Phyre 2 alignment of P0AA37 with d1jvra_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AA37
Confidence | 2.77% | Date | Thu Jan 5 11:11:49 GMT 2012
Rank | 94 | Aligned Residues | 15
% Identity | 53% | Template | d1jvra_
SCOP info | Retroviral matrix proteins | Retroviral matrix proteins | HTLV-II matrix protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 162 | . | . | . | . | . | . | . |  | 170 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query Sequence |  | H | Q | L | R | V | H | M | L | . | A | L | G | H | P | I | L
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | Q | L | R | R | F | L | K | L | A | L | K | T | P | I | W
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions