Phyre 2 alignment of P0AA37 with d2dt5a1

Return to main results | Retrieve Phyre Job Id

Job Description | P0AA37
Confidence | 3.51% | Date | Thu Jan 5 11:11:49 GMT 2012
Rank | 74 | Aligned Residues | 18
% Identity | 28% | Template | d2dt5a1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Transcriptional repressor Rex, N-terminal domain
Resolution | 2.16

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | L | R | V | H | M | L | A | L | G | H | P | I | L | G | D | R | F | Y | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Sequence |  | Q | V | R | K | D | L | S | Y | F | G | . | . | S | Y | G | T | R | G | V | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | . | . |  |  |  |  | T | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 44 | . | . | . | . | . | 50 | . | . | . |  |  | . | . | . | . | . | . | 60 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions