BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (205 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P32668 Uncharacterized protein yijF n=84 Tax=Gammaprote... 427 e-119 UniRef50_D2ACP9 Putative uncharacterized protein n=1 Tax=Shigell... 300 1e-80 UniRef50_A6V7S4 NADH:ubiquinone oxidoreductase, Na n=10 Tax=Gamm... 222 5e-57 UniRef50_C6XRQ8 Putative uncharacterized protein n=1 Tax=Hirschi... 207 2e-52 UniRef50_C5TJJ9 NADH:ubiquinone oxidoreductase, na n=1 Tax=Neiss... 207 2e-52 UniRef50_B9D2C1 Aerobic C4-dicarboxylate transport protein n=2 T... 199 5e-50 UniRef50_B8L0L4 NADH:ubiquinone oxidoreductase, B subunit n=7 Ta... 196 3e-49 UniRef50_C6M471 Putative periplasmic protein n=2 Tax=Proteobacte... 196 3e-49 UniRef50_C2LIB0 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 196 4e-49 UniRef50_Q2S758 Uncharacterized protein conserved in bacteria n=... 186 5e-46 UniRef50_A7ZER7 NADH:ubiquinone oxidoreductase, na n=2 Tax=Campy... 186 5e-46 UniRef50_A3J212 Putative uncharacterized protein n=1 Tax=Flavoba... 185 8e-46 UniRef50_Q21JV4 Putative uncharacterized protein n=4 Tax=Bacteri... 184 2e-45 UniRef50_C0AXG9 Putative uncharacterized protein n=3 Tax=Enterob... 182 4e-45 UniRef50_Q0C0K1 Putative uncharacterized protein n=1 Tax=Hyphomo... 159 4e-38 UniRef50_Q1IQB1 Putative uncharacterized protein n=1 Tax=Candida... 157 2e-37 UniRef50_A9GPU4 Putative uncharacterized protein n=1 Tax=Sorangi... 129 6e-29 UniRef50_C6AMQ9 Putative uncharacterized protein n=1 Tax=Aggrega... 128 1e-28 UniRef50_B8H556 Putative uncharacterized protein n=2 Tax=Cauloba... 126 3e-28 UniRef50_C0EAP1 Putative uncharacterized protein n=1 Tax=Clostri... 108 7e-23 UniRef50_Q3AA40 Conserved domain protein n=1 Tax=Carboxydothermu... 108 1e-22 UniRef50_B8FVA7 Putative uncharacterized protein n=2 Tax=Desulfi... 106 4e-22 UniRef50_B8I778 Putative uncharacterized protein n=2 Tax=Clostri... 102 7e-21 UniRef50_A5N024 Putative uncharacterized protein n=3 Tax=Clostri... 96 1e-18 UniRef50_C4F9K2 Putative uncharacterized protein n=2 Tax=Collins... 94 2e-18 UniRef50_UPI0001976FE3 hypothetical protein BbifN4_05254 n=1 Tax... 91 2e-17 UniRef50_B1C9U3 Putative uncharacterized protein n=1 Tax=Anaerof... 84 4e-15 UniRef50_C4ZAL9 Putative uncharacterized protein n=4 Tax=Firmicu... 82 1e-14 UniRef50_C2BRC9 NADH:ubiquinone oxidoreductase, Na n=1 Tax=Mobil... 75 1e-12 UniRef50_C8NBX5 Periplasmic protein n=1 Tax=Cardiobacterium homi... 62 2e-08 >UniRef50_P32668 Uncharacterized protein yijF n=84 Tax=Gammaproteobacteria RepID=YIJF_ECOLI Length = 205 Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL 60 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL Sbjct: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL 60 Query: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR 120 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR Sbjct: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR 120 Query: 121 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN 180 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN Sbjct: 121 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN 180 Query: 181 IGAGAQEEDVLFNWRMVGHYRYFVK 205 IGAGAQEEDVLFNWRMVGHYRYFVK Sbjct: 181 IGAGAQEEDVLFNWRMVGHYRYFVK 205 >UniRef50_D2ACP9 Putative uncharacterized protein n=1 Tax=Shigella flexneri 2002017 RepID=D2ACP9_SHIF2 Length = 211 Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 140/147 (95%), Positives = 143/147 (97%) Query: 59 QLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID 118 QLTYPGGDVPQERGVCSD+VIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID Sbjct: 65 QLTYPGGDVPQERGVCSDMVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID 124 Query: 119 HRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVI 178 HRRVPNLETWFSRH+KTRP SKN DYQAGDIVSWRLDNGLAHIGV SDGFARDGTPLVI Sbjct: 125 HRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLAHIGVASDGFARDGTPLVI 184 Query: 179 HNIGAGAQEEDVLFNWRMVGHYRYFVK 205 HNIGAGAQEEDVLF+WRMVGHYRYFVK Sbjct: 185 HNIGAGAQEEDVLFSWRMVGHYRYFVK 211 >UniRef50_A6V7S4 NADH:ubiquinone oxidoreductase, Na n=10 Tax=Gammaproteobacteria RepID=A6V7S4_PSEA7 Length = 199 Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 103/164 (62%), Positives = 130/164 (79%), Gaps = 1/164 (0%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 + + AR Q+G TL YDPAY +L YPGGDVP + GVC+DVVIRALR Q +DLQK VHEDM Sbjct: 33 LVEAARAQVGVTLGYDPAYRKLDYPGGDVPLQTGVCTDVVIRALRGQGLDLQKAVHEDMR 92 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNG 158 ++FA YPQ+W +K D NIDHRRVPNL TWFSR + S++ + Y+AGDIV+WRLDNG Sbjct: 93 RHFAAYPQQWGMKGADRNIDHRRVPNLMTWFSRQGLSLAPSRDAAAYRAGDIVAWRLDNG 152 Query: 159 LAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY 202 L HIGV+SD A DG PLV+HNIGAG +E+D+LF ++++GHYR+ Sbjct: 153 LLHIGVLSD-RALDGRPLVLHNIGAGVREDDLLFRYQVIGHYRF 195 >UniRef50_C6XRQ8 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRQ8_HIRBI Length = 205 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/167 (58%), Positives = 121/167 (72%), Gaps = 4/167 (2%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 ++ A ++ ++ YDPAY +L YP GDV ++GVC+DVVIRALR+ +DLQKL+HEDM Sbjct: 33 LSSSAIERTHHSVTYDPAYARLDYPNGDVAPDKGVCADVVIRALRTLDIDLQKLIHEDMK 92 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNG 158 NF YPQ+W LKR D NIDHRRVPN+E + SRH S+NPSDYQAGDIV+W L Sbjct: 93 ANFDAYPQRWGLKRTDRNIDHRRVPNIEAYLSRHGMRLSPSENPSDYQAGDIVAWNLSGH 152 Query: 159 ----LAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 + HIG+V+D ARDGTPL++HNIGAG Q E VLFNW + G YR Sbjct: 153 GRGWMPHIGIVTDQKARDGTPLIVHNIGAGPQLESVLFNWPITGRYR 199 >UniRef50_C5TJJ9 NADH:ubiquinone oxidoreductase, na n=1 Tax=Neisseria flavescens SK114 RepID=C5TJJ9_NEIFL Length = 217 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/206 (49%), Positives = 139/206 (67%), Gaps = 9/206 (4%) Query: 4 SLALLSLLTAFTSHSLKSPAVPPTVVQIQANT----NLAIADGARQQIGSTLFYDPAYVQ 59 S+ L++ F H P++ +Q + + I AR QIG TL YDPAY + Sbjct: 17 SILLITTAVFFARHHNSIPSINTDFLQQEITEPEEPSPQIVQSARNQIGKTLRYDPAYTK 76 Query: 60 LTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDH 119 LTYP GDVP E+GVC+DVVIRALR Q +DLQ+LVH+DM++NF+ YP++W LK+PD+NIDH Sbjct: 77 LTYPMGDVPMEKGVCTDVVIRALREQNIDLQELVHQDMSRNFSVYPKRWGLKQPDTNIDH 136 Query: 120 RRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIH 179 RRVPNL T+F+R + ++YQAGDIV+W L HIG+VSD D PL+IH Sbjct: 137 RRVPNLMTYFTRQG----WAVQDTNYQAGDIVTWELKGNRPHIGIVSDRKIGD-RPLIIH 191 Query: 180 NIGAGAQEEDVLFNWRMVGHYRYFVK 205 NIG+G +E+DVL+ + + GH+R V+ Sbjct: 192 NIGSGTREDDVLYRYTITGHFRLPVQ 217 >UniRef50_B9D2C1 Aerobic C4-dicarboxylate transport protein n=2 Tax=Campylobacter RepID=B9D2C1_WOLRE Length = 184 Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 92/159 (57%), Positives = 115/159 (72%), Gaps = 5/159 (3%) Query: 43 ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA 102 AR Q+G TLFYDP+Y +L YP GDV RGVC+ VV+RALR Q +DLQ+L+HEDM+ NF+ Sbjct: 29 ARAQVGQTLFYDPSYERLAYPMGDVDMIRGVCTGVVVRALRGQDIDLQRLIHEDMSANFS 88 Query: 103 EYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHI 162 YP+ W K+ D NIDHRRVPN+ T+ R + +++AGDIV+WRLDNG HI Sbjct: 89 AYPKNWGAKKTDKNIDHRRVPNIATYLK-----RKGYEAKGEFKAGDIVTWRLDNGRPHI 143 Query: 163 GVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 G+VSD F TPLVIHNIG GAQEEDVL + + GH+R Sbjct: 144 GIVSDKFVAGKTPLVIHNIGLGAQEEDVLNVYEITGHFR 182 >UniRef50_B8L0L4 NADH:ubiquinone oxidoreductase, B subunit n=7 Tax=Bacteria RepID=B8L0L4_9GAMM Length = 215 Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 93/160 (58%), Positives = 114/160 (71%), Gaps = 1/160 (0%) Query: 43 ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA 102 AR QIG T+ YDPAY L YPGGDV ++RGVC+DVV+RALR +DLQ VHEDM +F Sbjct: 52 ARSQIGVTVRYDPAYQVLAYPGGDVARDRGVCTDVVVRALRDLGLDLQARVHEDMRSDFG 111 Query: 103 EYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLD-NGLAH 161 YP W L RPD NIDHRRVPNL WF R +P + DY AGDIV+W+L+ NGL H Sbjct: 112 AYPAIWGLSRPDRNIDHRRVPNLMRWFERQGWQQPVTALAIDYAAGDIVAWKLNGNGLLH 171 Query: 162 IGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 +G+VSD DGTPL++HNI G +EE++LF ++GHYR Sbjct: 172 VGIVSDRRLADGTPLILHNIARGTREENLLFQHAIIGHYR 211 >UniRef50_C6M471 Putative periplasmic protein n=2 Tax=Proteobacteria RepID=C6M471_NEISI Length = 219 Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 141/213 (66%), Gaps = 15/213 (7%) Query: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLA--------IADGARQQIGSTLF 52 + ++AL++ + HS P +P +++ ++ ++ I AR QIG TL Sbjct: 14 IAVAIALITAAAFWFYHSPYGPTIP--LIRTGSSQSITQPDRPSPKIVQSARNQIGKTLR 71 Query: 53 YDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKR 112 YD AY +L YP GDVP ++GVC+DV+IRALR Q +DLQ+LVH+DM++NF+ YP +W LK+ Sbjct: 72 YDSAYTKLKYPMGDVPMKKGVCTDVIIRALRDQNMDLQELVHQDMSRNFSAYPNRWGLKQ 131 Query: 113 PDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARD 172 PD+NIDHRRVPNL T+F+R + ++YQAGDIV+W L HIG+VSD D Sbjct: 132 PDANIDHRRVPNLMTYFTRQG----WAVQDTNYQAGDIVTWELKGNRPHIGIVSDRKIGD 187 Query: 173 GTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK 205 PL+IHNIG G +E+D+L+ + + GH+R V+ Sbjct: 188 -RPLIIHNIGLGTREDDILYRYTITGHFRLPVQ 219 >UniRef50_C2LIB0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=3 Tax=Enterobacteriaceae RepID=C2LIB0_PROMI Length = 217 Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 94/156 (60%), Positives = 111/156 (71%), Gaps = 3/156 (1%) Query: 50 TLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQK-- 107 + YDPAY ++ YP GDVP GVCSDV+IR+ R +DLQKL+HED+ NFA YP K Sbjct: 62 AVIYDPAYRKINYPNGDVPAHYGVCSDVIIRSYRGIGIDLQKLLHEDIKANFALYPSKRI 121 Query: 108 WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSD 167 W L RPD+NIDHRRVPNLE +FSR K +P SK SDY GDIVSWRLDNG HIG+V D Sbjct: 122 WGLSRPDTNIDHRRVPNLEVFFSRKGKVKPISKEASDYLPGDIVSWRLDNGRPHIGLVID 181 Query: 168 GFARDGTP-LVIHNIGAGAQEEDVLFNWRMVGHYRY 202 + D LV+HNIG G EDVLF+W++ GHY Y Sbjct: 182 KKSSDNQRYLVMHNIGFGQVAEDVLFSWKITGHYSY 217 >UniRef50_Q2S758 Uncharacterized protein conserved in bacteria n=4 Tax=Bacteria RepID=Q2S758_HAHCH Length = 201 Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 10/185 (5%) Query: 28 VVQIQANTNLAIADG---------ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVV 78 + I + LA+ADG A ++ + YD +Y + YP GDVP GVC+DVV Sbjct: 14 ITVIALFSTLAMADGEFSQRLSVAALERTNHQVVYDGSYRTIPYPNGDVPANTGVCTDVV 73 Query: 79 IRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPT 138 IRA R VDLQK VHEDM ++F+ YP+ W LK+PD+NIDHRRVPNL+T+FSRH ++ P Sbjct: 74 IRAYRQLGVDLQKEVHEDMRQHFSLYPKNWGLKKPDANIDHRRVPNLQTYFSRHGQSLPV 133 Query: 139 SKNPSDYQAGDIVSWRLDNGLAHIGVVSD-GFARDGTPLVIHNIGAGAQEEDVLFNWRMV 197 + DYQ GD+V+W L L HIG+V D G P+++HNIG G + ED+LF++ + Sbjct: 134 TDKAEDYQPGDLVTWMLPGNLPHIGIVVDKKHWLSGRPMIVHNIGRGPKLEDMLFDYPIT 193 Query: 198 GHYRY 202 GHYRY Sbjct: 194 GHYRY 198 >UniRef50_A7ZER7 NADH:ubiquinone oxidoreductase, na n=2 Tax=Campylobacter RepID=A7ZER7_CAMC1 Length = 181 Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 5/172 (2%) Query: 30 QIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDL 89 QI A + AR QIG TL YDP+Y +L YP GDV ++GVC+DVV+RALR Q +DL Sbjct: 13 QIFAFLASKFVNDARSQIGVTLSYDPSYERLAYPMGDVDIKKGVCTDVVVRALRHQDMDL 72 Query: 90 QKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGD 149 Q+L+ EDM++NFA YP+KW LK+ D NIDHRRV N+ T+ R + + + GD Sbjct: 73 QRLIFEDMSRNFASYPKKWGLKKADKNIDHRRVLNIATYLKR----KGFEVSDDKFLPGD 128 Query: 150 IVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 IV+W L L HIGV+SD F TPLVIHNIG+G QEE++L+++++ GH+R Sbjct: 129 IVTWMLPGNLPHIGVISDKFYAK-TPLVIHNIGSGVQEENILYSYKITGHFR 179 >UniRef50_A3J212 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J212_9FLAO Length = 214 Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 12/205 (5%) Query: 10 LLTAFTSHSLKSPAVPPTVVQIQANTNL---------AIADGARQQIGSTLFYDPAYVQL 60 LL F+ KS + + + + T L +++ A I + Y P YV + Sbjct: 8 LLICFSFGCKKSETISENITESKPTTQLIENPIDFYQKLSNAALSIIDPEVVYTPDYVGI 67 Query: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYP--QKWKLKRPDSNID 118 YP GDVP + GVC+DVVIRA R +DLQK VHE+M NF+ YP +KW LK D NID Sbjct: 68 KYPNGDVPAKTGVCTDVVIRAYRKLGIDLQKDVHEEMKANFSLYPNLKKWGLKTTDKNID 127 Query: 119 HRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRL-DNGLAHIGVVSDGFARDGTPLV 177 HRRVPNLE +F+R KT ++NP DY+ GD+V+W L + + HIG+V+ + +G P++ Sbjct: 128 HRRVPNLEIFFARKGKTLSITQNPKDYKTGDLVTWLLAGDAIPHIGIVTHIKSENGNPMI 187 Query: 178 IHNIGAGAQEEDVLFNWRMVGHYRY 202 +HN+G+G ED L +W++VGH+RY Sbjct: 188 VHNVGSGQVLEDCLLSWKIVGHFRY 212 >UniRef50_Q21JV4 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q21JV4_SACD2 Length = 210 Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 91/178 (51%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 29 VQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVD 88 +Q A T IA A ++ + Y YV + YP GDVP+ GVC+DVVIR R+ +D Sbjct: 28 LQAIALTGQDIASAANKRTEHFVVYTGRYVSIPYPMGDVPKNTGVCTDVVIRTYRAVGID 87 Query: 89 LQKLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQ 146 LQ+LVHED+ NF YP K W L RPD+NIDHRRVPNL+ +F R+ + P + +P DY Sbjct: 88 LQQLVHEDIKANFDAYPSKRIWGLTRPDTNIDHRRVPNLQAFFERNGTSLPITTDPEDYL 147 Query: 147 AGDIVSWRLDNGLAHIGVVSD-GFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 GDIVSW L L HIGVVSD A G PLV+HNIG G + D LF + + GHYRY Sbjct: 148 PGDIVSWMLPGNLPHIGVVSDVKHASSGVPLVVHNIGFGPKRNDALFAYTITGHYRYL 205 >UniRef50_C0AXG9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C0AXG9_9ENTR Length = 205 Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 4/175 (2%) Query: 31 IQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQ 90 I A N + + A + + YD Y ++ YP GDVP +GVCSDV+IR+ R +DLQ Sbjct: 32 ITAEQNKKLVEYA-TDLPRAVIYDSDYRKIDYPNGDVPAYKGVCSDVIIRSYRGIDIDLQ 90 Query: 91 KLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAG 148 KL+HED+ +F+ YP K W L +PD+NIDHRRVPNLE +F+R K +P +KN DY G Sbjct: 91 KLLHEDIKAHFSAYPSKRMWGLNKPDTNIDHRRVPNLEVFFTRKGKVKPITKNAEDYVPG 150 Query: 149 DIVSWRLDNGLAHIGVVSDGFARDGTP-LVIHNIGAGAQEEDVLFNWRMVGHYRY 202 DIVSWRLDNG HIG+V + + D LV+HNIG G EDVLF+W++ GH+ Y Sbjct: 151 DIVSWRLDNGRPHIGIVVNKKSWDNQRYLVMHNIGFGQVAEDVLFSWKITGHFTY 205 >UniRef50_Q0C0K1 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C0K1_HYPNA Length = 202 Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 80/161 (49%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Query: 43 ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQ-KVDLQKLVHEDMAKNF 101 AR QIG T YDPAYV L YPGGD+P++ GVC+DV+IRA R +DLQ+LVH DM NF Sbjct: 37 ARAQIGVTTGYDPAYVTLDYPGGDIPRQTGVCTDVIIRAYRDAFDMDLQELVHMDMKANF 96 Query: 102 AEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAH 161 YP+ W L R D NIDHRRVPNLE +F R R D+QAGD+V+ RL L H Sbjct: 97 PSYPRTWGLTRADRNIDHRRVPNLERYFERQGLKREAPGRREDWQAGDLVTMRLGGRLPH 156 Query: 162 IGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY 202 I + S L IHNIG G +EE++ ++ +R+ Sbjct: 157 IAIFSGHDLLTERALYIHNIGGGTREEEIRTDYDSPMRFRF 197 >UniRef50_Q1IQB1 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQB1_ACIBL Length = 199 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/168 (47%), Positives = 110/168 (65%), Gaps = 5/168 (2%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 L A AR Q+ + Y YV++ YP GDVP + G C+D +IR R+ +DLQK VHE Sbjct: 30 KLVAAASARAQV--HVRYTGEYVKIDYPNGDVPADTGACTDEIIRIYRAVGIDLQKQVHE 87 Query: 96 DMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRL 155 DMAK+ A+YP + R D+NIDHRRVPNL ++S+ + R ++ ++Y GDIV+W L Sbjct: 88 DMAKHLADYPMHGR--RTDTNIDHRRVPNLMVFYSKFGE-RLSTARTAEYLPGDIVAWNL 144 Query: 156 DNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 D HIG+V D + G V+HNIG G Q EDVLF+W+++GHYRY+ Sbjct: 145 DGKHTHIGMVVDQKSLFGRYKVLHNIGEGPQIEDVLFDWKIIGHYRYW 192 >UniRef50_A9GPU4 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GPU4_SORC5 Length = 269 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 10/166 (6%) Query: 43 ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA 102 AR ++ + YDPA+V + YP GD +RGVC+DVV+RA+R+ VDLQ+ +HED+ A Sbjct: 69 ARLEVARGVTYDPAWVAIGYPNGDPAPDRGVCTDVVVRAVRAAGVDLQEKIHEDILARRA 128 Query: 103 EYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPS---DYQAGDIVSWRLDNGL 159 Y ++RPD NIDHRRV + T+ H + P + + + ++ GDIV W L Sbjct: 129 VYTT---VERPDRNIDHRRVGPMLTYLRAHATSLPRTFDEAAARTWEPGDIVVWALKPCP 185 Query: 160 A----HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 + H+G+VSD G PLV+HNIG E+D L W ++GH+R Sbjct: 186 SCTPDHVGIVSDRKGPRGLPLVLHNIGPTPSEDDALDAWTVLGHFR 231 >UniRef50_C6AMQ9 Putative uncharacterized protein n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AMQ9_AGGAN Length = 159 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 + D A+QQI T YDPAY +L +P GDVP GVC+DVV+RA R Q++DLQ+LVH DM Sbjct: 24 LVDDAKQQINVTTSYDPAYRKLAFPMGDVPLHTGVCTDVVVRAYRHQQIDLQQLVHNDMK 83 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAG 148 K + YP++W K D+NIDHRRVPNLE +F RH K+ + + +D++AG Sbjct: 84 KAWNTYPKRWGNKSTDTNIDHRRVPNLENFFKRHGKSLSLT-DVADFKAG 132 >UniRef50_B8H556 Putative uncharacterized protein n=2 Tax=Caulobacter vibrioides RepID=B8H556_CAUCN Length = 210 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 101/181 (55%), Gaps = 21/181 (11%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALR-SQKVDLQKLVHEDM 97 +A AR QIG T+ YD +Y + YP GDV + GVCSDV+IRA R + +DLQ+ VHEDM Sbjct: 36 LAAAARAQIGVTVTYDASYRSIGYPNGDVLRTSGVCSDVLIRAARDAWDIDLQQRVHEDM 95 Query: 98 AKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRP------TSKNPSDYQA-G 148 F YP + W L PD+NIDHRRV NLE + +R P + D A G Sbjct: 96 KAAFDAYPSRREWGLTSPDANIDHRRVLNLEAFLARQKARLPLPAPRLLGGDAFDAVAPG 155 Query: 149 DIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRM-----VGHYRYF 203 DI++WRL G H+G+ G + V HN+G G +EE + WR GHYR+ Sbjct: 156 DILTWRLAGGRPHLGIAVSGPEQ---VRVAHNVGDGVREEPL---WRFKLHKPAGHYRWR 209 Query: 204 V 204 V Sbjct: 210 V 210 >UniRef50_C0EAP1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAP1_9CLOT Length = 222 Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 19/168 (11%) Query: 42 GARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNF 101 GARQ Y AY Y GG P++ GVC+DVV RA L+ LV D+A N Sbjct: 65 GARQDARRHPRYHSAY----YAGGYPPEDEGVCTDVVWRAFAHAGYSLKDLVDADIAANI 120 Query: 102 AEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSD---YQAGDIVSWRLDNG 158 EYP+ RPD NID RRV NL+ +F R+ + +P D +Q GDIV + G Sbjct: 121 GEYPR--VEGRPDPNIDFRRVKNLKVYFERN--ATALTNDPGDISQWQPGDIVIF----G 172 Query: 159 LAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWR----MVGHYRY 202 +HIG++SD RDG P +IHN G +EEDVL ++ + GHYR+ Sbjct: 173 ESHIGIISDKRNRDGVPYLIHNAGQLKREEDVLQSYHRQTPISGHYRF 220 >UniRef50_Q3AA40 Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA40_CARHZ Length = 230 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 17/175 (9%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR ++ Y AY Y GG P GVC+DV+ RA ++ DL+++V +D+ Sbjct: 64 IVQGARLEVARKPRYKSAY----YRGGYPPDNEGVCTDVIWRAFKNAGYDLKEMVDQDIK 119 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTS------KNPSDYQAGDIVS 152 ++ YP+ +PD NID RRVPNL+ +F RH ++ KN ++Q GDIV Sbjct: 120 EHPEAYPRVG--GKPDPNIDFRRVPNLDVFFRRHAQSLTLKLIPGDPKNLKEWQGGDIVV 177 Query: 153 WRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWR--MVGHYRYFVK 205 ++ HI ++SD DG P +IHN G +E D L W +VGHYR+ +K Sbjct: 178 FK---NPQHIAIISDKRRPDGVPFIIHNAGPYPREADELLWWLPGIVGHYRFPLK 229 >UniRef50_B8FVA7 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FVA7_DESHD Length = 246 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 16/172 (9%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I G ++++ Y AY Y GG P+ GVC+DV+ RAL DL+ ++ ED+ Sbjct: 71 IVAGGKEEVRKRPRYRDAY----YAGGYPPENEGVCTDVIWRALHHAGYDLKAMIDEDIR 126 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTS------KNPSDYQAGDIVS 152 +N + YP+ + + D+NID RRV NL+ +F RH + T N S +Q GDIV+ Sbjct: 127 QNTSLYPRVDEGR--DANIDFRRVQNLKVFFQRHGQELTTEVIANDVDNLSQWQPGDIVT 184 Query: 153 WRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW--RMVGHYRY 202 + L + HI ++SD DG P ++HN G A EED L +W + GHYR+ Sbjct: 185 FALPH--EHIAIISDRRRPDGIPFILHNGGPVASEEDRLLSWPSPITGHYRF 234 >UniRef50_B8I778 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B8I778_CLOCE Length = 230 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 19/177 (10%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 N I GAR +I + Y Y Y GG P+ GVC+DVV RAL++ DL+ + Sbjct: 57 NDDIVRGARMEIANRTKYQSTY----YEGGYPPKSEGVCTDVVWRALKNAGYDLKAHMDA 112 Query: 96 DMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSD------YQAGD 149 D+++N ++Y K + PD NID RRV N +F R+ T P D +Q GD Sbjct: 113 DISRNTSDY--KSGVIIPDQNIDFRRVKNQYVFFKRYATNLTTEVKPFDRKNLYEWQPGD 170 Query: 150 IVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW----RMVGHYRY 202 IV + + H+ ++SD RDG P +IHN EE++L W R++GH+R+ Sbjct: 171 IVILKNSD---HVAIISDKRRRDGVPAIIHNSSTFPMEENLLVKWSKNGRIIGHFRF 224 >UniRef50_A5N024 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A5N024_CLOK5 Length = 241 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 21/174 (12%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR++ + Y Y Y GG P+ GVC+D+V RA R +L+ +V ED+ Sbjct: 77 IVLGARKEADKKVKYKEGY----YVGGYPPENEGVCTDLVWRAFRDAGYNLKDMVDEDI- 131 Query: 99 KNFAEYPQKWKL--KRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSD------YQAGDI 150 YP ++ +PD NID RRV NL +F ++ + P+D +Q GDI Sbjct: 132 ---RNYPGDYERIEGQPDPNIDFRRVDNLYVYFKKYAASVTIELKPNDIENLKEWQPGDI 188 Query: 151 VSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW--RMVGHYRY 202 +++ + HI VVSD DG P +IHN+ A+E D + W R+ GH+R+ Sbjct: 189 ITF---DHSEHIAVVSDKRRADGIPYIIHNVPPYAREGDEIMYWMPRITGHFRF 239 >UniRef50_C4F9K2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F9K2_9ACTN Length = 258 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 13/151 (8%) Query: 55 PAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPD 114 P Y + YP G E GVC+DVV A R DLQ LV D+A+ P+ + ++ PD Sbjct: 97 PHYKSVYYPSGYPDDEHGVCTDVVAIACREAGYDLQALVAADVARR----PEAYAIEIPD 152 Query: 115 SNIDHRRVPNLETWFSRH-DKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDG 173 ID RR PNL+ +F H + ++N S+++ GDIV + HIG+VSD G Sbjct: 153 PAIDFRRTPNLKVFFDAHAQRLTSDARNISEWRGGDIVLYE-----GHIGIVSDRRNERG 207 Query: 174 TPLVIHNIGAGA--QEEDVLFNW-RMVGHYR 201 P +IH+ G EED L ++ +VGHYR Sbjct: 208 VPYLIHHSGPFQLRYEEDKLQSYGHIVGHYR 238 >UniRef50_UPI0001976FE3 hypothetical protein BbifN4_05254 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976FE3 Length = 286 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 13/168 (7%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR+ + YD Y Q YP P +RG C DVV RA R+ DL+ +V D+A Sbjct: 113 IMRGARKDALAHPAYDDGYYQGGYP----PADRGACVDVVWRAFRNAGYDLKAMVDADIA 168 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNP-SDYQAGDIVSWRLDN 157 + A Y +PD NID RR L+ +F ++ T N + +Q GDIV + + Sbjct: 169 ADRASYAS--VAAKPDPNIDFRRTGVLDVFFGKYGITLTNDVNDHAQWQQGDIVVF---D 223 Query: 158 GLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVL-FNWRM--VGHYRY 202 + HIGV+SD DG V+HN+ +E D L F+ RM GHYR+ Sbjct: 224 RVKHIGVISDKRDADGFSYVLHNMNQRQRENDYLAFSRRMGVTGHYRW 271 >UniRef50_B1C9U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9U3_9FIRM Length = 219 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 18/172 (10%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR+ + + Y AY + YP P+ GVC+DV+ A + DL+ LV +D+ Sbjct: 60 IMLGAREYVMTKPQYKSAYYKDGYP----PKGEGVCTDVIWYAFKKAGYDLKDLVDKDIK 115 Query: 99 KNFAEYPQKWKLK-RPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSD-YQAGDIVSWRLD 156 N +Y +++ PD NID RRVPNL +F ++ + T D +Q GDI+++ Sbjct: 116 NNTKDY---YRVDGSPDPNIDFRRVPNLLVFFRKNALSLTTDITKVDQWQPGDIITF--- 169 Query: 157 NGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWR---MVGHYRYFVK 205 +HIG+VSD ++G L+IH + ++++V +R + GH+R+ K Sbjct: 170 -SDSHIGIVSDKRTKNGEILIIHQ--SKFEKKEVYARYRYNDISGHFRWIYK 218 >UniRef50_C4ZAL9 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C4ZAL9_EUBR3 Length = 227 Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 17/167 (10%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I + A I + Y Y YP E GVC+DVV AL+ DL LV+ED+ Sbjct: 72 ILNNANNYIKTNPKYKSKYYNTGYP----DDEYGVCTDVVAFALKDAGYDLMVLVNEDIK 127 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNP-SDYQAGDIVSWRLDN 157 N + + + D NID RRV NL+ +F + + T N ++Q GDIV ++ Sbjct: 128 NN----KELYDIDAVDKNIDFRRVKNLKVYFDNNAISLTTDINEIEEWQGGDIVVFK--- 180 Query: 158 GLAHIGVVSDGFARDGTPLVIH--NIGAGAQEEDVLFNW-RMVGHYR 201 HIG++SD R G VIH N EED+L + ++GHYR Sbjct: 181 --KHIGIISDKRNRKGICFVIHHANPYQIYYEEDILEHRDDIIGHYR 225 >UniRef50_C2BRC9 NADH:ubiquinone oxidoreductase, Na n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRC9_9ACTO Length = 234 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 26/175 (14%) Query: 42 GARQQIGSTLFYD--PAY-VQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 G + G+ + D P Y YPGG GVC+DVV A ++ +DL++LV D Sbjct: 60 GTKMLSGAVAYLDTAPKYDGSKVYPGGVPNDGTGVCTDVVWYAAKAAGMDLRELVDADRR 119 Query: 99 KNFAEY----PQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPT-SKNPSDYQAGDIVSW 153 + Y P+ + P+ +ID+RRV NL +F RH ++ T + + + +Q GDIV W Sbjct: 120 ADPQAYAAMAPEG---EAPNPDIDYRRVRNLIVYFDRHAQSLSTDTTDVASWQPGDIVVW 176 Query: 154 RLDNGLAHIGVVSDGFARDGTPLVIHNIGAG---AQEEDVLFN----WRMVGHYR 201 + H+ ++SD G P V+H+ G G E DVL N WR HYR Sbjct: 177 K-----EHVAIISDRRNAQGLPYVLHHEGNGFWSRYEADVLGNRGKVWR---HYR 223 >UniRef50_C8NBX5 Periplasmic protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBX5_9GAMM Length = 77 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/43 (60%), Positives = 32/43 (74%) Query: 160 AHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY 202 AHIG+VSD A DG PL+IHNIG G QEE++L + + HYRY Sbjct: 33 AHIGIVSDRRAEDGAPLIIHNIGRGTQEENILNEYSRITHYRY 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P32668 Uncharacterized protein yijF n=84 Tax=Gammaprote... 331 6e-90 UniRef50_C5TJJ9 NADH:ubiquinone oxidoreductase, na n=1 Tax=Neiss... 296 3e-79 UniRef50_C6M471 Putative periplasmic protein n=2 Tax=Proteobacte... 288 6e-77 UniRef50_A3J212 Putative uncharacterized protein n=1 Tax=Flavoba... 273 3e-72 UniRef50_Q2S758 Uncharacterized protein conserved in bacteria n=... 263 2e-69 UniRef50_A6V7S4 NADH:ubiquinone oxidoreductase, Na n=10 Tax=Gamm... 261 1e-68 UniRef50_Q21JV4 Putative uncharacterized protein n=4 Tax=Bacteri... 259 4e-68 UniRef50_D2ACP9 Putative uncharacterized protein n=1 Tax=Shigell... 253 3e-66 UniRef50_A7ZER7 NADH:ubiquinone oxidoreductase, na n=2 Tax=Campy... 251 9e-66 UniRef50_C2LIB0 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 251 1e-65 UniRef50_B8L0L4 NADH:ubiquinone oxidoreductase, B subunit n=7 Ta... 249 4e-65 UniRef50_C6XRQ8 Putative uncharacterized protein n=1 Tax=Hirschi... 248 8e-65 UniRef50_C0AXG9 Putative uncharacterized protein n=3 Tax=Enterob... 246 3e-64 UniRef50_B9D2C1 Aerobic C4-dicarboxylate transport protein n=2 T... 244 1e-63 UniRef50_Q0C0K1 Putative uncharacterized protein n=1 Tax=Hyphomo... 238 7e-62 UniRef50_Q1IQB1 Putative uncharacterized protein n=1 Tax=Candida... 227 2e-58 UniRef50_Q3AA40 Conserved domain protein n=1 Tax=Carboxydothermu... 225 9e-58 UniRef50_B8FVA7 Putative uncharacterized protein n=2 Tax=Desulfi... 222 7e-57 UniRef50_C0EAP1 Putative uncharacterized protein n=1 Tax=Clostri... 220 3e-56 UniRef50_A9GPU4 Putative uncharacterized protein n=1 Tax=Sorangi... 215 9e-55 UniRef50_B8I778 Putative uncharacterized protein n=2 Tax=Clostri... 211 2e-53 UniRef50_A5N024 Putative uncharacterized protein n=3 Tax=Clostri... 209 4e-53 UniRef50_B8H556 Putative uncharacterized protein n=2 Tax=Cauloba... 194 1e-48 UniRef50_B1C9U3 Putative uncharacterized protein n=1 Tax=Anaerof... 194 2e-48 UniRef50_UPI0001976FE3 hypothetical protein BbifN4_05254 n=1 Tax... 189 5e-47 UniRef50_C4F9K2 Putative uncharacterized protein n=2 Tax=Collins... 185 9e-46 UniRef50_C4ZAL9 Putative uncharacterized protein n=4 Tax=Firmicu... 181 1e-44 UniRef50_C2BRC9 NADH:ubiquinone oxidoreductase, Na n=1 Tax=Mobil... 176 4e-43 UniRef50_C6AMQ9 Putative uncharacterized protein n=1 Tax=Aggrega... 172 7e-42 UniRef50_C8NBX5 Periplasmic protein n=1 Tax=Cardiobacterium homi... 71 2e-11 Sequences not found previously or not previously below threshold: UniRef50_C7HUG8 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Anaer... 41 0.022 UniRef50_B6WAQ2 Putative uncharacterized protein n=1 Tax=Anaeroc... 41 0.027 CONVERGED! >UniRef50_P32668 Uncharacterized protein yijF n=84 Tax=Gammaproteobacteria RepID=YIJF_ECOLI Length = 205 Score = 331 bits (850), Expect = 6e-90, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL 60 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL Sbjct: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL 60 Query: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR 120 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR Sbjct: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHR 120 Query: 121 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN 180 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN Sbjct: 121 RVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN 180 Query: 181 IGAGAQEEDVLFNWRMVGHYRYFVK 205 IGAGAQEEDVLFNWRMVGHYRYFVK Sbjct: 181 IGAGAQEEDVLFNWRMVGHYRYFVK 205 >UniRef50_C5TJJ9 NADH:ubiquinone oxidoreductase, na n=1 Tax=Neisseria flavescens SK114 RepID=C5TJJ9_NEIFL Length = 217 Score = 296 bits (757), Expect = 3e-79, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 140/209 (66%), Gaps = 9/209 (4%) Query: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANT----NLAIADGARQQIGSTLFYDPA 56 + S+ L++ F H P++ +Q + + I AR QIG TL YDPA Sbjct: 14 IVLSILLITTAVFFARHHNSIPSINTDFLQQEITEPEEPSPQIVQSARNQIGKTLRYDPA 73 Query: 57 YVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSN 116 Y +LTYP GDVP E+GVC+DVVIRALR Q +DLQ+LVH+DM++NF+ YP++W LK+PD+N Sbjct: 74 YTKLTYPMGDVPMEKGVCTDVVIRALREQNIDLQELVHQDMSRNFSVYPKRWGLKQPDTN 133 Query: 117 IDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPL 176 IDHRRVPNL T+F+R + ++YQAGDIV+W L HIG+VSD D PL Sbjct: 134 IDHRRVPNLMTYFTRQG----WAVQDTNYQAGDIVTWELKGNRPHIGIVSDRKIGD-RPL 188 Query: 177 VIHNIGAGAQEEDVLFNWRMVGHYRYFVK 205 +IHNIG+G +E+DVL+ + + GH+R V+ Sbjct: 189 IIHNIGSGTREDDVLYRYTITGHFRLPVQ 217 >UniRef50_C6M471 Putative periplasmic protein n=2 Tax=Proteobacteria RepID=C6M471_NEISI Length = 219 Score = 288 bits (738), Expect = 6e-77, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 140/213 (65%), Gaps = 15/213 (7%) Query: 1 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTN--------LAIADGARQQIGSTLF 52 + ++AL++ + HS P +P +++ ++ + I AR QIG TL Sbjct: 14 IAVAIALITAAAFWFYHSPYGPTIP--LIRTGSSQSITQPDRPSPKIVQSARNQIGKTLR 71 Query: 53 YDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKR 112 YD AY +L YP GDVP ++GVC+DV+IRALR Q +DLQ+LVH+DM++NF+ YP +W LK+ Sbjct: 72 YDSAYTKLKYPMGDVPMKKGVCTDVIIRALRDQNMDLQELVHQDMSRNFSAYPNRWGLKQ 131 Query: 113 PDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARD 172 PD+NIDHRRVPNL T+F+R + ++YQAGDIV+W L HIG+VSD D Sbjct: 132 PDANIDHRRVPNLMTYFTRQG----WAVQDTNYQAGDIVTWELKGNRPHIGIVSDRKIGD 187 Query: 173 GTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK 205 PL+IHNIG G +E+D+L+ + + GH+R V+ Sbjct: 188 -RPLIIHNIGLGTREDDILYRYTITGHFRLPVQ 219 >UniRef50_A3J212 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J212_9FLAO Length = 214 Score = 273 bits (697), Expect = 3e-72, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 12/205 (5%) Query: 10 LLTAFTSHSLKSPAVPPTVVQIQANTNL---------AIADGARQQIGSTLFYDPAYVQL 60 LL F+ KS + + + + T L +++ A I + Y P YV + Sbjct: 8 LLICFSFGCKKSETISENITESKPTTQLIENPIDFYQKLSNAALSIIDPEVVYTPDYVGI 67 Query: 61 TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYP--QKWKLKRPDSNID 118 YP GDVP + GVC+DVVIRA R +DLQK VHE+M NF+ YP +KW LK D NID Sbjct: 68 KYPNGDVPAKTGVCTDVVIRAYRKLGIDLQKDVHEEMKANFSLYPNLKKWGLKTTDKNID 127 Query: 119 HRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRL-DNGLAHIGVVSDGFARDGTPLV 177 HRRVPNLE +F+R KT ++NP DY+ GD+V+W L + + HIG+V+ + +G P++ Sbjct: 128 HRRVPNLEIFFARKGKTLSITQNPKDYKTGDLVTWLLAGDAIPHIGIVTHIKSENGNPMI 187 Query: 178 IHNIGAGAQEEDVLFNWRMVGHYRY 202 +HN+G+G ED L +W++VGH+RY Sbjct: 188 VHNVGSGQVLEDCLLSWKIVGHFRY 212 >UniRef50_Q2S758 Uncharacterized protein conserved in bacteria n=4 Tax=Bacteria RepID=Q2S758_HAHCH Length = 201 Score = 263 bits (673), Expect = 2e-69, Method: Composition-based stats. Identities = 90/185 (48%), Positives = 121/185 (65%), Gaps = 10/185 (5%) Query: 28 VVQIQANTNLAIADG---------ARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVV 78 + I + LA+ADG A ++ + YD +Y + YP GDVP GVC+DVV Sbjct: 14 ITVIALFSTLAMADGEFSQRLSVAALERTNHQVVYDGSYRTIPYPNGDVPANTGVCTDVV 73 Query: 79 IRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPT 138 IRA R VDLQK VHEDM ++F+ YP+ W LK+PD+NIDHRRVPNL+T+FSRH ++ P Sbjct: 74 IRAYRQLGVDLQKEVHEDMRQHFSLYPKNWGLKKPDANIDHRRVPNLQTYFSRHGQSLPV 133 Query: 139 SKNPSDYQAGDIVSWRLDNGLAHIGVVSDGF-ARDGTPLVIHNIGAGAQEEDVLFNWRMV 197 + DYQ GD+V+W L L HIG+V D G P+++HNIG G + ED+LF++ + Sbjct: 134 TDKAEDYQPGDLVTWMLPGNLPHIGIVVDKKHWLSGRPMIVHNIGRGPKLEDMLFDYPIT 193 Query: 198 GHYRY 202 GHYRY Sbjct: 194 GHYRY 198 >UniRef50_A6V7S4 NADH:ubiquinone oxidoreductase, Na n=10 Tax=Gammaproteobacteria RepID=A6V7S4_PSEA7 Length = 199 Score = 261 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 104/173 (60%), Positives = 131/173 (75%), Gaps = 1/173 (0%) Query: 31 IQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQ 90 A + + AR Q+G TL YDPAY +L YPGGDVP + GVC+DVVIRALR Q +DLQ Sbjct: 25 SAAVEPQRLVEAARAQVGVTLGYDPAYRKLDYPGGDVPLQTGVCTDVVIRALRGQGLDLQ 84 Query: 91 KLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDI 150 K VHEDM ++FA YPQ+W +K D NIDHRRVPNL TWFSR + S++ + Y+AGDI Sbjct: 85 KAVHEDMRRHFAAYPQQWGMKGADRNIDHRRVPNLMTWFSRQGLSLAPSRDAAAYRAGDI 144 Query: 151 VSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 V+WRLDNGL HIGV+SD A DG PLV+HNIGAG +E+D+LF ++++GHYR+ Sbjct: 145 VAWRLDNGLLHIGVLSD-RALDGRPLVLHNIGAGVREDDLLFRYQVIGHYRFP 196 >UniRef50_Q21JV4 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q21JV4_SACD2 Length = 210 Score = 259 bits (662), Expect = 4e-68, Method: Composition-based stats. Identities = 91/178 (51%), Positives = 113/178 (63%), Gaps = 3/178 (1%) Query: 29 VQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVD 88 +Q A T IA A ++ + Y YV + YP GDVP+ GVC+DVVIR R+ +D Sbjct: 28 LQAIALTGQDIASAANKRTEHFVVYTGRYVSIPYPMGDVPKNTGVCTDVVIRTYRAVGID 87 Query: 89 LQKLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQ 146 LQ+LVHED+ NF YP K W L RPD+NIDHRRVPNL+ +F R+ + P + +P DY Sbjct: 88 LQQLVHEDIKANFDAYPSKRIWGLTRPDTNIDHRRVPNLQAFFERNGTSLPITTDPEDYL 147 Query: 147 AGDIVSWRLDNGLAHIGVVSD-GFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 GDIVSW L L HIGVVSD A G PLV+HNIG G + D LF + + GHYRY Sbjct: 148 PGDIVSWMLPGNLPHIGVVSDVKHASSGVPLVVHNIGFGPKRNDALFAYTITGHYRYL 205 >UniRef50_D2ACP9 Putative uncharacterized protein n=1 Tax=Shigella flexneri 2002017 RepID=D2ACP9_SHIF2 Length = 211 Score = 253 bits (646), Expect = 3e-66, Method: Composition-based stats. Identities = 140/147 (95%), Positives = 143/147 (97%) Query: 59 QLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID 118 QLTYPGGDVPQERGVCSD+VIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID Sbjct: 65 QLTYPGGDVPQERGVCSDMVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNID 124 Query: 119 HRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVI 178 HRRVPNLETWFSRH+KTRP SKN DYQAGDIVSWRLDNGLAHIGV SDGFARDGTPLVI Sbjct: 125 HRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLAHIGVASDGFARDGTPLVI 184 Query: 179 HNIGAGAQEEDVLFNWRMVGHYRYFVK 205 HNIGAGAQEEDVLF+WRMVGHYRYFVK Sbjct: 185 HNIGAGAQEEDVLFSWRMVGHYRYFVK 211 >UniRef50_A7ZER7 NADH:ubiquinone oxidoreductase, na n=2 Tax=Campylobacter RepID=A7ZER7_CAMC1 Length = 181 Score = 251 bits (642), Expect = 9e-66, Method: Composition-based stats. Identities = 89/173 (51%), Positives = 118/173 (68%), Gaps = 5/173 (2%) Query: 29 VQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVD 88 QI A + AR QIG TL YDP+Y +L YP GDV ++GVC+DVV+RALR Q +D Sbjct: 12 TQIFAFLASKFVNDARSQIGVTLSYDPSYERLAYPMGDVDIKKGVCTDVVVRALRHQDMD 71 Query: 89 LQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAG 148 LQ+L+ EDM++NFA YP+KW LK+ D NIDHRRV N+ T+ R + + G Sbjct: 72 LQRLIFEDMSRNFASYPKKWGLKKADKNIDHRRVLNIATYLKRKG----FEVSDDKFLPG 127 Query: 149 DIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 DIV+W L L HIGV+SD F TPLVIHNIG+G QEE++L+++++ GH+R Sbjct: 128 DIVTWMLPGNLPHIGVISDKFYAK-TPLVIHNIGSGVQEENILYSYKITGHFR 179 >UniRef50_C2LIB0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit n=3 Tax=Enterobacteriaceae RepID=C2LIB0_PROMI Length = 217 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 103/196 (52%), Positives = 124/196 (63%), Gaps = 5/196 (2%) Query: 11 LTAFTSHSLKSPAVPPTVVQ-IQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQ 69 L F L +P +V Q I N + A + + YDPAY ++ YP GDVP Sbjct: 23 LKIFIFGFLSLIILPISVSQAITPTQNKQLVAYA-TDLPRAVIYDPAYRKINYPNGDVPA 81 Query: 70 ERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLET 127 GVCSDV+IR+ R +DLQKL+HED+ NFA YP K W L RPD+NIDHRRVPNLE Sbjct: 82 HYGVCSDVIIRSYRGIGIDLQKLLHEDIKANFALYPSKRIWGLSRPDTNIDHRRVPNLEV 141 Query: 128 WFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDG-TPLVIHNIGAGAQ 186 +FSR K +P SK SDY GDIVSWRLDNG HIG+V D + D LV+HNIG G Sbjct: 142 FFSRKGKVKPISKEASDYLPGDIVSWRLDNGRPHIGLVIDKKSSDNQRYLVMHNIGFGQV 201 Query: 187 EEDVLFNWRMVGHYRY 202 EDVLF+W++ GHY Y Sbjct: 202 AEDVLFSWKITGHYSY 217 >UniRef50_B8L0L4 NADH:ubiquinone oxidoreductase, B subunit n=7 Tax=Bacteria RepID=B8L0L4_9GAMM Length = 215 Score = 249 bits (636), Expect = 4e-65, Method: Composition-based stats. Identities = 92/166 (55%), Positives = 114/166 (68%), Gaps = 1/166 (0%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 + AR QIG T+ YDPAY L YPGGDV ++RGVC+DVV+RALR +DLQ VHEDM Sbjct: 48 LVAAARSQIGVTVRYDPAYQVLAYPGGDVARDRGVCTDVVVRALRDLGLDLQARVHEDMR 107 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDN- 157 +F YP W L RPD NIDHRRVPNL WF R +P + DY AGDIV+W+L+ Sbjct: 108 SDFGAYPAIWGLSRPDRNIDHRRVPNLMRWFERQGWQQPVTALAIDYAAGDIVAWKLNGN 167 Query: 158 GLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 GL H+G+VSD DGTPL++HNI G +EE++LF ++GHYR Sbjct: 168 GLLHVGIVSDRRLADGTPLILHNIARGTREENLLFQHAIIGHYRMP 213 >UniRef50_C6XRQ8 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRQ8_HIRBI Length = 205 Score = 248 bits (634), Expect = 8e-65, Method: Composition-based stats. Identities = 97/170 (57%), Positives = 121/170 (71%), Gaps = 4/170 (2%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 ++ A ++ ++ YDPAY +L YP GDV ++GVC+DVVIRALR+ +DLQKL+HE Sbjct: 30 GKRLSSSAIERTHHSVTYDPAYARLDYPNGDVAPDKGVCADVVIRALRTLDIDLQKLIHE 89 Query: 96 DMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRL 155 DM NF YPQ+W LKR D NIDHRRVPN+E + SRH S+NPSDYQAGDIV+W L Sbjct: 90 DMKANFDAYPQRWGLKRTDRNIDHRRVPNIEAYLSRHGMRLSPSENPSDYQAGDIVAWNL 149 Query: 156 DNG----LAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 + HIG+V+D ARDGTPL++HNIGAG Q E VLFNW + G YR Sbjct: 150 SGHGRGWMPHIGIVTDQKARDGTPLIVHNIGAGPQLESVLFNWPITGRYR 199 >UniRef50_C0AXG9 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=C0AXG9_9ENTR Length = 205 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 4/175 (2%) Query: 31 IQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQ 90 I A N + + A + + YD Y ++ YP GDVP +GVCSDV+IR+ R +DLQ Sbjct: 32 ITAEQNKKLVEYA-TDLPRAVIYDSDYRKIDYPNGDVPAYKGVCSDVIIRSYRGIDIDLQ 90 Query: 91 KLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAG 148 KL+HED+ +F+ YP K W L +PD+NIDHRRVPNLE +F+R K +P +KN DY G Sbjct: 91 KLLHEDIKAHFSAYPSKRMWGLNKPDTNIDHRRVPNLEVFFTRKGKVKPITKNAEDYVPG 150 Query: 149 DIVSWRLDNGLAHIGVVSDGFARDG-TPLVIHNIGAGAQEEDVLFNWRMVGHYRY 202 DIVSWRLDNG HIG+V + + D LV+HNIG G EDVLF+W++ GH+ Y Sbjct: 151 DIVSWRLDNGRPHIGIVVNKKSWDNQRYLVMHNIGFGQVAEDVLFSWKITGHFTY 205 >UniRef50_B9D2C1 Aerobic C4-dicarboxylate transport protein n=2 Tax=Campylobacter RepID=B9D2C1_WOLRE Length = 184 Score = 244 bits (623), Expect = 1e-63, Method: Composition-based stats. Identities = 92/164 (56%), Positives = 116/164 (70%), Gaps = 5/164 (3%) Query: 38 AIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDM 97 + AR Q+G TLFYDP+Y +L YP GDV RGVC+ VV+RALR Q +DLQ+L+HEDM Sbjct: 24 KLVQDARAQVGQTLFYDPSYERLAYPMGDVDMIRGVCTGVVVRALRGQDIDLQRLIHEDM 83 Query: 98 AKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDN 157 + NF+ YP+ W K+ D NIDHRRVPN+ T+ R + +++AGDIV+WRLDN Sbjct: 84 SANFSAYPKNWGAKKTDKNIDHRRVPNIATYLKRKG-----YEAKGEFKAGDIVTWRLDN 138 Query: 158 GLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYR 201 G HIG+VSD F TPLVIHNIG GAQEEDVL + + GH+R Sbjct: 139 GRPHIGIVSDKFVAGKTPLVIHNIGLGAQEEDVLNVYEITGHFR 182 >UniRef50_Q0C0K1 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C0K1_HYPNA Length = 202 Score = 238 bits (608), Expect = 7e-62, Method: Composition-based stats. Identities = 80/180 (44%), Positives = 102/180 (56%), Gaps = 1/180 (0%) Query: 25 PPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRS 84 + + AR QIG T YDPAYV L YPGGD+P++ GVC+DV+IRA R Sbjct: 19 SAGFADTAPDWTGKLLRAARAQIGVTTGYDPAYVTLDYPGGDIPRQTGVCTDVIIRAYRD 78 Query: 85 Q-KVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPS 143 +DLQ+LVH DM NF YP+ W L R D NIDHRRVPNLE +F R R Sbjct: 79 AFDMDLQELVHMDMKANFPSYPRTWGLTRADRNIDHRRVPNLERYFERQGLKREAPGRRE 138 Query: 144 DYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 D+QAGD+V+ RL L HI + S L IHNIG G +EE++ ++ +R+ Sbjct: 139 DWQAGDLVTMRLGGRLPHIAIFSGHDLLTERALYIHNIGGGTREEEIRTDYDSPMRFRFP 198 >UniRef50_Q1IQB1 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQB1_ACIBL Length = 199 Score = 227 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 3/170 (1%) Query: 34 NTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLV 93 + A + + Y YV++ YP GDVP + G C+D +IR R+ +DLQK V Sbjct: 26 LLTKKLVAAASARAQVHVRYTGEYVKIDYPNGDVPADTGACTDEIIRIYRAVGIDLQKQV 85 Query: 94 HEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSW 153 HEDMAK+ A+YP +R D+NIDHRRVPNL ++S+ + + ++Y GDIV+W Sbjct: 86 HEDMAKHLADYPMHG--RRTDTNIDHRRVPNLMVFYSKFGERLS-TARTAEYLPGDIVAW 142 Query: 154 RLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYF 203 LD HIG+V D + G V+HNIG G Q EDVLF+W+++GHYRY+ Sbjct: 143 NLDGKHTHIGMVVDQKSLFGRYKVLHNIGEGPQIEDVLFDWKIIGHYRYW 192 >UniRef50_Q3AA40 Conserved domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA40_CARHZ Length = 230 Score = 225 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 17/175 (9%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR ++ Y AY Y GG P GVC+DV+ RA ++ DL+++V +D+ Sbjct: 64 IVQGARLEVARKPRYKSAY----YRGGYPPDNEGVCTDVIWRAFKNAGYDLKEMVDQDIK 119 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPT------SKNPSDYQAGDIVS 152 ++ YP+ +PD NID RRVPNL+ +F RH ++ KN ++Q GDIV Sbjct: 120 EHPEAYPRVGG--KPDPNIDFRRVPNLDVFFRRHAQSLTLKLIPGDPKNLKEWQGGDIVV 177 Query: 153 WRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWR--MVGHYRYFVK 205 ++ HI ++SD DG P +IHN G +E D L W +VGHYR+ +K Sbjct: 178 FK---NPQHIAIISDKRRPDGVPFIIHNAGPYPREADELLWWLPGIVGHYRFPLK 229 >UniRef50_B8FVA7 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FVA7_DESHD Length = 246 Score = 222 bits (565), Expect = 7e-57, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 103/195 (52%), Gaps = 18/195 (9%) Query: 19 LKSPAV--PPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSD 76 L+ P + P Q + I G ++++ Y AY Y GG P+ GVC+D Sbjct: 49 LQVPTIECPVDKDQDGISDLEDIVAGGKEEVRKRPRYRDAY----YAGGYPPENEGVCTD 104 Query: 77 VVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTR 136 V+ RAL DL+ ++ ED+ +N + YP+ + + D+NID RRV NL+ +F RH + Sbjct: 105 VIWRALHHAGYDLKAMIDEDIRQNTSLYPRVDEGR--DANIDFRRVQNLKVFFQRHGQEL 162 Query: 137 PTSK------NPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDV 190 T N S +Q GDIV++ L + HI ++SD DG P ++HN G A EED Sbjct: 163 TTEVIANDVDNLSQWQPGDIVTFALPH--EHIAIISDRRRPDGIPFILHNGGPVASEEDR 220 Query: 191 LFNW--RMVGHYRYF 203 L +W + GHYR+ Sbjct: 221 LLSWPSPITGHYRFP 235 >UniRef50_C0EAP1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAP1_9CLOT Length = 222 Score = 220 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 73/185 (39%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Query: 23 AVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRAL 82 P Q + I GARQ Y AY Y GG P++ GVC+DVV RA Sbjct: 46 TSPTDCNQNGVDDYTDILLGARQDARRHPRYHSAY----YAGGYPPEDEGVCTDVVWRAF 101 Query: 83 RSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTS-KN 141 L+ LV D+A N EYP+ RPD NID RRV NL+ +F R+ + Sbjct: 102 AHAGYSLKDLVDADIAANIGEYPRVEG--RPDPNIDFRRVKNLKVYFERNATALTNDPGD 159 Query: 142 PSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWR----MV 197 S +Q GDIV + G +HIG++SD RDG P +IHN G +EEDVL ++ + Sbjct: 160 ISQWQPGDIVIF----GESHIGIISDKRNRDGVPYLIHNAGQLKREEDVLQSYHRQTPIS 215 Query: 198 GHYRY 202 GHYR+ Sbjct: 216 GHYRF 220 >UniRef50_A9GPU4 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GPU4_SORC5 Length = 269 Score = 215 bits (547), Expect = 9e-55, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 10/177 (5%) Query: 35 TNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVH 94 + I AR ++ + YDPA+V + YP GD +RGVC+DVV+RA+R+ VDLQ+ +H Sbjct: 61 SGDPIVARARLEVARGVTYDPAWVAIGYPNGDPAPDRGVCTDVVVRAVRAAGVDLQEKIH 120 Query: 95 EDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPS---DYQAGDIV 151 ED+ A Y ++RPD NIDHRRV + T+ H + P + + + ++ GDIV Sbjct: 121 EDILARRAVYTT---VERPDRNIDHRRVGPMLTYLRAHATSLPRTFDEAAARTWEPGDIV 177 Query: 152 SWRLDNGLA----HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFV 204 W L + H+G+VSD G PLV+HNIG E+D L W ++GH+R + Sbjct: 178 VWALKPCPSCTPDHVGIVSDRKGPRGLPLVLHNIGPTPSEDDALDAWTVLGHFRLRL 234 >UniRef50_B8I778 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B8I778_CLOCE Length = 230 Score = 211 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 21/205 (10%) Query: 11 LTAFTSHSLKSPAV--PPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVP 68 F +K + + N I GAR +I + Y Y Y GG P Sbjct: 30 AFFFLRGEVKIEKIVCQGDMDGDGIPDNDDIVRGARMEIANRTKYQSTY----YEGGYPP 85 Query: 69 QERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETW 128 + GVC+DVV RAL++ DL+ + D+++N ++Y K + PD NID RRV N + Sbjct: 86 KSEGVCTDVVWRALKNAGYDLKAHMDADISRNTSDY--KSGVIIPDQNIDFRRVKNQYVF 143 Query: 129 FSRHDKTRPTSKNPSD------YQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIG 182 F R+ T P D +Q GDIV + + H+ ++SD RDG P +IHN Sbjct: 144 FKRYATNLTTEVKPFDRKNLYEWQPGDIVILKNSD---HVAIISDKRRRDGVPAIIHNSS 200 Query: 183 AGAQEEDVLFNW----RMVGHYRYF 203 EE++L W R++GH+R+ Sbjct: 201 TFPMEENLLVKWSKNGRIIGHFRFP 225 >UniRef50_A5N024 Putative uncharacterized protein n=3 Tax=Clostridium RepID=A5N024_CLOK5 Length = 241 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 17/188 (9%) Query: 24 VPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALR 83 + + I GAR++ + Y Y Y GG P+ GVC+D+V RA R Sbjct: 62 INSDKDKDGIKDQKDIVLGARKEADKKVKYKEGY----YVGGYPPENEGVCTDLVWRAFR 117 Query: 84 SQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPS 143 +L+ +V ED+ +Y + +PD NID RRV NL +F ++ + P+ Sbjct: 118 DAGYNLKDMVDEDIRNYPGDYERIEG--QPDPNIDFRRVDNLYVYFKKYAASVTIELKPN 175 Query: 144 D------YQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW--R 195 D +Q GDI+++ + HI VVSD DG P +IHN+ A+E D + W R Sbjct: 176 DIENLKEWQPGDIITF---DHSEHIAVVSDKRRADGIPYIIHNVPPYAREGDEIMYWMPR 232 Query: 196 MVGHYRYF 203 + GH+R+ Sbjct: 233 ITGHFRFP 240 >UniRef50_B8H556 Putative uncharacterized protein n=2 Tax=Caulobacter vibrioides RepID=B8H556_CAUCN Length = 210 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 77/189 (40%), Positives = 101/189 (53%), Gaps = 21/189 (11%) Query: 31 IQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQ-KVDL 89 + + +A AR QIG T+ YD +Y + YP GDV + GVCSDV+IRA R +DL Sbjct: 28 LIPDAGRKLAAAARAQIGVTVTYDASYRSIGYPNGDVLRTSGVCSDVLIRAARDAWDIDL 87 Query: 90 QKLVHEDMAKNFAEYPQK--WKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSK------N 141 Q+ VHEDM F YP + W L PD+NIDHRRV NLE + +R P + Sbjct: 88 QQRVHEDMKAAFDAYPSRREWGLTSPDANIDHRRVLNLEAFLARQKARLPLPAPRLLGGD 147 Query: 142 PSDYQ-AGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRM---- 196 D GDI++WRL G H+G+ G + V HN+G G +EE + WR