.40 id=19% cov=66%
-------------------------LNKPAGVIT--ATEDRYQKTVLDFFgERRRKDLSPVGRLDKDTVGLLLVTNDGGFHHRLLSP--KKHIDKEYYARIDGRVDEADREkFEKGIYVDEIFtalPAKLMIDGYRENALESDFMDLANSRapksaleNGVSEIRVVVQEGKFHQIKRMFHALG-----------------------------------------------
>UniRef50_A3JIZ1(121-256:367) Pseudouridine synthase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIZ1_9ALTE  E=3e-09 s/c=0.47 id=24% cov=33%
----------------------VLIYNKPEGEVTTR-KDPEGRPTVFDRLPRlREHRWISIGRLDLNTTGLVMFTTDGELANRLMHP--SSEIDREY---------------------------------------------------------------------------------------------------------------------------
>UniRef50_B8J2T9(242-407:493) Pseudouridine synthase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J2T9_DESDA  E=4e-09 s/c=0.38 id=28% cov=56%
-------------------------------------------------------------RLDFGTSGLLCAALSTSAAEDFRAAEAAGLCEKRYVALLSGVLSgPVVARQELDVSKRRKSRVLPALAHH---TRWTEFWPLHVWRPgdvsvqalqallgpagggapendapvvtpeagglpvpaaGLTLAACRIRRGARHQIRAHAAGLGHPLWGDSLYAEPEE---------------------------------
>UniRef50_A9AXM1(63-197:728) Pseudouridine synthase n=3 Tax=Bacteria RepID=A9AXM1_HERA2   E=5e-09 s/c=0.47 id=24% cov=62%
---------------------HYVLLHKPSSVMTTL-HDPEGRQTVADLVKSHN-RLFPVGRLDYDSEGLLLLTDDGDLTFRLTHP--SFEVEKEYQALLNQTPS-----------VEQLREWRNGVELDDGKTAPAWIELLNETADG-TWVRVVIHEGRNRQIRRVAEALG-----------------------------------------------
>UniRef50_Q4D992(492-661:682) Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi RepID=Q4D992_TRYCR  E=8e-09 s/c=0.37 id=31% cov=45%
------------------------------------------------------------------------------------------------------------------------SKIQMQRLKESMKQAITLIRLLAYdAACDESVVECLLLTGRTHQVRVHLASLGHPIRGDKKYirlaadspsiplrtdlrdeeeedeeeeeEESKGYLSSHGIFLHAWRYTLRYAAGEAPEVLEAPPP-
>UniRef50_B0SGV7(66-204:247) Pseudouridylate synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SGV7_LEPBA  E=9e-09 s/c=0.45 id=17% cov=63%
----------------------IIAFNKPPGFLTSH-EDKHHENTIFTLLPESFQKYNYAGRLDLDSRGLILLSIDGNFIQKVTHP--KNKIDKEYI-ISLKQPVSWKKIAEEFMLGVREGGETLRALAV--KPA--NVFPEKTPPGFTSYLSIVLKEGKKRQIRR-----------------------------------------------------
>UniRef50_C1N350(62-203:230) Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N350_9CHLO  E=3e-08 s/c=0.43 id=24% cov=30%
-------------------------------------------------------RLFPVGRLDKDSTGLILLTSDGRLPNAALRSGRKR--DKKYLVVVDAVVRPEDvrmlrdgVVISTPVQRDRVDR-------------------------------------------------------------------------------------------------
>UniRef50_Q8ZGM2(62-198:235) Ribosomal small subunit pseudouridine synthase A n=134 Tax=Gammaproteobacteria RepID=RSUA_YERPE  E=3e-08 s/c=0.44 id=22% cov=47%
-------------------------------------------------------KLHAAGRLDIDTTGLVLMTDDGQWSHRVTSP--RHHCEKTYLV-----------TLEHPLSDDTAQQFADGVQLYNEK-SLTKPAQLDVIEPQ--RVRLTISEGRYHQVKRMFAAVG-----------------------------------------------
>UniRef50_Q12AB3(160-317:544) Pseudouridine synthase n=8 Tax=Proteobacteria RepID=Q12AB3_POLSJ   E=4e-08 s/c=0.38 id=26% cov=23%
----------------------VIAYHKPSGeVVTH--DDPQNRPTVFRRLPKLFQgKWQSVGRLDLNTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A7HJ83(75-207:245) RNA-binding S4 domain protein n=3 Tax=Thermotogaceae RepID=A7HJ83_FERNB  E=6e-08 s/c=0.45 id=18% cov=32%
-----------------------IIFHKPSGFVSTTSDREPSVLNLID--HPYLNELHIAGRLDKDVEGLLILTNDGEFTHNLISP--KKHIEKEYW--------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI000187DE6E(67-174:175) hypothetical protein MPER_11162 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187DE6E  E=6e-08 s/c=0.55 id=22% cov=42%
-------PPVtATPVKVLLEDKerEFLIVDKPGSIPVH-ACGRYHRNTLVAILNHDFGYEKVYRLMIIPTSAIC--------ARKVTEEFVSGTVRKEYVARCIGKFPEGE---------------------------------------------------------------------------------------------------------------
>UniRef50_C8PSZ6(76-242:252) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PSZ6_9SPIO  E=7e-08 s/c=0.36 id=22% cov=23%
-----------------------VLLNKPAGFVCTLSDEKGRPTAADLLKEAYSERLYNIGRLDMFSSGAILF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q2G8T2(93-228:270) Pseudouridine synthase n=5 Tax=Sphingomonadales RepID=Q2G8T2_NOVAD   E=9e-08 s/c=0.44 id=20% cov=61%
--------------------------HKPSGLITAerdPTGRPTIYTALRNALPQGTPRVMPVGRLDVNTEGLLLMTNDGELKRALELP--STGIPRTYRART-------FGDISQARLEELMEGIEIDGVRYGSINAN-----LERSAGRNKWIELTLTEGKNREVRRVLEHLG-----------------------------------------------
>UniRef50_Q8ZPZ1(41-190:221) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Enterobacteriaceae RepID=RLUE_SALTY  E=1e-07 s/c=0.39 id=21% cov=51%
-------------------------------------------------------------RLDRDSEGLLVLTNDGALQARLTQP--GKRTGKIYYVQVEGIPDNaalQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHP---------------------------------------------
>UniRef50_C6W5I1(4-158:201) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5I1_DYAFD  E=2e-07 s/c=0.38 id=19% cov=68%
-------------------------IYKPFNMLSQFSREGDHQ-TLADLGFTFAKDIYPVGRLDADSEGLLLLTNDNFLKTKLLEP-RNRHTRTYYVQVEGEVTDEACRQLSAGVSISINGKQYKTLPAEIAKIAEPELpernpPIRFRKNIPTSWLSVTLREGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q1MQ05(64-232:270) Pseudouridine synthase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQ05_LAWIP  E=2e-07 s/c=0.34 id=19% cov=48%
----------------------------------------------------------PVGRLDFFSEGLLLITNDGELTQRLTHP--RYHISKVYHVL-----------IRERILNTTLKNISKGITLSDGtKLPPAKVRVLSSITEtNTTWLEITLQQGINRQIRRMCKELGLTIL-------------------------------------------
>UniRef50_A1UU09(94-228:499) Pseudouridine synthase n=4 Tax=Bartonella RepID=A1UU09_BARBK   E=3e-07 s/c=0.43 id=31% cov=23%
----------------------LWLYHKPSGLVTT-NRDPEGRPTVFDNLPKEMPRVVSVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C3BQR1(30-167:203) Pseudouridine synthase n=3 Tax=Bacillus RepID=C3BQR1_9BACI   E=4e-07 s/c=0.41 id=25% cov=24%
------------------EDKEkiYIAFHKPVGITCTAAD---HIDGNIIEYINHPERIFPVGRLDKASEGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B6W7S5(64-197:231) Pseudouridine synthase n=2 Tax=Anaerococcus RepID=B6W7S5_9FIRM   E=4e-07 s/c=0.43 id=19% cov=33%
-------------------------LNKPIGFIS--SNYDPHNKKDLNSLVKIDHRFFCAGRLDKDSHGLMLITNDGKITNKLIHP--SKKIEKTYIVKV-----------------------------------------------------------------------------------------------------------------------
>UniRef50_A6LLC7(61-191:230) RNA-binding S4 domain protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LLC7_THEM4  E=5e-07 s/c=0.43 id=17% cov=55%
-----------------------IIFNKPTGYTSSKSEFERNIFEFID--HPYVENLHIAGRLDKDVEGLLLITNDGIFTHKITSP--KSKIEKEYIVK-----------VDKEISDEMIQKAKDGIVLKNG----TRFKpaIIKRLKDNF--ISITITEGKYHEI-------------------------------------------------------
>UniRef50_Q83IR6(65-198:290) Ribosomal large subunit pseudouridine synthase F n=90 Tax=Bacteria RepID=RLUF_SHIFL  E=6e-07 s/c=0.42 id=24% cov=23%
------------------EDLVLIALNKPVGIVS--TTEDGERDNIVDFVN-HSKRVFPIGRLDKDSQGLI----------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C8WBY9(332-466:509) Pseudouridine synthase n=3 Tax=Zymomonas mobilis RepID=C8WBY9_ZYMMN   E=8e-07 s/c=0.41 id=23% cov=60%
--------------------------HKATGLLTT-ERDPEGRKTIYDRLPADLPRVMPVGRLDMNTEGLLLLTTDGGF-KRMLELPATH-IERCYRARVFGDVSQDQ--LEELIEGVTIDGIHYGSIDAN----------LERRTGRNGWVEMKLHEGRNREVRRVLGYLG-----------------------------------------------
>UniRef50_Q30U38(45-213:312) Pseudouridine synthase n=12 Tax=Epsilonproteobacteria RepID=Q30U38_SULDN  E=9e-07 s/c=0.33 id=16% cov=67%
----------------------VIVYNKPKGELVTKSD-PKERKTIYDTLPKEYKHYVPVGRLDYASEGLLLLTD----ASKVASALMESNLERIY---KIKIKGEVTSEMEAAMLNGMMLDDATAGGHSHSKVTSMEFKPfigykIQKNEPNYSILKVALSEGKNRELRRFFAHFGTDIV-------------------------------------------
>UniRef50_Q4Z2R8(124-281:318) Pseudouridine synthetase, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4Z2R8_PLABE  E=9e-07 s/c=0.35 id=23% cov=48%
-----------------------------------------------------------VGRLDRNTSGVLLFTNEYTWVNKLTHPKYER-VRKY------------MIHIEGPVRMDALKMLANGVYLKDEdnnkkkkkKTQPAFIEVLREENvkiqnqiKKITVLNISIKEGRNRQIRKMFQQINQPIV-------------------------------------------
>UniRef50_B6IXC3(96-229:551) Pseudouridine synthase n=2 Tax=Alphaproteobacteria RepID=B6IXC3_RHOCS  E=1e-06 s/c=0.41 id=26% cov=62%
--------------------------HKPDGLVTT-ARDEKGRPTVFDNLPPELPRVVSVGRLDLTSEGLLLLTNDGALARHL-ELPVTGWL-RRYRVRVHGAPDEAQ-----------IAKLAQGIIIEGIEYGPIE-TVVDRSVGANTWLTVSLREGRNREVRRVMEHLGLPV--------------------------------------------
>UniRef50_C8P302(57-190:229) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P302_ERYRH  E=1e-06 s/c=0.41 id=31% cov=25%
-----------------YQKDIYFMMNKPAGYIC--EHNPEMYPSVLELIESYHRDLVFVGRLDADTEGLLLI--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1LJQ9(64-200:238) Pseudouridine synthase n=3 Tax=Burkholderiales RepID=Q1LJQ9_RALME   E=1e-06 s/c=0.40 id=21% cov=45%
-----------------------------------------------------------VGRLDHDTTGLLLLTDDGQFIHAQTSP--KKQVPKIYEVTTFDPVTPEQ---------VEALRTGVKLDDEPAPIAADACE-----ATGERSLRLTLLQGKYHQVKRMVAAVG-----------------------------------------------
>UniRef50_C7NDY8(59-191:228) Pseudouridine synthase n=5 Tax=Fusobacteriaceae RepID=C7NDY8_LEPBD   E=1e-06 s/c=0.42 id=17% cov=59%
------------------------ILNKPKRVLC--SNEDKFGRRLAVDFIKSRARLFTYGRLDFMTEGLIIISNDGEVYNHVMHP--RKKLYKSYIAK-----------VSREIEDKDIEALQHGVVIDGKRTAPAKVKKIDKKE-----LRIAIFEGRNRQIRKMLETLGY----------------------------------------------
>UniRef50_B8CBS5(72-207:253) Pseudouridylate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBS5_THAPS  E=2e-06 s/c=0.40 id=24% cov=47%
----------------------------------------------------------PVGRLDKETSGIILMTSDGRLPNAALRGKYKH--PKTYVVKA-----------NRPVANDDIKRLREGVPL-TAPTLPCKVKAVQLSTLDLSsrYLEITLVEGRNRQIRKMLEAIGY----------------------------------------------
>UniRef50_D0SE82(57-195:244) Pseudouridine synthase n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SE82_ACIJO  E=2e-06 s/c=0.39 id=20% cov=63%
-----------------YREKVYIALNKPQGYeCSHQATHHFSVFDLFDDVLLNRG-IQCVGRLDQDTTGLLLLTDDGQFLQALTHP--KKHVAKVYRMKTAD-----------PVTDEQVQQLEQGVELrnEKGSFAATDVKRLAE-----CELQMTVHQGVYHQVKRMLAAVG-----------------------------------------------
>UniRef50_B7VP37(70-207:241) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=B7VP37_VIBSL  E=3e-06 s/c=0.39 id=19% cov=63%
-----------------------ILMHKPAGTIC--SNIDEVYPSLFNYLELEKAsELHIAGRLDADTTGLVLITDDGRWSFNITLP--TKSCKKVYRVILSRD------------IKDDVADKFKAGIQLQGEQKLTRPAELEVITSK--EVLLTITEGKFHQVKRMFAAVGNRVVG------------------------------------------
>UniRef50_UPI00017431E5(1-66:69) tRNA pseudouridine synthase A n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017431E5  E=4e-06 s/c=0.81 id=17% cov=29%
--------------MVIFENEDFFIVNKAEKIPMHKGTGHKYGLSEVFKKIYKSENINFANRIDFETSGLVIGCKT-----------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C9RMB6(88-260:286) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMB6_FIBSS  E=5e-06 s/c=0.31 id=23% cov=65%
--------------------------NKPRGYVTT-ASDEKGRATVMDLFREQYakmfpgkpvPHISPVGRLDAASEGLLLFTNDTQWADALLKTKDERRKtrddkcveresrgpihTKIYRVQVNGHPTAEEL---SQMEAGFNVPPRVFGEPEEFMHAVS--AKLYSAGEKNCWLEITLDEGKNREIRRMLAKLGY----------------------------------------------
>UniRef50_Q57VS4(184-518:638) Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=Q57VS4_9TRYP  E=5e-06 s/c=0.16 id=29% cov=73%
----------------------ILVVHKPAGLPTHASGryfmnsctamleyvlaprrlhawlvekdpllqslvstihlTGRERDELLAYYLTDSMEedtvpierlPRPCHRLDKVTSGVLLLGISKVAARRVGEALMSKtrqmeeilprrsrfesdegtitfdklhmsgaTVRKRYLARVRGCFPENSMKirfencpgdknkegvladsnekdttcpINGGLLIVTKNSHEGRRDATDGmnvktfvnsvgvpvlftsplrqyrfsenetiyedlnesygtpikemfcQDAMTLCQPLRHYQsdhshhkdagtNTESLVHCVPFSGRMHQIRIHLSDWGHPIVGDVTY--------------------------------------
>UniRef50_B1KQS3(41-202:239) Pseudouridine synthase n=20 Tax=Gammaproteobacteria RepID=B1KQS3_SHEWM  E=8e-06 s/c=0.33 id=21% cov=63%
----------------VHENNHIrleggqrltarasryIMLHKPADTLS--SNVDGDHPSVFNFInLEHTSELHIAGRLDADTTGLLLITDDGRWSFNVFNP--KYHCEKVYRVyLRDSIEGEIAGEIDAELKARFKQGLDLQ-----GEQALTLPAKLEFVSPK--EVLLTITEGRYHQ--------------------------------------------------------
>UniRef50_A8FRI1(38-187:218) Pseudouridine synthase n=17 Tax=Bacteria RepID=A8FRI1_SHESH   E=9e-06 s/c=0.35 id=19% cov=47%
-------------------------------------------------------------RLDHDSEGLLLLTTDG----MVSHQVRSKKVEKEYYV-------QVDGDIDDAAILKLQTGVEIGIKGEKYLTLPCKVFKLENEPElpsngrkprdpkhgPMSWVSITIGEGKNRQIRKMTAAAGFP---------------------------------------------
>UniRef50_UPI0000D52F9C(65-201:242) putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase) n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F9C  E=9e-06 s/c=0.38 id=29% cov=23%
----------------------LFVLNKPTGVIC-SKKTEGNLRSIYDLIPKidNEKNLMIVGRLDANSSGLIFF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6GU42(35-177:214) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU42_9BURK  E=2e-05 s/c=0.36 id=23% cov=60%
--------------------------HKPAGYET--SHLPSHNPSVFDLLPKHYIKRGLqaAGRLDVDTTGLLLFSDDGQFIHRliSGKVGTKQEIEKIYEVTGARPFSDLQ-----------LQRLLEGVDLDD-EPEIIYASRATLLADG--RLELGITTGKYHQVKRMVAAVG-----------------------------------------------
>UniRef50_A6LUE3(60-140:281) Pseudouridine synthase n=3 Tax=Clostridium RepID=A6LUE3_CLOB8   E=3e-05 s/c=0.63 id=25% cov=22%
-----------------------IVLNKPVGITC--TAENKVSDNIISYMK-YPHYIFPVGRLDKDSQGLILM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6HUV8(53-194:237) Pseudouridine synthase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUV8_9BACT  E=3e-05 s/c=0.36 id=15% cov=45%
-----------------------------------------------------FGRIRPLGRLDAASAGLLLLTNYQEPWSHFLSP--EGGVRRRYRVK-----------IRPGLRAEDRKLFLSGKAGEGAGYRRVEVE-IEREGPKSSWLLISLVEGRNREIR------------------------------------------------------
>UniRef50_A0PYR9(60-192:229) Pseudouridine synthase n=9 Tax=Clostridium RepID=A0PYR9_CLONN   E=7e-05 s/c=0.38 id=21% cov=22%
-----------------------ILLNKPVGITCTSSKDIKAN---IIDFVNYRDYIFPVGRLDKKSEGLIIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C5CED2(61-190:235) Pseudouridine synthase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CED2_KOSOT  E=7e-05 s/c=0.38 id=19% cov=39%
-----------------------IAMNKPVGYVC--SKSRTEGLSVYDLINEVFsSKLSIAGRLDKNSRGLLLLSNDGNFVHEIISP--RKKIEKEYIVKVEEKILPEQLQI------------------------------------------------------------------------------------------------------------
>UniRef50_Q00UF3(334-427:428) Chromosome 16 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri RepID=Q00UF3_OSTTA  E=7e-05 s/c=0.53 id=26% cov=41%
-------------------------------------------------------RVWAVNRLDAPVSGVWLCATSVKASLKAREWLSKpGTSTKTYLARVSKgsalTTPDGGLRIDAPLWKNAKTSVAElRPESEGGKPCATRIFLLE----------------------------------------------------------------------------
>UniRef50_UPI00006CCA31(240-375:484) conserved hypothetical protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CCA31  E=9e-05 s/c=0.36 id=20% cov=42%
-----------------------------------------------------------VGRLDYNSEGLILLTNDGDIAQCLEQP--ESNIYRQYRVR-----------VQGELDERKLLKLRQGTVINGVQYGPFNVEIDKRQSSN-TWLTVGLYTGKNREIR------------------------------------------------------
>UniRef50_Q54RS0(68-205:571) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RS0_DICDI  E=0.0001 s/c=0.36 id=20% cov=62%
-----------------------IAVHKPSGYICSTVNDHDHKiiyDILPKEFFKRKPTLSIAGRLDKWVTGLVVLSQDGKLVDRIISPKDDG-CGKDYEVVLKDKLVGDEAEV--------FESGKIMLRGESTPCKPAKLQVLDKEKNK---VKVTLYEGRYHQIRRMFAS-------------------------------------------------
>UniRef50_Q0G3T3(245-379:639) Pseudouridine synthase n=4 Tax=Alphaproteobacteria RepID=Q0G3T3_9RHIZ  E=0.0001 s/c=0.36 id=25% cov=23%
----------------------LWLFHKPAGTVTT-NKDPEGRRTVFDMLPEDMPRVLSIGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B6AKQ9(85-232:298) Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AKQ9_9BACT  E=0.0002 s/c=0.33 id=32% cov=23%
------------------------AFNKPRGVLVTRTDPGGRETicesigrSSGQRTGMDMSRLMPVGRLDQASSGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q87BI2(90-231:476) Ribosomal large subunit pseudouridine synthase B n=22 Tax=Bacteria RepID=RLUB_XYLFT  E=0.0003 s/c=0.33 id=21% cov=36%
----------------------VLIYNKPEGEVTTREDPEGRPTVFETLPVLKGARWIAIGRLDINTTGLLLLTTDGELANAMMHP--SSEIEREYVVRVR----------------------------------------------------------------------------------------------------------------------
>UniRef50_C6XHY6(75-198:354) Pseudouridine synthase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHY6_LIBAP  E=0.001 s/c=0.37 id=26% cov=21%
--------------------------HKPIGLVTTHSDPD-GRSTVFDNLPSIFSRVISVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B0TGQ0(107-327:369) Pseudouridine synthase n=44 Tax=Bacteria RepID=B0TGQ0_HELMI   E=1e-59 s/c=1.05 id=33% cov=96%
--------PEDIPLEIIFQDADIAVINKPAGLVVHPAEGHWSGTLVNALLYHikdlsginGELRPGIVHRIDKDTSGLLVVAKNDRAHIHLTEQVKDHRVRREYLAVVHGVIGAETGRVEAPIGRDPKDRQRMAVIA-GGKSAITHFRVLARYPEqGFSLLHCRLETGRTHQIRVHLAHIGHPVAGDPKYGPRKAAFGLTGQALHAWKLEFVHPRSGEPMRFQAdpPEPF
>UniRef50_B8K915(10-227:254) Pseudouridine synthase n=5 Tax=Vibrio RepID=B8K915_VIBPA   E=1e-58 s/c=1.05 id=57% cov=100%
MAMTEYNPPREPWVDIVFEDEHILVANKPSGLLSVPGRLEEHYDSLWSRLVAIYPDIQVVHRLDMDTSGLMLLAKHKEAERSLKKQFQYRLTHKVYYARVWGHPTNDNGEIDLPLICDWPNRPRQIVCFDDGKPSKTLYQVVKRE-ERTSIVRLLPITGRSHQLRVHMQALGHPIVGDEFYSEGEAFEFSDRLELHAAELSFYHPHSEALQCAFVPCDF
>UniRef50_A3MZ33(16-237:237) Pseudouridine synthase n=9 Tax=Proteobacteria RepID=A3MZ33_ACTP2   E=1e-58 s/c=1.03 id=62% cov=100%
MALIEYHPPLEPFLTEVYRDNHILVINKPSGLLSVPGNRPEYYDSAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFRDREPKKHYIALLWGKLGEkvgDTGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHLPNNTTRVKLTPITGRSHQLRVHSLALGHPILGDKFYASPLAKSLSPRLCLHAESLSITHPITGEAMTFTAQTEF
>UniRef50_Q6AJM1(88-313:327) Pseudouridine synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJM1_DESPS  E=1e-57 s/c=1.00 id=36% cov=98%
------LEPQQVDFESIYEDDSLLVLSKPPGIVVHPGNGNTEGTLVHGLLYHCREiggvgdaiRPGIVHRLDKDTSGAMVVAKDERSLRTLVDSFKERQVYKVYHALVCGIPKKYEGRIVAPIGRHSVHRQKMAISERTGKFAATNWQVVEVFEtkdGPYSLLRVHIETGRTHQIRVHMSSIGCPIAGDQVYGSKRQNPAFARQMLHASRLRLPHPVTGRTMSFTAPLwqDF
>UniRef50_A3EQJ0(90-319:339) Pseudouridine synthase n=1 Tax=Leptospirillum rubarum RepID=A3EQJ0_9BACT  E=5e-57 s/c=0.97 id=36% cov=96%
--------PENIRLEILYEDEDLIVISKPPGLVVHPAPGHSSGTLVNGLLFHfqsqgdeqkkgepeeeeeaeRPLRAGLVHRLDQDTSGVMVVGKTESVVLDLMNQFKDRSVSKKYLALVKGILPKKRGEINAPIGRSTHDRKKFTVRQ-DGKPSVTRYRVLETYHENYSLLEVTLLTGRTHQIRVHFRYLGFPLLGDAVYGSKGtENKNFPRQMLHAWKLSFQHPSSNSKMEFEAPLP-
>UniRef50_D1RB31(82-299:319) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB31_9CHLA  E=9e-57 s/c=1.02 id=35% cov=95%
--------PEQIPLNILYEDEHLLIINKPVGMVVHPAPGNWTGTFVNALLYHcgyslsdasvDSIRPGIVHRLDKETSGVLVAAKTLSVQQKLMELFAARQVYKEYWAICLGNPGNC--ELNWPIGRHPIHR-KQMTVREDGKEALTFCETLEV-GNEICLAKLILSTGRTHQIRVHLKHKGHPILGDSIYGSKQVNmrYRAERQMLHARKLAFIHPITQQKIEVEAPLP-
>UniRef50_A7K2Y9(1-223:250) Pseudouridine synthase n=4 Tax=Vibrio RepID=A7K2Y9_VIBSE   E=2e-56 s/c=0.99 id=55% cov=100%
MAMLEYTPPTDPWVDIVFEDDDILAVNKPSGLLSVPGRLAEHYDSMWSRLKEVHPEIQVVHRLDMSTSGLMLLAKNKPSERALKKQFQYRLTHKVYYARVWGHVEPQEGNIDLPLICDWPNRPRQKVCFDDGKPSQTLFQVVKRevhsDGTHTTVVRLLPITGRSHQLRVHLMAIGHAIVGDEFYATEEAYQFSERLELHAAELSFYHPATDQLSSIFVPCDF
>UniRef50_B8CWM0(77-296:308) Pseudouridine synthase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWM0_HALOH  E=1e-55 s/c=0.99 id=37% cov=96%
--------PVEMDLDIIYEDKDILVLNKNAGLVVHPAPGNHENTLVNALIAYcdnlstisGVNRPGIVHRLDKDTSGVMVIAKNDISHRKLVEQFKQRKTKKYYRTLLKGELPYKEGKIDAPIGRDPHDRKKMAVTRKNSKKAVTYFKVLEFFRDH-SYVEVELKTGRTHQIRVHFSYMGFPVVGDSIYGKKRNRLQATRQLLHAYRLGFYHPRNDKWVEYKAslPDDF
>UniRef50_B8J173(75-293:525) Pseudouridine synthase, RluA family n=2 Tax=Desulfovibrio RepID=B8J173_DESDA  E=4e-55 s/c=0.99 id=42% cov=96%
--------PEEGHLELLWQDDHLVVCNKPAGLTVHPCPSCPEQTLVQRLLGRfpqlsrlEGQRPGIVHRLDKDTSGLLVVALTEADCLALAAAFAERQVHKEYLALVSGLP-PLEGQCREPLGRHPTAKIKMAVVPEDqgGRNAFTEWRRLWNTDDGsVSLLAVRIHTGRTHQIRVHMTHLGYPLLGDRLYAPKAVQNMAPRQMLHAWRLGFTHPASGEDMRFTCPPP-
>UniRef50_A8ZXZ8(77-306:329) Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXZ8_DESOH  E=8e-55 s/c=0.93 id=38% cov=95%
--------PEPAPLPLLFEDAFLLVVNKPPGLVVHPAPGHEGG-TLVNRLLHHFPaigtvgepdRPGIVHRLDRNTSGALVVAKTAAAHQALSDMFKSRQVRKTYLALVYGQMKSTGGVVTLPIGRHSLERKKMSVSSPQARPAETRWKVRKAFVD-ASLLELEIHTGRTHQIRVHCTALQRPVVGDPTYPCKWTRKRqhfssrasfellnaAGRQMLHAWRLEFDHPVTGAPMCFTAPL--
>UniRef50_C9LM35(76-292:308) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM35_9FIRM  E=9e-55 s/c=0.99 id=33% cov=95%
---------QNIPLDILYEDNDMIVINKRRGVVVHPGAGNTEGTLVNALLFHcgeqlrsvgDPERPGIVHRLDKDTSGVMVAAKSERAYGILQKEIASHKAQRCYIALVHGQMEGDTGVIRLPLGRSTKDRMKWDVLHETGRPAVTHFHVIEYLP-HYSWIECKLETGRTHQIRVHMAHIRHAVVNDPLYGWKKDHFPIKGQALHSHTLELCHPITGEVMHFEAPVP-
>UniRef50_Q3A0C2(77-306:326) Pseudouridine synthase n=13 Tax=Bacteria RepID=Q3A0C2_PELCD   E=4e-54 s/c=0.93 id=32% cov=96%
---------EDIPLVILYEDRHLIVIDKPPGMVVHPAPGHYQGTLVNALLHHCQDlsgiggelRPGIVHRLDKDTSGVMVATKTDSAHQSLAAQFKAHSITRRYIALIHGVLTGDRGSIDRPIGRHPTHRKKMSTTCRTGRHAVTHWRVLRRFdDDRLTLVELALETGRTHQIRVHFSEQQHPLLGDPVYGGSGRLKTINdpqllkrakalgRQALHARLLGFQHPETGKYLEFSSPLP-
>UniRef50_B8FLB4(79-306:321) Pseudouridine synthase n=2 Tax=Bacteria RepID=B8FLB4_DESAA   E=1e-53 s/c=0.93 id=36% cov=95%
---------QDMDLAILYEDRDIVAVNKPPGMVVHPAPGHSSNTLVNALLAHckdlsgigGVQRPGIVHRLDKETSGVILAAKNDAAHAGLSEQLAQRRVEKFYLALAHGVIKEDTGVIDLPLARHPSDRKRMHVSTPaKGREALSLWTVKERFLD-ATYVKVQIKTGRTHQIRVHLAALHHPVIGDTVYGGRKKRGRLPasvlgkapppeRQMLHAHIVSFTHPVTGEKLTLTAPLP-
>UniRef50_A6C0W7(84-325:342) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W7_9PLAN  E=2e-53 s/c=0.87 id=38% cov=97%
----NRLPPEDIPIDIVYEDDWIAIINKPSDMIVHPGKGNYAG-TLAGALQYHFdqlsdvagqYRPGIVHRLDRNTSGIMVVAKDNQVHAKLSAQFEKRDVQKEYRAIVWGRMEFDTDYIDTFMCVHPRAREKMIVCDEGGnaRNAFTYYEVIERY-QAFTYVRLKPRTGRTHQLRVHMQHIGHSIVADRVYGGHkslkmkslgiqaeadaaelESDVLIERQALHAYCLEFFHPQSGKPMKFEAPLP-
>UniRef50_P50513(74-301:317) Ribosomal large subunit pseudouridine synthase D n=8 Tax=Sphingomonadales RepID=RLUD_ZYMMO  E=2e-53 s/c=0.93 id=36% cov=96%
------NEPQDIPLEIVFEDEHLLVVNKPAGMVVHPAAGNYDNTLVNALLYHcagklsgigGVARPGIVHRIDKDTSGLLVVAKTDPAHAGLAAQFADHSINRRYRAIVDGHPS-LQGHVDAPLARSSVNRQKMAIVSDGrGKRAVTHYRMI-TPLKNASLIECRLETGRTHQVRVHMSSIGHSLLGDPVYGRSKKAHHAllqslafQRQALHAAHLGFIHPISGKQVDFDAEMP-
>UniRef50_D1BAB3(89-306:320) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1BAB3_THEAS  E=2e-53 s/c=0.96 id=36% cov=96%
------LEPQDVPFRVVYQDQDLVVVDKPAGLVVHPAPGHWRGTLVHGLLYRYPdlmelngvKRPGIVHRLDATTSGLMVVARNGLAMEGLVRAFKDRRVGKVYLAMAAGTLR-GEGSVSLPIGRDPDNRKRMACV-PWGREALTRYRVIW-SRGGYSLVACQIKTGRTHQIRVHMRSLGHPLVGDRIYGGPcPEGFPLGRVFLHSWRLEFDHPRTGAPMSFICPLP-
>UniRef50_A5GW76(80-301:316) Pseudouridine synthase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GW76_SYNR3  E=2e-53 s/c=0.95 id=32% cov=97%
-----YLQPEPMDLDVLFEDEHLIVINKPAGLTVHPAPGNKDGTLVNGLLHHCPDlpgisgklRPGIVHRLDKDTTGCIVIAKSQQALVKLQVQIQKRVASREYLAVVHGVPAGESGTIVGAIGRHPVDRKKYAVVsSDNGRYACTHWSLQERLGD-YSLLRFKLDTGRTHQIRVHCAHRNHPVVGDPTYSRcRKLPIELPGQALHAVQLGLDHPITGERMVFEAPLP-
>UniRef50_A4VJG2(39-244:244) Pseudouridine synthase n=18 Tax=Bacteria RepID=A4VJG2_PSEU5   E=4e-53 s/c=1.02 id=51% cov=94%
-------------IQIVHQDAALLVIDKPTLLLSVPGRAEDNRDCLVTRLQEnGYPEARIVHRLDWETSGLIVLARDADSHRELSRQFHDRETEKAYTALCWGQPDADSGSIDLPLRYDPPTKPRHVVDPELGKHALTFWRVLERCGDH-SRVELTPITGRSHQLRVHMLSIGHPLLGDRLYAHEQALRAHERLCLHASMLTLTHPQTGARLRFESPAPF
>UniRef50_D2BIX0(70-288:302) Pseudouridine synthase n=5 Tax=Dehalococcoides RepID=D2BIX0_DEHSV   E=5e-53 s/c=0.95 id=36% cov=95%
-------PPelkaEDIPLEIIFQDKDLLLINKPPGLTVHPAPGHPDHTLINGVLALEPKmedfddplRPGIVHRLDKDTSGLLLVAKNRETLANLSAQFKERTVRKYYLTLVKGELHPAEGFIEAPLGRDPQNRQKIAVV-SNGRHARTGYKVLRYI-QGYSLLEVKLETGRTHQIRVHFAAIGHPVAGDAIYGQKET--WLKRQFLHAHRLSFTLPSNGQTVEFTSPLP-
>UniRef50_C7RM94(102-319:375) Pseudouridine synthase n=11 Tax=Proteobacteria RepID=C7RM94_9PROT   E=9e-53 s/c=0.95 id=38% cov=95%
--------PEEIPLRIVFEDDTLIVLDKQAGLVVHPGSGNWRGTLLNGLLHHapqlaRVPRAGIVHRLDKDTTGLMVVAKTLEAQTDLVRQLQARSVKRCYQALVRGIV-EGAGIVDAPIGRHPTVRTRMAVV-SGGRPARTHYRVLERFV-ACTLIECALETGRTHQIRVHMTSIAHPLVGDPIYGGGASRvpqgAVFPRQALHACRLALVHPASGKAMLWRSgvPAD-
>UniRef50_A4WSV2(85-334:349) Pseudouridine synthase n=41 Tax=Alphaproteobacteria RepID=A4WSV2_RHOS5  E=9e-53 s/c=0.83 id=32% cov=96%
--------PEAIPLSVVWEDADLIVIDKPVGMVVHPAPGQWTGTLVNALLHHcgaslsgigGEKRPGIVHRIDKDTSGLLVVAKTDRAHQGLAAQFEAHTVERRYLALVHGVPEPsdprlrgIRGVSFEPggvlriatgIARHRTDRQRQAVTFEGGRHAVTRARLLERFGTPpaAALVECRLETGRTHQIRVHMSHVGHGLIGDQTYGGRRKlsakavgaeaaqaAEAFPRQALHAATLGFCHPVTGEDLSFESPLP-
>UniRef50_Q1J0S8(92-316:341) Pseudouridine synthase n=7 Tax=Deinococci RepID=Q1J0S8_DEIGD   E=3e-52 s/c=0.92 id=37% cov=95%
--------PEAVPLDVLYEDEHLIAVNKPPGMVTHPAPGVTSGTLVNALLGRltlpeqpgavgpDGYRPGIVHRLDKDTSGVIVVAKTVEAHARLAAAFKDRSTHKTYLAIAAGMWKAQGPVsVNAPVGRHPTARQRMTVGGVGPREAQTLFTPLATHPDGhgrtLALVRAQPHTGRTHQIRVHLAHLGSPILGDAVYG--RASAVMPRHALHAQFLTLPHPVTGETLHLHAPVP-
>UniRef50_Q0F3G2(81-310:325) Possible pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G2_9PROT  E=2e-51 s/c=0.89 id=34% cov=96%
------LEPEDLPLDILFEDEHLIVLNKPAGIVVHPSHGHDHGTLVHALLHHcktlpginGVERPGIVHRLDKDTSGSLVIAKSEVVHQRLSEMFAEHNLNRQYIAWCRGVPSWRVKCIELPIGRHPHQRQKMAV-TDSGRESITDAAVEHIFG-PFSQMRLTLHTGRTHQIRVHMAHENLPVLGDPVYARsyhpgreipepaRHAIATLSRQALHAELLEFDHPISGEPMSFRAPLP-
>UniRef50_O50310(72-308:327) Uncharacterized RNA pseudouridine synthase Cpar_0723 n=13 Tax=Chlorobiaceae RepID=Y723_CHLP8  E=2e-51 s/c=0.86 id=34% cov=96%
--------PEDIPITILYEDDDLMVIDKEAGMVVHPAFGNWTGTLANAILHHLGKdadeldktemRPGIVHRLDKDTSGLIIIAKNPTALHKLARQFANRQVEKVYKAIVWGVPKAESGTIKTNIGRSHKNRKVMAnfpYEGAEGKHAITDYQVVEDLG-YFSLMDVTLHTGRTHQIRVHLQHLGHSILGDETYGGATPRTlpfsksepftrnlleLMSRQALHAQTLRFRQPTTGEPLSFSAPLP-
>UniRef50_C8P3R0(78-294:308) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3R0_ERYRH  E=6e-51 s/c=0.93 id=34% cov=95%
--------PVPMDLDIVYEDDAILVVNKPKGLIVHPSPSTLNQPTLVHGLLAHTtqlsdlngeLRPGIVHRIDKDTTGLLVVAKTNEAHEILVEDLKQRLISREYVAIVHHQFKHQSATVDAPIGRDPKNRQRMAVTDQNSKQAVTHFYLAERFND-FSVLRCKLDTGRTHQIRVHAQYIKHPIVGDQTYSYKNTWET-NGQCLHAQKLTLTHPVSKEVMTFEAELP-
>UniRef50_C8S0A2(94-343:356) Pseudouridine synthase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S0A2_9RHOB  E=7e-51 s/c=0.81 id=33% cov=96%
--------PEDIPLTVVWEDADLIVVDKPVGMVVHPAPGSYTGTLVNALLHHCGdtlsgvggaKRPGIVHRIDKDTSGLLVVAKTDRAHHGLAAQFEAHSVTRHYIALVHGAPNAADPRLRGirgvsfepggivciatNLARHKTDRQRQAVLFDSGRHAVTRVRVLESYGTPpvAALVECWLETGRTHQIRVHMSHAGHALLGDQTYGGRRKVAPkavgeavaqaandFPRQALHAASLGFVHPVSGEELLFTSPLP-
>UniRef50_Q0VQA6(26-229:229) Pseudouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q0VQA6_ALCBS  E=1e-50 s/c=0.99 id=51% cov=93%
----------------IYRDEHLLLINKPAYLLSVPGRAPENKDCAIRRLQQRYPDIRLVHRLDLDTSGIMVFGLTAFAQSKLSRLFQLRTVKKRYQAIVHGLVEKNAGSIDLPLIADWPKRPLQKVCHETGKNALTHYRVLERDiPGNRTRLALSPVTGRSHQLRIHCRELGHPIIGCDMYAPAEIEALSPRLLLHAEWLAFNHPLTGLWQEFTSPCPF
>UniRef50_Q2S3B7(68-328:349) Pseudouridine synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3B7_SALRD  E=3e-50 s/c=0.77 id=35% cov=96%
-------EPEAIPLDVVHEGDDLLVVNKPAGMVVHPAPGHRSGTLVHALLHHVDGgevaadderdevsedevglslvnalpqspdhpvvRPGIVHRLDKGTSGLLVVAKRGRAHQPLAEQFKAHTVDRRYRAIVWGRFAPSDGTIEGAIGRDPHHRQRMAVVPEDeGKWARTHYETVETHA-HTSVVEFELETGRTHQIRVHARAQGHPLLGDPKYGGQRVRYGtqsgtrrtfydqlfetLPHPALHAYRLGFDHPTTEERLRFEADPP-
>UniRef50_Q38W13(78-285:300) Pseudouridine synthase n=4 Tax=Lactobacillus RepID=Q38W13_LACSS   E=4e-50 s/c=0.96 id=32% cov=92%
------------PIKVLYEDDYWLVVNKPAGLATIPGPTN-TTDTLLNRIKGYWQQNgatdlvpHIITRLDFDTSGIVLAAKHQVAQSLLQPQIEQHQLQKFYLAVVAGTGLPEFGTIKAPIGRVGVEPRRR--VIADGQSAWTDYWRLAQD-ERLTVLKVQIHTGRTHQIRVHLSDLDHPLVGDQLYEGPLG-WGIDRQALHAYQLTFNDPFSQQKRQFTAPIP-
>UniRef50_D1PCC3(121-365:387) Pseudouridine synthase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PCC3_9BACT  E=5e-50 s/c=0.81 id=38% cov=96%
--------PEEIAINVVYEDDQLMVVNKEAGMVVHPGAGNFHGTLIqaVAWHLRDMPEFdandpevGLVHRIDKDTSGLLVVAKTPTAKNALGKQFFNKTTHRSYNALVWGNIVEDEGRIEGNIGRDPKNRLRMKVFDPDsgiGKTAVTHYKVLERFG-YTTLVQCVLETGRTHQIRAHMKHIGHPLFMDETYGGTEilrgqrsssykafiqnCFKLCPRQALHAKTLGFVHPTTKQQMDFDSewPNDF
>UniRef50_C0QPR5(80-304:319) Pseudouridine synthase n=4 Tax=Hydrogenothermaceae RepID=C0QPR5_PERMH  E=7e-50 s/c=0.88 id=32% cov=95%
--------PENIPVDILFEDEDIAVVYKPAGMVVHPSPGHTSGTLVNALLYHfrniseygGKERAGIVHRLDKDTAGLMIIAKSEFAHKELQKQFQERTVDKRYIAVVTGIVQNDHGFIDLPIGRSIYNRKKMGTEATNLRDALTEYWVKNRSeKENLTVVDIKLHTGRTHQIRVHFSAIGHPLFNDKVYGFKKSQLRSEKMrsisdqtlyhALLAYRIAFDHPRTGEKIDIT-----
>UniRef50_A5EX53(82-304:322) Pseudouridine synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EX53_DICNV  E=1e-49 s/c=0.89 id=37% cov=95%
---------QNLPLNILYADDDIIVINKPAGLVVHPAVGNHDNTLLNALLYHfpqtkHLPRSGIVHRLDKDTSGAMVIAHSARAHTDLVRQLQNRSMGRIYLALVYGYITAGD-TIDLPIGRHAKDRLKMAV-RPDGKPAITHYRIEERWQT-LTLLRVQLETGRTHQIRVHLSHHRHPLVGDKLYGArpflassltelqRQALAEFPRQALHAVELHLHHPATNEIMRFTAPLP-
>UniRef50_A5VJ18(62-285:301) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VJ18_LACRD  E=1e-49 s/c=0.88 id=33% cov=95%
------LPPEtandnvdvsEAPIDIIYEDQDFLIMNKPAGVATVPAHNVPVADSLVNRVKGYYKRQnyenqvtHVATRLDRDTSGLVVFPKHRFAHAVLDEQLKKHLVKKNYLALIKGKVPAEHGYIDAPIQRDPNSFVKRMVGKE-GKASVTEYWRQECNVQ-ASLIKIRLHTGRTHQIRVHFASLGFPLIGDKMYG--EESGLIARQALHCYWLSFYSPFKGKNITVSAPLP-
>UniRef50_B5YKV0(77-298:315) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV0_THEYD  E=2e-49 s/c=0.89 id=32% cov=95%
--------PQNIPIQVIYKDDYLIVLSKPAGMVVYPCAGHPDGTLMNALAYHVKKlanvgapfRPGIVHRLDKDTSGVMVVALDDETYYKLVEAFKKREIKKEYLALVYGQLR-GSGKITTPVGRAIYDRKKMSIKSKKAKEAITEWEVIKNF-KNYTFLKVKILTGRTHQIRVHFSSIGHPVIGDKTYGRKtyieigNKKIPVSRQMLHAHKIELIHPITEKLLQFEASLP-
>UniRef50_Q0F1Z5(359-579:579) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1Z5_9PROT  E=5e-49 s/c=0.89 id=45% cov=91%
-------------IEIVYEDDQLLVVNKPAGLMSTPGR--EIEESLFSRLAQRYPQIpelTLVHRLDMDTSGLLLVAKDLRTHKRLQKQFIERSVEKCYEAVLVKRLPaqPDQGRIELPLRVDLDDRPRQMVCYQHGKPATTRWQIIARENNRTRIW-FYPETGRTHQLRVHASHrdgLNAAIVGDGLYGLP-----AERLMLHARRLCFTHPVSREPMVFELPAPF
>UniRef50_C9RQF0(71-308:424) Pseudouridine synthase, RluA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQF0_FIBSS  E=5e-49 s/c=0.82 id=35% cov=95%
------LEPEDIPLNIVYEDDDIVVINKPRNLVVHPGNGVSKGTLAAALLYHfkenlstvnGPLRPGIVHRLDKDTPGLMVVAKNDAAHRHLAHQLETRTLHRTYNALVWGCPRDLEGTIDAPIGRNPKNRLKMAVV-KGGKESRTHYVAKQFFAI-ATLLELQLESGRTHQIRVHSRYTGHPVVGDPLYdGRDESLNRVPPLMkpvaekvleiapaqlLQAVKIELIHPRTNKKLTFKVP---
>UniRef50_C5J6Q2(65-294:306) Pseudouridine synthase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6Q2_MYCCR  E=1e-48 s/c=0.85 id=34% cov=95%
--LNNYQEPqlkveaQKVDFEIVYQDNDIIVINKPKNLVVHPGNGNWDKTLVNGLLHEfatnlsdvnGEIRPGIVHRLDKDTSGLLLVAKNNQAHKYLAKQLENHEIERKYIAIVVGKIPHTKMRINLPIGRDNQNRTKKVVSSFNSKNAITNVELINtfvYKNEHFSIVKCILETGRTHQIRVHLSHIGYPIYGDPVYGKKIDDLG---QRLHAYEITFKH-LDGRLMNFK-----
>UniRef50_Q0BWH2(77-325:341) Pseudouridine synthase n=3 Tax=Alphaproteobacteria RepID=Q0BWH2_HYPNA  E=2e-48 s/c=0.78 id=31% cov=96%
---------EAIPLEILFEDAHLVILNKAAGMAVHPAPGSQTGTLVNALLHHCQGqlsgiggveRPGIVHRLDKLTSGVMVAAKTESAHTGLAALFERHDIDRVYRAVTRGAPRPLSGTIEAAIARSESDRKKMSVhrnpDSPAARHAVTHYKAVETFGYKdratrlpaAALLECRLETGRTHQIRVHMAHSGAPLIGDPVYGRQagimawkapgsearydkalAAARAFSRQALHAAVLGFVHPITGETLRYEAPLP-
>UniRef50_A6VZC6(9-212:212) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VZC6_MARMS   E=2e-48 s/c=0.95 id=48% cov=93%
-------------LEILYEDEWFAVINKPANCLSVPGRGPDKLDSILYRAECLFGEAFAIHRLDEATSGLILVAKTHECQKRMYAHFREREVQKEYRALLRGHLLGEKGEVRKPLRCDWPNRPRQIICtDEWSKDSITYWEKMAYE-NNTTRVRLVPFTGRSHQLRVHMQSLGHSIIGDEFYDPEFQND--PRLLLHAYRLEFRHPFTKAWIAFVAACPF
>UniRef50_O31613(62-271:283) Uncharacterized RNA pseudouridine synthase yjbO n=53 Tax=Bacillaceae RepID=YJBO_BACSU  E=2e-48 s/c=0.92 id=34% cov=94%
---------EPVPLDILYEDEHVLVINKQPYVSSIPSREHPSGSIANGIIDHYqttgvRATVHLVTRLDRDTSGIMLVAKHRFAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAPIGRH-PDSIIERTVTPDGQKAVTHFYVTC-ANDDMTSVALQLETGRTHQIRVHMSYLGHPLCGDTLYGGTRQE--IGRQALHSEHLSFIHPLTQENMRFHAPLP-
>UniRef50_D0P480(115-338:363) Ribosomal large subunit pseudouridine synthase A, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P480_PHYIN  E=2e-48 s/c=0.86 id=43% cov=95%
------------PLKILFRDDAVIVVNKPANILSVDGTDPDALMSVHRCVARVYPNARMVHRLDQETSGLLVVALTKSAAQSLNAQFRDRSVDKTYVARVDGWMmndleekSESPRRVQIPMEKHLTKSLIQHVVSDREVdpssslWSTTEYSVLSRDESGddrkSTLVELKPVTGKTHQLRLHMQHLGHPILGDSLYSPDVVYHRASRLCLHAAKLSFTHPVTNERLTFESPCP-
>UniRef50_C0Z877(92-298:310) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z877_BREBN  E=2e-48 s/c=0.93 id=34% cov=93%
-----------PSIDILYEDDHLLIANKPAGMMVHPikqeTDTLVHALAAVLAARGEQTSVHPVHRLDKDTSGAILVAKSSYGHQLADRLLREGGIHREYLAVASGVLSEGAGTIDAPIGRDARHPTKRRVV-ESGDPAITHYEVQQTSEE-MTLARVWLETGRTHQIRVHFAHIGHPLAGDTMYGG--ARGLLRRQALHASKLSFLHPLLEKEIVVEAPIP-
>UniRef50_A8RHQ2(64-276:287) Pseudouridine synthase n=2 Tax=Clostridium RepID=A8RHQ2_9CLOT   E=4e-48 s/c=0.91 id=32% cov=93%
--------PVKLPLSIVYEDEDILVINKDAGVPIHPSQG-HYDNTLANAVSWYFHEkgeaftYRVINRLDRDTTGLLVLARHMLSACILSEQMTGRRIRREYRAIVLGH-TPEEGTVDSPIARAEGSTIERRVDHETGERAVTHFRTLLYNEEKdLSLVSLSLETGRTHQIRVHMRSIGHPLPGDFLYCPDY--RYIDRQPLHSYLLRFEHPITGKEMEFTA----
>UniRef50_C8PT91(74-309:326) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PT91_9SPIO  E=6e-48 s/c=0.81 id=33% cov=96%
--------PEHIPLQILYEDNDVIAVNKRVGMVTHPAAGNWTGTLVQALAYYRLHtspihdkfaglleaeqgrgnfedllRAGIVHRLDKDTSGVLITARSAAAEAFLKDEFKMRRTEKYYAAILNGVPEKRTGVIETSVFRDEHSRIRFTASADlaKGKYARSRYKVLRVYG-RYALVLFKIDTGRTHQIRLHARFIGCPIVGDPLYGKKEAEWKPYGMMLHAYRLCVALPSTREKTVFTAPLP-
>UniRef50_Q31NG5(328-543:543) Pseudouridine synthase n=2 Tax=Synechococcus elongatus RepID=Q31NG5_SYNE7  E=1e-47 s/c=0.88 id=41% cov=95%
------LPPssdEPLELPILYEDADLLAIIKPAGLLSVPGTRGLQQASAIQLLRQQFPDlptYCVVHRLDQATSGILLVARNRPTQVALFEQFRRRQVHKVYEALLEGQPDCTAGTIDLPLRPDWTRRPYQLVDRDRGRPALTYYRCIDQTGDRC-RMELEPITGRTHQLRVHMAHpegLGQPILGDDLYGQS-----SDRLYLHARSIRFRHPSQLDWIQLTTDTPF
>UniRef50_A5IBH6(78-308:321) Pseudouridine synthase n=6 Tax=Legionella RepID=A5IBH6_LEGPC   E=1e-47 s/c=0.83 id=33% cov=97%
----NLCKPENIPIQIIYEDSEVIVVNKPAGLVVHPGAGNKEHTLVNALLHHCpelqlLPRAGIIHRLDKDTTGLLIVAKNLISHTSLIRQMQNREIKRHYLTLVHGYV-ISGGTIDTGFGRHPKNRLKMAV-TDFGRQAVTHYNINKHYKD-FTLLNVSLMTGRTHQIRVHMNYINHPVVGDQLYGGRmkfppnadeailSVLKQFKRQALHACSISFCHPVKNTEITLNAllPDDF
>UniRef50_C0GNZ6(76-308:535) Pseudouridine synthase, RluA family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNZ6_9DELT  E=1e-47 s/c=0.82 id=36% cov=97%
------LEPVAGKLDIVYMDREMVVLNKPAGLSVHPSSSDPAPTLVHyllyacpgLRLMTDRQRPGIVHRLDKDTTGLMVAALNQEAKEDLAGQFAGRRVHKTYLALVCGALKQDEGIINVPLARDQQSRARVAPSRE-GRSARTAYKVLKRDPSGlWSLVQVQIFTGRTHQIRVHFSHLNHPVLGDRIYGGTDWDRFgwkkrflsrlAKRQLLHSSCLGIMHPVSRQWLEFISrpPRDF
>UniRef50_B6BNM7(75-292:325) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNM7_9PROT  E=3e-47 s/c=0.87 id=31% cov=93%
--------------EILYEDDDVLVINKPSGVTVHPAPSVK-EATLVDWLKHkgirlsnisGEERHGIVHRLDKGTSGTMVVAKNNEAHEFLSEQLQDKSMGRYYLAVLNPPLKDEITTIEQNIGRSAHNRLKMTCTDAGkSKYAKTMFKVLSLSNDeKQQFVACKLFTGRTHQIRVHLESINRHIIGDHIYALSPKAEKSERILLHAYMIYFVHPTSKEKLTFVAPLD-
>UniRef50_D0J9U5(63-317:344) Pseudouridine synthase n=2 Tax=Blattabacterium RepID=D0J9U5_BLASP   E=3e-47 s/c=0.75 id=32% cov=97%
-----YYPPildseykniiaENIPLNILYEDEDILVINKAAGMVVHPGFGNEKG-TLIHGIKYHFKNNHqlyrlgLVHRIDKDTTGLLVLAKNEYAQKYLFQQFISKTIQRKYLALVWGNIQKQEGTISGFIGRDPNNRKRMTLFQRNfyrSRYSVTHYKVLERF-KYLTYVSCNLETGKTHQIRVHFKYLGHPLFNDSTYGGdkifmkkylskksidffKDSLNLLKRQALHAGSLSFIHPK-NRKCHFTCsiPEDF
>UniRef50_C8NZX3(70-285:298) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZX3_ERYRH  E=4e-47 s/c=0.88 id=31% cov=96%
-------EPVKMDIDVVYEDEYLLVVNKPRGLVVHPGNGVKSDTLLHGLLYYlnsncdHYIRPGLVHRIDRNTSGLLVIAKDDKTHQFLAEQLLDKTMNRTYYALVHGVLPQAHVLIDAPIGPDKSNTKIMTVNQARSKPARTHFEKIETY-INSSLICCKLETGRTHQIRVHALHANIPLHGDPQYGHPSDTDKT-GQYLCAARLEFVHPKYLKLMQFEIPLP-
>UniRef50_B7GEZ0(91-302:315) Pseudouridine synthase n=7 Tax=Bacillaceae RepID=B7GEZ0_ANOFW   E=6e-47 s/c=0.89 id=32% cov=94%
--------PTYVPLHIVFEDDHVLVVNKRAHMDVHPTQ-PGQTNTLANAVAFHFQCEgiyskvRHIHRLDRDTSGVILFAKHALAGAILDQYLAKRTIRRTYIALVHGYVKQKKGTIEAPIGRDRHHPTRRRV-SKTGDTAITHYERLQYDKqKHVSLVRLTLDTGRTHQIRVHMSYIGHPLVGDTLYGGK---PWIDRQALHAFSLSFLHPFTEELITCSALPD-
>UniRef50_B0K860(69-275:285) Pseudouridine synthase n=11 Tax=Thermoanaerobacterales RepID=B0K860_THEP3  E=7e-47 s/c=0.91 id=33% cov=92%
--------PEKLDLDICYEDEEILIVNKPANMVVHPTKRYQSG-TLANGVAWYFKEkglkalIRPVNRLDRGTSGLVVFAKRPFMQYYLQII---KPMTKLYFAVVEGKM-EGEGRIDLPISR-KPQSGIERMVSEEGDRAITNYKVVK-SSKRFSLLKVKIETGRTHQIRVHLSHIGHPIVGDTLYGS--SDDYIKRQALHAYRLTFVHPLEEKSISVYSPLP-
>UniRef50_Q03WF6(90-290:312) Pseudouridine synthase n=9 Tax=Firmicutes RepID=Q03WF6_LEUMM   E=1e-46 s/c=0.94 id=32% cov=88%
------------------------VVNKPQGMVVHPAAGHSSGTLVNALLHHsplstinGEFRPGIVHRIDRDTSGLLMVAKNDKAHRSLSEQLKSHKNQRVYYALVRGEFTEDSGTIEAPIGRHKIDRKKQAVI-EGGREAVTHFRVLKRYV-GYTLLKVSLETGRTHQIRVHMSYIGHPVVGDPVYGTAQKLDGtqLNGQLLHAKTLTLEQPTTGDELSFDSPLP-
>UniRef50_Q7NBQ4(73-289:312) Pseudouridine synthase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NBQ4_MYCGA  E=2e-46 s/c=0.86 id=29% cov=93%
-------------LDIVYEDDDLIIVNKPTNMLSHPTT-HNEPDTLLNCLMYHNKKQkvYLAHRLDKDTTGLIVATKNFKALEKIQEQITKRIMKRYYLAIVHYPFNELRAVIDAPIGYLKDHDLKFGVEnTKNPKNAITKIYVLDQNKK-YALIKCELLTGRTHQIRVHMDFIKHNIINDPLYGVKGEQRTDYKQFLHAYQLELTHPTTNVSLFFEVKPD-
>UniRef50_B5ZBC1(74-288:299) RluA n=15 Tax=Ureaplasma RepID=B5ZBC1_UREU1   E=3e-46 s/c=0.87 id=31% cov=95%
--------PFACPLEIVFEDQDLLVINKPSGMLVHPTSFQEQ-NTLANALKHYLKtdDFYITHRLDKNTSGLIVICKNQKALCCLQQQFMQKTVKKSYYAIVHNRFDMHhlHFMINEPIGHSYQDKLRMKTgDAKNVKEAISIVKVIEQY-QNTALVEVSIITGRTHQIRVHMRHINHPIYNDPLYGISKHTTPYE-QYLHSFYISFIHPSTNEIVEFKTlmPNEF
>UniRef50_C7GZU4(96-319:331) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZU4_9FIRM  E=4e-46 s/c=0.83 id=33% cov=97%
-----YNANEEGILKigILYEDDYIIVVDKPAGLLTHAKGDKSCECTLSDKILEYTEgslangsganRPGVVHRLDRGTCGVMVMAKTDTALKHLTEAFEKQEVSKEYEAIVYDNIVRDSGVITAKIERNKKNRLKMSAGDE-GREAHTEFKVIERFGK-FTYVSLVIKSGRTHQIRVHMNYIHHPVLGDMLYGKRKDKFNLMWPMLRSKKIGFLHPITSEKMEFTAAMPY
>UniRef50_D2RJW8(67-274:285) Pseudouridine synthase, RluA family n=2 Tax=Acidaminococcus RepID=D2RJW8_ACIFE  E=5e-46 s/c=0.89 id=31% cov=93%
------LEPEEAPLSILEETELYLAVDKPAGLVTH-NAGKERTPALSRRVAWYFQTHhissavHPVSRLDRETSGVVLFAKNACLH----HMLSRNRLEKTYLALTLGHWEQPAGILDWPIGR-RPGSIVERQVDPDGQPARTRYQVLG-EKEGLSLVRFQLETGRTHQIRVHAAAAGHPLLGDTLYGTPGAPG---RHYLHAWKVAFREPFTGRPVEITAPLP-
>UniRef50_Q3AD19(66-283:301) Ribosomal large subunit pseudouridine synthase, RluA family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD19_CARHZ  E=1e-45 s/c=0.85 id=30% cov=95%
------LPPavqsQNAPVKVLYEDDYLIVIDKPAGVLAHPVK-NHFAPSMQELTLSYYRDkgrifegFYPIYRLDRNTSGPMLIAKFSLIAEMLNNSLRKRQINKIYLALIEGPLADKSGIINLPLGLLEGSIIKRAVV-PGGQPACTKYQTVKAFPTHT-LLKVELLTGRTHQIRAHFAAIGHPLAGDDLYGGKM--DLIERQALHLYYISFPHPITKKTISLYAPLP-
>UniRef50_B0PDX0(75-281:292) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX0_9FIRM  E=2e-45 s/c=0.89 id=33% cov=93%
-------EPCEIPVEILYEDSDVIVYNKPAAMACHPVRGLRQGTLANVFARdcaanGESCACRLVGRLDRDTSGAVVIAKNARAAAVLT-----GHVEKQYIALVTGMPNPKHGVIDAPIGQPDRKNPRRMIVA-NGKPAVTEYETQIR-CEGYSVVHCVLRTGRTHQIRVHMASIGCPLLGDTLYGGETER--IERQALHCMQASFIHPVDKRLCIVHAPIP-
>UniRef50_B0TDX6(78-304:339) Pseudouridine synthase, rlua family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDX6_HELMI  E=5e-45 s/c=0.80 id=29% cov=95%
--------PVAMELKVLYEDADLLILDKPPGIEVHpPEQRARFRPTLAHGVAHYFaekgikARVRPLHRLDKDTTGICVFAKNAFAHQALDRQLRNGSLQRGYLAILRGLPAELVGVIDAPIGRDPEHHMR-RMVRDDGERAITRYRVTQViepsglemkgaaeSEGHWALAEVILETGRTHQIRVHFRHLGTPLLGDRLYGGDSPR--IDRQALHSAWVTLLQPRSGEAVKVTAELP-
>UniRef50_A9GIV4(104-337:350) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIV4_SORC5  E=3e-44 s/c=0.77 id=35% cov=95%
---------PDTPIPVLHEDDALLAIDKPAGLPVHPTARYHKSTVIkMMEAARPGERLFLAHRLDRETSGVLLLCRTPEADRTVKAQFEERTgVVKRYAAIAWGWPERDTFRVELPLELDDASRYKVKMRVAppgRGLASATACEVLGRRADpltgrRYALVRCTLETGRQHQIRVHLAASGLPLVGDKLYGPDEGMFargadgvltdddrralELDRHALHAALLELTHPMTGERVRIEAPL--
>UniRef50_Q04XF3(77-295:312) Pseudouridylate synthase, 23S RNA-specific n=4 Tax=Leptospira RepID=Q04XF3_LEPBL  E=3e-44 s/c=0.82 id=27% cov=94%
------LEPIPMTLPVVLEREDYLIIHKPPGIASHSGPGDRSPSLVNGLLHHfkelskvgGEARPGIVHRLDKPTEGLMLIAKNDRAHGKLSELFRKREIEKKYYAWIQGHLPAETGTIDLPIARHPIERLKMTV-SPKGRKSVTHYKVLKYvnsrSGRKFSFVEVGLETGRTHQIRIHFQSQRCPVVGDLLYSRTGSQFESYGLQLLSYYLKFKDPFTGEMIE-------
>UniRef50_A5INM9(80-281:304) Pseudouridine synthase n=7 Tax=Thermotogaceae RepID=A5INM9_THEP1   E=5e-44 s/c=0.89 id=31% cov=89%
--------PVPMKLDVLYEGKHYLVLNKPPNIAIHPGKGVHVATLIEGLLHYGQEKgfsPFLVHRLDKDTSGLLVVAKDREAARILTELFKDRNIEKEYVTLVRGTPENNMKI----------------TIPLDGQEAISEIVSVKSLRD-VSLLRVKIHTGRKHQIRRHLSQIGFPVVGDDTYGDRhfnrefRKRYGLKRLFLHSYRMKFIDPWTEEEKDFRAPLP-
>UniRef50_Q037L4(68-276:293) Ribosomal large subunit pseudouridine synthase D n=8 Tax=Lactobacillus RepID=Q037L4_LACC3  E=3e-43 s/c=0.85 id=33% cov=93%
--------PEFAPLEVIYEDANWLIVSKPAGLTSVPGP-HTPNSSLLNRIAGYLveqkidaPQPAIMTRLDRDTVGLVLAAKHPYAQGRF-DQAHQRTLTKHYLAVVSGKLPSPKGEIDAPL--KLAADGIHRIVAADGQTALTKYRVLKEKTN--TLVDVQLLTGRTHQIRVHFASLGHPLIGDHLYGQPDAR--IPYQALQATRLKFTDPFSEKRITAELPVP-
>UniRef50_B0SGK3(76-298:312) Pseudouridylate synthase, 23S RNA-specific n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SGK3_LEPBA  E=6e-43 s/c=0.79 id=31% cov=96%
------LEPIAMDIPVLYDEDEFMVIHKKAGIACHSGPGDDSPSLVNGLLYQfknlsgtgGERRPGIVHRLDKPTEGVLIIAKTDRAHAALSKLFQDRLVEKTYYAWVLQAPVEAEGTINMPIGRHPVERVKMCV-REDGRMAITHYKtekiVQTQTGRKFSLMKLGLETGRTHQIRVHMAKVGCPVVGDSLYSRSAKDYTQYGLLLFAKKLDFPHPfVPDKRIVVE--LDF
>UniRef50_A3HSB5(1-217:237) Pseudouridine synthase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSB5_9SPHI  E=6e-43 s/c=0.81 id=33% cov=93%
-------------LPILFEDDSIIAINKPAGLLVHRTSIAAQETVFALQILRDqiGMHVHPVHRLDRPTSGILLFAKKEEILPHLKNLFSERQIKKNYLTIVRGIPEQKKALIDHPLKSERSGRLqeaqtWYKVISETEIPFDTTGR---YPTSRYSLLSVNPETGRTHQIRRHLAHIRHYIIGDKKHGDNKQNIFFQNQFglenllLHAIRLSFNHPITEETIEISCPVP-
>UniRef50_Q03H72(74-288:296) Pseudouridine synthase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03H72_PEDPA  E=2e-42 s/c=0.81 id=32% cov=95%
------LPPFDPDFTqapiILYENSDLMVVNKPTGVKTHANQPHELG-SMMNFLQAYFKdtenEAYNVHRLDQFTSGALLVAKNPVVVPILNRQISTKVINRTYLCVVSGHLEQSKGTINVPIGFDPDDKRKRQINGLNPLSAITHYQVLAQY-ENSSLIQVDLETGRTHQIRVHLSYLGHPIIGDPLYNLDNTQ---QPMLLHSWKIRFPLPFNLETIEVTAPIP-
>UniRef50_Q1WS68(74-289:304) Pseudouridine synthase n=2 Tax=Lactobacillus salivarius RepID=Q1WS68_LACS1  E=3e-42 s/c=0.80 id=34% cov=96%
-ATSNYIVDKGRKIPIIFENDDLLVVNKPQGIKSHPNQPYETGTLVNYiagYLDARDEHPYMVHRLDMLTSGAMIVAKNPVVVPILTRLISTHTIKRDYLAITEGIFDQKEGVIDLPIGKDENDKRKRKVDGIGALPARTRYQVIKEF-ENNSVVYLRLETGRTHQLRVHLSAMGHPIVGDVLYNHVSEE---KHMMLHGYKQKLTLPFSMRELELKA----
>UniRef50_B1MWE1(87-300:306) Pseudouridine synthase n=3 Tax=Leuconostoc RepID=B1MWE1_LEUCK   E=4e-42 s/c=0.81 id=31% cov=92%
-------------LDIIFENDDLVVVNKPAGMKMHP-HSPSETDTLLNFLAANFSKRHLysagaiakpymVHRIDRETSGAVIVAKNPVVVPILNRMLKEKVIQRTYLAWVQGILLKNSGTIDRPIGRDISKPFQRQVNGVQAQHAKTHWFKIHTVFQNT-LLRLQLDTGRMHQIRVHLASINHPIVGDSLYG---QRLNQQRMMLHAMSLTLPLPFDGPKRIITTslPSDF
>UniRef50_A5WHV7(32-237:237) Pseudouridine synthase n=3 Tax=Psychrobacter RepID=A5WHV7_PSYWF   E=4e-42 s/c=0.84 id=41% cov=92%
----------------VYEDEDLLLVDKPAGLLSIDGKDLK--VSLLSRLERANPEVKLIHRLDMDTSGLMIFAKNKQAQTHISKQFIERIPQKEYQAIVQGTLaiPGKKGEINIPVRYEPSIKPKHVADPEWKKHALTHYEVLHhelRKGRPVTRVALHPVTGRSHQLRVHMVHLGHVIIGDPIYAEGEALSLAPRLNLHAHKLRLKHPTMNTWMAWESAVPF
>UniRef50_C9M5C8(48-259:276) Pseudouridine synthase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5C8_9BACT  E=1e-41 s/c=0.81 id=38% cov=91%
------------PLDVLYRSDSVLVINKPAGLLSQPDTKGEDSVATRALGYASDPAFGaqLVHRLDRNTSGVMILALDGQALRSLMVCFKERTANKTYLALVSGQLPP-SGQIDAPLLKDPD--KKLVRVASNGERAVTRFRRLATDGQ-FSLAEVEILTGRTHQIRVHMNHIGHPILGDAKYGDFSAKPQVRRLgirrpMLHATCLVVNSPddclkeISGRR--FDAPL--
>UniRef50_Q7UQ77(28-241:256) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodopirellula baltica RepID=Q7UQ77_RHOBA  E=1e-41 s/c=0.80 id=35% cov=92%
--------------DVIYEDNHLLVVNKPTKLATMGAAGQPTLHSLgCDYIRRTCNKPnkvylGIVSRLDSMTSGVIVMARTSKAASRLTPQFANHSgdgAKKTYLAVVSGRVEQQQGTLVDDVYKDDaaHRMRVAHHSRSDAKEARLEYEVLGCDRE-LTLLMVKPLTGRKHQIRLQWAEVGFPILGDTKYGS--ERSWPTGIALHSWRLSIMHPTKKERMTFEAPIP-
>UniRef50_A6VXE8(1-223:242) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VXE8_MARMS   E=2e-41 s/c=0.77 id=33% cov=92%
-------------LDILFQDEHLVAVNKPAGLLVHRTNLaKDEEDAVVQRLRDQTGKWvFPVHRLDRGTSGVLVMAFSPEVARRLSTQFAESKTQKTYHCLVRGYCNE-SGVINYPLAKLNEQKGRSRFKIEGtEREAETGFTRLiqyqlpvpvsRYDSMRLSWLEVTPKQGRKHQIRRHFKHHLNPLVGDSCYGCRHINKVAKelwsedfRLMLHASSLEFNHPITNQPITLKA----
>UniRef50_Q5ZT70(90-298:317) Pseudouridine synthase n=5 Tax=Legionella RepID=Q5ZT70_LEGPH   E=4e-41 s/c=0.81 id=29% cov=92%
--------------SIIFEDSSLLVINKPAGIAVHGGSGLSLGVIEALRkTRHDLSYLELVHRLDRETSGCLLLAKKRSTLRAIQALLEAREVQKIYWALLTHRWDgKKKITITAPLEKNTLKSGERVVsVQKDGKASETDFKLLENY-HQACWVEASPKTGRTHQIRVHSAYFGHVIVGDEKYGAKVGEvegidYQQNRLYLHARSIQFN--LNGVMHVFQADVD-
>UniRef50_B1H073(5-226:238) Ribosomal large subunit pseudouridine synthase C n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H073_UNCTG  E=7e-41 s/c=0.76 id=35% cov=92%
-------------IEIIYQDENILVVNKPSGMFVIPGRNIYENKTLVEILRNQLKQKlWVVHIIDRDASGVLVFAKNPETHRNISVQFENSKIRKKYIALLSGVLEENEGTINKPLI----ISGKNVRIDITGKESITDFKVLENFR-SYTLVNALPLTVKRHQIRIHFWSLGHPLAIDGEYGtldpiflssfkrgykikkGKTENPLISRLTLHAAALTLILPGSGEEKTFEAALakDF
>UniRef50_C3XLR7(88-316:353) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XLR7_9HELI   E=8e-41 s/c=0.73 id=29% cov=95%
---------QDLNIPIIYEDSDLLILNKPANLIVHRIDENDTQFTLVDYLKQkgfalsnlgDSYRLGIVHRLDKNTSGAIVIAKNNATHAHLSMQIKSKQMGRYYLCI-INQPLKNPQTVEIPIMRHPKQRLKYITTTNnvNAKTAKTAFFMIPTLLDSNflktenpkkeipTLIGAKLFTGRTHQIRVHLNSINRHILGDGFYGYKGNYTG--RILLHAHFLHLIHPKTQKLLEFHAPIP-
>UniRef50_B3QB01(219-429:455) Pseudouridine synthase n=3 Tax=Rhodopseudomonas palustris RepID=B3QB01_RHOPT  E=9e-41 s/c=0.80 id=36% cov=92%
----------------LFEDADVLVLNKPAGLAVQGGSGtTRHIDQMLEVLRdAKGQKPRLVHRIDKETAGCLLVAKTRFAATALTGSFRHRSARKIYWALVAGVPKPKQGRISTYLAKEESEDDSIMRVAKHGDDgashAVTYYAVVETSGQKLAWVSLKPVTGRTHQLRAHMAHIGHAIVGDPKYFNIEnwqlPGGLQNRLHLLARRIVIPHPRGG-VIDVSAPLP-
>UniRef50_D0MHX3(3-215:242) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHX3_RHOM4  E=9e-41 s/c=0.79 id=34% cov=95%
---------EVAELPVLYLDNHLLVINKPSGLRSQGDRSGAPTVLSLgkALIKERFNKPgnvylGLVHRLDAPVSGVMVLARTSKAAARLMQQFRERTVEKVYLALVEGEL-EGSGTWEDFIAPARDHMRLVPEDHPFGKRAVLHWQALMT-RNGLTLMRLVPETGRKHQIRVQLAFRGYPILGDRRYRARRWLAPGQ-MALHAWKLALTHPTRRERMQWTAPVP-
>UniRef50_P0A5T2(75-294:308) Uncharacterized RNA pseudouridine synthase Rv1540/MT1592 n=131 Tax=Actinobacteria (class) RepID=Y1540_MYCTU  E=2e-40 s/c=0.76 id=35% cov=92%
-------------MTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAGYrittsgvhERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPDPSSGTIDAPIGRHRGHEWKFAI-TKNGRHSLTHYDTLEAFV-AASLLDVHLETGRTHQIRVHFAALHHPCCGDLVYGADPklaKRLGLDRQWLHARSLAFAHPADGRRVEIVSP---
>UniRef50_A1AVB5(89-293:303) Pseudouridine synthase n=2 Tax=sulfur-oxidizing symbionts RepID=A1AVB5_RUTMC  E=2e-40 s/c=0.81 id=31% cov=90%
----------------LYEDKGLLIINKPSGLSVHSGSGVDVGIIEALR-QIYKKPIELVHRLDRATSGVLLIAKKRSVLKNLHEQLSQHTVEKRYTALVKGVWSKKCHTIDAPLYQNS----RYIMVDAKGKYAISHFQPLKNFSDGgfsASLVEISIETGRTHQIRVHAKYAGHALACDDKYGDKEfdrqvKFKGLKRLFLHAHQFIFTNPLTNDIQKVNASLP-
>UniRef50_C8P137(63-274:291) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P137_ERYRH  E=3e-40 s/c=0.79 id=35% cov=92%
---------RDTPLQILYEDKDILVVDKPYKLLTVSNRKEEELTAF--RLASDYvkkqdskNRIFVVHRLDQDTSGVLMFAKSEYVKRLYQDKWSELVDERLYVAIVEGVVPKDKDVIRSFLRQNKTT---HMYSTSSGQEAITNYEVIKRTENNT-ILKIQIDTGRKNQIRVHMNDIGHPIIGDKKYDAKTN--PLKRLGLHAYRLRVMNPKTKKMMTFVSPLP-
>UniRef50_B0PEI9(101-304:338) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0PEI9_9FIRM   E=3e-40 s/c=0.82 id=29% cov=86%
-------------IDIIYEDENILLVNKPAGLVVH-EDEHQSSDTLINRIQHHLYNCGvynpaeensfapaLCNRIDRNTAGIVIAAKNAAALRILNEKIKARELQKLYLCIVHGTMPKESDTLKAFLRKDARTNTVAVYDHpiPDGRTILTHYRVVAQ-KDRLSLLEIDLLTGRTHQIRAHLAHIGHPLLGDAKYGRNRDNhkTGLKHQALCAYKLTF-----------------
>UniRef50_A6DCZ8(63-274:293) Pseudouridine synthase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCZ8_9PROT  E=4e-40 s/c=0.78 id=33% cov=89%
-------EPNGYGLKPIFETDHFAIFDKPSGVAIHPKKLANTKSLLDDVRLLYGNDANLVHRLDKETSGLVIASKNKFAESILKQAFQNKEIQKKYLALIKGHLDKEI-TIKKPIAVNKDENIKVKVIISDeGKESITLVKPIKKIGKNT-LVECIPLTGRQHQIRIHLYSIGHPIVGDPLYGvdnefadkylkklvdenERIQKTGANRLMLHAYKLEFE----------------
>UniRef50_C0WQT7(80-290:302) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=C0WQT7_LACBU   E=5e-40 s/c=0.79 id=30% cov=95%
------LPDSAATLKILYEDANLIVINKRRGNKTHPNQPGEVGATinhLAAYLKTKEALPYMVHRLDQETSGAILFAKNPAVVPTLVAKIATKNIKRTYLAWVVGTDIDSQGIIDFPIGLDPNDKRKRMIDGNHPAKSITHYTVLQ-KEDGYSLLAVQLETGRTHQIRVHLTAIGHPLVGDPLYNPDDKHPF---LLLHSWKLNIPLPFSEQVIEITAPLP-
>UniRef50_D1VZE9(82-287:315) Pseudouridine synthase, RluA family n=2 Tax=Prevotella RepID=D1VZE9_9BACT  E=6e-40 s/c=0.81 id=28% cov=92%
--------------KIVYEDRYLVVIEKQAGILSMAAGHAslNVKKVLDSYFKQSKQKCtaHVVHRLDRDTSGLMIYAKDIQTAQLLEHDWHHNVYDRRYVAVVSGEMEQDEGTIANWLKDNRAYITYSSPEDNGGKFAVTHFHTLNRTTEH-SLVEYRLETGRKNQIRVHSADMGHPVCGDHKYGNGDN--PIGRLCLHAYVLCFYHPVTHRPMEFETPIP-
>UniRef50_Q5LC96(79-295:305) Pseudouridine synthase n=29 Tax=Bacteroides RepID=Q5LC96_BACFN   E=8e-40 s/c=0.76 id=32% cov=94%
---------RHPLLKIVYEDAYIIVVEKKEGLLSVGTERQKERTAqhiLSEYVGRsgRGNRIYVVHRLDRDTSGLMMFAKDEKTQYTLRDHWHDIVTDRRYVAVVTGEMEKDSDTVVSWLT-DRTLYVSSSSYDDGGSKSITHYRTIKR-ANGYSLVELRLETGRKNQIRVHMQDLGHPLIGDGRYGIDGGPNPLGRLALHAFKLCFYHPVTDQLMEFETP---
>UniRef50_B0RLZ1(10-233:258) Pseudouridine synthase n=13 Tax=Xanthomonadaceae RepID=B0RLZ1_XANCB   E=9e-40 s/c=0.74 id=32% cov=97%
------NPPVSTspdPLQILYQDAVLAVVDKPAGLMVHDSKLARGEDDfLADRLRVQLGRPiFLVHRLDRATSGCLLLAFDRDTASALGKALMAGEVEKDYLAICRGWPAEERFIVDHDLDGGPGKPIKKPAVTHFQRLATGELEIpsTGFATSRYALLRCQPQTGRFRQIRRHLKHLSHHMIGDTSHGDGRHNRsfrmlGIHRMLLHAERLGFPHPADGRRISVVAPLD-
>UniRef50_C6LHC3(96-334:342) Ribosomal large subunit pseudouridine synthase, RluD family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHC3_9FIRM  E=2e-39 s/c=0.69 id=30% cov=95%
--------PEKHPLHILYEDEDLICVWKEAGMVLHPAHG-HYSDSLANYLQGYLagkggqEQVRGIGRLDKDTSGIVVFARNRIAAARLWQQRQSGRFQKEYVALCEGVFPdeayEREQTIDAPIQKVTGEKNKMCIVQERccpaaGCFAVTHYRAISEKescfheamrllsagdlpgPEQASLVRLHLETGRTHQIRVHMAYIGHPLVGDAVYGRGIAGQTCAK--LCAWRARLVQPFTGETILLCPPA--
>UniRef50_A9NFY2(72-277:277) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY2_ACHLI  E=4e-39 s/c=0.79 id=30% cov=93%
---------EDVELDIIYEDDDIVIVNKPFNVIVHddGASEDHLTRRVNMHFQYHGYHHQvlPAHRIDKETTGIVVFAKHFIALAYLSNLFESRQVVKNYICVVENKVKDKTGSIESKLIKD--SKLQKMVVSPHGKLAITHYELLGYEATR-SRLKVQIETGRTHQIRAHMASINHPVVGDILYG-----VSSSRLLLHFSEISFPMIRTKKVEHFVSNPPF
>UniRef50_Q057H9(82-300:321) Pseudouridine synthase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057H9_BUCCC  E=5e-39 s/c=0.74 id=33% cov=91%
---------ENIFLNIIFEDSEILIINKPTNFVVHLGYGNTSGTLLNALIFHYPdnlliPRAGIVHRLDRNTTGILVVAKTISTYYFLINLFKKRKIIKEYDVIVIGRI-EVDGKIEKPIKRDIYNRTKMTVGI-GGKQAITYYSVITIFKNHT-YLRIQLKTGRMHQIRVHLSSIFHPVLGDKIYSKgiksnfsncskkmKNFLSKFNRPALHARMLNFIHPKTNKK---------
>UniRef50_D2R6S8(2-218:230) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6S8_9PLAN  E=5e-39 s/c=0.75 id=34% cov=95%
--------PRTPSLDILHEDNHLLVINKRPLLATQGvaEGTPSLVTEVQQYLKVKYKKPGNVYvgvvsRLDAHTSGVVVLARTSKAASRLAEQFREQGVEKTYWAAVEAAPEPASGELVSWVVKDDKNRRMTIADRKlaGCQKAVLTYETLEQN-KSAALVSVKLETGRKHQIRLQLAdELSLPVIGDRKYGSRIE--FPEGIALHARELAFDHPVGGKRLSFVAPLP-
>UniRef50_C2ELY9(80-297:310) Pseudouridine synthase n=10 Tax=Lactobacillus RepID=C2ELY9_9LACO   E=5e-39 s/c=0.75 id=30% cov=95%
----EFLKPSSNPVKPVLETKNYIVLDKPAGVLSIPSRYEDN-DAIVNRLMGYFAkknmsnlKPHVITRLDRDTSGLVLVGKNAIAHARFSKIGKEKFVKK-YHAIVHGNFseDKLTGVIDAPIGKKGSGVKRAVV--EGGKKAQTKYRVLKQVS-GASLVELRLLTGRTHQIRVHMAYLGHPLYGDHLYG---IEDDFSRQALNCFYLSFPDPFDNEKikeISIEEPTD-
>UniRef50_B6W8A0(62-273:282) Pseudouridine synthase n=2 Tax=Anaerococcus RepID=B6W8A0_9FIRM   E=7e-39 s/c=0.76 id=28% cov=94%
---ENLNyEPINKKIKILYEDKDIVAVDKPPNLTV----NSKNQESLSNYLAYYFKenkiksQIRLINRLDMNTSGIMLVAKNPFSHAYYQNQIENNELDKEYLALVEGNLIIDDF-CEIDIDYDKENKKMKVVSDKN--HVKTYFKTLKNYGK-FSLIYCKIYTGKTHQIRLSLAYLNHPILGDNLYGSKYD---IERFLLHAYRIKFKSFRDQKKITILSKPDF
>UniRef50_D1Y726(80-296:315) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y726_9BACT  E=2e-38 s/c=0.74 id=39% cov=94%
--------PRRLPLDVIYSDRCVMVVNKPAGLLSQP--DVKGEDSVVTRALGYavdpEFPPQLVHRLDRNTSGVMALALDGPTTRALMECFKARRADKRYWAIVIGELPE-RGRIDVPLLKDAD--KKLVRVDPKGERAVTEYKRL-TSSGAFSLAEVHLLTGRTHQIRVHMNHVGHPLLGDVKYGDFGSKGQLrslgvKRPMLHARSLTLNgLPAFLSHLegkTFRAPAP-
>UniRef50_Q5WF07(66-287:301) Pseudouridine synthase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF07_BACSK  E=2e-38 s/c=0.73 id=31% cov=93%
------LPPESPSLSlqpeqllfgIPYEDEHLLVADKPGHMATIPSRDRPGG-SLANGVLHYYKQQHLqatfhaVNRLDRGTSGLLIVAKHRYAHDLLSRLQQQGGVKRCYKALVTGVLSEKAGIINAPIDR-KPGSIIEREVGPGGKSAITHYKVEAESKTH-SLVSLQLETGRTHQIRVHFAYIGHPLVGDGLYGDHGE--ALAHQALHCDRVALTHPFTDEVLYVE-----
>UniRef50_A9BJA7(70-285:303) Pseudouridine synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJA7_PETMO  E=2e-38 s/c=0.75 id=30% cov=92%
--LEELSRPTQPSLkarpvsfDIIYEDKDLLVINKPAKVSVHPGSKEEMATIIegVMHYSRGEFEPHLVHRLDKLTSGVMVVAKNKQTARELTQLIKSRETRKYYLTLLVGNLNKKSGE------------LVSTVYGKTAQLKFNLKKKFDLFGELYSLVEIELYTGRKHQIRVQFADLGFPIAGDDNHGDKKQNKllrknyGLKRIFLHASKISFD--YNNKHYDFYAPL--
>UniRef50_B4UMB0(70-298:312) Pseudouridine synthase n=4 Tax=Anaeromyxobacter RepID=B4UMB0_ANASK   E=2e-38 s/c=0.70 id=29% cov=95%
-------PQPDAPLSVLLERPRYLVVEKPAGVAVHPLAPGEGG-TLANAVAARHPECaeaspepregGAVQRLDLETSGCVLFARDPEAWEALHAQLGAHTVDKVYLALAVGRL-PAGGVCSVPLaqrggrvvpAPDLEAEERLQARGLRPRPAETHYEPERRFADHT-LLRVRIVTGVMHQIRAHLALLGHPVAGDALYGGAAAGlPGLERQFLHAWRLAFDDPDGAGRVAVESPLP-
>UniRef50_C1ZMP6(5-218:246) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMP6_PLALI  E=2e-38 s/c=0.75 id=36% cov=93%
--------------HILFEDNHCLVVEKPAGVLTMGDETGDENMVQLAmddlKIRHQKPgnvYVGLVHRLDRPVSGVLLLAKTSKAASRLSAQFREREPEKVYLAIVEGQLNPAAGEIVDWLIKDqeRNHTRVTSPQTPGAKQAKLRYRQLETLVTPegiRTLVEVQPMTGRSHQIRVQLAHAGASILGDLRYGSKT--PLGKMIALHARSLTFEHPVQKQPLTIYAPLP-
>UniRef50_C1E0I0(74-305:318) Predicted protein n=2 Tax=Micromonas RepID=C1E0I0_9CHLO   E=2e-38 s/c=0.69 id=32% cov=91%
----------------LWEDEHLAVVSKPAGMLTHPneASGGATRTLVEALLDAFGDEglsaingadaRGIVHRLDKPTSGAMLVAKTDLAHAMCVAAWYQRKVTKTYLALVEGVPGRRRGRRRG---DDGDAMEGTCVAPADGRPARSDWRVVETFGEEdgddaeqlCSLVEVTPRTGRRHQIRQHMgMALDAPLVGDPLYRRGKrpntpataapflVGKPGSVLFLHSAALALRHPVTGEALSFSDPLP-
>UniRef50_A9DVX4(4-212:224) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A9DVX4_9FLAO   E=2e-38 s/c=0.77 id=30% cov=93%
-------------LEIIHENKDYIVVNKASGLISekSPYEAVTVEDQVFQHILksKRKPYVGIIHRLDRVTSGVLILAKKKSILVAFNKLFSSRKVQKTYLAIVKNKPTKSKGNLVNFLIKNNKEKKAEIVTtkSKEAQSCMLSYEVIGKNNIGY-LLAVKPKTGRFHQIRAQLANIGLPIVGDSKYGSDVSYKSLS-ICLHAWKLTFEDVETKEQKTFEASLP-
>UniRef50_D0LGK2(70-285:304) Pseudouridine synthase, RluA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGK2_HALO1  E=2e-38 s/c=0.74 id=32% cov=92%
---------------IAYEDAHVVVIDKPVDVSSVPYERRETGTAMDLLreawrkLRPDAGRTplHVVHRIDKATSGLLAFAKTKRAELGLAAQFRQHTLERAYLCVAHGAVRAQ--RIESRLVRDRGDGLRGSTRAPNqGKRAVTHVEVLEELA-RASLCQVRLETGKTHQIRIHLAERGHPLVGERVYKRDAEFRGhtlidAPRLMLHAATLGFAHPITGERVFVESPLP-
>UniRef50_B9L6Z5(63-273:294) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L6Z5_NAUPA  E=6e-38 s/c=0.75 id=34% cov=89%
-------EPNGYGLKPIFETTHFAVFDKPSGVAIHPKKLANTKSLLDDVRSLWGNDANLVHRLDKETSGLVMASKNKFSESVLKKAFQDKEIQKKYLALVKGHLEKDL-TIKKPIAVNKDENIKVKVmIHPEGKESVTIIKPIKKIGENT-LVECIPLTGRQHQIRVHLFSIGHPIVGDPLYGvdnefadrylnklidekERIEKTGAKRLMLHAYYLEF-----------------
>UniRef50_P72970(52-273:291) Uncharacterized RNA pseudouridine synthase slr1592 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1592_SYNY3  E=7e-38 s/c=0.72 id=30% cov=97%
-----WVEPEVPlQLSVLHRDEDLWAIDKPSGLPVLPG-GDFVYHTVLEQLKIQYPQEslFPLHRLGTGTSGLLLLGRSTLGRRELSRQFREHICRKIYRTVIGPCDLPEKFECHQAIGKIPyPQLGYIYAASSHGKPAQSYGRILARSPEKT-WLEVEIRTGRPHQIRIHLASLGYPLLGDRLYGPggvpincRTARPSDGGYTLHSYQLGFLHLHTQQAIKLTAPLP-
>UniRef50_C7LP91(8-218:245) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP91_DESBD  E=8e-38 s/c=0.75 id=29% cov=93%
-------------IPVLHRDEHLIAVHKPAGLLVHRNAHAGREPFLLQILRDQLGQRlYPVHRLDRPTSGLMIMALSPQAAHALALQFASQEVHKTYLAVTRGFVPP-QGLIDDALKSESGSLQEARTEFTRLATAEIPHPVGPNPTARYSMVRVRPRTGRTHQIRRHFAHIRHPLIGDVLRGDGRQNRFfrdhfgLHRLLLASVELTFRHPEDTSPMTLTCPP--
>UniRef50_C6LAK4(56-270:272) Ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAK4_9FIRM  E=9e-38 s/c=0.73 id=33% cov=93%
--------------DIIYEDKQLLVCRKPAGLAVQNASFGRmdlesmVRNYLMEKSGKPNPYLGVVHRLDQPVQGLLVFAKTPAAAAALSAQVQDGRMTKEYLAVVCGKLPEKEGELVHFLKKEPAGNCSRAVgeKTPGAKRAELSYRVLA-EADGRALVRIKLKTGRHHQIRVQMVACGAPLYGDAKYNPGAQRG--ERLALCADRLSFVHPAGGKRVEFTCrpdnfPAPW
>UniRef50_B2UKZ0(14-247:258) Pseudouridine synthase n=2 Tax=Verrucomicrobiaceae RepID=B2UKZ0_AKKM8  E=1e-37 s/c=0.68 id=32% cov=94%
-----------PHFEVAAESGDWIVVDKGAPLIVHPSNGKkepcllEGVEALLSYEIANGAALSLVNRLDRETSGLTLVAKHKRAARELGRAMQRRLIHKEYLAIVQEWPEWTETACTAPILRQgevaESRIWVKQAVHPAGKACTTvfrKERTWNTRRGPLALVRCIPETGRMHQIRVHLAHLGHPILGDKIYGPSehcyleyiqhgwsrelEERLVLPRHALHACRLEF--PFDEETFTAEAPLP-
>UniRef50_B7G8W7(1-235:235) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G8W7_PHATR  E=1e-37 s/c=0.67 id=38% cov=93%
-------------LQIVYHDSDIVVVNKPPDVLTVPG--IHSRSCVLDLVHDRFGEavqdkaHMIVHRLDMATSGIVLFGRTLNITKRMQAIFRDRLVLKTYQALLMGHFPIDKGTIDLPLQRDHEYPPFMRIstptseadavqavkdlqqhgwkklIRKKPKPSQTSFRVLArsfRNGLPFTRMELVPVTGRTHQLRVHCAALGYPIVGDPTYDEYVPNEKA--MCLHAALLQCEHPTTGMPIVFEASPDF
>UniRef50_Q2IJ07(8-224:241) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=Q2IJ07_ANADE   E=2e-37 s/c=0.73 id=34% cov=94%
------------PVAVLHEDAALLAVDKPAGRLVIPGR-EGGEPSLREELEARFGRLWVVHRLDRNTSGVLVLARTAAAHRALNLAFDRGEPRKRYLALVRGVPPAEQRIEVAIAPARKGRMRPAAPDDPRGKPSATVVRRLEAYpshplgGGPLALVEALPETGRTHQIRVHLAAAGTPLALDPAYGdaapllGPGGEPVLARTPLHAARLALRHPADGRELVLEAPLP-
>UniRef50_A9E330(80-276:300) Pseudouridine synthase n=1 Tax=Kordia algicida OT-1 RepID=A9E330_9FLAO  E=6e-37 s/c=0.79 id=31% cov=84%
-------------ISVIFEDDEIAIINKPAGFPTNGNYFKTIENALPHNLKPSnsidaLPFPKPVHRLDNPTSGILIIAKTKSAQISLYQQFEQQEISKTYQAIV--------------IGKTDKEGEITSAVAE--KEALTNYETLQTvsslQNGHLSLVKLFPKTGRTHQLRIHLASINHPIVGDQLYGKAEENYK-KGLFLCATSIQLIHPKTKEKLVFT-----
>UniRef50_C7G8E5(9-218:221) Ribosomal large subunit pseudouridine synthase family protein n=5 Tax=Clostridiales RepID=C7G8E5_9FIRM  E=8e-37 s/c=0.74 id=30% cov=93%
---------------IIYEDEDIIVCKKPAGVATQTRRiGQADMESLLKNYRAskgELPYIGVVHRLDQPVEGIMVFAKNKEAAADLSRQIKTKLADKYYYAMTDGVPEKKKGTLEDELLQNGKTNTSEVVERgtPQAKHASLSYEVVEQDGKH-AVLRIKLDTGRHHQIRVQLAHAGMPIVGDKKYNFKENIAPSGGQlALCSFKIAFRHPKTHRKLEFEIDKPF
>UniRef50_Q6MND5(4-219:228) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND5_BDEBA  E=9e-37 s/c=0.72 id=29% cov=95%
-------PSAPIQIPIVEKSKHWLVINKPSGVSVHNDPPDVRTLLKKQLTPGTYQDIHPVHRLDKETSGLLLVGLDAETAANLSGQFQEHKVEKTYYALLRGelPVSTDWQEWNTPISDKAEGRKNPQGLLKDRVEARTLYKVLE-ANKYFSLVEVRLITGRQHQIRKHTALIRHAIVGDTRYGDPKYNermaniYQTKRMFLHAARMTVM--INGYKHSFEAPLP-
>UniRef50_A4ANB8(103-300:308) Pseudouridine synthase n=3 Tax=Flavobacteriales RepID=A4ANB8_9FLAO   E=2e-36 s/c=0.78 id=33% cov=88%
------------PLKMLYEDEHLAAIHKPSGILVSGNSFKTITHALSQNLepsnLPDSTLPQPVHRLDYATTGILLIGKTSSVIRALNGMFERKEIKKTYYAI---TMGKMEIRGEVTLKIDNKNAQSKYVVEET--------VPSERFGQ-LNLVKLTPITGRRHQLRIHMSGIGNPILGDSDYGTKDLILKGKGLYLHAYSIEFNHPYTNEKLLIKS----
>UniRef50_B2IK20(89-325:350) Pseudouridine synthase n=2 Tax=Beijerinckiaceae RepID=B2IK20_BEII9   E=2e-36 s/c=0.65 id=37% cov=93%
--------------MILFEDRDLMVLNKPFGLAVQGGSGMTHHIDkmLASLPNERGDRPVLVHRLDRDTSGVLLVAKTRRMAAELGEIFRSRQARKIYWAVVEGVPKPAQGRISLYLAKGEGMEDKRgphgrdaearaglekmrvaKHGEEDARHSVTYYAIVDKVPSRLAWLSMKPITGRTHQLRAHAEAIGHPIIGDPKYGLKPKDDPrrndpnraipegvERKLHLLARRLILPHPRGG-ILDVTAPLP-
>UniRef50_C3RID1(68-269:278) Pseudouridine synthase n=3 Tax=Bacteria RepID=C3RID1_9MOLU   E=6e-36 s/c=0.75 id=27% cov=90%
-------EPYPLALKISYEDENFLVIDKPAGLPSIPTKRYP-RNTLANAVVYYYQSQgikatvHLVNRLDKDTQGLLLIAKNSYAHYLLSRDI--KQVRRVYHCV-VEGVLTGQGTITAPIIKDKKSVKR--LIHPAGKFAVTHYRGLEVSA-NQSKIECILETGRTHQIRVHLSSINHPLVGDTLYDSIYQESY----YLDSIALSFIDPFTQRLIEVK-----
>UniRef50_A4A1L7(2-226:250) Putative 23S rRNA pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1L7_9PLAN  E=8e-36 s/c=0.68 id=32% cov=94%
-------PPAN--VDILYEQGPCFCIAKPAGLLTQ---APPHIDSLESRFKAFIRQRdfktgkvylGVPHRLDRPVSGVLTFARNVRAARRISQQFETRLVRKLYWAFVAGQPPDDQGVWEDPIRKIPDVAMAEIVSPSDpgARWAKLKYEVLQRTEQG-AWLEIELDTGRYHQIRVQCASRGFPILGDVSYGGEipfgpqSEDERARHIALHARYLRLKHPMVDEIVAVTAPLP-
>UniRef50_B8GBL0(63-296:307) Pseudouridine synthase n=3 Tax=Chloroflexus RepID=B8GBL0_CHLAD   E=1e-35 s/c=0.65 id=32% cov=93%
--------------HIIYEDDDLLVINKPPACYTgdTPWDTQGSVLAVARRLLTERdglvPTLHLAHQLDAGTSGILVISKHPRANAPLQAAFNHGQVDKRYLALCAGHPPTATELITGH-GRAAAGRWRLYEQAEIGKVLPNGQRVkrahtqieLRRQYGDVALVWAKPLTGRTHQIRLHLVALGCPLLGDERYGGPTTVAGmlIPHPLLHAAELALPHPRSGRLLNIFCPPP-
>UniRef50_Q86P70(376-554:739) RH45372p n=20 Tax=Neoptera RepID=Q86P70_DROME   E=3e-35 s/c=0.84 id=31% cov=77%
------------PIKIVHMDEDIVVVNKPASIPVHPCGRYRHNTVVFILAKEfNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEYICRVEGVFPDGIVECKEPIEVVSYKIGVCKVSAK-GKDCTTTFQKLSQNGT-TSVVLCKPLTGRMHQIRVHLQYLGYPILNDPLY--------------------------------------
>UniRef50_B6BGX6(75-293:308) Pseudouridine synthase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGX6_9PROT  E=5e-35 s/c=0.68 id=34% cov=91%
----------------VY--DEFVVFDKPSGVLIHP-QNRKTPYSLIDELKYQYGRDAnIAHRIDQETSGLVLCAKNKESERDIKMMFEQRDMKKKYLALVHGELKESICIEEPLLRREDESAIVRMVvkVHEEGKASKTDIRPLKYFAEtDMTLVECSPYTGRQHQIRVHLFHVKHPIVGDPIYGQSEEDivkfldkeldaekrielSGASRLLLHANELEFE--LYDSVYNIKSKVDF
>UniRef50_Q1VZ16(84-281:292) Pseudouridine synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZ16_9FLAO  E=8e-35 s/c=0.75 id=33% cov=86%
-------------LKVIFEDDSMAVVNKPEGYPTNGNYFKTIENALTYNLktsseKDKLPYPQPVHRLDNPTSGLLIIAKTLSSKSYLSVLFEHNKVHKIYLAIVEGHFEGLSDIISLDI---------------DGKQSSTNYGVEKMFKinqDEFSLLSLKPSSGRTHQLRIHLSKIGHPIVGDKTYGS---LTLSNKLMLHASSLELRHPKTDKSLSFETEVP-
>UniRef50_B2AE77(135-347:479) Predicted CDS Pa_4_3110 n=9 Tax=Leotiomyceta RepID=B2AE77_PODAN   E=1e-34 s/c=0.69 id=34% cov=80%
-------PPVTQdPVQVIHEDDDMIVINKPSGVPVHPA-GRYHYNSVVEIMKAERGPtfaPRPCNRLDRLTSGIMFIAKTAKAAESLSAQIFRRSVRKEYLARVVGRFPDGEVVCDQPILQISPKLGLNRV-RANGKSAKTVFKRLAYYPspiikpsssnspspdeaetggpedqftretEGYSIVRCLPVTGRTHQIRVHLQFLGHPVQNDPIYAN------------------------------------
>UniRef50_B8HC32(78-318:326) Pseudouridine synthase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HC32_ARTCA  E=3e-34 s/c=0.61 id=30% cov=96%
------LPPEtriPVDLSILHQDEHLLVVDKPHFLPTTPGGTYIQESALVrLRNQLDLPDLIPMHRLDRMTAGVLLFSTNPQTRGKYQVLFEKRQVQKEYECVSAADPAPGHPAVEFPVVVRNRMTKSRSYllaeVVEGEPNAETRIERLETFDGGASpdtngstaavpgsptrlaRYRLEPHTGKTHQLRVHMASLGLGIVNDAFYPdllDKAPDDYAKPLQLLARGIRLVDPISGSPVEYRS----
>UniRef50_B0S254(63-264:273) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S254_FINM2   E=3e-34 s/c=0.73 id=29% cov=89%
---ENKYEPINMDIEVLYEDDDIFVLNKP-DKLTMNKDGEKSLANFVSYLFEQRnikQKVRFINRLDQDTSGVVMVAKNKIAQAYY----QKNSFKKKYLAIVKGNPK------DQKIELNLKRDGIKTEIDENGKKSVTILENLKNYGD-YSLVSLELLTGRTHQIRVSMEYINCPIVADSLYGEKIENFT---QMLHANEIEFVD-MKGEYHNIT-----
>UniRef50_A6GAA8(88-301:311) Pseudouridine synthase, RluA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAA8_9DELT  E=3e-34 s/c=0.69 id=32% cov=92%
----------------VHRGEDFVVLDKPAGVPV-SAVRETCVGSLSEALIHQLeseglerPYVGVVHRLDQGASGLVLFTIRDVANKSLHKQFRDHEIRRGYRVRVTGEP-PAQLRCDAPLIKLRSGGVKVGSPGDGrSKPATTHFRHVARvdgEAGPEHLLDVEIETGRTHQIRAHAAHLGFPIVGDRRYGADgegEAGSDHSRLCLHARSLEFEHPLTGAPQSFTCELP-
>UniRef50_B6JZY3(92-274:401) DRAP deaminase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZY3_SCHJY  E=3e-34 s/c=0.80 id=30% cov=80%
-------PPVtDEPVRIVHEDEEYVVIDKPAGIPVHPTGRYNHNTVLHILMHENkCPLLYPCNRLDRLTSGLMFFSKTPKGAERMRVHMISKDLQKEYVARVVgEFPAEKTITCDAKLLTVAPTLGLNRV-HPDGKDAVTIFKRLAFDG-HTSLVHCKPLTGRTHQIRVHLQYLGYPIANDPIYAN------------------------------------
>UniRef50_B3E6K8(76-269:300) Pseudouridine synthase n=1 Tax=Geobacter lovleyi SZ RepID=B3E6K8_GEOLS  E=3e-34 s/c=0.75 id=32% cov=87%
-----------PPIDLLWQDDRLLAINKPAGLAMHPAAEVDENLadiaSAWLEKKANYPvRAYPVNRLDRGTSGVVLLATSSSNAGILGRQVKEEGLDKIYLTV-VEGMLEGIGEISQPL---------------DGKESISRYRSLSV-GESCSFLLVEPVTGRTHQIRRHLSAIGHPVLGDKRY-DAQPLATLPGIALHSFRTRLQHPTPETRLTLCAPLP-
>UniRef50_Q04TZ1(74-376:377) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04TZ1_LEPBJ   E=4e-34 s/c=0.48 id=29% cov=97%
-------PPVRKDYKILYEDEFFVAVDKPGDLPVHPAGKYRKGNLLtLLKESGKFENLFTVHRLDRETSGVVLFAKDSKAASLLSGLFSSRKIQKYYITKVYGDFPrrkiaygvlkpdvssiirkkrKFFLLKSNFLKRNKKYFLENSFSPEeefcltafrkiesyfiktqfqeiesdvgelkvrsrkkklnfeslqtqNEKNEEPKVRSIYPKHEFYSFVLCKPITGRMHQIRAVLYGLDFPIWGDKLYGKDEevflefiegknpdltERLGMERQALHAYAIRFNHPITNRKMKIVAsvPKDF
>UniRef50_Q9UJJ7(9-230:312) RNA pseudouridylate synthase domain-containing protein 1 n=23 Tax=Deuterostomia RepID=RUSD1_HUMAN  E=7e-34 s/c=0.66 id=35% cov=93%
-------------LSIVYRSRDFLVVNKHWDVR-IDSKAWRETLTLQKQLRYRFPEladpdtcygFRFCHQLDFSTSGALCVALNKAAAGSAYRCFKERRVTKAYLALLRGHIQESRVTISHAIGRNSTEGRAHTMCIEGsqgcenPKPSLTDLVVLEhglYAGDPVSKVLLKPLTGRTHQLRVHCSALGHPVVGDLTYGEVSGREDRPfRMMLHAFYLRI--PTDTECVEVCTPDPF
>UniRef50_C9LLD9(91-293:313) Pseudouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLD9_9FIRM  E=8e-34 s/c=0.71 id=29% cov=86%
---------------IIYEDEHILIVDKPAGILTQSDNSNELSlnDALLDYCHYNNHstaKPSVCNRLDRNTSGIVLCGKTVKGLQMLNEIIKNRTLHKYYRCIVLGETKEQD-TLKGFLIKNESANQVTIITEqkDNAVPIETRYKRIstmERAGNICSLLEVRLITGRPHQIRAHLTSIGHPILGDRKYRNKKSieiskALHIPHQLLCACSITFP----------------
>UniRef50_A0JSJ6(78-305:314) Pseudouridine synthase n=2 Tax=Micrococcaceae RepID=A0JSJ6_ARTS2   E=1e-33 s/c=0.64 id=28% cov=96%
------LPPEtrlPVELSILHQDDHILVVDKPHFLPTTPGGTYIQESALVrLRNQLDLPDLIPMHRLDRMTAGILLLSTNPETRGKYQVLFEKRQVQKEYECVSAAEPAAGYPAVGFPVVVRNRMTKSRSYllaeVVDGEPNAETRIELTKTFDAGTHaseparrgLYRLEPHSGKTHQLRVHMASLGLGIVNDAFYPellDKAPDDYTRPLQLLARGIRFIDPITGQPVEYRS----
>UniRef50_Q5Z213(14-228:260) Pseudouridine synthase n=2 Tax=Actinomycetales RepID=Q5Z213_NOCFA   E=1e-33 s/c=0.67 id=36% cov=89%
----------------LAEDDAVLALNKPAGISVT---GERHDTDIVELAAGAGERLFPVHRIDKVTSGLVLLAKDLAAHGTLTRQFTKRTAEKAYLAVVAGGGLPDRGVIELPLSVGRKNRvriaaPRESIRAEDGRwfvddadllavknyPSRTEFVTLARTADRT-VLALRPVTGRRHQIRVHLAWIGHAIVGDPLFDKSAAH---PRAHLHSWRLVLDAPwRTPPELDLTAPPD-
>UniRef50_A0C2P1(89-275:469) Chromosome undetermined scaffold_145, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0C2P1_PARTE  E=2e-33 s/c=0.77 id=30% cov=81%
-------PPIlDLPVDIVFEDDSFVVVSKPPSMIVHTGGGyHYNCLSAILHFEHGLKDLYVLHRLDRLTSGLLIFSKNRLLAQKFHDANSKLNVQKTYLARVQGNFSEDIKENNKPQYCVSMKDAIFACCTEedaqklDAKSATTKFEKLWYDPiSDSSLLECKPITGRTHQIRVHLADLGHPILNDIGYGGK-----------------------------------
>UniRef50_A4S8W7(13-242:264) Predicted protein n=2 Tax=Ostreococcus RepID=A4S8W7_OSTLU   E=2e-33 s/c=0.63 id=34% cov=93%
-------------LEILHEDEEMTCVNKRAGTASTPESRVADSsaaSLVVARWRRRLVDAHdgalasnvvlgaslvpyVAHRLDLETSGALVVCKNAKAAARAQGAFERREVEKTYLALCRCDEFDVsgggasSGTIDLALaKRDDGARFFVETSSADGKPASTEWTIVARNR-RHALVRCRPKTGRTHQIRVHLAAIGLPIVGDAAYGCLDA-DVVDRHALHAWTLRFPAKDFAGVPRIVAPVP-
>UniRef50_A7RMP5(76-265:418) Predicted protein (Fragment) n=2 Tax=Metazoa RepID=A7RMP5_NEMVE   E=2e-32 s/c=0.74 id=31% cov=80%
-------PPVtDQPLEIICNTDDIVVLNKPSSIPVHPCGRYRHNTVVFLLGKEHNLRNlYTIHRIDRLTSGILMFAKTLTRARMLEAQVRDRQVEKEYLCRVQGEFPSEPVDCEQPIIVVSHKVGICRV-SPDGKSCRTVFTKLHSNGK-SSVVKCIPYTGRMHQIRVHLQWLGYPIIDDPIYNHP-----------------------------------
>UniRef50_Q1UZE2(92-287:304) Pseudouridine synthase n=3 Tax=Candidatus Pelagibacter RepID=Q1UZE2_PELUB  E=2e-32 s/c=0.72 id=33% cov=86%
---------------IIDNNDDFIVLNKSSGISVQGGT--KSKKNLVDIFARseifQDTKPFSVHRLDKDTSGVFIMAKHRQSAQLLTSLFRLRKVHKTYLAICHGELQKDSGEWNDDLTRYDNDR-------EVVEKARTLYKVLDKNSI-CSLVEMKPITGRKHQLRKQLYAVGCPIYGDQKYKfSNTDKAINKNLMLHSYQIKFM--INDKKYTYTA----
>UniRef50_Q96CM3(99-346:377) RNA pseudouridylate synthase domain-containing protein 4 n=19 Tax=Amniota RepID=RUSD4_HUMAN  E=2e-32 s/c=0.56 id=34% cov=86%
---------------ILHQDKNLVVINKPYGLPVHGGPGVQLCITdvlpILAKMLHGHKAEplHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPMPSAGVVDIPIvekeaqgqqqhhkmtlspsYRMDDGKMVKVRRSRNAQVAVTQYQVLS-STLSSALVELQPITGIKHQLRVHLSfGLDCPILGDHKYsdwnrlapqklsvgtlkklGLEQSKARYIPLHLHARQLILP----------------
>UniRef50_A1KTA8(96-303:307) Pseudouridine synthase n=24 Tax=Neisseria RepID=A1KTA8_NEIMF   E=2e-32 s/c=0.67 id=29% cov=90%
--------------KILHIDEHLIVVDKPHFLPVIPS-GRFLRETLLTRLRLRPELQHlnveditPLHRLDKDTAGVMLLSHNPATRGAYQTMFQNKTVWKTYEALALTRtDLPYPLDVVSRLVRGEKFFTTQEV--EGVPNAHTTVELIENRGE-FSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYpvlSEAGSEDYRKPLKLLAKKIAFADPLSGRERVFCS----
>UniRef50_D1B0V0(70-288:302) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0V0_SULD5  E=3e-32 s/c=0.64 id=33% cov=90%
----------------IFETEDFAVFDKPSGVMIHP-RKRSDGYTLNDEIKSLYGKDANaAHRIDKSTSGLVLVGKHKQSEIALKEIFATRKVQKSYIALVKGHLKEELLIDEKLKRDVETSQIRLKVhVDERGKPSQTKVIPLHYFEDKdATLVQAFPYTGRQHQIRVHLFHVKHPIVGDMIYGVEEEDAeryldgsmsaeeqyektLSSRLLLHAYSLSFN--FKGVDYTIES----
>UniRef50_A1WL43(98-304:314) Pseudouridine synthase n=12 Tax=Proteobacteria RepID=A1WL43_VEREI   E=5e-32 s/c=0.67 id=31% cov=93%
--------PFAPTL--LHQDPHLVVADKPHFMPVTPsGRYLQHTLLVRLKRQLGLPQLSPVHRIDRDTAGLVLLSVQQCTRGAYQALFRERRITKHYEAIAPWRADVVFPRDHTSRIEPGPQFFRMQEV-PGPPNSHTHMQLLAVAGD-WAHYRLSPSTGKRHQLRVHMAALGLPLRNDPFYPvvdDPPPGDYSRPLQLLARALEFVDPLSGERRVFES----
>UniRef50_C0NWM0(112-351:545) DRAP deaminase n=10 Tax=Onygenales RepID=C0NWM0_AJECG   E=6e-32 s/c=0.58 id=31% cov=81%
-------PPVtSQPISIIHEDDDMIVIDKPAGVPVHPA-GRYNYNSILEIMKAERGNgwvPYPCNRLDRLTSGVMFIGKHPKGAEQIGEKLRSRTVRKEYVARVKGKFPDGVVLCDQPMLKISPILGLNRARAS-GKEARTKFRRIAYYPphkqagkkqglsagpatppatlpdqmnisdsqtdtptgaaipvpmspdeEGYSIVHCLPLTGRTHQLRVHLQYLGHPITNDPIYSNRR----------------------------------
>UniRef50_UPI00015B45C3(20-239:272) PREDICTED: similar to conserved hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B45C3  E=1e-31 s/c=0.63 id=36% cov=84%
-------------IEILHQSDNFLIVNKPYDMVI--NSNNPSVKSVQLIIREMFPnlvnpnlyhEFYFVHRLDYATSGVMCLALNKQSAQAASSAFEERTVRKYYLALVHGHIDKYSMVIDIPIGHDvrelNGNRKMCTKDDdfcEKARKSCTALLVLEKgyiDDRPVTKVLLYPKTGRRHQLRVHCAHIGHIIVGDYTYSGK-TDTKPHRTFLHAFRL-------------------
>UniRef50_C0QI10(68-289:298) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI10_DESAH  E=1e-31 s/c=0.62 id=28% cov=91%
--------------EILFHNDHLIAACKPHFLPVVPS-GPHVNETLLNRLKIRFsnPDIVPIHRLDRETAGVVLFSVEPETRGAFQHLFMEKKVKKTYEAVTR-RPGTLPHLPSVIVNRIERGEPWFRNTIVPGRPnAETRLELVGADRDR-AFFRLYPQTGKKHQLRLHLASLGFPIENDRCYPDllpKQGDDWEHPLMLLSREVRFMDPIAGRERVFTSP---
>UniRef50_B5Y592(1-175:175) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y592_PHATR  E=2e-31 s/c=0.79 id=43% cov=76%
-------------LKIVHEDEHIIVVDKPSGVLTVPS--DKNVPSLAQAVFDHCQPTEvtldqmVVHRLGMDTSGLIVLAKTMDTVRQMNALFRTRKITRQYEALVVGHLPQHGGLISLPLMRDYEHPPYMRKLLEMPKESLTKYEVVNRedmDGTPVSRVALTSISGRTHQLNVHLAAFGHPIVGDSVY--------------------------------------
>UniRef50_Q6NEJ6(116-344:349) Pseudouridine synthase n=6 Tax=Corynebacterium RepID=Q6NEJ6_CORDI   E=2e-31 s/c=0.60 id=31% cov=95%
-------PAPEPTIPysctVVYEDDTLLVADKPPFLATMPrGKHITNSATVQLRRSTGIDELSPAHRLDRLTSGLLLFTKRKRVRGAYQTLFSERNVRKTYVATAQYNPSITPGTIWRShmtktageiqgHIIDAPPNAETLVSAIERIDAPTQQHLHALHGTDVdlAHYTLKPHTGKTHQLRLHMLAAGVPILGDTIYPtilAEDAEDYSRPMHLTSTELEFIDPLTGRPRLFT-----
>UniRef50_Q00YR3(57-253:300) Probable pseudouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YR3_OSTTA  E=2e-31 s/c=0.70 id=30% cov=88%
---------------VLHESEAVVIVNKPRGMSFH----SEFAPGALARLRTQMGERTavmSVHRLDKPTSGILVFAKNARARDALSKAFEEREIVKYYVGMSNRKPRKKMGTVRGDMTRSR--RKAWMLTSTTESPAETKFVSFGARGMGeraLRMFVFRPMTGKTHQLRVAAKSLGSPLLGDDTYGG---ERDVDRTYLHACAIRIPKSVLGETIQIIC----
>UniRef50_C4LE96(102-310:316) Pseudouridine synthase n=23 Tax=Gammaproteobacteria RepID=C4LE96_TOLAT  E=3e-31 s/c=0.66 id=30% cov=90%
--------------SILYMDEHLLIADKPHFLPVTPA-GDYVSQTLLARLVARLNNFElqPLHRIDRHTAGLVMFSVQKKSRAAYQALFRDRKIEKRYEAIAPALPQiAFPHIRATRIERGEPFFLSQ--ETAGTANSQTIIDVIERRAD-LWKYALNPVTGKKHQLRLHMSALGAPIYNDAFYpsvNDDVADDYQKPLQLLASELTFVDPVSGVKRHFKS----
>UniRef50_A5CFM2(98-299:312) Pseudouridine synthase n=2 Tax=Orientia tsutsugamushi RepID=A5CFM2_ORITB  E=3e-31 s/c=0.68 id=28% cov=90%
------------------ETSDYIIINKPALLPTQGGSKISLSldDAIKYLNKSFYYDFKLVHRLDRETTGLLIIAKNHGTAIKLSQAFLHHSIEKEYIAILQGVPSQLSGEIITNITKTGD---RMIETQNGGKVSITKYQVKAiSINSQLSLVSFIPVTGRTHQLRVHAAKIGYPIIGDKKYNISNTYYNYS-LKLHAAKICIPKHLFGNQRIYYAPLPY
>UniRef50_Q1QR55(9-277:292) Pseudouridine synthase n=4 Tax=Bradyrhizobiaceae RepID=Q1QR55_NITHX   E=4e-31 s/c=0.51 id=29% cov=96%
---------EQIQARVLHRDGLMLVIDKPAGIPVHRGpKGGANLEASFEALRFGLPRPPvLAHRLDRDTSGCLVLGRHRKATASLGLLFKHGKISKTYWAVVEGGPTEDEGTIDIPLGRLNHERGWWQKPDPNGLPSVTRWKVLGRgiftaasdrfspspcgvetsearpegagargnsdgiapdhppprareEGIQLTWLALEPVTGRTHQLRVHCAAMRWPIAGDNIYGTQASlrrlrneqyipQFGEPSLHLHAREIAIPLSKNKPPIVVTASAP-
>UniRef50_Q317H5(97-309:332) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=Q317H5_DESDG   E=4e-31 s/c=0.64 id=32% cov=90%
--------------QIIASGDGLLVINKPAGLPVQPGTG--HTDCVTARLAAHFagadFMPAPAHRLDKNTSGLLLAGTTYTALRTLQDLFRNgHSLIKDYCAWVCGIWPEQEALTLTDVLVKEGTPGKEKIhalpagsaqphtAPPKGREALCQVVPLLRL-DNATLLGIRLATGRTHQIRVQLASRNHPVIGDVKYGAPACRAG---MLLHAFRLVLPAPFGRE---FFCPPPW
>UniRef50_B7PYG1(184-429:443) Ribosomal pseudouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PYG1_IXOSC  E=7e-31 s/c=0.55 id=31% cov=93%
---------------VLYNDNDILVLNKPYGMLCHGPAPGVSDACVLTKLLPDLssalyprqdAKLYTVHRLDRDVTGVLLLARTQRMADMLNSLFQKHQVSKTYLAITAGVPDHLEGVIDMPLAEGEVEGAKRMVLNPKLDPefqrlvpkfrksfaAVTTYRVLASCG-RAGYLELRPTTGVKHQLRAHLGlGLRCPILGDHKYshlrrlapqklpgdmldrlGIRQSKVRDAPLHLHARAVVVPEILDGRNLTVAAEVPY
>UniRef50_UPI0001BC98D7(106-318:324) RNA pseudouridine synthase family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC98D7  E=1e-30 s/c=0.63 id=30% cov=94%
--------PNETPIPvletILYADEHLVVADKPHFLPVTPAGEYVEQTLLRRLIHRlGNPDLVPLHRIDRHTAGLVLFSANRQTRSAYQALFPTRQIDKFYEAIAPALPgLEFPRLHESRLVEGEPFFRMQ--EGAGASNTRTQIEVLER-QDQLWRYGLYPVTGKKHQLRVHMAALGAGICNDPFYPDvvkNPVDDYQNPLKLLAKGLRFIDPLNGKQRQFES----
>UniRef50_A6DFD4(6-188:231) Pseudouridine synthase n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFD4_9BACT  E=1e-30 s/c=0.74 id=28% cov=84%
--------------EVIEEFEDFILVNKKPGENFHSESGEEG---LFHQLKEHYGELYPVHRLDKVTSGLLLMARNLQSCQELNQLFEAQKIEKFYLAISDRKPKKKQGWVIGDMEKSRRGGWKLCESRKN--PAVTQFFSYS-IGQGKRVYLLRPRTGKTHQLRVAMKAIGAPICGDPNYYPGLIKGHEERCYLHAYVIRFT----------------
>UniRef50_A4QI08(90-315:322) Pseudouridine synthase n=5 Tax=Corynebacterium RepID=A4QI08_CORGB   E=1e-30 s/c=0.60 id=30% cov=94%
--------PIPYKIHVIHEDDDILVIDKPPYLATMPrGRHITETALVKMRVLTGNNDLTPAHRLDRLTSGVLVMVKKPELRGAYQTLFARREASKTYEAIAEFVPgllDNGPAIWESRIEKERGIVQAFVV--EGPVNARTELVSVTPVDDaeqsileemhgplpRQARYVLAPSTGKTHQLRIHMRDFAAPILGDPLYPvlhAVDDEDYTTPMHLIARTLTFVDPQTNEERTFVS----
>UniRef50_C8X2D1(5-196:237) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2D1_DESRD  E=2e-30 s/c=0.70 id=25% cov=87%
------------------EDERFLCIHKDPGVDCHTDNGSSGVIRAVQ--SAYRIRLFPLHRLDKVTSGLLLLAKDRETARSMGELFSAHRIDKFYLALSAKRPRKKQGTVIGDMRRSRRGTWRLERSREN--PAVTQFVSRAWSGGKRAFL-LRPQSGKTHQLRVALKSLGAPILGDPLYGPR--NHSQDRCYLHAMAVSFE--LDGERYSFWTPP--
>UniRef50_D0WNY8(93-298:306) RNA pseudouridylate synthase family protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNY8_9ACTO  E=3e-30 s/c=0.65 id=29% cov=94%
------DEPDAPlELDVVDGTDRWIAVDKPAGMATMPrGKHVAQTVTIAARRHFSNPEIVAAHRLDAATRGVLLLTLAKRWRAPYQMLFERREVRKAYLAVAPADDRFVEAQTVALALAKPRGSLKALVV--DGQPNAVTTVRLADERRGLGLYEIEPKTGRTHQIRVTMSHLGIPIVGDWLY--PEVRDGGD-LQLLAARLEFVDPANGLEVALKS----
>UniRef50_D2NPM0(127-369:377) Pseudouridylate synthase n=2 Tax=Rothia mucilaginosa RepID=D2NPM0_9MICC  E=4e-30 s/c=0.55 id=30% cov=96%
------DEPELPsDMPVLYEDEHVLAIDKPHFLPTTPrGAYIAQTALTKLRVREQNPLLIPIHRLDRPTAGVLLFAKTVEARRPFQMMFQHRRVSKTYRAVAPVPADPAAaeralsaeGLQVRSHIQKIRDQLQVQQLSEEQCAAQgvepntlTTAKILQTFTPSaqavegwraepnreWALYDLAPHTGKTHQLRAHLNMLGSPILGDVLYPqvlPDAPDRPEYPLQLLAYSLHFEHPITGERVDLYS----
>UniRef50_A8EW74(60-245:251) Pseudouridine synthase n=4 Tax=Epsilonproteobacteria RepID=A8EW74_ARCB4  E=4e-30 s/c=0.72 id=29% cov=84%
--------------KVIFEDKDILVVDKPAFL-------------TADEVCKKFENAILLNRLDKETSGVMMFAKNEEFQKKAIKEFQANRVYKEYVAIVEGKVVDEIEIDKPILTTKDRGMAKSKIDVKRGKPAKSTVYPLLVEGNK-SKIKVVIESGRTHQIRVHLNSVGLPIIGDAIYGRVSSN--VNRVLLHSKITKIFD------YTFEAhePKEF
>UniRef50_Q0I6U3(91-316:327) Pseudouridine synthase n=11 Tax=Synechococcus RepID=Q0I6U3_SYNS3   E=5e-30 s/c=0.59 id=28% cov=94%
-------------LEVIHDDGDVLVVNKPSGLPVMPGGGflVHTLTSLLERSSRSVGEvlvPKPIHRLGRFTSGLQVCARRPETRAALSKQFRpEGDCRKTYLGLTHRLESLQQGqtlVIQTDVVERQHPLLGWVWGPEPSTPEPLRRRLsahsevqLRERGEREDLLEVQIHTGRPHQIRIHLAQLGFPLLGDPLYQSDQglcatATPGDGGYHLHAWRLEgLCWP-TSKWLSLKAQPP-
>UniRef50_Q6NI05(35-240:243) Pseudouridine synthase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NI05_CORDI  E=5e-30 s/c=0.65 id=28% cov=91%
--------PEEPSIPfdytVIARTPDLLVVDKPCFLPaTSNGRIVAETVQTRARIRENNPHIVPLHRLDRLTTGILLCSTNPETRATYQQLFQHRAITKRYIAHVAGPIPFGPQWTEIALGMRKMGPR--VVVDPTGTLTRTRVRRLEEG-----VVELQPATGHTHQLRVLLAWVGCPIIGDDTYPVDRRRriyDFSKKLELYATSLEFVDPVSNVTRRF------
>UniRef50_B8LC17(75-281:341) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC17_THAPS  E=8e-30 s/c=0.64 id=36% cov=89%
------LPPFEVP--VVYEDDHMAIVNKPSGVVLYRAEGGRGGGARDEDTPQNVPlkRPQPVHRLDRPTSGLVVVAKTKLAAVHLSQQFEFRKAEKTYVAIVNGIPRQ-SGVRAEPMQWNTIDY------DLEEKTAVTRWRVLRkvkslHGNDGTlTLVEMKPKTGRYHQLRRHCAWVcNSPLVGDTTYdgGSEGALRLRKRgLFLCSSEIALEHPHYNTP---------
>UniRef50_Q6F9V8(95-298:304) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V8_ACIAD   E=1e-29 s/c=0.64 id=26% cov=91%
--------------SILFENHDLLVVDKPHFLTISPT-GKYVQETLLVRLKQQTGNEdlTPIHRLDRETAGVVLFCKRPESRGIYQTLFAKREVHKIYHAIAAYNPLITFP-QTLRLCLEKGNPFYTMQVNPNGQvNSETRIECLAHNQQ-WAKYRLSPSTGKQHQLRLHLSFLNIPIKNDPFYPvveHKADDDFSAPLQLLAKELSFFDPITQSPLNFKS----
>UniRef50_C7R188(122-344:362) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C7R188_JONDD   E=1e-29 s/c=0.59 id=26% cov=95%
------DPEPEVPFacDVLFEDDDLYVIDKPHFLASTP-KGRYVTETALVRLRKDtgNPELSPAHRLDRLTAGVLVFTKRRELRGAYQELFAQRQVTKVYQAVAPTNPAvDLPATVRSRIVKEHGIMRAHTMPGEPNTEtlvtltdTATLPAGHDVAVQDVGLYTLYPHTGKTHQLRIHMASLGLGIVYDNYYPDFyhvESDDYRHPLQLLSSQLAFTDPLSGVQRDFRS----
>UniRef50_Q6MKN0(84-282:283) Putative RNA pseudouridylate synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKN0_BDEBA  E=1e-29 s/c=0.66 id=33% cov=89%
---------------IVFENEHFVVTNKISGLPVHASVDNLHENLQSYLQQTLHQNVYVTHRLDVPTRGLIVYAKSPEFQTEFNKLLIAREMNKIYRARVQGH-SLSTGLLQHYM---EPSPRAPKVVSKELQPKWQECllEILEFSKleNEMSEVRIKLHTGRTHQIRAQLSAEGHPIVGDVAYGAVKVWDE-ERIELEACELAFTNPLTGEHHEFK-----
>UniRef50_A7RM79(25-286:330) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RM79_NEMVE   E=3e-29 s/c=0.50 id=26% cov=93%
---------------VIFSNNDLIAINKPYGLPVHGGPGVVLSVAELleefAAIKNYQNKPELAHRLDKygtdytimliDCSGVLLLTRNKTAAQKIAEMFQSRMVKKRYLAVSVGVPRYEEGTISIPVGYGRVGPWERIIIRQDlvgkthkeiteagFKQAITKFKILDENQSTCSLLEIEPITGHKQQIRVHLAdALRCPILGDHKFSSDKPqpqviplrllqllqisgvkgvdgkkgrirpwQRGQIPLHLHSHQLVLPKYHTGSDLVISAPLP-
>UniRef50_C8RQ24(49-261:297) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RQ24_CORJE  E=4e-29 s/c=0.61 id=35% cov=89%
-------EPEELlaaDIPVLYSGSDAVVVDKPHGLPSTPnGRLLRATAQSLMRVRLQEPELVAAHRLDRDTRGLLVLARNPVTRGFLQTQFQRREVSKTYQALAADIPEigSQWQDVQLPMLKIKDDPQVKVVDGERSRLTVTRIRKLAssagaearpveatRAGTPTAVYELQPLTGYTHQLRVLMNHLGAPIYGDDTY--PEYRPGAGALRLRAVAIEL-----------------
>UniRef50_B0SSX5(17-209:231) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SSX5_LEPBP  E=8e-29 s/c=0.67 id=28% cov=88%
--------------QIFYECDDFLLAEKPEGIPVHETKDPSRMDFTRLLSNHlQIPELRTVNRLDLGTSGIVLLGKNKNKNVELDLLLKE--AEKTYIFLCDGIPSWREHRMECFL---KEGNKQVNLVRSGGKKAITEFSILHSDPnESISFGFAKILTGRRHQIRVMLSSLGFPILGDTVYGKKE--KTETRMYLHSFRFYFTDFLGQKQMV-------
>UniRef50_C3XV24(72-316:335) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XV24_BRAFL  E=9e-29 s/c=0.52 id=32% cov=90%
----------------LYDEGDIVAIEKPYGVPVHGGPGmgvsiADSLPLLQQALKTD--RLYLVHRLDKETTGVMLLAKTDDMARQLHSLFRLRKVIKKYWVLTMGVPSHEEGVVDIPIKelevtaqgrphhrmvcvpeysEETKLIVKKKRKSSDAQIAITNFRVLDSCG-SCALVECQPETGVKHQIRSHLSYgLGCPILGDHKYshhsklapqrlptgmlerfGIQQPKARYLPMHLHARQIVLPGFRDGRSLYFTA----
>UniRef50_C4Z1D5(2-212:225) Pseudouridine synthase n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z1D5_EUBE2  E=1e-28 s/c=0.61 id=29% cov=87%
-------------LNIIHETKDIIIVNKPAGQLSQGAKGFDldlvSEVMTYNASQGKPAYAAIINRLDRPVSGLVLIAKNKSAAAKYSTLMQKeGGFNKQYEALICGKLSESKGTFVDYLKKDGRTNTSAIVPADaaandkEAKLSKLEYEVISYDEvKDITHVRIHLITGRHHQIRVQFASRRHPLVGDYKYATADCGmdnavkavaFKRNQIALCAVSLTIE----------------
>UniRef50_C8PJZ2(74-459:495) Pseudouridine synthase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJZ2_9PROT  E=1e-28 s/c=0.33 id=35% cov=93%
--------------EILYEDDDLLVVNKPAGLTVHPAASVKEPTLVDWLKSRGYllstlggeLRAGIVHRLDKLTSGALLVAKNNAAHAALSAQLSDKSMGRIYLALIDLPLKEPC-VIERPISRNPANRLKMGIV-PGGRSAKsafyeilsgaeltelqnsaercdeilgagdgtaanasasrisTEEKILGDAMDKIStgdankisavstgkdkilnasrdadaskilathasanpnagtdkilnnradnvdeisnncmqsadkiliqsadkipnnradnadkiltadmsadqtqtarlaenkalnfknpaqnyklppinlksfnLVAAKLFTGRTHQIRVHLSSINRHILGDHLYGFKSENAKISRILLHAYLLYFIHPRSGKEVKICAglPSEF
>UniRef50_B5JQE8(5-182:194) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQE8_9BACT  E=1e-28 s/c=0.72 id=31% cov=70%
------------------------------------------------------------HRLDRLTSGVVVLRKGRRFVKELAGQFESRGVRKEYWLLVDGLWDRRIQKMESQIA--SIGRGKYANVESGGKAAASTFRVLGLDEErRVSWMSGLLKTGRTHQLRLHALKAGCPVVGDPLYGKSRDDGLFG---LHARSLRMRHPASGEELSFEAEPP-
>UniRef50_A9GNR7(134-341:368) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNR7_SORC5  E=2e-28 s/c=0.61 id=29% cov=88%
-------PDPSAPLDVVLERDDLVVVNKPAGVPTAPLHPGERG-TVANALVARYPEMagigfsprepGLCHRLDTDTSGLVLAARTAAAFAALGAGLKEGRLDKRYLLICQIGDLPEMGSIEVPLAPHPKDKKRVYpcihprdVARYAPRPAATMYKRVRQVGL-WELVEARAPRALRHQIRAHFASVGHPLAGDVLYGGPAVE-GLSRHALHAHYIG------------------
>UniRef50_D1J3S4(187-384:476) Whole genome shotgun sequence of line PN40024, scaffold_180.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1J3S4_VITVI  E=3e-28 s/c=0.64 id=35% cov=76%
----------------LYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCsepPRLVHRLDRDSSGILIMGRTQTSATILHSIFrektfgasnndidtKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKseritivDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEvLGTPIVGDYKYG-------------------------------------
>UniRef50_A9SET3(55-309:327) Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SET3_PHYPA  E=3e-28 s/c=0.50 id=27% cov=92%
--------------SVLFEDEWLIIVNKPRGLYS--GHVFETMPSLCSSSGETPLHLHMANRLDRDTSGIMIITKCKVAAANLTRSYMNRKVHKTYIAQCAQsQPTWRKSRIESGHGRSRYGAWHVYAKHDIGRRLPVKTETVREMitrleivsgpdslrwdnelsvehdclevivgsedevrlvsnevtkrcsdvDEEVTLVRAFPETGRTHQIRLHCQYLGLPLCGDVKYGGPlfWQSVHYDSHTLHAESLALRHPMTNQLLQVVAP---
>UniRef50_A9RZN1(1-265:283) Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RZN1_PHYPA  E=3e-28 s/c=0.48 id=35% cov=85%
------------------QDAEIIVINKPSGLAVQGGSDvVKSLDSMMEAALSYNYNEGPrlVHRLDKETSGALVLGRTHQSTVFLQALLRNKTEKisqapgRCYLALVIGVPEKKEGRISAPLAKvvsDSGKLDKMRVVhgsHPNAQEAITDYKVLgSSLFAGCSWLELRPLTGRKHQIRVHCAEvLGMPIVGDYKYGWRALRLWPptdrtedtkssvlglresghvwsskPYLHLHCRQLILPD---------------
>UniRef50_Q7PQ70(44-272:300) AGAP004401-PA n=4 Tax=Culicidae RepID=Q7PQ70_ANOGA   E=3e-28 s/c=0.55 id=32% cov=96%
----NYKKKDE-TVDVLYTSGNFLVINKKHDLLI--NSNDTKKKTVQTIMRKQFPEYvqdnlthdfYFAHRLDFATSGILCIPLNKNACKEVCQVFEEQRARKYYLALLRGHTDFDEEVIDIAIGEDvrfKDTSKKMCTILEDelcqnPRRSITKVLVLDrgyYNGKPVTKVLLRPITGRRHQLRLHCSQIGHVIVGDYTYSLK-IDTSPPRMFLHAFRLVL--PNTIENLDIQTDDPF
>UniRef50_C7H3R7(118-344:365) Pseudouridine synthase, RluA family n=3 Tax=Ruminococcaceae RepID=C7H3R7_9FIRM  E=4e-28 s/c=0.56 id=26% cov=94%
-----------PKVTVIYEDENIAVLYKPTHLLCHSDRTGDanLVDAFTQYLAqkgeydaggENRFKPGICNRLDRGTEGLVIAAKSYAALRDMNEIIRTDLLKKEYYTITVGIPQSGRFTawWEHDEKNNKVSIHAHQSQDERRKQIITDVDVL-RTAGPFALCKIGLVTGRTHQIRAHLAYLGKPVLGDIKYGNRKmnERTGTRTQALCAVRISFLDiPeenslryLSGKVIKLKDP---
>UniRef50_Q14NQ9(83-289:312) Hypothetical rna pseudouridylate synthase c protein n=1 Tax=Spiroplasma citri RepID=Q14NQ9_SPICI  E=4e-28 s/c=0.61 id=26% cov=89%
-----YNNVETLPLQVVYEDDNILVVDKPHGVEMY-SKFHTSLDAMVQHYLIQKHEYHPedeqsfvishVHRLDKLTRGLVLYAKNKITLDLLLAKINQKEsIEKKYLAKCEGIIKETDFTLTGYLYKNEDKQKMvfTKTVQPHAKVVKTHFRVQHQLT-NATWLEVTLITGRKHQIRASLSYLHHPIVNDIKYGAKQ-ETKEYMIVLYATTLIF-----------------
>UniRef50_C1E1G0(27-296:327) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1G0_9CHLO   E=7e-28 s/c=0.47 id=34% cov=92%
---------------VLHRDADVLVVDKPAGVPMRSVHGVKGVDAFLADLRFDLAHpPMTVHRLDRDTTGCLILARTREAQRTLAGYFQDRarvarrgsgrstkttspeslgDVRRVYWALVSATsTLASRGTIDAALV--TTHAGVTLKPGAGAKPAATDYEVISRASPDScaptaagrvpAVLALVPRTGRKHQLRVHCAgALDAAIVGDYKYGyrdvsrtggvaddwrrvlrdiderstrrlndagtaDGEVRGAGVPLHLHARCVEFTHPSSGERVRVVAPAP-
>UniRef50_A8SPE4(90-307:334) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A8SPE4_9FIRM   E=7e-28 s/c=0.58 id=28% cov=88%
--------------EIIYHDHNVLIVNKPVGVLSQKASKDDYSinESVLDYLLDNGyitseqlrtYKPSICNRLDRNTSGLVLCGVSLMGNQELSRIIRERNIDKYYYTIVKGHIKSVQDVtaylvkdekKNTVIVRDGVDEIKQDSGKNEFEKIHTIFEPV-RSNGKYTEVKVKLITGKTHQIRAQLSHMGYPIVGDQKYGDRETNIYFRQtyklrnQLLHCGEVKFTN-VTG-----------
>UniRef50_C5C8S8(80-341:348) Pseudouridine synthase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8S8_MICLC  E=7e-28 s/c=0.48 id=31% cov=96%
--------PDEAPLPVthtlLHRDEHLVVIHKPHFLSTTPgGRFVQETALVQLRNELGLDDLVPLHRLDRATAGVVMFSANPATRGAYHLLFERRAVAKTYEAVALLPDAPDDGargpgtpadpvlgrfplTVRSRIRKDKgvlrsvveeippaasgrragaPVRTRRSNRPHAGANAESRVELLGVgvsagtlAGRRVAHLRLTPRTGRTHQLRIHLAALGLGIAFDPFYPdllDLAPDDVTQPLQLLSRSLRFTDPVTGEEREFTSPA--
>UniRef50_B8C2A6(272-592:596) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C2A6_THAPS  E=8e-28 s/c=0.39 id=41% cov=92%
------------HLQTIYFDKDIVVTNKPSGLLCVPG--VNHYRSLLDLVYEVYggganpndkgisttqqttdesatttleeplqKDSMIAHRLDMDTSGIVVFARTRLAMSKLHKSFRERTgTRKRYEALLVGWLDTATwassannssnnnylgcnagdttadtdlggGEINLPLQRDHKHPPFMRVstpeseveaamavrdlnhagwkklVAKRPKPSTTQFRILAHEvwmDHPITRVELTPITGRTHQLRVHCAAIGHPILGDPAYGwcgeahpnggfceevmrqmsptcagmelqrdvEESVQASGRTMCLHARRLGFHHPATDKYVEFEA----
>UniRef50_B6WPU4(100-303:335) Pseudouridine synthase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPU4_9DELT  E=1e-27 s/c=0.61 id=33% cov=88%
------LPPAPRPLQ---KDGDLWVFCKPAGLPTHPGTG--HEDSLSSRLAAGagdaPFKPTPVHRLDKDTSGILLVAASFAVLREMTTALRERRMKKEYLAWVEGLWPHSGVRLFRHWLRKEagtGNGREQMHVRQTGAPDKGETEALllvrpVRVEDRRSLLLVRLLTGRTHQIRAQLSSLGHPIEGDVKYGAR-GRASGTPMYLHAMRVILPD---------------
>UniRef50_Q98R93(78-279:282) RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE C (PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE) n=1 Tax=Mycoplasma pulmonis RepID=Q98R93_MYCPU  E=3e-27 s/c=0.61 id=26% cov=89%
----------EQKFNVIFEDQNILVINKQAGVSMHSdeNSLDKQVLSYLNFKQVDSFVPSSIGRLDKVTSGVVVYAKNYSILKT---LKSNEHLRKTYVFMSNITLEPNQKIEHVFYHKYNPIKKKAELFKENVEESKITKTLLYKVKNNNY---AELITGRKHQIRATLSKLGFPIFGDVKYGGKKD----KRVYLHSYKIKF-HSLKGEfeylnNQEFIAP---
>UniRef50_B7APK6(4-187:217) Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APK6_9BACE  E=4e-27 s/c=0.67 id=29% cov=77%
--------------DIIYEDDGMIICRKPAGVLAQGSRsFDADMVSMLMtyrRKKGEDTYIGVINRLDRPVEGLMVFAKSSRDAARLNRLMQQDTFNKTYIAVVWGCIDAVEGTLTDYLVKDAGNNTSHVASegEPGAKRAELNYRVIGSL-DGMSVVRIQLVTGRHHQIRVQFASRGHALVGDAKYGS------------------------------------
>UniRef50_C1ZMD6(196-385:400) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMD6_PLALI  E=5e-27 s/c=0.65 id=31% cov=72%
-------------------------------------------------------HVRAAHRLDRQTSGLVVLSRVPEAGAKLYAQFQAHDVLREYEALVWGWIEPQRLESELIRDRGDGRRGSRQPVtmleagaedspaanpLPAGKMAATNL-VASRQGHfksgtgelaPVSWIRCQLETGRTHQVRIHLSEKGNPIVGDDVYGT-HSLDGVPRLYLHAARLGFIHPMTGKRLEFS-----
>UniRef50_C1E8M2(24-241:279) Predicted protein n=2 Tax=Micromonas RepID=C1E8M2_9CHLO   E=1e-26 s/c=0.56 id=33% cov=89%
--------PEDLPrLEVAHEDAHFAVVVKPEGVNTVGdARGGWTAERMLPYFLAPtigvegaLVRPRPVHRLDALTSGLLVVAKTRLAATSLSEAFASRRVTKRYRAVLCGTPAEPEVLVDDDDDDENDRAGAAALKLGvidapmEGKQCVSHWRVVRDAPDasmrhgRLTLVDMWPKTGRTHQLRRHAAgALGCPILGDARYNPKHSpEDDVDGLFLRAVEVTLP----------------
>UniRef50_A4S7H5(47-309:318) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7H5_OSTLU   E=2e-26 s/c=0.46 id=30% cov=93%
----------------VYVDDDVYVLNKPAQTYVHdierlvergmvkcdDATTVDNRATTRDVPFNASESARVVHRLDRDTSGCLVVARNRDAIRSLSAQFADGTVQKTYVALCaatadydgvedHRRVFTGWGRAKYGLFRlyDAADIGRALPGNKKVKVKHAETTIIvervitdgvalrfcepptaddaDRRRHRVALARCSPLTGRTHQIRLHCASLGLPLVGDVRYGGPiaatrdgpiDAPFSARRVAgalLHAERVAFRHPKSNLRVDVHAPRP-
>UniRef50_C0QC81(75-268:295) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC81_DESAH  E=2e-26 s/c=0.62 id=29% cov=80%
---------------------------KPSGMSVHNHPGSDllcvlerqiraDEDLMVALGAQEGFQIHPVHRLDQETSGLILVATDPDRLRYLSNLFQQGAVQKHYIALVHGNFDPPCdpfQVWDTPLSKQAGGRTDPRGKGKRVR-SETRYRIMDQSP-HYTLLEIELVTGRKHQIRRHAKLAGHPVTGDTRYGSKrsveflRENHAYDRLGLHSFKIEFI----------------
>UniRef50_B8BWY4(2-175:175) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BWY4_THAPS  E=3e-26 s/c=0.69 id=41% cov=69%
----------------------------------------------------------VVHRLDRDTSGVFLLARNDEALKTLHDDFKDKtrgRVTKRYVALVCGHWNSDNascvadrmttdeGEIDLPLVRDIENPPFMRVATTGNEIKL-----------PVTRVELQPITGRTHQLRVHCAAMGYPIVGDSIYGYGGEGSPREGiemdedeclLCLHAQRLTIFHPLTKAPMMFECSPPF
>UniRef50_B7FVV1(198-424:424) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FVV1_PHATR  E=8e-26 s/c=0.52 id=33% cov=87%
--VLNYKKP-PFELPVIIEDDHWALVNKPAGIVVYNQRNGGHGImTVRAALPFvlappkvgtisVLRRPASVHRLDKPTSGILCIAKTKPAMLCLSRQFHDRIVKKTYFAVINGIPTysneskissKTAYELGVDVDPNDLDDWQLIDSPLDEKKAVTVWRVvrsiksLHANDGYLTLVELKPKTGRYHQLRRHMAWVCqRPLVGDDEYDGGTESAMRFR---------------------------
>UniRef50_C4XKF0(88-262:290) Putative pseudouridine synthase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKF0_DESMR  E=2e-25 s/c=0.67 id=27% cov=79%
---------------------DYVLLNKPSGLHS-AALAQGGGESVEALLPDIFPGRpsFLLSRLDSLTTGLLPAAFSPEAAATYRDMEESGEVDKTYLAVGHGEPDVTYFRCDGEL--DAADRKKTRVLDRATIDSLRMTEVEAlETRGGVTLFRCTIKKGARHQIRTHLAWAGHPLVGDPLYGQGEGE----RLFLHCAGI-------------------
>UniRef50_C1N0H2(110-363:497) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N0H2_9CHLO  E=5e-25 s/c=0.46 id=29% cov=83%
-ALHRHEPPTlDRPVEVIAVADDLVAIHKPATMPVHPT-GQYRKNTVLGYLaahRRDLGKLFPVHRLDKNVSGLLVMARTPTTANAMRTQVEGREVSKEYLALVTMKIFNAGGnaetvaaaaltafareegtdvfaaRCDAAVAYDERARVASCDVSvaDGAKDASTAFELVARGewgvgggdgggdggsacpfedvvvrgglPRRALLVRCRPTTGRTHQIRAHLSRLGWPIVNDVKYGG------------------------------------
>UniRef50_B5JF54(11-238:244) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF54_9BACT  E=1e-24 s/c=0.50 id=32% cov=88%
----------------------LLAIEKPAGVLSHPNKKGEKAKALLDAGYDEKRQAYSVldtesgetrlvyllNRLDSATSGIVLLALEEGTAKAALKAFETKNVRKTYQALVFGAPRGGPPLWRDRLSVKHAEGG-VRASAGGGLSAETKLVKVELLPGVplVSRLTLMPITGRTHQLRIQTSKRRIPIVGDRTYGDFQKNKMAakkgmKRLCLHCVGTELQYQLSGRSFRFKA----
>UniRef50_D2VX88(11-249:272) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VX88_NAEGR   E=1e-24 s/c=0.48 id=30% cov=86%
-----------PNIPIIFKSRDVLVIDKPNDLHI----DGDYELTVEKLINNYYPEMEnpleeiqhkpghtpsrrklkFCHQLDYATSGILCLAFTRESCAKITYPFQQRTAQKQYLAVLRGHVLINDFEILTFIGEDPSDERKFRMRnfylgrektllselnteeeiqeAKKSRESLTFGSVLCRgfyhkdnDTIPVTKVLLRPKTGRRHQLRLHTQLLGFPILGDATYSllGRDGEEGVHRMMLHAWNLTLP----------------
>UniRef50_B3PLS7(78-256:277) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PLS7_MYCA5  E=1e-24 s/c=0.64 id=24% cov=81%
----------KINFKVIFEDKNLLIVDKAINIAMHSeeNSLDDQILKYLNYRLTSSFRPASIGRIDKKTSGLVVYAKNYAALVEFEKQ--QKYFDKVYQFVSDFNEDKLDITVN---LKKDIGNEKMIVDPKFGVKARTIFWVDGKHK------FAQILTGKTHQIRATLSYLKYPILGDSKYGGKR----AKRLFLHSYSITF-----------------
>UniRef50_C1MIE2(196-531:547) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MIE2_9CHLO  E=2e-24 s/c=0.34 id=37% cov=94%
-------------LEVIHEDDAILVVNKPPGLRFHPVHRFE-GNSLLSRCIGHirrrrrrrrrasddggedggedadadgeekvdddedahaDDMPHIVHRLDMDTSGVCVFVKDKSLVDGFARQFRgdDAGVKKEYVALavgtvprgdvvafsseaeevrdddddaaaaaaaaavgrafvvdahigDHATMPEARAVHPPPLVASTTRATDPSADASAPKPATTACVVSSSAAARdglvAALVRCAPRTGRTHQIRLHLALANLPILSDPLYGPHvrfggaamaenargkaggeeedgggggdrgyfaaelegywGGDLWLGRQALHAASLTVRHPKTDVSMTFRAPLP-
>UniRef50_B5IKI7(75-326:350) Pseudouridine synthase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKI7_9CHRO  E=3e-24 s/c=0.45 id=29% cov=95%
-----WLEPAVPDLPgPLFDDGDLLVLAKPAGLPVLPAGGYLEHTVLRLlerqvragRLDGRFGLPRPVHRLGRFTSGLLVCARRRASRAWLSALLRDGTAEasravplelqemvgeapaacrKLYRALAGPLPVSGPGalelgetlRITTPIGRRPHQRLgeVWSAGGRNALPALTTITLLERRGHGC-LVEAAIGTGRPHQIRIHLAAVGAPLLGDPLYRpgggvNPGALPGDPGYRLHAHRLTLPWPP-GQRLALE-----
>UniRef50_A9UZH2(118-333:512) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UZH2_MONBE   E=6e-24 s/c=0.52 id=31% cov=85%
-------------------DPFVWVVNKWAGLVTQ---GEKDGQSLAAYLKYMRMRHdddmrlltrplSLVHRLDRNTTGVSFIARNPVVHALLQDVLATHQAQKIYYATTLGVPFPRKGEIKGYLTPHKNGVKLDATPQnKNSVFSHTRYQVVDALDREAALVRLEPVTGRRHQLRAHLAQgLRTPILGDTQYGVGCSNALRPllfptkgrpstkvvveglPMMLHAFELVIPDYAT------------
>UniRef50_B2RHT4(80-297:324) Probable RNA pseudouridylate synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RHT4_PORG3  E=6e-24 s/c=0.52 id=23% cov=95%
--------PEElrhPLVRIIWQDDYFVLIEKKAGVSTVASGVNKDRTALRivsDHLKQYDPEvkIFMLNRLDKDSAGMVLFAKNKEVQGFVVDKWSKVVLEQRFVMAIEGEMPDAEGTLDPPRYQTSIKGKQSRIVAETPSVHSvgTARYKVIRRGAVCSLVEVTLLSGRNNQLRRQMGQLGIPIAGDWRQGS--SFRHLDCLALQGTRFVFRHPETGDTQEYKLPLP-
>UniRef50_D1UAP7(72-279:289) Pseudouridine synthase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAP7_9DELT  E=2e-23 s/c=0.53 id=29% cov=90%
--MADLMPQDIPELRVVERTDLFAAVYKPGGVHS-AAIAGKDGLSVEAALPALFPDAAPVllNRLDFPTSGLLLVALGPDGAETYRASEEAGGVRKFYLAVVHGRLD---GMISVRNRLDTDDRPRTRALAEEDADARRWTSVNALAHDHdrdTTLVRCLIMKGARHQIRAHLASLDHPIVGDTLYGvpdaatGGEEIGSGPLLHLHHQRIELP----------------
>UniRef50_C9N1D6(103-316:328) Pseudouridine synthase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N1D6_9FUSO  E=3e-23 s/c=0.51 id=20% cov=85%
--------------MVIFENDDFFIVNKKEKVPMHKGTGHKYGLAEVFKKIYKSDNINFANRLDFETSGLVIGCKTLKFLRYISQKIRDNEVHKKYFAVVHNKniirrnklerekfnledfkienylttLENKVIVSENPVSRESKKSITYfkHVNFNKLKKSKEILKLFEKNNKNILLLDVELITGRKHQIRAQLAHESLFIVGDKKYG---IKDGSDRFFLCCYSISFD----------------
>UniRef50_Q6F0Q2(102-303:323) 23S rRNA pseudouridine synthase n=1 Tax=Mesoplasma florum RepID=Q6F0Q2_MESFL  E=3e-23 s/c=0.54 id=22% cov=86%
-------------IDVIYEDSNLLIVKKPYNVEVHSPVKTSMDDIVKNYLFDTNQYNpseensyviSHIHRLDKLTSGLIMYAKNKQTHDIMVEAIQDKEkIEKYYRCRIDVPVTESL-IAKGWIKYDPIIQKSVFSEefRSDYKEATTIFNVVSLDVTNEqTELEVQILTGRKHQIRATLEYYGASIINDSRYSGTIINNE-KMIFLFANKLVFN----------------
>UniRef50_Q38EM9(999-1217:1279) RNA pseudouridylate synthase protein, putative n=4 Tax=Trypanosoma RepID=Q38EM9_9TRYP  E=4e-23 s/c=0.50 id=29% cov=83%
----------------------VAAVDKPAGMSTTLHVGHPHLLDFLAGNLPWkgpsapvLFQHGLVNRIDLGTSGLVLVADTEASLEEARRAsIVERCVEKVYRALVLHCPPPISRIDTSECWYLNPCGIIMCDVLANGadfslqiaaynsskggalpvgamdrRSATTTYRVLQYFPrSGVYYLEIHLHTGRRHQIRQHFARLCHPLLGDGRYSRRAqvvgEEFGLQRPALHAVRVTLT----------------
>UniRef50_C5LRC8(120-374:439) Ribosomal pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LRC8_9ALVE  E=4e-23 s/c=0.43 id=28% cov=88%
---------------VLHETKHLSVIWKPAHWHVsvtsaiagaaegevddatdeeaeakdaafkTMTSANGNASGLQEWVeeaysgypiaRDRHHAHGILHRLDVGTSGPLLLAHSYKGFYMGRLVFCSHQIDKEYVALVKGHMgtvgKNIVISDRIKILKSTLDNGQsystTCVVAPDGKPSLTEVVPVAHYNDGsgeeYSLVLVKLHTGRTHQIRVHMAYIGHPLVCDPKYGNPTdpeaakavcaiDRLWCPRTFLHSYRLCYNQPM-------------
>UniRef50_C2MA71(86-303:341) Ribosomal large subunit pseudouridine synthase family protein n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA71_9PORP  E=4e-22 s/c=0.49 id=24% cov=93%
---------QHPLIEELYRDEQFIVLHKRPGIPTI-SVGGASKSSLFQVVTHHLKkvdpneKIFLLNRLDRDTEGIIIVARDRQLQQDLLAEWHSFVLFNSFEAVVLGALDTSSGELTTRPTKDKKRGSdKRRTSTSSGRDKKPASFRASYEvlstGPYITRLSLSLLT-RNNSIRSTLASIGHPLLGDHRANDSIAPDLSKYLALRATELAIFHPIKRQKMLFT-----
>UniRef50_Q25346(166-390:413) Pseudouridylate synthase-like protein n=7 Tax=Trypanosomatidae RepID=Q25346_LEIMA  E=1e-21 s/c=0.47 id=25% cov=94%
--------------MVLFKNEHVIVINKPSGVPIMPTHDPlamNITDLLPAWRYTNTQTPVICHNLDTETSGCVVLARSANTHRMLGRMFVKRVVPNsVYWGFAVGKPPVNFGRIRMHFEVQKGQGGDVIVARPtptaDSKVGIAEFVVNASALEFGSFISFYPLTTRRHQERIMAAHaLRAPLLGDAKYGGESAFPHSlslfwdparkdVPLHLHHRKIQLPYKNGaGEFVCVTAPLP-
>UniRef50_C1MYF0(65-420:443) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYF0_9CHLO  E=2e-21 s/c=0.29 id=33% cov=94%
--------------MVLYRDDDVLVLNKPSGLPVVGTGTGNanaaapSLSAMLASLTFHadapwKPPLTIVHRLDKDASGCVVLARRAVAARTLARAFAAKSasggegareeeeegllgggraesdalynIERTYWALVAGRPSRDEGVIRAPLRipgkRNGNTKRRDGGVvffaddatderrarlprppdvapgggggasegrveattedDPRGVRAVTSYRVIgevprdadgddgdddeKVTHPRPTLLELTLSTGRKHQIRVHLAsALGTPVVGDYKYGYRDTPRTRRgreiappawmealrdveaaarrgsgtirdpasaaawrarrslaladddgggvPLHLHARSLRFPKPSGGDVVRVVAPLP-
>UniRef50_C4QP03(44-300:370) Ribosomal pseudouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QP03_SCHMA  E=2e-21 s/c=0.40 id=30% cov=87%
-------------LRVVHENQGFLVINKHPELLINCTTPWINCLTLQMQLFYNRPRYvnwklknmfHFVHRLDCPTSGLICIAYDTKAASMIRRAFENKEVKKYYLAIVWGYVGSFCDSglsssfvkhesklvhhiqmsigSFRYLWPNTGRKQKIIVPITHpecyrPRESLTTVIVLDYGklmGEPATHILLIPETGRRHQLRVHCAiGLGHPIAGDTTYVRRPfdhpnivylndiytmhnvnLDYKLKHMMLHAYTMKI-----------------
>UniRef50_B9QFU8(2025-2204:2273) RNA pseudouridylate synthase domain-containing protein, putative n=4 Tax=Toxoplasma gondii RepID=B9QFU8_TOXGO  E=2e-20 s/c=0.56 id=28% cov=70%
------------------------------------------------------------HRLDTPTSGPLLVAKSYAGLAFLRAQLASWRPKKVYLALVFGAVPLREKVRLVHPLRptfeagKTGKKEMEVANTVDAKIALSFLSGIthySYGGRDFTLCRVEPVTGRTHQIRAQLAHIGHPIVADPIYVNDPAdralgRSLSDRVFLHCVSLSFLNILENENRT-------
>UniRef50_C3JBT0(84-292:330) Ribosomal large subunit pseudouridine synthase family protein n=2 Tax=Bacteria RepID=C3JBT0_9PORP  E=9e-20 s/c=0.47 id=20% cov=91%
--------------KVLWQDDWFILVQKEPGIPTIaskPGDRHTVYRIVADHYKSGDARekIFLLNRLDRDTRGLILFARDREVQQEILDNWEKYILSQTFSALVEGVVPEEKGEFAPPPKPKKTVGDKDTKKKVVVSRRSRATYLVEERGQWRTLLRISLL-GRYNGIRSQLNEKKYPLVGE----SKGVIKGAPSIALSQQELVLLHPITKEKLRFESPIP-
>UniRef50_B8BXJ8(103-270:383) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8BXJ8_THAPS  E=4e-19 s/c=0.58 id=31% cov=72%
---------------ILY------CINKPASVPVYPS-GPYYSNSLLMMVEAQeglpPKSLVPCHRIDRATSGVLLCTIDSKVSRAVQGRMASRNevgtqhpIKKLYLARVQGKFPDPSSS-----VPVGAASMMHRSVSRDGKQAISRFRLLSYdAATDQSLVSCCPITGRGHQLRVHLQFIGLPIHNDVEYGG------------------------------------
>UniRef50_C1M2U8(543-761:875) Ribosomal pseudouridine synthase, putative n=2 Tax=Schistosoma mansoni RepID=C1M2U8_SCHMA  E=7e-19 s/c=0.44 id=31% cov=76%
--------------------ENVIALNKPRGIASQPGADCKHNIVdLLPRIeslirkrnhhgkgeEKYIGELSTVHRLDKDSSGIILIARNKDSALKLQEAFSRRWIKKDYLCITVGIPRSDYGYIQLPLVERNFNGIRKMctpqlnrrlqeltckqtqldidneaneydvtdaftVLYDKMRTNnnqPTTWYNLIDKQNNAALMLCSTLTGIKHQIRAHLAfGLHTPILGDHKYSHAE----------------------------------
>UniRef50_C5DL01(4-189:234) KLTH0F08866p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DL01_LACTC  E=2e-18 s/c=0.51 id=24% cov=76%
-------------INLVYEAKNYVIANKPPGVFCQPpdrnvwyNAQYKEPPILLELLKSQastrAAEWRPVHRLDTNVTGGVLVAKNKNAAAMFSRHLKKGgnhgyKLTRRYVALVEGNTAELPDT---------------GVISENGRLS-------KFKKAGLHVLVLQLCTGKKHQIRQQLsQCLKLPILNDLKYGGRQITGAGRQIALHSALI-------------------
>UniRef50_C8X3G8(89-278:285) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3G8_DESRD  E=2e-18 s/c=0.50 id=26% cov=71%
-------------------------------------------------------RPRLLNRLDYPTSGLVLVALSQGAFDQYQIWQDEGRVRKTYWAEIHGEWTGPELLKWR-IETAKRKRVAVVFEPDPDPLRWTHVRALYRIAPGRTRVEVVIAKGRRHHIRAHLAAAGTPIQGDSLYG---EDSPSAPLYLH--HLRVHMPG----FTAETPPPW
>UniRef50_C1FHP0(248-561:730) rRNA/tRNA pseudouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1FHP0_9CHLO  E=2e-18 s/c=0.30 id=34% cov=80%
--------PDPSPLHVVYEDEWLMAVSKPAGVMTYPahrlrgesvvSRAVHHLSVSAARRRGRLPyssedlpeesgvgtpvgtpggsfagawtssqvEPIAVHRLDLETSGVLLLAKDKRVASELQAKFEARGVRKTYLAVCavledaeahkatatrrvdfeadVDTDVDSDADMDADVYADtdgdelgvfdesdldddddddayedpddeldeldepgvvrvvnaaigdpepgtrrsaaaDDGGRCVRAVTPDGKPARTEYQclssrlgvptqvtmpdgVTRRTVVGTALVLARPLTGRTHQVRLHLAHAGFPIVGDGLYG-------------------------------------
>UniRef50_B7G1Q0(180-423:607) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G1Q0_PHATR  E=4e-18 s/c=0.38 id=24% cov=87%
---------------IVAEDTDkgWLVIRKPSMVPVHMT-VDNCRENVADCLKQARAWQSPtadardvyittPQRLDQNTSGLVVVATHKPFAAYFASLLRSKTarqlsgdgddrnheslgsVHKLYRCLpsirapkrFVEHPPDDTQWPECLLKIVKVGNVCELVGSPAGqdlaealwQDASGQAKRIPPQAKAVVEVEIELLTGRTHQIRGQLSTLGFPLVGDAQYGGAVPRNPTNeqfyigteQLALQCCELAFRDP--------------
>UniRef50_UPI0000E499FC(86-287:373) PREDICTED: similar to RNA pseudouridylate synthase domain containing 3 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499FC  E=5e-18 s/c=0.46 id=30% cov=76%
---------------IVYQQDGIVAINKPPGLGVSGkvNEDDESSPLTLSSMMSqvadftDCPSAEIAQGLEKEASGLLLLAENRMAAKKLQSKIKEarnrRQFIKTYRSIVCGIPETKIGVSKMYLGSDvigginmtvgRHNPSGRQIRDGDVWSAETKYRVISENKElGCAFIELQPLRVKRHQLQVQMVNDLCPILGDHTY--------------------------------------
>UniRef50_C1SGK2(54-226:248) 23S RNA-specific pseudouridylate synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGK2_9BACT  E=1e-17 s/c=0.53 id=27% cov=76%
---------------IVKEFDHIVFFDKPAFMHT-DLQKPDDPITMTDVIMAYSNEFSFISRLDYTTDGVIAAVRDD---------FFVFETRKVYLAHVEGKIEKPFVMDN---LIDADKRRKVRVLEKPGGYKTTFTPV--SFENGLTLVRAEMENASRHQLRAYLAHKGHPILGDELYGGTA----ADRIMLHCKE--------------------
>UniRef50_C8NNL7(147-291:329) Pseudouridine synthase n=8 Tax=Corynebacterium RepID=C8NNL7_COREF   E=1e-17 s/c=0.63 id=19% cov=66%
------------------EDLEYFVLNKPRGMHSTMSDdlGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGELANRLMHP--KYEVRKTYLA-----------TVRGEAGPNLVTTLRKGIELEDGPAKADYVQIIDTFQGK-SLIRLEIHEGRKHIVRRMLDEAGFPV--------------------------------------------
>UniRef50_B8BXW5(127-401:438) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BXW5_THAPS  E=2e-17 s/c=0.33 id=27% cov=85%
-------PPE-----IIYSNNHLLVVNKPAGWKSQPGDGGGTGsmsnavdpKCLLTHLQNQSlgggsqkNFISPTHRLDQPCTGALIFAKNGKAASRVQVAWAKRNVKKCYWVVVEggigngggrtnglellqsrsmqlkqsglyqmsavlktgggkgrgtsgntgsNKPAGGGSVTVSPVPPNLTS--KDIGDVKHGRICHIEWKHLlalpssRNSPSNRHLLSVTTDTGAKHQIRAMLAlAGGAPISGDLRYGNNVSNinqsggRVSQPLpdgsvALHARSV-------------------
>UniRef50_A4BBP0(66-269:270) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=Reinekea blandensis MED297 RepID=A4BBP0_9GAMM  E=2e-17 s/c=0.45 id=22% cov=85%
-------------IEIFY-DEELLslkplkaellhdagqysVWNKPNGMPLSGTDWGDFNsfERAVELATHGERECYWLTPFDYQAAGVQVLAHSRKAASQLTEQF------------DPEGLKGATLKYRCDVEGDFNDEGECTTDLEDGAVSTRFSKVRFDARPNRSVLEAELITGRDDQIRRQLSALRYPVVGDEDYGQNAEEQGLLR--LKCVEVRFTCPMTHETLVF------
>UniRef50_Q4DB45(5-333:378) Putative uncharacterized protein n=4 Tax=Trypanosoma RepID=Q4DB45_TRYCR  E=2e-17 s/c=0.28 id=31% cov=92%
----------DASFSVIYGNEELVVVNKPHDVPmdgeacpvtvekwawaylakggcadnSAGGGVEKEEDTtrTAGRGRGEKKMVKFVHQLDYATSGVLCVAFSREMAARLAHCFEMRTTRKAYLAvllgmmpttsamqkkldtdtgvdflrgspyashVRRISMDDVPGVCfirkcvieasgheegenadccatllevNLPVGYDTTDHegFRMTVNGRDARGSVTYLSVLQRGhmthptsgcSVPVTKVALFPRTGRRHQLRVHCHAIGFPILGDVTYARIPTPRVAskvtgaeevatvgaaesinapneidaieawQRMMLHAWRLSF--PVSMEPLR-------
>UniRef50_Q5CTM4(119-345:481) Yd1036cp-like RluD, S4+type 1 pseudouridine synthase n=2 Tax=Cryptosporidium RepID=Q5CTM4_CRYPV  E=2e-16 s/c=0.39 id=25% cov=76%
--------------KILYDSSTLLAVFKPCGIPCHPqGRFNKLSLTkliqseYLSKLNTNSTYIHPINRLDRVTSGLVLLSKDSSTTKNLSSkvQFA----HKYYLAminestsnfishisqssiegvsIRELSLDESHGITSHVIKceiglktlkdREGESLITRIDSSENSKYSLTYFFPLiscldineakkqkINETDKYSILLCKPITGRTHQIRAHLKYIGFPIVRDILYSDK-----------------------------------
>UniRef50_C8PKX0(65-453:470) Pseudouridine synthase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKX0_9PROT  E=2e-16 s/c=0.23 id=33% cov=94%
---------EPRGLKPIFECDAFAAFDKPSGILSHPSGRNSPYNMYDEIWSLYGQDACVAHRLDLETSGILIVAKDKDAARELKECFEQRRVMKSYLALVQGDLREglrgdlqsaacngeiescyalgfdeicgskfagdavslpssvsdlrdtlalkgtgnkfgfnilsngaSRGLWCDALSYDAqvkfnsgaptgdvdsrsefddlscgvsdklkpaitmssadnghkpcalsaakslpatskgcvnlkkfepakyakfseklkflkdfegfvidapiapsgefADLKIRMKISRDSKEAITLIRPLRYFSDiDASLIECYPLTGRQHQIRLHLFAAGAPILGEPLYGLSREQAerildkkmdetervrttGAPRLLLHANAICFE--LGGERYEIKS----
>UniRef50_P35159(58-202:244) Ribosomal large subunit pseudouridine synthase B n=200 Tax=Bacteria RepID=RLUB_BACSU  E=1e-15 s/c=0.59 id=24% cov=62%
-------------------------LYKPRGVIS-AAQDDKGRKVVTDFFKNIPQRIYPIGRLDYDTSGLLLLTNDGEFANKLMHP--KYEIDKTYVAKVKGIPP-----------KELLRKLERGIRLEEGKTAPAKAKLLSLDKKKqTSIIQLTIHEGRNRQVRRMFEAIGH----------------------------------------------
>UniRef50_B1C6T1(67-205:238) Pseudouridine synthase n=2 Tax=Clostridiales RepID=B1C6T1_9FIRM   E=2e-15 s/c=0.61 id=25% cov=61%
-------------------------LNKPQGVIS-ASKSKYGEETVVDLLGKKEHRLFPVGRLDKDTTGLIILTNDGDFAYKLTHPKYEK--EKTYEALVKGKVDS-----------KSLDKLKQGVVIDGKKTSRAKVRLVKMIGVN-SLVEITLIEGRKRQVKKMCEKVGH----------------------------------------------
>UniRef50_A9GX03(64-201:399) Pseudouridine synthase n=2 Tax=Bacteria RepID=A9GX03_SORC5   E=4e-15 s/c=0.61 id=22% cov=59%
-----------------------VALHKPRNVVSTL-RDPEGRPTVADHVRGTGARLYPVGRLDFATSGILLMTNDGDFANALLHP--RGGVPKTYV-------LKVQGV----MSDDDLTPWREGIRLEDGVTLPAEARLLRHEGDKT-WLEVTLREGRNQQIRR-----------------------------------------------------
>UniRef50_C1E520(58-333:372) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E520_9CHLO   E=8e-15 s/c=0.30 id=28% cov=86%
---------------VLYVDprARFFVVNKPAGMYVenvldfierymeevrraperhserskrakTCSDGATSIREAFDSLAKVGERFQLLHRLDRDTTGCLGIACDKETNRILSRAFQEGRVKKHYVAHCIntkfaddfqkkwkdwevdepfedgsramtwpQRFCNFRLECHTGHGRSKHGLWRLYAKEDVGrelpggskvKEARTNlYRGFDSDSDSKRLahlrelqsfpVVAEPITGRTHQIRMHCSQY-FPIVGDYKYGYDDtadddvvQEEREKGYRLHSFSLELP----------------
>UniRef50_D2VJR9(54-262:301) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VJR9_NAEGR   E=8e-15 s/c=0.40 id=32% cov=68%
------------------------------------------------------------HRLDMATSGVLCLSMTRESCACLSTSFEDKTSRKFYLALLSGDVnleelkmneklrnnvkvvnenDCSKIIITSFIGRDDGGNNENEEYDPTGrgfvmkqtlekpiedlskyktkqerqqhqfREGTSEMIILSYgqvENKPVTKVLLRPLSGRKHQLRLHSLLLGHAIIGDEMYG---ENDGFSRLMLHAYSLQI--PIDKEYLS-------
>UniRef50_A4RUK5(129-341:371) Predicted protein n=2 Tax=Ostreococcus RepID=A4RUK5_OSTLU   E=2e-14 s/c=0.38 id=24% cov=81%
--------------------------HKPAGVSVVPTVDNVKESCLAMLERAAGLKEGtlkPIHRLDVGTEGVLVLGTTSAFAKEFGDMLADRSVTKVYRVLTENAVPRGVHIHDAePATEGPRKMIMTKVDTDDIDgeiersaergggerggvsgPKRCILRVLKSENIAPARWEtkVELLTGRTHQIRAQFAALSAPLVGETLYrapgddGEVRVQKPSEYLGLQASEMHI-----------------
>UniRef50_Q6P087(82-270:343) RNA pseudouridylate synthase domain-containing protein 3 n=35 Tax=Theria RepID=RUSD3_HUMAN  E=4e-14 s/c=0.42 id=27% cov=79%
----------------------LVTLNKPQGLPVTGKPGELTLFSVLPELSQSLglreQELQVVRASGKESSGLVLLSSCPQTASRLQKYFtHARRAQRptaTYCAVTDGIPAASEGKIQAALKLEhidgvnltvPVKAPSRKDILEGVKKTLSHFRVVAT-GSGCALVQLQPLTVFSSQLQVHMVLQLCPVLGDHMYSARVGTVLGQRFLL------------------------
>UniRef50_D0NJP5(61-423:458) RNA pseudouridylate synthase-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NJP5_PHYIN  E=6e-14 s/c=0.22 id=34% cov=94%
---------DQLHLRVLSRDEHFVVLNKGPDVRM----DGAFDVTLEKALARDFPQvekFRWIHQLDFATSGVLVVGVNKDATATGCRLFREKQVQKEYLAVvrghlpfnpaesvdtaalpakactfsklglliqdmeemerlrnqqrgsraHQKTPGYPRGVRHGPnlftmeqaqllpeareltpaelaftkmtwhdltkeekgaytekakadkrrflkefseflnqekirLARKRKYESFDGEDSEEanepvayvfdapviephrstgvfrmlvgtetdtaAKQSTTMCFVLGhaiYKGEPVTKVLLRPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDE--APRMMLHAWRIWLRgRPADQKKygdLYFESPDPF
>UniRef50_A4S9F7(105-253:287) Predicted protein n=3 Tax=cellular organisms RepID=A4S9F7_OSTLU   E=8e-14 s/c=0.53 id=25% cov=66%
------------------EDVDglLIVMHKARGVVC--SHDVREGTSVYDalpeRWRRRKPSIESVGRLDKDTSGLLLLTDDGALVHALTTP--KKEIGKWYRVKT-----------DRPIPRDAVEVFASGELTLDGETRACKPAVCELM-DDETEARLRLTEGKFHQVKRMFAFFGCTVIG------------------------------------------
>UniRef50_A0JV58(225-369:406) Pseudouridine synthase n=37 Tax=Actinobacteridae RepID=A0JV58_ARTS2   E=1e-13 s/c=0.55 id=23% cov=66%
-------------------DENmvYMVFNKPKGVVSTMEDPDGRPCISDFVRNTHGERLFHVGRLDVATEGLLLLTNDGELANRLTHP--SYEVPKTYLVQVRGPFPQGIG-----------AQLKAGVELEDGMASVDSFKLVDSTPGHV-LIEVVLHSGKNRIVRRLFDAVGFPVL-------------------------------------------
>UniRef50_C0W3E8(133-287:325) Pseudouridine synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3E8_9ACTO  E=1e-13 s/c=0.51 id=23% cov=65%
-------------------DPDVItvLLHKPAGVVTTM-EDPQGRPTVADLAEQFISEHRtelehpesvrlvHVGRLDTETEGLLLLSNDGDLAHRLMHP--SFEISKTYVAIVEGQVEGWV-----------PRKLRRGIELDDG-LAQADRVVVKDAGPSGSIVEITLHSGKNRIVRRMLDAVGHPV--------------------------------------------
>UniRef50_C9KIR7(67-208:250) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIR7_9FIRM  E=1e-13 s/c=0.56 id=23% cov=63%
-----------------------LLLNKPKGYLST-AKDDRGRRTVLDLLPEVRERVYPVGRLDNNTEGLLLITNDGALMNGLLHP--RFEVEKTYHA-----------GVTGKLTEEKLQMLRDGLLLEDGMTAPAKVSLLPEREPgervrGLTRAAITIHEGRNRQVRRMFAAVGC----------------------------------------------
>UniRef50_Q5A0Y2(1-221:247) Pseudouridylate synthase PUS5 n=4 Tax=Candida RepID=PUS5_CANAL   E=2e-13 s/c=0.35 id=28% cov=73%
---------------------NYAVVNKPSGMVCDASHTNNIITALTNEFTKILPsvnssQFRLVQRLDRFVTGGLVVARNKKWADKVRKSfFQEGTLRltRRYVGLIalDQIPESTQGTIDFPIqALEKDYRGKNKSRELFTYSAVTHYKLIPSARrtikgvfpvfqqGPILPIILELETGRKNQIRDHiIQKFGVPLLNDD----------------------------------------
>UniRef50_B3E7C4(64-203:274) Pseudouridine synthase n=6 Tax=Desulfuromonadales RepID=B3E7C4_GEOLS  E=2e-13 s/c=0.56 id=20% cov=63%
---------------------YYVLLHKPAGYVTSL-KDPQGRQLVTELVKDVGERLFPVGRLDYNSEGLLLLTNDGAWANRLMHP--RHQVDKEYHVRVRGKIDPQQ-----------IKKLADGVELEDGPTGATTVRLLKNDQSND-WLSVTIREGRNRQVRRMCAAVG-----------------------------------------------
>UniRef50_A3BN26-2(130-317:400) Isoform 2 of RNA pseudourine synthase 6, chloroplastic n=2 Tax=Poaceae RepID=A3BN26-2  E=9e-13 s/c=0.40 id=24% cov=74%
--------------------DNYVVLDKPAA-TSVGGATDNIEESCVVFTSRALGLETPLmttHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTTAPVSTGIITHymrpinRAPRLVSEDHIKGWHVCQMEildckkvPWPSSLIRKVHKVDNcgwpqqEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAY--------------------------------------
>UniRef50_B2T6J8(2-152:189) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B2T6J8_BURPP   E=1e-12 s/c=0.50 id=20% cov=68%
---------------------HLLALNKPFGTICQFSP-HETRASLADWVK--VPDVYPAGRLDSDSEGLLLLTDDGALQARIAEP--RHKLVKRYWAQVEGAVDAatlKKLARGVDLGDYVTRPCRAEYVEPTDALWTRTPPIRFRAAIPTTWIELSITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q1IJT7(65-225:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=4e-12 s/c=0.46 id=20% cov=68%
-----------------------VLLHKPKGYVTTVSD-PEGRETVMDLVKGIPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHA--STHVPKKYLVKVSGEPTEeqiqelRNGVQLPPEQGHIHADPREGGRFGGEKRRSTAVKTapckieLTREGDNP-WYEVTLNEGRNRQIRRMFDFIGHHV--------------------------------------------
>UniRef50_UPI000196BAD7(59-202:247) hypothetical protein CATMIT_00510 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD7  E=4e-12 s/c=0.51 id=17% cov=66%
------------------EDKVYYLFYKPEKCVCTMSD-EHDRTCVADYFADSNERVYPVGRLDYDTTGALFMTNDGEFANLIMHP--SSHLEKVYEV-----------SVKGLLTKAEKNQLEKGIYLEGVKTLPCEIAITGNDEEhGTTMLLIRLVEGKNRQIKKMFEEVGHPV--------------------------------------------
>UniRef50_Q6CQC4(33-228:299) Pseudouridylate synthase PUS5 n=1 Tax=Kluyveromyces lactis RepID=PUS5_KLULA  E=7e-12 s/c=0.37 id=26% cov=78%
----------EFPLKVqeLWRDKHHVIFNKPPLALSQlPDKRtwynthDYDPPVLLDIVQSssgsilkdgtYEPSYYPIHRIDTPVSGGIVYAVNKQSAQQFSRNLRYGgnkgfSLTRKYVA-KVGKSKTANECKEGLIKWNGAITYFQRVDNEH--------------------LILQLVTGKKHQIRKLTQQvLDSPIYNDLKYGGKKVFDSDFQIALHSAYIR------------------
>UniRef50_C1DTU8(64-204:247) Pseudouridine synthase n=5 Tax=Bacteria RepID=C1DTU8_SULAA   E=1e-11 s/c=0.51 id=20% cov=63%
-----------------------LAIYKPVGYLSAVGKDRFGRKTLTDFLneLKIPYKLFPVGRLDYNSEGLLILTNDGEFANKVAHP--RNEIKKVYKVKVAGEVSQ-----------ETLKKMEEGTILEDGFFKPDKIKMLKREEDGT-WLLVEIHSGKKRIIRRFMDSFGH----------------------------------------------
>UniRef50_C7PP04(341-476:516) Pseudouridine synthase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP04_CHIPD  E=2e-11 s/c=0.53 id=28% cov=33%
-----------------------ILLNKPKGYITT-TDDPEGRKTVMELIQDattEEQRVYPVGRLDRNTSGLLLLTNDGELAQKLAHP--KHNIKKIYH--------------------------------------------------------------------------------------------------------------------------
>UniRef50_A2RP35(139-324:328) Pseudouridine synthase n=172 Tax=Firmicutes RepID=A2RP35_LACLM   E=2e-11 s/c=0.38 id=20% cov=83%
--------------QILdYQEYYYYLLNKPQGVVS--ATKDNVFKTVVQLLSEKDFRkdIFPVGRLDKNTEGLLILTNDGALGHDLTQP--KKHVEKEYFARIDGKVTDEIINKFA-----EGLTLKNGEKARPGELFVEKTYKGDSQSGWVSEIRVIIHEGKFHQVKRMFEAVEMYVL----YLKRirmGNLALDSDLALGAYR-----PLTIEEIE-------
>UniRef50_C5WHE9(64-201:245) Pseudouridine synthase n=3 Tax=Lactobacillales RepID=C5WHE9_STRDG   E=2e-11 s/c=0.52 id=22% cov=61%
------------------------ILNKPAGFLS--ATKDRAQATVIDLLDEtaRQKDVFPVGRLDKDTRGLLLLTNNGQLAHDLLSP--KKHVTKEYLAKVAGIMTDA-----------DKDDFAKGISLKDHQCLPAKLEVLDKDlSQETCVVSITIQEGKFHQVKRMVAACG-----------------------------------------------
>UniRef50_D0IWI1(43-192:223) Pseudouridine synthase n=2 Tax=Comamonas testosteroni RepID=D0IWI1_COMTE  E=3e-11 s/c=0.47 id=18% cov=55%
----------------------------------------------------DVPGVYVAGRLDADSEGLLLLTNDGQLQARIADP--RHKMEKTYWVQVEGIPDEaalQRLREGVELSDGKTLPAKARLIEPQPLMWPRNPPIRVRQNIPDCWIELIIREGRNRQVRRMTAAVGHP---------------------------------------------
>UniRef50_C4FUC8(61-199:243) Pseudouridine synthase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUC8_9FIRM  E=3e-11 s/c=0.51 id=27% cov=36%
---------------------HYYLLNKPEGILS--ATEDRHHQTVIDWLGEGYQHldLFPVGRLDIDTTGLLLLTNNGQLAHQLLSP--KKKVDKTYTATIRG---------------------------------------------------------------------------------------------------------------------
>UniRef50_Q01SF5(66-199:249) Pseudouridine synthase n=3 Tax=Bacteria RepID=Q01SF5_SOLUE   E=5e-11 s/c=0.52 id=20% cov=61%
-----------------------IALNKPKGTVTTV-HDPEGRETVMDLLHRVKERVYPVGRLDYHSEGLLLLTNDGELANSIMSA--ATHLEKTYVVKVTGT-----------LTAEQEEKFRTGVPLSGRRTLPAGLKLLSRAENP--WYEVKLTEGRNNQIRMMFRHFG-----------------------------------------------
>UniRef50_D0NFN0(180-327:335) RNA pseudouridylate synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NFN0_PHYIN  E=7e-11 s/c=0.47 id=33% cov=40%
------------------ETDELMVVDKPSGIPVHPTGSFQLNSLTHMLIRDRREalieetealKLFPVHRLDRLTSGLLILAKSADKARSLTAELTatsseggigSRSVQKYYVARVKGKFP------------------------------------------------------------------------------------------------------------------
>UniRef50_B3QY10(97-238:297) Pseudouridine synthase n=10 Tax=Chlorobiaceae RepID=B3QY10_CHLT3   E=8e-11 s/c=0.49 id=22% cov=60%
----------------LHENTQkiYILLNKPKDVVTTSSDEKSRKTVV--ELVGLKDRVFPVGRLDRDTTGVLLLTNDGDLTYRLTHP--TFGVQKQYVATLDKKIT----------SVDLQNIKKGFRLKDTGeKVSPCNARIL----DDGYTIWVAIHEGKNHQI-------------------------------------------------------
>UniRef50_A4J9G8(68-203:249) Pseudouridine synthase n=47 Tax=Bacteria RepID=A4J9G8_DESRM   E=1e-10 s/c=0.50 id=24% cov=22%
--------------------------------------------------------PFPVGRLDKDTEGLLLLTNNGKLAHQLLSP--KKHVPKTYYALVQGLVTE-----------------------------------------------------------------------------------------------------------------
>UniRef50_P0AA45(62-198:231) Ribosomal small subunit pseudouridine synthase A n=156 Tax=Gammaproteobacteria RepID=RSUA_ECO57  E=2e-10 s/c=0.50 id=21% cov=48%
-------------------------------------------------------KLHAAGRLDIDTTGLVLMTDDGQWSHRITSP--RHHCEKTYLV-----------TLESPVADDTAEQFAKGVQLHNEKD-LTKPAVLEVITP--TQVRLTISEGRYHQVKRMFAAVGNHVV-------------------------------------------
>UniRef50_A3JEU2(75-213:250) Pseudouridine synthase n=2 Tax=Marinobacter RepID=A3JEU2_9ALTE   E=2e-10 s/c=0.49 id=27% cov=23%
---------------------HYIMLHKPAGYLS--ATEDDTHPTVLQLLPPGLSQClHIAGRLDRATTGLMIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B0W634(12-289:493) Ribosomal pseudouridine synthase n=1 Tax=Culex quinquefasciatus RepID=B0W634_CULQU  E=2e-10 s/c=0.24 id=29% cov=67%
---------------------------------VHPCGRYRHNTVVFILAKEYnLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEHQIRNRQVQKEYICRVEGEFPESSPVsnsanhpaaapaqqqrehtssrssrgkrrrssprtallvvaarhqakhedeerertlggdpsphrpvkkggslnhhtrtaensltsnalprskrclvagggtaddellgmgsntldgiieCKEPIEVVSYKIGVCKV-SPKGKECTTTFQKLGYNG-SSSVVLCKPLTGRMHQIRVHLQYLGYPVVNDPLY--------------------------------------
>UniRef50_C0FY58(84-224:261) Pseudouridine synthase n=3 Tax=Clostridiales RepID=C0FY58_9FIRM   E=4e-10 s/c=0.48 id=22% cov=35%
---------------------------KPAGCVT--ATEDQLHKTVMDYLTDTvRSDLFPVGRLDIDTEGLLLITNDGALAHDLLSP--AKHVEKTYYAVIDGVVTE-----------------------------------------------------------------------------------------------------------------
>UniRef50_Q7UUP0(77-222:395) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UUP0_RHOBA  E=4e-10 s/c=0.46 id=21% cov=66%
----NYLRPQKL----VY-----YVVNKPVGIVTT-NRDPRGRPRVIDLVPP-TERVFPVGRLDISSEGLILLTNDGDLAQKLAHP--KFGIQKVYRVVVAG---EVRGETMKKM-REGIYIAEGLVQVDGAKIIKARTK--------ATEMEIRLKEGKNREIRRILARFGH----------------------------------------------
>UniRef50_C1XV14(61-193:369) Pseudouridine synthase n=2 Tax=Meiothermus RepID=C1XV14_9DEIN   E=5e-10 s/c=0.50 id=20% cov=23%
----------------------VIALHKPVGVTTTKSDPHAERT--VYQLVPDVPGLHPVGRLDKDSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q3AVD5(65-204:247) Pseudouridine synthase n=3 Tax=Cyanobacteria RepID=Q3AVD5_SYNS9   E=6e-10 s/c=0.47 id=20% cov=63%
-------------------------LNKPVGVIC-SCRDPQGRATVLDCLPHQeRSGLHPVGRLDADSRGALLLTDQGELTLRLTHPRYNHA--KTYRVLVRGIPSSQ-----------ALRRWRDGLLLDGRLTRPARVHCL-RSRGASSLLEVELKEGRNRQIRRVAELLGHPVI-------------------------------------------
>UniRef50_Q15Q67(73-211:241) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q15Q67_PSEA6   E=6e-10 s/c=0.48 id=28% cov=63%
----------------------LVMLNKPLGYVCSHDNNEGMRiyDLLPERWEFRNPKIVSVGRLDKDTSGLILVTDDTKLVHQLTSP--KHHVDKVYQV-----------SVDCPLQSDIIDSFAKGVVLGEGAE-QCLPAKIEIVSENVANV--TLNEGKYHQVRRMFAACGYHV--------------------------------------------
>UniRef50_C7M7R0(210-349:387) Pseudouridine synthase n=4 Tax=Bacteroidetes RepID=C7M7R0_CAPOD   E=7e-10 s/c=0.47 id=19% cov=37%
------------------EKKEYILLNKPKGFITTTNDEKGRKTVMDLVANATNVRILPVGRLDRATTGLLLLTNDGELTKKLTHP--THGVRKIYHVI------------------------------------------------------------------------------------------------------------------------
>UniRef50_B1XJP9(65-207:259) Pseudouridine synthase n=3 Tax=Chroococcales RepID=B1XJP9_SYNP2   E=7e-10 s/c=0.47 id=18% cov=63%
-------------------------IHKPKGVVSTCAD-PKGRSTVLDLLpppLRQGKGIHPIGRLDAQSTGALLLTNDGNFTLALTHP--RYHIPKTYRVWLKGKVPEHV-----------LDQWRQGVMLGDRRTLPTQIH-LKTITQDKTCIDIMLTEGRNRQIRRVAEQLGFPVV-------------------------------------------
>UniRef50_Q2NZN4(99-243:286) Pseudouridine synthase n=13 Tax=Xanthomonadaceae RepID=Q2NZN4_XANOM   E=2e-09 s/c=0.45 id=21% cov=63%
-----------------------LMLNKPRGVVTTV-RDEQGRDTVYRCFdGAGLPWIAPVGRLDKASEGLLLFSNDPQWAATVTDP--ATGPDKTYHVQIDCLPNVAQLAQLQAGVVDPDPEG-------EGMLLRAKQVSVLREGERNAWLEIVLDEGRNRQIRRLLAA-------------------------------------------------
>UniRef50_D1B9Q8(56-196:234) Pseudouridine synthase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Q8_THEAS  E=2e-09 s/c=0.46 id=24% cov=25%
------------PLDKIY-----IVMNKPRGVVC--AVEDRRYRTVLDLLPPQIRalRPFPVGRLDKESQGLLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q6F9V5(61-200:239) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V5_ACIAD   E=2e-09 s/c=0.46 id=23% cov=63%
----------------VYREKVYIILNKPKGFEC--SHQPHHHQSVFSLLPDLLIQRNIaaVGRLDQDTTGLLLLTDDGQYLHTLTHP--KKHVPKVYHVATI-----------DPITVDQMHQLEQGVELhnEKGVFAATNVTLL-----NETQLSMTIHQGVYHQVKRMIAAVG-----------------------------------------------
>UniRef50_C1A8K5(63-195:237) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8K5_GEMAT  E=2e-09 s/c=0.48 id=24% cov=61%
-----------------------IVLHKPA--AVMTTRKDPEGRATVFDLVDDAPGLVYVGRLDFMTEGVLLLTTDGTAAHVLTHP--SHEVERTYVATVRGD------------AVTAAREARRGVKLDDGLVVPSEVTAYP-LGERRWAFELTITEGRTHEVRRICDALG-----------------------------------------------
>UniRef50_B8BYZ7(69-209:571) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BYZ7_THAPS  E=9e-09 s/c=0.44 id=37% cov=39%
---------------VVYQDDNYLVINKPPDLrmdgpylaSVHklllylfpppslrgPSQeggggdvegdstdinttsnlqlDHRHHTQLLQAIAPLSKHsslrddpFRIVHQLDYATSGVLLYAKNRKAAGKACISFQERKTDKQYVAIV-----------------------------------------------------------------------------------------------------------------------
>UniRef50_A6FY13(54-212:238) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY13_9DELT  E=3e-09 s/c=0.40 id=19% cov=26%
---------------VLREHAHLM-LHKPHGVVTARADGRHPTAYALLEGAPLFAELRAVGRLDLDAVGLLL---------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A5Z4I7(1-131:175) Pseudouridine synthase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4I7_9FIRM  E=4e-09 s/c=0.49 id=19% cov=59%
-------------------------LNKPAGVLS--AVSDNNCKTVIDLLdVTPKKGLFPVGRLDKDTEGLLLITNDGELSHNLLSP--AKHVDKTYYV-----------ELNGDLIDSDIELFEKGLDI--GEKNLTKPAILKILEKRSTAL-ITITEGKYHQVKRMFQAIG-----------------------------------------------
>UniRef50_B8ET33(75-214:255) Pseudouridine synthase n=29 Tax=Proteobacteria RepID=B8ET33_METSB   E=5e-09 s/c=0.45 id=24% cov=64%
----------------------VIALNKPRGVTCSRKEAGPLVfDLLPPRFRLREPALSTVGRLDKDTSGLLLITDDGALLHRLISP--KHNIAKRYCAKLAR-----------PLRGDEAEIFASGEMMLDDEAKPLLPAVLRVLSPTEAEVSVT--EGRYHQIRRMFAATGNHVL-------------------------------------------
>UniRef50_Q4A5Z2(43-199:234) Pseudouridine synthase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5Z2_MYCS5  E=9e-09 s/c=0.40 id=16% cov=67%
----------DPKLDKIYlegillearEEFSYIMMNKPAGYICANFDWNKQVVfELLLDLEMNLKDFFTIGRLDIDTEGLLIITNDGKLSHNLLSP--KKHIPKTYYV-----------ELDKPLEKNIKELLEKELLIDEIKYKKSILNNISNNK-----WEITIFEGKFHQIKIIFAHFGY----------------------------------------------
>UniRef50_C1ZE67(94-235:554) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZE67_PLALI  E=1e-08 s/c=0.44 id=18% cov=64%
------------------EEKRYFLFHKPAGVLCTNSD-PAGRTRVIDCFPPNVGRLFTVGRLDDGTEGLLIVTNDGDLAERLTHP--KFGIPRIYRAVVAGNPS-----------TEAINQLLEGLYFAEGRFRMSSVNRVKSQG-SATVLEITMREGQNREIRRLLARVGH----------------------------------------------
>UniRef50_C3YVI6(172-399:418) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YVI6_BRAFL  E=1e-08 s/c=0.27 id=23% cov=87%
---------------IVYDDGHIVAINKLAGLPVQGqTPEQLSINSLLPELGAALEasDLSIVKPLDWHLSGIVLLARTPEARAEVFNVTKaARQRDKFYR--------KYWGVVIGNL--DPSEDCTSVKPNPSCSEKEGGSELSDEIQGPQSGAGICPV--FVDQLQVHLTTKLCSILGDHVYSSRVGsvagmpalmeptnvgprtqrvpKDILKKMnlraiqmhkvpvHLHCGEMLLPG-YRGRDVRITAPLP-
>UniRef50_Q2W4E4(74-212:247) Pseudouridine synthase n=20 Tax=cellular organisms RepID=Q2W4E4_MAGSA  E=2e-08 s/c=0.44 id=21% cov=62%
----------------------VLMLHKPEGYTCSTSDPGRIVYELLpERFMHRNPIVAPVGRLDRDSTGLLLLTDDGPLAHRITSP--KRHVPKTYEVTLARPLSGEEGAVFA--------SGTLMLRSESTPLAPAELVV---SGPQTA--RITITEGRYHQVKRMFAAVG-----------------------------------------------
>UniRef50_B8LCC0(40-253:332) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LCC0_THAPS  E=4e-08 s/c=0.28 id=30% cov=68%
-------------------------------------------------------KPYLVHRLDHRTSGAVIVGFDSKSAGVLHGRLRGGEARKLYVALVRGDLRERFrqaaadGCCDGGLSAILPERndveeaskmknvekaqtyvaseyttkitvdlpinvkvdgvdvekdattdfyfiASMCLDEDDSGRANDDTAKVPFTNKAVSLILCHPITGRTHQIRRHARkAFSSPVVGDREHGDSRVNRFwrekvgLDRLTLHCWYLDLP----------------
>UniRef50_C1TRI8(35-168:212) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRI8_9BACT  E=9e-08 s/c=0.44 id=27% cov=22%
-----------------------IVMNKPKGYVC--AVEDRFYPTVVGLLSPDLraKRIYPVGRLDRQSEGLLVL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6WK95(76-224:256) Pseudouridine synthase n=12 Tax=Gammaproteobacteria RepID=A6WK95_SHEB8  E=1e-07 s/c=0.39 id=20% cov=65%
-------------------DEHILqanapvyvMLHKPIGVVS-ATKDIQHKTVIDLLDCEARDELHIAGRLDLNSSGLLLLTNDSRWSDALMSP--THKVDKVYRV-----------TLANPITEEYIAAFAEGMYF-GFEDITTQPAKLVILADNVA--EVTLHEGKYHQIKRMFGRFRNPVVG------------------------------------------
>UniRef50_O96270(119-301:338) Pseudouridine synthase, putative n=2 Tax=Plasmodium RepID=O96270_PLAF7  E=1e-07 s/c=0.32 id=24% cov=68%
-----------------------IVLHKPKGLLCT-SNDEKNRKSIYTLFPEEMLQKYrlvTVGRLDRNTSGVLLLTNDYAWVNKLTHPKYQRI--RTYR-VHIEGPVKMNALKELargiYLEEDEKTQPKKIYNYKESREKsniddkkkkkmskmkkktnpafieilREEKIKIKEDTKKITVLNISIKEGRNRQIRKMFQQINQPVI-------------------------------------------
>UniRef50_C8WBY9(332-466:509) Pseudouridine synthase n=3 Tax=Zymomonas mobilis RepID=C8WBY9_ZYMMN   E=1e-07 s/c=0.44 id=25% cov=60%
--------------------------HKATGLLTT-ERDPEGRKTIYDRLPADLPRVMPVGRLDMNTEGLLLLTTDGGFKRMLELP--ATHIERCYRARVF-----------GDVSQDQLEELIEGVTI-DGIHYGSIDANLERRTGRNGWVEMKLHEGRNREVRRVLGYLG-----------------------------------------------
>UniRef50_Q31GA0(82-220:317) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q31GA0_THICR  E=4e-07 s/c=0.41 id=30% cov=21%
-----------------------------------------------------------VGRLDINTSGLLILTNNGELANRLMHP--SYEMEREYSVRVFGEVSDE----------------------------------------------------------------------------------------------------------------
>UniRef50_B8CBS5(72-209:253) Pseudouridylate synthase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBS5_THAPS  E=5e-07 s/c=0.41 id=22% cov=47%
----------------------------------------------------------PVGRLDKETSGIILMTSDGRLPNAALRGKYKH--PKTYVVKA-----------NRPVANDDIKRLREGVPLTAPTlPCKVKAVQLSTLDLSSRYLEITLVEGRNRQIRKMLEAIGY----------------------------------------------
>UniRef50_A8SIK9(49-196:235) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIK9_9FIRM  E=8e-07 s/c=0.38 id=28% cov=26%
--------------EILFDDEiviykefTYLMLNKPKDFIS--ATFDTKLPTVLDLLEFPYSNMElfPVGRLDIDTTGFLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q0AS26(74-204:372) Pseudouridine synthase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AS26_MARMM  E=9e-07 s/c=0.43 id=28% cov=26%
--------------------------HKPDGLVTTHAD-PEGRETVFDAIPKDIGRVISIGRLDLTSEGLLLLTNDGALARAL----------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3CLN2(61-197:241) Pseudouridine synthase n=59 Tax=Lactobacillales RepID=A3CLN2_STRSV   E=1e-06 s/c=0.41 id=28% cov=21%
-------------------------LNKPSGAVT--ANRDAEKLTVLDLLDKEIEKEnlYSIGRLDRDTEGLLLI--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_O66829(61-196:238) Uncharacterized RNA pseudouridine synthase aq_554 n=1 Tax=Aquifex aeolicus RepID=Y554_AQUAE  E=1e-06 s/c=0.41 id=22% cov=33%
-----------------------LMLYKPKGYLST-TEEDKKYPSFLELIREHFPsrKLFSAGRLDVDAEGLLLITDDGELAHRLTHP--KWKVEKEYI--------------------------------------------------------------------------------------------------------------------------
>UniRef50_B2UMD6(74-204:467) Pseudouridine synthase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UMD6_AKKM8  E=2e-06 s/c=0.42 id=18% cov=33%
----------------------VVLLNKPRGYVCSREAQGAIG-TVYDLLPPRLRHLNYVGRLDADSEGLLIMTNKGELTQVLSHP--TGGIEKEYW--------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q605S3(19-149:231) Pseudouridine synthase n=1 Tax=Methylococcus capsulatus RepID=Q605S3_METCA  E=2e-06 s/c=0.42 id=28% cov=21%
-----------------------------------------------------------VGRLDVNTQGLILLTNNGELAHRLMHP--SHAVEREYAVRILGTVSEA----------------------------------------------------------------------------------------------------------------
>UniRef50_B2HUK5(60-202:307) Pseudouridine synthase n=9 Tax=Gammaproteobacteria RepID=B2HUK5_ACIBC  E=2e-06 s/c=0.38 id=21% cov=40%
------------------EDEirrRVLIYYKPEGEICSRNDPEKRPTVFDHLPQIANDRWVMVGRLDINSTGLLLFTNDGELANRLMHP--SNEIEREYAVRVMGEVTP-----------------------------------------------------------------------------------------------------------------
>UniRef50_Q4QFE4(886-948:1067) Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4QFE4_LEIMA  E=2e-06 s/c=0.87 id=49% cov=24%
---------------------------------------------------------------------------------------------------------------------------------ETLRSAQTALQVMHYdAATDQTVVKCTLGTGRTHQLRVHLASLGHPIVHDSKY--------------------------------------
>UniRef50_A6GNL7(132-267:458) Pseudouridine synthase n=2 Tax=Betaproteobacteria RepID=A6GNL7_9BURK  E=3e-06 s/c=0.40 id=16% cov=33%
----------------------VLIYHKPAGEIVSMDDPQGRTTVFQKLPKISNGKWIAVGRLDFNTEGLLLFTSSGELANRLMHP--RYEVQREY---------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q688C2(59-193:235) Pseudouridine synthase n=1 Tax=Mycoplasma mobile RepID=Q688C2_MYCMO   E=5e-06 s/c=0.40 id=21% cov=26%
-------------------------LNKPKNVVTTL-KDNFNRSIITDFIDEKKYKIFPVGRLDYDTTGIIILTNDGETANKL----------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6B2K7(113-247:698) RNA-binding S4 domain protein n=20 Tax=Alphaproteobacteria RepID=C6B2K7_RHILS  E=1e-05 s/c=0.39 id=28% cov=21%
--------------------------HKPTGLVTTNAD-PEGRSTVFDNLPEELPRVMSIGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B6R892(98-231:681) Pseudouridine synthase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R892_9RHOB  E=3e-05 s/c=0.38 id=25% cov=23%
----------------------LWLFHKPRGTVTT-NKDPEGRKTVFDILPKDMPRVVTVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B3L0N6(21-205:392) Putative uncharacterized protein n=3 Tax=Plasmodium RepID=B3L0N6_PLAKH  E=7e-05 s/c=0.27 id=22% cov=40%
--------------SVLYQDDDYLVVNKAYGVSTFGRAPQKESiiKSLEELNLEGHESANVLYKLHNHVGGCLLICKNKF--------IKNHTYGNTFLALVYGQVENAQ---------------------------------------------------------------------------------------------------------------
>UniRef50_A0K8E6(483-641:669) Pseudouridine synthase, Rsu n=38 Tax=Burkholderia RepID=A0K8E6_BURCH  E=0.0001 s/c=0.31 id=19% cov=49%
-------------------------------------------------------------RLDIDSTGLLVLTQNGVIAKQLIG--EQSDIDKEYLVRVRFGERLIDIDQHFPAESLAKLRHGLELDGVALKPALVSWQ-------NGEQLRFVLREGKKRQIRRMCELVGLDVIG------------------------------------------
>UniRef50_B7G6C8(1-98:151) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G6C8_PHATR  E=0.0002 s/c=0.50 id=34% cov=23%
---------------------------------------------------------HPVGRLDYDTSGLLLFSSSGALTQRLLHP--KHEVEKEYVAVVTGIVVEDE---------------------------------------------------------------------------------------------------------------
>UniRef50_A3LZQ0(15-206:265) Pseudouridylate synthase (Fragment) n=1 Tax=Pichia stipitis RepID=A3LZQ0_PICST  E=0.0002 s/c=0.25 id=21% cov=71%
-----------------------VVVNKPSGI--QCSGFKNYAHHLLPQLTKKFKALHPdrtlnasqfklVHRLDKYVTGGLVVARDRKWAMKSSKSLSSKgnspdSIIRRYVGLLPIPEDDslKSGWITYDIqapQKDYKGSTETRKVlsykaltifqiLDELKLQPTKTQLSMypkiYSGKCIVPIILQLQTGRKNQLRDHtLQSFNTTLLNDD----------------------------------------
>UniRef50_B6WWG1(104-315:347) Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWG1_9DELT  E=0.0002 s/c=0.23 id=26% cov=64%
-------------------------------------------------------------RLDARTSGIVCaaVAEDEDSLAATVRDFRQaeagGRCCKGYLALLSGSLEREACVRRA---LDMAQRRVVRVLDSEAADAarWTWFRPLYHWqgeachafarelcrrfslsvpslPDSLTLAGCTIHRGARHQIRAHAAALGHALWLDGLYASSLPQSPEDGQgafFLHHGALHLP----------------
>UniRef50_Q9ZJG0(68-252:262) Uncharacterized RNA pseudouridine synthase jhp_1352 n=37 Tax=Epsilonproteobacteria RepID=YE59_HELPJ  E=0.0003 s/c=0.26 id=25% cov=35%
----------------------VLVYHKPKGELVSKADPLK-RHVIYESLEKKYAHFAPVGRLDFASEGVLLLSDSKAVVSALMHA----NLEKEYLVKIQG---------------------------------------------------------------------------------------------------------------------
>UniRef50_Q8I312(738-797:955) Pseudouridylate synthase, putative n=2 Tax=Plasmodium RepID=Q8I312_PLAF7  E=0.0004 s/c=0.79 id=36% cov=23%
------------------------------------------------------------------------------------------------------------------------------------KPSITKFMFLSYNSSiDESLILCQPITGRTHQIRAHLKSLSYPISNDAHY--------------------------------------
>UniRef50_B8FT16(100-317:334) Pseudouridine synthase n=70 Tax=Bacteria RepID=B8FT16_DESHD   E=9e-57 s/c=1.02 id=35% cov=95%
---------ENIPLEILYEDEDVLVVNKSQGMVVHPAPGAWTKTLVNALLYHCRNlsgingvlRPGIVHRIDKDTSGLLVVAKNDLAHQGLAEQIKAHSMARRYLAIVHGVVFEPSGTVEAPIGRDPADRKKMAVVFQNAKEAVTHYEVLERFRD-FTLLEARLETGRTHQIRVHMAYLKHPVLGDPLYGPRKNPFGLQGQMLHAQLLGFQHPRSGEYMEFSAPA--
>UniRef50_C7LVL1(1-217:234) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=C7LVL1_DESBD   E=3e-54 s/c=0.99 id=56% cov=99%
MSLEplRYDPPTEPRLAVIHEDRDMVVVNKPSGLLSVPGRTPELFDSVLSRVREIHRGAQAVHRLDLGTSGVLVVATRRKAETILRQQFQDRLTRKLYLARVQGVMSEDSGQVDLPLICDWPNRPMQMVCHDTGKPALTDYQVLESDGEST-LVLLRPHTGRSHQLRVHMASLGHPILGDNLYG---EQRPGERLLLHASQLGLYHPYSGEWTTFHAPCDF
>UniRef50_B9L028(68-299:322) Pseudouridine synthase n=2 Tax=Thermomicrobia (class) RepID=B9L028_THERP  E=3e-54 s/c=0.92 id=37% cov=99%
--LEVYLPPVEPptdlepeflPIPVIYEDDDIIVFDKPPGIVTHPAPGHEHGTLVNALkaIRPDLQvqpshRPGIVHRLDKDTSGLLVVAKTEAARLALLEQWQSRSVVKKYTALVHGVVEPDSGTIDAPISRDPVERTKMAVV-SWGRPAITHFRVLERFR-CATLLDVTIETGRTHQIRVHCAFIGHPVVGDSQYGGHRPFcVPVPRQFLHARYLRFVHPTTGQAIELETPLPY
>UniRef50_Q2CAH0(3-215:215) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=Q2CAH0_9RHOB   E=2e-53 s/c=0.99 id=55% cov=97%
----DYDPP-DVPLAVLHEDHEVVLVDKPAGLLSVPGKGEHLADCLLARVQAAFPTALLVHRLDRDTSGVMIFALTPHAQRHLGLQFEKRQTRKTYVARVAGRIADKTGTVDLPLIVDWPNRPKQMVDHENGKPAVTDWRVV-RASDAETRVRLFPKTGRSHQLRVHMLALGHPILGDPFYAEGPARAH-PRMMLHSETLQFRHPDGGRGMRITAPAPF
>UniRef50_Q01Q94(58-286:296) Pseudouridine synthase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Q94_SOLUE  E=1e-52 s/c=0.91 id=33% cov=98%
--VEPADPPplnataEDIPLRILYEDADVVAIDKPAGMVVHAGAGVHSGTLVNALLHRfatlsgvgGPLRPGIVHRLDRFTSGVLLVAKNDAAHQKLAAQFSGREIEKVYLALVHGTVKPETGRIERPIARDPVHRARMTARLAEGRAAWSEYRVLRRFPD-FTLLEVRIGTGRTHQIRVHLASIRHPVVGDTLYGAP-AQPLLGRYFLHAHRIRFHLP-SGREMLIESPLP-
>UniRef50_C1FEQ4(98-347:357) Predicted protein n=2 Tax=Micromonas RepID=C1FEQ4_9CHLO   E=1e-50 s/c=0.80 id=36% cov=97%
--------PENIPLDVVFEDDHLVVVNKPPGMVVHPSAGHAGGSLVNALLFHcnersnrgddaskmiDVPRLGVVHRIDKGTSGLLVMAKDAAAQAGLQTQFANRSVRRRYLAIVLGTPARESGRIDAPIGRDPADRLKMAIVRgATGRQAISNFGVRARLvRGNASLVEWQLETGRTHQIRVHAREMGHPIVGDEAYggggsaaaeflrrdgamsaaAAREIVAKCARPMLHARSLGFRHPVTGEEISFavEPPPDF
>UniRef50_C0ZH07(78-286:306) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZH07_BREBN  E=1e-50 s/c=0.96 id=31% cov=94%
----------DMPLSIRYEDEDLMVIAKPAGLVVHPTGNHPSGTLANGMIAYWKKRgenrkFRAVNRLDKDTSGLMIVAKNQWAHEQFSRMQQIRTLQRTYRAIVQGIVESDDGTINTPIGL-AENSFITRQVRPDGQTAVTHYRVLAR-GEGMSFVEVKLETGRTHQIRVHMSSEGHPLAGDDLYGG--EREHIGRQALHAWGLSFVHPRSGLAMSWEEPLP-
>UniRef50_A9IQ66(77-320:334) Pseudouridine synthase n=5 Tax=Bacteria RepID=A9IQ66_BART1   E=1e-50 s/c=0.82 id=36% cov=96%
---------EAIALDILYEDDHVIVINKPAGLVVHPGNGNWTGTLVNALIYHCGnslsgiggvKRPGVVHRLDKNTSGVMVVAKNDLAHKSLSAQFSDHGrtcaLDRRYHALIWGTPHRNVWTIDASLGRSPHNRTKQAVVHkqtPHARHAVTHFSLLEKYGTHadstsfASLLECRLETGRTHQIRVHMAHIGHPLIGDTVYGNafktksntlnptlKNAIDQFNRHALHAASLTFEHPSSGKVISFSAPLP-
>UniRef50_C7H7W3(75-295:314) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Faecalibacterium prausnitzii RepID=C7H7W3_9FIRM  E=2e-50 s/c=0.91 id=32% cov=96%
--------PQEIPLDIIYEDAHLLVVNKPKGMVVHPAPGNPDGTLVNALLWHCKGslsgiggeiRPGIVHRVDKDTSGLLVVAKDDATHIGLSQQMAVHSVERAYNTIVYGGFAQDEGFVESNLGRSKTDRKKMAVypaSEPHTKYAYTGYKVLERLGE-FTMLECRLKTGRTHQIRVHMASIHHPVAGDPVYGPHNCITSLHGQCLHAKTLGFIHPITGEHLRFDSELP-
>UniRef50_D0MJ49(86-340:355) Pseudouridine synthase n=2 Tax=Bacteria RepID=D0MJ49_RHOM4   E=2e-50 s/c=0.79 id=39% cov=94%
-------------LDIVYEDPYLIVVNKQAGLVVHPARGNRSGTLVNALLYYigsgpvrfdeeddlpeddeiglsmvstgpteaklEAPRPGIVHRLDKDTTGLIVVAKDDVTHTGLARQFEHRTIARTYLAIVWGVPDPPRGRIEAAIGRDPRDRQRMAVVPDDrGKRAVTHYEVVEALP-AAALVRFKLETGRTHQIRVHARHIGHPVLGDPTYGGRTIRYGphtprrrafydqlfarLTRQALHAHTLGFRHPRTGEWLEFEAPLP-
>UniRef50_P54604(78-290:302) Uncharacterized RNA pseudouridine synthase yhcT n=5 Tax=Bacillus RepID=YHCT_BACSU  E=3e-50 s/c=0.94 id=32% cov=94%
--------PEYGELDILFEDNHMLIINKPAGIATHPNEDGQTG-TLANLIAYHYQingetcKVRHVHRLDQDTSGAIVFAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRRV-SPGGQTAVTHFKVMaSNAKERLSLVELELETGRTHQIRVHLASLGHPLTGDSLYGGGS--KLLNRQALHANKVQAVHPITDELIVAEAP---
>UniRef50_D2R7T3(110-340:355) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7T3_9PLAN  E=5e-50 s/c=0.86 id=34% cov=96%
--------PEKIPLDILFEDEHLIAVNKPPGMVVHPARGHWSGTLTSALAFHfqqlstvgGQHRPGIVHRLDRDTSGVIIVAKTDPVHFSLAAQFADRTTAKEYFAITAGVPDRDRDVVSQPIGIHPFHREKMAIRpgHSTSRDAETMFHVLERFAQHAA-VECLPKTGRTHQIRVHLAHVRTPVLCDKLYGGRAEitqgelvrdgstEVVLNRQALHARKLSINHPKTGERLTIEAPLP-
>UniRef50_A7NB61(84-300:332) Pseudouridine synthase n=18 Tax=Francisella RepID=A7NB61_FRATF   E=8e-50 s/c=0.91 id=33% cov=95%
---------EDINLKIIFEDDDIIVIDKPVNMIVHPGAGNPTGTVSNALLHRYkdqdkLPRAGIVHRLDKDTSGLMVAAKSSIAYHNLVQQLAERKVSRKYLAIVEGEIYQ-QGTINQPIGRDPTNRTKMAINY-RGKEAITYYTPIEVY-DGFTLIECQLETGRTHQIRVHMKSIKHPLVGDQTYNKSSTKleklaiTIPTRQALHAYKLSFIHPTTAKMVKFKSKLP-
>UniRef50_C1F7V3(100-343:355) Pseudouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7V3_ACIC5  E=1e-49 s/c=0.81 id=32% cov=96%
---------EDIPLDIIYEDKDLIVVNKPAGMMVHAGSGatdsaRNRGTLVNALLGRQEKlsktggdlRPGIVHRLDKETSGLIIVARNDAAHQRLAEMFSQREIHKTYLALVHGHIAEDRGTINAAIARDViRRTRMTTRRTEGARTAISHYRVQRRIEtrwGKFTLVSVRIETGRTHQIRVHLSSIGHPVVGDTHYGAPttivlpvanrarrkqlpaPEGLSLPRNFLHAAELKFPHPRSEKPLHLEAPLP-
>UniRef50_Q489H0(357-567:567) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=Q489H0_COLP3  E=1e-49 s/c=0.94 id=49% cov=94%
------NPAEGIDLEIVFQDEHVVVVNKPAGLLSVPGKSIK--DSVYTRIKTQFPQASgglIVHRLDMATSGLLMLALNERAHKHLQQQFMNKEINKRYVATIEGKLEKTSGEICLPLRGDFDDRPKQMVCHEHGKYAETHWQLIEEV-DNTSKLFLYPITGRTHQLRMHCAHpdgLNLPIIGDSLYGHS-----ADRLHLHAQRLSFTHPITKELLTFEVAENF
>UniRef50_B0JGC2(300-501:501) Pseudouridine synthase n=2 Tax=Microcystis aeruginosa RepID=B0JGC2_MICAN  E=8e-49 s/c=0.97 id=41% cov=92%
-------------LEIIYEDEGIIAINKPAGLLSVAGRYQDSQDAVVNRFRRQGKNLIPVHRLDRETSGILLLAKSLDIYRCLSQQFQRREVEKIYEAILSEIIERESGIIDLPLWGNPQNRPYQTVDWQRGKASQTYFKVVGKEG-NYSRLEFIPYTGRTHQIRVHsQQGLGIGILGDRLYNGKQ----SDRLHLHAKQLSFRHPQTENKLDLIIPTPF
>UniRef50_P75485(75-286:309) Uncharacterized RNA pseudouridine synthase MG209 homolog n=2 Tax=Mycoplasma RepID=Y292_MYCPN  E=3e-48 s/c=0.91 id=33% cov=96%
--------PYDFPLDILYEDEQIMVVNKPNGLISHPTSFNESESLLGAALFHCNHQPvFLVHRLDRDTSGVIMLAKNQSSLLHLQKQLQQRVMKRYYLALVHFPLDSLSGTISAPLERVGNNKVMWKVgnSSNKAKNAFTKFTVLNQN-EKAALIKCELLTGRTHQIRVHLQFIKHPVYNDPLYGLKSEQATEYGQYLHAQQISFIHPTLNKEMGFEAQLD-
>UniRef50_A4J479(79-286:303) Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J479_DESRM  E=5e-48 s/c=0.93 id=31% cov=93%
--------PERMELNILYEDAHLLAVNKPPGMLVHPLTNETSGTLANGVLYHWLQqgtidRFRPVHRLDRNTSGIVLIARNPYVQQQLQIQMKQGQFVRRYLALVKGKVQPEQGVIQAPIALEEGSFIK-RMISPAGKEAISHYQVLRTF-NQASLVRVELETGRTHQVRVHMAHMGHPLLGDSLYGGDTSN--IKRQALHCAYLAFNHPVQGSRIKISC----
>UniRef50_Q6MGX8(64-302:319) Pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGX8_BDEBA  E=2e-47 s/c=0.79 id=36% cov=94%
--------PFDLKLDVLFEDEDLIVINKPAGLVVHPAAGHAHDTLVNALIHHtddlsmkfGEERPGIVHRLDKETSGIIVIAKNDKAHESLTSQFKERSTHRIYYAVCLGTARTLSGSVRSFLARHPVDRKRYASVLGDdrkpltdpnddpglGKWAVTHFEVLQRKS-GMSYLKLKLETGRTHQIRVHMSESGLPIAGDTLYGADrkiksiearatqEDLRTLPRFLLHAAELGFTHPRTKERMFFT-----
>UniRef50_B9XHZ1(367-591:599) Pseudouridine synthase, RluA family n=2 Tax=Verrucomicrobiales RepID=B9XHZ1_9BACT  E=2e-47 s/c=0.84 id=31% cov=99%
--MPNLTEPEvNGDIQILHEDEALIVLNKPAPLPMHaGGRFNRNTLEYILHQVYHPQKPRAAHRLDANTSGVVLVTRTRHFASHLQPQFAHGEVGKFYLVKVQGTPKEDSFSCNAPISAEPSEAGAREVDFEEGLPSRTEFRVLQRNADGTTLLEARPLTGRTNQIRVHLWQMGLPVCGDPVYlpGNKLGETQTLRvedapLCLHAWRVTFLHPLHRQRMEFTAPKP-
>UniRef50_UPI00016C3FBA(104-337:354) ribosomal large subunit pseudouridine synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3FBA  E=2e-47 s/c=0.81 id=34% cov=96%
--------PEDIPLDILYQDEWLALVNKPADMVVHPAKGNWSGTLVNALQWHfrehlstgaGHLRAGIVHRLDKDTSGVILVAKDDLTHRDLAMQFESRKVFKEYVAIAAGELERDSDYIEGALKMHPYDRLKMIVSTDpDAKHALSYYEVLERFR-GFTLVKVQPRTGRTHQIRVHLLHVGCAVLADKIYGGRaqvklseiapgtppaEDEVLLGRQALHAFRLRFQHPRTGQWIEAEAPLP-
>UniRef50_C5RBB6(76-286:305) 23S rRNA pseudouridylate synthase RluD n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBB6_WEIPA  E=4e-47 s/c=0.90 id=32% cov=94%
----------DLPIKILYEDENWLVVDKVAGVTSVPGKADR-ETTMVNRVKGYLISegaedlvPHVVTRLDRFTSGVALLAKHRFAHGLLDKQLQTHTVDKRYYAIVDGIVPDDHGFIDAPIGRMDNDFIR-REVRADGRPSQTEYWVVNRMP-NQTLVKVQLHTGRTHQIRVHFKYIGHPLIGDEIYGGPMDR-GIERQALHAYWLEFYDPFSEIKRHIQSPLP-
>UniRef50_A9B3Z2(1-208:560) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3Z2_HERA2  E=6e-47 s/c=0.91 id=35% cov=94%
-----------MHIEILYRDEQILVINKPTGVATHAPQGDLALTDVERALRAQLQLEYlaIHQRLDRDTSGVMLFALDPAANANLATAFAEHTIEKTYQALVYGVPIQTQGVIDAALAPAGDGMIQVASAHDrRAQSAITHYRVLVSSPDqRFSLLELQPKTGRTHQLRVHCECLGHPIVGDPLY---DVARAAPRLMLHASELRFTHPLTQQPLHIQAPTP-
>UniRef50_D2RJC8(72-280:294) Pseudouridine synthase, RluA family n=2 Tax=Veillonellaceae RepID=D2RJC8_ACIFE  E=8e-47 s/c=0.90 id=30% cov=94%
--------PVHLPLSLLYEDEDLLVVDKPAGMLIHPTWSGARDTLVQAvggyfRRTGQHCGIHPLYRLDRDTTGVLMVAKSAFAKHALTR--DHSQIYREYLAVCEGRWGIPQGRIEHPIGRVAEGVDRWTV-RPDGRPAVTEYRILEENQE-WTVLKIHLLTGRTHQIRVHFAHEGHPLVGDPLYGTKDGR--IARQALHAWTVRFRHPRTGEEILLTAPMP-
>UniRef50_A9BWX6(35-245:245) Pseudouridine synthase n=2 Tax=Comamonadaceae RepID=A9BWX6_DELAS   E=1e-46 s/c=0.89 id=46% cov=93%
----------------LYEDAELLVLDKPSGLLCVPGRGPDKQDCLSGRALQRWPDALVVHRLDQATSGLVVMARSLASQRLLSEAFAQRRVHKLYVAVVAGRPAAQqadaWQSIDLPIAADWERRPLRIIDALQGKPSQTLWRAMPAATEGhdtpTTRVQLQPVTGRTHQLRVHMAALGHAILGDALYADAAVQALSPRLLLHAHQLELAHPLSGQTLRFESAVPF
>UniRef50_C1ZB48(74-310:325) Pseudouridine synthase, RluA family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB48_PLALI  E=2e-46 s/c=0.79 id=32% cov=97%
-----FVPPEPTPLEILFEDDSLLVINKPAGLIAHPTGEIPDG-TLINAVQHYldkqsthpgLERPGIVHRLDRDTSGAMAICKEHLSHRLLSIQFQLGRISKSYLALVEGVLTDDQLVIDLPIGRAPGCSSALMSCRADaleAQASKTSLRVVERFPQHT-LVEAKPRTGRMHQIRIHLATIGFPIVGDEFYLKGGEIRplvwpeservqvslLINRQALHAACLSFAHPLTNEWQDFQAPLP-
>UniRef50_C9KQC1(72-280:302) Pseudouridine synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQC1_9FIRM  E=4e-46 s/c=0.89 id=30% cov=93%
--------PVDLPLDILYEDETFLVVNKPADMIVHPTHRAA-RDTLVHAVAGYFERRgeaagiHPLYRLDRDTTGIVILAKSARIQHAMTK--HHGQIYREYLALAQGHLDCLSGRIDMPIGRD-ITRANHWQVRADGRRALTEYETIASWP-AYSLLKIHLLTGRTHQIRVHFAALGHPLLGDTAYDG--SCDTIPRQALHAWRVHFFHPDTGKEIRIEAPIP-
>UniRef50_B7GAM3(69-293:325) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAM3_PHATR  E=7e-46 s/c=0.82 id=32% cov=94%
---------QDLPLDIIFEDEHMIVINKAANMVVHPAAGNWDG-TVVNALAYYLanrsesisFRPGIVHRLDKGTTGVLVVAKTSQTLATLSNFFAARQVKKTYMAITVGNPGK-HVVIDKPIGRHPLHRQRMRVVPDPHQKNSTGRRALSYvdtlaFDGKLSLVQVRIETGRTHQIRVHLQDRHTPIYGDDIYGLADWNKKLSkthrivRPLLHAYKLEINHPVTGEPMVFKA----
>UniRef50_B9DS29(72-273:301) Pseudouridine synthase n=85 Tax=Firmicutes RepID=B9DS29_STRU0   E=9e-46 s/c=0.92 id=35% cov=88%
------------PLDIVYEDDHFLVLNKPVGYASIPSAI--HSNTIANFIKAYYfeqnypnKQVHIVTRLDRDTSGLMLFAKHGYAHARLDKQLQKRSIEKRYFALVSGNgQLPDFGEIVEPIGRS-KDSIITRTVDPMGKYAKTTYEVVARFAENVHLVDIKLHTGRTHQIRVHFSHIGFPLLGDDLYGGR-MDLGIERQALHCHFLSFFNPFT------------
>UniRef50_A5VLP2(70-283:290) Pseudouridine synthase, RluA family n=13 Tax=Lactobacillus RepID=A5VLP2_LACRD  E=9e-46 s/c=0.86 id=32% cov=95%
--VESSNEP----LNVVYEDDNWLVVDKPAGVTSIPGPTVQN-DTVLNRVKGYLIannsadlRPHLITRLDRFTGGLLLIAKHHIASSMISQQVQQHQMLKEYTALVEGQVMDEHGEINKPIGRKDGQAAR--VIDENGQRALTEYWVEER-GAKWTRVRVRLHTGRTHQIRVHFAAIGHSLIGDHLYGGDTSKY--DHQLLHASKISFNDPFTLKQMTFTSELP-
>UniRef50_A0Y082(10-235:235) Pseudouridine synthase n=2 Tax=Alteromonadales RepID=A0Y082_9GAMM   E=1e-45 s/c=0.82 id=42% cov=95%
-------------FSILYQDNDILVINKPSGLLSLSGKNSENWDSVHYRLVNGQKgltpaflKAKLVHRLDLGTSGIMLVSLNDVSSKHLNKQFQLRSVKKHYVAVLQGCISEDRGQIDAPIAKDTQLFPRVKICKLEGKPAVTEFNVIKRLANPVrTYVHFSPLTGRTHQLRIHSHFIGHPILGCDLYKSAHSEKLSKRLQLHASDLFFEHPTTNQAIHIHCPSPF
>UniRef50_C0X7U3(74-286:297) Pseudouridine synthase n=21 Tax=Enterococcus faecalis RepID=C0X7U3_ENTFA  E=2e-45 s/c=0.86 id=33% cov=94%
---------DDEPIEIVFEDDHFLVVNKPAGIASIPAQYHPSG-TMANRVKGYYKRQnyvnqviHVVTRLDRDTSGLMLFAKHGFAHALIDQELREKKVTKIYYALVGGAIEQlnEHQLIEKPIGRDLSSLLKRQVI-ETGQFASTEYWLAKRGAQAAA-VRIQLHTGRTHQIRVHFEAIGCSLLGDEMYHGKMDQ-GIERQALHCMELIFTHPFTKETVHLISPL--
>UniRef50_A6FXR5(264-509:509) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR5_9DELT  E=2e-45 s/c=0.75 id=43% cov=95%
--------PDDAP-RVVYEDDDLLVVDKPPGMLSVPGRGPRRRDSVEYRLKAranpdaieaavaaqskskppagseartaagprlDQLWPRLVHRLDLATSGLLIAAKHREAYVALQRQFSSRQIGKRYVALVRGPLPDalgEGGEIELPLARDLDDRPRQKVDRREGKVARTRWQLLAHEPEHaASRVALYPHTGRTHQLRLHAAHpegLDAPLVGDLLYGYGEG----ARLMLHAERLTFLHPTRGEPMELRSPCPF
>UniRef50_Q3JQ55(242-460:477) Pseudouridine synthase n=170 Tax=cellular organisms RepID=Q3JQ55_BURP1  E=2e-45 s/c=0.84 id=34% cov=94%
-------------FEILFEDDAIIVLNKPAGVAVHGGSGVAFGVIEQMRHARPHAKFlELAHRLDRETSGILMLAKKRSALVGLHEQIRENRMDKRYFACVHGDWAADWGRRRvvkAPLFKYATPDGERRVrVQEDGLPSHTVFNLVDRWPD-YALVEAELKTGRTHQIRVHLAHLGLPIVGDAKYGDFALNKALaranavpsiKRMFLHAHRLRLAHPLTGEPLQFDAPLP-
>UniRef50_B8GX34(93-300:331) Pseudouridine synthase n=7 Tax=Caulobacteraceae RepID=B8GX34_CAUCN   E=3e-45 s/c=0.88 id=35% cov=92%
---------------VLYEDEEVLALNKPAGLAVQGGtKTTKHIDKLLSAWGEGVDRPRLVHRLDRDTSGVLLLGKTPSAAARLSGAFAKRKAQKTYWAIVAGNPHPTEGVMELHLAKRGVGDRELVVpaqpKDPDAQPAETEFVTISRAGPRVTWMALRPHTGRTHQLRAHMKAMGHPILGDPKYGDEKSAPLSEGlkLQLHARSILLPHPSAG-MLHIEAPL--
>UniRef50_A1AW00(76-298:314) Pseudouridine synthase n=2 Tax=sulfur-oxidizing symbionts RepID=A1AW00_RUTMC  E=4e-45 s/c=0.82 id=37% cov=95%
---------QDIVIDVVYEDEAIIIVNKPVNLVTHPGVSNWTGTLANALLHYDsslanLDRAGIVHRLDKNTSGLMVVARSEYAQKYLTRQLQTHSISREYSAIVYGHMIS-GGTVDKPIGRDPKDRIRQTV-TESGKDALTHYRVIERFAHHT-HVKVMLETGRTHQIRVHLSFIGHPLIADPMYGGkirfpkkadkqlKNSLKNFNRQTLHAKKLTLIHPTSTELMSWKVPLP-
>UniRef50_A6GP31(103-318:335) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GP31_9BURK  E=4e-45 s/c=0.85 id=35% cov=94%
-------------LPILFEDEHLLVVNKPSGMAVHGGSGSSFGliECIRALRAETHQDLELVHRIDRETSGILIISKKRSALRKLQEQLRARSWKKYYKTLVLGHWPEALRQVDLPLLKTQSSEKEARVfVDESGDKACTKFKVIQCYKSSYssfTLIQAQILTGRTHQIRVHTSANKFPIAGDDRYGNFEmnkqlARQGLKRMFLHAARLQLVHPATNETIVLEAPL--
>UniRef50_C7PHX6(362-570:570) Pseudouridine synthase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHX6_CHIPD  E=8e-45 s/c=0.87 id=45% cov=94%
-------PETVGELDIIYQDESVVVVNKPSGLRSVPG--VTIQDSVYTRLKHALGDIEPliVHRLDMDTSGLLVVAKTQAAHKHIQRQFLQRTVSKRYTALLSKVIDTSEGEIDLPLTADLFNRPRQIVCFTTGKKSVTRWKVVTRY-QAMTKIDFWPLTGRTHQLRMHSAHplgLNAPIVGDDLYGTA-----AERMYLHAAHIEFTHPLSRQRISFDAPVTF
>UniRef50_C0F0M1(80-298:306) Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0M1_9FIRM  E=8e-45 s/c=0.83 id=32% cov=92%
-------------LHILYEDEDLIFVDKPAGIVSHPSKGH-LSDSMINGVQAYFEnegreknersNIHLIGRLDKETSGILGIAKNSVTAERMIKQRQRGILIKEYYALVKGNPPE-EGILEIPMeemrdARDGDKLKMKVGKSENAKTAKTFFQVVKRF-EKFSLVSLVIETGRTHQIRFHMASIGCPLLGDSFYGDG-PELGISRTALHAQQLTFTHPFCEKVMRIESEMP-
>UniRef50_A0L8J2(101-311:328) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8J2_MAGSM  E=8e-45 s/c=0.86 id=34% cov=91%
----------------LHRDGWILVLNKPAGIPVHGGSGHQWG--VVDAVRASLEklgieaQAELCHRLDKETSGLLLFGLRPRAVRLLTEAMRENQVTKTYLTLVQGVPAARQGVINQPLSKGNVRGGERMVVVEqGGQRAVTHYRVLRSYGV-ASLLEVQLETGRTHQIRVHMQWLGHPVAGDGKYGDKAFNkwmreRGLKRLFLHASELAFRHPENEQKLAYQAPLD-
>UniRef50_UPI00016C4782(56-266:275) RNA pseudouridylate synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4782  E=9e-45 s/c=0.86 id=32% cov=95%
-------PPSASGLEIVHEDAHLVVIDKPSGLLTVATESEKLDTAFVrlsDYLRARNaGRPFVVHRLDRDTSGLLLFARSAEVRDQLQGNWEE--LTKTYLAVVEGRPESSEGGVENYLTEGRDLRVRASPRPgPDGKRAASRYTVRQTRG-GYSLVEVEIETGRKHQIRVHLAGLGCPVAGDKMYG--ATTDPVRRLGLHAWRLSFDHPFTLERLELEAPLP-
>UniRef50_Q30SG9(75-290:323) Pseudouridine synthase n=5 Tax=Epsilonproteobacteria RepID=Q30SG9_SULDN  E=9e-45 s/c=0.84 id=32% cov=93%
--------------EILYEDDDILVINKPTGLTVHPAPSVKEATLVDWLKHKGMrlsslsgeERHGIVHRLDKGTSGAMVIAKNNSTHEFLSDQLQDKSMGRYYLAVINPPLKDELTEVIFPIARSSHNRLKMA-PLEHGKYAKSAFKVLAYSNDEAnQLIACKLYTGRTHQIRVHLESLNRHIVGDHIYAQSPKQEKSERILLHAYIIYFIHPKSKERVSFVASLD-
>UniRef50_A6CF60(78-304:317) Pseudouridine synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF60_9PLAN  E=3e-44 s/c=0.79 id=33% cov=96%
