BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (107 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobact... 220 1e-56 UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escheri... 136 2e-31 UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae ... 94 1e-18 UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronoba... 86 5e-16 UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succ... 44 0.001 UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=... 42 0.005 UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcaniv... 41 0.010 UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisser... 40 0.022 >UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobacteriaceae RepID=YECR_ECOLI Length = 107 Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA Sbjct: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL Sbjct: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 >UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LNZ3_ESCF3 Length = 111 Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 62/101 (61%), Positives = 77/101 (76%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 M+++ L+L L+TL+GCTVTRQAHVSE+D +VRL + Q LQ A TD YV++G+A+ A Sbjct: 1 MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHS 101 C Q G+ AV +GQPV CSLFAGSLCLNT FTLSYQC S Sbjct: 61 CLQSGFGQAVAYGQPVATCSLFAGSLCLNTTFTLSYQCQPS 101 >UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae RepID=A4WBS4_ENT38 Length = 112 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 56/88 (63%) Query: 16 CTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQP 75 C VTRQA V+ D+ +G+VRL QA LQ++H D YV+ G A R CQ GY A +GQP Sbjct: 16 CNVTRQAQVNSADSTSGVVRLNMGQAILQNSHYDSYVTNGTATRECQAMGYATASAYGQP 75 Query: 76 VGNCSLFAGSLCLNTEFTLSYQCHHSAF 103 + C++ +GS+CLN T+ Y+C A Sbjct: 76 IKTCTVVSGSVCLNESVTIQYKCQGYAI 103 >UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XV50_CROTZ Length = 128 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 55/99 (55%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MR +I +L+ L+GCT+T+ + TG VRL + LQHA D YV++ +A+R Sbjct: 18 MRKVIFITALLALSGCTITKTPEIVGGSKVTGTVRLGISEQPLQHAKVDNYVAQSMANRQ 77 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCH 99 CQ GY A +G PV CS+ G+ C+ L YQC Sbjct: 78 CQDWGYAVAEAYGAPVKTCSVVTGTQCMTESIVLEYQCR 116 >UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VKB1_ACTSZ Length = 101 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Query: 2 RLLILTLSLITLAGCTVTRQAHVSEVDA-ATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +LL+L + +L C ++ +V+ + A G++ L Y + + A + +A + Sbjct: 3 KLLMLICMVCSLTACVSEQKRYVATGGSRADGVINLSYQVRYNERAAPNPNQGLRLAQKR 62 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQC 98 C+Q GY +A F C++ G CL+ T+ YQC Sbjct: 63 CRQWGYQNAERFSGYTRRCNIAKGRKCLSYLITVQYQC 100 >UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BJQ2_9BACT Length = 129 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Query: 1 MRLLIL-TLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADR 59 M++ L T+ ++TL+GC T+ + A VRL Y+ + + T+ + +A Sbjct: 19 MKIFALATVVILTLSGCATTKSWSATGGSRADATVRLSYEYSVYEKPQTNETEAINLATA 78 Query: 60 ACQQEGYTHAVPFGQPVGNCSLFAG-SLCLNTEFTLSYQC 98 C+ GY+ A FG C++ G C T +QC Sbjct: 79 RCKTWGYSGAEAFGGVTQQCNMPGGMGGCQRFLVTKEFQC 118 >UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VRL9_ALCBS Length = 108 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 2/103 (1%) Query: 4 LILTLSLITLAGC-TVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQ 62 LI L+ +L C T V++ + A G V L D + +Q+ D A CQ Sbjct: 5 LIAVLAFASLTACVTPASPIRVADGNQAEGSVTLATDYSLMQNPQIDWQQGLQKASTQCQ 64 Query: 63 QEGYTHAVPFGQPVGNC-SLFAGSLCLNTEFTLSYQCHHSAFP 104 GY A+P G+P C + C+ ++QC P Sbjct: 65 GWGYNGAIPSGKPKRTCNNETQDGNCIGWTVNATFQCTGPNQP 107 >UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EL23_NEIFL Length = 126 Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 31/72 (43%) Query: 30 ATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLN 89 A GIV++ YD A+ + +R S+ A + C GY+ A FG C G C Sbjct: 9 ADGIVKMAYDYAWFESPMINREASQEQAVKRCNAWGYSDAEAFGTSSKQCIENNGFGCER 68 Query: 90 TEFTLSYQCHHS 101 YQC S Sbjct: 69 FRVITEYQCTGS 80 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobact... 156 3e-37 UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronoba... 141 8e-33 UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escheri... 138 6e-32 UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succ... 122 3e-27 UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae ... 112 3e-24 Sequences not found previously or not previously below threshold: UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=... 71 1e-11 UniRef50_A8G1K8 Putative lipoprotein n=1 Tax=Shewanella sedimini... 66 3e-10 UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisser... 57 2e-07 UniRef50_D0WAQ1 Putative lipoprotein n=1 Tax=Neisseria lactamica... 57 2e-07 UniRef50_Q1I8D1 Putative uncharacterized protein n=2 Tax=Pseudom... 57 3e-07 UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcaniv... 56 3e-07 UniRef50_Q775B6 Bbp28 n=2 Tax=Bpp-1-like viruses RepID=Q775B6_9CAUD 52 7e-06 UniRef50_B0RRY4 Putative uncharacterized protein n=1 Tax=Xanthom... 52 7e-06 UniRef50_B0TQR9 Putative lipoprotein n=1 Tax=Shewanella halifaxe... 51 9e-06 >UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobacteriaceae RepID=YECR_ECOLI Length = 107 Score = 156 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA Sbjct: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL Sbjct: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 >UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XV50_CROTZ Length = 128 Score = 141 bits (354), Expect = 8e-33, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 55/103 (53%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MR +I +L+ L+GCT+T+ + TG VRL + LQHA D YV++ +A+R Sbjct: 18 MRKVIFITALLALSGCTITKTPEIVGGSKVTGTVRLGISEQPLQHAKVDNYVAQSMANRQ 77 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAF 103 CQ GY A +G PV CS+ G+ C+ L YQC Sbjct: 78 CQDWGYAVAEAYGAPVKTCSVVTGTQCMTESIVLEYQCRGFTI 120 >UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LNZ3_ESCF3 Length = 111 Score = 138 bits (347), Expect = 6e-32, Method: Composition-based stats. Identities = 62/101 (61%), Positives = 77/101 (76%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 M+++ L+L L+TL+GCTVTRQAHVSE+D +VRL + Q LQ A TD YV++G+A+ A Sbjct: 1 MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHS 101 C Q G+ AV +GQPV CSLFAGSLCLNT FTLSYQC S Sbjct: 61 CLQSGFGQAVAYGQPVATCSLFAGSLCLNTTFTLSYQCQPS 101 >UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VKB1_ACTSZ Length = 101 Score = 122 bits (306), Expect = 3e-27, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Query: 2 RLLILTLSLITLAGCTVTRQAHVSEVDA-ATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +LL+L + +L C ++ +V+ + A G++ L Y + + A + +A + Sbjct: 3 KLLMLICMVCSLTACVSEQKRYVATGGSRADGVINLSYQVRYNERAAPNPNQGLRLAQKR 62 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQC 98 C+Q GY +A F C++ G CL+ T+ YQC Sbjct: 63 CRQWGYQNAERFSGYTRRCNIAKGRKCLSYLITVQYQC 100 >UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae RepID=A4WBS4_ENT38 Length = 112 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 48/103 (46%), Positives = 66/103 (64%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 M+ L L +L+ LAGC VTRQA V+ D+ +G+VRL QA LQ++H D YV+ G A R Sbjct: 1 MKKLFLAGALLLLAGCNVTRQAQVNSADSTSGVVRLNMGQAILQNSHYDSYVTNGTATRE 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAF 103 CQ GY A +GQP+ C++ +GS+CLN T+ Y+C A Sbjct: 61 CQAMGYATASAYGQPIKTCTVVSGSVCLNESVTIQYKCQGYAI 103 >UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BJQ2_9BACT Length = 129 Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Query: 1 MRLLIL-TLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADR 59 M++ L T+ ++TL+GC T+ + A VRL Y+ + + T+ + +A Sbjct: 19 MKIFALATVVILTLSGCATTKSWSATGGSRADATVRLSYEYSVYEKPQTNETEAINLATA 78 Query: 60 ACQQEGYTHAVPFGQPVGNCSLFAG-SLCLNTEFTLSYQCHHSA 102 C+ GY+ A FG C++ G C T +QC + Sbjct: 79 RCKTWGYSGAEAFGGVTQQCNMPGGMGGCQRFLVTKEFQCTGTG 122 >UniRef50_A8G1K8 Putative lipoprotein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G1K8_SHESH Length = 101 Score = 66.3 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +++ + L+T++GC + +VRL Y+ L D +A Sbjct: 5 LKISLAAAVLLTVSGCATQNDWGAVGGSKSDAVVRLSYELGALDKHTPDESDGLKLAKLR 64 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQC 98 C G++ A PF C A C + T YQC Sbjct: 65 CGYWGFSGAKPFDVETKTC---ADEQCRSYTITKEYQC 99 >UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EL23_NEIFL Length = 126 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 31/76 (40%) Query: 26 EVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGS 85 A GIV++ YD A+ + +R S+ A + C GY+ A FG C G Sbjct: 5 SGSKADGIVKMAYDYAWFESPMINREASQEQAVKRCNAWGYSDAEAFGTSSKQCIENNGF 64 Query: 86 LCLNTEFTLSYQCHHS 101 C YQC S Sbjct: 65 GCERFRVITEYQCTGS 80 >UniRef50_D0WAQ1 Putative lipoprotein n=1 Tax=Neisseria lactamica ATCC 23970 RepID=D0WAQ1_NEILA Length = 151 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 33/103 (32%), Gaps = 9/103 (8%) Query: 5 ILTLSLITLAGCTVTRQA----HVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 L + + L GC V + A G V L Y+Q F +A Sbjct: 4 YLLIVVCFLTGCGVRSVRLPEWQAIDGSHADGTVTLAYEQNFRSRLIPRIGQDNEVAKTR 63 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSL-----CLNTEFTLSYQC 98 C+ GY A FG +C CL F YQC Sbjct: 64 CRVWGYNSAEAFGGSTRSCVATPARANAKVPCLIWRFEKRYQC 106 >UniRef50_Q1I8D1 Putative uncharacterized protein n=2 Tax=Pseudomonas RepID=Q1I8D1_PSEE4 Length = 102 Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%) Query: 15 GCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQ 74 GC +Q + G+V++ Y+Q + +D +A C+ GY +A G Sbjct: 17 GCATPKQWEATGGSKNDGLVQVSYEQGQFESGQSDAAQGLQVATARCKTWGYRNAEITGS 76 Query: 75 PVGNCSLFAGSLCLNTEFTLSYQCH 99 C CL T T Y C Sbjct: 77 EKSICRTMGQFNCLQTTVTQDYLCQ 101 >UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VRL9_ALCBS Length = 108 Score = 55.9 bits (133), Expect = 3e-07, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 2/106 (1%) Query: 1 MRLLILTLSLITLAGCTVTRQA-HVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADR 59 + LI L+ +L C V++ + A G V L D + +Q+ D A Sbjct: 2 LTRLIAVLAFASLTACVTPASPIRVADGNQAEGSVTLATDYSLMQNPQIDWQQGLQKAST 61 Query: 60 ACQQEGYTHAVPFGQPVGNC-SLFAGSLCLNTEFTLSYQCHHSAFP 104 CQ GY A+P G+P C + C+ ++QC P Sbjct: 62 QCQGWGYNGAIPSGKPKRTCNNETQDGNCIGWTVNATFQCTGPNQP 107 >UniRef50_Q775B6 Bbp28 n=2 Tax=Bpp-1-like viruses RepID=Q775B6_9CAUD Length = 118 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 12/109 (11%) Query: 2 RLLILTLSLITLAGCTVTRQAH---VSEVDAATGIVRLVYDQ-----AFLQHAHTDRYVS 53 + L++ + ++ LAGC + + A G V L D D + Sbjct: 5 KKLLIAIGVLFLAGCAAPMERANWVMVGGSKADGSVTLGIDVPAKYGVTETPVEWDINQA 64 Query: 54 RGIADRACQQEGYTHAVPF--GQP--VGNCSLFAGSLCLNTEFTLSYQC 98 ADR C+ GY+ A + GQ + C S C + + + YQC Sbjct: 65 NTEADRRCKNWGYSGADMYREGQFPILKTCHAQGVSPCWSKTYRVQYQC 113 >UniRef50_B0RRY4 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RRY4_XANCB Length = 108 Score = 51.6 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 9 SLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTH 68 ++ + C +++ A G++ L Y++ Q + +A++ C+ GY Sbjct: 11 VVLLVGACATHADWLPTKMSRADGVIALSYERNEFQRTDLSEQQAIHLAEQKCRNWGYKG 70 Query: 69 AVPFGQPVGNCSLFAG-SLCLNTEFTLSYQCHHS 101 A PFG C G C + T+ +QC S Sbjct: 71 AEPFGSQSTECLSRRGFGNCGSRRVTVEFQCTGS 104 >UniRef50_B0TQR9 Putative lipoprotein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQR9_SHEHH Length = 117 Score = 51.3 bits (121), Expect = 9e-06, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 8/107 (7%) Query: 5 ILTLSLITLAGCTVTRQAHVS---EVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRAC 61 +T S+ GC + + G++ + Y + + + + +A + C Sbjct: 9 FITTSVTVFTGCASAPKNFTLDTFSGSRSDGVIEMGYLGGYGWVKNVNWAATGELASQRC 68 Query: 62 QQEGYTHAVPFGQPVGNCSLFAG-----SLCLNTEFTLSYQCHHSAF 103 + GY A FG C G +C ++T+ YQC Sbjct: 69 RSWGYEDAERFGLGHAICIEDNGAGGAFKMCTTAKYTVEYQCTGKMI 115 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobact... 141 9e-33 UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronoba... 128 6e-29 UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=... 124 1e-27 UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escheri... 122 3e-27 UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succ... 118 7e-26 UniRef50_A8G1K8 Putative lipoprotein n=1 Tax=Shewanella sedimini... 117 2e-25 UniRef50_B0RRY4 Putative uncharacterized protein n=1 Tax=Xanthom... 114 1e-24 UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcaniv... 113 2e-24 UniRef50_D0WAQ1 Putative lipoprotein n=1 Tax=Neisseria lactamica... 113 2e-24 UniRef50_B0TQR9 Putative lipoprotein n=1 Tax=Shewanella halifaxe... 108 6e-23 UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisser... 106 2e-22 UniRef50_Q1I8D1 Putative uncharacterized protein n=2 Tax=Pseudom... 103 2e-21 UniRef50_Q775B6 Bbp28 n=2 Tax=Bpp-1-like viruses RepID=Q775B6_9CAUD 102 3e-21 UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae ... 101 7e-21 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P76308 Uncharacterized protein yecR n=88 Tax=Enterobacteriaceae RepID=YECR_ECOLI Length = 107 Score = 141 bits (354), Expect = 9e-33, Method: Composition-based stats. Identities = 107/107 (100%), Positives = 107/107 (100%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA Sbjct: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL Sbjct: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL 107 >UniRef50_C9XV50 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=C9XV50_CROTZ Length = 128 Score = 128 bits (321), Expect = 6e-29, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 55/103 (53%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 MR +I +L+ L+GCT+T+ + TG VRL + LQHA D YV++ +A+R Sbjct: 18 MRKVIFITALLALSGCTITKTPEIVGGSKVTGTVRLGISEQPLQHAKVDNYVAQSMANRQ 77 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAF 103 CQ GY A +G PV CS+ G+ C+ L YQC Sbjct: 78 CQDWGYAVAEAYGAPVKTCSVVTGTQCMTESIVLEYQCRGFTI 120 >UniRef50_B0BJQ2 Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BJQ2_9BACT Length = 129 Score = 124 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Query: 1 MRLLILTLSL-ITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADR 59 M++ L + +TL+GC T+ + A VRL Y+ + + T+ + +A Sbjct: 19 MKIFALATVVILTLSGCATTKSWSATGGSRADATVRLSYEYSVYEKPQTNETEAINLATA 78 Query: 60 ACQQEGYTHAVPFGQPVGNCSLFAG-SLCLNTEFTLSYQCHHSA 102 C+ GY+ A FG C++ G C T +QC + Sbjct: 79 RCKTWGYSGAEAFGGVTQQCNMPGGMGGCQRFLVTKEFQCTGTG 122 >UniRef50_B7LNZ3 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LNZ3_ESCF3 Length = 111 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 62/102 (60%), Positives = 77/102 (75%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 M+++ L+L L+TL+GCTVTRQAHVSE+D +VRL + Q LQ A TD YV++G+A+ A Sbjct: 1 MKIVFLSLILLTLSGCTVTRQAHVSEIDVPNAVVRLTWQQMILQDARTDPYVAQGLANNA 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA 102 C Q G+ AV +GQPV CSLFAGSLCLNT FTLSYQC S Sbjct: 61 CLQSGFGQAVAYGQPVATCSLFAGSLCLNTTFTLSYQCQPST 102 >UniRef50_A6VKB1 Putative lipoprotein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VKB1_ACTSZ Length = 101 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 2 RLLILTLSLITLAGCTVTRQAHV-SEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +LL+L + +L C ++ +V + A G++ L Y + + A + +A + Sbjct: 3 KLLMLICMVCSLTACVSEQKRYVATGGSRADGVINLSYQVRYNERAAPNPNQGLRLAQKR 62 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQC 98 C+Q GY +A F C++ G CL+ T+ YQC Sbjct: 63 CRQWGYQNAERFSGYTRRCNIAKGRKCLSYLITVQYQC 100 >UniRef50_A8G1K8 Putative lipoprotein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G1K8_SHESH Length = 101 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +++ + L+T++GC + +VRL Y+ L D +A Sbjct: 5 LKISLAAAVLLTVSGCATQNDWGAVGGSKSDAVVRLSYELGALDKHTPDESDGLKLAKLR 64 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQC 98 C G++ A PF C A C + T YQC Sbjct: 65 CGYWGFSGAKPFDVETKTC---ADEQCRSYTITKEYQC 99 >UniRef50_B0RRY4 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RRY4_XANCB Length = 108 Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 ++ ++ + C +++ A G++ L Y++ Q + +A++ Sbjct: 3 LKFCGAAAVVLLVGACATHADWLPTKMSRADGVIALSYERNEFQRTDLSEQQAIHLAEQK 62 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAG-SLCLNTEFTLSYQCHHS 101 C+ GY A PFG C G C + T+ +QC S Sbjct: 63 CRNWGYKGAEPFGSQSTECLSRRGFGNCGSRRVTVEFQCTGS 104 >UniRef50_Q0VRL9 Putative uncharacterized protein n=2 Tax=Alcanivorax RepID=Q0VRL9_ALCBS Length = 108 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 2/106 (1%) Query: 1 MRLLILTLSLITLAGCTVTRQA-HVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADR 59 + LI L+ +L C V++ + A G V L D + +Q+ D A Sbjct: 2 LTRLIAVLAFASLTACVTPASPIRVADGNQAEGSVTLATDYSLMQNPQIDWQQGLQKAST 61 Query: 60 ACQQEGYTHAVPFGQPVGNC-SLFAGSLCLNTEFTLSYQCHHSAFP 104 CQ GY A+P G+P C + C+ ++QC P Sbjct: 62 QCQGWGYNGAIPSGKPKRTCNNETQDGNCIGWTVNATFQCTGPNQP 107 >UniRef50_D0WAQ1 Putative lipoprotein n=1 Tax=Neisseria lactamica ATCC 23970 RepID=D0WAQ1_NEILA Length = 151 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 34/104 (32%), Gaps = 9/104 (8%) Query: 5 ILTLSLITLAGCTVT----RQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 L + + L GC V + + A G V L Y+Q F +A Sbjct: 4 YLLIVVCFLTGCGVRSVRLPEWQAIDGSHADGTVTLAYEQNFRSRLIPRIGQDNEVAKTR 63 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGS-----LCLNTEFTLSYQCH 99 C+ GY A FG +C CL F YQC Sbjct: 64 CRVWGYNSAEAFGGSTRSCVATPARANAKVPCLIWRFEKRYQCT 107 >UniRef50_B0TQR9 Putative lipoprotein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQR9_SHEHH Length = 117 Score = 108 bits (269), Expect = 6e-23, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 8/108 (7%) Query: 4 LILTLSLITLAGCTVTRQAHVSE---VDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 +T S+ GC + + + G++ + Y + + + + +A + Sbjct: 8 FFITTSVTVFTGCASAPKNFTLDTFSGSRSDGVIEMGYLGGYGWVKNVNWAATGELASQR 67 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAG-----SLCLNTEFTLSYQCHHSAF 103 C+ GY A FG C G +C ++T+ YQC Sbjct: 68 CRSWGYEDAERFGLGHAICIEDNGAGGAFKMCTTAKYTVEYQCTGKMI 115 >UniRef50_C0EL23 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EL23_NEIFL Length = 126 Score = 106 bits (264), Expect = 2e-22, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 31/78 (39%) Query: 24 VSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFA 83 A GIV++ YD A+ + +R S+ A + C GY+ A FG C Sbjct: 3 PISGSKADGIVKMAYDYAWFESPMINREASQEQAVKRCNAWGYSDAEAFGTSSKQCIENN 62 Query: 84 GSLCLNTEFTLSYQCHHS 101 G C YQC S Sbjct: 63 GFGCERFRVITEYQCTGS 80 >UniRef50_Q1I8D1 Putative uncharacterized protein n=2 Tax=Pseudomonas RepID=Q1I8D1_PSEE4 Length = 102 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%) Query: 15 GCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQ 74 GC +Q + G+V++ Y+Q + +D +A C+ GY +A G Sbjct: 17 GCATPKQWEATGGSKNDGLVQVSYEQGQFESGQSDAAQGLQVATARCKTWGYRNAEITGS 76 Query: 75 PVGNCSLFAGSLCLNTEFTLSYQCH 99 C CL T T Y C Sbjct: 77 EKSICRTMGQFNCLQTTVTQDYLCQ 101 >UniRef50_Q775B6 Bbp28 n=2 Tax=Bpp-1-like viruses RepID=Q775B6_9CAUD Length = 118 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 12/109 (11%) Query: 2 RLLILTLSLITLAGCTVTRQ---AHVSEVDAATGIVRLVYDQ-----AFLQHAHTDRYVS 53 + L++ + ++ LAGC + + A G V L D D + Sbjct: 5 KKLLIAIGVLFLAGCAAPMERANWVMVGGSKADGSVTLGIDVPAKYGVTETPVEWDINQA 64 Query: 54 RGIADRACQQEGYTHAVPF--GQP--VGNCSLFAGSLCLNTEFTLSYQC 98 ADR C+ GY+ A + GQ + C S C + + + YQC Sbjct: 65 NTEADRRCKNWGYSGADMYREGQFPILKTCHAQGVSPCWSKTYRVQYQC 113 >UniRef50_A4WBS4 Putative lipoprotein n=6 Tax=Enterobacteriaceae RepID=A4WBS4_ENT38 Length = 112 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 48/103 (46%), Positives = 66/103 (64%) Query: 1 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA 60 M+ L L +L+ LAGC VTRQA V+ D+ +G+VRL QA LQ++H D YV+ G A R Sbjct: 1 MKKLFLAGALLLLAGCNVTRQAQVNSADSTSGVVRLNMGQAILQNSHYDSYVTNGTATRE 60 Query: 61 CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAF 103 CQ GY A +GQP+ C++ +GS+CLN T+ Y+C A Sbjct: 61 CQAMGYATASAYGQPIKTCTVVSGSVCLNESVTIQYKCQGYAI 103 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.130 0.393 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 541,314,166 Number of Sequences: 3077464 Number of extensions: 16686176 Number of successful extensions: 60601 Number of sequences better than 1.0e-01: 14 Number of HSP's better than 0.1 without gapping: 34 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 60551 Number of HSP's gapped (non-prelim): 37 length of query: 107 length of database: 1,040,396,356 effective HSP length: 75 effective length of query: 32 effective length of database: 809,586,556 effective search space: 25906769792 effective search space used: 25906769792 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 87 (38.2 bits)