10/01/2012 04:00:18 : INFO  : Run start: Tue Jan 10 04:00:18 GMT 2012
10/01/2012 04:00:20 : INFO  : Initialised job
10/01/2012 04:00:21 : INFO  : Renaming log file 'phyre2_20120110_040017.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/phyre_20120110_040017.log'
10/01/2012 04:00:22 : INFO  : Initialised job:
Sequence
>batch____
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRF
ATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ

10/01/2012 04:00:22 : INFO  : Checked sequence
10/01/2012 04:00:24 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 04:00:24 : INFO  : PSI-BLAST 3 iterations
10/01/2012 04:01:01 : INFO  : PSI-BLAST 5 iterations
10/01/2012 04:02:04 : INFO  : Finished PSI-BLAST
10/01/2012 04:02:05 : INFO  : Running Buildali to generate a3m file
10/01/2012 04:03:17 : INFO  : Converting to HMM
10/01/2012 04:03:18 : INFO  : Calibrating HMM
10/01/2012 04:03:23 : INFO  : Searching HMM database
10/01/2012 04:05:56 : INFO  : Finished buildali
10/01/2012 04:05:57 : INFO  : Predicting secondary structure
10/01/2012 04:06:00 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 04:06:01 : INFO  : Predicting Disordered regions
10/01/2012 04:06:03 : INFO  : Predicted Disorder (Disopred)
10/01/2012 04:06:03 : INFO  : Running memsat_svm check
10/01/2012 04:07:47 : INFO  : Globular protein
10/01/2012 04:07:47 : INFO  : Predicted Transmembrane (memsat_svm) ID '857c1e6f8329246b'
10/01/2012 04:07:48 : INFO  : Initialising fold library search
10/01/2012 04:07:49 : INFO  : Initialised search input
10/01/2012 04:07:50 : INFO  : Building Ensemble models
10/01/2012 04:07:52 : INFO  : Building hh.c2oqgA_.model.1.pdb
10/01/2012 04:07:59 : INFO  : Building hh.c1r22B_.model.2.pdb
10/01/2012 04:08:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.c1r22B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/c1r22B_.1.pdb
10/01/2012 04:08:06 : INFO  : Building hh.c2jscB_.model.3.pdb
10/01/2012 04:08:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.c2jscB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/c2jscB_.3.pdb
10/01/2012 04:08:14 : INFO  : Building hh.c2zkzC_.model.4.pdb
10/01/2012 04:08:21 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.c2zkzC_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/c2zkzC_.4.pdb
10/01/2012 04:08:23 : INFO  : Building hh.c3cuoB_.model.5.pdb
10/01/2012 04:08:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.c3cuoB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/c3cuoB_.5.pdb
10/01/2012 04:08:32 : INFO  : Building hh.d1r1ta_.model.6.pdb
10/01/2012 04:08:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.d1r1ta_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/d1r1ta_.6.pdb
10/01/2012 04:08:39 : INFO  : Building hh.c3eyyA_.model.7.pdb
10/01/2012 04:08:44 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/hh.c3eyyA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/857c1e6f8329246b/c3eyyA_.44.pdb
10/01/2012 04:08:46 : INFO  : Building c1r22B_.1.pdb
10/01/2012 04:08:52 : INFO  : Building c2oqgA_.2.pdb
10/01/2012 04:08:58 : INFO  : Building c2jscB_.3.pdb
10/01/2012 04:09:05 : INFO  : Building c2zkzC_.4.pdb
10/01/2012 04:09:12 : INFO  : Building c3cuoB_.5.pdb
10/01/2012 04:09:18 : INFO  : Building d1r1ta_.6.pdb
10/01/2012 04:09:25 : INFO  : Building d1u2wa1.7.pdb
10/01/2012 04:09:32 : INFO  : Building c3pqkD_.8.pdb
10/01/2012 04:09:38 : INFO  : Building d2htja1.9.pdb
10/01/2012 04:09:45 : INFO  : Building d1r1ua_.10.pdb
10/01/2012 04:09:51 : INFO  : Building c2kkoB_.11.pdb
10/01/2012 04:09:58 : INFO  : Building c3jthA_.12.pdb
10/01/2012 04:10:04 : INFO  : Building c3f6vA_.13.pdb
10/01/2012 04:10:10 : INFO  : Building c3f6oB_.14.pdb
10/01/2012 04:10:17 : INFO  : Building d2d1ha1.15.pdb
10/01/2012 04:10:26 : INFO  : Building d1ulya_.16.pdb
10/01/2012 04:10:33 : INFO  : Building d1z05a1.17.pdb
10/01/2012 04:10:40 : INFO  : Building d1ub9a_.18.pdb
10/01/2012 04:10:46 : INFO  : Building d1sfxa_.19.pdb
10/01/2012 04:10:53 : INFO  : Building d1biaa1.20.pdb
10/01/2012 04:11:45 : INFO  : Finished HH model building
10/01/2012 04:11:46 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 04:12:29 : INFO  : html domain output complete ID '857c1e6f8329246b'
10/01/2012 04:16:50 : WARN  : Failed to run assembler on model
10/01/2012 04:16:53 : WARN  : Failed to add sidechains, using backbone only
10/01/2012 04:18:42 : INFO  : Run end  : Tue Jan 10 04:18:42 GMT 2012