--------PEPLPLEVLYEDAWLIIVNKPPGMIAHPA-GNILSGTVANALQYYLDqqtgvrsllRPGIVHRLDQFTSGILIVAKEHLGHRSLSIQFQQNRVSKSYLAIVRDQPKQDLFENNDAIGEHPTQAGVCMTTHPEalrAKAAFTRFEVVERLPGH-SLIRAFPKTGRLHQIRVHLADLGFPIIADDFYGNDarllDDRELISRQALHAEQIEFSHPVTSLRMNISAgvPADF
>UniRef50_C6BRU5(3-213:214) Pseudouridine synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRU5_DESAD  E=3e-44 s/c=0.85 id=44% cov=94%
---------DEKLLDIVYADRKIVVVNKPSGLLSVPGRGPENQDCVVTRVQKMFPECRkfpAVHRLDMDTSGLLVLGLTARAVRELMEQFQKRQVKKRYEALLEGIVKEDSGVIEMAFRLDPYNRPYQVYDPIHGKLGITHWRKLGVE-NGMTRVEFTPLTGRTHQLRVHSAHpqgLGCPIVGDRLYGSGTEPGQLK---LHAGYLCFEHPKTKEKMEFEiAPL--
>UniRef50_C2D7A7(80-308:338) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7A7_9ACTN  E=3e-44 s/c=0.79 id=28% cov=95%
-------PNASIPLDIRYEDDYLLVISKQTGLVCHPSPGHVDDTLSNALVAHCGYEHlgllqgddrpGIVHRLDMDTTGLMVAAKDNTTQQALQDLIRLRVFDRRYIVLVQGYVTPDEGTITTGIARSKKNRLKMCISKDPAsREAITTFKTLERFEagskdDGYSLLECHLYTGRTHQIRVHMRYVGHSVVGDPLYGRKGDalNQGLQRQFLHSWRMSFDHPITHEHLQF------
>UniRef50_B4U613(75-296:308) Pseudouridine synthase, RluA family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U613_HYDS0  E=5e-44 s/c=0.81 id=34% cov=93%
---------QDIHIDILYEDNDLAVVVKPSGMPSHTGPGHDENTLVNALLAKfgdlsvigGVERPGIVHRLDRYTHGLMVIAKNDVSHQKLSLMFKNKEVDKHYKAIVYGISRFKEQTIETFIRRHPTNRLKFEVANE-GKLAITKYS-LEKPLKNASLLDIKIYTGRTHQIRVHMSYIGHPIVGDTLYGYKHsyfdktlEHMIGKRFLLVAYKLSFLHPKSQKPMEFE-----
>UniRef50_D1RB93(67-272:283) Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB93_9CHLA  E=7e-44 s/c=0.87 id=35% cov=93%
--------------PILYEDAHLVVIEKPAGLLSVATNFDKAKTAHAFLKERYRPRKvYVVHRLDQDTSGVMLFALTGEAFFGLKALFADHDIDREYTAVVHGKMTQQEGTWQSYLYEDKAYVVHSTQDPDKGELAITHFKTVE-ARTHFSLLNLKLETGKKNQIRVHCEDHGFPIVGDKKYGGEGESHITKRLCLHAHHLGFVHPIYKKEMSFDSPIP-
>UniRef50_A3ZV48(35-264:281) Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZV48_9PLAN  E=8e-44 s/c=0.77 id=39% cov=94%
------------HLDIIYQDDRIAVINKPAGMITHPAKGHWKG-TLTEGLKGQFPqlstiggptRPGIVHRLDRDTSGVIVIAKDDAAHEFLKTQFQDRLTEKEYFAMVIGAPDRDRDLINEPVGPHPKIRERMAIRRgdDEGKDAQTFYEVLERY-QGFAAIKALPKTGRTHQIRVHLMHAGHPVLCDPLYGSRrflslgelqhddDRTVLLNRTALHAHRIAIAHPDDGEIREFIAPLP-
>UniRef50_B2KBB0(77-291:299) Pseudouridine synthase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBB0_ELUMP  E=1e-43 s/c=0.83 id=36% cov=90%
---------------IIFEDKNMFVINKPSGMLVHPQSPVWEENpaaafigeeTLVSLILANPPKNFekgitragLVHRLDKDTSGVMIIAKNSKTQDAMVEMFANREMHKTYEAIVCGVVPDDKGIINVPIGRVTGGKIK---ASELGREAVTEYSVLQR-KETVSLMKLHPVTGRTNQLRVHMSWLGYPVLGDWLYKG----ATAPRLMLHSKSAEFEHPFTSKPVKFTVapPKDF
>UniRef50_A6NVX8(73-285:299) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX8_9BACE  E=1e-43 s/c=0.84 id=33% cov=93%
------------PFPILYQDRDLIAIDKPAGLLTVGHEGERQRTAyrLLADTLRDGsreKKLFVVHRLDRDTSGAVLFARNEEMKRALQEDWDSLVKERIYLAVTVGAPEREEGVVRSWLRETSTRVVYSGGPGSGAKEAVTRYKVLARSGE-YALVRVALDTGRKNQIRVHMADLGCPVAGDKKYGDGSG--PMDRLALHAVRLTITDPRTGAPLTVTAPVP-
>UniRef50_C7LR44(13-222:243) Pseudouridine synthase n=6 Tax=Bacteria RepID=C7LR44_DESBD   E=1e-43 s/c=0.85 id=35% cov=93%
----------PPGLVIIYEDRDIIVVNKPAGMLTMATETEKTRTayyALTDYVRKGNaksrYRIFIVHRLDRETSGIVLFAKTEVAKRTLQDQWED--TTKIYAAVVHGQMGKASGMLSSHLVESGVHKVYATRDAALGKLARTAWTVLKERG-GYSLLDVTLLTGRKHQIRVQMADAGHPIAGDKKYGVKG--DTFSRLALHARSITFAHPFSGRSMTLDAPVP-
>UniRef50_Q89AH2(94-305:315) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Buchnera aphidicola RepID=RLUC_BUCBP  E=3e-43 s/c=0.83 id=36% cov=94%
--------------MILYEDNYFLILNKPSGMSVHSGSGINYGMIENLRILRPYNRYlDLVHRLDRDTSGVLIIAKKRSILRNLHEQLREKKIKKKYVALVHGVWPDILKSISKPLLKTSSRKNKNIVkIDPKGKESITHFNIKKKYTKNT-LISITPITGRTHQIRVHLLHLNYPIVLDAKYGIKKLDYFIKnkfninRLLLHAESINFFHPKRKKNILITAPLDY
>UniRef50_C8Q1E7(37-243:243) Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q1E7_9GAMM  E=5e-43 s/c=0.85 id=46% cov=92%
----------------LYRDDDIWVIDKPHGLLSVDGK--ELKVSLQSRLLKADPNVKLIHRLDMDTSGIIIFARHSEAQTHISKQFIDRIPSKEYQALVWGTP-PQQGEIDVPVRYDPPQKPKHIVDMSWDKRAYTKYETLHhelREGKAVSRVALYPVTGRSHQLRVHMLHIGHVMLGDPIYAqdvlNGQAFDLSPRLCLHARKLRLKHPNTGVWMEWESPVPF
>UniRef50_UPI000178A5E6(72-286:302) pseudouridine synthase, RluA family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A5E6  E=6e-43 s/c=0.82 id=34% cov=94%
-------EPRWQELQVLYEDDFCLVVNKPAGLAVHP--DNESRETTLNHVVAAYYEaegihaaVRHIHRLDKDTTGPVLYAKNEYAQLKLDEAMREKKIVRMYAAIVQGRVSQELKRIDLPIGKDRYHASRRRVSL-TGQAAITHILSAEAYPK-ASLLHIRLETGRTHQIRVHLSHMGHPLLGDVLYGGPGTFA---RQALHGERLLFHHPFTGESIEVPAPWP-
>UniRef50_D0KW62(23-222:222) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW62_HALNC  E=6e-43 s/c=0.88 id=44% cov=92%
----------------LAETADFLIIAKPTRMLTQPGKEAHKTDSLITRVNQEFPEARIVHRLDWDTSGVMVLARHARAHRALSIAFQDRRTKKCYIAHVDRAPAPPQGLIDRPIGSDREHRPRYRIDEEQGRPSQTRYVVLNETAD-FARLALEPITGRSHQLRVHLLSIGHPIQGDTLYHPHAQN--HARLMLHAESLSFPDPASGITQTFSDPVPF
>UniRef50_Q6KHW4(73-285:298) Pseudouridine synthase n=1 Tax=Mycoplasma mobile RepID=Q6KHW4_MYCMO   E=7e-43 s/c=0.82 id=25% cov=94%
---------QNINLDIVFENEDFLIINKRSGMVVHPAPGNMQDTLVNALLFHfknnlsninGEIRPGIVHRIDKDTSGLLLVAKTNEAHNYFALLLKKHQIERKYQAIIVGKMDHTITNINLPIGRNTSSRLKMEVTAHNSKEAFTKITSLK-ASETHSLIQCELKTGRTHQIRVHLAHINKPIYGDNIYGKKVDDFN---QRLHAYELSFTY-KDNKQYSFNVPLP-
>UniRef50_B0S119(73-289:307) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S119_FINM2   E=1e-42 s/c=0.81 id=30% cov=95%
---------QKHDLDVVYEDDYLAIINKDKDVIVHPTETI-YSDTLVNYLMYNFKnlsdvdgdyRRGIVHRLDKDTTGLIIIAKDNDTHLKLKEIIKNHEIIKTYLCIVHGKIDE-SGTIKEYMTRNPKDRKKMMVSDE-GKLSISQYERLDYN-DDYSLVKVQIKTGRTHQIRVHMNYIHHPILGDKLYGLKKEKILFDSQVLHAYNLQFIHPQTHEKINVigKLKPDF
>UniRef50_B8CQ92(19-249:278) Pseudouridine synthase n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CQ92_SHEPW  E=1e-42 s/c=0.76 id=32% cov=93%
-----------PHIEILFEDDDVVAIHKPAGLLVHRSYLARRERFFAMQLTRDkvGCHVFPVHRLDRPTSGILLFAKSSEMANALCEQFAAHSIDKEYLAIVRGNMHEAATLDYALKEELDDVADKDVDPNKAAQDAITSYKPLlnseipyasgRYATSRYALVHLSPHTGRKHQLRRHMAHLRHPILGDTTHGDGKQNKffrehfGINRLWLIAKKLSFNHPRTGERVAVE-----
>UniRef50_C6J8T7(107-333:349) Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T7_9FIRM  E=1e-42 s/c=0.77 id=35% cov=94%
-------------LNILYEDTDILAVDKPAGMVTHPT-GMHYTDSLSNLVAGYFREKneqvcvRPVGRLDQETSGIVVFAKNQVAASRLQSVKSPCKIHKQYLAAVSGTLPVDmpgvWHTLDLPLMQDPENHLKMKTAADlslhssalsgKIKTAVTHYHTLFSSQD-WSLITLKLDTGRTHQIRVHMASTGHPLLGDTLYHSDDkisSCASFSRAALHAWKVSFQHPFRDEMLLLEAPLPF
>UniRef50_Q1WSL9(71-284:295) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=Q1WSL9_LACS1   E=3e-42 s/c=0.81 id=32% cov=95%
------VPPSFVPIKILYEDDNYLLVDKPAFVASIPSPLHPN-DSLVNRVVGYYQirgyrgiIPHIVTRLDRDTSGIVIFAKHRYAHALLDSQLKEHKISKTYTAILSGILHNNHYIIDLPIGRDSTSLIKRKVLfSEKAKRSKTEIFVEERIRDNT-LCKIKLHTGRTHQIRVHCSYLGYPLVSDTLYGGTIS-MPLQRQALHCSEVVFWDQFSSQYIKVKS----
>UniRef50_A8VZ12(90-301:305) Pseudouridine synthase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZ12_9BACI  E=3e-42 s/c=0.82 id=31% cov=94%
------------PLSIRYEDEWCIVIDKPAGLLTIPNETYEN-DSVAGRVIGYFKSCdhpatfHPVTRLDRQTSGLMLIAKDRHSHSLFMKQQCAGLIDKEYVAVTPPGFPWIAATVDAPIARHPDSIIERMVHHEGQKAKTRLVKVNENASG--SLIRCKLETGRTHQIRVHLAFTGWSILGDGLYREEKSADEHKRTLLHACSLRWDEPFTGERIEIHesVPEDF
>UniRef50_C7PP03(7-225:247) Pseudouridine synthase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PP03_CHIPD  E=3e-41 s/c=0.78 id=36% cov=92%
---------------IIKETADFVILNKPAGMLTIPDRHDNQLDSLQGLLKKHYGEIFTVHRLDKDTSGVILFAKNEVAHKYYSQLFEGRNVKKFYKGLVNGQLHPETGSVDEAIMEHPTIKGR-MVTNRKGKNAQTDYQVLEAFGL-YSLVQLQIHTGRTHQIRVHMKHLGHPIAVDELYGTaapvylsaikknyklgkrvEEERPLLSRLGLHAWQLQFKD-QQGEENVIEAPLP-
>UniRef50_B4UM41(84-288:302) Pseudouridine synthase, RluA family n=4 Tax=Anaeromyxobacter RepID=B4UM41_ANASK  E=4e-41 s/c=0.83 id=42% cov=91%
----------------LYADADLCAVDKPAGVPAQPtltTDRGALPELVSALLGA---PVTLVHRLDRETSGVTVFARTRDAAAALAEAFRTGTPEKTYLALCARAPSPAEGRVALALGKDPARPGLRRVD-PAGDPAATRYRTLREAPGG-ARVEARPETGRTHQIRVHLAALGAPLLGDARYGGPRrvGEVAVPRVMLHATRLELPHPATGARMVFEAepPEDF
>UniRef50_B1X0W4(67-302:304) Pseudouridine synthase n=2 Tax=Cyanothece RepID=B1X0W4_CYAA5   E=4e-41 s/c=0.72 id=31% cov=94%
-------------FDLIYEDHHILVINKPSGLPVLPG-GGFLEHTLLGQLKKQYPKEkvFPIHRLGRGTSGLMLMGKTAIARSHLTRQMREHKMRKVYRTLIGENNLPDYFNIEHPIGKiSDPVLGYIYGAKADGKDAYSQCQIIERYSDKT-LVEVTILTGRPHQIRIHLATIGYPLLGDPLYvvggipktGFKEQKETVNvpgdcGYFLHAYQLSFVHPATHQCLTFTCEREF
>UniRef50_A7VVQ2(69-281:298) Pseudouridine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVQ2_9CLOT  E=8e-41 s/c=0.79 id=30% cov=91%
--------PEALPVSVLWEDDALLILNKPPLMPVHPCPGHDRGTvcnfvSYYQKRKGEDWRFRPLNRLDKDTSGLVIGAKDSYTASALND------VGKTYFAVCQGSL-PGEGVIDTPI-RLKEGHSIQREAGEGGKPAVTHWKSLAQgaaAGKSYTLLALTLETGRTHQIRVHLSSIGHPLAGDDFYGG--SRELISRQALHCGLVELTHPFFLSRICVKAP---
>UniRef50_C0CMK8(73-303:310) Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMK8_9FIRM  E=2e-40 s/c=0.73 id=34% cov=94%
---------EEP--RVLYEDESLVVVEKRSGQVCHPS-GMHYRDSLANQLVWHFQNRqentsvRIIGRLDKDTSGIVVAAKHKIAAQKLSWQRDRGIFGKEYLALVHGEFSDFDGFLREPIARVQGHPLKMKVCAQ-GKPAKTQYHVIAQNR-GYALVSCRLYTGRTHQIRVHMQSIGHPLVNDVIYGLGEQDDFAktleneqkiagdrhKKLGLHAAKVWMRHPLSGEELILESACDF
>UniRef50_Q9ZL98(75-294:327) Uncharacterized RNA pseudouridine synthase jhp_0682 n=15 Tax=Helicobacter RepID=Y745_HELPJ  E=2e-40 s/c=0.76 id=25% cov=95%
----------DLEIEVIFEDEDLLVLNKPPNLVVHKAPSVKEPTLVDWLKSQNYelsnlglkERYGIVHRLDKDTSGGIVIAKNNFTHVCLSEQLKTKMMGRYYIALLSTPLKEEKMSVECYLTRNPNNRLKMIALkaakKEKSRYSKSEFTSLLTSQNGMDLIGAKLFTGRTHQIRAHLEYLNRHIIGDNLYGLNGVLSKEEiRIMLHAYLIEFKHPRSEQKLRFKVPL--
>UniRef50_Q6Q916(74-297:311) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q6Q916_9GAMM   E=2e-40 s/c=0.75 id=30% cov=94%
--------PEEIDIDVIYENDDYLIINKQPNLIMHPGAGCSSGTLANALLHHYPElkniaRAGIVHRLDKDTSGVILVARNDKFRNYFVDLLQKREVTKLYSAIVVGTIIGSFKVTD-PIGRDKKNRVKMSI-RSDGKESETFVKLKESLG-NYSLLDISIMTGRTHQIRVHLSSKKLPIIGDNTYNPAKNIAKgtssklidiikqFPRQALHAYQLSFKDMHTDEFKTFNC----
>UniRef50_A3VN52(97-298:324) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN52_9PROT  E=3e-40 s/c=0.83 id=32% cov=91%
---------------VIYEDDDILALNKPAGLAVQGGaKTLIHIDGMLDVFGEGEARPRLVHRLDRDTGGVLLLAKSRAVAATLSLAFQQHRIGKTYWAITKGVPHPLFGRIDMRIEKAGEPGREKMRGTEQGQSALTDYQTVETAGQKAAFLALRPHTGRTHQIRVHLSAIGTPIVGDRKYGGAGAvlEGLPNQMHLFCRQMHV--PRRGRpPLVVTA----
>UniRef50_B3WCK2(72-284:300) Pseudouridine synthase n=8 Tax=Lactobacillus RepID=B3WCK2_LACCB   E=4e-40 s/c=0.78 id=31% cov=94%
--------PYSHDLAISYEDDDYLIVNKPAGVASIPAVG-RQNNSMANMVKAYLIKTkaesqavHVVTRLDRDTSGLMVFAKHGLAHSLLDQQLHSQDFVKQYVAIvTAQTPLATHGWIVLPIGVSDGFYMR-RVVTDTGKASVTEYRTLDQNKAGAMML-VTLHTGRTHQIRVHFAAIGHALYGDGLYSPDTH--GFNRQALHCAHLRFWQPLKHKLIDLHAPLP-
>UniRef50_Q31IZ8(10-232:252) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q31IZ8_THICR   E=5e-40 s/c=0.74 id=32% cov=94%
-------------FKILYQDDSLVAVHKPAGLLVHRSPIDRHETQFAVQMTRDqiNQKVYPLHRLDKATSGLLLFALDSNTARLMGQQFEEHTIQKHYLAICRGWTAEHGEIDHALKHKLDKLGDRHAQTNKPPQEALTNFERLattdvmhkigKFDSQRYSLVKLMPKTGRKHQLRRHLNHISHPIIGDVKYGDRHHNHFFntwlgqHRLYLAATSLTFNHPQTNARMTLNAPLE-
>UniRef50_Q30SZ1(2-224:241) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=Q30SZ1_SULDN   E=5e-40 s/c=0.74 id=35% cov=94%
-------------LEILYQDEHLVAINKPSGLLVHRSPIDRHETEFAIQTLRNqlGRFVYPIHRLDKPTSGVLLFALDKESAKIMGEKFMAHEAKKSYIAVVRGYTLQSGEIDYALSIKFDKIADKDSSSDKEPQEALTHYKRLatveldfevgKYDKTRYSLVKLNPLTGRKHQLRRHMKHISHHILGDTKYGRGEHNKLIrqefgcHRMLLHAIALEISHPYTKELLYIKAPLD-
>UniRef50_UPI00016C40E0(7-226:238) pseudouridine synthase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C40E0  E=6e-40 s/c=0.75 id=35% cov=94%
------------PLAVLYEDHHLVVVNKPAPLLTQaPPGVPNLEERVRAYIKDKYAKPagvylGVPHRLDRPVSGVVCFARNTKAAQRVHSQFEHRSVRKVYWALVEGVVEPDAGVWDDYIRKveNEARAARGHEGEPGAKLATLEFRVLERFAAHT-RIELHPLTGRMHQLRVQSAWRGHPVIGDSLYGsvrpfGPPAELPRDRvIALHARRLTFEHPFTKQELVIEAPVP-
>UniRef50_Q54N28(429-697:718) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54N28_DICDI  E=8e-39 s/c=0.60 id=34% cov=94%
--------------SVLYKDEHIIVLNKPQGLSVQGGTGlNKHLDMMLSHLRFEKDENpKLVHRLDRNTSGILILGRSKLAASAMTKKFElklvkenkkdkddnnnnknnknnnkndskrlfrekevfnnnknkdeenenySKGIKKTYWALLGSTPTPKEGRIRAPLKKVVVGGFEKVVPTlttgDGAKIAITEYKVLESSLTKHCFISLWPETGRTHQLRVHCASvLNTPIIGDPKYGDKESDSNLKdllpypsKLHLHARRIEFIHPFTNKKIDISAPLP-
>UniRef50_A9BZ16(45-264:319) Pseudouridine synthase n=9 Tax=Burkholderiales RepID=A9BZ16_DELAS   E=1e-38 s/c=0.73 id=34% cov=92%
-------EPDDAPLHILWRDEHLVAVYKPAGWLVHRTGLDAHETRFVLQTLRDqlGCHVYPAHRLDKGTCGVLVMALHAQAAQRLGQAFAGQEVRKQYLALVR-------GWLPDAVEVDHALRPDDAPEDAPAQPAQTSLRCLARlewpeafdprhAATRISLVEALPATGRRHQIRRHLKHVAHPIIGDATHGKGPLNRwwaerlGLQRLWLHAHALELAHPMTGEPLRFEA----
>UniRef50_B9XQ50(18-251:269) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XQ50_9BACT  E=1e-38 s/c=0.69 id=33% cov=94%
-------------ISVLYEDEHLLAVDKPSKLLTSPDRYDPKRPNLMKLLHAGIERGTPwaksrgltylmnAHRLDFETSGVILLAKDKPMLVAVANLFGSEKPVKTYSALVQRSPEEKSFEVDAKLAPHPVKLGLIRVDEKNGKRSRTQFELVEKFA-GYSLLKCRPLSGRQHQIRVHLQYAGLPIVGDSLYGGqplmlsslkrdyrlkpnKTERPLLDRVSLHAEELSLVHPLTNAEIKIVAPWP-
>UniRef50_O66114(7-211:219) Uncharacterized RNA pseudouridine synthase ZMO0505 n=10 Tax=Sphingomonadales RepID=Y505_ZYMMO  E=4e-38 s/c=0.78 id=33% cov=92%
---------------VLFIDAEAMIIDKPAGLPVTSVRDGslSLENYLASLCFGFKRWPSIVHRLDRDTSGCLLLARNPKMHRRLSEAFSQGQVKKCYWAILEGVPEKNEGIIDLPLLKISSPKSGWRIVADDkGKRAVTHWEILAKNKGR-SLVAFRPETGRTHQLRVHAAtGLGLPIVGDPFYGSHKDE-NISRMMLHAHSLEIAR-LEKKPITAEAPLP-
>UniRef50_B9E7W2(78-270:273) Ribosomal large subunit pseudouridine synthase homolog n=4 Tax=Staphylococcaceae RepID=B9E7W2_MACCJ  E=8e-38 s/c=0.82 id=32% cov=87%
-----------------YEDEYLAILVKPKGVKTHPNDMSESNTLLNHAIYTlDSEYVEPIHRLDQETVGLLLVAKNPFIKKILDRMLEERLIKRTYRAKVKSHLPLKHQTIDMPIGKDKFHPNKRRVSQ-TGDRAVTHIVSSKANRDGTADVELQLETGRTHQIRVHLAEIGHPVIGDPLYSD----SHLRQLALESYKLEFIHPFTGETVT-------
>UniRef50_D1BN73(76-315:324) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BN73_VEIPT   E=8e-38 s/c=0.66 id=28% cov=92%
-------------LDIIYEDEYILVINKAAGILMHPTSTIRDHTLANGVLHYYqetnqHYDFHPVHRLDKDTSGIVIIAKTSVVQHAFDK--KHTHFYKSYDAIVEGHLPSVPISINWPIGR-KPGSIIERCCTVQGKPARTDITIISKNTSKissgkinsddvitlnnnsnicstdssltsysqFTHVKCLLHTGRTHQIRVHLSQLGYPLAGDDLYGGHLE--SIQRQALHAARVSFYHPITNEWLELHAEMP-
>UniRef50_Q2W0L6(3-213:229) Pseudouridine synthase n=4 Tax=Alphaproteobacteria RepID=Q2W0L6_MAGSA  E=2e-37 s/c=0.75 id=28% cov=95%
--------PDEILSRVLYKDQDVIVLDKPAGLAVHagPNSPDHLELYLGALAFGWAEMPKLAHRLDRDTSGCLILGRHAKAIKRLGKMFEHRRVEKVYWSVSHGSPAADSGTVDAPLLKVSARGQGWRIkVDPAGQPSITDWSVLGR-SDGLSWIEWRPRTGRTHQIRIHAQYLGCPLLGDAYYGPDPEPKV--RLHLLARAVAFPALApSKDPVRVTAPPP-
>UniRef50_UPI000196C65D(71-269:282) hypothetical protein CATMIT_03019 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C65D  E=2e-37 s/c=0.79 id=30% cov=89%
--------PVDIPLKVVYEDDYLMIIDKQPNLACIPVKK-YLTESLGNAIMYYYKVNHIesaihlVNRLDKETSGLMMIAKSRYVHDAFSHDI--KQVKRVYHALVKGNP--GQGTVNAPI-DHAEGHGTKREVREGGKEAITHYRTIKTTGE-YSLVECKLETGRTHQIRVHMAYLGCPLVGDPLYGEGEGF------YLDSVEIAFRHPITQQCMTLK-----
>UniRef50_C6E472(76-269:302) Pseudouridine synthase n=4 Tax=Geobacter RepID=C6E472_GEOSM   E=2e-37 s/c=0.81 id=33% cov=87%
-----------PELDILFEDSWIISLNKAPGLSVHRTEDPDEVNLVdlaetLLQKRDGVGRLRPVNRLDKGTSGAIILAKSAVAAGMFGKMVQEEGLGKLYLALVEGKLQK-QGVIDAPL---------------DGKESQTSYLRLFH-GGGVSLLAVYPITGRMHQIRQHFKMIGHPILGDKRYGGR-ALTGFTGHALHSFKTTLVHPATGEEVNIPAPLP-
>UniRef50_A9GP63(12-252:666) Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GP63_SORC5  E=2e-37 s/c=0.66 id=37% cov=89%
---------------ILAEDGDLIVVDKPAGLSTH-APEAERIDDMVTRLRAFLRGRgdaeaylGIHQRLDRDTSGVLLFTRRREANAAVARQFEGRTVQKTYVaAVSGFGDRPPRGTLRHRLVPAPGGAMRALAESGGAREdraakredraagredraakredraasgvlAITRYRLLERRGDR-ALLELRPETGRTHQLRVQLAAIGLPIAGDPLYGGPE----APRLLLHAAELRLDHPATGAAATFRS----
>UniRef50_B4RVP9(24-245:265) Pseudouridine synthase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RVP9_ALTMD  E=3e-37 s/c=0.70 id=32% cov=94%
---------QPLHLPVLYQDEHIIAIDKPPGLLVHRSPIDKHETVFAVQTLRDqiGQHVFPAHRLDRPTSGVLVFSFSADTAAKLGKQMMDKQVVKQYHAIVRGFVHHTGYIDYALKYRYDKIADKHKRPQQPPQPASTMYEslakfdvpepVGRYQSARYSLVRLSPSTGRKHQLRRHMVHIRHPIIGDTTHGDGKQNKFAKshfnftHLALSCTQMGFSHPVTQKWITI------
>UniRef50_C8WWB4(86-285:303) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWB4_ALIAD  E=6e-37 s/c=0.78 id=38% cov=88%
-------------IDILYEDDEIVAVNKPVGVLTHPADG-EYKTSLAAQVeayvydrgaREGAFRAAPVHRLDRNTSGVVVFAKTARAAKAWADAFHRGEVEKEYLAIVEG---EWSGRGRVAVDVRREGNV-TRVVDDSGKPSETAYEVVASSR-GTSLVRLHLLTGRTHQIRVHMAHLGHPLLADRKYGARPIRGES--FYLHAHRVRWN------QVHVTAPLP-
>UniRef50_B9XDK1(16-247:283) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XDK1_9BACT  E=1e-36 s/c=0.67 id=34% cov=94%
-------------IPILYEDRSVLAVDKPAGWMLAPDSWDKTGRNLQLALQsslnagdfwahsRNIKFLRYVHRLDAETTGVLLLCKSLGALRAYGELFETRSVEKFYLAVVQGIPKQSEWTCKLPLIADPVVKGKMQVVTPGKplpksdprgpqaelKDAETHFRVIQTLQDK-ALVEAQPMTGRTHQIRVHLAASGHPIVGDPLYGNAPaaASKGAQIIALRAIKLIYWDPFQKRQIRIAAPTD-
>UniRef50_C6JLM4(69-279:289) Pseudouridylate synthase n=2 Tax=Fusobacterium RepID=C6JLM4_FUSVA   E=1e-36 s/c=0.73 id=28% cov=91%
--------PMEIPIKVAYEDKNILLIDKEPYIIVHPTQK-KVDKTLANGVVNYFLKttrkimvPRFYNRLDMNTSGLIIVAKNSYAQSFLQE---KGIVNKFYKAIVKGIIEKDEFLIDKPIGKVGDDLRRREISVEnGGQEAQTKIKVIKRLKD-LTLIEAELLTGRTHQIRAHMALEGYPLLGDELYGGEDKR--AKRQMLHSYKTQFSDIETGELKTVE-----
>UniRef50_Q1N5G6(8-222:236) Pseudouridine synthase n=1 Tax=Bermanella marisrubri RepID=Q1N5G6_9GAMM  E=1e-36 s/c=0.72 id=33% cov=90%
--------------SILYQDDDLIAINKPSGLLVHKSWVAKDAKEFALQIVRDmsGKHVFPVHRLDRPTSGVLLFGFSGEIAQQVQAQWE--QANKTYWAVVRGWLKEQTLVDHA-----LKGMADYGQDVEIVQEAQTHFKPIdyveidaeidRYPKSRFSWVEAKPKQGRTHQIRRHLKHLSHPIIGDARYGKGKYNRYItehydcPRLLLHHQQLEMTHPVSGSKLMITAPLE-
>UniRef50_Q2GKG0(78-274:297) Pseudouridine synthase n=4 Tax=Anaplasma RepID=Q2GKG0_ANAPZ   E=3e-36 s/c=0.78 id=30% cov=90%
---------------IIYKDENIIAINKPAGVNVQGGTKVSISLSDLLNKIIPGEQLHIVHRLDRDTSGVLIIARGQSIARILSEELRFRRVRKEYIAVTKGVPAFSKGEITMPIYCKKQSGVGETLIP---KEAKTVFSVLQ-SSKRHAVMLLSPVTGRKHQLRIHLSQFCCPIIGDTKYSKDTEVQQHNSLHLHAFRTSFQ--LFDREIVIKAPVP-
>UniRef50_C4XN86(117-322:339) Pseudouridine synthase n=2 Tax=Desulfovibrio RepID=C4XN86_DESMR   E=4e-36 s/c=0.74 id=28% cov=91%
-----------PALEILHEDDELLVVVKPAGLPVHPGSGHTFalTTLLHAHAPHAPFKPTPAHRLDRDTTGLLLVAKSYRRLRALHEAMQDGTLRKDYFAWVWGKWllgeENEWVTMRDALAKSGGPGRERVTAGEDGKEAVAKVRLISRAPT-ASLVEVRLETGRTHQIRAQLASRGYPLVGDAKYGGGPT-----PLRLHAWRVILPEEAYCVPPDWEAP---
>UniRef50_B4D5D1(7-235:265) Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D1_9BACT  E=9e-36 s/c=0.66 id=31% cov=90%
--------PKDPPrFTVIDETADWLVVDKPPFMEAHPSKPNGRPTLwdglrgLLAYEIVNGGQVSIINRLDRETSGLTLVAKHRAAARELHLQMQGRRVEKEYLALVWGWPERETFTIDAPILRQGECMPSPIHlkqaVHPDGAAARTRFQVECTFtletsnGNRFALVRAFPETGRTHQIRVHLAHAGHPVVGDKIYGPDEQcylefirtgwtpelgsRLLLPRHALHSTVLRLPD---------------
>UniRef50_B0S0X9(80-306:321) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S0X9_FINM2   E=1e-35 s/c=0.67 id=28% cov=94%
---------DDFNLDIIYEDDDLILINKKTGVLSHAANPQDYGKNIVDMMVSYLIKtnqfkptqnstftPALVNRLDRNTSGIVVGAKTYDSLKYFNDLFKKHEITKIYETIVVGNLKDQ--TIDLALEKDNDKNKS--VINSSGKKSMTKVWNVKNFGK-YSLVNVDLLTGRTHQIRAHLSHINHPIIGDIKYGNREVNKYFKNkydlnfQLLHSYKLVFPEKMGKyqkyESMVFESKRD-
>UniRef50_Q8EX37(80-278:301) Pseudouridine synthase n=1 Tax=Mycoplasma penetrans RepID=Q8EX37_MYCPE  E=2e-35 s/c=0.76 id=29% cov=87%
----------KPILNVIYEDKNIIVVNKPRGLICQPDKNEKI-DTLNNRIKKYlyekkdknYLEANLCHRLDKYTTGLCVAAKNQKTLTELNNLWNTEAVSKYYLCLCYGKFKKKSDTLKDFIFLNEEKQIMEIdRENKFNKEIITKYRVIEQKKD-MALLEIQLLTGKKHQIRVHMASIGHPVLGDTKY-NKKGNFGFQFPCLTSYKIKFN----------------
>UniRef50_C3YH76(83-263:369) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YH76_BRAFL  E=2e-35 s/c=0.83 id=34% cov=79%
-------PPVVAdPVQIVEETDDLVVINKPASMPVHPCGGYRHNSVIFVLGKEHGFQNlHPIHRLDRLTSGILIFAKNLETKHRLDAQIKGREVKKVYLARVEGEFPE-KAECDKPIFAVKHKLGVCRVCPE-GKPAKTTFERVSFDGKS-SVVRCFPETGRMHQIRVHLQYLGHPIVNDPLY--------------------------------------
>UniRef50_C8WX68(69-279:333) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX68_ALIAD  E=3e-35 s/c=0.71 id=32% cov=88%
----------NIPLEICYEDDDVIVVNKPAGMLTHPSPHERRGSLLAAaahYLRDRGGVPHAVHRLDKYTSGAVLIAKHAHAHHQLDRALRQGLVDRRYVAIVYAPEGCETGRWLTFvdgLAPNPHRPSRRIVVPPDrGDRAVTHALPLVQAG-PLALVALVLETGRTHQIRAQMAFHGMPLVGDRDYTYALANRRDPlgqasfyekafgRQALHAYALSWP----------------
>UniRef50_C1E6N6(127-355:363) Pseudouridine synthase n=2 Tax=Micromonas RepID=C1E6N6_9CHLO   E=4e-35 s/c=0.66 id=35% cov=94%
----------ERDFHLVHEDADYAVVNKpwcvrldtPRGWPgkVRFTPKYPGDLSVEDWLERRYPDWdtvRFCHQLDNATSGVLVAASNKRAAGAAAKLFRERRARKTYLAIVFGHPEQDEWTVDVPMGRDPDDPKgfRERVDPEHGKACETRFRVLKRgrlnlrgkfEGVPVSKVEVTPVTGRRHQIRLHLQFSGHPIVGDNAYS---QDTDSFRTFLHAHKLTLPFDEPRGTMQFVAPEP-
>UniRef50_C1N7S8(32-268:360) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7S8_9CHLO  E=7e-35 s/c=0.63 id=31% cov=94%
--------PDPAPLTVLYEDEHVLAVDKPPGVMTYPAHRLRGGSVVNRAVHHLRGVTRdgsgggagfgfgaatepiAVHRLDLETSGVLMLAKDKPSASALQGAFERREARKTYLAVCAILEDAANASDESDDDFDFERHPGHRRRErrrravhtrgDAGREAREHRFTGKRIV-GTALVLARPLTGRTHQVRLHLAHAGLPIVGDALYGYDDALRPASggfegRMALHAWNLAVKHPRTKNTMRL------
>UniRef50_D1SY25(110-317:328) Pseudouridine synthase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SY25_9BURK  E=8e-35 s/c=0.72 id=31% cov=90%
---------------VLYQDEHLVVADKPHFLPVVPT-GRYLQHTLLVRLKRRLGLDGlsPVHRIDRDTAGLVLFSVQRATRGRYQALFRDRAVDKTYEAVAPWRVDVAFPRERSSRIEESPQFFRMHEV-PGEANSLTRMEVLDVDG-AWARYRLSPVTGRRHQLRVHMAALGLPLRGDAFYpevNDPPEGDFSRPLQLLARAIAFTDPVTGRERRFES----
>UniRef50_A3U5W9(76-273:283) Pseudouridine synthase n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5W9_9FLAO  E=8e-35 s/c=0.75 id=32% cov=86%
-------------LDVLFEDDYVAVINKPAGYPTSGNFFKTIAKALPYNLKISTKNDAllipqPIHRLDNPTSGVLVVAKTKSSQINLNKQLELKGIQKTYIAVVHNTPDSNMLFNDNI----------------DGKESESKLEIIKTFKvkdDIYSLVELFPKTGRTHQLRIHTSKAGYPIVGDQLYGISSEKN--KKLLLHAKSIQFKHPVTGNEVFTTSELP-
>UniRef50_B8I5R6(76-290:303) Pseudouridine synthase n=2 Tax=Clostridium RepID=B8I5R6_CLOCE   E=2e-34 s/c=0.69 id=26% cov=94%
-------------FSVVYDDDNLLIVNKETGIPVHPDKNQKEATLIDKLQSIYGPNLALCHRLDRNTSGLVIIAKNPATLEVMLEKIKNREIQKYYTCIVSGKMEKKNAELVDYLEKNEKLS-RVFINPEKTRNSvqiITRYRILASM-NSLNLLEVELVTGRTHQIRAHLAYYGHPIIGDGKYGKNAENKqyNAKYQLLCASRLTFnfqssaRHLNYLNKKTVSIDPPF
>UniRef50_Q31G00(6-210:238) Pseudouridine synthase n=6 Tax=Gammaproteobacteria RepID=Q31G00_THICR  E=2e-34 s/c=0.72 id=29% cov=92%
------------PITVVFQSTEFIVVDKPAGMNFHsePDSDGQKQPGLVVFVQQQLGveELYPVHRLDKMTSGLVIFALSKASAKAFQQLFESRQIQKFYLAISTHKPKKKQGWVKGDMMPARRGSWKLSKTLEN--PAITQF-ISQNTRPGERWFLLNPHTGKTHQLRVALKSLGAPIAGDARYALSAEAEHEDRGYLHAFALRFT--LHDESYEFCVPP--
>UniRef50_Q5GT77(89-375:389) Pseudouridine synthase n=8 Tax=Wolbachia RepID=Q5GT77_WOLTR   E=7e-34 s/c=0.51 id=33% cov=93%
---------------ILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNsPQDATTRFSIIAKFKLNkplvqrpiiqvadtqlyehcnlslsrvchlsslsscyssallchlsapilvssktdhkqahyttfsikkldssimcrndtrsVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAfvDGIASKIHLHSYSLSLKLP-NNKKITITAPLP-
>UniRef50_A1SV26(74-289:303) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=A1SV26_PSYIN  E=8e-34 s/c=0.67 id=28% cov=92%
--------------TILFQDEHILVAHKPHFLAVTPG-GKYVNECLQNRLRRSTGIEALqtLHRLDRVTAGLVMFSVNPDTRHRYHQLFKTRQIHKSYQAIASISDAENLTGQEWEIKnRIVQGEPRFRMRVTEGEANSHSVIRCLRQSAQTALFELTPVTGKTHQLRVHMQALGLPILNDKYYPQLEplsADNYAAPLQLLAKELQFIDPVTEKPRCFRS----
>UniRef50_A8RUB2(119-345:366) Pseudouridine synthase n=3 Tax=Clostridiales RepID=A8RUB2_9CLOT   E=8e-34 s/c=0.64 id=30% cov=85%
-------------LDIVYEDQHILVVNKPSGMLSQKAKDSDMSLNeyILNYLidsgklpisQLRTFKPSICNRLDRNTSGLVVAGKSLAGLQVMNEVFKDRSIHKYYQCLVAGEIKEKQLIA-GFLKKDESTNTVSIFPLEVEDSVPIMTEYLPLSGNKTfTLLQVTLITGRSHQIRAHLASIGHPIVGDYKYGSRSLNDAVKKkyavrsQLLHSWRL-------------------
>UniRef50_B1ZUV5(43-260:279) Pseudouridine synthase n=2 Tax=Opitutaceae RepID=B1ZUV5_OPITP   E=1e-33 s/c=0.67 id=30% cov=91%
---------------IVHEDERLLVVAKPGDVVCHPSKAGPWSSLVgAVREFTGLATVHLVFRLDRETSGIVVLAKDPKTASRLQVAMQERKIGKAYVAILTGAMRE-PVTVDQPLGDDVASPVFVKsAVRADGQRSVTHFSPITVAADDaFSLVRVVTETGRKHQIRAHAQWLGHSLVGDKIYGPDarcyldfidtgwtpalADKLLLPRQALHCAEIDLT--RTGLAHVFRAP---
>UniRef50_B7AN06(42-275:297) Pseudouridine synthase n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN06_9BACE  E=2e-33 s/c=0.62 id=31% cov=94%
--------PDKIKLKVMYEDEDIVIIDKPSGMLSQKASAGD--KSLVEYVTEYLldtgsltqkdlitFRPGICNRLDRNTSGLVVAGKTIKGLQEMSEAFRDRTLHKYYICVVAGRINERS-RVSGYLVRDEKTNKS--TIYADYKEAMDNAEADMinnieteyipaVSNDNFTLLKVKLITGRTHQIRAHLASLGHPIAGDVKYGSRQINKrmsdqyHIKSQMLHAYEL--DYPQRGLCVRTDIPKEF
>UniRef50_B0N6U2(86-317:328) Pseudouridine synthase n=5 Tax=Bacteria RepID=B0N6U2_9FIRM   E=2e-33 s/c=0.62 id=29% cov=87%
-------------FSVLYEDKHVLIVFKPAGLLVHEDANESINTLTnqvlsylaskneLDLSRENTFMPGPVHRLDRNTSGIVIFGKTLAALQNLNEMIKQRHcIEKKYLTICRGQLNHQRNLHGYMIKLENQAQVKlVKKDYPGALTMETIVRPLKYNCD-YSLVEVTLITGRMHQIRVHLSSIEHPIIGDRKYGDFELNKYIKKtfglnnQLLHAYKIKFV----------------
>UniRef50_C4R1Q9(93-273:358) Mitochondrial tRNA pseudouridine synthase involved in pseudouridylation of mitochondrial tRNAs n=1 Tax=Pichia pastoris GS115 RepID=C4R1Q9_PICPG  E=2e-33 s/c=0.80 id=32% cov=77%
--------------EIVYQDDNILVVNKPCGVPVHPtGKYYYNTMTEIMKNELGVSSLYPCHRLDRLTSGILIIGKTPRAAAKYQTQLKQNSIQKTYIARVDGEFPMGNIVCSDKIVNIDCKRGKENGITE-PKEALTNFQRLAYSTSlNQSIVKCSPKTGRTHQIRIHLRNLGHPIANDPLYG-------------------------------------
>UniRef50_A8SLC1(85-307:318) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLC1_9FIRM  E=2e-33 s/c=0.65 id=31% cov=92%
-------------LDIIYEDENIIVMNKPKNLLSHASSKEDYGNNLVDFMIGYLLEKGdynpraektfvpaIINRLDRNTSGLVIGAKNSKALRELNR-LKENSIEKYYKTIVSGKVKKNFVINEK-LEKDEEKNKS--TISKNGKDSITEIYV-EKNNDEFSLLKIKLITGRTHQIRSHLSSKGFYIIGDIKYGNAKVNKFfrdnfnLRSQFLHAETIIFKNIVGDlsylNNKEFFAPMD-
>UniRef50_D1N1K3(81-313:321) Pseudouridine synthase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1K3_9BACT  E=3e-33 s/c=0.61 id=27% cov=92%
---------------IAYEDDALLVVDKPGNLCVHPS-GPFFKHTLWHLLSSKYGKIHLVNRLDRETSGLLVAAKNPKAAAKLGKP--GWPMRKEYLALVFGNFADRIEAYGflvpdlASVVRKKRRFVAGERPPEGAVRPESARTVLlpARSGERYSLVRALPETGRLHQIRATLFSLGFPLLGDKLYGPDDgiflkirsnaitaadrERLILLRQALHSAKLAFRHPDTGETVAVESPLP-
>UniRef50_D0RNQ1(95-280:288) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNQ1_9RICK  E=3e-33 s/c=0.77 id=25% cov=85%
----------------VFECEDYCVLNKPYGYASQ--DGSKVKLSVIDILNSTKKNYYIVHRLDKDTSGLMLLAKNRFYAKKFSEMFKSREVKKKYLVIINGKIKKNKGEIHSKEKVNGKEI-----------ESKLYFEVIS-KKNNFSYLEIDLITGRKHQIRKQFSDIGHPVVGDLKYGDKKNNTQ---LCLLSYEIEFEYNNKIKKYKATIPDNF
>UniRef50_Q8IZ73(210-400:545) RNA pseudouridylate synthase domain-containing protein 2 n=20 Tax=Euteleostomi RepID=RUSD2_HUMAN  E=4e-33 s/c=0.75 id=33% cov=79%
-------PPVTAePIRLLAENEDVVVVDKPSSIPVHPcGRFRHNTVIFILGKEHQLKELHPLHRLDRLTSGVLMFAKTAAVSERIHEQVRDRQLEKEYVCRVEGEFPTEEVTCKEPILVVSYKVGVCRVD-PRGKPCETVFQRLSYNGQS-SVVRCRPLTGRTHQIRVHLQFLGHPILNDPIY--------------------------------------
>UniRef50_C6CYJ1(6-218:242) Pseudouridine synthase n=11 Tax=Firmicutes RepID=C6CYJ1_PAESJ   E=5e-33 s/c=0.67 id=27% cov=93%
---------DAIQIPVLYEDNHIIAVVKLPGIPSQ--EDETGDPDMLTLIKQDLKIRHnkpgnvflgLIHRLDRPVGGAMLFAKTSKAASRLSEAVRSRTFGKTYVCVVHGKPAKQQDRLRHYIRKDAKRNQVTVYKEPaaDAKEAILEYRVCAQAG-GYSLIAVKLHTGRPHQIRAQMAYIGCPLVADRKYGAPNTASVTD-IALWSTSVEAPHPVTKELQCFRS----
>UniRef50_C7ZA60(178-394:525) Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZA60_NECH7  E=1e-32 s/c=0.65 id=33% cov=81%
-------PPVtEDPLQVIHEDEDMIVINKPAGVPVHPA-GRYNYNSVIEIMKSERGQgflPYLCNRLDRLTSGIMFIAKNPPAAEALGIKIKQRTVRKEYIARVMGKFPDGEVVCDQPILQISPKLGLNRV-RANGKTARTVFKRLAYYPPpdgeetegdgrpktpeeeldekhhpwinkrGYSIVRCLPVTGRTHQLRVHLQHLGHPIQNDPIYANRR----------------------------------
>UniRef50_A6DMG7(10-219:246) tRNA pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG7_9BACT  E=1e-32 s/c=0.67 id=26% cov=93%
----------------LYEDEYLVVAKKLAKISVHRSEMCRDRRTLLTMVRNKLGGQYVyaVHRLDRPVSGPLLFAKSPEMCRELQKQFNEKTVEKKYIALVRGWLEGKGKVDKQLLKKSNGTIQDCLTRYRGLATAEIDEPLGKFPTVRYGLVELEPVTGRYHQLRRHMRDLAYPIIGDSTDGDSHQNRFfrekfeLRRLMLHCFYLSFKHPVSQELIKIYLEPD-
>UniRef50_A9GEI0(8-207:241) Pseudouridine synthase n=2 Tax=Myxococcales RepID=A9GEI0_SORC5   E=2e-32 s/c=0.70 id=37% cov=89%
-------------LSLLHLDDRVAAFAKPSGLLVHRGWGDAPVVFVDLAERALGRKVYPVHRLDRATSGVLLVALDPAAAALLCAQFEQGLARKRYLALVRGVPPE-HGCVDHPIPRREGGPRV---------PAVTDFERL-HALERYAVVEARPRTGRLHQVRRHLKHISHPIIGDVNYGKGEHNRLfreryaLHRLALHAAELAVAHPETGAPLRVAAPLP-
>UniRef50_C8NY78(102-321:339) Pseudouridine synthase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NY78_9CORY  E=2e-32 s/c=0.64 id=32% cov=93%
--------------TVVYEDDAIMVVNKPPFLATMPrASHITESATVRLRRSTGNEELTPAHRLDRMTSGLLLFTKKASVRGAYQQLFASRAVAKLYEAVADDigpslpaRPSANSPLVWEHHIVKREGELASSITVDAIPNSLTYVTDITPLQGGAARYLLQPVTGRTHQLRVQMHAAGAPIHGDPVYPellPASAEDFTNPMLLTAVGLAFTDPLTGVKRTFSAP---
>UniRef50_B3T0Q8(94-303:320) Putative RNA pseudouridylate synthase n=2 Tax=prokaryotic environmental samples RepID=B3T0Q8_9ZZZZ  E=1e-31 s/c=0.66 id=32% cov=93%
---------------VIFENDSFLLVNKPSGLAVHGGSGIHLGLIELLRsfREKRNEHLELVHRLDKDTSGCLLVSKKKSKLRKLHEYFREGKVKKTYLGLMVGKFTQTVYEIDQPLkIITTPENGRLAVPDDSGKKAKTKFFLMEKY-KNSALFKIEPITGKTHQIRAHAKYMKTPLAADNRYGIQPdqivSEFGLTRLFLHAESITFPgLSSTENTFSFKSKLD-
>UniRef50_A0RRU2(64-315:319) Pseudouridine synthase n=2 Tax=Campylobacter fetus RepID=A0RRU2_CAMFF  E=1e-31 s/c=0.55 id=31% cov=94%
-------------LKPIFECDEFGVFDKPSGVLSHPNGRNCEYSLCDEIWSLWGKKACVAHRLDRETSGVIVVAKNANSALNLKKSFENRAVAKTYLAFVRGKFDgngldkfhindfedfkdkleffdniqGFVIDKNMDITKDYDDIKIRMEICPEGKRAVTVVKLVEYYPKfDISLVECYPLTGRQHQIRLHLFHMKHRILGDPIYGldkfnveqildgvmserDRVKNTGASRLMLHAKSVKFK--FKDQVFEIRSEQDF
>UniRef50_UPI000185C0B7(97-322:342) 23S RNA-specific pseudouridylate synthase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C0B7  E=1e-31 s/c=0.61 id=33% cov=93%
------------PMPIVFQDDNLVVVDKPSFLATMP-RGRHITETAVVRLRRELGNPELVpaHRLDRLTSGLLIFTARREVRGAYQGLFASGEVTKRYHALTSPTPiagGASEALPETPLELRTRQHKiagqMQAYTLEGEPNAHTIIEHISLvdvpsdadglaaDSGRVALWQLKPITGRTHQLRLHLSELGFPILGDQYYPeilPLEAENTSEPLHLVCVEMSFADPVTGEQRTFHS----
>UniRef50_Q96CM3(99-346:377) RNA pseudouridylate synthase domain-containing protein 4 n=19 Tax=Amniota RepID=RUSD4_HUMAN  E=2e-31 s/c=0.56 id=35% cov=86%
---------------ILHQDKNLVVINKPYGLPVHGGPGVQLCITdVLPILAKMLHGHkaeplHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPMPSAGVVDIPIVEkeaqgqqqHHKMTLSPSYRMDDGKmvkvrrsrnaqVAVTQYQVLS-STLSSALVELQPITGIKHQLRVHLSfGLDCPILGDHKYsdwnrlapqklsvgtlkklGLEQSKARYIPLHLHARQLILP----------------
>UniRef50_C4FZD3(111-339:353) Pseudouridine synthase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZD3_ABIDE  E=2e-31 s/c=0.60 id=28% cov=87%
----EFDEP-----KVIYEDRDIIIVNKPVNVLSQIAKTGD--VSMNEWLISYLInsgsltaedmltvKPAVVNRLDRNTSGIILAGKTLTGLRFLSDIIKTRKLTKYYLTIVKGEI-PNNFTAEAYLLKNDNHNtvKIYKDKVEGAEYIKTAYEVLQV-KDGHSLLKVELITGKSHQIRAHLSFLGYPVIGDGKYGLKSENTNYRRmglntQFLHSYEIKFP----------------
>UniRef50_C4GB89(84-302:337) Pseudouridine synthase n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB89_9FIRM  E=3e-31 s/c=0.63 id=28% cov=87%
------------HVHVIYEDEDILALDKPAGCLSQRAGQKDISLNeemlayliakgALTRESYFLFHPSVANRLDRNTSGLILAGKTLRGQQYLSEQLRDRSVIKLYHTIVRGRLTEELQL-DGYLYKDVGRNQvlvseKKEDLPEGAQEIHTAYRPLDHRKD-LTLLEVHLMTGRSHQIRAHLASIGHPIAGDPKYGDFHWNQILRRkygvrgQLLHSYSIKLPD---------------
>UniRef50_D1BPK0(124-372:372) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BPK0_VEIPT   E=3e-31 s/c=0.55 id=27% cov=93%
--------PIEMDLSVLYEDEDLFIVDKPSGVTVNSKDRLSLANGVAHYFKEHGikRKVRFLNRLDRDTTGCIVIAKSGLAQSLYQQQMDDNTFEKWYMATVEGIVEADEDTLVFPMERSAD--GIHYEVNAKGKETRTDFSVLCRhssqpvdnsvnksensvdiglknvdielvdvdknnlnvdktvyksNKCGYTEVLVRLYTGKTHQIRVAFSHIGHPLVGDTLYG---AQPTGQPFQLRAQKVVFTHIRTGEHITVMA----
>UniRef50_C0QI10(68-289:298) Pseudouridine synthase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI10_DESAH  E=5e-31 s/c=0.61 id=26% cov=92%
--------------EILFHNDHLIAACKPHFLPVVPS-GPHVNETLLNRLKIRFsnPDIVPIHRLDRETAGVVLFSVEPETRGAFQHLFMEKKVKKTYEAVTRRPGTLPHLPSVIVNRIERGEPWFRNTIVPGRPNAETRLELVGADRDR-AFFRLYPQTGKKHQLRLHLASLGFPIENDRCYPDllpKQGDDWEHPLMLLSREVRFMDPIAGRERVFTSP---
>UniRef50_B7FU02(1-240:240) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU02_PHATR  E=8e-31 s/c=0.56 id=41% cov=94%
-------------LHILYCDEHICVVNKPSGILSVPGP--RRNPSIANLVYEILNppidiDQMVVHRIDMDTSGVLVFALTELALRQLHDDFRSRRVKKTYEALLAGHFRKaTQVEIDVALERDPYHPPFMRRYWEPQRSATYSRQFSQIYQPsaqahlPVSRVHMSPHTGRTHQLRVHAAALGYPIIGDDIYGFEGEGDcgvnstildqlIPNRMslhqqlqelqlplCLHAKQLCIFHPFSGAPMIFECEAPF
>UniRef50_Q6A5E7(71-287:295) Pseudouridine synthase n=4 Tax=Actinomycetales RepID=Q6A5E7_PROAC   E=1e-30 s/c=0.62 id=30% cov=91%
---------------ILYSDERILVVDKPHFLSSIP-RGRHVLESVVVRLRTQlgLPELTVAHRLDRVTAGVLLLTRERKWRRPYQEIFERREVVKKYrLVAPVVHDPAGEGVTatksgWQVRSRIIKERGILQAREVPGVPNAVTDIALIGEHGGWGLYEASPRTGRTHQIRLHMQRLGAPIVNDPFYPvvlDTPVDDFTHPLQLQAWRMGFTDPVTGDPRAFTS----
>UniRef50_B5JG19(12-236:262) RNA pseudouridine synthase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG19_9BACT  E=2e-30 s/c=0.60 id=31% cov=94%
--------PEELETWILQNDDHVLLINKPALLVCHPSKNGPWS-SLAGACREYLQseRSHLVSRLDRETSGIVLFAKHRLKSRHLQMALEQRKVSKTYLAILEGELKEETLV-DAPLGPDTQSivHSKNTVRRDGRKqEAQTKYTPLHSNG-RYTLAKVDPITGRKHQIRAHALHIGHHIVGDKLYGPDEGLFLdfiedgwteqmakilpINRHALHAYRMVF-DLETG-PETYIAPL--
>UniRef50_UPI0001BC98D7(106-318:324) RNA pseudouridine synthase family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC98D7  E=3e-30 s/c=0.63 id=28% cov=94%
--------PNETPIPvletILYADEHLVVADKPHFLPVTPAGEYVEQTLLRRLIHRlGNPDLVPLHRIDRHTAGLVLFSANRQTRSAYQALFPTRQIDKFYEAIAPALPGLEFPRLHESRLVEGEPFFRMQ-EGAGASNTRTQIEVLER-QDQLWRYGLYPVTGKKHQLRVHMAALGAGICNDPFYPDvvkNPVDDYQNPLKLLAKGLRFIDPLNGKQRQFES----
>UniRef50_D0LDE5(88-291:317) Pseudouridine synthase n=18 Tax=Actinomycetales RepID=D0LDE5_GORB4   E=3e-30 s/c=0.66 id=29% cov=89%
--------PIPFELPILYADENIVVVDKPHFLATMP-RGRHVTETALVRLRRQLGsdDVAPAHRLDRLTAGVLLFTLRREVRAAYQDLFATRAATKEYRALAPVDDALTTTVTIRNRIEKTAGDLRARVV-DGPVNAISDITLLSDAG----LYRLVPHTGRTHQLRLHMASLRVPIVDDPLYPDvrpelaqrPDVGDFSAPLRLVAHALEFTDPFTG-----------
>UniRef50_D0BPC6(89-284:304) Pseudouridine synthase n=7 Tax=Fusobacterium RepID=D0BPC6_9FUSO   E=7e-30 s/c=0.67 id=24% cov=90%
--------------MIVFENDNLFVINKPLGDVVHKGSGHDISLLEEFRSYYSNNNINFVNRIDKLTSGLVIGAKNIKTAREVAKEIQAGNIVKKYYILVNGKIEKDNFILENYLKKDEERVIVSDIEKEGYKKSITYFKKIKEY-DKYTLLEAELKTGRTHQLRAQLNHLGNNIVGDIKYGKNEKEDI---MYLFSYYLKID--LYNLEIKLEIP---
>UniRef50_A6VWM4(2-207:223) Pseudouridine synthase n=2 Tax=Marinomonas RepID=A6VWM4_MARMS   E=8e-30 s/c=0.64 id=30% cov=89%
-------------LQILFRSVDYWIVEKPAGMSFHAESEGLGVMQTLA-ISYPDQNFYPVHRLDKMTSGLLIVACHAAAAAEFGKMFERHEMEKRYLALSAKKPKKKQGTISGGMA--PSRRGQWKLTQDNENFAVTQFF--SSAFHGLRVFIVRPLTGKTHQIRVALKSLGSPILGDLRYSGE----GADRGYLHAYSLQFNWrgemksylslPISGE--HFSSELsDF
>UniRef50_B0EHA4(134-308:389) Ribosomal pseudouridine synthase, putative n=2 Tax=Entamoeba RepID=B0EHA4_ENTDI  E=1e-29 s/c=0.75 id=31% cov=79%
--------PVPCLLPIIHEDNDVIVVNKPSGIPTHSGGRYTENTVINILEKERNIKLFGVHRLDRLTSGVLIIAKSSEIANEIQRHFIS--AHKKYICRVIGYMGSC--IVNKPIIETTCITKQRVTVGSEGKISTTIFEQIQYDQKtDTTLLWAIPKTGRMHQIRVHLSYENHPIANDSMYRNK-----------------------------------
>UniRef50_A8EQU7(71-280:300) Pseudouridine synthase n=2 Tax=Proteobacteria RepID=A8EQU7_ARCB4   E=1e-29 s/c=0.62 id=31% cov=87%
-------------LKPLLEFEDFAIFDKPTNLMVHPISKNTSYSLLDEIRYHFGENANLIHRIDAETSGLVIVGKNKKSEIELKDMFQEKKYHKSYLAIVQGEIKEELKINKALDREGKAIGVRMKVCTqeEGGKESITIIKPIIYDKEkNLTLVEALPLTGRQHQIRVHLHSMGHTILGDPIYGVDDENAenylnktlseedrfkvtKSYRLWLHANYLEFN----------------
>UniRef50_A1V9V4(125-320:390) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1V9V4_DESVV  E=2e-29 s/c=0.67 id=31% cov=87%
--------PARPLPPVVAETPDLFIFDKPAGLAVHPGTG--HTDSLTTRLAQHFakapFMPTPAHRLDRDTSGLLLVARSYAMLRTLHEAFASHDaLVKEYLAWVAGCWQPaAPVTLHDRLSKGAEASGFERVASDDeGAEAACTVRCLLREQHR-SLLLVTLHTGRTHQIRVQLSRRGHPLLGDRKYGGPPRMGGF---LLHAVRLCLP----------------
>UniRef50_B3Q780(16-292:322) Pseudouridine synthase n=8 Tax=Bradyrhizobiaceae RepID=B3Q780_RHOPT   E=2e-29 s/c=0.47 id=34% cov=89%
--------PDEIQARVLYRDGLMLVIDKPPGLPVHRGpKGGPNLEASFDALRYGLPRPPvLAHRLDRDTSGCLVLGRHRKATATLGLLFKHSRISKTYWAIVEGGPTEDQGSIDLPIAKLNAERGWWQKVDPEGLPSLTKWRVMGRSGvlpaaatttsatsapirdattsgspppcgegsgvgvhsgsltsgrphpnplpragegvrpargeadnlsrkpgailgapppTQLTWLALEPITGRTHQLRVHCAAMGWPILGDNIYGNG-PRFGEPRLHLHAREIVIP----------------
>UniRef50_Q6MN39(2-205:225) Putative pseudouridine synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MN39_BDEBA  E=3e-29 s/c=0.64 id=29% cov=86%
-------------IQIVFENTHFIICDKPAGVLSTPSRFEEDDARLClgtALQKEKGFQIFPVNRLDFEVSGLVVYAKTAEAHRKANAWFEHKTVKKTYRALTtgqsYAHIPANVPNEKLKLTPEVGNTFEWRCRLLRGKRRAYESPqgkecltvaVFRGMQGDYQVWDLNPVTGRSHQLRFDLSRHGFPIVGDKLYGS-TVELADNRIALRSYRIDF-----------------
>UniRef50_Q6F9V8(95-298:304) Pseudouridine synthase n=17 Tax=Acinetobacter RepID=Q6F9V8_ACIAD   E=4e-29 s/c=0.64 id=24% cov=91%
--------------SILFENHDLLVVDKPHFLTISPT-GKYVQETLLVRLKQQTGNEdlTPIHRLDRETAGVVLFCKRPESRGIYQTLFAKREVHKIYHAIAAYNPLITFPQTLRLCLEKGNPFYTMQVNPNGQVNSETRIECLAHNQQ-WAKYRLSPSTGKQHQLRLHLSFLNIPIKNDPFYPvveHKADDDFSAPLQLLAKELSFFDPITQSPLNFKS----
>UniRef50_A7ZGA9(69-276:307) Pseudouridine synthase n=4 Tax=Campylobacter RepID=A7ZGA9_CAMC1   E=6e-29 s/c=0.62 id=34% cov=86%
-------------LKPIFECESFAVFDKPSGVLSHPN-GRHCEYSLNDEIYTLFGRDASVaHRLDCETSGVIVVGKDRNSTIKLKKIFENREVFKSYVAMVQGKIErEFTIDAKMDLANNYDDVKMRMQICENGKSAVTKILPIKYFDDiDTTLVRAIPLTGRQHQIRLHLFHVKHKILGEPLYGLSRPQiekildkemsererinlTDAKRLLLHSDEISF-----------------
>UniRef50_Q9ZMA1(61-284:293) Uncharacterized RNA pseudouridine synthase jhp_0321 n=14 Tax=Helicobacter RepID=Y347_HELPJ  E=7e-29 s/c=0.58 id=26% cov=96%
-----YFKPNEKQEKLVFEAKDFGVFDKPAQIYTHP-KGYFYHESLLDCIQSHFGKNaHPAHRLDYETSGLVLAGKTLQSTKDLKALFMQKKVKKTYLALAHGLVDKSIIINKPILTPqnIQKDLRIRSQISPLGKPSITLVEPLSYNPFlDISLLKITPLTGRTHQIRLHLSSVDHRIVGEGLYGVADENAreylqlkrenNAPTLMLHAASLEFE--FKGAHYKIASPMP-
>UniRef50_Q31EX3(95-291:300) Pseudouridine synthase Rlu family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EX3_THICR  E=1e-28 s/c=0.65 id=34% cov=84%
--------------PVLIEDaDDFSVWYKPKGVLSQGSKWGDH-TTLNRWIETHYlfkeppekRPCWIVHRLDKATDGLILIAHNKKSAQMLARRFEAHQIGKSYQAWVKGKFGETERVFDQDV---------------NGKTALSKAHQLVYNSDNdCSLVQVTIATGRKHQIRIHLSKAGFPIIGDRLYGDAQEGD--PDLQLTAVEITFLSPQGTIEQRFQLP---
>UniRef50_UPI00006CD8DD(92-281:446) pseudouridine synthase, RluD subfamily protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CD8DD  E=2e-28 s/c=0.67 id=27% cov=80%
------VEPPIINLlpKVIFEDDKLLVLSKPPYISVH-ASGGFHFNSLVGLLKFEMGYNielYVLHRLDKLTSGVLIMAKDRDLTKKFHES-ETELIKKTYLARVHGNFNHQYLEYEKPIYCIYKKVGTYAVLDttdeeeiksKGAKQSKTIFKKIWYDEKsDSSLLECQPITGRTHQIRVHLSSLGFPIINDTQYGG------------------------------------
>UniRef50_C8PQZ0(7-226:276) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQZ0_9SPIO  E=3e-28 s/c=0.58 id=27% cov=88%
---------------IYFEDDYCAVVYKLNG---------ENAQTFFTPLFPHKPFIAPINRLDTPVSGIILLAFSAQAQTLLSQAFKTGSVEKEYWAICERTaadtteEEPGIHRLEHWLGFHTKTQKAFVGAAPiditltnttaagitkpkkhkkPALKKAVLYWTLCGKGDRYDFIRISPETGRTHQIRVQMAAAGHPIKGDLKYGARRSETG-GGIRLHSYKLSFSHPVTHQDITVQAPP--
>UniRef50_A1R0P0(106-297:331) Pseudouridine synthase n=20 Tax=Borrelia RepID=A1R0P0_BORT9   E=4e-28 s/c=0.66 id=23% cov=84%
---------------IVYEDADLLVINKRRGILVH-GDKYSLDTLINAYLLDEslgslSFKPSAVHRLDRNTSGLIIFAKNINSARILSQAFSSGVVIKKYLALLDGVITK-PLTYKNFLYRDKIARKTFVINDIDKCNAVTDIKPILV-SKSSTLAEVSIKTGFTHQIRAQCAFNKHALINDKKYDSQFVKTNY---FLHSFLIKFN----------------
>UniRef50_B8J0V1(122-306:360) Pseudouridine synthase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J0V1_DESDA  E=5e-28 s/c=0.68 id=33% cov=81%
---------------------YLWAFDKPAGLPVHPGTG--HEDSLTTRLSCHFagvsFMPTPVHRLDRGTSGIILVAASYAALDETQRALRANAMHKEYVAWVAGRWPHTQTCLVRHFLRKEAVDGFERVrpvkaDAPDAKEALCLVRALS-IADRASLVQVRLLTGRTHQIRVQLSSLGHPVLGDTKYGQTRAGVA---LYLHSLRVILP----------------
>UniRef50_C5K6J4(111-345:393) Ribosomal pseudouridine synthase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6J4_9ALVE  E=6e-28 s/c=0.54 id=28% cov=82%
----NENPvPFDGELKIVGETDDVVAVDKPSGMPVHSGGGHR-VNCLSAILKEQDPSRfslaiHTLHRLDRLTSGIVILGKNPDVARAFSEAFKKHdqEIQKCYLARVKGKFEGSNVVVEGFMRCVDFRVGKFILVksnkgtasedanqgdaptstpsgddksaveeehIEDKWSQTSFDKVWYDEQNDETIIKCYPKTGRTHQIRVHLESIGHPIANDSCYGG------------------------------------
>UniRef50_A4S075(99-317:334) Predicted protein n=2 Tax=Ostreococcus RepID=A4S075_OSTLU   E=9e-28 s/c=0.57 id=33% cov=86%
--------------MVVLRDSDgIAAVVKPAGVLTHPVEGGGSELTLMDAALSRFdgqlsdlnglDKRGIVSRLDKPTSGVVLLAKNNASHAELLTQFYQRCVVKQYCALLDGTL-PASGSESTPL---------------DGRSATSEYEVMETFigpSWSYSLVRVEPKSGRKHQIRRHMALLGAPLVGDPLYRTARTKQINPNppecvlkalsvgkpgtiFWLHASAVEYSGMPNGERIVVSAPLP-
>UniRef50_C8RSX9(65-311:313) Pseudouridylate synthase n=2 Tax=Corynebacterium jeikeium RepID=C8RSX9_CORJE  E=1e-27 s/c=0.51 id=26% cov=95%
--------PVPGEIAVLHQDADIVVVDKPPFLATLPRGQHITETALVkARVQLGIPELSPSHRLDRLTRGVLLMTARPEIRGAYQTMFERRIPHKVYEALTPLPEEAPFapiapladWRSWDPPTPERPWRLEHSMSKTRGHLSTiltdgspnaltlvTGLRTEWREGRKILVWRLEPHTGKTHQLRVVLRSLGLPILNDPLYTEltdaalfsidaptprpvyVEDEDFSSPMGLIAKELRFPDPLSGQERKFVS----
>UniRef50_A8SPE4(90-307:334) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A8SPE4_9FIRM   E=1e-27 s/c=0.57 id=27% cov=88%
--------------EIIYHDHNVLIVNKPVGVLSQKASKDDYsiNESVLDYLLDNGyitseqlrtYKPSICNRLDRNTSGLVLCGVSLMGNQELSRIIRERNIDKYYYTIVKGHIKSVQDVT-AYLVKDEKKNtvivrdGVDEIKQDSGKNEFEKIHTIFepvRSNGKYTEVKVKLITGKTHQIRAQLSHMGYPIVGDQKYGDRETNIYFRQtyklrnQLLHCGEVKFTN-VTG-----------
>UniRef50_C0N835(60-274:279) RNA pseudouridine synthase family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N835_9GAMM  E=1e-27 s/c=0.58 id=30% cov=85%
----------------IYYDEHVLdcepaepeliadmgqysIWNKPYGMLSQGSKWGDHCTITRWAEQHLTPQRnaFVVHRLDRAANGLIIVAHEKKAAALLSGLFQSRQIEKRYQ-IWVEGEFSEQATVDNPVKVDLDLDGRHAVSF--------FTRLKFDASKQQSLLDVRIETGRKHQIRQHAASLGHPVVGDRLYGNILQQEN---LQLKAYFMAFRCPYTAEEKQF------
>UniRef50_B3PEA2(111-286:291) Putative pseudouridylate synthase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEA2_CELJU  E=5e-27 s/c=0.70 id=32% cov=79%
---------------------------KPHGLLAQGSQWGDHCSLLRWVEVVRQRECFLVHRLDADAAGLILIAHDAQAAAALSQLFQGRSLRKHYQAWVSGELQATGLRLEQPL---------------DGKDALTWvNTAVIDQPNNRSLVDVRIETGRKHQIRRHLAAIGHPIMGDKLYG----QANQQPLQLLAWQLGFECPLLKRPITISLPEP-
>UniRef50_C3WHA9(84-273:295) Pseudouridine synthase n=4 Tax=Fusobacterium RepID=C3WHA9_9FUSO   E=5e-27 s/c=0.65 id=25% cov=87%
---------EELKSMIAYENENLFIINKNLGDVIHKGSGHDISLLEEFRSYYSNNKINFVNRIDKLTSGLVIGAKNIKTAREIAKEIQLGNILKKYYILVYGKIEKEEFILENYLKKDEEKVIVSDVEKEDYKKSITHYKRINGDND-YTLLEAELKTGRTHQLRAQLNHLGHTIVGDTKYGKNIKEDI---MYLFSYYLKID----------------
>UniRef50_P75230(71-290:326) Uncharacterized RNA pseudouridine synthase MG370 homolog n=4 Tax=Mycoplasma RepID=Y548_MYCPN  E=6e-27 s/c=0.56 id=24% cov=86%
-------------LQVIFEDEQLIVVDKPAGVVCQPDAKHELFNLANSLLKHCGYNQyfknslsfipRFAHRIDRNTCGLVIGAKTNQALQELEAVFRHNLLMKQYQGL-VFGPFNFKGTQKAYWAKDAYQALVTVKAKpfPNAKPITTIFENSKYLTKlDLSLLTIRLVSGKTHQIRACLNLLNTQLVGDRKYqllQFKNRNRDFKHQALHATNLSF-----------------
>UniRef50_A0YDZ6(85-264:280) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDZ6_9GAMM  E=2e-26 s/c=0.67 id=26% cov=79%
---------------------------KPYGVLCQGSKWGDHCTIDRMIEIYTQKRSYLVHRLDRATTGLMIIAHSKDMAAKLSKLFRDRAIDKRYLAIVDGDFPYC-------------EKKQTITSTLDGKKAISHMRRLRYSqRHHQSLIDVNIETGRKHQIRRQLSDQGYPIVGDRLYNPaGDDKQHTADLKLCCYSLGFKCPITHIKV--------
>UniRef50_A5DTZ4(103-279:430) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DTZ4_LODEL  E=2e-26 s/c=0.68 id=29% cov=79%
--------PEN-PISVVFEDDDIIVIDKPSGIPVHPtGSYMFNSLSEIVKEMFNFDNIWTCHRLDKVTSGVVILCKNRDAAVKFLNILLEKsdKVKKIYLARVNGKFPDGVYRYTCPILAVNMNGYIQPSNLESllTLTSTIFERVNFDSLSNTSIVRCQPISGKFHQIRIHLRNLGFPISNDLFY--------------------------------------
>UniRef50_A4S7H5(47-309:318) Predicted protein n=2 Tax=Ostreococcus RepID=A4S7H5_OSTLU   E=3e-26 s/c=0.46 id=30% cov=93%
----------------VYVDDDVYVLNKPAQTYVHdierlvergmvkcdDATTVDNRATTRDVPFNASESARVVHRLDRDTSGCLVVARNRDAIRSLSAQFADGTVQKTYVALCAATADYDGVEDHRRVFTGWGRAKYGLFRLYDAadigralpgnkkvkvKHAETTIIVERvitdgvalrfcepptaddadRRRHRVALARCSPLTGRTHQIRLHCASLGLPLVGDVRYGGPiaatrdgpiDAPFSARRVAgalLHAERVAFRHPKSNLRVDVHAPRP-
>UniRef50_Q0F2T6(92-286:291) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2T6_9PROT  E=4e-26 s/c=0.62 id=36% cov=72%
-------------------------------------------------------ELRPVHRLDRDTSGLMLFSASAAMLQHLQAHWHD-AVEKRYLAVVSPAPDWDDQRIRLAIDRNRDAHGRYH-LSPDGRACDSEAHVVER-RDNRALVELVPHTGRSHQLRVHLSALGCPILGDSRYGGKPH----PRLMLHAVSLCIRPPALPETKQWNQPPE-
>UniRef50_C4XKF0(88-262:290) Putative pseudouridine synthase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKF0_DESMR  E=2e-25 s/c=0.67 id=26% cov=79%
---------------------DYVLLNKPSGLHS-AALAQGGGESVEALLPDIFPGRpsFLLSRLDSLTTGLLPAAFSPEAAATYRDMEESGEVDKTYLAVGHGEPDVTYFRCDGELDAADRKKTRVLDRATIDSLRMTEVEALETRG-GVTLFRCTIKKGARHQIRTHLAWAGHPLVGDPLYGQGEGE----RLFLHCAGI-------------------
>UniRef50_A8NJ16(2-216:268) Predicted protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJ16_COPC7  E=1e-24 s/c=0.53 id=32% cov=88%
--------------------------NKPAGLVSQLGRqlpemkTRDTLDKVLKQIERRLELKealRPLHRLDTATTGCLAFATTQTSARSLSKQFAQGQVEKSYLALVSGGKETFPGTSGRIDTPIKYQDGYFDGLGTGGKLSLTEWSLLASSPVlPISLVRLNLLTGNKHQLRIHMAkKLGAPILGDDRYSSSKVASKLlsegrikPNLYLHASDIAFVRyrqrgPQKRFRLGITAPLP-
>UniRef50_A2EYQ7(118-278:353) Ribosomal large subunit pseudouridine synthases, putative n=1 Tax=Trichomonas vaginalis RepID=A2EYQ7_TRIVA  E=2e-24 s/c=0.71 id=33% cov=74%
------------------ETDNYVAYLKPASV-TVNTVGGYFYNSMVKRLP---PHLHVVHRLDRVTSGIIVFAKNKAAATNFNQYLVGEKVSKTYIARVIGRFPKGEIICDQPLGTD--FNLHRTVVTPTGKPSKTIFKLLKTNGK-ESIVEAHPITGRTHQIRCHLQYLGYPITNDEMYGGKRE---------------------------------
>UniRef50_Q73NR9(12-236:261) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73NR9_TREDE  E=6e-24 s/c=0.50 id=26% cov=88%
--------------EVIFENEAYAVLYKPRGMPTAPLSEDEEGTLVSWFLKRCPEavsvkgkkdiEAGLVHRLDTATSGLVLMAKNQESYDALNLMQGNDLIKKTYVAFTDIDNESDLNADFSRLnlpyrissqfrsfgpkgKKVLPVFYGMRDFSSTAKIYTTNIIDINNLDDSVPRVTCTLTQGFRHQVRAHLASIGLPIYGDPLYNGKfkdfpqeKIEDHSYPLQLYAVGLSFPEP--------------
>UniRef50_C1DA62(7-200:236) Pseudouridine synthase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA62_LARHH  E=1e-23 s/c=0.58 id=30% cov=82%
------------------EQAAFLVIDKAPGTHVHR---DGEATGLMDRLRDDTGCDtlHLVHRLDAMTSGLLLVARSADAAAALGQALAARQVEKFYLALSDRSPRKKQGWVIGDMERSRRASWKLLPTRQD--PAVTQFFSAA-AGDGRRLFLLRPRTGRTHQLRVALKSLGAPIWGDPLYHPQEPGREAPdRGYLHSYGIGFV----------------
>UniRef50_D0N321(270-457:556) RNA pseudouridylate synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N321_PHYIN  E=1e-23 s/c=0.59 id=30% cov=75%
---------------VVYEDDDLIVVSKPPSMPTHPCGAYRHNslHTILQATRPDLPQLNIVHRLDRLTSADRQASKTYLARVRGRfpdvlsSEVQDKLVT---QAKEICPasiitfPEEGAVLISCPLRCLSARDGVWE-CHEEGKPSETLVR-LVRTDKCTSLVKCKPVTGRTHQIRLHLQLIGFPIANDPCYGG------------------------------------
>UniRef50_D1UAP7(72-279:289) Pseudouridine synthase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAP7_9DELT  E=2e-23 s/c=0.53 id=25% cov=92%
--MADLMPQDIPELRVVERTDLFAAVYKPGGVHS-AAIAGKDGLSVEAALPALFPDAAPVllNRLDFPTSGLLLVALGPDGAETYRASEEAGGVRKFYLAVVHGRLDGMISVRNRLDTDDRPRTRALAEEDADARRWTSVNALAHDHDRDTTLVRCLIMKGARHQIRAHLASLDHPIVGDTLYGvpdaatGGEEIGSGPLLHLHHQRIELP----------------
>UniRef50_Q55AQ0(14-302:316) Pseudouridine synthase family protein n=1 Tax=Dictyostelium discoideum RepID=Q55AQ0_DICDI  E=2e-23 s/c=0.38 id=37% cov=87%
-------PPTDPKYETIYLDKEYIVVNKPFDVN-IDDETGERLTTVVKYIETEYPEHfgnvRFVNRIDYATSGLVVVSFNKKSTTVAMELFQSRETSKTYLAIVHGHMEFDESIIDKPIQYDtsDENSFKMCVVEDinnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnqstttttitttttiknksnPAKASQTSYKVLERgylkinndEYIPITKVMLFPKTGRRHQLRVHLLSIGHVIVGDETYGPKDS--TIHRMMLHSWKL-------------------
>UniRef50_C8PQG0(2-196:231) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQG0_9SPIO  E=4e-23 s/c=0.56 id=27% cov=80%
--------------------------NKPAGIPVHGSSSIDTLLSAASvltpsaeppaavpdtdgrvHLHSLSFKPGPLHRLDKDTTGVLCFSRTLAGAQWFSQCLREKTVGKYYLGVVRGAMPAQPITAQ----------------DENGATMTQCYSVEYCKDIDASLMLFRLITGKKHQIRKHTESVGHPLAGDRKYHGGNPLPGCKHYLLHAWRLYFPalRPAD-IPASIEAPL--
>UniRef50_A9FG19(68-288:326) RluD4 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FG19_SORC5  E=4e-23 s/c=0.49 id=26% cov=95%
--------PGAPPVEVLARWGELLVASKPAALPTEPErRGTRSLVTEVAELLGLRDLPHAASRLDVGVSGAVLCATGARGRRHVVAMREAGRIARVYVGVAGGRV-EGSGTWDAPIGaaRARGGRSLPAVGGADAKDASTHYRavaSAGGGAAPATLLRLDPVTGRTHQLRVHAAHAGAPLLGDRDHGGARSVTtargrviPLSRVALHALRVTVPD-ERGELCAAIAPVP-
>UniRef50_UPI000186EBC6(36-199:227) Ribosomal large subunit pseudouridine synthase A, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EBC6  E=5e-23 s/c=0.66 id=36% cov=72%
------------------------------------------------------------HRLDYSTSGVMCVALSKKSCAAASIAFQEKTTKKYYLALLRGHVSKREIELNAPIGETIKKGLKIMSSEVKGAlPACSRLLVLErgiYDSYPATKVLLRPLTGRRHQLRVHCNIIGHTIIGDYTYSQKK-DVSPPRMFLHSIRLII--PNSIELLDVSTEDPF
>UniRef50_C5J5W4(81-262:284) Ribosomal large subunit pseudouridine synthase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J5W4_MYCCR  E=1e-22 s/c=0.59 id=24% cov=82%
-------------FDILYEDSNILVVIKPRQtaMHSHKFSLDNQVHKYLNIKMADIFKPAHIGRLDKDTTGIVIYAKNYQTALEMNK--KQHFFVKRYVFKSDIDLKEK--VDVKLWIKKNDDLKKMEVSQEKTQNSQLAITSLFLIGNNKI---AQLQTGKKHQIRLTLSHLGYPIYGDQKYSS----FKLMPMFLHCFFLQLN----------------
>UniRef50_UPI0001793647(136-259:259) PREDICTED: similar to RluA-2 CG6187-PA, partial n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793647  E=4e-22 s/c=0.85 id=25% cov=53%
---------EDLGIEVYYEDKDVAVVYKPKGMVVHPAPGHYTGTLVngLMYVIKDLSgingeiRPGIVHRIDKDTSGLLMIAKNDIAHRGLVEQLVDKTVTREYTALVHGNIPHEFGTIEAPIGRNPKERQEM----------------------------------------------------------------------------------------------
>UniRef50_C1MPG5(72-335:348) RNA pseudouridylate synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPG5_9CHLO  E=8e-22 s/c=0.40 id=31% cov=86%
----------------------FVVVRKPAGVYV---------DDVLAALERDASasasaspspsprRLHLAHRLDRDTSGCLVVATSTRACAALTRAFADGKVRKEYLAHCSSAAASSSSEPREPdpspspsldgarpltlrtgHGRSRNGLWRVYPLSDVGralprdpgrkttlvKIAETSLVVVATAAarggggggerSRCAYVRATPTTGRTHQIRLHCAHAGAAIVGDVKYGGPRVveeeeeeeekeketqeddaliDTRFDGFRLHAAKIAFPHPTReGQTVEVECPPP-
>UniRef50_B7XJU4(71-322:331) Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJU4_ENTBH  E=8e-22 s/c=0.42 id=31% cov=90%
------HEPKQPHIPTIYIDDEITVVNKPFGIPCHPVGAYHYYTVTKTIFK--NKPVGCVNRLDIPVSGVLIIntCNQKRIHEYLLNS------KKIYIAkvigqfifsdeqLHKLGIEKRISNGKSIIIVNKslllDPKTKKQKISDDGKFAETHFELVSY-QNQYSMIKCYPITGRTHQIRVHLAYIGFPILYDTLYGSypaykfnslyncntdisqfenqklykfviKYCPGPQNRtcsiqnqyICLHAWKYIFN----GKA--FTAPLP-
>UniRef50_UPI00019264FF(32-215:329) PREDICTED: similar to RNA pseudouridylate synthase domain containing 4 n=1 Tax=Hydra magnipapillata RepID=UPI00019264FF  E=2e-21 s/c=0.57 id=29% cov=75%
----------------LYMKDGLLAIHKPYGIPVHGGP--KIKLSIADFLPALEQKHGllagsleLAHRLDKNTSGVLLLTYKKEMAKYLADLHENRQIEKSYLAILLGNVSRVTGVLNGELHETLRNGQFKQTINEISINKssvETNYTILDSNQDTCMLCLFKTFTGNKHQIRVHAYElLKCPILGDHRY--------------------------------------
>UniRef50_Q5XET6(181-373:478) RNA pseudourine synthase 3, mitochondrial n=10 Tax=Magnoliophyta RepID=PUS3_ARATH  E=4e-21 s/c=0.53 id=35% cov=77%
---------------VRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNdegPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKgrnssckawnkaceaMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVvlaqgsgFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAeALGTPIVGDYKYG-------------------------------------
>UniRef50_C1MYF0(65-420:443) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYF0_9CHLO  E=6e-21 s/c=0.29 id=34% cov=94%
--------------MVLYRDDDVLVLNKPSGLPVVGtgtGNANAAAPSLSAMLasltfhadAPWKPPLTIVHRLDKDASGCVVLARRAVAARTLARAFAAKSasggegareeeeegllgggraesdalynIERTYWALVAGRPSRDEGVIRAPLRIPGKRNGNTKRrdggvvffaddatderrarlprppdvapgggggasegrveatteDDPRGVRAVTSYRVIgevprdadgddgdddeKVTHPRPTLLELTLSTGRKHQIRVHLAsALGTPVVGDYKYGYRDTPRTRRgreiappawmealrdveaaarrgsgtirdpasaaawrarrslaladddgggvPLHLHARSLRFPKPSGGDVVRVVAPLP-
>UniRef50_B6KIC7(94-465:493) RNA pseudouridylate synthase, putative n=3 Tax=Toxoplasma gondii RepID=B6KIC7_TOXGO  E=2e-20 s/c=0.27 id=37% cov=96%
--------PDEKPLDVLYEDDDIVVINKPAGLLTHPpqltvenidkhnrlgsvvqrlfykflcsdgmfpetflplakqaafRKLNRNGCTMASRKTEEHPFKEstgdaggeapvegprgptaecadgpssvrmprmqlalpeaisrpvsIVHRLDIGTSGALVAAKTAAAAENLKLQWAERKVLKGYIGLCTPEI-HSLHEVDAPLRRHPTQRGRMEalsnesrssfhdVCDETAQKDHSSYRIGAKPGvsvfaplggnGAYGMFAALALTGRTHQIRAHLEYIGHPLLGDLVYGNQTVNEELRRFvknvvvnprhhreeaatrmtrkevqvsccdagpdvlapagnvkvhmrpFLHAYFLRFAHPRTGAAVNIKAlpPAD-
>UniRef50_UPI0000384AA5(1-147:166) COG0564: Pseudouridylate synthases, 23S RNA-specific n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384AA5  E=2e-20 s/c=0.69 id=26% cov=66%
----------------------------------------------------------------------MILGRHAKSIKRLGRMFEHHRVEKLYWSVCHGSPEGDSGTVDAPLLKVSGRGQGWRIkVDPAGQSSITDWSVLGR-GGGLSWIEWRPRTGRTHQIRIHAQHLGCPLLGDAYYGPDPE--TMTRLHLLAREVSFPalSP-SKDPVRVTAPPP-
>UniRef50_UPI000185C39D(31-312:317) RNA pseudouridine synthase family protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C39D  E=3e-20 s/c=0.35 id=32% cov=97%
---EEYIPFEPV---IVAGTDEFLVVDKPPFLPATPN-GRIVANTVQERLRRSLGESEIvaVHRLDLLTSGLLLLSRNPATRARYQQLFQNQEITKEYECLTVMPDDWHVGeTRDVTLLLDPNPAGRGVKVVETDvsaraaaknpkfKLARTTVTFLgpvaadigdvlassrgggsgggatsasiplhavgcgcghCGSSMQVGYWRLQPHTGRTHQLRVTMDWLGYPILGEDTYGReagaqgpsasaGSAPTYTPQLRLTATALAFVDPVTGERrayrsaRNIAAPAD-
>UniRef50_C5DSY2(3-202:250) ZYRO0C03894p n=2 Tax=Saccharomycetaceae RepID=C5DSY2_ZYGRO   E=4e-19 s/c=0.48 id=29% cov=78%
----------KPVLKIVHECNNYFLINKPPNVLSQPGNVHRwiyhglyknqhvnTPKVLLDELksqsstsKRDFDSWRLVHRLDSCVSGGLLVATNKNAAKYFSRNLKEGgnkgyKIDRRYVA-----------MIDNPGKGDPKYLNEYGIIDKMGM-------VSKYRRFDEKCILVELSTGQKHQIRKHLSHIlKQPVLNDVKYGGPLLPHTDPlQIALHAA---------------------
>UniRef50_Q06244(7-205:254) Pseudouridylate synthase PUS5 n=6 Tax=Saccharomyces cerevisiae RepID=PUS5_YEAST  E=3e-18 s/c=0.47 id=27% cov=81%
-------------IPIIFENTHYFIVNKPPGIPSQPpdcrTWGRTHPNLdptpLLERFKAIYYShrevelCRTVHRLDHCVTGGMLIAKTKDGSVKFSRFLQKGgnngyKLQRKYVAIV-----ESSGRFNKPNNYEIKYGPKYNFLISHGGREITKFKEVDEN-----CIVLQLVTGKKHQIRNHVSQIlNQPILNDKRHGSTVnfPELFNDQIALHSACI-------------------
>UniRef50_B8LBQ6(181-348:405) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBQ6_THAPS  E=4e-18 s/c=0.56 id=38% cov=68%
--------------------------------------------------------------LDRATSGLLVVAKTKPAMVDLSSQFKHRKVKKTYTAIVNGDIQERPessissreaKQLGVCIENTGSHDFRWQFVDEelDGQSAVTIWRTvdkssLEYAWNNTiAMVELKPKTGRYHQLRRHMAWVyGCSIVGDKSYDGSGQAKLLRneGLYLCSNKVTLQHPFYNTP---------
>UniRef50_B7G4K5(55-406:418) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G4K5_PHATR  E=4e-18 s/c=0.27 id=34% cov=91%
---------------VVYETDHFLALNKPPDLRM----DGHHPSTVLKLLTYWYPppafqnlqskgllekvsefenyrniegnELRPCHQLDYATSGILLVARNRQAADQARVSFEERSTRKTYLALVHGHlsvPSNIPVMRRTDIDERmgrleeiyRQSRRKHRKDTYRGyqpahglfqqlqqqhnhilnlswkevkasgktepfdraaevfnklqyktlfpedksaelslptffrdesedpntlfiyasvaqvphdfamrinpsmsnasaylkvgdssldyKPSLTRCVILKHAairGQPVTKVRLEPRTGRRHQLRVHSALLGHAIVGDQTYKAPGSPDLTDRMCLHSQCLEI--PLFEELIKVEAPDPF
>UniRef50_C7LVN5(79-250:281) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVN5_DESBD  E=5e-18 s/c=0.54 id=25% cov=79%
------------------RNESFAALAKPDGLHTVAGQEAACLESCLPGL--GLEGWELLNRLDCLTSGLVLAAAEKRDAAAYKVWQDAGQVSKWYLALARGEVA--TLECRGRILDDKRSVVRVTAD-EDEPLRWTRVRAL-RQIDGNTLLLVKIFKGRRHQIRAHLAHAGHPLIGDPVYGVCEP----GGLYLHHWRL-------------------
>UniRef50_B7FYH0(78-308:311) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYH0_PHATR  E=2e-17 s/c=0.40 id=25% cov=89%
----NHVEPTFIHgnVTILARTDRYVVVAKPPTVVCHhsewtGSRSDPFQIPMLQRTREamGGNCVNLVHRLNWGCSGCLLLTYAADTADAEiyipnttatlIASMKETASLKTYLALVRGEglLQGRDFKQEGWFKVDRPIKNEKGILN----NATTWFRFVagqdndsgRINQPRASLVLARPETGRWHQIRRHLNGLSHPILGDTSHGNSHVNRewrdlrgmPAQRTCLHLARLQL-----------------
>UniRef50_Q05FL2(2-190:204) Pseudouridine synthase n=1 Tax=Candidatus Carsonella ruddii PV RepID=Q05FL2_CARRP  E=2e-16 s/c=0.47 id=24% cov=84%
-------------FKINYFDNNIIVINKPIGIEV-----KNLLNVNFIKLNDKIPNFGILNRLDKYTSGLILVAKNFYFYFYFKKLIVKNLIKKNYISFVNKKIKKGFVNVDIFKKKKSSIIKNNKKSI-------TYYKIIK-EKKNFSFLNICIKTGRTHQIRLHMMHIEKKIFNDFYYNKTYLLNNT----LHFKKMMFYYPFIKKKINL------
>UniRef50_Q47QM5(197-337:375) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=Q47QM5_THEFY   E=2e-16 s/c=0.62 id=25% cov=63%
------------------------ALNKPRGVVSTMFDPEGRPTIgdYAAQIGPIEERLFHVGRLDTDTEGLILLTNDGELANRLTHP--RYKVTKTYLAKVP-----------GPVPRDVIRQIRKGVELDDGFVKVDSFRVIDNI-EPKALVEIRLHEGRKHIVRRLMKAVGHPV--------------------------------------------
>UniRef50_O67444(44-203:249) Uncharacterized RNA pseudouridine synthase aq_1464 n=4 Tax=Bacteria RepID=Y1464_AQUAE  E=3e-16 s/c=0.55 id=24% cov=63%
-----------------------IILNKPCCYLTQLGRSPDGRKTIEELIKDIPERVFPVGRLDYNTEGLLILTNDGELANRILHP--RYKLPKVYLALVEGKVDQ-----------KTLKRMKQGIELEDGFAKPDNIRIVRYEGKNT-LLEITFHEGRKHLVKRFLGAFGH----------------------------------------------
>UniRef50_C6PYN7(96-173:173) RNA-binding S4 domain protein (Fragment) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYN7_9CLOT  E=4e-16 s/c=1.12 id=28% cov=33%
-------EPEKMDIDVVYEDSDLIVVNKQPGMVVHPTKSYPNG-TLANGLLYYFKEKgeqcivRLVSRLDMDTSGLIIIAKNQFA--------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_P70863(128-221:221) Pseudouridine synthase (Fragment) n=1 Tax=Bartonella bacilliformis RepID=P70863_BARBA  E=2e-15 s/c=0.90 id=39% cov=42%
----------------LYEDPKIFVFNKPAGLAVQGGSGlTRHVDGMLEAWRnKKGEKPRLVHRLDRETSGLLVVARSXXAAQALTAAFRTREMKKIYWALVRRXPXKKQ---------------------------------------------------------------------------------------------------------------
>UniRef50_Q5DGR1(245-502:567) SJCHGC01427 protein n=1 Tax=Schistosoma japonicum RepID=Q5DGR1_SCHJA  E=3e-15 s/c=0.33 id=30% cov=84%
--------------------ENVIIMNKPYGIASQPGADCKHNIVdLLPRIESMIRKRNHraskvkeetvdelstVHRLDKDSTGAMLIARNRDASLKLQEAFARRWIKKDYLCITVGIPRSEYGYIQLPLVERNFKEFHKMCIpkldrhlqelackqtqldenDETNEYDVTDAFSVLYNKmqtnnnnqpvtwyhlldqrNDAGLMLCSTLTGIKHQVRAHLAfGLQTPILGDHKYSHGEylapqrlpkhlLEALNVRQpkvrylalHLHASSLHLR----------------
>UniRef50_Q042N1(65-215:245) Pseudouridine synthase n=3 Tax=Lactobacillus gasseri RepID=Q042N1_LACGA  E=6e-15 s/c=0.55 id=22% cov=63%
--------------KIAYQQYHYFLLNKPKGVISATEDRSQQTVISLLKTKDRYQGIAPVGRLDKDTTGLLLLTNDGALAHELLAP--NKHVAKVYRAKIAGVPDP----------ETAKKFAQGLILGDGTKLKPAKLKILKQDQDnNLSQIEIQIQEGKYHQI-------------------------------------------------------
>UniRef50_Q04F57(49-204:237) Pseudouridine synthase n=2 Tax=Oenococcus oeni RepID=Q04F57_OENOB   E=7e-15 s/c=0.53 id=22% cov=68%
--------------DIVYVDNkkineesfEYYLLNKPAGYVS-SNRSYPNQPSVIELIKTKT-RIFSVGRLDQDTTGVLLLTNDGELTQKLTHP--KHRIKRTYAAWVKGIVNE-----------DEIEQLTKPIRFDGEIYFPQAARILKVDQKRqESLIEITIAEGKNHEIKKILDFIGHPVI-------------------------------------------
>UniRef50_C1MVV0(139-354:539) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVV0_9CHLO  E=1e-14 s/c=0.38 id=30% cov=75%
---------------VLTEDERVVIVDKPPGLPTLAGvgpgvAGENNAVAVLRRLRAsasasakrkreesddggggggggddDDAPLFAVNRIDKPVSGVWILAKGSRLSARARDALHKgaarGETRKTYVALvkgrvevGGGGAGGGGFVVDAPLRKDE--RGLAVVGGDGAKPAATRVVPLAVvavpskggggEKEALTLAAVALEkSGRYHQIRAHLAHVGHPIVFDRDY--------------------------------------
>UniRef50_Q24V73(75-217:257) Pseudouridine synthase n=3 Tax=Bacteria RepID=Q24V73_DESHY   E=2e-14 s/c=0.57 id=22% cov=63%
-------------------------LHKPTGYITSVTD-PQGRKTVMELMPKIPRRVYPVGRLDYDTSGLLLLTNDGDLAHRLMHP--SYGVEKTYRVEVGEKIPEQ-----------ALKRLEKGVLLEDGKTAPARIREVSPKGRGSLPtYEITIHEGRNRQVRRMFKAVGFPL--------------------------------------------
>UniRef50_A6LIA0(310-475:495) Pseudouridine synthase n=23 Tax=Bacteroidales RepID=A6LIA0_PARD8   E=9e-14 s/c=0.48 id=24% cov=25%
------------------ESKVYIVLNKPKNCVTT-SDDPQERLTVMDLVKnACQERIYPVGRLDRNTTGVLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6MZI4(55-203:240) Pseudouridine synthase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZI4_9GAMM  E=2e-13 s/c=0.52 id=23% cov=68%
----------------------LILFNKPFAVVCQFT-GEKHEHTLAEFI--DKPDFYAAGRLDKNSEGLLLLTNDGALQHQLTHPKFNK--KKYYWVQVEGIPTAADLEPlkKGLVLKDITFLPAEVRCIEEPALWPRTPPVRFRQSIPTSWLEIILREGKNHQVRRMTAAMGFP---------------------------------------------
>UniRef50_C0EB54(59-203:248) Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB54_9CLOT  E=3e-13 s/c=0.54 id=20% cov=64%
-----------------YQEHLYLMLNKPQGVVS--ATDDKVHRTVLDLVPPELRRRglFPAGRLDRDTVGFVLITDDGEFAHNILSP--RHHVPKTYEA-----------GLDGPIGENELSVLAQGVVLGDGTKCRPAELTVLQSGERP-LIQIVIVEGRYHQIKRMFAAVG-----------------------------------------------
>UniRef50_A2S4Y2(46-195:235) Pseudouridine synthase n=7 Tax=Burkholderiales RepID=A2S4Y2_BURM9   E=9e-13 s/c=0.50 id=22% cov=68%
----------------------LIALNKPFGTICQFSA-HETRASLGDWVK--TPGVYPAGRLDADSEGLLLLTDDGALQAKIAEP--RHKLVKRYWAQVEGAPDaaaLAALERGVDLGDYVSRPCRARFITPPGALWPRNPPIRHRAAIPTAWIELEIAEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_C7H5G4(61-223:294) Pseudouridine synthase n=8 Tax=Clostridiales RepID=C7H5G4_9FIRM   E=1e-12 s/c=0.46 id=24% cov=29%
----------DPNRDVLHVDDeriyiqknqqlYYLALYKPRGYVTT-ASDELGRKTVMELVSDIPARLYPVGRLDKDSEGLLLM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q5ZXB8(26-174:222) Pseudouridine synthase n=2 Tax=Legionella pneumophila RepID=Q5ZXB8_LEGPH  E=1e-12 s/c=0.51 id=23% cov=68%
----------------------LILFNKPYGILTQFT-GELPEQTLSAFIK--LPGFYAAGRLDKQSEGLLILTDDGKLQHRLTHPKFEK--KKHYWVQVEGVPtdKDLQPLRKGLVIKDITFLPAEARLISEPKIWPRIPPIRERKHIPTTWLEIILREGKNHQIRKMTAAIGFP---------------------------------------------
>UniRef50_P72581(42-191:261) Uncharacterized RNA pseudouridine synthase slr0612 n=16 Tax=Bacteria RepID=Y612_SYNY3  E=1e-12 s/c=0.50 id=22% cov=68%
-----------------------IVFYKPYGVLCQFTDNSAHpRPTLKDYI--NLPDLYPVGRLDQDSEGLLLLTSNGKLQHRLAHREFAHQ--RTYFAQVEGSPTDEDLEPlrRGITFADYPTRPAIAKIITEPDFPPRNPPIRYRASIPTSWLSITLTEGRNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q1IJT7(65-225:680) Pseudouridine synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJT7_ACIBL  E=2e-12 s/c=0.47 id=20% cov=68%
-----------------------VLLHKPKGYVTTVSD-PEGRETVMDLVKGIPARLYPVGRLDYLSEGLLLLTNDGEMAAKLTHA--STHVPKKYLVKVSGEPTEEQIQELRNGVQLPPEQGHIHADPREGgrfggekrrstavKTAPCKIE-LTREGDNP-WYEVTLNEGRNRQIRRMFDFIGHHV--------------------------------------------
>UniRef50_A6G735(88-235:300) Pseudouridine synthase n=2 Tax=Bacteria RepID=A6G735_9DELT   E=2e-12 s/c=0.51 id=22% cov=64%
------------------------VLNKPDGVVSSaaGSVDERGRPTVISLLHGVSERLYPVGRLDFHSRGVLLLTNDGGLAEALTHP--RHGVVKTYHVKFQGK-----------LTEEQEQLLRDGVELDDGAITRPVAELFAFRETATnVWYQIGIREGLNRQIRRMGEAIGHPVL-------------------------------------------
>UniRef50_C1MJ36(166-477:483) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MJ36_9CHLO  E=4e-12 s/c=0.24 id=32% cov=91%
--------------------DAFVVVDKPAGVNV-GFTVDNAKECVAQCVARALGDAFaengsdssstdsstecsswgwadatpliVTHRLDAATSGVLVLARDVEFARHFNDALRERKVQKTYACVSEARVPvgvmehwtdpedatrgPRRHVMRPPREGDTPWEERGGGGGETStsiaeeraekaaattskqkksqrqkkrerRLAKAEEFVHPDGRRRCVLRVLTceevkipgekagdappryestveLVTGRTHQIRAQFAASGAPLLGDVLYGGARVgrgtgegegEGEAPRvlgnddaLCLHASEIRVDvaGPLGRSGTTFKASPPW
>UniRef50_Q6CQC4(33-228:299) Pseudouridylate synthase PUS5 n=1 Tax=Kluyveromyces lactis RepID=PUS5_KLULA  E=6e-12 s/c=0.37 id=26% cov=78%
----------EFPLKVqeLWRDKHHVIFNKPPLALSQlPDKRtwynthDYDPPVLLDIVQsssgsilkdgTYEPSYYPIHRIDTPVSGGIVYAVNKQSAQQFSRNLRYGgnkgfSLTRKYVA--------------------KVGKSKTANECKEGLIKWNGAITYFQRVDNEHLI-LQLVTGKKHQIRKLTQQvLDSPIYNDLKYGGKKVFDSDFQIALHSAYIR------------------
>UniRef50_D1PIW4(64-233:237) Pseudouridine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIW4_9FIRM  E=6e-12 s/c=0.43 id=22% cov=57%
-----------------------IMLNKPEGVVS--ASRDKRDTTVVDLVAADFPRRalFPAGRLDKTSTGFVLLTDDGALAHDLLSP--AHHVDKQYLV-----------TLDTPLTDAMRAGFAAGVTLADGETMAPAEA--EPAGEDPCVVKVTLHQGVYHQI-------------------------------------------------------
>UniRef50_A1U6Q2(53-193:231) Pseudouridine synthase n=4 Tax=Gammaproteobacteria RepID=A1U6Q2_MARAV  E=7e-12 s/c=0.52 id=23% cov=64%
--------PVNPPGDI------YLMMHKPAGVLS--ATTDSSQPTALDLLPRGLAsRVHIAGRLDKDTTGLLLLTSDGQWSHAVTSP--RRECRKSYRVWLAEAIPEQ------------ACRALEKGVMLNGET--TETRPAEVRVHNNQLIDLTIGEGRYHQVKRMLAAVG-----------------------------------------------
>UniRef50_C8NZC3(68-212:246) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZC3_ERYRH  E=7e-12 s/c=0.50 id=23% cov=63%
------------------------ILNKPRGIVS-SANDDKDRESVVDLVPNDI-RVFPVGRLDRETTGALILTNDGDFAYYMTHP--KFDLSKIYRV-----------SVRGRLSYEVTNSLKEGITIEGVEYKGVEISRVKYdAAKDKTQFSITLHEGKNRQIRKIFAHFGLPVL-------------------------------------------
>UniRef50_Q1GHH2(7-157:221) Pseudouridine synthase n=12 Tax=Bacteria RepID=Q1GHH2_SILST   E=2e-11 s/c=0.48 id=21% cov=55%
----------------------------------------------------DCPGVYPAGRLDRDSEGLMLLTDNGRLQAWISDP--KHKLEKTYWVQVEGIPTEDalkALRQGVDLKDGMTRPAKAELISEPAQLWARTPPIRERKSVPTAWLELKISEGKNRQVRRMTAAMGYP---------------------------------------------
>UniRef50_Q6G8H4(40-191:231) Pseudouridine synthase n=61 Tax=Firmicutes RepID=Q6G8H4_STAAS   E=2e-11 s/c=0.47 id=27% cov=22%
-----------------------IMLNKPKDYIS--ATEDHHSKTVIDLIPEYQHlNIFTVGRLDKDTEGLLLI--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q2NIZ3(62-205:245) Pseudouridine synthase n=5 Tax=Candidatus Phytoplasma RepID=Q2NIZ3_AYWBP  E=3e-11 s/c=0.49 id=21% cov=64%
-------------------------LNKPNGFLST-AKDKKNRPTVLDLIEEaSIQRLYPIGRLDFNTTGLLLITNDGDLTQKLTHP--SFCIPKEYHVkINACLQKKDLSTFCKGIIIDKKYLAVCKEI---------DILKISYMPKPSTWLKLVITEGKNRQVRKMMQALGYQVL-------------------------------------------
>UniRef50_Q6AKZ6(34-201:544) Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKZ6_DESPS  E=5e-11 s/c=0.42 id=20% cov=77%
--------------PIIYKDAQLLVVDKPTGFSSQAMTEGEVGITEWLALHLQY-QIDLYSSLTKSCSGVLLLRRKNQIEKAENDQPV-KIAEKKYHFISAKRYRGQTEEDGSWLVERDNSITEESV----------RFRFLEEGRDYSLYEAATLSCCRR--VQEFAEESGIAIVGD------GADSPFARLFLHCHSIRL-----------------
>UniRef50_C1F236(86-230:406) Pseudouridine synthase n=8 Tax=Bacteria RepID=C1F236_ACIC5   E=5e-11 s/c=0.48 id=25% cov=37%
-------------------------LNKPKGYVTTVSD-PEGRHTVMEFFHgrgKGGERLYPVGRLDYASEGLLLMTNDGALANTLTKA--SSHVEKVYLVKVSGRPTEEQ---------------------------------------------------------------------------------------------------------------
>UniRef50_C4Z9Y4(71-211:250) Pseudouridine synthase n=16 Tax=Bacteria RepID=C4Z9Y4_EUBR3   E=6e-11 s/c=0.49 id=28% cov=60%
-------------------------FNKPSGCVS--ATCDNVHDTVMDYItDAVHDDLFPVGRLDIDTEGLLLITNDGALSHELLSP--SKHVAKTYYAR-----------IDGEVTLDDIIRFKEGIDIGEEKPTKPAELVIKKSG-SVSEIELTITEGKFHQVKRMFEALG-----------------------------------------------
>UniRef50_C2MA52(266-421:472) Pseudouridine synthase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MA52_9PORP  E=7e-11 s/c=0.45 id=20% cov=56%
-------------------------------------------------------RIYPIGRLDRNTTGILLLTNDGDLAVRLMHPaFRKK---KIYEVA-----------LDKEVTVEHMQMIAHGFELEDGEIHADAISYI--TGQTHDKVGIEIHSGRNRIVRRIFEHLGYRVVHlDRVYYAGLTKKDLPR---------------------------
>UniRef50_D2V9L8(457-551:579) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V9L8_NAEGR   E=4e-05 s/c=0.53 id=29% cov=26%
------------------------------------------------------------------------------------------------------------------------------------------------------------------QVRSHLATNGIPMLGDFPYFDQVDNRIPiglsknlnvNKIFFHLYKIVFQHPTSGKNVIVKAPL--
>UniRef50_B9KY92(69-206:282) Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY92_THERP  E=1e-10 s/c=0.50 id=25% cov=37%
-----------------------IVLHKPVGYITT-TADEYGRKTVLDLVQ-VPERVVPVGRLDRDSSGLLLLTNDGDLIYRITHP--RYELEKEYEVLVDGFPPP-----------------------------------------------------------------------------------------------------------------
>UniRef50_C7GZ55(62-216:250) Pseudouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ55_9FIRM  E=1e-10 s/c=0.44 id=21% cov=66%
-----------------------IAMNKPCGYVCTVSDELGRR-TVYDLLTDIDERLFTIGRLDKDSEGLILLTNDGDLAQKLLSP--KRKIEKNYEVVVRGVPGANDikklsggITIDVEISQTKQNKPVKSIVKYHTKPAK-IFEIGQKQGD--MKLSMIIKEGKKRQIRKMFDVIGH----------------------------------------------
>UniRef50_UPI00016C3D27(63-200:271) ribosomal large subunit pseudouridine synthase B n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3D27  E=1e-10 s/c=0.50 id=20% cov=62%
------------------------AVNKPVGHLCT-NHDPAGRPRAVDLLPHVEQRVYTVGRLDEGSDGLLLMTNDGDLAQGLTHP--RYGVPKMYFVLVAGRPTD-----------DDLQKLMDGVWLSDGKVRAKSAKRIKAQGNGT-WVRVVLTEGKNREIRRMLAKFGH----------------------------------------------
>UniRef50_C6VP86(52-205:246) Pseudouridine synthase n=4 Tax=Lactobacillaceae RepID=C6VP86_LACPJ   E=2e-10 s/c=0.44 id=24% cov=57%
------------------------VMNKPVGVIT--ATTDSAAKTVMDLFNTTDFRDdlFPVGRLDKDTEGILVITNDGALSHDLLSP--NHHVTKVYEA-----------EVTGEITAAQLANFNDGITLKDGtelQPAQAEI-VQFHEIENFTTIRIMIHEGKYHQ--------------------------------------------------------
>UniRef50_A8U4V7(62-231:239) Pseudouridine synthase n=10 Tax=Lactobacillales RepID=A8U4V7_9LACT   E=3e-10 s/c=0.40 id=19% cov=62%
-------------------------LHKPAGVVSAVSDAVNQTVIDLIEPSQRVPGLFPVGRLDKDTEGLLLLTNNGQL--GYQLLIPKKEVTKCYEVVVNERVTD-----------DDQLAFTAGIVFDGGVICKPAQLTILSQSDTESRVLLEISEGKFHQVKKMFLSVG-----------------------------------------------
>UniRef50_Q1D9N8(86-225:268) Pseudouridine synthase n=4 Tax=Cystobacterineae RepID=Q1D9N8_MYXXD   E=4e-10 s/c=0.48 id=21% cov=62%
----------------------VLAFHKPAGLLSSTERQHRTGTVFEALLPQLPPElagytWHAVGRLDVDSTGLLLFTNDDKLVAHATSPDA--HLPKRYVA-----------TVFSTASDERVEPLRRGMTLDDGPARPAKVNVR-----DEHTVEVTLTEGRHHQVKRMLGAVGLPV--------------------------------------------
>UniRef50_B7A9J5(74-213:245) Pseudouridine synthase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9J5_THEAQ  E=5e-10 s/c=0.47 id=19% cov=45%
----------------------------------------------------------PVGRLDKDTEGLLLFTTDGELLHRLTHP--RHKVEKRYLV-----------HLLHPATAADVRAFQEGILLSGEKTLPARL----HLGEDPTWVELTLLEGRFHQVKRMFQARG-----------------------------------------------
>UniRef50_B9MRL6(62-198:233) Pseudouridine synthase n=2 Tax=Clostridia RepID=B9MRL6_ANATD   E=2e-09 s/c=0.47 id=20% cov=47%
-----------------------------------------------------YRDLHTVGRLDKDAEGLLIITDDGEYTHRVISP--KKRIEKEYLVRLEKEVDE-----------EKLNEFENGIILDDGyKTLPAKYTII-----DSTTVKLCIYEGKYHQVKRMFEAIG-----------------------------------------------
>UniRef50_C1N350(62-203:230) Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N350_9CHLO  E=2e-09 s/c=0.46 id=21% cov=51%
-------------------------------------------------------RLFPVGRLDKDSTGLILLTSDGRLPNAALRSGRKR--DKKYLVVVDAVVRPEDVRMLRDGVVISTPVQRDRVDRVlTARTLPCEIDVV-----GARTLEITLREGRNRQIRRMLDAVGY----------------------------------------------
>UniRef50_D2UX35(151-290:362) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2UX35_NAEGR   E=5e-09 s/c=0.45 id=21% cov=62%
--------------------------HKPRGVLCSRVDNGGNRETIYQRLERmGFGHLISVGRLDYNSEGLILLTNDGNLSRHLELP--QTGLERQYLVR-------VHGQVSQPLLDSLQKGSTIEGVHYAGMKA-----TLHREGEKTSWIKVILHEGKNREIRKIFQQLNLPV--------------------------------------------
>UniRef50_D1R854(90-228:261) Pseudouridine synthase n=4 Tax=Chlamydiales RepID=D1R854_9CHLA   E=5e-09 s/c=0.46 id=16% cov=61%
------------------------ILNKPIGYIC-SNKRNKDSKIVLDLFDTVEERLFTVGRLDKDTSGLIIVTNDGHFANRVIHPSAN--IHKEYLVKTNEEVEAEHL----------------SALSSGTLVEKTFVRPIRVSKVRRGTLKITIAEGKKREIRLLMESAKLPVL-------------------------------------------
>UniRef50_Q1GFA6(123-260:422) Pseudouridine synthase n=3 Tax=Rhodobacteraceae RepID=Q1GFA6_SILST   E=6e-09 s/c=0.46 id=18% cov=61%
---------------------------KPNGLVTT-TSDEKGRKTIFDALPEDLPRVMTVGRLDLNSEGLLLLTNDGGV-KRQLELPSTGWLRR-YRVRINGRPQDHEF-----------DVLRKGVVIDGERFQPMTIS-LDRQQGANAWLTIGLREGKNREIRRAMEEVGYPV--------------------------------------------
>UniRef50_B8BYZ7(445-550:571) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BYZ7_THAPS  E=6e-09 s/c=0.59 id=48% cov=32%
-----------------------------------------------------------------------------------------------------------------------------------------------------TKVFLKPWTGRRHQLRVHLALVaGFPILGDVAYSKEETKQrvmTCERMCLHAHMLSI--PLLGEETKmFVAADPF
>UniRef50_Q2G8T2(93-228:270) Pseudouridine synthase n=5 Tax=Sphingomonadales RepID=Q2G8T2_NOVAD   E=7e-09 s/c=0.46 id=19% cov=61%
--------------------------HKPSGLITAerdPTGRPTIYTALRNALPQGTPRVMPVGRLDVNTEGLLLMTNDGELKRALELP--STGIPRTYRARTF-----------GDISQARLEELMEGIEIDGVRYG-SINANLERSAGRNKWIELTLTEGKNREVRRVLEHLG-----------------------------------------------
>UniRef50_B1XK09(5-158:223) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XK09_SYNP2  E=8e-09 s/c=0.41 id=22% cov=54%
------------------------------------------------------PDIYSVGRLDLDSEGLLLLTNDAPLKHYLCEPKFAHS--RTYWVQVENIPDgqALEQLRQGVMVQGKKTRPAIANLLTPEPTVPAREPPIRFRKNvPTAWLELTLTEGRNRQVRRMTAAVGHP---------------------------------------------
>UniRef50_Q9U190(1164-1408:1469) Possible RNA pseudouridylate synthase n=3 Tax=Leishmania RepID=Q9U190_LEIMA  E=8e-09 s/c=0.26 id=31% cov=67%
-------------------------------------------------------QQGLVNRVDVGTSGVVLVARTADAlHGAADAMIREHHMRKTYRALVQRWPPFSSsssssastvrydddnaaaaplfsvspflspmpsavvcapvyaaGATASSISRRSALPLSHGRqlqspgqpsadalaasragstlswsssvpvslsslehvhqqyatlhaALQDQRNAITRYRVLEYFASaGVAYVQVELCSGRRHQIRQHFAQLGFPLVGDARYhagvvaGHAGTTLGMRRAALHAYTV-------------------
>UniRef50_A1WE21(234-391:520) Pseudouridine synthase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WE21_VEREI  E=1e-08 s/c=0.39 id=28% cov=23%
----------------------VIAYHKPVGeVVSH--DDPHNRPTVFRRLPRLvQGKWQSVGRLDLNTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C9ZNY1(588-713:727) Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=C9ZNY1_TRYBG  E=1e-08 s/c=0.49 id=34% cov=42%
--------------------------------------------------------------------------------------------------------------------------------RETLKRATTLVRRWSYDEDlDESVVECVLLTGRTHQVRVHLASVGHPIVDDHKYiyhlsrntpftgnYRKEVKSRLPPypstiphvasncssvttqgIFLHAWRYTLQYKNSETPETLEAPLP-
>UniRef50_D0ND20(111-209:263) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND20_PHYIN  E=2e-08 s/c=0.62 id=31% cov=42%
-------------LRVVYECSILALVVKPVGIHV-KGRGKRTVEQALPLLLRkqhvdagdfELPLPHAVHRLDYRVGGLLLVAKTRKMEVKLSAQFERHSVAKQYRAILVGNV-------------------------------------------------------------------------------------------------------------------
>UniRef50_B1ZYI5(2-153:188) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1ZYI5_OPITP   E=2e-08 s/c=0.40 id=19% cov=68%
----------------------LCALHKPYGVLSQFTPEPGSRWRTLAEF-GLPPAVYPLGRLDADSEGLLLLSDEPGLNTRLLNPDQAH--RREYWVQVERVPTDAalAQLQRGVKIGDYATRPCAARRLDPAPTLPPRDPPIRaRKNVPDCWLALELIEGKNRQVRRMTAAIGHP---------------------------------------------
>UniRef50_B0B8U9(65-200:241) Pseudouridine synthase n=10 Tax=Chlamydiales RepID=B0B8U9_CHLT2   E=2e-08 s/c=0.45 id=33% cov=22%
-------------------------VHKPLGYLCSSERKFPGSKLVIDLLSHCPYRLFTVGRLDKETSGLILV--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B7L142(83-217:674) Pseudouridine synthase n=9 Tax=Alphaproteobacteria RepID=B7L142_METC4  E=3e-08 s/c=0.45 id=24% cov=23%
----------------------LWLLHKPRGVVTT-ARDPEGRPTVFDGLPEELPRVVAIGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001C337CA(66-197:254) ribosomal large subunit pseudouridine synthase B n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C337CA  E=6e-08 s/c=0.45 id=30% cov=23%
-----------------------ILVNKPVGIIC-SCKDSQNRSIVMDLLpsnLRKGMGIHPVGRLDMNSSGALLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q83IR6(65-198:290) Ribosomal large subunit pseudouridine synthase F n=90 Tax=Bacteria RepID=RLUF_SHIFL  E=1e-07 s/c=0.44 id=25% cov=23%
------------------EDLVLIALNKPVGIVSTTEDGE--RDNIVDFVN-HSKRVFPIGRLDKDSQGLI----------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A0NV51(164-298:520) Pseudouridine synthase n=2 Tax=cellular organisms RepID=A0NV51_9RHOB  E=1e-07 s/c=0.44 id=32% cov=21%
--------------------------HKPRGLVTT-NKDPEGRPTVFERLPDDLPRVLTVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C5CXG1(261-418:604) Pseudouridine synthase n=4 Tax=Comamonadaceae RepID=C5CXG1_VARPS   E=2e-07 s/c=0.37 id=19% cov=24%
----------------------VIAYHKPVGEVVTHDDPQNRPTVFRKLPRLQQGKWQSVGRLDLNTEGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3ESK0(80-218:616) Pseudouridine synthase n=4 Tax=Bacteria RepID=A3ESK0_9BACT   E=2e-07 s/c=0.42 id=24% cov=21%
-----------------------------------------------------------VGRLDIQSEGVLLLTNNGDLAQRILHP--RYEIPRTYLVKVQGVVKP-----------------------------------------------------------------------------------------------------------------
>UniRef50_A0Z9D8(40-180:229) Pseudouridine synthase, Rsu n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9D8_9GAMM  E=3e-07 s/c=0.41 id=22% cov=25%
------------------EQPRYIMLNKPPGMVS--ATCDEQHSTVLDLVSAPNAKSlHIVGRLDFNSTGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C1SPF0(59-193:229) Pseudouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPF0_9BACT  E=4e-07 s/c=0.42 id=22% cov=59%
------------------EDYFYWAFYKPKSVLTAYGDGH-GKDTLEIYPFLREKKPAYSGRLDYDSEGLIIFSNDGDFIRRLQRA--EEKVEKEYIV-----------TVNRVLKKGEMDDLRKGIVYEGIRY--RECIVEQHSHDRY---QVVLHEGKKRQIR------------------------------------------------------
>UniRef50_A1KUC7(65-228:230) Pseudouridine synthase n=29 Tax=Neisseriaceae RepID=A1KUC7_NEIMF   E=4e-07 s/c=0.35 id=22% cov=56%
-----------------------------------------------------------VGRLDADTTGVLLITNDGKLNHNLTSP--SRKIPKLYEV-----------TLKHPTGETLCETLKNGVLLHD--ENETVCAADAVLENPTTLL-LTITEGKYHQVKRMIAAVGNRV-----------------QHLH--RRRFAHLETenlkpGEWKFIDCP---
>UniRef50_B0S303(62-198:235) Pseudouridine synthase n=2 Tax=Finegoldia magna RepID=B0S303_FINM2   E=4e-07 s/c=0.42 id=27% cov=22%
------------------------VMNKRKGVTSH-SKDPMHKTVIDDMGELCVFDLNPVGRLDLDTTGLLII--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A0M7H0(119-258:295) Ribosomal large subunit pseudouridine synthase F n=4 Tax=Flavobacteriales RepID=A0M7H0_GRAFK  E=1e-06 s/c=0.40 id=16% cov=26%
------------------EKPEYILLNKPAGFFVTGNPEKGGKTVMELVARTTSAKVSPVGKLDNQAKGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B1KQS3(41-202:239) Pseudouridine synthase n=20 Tax=Gammaproteobacteria RepID=B1KQS3_SHEWM  E=2e-06 s/c=0.34 id=22% cov=63%
----------------VHENNHIrleggqrltarasryIMLHKPADTLS--SNVDGDHPSVFNFInLEHTSELHIAGRLDADTTGLLLITDDGRWSFNVFNP--KYHCEKVYRV---YLRDSIEGEIAGEIDAELKARFKQGLDLQ-GEQALTLPAKLEFVSPK--EVLLTITEGRYHQ--------------------------------------------------------
>UniRef50_A9MDW0(165-299:611) Pseudouridine synthase n=43 Tax=Rhizobiales RepID=A9MDW0_BRUC2   E=2e-06 s/c=0.41 id=32% cov=21%
--------------------------HKPAGLVTT-NRDPEGRPTVFEALPPEMPRVLSVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C7LZX4(63-196:254) Pseudouridine synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZX4_ACIFD  E=2e-06 s/c=0.41 id=22% cov=25%
------------------EQREYWLLNKPRGVVS-SVVDPEGRPTVRSLVAT-TSRVYPVGRLDVDSEGLLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D2VWU1(68-214:244) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VWU1_NAEGR   E=2e-06 s/c=0.37 id=19% cov=48%
------------------------------------------------------PTLGNVGRLDLDSCGLLIMTQDGDLHHRILSA----DVEKTYLV---EFVPPIESDVELNQMKELFFSGDLQLRSED----STLKPITNFEYINPSTISISIVEGKYHQVRRMFAA-------------------------------------------------
>UniRef50_A9KPL1(79-210:477) Pseudouridine synthase n=63 Tax=Bacteria RepID=A9KPL1_CLOPH   E=4e-06 s/c=0.41 id=21% cov=21%
----------------------LIAFHKPKGIVCT--TEKREPDNIIDYIK-YSQRIYPIGRLDKDSEGLI----------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C8P160(81-223:262) Pseudouridine synthase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P160_ERYRH  E=5e-06 s/c=0.37 id=25% cov=24%
-------------------DDEkvYIALNKPRGITCTTDGAIEGN---ISDFMNYPKMIFPIGRLDKDSSGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B2IHU4(151-288:528) Pseudouridine synthase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IHU4_BEII9  E=2e-05 s/c=0.38 id=25% cov=23%
----------------------LFLFHKPRGLVTT-NHDPEGRPTVFDYLHERHPDMPRVlsiGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6DF49(62-195:236) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DF49_9BACT  E=2e-05 s/c=0.38 id=25% cov=26%
-------------------------------------------------LLPDKGRLYTVGRLDKPSEGLIVLTNDGDLAKIMTHP--SFELEKKYRVTVKGRVSQ-----------------------------------------------------------------------------------------------------------------
>UniRef50_A3UFV9(82-212:354) Pseudouridine synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFV9_9RHOB  E=4e-05 s/c=0.38 id=30% cov=21%
--------------------------HKPVGLLTTHSD-PQGRDTVFQTLPQDMGRVISVGRLDLNSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B3L0N6(21-205:392) Putative uncharacterized protein n=3 Tax=Plasmodium RepID=B3L0N6_PLAKH  E=6e-05 s/c=0.27 id=26% cov=39%
--------------SVLYQDDDYLVVNKAYGV-STFGRAPQKEsiiKSLEELNLEGHESANVLYKLHNHVGGCLLICKNKF--------IKNHTYGNTFLALVYGQVENAQ---------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001854B13(4-71:80) hypothetical protein HpylH_14560 n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001854B13  E=7e-05 s/c=0.73 id=32% cov=27%
--------------------------------------------------------------------------------------------------------------------------------------------------------------GRTHQIRLHLSSINHRIVGEGLYGVIDENAreylQLKRennaplLMLHAASLEFE--FKGAIYKIASPMP-
>UniRef50_Q6AQ24(158-220:229) Related to ribosomal large subunit pseudouridine synthase B n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ24_DESPS  E=0.0001 s/c=0.78 id=23% cov=22%
-------------------------LNKPKGYVTTLSD-PQGRPVVTDLLHGINERVFPVGRLDFDTEGALLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q4FVR0(68-208:239) Pseudouridine synthase n=4 Tax=Moraxellaceae RepID=Q4FVR0_PSYA2   E=0.0007 s/c=0.33 id=19% cov=48%
--------------------------------------------------------LRIAGRLDVDTTGALLISDDGGWLHRVTSPKHEHA--KVY---ELTLADAMDSDAQANAIKEVAEGILLEGDHEETKPATLEFI-------DETHARLTLEQGKYHQVKRMMGYFG-----------------------------------------------
>UniRef50_B9Y836(75-290:307) Pseudouridine synthase n=3 Tax=Firmicutes RepID=B9Y836_9FIRM   E=7e-58 s/c=1.04 id=37% cov=95%
--------PQEMALNVVYEDHDVIVINKPKGLVVHPGPGNPDHTLVNGLLWHCHDlsgingvlRPGIVHRIDKDTSGLIVACKNDNAHQSLAKQLAEKTAGRQYYALVHGVINHEYGTIDAPIGRDEKDRQKMAVTEKNSRPAITHFKVVERF-DNYTLVSCRLETGRTHQIRVHMQYIGFPIVGDPKYSLRKT-LPTQGQMLHAYQLSFTHPSTGERMTFEAPLP-
>UniRef50_Q45826(87-299:316) Uncharacterized RNA pseudouridine synthase Caur_0901 n=5 Tax=Chloroflexi (class) RepID=Y901_CHLAA  E=4e-57 s/c=1.05 id=34% cov=95%
---------EPIPLDVVYEDADIAVINKPAGMVVHPAPGHPRGTLVNALLARYPDlaiggelRPGIVHRLDRDTSGLLVIARHDQAMRSLVDQQQARRMRKIYQALVIGRPPE-TGTIDAPIGRDPRDRLRMAVV-PDGRPARTHYRLLDTFGD-YSLLEVQLETGRTHQIRVHLRHLGYPIVGDPVYGPRRSHLHLSRQFLHAAYLGLVHPRSGRWQEFTAPLP-
>UniRef50_Q9JVB6(100-322:374) Ribosomal large subunit pseudouridine synthase D n=39 Tax=Proteobacteria RepID=RLUD_NEIMA  E=2e-55 s/c=0.97 id=37% cov=95%
--------PEPMALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHcpelsQIPRAGIVHRLDKETSGLMVVAKTLPAQNSLVWQLQERTVKRIYRAVANGIV-PFDGKIETQIGRDPHNRLKMAVVKFGGKPAVTHVKVLERYLAH-SYIECSLETGRTHQIRVHMREANHPLAGDPVYGNPRhpcgdtvkeaVKSLGARQALHAYRLSFTHPESGETVSFEAPIP-
>UniRef50_A9BMW0(120-336:356) Pseudouridine synthase n=10 Tax=Comamonadaceae RepID=A9BMW0_DELAS   E=5e-55 s/c=1.00 id=37% cov=95%
--------PEDMALDVVYEDEHLLVVNKPAGLVVHPAPGNWTGTLLNGLLGRDPkarevPRAGIVHRLDKDTSGLMVVARSRAAMDALVAMIAARDVSRQYLALAHKAWGPRKHREvDAPIGRDPRNRLRMAVVDlaqHAGKTARTDIDLLA-GNEEVSLVRCTLHTGRTHQIRVHMASLGHPLVADAVYGGKEAGGMA-RQALHAFRLAFTHPMTGQALVLRAPLP-
>UniRef50_Q2W2D5(259-494:505) Pseudouridine synthase n=39 Tax=Bacteria RepID=Q2W2D5_MAGSA   E=7e-55 s/c=0.91 id=35% cov=97%
-------EPQDIALTVVYEDEDLIVIDKPAGMVVHPAPGNPDETLVNALLAHCGeslagiggvKRPGIVHRIDKDTSGLLVAAKTDAAHRGLATQFAAHTLERAYWALVWGTPSPRQGEIEGNIGRNPNDRKKMAVVKSGGKPALTRYRVLKSFAGGaVSLVECRLATGRTHQIRVHMTTQGHPLVGDPVYGRIRGHKGvvlppevktaliqFPRQALHAYLLGFSHPTKGYDVRFESgmPLD-
>UniRef50_C4FWV7(66-298:309) Pseudouridine synthase n=2 Tax=Firmicutes RepID=C4FWV7_9FIRM   E=2e-54 s/c=0.92 id=35% cov=99%
LAVEEdsLPEPEAMDLDIIYEDEDILVINKPAGLVVHPSKGHLKGTLVNGLLHYlngnlstgsDFYRPGIVHRIDKDTSGLLVVAKHNAAHQALADQLLNHDMRRSYIALVHGQVKAPQGTIEAPLQRDPANRLRWTVAKE-GKYALTRFQVMENF-ENATLLDLELETGRTHQIRVHLEFIGHPLVGDPVYRKGLDHIKGSlvhdmtGQLLHAYALKLQHPRSGEWLEFKAPLP-
>UniRef50_Q82WZ5(105-322:344) Ribosomal large subunit pseudouridine synthase D n=2 Tax=Nitrosomonas RepID=RLUD_NITEU  E=3e-54 s/c=0.98 id=37% cov=95%
---------EAIPLKILFEDDHLIIIDKPAGLVVHPGNGNWHGTLLNALLNHapqlsQVPRAGIVHRLDKDTTGLLVVAKTIEAQFDLARQLQQRTVKRHYLALVLGKLEK-DGVVDAPIGRHPIHRTRMAVVQ-NGKPARTHYRVLEKFT-ASTLLHCSLETGRTHQIRVHLLSIGHPLAGDPVYGRTSPDPstadavvRLPRQALHAWQLELTHPHSGQILLWESPLP-
>UniRef50_A5WFS2(174-403:420) Pseudouridine synthase n=3 Tax=Psychrobacter RepID=A5WFS2_PSYWF   E=2e-53 s/c=0.91 id=34% cov=97%
------DQPEDIKLDIIYEDDSVIVINKPVGMVVHPGAGNWSGTLVNGLLYHypnqaHLPRAGLVHRIDKNTSGLLVIGKTKAAQLELQEQLKDKSVYRHYQCVVAGDAPSlaRQRTIDAPIGRHRTQRTKMTVT-STGKTAITHIMKITPLSDTYSLLDVRLETGRTHQIRVHLSHIGHPIIGDDIYGNRQQLRagltpeqrqaiqSFPRQALHAYKLGFIHPETGESIELTAPLP-
>UniRef50_C0QAZ3(77-295:313) RluD1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAZ3_DESAH  E=4e-52 s/c=0.94 id=37% cov=95%
---------ESISLDFLHEDQWIVVVNKPAGMVVHPGAGNSSGTLLNALLHHFPSltdthcdpplRGGIVHRLDKDTSGTIVVAKSKKAYEFLQKEFRFRRVEKRYIALATGIITETQGRITLPIGRHPIHRKRMAVNTERARPAETLWRVLGQMAGHT-LLDVGLKTGRTHQIRVHFRALGHPLAGDRVYGfRGKQSARAPRQMLHAGTLGFRHPWSGKRVEFTAPLP-
>UniRef50_A7HM17(74-297:314) Pseudouridine synthase n=2 Tax=Thermotogaceae RepID=A7HM17_FERNB   E=4e-52 s/c=0.92 id=37% cov=97%
--------PEDIPLDIIYEDRDILVINKQPGIITHPIPSHTSGTIVNGVLYHCKDlqgiggvlRPGIVHRLDKDTSGVMVIAKNDLAHQSLTKQFKDRLTEKLYICLVKGVPKRKEGDIEINIARNPVLRVKMTVTnSEYGKPALTHYKVVREFGDIAALVFAYPKTGRTHQIRVHMKYIGHPLMGDEVYGRAKEDeiFGIKRQMLHALSLSFYHPRTGEKVKFIAkiPQDF
>UniRef50_Q3AVX8(98-319:339) Pseudouridine synthase n=40 Tax=cellular organisms RepID=Q3AVX8_SYNS9  E=6e-52 s/c=0.92 id=34% cov=97%
-----YLKPQPMDLDVLFEDEHIIVLNKSAGLTVHPAPGNKDGTLVNGLLHHCPDlpgisgklRPGIVHRLDKDTSGCIVVAKSQEALVKLQVQIQKRVASREYFAVVHGVPDGDSGTIIGAVGRHPVDRKKYAVVsDESGRYARTHWTLIERFGD-YSLLRFKLDTGRTHQIRVHCAHINHPVVGDPTYSRcRKLPLDLPGQALHAVQLGLDHPITGERMVFEAPLP-
>UniRef50_B9JRD0(86-328:342) Pseudouridine synthase n=1 Tax=Agrobacterium vitis S4 RepID=B9JRD0_AGRVS  E=3e-51 s/c=0.84 id=35% cov=96%
---------EDIPLTVLYEDKDLIVLSKPAGLVVHPGAGNWTGTLVNALIHHCGdslsgiggvKRPGIVHRLDKETSGVMVVAKNDIAHRHLADQFADHGrsgpLERAYQALVWGRPRGLRGTIDAALGRagDRTKRTVKREDTDDAREAITHYQVMERYGEKpdatclASLVECRLETGRTHQIRVHMAHIGHPLIGDPEYGaafktkanllpdaAKAIVTNFHRQALHAYLLAFEHPTTGDVMHFAAPIP-
>UniRef50_B3DV48(87-301:325) Pseudouridine synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV48_METI4  E=5e-51 s/c=0.94 id=33% cov=95%
---------EEIALEILYEDEEILIVNKQRGMVVHPSCGHWSGTLVNSLLFHYGEslpgssllRPGIVHRLDKDTSGVMVIAKTERSLKSLLLQFSQRTVQKVYLCLCKNRFPYLRYSFEANIHRHASDRKKMAVHRLKGKTAETRFTLL-FASSQASFLKCEPVSGRTHQIRVHLSHLGFPIIGDPLYG-KGVRKYPFPLLLHAYALKIEHPRSGKKIEFMAPLP-
>UniRef50_C1A885(79-297:329) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A885_GEMAT  E=9e-51 s/c=0.92 id=32% cov=95%
---------EQIPLDVVYEDEHLLVVDKAAGMVVHPAPGNWTGTLVNALLGRGEPlaegggedRAGLVHRLDKDTSGLLVVAKSDAAHRTLSSALAARQVTRRYAAVCWGHLAEERITVEKPIARDPRDRTRMAIVQS-GKASRTDFTRLARF-DSVDLLRAHLHTGRTHQIRVHLASTGHPVVGDDTYGGGGGRRLAllppRRHFLHAAWLRFRHPISGDLIDLRSPLP-
>UniRef50_Q7UHX8(74-318:334) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UHX8_RHOBA  E=2e-50 s/c=0.82 id=38% cov=96%
--------PENIPLDILYEDDGLVVINKPAGMVVHPARGNWTGTLTSALAFRfqslsdvgGPTRPGIVHRLDRDTSGVIVVAKNNAVHLNLAAQWHDRLVQKEYTAITFGRLDRDRDWIHASIGRHPYQRDKQAIRegHATSKTASTFYEVVERHG-RVTRVDVRPKTGRTHQIRVHLAHIGCPILCDRLYGGhselsrsqirrlagtevatpgvkptpEGEEILLSRQALHAKALTFTNPQTGKEMTLTAPLP-
>UniRef50_C6WV38(86-308:368) Pseudouridine synthase n=3 Tax=Proteobacteria RepID=C6WV38_METML   E=2e-50 s/c=0.90 id=40% cov=93%
---------QDIPLDIVYEDDHILVVNKPAGMVVHPAAGNWDGTLLNALLfhapqLHDVPRAGIVHRLDKETSGLLVVAKTLNAQTHLVRQLQARTVKREYRAIVWGQL-WRNGVVDQPLGRDPRSRTKMAINRM-GKPAITRYEILERFSVQTYL-RCNLETGRTHQIRVHMQHLKAPLVGDPVYGFrgivpiramtqtlRDAVSQFHRQALHAIKLGLVHPATNEFMEWQ-----
>UniRef50_A8GQ59(64-304:329) Pseudouridine synthase n=15 Tax=Rickettsia RepID=A8GQ59_RICAH   E=3e-50 s/c=0.83 id=30% cov=98%
-----FKEPEElkiaavnIALDIIYEDDDLIVINKAAGMTVHPGAGHHDDTLVNALLYHTKNlsdigsaaRPGIVHRLDKDTTGLMVVAKNNKAHMLLANQIEQRQVIRKYKALVWGVINPLAGVIKNNIGRSRVERQKMSILKYGGKEAVTHYKTLELFYGGTiSMVECRLNTGRTHQIRVQLSHVKHSVVGDQTYGNNDRKiahsspalkaklIDFKRQALHSWYLSFTHPTSNKIMEFSCELP-
>UniRef50_C6J6E3(80-306:321) Pseudouridine synthase n=2 Tax=Bacillales RepID=C6J6E3_9BACL   E=9e-50 s/c=0.87 id=35% cov=95%
--------PEPIPFDIVYEDEALLIVNKAAGLIVHPTHGHYTG-TLANGVVYYWQekgekfRFRPVHRLDQETSGLIAIAKNAYVHQHISEQLIAGEVTKKYTALVHGCPAVPEGTIDGPIDRDPAEPHR-RIVTPSGYPSLTYYKVAEAYGDG-ARVELRLGTGRTHQIRVHMTSIGHPLIGDKFYGMPglaelpapareriaRLDAAIGRQALHASELGFRHPLTGEALTFKSELP-
>UniRef50_D0RPR1(62-310:325) Pseudouridine synthase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPR1_9RICK  E=1e-49 s/c=0.80 id=32% cov=96%
--------PKKMDLNIIFEDQDIIIIDKPIGMVVHPGAGNYEDTMVNGLLYHcknnlsgmnGEDRPGIVHRIDKDTSGLLVVAKNDQAHAFIAKQFEEHSIKRSYLVFVYGILRPLHGKIETLIGRNKTNRQKMSADVIRGKDAITNYETLEVFKGNkipdISLVKCILETGRTHQIRVHMSHKGNPILGDQTYGKKIKKirgidqefeeilKSLKRQALHAHTLGFIHPTTNEEVFFASELP-
>UniRef50_P65834(78-302:326) Ribosomal large subunit pseudouridine synthase D n=321 Tax=Gammaproteobacteria RepID=RLUD_ECOL6  E=1e-49 s/c=0.88 id=36% cov=95%
-------EPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALLHYYPpiadvPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTA-GGTVDEPISRHPTKRT-HMAVHPMGKPAVTHYRIMEHFRVHTRL-RLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPrppkgaseafisTLRKFDRQALHATMLRLYHPISGIEMEWHAPIP-
>UniRef50_D0KVM5(76-299:340) Pseudouridine synthase n=11 Tax=Proteobacteria RepID=D0KVM5_HALNC   E=3e-49 s/c=0.88 id=38% cov=95%
--------PQDIPLDIIYEDDAIIVLNKSPDIVVHPAAGNPDGTLVNALLFHDPslvsvPRAGVVHRLDKQTSGVMVVAKTLAAHKILVENLAARKIRREYDTVVMGHVVA-GGTVDAPIGRHPRDRQRQAVTA-TGKRAVTHYRVLQHYGEQT-WLRVQLETGRTHQIRVHMAHIRHPVIGDPVYGGRpripprastaliDVLRHFERQALHARYLTLAHPVTGTQMRFEAPMP-
>UniRef50_C8WW59(80-297:314) Pseudouridine synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW59_ALIAD  E=4e-49 s/c=0.90 id=35% cov=96%
----ELVPDDGVPFVVAYEDDDVIVVDKPRGVVVHPGAGHMRGTLVNGLLARGTPlctlagalRPGVVHRIDKDTSGLVVFAKSDRAYRALVEAFRAHDVEREYVAIAHGRMPHREGTIDMPIARDPADRQRMAVRQ-GGKRAVTHFEVLESFAK-YSYLRLRLETGRTHQIRVHLAAIGHPIAGDPVYGPRHT-LPIDGQALHARTLGFTHP-DGRRLRFESAVP-
>UniRef50_D0MK65(1-204:235) Pseudouridine synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MK65_RHOM4  E=5e-49 s/c=0.96 id=35% cov=93%
-------------LPILYEDDDLLAVHKPEGLAAIPERDPSRPSARRLLEAARGERLWVVHRLDKEASGVLLFARNAEAHRYMNTLFEQRQVRKVYRALVHGRLEPGQGQIRAPI--RMYGSGRMGVDPERGKPSETRYRVLEYLDEAYSLIEALPLTGRRHQIRVHCYHIGHPIVGDPRYGDRSVQQRYPRLMLHALSIRFRHP-NGQELEIVAPVP-
>UniRef50_C9M7B4(68-288:301) Pseudouridine synthase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7B4_9BACT  E=6e-49 s/c=0.89 id=33% cov=98%
---EESVVPQDVPFRTVYADDWLAVVEKLAGIAVHPGAGRKDGTLVNGLVKTFGPlpgaglRPGIVHRLDIGTSGLMVVARTPQAYLFLQREFSQRRVEKTYLALVHGWIPASQGTLDGPIGRSRYDRLKMAV-RADGRRAVTRYRTLWTRG-SLSLTACRIETGRTHQIRVHMASIGCYLDGDRLYGPKDVsrHFLEGRVFLHAWRLSFHHPSDGRTMNFRSPLP-
>UniRef50_C1AE05(264-476:476) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE05_GEMAT  E=8e-49 s/c=0.92 id=45% cov=95%
--------PNEPA--VVYEDDHLLVVNKPSGMLTVPGRGPTMQDCVMTRLRARYPDatgQMVVHRLDLDTSGLLLAAKDPITASALQRLFSLREIDKHYVAWLDGVVTDDHGHIHLPLRMDVDDRPRNIHDPVFGKPAHTEWQVMART-DGRTRVRFTPHTGRTHQLRVHAAHpdgLDAPIVGDRLYG-RTAPDEDERLQLHAERLAFVHPVSGAKVVVEQPAPF
>UniRef50_C0QV86(104-313:329) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QV86_BRAHW   E=8e-49 s/c=0.93 id=30% cov=93%
--------PENIDLDILYEDKYLLVINKPAGMSVHCSPSEMSGTLVNALLYKikdfdfvgNKERAGIIHRLDKDTSGLMIIGKNANIVSSIQEQFKNRTIKKIYHAIVVGVLKDNYIEINLPIGRHHVYRKKMTV-REDGKEALTHIKVLKRF-NSHTLIEINLKTGRTHQIRVHSSYKGFPVAGDKIYS--KSFSKYSGLMLVAKKIEFMHPITKELLDFE-----
>UniRef50_C1CWT3(70-296:321) Pseudouridine synthase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWT3_DEIDV  E=3e-48 s/c=0.85 id=35% cov=95%
---------EDLPLDVIYEDDYLIAVNKPPGMVTHPAPGVLSGTLVNALLGRMplpeqpdydseaGYRPGIVHRLDKDTSGVIVVAKTVGAHARLAAAFKDRETRKTYLAIAAGQWrADGPARVEAPIGRHPVQRQRMTVGGANPREAQTLFTPLAAHPDGHgrtlALVRAQPRTGRTHQIRVHLAHLGSPILGDAVYGRSSETML--RHALHAHFLSVPHPGTGRLLHLHAPAP-
>UniRef50_C4XFS9(77-296:315) Pseudouridine synthase n=2 Tax=Mycoplasma RepID=C4XFS9_MYCFE   E=4e-48 s/c=0.88 id=27% cov=95%
-------EPVNIPLDIKYEDDDLVIINKPSNLVVHPSPGHYNDTLVNGLLYHfknnlsnenGLLRPGIVHRIDKDTSGLLIIAKNNKMHNSLTDMLKRHEIERSYLAIVRGLIENPLTKINLPIARNTVDR-KMMSVHKEGKEAITFVHLLKHFyldKEPMSLVRCELKTGRTHQIRVHLSYIKHPVYGDPTYGKSVDEFN---QRLHAYKLKFIHPLTKKEICVYAPVP-
>UniRef50_Q1Q689(86-313:335) Similar to ribosomal large subunit pseudouridine synthase D n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q689_9BACT  E=5e-48 s/c=0.85 id=34% cov=94%
--------PEDIPLNIIYEDDYLMLINKPYDMVVHPAGGHPSGTLVNAVTFYCQNlsqingplKAGIVHRLDRDTSGVMLVIKSDAVHSHIAMQFEKRLVKKEYFAVVEGEVAFDSNEINMPIGRHRVDRQKMAVRRDTGKNATSVYEVIERFR-GYTLVKIMPKTGRTHQIRVHMQAIGHPVVADEMYSKynacfrsdllgkeraPDEGSIIERQALHAHRIEFFHPILNKQMAFQ-----
>UniRef50_Q49WX8(69-293:305) Pseudouridine synthase n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49WX8_STAS1  E=6e-48 s/c=0.85 id=31% cov=95%
--------PENLNLDIYYEDDDVAIVYKPKGMVVHPSAGHYTGTLVNGLMYQMKNlsgingeiRPGIVHRIDKDTSGLLMVAKNDVAHRSLVDQLVNKTVTRKYVALVHGKIPHDYGTVDAPIGRNKNDRQSMDVV-DDGKEAVTHFNVLEHF-NKYTLIECQLETGRTHQIRVHMKYIGYPLVGDPKYGPKKTLD-IGGQALHAGIIGFEHPVTHEYIE-KStalPEDF
>UniRef50_C2W5F3(72-292:307) Pseudouridine synthase n=4 Tax=Bacillus RepID=C2W5F3_BACCE   E=6e-48 s/c=0.87 id=30% cov=98%
-AQEEYgVQPEYGDLEVIFEDDHVLIVNKPAHMDTHPSNKGGTG-TLANLVAFHLQMQgvetkvRHIHRLDKDTTGGVVFAKHGIAGVIMDRLLMERNIKRTYLALVEGKVRKKQGIIDEAIGRDRHHATRRRVSQK-GDRAVTHYKIEKYFKKqDVTLVTLQLETGRTHQIRVHMSHSGHPLIGDVLYGGQAT--YMPYQALHAMRIHFLHPITKEEITVEAPLP-
>UniRef50_A6TAT3(42-263:263) Pseudouridine synthase n=57 Tax=Bacteria RepID=A6TAT3_KLEP7   E=7e-48 s/c=0.86 id=40% cov=97%
-------PPCREQITLLYQDEHLVLINKPAGLLSLSGKDPRNLDSVHHRLVQRYPGCTLVHRLDFGTSGLMVIARNKGINALLCQQFSQRTVDKVYTALLCGHLAEDEGIVEAAIAKDPARFPRMALCARHGKPARSRYRVIDRLYQaregeralALTRVTLTPETGRTHQLRIHCQLLGYPILGCDLYGGRElpGTEQAPRLMLHASELRFVHPVSHEPMHIQQASPF
>UniRef50_D1VS73(71-280:295) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VS73_9FIRM  E=9e-48 s/c=0.91 id=31% cov=93%
---------EKIDFNVIYEDEYIAVISKPQDLVVHIGAGNSSGTLVNGLLYKfknqlsdlDPLRPGIVHRLDKNTSGLMIIAKNNQAHINLVDQFKNSQIKKYYLAIVHGK-TPESGIIAEPIGRNPNDRKKMAVVYKNSKQAITKYKKLKEFQE-YSLLNINLLTGRTHQIRVHMAYIGYPVLGDIIYGRKNSLK-IDKQMLHSYKLIFNHPITNQKMEFT-----
>UniRef50_Q2NIN6(73-289:306) Pseudouridine synthase n=4 Tax=Candidatus Phytoplasma RepID=Q2NIN6_AYWBP  E=1e-47 s/c=0.88 id=31% cov=96%
----NLQTPQNLNLDIIYEDPYLAVINKPANLVVHPSLSFQKTTLVNGLLHQfntlshiDTQRPGIVHRLDKNTTGLLIVAKTNDVSDKLQIAFQQRKITKIYWAL-IEGFLEDKGIIKLPIGRNNHNRLKMQV-MPDGKTAVTHFKTLQRFS-HFSLMECNLETGRTHQLRAHFSFLKHPIVGDLLYDSSHHITPL-GQFLHSKILKFNHPITNQNLILEAPLP-
>UniRef50_Q8ZQ16(95-305:319) Ribosomal large subunit pseudouridine synthase C n=110 Tax=Gammaproteobacteria RepID=RLUC_SALTY  E=2e-47 s/c=0.91 id=40% cov=93%
---------------ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFlELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKTVQAPLLKNILQSGERIVrVSQEGKPSETRFKVEERYA-FATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDRefdqqltEAGTGLKRLFLHAAALKFTHPGTGEVMRIEAPMD-
>UniRef50_Q4FN11(77-311:326) Pseudouridine synthase n=4 Tax=Bacteria RepID=Q4FN11_PELUB   E=2e-47 s/c=0.81 id=32% cov=95%
--------PYNFKLQIVYEDDDLLIINKPAGIIMHPGAGNYDETIVNALMHYnkdslstigDELRPGIVHRIDKDTSGLIVIAKNNETHENLSHQFSEHTITRVYQLLIWGKLRPSSGKIDTFITRSSKNRQMMEVSNSKGKRAITNYKTIEIFENDktptLSLVECRLETGRTHQIRVHMTHMGNSIMGDGKYKKKYKKlknidtnlenliYKLDRQFLHAQTLGFIHPRTNEEMVFTS----
>UniRef50_C0ZCK6(79-291:302) Pseudouridine synthase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK6_BREBN  E=4e-47 s/c=0.89 id=37% cov=95%
-----LDPASEAP-EILYEDDHLLIVNKPVGLLLHPTERYHHV-TLDHLVSGHFFRTgleakvRHVHRLDQDTSGVVLYAKHPWASALLDEMLRERTIKRTYVAYVSGQMPKERGKINEPIGKDRNHGTRRRVT-PNGDPAITHYQVKERFQT-ATKVECQLETGRTHQIRVHFSHIGHPLLGDELYGGK--RELIKRQALHAAVLKFEHPFGGEVIEVTAPLP-
>UniRef50_C7QW59(343-551:551) Pseudouridine synthase n=5 Tax=Cyanobacteria RepID=C7QW59_CYAP0   E=4e-47 s/c=0.91 id=42% cov=93%
-------------IKVIYEDQWIIAIDKPSGLLSVPGRYFETFDSVLTRLQNSLPdaqELRTVHRLDQDTSGILLLARDRYTHRHLSQQFAQRKVEKIYEAILAGSVMMNEGVIQLPLWGDPNNRPYQKVDWELGKPSITQFKVI-TTQENLTRIQFIPLTGRTHQIRVHAvdtQGLGSVILGDYLYG---CNAGVSRLHLHARELKFEHPQQQKTVHLYLETPF
>UniRef50_Q2RQY9(96-303:330) Pseudouridine synthase n=3 Tax=Alphaproteobacteria RepID=Q2RQY9_RHORT  E=5e-47 s/c=0.91 id=41% cov=93%
---------------ILHEDAHLIVINKEAGLAVQGGTGtPHHLDGMLESLADGGETPRLVHRLDKDTSGVLVLARTQAAARALTSAFRSREALKVYWAIVVGRPPMLQGTIKGALAKVAGGRGeRMEINEEEGKRAVTDFRVVDQAAKACAWVELHPRTGRTHQLRVHCLEMGTPILGDGKYGGPgaflEGTELPKRMHLHARALALPHPAGG-VLEIIAPPP-
>UniRef50_Q5QZ45(94-302:315) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q5QZ45_IDILO  E=6e-47 s/c=0.90 id=36% cov=93%
---------------ILYEDDALMLINKPSGVAVHGGSGLQFGLIEGLRaLRPKEKSLELVHRIDRDTSGLLLVAKKRSVLRSLHEQLRNKEMNKQYLALVRGQWQKRVRSVEAPLKKNTLKSGERIVrVDAEGKASLTRFRIQQRYKEGT-LVEASPVTGRTHQIRVHALHAGHPIAKDPKYGDTDfdntmSRLGLNRLFLHAWQLRFLHPVTGKEVAFEAPLD-
>UniRef50_Q1DCE5(77-287:310) Pseudouridine synthase, RluA family n=2 Tax=Cystobacterineae RepID=Q1DCE5_MYXXD  E=8e-47 s/c=0.89 id=38% cov=95%
--------PPAPELRVLYEDADVIAVDKPAGVSAQPTEG-RVGDSLVDLVGAKLGRPaGLVHRLDRETSGVTVFGKTAEATSALAAEFREGRARKRYVAATGPGLPP-SGTVDLPLSKDPSRPGRWRATRaANGVPALTDFHTLS-SGPAFCVVELLPHTGRTHQLRAHLTALGAPILGDARYGGaaRAEGVEAPRCLLHAQALELGHPRTGKLLRIEAPVP-
>UniRef50_Q9KQH0(97-302:315) Ribosomal large subunit pseudouridine synthase C n=59 Tax=Proteobacteria RepID=RLUC_VIBCH  E=4e-46 s/c=0.90 id=36% cov=92%
---------------IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQARFlELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSI--VRVNPNGKPSETRFRILEKFAE-ATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRfdaytAQFGIERLFLHAANIQFVHPASEKKLEIHAPLE-
>UniRef50_A4J1I1(75-287:303) Pseudouridine synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1I1_DESRM  E=5e-46 s/c=0.87 id=33% cov=95%
-----YLPPEPLDLSIISEDEDIALVNKQPGMCVHPTLAYPSGTLANGLVYHWLennpaPTFHAVNRIDRNTSGLVLVAKNSYSAQKLFLQRKRKQLARSYVALVHGKIVQRNGYIDLPLEKCEGKTTK-RQISSTGQQALTRFEVLQYITD-CTLIRLMPETGRTHQIRVHLSHLGHPLVGDTLYGGSIAQ--IGRHCLHADKISFLHPRTGHPMSFQIPL--
>UniRef50_B7GQ28(71-288:320) Pseudouridine synthase, RluA family n=21 Tax=Bifidobacteriaceae RepID=B7GQ28_BIFLI  E=7e-46 s/c=0.85 id=30% cov=95%
-------EPIATDMAVVYEDDDVIVVDKPVGVAAHASVGWTGPTVLGSLRDRGVhiasygaaGREGIVSRLDVGTSGLMLVCKSDLAYTEMRRQFAEHEVKKTYHALVQGGLKENKATIEAPIGRAKVSDFRFCVT-PAGKPAVTHWDVLERFGHEATLVSVNLETGRTHQIRVHFSSIGHPLCGDPMYGANPVLSealGLDRQWLHAMKLEFRHPRTRVWTTVRS----
>UniRef50_A7H6D3(87-304:339) Pseudouridine synthase n=6 Tax=Cystobacterineae RepID=A7H6D3_ANADF   E=6e-45 s/c=0.83 id=31% cov=93%
---------------VLHEDADVLAVDKPAGLAAHPGTGISGATLVEMArahlgtpadLPPTEFKPSPAHRLDRDTSGVVLVAKNRKTMVRLTELFTDGaDVKKTYLALVKGKMPREAGTIDLPLAEHEQTARSKAARGVNLQEALTRWKVVSAMKE-ASLLAVTIETGRTHQIRRHLEAVGHPVLGDRRYGDFPTNRaarqrwGLRRMFLHAWRLELPHPTTGAPLRLEAPLP-
>UniRef50_D1PU24(218-421:421) Pseudouridine synthase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PU24_9BACT  E=7e-45 s/c=0.89 id=49% cov=91%
---------ETHELKIVYEDDTLCVVDKPAGMLSVPGKG--CRESVLDVMRRRCPDATgalVVHRLDMATSGLMVVAKTAEAYRELQRQFATRSVRKRYVAILSRQPREPKGEIALPLRPDLDDRPRQVVDSVYGKPALTHYEII-----DGCRVALYPRTGRTHQLRVHCAHrdgLDSPIKGDELYGRR-----AERLYLHAEWLAFRHPATGEEVEFTSVAPF
>UniRef50_Q0VQN9(98-303:317) Pseudouridine synthase n=2 Tax=Alcanivorax RepID=Q0VQN9_ALCBS   E=8e-45 s/c=0.88 id=33% cov=92%
----------------VYEDDQLFVFNKPAGLAVHGGSGVSLGLIEALRVMFPQERElELVHRLDRDTSGLIMVARRRSFLRKLQRLMQGGQIEKRYW-LLCQGFKGKERTLDAPLLKMMNGNERIVRVSREGKPSVTHFRLLERFAQ-AQLVEATLETGRTHQIRVHSQFGGFALLGDSKYGIAKGEALLaeigrRRLCLHARTLVFVHPNTGKRLTVTAPLD-
>UniRef50_A6LIG6(88-296:304) Pseudouridine synthase n=5 Tax=Bacteroidales RepID=A6LIG6_PARD8   E=8e-45 s/c=0.87 id=31% cov=92%
----------NPLLRIVWEDDDLIVINKREGLLSVSTDRIKERTAyriLSDYLKECDPRNkiFVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEAITQRTYVAVIEGRPEKDTDLIVSNLVEN-KHMQVYVTQDGDGKEAITRYRLLQTN-NRYSLVELDLETGRKNQIRAQMQSIGHPIAGDSKYGAETNPAG--RLMLHARRLCFIHPVTGEEMRFE-----
>UniRef50_C0E4Q3(83-296:310) Pseudouridine synthase n=2 Tax=Corynebacterium matruchotii RepID=C0E4Q3_9CORY  E=1e-44 s/c=0.85 id=36% cov=92%
-------------LEILYADEDLIAVDKPVGVAAHPTVGWDGPTVVGGLAAAGYristsgppERNGIVQRLDVGTSGVMVVAASERGYSVLKRAFKERTVSKTYHALVQGHMDPLAGTIEANIGRHPSSGWKFAVT-SDGKHAVTHYETLEAFV-AASLLEVHLETGRTHQIRVHMSALHHPCCGDPMYGADPQlsaRLGLNRQWLHAVKLGFYHPADGRWLEIESP---
>UniRef50_A9IIW7(94-310:324) Pseudouridine synthase n=5 Tax=Bordetella RepID=A9IIW7_BORPD   E=3e-44 s/c=0.83 id=33% cov=95%
--------PEPIAFAVVAESPDWIVVDKPAGLVTHPGAGNWSGTLLNGLLHRYPElarvaRAGIVHRLDKDTSGLMVVARNELAQTHLVRQLQARSMGREYIAL-AHGWLPVAGKVDRPIGRDARVPVRMSVERPiAPKPAITHYAPLRRGRapdGPVTEVACRLETGRTHQIRVHLASLGHPLLADTLYGGRLT-AGATRQMLHARALHFDDPGGGGPAAFRADPP-
>UniRef50_Q3YSF8(92-294:308) Pseudouridine synthase n=5 Tax=canis group RepID=Q3YSF8_EHRCJ   E=1e-43 s/c=0.88 id=30% cov=93%
--------------SILYEDDDVLIINKPAGVSVQGGTKVRISISDILDKIRDGESMRIVHRLDKDTSGILMLARNARASRLIMHEFKNRRVEKKYLALTQGIPKNDVGEINHSITKKKHNFYENIGTGNSiFQEAITSFFVLKKLPYDIGLLELKPKTGRKHQIRIHLSHIGCSIIGDKKYGKFCNHVLNDHLQLHAHFLSID--IGNKKLSFTAPMP-
>UniRef50_A4J9H9(92-307:320) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A4J9H9_DESRM   E=1e-43 s/c=0.82 id=30% cov=96%
----NYgVQPEKGAIEVLYEDDFLLVLNKPAHQLVHPT-GQTTRGTMANYLAYYLKQRnvvsaiRPVHRLDRETSGCVIFAKDSRSQFILEQQLKERTLKRTYWALVKGIVHPPSGTIDAPIGPHPSLANR-RAINEHGEQSITHYQTLRSFPE-ISLLKLNLDTGRTHQIRLHLAHLGYPIIGDRMYGVRS--PWINRQALHAYDVSFRHLKENHEIAVHAPLP-
>UniRef50_C0WQF4(72-285:297) Pseudouridine synthase n=3 Tax=Lactobacillus RepID=C0WQF4_LACBU   E=2e-43 s/c=0.83 id=34% cov=95%
------VPASDLPIQIVFEDEHFLVVNKLSGIASVPAH-NRANDSLVNRVKGYYQRNhyanqkiHIVTRLDKDTSGLVIFAKHHFAHSVLDKQLKDHQIKKTYLAIVEGTFSTTHFEIYLPIKRADGSLVKRQVGFP-GKMSITEAWTKQRLRQHT-LLKLQIHTGRTHQIRVHMTAIGHPLVGDWLYNP--EDKSFPRQALHCAGLRFFNPFAGHFVDCRAPLP-
>UniRef50_B1YJB1(80-287:293) Pseudouridine synthase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJB1_EXIS2  E=3e-43 s/c=0.85 id=35% cov=91%
-------------LDILFEDDWLLIVNKPPGMASIPSRLHPER-SLSNFVLGYYRQHqipyaiHIVNRLDRDTSGLVVFAKHSLAHHQLSKMQQNGLLDRRYVALIEGTIPAQ--TIDLPIGQ-TDHSFMERMVREDGQQAITHIltsEPITAFSRELSRLTIKLETGRTHQIRVHLAALGHPLVGDTMY---KGTPLIARQALHSASATFPHPGTGEVMTFVAPLP-
>UniRef50_Q0A8Q9(99-306:327) Pseudouridine synthase n=4 Tax=Ectothiorhodospiraceae RepID=Q0A8Q9_ALHEH  E=3e-43 s/c=0.85 id=35% cov=92%
---------------ILYEDDRLLVIDKPSGLAVHGGSGLAWGLIeVLRQARPSAPFLELVHRLDRATSGCLMVAKRRSALRELHEQLRTGAVHKRYLALLTGALGRGPIPVEAPLERRSGPAGGVRV-ASHGKLARTVFRAVARPG-GMTLAEADIATGRTHQIRVHAAHLGMPIAGDDRYGERAVNRrlrglGLKRLFLHAHRLELSAPGTGQPLSIEAPLP-
>UniRef50_C6D874(113-317:332) Pseudouridine synthase, RluA family n=2 Tax=Paenibacillus RepID=C6D874_PAESJ  E=3e-43 s/c=0.86 id=31% cov=92%
--------------EVLYEDDFSLVLNKPAGMPVHESHSGQTGTLDEAAARWLLEQgdplpVRHIHRLDDDTSGPVLYSKNDLAQWVLDEAMREKRIDRRYLAVVQGKVKKSSGTVNAPIGKDRHHSSRRRVT-PGGDLAITHYETIRAFSD-ATLVRLQLETGRTHQIRVHMSHLGHPLLGDKLYGGDT--RLLQHQALHGERLLFPHPWTGELVEAAAAKP-
>UniRef50_C5S931(122-334:346) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=C5S931_CHRVI  E=4e-43 s/c=0.83 id=33% cov=93%
---------------IIHEDERLLVIDKPSGLAVHGGSGLSYGLIESLRQLRPGRELELVHRLDRDTSGCLVVCKRRSALRELHALIREGGLDKRYLALILGELPRAELLVDAPLKKNVLSSGERlvRVDAQGGKEARTRFRRLKRFaidGQALTLVEAELITGRTHQIRVHAAHLGTPLAGDDKYGDEAANqrlkgYGLKRLFLHASALSFKLECMARPLRLECPLP-
>UniRef50_Q6MEZ4(32-234:243) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MEZ4_PARUW  E=4e-43 s/c=0.87 id=31% cov=93%
-------------IQILYEDADLAIIYKPSGLLSVATAFEKGETTHALLKAHYKPRKvFVVHRLDQDTSGVMVFAFNEKTCNGLKDLFEVHDISRSYTAIVEGQLLSPSGTWKSYLYEDSQYFVHETEDETYGRLAITHYRTLKTLKK-YSLVELTLETGRKNQIRVHCQSAGHPVVGDKKYGAHTN--PLKRLCLHAHLLAFKHPISRKIIRIESPIP-
>UniRef50_Q1AVY4(66-280:305) Pseudouridine synthase n=2 Tax=Rubrobacteridae RepID=Q1AVY4_RUBXD   E=7e-43 s/c=0.81 id=37% cov=96%
---EEGLEAEEIPVPILFEDEHIAVVDKPAGMVVHPGAGNRSGTLVNALLGRgiaggeDPERPGIVHRLDRDTSGLMVVAKGEPAYSRLVEMLAARRVRRVYRALVVGEGLPPSGTVDSPVGRDPENPALMAAGV--GRPAVTHFEVLGEAAGHTML-RVRLETGRTHQIRVHLSAIGYPVYADPLYGRA---VPGRRLWLHAERLSFEHPAEGRPLDFFSPVP-
>UniRef50_Q492Q1(94-304:338) Pseudouridine synthase n=2 Tax=Candidatus Blochmannia RepID=Q492Q1_BLOPB  E=8e-43 s/c=0.83 id=34% cov=93%
---------------IIYEDDYLLALNKPTGVAAHGGSGLKFGVIEGLRaLRPKAQFLELVHRLDRETSGVLLVAKRRTALVYLHEQLRLQNMKKEYLALVHGRWNVNLQIVSVPLFKKNTLLNSSRVVYidsENGKFSTTHFQIKEYFDNVATFLAIKPITGRTHQIRVHTQYASHPIVGDNRYGDYQSNtrfkrFGFNRLFLHASILRFIHPKTKKKFHIHAPL--
>UniRef50_Q1D9A6(75-295:316) Pseudouridine synthase n=2 Tax=Cystobacterineae RepID=Q1D9A6_MYXXD   E=1e-42 s/c=0.79 id=33% cov=95%
------VPDADFPLTVLHEDDSLVFVDKPAGRPSHPLQSGETG-TVANALVARYPECalasldaregGLCHRLDVETSGVVVAARTRDAWNAVREAFGSRAVDKRYLAL-VTGPLTDEGDIDLPLRHHPRHPDRVEPAPygaEDARDAVSKFTVLSRSGE-FSVVEVKILTGVLHQVRAHLAGIGAPIVGDSLYGGREA-PELGRFFLHARSLGLTHPQTRRNMTVHSPLP-
>UniRef50_C7LZI3(80-287:309) Pseudouridine synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZI3_ACIFD  E=2e-42 s/c=0.84 id=36% cov=91%
---------------VCYEDDDVAVIDKPAGLIVHRTHLRDVRPSVADWALERWPslralpgdplRRGLVHRLDRGTSGLMVIALSAGAYESLRRAVHDHEVERRYRALVVGVP-PQAARIEAPLGRDLRDLSRVAVV-SGGRDARTQLRVVWHGPD-TSLVELTLETGRTHQIRVHLSAIGHPIVGDEVYGVPYG--GLERPFLHATALAFEHPTRPGRVEVTAELP-
>UniRef50_Q211J3(263-475:501) Pseudouridine synthase n=81 Tax=Alphaproteobacteria RepID=Q211J3_RHOPB  E=2e-42 s/c=0.82 id=39% cov=93%
--------------MILYEDADVMVLNKPAGLAVQGGSGTTRHVDLMLEVMRDakGQKPRLVHRLDKETAGCLLIAKTRFAATALTGAFRERSARKVYWALVAGVPKPKQGRISTYLAKEESEDDTIMRIAEHGDEgashAVTYYAVVETSASKLAWVSLKPVTGRTHQLRAHMAHIGHAIVGDPKYFNIEnwqlPGGLQNRLHLLARRIVIPHPRGG-TIDVSAPLP-
>UniRef50_C8QW29(82-316:334) Pseudouridine synthase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QW29_9DELT  E=4e-42 s/c=0.74 id=31% cov=96%
-------PPVASHFSVVYEDDDLLVVNKPAPLPCHPG-GRYFRHTLWRLLQERCgvPKPLLVNRLDRETSGLVVVAKKRAAARDCARQWQEQQVEKRYLVLVEGEFPLGAQAVAGFLAPDPASLVRKKSRffpadqaAPAGAVSCATAFRLLALQGGISLLEARPLTGRCHQIRATLCSLGFPVVGDKIYGLDEElflRFLADRlssddrrrlrlprQALHSAGLKMRHPADHRPLEFTCPLP-
>UniRef50_B1VEM5(95-305:313) Pseudouridine synthase n=3 Tax=Corynebacterium RepID=B1VEM5_CORU7   E=4e-42 s/c=0.82 id=29% cov=93%
--------------HIVFEDDDLLIVNKPANIAVHVGSGVKAGVIEALRvLRPEDKELELAHRLDKETSGLLIVAKNSKMLRHLQSLLREGgeDIQRYYLAVAGGVLKKSGKQARRIDAPLRKTGAATVVDRRAGQQAETKLWVKKPWGRAGTLVEVQLLTGRKHQIRVHLQHLGHPIIGDSRYGDKAANqaaaeKGVRMLMLHASRLVIPLP-SGEELDVQAPMP-
>UniRef50_Q47417(116-338:376) tRNA pseudouridine synthase C n=252 Tax=cellular organisms RepID=TRUC_PECCC  E=6e-42 s/c=0.77 id=35% cov=94%
-------------LEIIYQDEHLVAVNKPSGWLVHRSWLDRKEKVVVMQTVRDqiGQHVYTVHRLDRPTSGVLLLALSSEVARALSQQFESHQMQKTYHAVVRGYVLDDGVIDYALTEELDKIADKFTNPDKAPQPAVTHYRSLaqaempvaigRYPTARYSLMELKPQTGRKHQLRRHMSHIHHPIIGDTAHGDLRHNRGmeshfsCGRLMLHASELQLNHPVSGQPLTLQARWD-
>UniRef50_C7TK72(71-276:278) Ribosomal large subunit 23S pseudouridine synthase D n=8 Tax=Lactobacillus RepID=C7TK72_LACRL  E=7e-42 s/c=0.83 id=33% cov=94%
--------PETPHLNTRYEDDDLLIVDKPAGMKTHPNQPGETGTLMNQAAAYLAPFPALItHRLDMATSGLLVIAKNPLAQAIINRQLTTKTMHRDYLAVVPSGIPE-KGTIQAPIGHDPDDKRK-RMIRADGAFAVTHYHRIAETAD-TATIELNLETGRTHQIRVHLASIGFPIIGDPLYAATET---ATRMQLHAFRVRLIRPLTIEPLTVTSPSPF
>UniRef50_Q03EW7(8-237:253) Pseudouridine synthase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EW7_PEDPA  E=8e-42 s/c=0.75 id=31% cov=94%
------LPPEpsnphvglsDVPIDVRYEDADYLIVNKPPFLPTVQSAAN-QKDTLVNRVKNYYVKNnyesrvvHVVTRLDQDTSGLVIFAKHRFAHTVMDQDLRQRKINKMYLTIVEGTFTNQHGIIETPIQRDPDSFIKRMVAPMGeGKPSLTEYWVEDTF-KNFTLLKVKLHSGRTHQIRVHFSSIGHPLVGDELYGGM-ANDILQRQALHCFSLTFKNVFTEKMIDIK-----
>UniRef50_Q0BUM2(113-340:366) Pseudouridine synthase n=12 Tax=Acetobacteraceae RepID=Q0BUM2_GRABC   E=1e-41 s/c=0.75 id=41% cov=96%
-----LDPIQQKELEswILYKDDHLIVLNKPSGLPSQGGPGItRHLDGLLDGLRFGRdDRPRLVHRLDRDTSGVIVIARSPGVAAKLAALFRTRETEKVYWAVVAGRPVPVEGRIDRPLLRqnDRNEPVVLADRKDRDKvTAITDYRTLDHAARKLAWLELRPLTGRMHQLRVHCAAMDAPILGDERYGSWRntdergvrntalVEGLSRRLHLHARRLSLPHPAGG-MLSVEA----
>UniRef50_D1B058(72-289:326) Pseudouridine synthase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B058_SULD5  E=1e-41 s/c=0.79 id=30% cov=93%
--------------PVLYEDEDILVINKPPFLTVHGAPSVK-EPTLVDWLQHRGislstisgeERHGIVHRIDKETSGALVIAKNNEAHVKLASQLEDKSMGRYYLAI-IDLPLKENVVVDLPIGRNPNHRLKMAVQREGRSAKSAFCKCSLSHDGKKELIAAKLFTGRTHQIRVHLSALSRHILGDSLYGFKSHNGTIPRVMLHAYILYLKHPRSQEMLYIHAPLwdDF
>UniRef50_D1AVV4(67-278:289) Pseudouridine synthase, RluA family n=2 Tax=Fusobacteriaceae RepID=D1AVV4_STRM9  E=1e-41 s/c=0.81 id=28% cov=93%
--------PIKMNLDIVYEDDDLLIVNKEPYLLTHPT-LKKVDKTLANGIVYHFIEkynknlvPRFISRLDMNTSGLIMIAKNSFSQSFIQSGKAN--VTKKYLALAENMFEKEEIIVEEKIYKDGDELAR--IIDDRGQYAKTKFKLIKNYPHlDISLIECELFTGRTHQIRVHLKHLGHPIIGDSLYNPDSIfNKIAKRQMLHSYKLSFTHPSSGKRIDVEIP---
>UniRef50_Q1RJX7(92-295:301) Ribosomal large subunit pseudouridine synthase C n=14 Tax=Rickettsia RepID=RLUC_RICBR  E=2e-41 s/c=0.84 id=31% cov=93%
----------------IYEDDNIIAINKPAGLATQGGSKINlSVDSALKYLNSQGADFKLVHRLDKETSGLLLIAKNYVSSVKLHDAFKEKLVEKTYLAVTYGKPIKDQGEVKTNIEKSKGSIPKITDINDnNGKLAITYYKLLKSLTNNLFLVEFIPITGRMHQLRLHAKLLGCPIFGDNKYGNDKLMPYSKYMFLHANNIVLSKKVFGKEVNLEAKLP-
>UniRef50_Q73K15(7-233:244) RNA pseudouridylate synthase family protein n=1 Tax=Treponema denticola RepID=Q73K15_TREDE  E=3e-41 s/c=0.75 id=33% cov=93%
--------------EILYEDKDILIVNKNAGLLVGADRWDSEAPRLDKILEELYKdkgerKIYPVHRLDKETSGLIIYALNAEAHKTLNDDFQNRKIEKIYHAVSAGIPQEENFKAEEKLRIDGDKLHRTVIDEKKGKESLTEFSLLKRFS-RFCLLEARPITGRTHQIRAHLKHLGLPILCDNLYGNGepvyisalkknwrgdkyEERPIISRLALHAHSLKFFHPISKEKIEISAdyPKD-
>UniRef50_B6WA53(67-282:299) Pseudouridine synthase n=2 Tax=Anaerococcus RepID=B6WA53_9FIRM   E=3e-41 s/c=0.79 id=29% cov=93%
---------EKMDLKIVYENKDYAIIDKDENVIVHPAGSIVSGTLVNGLLYHfgynnlshigGDDRPGIVHRLDKDTTGLMVIAKSNSSYKFLKNLFETRKIDKEYLAICNGIFKKKSGEIHTFMDRDPNNRRKMAVRNS-GRDAISKYEVLS-ENDGYSLVKIKILTGRTHQIRVHMTHINHPLLGDPVYGNVKHKFNLDHQLLHCHKLGFTD-KDGVYREFEA----
>UniRef50_D2R7R1(4-222:245) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7R1_9PLAN  E=3e-41 s/c=0.78 id=34% cov=91%
------------PFEILLEDSAVLVVNKPAGILTQA---PLGIDSLEWQIKRYLqsteksevPYLGVPHRLDRPVSGCICFAKNQKAARKISQQFEARLVQKTYWALVSGIVHPTRSTWVDHLKKLDGEPRTIVVDerDPEGKNAILHYELLET-REGRSLLAITLETGRTHQIRVQCGSRGFPLLGDRLYGSAEPFGPLaadERdqlIALHARTLAFRHPVTKEDLIFTA----
>UniRef50_A6GHA7(82-311:324) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHA7_9DELT  E=3e-41 s/c=0.74 id=29% cov=96%
--------PEAIPLTVVHEDASLLVLDKPAGMVVHAGPGHDSGTLVNAVLHHlqvhadalpvlpgnGPERPGVVHRLDKDTSGLIVFARGLRAQTVLAEQFRDHSIDRAYLGVVLGRPSFERRRLETTHGRDPADRRRFAPDQ-GTRRAVTTMEVLRPLGAHAALARFTLETGRTHQIRMHARMVGHPIFADPLYGRRPKHPALRRLadglgrhALHAALLGFAHPDGSGRLVLEAPLP-
>UniRef50_B1H0R5(88-285:296) Pseudouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0R5_UNCTG  E=4e-41 s/c=0.86 id=34% cov=88%
-----------------------VVVNKRSGIVVHPSYGHLSGTLLNALMGYsaGKYNPYLIHRLDKDTSGVIVFAKTEKAKISISKQLQKRVVKKIYYAAVKGVIAENRGIIKAPLGRSPKNRKLVSVNPLAKKVAITEFKVIER-KDDYTLLKVRIITGRTHQIRSHMKYINHPVIGDKQYGGPGTigLKRCERQMLHAHNITFTHPSTSKTVKFIA----
>UniRef50_A9GBV3(91-326:345) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GBV3_SORC5  E=4e-41 s/c=0.72 id=30% cov=93%
-------------IPVVYEDEHLLVIDKPAGLVVHPARGHASGTLVNGLLALpgfalapadprdpmGHVRPGIVHRLDRGTSGLLVVAKDEPTREALKDRFARHAIEREYAAIVAG--EARDATYDTLHGRHPTDRLRFTSWIRGGagapgshvaapRRAVTHVRVIERLGDAATVVACSLETGRTHQIRVHLAERGrTPVLGDPLYGKPPKKPavraiaeELGRQALHARVLGFIHPATQKPVRWESALP-
>UniRef50_Q8DBG5(2-224:245) tRNA pseudouridine synthase C n=54 Tax=Gammaproteobacteria RepID=TRUC_VIBVU  E=4e-41 s/c=0.76 id=33% cov=94%
-------------LEIVYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDqiGQHVFPLHRLDRPTSGVLVFALSSEVASQVMPMFAGQEMSKTYHAIVRGWIEEEGELDYALKVELDKIADKFASQEKEAQDAITLYKPLakvevpystsKFPTTRYGLMELKPKTGRKHQLRRHMAHLRHPIVGDTTHGDGKHNKLfreefdAPRLLLHASELRFVHPYTQQEVVIRAEVD-
>UniRef50_C3RIE2(74-289:294) Pseudouridine synthase n=4 Tax=Bacteria RepID=C3RIE2_9MOLU   E=6e-41 s/c=0.78 id=32% cov=96%
------NPNNNSSLDIIYEDRELIVINKPAGLLSMAGGNEKEKTayhLVGEYLKSKNKnaRVFIVHRLDKETSGVLLFAKNEIIKNKLQNNWNDIVYKRGYLAIIEGKLKKKHGTIKNHLDESKTQMV-YIANNGKGKLAITNYKVLKESRYN-SLIEVFLETGRKNQIRVHMQSLGHSIVGDKKYG--ATTNPIKRMGLHSHVFAFVHPDTKARMEFKAvvPEEF
>UniRef50_A4S1L0(8-233:243) Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S1L0_OSTLU  E=1e-40 s/c=0.74 id=34% cov=96%
---------DETPLDVVFENDEFLVVNKPPNLRFHPNHRFEGNSLLSRALHHmDGATPYIVHRLDMDTSGVAVFVKKQHLVANVAGQFQEKTAKKTYLAVSVGVVPPDCGdsfIVDAPIGDHGIVQEARTVDFSGeGKDARTTCEIIARATPPaavAALVRVTPLTGRTHQIRVHLAHAGLPIVSDALYGPHLRWKPYDdwggalsirRQALHAFNLELKHPETGESLTFQAKMP-
>UniRef50_Q0IBH1(25-219:220) Pseudouridine synthase n=11 Tax=Cyanobacteria RepID=Q0IBH1_SYNS3   E=1e-40 s/c=0.86 id=38% cov=89%
----------------------FLVVEKPSGLLSQPGLGDSQSDSLITRLQAVRPELRLVHRLDRDTSGLLLLARDPESLKVLGGLFAERKVHKFYAADVHGHPKSRSGAVRLPLARLSAHPPRYGPRR-DGRSCLTLWRCAQMGSDRSRLW-LAPRTGRSHQLRAHLAAIGLPIIGDPIYASSGLGSPGERLHLHALGLSFSDPFSGQRIRVRSSLPW
>UniRef50_A8Z5T0(96-323:337) Pseudouridine synthase n=3 Tax=Candidatus Sulcia muelleri RepID=A8Z5T0_SULMW  E=2e-40 s/c=0.74 id=30% cov=96%
--------PENLKINIFYEDEYVIIINKQSGLVVHPGKGNESMTLINGLHFYFLKKKNIynkipilVHRIDKGTSGLILVAKDKNILEKIYKQFYINHIKRKYITLVWGYIKNNKGTIICNIGRSLKNRIYMNVFPNGiyGKFSITHYKVLERF-KYVTLLKCTLETGRTHQIRVHLKYIGHPILNDKDYGGNHTFKekknikklfiNMKYQALHAYYIEYIHPIYRKKNYFICPIP-
>UniRef50_A4BJ00(4-226:249) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BJ00_9GAMM  E=3e-40 s/c=0.75 id=32% cov=92%
-------------LNIVYEDDVLLVVDKPSGLLMHPSWLDRREtDTLAGRAKAYLAQQsegakvHTVHRLDRPTSGLVVMCKDDHAAKALVEQFQEKTVNKRYWAICRGFAPVAETLDYPLIEEHDRIADKFADSDKPAQEAITEFRRLgitelaipvsRYPKMRLSWMECVPVTGRKHQIRRHLKHLRYPILGDTRHGCRHLNRAVEGsfgelfMGLRAVEMSFQHPVTNELMTF------
>UniRef50_A3Y8C6(99-307:322) Pseudouridine synthase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8C6_9GAMM  E=5e-40 s/c=0.79 id=33% cov=92%
---------------IVYEDAGLMVVNKPSGLAVHGGSGLNFGLVeVVRQLRSKEKSIELVHRLDRDTSGLIMISKKRSVLKQLHAALREKEgVQKTYQALVYGSWPKRKQQVNAPLLKNELKSGERIVkVHTEGKESLTRFKLLRQF-EGYSLVECEPVTGRTHQIRVHTLHAGYPIVGDDKYSPSEQNKeakglGFKRLCLHAAKLDIM--LNDQRILVEVPID-
>UniRef50_C6CW89(93-296:322) Pseudouridine synthase n=2 Tax=Bacteria RepID=C6CW89_PAESJ   E=7e-40 s/c=0.81 id=33% cov=90%
-------------LTILHEDEHVIVASKEAGLLTIASDKETDMTAyrqLMAYVRESDPknRIFIVHRLDRDTSGVLMFAKSEAVQQKLQEEWQTIVKERSYVALVEGEVKRQEGTISSWLKETKTLRMYSSPHPNDGQHAVTHYKLLQ-AGKVFSLVEVHLETGRKNQIRVHMQDIGHPIAGDKKYGS--TTKPIGRLGLHARVLAFEHPVTGKLLKF------
>UniRef50_C4KBT4(2-247:648) Transaldolase n=2 Tax=Proteobacteria RepID=C4KBT4_THASP   E=9e-40 s/c=0.67 id=33% cov=95%
-------------LEILYRDDWLVAIHKPSGLLVHRSPIAAHEERFAVQLLRDqlGRRVYPAHRLDRGTSGVLLFALDREVARTLAQRFEAQAVDKRYLAVVRGHPPEHGVIEHALVRRldavevrsgkgagardalpeDVDDSDSPEAAEPVAQPARTRFRRLatvelphavdRYPSSRYALVELLPETGRRHQLRRHLKHIAHPIIGDATYGKGRHNRlfqalfGSHRLLLACTRLALAHPVTERPLEIVAPVaeDF
>UniRef50_A0L7F8(16-219:255) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=A0L7F8_MAGSM   E=1e-39 s/c=0.81 id=31% cov=92%
----------------LYRDGLLLIINKPAGIPVHAGPGGGaNLEALFGGLRFGLPKaPALAHRLDRDTSGCLVLGRHAKALSKLGKLFSQGKVQKTYWAVVQGGPPQAQGSMDFPLYKISTaqQGWRMVVDPEQGKSSLTLYRVLGRSATH-SWLELTPKTGRTHQIRVHCAHVGLPIEGDLQYGAAPSEPQLT-LHLHARQIILPISASKAPINVSAPPP-
>UniRef50_C5TPY8(28-249:264) Pseudouridine synthase n=6 Tax=Proteobacteria RepID=C5TPY8_NEIFL   E=2e-39 s/c=0.74 id=34% cov=93%
-------------LDIIHRDSRTIAVNKPAGMLVHRSWLDKHETRFAVQTLRDqiGQHVYPVHRLDRPTSGVLLFALDTEAARLLTQQFENKTIEKTYWAIVRGYLPSDGLIDYA--LKYMPDKIAEAQTEATLQEAQTAYRClaqtelpfqsaLRYPTSRYSWAELTPYTGRKHQLRRHMKHIFHPIVGDTNYGDLRQNHavaehiGTQRLMLHARSLSFQSIEDGSRITVNAPTD-
>UniRef50_C9RKF9(142-359:386) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKF9_FIBSS  E=3e-39 s/c=0.75 id=31% cov=93%
-------------LDLVVQTEDYVIVNKPSGLASQPGSGTRPGESLVEYLWEWGrnegldFKPTIAHRLDQETSGLIIAALHGDTLRDFTRMIREHVVDKFYFALVKGNLKKDRGTISESLLRTDSAKGSKMLVgqdDENAQKAITHYRVKQHY-EGYDLVKIKLETGRMHQIRAHFASIGHPLLGDTRYGDFALNRevkklfGLNRLFLHSCRLEFD--WQGEHKVFDCPLP-
>UniRef50_C6VVP1(3-213:228) Pseudouridine synthase n=4 Tax=Bacteroidetes RepID=C6VVP1_DYAFD   E=4e-39 s/c=0.77 id=34% cov=93%
------------PLEILYRSDDLVAINKPNGLLVHRSPIASDADVFAVQLLRDQlsQKVYPAHRLDRKTSGVLLFALNENVNSEMQGKFMEGEITKTYHAIVRGH-TADRGEIDYPLKRDDGVTQDAVTHFETLARAEVPFALGKHATSRYSLVQLNPLTGRMHQLRKHMAHIMHPIIGDRPHGCNKQNRFFKeelgmiQMMLHAVSVEFVHPVSGQHVTIVAP---
>UniRef50_C1TRW2(82-285:305) Pseudouridine synthase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRW2_9BACT  E=8e-39 s/c=0.79 id=35% cov=90%
----------------VYRDESLWVVSKPAGLLSQPDKKGGDSVVTRAFLPGSSFQPQAVNRLDRNTSGIMVLALTGESLRDLSSRWRDGEMEKVYLALVVGDLPE-EGSIDAPLSKDGSSNKVF--VDSKGQSSLTLYRRLA-SGGGLSLCLVTLITGRSHQIRVHMSHIGHPVLGDVKYGDRALNgvKGAKRPMLHAFSVSFPD-MSGDlsslsSKTFRTPMP-
>UniRef50_B5JHH9(81-312:324) Pseudouridine synthase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH9_9BACT  E=1e-38 s/c=0.69 id=35% cov=96%
-------EPKIPDAAIVYFDEHIVVVNKAAGLMTVPHPESDETETL-DRLVNDYLRIRdpdaktnraslgVVHRIDKDTSGLVVFARTFLAKRALSEQFRAHSIERRYLAIVHGELKAQSIRTHlvretgDGLRGSAPKGATNSEGEELGRLAITHVDVVERLA-GATLVSCRIETGRTHQIRIHLSEIGHPIVGEKVYirGFEGELIPANRAMLHAAELGFIHPGSGEAVSWqeEASKDF
>UniRef50_D1ASB1(91-286:299) Pseudouridine synthase n=1 Tax=Anaplasma centrale str. Israel RepID=D1ASB1_ANACI  E=2e-38 s/c=0.82 id=35% cov=89%
---------------ILYEDQNVIAINKPAGVSVQGGSKVGVSIGDLLDKIRPGGCCRIVHRLDKDTSGVLVLARDLDVARCLAREFRERRVQKEYIAITKGVPHSASGEVNTPIFYKVQSATGERMLEKDAKTFFSVTRVL----GNFAVVLLRPVTGRKHQLRIHMSQIGCPIVGDSKYCKCGPVEKET-LHLHASLLTFE--LMGRKLSISA----
>UniRef50_A6DHD2(87-319:328) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHD2_9BACT  E=2e-38 s/c=0.69 id=26% cov=96%
-------PDIDRDFKVVYEDDDILMVEKTGDLPVHPA-GSFFKNTLWYMLVKQFGNVHIMNRLDRETSGLVLIARHHKAASVLGKQFERRQVGKEYDVLVEGLVSWDQYDALGYMGPAVSSKIRKKFSFTEAEDwqdygkhsARTEFSVLRRSHE-LSHLHCRLHTGRTHQIRATLLSLGFPLVGDKIYGLDEQFFLsfidgalteqdyqkmrLRRQALHCSLMSFTHPMSGEDVVFESSLP-
>UniRef50_A3DC38(9-220:231) Ribosomal large subunit pseudouridine synthase D n=9 Tax=Firmicutes RepID=A3DC38_CLOTH  E=3e-38 s/c=0.75 id=30% cov=93%
-------------IDIIFEDNHLLVVKKPVNIPTQKDKSNDSdmLTLLKEDIKKRYNKPgnvylGLVHRLDRPVGGVMVFAKTSKAASRLSDQVRTRQFKKVYLAVVHGILDKLEGRLENYLLKDTRNNTVSVVkeDTPGGKLAVLDYKV-EGIYNGFSLVKVSLHTGRPHQIRVQLANIGHPLYGDQKYGHG-VNKPGQQIALWSSEIAFVHPVLKQEMIFSCEPP-
>UniRef50_C1ZMP6(5-218:246) Pseudouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMP6_PLALI  E=5e-38 s/c=0.74 id=36% cov=93%
--------------HILFEDNHCLVVEKPAGVLTMGdeTGDENMVQLAMDDLKIRHQKPgnvyvGLVHRLDRPVSGVLLLAKTSKAASRLSAQFREREPEKVYLAIVEGQLNPAAGEIVDWLIKDqeRNHTRVTSPQTPGAKQAKLRYRQLETLVTPegiRTLVEVQPMTGRSHQIRVQLAHAGASILGDLRYGSKT--PLGKMIALHARSLTFEHPVQKQPLTIYAPLP-
>UniRef50_A1U2H1(4-223:245) Pseudouridine synthase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2H1_MARAV  E=7e-38 s/c=0.72 id=32% cov=92%
------------PLTEIYRDDWLLAVHKPAGLLVHRSPIDKHETEFAlqyARAMNGGEHVYPVHRLDRPTSGVLLFARDPETARALGLAMMAGAVSKTYLA-MVRGWAPEQGVIDHPL-REEPEDRRLKGQEQPVREALTRYRRLattelpvaieRYPTSRYSLVELKPETGRKHQLRRHMKHINHPIIGDANHGRGRHNRYFaerfgqGRLMLAATELRLRHPVTDEPLCLKA----
>UniRef50_Q5FSR8(44-247:265) Pseudouridine synthase n=1 Tax=Gluconobacter oxydans RepID=Q5FSR8_GLUOX  E=8e-38 s/c=0.77 id=33% cov=92%
-------------IPVLLETPRFLILYKPAGLAVHPGP--STQDSVETRLLPHpRGGPWLAHRLDADTSGCLLVARRKTALIEAQKAFQERQAHKLYWAVVVGDLPQDSGEIDAPLLRQSDASGWRMVVDAKGDEARTRWRVLGR-SKGLCWVELELLTGRTHQARIHCAELGTPILGDPVYGMPAPDgSALPGLHLLARSLELSLPSD--TLSAQAPPP-
>UniRef50_Q6MM51(2-214:231) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM51_BDEBA  E=1e-37 s/c=0.74 id=27% cov=93%
-------------IEILFEDEFFLAAAKPAGMPSQATvdkSRQDFFTALKNQLRNERGDAFylaLHHRLDRDTSGVMIFAKTKEANEPLADLFKTHKIQKTYLCLTKRTQKAADAWEVDNHLVEMKDtklkKTKMVRTQSGGDRAYTKFRKLEVFPE-ALLIEAQPLTGRMHQIRVHLADRGMGIYGDDIYQAPK-NPVAPRLMLHAHALEFTHPFTKEFVRIECAVP-
>UniRef50_Q04HA3(74-295:302) Pseudouridine synthase n=2 Tax=Oenococcus oeni RepID=Q04HA3_OENOB   E=1e-37 s/c=0.71 id=31% cov=96%
---QNYLPNNDRRLRILSEKEDYLLVDKPAGMKMHPHSPNE-TDTLLNYVEAQLKGHlsrscpahaFMVHRIDRDTSGVVIIAKNPLAVGILDQLLAKKRIKRTYLAWVSGNLENKKGSIDQAIAVDPINPYK-RIVDQAGQKAVTHWTKIHTVYQNT-LVRVSLETGRTHQIRVHFAAIGHPIVGDHLYNG----LAYSRLLLHSATIEIPELFSESRqshtITTAIPKDF
>UniRef50_A4CLQ5(8-222:236) Pseudouridine synthase n=16 Tax=Bacteria RepID=A4CLQ5_9FLAO   E=1e-37 s/c=0.73 id=30% cov=93%
-------------LMVLYEDNHLIAVSKRAGDIVQGDKTGDTplPETVKDYIAHKYQKPgkvflGVVHRLDRPTTGVIVFARTSKALSRMNRLFAEGGTRKTYWALVGTPPPETAGRLVHWLERNQKQNKSYARAKEvpGSKQAILNYRLLGSL-DRYHLLEIDLETGRHHQIRAQLAAIGSPIKGDLKYGFPRSN-PDGGIHLHARRLEFIHPVRQDPVSILAPLP-
>UniRef50_B4WMC0(75-324:328) Pseudouridine synthase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMC0_9SYNE  E=2e-37 s/c=0.63 id=30% cov=96%
-------PAVPLDFDVLYEDEDLWVINKPAGLPVLPSGGFlEHTLLYQLRVRYRDCQSAPVHRLGRGTSGAMLIAKSHIAKVQLSEQFRKRsanlssnttpntastcTLGKTYRALIAPTTPDQlrdRFICTYPIGKLPHTRlgyiyghLRDAHSHEktigpiNSMVSRSEGSVLRRRA-HSTLVEITIQTGRPHQIRIHLAAAGYPLLGDPLYSAGGVPDPHGyalpgdcGYHLHAHRLQFAHPRTGQSIAITAPPP-
>UniRef50_A9B0U7(57-286:312) Pseudouridine synthase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0U7_HERA2  E=4e-37 s/c=0.68 id=27% cov=98%
-----YANPVVTPADILFEDEWILVLNKPAAWYSVATPWDTFGHLEGALQRFFLERdgeavpFHLVHRLDHGTSGALIVSKNPSLNSRFQRMFNEGRVQKTYLALCSGLPDWTKLEVVTGHSRGEFGLWSVYPAAMIDQLYGPKDRRVRRAHTSFTVQAVgnaaallaaRLHTGRTHQIRLHAKHIGHPLVGDQRYGGvtQFGNLSIPDQLLHAAWLQFPHPRYGSMLELIAPVP-
>UniRef50_C6XFC8(102-312:346) Ribosomal large subunit pseudouridine synthase C n=5 Tax=Rhizobiaceae RepID=C6XFC8_LIBAP  E=5e-37 s/c=0.74 id=32% cov=92%
----------------LYEDSKIYVFNKPAGISVQGGSGIAYHIDgfLKSWVDSKGQKPRLTHRLDQETSGILVVARTRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVvkqnEKGANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKYcANFKGNFTSPiqnKLYLHARYMDLPHPEGGR-LQITAPLP-
>UniRef50_B2GFH2(92-311:326) Putative pseudouridine synthase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GFH2_KOCRD  E=9e-37 s/c=0.70 id=30% cov=96%
------VPDEDAPpvtLDVLHEDEWIMAVDKPHGLCSTPkGENVRRSVVVAARCQFDNDEISALHRLDRSTGGVLLLCKRAEDRSAFHRLFQERTVRKTYWAVAGVNERVGEQTVRVESRIRKIQGVVQAFEEPGEVNAVTDVRRVETFTDAdgtWGLYEIAPLTGRTHQIRVHMTSLGLPLRGDKLYPQPRQdfdvEDPENPLQLIARSIEFVHPVTGRAVRIDS----
>UniRef50_A6Q113(64-290:299) Pseudouridine synthase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q113_NITSB  E=1e-36 s/c=0.68 id=30% cov=93%
-------------LKPIFETKDFVLYDKPSGIMVHPRNRNTHYTLIDEIRYRYGPQANIVHRIDKETSGLVLASTNKEAEKALKQMFEHKQIQKRYLALVRGNIEKQLVIEEPiALNRDYSKIKLKVKIDPSGKYAKTIINPLKQFG-SFTLVEAIPITGRQHQIRIHLFHVKHPILGDPIYGPSTNESiryldglmdeeerlvvtGATRLMLHAYAVEFTYNDT--KYKIVSKKDF
>UniRef50_A8SAJ4(75-295:303) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAJ4_9FIRM  E=2e-36 s/c=0.70 id=27% cov=93%
-------PQPEIPVKVVYEDAFAVVLEKPPQLAVHPTLNYPGGTLANGYaawaaAHGHSPVFRPVNRIDKDTSGLVLAAKNAYAA-----PLLAGGVTKLYYAIAQGALPLGEGAIDAPIGR-RGDSIIGRCVTPEGKPSRTEYTIIK-EENGLSLAACVPVTGRTHQIRVHFASIGHPLAGDDLYGGSRER--IARQALHCARQSFavpvytplpdgirvEMPLQLRTVTVESPLP-
>UniRef50_Q2Q0E2(75-281:294) Putative RNA pseudouridylate synthase n=1 Tax=uncultured organism HF10_3D09 RepID=Q2Q0E2_9ZZZZ  E=2e-36 s/c=0.74 id=34% cov=92%
---------ETHSLDIIFEDDAILVVEKPAGLLSVATDRLE-VDTLHNRCVEYCrelkkkAWCFIVHRLDKATSGLMVFAKTEDVKRDLQEQFAERLVHRHYVALVEGVAEPGQAIQHLVEDRNLRVFVSDKKT-KTSKHAITTWDILE-KGDESTLLSVVIETGRRHQIRVAMAENGTPVMGDTMHG--ATTNLHGRICLHAVALEFLHPLTDDPIRFES----
>UniRef50_A9GHW4(113-337:356) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GHW4_SORC5  E=3e-36 s/c=0.68 id=32% cov=93%
---------------VVYADASVVVVNKPAGVSTIPYGDEapaEQAATLDALVREVLARRdrlrgraplGVVQRLDKGTSGLLVFARTLAAKKHLAQQLRVRAMHRQYLALAHGAVPRGTYRSYLVEDRGDGLRGSARDGRREGQLAVTHVEPIEVlrgpqegaGAGGVTLVACRLETGRTHQIRIHLAEAGHPLVGETVYvrDYRGTKVPAARLMLHAAELGFDHPADDRPMRFQAPPP-
>UniRef50_Q7VI26(85-310:351) Ribosomal pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI26_HELHP  E=7e-36 s/c=0.67 id=25% cov=95%
---------ERFSIDIVYQDEDVLIINKPPHLVIHHAPSVKEPTLVdwlklnahILYTLSGEERYGIIHRLDKQTSGALAIAKSNLAYTTLTKELKSRQMGRYYLAIIDTPLKDNQQVQ-CFMGRNPHNRLKMSKIHirsnspipKGVRDSKSSFIKIATSDNGaFELIAIKLHTGRTHQIRAHLESLSRHILGDTLYGYKpqaKTHYYQDRILLHAYILYFIHPKTQQNCTFKAP---
>UniRef50_C0QYU1(88-328:345) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0QYU1_BRAHW   E=1e-35 s/c=0.63 id=24% cov=97%
------KEPEvDKNVTIVYDDGDLIIANKPANLPVIPSGKYYHNTLHTIVKNMLNSNINMLNRIDRETSGCVVLSRSSKSASNFCAMLAGRKVngkqykrnsiKKTYIAvIENAKDIEDKFTVEGYMLESGHEYYRrfqtlHKENVEGSKYSKTSFKTIKRIGD-YAVVMARLYTGRMHQIRVHLYSKGFFMVGDKIYGKYGpkvfddfiekgiiPEGFFNRQALHAYSLKFNHPITDEIIKVKAPLP-
>UniRef50_UPI000050FD43(95-324:332) ribosomal pseudouridine synthase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FD43  E=1e-35 s/c=0.66 id=30% cov=93%
-------------ISVVFEDDDLLVVDKPHFLASTPnGRFVRECVVTRARLDFDQPDLVAIHRLDRVTAGLLILSKRPETRGRYQRLFQDRLVTKTYRALAAMPPadlelplvkesrlvKPRGGRQVLEVEGEPNAFSKISLLGERTPPSPrwsdaTEPPPRRSVGECPSIgeYQLEPLTGKTHQLRVHMNSLGLPILGDPVYPvdrAPDPYDFSSPLQLLAASIGFDDPLTGRPRRFES----
>UniRef50_Q013B9(159-454:472) Pseudouridine synthase, RluD (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013B9_OSTTA  E=1e-35 s/c=0.51 id=33% cov=95%
---------DDAPLDVVHEDDEFLVVNKPPNLRFHPNHRFE-GNSLLSRALHHTKGetPYIVHRLDMDTSGVAVFVKKQSLVSDVARQFHEKTARKTYLAISVGVTPPGCGdgfVVDAPIGDHGVVKEARNVDFSGeGKEARTVCEVISRKETAlfdisdetvaatttpkgvsatsetndsspsatAALVLVKPMTGRTHQIRVHLAHAGLPIVSDALYGPHirwgaqsadenekltwsasqlaacssenptqmhqmtppdecdsphpsgvwGGSLSIGRQALHAYKLELVHPVTGQMLAWQAEMP-
>UniRef50_Q6MA84(5-215:219) Pseudouridine synthase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MA84_PARUW  E=2e-35 s/c=0.72 id=32% cov=93%
-------------ISIVYEDNHLFVLNKPAGLLTQPSGTAH--DSLESQAKAYLKIVYqkpgnvfleAVHRLDKPVSGIVVFGKTSKALTRLNASVRAKQTKKIYYAWVDSVPVDEQKTLENFLIHNDFQAQVVSSKHPQAKLAKLTYRVIERKSVG-ALLEIKLETGRYHQIRAQLAHLGCPIRGDIRYGSQYPFTPHA-IALHHESLEISHPIHQETMLFQTALPF
>UniRef50_A4A0R6(27-235:242) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0R6_9PLAN  E=3e-35 s/c=0.72 id=30% cov=92%
---------------VLYEDNHLLAISKPALLATMGAQEGEPSAAqwAKDYLKRTYNKPgnvyvGIVSRIDAHVTGVLLFARTSKAASRLSEQFRDRSTVKEYAALIPAGPKIRNGELVDWIRKEDRLHRMVIAAEGTADADRAEMEILEqQRRPNCQMLHLRLITGRKHQIRLQLASRGAPILGDKKYGS--TDRYSPGIALHAHRLVFTHPTLKTMVTIEAPLP-
>UniRef50_Q7UWB9(20-232:232) Pseudouridine synthase n=1 Tax=Rhodopirellula baltica RepID=Q7UWB9_RHOBA  E=5e-35 s/c=0.70 id=35% cov=92%
-------------IEILWQCHACVVVNKPVGLPTTS---PKGTDSLESCLREQFAQAGNpvsyltaVHRLDRPVSGLVLIALRKKAARLLSEQFRLRHVQKKYIAMVQGNALEACKQepWHDTIAKltDEARVEIVGLDSTDGRQAETKVSFLEYDSEsDTSRIELRPVTGRMHQLRIQSAHRGHPIVGDPLYGTAEDESA---LRLVAAKLSFRDPTNGRAVEVELPeLPF
>UniRef50_C0R003(10-232:241) Pseudouridine synthase n=2 Tax=Brachyspira RepID=C0R003_BRAHW   E=8e-35 s/c=0.67 id=30% cov=95%
--MSNYINP-------IYEDNHIIVAVKPPNIPTQGdiTGDVSFFENIKDYIKIKYNKKgnvflGLVHRLDRPVSGIIVFAKTSKAASRLSEAIRDRKFEKTYYAVVNGILLEKEAKLENYLIKKTNKLGNIAQVvfenTKNAKIAKLKYNVIKEDViKNLSLLRIELETGRFHQIRVQLANIGHVIYGDRKYGSYIKYDRNDvPLALFAKSLRFPHPTRDEEIYVEA----
>UniRef50_Q2BH25(12-206:238) Pseudouridine synthase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BH25_9GAMM  E=9e-35 s/c=0.76 id=33% cov=89%
--------------QILTQTADFIIINKSPGISVHKDQGDEGLTMLLQR-QLELDEIFLIHRLDKVTSGVMVFAKNRETAADLSMQFQNREVEKFYLAVSANKPKRKQGLVCGDMEKSR--RGSWKLLRSKINPAMTQF-VSVAMKPGFRLFLLKPSTGKTHQIRVALKSEGAPILGDNMYGGEE----ADRTYLHAYQLAFT--LNEERYIFRAlPTD-
>UniRef50_C9L5B3(29-234:244) Pseudouridine synthase, RluA family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5B3_RUMHA  E=2e-34 s/c=0.72 id=28% cov=91%
--------------TVLYEDKYILVCQKPAGFPVQSKRLGtlDMECALRNYLakKGQEPYVAVIHRLDQPVQGVLVFAKDKESAAKLSKQMQQGKFEKTYLAYTQGHTDKKQETLIDELEKDGRTNTSKVVAKKTAnsKRAELSYKVLKETEEG-SLLEVSLKTGRHHQIRVQLAHAGLPIFGDAKYNVKcTKEDANHGVSLCAYKLSFLHPAKGKKMEFQ-----
>UniRef50_A1KNV2(80-285:305) Pseudouridine synthase n=13 Tax=Mycobacterium tuberculosis complex RepID=A1KNV2_MYCBP  E=2e-34 s/c=0.71 id=31% cov=92%
--------PVPFDVPVLHQDADIVVVDKPHFLATMP-RGRHVAQTALVRLRRElgLPELSPAHRLDRLTAGVLLFTTRREVRGSYQTMFARGLVRKTYLARAPVAPGLALPRLVRSRIVKRRGHL-QAVCEPGVPNAETLVERIARDG----LYRLTPTTGRTHQLRVHMAALGIPIMGDPLYPNvisVAAHDFSTPLQLLAQRIEFDDPLTGSHREFAS----
>UniRef50_Q65TD3(3-197:217) Pseudouridine synthase n=7 Tax=Pasteurellaceae RepID=Q65TD3_MANSM   E=3e-34 s/c=0.75 id=31% cov=89%
-------------FKIIHKHRDFIIIDKPNGVSVHRDEAEIGLTGLLAK-QLSVAQVWLVHRLDKVTSGLLILALNERSAAEFSLLFARHEISKTYLALSKQKPKKKQGLIIGDMEK--ARRGAWKLCQTKQNPAVTRFESVSCEP-NLRLFILKPQTGKTHQLRVAMKSLGSPILGDELYGGNSEKN--DRTYLHAFRLEFT--YQGEPFRVQS----
>UniRef50_A6GAA8(88-301:311) Pseudouridine synthase, RluA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAA8_9DELT  E=4e-34 s/c=0.68 id=32% cov=92%
----------------VHRGEDFVVLDKPAGVPVSAVRETCVGSLSEALIHQleseglERPYVGVVHRLDQGASGLVLFTIRDVANKSLHKQFRDHEIRRGYRVRVTGEP-PAQLRCDAPLIKLRSGGVKVGSPGDGrSKPATTHFRHVARvdgEAGPEHLLDVEIETGRTHQIRAHAAHLGFPIVGDRRYGADgegEAGSDHSRLCLHARSLEFEHPLTGAPQSFTCELP-
>UniRef50_C1ZCX9(21-251:269) 23S RNA-specific pseudouridylate synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCX9_PLALI  E=4e-34 s/c=0.63 id=33% cov=92%
--------------QILLEDGPLLAIWKPAGLLTQgvPQGLPTLENWVKNWIREKYAKPGNVylgipHRLDRPVSGVMLFARNSKAAARLAEVFRDRRVKKTYTAVVEGMPPQTTGRLTNYLLKDPQAAHSQIVAegTPGSKSAILDYRLLGTVAGR-SLLEIELQTGRMHQIRVQMAAMGCPVVGDQEYQTPQagdtttrtveeqsttnlttQPRGSERIALHASQIIVPHPIRFDEVTIHAP---
>UniRef50_A9KNX9(104-332:346) Pseudouridine synthase n=21 Tax=Bacteria RepID=A9KNX9_CLOPH   E=6e-34 s/c=0.64 id=26% cov=91%
-------------LDVLYEDSHVVIINKPIGMLSQRAK--ESDVSLVELLIAYLLEMGsltkeelstfkpsVCNRLDRNTSGIVIAGKSLLGLQEMSAKLQDRSLHKYYRCIVKGTMTKGA-RINGYLAKDEKTNKVRITTNDpnDGESSyiETEYQPI-LSKNGYTLLEVLLITGKTHQIRAHLSSIGHPIIGDTKYGDETLNKkmqkqyGLSHQLLHSYRLEFPNlPKELEKLSnqkIIAP---
>UniRef50_A6DTB9(82-284:290) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTB9_9BACT  E=6e-34 s/c=0.72 id=28% cov=91%
--------------QILYEDENLLLVDKPHFLPIHPA-GPYVKETLVYRLREsqNNPDISPLHRIDRLTAGLVFFSKKVSIRKDYQLLFENRLVEKTYHAISAG-PAPDQGYWHLKNRIEAGEPWFLSAIKEGKANSESYINVIE-AKDNLVKFELKPISGKKHQLRVHLASIGYPILHDPLYPSfveKPPDNYEKPMQLLAQSIAFTDPFSKKRHSFQS----
>UniRef50_Q5HN86(63-270:274) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=61 Tax=Staphylococcus RepID=Q5HN86_STAEQ  E=7e-34 s/c=0.70 id=29% cov=95%
--VSNYL-PSYRYAQIYYEDDDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTvDSEYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEYNEITRIYKANVKALLPIKPQTIDMPIGKDKFHSNKRRISN-TGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHPVIGDPLYGT----STLRQLELNSHQIEFTHPLTQEIISVS-----
>UniRef50_C1EDH6(65-290:345) Predicted protein n=2 Tax=Micromonas RepID=C1EDH6_9CHLO   E=1e-33 s/c=0.64 id=32% cov=91%
---------------VIHEDDDVLVIDKPAGMSFHNDDLVTNLPGVLSTVRAlqakgelrgsdYAGELHSVHRLDKITSGILLLAKNERVASWLARQFARRRVHKYYVALSARKPSKKMGTVRGDMAQARRGTYKLTRCSSNSTPAAVTKFVSRgvrgasPGGDRPLRVLLmRPLTGKTHQLRVCAKSLGAPVLGDAAYGGADTNKNAnkndgaggeDRGYLHAAALRVAMP-GGNVMEVVC----
>UniRef50_A8TF58(100-362:372) Pseudouridine synthase n=1 Tax=Methanococcus voltae A3 RepID=A8TF58_METVO  E=1e-33 s/c=0.55 id=25% cov=95%
------------PMDIMYEDMDILVVNKPKNMVVHPTKTIKSGTLANAIMDYQNHnkseserfKIRFINRIDMDTTGIVLIAKNSFAHQKIANQFQ-GCMKKEYLAVISGNMDvdnldtnlnnsldtelnnnlndekynlPLNLRLKIYKENNSKFSVIIFDRDTDELIEHTNFEIIKNTKDtkdnkdnkdteisnNFTLIKASLITGKTHQIRRHLAYLGFSIVGDELYTNNNElndNFKNYSLMLHSYKTTFIHPRTNELIELieEPPKDF
>UniRef50_A5ZQH2(41-270:288) Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQH2_9FIRM  E=1e-33 s/c=0.63 id=30% cov=93%
-------------LDIIYEDTDILLINKPAGMLSQPDDTKE--PSMVEYLIGYLlqngslteenlrtFHPSVCNRLDKNTSGVIAAGKSLAGLQELSTLFHDRTVHKDYLCIVKGKLTRSRHI-RGYLHKDANLNKVSVspTKEKDAQPIETQYTPIC-NNEHATLLKVRLITGRTHQIRAHLASEGHPLAGDAKYGSQEFNRyfrdhyGLKHQLLHAYRLTFPelegklHNLSEKHFEAVLPVQF
>UniRef50_B7AN06(42-275:297) Pseudouridine synthase n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN06_9BACE  E=2e-33 s/c=0.62 id=28% cov=95%
--------PDKIKLKVMYEDEDIVIIDKPSGMLSQKASAGD--KSLVEYVTEYLldtgsltqkdlitFRPGICNRLDRNTSGLVVAGKTIKGLQEMSEAFRDRTLHKYYICVVAGRINERSRVSGYLVRDEKTNKSTIYADYKEAMDNAEADMINnieteyipAVSNDNFTLLKVKLITGRTHQIRAHLASLGHPIAGDVKYGSRQINKrmsdqyHIKSQMLHAYEL--DYPQRGLCVRTDIPKEF
>UniRef50_C0QPR0(68-262:272) Pseudouridine synthase n=4 Tax=Hydrogenothermaceae RepID=C0QPR0_PERMH  E=2e-33 s/c=0.74 id=29% cov=86%
----------KPEKSVIYEDQFILAVQKPPFLES-----EGRKGSVEYQLRKVLDRRlKAIHRLDRETSGVLLFAKNEKIFHRFKDLWHRKEVVKVYLSISYGEAKFKKKVVNMPVDKKYAKSIFFTKKISKG----------------FTLFEVEIKTGRKHQIRIHSSKIRHPIVGDKIYGLKKVEDPLtknvKRQMLHGYRLRFLHPFTGKVVDIKAPVyhDF
>UniRef50_A2U235(1-220:234) Pseudouridine synthase n=3 Tax=Flavobacteriaceae RepID=A2U235_9FLAO   E=2e-33 s/c=0.65 id=27% cov=95%
-------------LEIIYEDAYLLCVTKPNNVLVHHAYHSRNmadEKSLLQLVSEETGlKVYPIHRLDRKTSGAILLAKEKEYVAKFQDLFTKNQIQKIYYGVVRGFSPSTKRIDSPVKGRDANVHKEALTELKTLAKITLDIAVKPYDSSRYSLIELFPKTGRMHQLRVHSNKISHPLIGDAKYGDKnhdmmfEQNFGFKNLFLHAGKLEFIHPYTQETLILKStfPTDW
>UniRef50_Q09709(96-277:394) Uncharacterized protein C18B11.02c n=1 Tax=Schizosaccharomyces pombe RepID=YA32_SCHPO  E=3e-33 s/c=0.79 id=31% cov=81%
-------PPVsDQPVGIVHEDESYVVIDKPAGVPVHPTGRYNHNTVLHILMKENKCSlLYPCNRLDRLTSGLMFFSKSPKAAEEMRVHMISKSLKKEYVARVIgEFPNSGEVICDAPLLTVAPTLGLNRI-HPDGKEASTVFKRIAFDG-HTSLVLCKPLTGRTHQLRVHLQYLGYPIANDPIYANKR----------------------------------
>UniRef50_A8JB96(90-303:303) Pseudouridine synthase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JB96_CHLRE  E=4e-33 s/c=0.67 id=28% cov=93%
-------PPSPCHVDVVYEDADMVALSKPSGLQVLPAAMFHQRTVLsLLRRRQYLDVPAPVHRLGRGTSGCGAAALAALISSAPASGSGCQLpLRKFYRALVQGRVKADQGRVDVPIGpiPHPGVDRGLFAATPDGKPAASVWRAGCMEAE-CTLMEVEILTGRPHQIRIHMAAMGHPLVGDPLYGAGGRPKVRYRLygsdcgyYLHSLELHLPHPITGQPL--------
>UniRef50_Q11NL4(10-221:223) Pseudouridine synthase n=2 Tax=Bacteria RepID=Q11NL4_CYTH3   E=4e-33 s/c=0.67 id=30% cov=91%
--------------HILYEDNYILVVNKPCSLMVEPDRNGH--PNLLQQVQKYVKKslhpnkevyVQHIHRLDRPVSGIVLFAKKKSMLKELSEQFAQRTVKKYYQALTRKVTTNGKGALNHWHFKDSKNKKAILYKEEQQETsAVSLGYSTSDYNADYTLWDIQLNTGKYHQIRAQLSFEGYPILGDECYKSTDVYAPNA-IALHACKLEFVHPVSKESMRLEA----
>UniRef50_A0QT71(83-286:291) Pseudouridine synthase n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QT71_MYCS2  E=6e-33 s/c=0.70 id=32% cov=89%
-------------IPVLYRDDDIVVVDKPHFLATMP-RGGHVTQTALVRLRRelDLPELAPAHRLDRLTAGVLLFTVRRELRGAYQTMFARGDVQKTYLAHAEGVPK--IALPATLRSRIVKHRGRLQAFEEPGEPNAETY----VEAVGDGLYRLTPRTGRTHQLRVHMASIGLPITGDPFYPtviDVAPGDFSRPLQLLAKRLMFDDPVSGARREFVS----
>UniRef50_A0LBW6(8-211:224) Pseudouridine synthase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBW6_MAGSM  E=8e-33 s/c=0.70 id=36% cov=92%
----------DPTRHILHMDADLLIFNKPNRMPIYrgPGGGETLADHLPQLCFERGKPPAAVHRLDSATSGCLVLGRHKGMRRSLSNLFAQGGVEKLYWAVVQGRPLMDQGLIELPLQ-DVGWPGRPRVkVRMGGKWGRTLFQVMGY-GQNETLLALMPQTGRTHQLRVHCAAMGCPIVGDPLYGGAACDG--PPMHLHARRI-LLHGAIQQ--SFTAPAP-
>UniRef50_A2R658(112-291:484) Similarity: patentmatch against protein AC A46560_1 Trembl n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2R658_ASPNC  E=9e-33 s/c=0.79 id=32% cov=74%
---------------IIHEDDDLIVIDKPAGVPVHSAGRYHYNSVLEIMRSQRHPEWvpRPCNRLDRLTSGVMFLGKTAKAAENMTGKLKARTLQKEYVARVKGKFPDGVIVCDQPIMSVSPKVGLNRV-RATGKEAKTKFRRL-------AIVHCLPLTGRTHQIRVHLQFLGHPISNDPIYSNRK----------------------------------
>UniRef50_Q9VKU8(209-393:547) RluA-2 n=6 Tax=Sophophora RepID=Q9VKU8_DROME   E=1e-32 s/c=0.77 id=32% cov=79%
------VPVTSQPIKIVYMDKDIVVVNKPASIPVHPCGRYRHNTVVFILAKEHnLKNLRTIHRLDRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGRFPDGIVECNEKIDVVSYKIGVCKV-SPKGKDCKTTFKRIGEVGSD-SIVLCKPLTGRMHQIRVHLQFLGYPISNDPLY--------------------------------------
>UniRef50_A8SS78(6-222:238) Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A8SS78_9FIRM  E=1e-32 s/c=0.65 id=29% cov=92%
-------------LNILHEDSDIIVAVKPCGVPTQPDKTNSESMVSMLKLRIYERENRkeepylvPIHRLDRPVGGVMVFAKTPEAAAALSKQSEDGTMLKYYQAILTGELPNDQGVLKDYLLHDTKDNVTKTVDKDtpGAKYSELEYEVLdvmDTDEGVLSYVLVELITGRHHQIRAQFAKRKCGIWGDTKYNPKFQKTKKKYkeIGLHASRLEFDHPTTGEHMVFK-----
>UniRef50_C7NCB1(67-369:380) Pseudouridine synthase n=3 Tax=Fusobacteriaceae RepID=C7NCB1_LEPBD   E=3e-32 s/c=0.46 id=28% cov=94%
--------PIKLPLDIIFEDEDILVVNKEPFLLTHPTQKKADFTLANGIVNHFFEKYgevrvpRFYNRLDMNTSGLIIIAKN-SFAQAFLQNFS--IFEKKYLAIvNGIIDDKGIARINEELAKDGEKHKIQdlekenlksevekinfgkvkkyeeiekiesnlnvenedskiaentnfdnkdnnlnlanksnfenenlkenktkiiierrifrdgenleRIIDTRGQYAKTAIKVLKvYPEKNVTLVECELFTGRTHQIRVHLKSIGHTIVGDELYGNGlNKELGINRQFLHAYKVKFIHPALKKEIELEIP---
>UniRef50_C1A2U5(89-308:360) Pseudouridine synthase n=3 Tax=Actinomycetales RepID=C1A2U5_RHOE4   E=3e-32 s/c=0.64 id=31% cov=94%
--------PVPFHEEILHLDDDLVVIDKPHFLPTTPsGRYLRESALVRLRVRLDNPDLTPIHRLDRGTAGVVMFSARPATRGAYQSLFEKRQVTKVYEAVsarpsRWDQDAPALDVPLVYRNHIEARRGELRVVVDDSREPNSETTIEARgtgvsaSGRAVLHTVLRPQSGRMHQLRVHLAALGAGILGDRRYPDllpDAPDDHSLPLQLLARELEFTDPLSGRARRF------
>UniRef50_B5EI85(84-287:293) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=B5EI85_GEOBB   E=3e-32 s/c=0.69 id=28% cov=91%
--------------EILFQNDELLVACKPHFLPVTPG-GEYLSQSLLHRLRESTGIHDLVplHRIDRETAGIVLFSANPKTRGRYGELFREGSIEKSYEAISAAPVEPGQAEWLVE-NRLVHGEPWFTMRTEQGPPNARSLIRLVEQRDGAARFQLTPVTGKTHQLRVHMSGLGLQILHDRLYPqlqPQQPDDFDRPLQLLARRVRFRDPLSGRLLEFES----
>UniRef50_D2R795(73-328:341) Pseudouridine synthase, RluA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R795_9PLAN  E=3e-32 s/c=0.55 id=30% cov=94%
------KPADEKDVRIRHVDNHLVVVEKPAGMTTerHPEEKNWpsrrkqlqpTLDEVLPRLLAKHlgwkipreaagsaaakgrrtqpapklPRIFAVHRLDRDTSGLMVFARTPEASTALIKLFKKHHVTRAYVAVVHGTPVEQK--IETYLVRDRGDGLRGsspaGKVAEEAQRAVTHVRLMQTIG-PYSVVECRLETGRTHQIRIHLAEAGHMLCGEKVYTHKlgeksqRDESGAPRQALHAAELGFVHPITSEPLIWR-----
>UniRef50_A9UX27(100-289:401) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX27_MONBE   E=4e-32 s/c=0.74 id=28% cov=76%
------------PLSIVGETPDLLAIDKPASIPVHPCGRYRH-NTVQAILGHEHDRWRvyPCHRLDRLTSGLLIFCKNPAMAKQFEQWITQHQVEKQYICRVQGRVEQSVLFCDAPL-KICDQRLGLCCVHPEGKASLTRFRVIRRDKD-TTVLHCFPKTGRMHQIRVHVQYLGHPIVNDPVY--------------------------------------
>UniRef50_A5FWV1(6-176:224) Pseudouridine synthase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWV1_ACICJ  E=4e-32 s/c=0.82 id=36% cov=76%
---------------ILYHSTHLVVIDKPAGLPSHRGRgGGPSVEDWFPRWRRGADGPWLVHRLDADTAGCLAIARRKTTLVALQRAFAQRRVGKTYWAIVEGVPAAAHGTIELALARRTVPGGWRVAPDPRGDPAITDWRCLA-AGQGRALLELRPRTGRTHQLRVHCAESGFPIVGDPLYG-------------------------------------
>UniRef50_Q57Z98(599-815:828) Putative uncharacterized protein n=3 Tax=Trypanosoma RepID=Q57Z98_9TRYP  E=1e-31 s/c=0.64 id=27% cov=90%
-----------PIFPVVYEDDDLLVINKPPHVATSRHAlscsqlcDDKATDIVSLQLtckkrgdvMRRVFRQGQVHRLDTETSGCLIMAKSDVAASSLRHQMgtsaAYSQSSKIYLALCAVVESNLTNIPLNGVLRDPA----------DAKITTKYRIVHFYKRFRVALVEARIQQGKKHQIRRHLAAVGLPILQDVEHGGAACCSpLLQRVALHASSVTVVHPRTAEVLTCVAPLP-
>UniRef50_B0RMG5(109-311:319) Pseudouridine synthase n=4 Tax=Gammaproteobacteria RepID=B0RMG5_XANCB  E=1e-31 s/c=0.68 id=34% cov=90%
--------------TVVHADGQIVVACKPHFLPVVPA-GAYVRETLLARLVRRFDNPSLVplHRIDRDTAGLVLFSANPATRGIYQALFRERRIHKHYLAV--APPLPALTFPYVHRSRLEPGEPFFRMREGVGEPnSETVIDVVARGADMWT-YRLEPVTGRKHQLRVHMAALGVPILHDRFYPeleDQRPDDPERPLQLFAHMLAFDDPITGEPRRFTA----
>UniRef50_A4B9B1(4-199:214) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4B9B1_9GAMM  E=2e-31 s/c=0.70 id=35% cov=89%
-----------PEPTILTATDAYFVIVKPTGWTVQR---DAQAPSVLEWLNDQGHTAFPVHRLDKPTSGLLLVARTTEANRALSLGFAEGRVEKTYLAISDRRPRKKQGWVRGDMA--PSRRSQWKLLREQNNPAITRFRSVSLD-DGERGFVLYPKTGKTHQLRVALKSLGSPMLGDTLYGG----TPADRLYLHAWRLAFD--FEGERLSYQAdPID-
>UniRef50_A6QCU7(73-291:309) Ribosomal large subunit pseudouridine synthase, RluD subfamily n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QCU7_SULNB  E=3e-31 s/c=0.63 id=34% cov=92%
----------------LFSNRDFMIFEKPSGVLVHPNTMSTPYSMLDEIRHISGDNANATHRIDMETSGLLLASKHKKAETHLKNSFEAKTIKKSYLAWVDGRLNEPFSVSEKIKINNDYSRVKHKVFISDaGKASHTDFIPLRYNERlDATLVACYPQTGRTHQIRVHLFHVKHPILGDPIYGTtfdtanryledeiseeeRFLETGARRLMLHAHTLSFT---YGNRFHIKSKSDF
>UniRef50_A6T3V4(96-310:316) RNA pseudouridylate synthase family protein n=11 Tax=Proteobacteria RepID=A6T3V4_JANMA  E=3e-31 s/c=0.64 id=29% cov=93%
--------PDEPRIPfdevVLYQDDYLVAVDKPHFLPVTPA-GRYLQETLLVRLKRslDIDTLAPMHRIDRETAGLVLFTIQPQTRNLYQTLFRERSVSKEYEAIaPLRADLELPTTYRSRLLESEAFMKMCEVAGEA--NSETAISLLETRG-NFGRYLLQPVSGQKHQLRAHMAALGIPIVNDRIYPHlypdeGATQDYSQPLQLLAKSISFTDPLSGKLHRFDS----
>UniRef50_Q0S710(116-330:338) Pseudouridine synthase n=31 Tax=Bacteria RepID=Q0S710_RHOSR   E=5e-31 s/c=0.63 id=31% cov=94%
------DPPVEkrvpFDIEILHRDEDLLVVDKPHFLASTP-RGAYVAESALVRLRRDFdlPELTPAHRLDRLTAGVLIFTVRREVRRDYQSLFDQRRVVKEYEAVARYDPDlRLPATVRSRIVKERGVLKAYEM--DGPANSESRIELLEIHGD-AARYRLLPHTGKTHQLRLHMSSLGIPIHGDNFYPDFydvAADDYSTPLRLLARSVEFVDPYSGVTRRFAS----
>UniRef50_UPI00016C4D9D(126-336:354) pseudouridine synthase, RluA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4D9D  E=6e-31 s/c=0.64 id=33% cov=73%
-----------------------------------------------------------VHRLDRDTSGLVVFARTRAAGENLTAQFRKHSTERRYLALTRGVPKPGRIASVFVSDRGDGRRGTTTDLAADGKRAVTHVAVLEPLG-PFALVECRLETGRTHQVRIHLGEAGAPLCGEGVYDRPidgqplPDGSGAQRPMLHATRLGFAHPDTGAAVSWEVPPP-
>UniRef50_C0W298(125-357:358) Pseudouridine synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W298_9ACTO  E=2e-30 s/c=0.58 id=23% cov=94%
---------EHIHIPIVHRGNGWLVINKPKDIASTPrGSYIVRTATIALRRQEGNADLTPAHRLDRATSGLLLFTERPELRGMYQDLFQNRQVTKTYRAtakaidfnyikssalVKITVDPEEQPGWVKIESRIEKRPGDPGAQHAFGKInAVTYLRPVKTvtiEGQQFVEYEVQPQTGKTHQIRLHFASLGAPLVGDPLYGGfnaapfglEKVPAGYQELHLEACRLEFKDPQTQEMVKIE-----
>UniRef50_Q07X80(108-321:326) Pseudouridine synthase n=17 Tax=Alteromonadales RepID=Q07X80_SHEFN   E=2e-30 s/c=0.63 id=30% cov=92%
--------------QVLYQDNDTIIVYKPHFLPVTPGGNYVNECLVHrLRIATQIDTVAPAHRLDKDTAGVMLMTLNPQTRHAYHQLFLDDKITKDYQAIAKLTPtllsEFADNTCMLPIHWTVKNRivaanPSFTMQVVEGEANSHSEISLVAVKNGFGLFELSPITGKTHQLRVHMQSLGMPILHDRFYPvllPKGPDNFDKPLQLLAKRLRFTDPISAIEQDFQC----
>UniRef50_A0LJK9(86-291:304) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJK9_SYNFM  E=6e-30 s/c=0.65 id=31% cov=90%
---------------ILYRDAHLLAYDKEAGVPSQQTPADAYNNLYAALIrflageaRASAPYVALHHRLDRETSGVMVFALDRAVNRRLGESFQEKRVVKDYLAWVDGVPVLDRWTAVEDICRKDGRYRTC--PQGRGKAARTLLRVLLRAGDR-ALIAARPVTGRTHQIRLHLAACGHPVIGDRLYGGTSGERLHLHA----LRLRLPHPKHDSELVLSAPVP-
>UniRef50_A6DK57(8-201:218) Ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK57_9BACT  E=6e-30 s/c=0.68 id=30% cov=89%
---------------IIYEKDGLLVLNKPYDLPSTGRKLDDDDCLQYWLIQRQGAMVWAVHQLDADTSGINLFVTEKKLVKYYKELLEQAQADKQYLAIVHGVPSWKQCEEHGRIGKVD---ARSLGIHAEGKTAHSHFEVIGSVKD-FSLIKVKIFTGRTHQIRIHLSHLGHPLVGEEWYCDPPCTAH-QRQALHCYKVHL--PQT--AHTFSSPL--
>UniRef50_A8REN7(82-283:313) Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REN7_9FIRM  E=1e-29 s/c=0.65 id=25% cov=86%
-------------LDIVYEDENLLIVNKAKGLLAHRDQKVGQ-DNLMDRILHYLYIHkeydprmensfvpALCHRIDRNTQGLVIAAKNAASLRAMNAHIKQRKVRKKYVCIAQGVFDKRQEHVLLYHCKTKDNVAHILPYPKEGYKPIEINYQIKEQKKQYALVEVELLSGKSHQIRAMLAYLSHPLYGDVKYGAKHTAAK-HYQMLCAYRIEFV----------------
>UniRef50_C5BI24(4-199:231) Pseudouridine synthase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BI24_TERTT  E=1e-29 s/c=0.67 id=28% cov=89%
--------------SIVDEQPGFLLIHKYPGAVVH-GTADSGEITLTQSLRHDFSCKslFPCHRLDRTTSGLLVVAKGEAANKYFSTLFEKRAIDKCYLALSAKKPAKKQGAVRGDMVKARNGSWMLTRSL----NAPAHTQFFSKGGvEGKRLFVLRPITGKTHQLRVAMKSLGAPILGDERYGGGD----ADRCYLHAFALQFS--VDGNEYSYVCPPE-
>UniRef50_Q2SKD2(4-201:231) Pseudouridylate synthases, 23S RNA-specific n=3 Tax=Proteobacteria RepID=Q2SKD2_HAHCH  E=2e-29 s/c=0.66 id=28% cov=90%
-----------PPFQIVsdY--DDLLVVDKAPGISFHDEEGQPGLCSCVADTL--GIRVYPVHRLDKVTSGLLLLPKTPALARELTEQFSLRQVEKYYLALSAHKPQKKQGKIIGDMEKARAGAWKLTAGREN--PAVTQFFSHSLQPGVRAFM-VRPLTGKTHQIRVALKSVSAPIAGDSLYGGR-ANKEFDRTYLHAYGVRFN--YRGNRTAILCPP--
>UniRef50_A8RLV7(2-243:274) Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8RLV7_9CLOT  E=2e-29 s/c=0.54 id=31% cov=91%
--------------PILYEDKDIIVVQKPAGLESQVSRG--FAPDMVSEIRRYLhnpqdihnhpqgvstaqpPYVGVIHRLDKPVEGIMVYALNQKSAASLSAALQAGKIKKSYLAVVCGKPVDKQGTYVDYLRHCKENNTSKIVDksDENSKKAVLNYRVLEVINNPknqeqiLSLIDIELLTGRHHQIRVQFAGHATPLYGDERYGGGLStksttmtvdrgrkkssfGDAHRPLALCARRLAFPHPSTGKIMEFS-----
>UniRef50_UPI000197A463(57-294:310) hypothetical protein HcinC1_08895 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197A463  E=6e-29 s/c=0.54 id=28% cov=98%
--LSEFVPSSIPHLaDIepLFYNDDFAIYDKPHNLLTHP-KGRFFHYSLNDILKSRFGIQANAlHRLDKQTGGLVLCSINPKSKKALESLMQSRSIAKSYCAIVEGRVKAEILINEPIMTqKHKGDLAIKSIVSEKGKESRTLIRPLAYYKDSTLIHALAL-TGRTHQIRLHCSYIGHRILGDPLYGVSEDKSRfyleapnlspkehkalfdAPFLCLNAYALRFS--FQGSDYHFKSNAPF
>UniRef50_C7LP84(5-202:232) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP84_DESBD  E=7e-29 s/c=0.65 id=32% cov=90%
-----------PGFELIAREPGFVVVHKDPGLDFHDCDGRMGLCSLVrDRLQA---RVFPVHRLDKATSGLLLLARSREWAAALAGLFRERAVQKYYIALSDLTPGKKQGLVQGDMVRSRRGSWKLARSME--RPARTRFLSWSVRP-GMRLFVLKPMSGRTHQLRVAMKSLGAPILGDSLY-HPIVPDWPDRMYLHAHTLRFS--LGGQNFAYACPP--
>UniRef50_C1E9U3(209-528:545) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E9U3_9CHLO   E=7e-29 s/c=0.40 id=35% cov=94%
------------PLDVIHEDDDVLVVNKPPGLRFHPVHRFE-GNSLLSRAIGHVRRsgrdddrldgdaagdghahvPHVVHRLDMDTSGVCVLVKRPELVDGFARQFRgdagERRAVKEYLAIGVgaappgvtgcvvkadWKPPEASGNEQTtaaefigveftvdahvgphasipearavhrppPTPERIPKRNGSGGDPDAPKPARTDVRIVSSSRVPidvnddgdvmqsltAVLARVRLHTGRTHQIRVHMAHADLPILSDPLYGPHirwdgaspcadastsailppgvdadvwGGPRWLGRQALHAARLTLRHPETNEEMTFEARAP-
>UniRef50_B8CVD5(16-194:237) Pseudouridine synthase n=15 Tax=Shewanella RepID=B8CVD5_SHEPW   E=9e-29 s/c=0.72 id=29% cov=82%
--------------QIIADEADFIVICKSANIHFHSQDGSAG--VVAQAELDLGIKLYSVHRLDTMTSGLLILAKSSAVAAEFTRQFSEHKVQKYYLALAKGKPKKKQGWVIGDMAKSRRSMHKLLRSMDN--PAKTQFFSHSV-GDGLRLYLLKPLSGKTHQLRVALASIGVPILGDELYGGDA----SDRGYLHAYSLNF-----------------
>UniRef50_B0D7R4(31-257:321) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7R4_LACBS  E=1e-28 s/c=0.56 id=29% cov=93%
----------------LYVDPAVAVVTKPHGLVCQlihrqlPAGRVNHFNVMMQDLKAHLSletFPYPVHRLDKSTTGAFLLALTESSARQLSQQFQKRTVQKTYLALVRGGEKSFPEKFGEIRTTLNKVDGYPEVDLSSqGQPCATDWKLLASSPiAPISLLELNLLTGYKHQLRVHLAKCLHaPILGDAQYSKKPlssaitdvVKIPEDRIFLHASEISFLKykssgPHKQFRLAVRAPLP-
>UniRef50_C2HWY8(1-165:177) Pseudouridine synthase n=2 Tax=Vibrio cholerae RepID=C2HWY8_VIBCH   E=2e-28 s/c=0.77 id=52% cov=54%
MAMTEYNPPKEPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQDEGEVNLPIVCN-----------------------------------------------------------------------------------------------------
>UniRef50_Q7VI73(66-289:303) Pseudouridine synthase n=1 Tax=Helicobacter hepaticus RepID=Q7VI73_HELHP  E=3e-28 s/c=0.57 id=28% cov=93%
----------DIELEPLFFNEDFCVYDKPHNLLTHP-KGRFYHYSLNDALKLRFGNYANaIHRLDKQTSGLVLCAINPQSEPELKELISTRQILKTYYAIVEGKLTQECLIDEPIALQKYKgtDLSIKSIISPYGKPSRTKLYPLAYhSPTDSTLIRVLPLTGRTHQIRLHCAHIGHRILGDPLYGTKEEysrfylespalpphqyesYFGAPYLCLNAHTLAFS--FKGKSYYFTS----
>UniRef50_Q54UF9(227-439:578) Pseudouridine synthase family protein n=1 Tax=Dictyostelium discoideum RepID=Q54UF9_DICDI  E=4e-28 s/c=0.59 id=31% cov=80%
-------PPVTGEsIKIVSLDENVVVVDKPSSIPVHPCGRFRHNSLMYILASEHGiNQLYGVHRLDRLTSGLLLLARTPDSANKKANQIQSGLVSKQYLAKVIGKFPgsdtinsssssfneqiklckhleDGTFIIDQPIVIQSMRLGINHVGV-GGKPSITHIKLFSYDqSTNTSIVLCTPKTGRTHQIRVHLKWLGFPIANDPLYNN------------------------------------
>UniRef50_B9Z169(8-195:229) Pseudouridine synthase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z169_9NEIS  E=8e-28 s/c=0.66 id=30% cov=86%
-------------------DPRFYVIAKHPGVSFHR-QGDEAGLMEALRAQLADDALWPVHRLDRLTSGLLLVARSAEVASRLAEAFAAREIEKYYLALSDRKPQKKQGLVRGDMVKGRG--GAWRLLPSSANPAITQFFSFSLAP-GLRLFILRPHSGKTHQLRVALKSLSAPILGDELYGG----TPSDRGYLHAYSLAF-H-LDGERFHFICPP--
>UniRef50_C7LWX3(84-268:306) Pseudouridine synthase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWX3_DESBD  E=8e-28 s/c=0.68 id=30% cov=83%
-----------PGLRGVFENDEMLVIDKLAGLPVHGGTGW--TDSVHDRLKACFAGQAfvpiPVHRLDRDTSGLLLCAKTHDFLRAMHASWP--TLTKGYLCWVEGAWAAAGWRTVVSELAKAQTGSGEQVVSGQGKRAVSHVHPVLVTAGK-SLLLVVLGTGRTHQIRVHLADCGHAIVGDPRYGQGGG------LLLHAAALSWP----------------
>UniRef50_C3XMA2(103-284:290) Pseudouridine synthase n=2 Tax=Helicobacter RepID=C3XMA2_9HELI   E=1e-27 s/c=0.69 id=27% cov=82%
----------------IFCNENILALEKPAFLTS-------------EEIVKSYPQWTLLHRLDKETSGILLLVKeNSSFHLKAKEAFKQLQVLKQYTAIVEGILDEECEITAPLIIKKGKSAKVSISKTNEGQKAITHITPLEIFGKKTKL-DIEIKTGKTHQIRAHLAHIKHPIIGDTLYGAKPAN----RILLHARHIALlgYNFTSNEPKEF------