Sbjct: 148 AFDAVAPGDILTWRLAGGRPHLGIAVSGPEQ---VRVAHNVGDGVREEPL---WRFKLHK 201 Query: 197 -VGHYRYFV 204 GHYR+ V Sbjct: 202 PAGHYRWRV 210 >UniRef50_B1C9U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9U3_9FIRM Length = 219 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 12/169 (7%) Query: 39 IADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMA 98 I GAR+ + + Y AY + YP P+ GVC+DV+ A + DL+ LV +D+ Sbjct: 60 IMLGAREYVMTKPQYKSAYYKDGYP----PKGEGVCTDVIWYAFKKAGYDLKDLVDKDIK 115 Query: 99 KNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSD-YQAGDIVSWRLDN 157 N +Y + PD NID RRVPNL +F ++ + T D +Q GDI+++ Sbjct: 116 NNTKDYYRVDG--SPDPNIDFRRVPNLLVFFRKNALSLTTDITKVDQWQPGDIITF---- 169 Query: 158 GLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW-RMVGHYRYFVK 205 +HIG+VSD ++G L+IH +E + + + GH+R+ K Sbjct: 170 SDSHIGIVSDKRTKNGEILIIHQSKFEKKEVYARYRYNDISGHFRWIYK 218 >UniRef50_UPI0001976FE3 hypothetical protein BbifN4_05254 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976FE3 Length = 286 Score = 189 bits (480), Expect = 5e-47, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 90/184 (48%), Gaps = 13/184 (7%) Query: 23 AVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRAL 82 P + I GAR+ + YD Y Y GG P +RG C DVV RA Sbjct: 97 TSPVDFNGNGVDDYTDIMRGARKDALAHPAYDDGY----YQGGYPPADRGACVDVVWRAF 152 Query: 83 RSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNP 142 R+ DL+ +V D+A + A Y +PD NID RR L+ +F ++ T N Sbjct: 153 RNAGYDLKAMVDADIAADRASYASV--AAKPDPNIDFRRTGVLDVFFGKYGITLTNDVND 210 Query: 143 -SDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVL-FNWRM--VG 198 + +Q GDIV + + + HIGV+SD DG V+HN+ +E D L F+ RM G Sbjct: 211 HAQWQQGDIVVF---DRVKHIGVISDKRDADGFSYVLHNMNQRQRENDYLAFSRRMGVTG 267 Query: 199 HYRY 202 HYR+ Sbjct: 268 HYRW 271 >UniRef50_C4F9K2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F9K2_9ACTN Length = 258 Score = 185 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 17/170 (10%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 N + A I + Y Y YP G E GVC+DVV A R DLQ LV Sbjct: 82 NDDVLAAALAYIQTRPHYKSVY----YPSGYPDDEHGVCTDVVAIACREAGYDLQALVAA 137 Query: 96 DMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTS-KNPSDYQAGDIVSWR 154 D+A+ P+ + ++ PD ID RR PNL+ +F H + + +N S+++ GDIV + Sbjct: 138 DVARR----PEAYAIEIPDPAIDFRRTPNLKVFFDAHAQRLTSDARNISEWRGGDIVLYE 193 Query: 155 LDNGLAHIGVVSDGFARDGTPLVIHNIGAGA--QEEDVLFNW-RMVGHYR 201 HIG+VSD G P +IH+ G EED L ++ +VGHYR Sbjct: 194 -----GHIGIVSDRRNERGVPYLIHHSGPFQLRYEEDKLQSYGHIVGHYR 238 >UniRef50_C4ZAL9 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=C4ZAL9_EUBR3 Length = 227 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 81/170 (47%), Gaps = 17/170 (10%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 I + A I + Y Y YP E GVC+DVV AL+ DL LV+E Sbjct: 69 QTDILNNANNYIKTNPKYKSKYYNTGYP----DDEYGVCTDVVAFALKDAGYDLMVLVNE 124 Query: 96 DMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNP-SDYQAGDIVSWR 154 D+ N Y + D NID RRV NL+ +F + + T N ++Q GDIV ++ Sbjct: 125 DIKNNKELY----DIDAVDKNIDFRRVKNLKVYFDNNAISLTTDINEIEEWQGGDIVVFK 180 Query: 155 LDNGLAHIGVVSDGFARDGTPLVIHNIGAGA--QEEDVLFNW-RMVGHYR 201 HIG++SD R G VIH+ EED+L + ++GHYR Sbjct: 181 -----KHIGIISDKRNRKGICFVIHHANPYQIYYEEDILEHRDDIIGHYR 225 >UniRef50_C2BRC9 NADH:ubiquinone oxidoreductase, Na n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRC9_9ACTO Length = 234 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 14/172 (8%) Query: 36 NLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHE 95 + GA + + YD + YPGG GVC+DVV A ++ +DL++LV Sbjct: 60 GTKMLSGAVAYLDTAPKYDGS---KVYPGGVPNDGTGVCTDVVWYAAKAAGMDLRELVDA 116 Query: 96 DMAKNFAEY-PQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPT-SKNPSDYQAGDIVSW 153 D + Y + + P+ +ID+RRV NL +F RH ++ T + + + +Q GDIV W Sbjct: 117 DRRADPQAYAAMAPEGEAPNPDIDYRRVRNLIVYFDRHAQSLSTDTTDVASWQPGDIVVW 176 Query: 154 RLDNGLAHIGVVSDGFARDGTPLVIHNIGAGA---QEEDVLFNW-RMVGHYR 201 + H+ ++SD G P V+H+ G G E DVL N ++ HYR Sbjct: 177 K-----EHVAIISDRRNAQGLPYVLHHEGNGFWSRYEADVLGNRGKVWRHYR 223 >UniRef50_C6AMQ9 Putative uncharacterized protein n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AMQ9_AGGAN Length = 159 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Query: 29 VQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVD 88 + + A + D A+QQI T YDPAY +L +P GDVP GVC+DVV+RA R Q++D Sbjct: 14 LPLFAINPQQLVDDAKQQINVTTSYDPAYRKLAFPMGDVPLHTGVCTDVVVRAYRHQQID 73 Query: 89 LQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAG 148 LQ+LVH DM K + YP++W K D+NIDHRRVPNLE +F RH K+ + + +D++AG Sbjct: 74 LQQLVHNDMKKAWNTYPKRWGNKSTDTNIDHRRVPNLENFFKRHGKSLSLT-DVADFKAG 132 >UniRef50_C8NBX5 Periplasmic protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBX5_9GAMM Length = 77 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 26/46 (56%), Positives = 33/46 (71%) Query: 157 NGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRY 202 + AHIG+VSD A DG PL+IHNIG G QEE++L + + HYRY Sbjct: 30 DARAHIGIVSDRRAEDGAPLIIHNIGRGTQEENILNEYSRITHYRY 75 >UniRef50_C7HUG8 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUG8_9FIRM Length = 542 Score = 41.1 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 10/106 (9%) Query: 96 DMAKNFAEYPQKWKLKRPD----SNIDHRRVPNLETWFSRHDK---TRPTSKNPSDYQAG 148 ++A+ F YP W P S + + + +R+ + S ++ Q G Sbjct: 428 NIARQFVGYPYVWGGASPSGFDCSGLVYYAYKQIGVNLNRNSAAQFSNGYSVGINNLQPG 487 Query: 149 DIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW 194 D+V + + H+G++ D +G + + G G Q ++ +W Sbjct: 488 DLVFFNQSGSIDHVGMIVD---YNGNYVHAVSPGVGVQIGNIYNSW 530 >UniRef50_B6WAQ2 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAQ2_9FIRM Length = 483 Score = 40.7 bits (94), Expect = 0.027, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 12/108 (11%) Query: 95 EDMAKNFAEYPQKWKLKRPDSNID--------HRRVPNLETWFSRHDKTRPTSKNPSDYQ 146 ++A F P W P S D +R+V + S+ T S + S Q Sbjct: 368 ANIASQFIGTPYVWGGTSP-SGFDCSGLVQYAYRQVGVNISRTSQQQATNGYSVSLSSLQ 426 Query: 147 AGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNW 194 AGDI+ + + H+G+V+D G + N G +V W Sbjct: 427 AGDILLFSYGGSVDHVGIVTD---SSGNFVHASNPSTGVITGNVYDPW 471 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.141 0.453 Lambda K H 0.267 0.0434 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 947,929,414 Number of Sequences: 3077464 Number of extensions: 43044627 Number of successful extensions: 93705 Number of sequences better than 1.0e-01: 32 Number of HSP's better than 0.1 without gapping: 56 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 93515 Number of HSP's gapped (non-prelim): 64 length of query: 205 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 82 effective length of database: 661,868,284 effective search space: 54273199288 effective search space used: 54273199288 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 90 (39.2 bits)