>UniRef50_A8XVV3(147-322:438) Putative uncharacterized protein n=2 Tax=root RepID=A8XVV3_CAEBR   E=1e-27 s/c=0.71 id=28% cov=79%
------HPVRDLPIRIISETDDLLVIEKPPSLPVH-TCGQYAIHTVLGQLRENEEKTglRVLHRLDRATSGVLLFAKNYETDLEFKTTLKQGEWSKEYVCKVDGVFPDEEQVCEQPIGPLVISMGIQCV-RPDGKEAKSTFRKLWSDGTH-SVVQVHIETGRTHQIRVHSQFLGYPIVGDQLY--------------------------------------
>UniRef50_Q73KM2(4-215:236) Pseudouridine synthase n=1 Tax=Treponema denticola RepID=Q73KM2_TREDE  E=2e-27 s/c=0.58 id=26% cov=87%
---------------ILFEDNFFAVVLKNCG---------DNSQVFFKKAFSEKKYAEAVNRLDKPVSGLVLIAFSPAMHTKLNNLFKEKKIKKEYWAICKKieelksaadskisdttPVLYKKEFCENYLEFNTKIQKAFVTESRQRGKKASLYWQLAGIGDNYNFLRIFPETGRTHQIRIQLSHLGMPIKGDIKYGFARTEK-SGGIRLHAQSLKFEHPESKKRIEISA----
>UniRef50_A3YUH6(87-324:328) Pseudouridine synthase n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YUH6_9SYNE  E=6e-27 s/c=0.52 id=29% cov=92%
---------------VIHDDGDLYVIDKPSGLPVLPAGGflEHTLLRLLERSCAAQALPRPVHRLGRHTSGLLVCARRPQSRAWLSARLREstaqllnqpgsearsaatraGACRKVYRALTVPAPLQlapgESLAITTPIGRRPHAGLGQIWaadgpDDPGALPAWSEMRLLERRPQG-HLVEVSIHTGRPHQIRIHLASAGVPLLGDPLYrpggePRPGALPGDGGYLLHAHRLRLPLPAGG-WLDLEAPVP-
>UniRef50_Q7VIG5(55-238:245) Ribosomal pseudouridine synthase n=2 Tax=Helicobacter RepID=Q7VIG5_HELHP  E=1e-26 s/c=0.66 id=30% cov=84%
--------PKKP--KVLFTDEHILALEKPPFIES-------------YDLSNMFEGWHLLHRLDRETSGVILLIKEGSAfHIKAKEAFKNQEVYKEYVCL-VHGILADSIEINKAISTTKRGFAKSRID-KKGLNALTLLTPLSIMGKKTLLKAL-IKTGRTHQIRVHCQSINHPILGDRIYGK---NDEAKRLMLHAHKIALL------GYEFTSPLP-
>UniRef50_C4QA60(143-337:455) Ribosomal pseudouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QA60_SCHMA  E=6e-26 s/c=0.61 id=29% cov=81%
-------PVLNLPIEFVHDSDDILVVNKPPSIPIHPC-GQYTLNSITHILAKDYGlrPLRFTHRLDRMTSGLLLIAKNYDTSVRLQSQISSKEVAKYYICHVEGCFPtepidqctgfeinNGVVVCSQPVGPISRRMGVHGVLPEsaGGKFARTHFLRLSYNPvTDTSLVICRLFTGRTHQIRIHVQYLGYPIVDDPLYNSAD----------------------------------
>UniRef50_C2L0N0(1-186:206) Pseudouridylate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2L0N0_9FIRM  E=7e-26 s/c=0.64 id=27% cov=83%
--------------MIIEETKDYLVFYKEAGL---------------DSEKDAPKDCLPIHRLDKVASGLLLYGKNKEAAAALSRQLTEKKIKKRYHIVVPKgeegKALPEEGCFQDYLYKDSKKQKCFPVksLRKGVKEAILRYKILEENGE-WMLLDVELETGRFHQIRAQFASRGFPLYGDGKYGSRQKGTVG----LHCYQLSFLDVKTGEERGFE-----
>UniRef50_A5IZG0(83-264:284) Ribosomal large subunit pseudouridine synthaseC n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZG0_MYCAP  E=2e-25 s/c=0.65 id=27% cov=81%
--------------EIVYEDDNILLINKKAGTIVH-GDSNCLDNQVFSYFKFRQnsaFRPSHVGRLDKWTSGLIMYAKNYQTLTELNH--KTEFLDKIYVLKSDYNP--HDEIVSVYIHHDELQQKMVAtknMQHPNDKIAKT------RFFKKDNKLYAQLFTGRKHQIRATLEYLGYPIYGDSKYGSKT--KGTKRVYLHCYKLKFN----------------
>UniRef50_Q2BL24(81-265:313) Pseudouridine synthase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BL24_9GAMM  E=4e-25 s/c=0.63 id=32% cov=75%
----------------VWESDELMAINKPPLLPVSRTTRNLYMTLIsLVRRQTPYPDAQLLHRLDTETSGLILLAKNREADRKWKPQLAKLIRRKVYQAWVHGSPNWDHLLMECELSEKAGSDIRSQVYVVEpqsdsqylkPRPSKTEFLVLQRAG-SKSLIQCELFTGRKHQIRAQLAHLGHPIIGDKIY--------------------------------------
>UniRef50_A9RVX3(62-264:361) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVX3_PHYPA  E=7e-25 s/c=0.57 id=26% cov=85%
----------PPTIERLYEDQYIIGVSKPGTLLVHnnkaSSPLEKQRNAFLKNMVEaqltAGQKVSPVHRLDRPASGAIIFSKSAVATRAAQASLSHPACIKEYVVLARGT-TPDFFICDEPVNDEKGAPKSAVSQCE---------KILDLPESRCSLLKVVIKTGRWHQIRKHLNHRAHHVVGDVKHGKGKTNRFFRenhkmlsgRIFLHAARLTFPHP--------------
>UniRef50_Q5DDR8(126-320:438) SJCHGC01065 protein n=3 Tax=Schistosoma RepID=Q5DDR8_SCHJA   E=9e-25 s/c=0.59 id=29% cov=79%
-------PVLNLPIEFIHDSHDMLVINKPPSIPIHPC-GRYTLNSITHILAKDYGlrPLRFTHRLDRMTSGLLLIAKDYDTSVRLQSQIASKEVTKHYICHVDGCFPtepidhctgfeinNGVVVCSQPVGPISPKMGIHAVLPEsaGGKPARTHFLRLNYNSvTNTSLVICRLFTGRTHQIRIHTQYLGYPIVEDPIY--------------------------------------
>UniRef50_UPI0000E0E896(2-204:240) 23S rRNA pseudouridylate synthase n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E896  E=1e-24 s/c=0.57 id=26% cov=89%
--------------QVLYDHSDFFIIAKPQGVTMHeasnglPAVLPLFKAALanMAYPEAQYAHLHLVHRLDDHTSGCLIIAKHAVAAERFRELFSQQRIQKYYVALSHAKGKRKAGWVKGDMVNKRKGQWVLTKSVERPAIS---YFFRQGLGNGLYLFWVKPFSGKTHQVRVALKSNGSGILGDPQYSSE----PAQRMYLHAFALDFI--YDDEPIQIHCPVD-
>UniRef50_B5YM19(53-322:344) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YM19_THAPS  E=1e-24 s/c=0.43 id=26% cov=95%
----------NINIPIIYENDQLLAVCKPPHI-SHHDDPASNQLGLLSLIRlqqqqqqqqdessfPYPHRLHGVHRLDRVTSGVLLLAKDSSVANELITKFRQGEVSKYYMAIsgkKPKKKKQGWVKGQMVMGRRGsyklvnenrdvldegdgddevEDGGEVSQVKKKGGYAVTRFYTAglgdlqlaplpkcdgDESNDDELLipktaILFQPHTGKTHQLRVAAKSAGIPILGDVRYGGgtvtqREENANFDRTYLHASAIHFQ--LNDEDVTIWSPPPF
>UniRef50_Q602D5(74-259:281) Ribosomal large subunit pseudouridine synthase n=3 Tax=Mycoplasma hyopneumoniae RepID=Q602D5_MYCH2  E=2e-24 s/c=0.61 id=25% cov=84%
------VPEFKLNLKIIYQDENILLVDKPQNLQVHGGKFN-LDLAVWNYLKipeNQVFKPSHIGRLDKKTSGIILYGLNYQSVVELNQ--KQKFFEKIYTFKSDINLKNTIKTDVF--IRKNNFQQKMEVTLKSPNSFFASTTFYSKNQKKFAI----LHTGKKHQIRVSLSHLGFPIFGDEKYGGTRDKI----LYLHSFSLKF-----------------
>UniRef50_Q6DBR0(92-340:358) RNA pseudouridylate synthase domain-containing protein 4 n=5 Tax=Euteleostomi RepID=RUSD4_DANRE  E=3e-24 s/c=0.45 id=30% cov=91%
----------------LYEDQNIIAINKPYDVPLH--NINGIRNSIAECLpllakitdnMRPGSQLHLCHKLEKETTGVLILAKTEEAAEHVQTLIQSHKVEMKYLAITVGVPVPSEGVIDIPVIERAVVGPQPHFkmalsplfkVNEDGDgvtrvrahrqahAAVTRYQVLDNTS-GCSLVELQPLTGVKNQLRVHMAlALTCPILGDHKYshwsklapqklpegtlrrlGLVQSKTRYLPLHLHSRRIVLPGFKGHRDITVSCPLP-
>UniRef50_B8C9J1(96-280:280) Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C9J1_THAPS  E=5e-24 s/c=0.61 id=31% cov=79%
---------EHPPVQIVYEDNSLLIVDKPSTIAIH-TSGAYNYNSLFEILSYWNPqayglgRLFTVHRLDRLTSGLVLIAKTPELARSMGKCIMERDgCEKLYLTRVKGKFPLNVMEKVASDGgidaqnDNEHPHLTEEADRKGIKPAQTSFTLLTYDAvSDTSVVLAKPVTGRTHQIRLHLQQLGHPIANDHCY--------------------------------------
>UniRef50_D2VN10(121-309:314) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VN10_NAEGR   E=1e-23 s/c=0.59 id=27% cov=69%
--------PENIPLNILFEDDFLIVLDKPKFMTVHPSlkpkPRNTTGTLVNALLFHtngklstcgsceEHYRPGIVHRLDRDTSGIMVVAKDDETHLALKKLFENKnvgdennedKITRYYQALVENELNQSEGRIEIYIKRHHSMPSKREVTnnalETGAKLSITEYKEQKTFPVNnltgckvLTLVRCKLLTG------------------------------------------------------------
>UniRef50_C5L5W9(272-502:604) Ribosomal large subunit pseudouridine synthase D, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5L5W9_9ALVE  E=9e-22 s/c=0.45 id=28% cov=92%
---------------VLHRDADFIAINKPWGLSVTDGPKVKYSLQRHLRAFTSPSSSEvpiLIHRLDTATAGVQLLARHKSAATMARDRIGARSFwNRIYWVLVWGRvqlgPRQFSGTINIPLI-HRGHHVKPASFHTAELSAITRWEILKFspFAGGITLLKLEPYTGRRDQLQAHCAfGLRTPIVGDDVYSKEAIRwndAYPEKHMLqrkemfgeelickrmvCSRQIS-MHSFGGDQIDIIAPVP-
>UniRef50_Q47XX3(116-289:318) RNA pseudouridine synthase family protein n=2 Tax=Gammaproteobacteria RepID=Q47XX3_COLP3  E=2e-21 s/c=0.60 id=28% cov=75%
---------------------------KPYGMLSQGSKWSDHCTIarFAQQNLPNERPAFIVHRLDRAATGLIIVAHSKSAARALSHMFEHHQLEKHYQIIVHGDHRK-------------RAQPDIIDSDVDGKKARSTFTCLAYDEmTDQSLIKVKIDSGRKHQIRLHAASIAMPVVGDRLHGIADKDEQRN-LQLCAVSLRFVCP--------------
>UniRef50_B6KRF5(4753-5002:6535) RNA pseudouridine synthase domain containing protein n=5 Tax=Eukaryota RepID=B6KRF5_TOXGO  E=2e-21 s/c=0.42 id=29% cov=74%
-------------------------------------------------------ECGLCHRTDLETSGSLLIAKTRRARESIFEQFRKRLVHKEYLLLCHGRLDKLHARIDHPIAtrdfdssRSKSHFSEVVGPDEGGDEALTEYQVVRVFGvrqpvhrkiqaamsvaariasspssssssssapsdrargsgaaaagakaagsgkgspvsgtaakkdfsysQEFSFCRVRIHTGRTHQIRVHFRHIGHPLVGDTKYCDlykcTVDRSWCARMFLHSAVLEFDNPDKTETqhVRVVCPL--
>UniRef50_A9V182(13-244:289) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V182_MONBE   E=3e-21 s/c=0.45 id=28% cov=86%
---------------VIYEDNHLVALNKWRGLAVQDAAGSPSTVLSNVDVFQQNKDgfvPRLAHRLDQNTTGVLVLAKTAEAVLRLNRLFQLGAVAKTYEAVLAGQVTKPTGTLKGIpelITEEEDANSELTSNQPLFKtsaswshsTAQSHYTVLasaqvndgrpSRTKPWLTRVELRPTTGYKHQLRIQCAdGLRAPVLGDKRYGGGQEQvspiilQHLQRhglrtaahpyglvMHLHAKQLVIP----------------
>UniRef50_C4LG57(91-354:364) Pseudouridine synthase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LG57_CORK4  E=7e-21 s/c=0.39 id=28% cov=97%
-----YETPVPGHCTPVFSSPGILVVDKPPFLATMPrGRHITETATVRLRRATGNDNLVPAHRLDRPTSGLLLFTTHPRYRGPYQTLFARRQVRKTYQAIAPYHPVLAESTDRAEIEhvaidsgtisleddgihvhqRMEKTHGFIQARLEPGKPnAETVISSIRMLTDdderalregyhnwfgdplcdtRYALYTMHPLSGKTHQLRMCLNSLGVPIVGDQVYPRilpeaidahqHVDEAWHQPLCLRSTQLSWTDPNLHRPITVTAP---
>UniRef50_D2VYL5(155-352:464) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VYL5_NAEGR   E=2e-20 s/c=0.51 id=27% cov=75%
-------------IRVLYHDDEFLVIDKPSSIPVHPA-GRFVKNSLHYLLESALGRKlFLIHRLDKVTSGVLIHTWNAALAKSYQDTMKEGNVRKCYLAQVYGEFPEtenmsgehvllngqsfhkdkegfihvknkmvYKQNDWTFIWRaDSSENGSDSTDPKNTDTAYTLVKRIYYDPaSSRSIVIAIPITGRTHQIREHLRVMGYPIIND-----------------------------------------
>UniRef50_A6GFD8(78-327:401) Pseudouridine synthase, RluD n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFD8_9DELT  E=6e-20 s/c=0.40 id=28% cov=78%
-------------LEVLAETPDFVYVHKPAGVHTvalTPQQPGVLATAVAERWPecagasEDPREGGAVHRLDRPTSGVVAFARSPEIWARARKAFSAEQVRKRYLAVCldlgarergaamTWPPALPEGglrgwvlpaeveahpraelgslagidtatathpsfRVRAPLGRvaREAEIPSHTAVRLDGQRASSVVHPLAQAsatstGAQPWLLALELETGRRHQARCHLAWIGLPIVGDSLYG-------------------------------------
>UniRef50_Q4A6V6(68-260:281) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6V6_MYCS5  E=8e-20 s/c=0.51 id=26% cov=81%
-------------FQIIYEDANILIIDKKENLVIH-GEDNSLDNQVLSYLKHkqiDSFKPSHVGRLDKETSGLIVYAKNYLTLKQLNE--KSFNFKKVYQFKSDFLSSSPLELKLYFYKDENNKTKISKTQKENSKLAHS----IFYCENNKKF--AQIITGRKHQIRLSLAYLNKPI----YGDKKYKGKKSTRLMLHSYYLKF-----------------
>UniRef50_Q313X0(85-274:305) Pseudouridylate synthases 23S RNA-specific-like n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q313X0_DESDG  E=3e-19 s/c=0.51 id=26% cov=82%
--------------EVLCRTADYAAIFKPEGLHSARiaaSPAPSVEDQLDSLFAGETPPV-LVNRLDRPTSGMVLAAFGSHAAEAFRKFEQAGQVEKLYLAVVLGHMKAPVACRN---ELNMQNRQVTTVLPHEAQDPLRHTTVLplralpaeSMDGQKTTLVLAAIHRGARHQIRAHLAHAGHPIAGDCVYGSNQADGT---LYLHHFKI-------------------
>UniRef50_B8LDV9(281-501:590) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDV9_THAPS  E=1e-18 s/c=0.43 id=30% cov=77%
-------------IHILYQDDDLLIVSKPPGMVCYHNKKTSAGKITTSRKKKsraanngkddgsndggdgklmdisledalidmafplstvNPSARGIVHRLDRGTSGAIVLAKNDETHLRLVASFFLRKATKVYSALVPgSCLQNIDGDEDANVSAMLTIGSEGEIDLPvDRRPAKSKYRVVKMYGHQeeqtqqptpeAILLEVQTLTGRKHQVRVHCASgLGRPIFLDPLY--------------------------------------
>UniRef50_A4J3M3(58-203:309) Pseudouridine synthase n=167 Tax=Bacteria RepID=A4J3M3_DESRM   E=4e-18 s/c=0.64 id=22% cov=67%
-----------PPL----EKKVYLLMNKPRGYVTTLSD-ERDRKTVVDLLKGVEQRVYPVGRLDYDSEGLLLLTNDGELTQALTHP--KHKVKKTYLAKVDGIPE-----------TEELKAMAKGLVLEDGPTAPADVR-LAGTGDNRALLEISIHEGRNRQVRRMCEHIGYKVL-------------------------------------------
>UniRef50_Q750S3(6-190:260) Pseudouridylate synthase PUS5 n=1 Tax=Eremothecium gossypii RepID=PUS5_ASHGO  E=5e-17 s/c=0.49 id=25% cov=78%
--------------PILHEHKHYYIVNKVHGIVCQPPDLrtwykyhDYEPPVLLDLLRKQHPNfggevWRTVHRLDEPVTGGVLVSRNKRAAAMFSRS----------LALGGNRGFPLTRRYVALLAREAKGLPSEGRITMG--DMITDYKRLEND-----LVLLQLQTGRKHQIRKQMAQVfGQPVVNDKMYGGDSVDGIVDNLiGLHSAFIG------------------
>UniRef50_B8P3B5(60-229:348) Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P3B5_POSPM  E=9e-17 s/c=0.52 id=29% cov=71%
----------------LYVDRGLLLVNKPSGLVCQYNRKDDREqnahsdfNDFTDDLKRQLSLDAdllPLHRLDKATTGALAFALTHSHAQDLAEQFNAHTVKKSYLAIVRGGTASFPNRTGNIRGVLYTTNGRVSSEAQGQWEKraitETDWEVLASSPvAPLSLVRLSPFTGHKHQLRVHMAKI------------------------------------------------
>UniRef50_C4V2S0(65-202:290) Pseudouridine synthase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2S0_9FIRM  E=2e-16 s/c=0.64 id=23% cov=62%
-----------------------ILLHKPRGCLST-AYDDRGRRTVLDLLPHFPARLYPVGRLDADTEGLLIITNDGAMTQGLLHP--RFEIDKVYRA-----------EVTGNVTEDGLTALRNGILLDDGRTAPARLRVLHREGERT-VVETIIHEGRKRQVRRMFAAIGC----------------------------------------------
>UniRef50_B7FTR4(233-445:497) Predicted protein n=2 Tax=Bacillariophyta RepID=B7FTR4_PHATR   E=2e-16 s/c=0.41 id=23% cov=76%
----------------LYEDTTFIVVDKPPLLPTQPDSSNYVECcpgCVQDNLGPFTDIQGnevvrplLCHRVDSCVGGCVVLSKDGNGQKVFQEMQRERKLRKLYLAVTTQPVPLGMHLHWMwapqsargksggppcqlvshapPESRRKARQFWNRCVLEVVKCEPIKIgkedsHTYDPAGKVHYQSTIRLVTGRKHQVRAQLASLGAPIIRDSLY--------------------------------------
>UniRef50_C8WXC0(63-204:273) Pseudouridine synthase n=3 Tax=Firmicutes RepID=C8WXC0_ALIAD   E=4e-16 s/c=0.61 id=28% cov=64%
----------------------VLVLNKPVAYLSTVSDPLGRR-TVMQLLPPIRERVYPVGRLDYDTSGLLLFTNDGELTQRLLHP--SREIEKVYRV-----------SVRGIVDRETRRALMEGVELEDGVTAPAKVEVLRQAdrEDGVAVVHLAIHEGRNRQVRRMFERLGLPVL-------------------------------------------
>UniRef50_B3GZS7(37-191:232) Pseudouridine synthase n=10 Tax=Pasteurellaceae RepID=B3GZS7_ACTP7   E=4e-16 s/c=0.56 id=24% cov=70%
-----------------FEDTVVVLFNKPFDVLTQFTD-EQGRQTLKDFIP--IPQIYPVGRLDRDSEGLLLLTNNGEIQHRLANPKFEKQ--KTYLAQVEGIPQAADlakLEKGVELKDGLTKPAKAKAISAPNYEWQTAPKIRERKTIPTSWIELKIHEGKNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_C5YIB1(182-335:439) Putative uncharacterized protein Sb07g027030 n=1 Tax=Sorghum bicolor RepID=C5YIB1_SORBI  E=5e-16 s/c=0.56 id=31% cov=67%
---------------VIHRDSAILVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGNKEGPK-----------LTWNKACEAYVQK----------YWALVIGTPKEREGVICAPISKVLLDDGKAERVilahpsgIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAeALGTPIVGDYKYG-------------------------------------
>UniRef50_B6AH65(132-390:527) RNA pseudouridylate synthase family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AH65_9CRYT  E=1e-15 s/c=0.33 id=31% cov=75%
---------------ILYNNKHFLAVYKPYGIPCHP-QGRFHKLSLTNIVMSKYFRSeteviidnkaasriinddklyaHPINRLDRVTSGLVILSKNCDSTRLLSKVISKSH--KYYLAHVEGDFSSLEHVDIGKLFKSTqlvkiqnlemglninfgikceapleiikdrvGDSLMTKVSFENGKSALTWFFPLKIEylsqedrkkikldqvnfesinicHKPNSYVLCKPVTGRTHQIRAHLQYLGFPVTLDHLY--------------------------------------
>UniRef50_B2RK43(249-419:439) Pseudouridine synthase n=1 Tax=Porphyromonas gingivalis ATCC 33277 RepID=B2RK43_PORG3  E=4e-15 s/c=0.49 id=21% cov=74%
--------------EVIYKDKRveieskvYVLLNKPKNCVTT-SDDPECRTTVMDIVRYACPeRIYPVGRLDRNTTGVLLITNDGDLASKLTHPSFKK--KKIYHV-----------WLNKDVSIEDMQKIADGVELDDGEIHADA--ISYVKEDDLSQVGIEIHSGRNRIVRRLFEHLGYRVVKlDRVYFAGLTKKNLPR---------------------------
>UniRef50_C1E520(58-333:372) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E520_9CHLO   E=4e-15 s/c=0.30 id=26% cov=86%
---------------VLYVDprARFFVVNKPAGMYVenvldfierymeevrraperhserskrakTCSDGATSIREAFDSLAKVGERFQLLHRLDRDTTGCLGIACDKETNRILSRAFQEGRVKKHYVAHcintkfaddfqkkwkdwevdepfedgsramtWPQRFCNFRLECHTGHGRSKHGLWRLYAKEDVGRELPGGSKVKEARTNlyrgfdsdsdskrlahlrelQSFPVVAEPITGRTHQIRMHCSQY-FPIVGDYKYGYDDtadddvvQEEREKGYRLHSFSLELP----------------
>UniRef50_B2V6W2(54-204:244) Pseudouridine synthase n=5 Tax=Bacteria RepID=B2V6W2_SULSY   E=6e-15 s/c=0.55 id=22% cov=68%
--------------EILYKENHYFMLNKPAGYIT--ATEDEEYPTVLDLFSDLPiaSKLFPVGRLDIDTEGLLILTTDGQFGHRLSHP--KWNIEKEYYAIVEGDISN--------IDFSESENKGIYLKKEKYQTKPFKVKVLNTSKDK-SEILITLTEGKYHIVKRIMQELGYPVL-------------------------------------------
>UniRef50_C8WGQ8(74-243:282) Pseudouridine synthase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGQ8_EGGLE  E=9e-15 s/c=0.49 id=24% cov=69%
-----------------------IMLHKPAGFVTTMSDPQGRRTVAELVPTERYPGLFPIGRLDFDTTGLLLFSTDGELGNGLLHP--KHHVTKRYLACVEGRPTERDlaLLRRGIELDDGPTQPADVRVVEGGAARHAERlleipaavpprsskeyaAVCEGRATRRSIVRLGIREGRKRQVKRMLAAVGHPVL-------------------------------------------
>UniRef50_C8WAL4(65-228:279) Pseudouridine synthase n=7 Tax=Coriobacteriaceae RepID=C8WAL4_ATOPD   E=2e-14 s/c=0.50 id=29% cov=64%
-----------------------LMLNKPAGYLTTMKDPQGRPTIVDMVPTDTYPGLFPVGRLDMDTTGLLFFTTDGQMAQELLHP--SKHVWKHYVAHVVGTPTE-----------EQLNRLREGIELEDGPAAPAEVEIISDDvkmknllapqglgktggGEPNALVSVTIREGRKHQVKKMLLAIHHRVL-------------------------------------------
>UniRef50_C3JBA6(284-439:459) Pseudouridine synthase n=2 Tax=Bacteria RepID=C3JBA6_9PORP   E=5e-14 s/c=0.51 id=21% cov=71%
-----------------------VLLNKPRNCVTTSSDPEKRLTAIDLVRNACNERIYPVGRLDRNTTGLLLLTNDGDLAAKLMHPKYEK--KKIYQV-----------TLDKPVSVEHMQQIASGIELEDGEIHADA--ISYVDENNLAIVGIEIHSGRNRIVRRIFKHLGYRVYKlDRVYFAGLTKKDLPR---------------------------
>UniRef50_Q1QUR9(62-210:257) Ribosomal large subunit pseudouridine synthase E n=26 Tax=Bacteria RepID=Q1QUR9_CHRSD  E=1e-13 s/c=0.53 id=27% cov=55%
----------------------------------------------------DVPDIYPAGRLDYDSEGLLLLTGDGALAHRISHP--RHKQPKTYWVQVEGEPEPAalQALRQGVTLRDGPTRPAKVRRLESPDVAPRHPPVRHREAVPTAWLELTLSEGRNRQVRRMTAHVGHP---------------------------------------------
>UniRef50_B7L2Z9(86-258:320) Pseudouridine synthase n=4 Tax=Rhizobiales RepID=B7L2Z9_METC4   E=1e-13 s/c=0.46 id=22% cov=61%
-----------------------LLLNKPRGLLTTYGDPQGRKTVYDCLAGHDLPFLAPVGRLDCASEGLLLMTNDTRWAHRLLDPASN--VDKVYHVQIDRRPDEALLT-----------GLREGVAHDGERLAAKSVAPL-RVGERNAWLEVVLSEGRNRQIRRMMA--------------------------------------------------
>UniRef50_Q5A0Y2(1-221:247) Pseudouridylate synthase PUS5 n=4 Tax=Candida RepID=PUS5_CANAL   E=1e-13 s/c=0.35 id=24% cov=73%
---------------------NYAVVNKPSGMVCDASHTNNIITALTNEFTKILPsvnssQFRLVQRLDRFVTGGLVVARNKKWADKVRKSfFQEGTLRltRRYVGLIalDQIPESTQGTIDFPIqalekdyrGKNKSRELFTYSAVTHYKLIPSARRTIKgvfpvFQQGPILPIILELETGRKNQIRDHiIQKFGVPLLNDD----------------------------------------
>UniRef50_A3BN26-2(130-317:400) Isoform 2 of RNA pseudourine synthase 6, chloroplastic n=2 Tax=Poaceae RepID=A3BN26-2  E=3e-13 s/c=0.41 id=22% cov=74%
--------------------DNYVVLDKPAATSVGGATDNIEESCVVftSRALGLETPLMTTHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVNKRYLALTTAPVSTGIITHymrpinRAPRLVSEDHIKGWHVCQMEildckkvPWPSSLIRKVHKVDNcgwpqqEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAY--------------------------------------
>UniRef50_C1EHD0(184-468:481) RNA pseudouridylate synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1EHD0_9CHLO  E=3e-13 s/c=0.27 id=32% cov=77%
---------------VVHEDDAILVVNKPHRLPSmaHESNGVEHCAGCLERSLGLSPSTlRVTHRLDSSTSGVLVLGKTATAVREFNDSVAKtpgsKEIVKSYAALVYAKHAVPLGLMTHWMYPGPfgpgafhgrtlrRSRARLVRSSADGergddtggqgtgkRWKRCELRVVSCDratqsqvdtwrtlfdrelerarkpfdggaddplvsggdspggdspGASVWAVRVELVTGRTHQVRAQLAAAGAPLLGDSLYA-------------------------------------
>UniRef50_Q2S2G3(71-211:249) Pseudouridine synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2G3_SALRD  E=4e-13 s/c=0.55 id=29% cov=48%
--------------------------------------------------------LFPVGRLDRNTTGVLLVSNDGDLAHRLMHP--RYEIPKIYYVRVQDDVKPHQ-----------LDQLKRGVELSDG--AAAADQVAYLDPQRKTDIALELHEGRNRQIRRMMEALGHTIV-------------------------------------------
>UniRef50_B0MSS4(277-431:451) Pseudouridine synthase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MSS4_9BACT  E=5e-13 s/c=0.50 id=22% cov=62%
-----------------------LVLNKPKGYVTSLDDPHADKTVMELVKDACTERIYPVGRLDKNSVGLLLFTNDGDLTRQLTHPSFQK--KKIYQV-----------SLDKPLTKADMEQIAQGITLEDGEIYADE---IAYVKEDKTEVGIEIHSGRNRIVRRIFEHLGY----------------------------------------------
>UniRef50_A3YG85(4-152:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=A3YG85_9GAMM  E=6e-13 s/c=0.51 id=22% cov=68%
----------------------IIVFNKPFQVLSQFTT-DEEKATLSSFI--DKANFYPAGRLDYDSEGLLLLTDHGALQHLIASP--QHKMPKTYLVQVEGELTKEAVEQlrVGVELKDGLTKPAEAKIASDFEPWPRHPPIRERKNIPTSWLELTITEGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_D2V6I3(131-251:279) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V6I3_NAEGR   E=9e-13 s/c=0.63 id=31% cov=47%
-------------LEIIKEENDFVVVTKPPGICVHPIK-RYHKNSLFYMLEHEYAHHFgndlhckTIHRLDKETCGVLIVGKTSEGAKYFQKLLKEKQVEKQYIARVDGIVKgKPQFEINDPLVC------------------------------------------------------------------------------------------------------
>UniRef50_B8LBG7(230-481:536) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBG7_THAPS  E=1e-12 s/c=0.30 id=22% cov=82%
----------------VYVDDDLgfTVLNKPGGIPTHSTISNHAEDVVSMYRAslkeergdeAHTPHVSIPIRMEPEMYGLTLASTKKEFCAYITKQLAASKelhdenssngnsipVKKSYRVLVCIKnpddidriekmvgktlehyvdpvsPTPKKFVRNKPKSSNHDWQQCLMLITSVGDTKFRAACVSSKYTDSndftlahrlwcpdmdhpaedlgvsyVMQLELELLTAKPHQIRGQLAALGCPIVGDTPYGGGTCEMRMHRHM-------------------------
>UniRef50_Q2LSY4(61-203:251) Pseudouridine synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSY4_SYNAS  E=2e-12 s/c=0.52 id=22% cov=62%
-----------------------VMLNKPRGYVTALSDPQK-RPLVIHLLPELGVRLFPVGRLDYDSEGLLLLTNDGGFAQRVQHP--RYRISKTYRVKISGRLNAAEF-----------NRLQKGLELEDGKFAPDEVA-LEEINPKSSWLTMKISEGRNRVIRRAFEQLGH----------------------------------------------
>UniRef50_Q9HX48(5-159:189) Ribosomal large subunit pseudouridine synthase E n=30 Tax=Proteobacteria RepID=RLUE_PSEAE  E=2e-12 s/c=0.48 id=22% cov=70%
-------PPSEPKL---------LLFNKPFDVLTQFND-EQGRSTLKDFIP--VPGVYPAGRLDRDSEGLLLLTNDGRLQARIADP--RHKLPKTYWVQVEGTPDEEQLRrlREGVTLNDGPTLPAEARLLDEPTLWERVPPVRFRKSVPTHWLELVIREGRNRQVRRMTAAVGLP---------------------------------------------
>UniRef50_Q9SVS0(210-397:472) RNA pseudourine synthase 6, chloroplastic n=8 Tax=Embryophyta RepID=PUS6_ARATH  E=2e-12 s/c=0.40 id=23% cov=73%
--------------------DSYVILDKPAGTTVggTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLP--IGIISHYMRPKNMAPRLVAEDSIQGWHlcqlevleckkipwpdAATEKKhdiedCGWTSKEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMY--------------------------------------
>UniRef50_D1Y0J0(380-518:555) Pseudouridine synthase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0J0_9BACT  E=3e-12 s/c=0.53 id=26% cov=23%
-----------------------VLLNKPKDYVTT-SDDPQQRKTVMDLVKDACPeRIYPVGRLDRNTTGVLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q55578(66-220:249) Uncharacterized RNA pseudouridine synthase slr0361 n=21 Tax=Cyanobacteria RepID=Y361_SYNY3  E=4e-12 s/c=0.48 id=21% cov=59%
-----------------------LLVNKPRDVLST-CDDPRGRKTVLDLLPQDLQRGkglHPVGRLDRNSTGALLLTNDGELTLRLTHP--RYHLPKTYDVWLEGNPSD-----------EDLEKWRSGMMLDGKKTLPATLEVISENKDQIHLL-VTLTEGRNRQIRR-----------------------------------------------------
>UniRef50_B0N6F1(58-201:241) Pseudouridine synthase n=3 Tax=Bacteria RepID=B0N6F1_9FIRM   E=4e-12 s/c=0.51 id=21% cov=66%
------------------ENKVYYVFYKPKGCVCTL-DDEFDRPIITDYFTEVKERIYPVGRLDFDTTGLIIMSNDGEFANMIMHPRS--HLEKIYEV-------SIKGLITGP----TLNKLEKGVYLEGVKTLPCKIKVVDKDTEHkTTMLKIKLVEGKNRQVKKMFESVGHPV--------------------------------------------
>UniRef50_B9XS61(63-197:235) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XS61_9BACT  E=5e-12 s/c=0.54 id=19% cov=59%
-----------------------VALNKPRGYVCSR-KDDRKRKVIGDLLPAEWDNLYSVGRLDSDSEGLIFLTNDGEFSLHLTHP--RYRVLKKYLA-----------TVEGRVEQEMLQRFKHGIVHEGEKLKVDRARTLSV-QNSTSLVELELTEGKNREIRR-----------------------------------------------------
>UniRef50_A1ZI67(219-356:391) Pseudouridine synthase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZI67_9SPHI  E=5e-12 s/c=0.53 id=23% cov=41%
-------------------------------------------------------RIYPVGRLDRNTTGLLLFTNDGEVAKKLSHP--SHDVKKVYQV-----------ELDKPLKDEDLDSIAEGVILEDGYAAVDEIAIL---NPERTLVGVEIHIGR-----------------------------------------------------------
>UniRef50_Q8I3Z1(7074-7174:10061) MATH and LRR domain-containing protein PFE0570w n=35 Tax=Eukaryota RepID=MLRR1_PLAF7  E=3e-07 s/c=0.57 id=31% cov=41%
-------------------------------------------------------ECGLCHRIDLETSGSLIIAKTKEAREFLFDQFRKRNVYKEYILLCHGRIKKKKGFINKSIQTHEYNNFHSKshfslVVKTGGTDAYTEYNCVK----------------------------------------------------------------------------
>UniRef50_C4XSY8(64-214:322) Pseudouridine synthase n=11 Tax=Desulfovibrionales RepID=C4XSY8_DESMR  E=6e-12 s/c=0.48 id=19% cov=63%
-----------------------LALHKKPGVVTT-ASDPEGRPTVFDGLPEvwRGKRLFPVGRLDFFSEGLLLLTTDGELALRLTHP--RWHVPKRYRVTVRGQVTPDML----------GTMARGMRLAEGERLAPVAARVVEGPAQDRSILEMELHQGVNRQIRRMCRDLG-----------------------------------------------
>UniRef50_A3ZQL4(78-215:517) Pseudouridine synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQL4_9PLAN  E=9e-12 s/c=0.53 id=26% cov=62%
-------------------------LNKPPGVLST-NFDPAGRTRVIDMVPQDV-RLFTIGRLDRASEGLIVVTNDGELANRLAHP--RYEIEKTYRVEVAGHPEP-----------DAITFVRRGVHLAEGFVQPVSV-VMKRKNKQSTTLEVILDEGKNREIRRLMAKIGHKVL-------------------------------------------
>UniRef50_B2ULL1(2-153:188) Pseudouridine synthase n=4 Tax=Bacteria RepID=B2ULL1_AKKM8   E=2e-11 s/c=0.47 id=21% cov=68%
----------------------ILAFNKPYGILSQFTKEAPHHRTLAEF--GFPPGVYPVGRLDADSEGLLLLSDEKGLADRLLNPSGRH--PRTYWSQVEGTPSETDLRPlelgGLRIRGHCTLPCRARLMRREPDVPPRIPPVRYRASIPTSWLELTLVEGKNRQVRRMTAAIGFP---------------------------------------------
>UniRef50_A4CJ52(126-268:303) Pseudouridine synthase n=5 Tax=cellular organisms RepID=A4CJ52_9FLAO  E=2e-11 s/c=0.50 id=20% cov=65%
------------------ERKEYVLLNKPRNFITT-TRDEKGRRTVMELIsRASNARLVPVGRLDRNTTGLLLFTNDGELAKKLTHP--KHGVRKIYHVELDKTFKSA-----------DLGKLREGLELEDGRIEVDEASYIDGASKK--EVGVELHSGRNRIVRRIFEHLGYQVV-------------------------------------------
>UniRef50_A7VSS7(67-202:256) Pseudouridine synthase n=2 Tax=Clostridiales RepID=A7VSS7_9CLOT   E=3e-11 s/c=0.52 id=24% cov=21%
--------------------------NKPAGVVS--ASRDSREKTVVDLVPPVLSRRdlFPAGRLDRDTTGLLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q04T62(65-213:244) Pseudouridine synthase n=4 Tax=Leptospira RepID=Q04T62_LEPBJ   E=1e-10 s/c=0.46 id=27% cov=23%
----------------------ILILNKPVGYLCSHGD-RFHEKTVFSLLPLTYKNFKIAGRLDLNSRGLLIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A3M7K0(3-152:262) Pseudouridine synthase n=13 Tax=Acinetobacter RepID=A3M7K0_ACIBT   E=1e-10 s/c=0.46 id=22% cov=68%
----------------------IVILNKPYDVLSQFRKDEAHM-TVSDFV--DDPTLRIAGRLDMDSEGLVFLTDHGGLNQFITNPANKK--YKTYLVQVDGDVTEealEQLRKGVELNDGMTLPAKAIKVSEPEWLWDRDPPVRYRASIPTSWIEISICEGRNRQVRRMTSAVGFP---------------------------------------------
>UniRef50_B2TQQ1(54-220:264) Pseudouridine synthase n=8 Tax=Clostridium RepID=B2TQQ1_CLOBB   E=1e-10 s/c=0.41 id=25% cov=31%
-------------------------FNKPSGCIT--ATKDNIHRTVFDYFDEDMNGVFHVGRLDKDTEGLLLLTNDGEFEHKVMHP--EKHVEKTY---------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q4TBL2(10-173:220) Chromosome undetermined SCAF7118, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TBL2_TETNG  E=2e-10 s/c=0.42 id=28% cov=68%
-------------LRVLYHSHDYVVVDKHWDLR-IDSKMWYEKLTVQAQLQASFPPAGRPQHL-----------------LRFQVLSPVGFLDKWS---SLCCPQQSCCWPGVPLLQGPHRHQSlPRLSCEKPKTCRSELAVLEyglYDGEPVTKALLQPLTGRTHQLRVHCSAIGHPIVGDVTY--------------------------------------
>UniRef50_C2KV26(47-196:239) Pseudouridylate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KV26_9FIRM  E=2e-10 s/c=0.46 id=21% cov=62%
--------------EIVYKDEpihyeefSYYMMNKPVGVLS--STEDRKQKTVLDLFSdKHRKDLFPVGRLDKDSEGLLLIMNDGALAHKLLSP--KMHIEKKYLV-----------EIPGKISEEELDRLRQGIQYDTDLIAMPAKARCLSSTEEGSRVEVIIMEGKFHQI-------------------------------------------------------
>UniRef50_A5EVQ2(60-216:266) Pseudouridine synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVQ2_DICNV  E=2e-10 s/c=0.43 id=21% cov=38%
----------------------ILMYHKPAGEICTRKDPEGRVSVFQHLPKISHGRWVAIGRLDLNTSGLLLFTNDGALANQLMHPSAE--IEREYWVRVAGEVTEE----------------------------------------------------------------------------------------------------------------
>UniRef50_A5TWE7(59-200:234) Pseudouridine synthase n=10 Tax=Fusobacterium RepID=A5TWE7_FUSNP   E=2e-10 s/c=0.48 id=23% cov=58%
-------------------------LNKPLEVLS-SSSDDRGRKTVVDLIKTD-KRIFPIGRLDYMTSGLILLTNDGELFNRVVHP--KSEIYKKY-----------YIKILGELKKEEIDELKKGVLLDDGKTLPAKISGIKYDKNKTSMF-ISIREGRNRQIRR-----------------------------------------------------
>UniRef50_A8S8D3(61-198:233) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D3_9FIRM  E=3e-10 s/c=0.49 id=22% cov=57%
-----------------------LMLNKPEGVVS--ASTDKRDTTVVDLVGDAYPRRelFPAGRLDKTSTGFVLLTDDGGFAHDILSP--RHHVSKTYTV-----------TIDTPLTQEMCTGFAAGVTLADG-TALSPAEVTALSPDGLT-VRVVLRQGVYHQI-------------------------------------------------------
>UniRef50_C8PVP6(4-163:234) RNA pseudouridine synthase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVP6_9GAMM  E=5e-10 s/c=0.42 id=17% cov=70%
----------------------LILFNKPYGVLSQfRSDDNNNFATLSDYFTD--KSLRVAGRLDATSEGLLLLTADGQVNKALTHPPKAnagKQQGKTYWiqVEGDASDAQLQQLQTGVPLKDGITLPAEVVRLSEAQIAEHIWQASDKIAKRkvTTWLAITIFEGKNRQVRRMAAHVGLPCL-------------------------------------------
>UniRef50_UPI0001745DB4(41-172:345) ribosomal large subunit pseudouridine synthase B n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DB4  E=6e-10 s/c=0.50 id=20% cov=38%
----------------------VIVLHKPRGLVCSR-RDERDRDTIYSLLPEKFHTLHHVGRLDKESEGLLLMTNRGEVSQRLLHP--SQGVEKEYEVILETRFDPE----------------------------------------------------------------------------------------------------------------
>UniRef50_Q6FCZ3(3-152:264) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q6FCZ3_ACIAD  E=6e-10 s/c=0.44 id=21% cov=68%
----------------------IVVFNKPYDVLSQFREDSAHL-TVSSFIAD--PELRIAGRLDLDSEGLMFLTDHGGLNQYITHPSNKK--YKTYLVQVDGDITEDaleKLRKGVELADGLTLPAQATKVEEPEWLWERNPPVRFRASIPTSWVEISICEGRNRQVRRMTATVGFP---------------------------------------------
>UniRef50_D0U645(66-200:237) Pseudouridine synthase n=1 Tax=uncultured actinobacterium RepID=D0U645_9ACTN  E=6e-10 s/c=0.49 id=22% cov=60%
-----------------------LALHKPKGVLSTMFD-PEGRPSLDDFIDLRKERLFHVGRLDKDSEGLILLTNDGDLTFRATHP--SFGLEKTYI-----------IEFDGILPTGVDKVLLKGVELEDGM-----GRVLTFKQLSPKWIEVSIHEGRYHIIRRLMEAVG-----------------------------------------------
>UniRef50_C5KUW6(3-171:182) Ribosomal large subunit pseudouridine synthase B, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUW6_9ALVE  E=7e-10 s/c=0.39 id=21% cov=71%
-----------PSLDIdqclsdgsIHASPCLFAFFKPRGMETTCTAGSGLRKFL------DRGRLHPVGRLDRDTTGLLLLSSDGDCTNRILHS----TINKTYAALVRGVLPEGLMKKVVSEGVDLPDGHVDVTRLEtinDGDTVPfglVAYPLSSIPTNGCSMVRITTTCGRNRVVRRTLCALGHPVL-------------------------------------------
>UniRef50_C7NBL1(46-218:252) Pseudouridine synthase n=3 Tax=Leptotrichia RepID=C7NBL1_LEPBD   E=9e-10 s/c=0.38 id=31% cov=22%
-----------------------IMMNKPAGVIS--ATEDSHHKTVIDLLNDEYrtYDIFPVGRLDIDTEGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B5INL2(16-167:243) Ribosomal large subunit pseudouridine synthase E n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5INL2_9CHRO  E=1e-09 s/c=0.43 id=19% cov=54%
------------------------------------------------------PGVYAAGRLDADSEGLLLLTANGRLQQRLTDPAFGHW--RTYWVQVEgeagQRPEALQQLRQGVVIQGRLTRPALVRCLSDPKLPERDPPIRQRATIPVSWLELQLQEGRNRQVRRMTARVGLP---------------------------------------------
>UniRef50_B5JTN5(87-249:256) Pseudouridylate synthase, 23S RNA-specific n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTN5_9GAMM  E=2e-09 s/c=0.40 id=25% cov=54%
--------------------------------------------------------------------GIVLVAHNRRAAADLSALEEAGKITRHYRleVLGETPPSGSINEHSEYRRIDYLTAL------------------------NASVLAVQSTRGTEDPLRERLAAMGHPVLGDDVYGRQDYR---DHLHLKGVGLAFTCPFSGESVHF------
>UniRef50_C6W5I1(4-158:201) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W5I1_DYAFD  E=2e-09 s/c=0.42 id=18% cov=68%
-------------------------IYKPFNMLSQFSREGDHQ-TLADLGFTFAKDIYPVGRLDADSEGLLLLTNDNFLKTKLLEP-RNRHTRTYYVQVEGEVTDEACrqlsaGVSISINGKQYKTLPAEIAKIAEPELPERNPPIRFRKNIPTSWLSVTLREGKNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q4FV02(6-171:208) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=Q4FV02_PSYA2   E=3e-09 s/c=0.39 id=18% cov=70%
----------------------LILFNKPYGVQSQFRDDSNNDHTTLSEYFTD-KSLRIAGRLDATSEGLLILTSDGRINKAITQPPSAKNFaqnkqkqGKTYLVQVEGVVTAVQLkeLASGVILKDGKTLPASATLLDEADLPITLWQrdppIRERKNIPTSWLMLTIYEGKNRQVRRMTAHVGLPCL-------------------------------------------
>UniRef50_Q3AI58(19-171:230) Pseudouridine synthase n=5 Tax=Cyanobacteria RepID=Q3AI58_SYNSC   E=3e-09 s/c=0.42 id=21% cov=68%
-----------------------LLLNKPYGVLSQFTSEEGSRWRCLSDFV-DVPQVYAAGRLDADSEGLLILTSNGRLQQRLTDPRFGHW--RSYWAQVEGTPNTEQLQQLCDgvvvqGRRTLPAKARWLQGQDLPQLPERTPQIRFRAAIPTNWLQLSLSEGRNRQVRRMTAAVGLP---------------------------------------------
>UniRef50_Q8X4Q8(69-226:290) Ribosomal large subunit pseudouridine synthase B n=117 Tax=Bacteria RepID=RLUB_ECO57  E=5e-09 s/c=0.40 id=30% cov=21%
-----------------------------------------------------------VGRLDVNTCGLLLFTTDGELANRLMHP--SREVEREYAVRVFGQVDDA----------------------------------------------------------------------------------------------------------------
>UniRef50_C8PTK2(64-210:246) Pseudouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTK2_9SPIO  E=1e-08 s/c=0.42 id=24% cov=22%
-----------------------LMLNKPAGVVT--STADPLHSTVMELLPPPFPAMelFPIGRLDLDTEGLLII--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1LJQ9(64-200:238) Pseudouridine synthase n=3 Tax=Burkholderiales RepID=Q1LJQ9_RALME   E=2e-08 s/c=0.45 id=19% cov=45%
-----------------------------------------------------------VGRLDHDTTGLLLLTDDGQFIHAQTSP--KKQVPKIYEV-----------TTFDPVTPEQVEALRTGVKLDD-EPAPIAADACEATGERS--LRLTLLQGKYHQVKRMVAAVG-----------------------------------------------
>UniRef50_Q5WE78(54-197:243) Pseudouridine synthase n=10 Tax=Firmicutes RepID=Q5WE78_BACSK   E=2e-08 s/c=0.43 id=26% cov=64%
--------------PVRYKAELYLMLNKPAGVVT--ATEDARQKTVLDLMKNEWGHMkpFPVGRLDKDTTGLLLLTTDGAFSHELMAP--KKHIAKEYRALVEGKVTQADVE-----------AFKNGVVLDDGyctKPAQLEIE----ESGPLSAISLELTEGKFHQVKRMFAAVG-----------------------------------------------
>UniRef50_C9RMB6(88-260:286) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMB6_FIBSS  E=3e-08 s/c=0.35 id=23% cov=65%
--------------------------NKPRGYVTT-ASDEKGRATVMDLFREQYakmfpgkpvPHISPVGRLDAASEGLLLFTNDTQWADALLKTKDERRKtrddkcveresrgpihTKIYRVQVNGHPTAEELSQM-----EAGFNVPPRVFGEPEEFMHAVSAKLYSAGEKNCWLEITLDEGKNREIRRMLAKLGY----------------------------------------------
>UniRef50_C0ACE6(84-218:253) Pseudouridine synthase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ACE6_9BACT  E=3e-08 s/c=0.45 id=21% cov=61%
----------------------LLMLHKPTGFVCSHDerEGPRVYDLLPPRWRARNPQVTSIGRLDKDTSGLLILTDRTELVHTYTSP--RHKVPKLYRA-----------TLDRDVPASLVDLFAAGTLQLDGEKAPCAPATLRLPAPRVA--ELVLVEGKYHQVRRMFAA-------------------------------------------------
>UniRef50_B7J5G3(70-212:251) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B7J5G3_ACIF2   E=3e-08 s/c=0.42 id=21% cov=61%
-----------------------LLYHKPLGKVCAHDDPRAIYQDFPLRWRYRRPALSSVGRLDRETSGVLLLTDDGDWLHHWTSP--RRAIPRVYRV-----------TLQEPLRSDAADILAAGTLMLDGEDTPCRPAALHCLTER--EVRLTLTEGRYHEVRRMFAAL------------------------------------------------
>UniRef50_Q3J464(61-203:508) Pseudouridine synthase n=15 Tax=Bacteria RepID=Q3J464_RHOS4   E=4e-08 s/c=0.42 id=24% cov=66%
-----LAPPEP---------ARLWLYYKPEGLVT-SASDEKGRETVFDHLPEGMPRVMSVGRLDLNSEGLLLLTNDGELKRRL-ELPSTGWLRK-YRVRVKGNPT------------DADLEPLRKGITVEGESFQPMTVSLDRVQGANAWLTVGLREGKNREIRRAMSALG-----------------------------------------------
>UniRef50_Q0F269(95-242:289) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F269_9PROT  E=4e-08 s/c=0.41 id=25% cov=68%
-----LVEPQQGHTYILY--------NKPKGQLC--SRLDKKKRPLIYDFIDVAPNVQSIGRLDMDTEGLLMLTDDGALTRALTHPAAK--VPREYRARVAGIVE----------LETLAKLRRGGMDIGRGDTSDAWEVTVDSESAGHTWLNIIILRGRWREVRRTLEECGHPV--------------------------------------------
>UniRef50_A7HJ21(67-223:265) Pseudouridine synthase n=3 Tax=Thermotogaceae RepID=A7HJ21_FERNB   E=5e-08 s/c=0.38 id=19% cov=66%
------------------EDDNVLvdgkilkpnqfeyyVLHKPKDYVTTLFD-PKQKKTIGELIKHIKTPLKPAGRLDKDATGVLILTNDGELIDILTNA--KYRVKKEYIVKVKSVVSA-----------EELVKLKKGIYDKGEFLKLEHFKIIEKSSE-YSIVRVELIKGKKHEIKRLFSSIGHNVL-------------------------------------------
>UniRef50_Q6LQS3(87-221:240) Pseudouridine synthase n=1 Tax=Photobacterium profundum RepID=Q6LQS3_PHOPR  E=6e-08 s/c=0.44 id=27% cov=25%
------------------QDNNpvYIVLNKPKGVVS-ATKDIKHSTVLDLIQHSQKNELHIVGRLDFNTTGLVLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B6BUN1(79-236:257) Pseudouridine synthase n=1 Tax=beta proteobacterium KB13 RepID=B6BUN1_9PROT  E=8e-08 s/c=0.38 id=16% cov=33%
----------------------LIIYHKPEGEIVSHSDPKHQKTVFQKLPKVKNGKWISIGRLDINTSGLLLITNDGKLANHMMHP--SQQIDREY---------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6EPE0(48-220:291) Pseudouridine synthase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EPE0_9BACT  E=8e-08 s/c=0.34 id=21% cov=24%
------------------ENNNLvyIILNKPVGITCT--TDLRVEGNVVDYI-DHKERIFHVGRLDKPSEGLLLM--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C0BLA3(157-319:334) Pseudouridine synthase n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLA3_9BACT  E=8e-08 s/c=0.37 id=19% cov=36%
------------------EKRAYILLNKPKDFDSSATDASQPKSALGLVANATKSKIKPVGRLDKSASGLLLFTNDGELQTKLTKP--KNGFRKIYHA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_P42395(43-206:257) Ribosomal large subunit pseudouridine synthase B n=5 Tax=Buchnera aphidicola RepID=RLUB_BUCAP  E=9e-08 s/c=0.36 id=22% cov=23%
-----------------------LIYNKPIGEVCTRDDFQKRLTVFDKLPKLNLNRWVSVGRLDINTKGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q1H048(84-230:383) Pseudouridine synthase n=4 Tax=Betaproteobacteria RepID=Q1H048_METFK  E=1e-07 s/c=0.40 id=33% cov=26%
--------PFEPELP------QVLLYHKPEGeIVSH--DDPENRASVFDKLPRiRNGKWIAIGRLDMNTSGLLIF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6J9Y4(74-204:323) Pseudouridine synthase n=2 Tax=Clostridiales RepID=C6J9Y4_9FIRM   E=1e-07 s/c=0.45 id=20% cov=23%
----------------------LLLFNKPRGIVC-STKQQFDETTVTDYL-DYPLRVYPVGRLDKESQGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B0SBU8(50-199:243) Pseudouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SBU8_LEPBA  E=1e-07 s/c=0.39 id=18% cov=37%
---------------VVYYDEtlnrkefYYFMMNKAPDCIT--ATEDPREKTVMDYLseRHRNMNLFPIGRLDKETEGLLLFTTDGTLAHYYTSP--KHFVEKEYYA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q11WC7(30-199:224) Pseudouridine synthase n=2 Tax=Sphingobacteriales RepID=Q11WC7_CYTH3  E=1e-07 s/c=0.35 id=18% cov=63%
------------------------IINKPFNMVSQF--ISSDAVNLLGNLDFTFPEgTHAVGRLDNESEGLLILTTNKKVTRLLFQGTKKHT--RTYLVLVKNKVSEETLKQLQTGISIRVKGGGNYISSPCEASIVTDAKAIYSYAADTrenyphTWLLLTLTEGKFHQVR------------------------------------------------------
>UniRef50_B1X5I1(61-206:242) Pseudouridine synthase, Rsu n=1 Tax=Paulinella chromatophora RepID=B1X5I1_PAUCH  E=2e-07 s/c=0.40 id=21% cov=65%
-------------------DNHVtLLINKPTGVIS-SCQDPQGRPTILDLIPQsilQNRKLHPIGRLDSNSRGALILTTDGSLTMNLSHPRYSH--DKAYKVWVEGRPSSSVI-----------KIWQQGIFLDKKMTSRVELKILCKRVTST-LLEIVMKEGRKRQIRRTATFLGHPVI-------------------------------------------
>UniRef50_A8SLU4(42-196:230) Pseudouridine synthase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLU4_9FIRM  E=2e-07 s/c=0.38 id=20% cov=59%
------------------ENDEVLVegkkikleeakkyylLNKPIGYSST-AKAQFQEKIVLDLI-DSKERIYPVGRLDKDSFGLLLLTNDGDLAFRLTHP--SHNVEKEYIVKVDKT-----------LKESDLKKLSSGIMLEGKITRKARFEMLDFKSN---IVKVFLKEGRNRQIR------------------------------------------------------
>UniRef50_C5KFD0(198-262:262) Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KFD0_9ALVE  E=3e-07 s/c=0.89 id=39% cov=26%
---------------VLYRDADFIAINKPWGLSVTDGPKIKYSSEVPILI----------HRLDTATAGVQLLARHKSAA-------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C8NA36(1-63:80) Ribosomal large subunit pseudouridine synthase D n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA36_9GAMM  E=3e-07 s/c=0.91 id=37% cov=24%
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------MAAQHYPLVGDPLYGlatpsgkglppeVRQTLLAFPRQALHATALTLSHPADDDEITFASPLP-
>UniRef50_Q0F0K3(57-204:249) Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0K3_9PROT  E=5e-07 s/c=0.38 id=22% cov=65%
-------EPLDHPdgLTIIY--------HKPLDTVCSRKEGGRlIYDDLPARWLDRKPPFSPVGRLDKDTSGLLIVTDDGQLNHCLTSP--KQHISKTYSVTLAEPLQ----------GREAEIMAAGTLLLENDDRPCLPAELIVHSPTQAS---LTLHEGRYHQARRMFVALG-----------------------------------------------
>UniRef50_A6Q895(7-158:188) Pseudouridine synthase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q895_SULNB  E=9e-07 s/c=0.37 id=22% cov=38%
----------------------LLVLNKPKGYVVTRSD-ELGRKTVYDLLPDWafHDGWMPIGRLDLESKGLLLFTTDGKIGDALTRP---GNCIKVYEIWVRGHVTDEH---------------------------------------------------------------------------------------------------------------
>UniRef50_A5WGV6(107-242:345) Pseudouridine synthase n=7 Tax=Moraxellaceae RepID=A5WGV6_PSYWF   E=1e-06 s/c=0.41 id=23% cov=22%
----------------------------------------------------------MVGRLDINSTGLLLFTNDGELAHRLMHP--SNEIVREYAVRILGELTPE----------------------------------------------------------------------------------------------------------------
>UniRef50_D0SB72(60-202:368) Pseudouridine synthase n=5 Tax=Acinetobacter RepID=D0SB72_ACIJO   E=1e-06 s/c=0.39 id=21% cov=39%
------------------EDEirrRVLIYYKPEGEICSRND-PESRPTVFDQLPAiANDRWVMVGRLDINSTGLLLFTNDGELANRLMHP--SNEVEREYAVRVMGEVTP-----------------------------------------------------------------------------------------------------------------
>UniRef50_C9M8T9(63-202:241) RNA pseudouridine synthase n=2 Tax=Synergistaceae RepID=C9M8T9_9BACT  E=2e-06 s/c=0.39 id=24% cov=22%
-----------------------IVIRKPRGYICAVTNPDY--PVVLDLLPRSYDRLRlfPVGRLDLQSEGILIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_D0J8G4(456-614:642) Pseudouridine synthase, Rsu n=96 Tax=Bacteria RepID=D0J8G4_COMTE   E=2e-06 s/c=0.34 id=21% cov=49%
-------------------------------------------------------------RLDIDSVGLLVLTQDGRVARQIIG--EDSEVDKEYLVRVTFGDRDVDVQSVFPEEKLALLRHGLSLDEQPLKPAQVDWQ-------NPEQLRFVLTEGKKRQIRRMCEQVGLKVVG------------------------------------------
>UniRef50_B3L0G1(123-291:328) Pseudouridine synthetase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L0G1_PLAKH  E=2e-06 s/c=0.32 id=35% cov=22%
------------------------VLHKPKGFLCT-SNDEKDRASIYSLFPQDIMDNYrlvSVGRLDRNTSGVLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI00016B2405(75-212:237) pseudouridine synthase n=6 Tax=candidate division TM7 RepID=UPI00016B2405  E=3e-06 s/c=0.39 id=17% cov=48%
--------------------------------------------------------LKPVGRLDANSSGLLLLTNDGDFAFRMTHPKFKKN--KQYNVTLDKELAPLHQQMIAD----------FGIQLNDG---LSKLGLSRQSNQDRHNWIVTMSEGRNRQIRRTFAALGYTVI-------------------------------------------
>UniRef50_Q7MMX9(67-196:347) Pseudouridine synthase n=43 Tax=Vibrionaceae RepID=Q7MMX9_VIBVY   E=5e-06 s/c=0.41 id=22% cov=21%
-----------------------IALNKPTGITCT---TERNIPGNIVDFIGHKKRIFPIGRLDKPSDGLI----------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C6HUV8(53-194:237) Pseudouridine synthase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUV8_9BACT  E=6e-06 s/c=0.38 id=14% cov=45%
-----------------------------------------------------FGRIRPLGRLDAASAGLLLLTNYQEPWSHFLSP--EGGVRRRYRVKIRPGLRAEDRKLFLS-GKAGEGAGYRRVEVE-----------IEREGPKSSWLLISLVEGRNREIR------------------------------------------------------
>UniRef50_Q54RS0(68-205:571) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RS0_DICDI  E=6e-06 s/c=0.38 id=18% cov=62%
-----------------------IAVHKPSGYICSTVNDHDHKiiyDILPKEFFKRKPTLSIAGRLDKWVTGLVVLSQDGKLVDRIISPKDDG-CGKDYEVVLKDK-----------LVGDEAEVFESGKIMLRGESTPCKPAKLQVLDKEKNKVKVTLYEGRYHQIRRMFAS-------------------------------------------------
>UniRef50_A9NFY3(57-198:236) Pseudouridine synthase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFY3_ACHLI  E=8e-06 s/c=0.37 id=21% cov=24%
------------------EEKFYILLNKPVGIVSTTNTAISGNMITFMNFKE---KIFPVGRLDKDSHGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q89AL1(56-205:247) Ribosomal large subunit pseudouridine synthase B n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=RLUB_BUCBP  E=8e-06 s/c=0.35 id=20% cov=43%
----NYKPKLNINksLKVL-------LYNKPEGEICTRKDQRNRRTIFEKLPKLSNARWINIGRLDLNSSGLLLFTTDGELAYRLTHP--SFNIERIYKVRVFGQFTE-----------------------------------------------------------------------------------------------------------------
>UniRef50_C0QV84(66-208:359) Pseudouridine synthase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QV84_BRAHW  E=1e-05 s/c=0.37 id=13% cov=62%
-----------------------MALYKPIGVVST-TKYLPGRRIITEFFKGIKERLFYAGRLDSESRGIMIITNDGEFANIITHP--SYEILKVY-----------DVTVNGKIDSEALLNASKGITIKNVSYSPFKFKILSKGRIQ-SKIRLTINEGKNREIRKIFDHLGY----------------------------------------------
>UniRef50_Q21MN5(71-200:324) Pseudouridine synthase n=6 Tax=Bacteria RepID=Q21MN5_SACD2   E=2e-05 s/c=0.40 id=23% cov=22%
-----------------------IAYNKPFGITCTTDQTVKG--NIVDAIDHD-ERIFPIGRLDKPSEGLILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_UPI0001BC54DC(81-204:239) ribosomal large subunit pseudouridine synthase B n=3 Tax=Fusobacterium RepID=UPI0001BC54DC  E=3e-05 s/c=0.41 id=23% cov=45%
-------------------------------------------------------RIFPVGRLDYRTSGLILLTNDGDLFNRMMHPRAE--IFKSYEVL-----------AKGHLTKEQLKTLEEGVELEEGKTLAALIAKVKYEKGNT-FFEISIREGKNRQIRR-----------------------------------------------------
>UniRef50_A6D701(2-130:164) Pseudouridine synthase (Fragment) n=2 Tax=Vibrionaceae RepID=A6D701_9VIBR  E=3e-05 s/c=0.40 id=21% cov=44%
-------------------------------------------------------------RLDVDTTGLVLITDDGQWSHRITSP--KHKCAKTYRVWLA-----------DPVQDNYIKAFEEGIELRNEK-APTLPAQLEIIDEK--EVLLTIHEGKYHQVKRMFAALG-----------------------------------------------
>UniRef50_C6VS09(12-165:225) Pseudouridine synthase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS09_DYAFD  E=4e-05 s/c=0.33 id=22% cov=25%
------------------------IINKPPNMVSQFVSSHDVR--LLGELDFDFPEgTHAVGRLDSMSEGLLILTTNKKV--------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A5IYZ4(55-197:232) 16S rRNA uridine 516 pseudouridylate synthaseand related pseudouridylate synthase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IYZ4_MYCAP  E=5e-05 s/c=0.35 id=17% cov=65%
--------------SILkYEKFQYYMFNKPANFIC--ANSDSEEATIFDIVGLPAEKFFSFGRLDKDTEGLLILSNDGQMCHRLLSP-------------KNHVPKKYYVKVDKKIDSEILLNHSPIKINDDFIVSKYILELIDDKG-----CFLTIYEGKFHQIKRMFGSLGFSVL-------------------------------------------
>UniRef50_B2A2J2(86-309:328) Pseudouridine synthase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J2_NATTJ  E=5e-54 s/c=0.95 id=34% cov=96%
--------PQSIPLDIVYEDEYLLVVNKPRNMVVHPGAGNYRDTMVNALLYHCqnlsdgtsYERPGIVHRLDKDTSGLLVVAKQNETHDILSEEIKNRRVARTYLALVIGDFSKKKATIDLPIGRDPRNRKKMAVVH-GGKRAITKVEMLRSFqnPEKISYLKCSLETGRTHQIRVHLSHLGYPLLGDPVYRGKtgknvDIDKNLTGQALHSFSLAFTHPVFKKTMVFRAPLP-
>UniRef50_C6BSG2(89-319:549) Pseudouridine synthase, RluA family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSG2_DESAD  E=9e-51 s/c=0.87 id=39% cov=97%
--------PEELPLEIIYNDGKIAVINKPAGLTTHPAPSCPTGTLVHRMIHHfpeirdmDEWRPGIVHRLDKFTSGLITVALNEHDRLAMSTAFADREVNKAYLAIVHGVPKREFGEIDQPMGRHPVHKTKMAVVLKGGRDARSEYEVLWSDPaGRASLVKVKIYTGRTHQIRVHMAHIGHPLVGDQVYGSmphaiweqdqPQLAKLAERQMLHAYSLSFTHPDSEEELSFTqAPPeDF
>UniRef50_A6NQQ9(79-290:300) Pseudouridine synthase n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQQ9_9BACE  E=1e-50 s/c=0.95 id=37% cov=95%
--------PAPGPLDIVYQDQDVLVLNKAPGVAVHPGPGH-YSDTIGNFLMDYYRKqgiladFHPVHRLDRGTSGLLLVALHGHAQEVLKEQLHSPSFRRVYLAVCEGAPNPPSGVIDAPIGRLEGSVLA-RTVRPDGQRAVTHYRTLRTVNDR-ALVRLELETGRTHQIRVHMAHLGHPLTGDFLYGT-EDQSLIPRPALHAAELSFTHPITGKTMAFTAPLP-
>UniRef50_C5VRN0(78-289:302) Pseudouridine synthase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRN0_CLOBO  E=4e-50 s/c=0.94 id=32% cov=95%
--------PEKMDLDIIYEDNDIIVVNKPKGIVVHPTKRHLNGTLSNGVLYYFNDKNensivRLVNRLDMDTSGLVLIAKNAYSHMALSRDMQKDDFVKKYLAIVHGNFNEDSGVIDKPIYRVGEGTLK-RIIDERGQRSITLFKVIEQY-KNASLVELTLETGRTHQIRVHLSSIGHPIYGDSLYGEEEPQ-YIDRQALHAYKLQIPHPKDGKILKLESSLP-
>UniRef50_A1HR26(70-279:301) Pseudouridine synthase, RluA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HR26_9FIRM  E=1e-49 s/c=0.94 id=33% cov=94%
--------PMKMPLHIVYEDDFLLIVNKPAGLLVHPTSDPTEPTLAHGILYYLHSKgalgaFHPIHRLDRNTSGLVAIAKHPHIQHALSGGGAKG-LKRLYLAVVTGIPSSLMGRIDAPIGRHPNSIIK-RVVRSDGQPAITLYRVLSTFS-MASLVELELLTGRTHQIRVHLSHIGHPLLGDDLYGG--ATDLIRRQALHAASLSFRHPATDKVLTLTSPLP-
>UniRef50_Q1CZL9(354-559:559) Pseudouridine synthase n=5 Tax=Proteobacteria RepID=Q1CZL9_MYXXD   E=5e-47 s/c=0.92 id=45% cov=92%
-------------LDIVFEDEWLVVVEKPEGLLSVPAKDVSVEDSVLARLRARAPEAAgtmLAHRLDLDTSGLLVAAKDARTYAALQRQFAGREVHKRYAAWVEGNVQGERGTIDFPMRVDLDDRPRQIHDPVHGKPAVTEWHVLERSHGRT-KVALFPLTGRTHQLRVHAAHplgLGAPIVGDRLYGHPG-----PRLHLHAEALSFQHPVTGQRLTLERPAPF
>UniRef50_D2M2K8(72-288:298) Pseudouridine synthase, RluA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2K8_BACS4  E=6e-47 s/c=0.87 id=34% cov=94%
--------PYKIKLHIIFEDEHVIIINKPPHLPTIPTR-NEGEPSLAGAILAYYIEngipstFHAVSRLDRDTSGLVMVAKHRYMHDLCVKLQKSYEIKRSYVALVEGILSDDYNTIDLPISR-KTTSIIEREVNEFGKSAITHYEVLKRYS-GATLLQLTLETGRTHQIRVHMSAIGHPLLGDTLYGGDV--RYIDRQALHSHQLSFFHPINKREYTFHCPIP-
>UniRef50_Q38VN9(66-287:306) Pseudouridine synthase n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VN9_LACSS  E=2e-46 s/c=0.84 id=33% cov=94%
--------PVKGDLKIAYEDDHFLIVDKPAFVASLPAPNHPN-NTMANFVKQYLIDEqaeslavHVVTRLDRDTSGLMMFTKHGFAHSLLDRQLQSKELQKTYIAIasgDMREDLPQHAWIDRPIKRSEEFYMR-RVVGEGGKRSLTEYWQAAH-GDGATLVKLKLLTGRTHQIRVHFASLGHSLIGDNLYG--ESNDLLPRQALHCRQLTFYHPFEERTITVKSPVP-
>UniRef50_A4XKV9(72-279:292) Pseudouridine synthase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKV9_CALS8  E=3e-46 s/c=0.90 id=32% cov=94%
--------PIKGSIDILFEDQFFLFVNKPSGIPSHPSKGHYFDTLannVEWYLNSQGVTSHIINRLDKDTSGIVVFAKNSYFHSIVSSEFEKRTIEKTYIAVVDGILTKKSGFIEKPISRSNDGIKRE--INEDGDYAITYYEVVDY-KNNYSILKLKPITGRTHQLRVHLASIGYPIVGDVLYGTGKNKNF--PLLLHAYSMKFDFKLIERQYNITAPLP-
>UniRef50_A4FXG9(73-286:298) Pseudouridine synthase, RluA family n=5 Tax=Methanococcus RepID=A4FXG9_METM5  E=8e-46 s/c=0.86 id=28% cov=94%
--------PEKLLLCVIYEDDDLLIVDKPKNMVVHPTKNVLSGTLANAIsnhqkINNQNYKIRFVNRLDMDTTGLLIIAKNSYSHQQLAKQMDEGILEKIYIVVVNGHLDSKEGVIEDSI--DLNDDGIKRELSTFGKISKTKYKVIEEF-NNVSVLEIKLLTGRTHQIRVHLSSFGNNIIGDTLYGKTA--DLIERQALHSHILRFIHPITKENMEIRSKLP-
>UniRef50_A5IZB6(66-291:305) Pseudouridine synthase n=4 Tax=Mycoplasma RepID=A5IZB6_MYCAP   E=2e-45 s/c=0.81 id=28% cov=94%
----------DMPLDIRYEDEYLLILNKPSGLVVHPAPGHLNDTLVNALMYHfknnlsdanGLLRLGIVHRIDKDTSGLLIIAKDNETHNELAKMLKNHQIKRTYLAICEGILPNKTTKINLPIQRDTKNR-KLMSIHKDGKSSVTYVHMLKSFyidNKPYSLVKCELETGRTHQIRVHLAYIKHPVYGDSIYGKSVDEFN---QRLHAYKLSFMHPVINKLIEVYSdiPKEF
>UniRef50_UPI00016B2413(171-379:379) ribosomal large subunit pseudouridine synthase, RluD subfamily protein n=3 Tax=candidate division TM7 RepID=UPI00016B2413  E=3e-45 s/c=0.88 id=39% cov=91%
--------------ETIYEDNDIIVINKPAGMLTHAKGAIAEEFTAADIVkpitnyKADTNRPGIIHRLDRNTSGVLLMVKNSDAASKIQKQFSQRTVKKTYYAIVCGIPYQHKALIDLPIERN-PSRPSTFRVGVNGKSAQTSYEVERSiIKKNISLIKLQPKTGRTHQLRVHMQYLNTPILGDLVYGGKPAE----RMFLHAESLEVTL-LSGERKVFKAPLP-
>UniRef50_B9XS18(12-211:536) Pseudouridine synthase n=1 Tax=bacterium Ellin514 RepID=B9XS18_9BACT  E=9e-45 s/c=0.91 id=34% cov=90%
---------------ILFEDEHLLVVNKPAGMNTH-APSPYAGEGIYEWLKHREPRWaslAIVHRLDKETSGVMVFGKTTVANRSLTEQFTNHSIRKKYLLLTDKVVSSQTSTMVSCLVRVGEKYLS-RPVHAGGEKAETHFEVI-TKAEGGTLVEAEPITGRTHQIRVHAAEQGFPILGDALYGGTK----ASRVCLHAAELKLKHPGTNAEMTFRAEPNF
>UniRef50_B9MS57(72-280:293) Pseudouridine synthase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MS57_ANATD  E=2e-44 s/c=0.87 id=33% cov=94%
--------PVEGSIDILYEDNFFLFVNKPSGLPSHPSKGHYFDTIanyVEYYLNSKNLTSHIINRLDKDTSGIVVFAKNSYFHSIVSYEFEKRRVDKTYIAIVHGILTKKSGLIEKPIKRSDDGIKRE--IHQDGSFASTYYEVIDSF-ENFSVLKLKPITGRTHQLRVHLSSIGHPIVGDYIYG--EEKTQNTPLLLHAYSISFNFKlINNKVYDITSPLP-
>UniRef50_A7I2U9(80-321:357) Pseudouridine synthase n=23 Tax=Campylobacterales RepID=A7I2U9_CAMHC  E=4e-44 s/c=0.74 id=30% cov=99%
---ENLKQNANFDIEILYEDDDLLVLNKPSGVVVHPAKSVKEPTLAEWLKQKKYmlssingdERAGIVHRLDKQTSGAILVAKTDFAHVKLAAQLKDKSMGRIYLAFLDLALKENVCV-DRFIARNPSNRLKKAVVPPNENGARSAKSAflniandtilqnfkplnFSQNQTNFNLIAAKLFTGRTHQIRVHLSSINRHIIGDFLYGFKSDFDKIKRIFLHAYLLYFTHPRTNRQILISAkiPSEF
>UniRef50_C0N6T7(96-305:318) Pseudouridine synthase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6T7_9GAMM  E=5e-44 s/c=0.85 id=33% cov=93%
--------------DIIFEDDSMLVLNKPSGLAVHAGSQIQVGVIEAFRiIKPELAFLELVHRLDRDTSGCLLLAKSRDSLLNLQQQMLSDQIDKRYLTLLKGILPNAEELVEQPLLKNTVSSGERMVkVTPDGKRAKT-LFIRQQDLSLAQLTEVKLYTGRTHQIRVHAAWTQHPVAGDDKYGDREFNKtlksfGLKRLFLHAWRLGIRHPVSGEPMQLEAPLP-
>UniRef50_Q21K97(74-300:321) Pseudouridine synthase n=10 Tax=Gammaproteobacteria RepID=Q21K97_SACD2  E=6e-44 s/c=0.79 id=37% cov=88%
-----------------------LVVNKPAGLAVHGGSGVTLG--LIEALRQAFPQYsylELVHRLDRDTSGCILVAKKRSMLRYLQELFRgEKRIHKRYLALVIGRWPSRRNLVDAPLLRKELQSGERIVRVSlDGKPSKTEFNVVQRFGESATLVEARPITGRTHQIRVHAQHQGHPLVGDPKYGNEvfdlsVKKLGVNRLFLHAAGLSFKN-ADGEQVNIEVPLP-
>UniRef50_Q83G23(76-283:303) Pseudouridine synthase n=2 Tax=Tropheryma whipplei RepID=Q83G23_TROWT  E=1e-43 s/c=0.86 id=34% cov=92%
-------------LRVIYSDDDLFVIDKPAGVAAHASPGWCGPTvtgCLSGLLAACGPqdRQGIVHRLDANTSGLMVLAKSDLAYHNLKAAFRDRAIHKRYKALVQGYPDPSSGVINAPIGRDLKHRDRFCIDYS-GRDAVTQYSTEEVYP-GFTLLSVAPKTGRTHQIRVHFSALRHPLVGDVKYGADPvfsQKVNLKRQWLHAYHLSFTHPVSGVFVEFES----
>UniRef50_D1VV86(80-288:300) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VV86_9FIRM  E=4e-43 s/c=0.85 id=30% cov=91%
-------------IDICYEDYDLLIVNKEYNCVTHTAKDD-SKDTLLNYLAGYFEKNnikrkvRFVNRLDRDTSGLIIVAKNSYAHAKIMDEFSNNQVDKIYLAICRGDFKEKQGEIVKKISLCQ-DGIRREVDDDNGKYAKTKYQVLK-DNKKLALVKLKLFTGRTHQIRVHLKSIGHPIIGDKLYNDsNEEQNLMNRQALHSYSLSFKLPRTGELKTFTA----
>UniRef50_D0L1K7(110-326:346) Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1K7_HALNC  E=5e-43 s/c=0.81 id=35% cov=93%
--------------MIVYEDEALLAVNKPAGLAVHGGSNIPFGLIELMRQHTGLGEKlELAHRIDRDTSGLLILAKTRATLHSLQTQFRpEGHAEKQYLAIVHGHWPDKLKRVDAPLEKWQGEGESHRVqVNPQGKEAVTHFAVLA-ANKNATLLRAQLETGRTHQIRVHTAHENHPIVGDEKYGQREWDKRLfpstgasarrrPPLLLHAYRLMLTHPQTEQPLQLTAPIP-
>UniRef50_B9L8H5(69-282:311) Pseudouridine synthase n=1 Tax=Nautilia profundicola AmH RepID=B9L8H5_NAUPA  E=3e-42 s/c=0.81 id=31% cov=90%
-------------IPVLYEDEDVLVINKPPGIVVHPAPSVKEATLVDWLKTKNYrlstiageERFGIVHRIDKETSGALIIAKNNKAHEFLSAQLKDKTMGRYYIMLLNEPLKEAVCV-DKPIARNPKNRLKMAYV-KNGREAKTLFVPVYEN-----VAAAKLFTGRTHQIRVHLSTIGRYILGDTLYGKKEQK--LPRVMLHAKELYFIHP-SGKKLSIIAPMfdDF
>UniRef50_D1XZI5(360-571:577) Pseudouridine synthase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XZI5_9BACT  E=3e-41 s/c=0.80 id=43% cov=90%
-----------IEIPILFEDNYLAVIDKPAGLLSVPGK--KLATSVYALLKQKWQgrcKPYMVHRLDMDTSGLMVVAKQAHVYHDLQQQFINRTVNKRYTAFLPlsllDKNLPPKGKIILPLTADLFDRPRQKVDKEVGKIAITTYEIVgkthygERLKQLAVRVLLYPHTGRTHQLRVHCAHsegLGTPIIGDNLYGNK-----ANRLHLYADRLRFVHPITHKEMTFS-----
>UniRef50_C7MES4(103-307:318) Pseudouridine synthase, RluA family n=5 Tax=Actinomycetales RepID=C7MES4_BRAFD  E=6e-41 s/c=0.82 id=31% cov=90%
----------------LHEDEDLLIIDKPAGVAVHRGTDVPAGVIDALRqLRPELPDLELIHRLDRSTSGVLALAKSPSMLRYLHDLLRDRedEIERRYLALVAGHWPAETTILDAPLRREENR----VVVDPDGQRAETHVAVAQRFGNRATLLEVRLLTGRKHQIRVHLQHAGHPIAGDDRYGDDAFNRRAaslggTGLHLHAAELVIPRP-DGTTLAVTAPTP-
>UniRef50_A5WCP4(146-350:364) Pseudouridine synthase n=15 Tax=Moraxellaceae RepID=A5WCP4_PSYWF   E=7e-41 s/c=0.82 id=32% cov=90%
---------------VVYEDEGLIVLNKPSGMAVHGGSGLDFGVIEAMRDATSKKYLELVHRIDKDTSGLLMIAKKRSTLKVLQEYLREKTIQKHYLCLVKGQPALNEFEIDAPLLRYTVANGERRVKVDkanpEAKLSQTTCKVLARFkmnGEPVSLIEAMPHTGRTHQIRVHLAYLGHPILGDDKYNIKDT-SGVRRLCLHAWQLDVP-----EYEVIKAPLP-
>UniRef50_C6V544(94-295:305) Pseudouridine synthase n=2 Tax=Neorickettsia RepID=C6V544_NEORI   E=1e-40 s/c=0.83 id=32% cov=90%
----------------LYEDENVLAIDKPFGFPVQSGYG--ITTSIDNAMKSINPEYRVVHRLDKHTTGVLIFAKTLDAARELWRLFSNRLVKKRYLAIVIGELKEKKGAVDCYINKVlfKGEEVMQCNHIGNGEHAITQFHVIKKF-KNASLIELFPLTGRKHQIRSQMASIGHPVLNDGKYGRREAFLECsvnKKLCLHACEIEFE--LFGKIIKVTAELP-
>UniRef50_Q1GB64(65-286:302) Pseudouridine synthase n=17 Tax=Lactobacillus RepID=Q1GB64_LACDA   E=9e-39 s/c=0.73 id=31% cov=90%
------------PLDIVEETADYLVINKPAGLLSIPS-GFHAEDAVINRVLAYFEKQgvnpayvkpHIVTRLDQDTSGLVLLGKNAIAHDRFSKLGKDAFIKK-YHAIVHGNFAEGDlsGLIDKPLARVGDTVKRE--VNPKGQRALTEYRVLNQVP-GASLVELRLLTGRTHQIRIHMASIGHVLYGDDLYGARDAFA---RQALNCFYLAFPNPFSGEEREIEIP---
>UniRef50_B9ZR86(82-311:328) Pseudouridine synthase, RluA family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR86_9GAMM  E=2e-38 s/c=0.70 id=31% cov=99%
-AVERDIPPgvlDRLRRSILHEDDQVLVLDKPSGLAVHGGSGLAFGIIEAMRQLRPGSELELGHRLDRETSGCLLLAKSRSGLQDFHAALREGRVEKRYLALQVGAfPSDQPIVCDEPIASSRGPDGKRRMragedaDPESARSAISQFVPLERYG-SFQLAEVRIGTGRTHQIRVHGQAIGHPVGGDHDYGLPDANRvlrgaGLKRLFLHAQALQYEDSAS-ESHVYSAPLP-
>UniRef50_A6G930(98-339:356) Pseudouridine synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G930_9DELT  E=4e-38 s/c=0.66 id=37% cov=96%
--------PEEPAviLDygVVHEDPDVLVLDKPGNLPVHPTARYHRHTLTALMRRRLGPKhgWEMAHRIDRETSGVIIFGRRKASGPKIKGSFFRREVHKEYLAIVLGRLELPEGprLIDMPLGSAVGSKIMIKMgprpVDEGGLPAQTTIEVLahgEHRGQPITLVRCLPRTGRTHQIRVHLAEIGHPILGDKLYAAEEDEFlavvedgepvaelearlGLWRQALHARALSLPHPTTGDGVRYVAPWP-
>UniRef50_C5SM25(65-272:286) Pseudouridine synthase n=2 Tax=Caulobacteraceae RepID=C5SM25_9CAUL   E=2e-37 s/c=0.75 id=35% cov=91%
----------------IHEDGVIMGFNKPSNLSSQGGRGNFHNldDMLWAFARSNGNKPRLLHRLDRDTSGIILAAKTRTSAAFVGNAIAARDVHKAYVCIVANPHNlKDEGVIDAPLRREEIGREAYSRIcdphHPDALTARTIYRVVSRT-DTSALVQCEPFTGRMHQIRVHMAHLGCPIAGDVRYGGALSLDGLrvPRLMLHARAIDFPHPDGGRR-RWEAPP--
>UniRef50_A5EXY5(94-299:313) Pseudouridine synthase n=2 Tax=Cardiobacteriaceae RepID=A5EXY5_DICNV  E=8e-37 s/c=0.75 id=29% cov=91%
---------------VLYEDDHFLILNKPAGIVVHGGSGHEFGVIDVVRSIWGENYAELAHRLDGDTSGVLVLGKHRQALNAFQTAMNEGTVEKRYWALVDGVWTREEAEVVVHLTKAPLNVREKMQVseLENAQFARTWFYVLQRWQD-ATLMEAVLDTGRTHQIRVSAAHCQHAIAGDKKYGKREFNDlvrkkGFHGLFLHAREIKFC--YQNQTIHVMAPL--
>UniRef50_C8X5P4(79-273:299) Pseudouridine synthase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5P4_DESRD  E=5e-36 s/c=0.78 id=29% cov=87%
-------PPPALKLERIAETETLLVLAKPAGLPVQPGS--KHGASLVRELAKAYPEtpwpPQPVHRLDKDTSGIILVAKRADVFQIIQQAWQRGEVQKDYLAWLAPGDDvgPGWHTWRDRIEICHTDRGEKMCCTEGGKEAILHLRPLRRNSLGEILVAIQLETGRKHQIRVQSANRGLPVVGDRKYGQTSQKTG---LMLHAWRLG------------------
>UniRef50_A1VXA1(63-276:300) Pseudouridine synthase n=18 Tax=Campylobacter RepID=A1VXA1_CAMJJ   E=7e-36 s/c=0.71 id=31% cov=86%
--------------EIVFENEDFAILEKESGILSHPNGRHCKYSLSDEIWHLWGKEACVAHRLDKETSGLILIAKNKKAQIDLKSLFEKKLVQKEYLALAHGKIEENFIVDKAiNLTKNYDDVKTRMQICKEGKQAITEFEILEYFPKiNATLLLCKPLTGRQHQIRVHLHYKNHTILGDPLYGLSKQQiesildeklnpkerlklTGALRLCLHSYRLKF-----------------
>UniRef50_P43930(1-186:224) Uncharacterized RNA pseudouridine synthase HI0042 n=15 Tax=Gammaproteobacteria RepID=Y042_HAEIN  E=5e-35 s/c=0.81 id=32% cov=84%
-------------IEVVYQHSDFIIINKSEGISVHKDQEEQGLTELVAK-QLNVPKVWLVHRLDKVTSGLLILALNAESAAEFSRLFSEHKIHKTYLALSNQKPKKKQGLIIGDMKKAREGAWKLCQTKDN--PAITRFESVSCEP-NLRLFILKPQTGKTHQLRVAMKSLGSPILGDGLYGKNTEK--IDRTYLHATQLEFD----------------
>UniRef50_D2MPF1(5-208:225) RNA pseudouridine synthase n=1 Tax=Bulleidia extructa W1219 RepID=D2MPF1_9FIRM  E=5e-35 s/c=0.73 id=29% cov=89%
-------------IKIIYEDNHLLVVEKPVNVLSQ--ADNSQEDDMVSRLKKLIKirdqkpgqvFIGLVHRLDRPVGGLMVFAKTSKGASRLSDSIRCHTFKKIYLAIVDSVSLPQEGTLEDYLYKDSQKNRVFVVDAKKGKLARLHYQVLAKKRGK-SLVRIVLETGRPHQIRVQFASRNWPLVNDQRYHPHPNRGS---ICLFAYQLSFPHPTKREEISFQ-----
>UniRef50_C9RJ15(71-314:321) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJ15_FIBSS  E=8e-35 s/c=0.61 id=29% cov=99%
--VENYSEPEVPtDFETVFEDDEFILVAKPAGVPVHHtGRIFYNTFAAIIRREFDSETATPMHRLDRDTGGLILFARYGETAARFQKNLDRILLRKFYLAVVRGKFPEGEVECHMPLREDPEDPIRLRMHHrEGGKECFTRFKLVRHldcpeIAPELSLVEAELITGRKHQIRAHLAEMGYPIVGDRLYYRDGEFYqklaqggeltdedikvlGAHNQMLFAYKVELQLPYWKEPRTFEShayPAD-
>UniRef50_A0Z298(102-309:320) Pseudouridine synthase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z298_9GAMM  E=1e-34 s/c=0.71 id=34% cov=86%
--------------SIIREESTLLVVNKPPGLAVHGGSGINVGLIETLRAMYETDRYlELVHRLDRDTSGLLLVARRASTLRNLHVLLRSNGIDKRYLCLVNGRWPAHLKRVDAPLEKFALPSGERRVkVAATGRQSLTTFRVVRRWS-SATLVEAKPVTGRTHQIRVHCQHAGFPILGDAKYADEAAvriadKLGLKRLFLHAASLNFR----------------
>UniRef50_C4Z0B5(90-298:333) Ribosomal large subunit pseudouridine synthase C n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0B5_EUBE2  E=1e-34 s/c=0.71 id=29% cov=86%
------------PLDIIYENSDVIFINKPSGMLSQKAKPED--VSLVEYLIAHLihkgelnagdlasFKPGICNRLDRNTSGIVAAGKTTKGLQQLSEAFKQRTLGKYYLCIVKGNVDKRA-LIKGYLYKDNKTNKvtISRTETKDSLPIETEYIPVCSNG-NVTLLKIHLLTGRSHQIRAHLASIGHPLIGDYKYGQKSVNDTFNRqykvkdQMLHSYELDIPD---------------
>UniRef50_A5G5P6(76-269:296) Pseudouridine synthase n=2 Tax=Geobacter RepID=A5G5P6_GEOUR   E=1e-34 s/c=0.76 id=34% cov=86%
-----------PELDILHEDQWIMIFNKAPGLPMHHAAEVDERNLVdlgtklLAGRDGGSVKLRPVNRLDRGTSGAVILAKSSMAAAMFGRLIMDEGLGKLYLALVEGELAE-DGVISVPL---------------EGKEAETRYRVLFHRSD-CTFVAVYPVTGRMHQIRQHFKFIGHPIRGDRRYGGQPLPGFAGN-ALHSFRTSIVHPATGETLQVFAPL--
>UniRef50_A0LXI9(77-277:289) Pseudouridine synthase n=1 Tax=Gramella forsetii KT0803 RepID=A0LXI9_GRAFK  E=2e-33 s/c=0.72 id=29% cov=86%
-------------FEVLFEDEHIAVVHKPPGFPTSGNYFKTIENALPHNLSssseiDTLPYPLPAHRLDNPTSGILLCAKTNSSLIKLQEAFAQKQIQKTYYAI-------VSGEIKEKIEIDSPIDQKIS------KTILIPIEFYQIENKNYTLVELNPLTGRTHQLRIHLSENNTPIIGDNLYGKEETNLLKNKsIYLFAGKISFDHPLSKKLMTFQ-----
>UniRef50_Q4PCI6(44-230:1096) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCI6_USTMA  E=5e-33 s/c=0.76 id=30% cov=80%
-------PPVtDEPIKIIHRDDDegILVIVKPGSIPVH-AAGRYLRHTLVGLLQSEHGvdMVYTTNRLDRLTSGIMVCSTKKETASRLGAQFAAGQVNKAYVCRVRGKFPQGEVVCKQPILTIDRQSGVN-IVHPKGKHCETIFVRLSYdASDDSSVVFCRPITGRTHQIRVHVQYLGHPICNDPIYGHD-----------------------------------
>UniRef50_C6XLD8(41-248:272) Pseudouridine synthase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLD8_HIRBI  E=7e-33 s/c=0.68 id=37% cov=87%
------------------EDDSILAFNKPSGLACQtRSPADRTFDALLQvYVKRNGKRPRMLHRLDMLTSGVIIAARTKPATSFFQQTFERREAYKSYLAIVRGPaFEKSEGVIDAHLQRYQKEpnlalMRPCDVDGEGAQDARTRYLVLSSQND-YHFLLLTPETGRTHQLRVHLEHFGRPILADPYYGTDALEGSYQpaRLMLHAYRLLTPHPDGGE----------
>UniRef50_B6HIT3(109-322:526) Pc21g01540 protein n=3 Tax=Trichocomaceae RepID=B6HIT3_PENCW   E=7e-33 s/c=0.66 id=29% cov=78%
---------------IIYEDDDLMVIDKPAGVPVHAAGRYNFNTVIQILRSERGSEWlpRPCNRLDRLTSGIMFIGKHAKGADKMAAALKARSVQKEYVARVKGKFPDGVVVCDQPIMQVSPKLGLNRV-RATGKEATTKFRRLAYYPpesaketesssdderpatppasfanetEGYSIVHCLPLTGRTHQIRVHLQFLGHPISNDPIYSNRR----------------------------------
>UniRef50_D1AYL9(80-268:280) Pseudouridine synthase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYL9_STRM9  E=1e-32 s/c=0.75 id=23% cov=84%
--------------MIVFEDEDVFIINKPNNMPMHKGDKHKFGLSETAKAYYNNPNVNFANRLDLETEGLVIGCKNLQILRKVNEEIRNKKIIKRYIAKVEQ--KKLQLDEEFFSDKKIKIFEDRVRVSKDGLEAKTYFKVIEV-KDFKVLLDIELITGRKHQIRVHLSDIGHPIIGDSKYGNYQKK---DRMYLKCYYIKF-----------------
>UniRef50_C7RHG0(79-285:318) Pseudouridine synthase n=4 Tax=Anaerococcus RepID=C7RHG0_ANAPD   E=2e-32 s/c=0.68 id=25% cov=87%
--------PSDFDLDIVYEDNNIIIMDKKSGLLTHSSSKKDYGNNLVDNMLHYLyktksfdmsdrtFKPAVVNRLDRNTAGLVIGAKNAESLRSLNKAIRENKIDKFYLTIVKGYVEKEFSIDTHISKNDNRNRVSKSR---NGKRIKTNFKPLETNKK-FSLLECELITGKTHQIRFSLKENSTPIIGDRKYGDRNTNqklrkFGINNQILLAYKIRF-----------------
>UniRef50_A0KLM3(3-200:219) Pseudouridine synthase n=2 Tax=Aeromonas RepID=A0KLM3_AERHH   E=4e-32 s/c=0.71 id=32% cov=89%
---------------ILAQHKDFMVINKGPGLGMHDETDEAGllHPGLVSRVKADTGlLLYPVHRLDKMTSGLVLLARTTEANRALSMAFAAREVSKQYLALSDRKPKKKQGWVKGDMQKGRGGSWMLTRTLDNPAISWFDSVSVR---EGLRLYRIKPRTGKTHQIRVALKSVGAPILGDARYGGTA----ADRGYLHAWRLAFT--LAGEAFDFVCPPD-
>UniRef50_Q0CVH8(93-309:507) DRAP deaminase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CVH8_ASPTN  E=4e-32 s/c=0.65 id=29% cov=81%
-------PPVTgLPIGIIHEDDDLLVIDKPAGVPVH-AAGRYHYNSIIEILRNENgveWMPRPCNRLDRLTSGVMFIGKTAKGAEKMCAKLQQRTVQKEYIARVKGRFPDGVVICDQPIMQVSPKLGLNRV-RATGKDAKTKFRRiayyppaapaageedsqgegeeraatpppaLANEDEGYSIVHCLPLTGRTHQIRVHLQFLGHPITNDPIYSNRR----------------------------------
>UniRef50_B3PHH1(118-296:347) Pseudouridine synthase n=3 Tax=Gammaproteobacteria RepID=B3PHH1_CELJU  E=5e-32 s/c=0.78 id=32% cov=82%
------------------EQEDFLLVYKKPGVSFHSEQGEPGLFEII-RQRGGYAQLYPVHRLDKVTSGLLVFAKTAEANHQLCAQFEQRLTQKYYLAISAGKPIKKQGLIKGDMYPARRGAWMLGRTLEN--PAITQFFS-QGLGNGQRLYVLKPHTGKTHQLRVALKSIGAPIVGDSLYGDR--HAGIDRVYLHAFSLAFT----------------
>UniRef50_C9SGW9(205-418:549) DRAP deaminase n=2 Tax=Sordariomycetes RepID=C9SGW9_VERA1   E=3e-31 s/c=0.64 id=34% cov=80%
-------PPVTAePIAVIHEDNDYLIVNKPAGVPVHPA-GRYNFNSVVEILKSErgaHFMPRPCHRLDRLTSGILCFGKTAQAATDLSRQIQARMVRKEYVARVIGHFPDGEVVCDQPLLQISPRLGLNRV-RANGKFARTVFKRLAYYppplsdvdggpeqrpktpeeaadeeqrpwtaKKGYSIVRCLPLTGRTHQIRVHLQFLGYPIQNDPIYAN------------------------------------
>UniRef50_C5DCE4(114-311:397) KLTH0B02376p n=2 Tax=Saccharomycetaceae RepID=C5DCE4_LACTC   E=4e-31 s/c=0.69 id=28% cov=79%
--------------KVVHECEDLLVIDKPSGIPIHPT-GQYYQNTLVEVLKSHGKTVFPSHRLDKITSGVLILTKNPHMANKIQHQIRQRTMSKIYLARVDGAFPMADTLgsltpFESPDKTQTVDSAIYTVELKKqfpaafspPREAKTKFYPLKYYPKsDETLVACQPITGRTHQIRIHLARLGHPIVNDPFYNLKNSR--------------------------------
>UniRef50_B7VGV5(40-222:270) Pseudouridine synthase n=17 Tax=Gammaproteobacteria RepID=B7VGV5_VIBSL  E=5e-31 s/c=0.74 id=29% cov=84%
-------------FDILLNHSDFLLINKHPGVSVHKDDGDTMLLQEVAKAINE-PKLYLVHRLDKMTSGILLLAKDAPAASELSQLFAKREVEKYYLAIGSKKPKKKQGLISGDMERSRRSSWKLLTTKEN--PAITQF-LSATAEPGERLLLCKPYTGRTHQIRVAMKSIGSAIVGDPIYNPSNE---ADRGYLHAFAIRFT----------------
>UniRef50_A7K4M8(15-207:243) Pseudouridine synthase n=47 Tax=Gammaproteobacteria RepID=A7K4M8_VIBSE  E=2e-30 s/c=0.69 id=27% cov=84%
-------------FDILHTHPDFLIINKHPNVSVHKDDGDTMLLQEVAK-QSGDEQLYLIHRLDKMTSGILFLGRNAKAASALSQAFADRQVEKFYLAIGSKKPKKKQGLVVGDMERSR--RSSWKLVNSKNNPAVTQFFSLA-AEPGERLFLCKPHTGKTHQIRVALKSVGSGIVGDPIYNAGNE---ADRGYLHAFSLCF-----------------
>UniRef50_Q9ZKP5(57-240:242) Uncharacterized RNA pseudouridine synthase jhp_0890 n=35 Tax=Campylobacterales RepID=Y956_HELPJ  E=4e-29 s/c=0.71 id=28% cov=84%
--------------SVIFEDENILALFKPPFIES-------------YDLVSFFKGWALLHRLDKETSGVILLVKeNSEFHLKAKKAFKDRAVKKEYLAIVQGIIEEER-EINAPILTIKTT-KAFSKISKKGQEAVTIITPLKIINKKT-LLKVGIKTGRTHQIRVHLKHINHPIIGDTLYNN--EPSSAKRLMLHAHKIALL----GYEFEAIAPKEF
>UniRef50_B8LC17(76-281:341) Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC17_THAPS  E=4e-29 s/c=0.63 id=34% cov=89%
-------PPFEVP--VVYEDDHMAIVNKPSGVVLYRAEGGRGGGARDEDTPQNVPlkRPQPVHRLDRPTSGLVVVAKTKLAAVHLSQQFEFRKAEKTYVAIVNGIPRQSG-------VRAEPMQWNTIDYDLEEKTAVTRWRVLRKvkslhgNDGTLTLVEMKPKTGRYHQLRRHCAWVcNSPLVGDTTYDGGSEGALRLRkrgLFLCSSEIALEHPHYNTP---------
>UniRef50_B8P9A9(74-266:448) Predicted protein (Fragment) n=3 Tax=Agaricomycotina RepID=B8P9A9_POSPM  E=9e-29 s/c=0.66 id=29% cov=79%
-------PPVtATPVRIIHHDreREFIIIDKPGSIPVH-ASGRFFRNSLVEILKNDfgFKKVYTINRLDRLTSGLMIIPLSSSMANTLTQEFAAGTIRKEYIARCRGQFPEEELACEVPLLTIDRQMGLN-VVHPEGKPAKTIFKRMHYDANtDTSVVHCEPLTGRSHQIRVHLQYLGHPVANDPIY--------------------------------------
>UniRef50_A9GNR7(134-341:368) Pseudouridine synthase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GNR7_SORC5  E=4e-28 s/c=0.61 id=26% cov=89%
-------PDPSAPLDVVLERDDLVVVNKPAGVPTAPLHPGERGTVANALVARYPEmagigfsprEPGLCHRLDTDTSGLVLAARTAAAFAALGAGLKEGRLDKRYLLICQIGDLPEMGSIEVPLAPHPKDKKRVYPCIHPRDVARYAPRPAATMYKRVRQVGLwELVEARapralRHQIRAHFASVGHPLAGDVLYGGPAVE-GLSRHALHAHYIG------------------
>UniRef50_Q6CG33(105-324:337) YALI0B01276p n=1 Tax=Yarrowia lipolytica RepID=Q6CG33_YARLI   E=1e-27 s/c=0.57 id=34% cov=84%
---------DEKPIRIVFENDALVVVDKPGGIPVHPT-GKYLFNSVKEILKHEtgLEELYPAHRLDKNTTGVLVFAKTSESVNHVTQQIMSRSAKKEYLARVKGRFPPGRVETHHPVVENTIKRNVQ------PKDAHTAFERVAYDEHRdLSIVRCLPSTGRNHQIRQHLLHLGYPIENDREYnpelagvkrrkkveegvcdqcGLPIYQDYHDELYLHAQK--------------------
>UniRef50_B0E5G5(133-324:402) Ribosomal pseudouridine synthase, putative n=2 Tax=Entamoeba RepID=B0E5G5_ENTDI  E=3e-27 s/c=0.64 id=30% cov=75%
-------------LTIVKETNDFIAIDKPSSVPVHPCGRYRHNTVIFILSHEGYPNLRPVHRLDRMTSGILLLAKTIQAARE----FQNHMVikKKEYICRVRGKLEKTVVTSKIGRKRidDKKIHVSVNKIEEDGKECCSEFNPLFYDEKTNTTVAVALLgSGRTHQLRVHLQSIHHPIVNDPIY--------------------------------------
>UniRef50_D1VRZ3(85-279:316) Pseudouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VRZ3_9FIRM  E=6e-27 s/c=0.63 id=26% cov=84%
--------------QILYEDDNICLMKKPLNMLTH-NDKNFYQDNMVDRFIDYLifkeeyspreentFRPSICNRLDRNTSGILLGAKNAETLREINKAIKERLVDKFYLTIVKGKVQKPFEIN----IKLEKTDKNIMRKSSQGKDSLTKFFPLISNGE-YSLLKVKLITGRTHQIRASLKEKGLYILGDRKYGTGKDKEFNS-QALHNYLIKFN----------------
>UniRef50_C0B9T1(1-164:172) Pseudouridine synthase n=2 Tax=Clostridiales RepID=C0B9T1_9FIRM   E=2e-26 s/c=0.74 id=30% cov=74%
----------------------------------------------------------MIHRLDQPVSGILVFARTPAAAKNLNQQLQNDQFEKYYQAV-VCGSLPDSGTLTDYLVKDGRTNtsRICSKNTPGAKKAVLSYEILETSEvTGLSVVQIHLGTGRHHQIRVQMAGAGAPLWGDNKYNPEFVNkRGYFPIALRAFRLSFCHPTTGKRMEFEVPCNW
>UniRef50_Q21JF5(1-172:209) Pseudouridine synthase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21JF5_SACD2  E=6e-26 s/c=0.69 id=31% cov=68%
----------------------------------------------------------PAHRLDKPTSGLCIFAKSSGAAAQFGQLFERKLVTKYYLAITSKKPAKKQGAIIGDMVKTRNGSWKLTAAKTN--PAITHFFSFALAS-GMRLILLKPSTGKTHQLRVALKALGAAIIGDERYGGE----PSDRLYLHAYQLEFE--FNGERHSFKC----
>UniRef50_Q8SVK5(78-249:318) Putative uncharacterized protein ECU05_0680 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SVK5_ENCCU  E=2e-25 s/c=0.69 id=28% cov=77%
--------PAHPEIGVIKEEGDYIVVNKPPGIPCHPTGGYREYCVTKALF--GDEKVACINRLDMPVSGVLILAVRN--HSKCLEAI--RDAKKIYVAKVYGMFPDKVDVDK----RIGCTEGRYRHVNAGGKACLTLFRRLEY-RDGYSLVECRPVTGRTHQIRIHLQSIGFPIANDIMYGDGEA---------------------------------
>UniRef50_B7FPM1(1-168:168) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FPM1_PHATR  E=2e-24 s/c=0.68 id=30% cov=75%
-------------------DAAVYVCNKPSSVPVHPAGPflsNSLTIMVEAQVGLQCGSLKPVHRTDRVTSGLTLCCKSSAVARIFHRCLSEGTVDKLYVARVHGKFPSTNSEMHLDAAVHTLDPAnGVRIVDSAGKPSKSVFKLVDFNqAENVSVIACQPITGRNHQLRVHLQMLGYPIVNDTQYG-------------------------------------
>UniRef50_C7NC29(98-302:314) Pseudouridine synthase n=2 Tax=Leptotrichia RepID=C7NC29_LEPBD   E=3e-24 s/c=0.56 id=20% cov=85%
--------------MIIFENEDFFIVNKSEKIPMHKGTGHKYGLAEVFKEIFKNENINFANRLDFETSGLVIGCKNLKFLRYISQKIRDNEIQKKYFAIVHNiknnieskifkienyltTTENKVIVSENPISKDSKKSITNfkKILISELKNTKKILDLLEKNNKNVFLLDVDLVTGRKHQIRAQLAHQKIPIVGDKKYG---IQDGSNKFFLCCYFLSFD----------------
>UniRef50_Q4UIK0(127-344:441) (RNA) pseudouridylate synthase, putative n=2 Tax=Theileria RepID=Q4UIK0_THEAN  E=6e-22 s/c=0.49 id=30% cov=78%
--------------PVVYEDDQYIVVSKPTSIPVYQT-GTYNYNSLMEIMKREIPSCRdlklfTVHRIDRLVSGLVAFAKSSQDASNLSQAIRDNEVKKVYIARVKGDFSylintsnsdnkesdgdadnslENVFESIGYMRVISKKEGKYEFVGENDedesyKRSVTRFKLIKYNKDlHESLVLCSPITGRTHQIRAHLKYLGYPISNDPWYNNDE----------------------------------
>UniRef50_Q2I6L3(1-177:197) RNA pseudouridylate synthase n=1 Tax=uncultured delta proteobacterium DeepAnt-32C6 RepID=Q2I6L3_9DELT  E=3e-21 s/c=0.59 id=30% cov=68%
------------------------------------------------------PGLAPAHRIDKATSGLLLCSPDPRVRARVGHWLAQGQVHKEYRAL-VFGHTHRSGRIDRPLMDRRRGRRL---------DACTRFRRLATASQ-LSYLAVYPETGRKHQIRRHLRGLGHAIVGDTRYGPTHQRPLpgcPGRLWLHLRQLELP-----EGLTFEAPLP-
>UniRef50_C5K8M1(333-520:602) Ribosomal large subunit pseudouridine synthase D, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K8M1_9ALVE  E=4e-20 s/c=0.53 id=33% cov=66%
---------------------------------------------------------RLANQLDFATSGALVLTLNKTADRETSALFQFRLTKKVYIAVCEGWVGDDELMKPRIITTGISSEGGGKMSSTIAVPVSTGH--LLCDDIKCTVYILRLLTGRRHQLRLHLSYIGHPILGDYTYSTHLPKGGrgptLPRMLLHAWRLTLP----------------
>UniRef50_Q4D881(94-431:474) RNA pseudouridylate synthase, putative n=4 Tax=Trypanosoma RepID=Q4D881_TRYCR  E=6e-20 s/c=0.29 id=29% cov=99%
----ELEPDVDEYIHVVHDDDAVIVCVKNGNLPVAEGGRYSGNTLVGLLERRDavsfvsekysaarqkmdqtreedgdagvsvhkvPASYYPIHRLDKETTGLVVLAKQLAAARALSRQFEKqseritaqvskrtdpagdglstavfekllaeeKVVTKVYVAVLAGAGPEGADFVMCDRIGLLFDSLWNEGDTEDakkhnklkklkmacfpvnlkenpkrhGRPAASRVRILSSDKKlGVSVARVDILTGRTHQIRIHCAQLGYPVLGDKLYetttpgvvggccavpddtyiarakgneglvSAAAPRLRVKRHLLHAAVLSFLHPISEERlMYFADPREW
>UniRef50_B2S2A1(106-283:345) Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S2A1_TREPS  E=1e-19 s/c=0.55 id=21% cov=76%
--------------SVVFKTQDLLFFHKPAGLCVHGprsldawvrGQGRAHVPPALS------FRPGPLHRLDRGTEGLIAFSRSLRGAQWFSAALQQHTLRKFYL--------------AITAAPARTAAAARTLVRPGE---VTHVQTVLHSCDSALVLRViVPVTGKKHQIRRYCAAQGFPLVGDRTYGGASQHGNARytRFFLLAWCVRFP----------------
>UniRef50_UPI0001903DB3(48-177:303) RNA-pseudouridine synthase protein, ribosomal large subunit C n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903DB3  E=2e-19 s/c=0.75 id=32% cov=57%
--------------MVLHEDEKVIVLNKPPGIAVQGGSGVaRHIDQMLEAWtSPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTYWALVKGVPRKHEDKISTWLVKEATADGdRMRIAKTRRKTAPT----------------------------------------------------------------------------------
>UniRef50_C7MNA2(113-251:296) Pseudouridine synthase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MNA2_CRYCD  E=3e-18 s/c=0.67 id=21% cov=64%
-----------------------LALNKPAGIITTMKDLRGRRCVADIMPTEQYPGLFPIGRLDQDTTGLLLFSTDGNLGNALLHP--SHGVSKVYRA-----------TIEGSIGQAALEQLASGILLDDGMTAPARVSVVQ-AGKKHSVIELELHEGRKHQVKRMCQAVGHPVV-------------------------------------------
>UniRef50_C1FHP0(248-561:730) rRNA/tRNA pseudouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1FHP0_9CHLO  E=3e-18 s/c=0.30 id=33% cov=80%
--------PDPSPLHVVYEDEWLMAVSKPAGVMTYPahrlrgesvvSRAVHHLSVSAARRRGRLPYSSedlpeesgvgtpvgtpggsfagawtssqvepiAVHRLDLETSGVLLLAKDKRVASELQAKFEARGVRKTYLAVCAVLEDAEAHKATATRRVDfeadvdtdvdsdadmdadvyadtdgdelgvfdesdldddddddayedpddeldeldepgvvrvvnaaigdpepgtrrsaaaDDGGRCVRAVTPDGKPARTEYQclssrlgvptqvtmpdgVTRRTVVGTALVLARPLTGRTHQVRLHLAHAGFPIVGDGLYG-------------------------------------
>UniRef50_A2F8F2(1-109:173) RNA pseudouridylate synthase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F8F2_TRIVA  E=8e-18 s/c=0.85 id=40% cov=50%
------------------------------------------------------------------------MAKSDSAAKRFTEMLNNNKIEKTYIARVLGQFPPEKKIVDLPIIESAESRAK-MVCKEGGKPSQTEFELVTTNGK-ESIVKCHPITGRTHQIRVHLASIGFPISNDVFYGG------------------------------------
>UniRef50_C2D7I2(84-260:285) Pseudouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7I2_9ACTN  E=7e-17 s/c=0.51 id=23% cov=71%
-------------------DHVYLLLNKPSQVLTTMSDPFGFPCVASLVPCDDYPGLFPVGRLDSDTTGVLLFTTNGNMGNRLLHP--SHHVWKTYVALIEGKLTssQMQKLSQGIMLEDGMTSPCFIRTITQDEPCTHLDKNHSLFDDmrlnaASSLCELKIHEGRNHQVKRMLQEIGHPVI-------------------------------------------
>UniRef50_A4QE19(138-282:320) Pseudouridine synthase n=13 Tax=Corynebacterineae RepID=A4QE19_CORGB  E=3e-16 s/c=0.60 id=20% cov=66%
------------------EDLEYFVLNKPRGMHSTMSDelGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDGELANRLMHP--KYEVSKTYLA-----------TVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGK-SLLRIEIHEGRKHIVRRLFDELGFPV--------------------------------------------
>UniRef50_B8BW13(327-581:614) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BW13_THAPS  E=9e-16 s/c=0.34 id=21% cov=93%
--------------EILDQGENYVIASKPASVIVHhsswtgkrsdPKRRWKEATPMLQRVRDATGRRvNLVHRLDRGASGCLVFSFAQneendngetppcSVTKSMIEAMQHPDARKTYLALCdgdgtwngVDYLNKGWFTFNNPVKDEWGKLIDDcctdiRFVASKVLPPTSDEDPDNMEGRKVSLILARPKTGRWHQVRQHLSSgtIGHALLGDSTHGKSRTNRIWKkdrhlmkeRTCLHLSRVQI--PATEYTpaIDISCPLP-
>UniRef50_Q65HX7(58-202:244) Pseudouridine synthase n=5 Tax=Firmicutes RepID=Q65HX7_BACLD   E=1e-15 s/c=0.59 id=24% cov=62%
-------------------------LYKPRGVIS-AVKDDKGRKVVTDFFTEVEERIYPIGRLDYDTSGLLLLTNDGDFANKLMHP--KYEINKTYVAKLKGIP-----------LKENLKKLERGVRLEDGKTAPAKVKLLSLDKKKqTSIVQITIHEGRNRQVRRMFEAIGH----------------------------------------------
>UniRef50_A5BEM4(1-112:208) Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BEM4_VITVI  E=4e-15 s/c=0.75 id=33% cov=50%
-----------------------------------------------------------IHRLDRLVSGLLILARSASKADSFRQQIEAGMVQKQYIAKVTGVFP------------DDEVGNCCGNTPLKGKSACTKFTRISTNGTH-SIVLCEPITGRTHQIRVHLQYTGHPIANDMLY--------------------------------------
>UniRef50_Q6MIA3(44-184:265) Putative pseudouridylate synthase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIA3_BDEBA  E=8e-15 s/c=0.59 id=21% cov=62%
------------------------ILNKPTGVLTTM-DDPHDRPTVAEYLTELPVRVFPVGRLDWDSEGMLLLTNDGDFANKVMHPKAE--VTKTYLVKLNGKPEPFQLE-----------KLKKGVSIVGGKVSARHIEKIKKTGDNKSekyeWYKIVITEGKNRQIRQMFAKIGF----------------------------------------------
>UniRef50_A6ET76(5-120:130) Ribosomal large subunit pseudouridine synthase D n=1 Tax=unidentified eubacterium SCB49 RepID=A6ET76_9BACT  E=2e-14 s/c=0.70 id=34% cov=40%
---------------------------------------------------------------------------------------------------------------------------------PDSKQAILHYEVIKKL-DNYYLLSIDLETGRHHQIRSQLAAIKCPIKGDLKYGFDRSNKDGS-IHLHARKITFTHPVKKEEMTILAPTP-
>UniRef50_C1DZS3(249-445:474) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DZS3_9CHLO   E=3e-14 s/c=0.41 id=30% cov=65%
------------------------------------------------------------HRLDVATSGVLVLARRSSFAAEFNDALRRRRVTKTYECVTARAVPVGVLEHWTeessgaregparfEMRELEPGDPRWRDVAADGKYSDDAFvtpdgrklcvlRVLgceetegltkrltkrlageageAGEASRAYVSTIELVTGRTHQIRAQLSAIGCPILGDVLYGGvdlsreggatPRVLRDDDRLCLHAAEMR------------------
>UniRef50_Q9CKK7(51-200:241) Ribosomal large subunit pseudouridine synthase E n=61 Tax=Bacteria RepID=RLUE_PASMU  E=5e-14 s/c=0.54 id=21% cov=54%
------------------------------------------------------PHVYPAGRLDRDSEGLVLLTNNGEIQHRLAVP--KFNTEKTYFAQVEGIPQETdlaQLRQGVVLNDGKTLPAKVRLVPEPNWLWQRNPPIRERKQIPTSWLEIKIHEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_Q2K4S3(131-266:312) Pseudouridine synthase n=10 Tax=Rhizobiaceae RepID=Q2K4S3_RHIEC   E=6e-14 s/c=0.59 id=21% cov=62%
-----------------------LMLNKPRGLVTTR-QDPEGRPTVYDCLKnFDIPHLSPVGRLDKASEGLLLFTNDTEFAQTLLDPLT--HVTKTYHVQIDR------------LMDDEEIAAMTSGIRHDGELLTAAATRRLRQGDRNSWIEVELDEGRNRQIRRMLEALG-----------------------------------------------
>UniRef50_B0RHF4(87-236:291) Pseudouridine synthase n=3 Tax=Actinobacteria (class) RepID=B0RHF4_CLAMS  E=1e-13 s/c=0.52 id=26% cov=49%
-------------------------------------------------------RLFNVGRLDAETSGLLILTNDGDLAHVLAHP--SFGVLKTYIAKVTGRVTPQTI-----------QRLTQGVDLEDGPIQADRARILSGGGDQT-LVEITLHSGRNRIVRRMLDEVGHPV--------------------------------------------
>UniRef50_B8G2X0(66-200:567) Pseudouridine synthase n=3 Tax=Bacteria RepID=B8G2X0_CHLAD   E=4e-13 s/c=0.57 id=21% cov=62%
-----------------------IMLHKPAGVVST-AEDPHGRPTVVDLV-DVPARVFPVGRLDLDSEGLILLTDDGELAYALTHP--SFEVEKEYRVLLDRALTP-----------DALRSWRNGVLLEGEMTAPAWVELLETTPEGV-WVRIVLREGRKRQIRAVAKLLGY----------------------------------------------
>UniRef50_C1MNL7(209-525:548) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MNL7_9CHLO  E=6e-13 s/c=0.24 id=30% cov=90%
---------------VVYEDEETLAVNKPHALPTQ-AHESNAAECVPGCVARALGFTGGVtdgddallvtHRLDASTSGVVVLGKTLGAVRAFNASIAgGKRVTKTYVALVENasnvrrrgvtvedattpPPPVPLGRFVHYMYPGPfgasalggrgarrsnarllrrrapsasdgdakPWRRCELVVRSCARASPrdvaawralfaesvegnanweaargvddgSRDEPSRRAGDDaVYEVEIELVTGRTHQVRAQLAALGFPILGDTLYAPMAGYLHDEgegegdlvdvdarethasellekgvvpdwPVALHAASLRWDDKL------FAAPPPW
>UniRef50_Q87QY8(63-211:238) Ribosomal large subunit pseudouridine synthase E n=244 Tax=Bacteria RepID=RLUE_VIBPA  E=7e-13 s/c=0.51 id=21% cov=51%
-------------------------------------------------------------RLDRDSEGLMVLTNDGILQAKLTQPKSKS--PKTYWVQVDGAPQEQDleKLRKGVELKDGMTLPAKVEVIDAPTIWERNPPVRFRANIPTTWLAITIIEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_C2KPR0(103-240:278) Pseudouridine synthase n=3 Tax=Mobiluncus RepID=C2KPR0_9ACTO   E=9e-13 s/c=0.55 id=28% cov=49%
-------------------------------------------------------RVFHVGRLDVATAGLILLTNNGDLANRLVHP--RYEVPKTYVAMVQGQVKPGLG-----------KVLRRGVELEDGVTKVDTFKLVEVRR-GSSIVQLTLHSGKNRVVRRLLSEVGHPV--------------------------------------------
>UniRef50_B9E1X9(71-208:245) Pseudouridine synthase n=39 Tax=Clostridium RepID=B9E1X9_CLOK1   E=9e-13 s/c=0.55 id=21% cov=63%
-----------------------ILLNKPRGYIS-SVKDDRGRKTLLD-IVKVNERVYPIGRLDYNTSGAIILTNDGEVYNNIAHPGSNKS--KIYIAAIKGIPSS-----------EEIKRFENGIDIGGYITAKAKFDFISSNKES-SKVKIEIHEGKNRQVRKMCDAIGHPVI-------------------------------------------
>UniRef50_Q9F855(66-214:241) Ribosomal large subunit pseudouridine synthase E n=107 Tax=Bacteria RepID=RLUE_VIBCH  E=1e-12 s/c=0.51 id=21% cov=51%
-------------------------------------------------------------RLDRDSEGLLILTNDGILQARLTQPQSK--APKTYWVQVEGSPQESDLEalRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFP---------------------------------------------
>UniRef50_Q7VBH8(65-204:237) Pseudouridine synthase n=1 Tax=Prochlorococcus marinus RepID=Q7VBH8_PROMA  E=2e-12 s/c=0.53 id=21% cov=64%
----------------------VILLNKPTGVIST-CRDTHGRKTVLDLLPDNLQKgMHPVGRLDKDSRGALIISNNGLLTLHLTHPRFNH--KKRYSVLITGVPS-----------KNTLKKWRNGIEIDKKTTRKALVNIVKRQGNNT-LLEIVLFEGRNRQIRKVADKLGHPVI-------------------------------------------
>UniRef50_A4BDP6(4-153:228) Pseudouridine synthase n=1 Tax=Reinekea blandensis MED297 RepID=A4BDP6_9GAMM  E=3e-12 s/c=0.49 id=22% cov=55%
----------------------------------------------------DVPEVYSAGRLDYDSEGLLLLTDDGALIHSMMNP--RFKTPKTYLAQVEGDITDEAIRRLESglqLKDGPTLPAKARRVSEPAWLWPRQPPIRERATIPASWVELTLVEGRNRQVRRMTAAVGFP---------------------------------------------
>UniRef50_Q38VQ0(53-197:239) Pseudouridine synthase n=6 Tax=Lactobacillus RepID=Q38VQ0_LACSS   E=3e-12 s/c=0.51 id=24% cov=41%
--------------PIRYQTNFYWLLNKPAGVISATTDPQK---TVMDLFapADYREDLFPVGRLDKDTTGLLLITNDGDLAHDLLSP--KKHVAKTYRAKIAGVVTAAD---------------------------------------------------------------------------------------------------------------
>UniRef50_Q8I3Z1(7359-7453:10061) MATH and LRR domain-containing protein PFE0570w n=35 Tax=Eukaryota RepID=MLRR1_PLAF7  E=6e-12 s/c=0.77 id=34% cov=30%
---------------------------------------------------------------------------------------------------------------------------------------------IENYTKEFTLCNVKIHTGRTHQIRVHMRHIGHPLVSDKKYLNPSlsnlDKFWCFRMFLHSLILEFNNP--------------
>UniRef50_C7H4Z6(61-198:235) Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z6_9FIRM  E=1e-11 s/c=0.52 id=25% cov=57%
-----------------------LMLNKPEGVVS--ASTDKRDTTVVDLIGDAYPRRelFPVGRLDKTSTGFVLLTDDGGFAHEILAP--KRHVSKTYTVV-----------IDTPLTEEMRRGFAEGVTLADG-TALSPAEVEALTPDGLT-VKVRLRQGVYHQI-------------------------------------------------------
>UniRef50_Q3MC44(92-233:288) Pseudouridine synthase n=21 Tax=Cyanobacteria RepID=Q3MC44_ANAVT   E=2e-11 s/c=0.50 id=22% cov=63%
-----------------------LLLNKPTGVVST-CYDPQGRKTVLDLLPEELRKGsglHPVGRLDAYSTGALILTNDGDLTFKLTHP--SHNIPKTYQILVKGHPPEAV-----------LKMWREGVLLDGRKTRKAKVSLLESLAEK-SRLEIVLQEGRNRQIRRVAEQLGYPVI-------------------------------------------
>UniRef50_UPI0001924EE0(45-143:153) PREDICTED: similar to predicted protein n=2 Tax=Eumetazoa RepID=UPI0001924EE0  E=4e-11 s/c=0.71 id=30% cov=41%
--------------PVIHEeiefiqnNEEVVVINKPASIPVHPCGRFRHNTIVFILGKDYgLYNLHTIHRIDRLTSGVLMFAKTSKKARELEGLVRGRLVIKEYLARVIG---------------------------------------------------------------------------------------------------------------------
>UniRef50_B9KC52(61-190:240) Pseudouridine synthase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC52_THENN  E=8e-11 s/c=0.54 id=23% cov=59%
-----------------------ILFYKPAGYVT--STRDPHSETIMEFLP-DIKGIFPVGRLDKDAEGLLLVTNDGEFAHRVISP--RWKVEKEYVVK-----------VEGEITEDKLEKLRRGVSLRDGFFAKAKH--VEKISNDT--VKIVITEGKYHQVKRMMAAVG-----------------------------------------------
>UniRef50_D2R7V9(95-232:811) Pseudouridine synthase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7V9_9PLAN  E=8e-11 s/c=0.50 id=23% cov=63%
------------------------VVNKPEGVVTT-NYDQAGRTRVIDLVPTD-ERVFAVGRLDRASEGLIIVTNDGEFANRVTHP--RYGVTKTYLVRVAGEASTA-----------ELAKLRRGIHLSDGFCKVDAIQVKRRHKQSTDMV-IQLSEGKNREIRRILARIGHKVL-------------------------------------------
>UniRef50_D0LG91(59-205:553) Pseudouridine synthase n=3 Tax=Bacteria RepID=D0LG91_HALO1   E=9e-11 s/c=0.47 id=21% cov=41%
----------------VYpEEPFYVLLNKPKGCLTAVTD-PENRPTVMEYLHGLPARVVPVGRLDFYSEGVLLLTNDGDLSARLQSP--RHHVEKTYHVKVRDQVTERH---------------------------------------------------------------------------------------------------------------
>UniRef50_B2A4P2(59-194:238) Pseudouridine synthase n=2 Tax=Clostridia RepID=B2A4P2_NATTJ   E=9e-11 s/c=0.51 id=17% cov=63%
------------------ESNVYIMLNKPKDYIT--SKDDPQGRKTVMDLIQVKERVYPVGRLDYDSRGLVLLTNDGELANRLMHP--KYNIPKTYMVKVDKLPLQ-----------DKLDNLVNGIYLEEGLCKADHVEILDTKNN---ILKIILSEGRKRQIRRMLASLG-----------------------------------------------
>UniRef50_Q2JQ37(33-179:226) Pseudouridine synthase n=10 Tax=Bacteria RepID=Q2JQ37_SYNJB   E=1e-10 s/c=0.47 id=20% cov=54%
------------------------------------------------------PRVYPVGRLDRDSEGLLLLTDDGRLNARLIDPKFGH--ERIYWVQVEGIPTPQALQQLQQGLIIQGRKTRPaqvKVLAEEPTLPPRDPPIRFRRSIPTTWLELTLREGRNRQVRRMTAAVGIP---------------------------------------------
>UniRef50_C1XNC4(61-213:257) Pseudouridine synthase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XNC4_MEIRU  E=1e-10 s/c=0.45 id=19% cov=39%
--------PSQAHIEVageplVYQKFFYLLLNKPAGYIT--STKDPSGTPITALLPEEFWRndWMPVGRLDKDTEGLLLLTTDGELLHRLTHP--RWKVTKRYY--------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q3AVD5(65-204:247) Pseudouridine synthase n=3 Tax=Cyanobacteria RepID=Q3AVD5_SYNS9   E=2e-10 s/c=0.49 id=20% cov=63%
-------------------------LNKPVGVIC-SCRDPQGRATVLDCLPHQeRSGLHPVGRLDADSRGALLLTDQGELTLRLTHPRYNHA--KTYRVLVRGIPSSQALRRWRD------------GLLLDGRLTRPARVHCLRSRGASSLLEVELKEGRNRQIRRVAELLGHPVI-------------------------------------------
>UniRef50_A0LG30(66-204:250) Pseudouridine synthase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LG30_SYNFM  E=3e-10 s/c=0.49 id=26% cov=49%
-------------------------------------------------------RLFPVGRLDFDAEGLLLLTNDGLLANRLQHP--RYGVTKTYEVAAMGHPTPA-----------ALDRLRTGVMLEEGMTAPAEVTVIGSSP-RSTRLRIVLHQGWNRQIKRMGEAVGHPVL-------------------------------------------
>UniRef50_A8SYF2(62-202:239) Pseudouridine synthase n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SYF2_9FIRM  E=3e-10 s/c=0.48 id=22% cov=57%
-------------------------LNKPAGCVS-ATKDNVHQTVIDLLNGENTKDLFPVGRLDLDTEGLLIITNDGRLAHHLLSP--AHHIAKTYYADIDGYVDDQTislFKQGIDIGDDTPTLPASLKIIEADR------------STGSSRIELTITEGRFHQ--------------------------------------------------------
>UniRef50_B5ELL5(85-222:268) Pseudouridine synthase n=3 Tax=Acidithiobacillus RepID=B5ELL5_ACIF5   E=9e-10 s/c=0.48 id=21% cov=61%
----------------------VLLLHKPRGVLTT--RQDERGRATVYDLLPGSPWLAPVGRLDQASSGLLLFSNDPHWAQRLLDP--DQHVAKTYHV-----------QIRPPLSTDTVVQLAADSVL-DGEPCLPMQIRELRCGGKTQWLEFILQEGRNRQIRRLLAA-------------------------------------------------
>UniRef50_B8LDC7(264-596:686) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDC7_THAPS  E=1e-09 s/c=0.20 id=25% cov=88%
---------------IVARDDDagYLIINKPPSTPVHARVDNlvenvassvgrmfwmERRESILNQLHDDVDRAGeyddgqatkrkrrkqkieqlvyvaTPQRLDQNTSGLLVVASKKSFASYFAKLLRTKTsgqlvtcriesksdanaeekyyrssscgVHKTYRCLVCVMPSKSSSADDTSIKsmkseveRLRKYSRERTVVRHFLEPSIRAPKAFFstvpkdvYNPESWAECllritnvsdictvvgnkpsdelavslwgesgkpdecvavvelEVELLTGRTHQIRGQLAAEGFPLVGDAQYGGAVPDDcsvwkekckgraesylDSEQLALQCCSLEFLNPRY------------
>UniRef50_Q30NZ7(64-199:228) Pseudouridine synthase n=3 Tax=Campylobacterales RepID=Q30NZ7_SULDN   E=2e-09 s/c=0.48 id=27% cov=24%
----------------------VILMNKPHGVVCsHSDSGVLIYSLLPPRWQRRNPKVSTIGRLDIDTTGAILL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_C1A8K5(63-195:237) Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8K5_GEMAT  E=2e-09 s/c=0.49 id=25% cov=61%
-----------------------IVLHKPAAVMTTR-KDPEGRATVFDLV-DDAPGLVYVGRLDFMTEGVLLLTTDGTAAHVLTHP--SHEVERTYVATVRGD------------AVTAAREARRGVKLDDGLVVPSEV-TAYPLGERRWAFELTITEGRTHEVRRICDALG-----------------------------------------------
>UniRef50_UPI00004D58A9(3-190:264) RNA pseudouridylate synthase domain containing 3 n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004D58A9  E=2e-09 s/c=0.35 id=27% cov=73%
----------------------LVAINKPQGLSITGKEQEVSVSSLLADLQQHLGlgsDLHIVKAAPKESSGLVLLSTCHMTTKRLEDYYAlCRKAQKptaSYCAVMAGVPHPAEGEIKAALKLERIEDWQLVVPVTDPskgrlerreiKRTLTRYKVLD-SADGCALVQLQPMSVFQAQLLVHSTLMFCRILGDHTY--------------------------------------
>UniRef50_A7HC79(70-208:354) Pseudouridine synthase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HC79_ANADF  E=3e-09 s/c=0.46 id=21% cov=37%
-------------------------LYKPPGCVTT-ASDPEGRPTALEYLRGVKERVFSVGRLDFDAEGAVLFTDDGELANRLAHPRYGH--RRTYLVKVRGEPPPA----------------------------------------------------------------------------------------------------------------
>UniRef50_B1M661(147-281:601) Pseudouridine synthase n=2 Tax=Alphaproteobacteria RepID=B1M661_METRJ  E=4e-09 s/c=0.47 id=27% cov=23%
----------------------LWIFHKPRGVVTT-ARDPEGRQTVFDVLPEDLPRVVAVGRLDINTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B5YJH7(64-202:237) Pseudouridine synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJH7_THEYD  E=4e-09 s/c=0.46 id=19% cov=49%
-------------------------------------------------------RIYPVGRLDFDSEGLLLLTNDGELAYKVMHP--SSQIEKTYMVKVDGIVEP-----------ETIEKLRKGIKIE-GKLAVPVSVHLVKKLKANSWIKITLHEGRKRQIRKMLERVGHPVI-------------------------------------------
>UniRef50_UPI0001BC42E2(57-197:235) ribosomal small subunit pseudouridine synthase A n=3 Tax=Fusobacterium RepID=UPI0001BC42E2  E=5e-09 s/c=0.45 id=20% cov=32%
------------------------ILHKKAGYVT--ALEDSREATVMDLLPEWviKKDLAPVGRLDKDTEGLLLFTNDGKLNHRLLSP--KSHVDKTYHA-------------------------------------------------------------------------------------------------------------------------
>UniRef50_A5CX60(67-203:241) Pseudouridine synthase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=A5CX60_VESOH  E=5e-09 s/c=0.46 id=25% cov=37%
----------------------VIILNKQAGVIC-SNRDDKGRKSVYSLLPKES-RWIMVGRLDLNTSGLLLVTNNGDLANKLMHP--SSEIDREYAVRVLGQVK------------------------------------------------------------------------------------------------------------------
>UniRef50_A6DMJ6(69-201:239) Pseudouridine synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMJ6_9BACT  E=6e-09 s/c=0.48 id=25% cov=40%
-------------------------------------------------------------RLDIDTTGLVILTDDGTWAHGITSP--KRKCEKSYLVGSVSELS------------DEDMRNLEQGVYLDGDDKITAPAKIEKIDEKT--YRLKITEGRYHQ--------------------------------------------------------
>UniRef50_C9RK28(65-205:243) Pseudouridine synthase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RK28_FIBSS  E=7e-09 s/c=0.45 id=20% cov=23%
----------------------VIMFHKPAGCVCTK-DDPQGRRTVYDYLPPGYHNFKYVGRLDLQSRGLLLF--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A5IKF7(61-190:239) Pseudouridine synthase n=5 Tax=Thermotogaceae RepID=A5IKF7_THEP1   E=9e-09 s/c=0.48 id=20% cov=56%
-----------------------ILFHKPSGYVT--STKDPHSETIMEFLPP-LKGIFPVGRLDKDAEGLLIITSDGDFAHRVISP--KWSVEKEYIVK-----------VEGEVTEDKIEKLKNGVTLRDGFFAKAKC--VEKLSNDT--LKIVITEGKYHQI-------------------------------------------------------
>UniRef50_B6W880(6-80:115) Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W880_9FIRM  E=2e-08 s/c=0.82 id=27% cov=33%
---------------------------------------------------------------------------------------------------------------------------------KGGKRIITKFYPLE-SKNNFTLLECELITGKTHQIRYSLHKNSTPIIGDRKYSKSKINYKkinLNSQALLAYKLVF-----------------
>UniRef50_C7PFL3(67-200:389) Pseudouridine synthase n=3 Tax=Bacteria RepID=C7PFL3_CHIPD   E=2e-08 s/c=0.46 id=24% cov=21%
-----------------------LALNKPPGITTT--TELHIKDNIISFVN-YPQRIFPIGRLDKDSEGLI----------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B1ZYI5(2-153:188) Pseudouridine synthase n=2 Tax=Bacteria RepID=B1ZYI5_OPITP   E=2e-08 s/c=0.40 id=16% cov=68%
----------------------LCALHKPYGVLSQFTPEPGSRWRTLAEF-GLPPAVYPLGRLDADSEGLLLLSDEPGLNTRLLNPDQAH--RREYWVQVERVPTDaalAQLQRGVKIGDYATRPCAARRLDPAPTLPPRDPPIRARKNVPDCWLALELIEGKNRQVRRMTAAIGHP---------------------------------------------
>UniRef50_Q1Q1Q0(56-201:260) Pseudouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1Q0_9BACT  E=5e-08 s/c=0.41 id=20% cov=66%
--------PIRPEAKIYY------LLNKPKDCLCT-NYDELNRLRAIDIIKNVKQRLYTIGRLDKQSEGLIIITNDGELSNKLSHP--KYEVNKTY-----------FIEIDGYLSNETITALQSGVWLAFGKTQPVRIKKMHRSFKK-SRFEMILCEGKNREIRRMLADHGH----------------------------------------------
>UniRef50_D2MQD6(62-200:231) Pseudouridylate synthase n=1 Tax=Bulleidia extructa W1219 RepID=D2MQD6_9FIRM  E=5e-08 s/c=0.43 id=20% cov=32%
-----------------------LMLYKPAGYIS--ATEGRYDPTVLELVP-NYKGLFPCGRLDKDTEGLLLMTNDGRLAHNLLSP--KKHVEKEYY--------------------------------------------------------------------------------------------------------------------------
>UniRef50_D1BMI6(42-194:232) Pseudouridine synthase n=3 Tax=Veillonella RepID=D1BMI6_VEIPT   E=2e-07 s/c=0.38 id=19% cov=55%
-------------------------FHKPKGYVT--AVEDSNHPVVMDLLPPEFIKMGvvPVGRLDKDTEGLLLLTNDGVWGHSIIN--GNKHVPKIYYV-----------EFEGTLSDEGIQRIKKGILLGDG----TQCKPAEIEFVSLHSVHVTIEEGKYHQ--------------------------------------------------------
>UniRef50_Q4Z2R8(124-281:318) Pseudouridine synthetase, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4Z2R8_PLABE  E=2e-07 s/c=0.37 id=22% cov=53%
-----------------------------------------------------------VGRLDRNTSGVLLFTNEYTWVNKLTHPKYER-VRKY--MIHIEGPVRMDALKMLANGVYLKDEDNNKKKKKKTQPAfievlREENVKIQNQIKKITVLNISIKEGRNRQIRKMFQQINQPIV-------------------------------------------
>UniRef50_B7VP37(70-207:241) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=B7VP37_VIBSL  E=3e-07 s/c=0.41 id=20% cov=22%
-----------------------ILMHKPAGTIC--SNIDEVYPSLFNYLeLEKASELHIAGRLDADTTGLVLI--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q13BM8(537-671:795) Pseudouridine synthase n=55 Tax=Alphaproteobacteria RepID=Q13BM8_RHOPS  E=4e-07 s/c=0.42 id=30% cov=21%
--------------------------HKPRGLMTTHAD-PEGRPTVFDNLPEDLPRLISIGRLDFNTEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A6GU42(35-177:214) Pseudouridine synthase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU42_9BURK  E=4e-07 s/c=0.40 id=21% cov=60%
--------------------------HKPAGYET--SHLPSHNPSVFDLLPKHYIKRGLqaAGRLDVDTTGLLLFSDDGQFIHRLIsgKVGTKQEIEKIYEV-----------TGARPFSDLQLQRLLEGVDLDDEPEIIYASRATLLADGR---LELGITTGKYHQVKRMVAAVG-----------------------------------------------
>UniRef50_UPI000196C3BC(36-188:234) hypothetical protein CATMIT_02354 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C3BC  E=9e-07 s/c=0.37 id=24% cov=30%
--------------TVIYDskilDPHplkYYIIHKPSGYVC--ANKDSHDPCLISLLPDDN--LHYVGRLDRNTTGLVILTNDLKLRKRL----------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_B8ETE9(86-223:676) Pseudouridine synthase n=1 Tax=Methylocella silvestris BL2 RepID=B8ETE9_METSB  E=1e-06 s/c=0.40 id=20% cov=62%
----------------------LFLFHKPRGLVTT-EHDPEGRPTVFDYVREHSpeaPRLVSIGRLDINTEGLLLLTNDGGLAR-VLELPATGWARR-YRVRAKGSIDQP-----------TLDRLRQGVTVEGVDYAQIE-ATLDRIQGANCWLTMSLREGKNREIKRVLEHLG-----------------------------------------------
>UniRef50_B6K8T5(145-224:254) RNA pseudouridylate synthase family protein n=3 Tax=Toxoplasma gondii RepID=B6K8T5_TOXGO  E=1e-06 s/c=0.69 id=32% cov=33%
-------------------------------------------------------KVRLCHQLDYATSGLLMLAHNQKAARIVQTLLQRREIQKEYLALVYGHPRWSEVEVETLVAPHSTHAFKMMV--------------------------------------------------------------------------------------------
>UniRef50_A8I6C3(91-225:717) Pseudouridine synthase n=6 Tax=Alphaproteobacteria RepID=A8I6C3_AZOC5  E=1e-06 s/c=0.41 id=26% cov=21%
--------------------------HKPIGVVTT-NRDPEGRTTLFELLPGHLPRLVSVGRLDINSEGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q31H34(92-224:261) Pseudouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31H34_THICR  E=2e-06 s/c=0.41 id=22% cov=22%
----------------------LMAYHKPVGVVCTHDLSVANNLVVSTGLMQHFSAMG---RLDKASEGLMIL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_Q21JF0(61-209:242) Pseudouridine synthase n=2 Tax=Gammaproteobacteria RepID=Q21JF0_SACD2  E=4e-06 s/c=0.36 id=22% cov=40%
-------------------------------------------------------------RLDVDTTGLVLLTDNGEWNHRVTSP--NKACFKRYRVKLEKPLD------------DAAIKLLSEGVMLHGEKAATLPATVELISN--TEVLLSIQEGRFHQ--------------------------------------------------------
>UniRef50_C5KSQ1(278-359:372) Sulfopyruvate decarboxylase subunit alpha, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5KSQ1_9ALVE  E=8e-06 s/c=0.65 id=45% cov=34%
-------------------------------------------------------QLYPLHRLDRVTSGIVVFAKTADAARKFEANQRSWPVTKTYIARV------------------------------TGRCSVSEA--------NESIVECIPITGRKHQIRV-----------------------------------------------------
>UniRef50_C7REA2(62-142:232) Pseudouridine synthase n=4 Tax=Anaerococcus RepID=C7REA2_ANAPD   E=2e-05 s/c=0.64 id=31% cov=21%
--------------------------NKPAGFLS---ATEDKDPTVIDLLDDFYKviDLSIAGRLDKDTTGLLLL--------------------------------------------------------------------------------------------------------------------------------------------------
>UniRef50_A1VDC0(113-254:292) Pseudouridine synthase n=3 Tax=Desulfovibrio vulgaris RepID=A1VDC0_DESVV  E=3e-05 s/c=0.36 id=18% cov=48%
-------------------------------------------------------RLYPVGRLDFFSEGLLLLTDDGDLTHRLTHP--KWHLPKYYRVLVREDIPPAALTA----------MRSGMTLAEGDRVAPVEAYIIDR-SEYGVELEMVLHQGINRQIRRMCRDLG-----------------------------------------------
>UniRef50_B3E104(72-205:256) Pseudouridine synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E104_METI4  E=0.0001 s/c=0.37 id=18% cov=46%
-------------------------------------------------------HLFSVGRLDKDSEGLLLLTNDGLLANAVLHP--RYHFAKTYIVTLCPSFEE----------KHQKDLLKGMYI--EGKRAKADKVIIENKNT----LKIVLSQGMKRQIRTMLSLLGY----------------------------------------------
>UniRef50_C1MMY3(111-256:305) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MMY3_9CHLO  E=0.0001 s/c=0.33 id=27% cov=52%
------------------------------------------------RWRARRPGVETIGRLDKDTTGLLLLTDDGDLLHRLASP--KKRVEKVY-----------ELVVDAPIPRDAVDLFASGSLTLTGEKKPClpaKLIVSERADHNRTRASLSVTEGKFHQVKRMMRAVGC----------------------------------------------
>UniRef50_A8IBT7(141-268:301) Pseudouridine synthase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IBT7_CHLRE  E=0.0002 s/c=0.38 id=33% cov=53%
----------------------LVFINKPAGVRVHGraagdvdsaggrDGGGPTLDSVMGEALRFGEQDEPklVHRLDAQASGVMVVARNADAAAWLSAAFRGKS-----------RQPRQSGRIRFPVAVDGSFY-----------PAVSSYRVRGT-GCGVTWVELTPETG------------------------------------------------------------
>UniRef50_B3PMD0(65-199:251) Pseudouridine synthase n=2 Tax=Mycoplasma RepID=B3PMD0_MYCA5   E=0.0006 s/c=0.35 id=31% cov=22%
-----------------------LVFNKPKNTICTLKDPEKRKTIYEYMGLKEYA--YSVGRLDFNSTGIILV--------------------------------------------------------------------------------------------------------------------------------------------------
